Query 022111
Match_columns 302
No_of_seqs 167 out of 2005
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 14:10:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022111.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022111hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pm7_B Protein transport prote 100.0 1.8E-47 6E-52 329.0 35.6 290 6-299 4-296 (297)
2 3bg1_A Protein SEC13 homolog; 100.0 6.6E-47 2.2E-51 328.3 32.3 293 5-299 7-304 (316)
3 2ynn_A Coatomer subunit beta'; 100.0 9.9E-42 3.4E-46 294.0 35.6 257 2-290 4-261 (304)
4 4gqb_B Methylosome protein 50; 100.0 1.8E-41 6E-46 297.7 34.3 248 9-288 80-331 (344)
5 3jrp_A Fusion protein of prote 100.0 4.3E-41 1.5E-45 296.3 36.4 292 4-299 4-298 (379)
6 3fm0_A Protein CIAO1; WDR39,SG 100.0 8.2E-41 2.8E-45 293.3 37.5 265 7-294 57-341 (345)
7 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.5E-40 5.1E-45 291.7 37.4 259 5-288 9-283 (345)
8 3ow8_A WD repeat-containing pr 100.0 1.5E-40 5.1E-45 289.0 34.3 248 7-289 28-280 (321)
9 1vyh_C Platelet-activating fac 100.0 1E-40 3.4E-45 299.5 33.4 254 4-290 101-371 (410)
10 3frx_A Guanine nucleotide-bind 100.0 1E-39 3.5E-44 283.3 35.8 253 5-288 11-267 (319)
11 2hes_X YDR267CP; beta-propelle 100.0 1.3E-39 4.3E-44 284.1 36.4 266 4-295 7-286 (330)
12 2hes_X YDR267CP; beta-propelle 100.0 8.3E-40 2.8E-44 285.2 35.0 257 9-287 56-327 (330)
13 3ow8_A WD repeat-containing pr 100.0 4.5E-40 1.5E-44 286.0 33.2 245 6-287 75-320 (321)
14 1got_B GT-beta; complex (GTP-b 100.0 1.1E-39 3.9E-44 285.5 35.3 254 3-290 47-303 (340)
15 1vyh_C Platelet-activating fac 100.0 3E-40 1E-44 296.5 31.2 259 5-286 144-409 (410)
16 4g56_B MGC81050 protein; prote 100.0 2.6E-40 8.9E-45 291.6 30.3 255 8-294 91-349 (357)
17 2ynn_A Coatomer subunit beta'; 100.0 1.3E-39 4.6E-44 280.7 32.9 251 6-288 50-302 (304)
18 2pbi_B Guanine nucleotide-bind 100.0 1.5E-39 5.2E-44 286.4 32.5 249 4-285 57-354 (354)
19 2xzm_R RACK1; ribosome, transl 100.0 4.1E-39 1.4E-43 282.1 34.3 260 5-288 15-285 (343)
20 3iz6_a 40S ribosomal protein R 100.0 1.2E-39 4.1E-44 289.6 25.6 260 5-292 60-333 (380)
21 3f3f_A Nucleoporin SEH1; struc 100.0 5.4E-38 1.8E-42 272.4 35.4 285 4-301 4-350 (351)
22 3dwl_C Actin-related protein 2 100.0 8.8E-40 3E-44 289.0 24.3 265 1-288 1-281 (377)
23 1nr0_A Actin interacting prote 100.0 5.3E-38 1.8E-42 295.5 36.0 270 6-290 185-569 (611)
24 1got_B GT-beta; complex (GTP-b 100.0 9.1E-38 3.1E-42 273.4 34.2 245 7-285 93-340 (340)
25 1nr0_A Actin interacting prote 100.0 3.7E-38 1.3E-42 296.6 33.3 251 5-288 53-355 (611)
26 3frx_A Guanine nucleotide-bind 100.0 1.8E-37 6.1E-42 269.2 33.3 248 6-288 60-317 (319)
27 3jro_A Fusion protein of prote 100.0 3E-38 1E-42 303.8 30.5 289 5-297 3-294 (753)
28 4gqb_B Methylosome protein 50; 100.0 1.8E-37 6.1E-42 272.2 31.4 251 8-288 27-289 (344)
29 3dm0_A Maltose-binding peripla 100.0 1.9E-37 6.5E-42 295.7 33.6 255 6-291 377-635 (694)
30 4e54_B DNA damage-binding prot 100.0 1.1E-37 3.8E-42 281.7 27.9 257 7-289 115-431 (435)
31 4g56_B MGC81050 protein; prote 100.0 3.7E-37 1.3E-41 271.4 29.9 252 8-288 39-301 (357)
32 2xzm_R RACK1; ribosome, transl 100.0 2.3E-36 7.8E-41 264.7 33.8 250 6-287 71-339 (343)
33 1erj_A Transcriptional repress 100.0 2.4E-36 8.2E-41 269.5 33.9 247 11-287 123-388 (393)
34 4ery_A WD repeat-containing pr 100.0 5.1E-36 1.7E-40 258.6 34.0 250 5-291 17-271 (312)
35 1erj_A Transcriptional repress 100.0 3.2E-36 1.1E-40 268.7 33.6 252 9-291 62-344 (393)
36 1k8k_C P40, ARP2/3 complex 41 100.0 1.5E-35 5.2E-40 260.5 36.5 265 6-296 3-283 (372)
37 3iz6_a 40S ribosomal protein R 100.0 2.2E-37 7.6E-42 275.0 24.7 254 6-288 103-375 (380)
38 4aow_A Guanine nucleotide-bind 100.0 1.5E-35 5.3E-40 257.4 35.8 251 5-288 32-286 (340)
39 2ymu_A WD-40 repeat protein; u 100.0 2.6E-36 8.7E-41 281.1 31.6 238 6-285 339-577 (577)
40 4ery_A WD repeat-containing pr 100.0 9.5E-36 3.2E-40 256.9 32.5 246 6-286 60-310 (312)
41 2ymu_A WD-40 repeat protein; u 100.0 9.3E-36 3.2E-40 277.3 32.9 256 4-287 9-292 (577)
42 4h5i_A Guanine nucleotide-exch 100.0 1.8E-35 6.3E-40 261.4 30.7 215 56-300 134-360 (365)
43 3dm0_A Maltose-binding peripla 100.0 6.7E-35 2.3E-39 278.1 30.0 251 6-287 425-692 (694)
44 1gxr_A ESG1, transducin-like e 100.0 1E-33 3.6E-38 245.2 34.6 240 9-286 95-335 (337)
45 3ei3_B DNA damage-binding prot 100.0 3.5E-34 1.2E-38 253.9 31.7 262 6-295 68-346 (383)
46 3zwl_B Eukaryotic translation 100.0 8E-34 2.7E-38 248.7 33.5 252 5-288 26-346 (369)
47 2j04_B YDR362CP, TAU91; beta p 100.0 1.8E-35 6.1E-40 272.7 24.0 249 7-287 203-516 (524)
48 3vl1_A 26S proteasome regulato 100.0 7E-34 2.4E-38 254.5 33.7 261 12-289 98-366 (420)
49 1k8k_C P40, ARP2/3 complex 41 100.0 9.5E-34 3.2E-38 249.1 33.8 256 5-288 46-361 (372)
50 3k26_A Polycomb protein EED; W 100.0 5.2E-35 1.8E-39 256.2 25.1 252 10-287 68-365 (366)
51 2pm9_A Protein WEB1, protein t 100.0 1.1E-34 3.8E-39 259.0 27.5 254 8-288 64-337 (416)
52 2xyi_A Probable histone-bindin 100.0 1.6E-34 5.3E-39 260.7 28.4 258 7-287 124-409 (430)
53 3dwl_C Actin-related protein 2 100.0 1.7E-34 5.8E-39 255.0 26.5 258 5-286 49-377 (377)
54 2j04_B YDR362CP, TAU91; beta p 100.0 3.9E-35 1.3E-39 270.4 22.5 234 25-287 175-427 (524)
55 3i2n_A WD repeat-containing pr 100.0 1.2E-33 4E-38 247.0 30.7 258 8-288 62-353 (357)
56 4aow_A Guanine nucleotide-bind 100.0 2.5E-33 8.5E-38 243.5 32.6 251 5-288 80-337 (340)
57 1sq9_A Antiviral protein SKI8; 100.0 6.3E-34 2.2E-38 252.7 29.3 262 4-295 9-329 (397)
58 4a11_B DNA excision repair pro 100.0 6.4E-33 2.2E-37 246.4 35.7 262 4-290 36-367 (408)
59 3dw8_B Serine/threonine-protei 100.0 1.4E-33 4.9E-38 254.3 31.7 259 9-290 26-375 (447)
60 4aez_A CDC20, WD repeat-contai 100.0 1.8E-33 6.3E-38 251.2 32.1 246 9-290 132-382 (401)
61 4gga_A P55CDC, cell division c 100.0 6E-33 2E-37 249.5 34.4 246 8-288 144-395 (420)
62 1gxr_A ESG1, transducin-like e 100.0 1.1E-32 3.8E-37 238.7 34.6 248 8-291 48-299 (337)
63 3vl1_A 26S proteasome regulato 100.0 1.2E-33 4.3E-38 252.8 29.5 250 6-287 134-418 (420)
64 2pbi_B Guanine nucleotide-bind 100.0 7.9E-34 2.7E-38 249.8 27.3 205 7-241 150-354 (354)
65 3bg1_A Protein SEC13 homolog; 100.0 4.3E-34 1.5E-38 247.6 25.0 225 6-244 52-293 (316)
66 3mkq_A Coatomer beta'-subunit; 100.0 3.6E-33 1.2E-37 269.8 33.8 256 2-290 4-261 (814)
67 2aq5_A Coronin-1A; WD40 repeat 100.0 2.6E-33 8.8E-38 250.2 30.3 260 6-297 76-350 (402)
68 3mmy_A MRNA export factor; mRN 100.0 2.5E-33 8.5E-38 245.5 29.4 255 5-279 33-336 (368)
69 4gq1_A NUP37; propeller, trans 100.0 1.6E-34 5.4E-39 257.8 21.9 252 10-287 88-388 (393)
70 1yfq_A Cell cycle arrest prote 100.0 4.2E-33 1.5E-37 242.4 29.9 253 1-290 1-284 (342)
71 3ei3_B DNA damage-binding prot 100.0 2E-33 6.7E-38 249.0 27.8 244 8-287 115-381 (383)
72 3odt_A Protein DOA1; ubiquitin 100.0 2.7E-32 9.4E-37 234.0 33.9 246 4-291 11-258 (313)
73 3v7d_B Cell division control p 100.0 2.6E-32 8.8E-37 247.8 35.2 249 4-291 114-384 (464)
74 2pm7_B Protein transport prote 100.0 8.9E-33 3E-37 237.2 29.9 224 5-245 47-286 (297)
75 1r5m_A SIR4-interacting protei 100.0 1.5E-32 5E-37 245.1 32.2 246 9-287 106-424 (425)
76 2pm9_A Protein WEB1, protein t 100.0 9.2E-34 3.2E-38 253.0 24.3 258 9-292 10-298 (416)
77 1sq9_A Antiviral protein SKI8; 100.0 4.8E-33 1.7E-37 247.0 28.4 251 5-288 56-395 (397)
78 3gre_A Serine/threonine-protei 100.0 7.8E-34 2.7E-38 255.9 23.4 259 8-290 60-361 (437)
79 3k26_A Polycomb protein EED; W 100.0 4.2E-33 1.4E-37 244.0 27.1 258 6-289 13-319 (366)
80 3sfz_A APAF-1, apoptotic pepti 100.0 1.3E-32 4.4E-37 277.4 34.0 251 6-287 610-912 (1249)
81 3i2n_A WD repeat-containing pr 100.0 7.4E-33 2.5E-37 241.9 28.1 259 6-288 13-291 (357)
82 1r5m_A SIR4-interacting protei 100.0 5.5E-32 1.9E-36 241.4 32.8 259 9-290 43-363 (425)
83 3odt_A Protein DOA1; ubiquitin 100.0 8.4E-32 2.9E-36 230.9 31.5 241 6-288 54-296 (313)
84 3v7d_B Cell division control p 100.0 1.1E-31 3.7E-36 243.7 33.3 246 6-289 157-422 (464)
85 3dw8_B Serine/threonine-protei 100.0 1.5E-32 5E-37 247.7 27.3 247 12-287 94-445 (447)
86 4ggc_A P55CDC, cell division c 100.0 2.5E-31 8.4E-36 228.7 33.7 248 8-288 64-315 (318)
87 4aez_A CDC20, WD repeat-contai 100.0 4E-31 1.4E-35 236.1 32.5 242 9-288 89-336 (401)
88 1p22_A F-BOX/WD-repeat protein 100.0 1.6E-31 5.4E-36 241.2 28.8 244 5-291 167-417 (435)
89 4e54_B DNA damage-binding prot 100.0 6.9E-32 2.3E-36 243.7 25.5 214 49-288 113-327 (435)
90 3sfz_A APAF-1, apoptotic pepti 100.0 2.7E-31 9.2E-36 267.8 31.5 268 6-288 652-1034(1249)
91 2aq5_A Coronin-1A; WD40 repeat 100.0 3.5E-31 1.2E-35 236.4 28.7 249 15-290 38-301 (402)
92 3mkq_A Coatomer beta'-subunit; 100.0 4.9E-31 1.7E-35 254.9 31.8 251 6-288 50-302 (814)
93 3gre_A Serine/threonine-protei 100.0 4E-31 1.4E-35 238.1 28.9 255 9-285 109-437 (437)
94 1p22_A F-BOX/WD-repeat protein 100.0 1.7E-30 5.7E-35 234.5 32.5 233 9-287 131-364 (435)
95 3jrp_A Fusion protein of prote 100.0 5.6E-30 1.9E-34 225.1 34.4 223 6-244 50-287 (379)
96 3lrv_A PRE-mRNA-splicing facto 100.0 1.6E-31 5.5E-36 233.8 24.2 240 19-294 44-299 (343)
97 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2E-30 6.7E-35 235.1 31.9 258 11-296 4-349 (450)
98 1pgu_A Actin interacting prote 100.0 1E-30 3.4E-35 244.5 30.7 252 8-291 15-286 (615)
99 4h5i_A Guanine nucleotide-exch 100.0 4.5E-31 1.5E-35 233.3 25.5 205 9-245 131-344 (365)
100 2oaj_A Protein SNI1; WD40 repe 100.0 6.5E-31 2.2E-35 256.9 29.0 245 7-286 13-310 (902)
101 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.9E-30 2E-34 231.9 32.8 258 8-293 99-397 (450)
102 4gga_A P55CDC, cell division c 100.0 2.7E-29 9.2E-34 225.6 35.2 245 13-291 107-356 (420)
103 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.9E-29 6.4E-34 228.1 33.6 241 4-292 111-352 (445)
104 1yfq_A Cell cycle arrest prote 100.0 2.1E-30 7.2E-35 225.3 26.0 239 7-280 52-314 (342)
105 1pgu_A Actin interacting prote 100.0 1E-29 3.5E-34 237.6 32.1 249 4-288 56-328 (615)
106 3vu4_A KMHSV2; beta-propeller 100.0 8E-30 2.8E-34 224.3 29.0 248 7-288 15-336 (355)
107 2j04_A TAU60, YPL007P, hypothe 100.0 9.6E-31 3.3E-35 238.0 23.3 239 10-287 14-296 (588)
108 2ovr_B FBW7, F-BOX/WD repeat p 100.0 7.8E-29 2.7E-33 224.0 34.8 242 6-293 154-396 (445)
109 2j04_A TAU60, YPL007P, hypothe 100.0 3.2E-30 1.1E-34 234.6 23.6 233 9-278 83-350 (588)
110 4ggc_A P55CDC, cell division c 100.0 3.5E-28 1.2E-32 209.0 34.4 246 14-291 28-276 (318)
111 2oaj_A Protein SNI1; WD40 repe 100.0 5.6E-30 1.9E-34 250.3 25.0 267 6-297 430-792 (902)
112 3f3f_A Nucleoporin SEH1; struc 100.0 4.9E-29 1.7E-33 215.9 28.0 224 7-245 53-338 (351)
113 3jro_A Fusion protein of prote 100.0 6.3E-29 2.1E-33 239.0 27.4 223 6-244 48-285 (753)
114 2xyi_A Probable histone-bindin 100.0 1.1E-28 3.8E-33 222.4 26.4 219 6-244 176-410 (430)
115 4a11_B DNA excision repair pro 100.0 4.3E-28 1.5E-32 215.2 28.8 248 8-287 96-404 (408)
116 2w18_A PALB2, fancn, partner a 100.0 5.3E-29 1.8E-33 213.9 20.5 203 10-242 110-355 (356)
117 3lrv_A PRE-mRNA-splicing facto 100.0 8.3E-28 2.8E-32 210.2 27.6 239 12-286 77-331 (343)
118 3zwl_B Eukaryotic translation 100.0 1.2E-26 4.1E-31 202.9 31.8 214 47-291 24-252 (369)
119 2w18_A PALB2, fancn, partner a 100.0 8.4E-27 2.9E-31 200.3 27.6 246 25-286 56-355 (356)
120 3mmy_A MRNA export factor; mRN 100.0 6.7E-27 2.3E-31 204.5 26.6 224 45-290 29-306 (368)
121 4gq1_A NUP37; propeller, trans 100.0 1.1E-27 3.7E-32 213.6 20.0 220 6-242 131-387 (393)
122 3bws_A Protein LP49; two-domai 99.9 3.1E-25 1.1E-29 199.1 29.2 241 7-287 165-431 (433)
123 1l0q_A Surface layer protein; 99.9 1E-23 3.4E-28 186.8 33.1 237 12-289 32-276 (391)
124 3vu4_A KMHSV2; beta-propeller 99.9 9.4E-25 3.2E-29 191.9 24.6 224 46-288 10-271 (355)
125 3bws_A Protein LP49; two-domai 99.9 1.3E-24 4.4E-29 195.1 25.5 238 12-288 123-390 (433)
126 1l0q_A Surface layer protein; 99.9 3E-23 1E-27 183.7 29.4 226 24-290 3-235 (391)
127 1ri6_A Putative isomerase YBHE 99.9 1.9E-22 6.5E-27 174.7 32.3 266 9-298 35-319 (343)
128 3hfq_A Uncharacterized protein 99.9 7.9E-22 2.7E-26 172.1 32.7 261 10-293 38-323 (347)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 5.4E-23 1.8E-27 184.5 24.2 238 7-287 113-386 (415)
130 2hqs_A Protein TOLB; TOLB, PAL 99.9 8.6E-22 2.9E-26 176.7 28.2 222 6-270 173-409 (415)
131 2ojh_A Uncharacterized protein 99.9 4.6E-22 1.6E-26 168.2 23.2 239 7-279 37-292 (297)
132 2oit_A Nucleoporin 214KDA; NH2 99.9 1.2E-21 4.2E-26 176.6 25.4 260 10-295 35-341 (434)
133 1nir_A Nitrite reductase; hemo 99.9 1E-20 3.5E-25 175.2 29.1 245 14-289 181-459 (543)
134 3scy_A Hypothetical bacterial 99.9 7.6E-19 2.6E-23 154.0 34.4 261 10-295 48-345 (361)
135 2ojh_A Uncharacterized protein 99.9 8.8E-20 3E-24 154.1 27.2 224 28-288 17-258 (297)
136 2ecf_A Dipeptidyl peptidase IV 99.9 7.9E-21 2.7E-25 182.0 22.9 245 11-291 36-370 (741)
137 2oit_A Nucleoporin 214KDA; NH2 99.9 5E-21 1.7E-25 172.7 18.4 205 56-288 37-278 (434)
138 1ri6_A Putative isomerase YBHE 99.9 1.3E-18 4.5E-23 150.4 30.4 243 25-295 7-270 (343)
139 3u4y_A Uncharacterized protein 99.9 4E-19 1.4E-23 153.5 27.1 250 10-288 39-304 (331)
140 1xfd_A DIP, dipeptidyl aminope 99.9 1.2E-20 4.1E-25 180.2 18.4 231 13-276 18-323 (723)
141 1nir_A Nitrite reductase; hemo 99.9 7.1E-19 2.4E-23 162.9 29.5 255 10-290 220-516 (543)
142 2ecf_A Dipeptidyl peptidase IV 99.9 6E-20 2.1E-24 175.8 22.2 242 13-290 110-415 (741)
143 3o4h_A Acylamino-acid-releasin 99.8 2.4E-20 8.2E-25 174.1 17.7 233 10-286 20-274 (582)
144 2z3z_A Dipeptidyl aminopeptida 99.8 1.4E-18 4.7E-23 165.6 27.0 245 9-288 118-435 (706)
145 1k32_A Tricorn protease; prote 99.8 4.8E-19 1.6E-23 176.0 24.2 231 13-287 246-501 (1045)
146 2z3z_A Dipeptidyl aminopeptida 99.8 5.1E-19 1.7E-23 168.6 23.3 238 12-286 82-387 (706)
147 1jof_A Carboxy-CIS,CIS-muconat 99.8 8E-18 2.7E-22 148.1 28.7 257 12-293 40-345 (365)
148 1xfd_A DIP, dipeptidyl aminope 99.8 9.4E-19 3.2E-23 167.0 24.3 252 7-290 53-395 (723)
149 3u4y_A Uncharacterized protein 99.8 8.7E-18 3E-22 145.1 28.1 245 17-292 3-255 (331)
150 3hfq_A Uncharacterized protein 99.8 3.5E-17 1.2E-21 142.6 30.5 240 31-296 14-279 (347)
151 1jmx_B Amine dehydrogenase; ox 99.8 4.9E-18 1.7E-22 147.3 24.7 243 16-295 4-332 (349)
152 3vgz_A Uncharacterized protein 99.8 2.4E-17 8.2E-22 143.3 28.3 245 10-289 39-304 (353)
153 1pby_B Quinohemoprotein amine 99.8 1E-17 3.5E-22 144.4 24.3 240 13-295 35-317 (337)
154 3vgz_A Uncharacterized protein 99.8 2.9E-17 9.9E-22 142.8 26.9 232 13-279 90-334 (353)
155 1k32_A Tricorn protease; prote 99.8 9.4E-18 3.2E-22 166.7 26.6 244 7-290 332-639 (1045)
156 1z68_A Fibroblast activation p 99.8 6.9E-18 2.3E-22 161.2 20.2 237 16-287 20-345 (719)
157 3o4h_A Acylamino-acid-releasin 99.8 3.6E-17 1.2E-21 152.6 20.9 229 9-286 61-311 (582)
158 3scy_A Hypothetical bacterial 99.8 2.1E-15 7.3E-20 132.0 30.5 249 22-296 12-300 (361)
159 4a5s_A Dipeptidyl peptidase 4 99.7 1.1E-16 3.7E-21 153.6 21.8 244 11-287 16-352 (740)
160 1q7f_A NHL, brain tumor CG1071 99.7 4.2E-14 1.4E-18 119.6 31.6 240 9-287 27-279 (286)
161 1z68_A Fibroblast activation p 99.7 4E-16 1.4E-20 148.9 19.9 238 13-288 61-391 (719)
162 1jof_A Carboxy-CIS,CIS-muconat 99.7 3.3E-14 1.1E-18 125.0 30.6 243 25-294 4-297 (365)
163 1pby_B Quinohemoprotein amine 99.7 4.3E-15 1.5E-19 127.9 22.4 225 24-288 2-269 (337)
164 3fvz_A Peptidyl-glycine alpha- 99.7 3.5E-14 1.2E-18 123.1 27.6 247 11-287 23-321 (329)
165 3pe7_A Oligogalacturonate lyas 99.7 2.9E-15 1E-19 132.0 19.3 240 17-294 41-334 (388)
166 3pe7_A Oligogalacturonate lyas 99.7 1.2E-15 4E-20 134.6 16.0 246 7-287 76-381 (388)
167 3azo_A Aminopeptidase; POP fam 99.6 5.2E-14 1.8E-18 133.0 25.0 244 16-295 81-375 (662)
168 3azo_A Aminopeptidase; POP fam 99.6 2E-14 7E-19 135.8 21.9 256 7-293 19-329 (662)
169 3e5z_A Putative gluconolactona 99.6 4.2E-13 1.5E-17 114.1 26.5 241 9-287 25-285 (296)
170 4a5s_A Dipeptidyl peptidase 4 99.6 1.8E-13 6.2E-18 131.2 25.0 244 15-291 65-401 (740)
171 2xdw_A Prolyl endopeptidase; a 99.6 1.7E-12 5.8E-17 123.9 31.1 252 8-288 121-414 (710)
172 1jmx_B Amine dehydrogenase; ox 99.6 6.7E-14 2.3E-18 121.1 18.7 210 13-245 44-326 (349)
173 2gop_A Trilobed protease; beta 99.6 3.8E-12 1.3E-16 110.3 28.4 228 13-296 60-337 (347)
174 2dg1_A DRP35, lactonase; beta 99.6 2.2E-11 7.4E-16 105.1 31.6 240 9-279 42-300 (333)
175 2bkl_A Prolyl endopeptidase; m 99.6 1.4E-12 4.7E-17 124.3 25.6 255 8-295 117-403 (695)
176 3c5m_A Oligogalacturonate lyas 99.5 6.5E-14 2.2E-18 123.4 13.2 231 16-288 85-382 (396)
177 2dg1_A DRP35, lactonase; beta 99.5 3.4E-12 1.2E-16 110.2 23.2 241 12-286 6-261 (333)
178 1rwi_B Serine/threonine-protei 99.5 9.9E-12 3.4E-16 103.8 24.7 239 13-290 25-266 (270)
179 3c5m_A Oligogalacturonate lyas 99.5 2.6E-13 8.9E-18 119.5 15.4 233 13-287 37-328 (396)
180 2gop_A Trilobed protease; beta 99.5 2.4E-11 8.3E-16 105.2 24.3 224 12-294 15-296 (347)
181 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 2.5E-10 8.4E-15 97.3 30.1 248 11-290 17-301 (314)
182 2oiz_A Aromatic amine dehydrog 99.5 1.5E-10 5.1E-15 101.5 28.1 245 21-288 13-334 (361)
183 2z2n_A Virginiamycin B lyase; 99.4 1.7E-09 5.9E-14 91.1 33.6 248 9-295 12-260 (299)
184 3fvz_A Peptidyl-glycine alpha- 99.4 3.5E-11 1.2E-15 104.1 22.6 209 11-244 90-322 (329)
185 1q7f_A NHL, brain tumor CG1071 99.4 1.1E-10 3.6E-15 98.6 25.1 198 9-244 74-280 (286)
186 2oiz_A Aromatic amine dehydrog 99.4 7.1E-11 2.4E-15 103.6 23.4 234 16-271 54-360 (361)
187 1yr2_A Prolyl oligopeptidase; 99.4 1.7E-10 5.9E-15 110.6 27.7 253 9-295 160-447 (741)
188 2xdw_A Prolyl endopeptidase; a 99.4 2.2E-10 7.6E-15 109.2 26.1 235 21-286 81-366 (710)
189 2z2n_A Virginiamycin B lyase; 99.4 6.8E-09 2.3E-13 87.4 32.3 239 11-287 56-294 (299)
190 3no2_A Uncharacterized protein 99.4 3.2E-10 1.1E-14 95.7 23.8 232 22-291 4-254 (276)
191 2bkl_A Prolyl endopeptidase; m 99.3 2E-10 6.9E-15 109.3 23.6 239 20-291 76-352 (695)
192 3e5z_A Putative gluconolactona 99.3 5.1E-10 1.7E-14 94.9 23.1 206 49-287 21-245 (296)
193 1xip_A Nucleoporin NUP159; bet 99.3 1.2E-10 4.1E-15 102.5 16.8 177 57-276 39-231 (388)
194 2qc5_A Streptogramin B lactona 99.3 5.5E-08 1.9E-12 81.8 32.9 246 11-295 19-265 (300)
195 3hrp_A Uncharacterized protein 99.3 8.2E-09 2.8E-13 92.0 28.6 237 13-285 132-407 (409)
196 1xip_A Nucleoporin NUP159; bet 99.3 2.2E-10 7.6E-15 100.8 17.9 177 13-231 39-231 (388)
197 1qks_A Cytochrome CD1 nitrite 99.3 2.2E-08 7.4E-13 92.8 30.7 250 13-289 198-478 (567)
198 3iuj_A Prolyl endopeptidase; h 99.2 1.9E-09 6.4E-14 102.6 24.1 253 7-296 124-412 (693)
199 3dsm_A Uncharacterized protein 99.2 1.5E-08 5.2E-13 87.4 26.9 234 13-287 45-301 (328)
200 3g4e_A Regucalcin; six bladed 99.2 3.4E-08 1.2E-12 83.9 28.6 234 10-277 11-260 (297)
201 2qc5_A Streptogramin B lactona 99.2 1.6E-07 5.4E-12 79.0 29.8 237 12-286 62-298 (300)
202 1rwi_B Serine/threonine-protei 99.2 5.4E-09 1.9E-13 87.0 20.1 197 12-244 67-264 (270)
203 1yr2_A Prolyl oligopeptidase; 99.1 1.3E-08 4.4E-13 97.6 24.5 239 20-290 115-395 (741)
204 3no2_A Uncharacterized protein 99.1 5.8E-09 2E-13 87.9 19.0 185 69-287 5-194 (276)
205 2ghs_A AGR_C_1268P; regucalcin 99.1 2.8E-07 9.5E-12 79.4 29.1 228 14-277 51-290 (326)
206 1qks_A Cytochrome CD1 nitrite 99.1 6.7E-08 2.3E-12 89.5 26.2 236 20-288 164-421 (567)
207 3dr2_A Exported gluconolactona 99.1 9.7E-08 3.3E-12 81.3 24.0 233 11-285 44-303 (305)
208 3dsm_A Uncharacterized protein 99.1 6.8E-08 2.3E-12 83.3 23.0 217 31-287 15-252 (328)
209 2qe8_A Uncharacterized protein 99.0 2.6E-07 8.8E-12 80.1 25.2 239 12-284 17-317 (343)
210 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 1.1E-07 3.9E-12 80.6 21.9 201 10-244 69-299 (314)
211 2mad_H Methylamine dehydrogena 98.9 5.6E-06 1.9E-10 72.6 29.8 239 16-291 70-353 (373)
212 3hrp_A Uncharacterized protein 98.9 7.7E-07 2.6E-11 79.2 23.5 204 57-286 132-352 (409)
213 3g4e_A Regucalcin; six bladed 98.8 9.9E-06 3.4E-10 68.5 28.0 198 58-287 15-228 (297)
214 3sjl_D Methylamine dehydrogena 98.8 3.2E-06 1.1E-10 74.1 24.2 246 16-298 82-373 (386)
215 2ece_A 462AA long hypothetical 98.8 3.9E-06 1.3E-10 74.5 24.4 230 21-277 93-399 (462)
216 3iuj_A Prolyl endopeptidase; h 98.8 4.6E-07 1.6E-11 86.1 19.2 201 53-287 126-358 (693)
217 3dr2_A Exported gluconolactona 98.7 2.9E-06 9.8E-11 72.1 21.1 201 49-286 38-265 (305)
218 2ghs_A AGR_C_1268P; regucalcin 98.7 3.1E-05 1.1E-09 66.4 26.0 195 59-286 52-258 (326)
219 2mad_H Methylamine dehydrogena 98.6 0.00017 5.7E-09 63.2 29.6 233 18-289 27-308 (373)
220 3c75_H MADH, methylamine dehyd 98.6 1.2E-05 4E-10 71.7 22.0 239 16-291 122-405 (426)
221 2hz6_A Endoplasmic reticulum t 98.5 1.9E-07 6.5E-12 81.9 7.8 186 69-294 9-199 (369)
222 2hz6_A Endoplasmic reticulum t 98.5 1E-07 3.5E-12 83.7 5.6 205 22-272 8-217 (369)
223 2qe8_A Uncharacterized protein 98.5 2.3E-05 7.8E-10 67.8 19.5 211 56-294 17-283 (343)
224 3sjl_D Methylamine dehydrogena 98.4 9.8E-05 3.3E-09 64.7 22.2 239 17-291 38-323 (386)
225 1mda_H Methylamine dehydrogena 98.4 3.3E-05 1.1E-09 67.5 19.2 90 34-134 47-157 (368)
226 3c75_H MADH, methylamine dehyd 98.2 0.00029 1E-08 62.6 21.1 237 21-292 82-363 (426)
227 2iwa_A Glutamine cyclotransfer 98.2 0.00044 1.5E-08 57.4 20.3 199 14-244 23-237 (266)
228 2ece_A 462AA long hypothetical 98.1 0.00025 8.5E-09 63.0 18.2 195 70-291 97-355 (462)
229 1kb0_A Quinohemoprotein alcoho 98.1 0.00073 2.5E-08 63.9 22.1 57 235-295 457-514 (677)
230 1mda_H Methylamine dehydrogena 98.0 0.0003 1E-08 61.4 17.3 69 16-88 69-158 (368)
231 1k3i_A Galactose oxidase precu 98.0 0.0021 7.1E-08 60.5 23.6 254 16-296 190-504 (656)
232 1fwx_A Nitrous oxide reductase 97.9 0.0017 5.7E-08 59.7 20.6 248 22-287 100-430 (595)
233 2xe4_A Oligopeptidase B; hydro 97.9 0.01 3.6E-07 56.7 26.9 118 9-135 170-304 (751)
234 1yiq_A Quinohemoprotein alcoho 97.8 0.0028 9.5E-08 60.1 21.4 54 234-291 454-508 (689)
235 2xbg_A YCF48-like protein; pho 97.8 0.011 3.9E-07 50.4 26.8 237 11-285 79-319 (327)
236 1yiq_A Quinohemoprotein alcoho 97.8 0.0035 1.2E-07 59.4 20.8 80 184-274 454-533 (689)
237 3hxj_A Pyrrolo-quinoline quino 97.7 0.0038 1.3E-07 52.7 18.9 215 23-286 107-322 (330)
238 1k3i_A Galactose oxidase precu 97.7 0.0044 1.5E-07 58.3 20.7 235 16-278 247-530 (656)
239 2fp8_A Strictosidine synthase; 97.7 0.016 5.3E-07 49.1 23.6 241 13-287 20-312 (322)
240 2xbg_A YCF48-like protein; pho 97.7 0.017 5.9E-07 49.2 27.7 247 11-297 35-287 (327)
241 3nol_A Glutamine cyclotransfer 97.7 0.004 1.4E-07 51.2 17.1 186 14-231 45-243 (262)
242 2xe4_A Oligopeptidase B; hydro 97.6 0.0056 1.9E-07 58.6 20.2 158 57-243 175-351 (751)
243 1npe_A Nidogen, entactin; glyc 97.6 0.018 6.2E-07 47.2 26.9 224 13-271 37-263 (267)
244 3nol_A Glutamine cyclotransfer 97.6 0.019 6.6E-07 47.2 21.6 188 58-279 45-245 (262)
245 1npe_A Nidogen, entactin; glyc 97.6 0.02 7E-07 46.9 29.6 229 25-288 3-238 (267)
246 3nok_A Glutaminyl cyclase; bet 97.6 0.02 7E-07 47.1 19.8 183 15-231 58-253 (268)
247 3q7m_A Lipoprotein YFGL, BAMB; 97.5 0.034 1.2E-06 48.0 24.8 226 23-288 103-337 (376)
248 3qqz_A Putative uncharacterize 97.5 0.027 9.4E-07 46.2 27.8 210 50-285 21-250 (255)
249 1kb0_A Quinohemoprotein alcoho 97.5 0.0092 3.2E-07 56.4 18.6 79 185-274 457-535 (677)
250 3q7m_A Lipoprotein YFGL, BAMB; 97.4 0.053 1.8E-06 46.7 27.2 238 23-294 53-303 (376)
251 3hxj_A Pyrrolo-quinoline quino 97.4 0.0058 2E-07 51.5 15.0 221 13-286 61-282 (330)
252 3mbr_X Glutamine cyclotransfer 97.4 0.04 1.4E-06 44.8 19.4 190 9-231 16-222 (243)
253 2p4o_A Hypothetical protein; p 97.4 0.051 1.8E-06 45.6 26.7 232 12-278 32-277 (306)
254 2iwa_A Glutamine cyclotransfer 97.3 0.052 1.8E-06 44.8 20.7 193 58-286 23-235 (266)
255 4a2l_A BT_4663, two-component 97.3 0.14 4.9E-06 49.0 31.3 239 11-287 356-613 (795)
256 3nok_A Glutaminyl cyclase; bet 97.3 0.058 2E-06 44.4 19.1 185 57-279 56-255 (268)
257 3tc9_A Hypothetical hydrolase; 97.1 0.13 4.4E-06 45.6 24.5 155 14-194 139-301 (430)
258 2p4o_A Hypothetical protein; p 97.1 0.095 3.2E-06 43.9 26.2 215 46-294 23-246 (306)
259 4a2l_A BT_4663, two-component 97.1 0.24 8E-06 47.5 29.7 247 11-295 309-577 (795)
260 1kv9_A Type II quinohemoprotei 96.9 0.07 2.4E-06 50.2 18.1 55 233-291 436-491 (668)
261 3v65_B Low-density lipoprotein 96.7 0.27 9.4E-06 42.8 28.5 220 31-285 94-315 (386)
262 3mbr_X Glutamine cyclotransfer 96.7 0.2 6.8E-06 40.7 20.5 189 53-279 16-224 (243)
263 3v9f_A Two-component system se 96.6 0.53 1.8E-05 44.9 26.6 239 10-287 311-567 (781)
264 3qqz_A Putative uncharacterize 96.5 0.27 9.3E-06 40.2 26.9 206 9-240 24-249 (255)
265 4hw6_A Hypothetical protein, I 96.5 0.42 1.4E-05 42.4 25.7 202 14-242 141-372 (433)
266 2g8s_A Glucose/sorbosone dehyd 96.4 0.4 1.4E-05 41.2 24.1 76 211-286 272-350 (353)
267 2ism_A Putative oxidoreductase 96.3 0.45 1.5E-05 40.8 27.9 104 13-121 32-151 (352)
268 3v9f_A Two-component system se 96.2 0.87 3E-05 43.4 28.1 249 11-294 257-529 (781)
269 4hw6_A Hypothetical protein, I 96.2 0.61 2.1E-05 41.3 20.9 159 58-243 141-303 (433)
270 1fwx_A Nitrous oxide reductase 96.0 0.93 3.2E-05 41.7 20.5 74 212-288 279-361 (595)
271 3v64_C Agrin; beta propeller, 96.0 0.65 2.2E-05 39.7 31.4 234 14-285 36-272 (349)
272 2fp8_A Strictosidine synthase; 95.8 0.73 2.5E-05 38.6 22.3 114 13-134 81-215 (322)
273 3v64_C Agrin; beta propeller, 95.8 0.82 2.8E-05 39.1 23.4 179 78-287 52-233 (349)
274 2xn4_A Kelch-like protein 2; s 95.7 0.71 2.4E-05 38.2 22.8 234 22-296 15-283 (302)
275 3v65_B Low-density lipoprotein 95.6 0.99 3.4E-05 39.2 22.8 198 13-242 117-316 (386)
276 3a9g_A Putative uncharacterize 95.6 0.93 3.2E-05 38.9 27.9 104 13-121 30-151 (354)
277 3sre_A PON1, serum paraoxonase 95.5 1.1 3.6E-05 38.6 21.1 102 184-293 138-257 (355)
278 3pbp_A Nucleoporin NUP82; beta 95.5 0.96 3.3E-05 39.8 16.3 105 151-271 67-192 (452)
279 2p9w_A MAL S 1 allergenic prot 95.3 1.1 3.9E-05 37.9 16.2 168 98-288 8-215 (334)
280 2vpj_A Kelch-like protein 12; 95.2 1.1 3.6E-05 37.1 24.1 239 21-297 13-286 (301)
281 3pbp_A Nucleoporin NUP82; beta 95.2 1.5 5.2E-05 38.6 17.4 153 69-239 32-207 (452)
282 3kya_A Putative phosphatase; s 95.1 1.8 6.3E-05 38.9 20.3 163 58-244 141-341 (496)
283 3tc9_A Hypothetical hydrolase; 95.0 1.7 5.8E-05 38.3 23.2 155 59-244 140-301 (430)
284 1n7d_A LDL receptor, low-densi 94.9 0.29 9.9E-06 46.3 12.2 186 31-244 384-571 (699)
285 3m0c_C LDL receptor, low-densi 94.7 3.1 0.00011 39.9 26.4 216 31-279 402-621 (791)
286 3sov_A LRP-6, low-density lipo 94.7 1.7 5.9E-05 36.6 26.1 223 32-286 12-236 (318)
287 3p5b_L Low density lipoprotein 94.5 2.2 7.5E-05 37.2 28.1 192 25-245 85-278 (400)
288 3ii7_A Kelch-like protein 7; p 94.5 1.7 6E-05 35.9 24.6 233 23-297 12-280 (306)
289 1n7d_A LDL receptor, low-densi 94.4 0.52 1.8E-05 44.6 12.9 202 14-243 408-613 (699)
290 1kv9_A Type II quinohemoprotei 94.4 2.7 9.2E-05 39.4 17.7 61 70-137 67-138 (668)
291 3ei3_A DNA damage-binding prot 94.1 5.5 0.00019 40.0 27.8 76 11-87 553-635 (1158)
292 2xn4_A Kelch-like protein 2; s 94.0 2.2 7.5E-05 35.2 19.3 151 22-198 61-233 (302)
293 1zgk_A Kelch-like ECH-associat 94.0 2.3 7.8E-05 35.3 24.2 237 20-298 22-296 (308)
294 3sre_A PON1, serum paraoxonase 93.8 2.9 9.8E-05 35.9 24.4 65 211-279 222-287 (355)
295 3ii7_A Kelch-like protein 7; p 93.6 2.6 9.1E-05 34.7 19.9 189 22-244 55-272 (306)
296 2ad6_A Methanol dehydrogenase 92.9 5.6 0.00019 36.4 23.5 55 233-291 442-497 (571)
297 3amr_A 3-phytase; beta-propell 92.8 4.2 0.00014 34.8 24.7 190 71-287 42-262 (355)
298 1ijq_A LDL receptor, low-densi 92.8 3.8 0.00013 34.2 29.3 223 32-286 9-236 (316)
299 2vpj_A Kelch-like protein 12; 92.7 3.6 0.00012 33.7 21.5 151 22-198 62-235 (301)
300 2ad6_A Methanol dehydrogenase 92.4 6.4 0.00022 36.1 20.2 49 226-276 476-524 (571)
301 2p9w_A MAL S 1 allergenic prot 92.4 4.5 0.00016 34.3 19.0 161 59-244 16-215 (334)
302 3m0c_C LDL receptor, low-densi 92.4 8 0.00027 37.1 27.5 201 13-242 425-630 (791)
303 1flg_A Protein (quinoprotein e 92.4 5.2 0.00018 36.8 15.8 22 175-196 497-518 (582)
304 1w6s_A Methanol dehydrogenase 92.4 6.8 0.00023 36.2 20.7 49 226-276 485-534 (599)
305 1ijq_A LDL receptor, low-densi 92.2 4.5 0.00015 33.7 26.4 203 13-243 31-237 (316)
306 3kya_A Putative phosphatase; s 92.1 6.4 0.00022 35.4 28.3 161 13-194 140-341 (496)
307 3p5b_L Low density lipoprotein 92.1 5.6 0.00019 34.6 27.7 204 12-243 112-319 (400)
308 4asc_A Kelch repeat and BTB do 91.5 5.2 0.00018 33.1 23.6 108 175-295 149-283 (315)
309 4asc_A Kelch repeat and BTB do 91.0 5.9 0.0002 32.7 15.2 104 22-134 98-220 (315)
310 3sov_A LRP-6, low-density lipo 90.8 6.6 0.00023 32.9 23.3 198 14-243 37-237 (318)
311 1zgk_A Kelch-like ECH-associat 90.2 6.9 0.00023 32.3 18.0 151 22-198 70-244 (308)
312 1cru_A Protein (soluble quinop 90.1 9.7 0.00033 33.7 18.9 56 102-160 26-87 (454)
313 3a9g_A Putative uncharacterize 89.5 5.5 0.00019 33.9 12.3 110 152-277 31-153 (354)
314 2ism_A Putative oxidoreductase 89.3 8.9 0.0003 32.6 13.4 109 152-277 33-153 (352)
315 1w6s_A Methanol dehydrogenase 89.0 14 0.00048 34.1 22.3 21 176-196 324-344 (599)
316 2woz_A Kelch repeat and BTB do 88.8 9.1 0.00031 31.6 15.6 104 22-134 109-230 (318)
317 1flg_A Protein (quinoprotein e 88.7 14 0.00049 33.8 22.7 54 234-291 465-519 (582)
318 2uvk_A YJHT; unknown function, 87.9 11 0.00038 31.6 19.7 96 22-125 19-128 (357)
319 3das_A Putative oxidoreductase 87.3 13 0.00044 31.7 28.0 108 13-122 33-157 (347)
320 3amr_A 3-phytase; beta-propell 86.4 15 0.0005 31.4 23.0 195 23-243 40-262 (355)
321 1tl2_A L10, protein (tachylect 84.6 6.4 0.00022 31.4 8.8 104 13-128 42-156 (236)
322 3b7f_A Glycosyl hydrolase, BNR 83.3 21 0.00071 30.6 25.1 83 210-297 278-380 (394)
323 2g8s_A Glucose/sorbosone dehyd 80.1 26 0.00089 29.6 14.6 27 104-132 19-45 (353)
324 3s94_A LRP-6, low-density lipo 76.3 48 0.0016 30.6 23.2 161 13-194 41-202 (619)
325 1bpo_A Protein (clathrin); cla 76.3 41 0.0014 29.8 19.0 187 32-237 124-324 (494)
326 2woz_A Kelch repeat and BTB do 73.3 37 0.0013 27.8 24.2 104 175-295 159-293 (318)
327 4a0p_A LRP6, LRP-6, low-densit 72.4 61 0.0021 30.0 29.2 220 31-286 13-235 (628)
328 2wg3_C Hedgehog-interacting pr 71.9 53 0.0018 29.1 12.3 64 13-76 15-91 (463)
329 2uvk_A YJHT; unknown function, 71.5 43 0.0015 27.9 18.3 53 22-78 65-128 (357)
330 2zwa_A Leucine carboxyl methyl 71.5 67 0.0023 30.0 15.9 110 22-136 451-578 (695)
331 2xzh_A Clathrin heavy chain 1; 69.5 52 0.0018 28.0 20.6 160 24-195 118-291 (365)
332 2wg3_C Hedgehog-interacting pr 66.0 58 0.002 28.8 10.9 19 260-278 140-158 (463)
333 2zwa_A Leucine carboxyl methyl 65.9 88 0.003 29.2 22.1 113 21-140 396-526 (695)
334 1sqj_A OXG-RCBH, oligoxylogluc 63.2 1.1E+02 0.0036 29.2 21.3 58 55-114 14-75 (789)
335 1xi4_A Clathrin heavy chain; a 62.2 1.1E+02 0.0039 31.6 12.8 153 32-195 124-290 (1630)
336 1sqj_A OXG-RCBH, oligoxylogluc 60.3 1.2E+02 0.004 28.9 24.8 146 11-160 14-179 (789)
337 4gq2_M Nucleoporin NUP120; bet 59.2 32 0.0011 33.7 8.5 31 211-245 237-267 (950)
338 4a0p_A LRP6, LRP-6, low-densit 59.1 1.1E+02 0.0038 28.2 24.5 157 13-194 38-197 (628)
339 3das_A Putative oxidoreductase 57.3 88 0.003 26.5 14.3 77 55-134 31-115 (347)
340 3a0f_A Xyloglucanase; beta-pro 53.4 1.1E+02 0.0037 29.0 11.0 86 208-298 19-122 (763)
341 1cru_A Protein (soluble quinop 53.0 1.2E+02 0.0041 26.6 31.8 110 13-123 28-163 (454)
342 3ei3_A DNA damage-binding prot 47.2 2.3E+02 0.008 28.4 30.1 116 13-134 515-635 (1158)
343 2cn3_A Xyloglucanase, beta-1,4 46.4 1.9E+02 0.0065 27.1 21.6 222 57-296 24-290 (737)
344 3b7f_A Glycosyl hydrolase, BNR 42.6 1.5E+02 0.0052 24.9 28.6 80 211-297 233-330 (394)
345 3sbq_A Nitrous-oxide reductase 41.0 1.1E+02 0.0037 28.2 8.2 72 14-88 325-408 (638)
346 4fhn_B Nucleoporin NUP120; pro 39.4 39 0.0013 33.8 5.7 30 212-245 240-269 (1139)
347 4gq2_M Nucleoporin NUP120; bet 37.9 1.9E+02 0.0065 28.2 10.2 31 13-43 237-267 (950)
348 1tl2_A L10, protein (tachylect 37.2 1.6E+02 0.0053 23.4 12.8 62 213-281 91-156 (236)
349 3f7f_A Nucleoporin NUP120; nuc 33.1 2.2E+02 0.0076 26.8 9.2 31 12-44 222-252 (729)
350 3f7f_A Nucleoporin NUP120; nuc 26.8 1.1E+02 0.0037 28.9 6.0 29 57-89 223-251 (729)
351 3zwu_A Alkaline phosphatase PH 24.9 2.6E+02 0.0089 25.6 8.1 20 257-276 529-548 (592)
352 3a0f_A Xyloglucanase; beta-pro 23.6 4.6E+02 0.016 24.6 25.2 87 54-142 19-119 (763)
353 2cn3_A Xyloglucanase, beta-1,4 22.6 4.7E+02 0.016 24.4 27.1 110 13-123 24-151 (737)
354 4a9v_A PHOX; hydrolase, beta-p 21.9 4E+02 0.014 24.4 8.6 19 258-276 530-548 (592)
No 1
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.8e-47 Score=328.97 Aligned_cols=290 Identities=46% Similarity=0.838 Sum_probs=226.2
Q ss_pred cccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
++.+|.+.|++++|+|+|++||+|+.|++|+||++.....+.+.++.+|.+.|++++|+++.++++|+||+.|++|++||
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 46799999999999999999999999999999999754445677899999999999998654578999999999999999
Q ss_pred cCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCc
Q 022111 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 165 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 165 (302)
++++. +.....+.+|...|.+++|+|+..+.+|++|+.|++|++||++.........+ .+|...|.+++|+|+.....
T Consensus 84 ~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 84 EENGR-WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIII-DAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp BSSSC-BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEE-ECCSSCEEEEEECCCC----
T ss_pred cCCCc-eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeee-ecccCccceEeecCCccccc
Confidence 97642 23455677899999999999975467899999999999999975433222333 37889999999999642110
Q ss_pred eeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccC
Q 022111 166 LVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKE 245 (302)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~ 245 (302)
.. .....++.+|++|+.|++|+|||++++.....+...+.+|.++|++++|+|++ ..+.+||+++.|++|+|||++..
T Consensus 162 ~~-~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~-~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 162 GE-HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV-LLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ---------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC-SSSEEEEEEETTSCEEEEEESST
T ss_pred cc-CCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCC-CCceEEEEEECCCcEEEEEeCCC
Confidence 00 00011246899999999999999987643333456788999999999999984 12378999999999999999764
Q ss_pred Ccceeeeee--ccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCceEEEeeecC
Q 022111 246 GEQWEGRVL--KDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQVSVVE 299 (302)
Q Consensus 246 ~~~~~~~~~--~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~~~~~~~~~ 299 (302)
...+....+ ..+...|++++|+|+|++||+++.| .|+||+...+|.|++...++
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g~w~~~~~~~ 296 (297)
T 2pm7_B 240 QGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGEVH 296 (297)
T ss_dssp TSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEC----
T ss_pred CCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCCcEEeccccc
Confidence 322222233 4567889999999999999999988 79999998889999987764
No 2
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=6.6e-47 Score=328.27 Aligned_cols=293 Identities=53% Similarity=1.018 Sum_probs=226.6
Q ss_pred ccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEE
Q 022111 5 KIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIW 84 (302)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iw 84 (302)
.++.+|++.|++++|+++|++||+|+.|++|+|||+..+....+..+.+|.+.|++++|+++.++++|+||+.|++|++|
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 34679999999999999999999999999999999976543456788999999999999865447899999999999999
Q ss_pred EcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCC
Q 022111 85 KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPG 164 (302)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 164 (302)
|++++. +.....+.+|...|.+++|+|+..+.+|++|+.|++|++|++.....+.......+|...+.++.|+|+..++
T Consensus 87 d~~~~~-~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 165 (316)
T 3bg1_A 87 REENGT-WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPG 165 (316)
T ss_dssp CCSSSC-CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-
T ss_pred ECCCCc-ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCc
Confidence 987642 2356678889999999999998657789999999999999997654443333334788899999999975433
Q ss_pred ceeeccc---CCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEE
Q 022111 165 ALVGLGL---LDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWT 241 (302)
Q Consensus 165 ~~~~~~~---~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd 241 (302)
.+..... ...+.+|++|+.|++|+|||+.... ...+...+.+|.++|++++|+|++..++..|++++.|++|+||+
T Consensus 166 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~-~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~ 244 (316)
T 3bg1_A 166 SLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDG-QWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244 (316)
T ss_dssp -----CCSCCCCCCCBEECCBTTSBCCEEEECTTS-CEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred cccccccccCccccceEEEecCCCeEEEEEeCCCC-ccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence 2211110 0124689999999999999996431 11244578899999999999998643347899999999999999
Q ss_pred eccCC-cceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCceEEEeeecC
Q 022111 242 CAKEG-EQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQVSVVE 299 (302)
Q Consensus 242 ~~~~~-~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~~~~~~~~~ 299 (302)
++... ..+....+..|...|++++|+|+|++||+++.| .|+||+....|.|++...+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~~~~~ 304 (316)
T 3bg1_A 245 CDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDVN 304 (316)
T ss_dssp CSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEEEECC
T ss_pred ccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEeeecc
Confidence 87521 112223445678899999999999999999988 79999998889999987765
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9.9e-42 Score=294.02 Aligned_cols=257 Identities=17% Similarity=0.204 Sum_probs=213.1
Q ss_pred CCcccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeE
Q 022111 2 PAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQV 81 (302)
Q Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i 81 (302)
..++++.+|.+.|++++|+|++++|++|+.|++|+|||+.. ...+..+.+|..+|.+++|+++ +++|++|+.|++|
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~s~d~~i 79 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYET--QVEVRSIQVTETPVRAGKFIAR--KNWIIVGSDDFRI 79 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEEEGG--GTEEEEEETTSEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC--CceeEEeeccCCcEEEEEEeCC--CCEEEEECCCCEE
Confidence 34567889999999999999999999999999999999865 4567788899999999999874 7899999999999
Q ss_pred EEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCC
Q 022111 82 IIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAM 161 (302)
Q Consensus 82 ~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 161 (302)
++||++++. .+..+.+|.+.|.+++|+|+ +.+|++|+.|++|++||++.... ......+|...|.+++|+|..
T Consensus 80 ~vwd~~~~~---~~~~~~~h~~~v~~~~~~~~--~~~l~sgs~D~~v~lWd~~~~~~--~~~~~~~h~~~v~~v~~~p~~ 152 (304)
T 2ynn_A 80 RVFNYNTGE---KVVDFEAHPDYIRSIAVHPT--KPYVLSGSDDLTVKLWNWENNWA--LEQTFEGHEHFVMCVAFNPKD 152 (304)
T ss_dssp EEEETTTCC---EEEEEECCSSCEEEEEECSS--SSEEEEEETTSCEEEEEGGGTTE--EEEEECCCCSCEEEEEECTTC
T ss_pred EEEECCCCc---EEEEEeCCCCcEEEEEEcCC--CCEEEEECCCCeEEEEECCCCcc--hhhhhcccCCcEEEEEECCCC
Confidence 999997763 56778899999999999998 56999999999999999875422 222224799999999999843
Q ss_pred CCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEE
Q 022111 162 APGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWT 241 (302)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd 241 (302)
+..|++|+.|++|++||+...... .....+|...|..++|+|.. ++.+|++|+.|++|++||
T Consensus 153 -------------~~~l~sgs~D~~v~iwd~~~~~~~---~~~~~~~~~~v~~~~~~~~~--~~~~l~s~s~D~~i~iWd 214 (304)
T 2ynn_A 153 -------------PSTFASGCLDRTVKVWSLGQSTPN---FTLTTGQERGVNYVDYYPLP--DKPYMITASDDLTIKIWD 214 (304)
T ss_dssp -------------TTEEEEEETTSEEEEEETTCSSCS---EEEECCCTTCEEEEEECCST--TCCEEEEEETTSEEEEEE
T ss_pred -------------CCEEEEEeCCCeEEEEECCCCCcc---ceeccCCcCcEEEEEEEEcC--CCCEEEEEcCCCeEEEEe
Confidence 368999999999999999765321 11224577889999998853 247899999999999999
Q ss_pred eccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCc
Q 022111 242 CAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDG 290 (302)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~ 290 (302)
++... ....+.+|...|.+++|+|++++|++++.| .|++|+.....
T Consensus 215 ~~~~~---~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 215 YQTKS---CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (304)
T ss_dssp TTTTE---EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC
T ss_pred CCCCc---cceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 97642 123456788899999999999999999999 79999976433
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=297.68 Aligned_cols=248 Identities=18% Similarity=0.198 Sum_probs=200.6
Q ss_pred ccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceE--EEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEc
Q 022111 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQH--LATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE 86 (302)
Q Consensus 9 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~--~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~ 86 (302)
.|+..|++++|++++ .|++|+.||+|+|||+..+.... ...+.+|.+.|++++|+++ +++|++|+.|++|++||+
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spd--g~~l~sgs~d~~i~iwd~ 156 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSS--GTQAVSGSKDICIKVWDL 156 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEET
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCC--CCEEEEEeCCCeEEEEEC
Confidence 356789999999986 78899999999999997644222 2345689999999999864 899999999999999999
Q ss_pred CCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCce
Q 022111 87 GNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL 166 (302)
Q Consensus 87 ~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 166 (302)
+++ .++.++.+|.+.|.+++|+|+. ..++++|+.|++|++||++.......... ..|...+.+++|+|..
T Consensus 157 ~~~---~~~~~~~~h~~~V~~~~~~~~~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~p~~----- 226 (344)
T 4gqb_B 157 AQQ---VVLSSYRAHAAQVTCVAASPHK-DSVFLSCSEDNRILLWDTRCPKPASQIGC-SAPGYLPTSLAWHPQQ----- 226 (344)
T ss_dssp TTT---EEEEEECCCSSCEEEEEECSSC-TTEEEEEETTSCEEEEETTSSSCEEECC-----CCCEEEEEECSSC-----
T ss_pred CCC---cEEEEEcCcCCceEEEEecCCC-CCceeeeccccccccccccccceeeeeec-ceeeccceeeeecCCC-----
Confidence 775 4678899999999999999984 34789999999999999976543322211 2455678999999854
Q ss_pred eecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCC
Q 022111 167 VGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEG 246 (302)
Q Consensus 167 ~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~ 246 (302)
+.+|++|+.|++|+|||++++ +++..+.+|...|++++|+|++ ..+|++|+.|++|+|||++...
T Consensus 227 --------~~~l~sg~~dg~v~~wd~~~~----~~~~~~~~h~~~v~~v~fsp~g---~~~lasgs~D~~i~vwd~~~~~ 291 (344)
T 4gqb_B 227 --------SEVFVFGDENGTVSLVDTKST----SCVLSSAVHSQCVTGLVFSPHS---VPFLASLSEDCSLAVLDSSLSE 291 (344)
T ss_dssp --------TTEEEEEETTSEEEEEESCC------CCEEEECCSSCEEEEEECSSS---SCCEEEEETTSCEEEECTTCCE
T ss_pred --------CcceEEeccCCcEEEEECCCC----cEEEEEcCCCCCEEEEEEccCC---CeEEEEEeCCCeEEEEECCCCc
Confidence 468899999999999999876 4567789999999999999986 3579999999999999987532
Q ss_pred cceeeeeeccCCCcEEEEEEccCCC-EEEEecCC-ceEEeeecC
Q 022111 247 EQWEGRVLKDFKTPVWSVSWSLTGN-LLAVADAN-NVTLWKEAV 288 (302)
Q Consensus 247 ~~~~~~~~~~~~~~v~~~~~spdg~-~la~~~~d-~i~~w~~~~ 288 (302)
...+.+|...|++++|||+|+ +|++++.| .|++|+...
T Consensus 292 ----~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 292 ----LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp ----EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred ----EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 123467889999999999986 56788878 799999864
No 5
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-41 Score=296.29 Aligned_cols=292 Identities=46% Similarity=0.828 Sum_probs=230.3
Q ss_pred cccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEE
Q 022111 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83 (302)
Q Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~i 83 (302)
.+++.+|.+.|++++|+|++++||+|+.|+.|++|++.....+.+..+.+|.+.|++++|+++.++++|++++.|++|++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~i 83 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 83 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEE
Confidence 45678999999999999999999999999999999997655667778899999999999986544789999999999999
Q ss_pred EEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCC
Q 022111 84 WKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAP 163 (302)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 163 (302)
||+.+.. +.....+..|...|.+++|+|+..+.++++++.|+.|++||+..........+ ..|...|.+++|+|....
T Consensus 84 wd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~ 161 (379)
T 3jrp_A 84 WKEENGR-WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII-DAHAIGVNSASWAPATIE 161 (379)
T ss_dssp EEEETTE-EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEE-ECCTTCEEEEEECCCC--
T ss_pred EEcCCCc-eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEe-cCCCCceEEEEEcCcccc
Confidence 9997652 34567788899999999999974356899999999999999986543333333 378889999999984211
Q ss_pred CceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEec
Q 022111 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCA 243 (302)
Q Consensus 164 ~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~ 243 (302)
... .....+++..|++++.|+.|++||++++.....+...+.+|...|.+++|+|++ ..+..|++++.|+.|++||++
T Consensus 162 ~~~-~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~-~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 162 EDG-EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV-LLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp ---------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC-SSSEEEEEEETTSCEEEEEES
T ss_pred ccc-cccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCC-CCCCeEEEEeCCCEEEEEeCC
Confidence 000 000112357899999999999999987654444556778999999999999982 002789999999999999998
Q ss_pred cCCcceeeeee--ccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCceEEEeeecC
Q 022111 244 KEGEQWEGRVL--KDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQVSVVE 299 (302)
Q Consensus 244 ~~~~~~~~~~~--~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~~~~~~~~~ 299 (302)
........... ..+...|++++|+|+|++|++++.| .|++|+....+.|++...+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 298 (379)
T 3jrp_A 240 NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGEVH 298 (379)
T ss_dssp STTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEEEEEEC
T ss_pred CCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcccccccee
Confidence 64322222222 3467789999999999999999888 79999998888888877654
No 6
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.2e-41 Score=293.34 Aligned_cols=265 Identities=27% Similarity=0.472 Sum_probs=211.8
Q ss_pred ccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEc
Q 022111 7 ETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE 86 (302)
Q Consensus 7 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~ 86 (302)
..+|...|++++|+|++++||+|+.|++++||++.....+.+..+.+|...|.+++|+++ +++|++|+.|++|++||+
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~--~~~l~s~s~D~~v~iwd~ 134 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPS--GNLLATCSRDKSVWVWEV 134 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEEE
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCC--CCEEEEEECCCeEEEEEC
Confidence 468999999999999999999999999999999876555667889999999999999864 899999999999999999
Q ss_pred CCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCce
Q 022111 87 GNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL 166 (302)
Q Consensus 87 ~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 166 (302)
+..........+..|...|.+++|+|+ +.+|++|+.|+.|++|+...........+ .+|...|.+++|+|++
T Consensus 135 ~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~l~s~s~d~~i~~w~~~~~~~~~~~~~-~~h~~~v~~l~~sp~g----- 206 (345)
T 3fm0_A 135 DEEDEYECVSVLNSHTQDVKHVVWHPS--QELLASASYDDTVKLYREEEDDWVCCATL-EGHESTVWSLAFDPSG----- 206 (345)
T ss_dssp CTTSCEEEEEEECCCCSCEEEEEECSS--SSCEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECTTS-----
T ss_pred CCCCCeEEEEEecCcCCCeEEEEECCC--CCEEEEEeCCCcEEEEEecCCCEEEEEEe-cCCCCceEEEEECCCC-----
Confidence 776555567788899999999999998 66899999999999999875422222334 3899999999999864
Q ss_pred eecccCCCceeEEEeeCCCcEEEEEEecCccc-----------ccccccccc-CCCceeEEEeeCCCCCCccEEEEEecC
Q 022111 167 VGLGLLDPVQKLASCGCDNTVKVWKMYNGIWK-----------MDCFPALQM-HSDWVRSVAWAPNLGLPKSTIASASQD 234 (302)
Q Consensus 167 ~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~-----------~~~~~~~~~-h~~~v~~v~~~p~~~~~~~~l~s~s~D 234 (302)
.+|++|+.|++|+|||....... ..++..+.+ |...|.+++|+|++ ..|++++.|
T Consensus 207 ---------~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~----~~l~s~~~d 273 (345)
T 3fm0_A 207 ---------QRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLT----GALATACGD 273 (345)
T ss_dssp ---------SEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTT----CCEEEEETT
T ss_pred ---------CEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCC----CEEEEEeCC
Confidence 78999999999999998543111 122334444 88999999999985 679999999
Q ss_pred CeEEEEEeccCCccee------eeeeccCCCcEEEEEEccCC-CEEEEecCC-ceEEeeecCCceEEE
Q 022111 235 GTVVIWTCAKEGEQWE------GRVLKDFKTPVWSVSWSLTG-NLLAVADAN-NVTLWKEAVDGEWQQ 294 (302)
Q Consensus 235 ~~i~iwd~~~~~~~~~------~~~~~~~~~~v~~~~~spdg-~~la~~~~d-~i~~w~~~~~~~~~~ 294 (302)
+.|++|+.+....... ......|...|.+++|+|++ .+||+++.| .|++|+.....+..+
T Consensus 274 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 274 DAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHH 341 (345)
T ss_dssp SCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC------
T ss_pred CeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCccc
Confidence 9999999865321111 11234678899999999998 599999988 799999876554433
No 7
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=291.69 Aligned_cols=259 Identities=29% Similarity=0.490 Sum_probs=210.1
Q ss_pred cccccccc-ceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEE-EecCcccCeEEEEeeCCCCCCEEEEEeCCCeEE
Q 022111 5 KIETGHED-TVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLA-TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVI 82 (302)
Q Consensus 5 ~~~~~h~~-~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~-~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~ 82 (302)
+.+.+|.+ .|+.++|+|+|++||+|+.|++|+||++......... ...+|...|.+++|+|+ +++|++|+.|++++
T Consensus 9 ~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~--g~~l~s~s~D~~v~ 86 (345)
T 3fm0_A 9 GRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPC--GNYLASASFDATTC 86 (345)
T ss_dssp EEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTT--SSEEEEEETTSCEE
T ss_pred eeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCC--CCEEEEEECCCcEE
Confidence 34668988 9999999999999999999999999999764322222 23689999999999874 89999999999999
Q ss_pred EEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCC
Q 022111 83 IWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMA 162 (302)
Q Consensus 83 iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 162 (302)
+||.... ...+...+.+|...|.+++|+|+ +.+|++|+.|++|++||+..............|...|.+++|+|++
T Consensus 87 iw~~~~~-~~~~~~~~~~h~~~v~~v~~sp~--~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~- 162 (345)
T 3fm0_A 87 IWKKNQD-DFECVTTLEGHENEVKSVAWAPS--GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ- 162 (345)
T ss_dssp EEEECCC--EEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSS-
T ss_pred EEEccCC-CeEEEEEccCCCCCceEEEEeCC--CCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCC-
Confidence 9998654 23466788999999999999998 6799999999999999997654433333334789999999999864
Q ss_pred CCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEe
Q 022111 163 PGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242 (302)
Q Consensus 163 ~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~ 242 (302)
.+|++|+.|++|++||+.++.+ .+...+.+|...|.+++|+|++ ++|++++.|++|+|||.
T Consensus 163 -------------~~l~s~s~d~~i~~w~~~~~~~--~~~~~~~~h~~~v~~l~~sp~g----~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 163 -------------ELLASASYDDTVKLYREEEDDW--VCCATLEGHESTVWSLAFDPSG----QRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp -------------SCEEEEETTSCEEEEEEETTEE--EEEEEECCCSSCEEEEEECTTS----SEEEEEETTSCEEEEEE
T ss_pred -------------CEEEEEeCCCcEEEEEecCCCE--EEEEEecCCCCceEEEEECCCC----CEEEEEeCCCeEEEecc
Confidence 7899999999999999987532 2345778999999999999985 78999999999999997
Q ss_pred ccCCcc-----------ee--eeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecC
Q 022111 243 AKEGEQ-----------WE--GRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAV 288 (302)
Q Consensus 243 ~~~~~~-----------~~--~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~ 288 (302)
...... +. ..+...+...|++++|+|++..|++++.| .|++|+...
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~ 283 (345)
T 3fm0_A 224 YLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDP 283 (345)
T ss_dssp ECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECT
T ss_pred ccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCC
Confidence 542211 00 01112366789999999999999999888 799998743
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=289.00 Aligned_cols=248 Identities=21% Similarity=0.352 Sum_probs=209.1
Q ss_pred ccccccceeEEEEccC----CCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEE
Q 022111 7 ETGHEDTVHDVAMDFY----GKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVI 82 (302)
Q Consensus 7 ~~~h~~~v~~~~~s~~----~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~ 82 (302)
..+|.+.|++++|+++ +++|+||+.|++|+||++..........+.+|...|.+++|+++ +.++++++.|++|+
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~--~~~l~s~s~D~~i~ 105 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHT--LPIAASSSLDAHIR 105 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSS--SSEEEEEETTSEEE
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCC--CCEEEEEeCCCcEE
Confidence 5689999999999875 57999999999999999976544455678999999999999864 78999999999999
Q ss_pred EEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCC
Q 022111 83 IWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMA 162 (302)
Q Consensus 83 iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 162 (302)
+||++++ ..+..+..|...+.+++|+|+ +.+|++|+.|+.|++|++..... ...+. .|...+.+++|+|++
T Consensus 106 lWd~~~~---~~~~~~~~~~~~~~~~~~spd--g~~l~~g~~dg~v~i~~~~~~~~--~~~~~-~~~~~v~~~~~spdg- 176 (321)
T 3ow8_A 106 LWDLENG---KQIKSIDAGPVDAWTLAFSPD--SQYLATGTHVGKVNIFGVESGKK--EYSLD-TRGKFILSIAYSPDG- 176 (321)
T ss_dssp EEETTTT---EEEEEEECCTTCCCCEEECTT--SSEEEEECTTSEEEEEETTTCSE--EEEEE-CSSSCEEEEEECTTS-
T ss_pred EEECCCC---CEEEEEeCCCccEEEEEECCC--CCEEEEEcCCCcEEEEEcCCCce--eEEec-CCCceEEEEEECCCC-
Confidence 9999775 356677788899999999998 67999999999999999875432 22332 577789999999864
Q ss_pred CCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEe
Q 022111 163 PGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242 (302)
Q Consensus 163 ~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~ 242 (302)
++|++|+.|+.|++||+.++ .++..+.+|...|++++|+|++ .+|++++.|++|++||+
T Consensus 177 -------------~~lasg~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~l~~spd~----~~l~s~s~dg~i~iwd~ 235 (321)
T 3ow8_A 177 -------------KYLASGAIDGIINIFDIATG----KLLHTLEGHAMPIRSLTFSPDS----QLLVTASDDGYIKIYDV 235 (321)
T ss_dssp -------------SEEEEEETTSCEEEEETTTT----EEEEEECCCSSCCCEEEECTTS----CEEEEECTTSCEEEEET
T ss_pred -------------CEEEEEcCCCeEEEEECCCC----cEEEEEcccCCceeEEEEcCCC----CEEEEEcCCCeEEEEEC
Confidence 79999999999999999876 3456788999999999999985 78999999999999999
Q ss_pred ccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCC
Q 022111 243 AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVD 289 (302)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~ 289 (302)
+.... ...+.+|...|.+++|+|+|++|++++.| .|++|+....
T Consensus 236 ~~~~~---~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 236 QHANL---AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 280 (321)
T ss_dssp TTCCE---EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred CCcce---eEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Confidence 75431 23456788899999999999999999998 7999998643
No 9
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1e-40 Score=299.54 Aligned_cols=254 Identities=24% Similarity=0.389 Sum_probs=214.2
Q ss_pred cccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEE
Q 022111 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83 (302)
Q Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~i 83 (302)
...+.+|.++|++++|+|++++|++|+.|++|+|||+..+ +....+.+|.+.|.+++|+++ +++|++|+.|++|++
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~--~~~~~l~~h~~~V~~v~~~~~--~~~l~sgs~D~~i~i 176 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG--DFERTLKGHTDSVQDISFDHS--GKLLASCSADMTIKL 176 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTC--CCCEEECCCSSCEEEEEECTT--SSEEEEEETTSCCCE
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--cEEEEEeccCCcEEEEEEcCC--CCEEEEEeCCCeEEE
Confidence 3456799999999999999999999999999999998653 456788999999999999864 789999999999999
Q ss_pred EEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCC
Q 022111 84 WKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAP 163 (302)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 163 (302)
||+.+. .++.++.+|...|.+++|+|+ +..|++|+.|++|++||+..... ...+. +|...|.++.|+|+
T Consensus 177 wd~~~~---~~~~~~~~h~~~V~~v~~~p~--~~~l~s~s~D~~i~~wd~~~~~~--~~~~~-~h~~~v~~~~~~~~--- 245 (410)
T 1vyh_C 177 WDFQGF---ECIRTMHGHDHNVSSVSIMPN--GDHIVSASRDKTIKMWEVQTGYC--VKTFT-GHREWVRMVRPNQD--- 245 (410)
T ss_dssp EETTSS---CEEECCCCCSSCEEEEEECSS--SSEEEEEETTSEEEEEETTTCCE--EEEEE-CCSSCEEEEEECTT---
T ss_pred EeCCCC---ceeEEEcCCCCCEEEEEEeCC--CCEEEEEeCCCeEEEEECCCCcE--EEEEe-CCCccEEEEEECCC---
Confidence 999764 367788899999999999998 66999999999999999975432 23333 78889999999886
Q ss_pred CceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCC----------------CccE
Q 022111 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGL----------------PKST 227 (302)
Q Consensus 164 ~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~----------------~~~~ 227 (302)
+.+|++|+.|++|++||+.++ .+...+.+|...|.+++|+|+..+ .+.+
T Consensus 246 -----------g~~l~s~s~D~~v~vwd~~~~----~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 310 (410)
T 1vyh_C 246 -----------GTLIASCSNDQTVRVWVVATK----ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPF 310 (410)
T ss_dssp -----------SSEEEEEETTSCEEEEETTTC----CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCE
T ss_pred -----------CCEEEEEcCCCeEEEEECCCC----ceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCE
Confidence 478999999999999999876 345667899999999999997321 1468
Q ss_pred EEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCc
Q 022111 228 IASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDG 290 (302)
Q Consensus 228 l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~ 290 (302)
|++|+.|++|++||++... ....+.+|...|.+++|+|+|++|++++.| .|++|+.....
T Consensus 311 l~sgs~D~~i~iwd~~~~~---~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 311 LLSGSRDKTIKMWDVSTGM---CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371 (410)
T ss_dssp EEEEETTSEEEEEETTTTE---EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC
T ss_pred EEEEeCCCeEEEEECCCCc---eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 9999999999999997542 123346788899999999999999999998 69999985443
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1e-39 Score=283.33 Aligned_cols=253 Identities=23% Similarity=0.311 Sum_probs=207.7
Q ss_pred ccccccccceeEEEEccCC-CEEEEeeCCCcEEEEeecCCC---ceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCe
Q 022111 5 KIETGHEDTVHDVAMDFYG-KRLATASSDSSIKIIGLSNSA---SQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQ 80 (302)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~v~lw~~~~~~---~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~ 80 (302)
.++.+|++.|++++|+|++ ++|+||+.|++|++|++.... ..++..+.+|...|.+++|+++ +++|++|+.|++
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~d--g~~l~s~s~D~~ 88 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTAD--GAYALSASWDKT 88 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTT--SSEEEEEETTSE
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCC--CCEEEEEeCCCE
Confidence 4577999999999999865 899999999999999985322 3456788999999999999864 899999999999
Q ss_pred EEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCC
Q 022111 81 VIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA 160 (302)
Q Consensus 81 i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 160 (302)
|++||++++ .....+.+|...|.+++|+|+ +.+|++|+.|++|++||+... ....+ .+|...+.++.|.|.
T Consensus 89 v~~wd~~~~---~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~D~~i~vwd~~~~---~~~~~-~~h~~~v~~~~~~~~ 159 (319)
T 3frx_A 89 LRLWDVATG---ETYQRFVGHKSDVMSVDIDKK--ASMIISGSRDKTIKVWTIKGQ---CLATL-LGHNDWVSQVRVVPN 159 (319)
T ss_dssp EEEEETTTT---EEEEEEECCSSCEEEEEECTT--SCEEEEEETTSCEEEEETTSC---EEEEE-CCCSSCEEEEEECCC
T ss_pred EEEEECCCC---CeeEEEccCCCcEEEEEEcCC--CCEEEEEeCCCeEEEEECCCC---eEEEE-eccCCcEEEEEEccC
Confidence 999999775 366788899999999999998 669999999999999998632 22333 378899999999985
Q ss_pred CCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEE
Q 022111 161 MAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240 (302)
Q Consensus 161 ~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iw 240 (302)
... .+++..|++++.|++|++||+++. .....+.+|...|++++|+|++ .+|++++.|++|+||
T Consensus 160 ~~~--------~~~~~~l~s~~~d~~i~~wd~~~~----~~~~~~~~h~~~v~~~~~sp~g----~~l~s~~~dg~i~iw 223 (319)
T 3frx_A 160 EKA--------DDDSVTIISAGNDKMVKAWNLNQF----QIEADFIGHNSNINTLTASPDG----TLIASAGKDGEIMLW 223 (319)
T ss_dssp --------------CCEEEEEETTSCEEEEETTTT----EEEEEECCCCSCEEEEEECTTS----SEEEEEETTCEEEEE
T ss_pred CCC--------CCCccEEEEEeCCCEEEEEECCcc----hhheeecCCCCcEEEEEEcCCC----CEEEEEeCCCeEEEE
Confidence 421 112458999999999999999765 3445678999999999999995 789999999999999
Q ss_pred EeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCCceEEeeecC
Q 022111 241 TCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAV 288 (302)
Q Consensus 241 d~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d~i~~w~~~~ 288 (302)
|++..... ..+ ....+|.+++|+|+|.+|+++..+++++|+...
T Consensus 224 d~~~~~~~---~~~-~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~ 267 (319)
T 3frx_A 224 NLAAKKAM---YTL-SAQDEVFSLAFSPNRYWLAAATATGIKVFSLDP 267 (319)
T ss_dssp ETTTTEEE---EEE-ECCSCEEEEEECSSSSEEEEEETTEEEEEEETT
T ss_pred ECCCCcEE---EEe-cCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCc
Confidence 99764211 112 234689999999999999999888999999754
No 11
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-39 Score=284.07 Aligned_cols=266 Identities=28% Similarity=0.531 Sum_probs=203.2
Q ss_pred cccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEe-cC-cccCeEEEEeeCCCCCCEEEEEeCCCeE
Q 022111 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATL-KG-HRGPVWQVAWAHPKFGSILASCSYDGQV 81 (302)
Q Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~-~~-h~~~v~~v~~~~~~~~~~l~s~s~D~~i 81 (302)
.+.+.+|++.|++++|+++ +||+|+.|++|++|++.......+..+ .+ |.+.|++++|+|+ +++|++|+.|++|
T Consensus 7 ~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~--~~~las~s~D~~v 82 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPH--TSLLAAGSFDSTV 82 (330)
T ss_dssp EEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTT--SSEEEEEETTSCE
T ss_pred ceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCC--CCEEEEEeCCCcE
Confidence 3456799999999999986 999999999999999975433445555 44 9999999999864 7899999999999
Q ss_pred EEEEcCCCC----ceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCC-CeeeeeecccCCCCeEEEE
Q 022111 82 IIWKEGNQN----DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADG-GWDTTRIDQAHPVGVTSVS 156 (302)
Q Consensus 82 ~iwd~~~~~----~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~-~~~~~~~~~~h~~~v~~~~ 156 (302)
+|||++... .......+.+|...|.+++|+|+ +.+|++|+.|++|++||+...+ .........+|...|.+++
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~--g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND--GYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp EEEEC-------CCCEEEEEEC----CEEEEEECTT--SCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEE
T ss_pred EEEEcccCcCccccceeEEEEcCCCCcEEEEEECCC--CCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEE
Confidence 999985321 22456778899999999999998 6799999999999999985332 2222222247999999999
Q ss_pred eCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCe
Q 022111 157 WAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT 236 (302)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~ 236 (302)
|+|++ .+|++|+.|++|++||+.++.+ .++..+.+|.+.|.+++|+|+.. +..|++++.|++
T Consensus 161 ~~p~~--------------~~l~s~s~D~~i~iW~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~--~~~l~s~s~D~~ 222 (330)
T 2hes_X 161 WHPSE--------------ALLASSSYDDTVRIWKDYDDDW--ECVAVLNGHEGTVWSSDFDKTEG--VFRLCSGSDDST 222 (330)
T ss_dssp ECSSS--------------SEEEEEETTSCEEEEEEETTEE--EEEEEECCCSSCEEEEEECCSSS--SCEEEEEETTSC
T ss_pred ECCCC--------------CEEEEEcCCCeEEEEECCCCCe--eEEEEccCCCCcEEEEEecCCCC--eeEEEEEeCCCe
Confidence 99863 7899999999999999976532 34567889999999999999841 367999999999
Q ss_pred EEEEEeccCCc----cee-eeeec-cCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCceEEEe
Q 022111 237 VVIWTCAKEGE----QWE-GRVLK-DFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQV 295 (302)
Q Consensus 237 i~iwd~~~~~~----~~~-~~~~~-~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~~~~~ 295 (302)
|++||++.... .+. ...+. .|..+|++++|+|++ +|++++.| .|++|+.. .++|+..
T Consensus 223 v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~-~~~~~~~ 286 (330)
T 2hes_X 223 VRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEV-DGEWKVF 286 (330)
T ss_dssp EEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEE-TTEEEEE
T ss_pred EEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcC-CCceEEE
Confidence 99999875311 111 11222 377889999999776 67777777 79999975 4555443
No 12
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-40 Score=285.24 Aligned_cols=257 Identities=26% Similarity=0.373 Sum_probs=195.7
Q ss_pred ccccceeEEEEccCCCEEEEeeCCCcEEEEeecCC-----CceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEE
Q 022111 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNS-----ASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83 (302)
Q Consensus 9 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~-----~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~i 83 (302)
+|...|++++|+|++++||+|+.|++|+||++... ..+.+..+.+|.+.|++++|+|+ +++||+|+.|++|++
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~--g~~las~s~D~~v~i 133 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND--GYYLATCSRDKSVWI 133 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTT--SCEEEEEETTSCEEE
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCC--CCEEEEEeCCCEEEE
Confidence 49999999999999999999999999999998432 23456778999999999999864 899999999999999
Q ss_pred EEcCCC-CceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCC
Q 022111 84 WKEGNQ-NDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMA 162 (302)
Q Consensus 84 wd~~~~-~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 162 (302)
||++.. ....++..+.+|...|.+++|+|+ +.+|++|+.|++|++|+...........+ .+|...|.++.|+|+.
T Consensus 134 wd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~--~~~l~s~s~D~~i~iW~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~- 209 (330)
T 2hes_X 134 WETDESGEEYECISVLQEHSQDVKHVIWHPS--EALLASSSYDDTVRIWKDYDDDWECVAVL-NGHEGTVWSSDFDKTE- 209 (330)
T ss_dssp EECCTTCCCCEEEEEECCCSSCEEEEEECSS--SSEEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCSS-
T ss_pred EeccCCCCCeEEEEEeccCCCceEEEEECCC--CCEEEEEcCCCeEEEEECCCCCeeEEEEc-cCCCCcEEEEEecCCC-
Confidence 998432 334567788899999999999998 66999999999999999864321122333 3899999999999863
Q ss_pred CCceeecccCCCceeEEEeeCCCcEEEEEEecCcc----cccccccccc-CCCceeEEEeeCCCCCCccEEEEEecCCeE
Q 022111 163 PGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIW----KMDCFPALQM-HSDWVRSVAWAPNLGLPKSTIASASQDGTV 237 (302)
Q Consensus 163 ~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~----~~~~~~~~~~-h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i 237 (302)
++..|++|+.|++|+|||+..+.. ...+...+.+ |...|.+++|+|+ ..|++++.|++|
T Consensus 210 -----------~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~-----~~l~s~~~dg~v 273 (330)
T 2hes_X 210 -----------GVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFN-----GLIASVGADGVL 273 (330)
T ss_dssp -----------SSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTT-----SCEEEEETTSCE
T ss_pred -----------CeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCC-----CEEEEEeCCCEE
Confidence 135799999999999999975411 1122334444 9999999999976 469999999999
Q ss_pred EEEEeccCCcceeeeeeccCCC-cEEEEEEcc--CCCEEEEecCC-ceEEeeec
Q 022111 238 VIWTCAKEGEQWEGRVLKDFKT-PVWSVSWSL--TGNLLAVADAN-NVTLWKEA 287 (302)
Q Consensus 238 ~iwd~~~~~~~~~~~~~~~~~~-~v~~~~~sp--dg~~la~~~~d-~i~~w~~~ 287 (302)
+|||...............|.. .|.+++|+| ++++||+|+.| .|+||+..
T Consensus 274 ~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 274 AVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp EEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred EEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 9999864311111122245665 899999999 78999999999 79999964
No 13
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.5e-40 Score=285.98 Aligned_cols=245 Identities=22% Similarity=0.394 Sum_probs=210.3
Q ss_pred cccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
.+.+|...|.+++|++++.++++++.|++|++||+.. .+.+..+..|...+.+++|+|+ +++|++++.|+.+++|+
T Consensus 75 ~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~--~~~~~~~~~~~~~~~~~~~spd--g~~l~~g~~dg~v~i~~ 150 (321)
T 3ow8_A 75 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLEN--GKQIKSIDAGPVDAWTLAFSPD--SQYLATGTHVGKVNIFG 150 (321)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT--TEEEEEEECCTTCCCCEEECTT--SSEEEEECTTSEEEEEE
T ss_pred eeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC--CCEEEEEeCCCccEEEEEECCC--CCEEEEEcCCCcEEEEE
Confidence 4679999999999999999999999999999999865 4567778889999999999864 89999999999999999
Q ss_pred cCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCc
Q 022111 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 165 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 165 (302)
++... ....+..|...|.+++|+|+ +.+|++|+.|+.|++||+.+.. ....+. +|...|.+++|+|++
T Consensus 151 ~~~~~---~~~~~~~~~~~v~~~~~spd--g~~lasg~~dg~i~iwd~~~~~--~~~~~~-~h~~~v~~l~~spd~---- 218 (321)
T 3ow8_A 151 VESGK---KEYSLDTRGKFILSIAYSPD--GKYLASGAIDGIINIFDIATGK--LLHTLE-GHAMPIRSLTFSPDS---- 218 (321)
T ss_dssp TTTCS---EEEEEECSSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTTE--EEEEEC-CCSSCCCEEEECTTS----
T ss_pred cCCCc---eeEEecCCCceEEEEEECCC--CCEEEEEcCCCeEEEEECCCCc--EEEEEc-ccCCceeEEEEcCCC----
Confidence 97753 45567778899999999998 6799999999999999987542 223343 788999999999864
Q ss_pred eeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccC
Q 022111 166 LVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKE 245 (302)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~ 245 (302)
.+|++|+.|++|+|||++++ .+...+.+|...|.+++|+|++ .+|++++.|++|+|||++..
T Consensus 219 ----------~~l~s~s~dg~i~iwd~~~~----~~~~~~~~h~~~v~~~~~sp~~----~~l~s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 219 ----------QLLVTASDDGYIKIYDVQHA----NLAGTLSGHASWVLNVAFCPDD----THFVSSSSDKSVKVWDVGTR 280 (321)
T ss_dssp ----------CEEEEECTTSCEEEEETTTC----CEEEEECCCSSCEEEEEECTTS----SEEEEEETTSCEEEEETTTT
T ss_pred ----------CEEEEEcCCCeEEEEECCCc----ceeEEEcCCCCceEEEEECCCC----CEEEEEeCCCcEEEEeCCCC
Confidence 78999999999999999865 3456778999999999999985 78999999999999999754
Q ss_pred CcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeec
Q 022111 246 GEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEA 287 (302)
Q Consensus 246 ~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~ 287 (302)
. ....+.+|...|++++|+|+|++|++++.| .|++||..
T Consensus 281 ~---~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 281 T---CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp E---EEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred E---EEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 2 123346788899999999999999999998 79999963
No 14
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.1e-39 Score=285.48 Aligned_cols=254 Identities=19% Similarity=0.301 Sum_probs=209.6
Q ss_pred CcccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEE
Q 022111 3 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVI 82 (302)
Q Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~ 82 (302)
.++++.+|.+.|++++|+|++++|++|+.|++|++||.... ..+..+..|...|.+++|+++ +++|++|+.|+.++
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~--~~~~~~~~~~~~v~~~~~s~~--~~~l~s~~~d~~v~ 122 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTT--NKVHAIPLRSSWVMTCAYAPS--GNYVACGGLDNICS 122 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC--CEEEEEECSSSCEEEEEECTT--SSEEEEEETTCEEE
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC--CcceEeecCCccEEEEEECCC--CCEEEEEeCCCeEE
Confidence 34567799999999999999999999999999999998653 456778889999999999864 89999999999999
Q ss_pred EEEcCCCC-ceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCC
Q 022111 83 IWKEGNQN-DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAM 161 (302)
Q Consensus 83 iwd~~~~~-~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 161 (302)
+|++.... .......+.+|.+.|.++.|+|+ + .+++++.|++|++||+.+.. ....+. +|...|.+++|+|++
T Consensus 123 iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~-~l~s~s~d~~i~~wd~~~~~--~~~~~~-~h~~~v~~~~~~~~~ 196 (340)
T 1got_B 123 IYNLKTREGNVRVSRELAGHTGYLSCCRFLDD--N-QIVTSSGDTTCALWDIETGQ--QTTTFT-GHTGDVMSLSLAPDT 196 (340)
T ss_dssp EEETTTCSBSCEEEEEEECCSSCEEEEEEEET--T-EEEEEETTSCEEEEETTTTE--EEEEEC-CCSSCEEEEEECTTS
T ss_pred EEECccCCCcceeEEEecCCCccEEEEEECCC--C-cEEEEECCCcEEEEECCCCc--EEEEEc-CCCCceEEEEECCCC
Confidence 99986542 12345677889999999999986 3 59999999999999987542 223343 789999999999863
Q ss_pred CCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEE
Q 022111 162 APGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWT 241 (302)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd 241 (302)
.+|++|+.|++|++||++++ .+...+.+|...|++++|+|++ +.|++|+.|++|++||
T Consensus 197 --------------~~l~sg~~d~~v~~wd~~~~----~~~~~~~~h~~~v~~v~~~p~~----~~l~s~s~d~~v~iwd 254 (340)
T 1got_B 197 --------------RLFVSGACDASAKLWDVREG----MCRQTFTGHESDINAICFFPNG----NAFATGSDDATCRLFD 254 (340)
T ss_dssp --------------SEEEEEETTSCEEEEETTTC----SEEEEECCCSSCEEEEEECTTS----SEEEEEETTSCEEEEE
T ss_pred --------------CEEEEEeCCCcEEEEECCCC----eeEEEEcCCcCCEEEEEEcCCC----CEEEEEcCCCcEEEEE
Confidence 78999999999999999876 3456788999999999999985 7899999999999999
Q ss_pred eccCCcceeeee-eccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCc
Q 022111 242 CAKEGEQWEGRV-LKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDG 290 (302)
Q Consensus 242 ~~~~~~~~~~~~-~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~ 290 (302)
++..... ... ...+...|.+++|+|+|++|++|+.| .|++|+.....
T Consensus 255 ~~~~~~~--~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~ 303 (340)
T 1got_B 255 LRADQEL--MTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD 303 (340)
T ss_dssp TTTTEEE--EEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred CCCCcEE--EEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCc
Confidence 9764211 111 12233579999999999999999998 79999975433
No 15
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3e-40 Score=296.47 Aligned_cols=259 Identities=25% Similarity=0.409 Sum_probs=213.2
Q ss_pred ccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEE
Q 022111 5 KIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIW 84 (302)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iw 84 (302)
+++.+|.+.|++++|++++++|++|+.|++|++||+.. .+.+..+.+|...|.+++|+++ +++|++|+.|++|++|
T Consensus 144 ~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~--~~~~~~~~~h~~~V~~v~~~p~--~~~l~s~s~D~~i~~w 219 (410)
T 1vyh_C 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVSIMPN--GDHIVSASRDKTIKMW 219 (410)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS--SCEEECCCCCSSCEEEEEECSS--SSEEEEEETTSEEEEE
T ss_pred EEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC--CceeEEEcCCCCCEEEEEEeCC--CCEEEEEeCCCeEEEE
Confidence 45678999999999999999999999999999999865 4567788999999999999864 7899999999999999
Q ss_pred EcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCC
Q 022111 85 KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPG 164 (302)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 164 (302)
|++++ .++.++.+|...|.++.|+|+ +.++++|+.|+.|++||+..... ...+ ..|...|.++.|+|+....
T Consensus 220 d~~~~---~~~~~~~~h~~~v~~~~~~~~--g~~l~s~s~D~~v~vwd~~~~~~--~~~~-~~h~~~v~~~~~~~~~~~~ 291 (410)
T 1vyh_C 220 EVQTG---YCVKTFTGHREWVRMVRPNQD--GTLIASCSNDQTVRVWVVATKEC--KAEL-REHRHVVECISWAPESSYS 291 (410)
T ss_dssp ETTTC---CEEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTCCE--EEEE-CCCSSCEEEEEECCSCGGG
T ss_pred ECCCC---cEEEEEeCCCccEEEEEECCC--CCEEEEEcCCCeEEEEECCCCce--eeEe-cCCCceEEEEEEcCccccc
Confidence 99776 367788899999999999998 67999999999999999875432 2333 3788899999999864211
Q ss_pred cee------ecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEE
Q 022111 165 ALV------GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVV 238 (302)
Q Consensus 165 ~~~------~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~ 238 (302)
... ......++.+|++|+.|++|++||++++ .++..+.+|.++|++++|+|++ .+|++|+.|++|+
T Consensus 292 ~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~----~~~~~~~~h~~~v~~v~~~~~g----~~l~s~s~D~~i~ 363 (410)
T 1vyh_C 292 SISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG----MCLMTLVGHDNWVRGVLFHSGG----KFILSCADDKTLR 363 (410)
T ss_dssp GGGGCCSCC-------CCEEEEEETTSEEEEEETTTT----EEEEEEECCSSCEEEEEECSSS----SCEEEEETTTEEE
T ss_pred chhhhccccccccCCCCCEEEEEeCCCeEEEEECCCC----ceEEEEECCCCcEEEEEEcCCC----CEEEEEeCCCeEE
Confidence 100 0001123578999999999999999876 4566788999999999999985 7799999999999
Q ss_pred EEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeee
Q 022111 239 IWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKE 286 (302)
Q Consensus 239 iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~ 286 (302)
+||++.... ...+..|...|++++|+|++.+|++|+.| .|++|+.
T Consensus 364 vwd~~~~~~---~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 364 VWDYKNKRC---MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EECCTTSCC---CEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EEECCCCce---EEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 999975421 23446788899999999999999999999 7999974
No 16
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.6e-40 Score=291.62 Aligned_cols=255 Identities=20% Similarity=0.185 Sum_probs=198.9
Q ss_pred cccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceE--EEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQH--LATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 8 ~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~--~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
.+|...|++++|+|+++ +++++.|++|+|||+..+.... .....+|.+.|++++|+++ +++|++|+.|++|++||
T Consensus 91 ~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spd--g~~l~sgs~dg~v~iwd 167 (357)
T 4g56_B 91 VQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSD--GTQAVSGGKDFSVKVWD 167 (357)
T ss_dssp EECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSS--SSEEEEEETTSCEEEEE
T ss_pred CCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCC--CCEEEEEeCCCeEEEEE
Confidence 36889999999999985 5567889999999986543221 2345689999999999864 89999999999999999
Q ss_pred cCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCc
Q 022111 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 165 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 165 (302)
++++ .....+.+|...|++++|+|+. ..++++++.|+.|++||++.......... ..|...+.+++|+|+.
T Consensus 168 ~~~~---~~~~~~~~h~~~v~~v~~s~~~-~~~~~s~~~dg~v~~wd~~~~~~~~~~~~-~~~~~~v~~v~~sp~~---- 238 (357)
T 4g56_B 168 LSQK---AVLKSYNAHSSEVNCVAACPGK-DTIFLSCGEDGRILLWDTRKPKPATRIDF-CASDTIPTSVTWHPEK---- 238 (357)
T ss_dssp TTTT---EEEEEECCCSSCEEEEEECTTC-SSCEEEEETTSCEEECCTTSSSCBCBCCC-TTCCSCEEEEEECTTS----
T ss_pred CCCC---cEEEEEcCCCCCEEEEEEccCC-CceeeeeccCCceEEEECCCCceeeeeee-ccccccccchhhhhcc----
Confidence 9775 4677888999999999999984 24789999999999999876543322222 2466779999999864
Q ss_pred eeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccC
Q 022111 166 LVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKE 245 (302)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~ 245 (302)
+.+|++|+.|+.|++||++++ .++..+.+|...|++++|+|++ +.+||+|+.|++|+|||++..
T Consensus 239 ---------~~~la~g~~d~~i~~wd~~~~----~~~~~~~~~~~~v~~l~~sp~~---~~~lasgs~D~~i~iwd~~~~ 302 (357)
T 4g56_B 239 ---------DDTFACGDETGNVSLVNIKNP----DSAQTSAVHSQNITGLAYSYHS---SPFLASISEDCTVAVLDADFS 302 (357)
T ss_dssp ---------TTEEEEEESSSCEEEEESSCG----GGCEEECCCSSCEEEEEECSSS---SCCEEEEETTSCEEEECTTSC
T ss_pred ---------cceEEEeecccceeEEECCCC----cEeEEEeccceeEEEEEEcCCC---CCEEEEEeCCCEEEEEECCCC
Confidence 468999999999999999876 4566788999999999999986 367999999999999998753
Q ss_pred CcceeeeeeccCCCcEEEEEEcc-CCCEEEEecCC-ceEEeeecCCceEEE
Q 022111 246 GEQWEGRVLKDFKTPVWSVSWSL-TGNLLAVADAN-NVTLWKEAVDGEWQQ 294 (302)
Q Consensus 246 ~~~~~~~~~~~~~~~v~~~~~sp-dg~~la~~~~d-~i~~w~~~~~~~~~~ 294 (302)
. .....+|...|++|+||| |+++|++++.| .|++|+...+++-+.
T Consensus 303 ~----~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~~~ 349 (357)
T 4g56_B 303 E----VFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRTEN 349 (357)
T ss_dssp E----EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-------
T ss_pred c----EeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccc
Confidence 2 112247888999999999 89999999988 799999876665443
No 17
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.3e-39 Score=280.67 Aligned_cols=251 Identities=21% Similarity=0.287 Sum_probs=208.3
Q ss_pred cccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
.+.+|..+|.+++|++++++|++|+.|++|++||+.. .+.+..+.+|.+.|++++|+|+ +++|++|+.|++|++||
T Consensus 50 ~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~--~~~~~~~~~h~~~v~~~~~~~~--~~~l~sgs~D~~v~lWd 125 (304)
T 2ynn_A 50 SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT--GEKVVDFEAHPDYIRSIAVHPT--KPYVLSGSDDLTVKLWN 125 (304)
T ss_dssp EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT--CCEEEEEECCSSCEEEEEECSS--SSEEEEEETTSCEEEEE
T ss_pred EeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCC--CcEEEEEeCCCCcEEEEEEcCC--CCEEEEECCCCeEEEEE
Confidence 3557999999999999999999999999999999865 3467788999999999999864 78999999999999999
Q ss_pred cCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCc
Q 022111 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 165 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 165 (302)
+++.. .....+.+|...|.+++|+|+. +..|++|+.|++|++||+...... ..+...|...+..+.|+|..
T Consensus 126 ~~~~~--~~~~~~~~h~~~v~~v~~~p~~-~~~l~sgs~D~~v~iwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~---- 196 (304)
T 2ynn_A 126 WENNW--ALEQTFEGHEHFVMCVAFNPKD-PSTFASGCLDRTVKVWSLGQSTPN--FTLTTGQERGVNYVDYYPLP---- 196 (304)
T ss_dssp GGGTT--EEEEEECCCCSCEEEEEECTTC-TTEEEEEETTSEEEEEETTCSSCS--EEEECCCTTCEEEEEECCST----
T ss_pred CCCCc--chhhhhcccCCcEEEEEECCCC-CCEEEEEeCCCeEEEEECCCCCcc--ceeccCCcCcEEEEEEEEcC----
Confidence 97653 3556788999999999999953 568999999999999998754322 22333566788899998743
Q ss_pred eeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccC
Q 022111 166 LVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKE 245 (302)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~ 245 (302)
++.+|++|+.|++|++||++++ .++..+.+|...|.+++|+|++ ..|++|+.|++|++||+++.
T Consensus 197 --------~~~~l~s~s~D~~i~iWd~~~~----~~~~~~~~h~~~v~~~~~~p~~----~~l~s~s~Dg~i~iWd~~~~ 260 (304)
T 2ynn_A 197 --------DKPYMITASDDLTIKIWDYQTK----SCVATLEGHMSNVSFAVFHPTL----PIIISGSEDGTLKIWNSSTY 260 (304)
T ss_dssp --------TCCEEEEEETTSEEEEEETTTT----EEEEEEECCSSCEEEEEECSSS----SEEEEEETTSCEEEEETTTC
T ss_pred --------CCCEEEEEcCCCeEEEEeCCCC----ccceeeCCCCCCEEEEEECCCC----CEEEEEcCCCeEEEEECCCC
Confidence 2478999999999999999876 4567789999999999999985 78999999999999998754
Q ss_pred CcceeeeeeccCCCcEEEEEEccCCC--EEEEecCCceEEeeecC
Q 022111 246 GEQWEGRVLKDFKTPVWSVSWSLTGN--LLAVADANNVTLWKEAV 288 (302)
Q Consensus 246 ~~~~~~~~~~~~~~~v~~~~~spdg~--~la~~~~d~i~~w~~~~ 288 (302)
.. ...+..+...+++++|+|+|. +||+|+++++.+|+...
T Consensus 261 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~~ 302 (304)
T 2ynn_A 261 KV---EKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (304)
T ss_dssp CE---EEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEEECC-
T ss_pred ce---eeeccCCCccEEEEEECCCCCceEEEEecCCceEEEEecc
Confidence 21 233456677899999999874 68899888999998753
No 18
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.5e-39 Score=286.38 Aligned_cols=249 Identities=16% Similarity=0.243 Sum_probs=203.1
Q ss_pred cccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCc--------------------------------------
Q 022111 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSAS-------------------------------------- 45 (302)
Q Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~-------------------------------------- 45 (302)
...+.+|.+.|++++|+|++++||||+.|++|++||......
T Consensus 57 ~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~ 136 (354)
T 2pbi_B 57 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLT 136 (354)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECC
T ss_pred EEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEe
Confidence 345679999999999999999999999999999999643211
Q ss_pred --------eEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCc
Q 022111 46 --------QHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGL 117 (302)
Q Consensus 46 --------~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~ 117 (302)
.....+.+|...|.+++|+++ +..|++++.|++|++||++++ ..+.++.+|...|.+++|+|+..+.
T Consensus 137 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~t~s~D~~v~lwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~g~ 211 (354)
T 2pbi_B 137 FDKNENMAAKKKSVAMHTNYLSACSFTNS--DMQILTASGDGTCALWDVESG---QLLQSFHGHGADVLCLDLAPSETGN 211 (354)
T ss_dssp CCTTCCSGGGCEEEEECSSCEEEEEECSS--SSEEEEEETTSEEEEEETTTC---CEEEEEECCSSCEEEEEECCCSSCC
T ss_pred ccccccccccceeeeccCCcEEEEEEeCC--CCEEEEEeCCCcEEEEeCCCC---eEEEEEcCCCCCeEEEEEEeCCCCC
Confidence 012334568888999999764 789999999999999999775 3677888999999999999875577
Q ss_pred EEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcc
Q 022111 118 SLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIW 197 (302)
Q Consensus 118 ~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~ 197 (302)
.|++|+.|++|++||+++... ...+ ..|...|.+++|+|++ ..|++|+.|++|++||++...
T Consensus 212 ~l~sgs~Dg~v~~wd~~~~~~--~~~~-~~h~~~v~~v~~~p~~--------------~~l~s~s~D~~v~lwd~~~~~- 273 (354)
T 2pbi_B 212 TFVSGGCDKKAMVWDMRSGQC--VQAF-ETHESDVNSVRYYPSG--------------DAFASGSDDATCRLYDLRADR- 273 (354)
T ss_dssp EEEEEETTSCEEEEETTTCCE--EEEE-CCCSSCEEEEEECTTS--------------SEEEEEETTSCEEEEETTTTE-
T ss_pred EEEEEeCCCeEEEEECCCCcE--EEEe-cCCCCCeEEEEEeCCC--------------CEEEEEeCCCeEEEEECCCCc-
Confidence 999999999999999876432 2233 3789999999999864 789999999999999997652
Q ss_pred cccccccc--ccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEE
Q 022111 198 KMDCFPAL--QMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAV 275 (302)
Q Consensus 198 ~~~~~~~~--~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~ 275 (302)
....+ ..+...+.+++|+|++ .+|++|+.|++|++||+..... ...+.+|..+|.+++|+|||++|++
T Consensus 274 ---~~~~~~~~~~~~~~~~~~~s~~g----~~l~~g~~d~~i~vwd~~~~~~---~~~l~~h~~~v~~l~~spdg~~l~s 343 (354)
T 2pbi_B 274 ---EVAIYSKESIIFGASSVDFSLSG----RLLFAGYNDYTINVWDVLKGSR---VSILFGHENRVSTLRVSPDGTAFCS 343 (354)
T ss_dssp ---EEEEECCTTCCSCEEEEEECTTS----SEEEEEETTSCEEEEETTTCSE---EEEECCCSSCEEEEEECTTSSCEEE
T ss_pred ---EEEEEcCCCcccceeEEEEeCCC----CEEEEEECCCcEEEEECCCCce---EEEEECCCCcEEEEEECCCCCEEEE
Confidence 11222 2344578999999985 7899999999999999875431 2345678899999999999999999
Q ss_pred ecCC-ceEEee
Q 022111 276 ADAN-NVTLWK 285 (302)
Q Consensus 276 ~~~d-~i~~w~ 285 (302)
|+.| .|++|+
T Consensus 344 gs~D~~v~vW~ 354 (354)
T 2pbi_B 344 GSWDHTLRVWA 354 (354)
T ss_dssp EETTSEEEEEC
T ss_pred EcCCCCEEecC
Confidence 9999 799995
No 19
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.1e-39 Score=282.13 Aligned_cols=260 Identities=20% Similarity=0.286 Sum_probs=205.6
Q ss_pred ccccccccceeEEEE-----cc-CCCEEEEeeCCCcEEEEeecCCC-----ceEEEEecCcccCeEEEEeeCCCCCCEEE
Q 022111 5 KIETGHEDTVHDVAM-----DF-YGKRLATASSDSSIKIIGLSNSA-----SQHLATLKGHRGPVWQVAWAHPKFGSILA 73 (302)
Q Consensus 5 ~~~~~h~~~v~~~~~-----s~-~~~~l~s~~~d~~v~lw~~~~~~-----~~~~~~~~~h~~~v~~v~~~~~~~~~~l~ 73 (302)
.++.+|++.|++++| ++ ++++|+||+.|++|++|++.... ..+...+.+|...|.+++|+++ +.+|+
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~--~~~l~ 92 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQE--NCFAI 92 (343)
T ss_dssp EEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSS--TTEEE
T ss_pred eeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCC--CCEEE
Confidence 457799999999999 66 89999999999999999986432 3456778999999999999864 78999
Q ss_pred EEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeE
Q 022111 74 SCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVT 153 (302)
Q Consensus 74 s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~ 153 (302)
+|+.|++|++||++++. ....+.+|...|.+++|+|+ +.+|++|+.|++|++||+... ..........|...+.
T Consensus 93 s~s~D~~v~lwd~~~~~---~~~~~~~h~~~v~~v~~sp~--~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~ 166 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGT---TYKRFVGHQSEVYSVAFSPD--NRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVS 166 (343)
T ss_dssp EEETTSEEEEEETTSSC---EEEEEECCCSCEEEEEECSS--TTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEE
T ss_pred EEcCCCcEEEEECCCCc---EEEEEcCCCCcEEEEEECCC--CCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceee
Confidence 99999999999997753 56778899999999999998 669999999999999998632 1111111226788899
Q ss_pred EEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEec
Q 022111 154 SVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQ 233 (302)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~ 233 (302)
++.|+|...... ...+.+.+|++++.|++|++||.. . .....+.+|...|.+++|+|++ ++|++|+.
T Consensus 167 ~~~~~~~~~~~~----~~~~~~~~l~s~~~d~~i~iwd~~-~----~~~~~~~~h~~~v~~~~~s~~g----~~l~sgs~ 233 (343)
T 2xzm_R 167 CVRYSPIMKSAN----KVQPFAPYFASVGWDGRLKVWNTN-F----QIRYTFKAHESNVNHLSISPNG----KYIATGGK 233 (343)
T ss_dssp EEEECCCCCSCS----CCCSSCCEEEEEETTSEEEEEETT-T----EEEEEEECCSSCEEEEEECTTS----SEEEEEET
T ss_pred eeeecccccccc----ccCCCCCEEEEEcCCCEEEEEcCC-C----ceeEEEcCccccceEEEECCCC----CEEEEEcC
Confidence 999999652211 011224689999999999999943 2 3345678899999999999995 78999999
Q ss_pred CCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCCceEEeeecC
Q 022111 234 DGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAV 288 (302)
Q Consensus 234 D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d~i~~w~~~~ 288 (302)
|+.|++||++...... .. ..+...|.+++|+|++.+|+++.+++|++|+...
T Consensus 234 dg~v~iwd~~~~~~~~--~~-~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~ 285 (343)
T 2xzm_R 234 DKKLLIWDILNLTYPQ--RE-FDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMT 285 (343)
T ss_dssp TCEEEEEESSCCSSCS--EE-EECSSCEEEEEECSSSCEEEEEESSCEEEEESSS
T ss_pred CCeEEEEECCCCcccc--ee-ecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 9999999985432211 11 2245579999999999999888766999999753
No 20
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.2e-39 Score=289.63 Aligned_cols=260 Identities=21% Similarity=0.284 Sum_probs=208.2
Q ss_pred ccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEE
Q 022111 5 KIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIW 84 (302)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iw 84 (302)
+++.+|.+.|++++|+|++++|+||+.|++|+|||... .+....+.+|...|.+++|+++ +++|++|+.|+.+++|
T Consensus 60 ~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~--~~~~~~~~~h~~~v~~~~~s~~--g~~las~~~d~~v~iw 135 (380)
T 3iz6_a 60 RTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALT--SQKTHAIKLHCPWVMECAFAPN--GQSVACGGLDSACSIF 135 (380)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTT--TEEEEEEECCCTTCCCCEECTT--SSEEEECCSSSCCEEE
T ss_pred ecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCC--CccceEEecCCCCEEEEEECCC--CCEEEEeeCCCcEEEE
Confidence 45779999999999999999999999999999999865 4566788899999999999864 8999999999999999
Q ss_pred EcCCCC----ceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeee--eecccCCCCeEEEEeC
Q 022111 85 KEGNQN----DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTT--RIDQAHPVGVTSVSWA 158 (302)
Q Consensus 85 d~~~~~----~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~--~~~~~h~~~v~~~~~~ 158 (302)
++.... .......+.+|.+.|.++.|+|+. +..|++|+.|++|++||+.+....... ....+|...|.++.|+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~-~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 214 (380)
T 3iz6_a 136 NLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQ-ETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSIN 214 (380)
T ss_dssp ECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSS-SSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEEC
T ss_pred ECCCCccccCCccceeeccCCCcceEEEEEecCC-CCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEee
Confidence 986431 112334678899999999999974 457999999999999998765432221 1224688899999997
Q ss_pred CCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEE
Q 022111 159 PAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVV 238 (302)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~ 238 (302)
|.. +.+|++|+.|++|++||++... ..+..+.+|.+.|++++|+|++ .+|++|+.|++|+
T Consensus 215 ~~~-------------~~~l~sgs~D~~v~~wd~~~~~---~~~~~~~~h~~~v~~v~~~p~~----~~l~s~s~D~~i~ 274 (380)
T 3iz6_a 215 SLN-------------ANMFISGSCDTTVRLWDLRITS---RAVRTYHGHEGDINSVKFFPDG----QRFGTGSDDGTCR 274 (380)
T ss_dssp SSS-------------CCEEEEEETTSCEEEEETTTTC---CCCEEECCCSSCCCEEEECTTS----SEEEEECSSSCEE
T ss_pred cCC-------------CCEEEEEECCCeEEEEECCCCC---cceEEECCcCCCeEEEEEecCC----CeEEEEcCCCeEE
Confidence 632 4789999999999999997432 3456778999999999999985 7899999999999
Q ss_pred EEEeccCCcceeeeeecc-------CCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCceE
Q 022111 239 IWTCAKEGEQWEGRVLKD-------FKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEW 292 (302)
Q Consensus 239 iwd~~~~~~~~~~~~~~~-------~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~~ 292 (302)
+||++..... ..... ....|.+++|+|+|++|++|+.| .|++||.......
T Consensus 275 lwd~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~ 333 (380)
T 3iz6_a 275 LFDMRTGHQL---QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMV 333 (380)
T ss_dssp EEETTTTEEE---EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEE
T ss_pred EEECCCCcEE---EEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceE
Confidence 9999864211 11111 12248899999999999999988 7999997554443
No 21
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=5.4e-38 Score=272.37 Aligned_cols=285 Identities=33% Similarity=0.583 Sum_probs=222.5
Q ss_pred cccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCC--ceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeE
Q 022111 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSA--SQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQV 81 (302)
Q Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~--~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i 81 (302)
+.++.+|++.|++++|+|++++||+|+.|++|++|++.... .+....+.+|...|.+++|++..++++|++++.|++|
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 45577999999999999999999999999999999997533 2456678899999999999863247899999999999
Q ss_pred EEEEcCCCC------ceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeee----------ec
Q 022111 82 IIWKEGNQN------DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTR----------ID 145 (302)
Q Consensus 82 ~iwd~~~~~------~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~----------~~ 145 (302)
++||++... .+.....+..|...|.+++|+|+..+.++++++.|+.|++||++......... ..
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccccc
Confidence 999997642 12456778889999999999997435689999999999999987543211110 11
Q ss_pred ccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCc
Q 022111 146 QAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPK 225 (302)
Q Consensus 146 ~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~ 225 (302)
..|...+.++.|+|... .+..|++++.|+.+.+|+...+. ......+.+|...|.+++|+|++....
T Consensus 164 ~~~~~~~~~~~~~p~~~-----------~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~h~~~i~~~~~~p~~~~~~ 230 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRF-----------SPEKLAVSALEQAIIYQRGKDGK--LHVAAKLPGHKSLIRSISWAPSIGRWY 230 (351)
T ss_dssp SSCSCCCEEEEECCCSS-----------SCCEEEEEETTEEEEEEECTTSC--EEEEEECCCCCSCEEEEEECCCSSCSS
T ss_pred CCcccceeEEEeccCCC-----------CCcEEEEecCCCcEEEEccCCCc--eeeeeecCCCCcceeEEEECCCCCCcc
Confidence 24667889999998621 14689999999999777765542 223556788999999999999852112
Q ss_pred cEEEEEecCCeEEEEEeccCCcc-------------------------------------------eeeeeeccCCCcEE
Q 022111 226 STIASASQDGTVVIWTCAKEGEQ-------------------------------------------WEGRVLKDFKTPVW 262 (302)
Q Consensus 226 ~~l~s~s~D~~i~iwd~~~~~~~-------------------------------------------~~~~~~~~~~~~v~ 262 (302)
++|++++.|+.|++||++..... .......+|...|.
T Consensus 231 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 310 (351)
T 3f3f_A 231 QLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVW 310 (351)
T ss_dssp EEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEE
T ss_pred eEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEE
Confidence 68999999999999999753100 01122356778999
Q ss_pred EEEEccCCCEEEEecCC-ceEEeeecCCceEEEeeecCCC
Q 022111 263 SVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQVSVVEPQ 301 (302)
Q Consensus 263 ~~~~spdg~~la~~~~d-~i~~w~~~~~~~~~~~~~~~~~ 301 (302)
+++|+|+|++|++++.| .|++|+....+.|+++.++..+
T Consensus 311 ~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~ 350 (351)
T 3f3f_A 311 SVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMSVITAQ 350 (351)
T ss_dssp EEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEEEEC--
T ss_pred EEEEcCCCCEEEEecCCCcEEEEecCcCcchhheeehccc
Confidence 99999999999999988 6999999988899999887654
No 22
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.8e-40 Score=288.97 Aligned_cols=265 Identities=18% Similarity=0.264 Sum_probs=206.8
Q ss_pred CCCcccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCe
Q 022111 1 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQ 80 (302)
Q Consensus 1 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~ 80 (302)
|.+.++...|..+|++++|+|++++||+|+.|++|++|++.....+.+..+.+|...|.+++|+++ +++|++++.|++
T Consensus 1 m~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~s~d~~ 78 (377)
T 3dwl_C 1 MATSQVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPK--SNRIVTCSQDRN 78 (377)
T ss_dssp -CCEEEEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTT--TCCEEEEETTSS
T ss_pred CCcceeEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCC--CCEEEEEeCCCe
Confidence 566677777888999999999999999999999999999976432566788899999999999864 789999999999
Q ss_pred EEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeee-eeecccCCCCeEEEEeCC
Q 022111 81 VIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDT-TRIDQAHPVGVTSVSWAP 159 (302)
Q Consensus 81 i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~ 159 (302)
|++||+.+...+.+...+..|...|.+++|+|+ +.+|++|+.|+.|++||+.....+.. ..+...|...|.+++|+|
T Consensus 79 v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 156 (377)
T 3dwl_C 79 AYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPN--EDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHP 156 (377)
T ss_dssp EEEC------CCCCEEECCCCSSCEEEEECCTT--SSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECT
T ss_pred EEEEEcCCCCceeeeeEecccCCceEEEEECCC--CCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcC
Confidence 999999775423456677889999999999997 66899999999999999876543222 334323899999999998
Q ss_pred CCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcc--------------ccccccccccCCCceeEEEeeCCCCCCc
Q 022111 160 AMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIW--------------KMDCFPALQMHSDWVRSVAWAPNLGLPK 225 (302)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~--------------~~~~~~~~~~h~~~v~~v~~~p~~~~~~ 225 (302)
++ .+|++++.|+.|++||+..... ...+...+ +|...|.+++|+|++
T Consensus 157 ~~--------------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~---- 217 (377)
T 3dwl_C 157 NN--------------VLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSG---- 217 (377)
T ss_dssp TS--------------SEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTS----
T ss_pred CC--------------CEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCC----
Confidence 63 7899999999999999953210 11334455 899999999999995
Q ss_pred cEEEEEecCCeEEEEEeccCCccee-eeeeccCCCcEEEEEEccCCCEEEEecCCceEEeeecC
Q 022111 226 STIASASQDGTVVIWTCAKEGEQWE-GRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAV 288 (302)
Q Consensus 226 ~~l~s~s~D~~i~iwd~~~~~~~~~-~~~~~~~~~~v~~~~~spdg~~la~~~~d~i~~w~~~~ 288 (302)
++|++++.|+.|++||++....... ...+..+..+|.+++|+|+|++|++++.+++.+|+...
T Consensus 218 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~ 281 (377)
T 3dwl_C 218 NALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNE 281 (377)
T ss_dssp SCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC
T ss_pred CEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCC
Confidence 6899999999999999986543110 12345677889999999999999999888888888653
No 23
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.3e-38 Score=295.51 Aligned_cols=270 Identities=19% Similarity=0.260 Sum_probs=205.6
Q ss_pred cccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEec-------CcccCeEEEEeeCCCCCCEEEEEeCC
Q 022111 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLK-------GHRGPVWQVAWAHPKFGSILASCSYD 78 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~-------~h~~~v~~v~~~~~~~~~~l~s~s~D 78 (302)
++.+|.+.|++++|+|++++||+|+.|++|+|||+..+ +.+..+. +|.+.|++++|+|+ +++|+|++.|
T Consensus 185 ~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g--~~~~~~~~~~~~~~~h~~~V~~v~~spd--g~~l~s~s~D 260 (611)
T 1nr0_A 185 TFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG--TKTGVFEDDSLKNVAHSGSVFGLTWSPD--GTKIASASAD 260 (611)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--CEEEECBCTTSSSCSSSSCEEEEEECTT--SSEEEEEETT
T ss_pred eeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCC--cEeeeeccccccccccCCCEEEEEECCC--CCEEEEEeCC
Confidence 46789999999999999999999999999999998653 3445553 79999999999864 8999999999
Q ss_pred CeEEEEEcCCCCce----------------------------------------eEEEEecCCCCCeeEEEecCCCCCcE
Q 022111 79 GQVIIWKEGNQNDW----------------------------------------TQAHTFNDHKSSVNSIAWAPHELGLS 118 (302)
Q Consensus 79 ~~i~iwd~~~~~~~----------------------------------------~~~~~~~~h~~~i~~l~~~pd~~~~~ 118 (302)
++|++||+++.... .....+.+|...|.+++|+|+ +.+
T Consensus 261 ~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spd--g~~ 338 (611)
T 1nr0_A 261 KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSAD--GKT 338 (611)
T ss_dssp SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTT--SSE
T ss_pred CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCC--CCE
Confidence 99999998754211 122345689999999999998 779
Q ss_pred EEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCC-----------------------------------
Q 022111 119 LACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAP----------------------------------- 163 (302)
Q Consensus 119 l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~----------------------------------- 163 (302)
|++++.|++|++||+..... ...+...|...+.+++|++....
T Consensus 339 l~s~s~D~~v~~Wd~~~~~~--~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~ 416 (611)
T 1nr0_A 339 LFSADAEGHINSWDISTGIS--NRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLG 416 (611)
T ss_dssp EEEEETTSCEEEEETTTCCE--EECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEE
T ss_pred EEEEeCCCcEEEEECCCCce--eeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcE
Confidence 99999999999999875321 11122345556666665432100
Q ss_pred --------------------------------CceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCc
Q 022111 164 --------------------------------GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDW 211 (302)
Q Consensus 164 --------------------------------~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~ 211 (302)
.....+.+.+++++||+|+.|++|+|||+.++.. ..... .+|...
T Consensus 417 ~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~--~~~~~-~~h~~~ 493 (611)
T 1nr0_A 417 LAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASV--SEVKT-IVHPAE 493 (611)
T ss_dssp EEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEE--EEEEE-EECSSC
T ss_pred EEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCce--eeeec-cCCCCc
Confidence 0011233456688999999999999999986531 12233 679999
Q ss_pred eeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCc
Q 022111 212 VRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDG 290 (302)
Q Consensus 212 v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~ 290 (302)
|++|+|+|++ ++|++++.|++|++|++..............|...|++++|||||++||+|+.| .|++|+....+
T Consensus 494 v~~v~fspdg----~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 494 ITSVAFSNNG----AFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp EEEEEECTTS----SEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred eEEEEECCCC----CEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcc
Confidence 9999999995 789999999999999987532211111223488899999999999999999999 79999986543
No 24
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=9.1e-38 Score=273.36 Aligned_cols=245 Identities=17% Similarity=0.217 Sum_probs=202.7
Q ss_pred ccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCC--ceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEE
Q 022111 7 ETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSA--SQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIW 84 (302)
Q Consensus 7 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~--~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iw 84 (302)
+..|...|.+++|+|++++|++|+.|+.|++|++.... ......+.+|.+.|.+++|+++ ..+++++.|++|++|
T Consensus 93 ~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~l~s~s~d~~i~~w 169 (340)
T 1got_B 93 IPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD---NQIVTSSGDTTCALW 169 (340)
T ss_dssp EECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEET---TEEEEEETTSCEEEE
T ss_pred eecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCC---CcEEEEECCCcEEEE
Confidence 45788999999999999999999999999999986532 2345678899999999999753 468999999999999
Q ss_pred EcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCC
Q 022111 85 KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPG 164 (302)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 164 (302)
|++++ ....++.+|...|.+++|+|+ +.++++|+.|+.|++||++.... ...+ .+|...|.+++|+|++
T Consensus 170 d~~~~---~~~~~~~~h~~~v~~~~~~~~--~~~l~sg~~d~~v~~wd~~~~~~--~~~~-~~h~~~v~~v~~~p~~--- 238 (340)
T 1got_B 170 DIETG---QQTTTFTGHTGDVMSLSLAPD--TRLFVSGACDASAKLWDVREGMC--RQTF-TGHESDINAICFFPNG--- 238 (340)
T ss_dssp ETTTT---EEEEEECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTCSE--EEEE-CCCSSCEEEEEECTTS---
T ss_pred ECCCC---cEEEEEcCCCCceEEEEECCC--CCEEEEEeCCCcEEEEECCCCee--EEEE-cCCcCCEEEEEEcCCC---
Confidence 99775 466788899999999999998 66999999999999999875432 2333 3788999999999864
Q ss_pred ceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEecc
Q 022111 165 ALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAK 244 (302)
Q Consensus 165 ~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~ 244 (302)
..|++|+.|++|++||++++..... .....+...|.+++|+|++ .+|++|+.|+.|++||+..
T Consensus 239 -----------~~l~s~s~d~~v~iwd~~~~~~~~~--~~~~~~~~~v~~~~~s~~g----~~l~~g~~d~~i~vwd~~~ 301 (340)
T 1got_B 239 -----------NAFATGSDDATCRLFDLRADQELMT--YSHDNIICGITSVSFSKSG----RLLLAGYDDFNCNVWDALK 301 (340)
T ss_dssp -----------SEEEEEETTSCEEEEETTTTEEEEE--ECCTTCCSCEEEEEECTTS----SEEEEEETTSEEEEEETTT
T ss_pred -----------CEEEEEcCCCcEEEEECCCCcEEEE--EccCCcccceEEEEECCCC----CEEEEECCCCeEEEEEccc
Confidence 7899999999999999986532111 1122345579999999995 7899999999999999875
Q ss_pred CCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEee
Q 022111 245 EGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWK 285 (302)
Q Consensus 245 ~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~ 285 (302)
... ...+.+|..+|.+++|+|+|++|++|+.| .|+||+
T Consensus 302 ~~~---~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 302 ADR---AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CCE---EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CcE---eeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 432 23456888999999999999999999998 799996
No 25
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.7e-38 Score=296.61 Aligned_cols=251 Identities=23% Similarity=0.343 Sum_probs=202.9
Q ss_pred ccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCC----Ce
Q 022111 5 KIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYD----GQ 80 (302)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D----~~ 80 (302)
.++.+|...|++++|+|+|++||+|+.|++|+|||+..........+.+|.+.|.+++|+|+ +++|++++.+ ++
T Consensus 53 ~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~d--g~~l~~~~~~~~~~~~ 130 (611)
T 1nr0_A 53 EIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSE--SKRIAAVGEGRERFGH 130 (611)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTT--SCEEEEEECCSSCSEE
T ss_pred eEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCC--CCEEEEEECCCCceeE
Confidence 45679999999999999999999999999999999864433445678899999999999874 8899988875 47
Q ss_pred EEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCC
Q 022111 81 VIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA 160 (302)
Q Consensus 81 i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 160 (302)
|++||... ....+.+|...|.+++|+|+. ..+|++|+.|++|++||.... .....+ .+|...|.+++|+|+
T Consensus 131 v~~wd~~~-----~~~~l~gh~~~v~~v~f~p~~-~~~l~s~s~D~~v~lwd~~~~--~~~~~l-~~H~~~V~~v~fspd 201 (611)
T 1nr0_A 131 VFLFDTGT-----SNGNLTGQARAMNSVDFKPSR-PFRIISGSDDNTVAIFEGPPF--KFKSTF-GEHTKFVHSVRYNPD 201 (611)
T ss_dssp EEETTTCC-----BCBCCCCCSSCEEEEEECSSS-SCEEEEEETTSCEEEEETTTB--EEEEEE-CCCSSCEEEEEECTT
T ss_pred EEEeeCCC-----CcceecCCCCCceEEEECCCC-CeEEEEEeCCCeEEEEECCCC--eEeeee-ccccCceEEEEECCC
Confidence 88887432 345678999999999999983 246999999999999997542 122334 389999999999996
Q ss_pred CCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcccccccccc-------ccCCCceeEEEeeCCCCCCccEEEEEec
Q 022111 161 MAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPAL-------QMHSDWVRSVAWAPNLGLPKSTIASASQ 233 (302)
Q Consensus 161 ~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~-------~~h~~~v~~v~~~p~~~~~~~~l~s~s~ 233 (302)
+ ++|++|+.|++|+|||+.++. +...+ .+|.+.|.+++|+|++ .+|++++.
T Consensus 202 g--------------~~las~s~D~~i~lwd~~~g~----~~~~~~~~~~~~~~h~~~V~~v~~spdg----~~l~s~s~ 259 (611)
T 1nr0_A 202 G--------------SLFASTGGDGTIVLYNGVDGT----KTGVFEDDSLKNVAHSGSVFGLTWSPDG----TKIASASA 259 (611)
T ss_dssp S--------------SEEEEEETTSCEEEEETTTCC----EEEECBCTTSSSCSSSSCEEEEEECTTS----SEEEEEET
T ss_pred C--------------CEEEEEECCCcEEEEECCCCc----EeeeeccccccccccCCCEEEEEECCCC----CEEEEEeC
Confidence 4 789999999999999987663 22233 2799999999999995 78999999
Q ss_pred CCeEEEEEeccCCcce----------------------------------------eeeeeccCCCcEEEEEEccCCCEE
Q 022111 234 DGTVVIWTCAKEGEQW----------------------------------------EGRVLKDFKTPVWSVSWSLTGNLL 273 (302)
Q Consensus 234 D~~i~iwd~~~~~~~~----------------------------------------~~~~~~~~~~~v~~~~~spdg~~l 273 (302)
|++|++||++...... ....+.+|...|++++|+|||++|
T Consensus 260 D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l 339 (611)
T 1nr0_A 260 DKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTL 339 (611)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEE
Confidence 9999999987532100 001234677889999999999999
Q ss_pred EEecCC-ceEEeeecC
Q 022111 274 AVADAN-NVTLWKEAV 288 (302)
Q Consensus 274 a~~~~d-~i~~w~~~~ 288 (302)
++++.| .|++|+...
T Consensus 340 ~s~s~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 340 FSADAEGHINSWDIST 355 (611)
T ss_dssp EEEETTSCEEEEETTT
T ss_pred EEEeCCCcEEEEECCC
Confidence 999998 799999753
No 26
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.8e-37 Score=269.24 Aligned_cols=248 Identities=19% Similarity=0.284 Sum_probs=198.7
Q ss_pred cccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
.+.+|...|++++|++++++|++|+.|++|++||+.. .+.+..+.+|...|.+++|+++ +.+|++|+.|++|++||
T Consensus 60 ~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~--~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~D~~i~vwd 135 (319)
T 3frx_A 60 SFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVAT--GETYQRFVGHKSDVMSVDIDKK--ASMIISGSRDKTIKVWT 135 (319)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEECTT--SCEEEEEETTSCEEEEE
T ss_pred EEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCC--CCeeEEEccCCCcEEEEEEcCC--CCEEEEEeCCCeEEEEE
Confidence 4679999999999999999999999999999999865 4567788999999999999864 78999999999999999
Q ss_pred cCCCCceeEEEEecCCCCCeeEEEecCCC----CCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCC
Q 022111 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHE----LGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAM 161 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~i~~l~~~pd~----~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 161 (302)
++.. +...+.+|...|.++.|+|.. .+..+++++.|+.|++||+.... ....+ .+|...|.+++|+|+
T Consensus 136 ~~~~----~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~--~~~~~-~~h~~~v~~~~~sp~- 207 (319)
T 3frx_A 136 IKGQ----CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ--IEADF-IGHNSNINTLTASPD- 207 (319)
T ss_dssp TTSC----EEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE--EEEEE-CCCCSCEEEEEECTT-
T ss_pred CCCC----eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch--hheee-cCCCCcEEEEEEcCC-
Confidence 8643 567788999999999999853 24589999999999999987432 22233 379999999999986
Q ss_pred CCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEE
Q 022111 162 APGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWT 241 (302)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd 241 (302)
+++|++|+.|++|+|||+.++. ++..+.. ...|.+++|+|++ ..|++++. ..+++|+
T Consensus 208 -------------g~~l~s~~~dg~i~iwd~~~~~----~~~~~~~-~~~v~~~~~sp~~----~~la~~~~-~~i~v~~ 264 (319)
T 3frx_A 208 -------------GTLIASAGKDGEIMLWNLAAKK----AMYTLSA-QDEVFSLAFSPNR----YWLAAATA-TGIKVFS 264 (319)
T ss_dssp -------------SSEEEEEETTCEEEEEETTTTE----EEEEEEC-CSCEEEEEECSSS----SEEEEEET-TEEEEEE
T ss_pred -------------CCEEEEEeCCCeEEEEECCCCc----EEEEecC-CCcEEEEEEcCCC----CEEEEEcC-CCcEEEE
Confidence 4799999999999999998763 3344443 4679999999995 66777664 5699999
Q ss_pred eccCCcceee--e---eeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecC
Q 022111 242 CAKEGEQWEG--R---VLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAV 288 (302)
Q Consensus 242 ~~~~~~~~~~--~---~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~ 288 (302)
+......... . ....+...+.+++|||||++|++|+.| .|++|+...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 265 LDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp ETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred eCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 8643111000 0 012334579999999999999999998 799999753
No 27
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-38 Score=303.83 Aligned_cols=289 Identities=45% Similarity=0.826 Sum_probs=224.5
Q ss_pred ccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEE
Q 022111 5 KIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIW 84 (302)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iw 84 (302)
.++.+|.+.|++++|+|++++|++|+.||+|++|++.......+..+.+|.+.|++++|+++.++++|++|+.|++|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 46789999999999999999999999999999999976556677889999999999999876558899999999999999
Q ss_pred EcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCC
Q 022111 85 KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPG 164 (302)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 164 (302)
|+.++ .......+..|...|.+++|+|+..+..+++|+.|+.|++||+..........+ ..|...|.++.|+|.....
T Consensus 83 d~~~~-~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~-~~~~~~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 83 KEENG-RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII-DAHAIGVNSASWAPATIEE 160 (753)
T ss_dssp EEETT-EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEE-ECCSSCEEEEEECCCC---
T ss_pred ECCCC-cccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEe-ecCCCceEEEEecCccccc
Confidence 99764 234567788899999999999974356899999999999999986533333333 3788899999999852111
Q ss_pred ceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEecc
Q 022111 165 ALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAK 244 (302)
Q Consensus 165 ~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~ 244 (302)
.. .....+++..|++|+.|+.|++||++++.....+...+.+|...|.+++|+|+. ..+..|++++.||.|++||++.
T Consensus 161 ~~-~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~-~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 161 DG-EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV-LLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp -------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC-SSSEEEEEEESSSCEEEEEESS
T ss_pred cc-ccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCC-CCCCEEEEEecCCEEEEecCCC
Confidence 00 000112357899999999999999987654434556778999999999999982 0127899999999999999986
Q ss_pred CCcceeeee--eccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCceEEEeee
Q 022111 245 EGEQWEGRV--LKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQVSV 297 (302)
Q Consensus 245 ~~~~~~~~~--~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~~~~~~~ 297 (302)
......... ...+...|++++|+|+|++|++++.| .|++|+....+.|.+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~~~~~~~~ 294 (753)
T 3jro_A 239 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGE 294 (753)
T ss_dssp SSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSSCCBCCCC
T ss_pred CCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCCCcccccc
Confidence 432211111 23467789999999999999999888 699999987777765543
No 28
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=272.18 Aligned_cols=251 Identities=17% Similarity=0.168 Sum_probs=191.4
Q ss_pred cccccceeEEEEccCCCEEEEeeCCCcEEEEeecC---------CCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCC
Q 022111 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSN---------SASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYD 78 (302)
Q Consensus 8 ~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~---------~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D 78 (302)
..|+..|.+++|+|||++|++++ |+++|+||... ...........|...|.+++|+++ ..|++|+.|
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d---~~l~~~s~d 102 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE---RGILVASDS 102 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT---TEEEEEETT
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC---CeEEEEECC
Confidence 35778899999999999999887 77888887320 001111222346778999999864 578899999
Q ss_pred CeEEEEEcCCCCcee-EEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEe
Q 022111 79 GQVIIWKEGNQNDWT-QAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSW 157 (302)
Q Consensus 79 ~~i~iwd~~~~~~~~-~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 157 (302)
++|+|||++++.... ....+.+|.+.|++++|+|+ +.+|++|+.|++|++||+.+.. ....+ .+|...|.+++|
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spd--g~~l~sgs~d~~i~iwd~~~~~--~~~~~-~~h~~~V~~~~~ 177 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSS--GTQAVSGSKDICIKVWDLAQQV--VLSSY-RAHAAQVTCVAA 177 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTTE--EEEEE-CCCSSCEEEEEE
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCC--CCEEEEEeCCCeEEEEECCCCc--EEEEE-cCcCCceEEEEe
Confidence 999999997764322 22345689999999999998 7799999999999999987542 23344 389999999999
Q ss_pred CCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeE
Q 022111 158 APAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237 (302)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i 237 (302)
+|++ ..+|++|+.|++|+|||++++..... .....|...+.+++|+|++ +.+|++|+.|++|
T Consensus 178 ~~~~-------------~~~l~s~s~D~~v~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~p~~---~~~l~sg~~dg~v 239 (344)
T 4gqb_B 178 SPHK-------------DSVFLSCSEDNRILLWDTRCPKPASQ--IGCSAPGYLPTSLAWHPQQ---SEVFVFGDENGTV 239 (344)
T ss_dssp CSSC-------------TTEEEEEETTSCEEEEETTSSSCEEE--CC----CCCEEEEEECSSC---TTEEEEEETTSEE
T ss_pred cCCC-------------CCceeeeccccccccccccccceeee--eecceeeccceeeeecCCC---CcceEEeccCCcE
Confidence 9864 25789999999999999987632111 1123466779999999975 4789999999999
Q ss_pred EEEEeccCCcceeeeeeccCCCcEEEEEEccCC-CEEEEecCC-ceEEeeecC
Q 022111 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTG-NLLAVADAN-NVTLWKEAV 288 (302)
Q Consensus 238 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg-~~la~~~~d-~i~~w~~~~ 288 (302)
+|||++.... ...+..|...|.+++|+|+| ++||+++.| .|+|||...
T Consensus 240 ~~wd~~~~~~---~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~ 289 (344)
T 4gqb_B 240 SLVDTKSTSC---VLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL 289 (344)
T ss_dssp EEEESCC--C---CEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC
T ss_pred EEEECCCCcE---EEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Confidence 9999986432 23346788899999999998 578999888 799999764
No 29
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.9e-37 Score=295.71 Aligned_cols=255 Identities=23% Similarity=0.357 Sum_probs=208.2
Q ss_pred cccccccceeEEEEccCC-CEEEEeeCCCcEEEEeecCCC---ceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeE
Q 022111 6 IETGHEDTVHDVAMDFYG-KRLATASSDSSIKIIGLSNSA---SQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQV 81 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~v~lw~~~~~~---~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i 81 (302)
.+.+|++.|++++|++++ ++|+||+.|++|++|++.... ......+.+|...|.+++|+++ +++|+||+.|++|
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~--g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSD--GQFALSGSWDGEL 454 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTT--SSEEEEEETTSEE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCC--CCEEEEEeCCCcE
Confidence 466999999999999875 799999999999999986432 2345678899999999999864 8999999999999
Q ss_pred EEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCC
Q 022111 82 IIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAM 161 (302)
Q Consensus 82 ~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 161 (302)
+|||+.++ .....+.+|...|.+++|+|+ +.+|++|+.|++|++||..............+|...|.+++|+|+.
T Consensus 455 ~vwd~~~~---~~~~~~~~h~~~v~~~~~s~~--~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 529 (694)
T 3dm0_A 455 RLWDLAAG---VSTRRFVGHTKDVLSVAFSLD--NRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT 529 (694)
T ss_dssp EEEETTTT---EEEEEEECCSSCEEEEEECTT--SSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCS
T ss_pred EEEECCCC---cceeEEeCCCCCEEEEEEeCC--CCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCC
Confidence 99999765 356778899999999999998 6689999999999999975332222222223688889999999864
Q ss_pred CCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEE
Q 022111 162 APGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWT 241 (302)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd 241 (302)
. ...|++|+.|++|++||+++. .+...+.+|.+.|++++|+|++ ++|++|+.|++|++||
T Consensus 530 ~------------~~~l~s~s~d~~v~vwd~~~~----~~~~~~~~h~~~v~~v~~spdg----~~l~sg~~Dg~i~iwd 589 (694)
T 3dm0_A 530 L------------QPTIVSASWDKTVKVWNLSNC----KLRSTLAGHTGYVSTVAVSPDG----SLCASGGKDGVVLLWD 589 (694)
T ss_dssp S------------SCEEEEEETTSCEEEEETTTC----CEEEEECCCSSCEEEEEECTTS----SEEEEEETTSBCEEEE
T ss_pred C------------cceEEEEeCCCeEEEEECCCC----cEEEEEcCCCCCEEEEEEeCCC----CEEEEEeCCCeEEEEE
Confidence 1 257999999999999999865 3456778999999999999985 7899999999999999
Q ss_pred eccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCCceEEeeecCCce
Q 022111 242 CAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVDGE 291 (302)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d~i~~w~~~~~~~ 291 (302)
++.... .........|.+++|+|++.+|+++++++|++|+......
T Consensus 590 ~~~~~~----~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 590 LAEGKK----LYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSI 635 (694)
T ss_dssp TTTTEE----EECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEE
T ss_pred CCCCce----EEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCC
Confidence 976421 1112345679999999999999998877999999865433
No 30
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.1e-37 Score=281.66 Aligned_cols=257 Identities=14% Similarity=0.170 Sum_probs=195.0
Q ss_pred ccccccceeEEEEcc-CCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 7 ETGHEDTVHDVAMDF-YGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 7 ~~~h~~~v~~~~~s~-~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
..+|...|++++|+| ++++||+|+.||+|+|||+..........+.+|.+.|++|+|+|. ++++|+||+.|++|++||
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~-~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPL-NTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp EEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSS-CTTEEEEECSSSCEEEEE
T ss_pred CCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCC-CCCEEEEEeCCCEEEEee
Confidence 447888999999998 567999999999999999976555556667899999999999753 478999999999999999
Q ss_pred cCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCc
Q 022111 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 165 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 165 (302)
++... .........+...+.+++|+|+ +.+|++|+.|+.|++||++.. ....+ .+|...|.+++|+|..
T Consensus 194 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~l~~g~~dg~i~~wd~~~~---~~~~~-~~h~~~v~~v~~~p~~---- 262 (435)
T 4e54_B 194 FKGNI-LRVFASSDTINIWFCSLDVSAS--SRMVVTGDNVGNVILLNMDGK---ELWNL-RMHKKKVTHVALNPCC---- 262 (435)
T ss_dssp TTSCE-EEEEECCSSCSCCCCCEEEETT--TTEEEEECSSSBEEEEESSSC---BCCCS-BCCSSCEEEEEECTTC----
T ss_pred ccCCc-eeEEeccCCCCccEEEEEECCC--CCEEEEEeCCCcEeeeccCcc---eeEEE-ecccceEEeeeecCCC----
Confidence 97542 1122222234556789999998 679999999999999998632 22233 3789999999999864
Q ss_pred eeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccC
Q 022111 166 LVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKE 245 (302)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~ 245 (302)
..+|++|+.|++|+|||+++.... ..+....+|...|++++|+|++ .+|++++.|+.|+|||++..
T Consensus 263 ---------~~~~~s~s~d~~v~iwd~~~~~~~-~~~~~~~~h~~~v~~~~~spdg----~~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 263 ---------DWFLATASVDQTVKIWDLRQVRGK-ASFLYSLPHRHPVNAACFSPDG----ARLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp ---------SSEEEEEETTSBCCEEETTTCCSS-SCCSBCCBCSSCEEECCBCTTS----SEEEEEESSSCEEEEESSSS
T ss_pred ---------ceEEEEecCcceeeEEeccccccc-ceEEEeeeccccccceeECCCC----CeeEEEcCCCEEEEEECCCC
Confidence 357899999999999999865322 1223446899999999999985 78999999999999998642
Q ss_pred Ccce--------------------e--------------------------e------------eeeccCCCcEEEE-EE
Q 022111 246 GEQW--------------------E--------------------------G------------RVLKDFKTPVWSV-SW 266 (302)
Q Consensus 246 ~~~~--------------------~--------------------------~------------~~~~~~~~~v~~~-~~ 266 (302)
.... . . .+...+...|.++ +|
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~f 408 (435)
T 4e54_B 329 DCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEF 408 (435)
T ss_dssp SSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEE
T ss_pred ccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEE
Confidence 1000 0 0 0001223345555 79
Q ss_pred ccCCCEEEEecCCceEEeeecCC
Q 022111 267 SLTGNLLAVADANNVTLWKEAVD 289 (302)
Q Consensus 267 spdg~~la~~~~d~i~~w~~~~~ 289 (302)
||+|++||+|++++|+||+..+.
T Consensus 409 spdg~~lasg~d~~i~iW~~~~g 431 (435)
T 4e54_B 409 NPMGDTLASAMGYHILIWSQQEA 431 (435)
T ss_dssp CTTSSCEEEECSSEEEECCCC--
T ss_pred CCCCCEEEEEcCCcEEEEECCcC
Confidence 99999999998669999997643
No 31
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.7e-37 Score=271.43 Aligned_cols=252 Identities=18% Similarity=0.225 Sum_probs=191.8
Q ss_pred cccccceeEEEEccCCCEEEEeeC------CCcEEEEeecCCC--ceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCC
Q 022111 8 TGHEDTVHDVAMDFYGKRLATASS------DSSIKIIGLSNSA--SQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDG 79 (302)
Q Consensus 8 ~~h~~~v~~~~~s~~~~~l~s~~~------d~~v~lw~~~~~~--~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~ 79 (302)
..|+..|++++|+|||++||+|+. |++|++|+..... ........+|...|.+++|+++ + .+++++.|+
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d--~-~~l~~s~dg 115 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSE--K-GILVASDSG 115 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETT--T-EEEEEETTS
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCC--C-CEEEEECCC
Confidence 469999999999999999999997 6778888864322 1122344578899999999874 4 566789999
Q ss_pred eEEEEEcCCCCce-eEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeC
Q 022111 80 QVIIWKEGNQNDW-TQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWA 158 (302)
Q Consensus 80 ~i~iwd~~~~~~~-~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 158 (302)
+|+|||+.++... .......+|...|.+++|+|+ +.+|++|+.|+.|++||..+.. ....+ .+|...|.+++|+
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spd--g~~l~sgs~dg~v~iwd~~~~~--~~~~~-~~h~~~v~~v~~s 190 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSD--GTQAVSGGKDFSVKVWDLSQKA--VLKSY-NAHSSEVNCVAAC 190 (357)
T ss_dssp CEEEC--------CCCCEEECCCSSCEEEEEECSS--SSEEEEEETTSCEEEEETTTTE--EEEEE-CCCSSCEEEEEEC
T ss_pred EEEEeeccccceeEEEeeccCCCCCCEEEEEECCC--CCEEEEEeCCCeEEEEECCCCc--EEEEE-cCCCCCEEEEEEc
Confidence 9999998765321 112234579999999999998 6799999999999999987542 22344 3789999999999
Q ss_pred CCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEE
Q 022111 159 PAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVV 238 (302)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~ 238 (302)
|+. ...+++++.|++|+|||++++... ....+..|...|.+++|+|++ +..|++|+.|+.|+
T Consensus 191 ~~~-------------~~~~~s~~~dg~v~~wd~~~~~~~--~~~~~~~~~~~v~~v~~sp~~---~~~la~g~~d~~i~ 252 (357)
T 4g56_B 191 PGK-------------DTIFLSCGEDGRILLWDTRKPKPA--TRIDFCASDTIPTSVTWHPEK---DDTFACGDETGNVS 252 (357)
T ss_dssp TTC-------------SSCEEEEETTSCEEECCTTSSSCB--CBCCCTTCCSCEEEEEECTTS---TTEEEEEESSSCEE
T ss_pred cCC-------------CceeeeeccCCceEEEECCCCcee--eeeeeccccccccchhhhhcc---cceEEEeeccccee
Confidence 864 257899999999999999876321 112345678889999999985 47899999999999
Q ss_pred EEEeccCCcceeeeeeccCCCcEEEEEEccCC-CEEEEecCC-ceEEeeecC
Q 022111 239 IWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTG-NLLAVADAN-NVTLWKEAV 288 (302)
Q Consensus 239 iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg-~~la~~~~d-~i~~w~~~~ 288 (302)
+||++.... ...+..+...|.+++|+|++ ++||+++.| .|+|||...
T Consensus 253 ~wd~~~~~~---~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~ 301 (357)
T 4g56_B 253 LVNIKNPDS---AQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF 301 (357)
T ss_dssp EEESSCGGG---CEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS
T ss_pred EEECCCCcE---eEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC
Confidence 999976432 23446778899999999987 678999888 799999764
No 32
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.3e-36 Score=264.71 Aligned_cols=250 Identities=18% Similarity=0.256 Sum_probs=193.0
Q ss_pred cccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
.+.+|...|++++|+|++.+|++|+.|++|++||+... +.+..+.+|...|.+++|+++ +++|++++.|++|++||
T Consensus 71 ~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~--~~~~~~~~h~~~v~~v~~sp~--~~~l~s~~~d~~i~~wd 146 (343)
T 2xzm_R 71 ALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTG--TTYKRFVGHQSEVYSVAFSPD--NRQILSAGAEREIKLWN 146 (343)
T ss_dssp EECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSS--CEEEEEECCCSCEEEEEECSS--TTEEEEEETTSCEEEEE
T ss_pred hhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC--cEEEEEcCCCCcEEEEEECCC--CCEEEEEcCCCEEEEEe
Confidence 46789999999999999999999999999999998653 466788899999999999864 78999999999999999
Q ss_pred cCCCCceeEEEEecCCCCCeeEEEecCCCC--------CcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEe
Q 022111 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHEL--------GLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSW 157 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~--------~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 157 (302)
+.... .........|...|.+++|+|+.. +.++++++.|+.|++||.. . .....+ .+|...|.+++|
T Consensus 147 ~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~-~~~~~~-~~h~~~v~~~~~ 221 (343)
T 2xzm_R 147 ILGEC-KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN--F-QIRYTF-KAHESNVNHLSI 221 (343)
T ss_dssp SSSCE-EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT--T-EEEEEE-ECCSSCEEEEEE
T ss_pred ccCCc-eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC--C-ceeEEE-cCccccceEEEE
Confidence 86421 111112236889999999999731 1589999999999999943 1 122233 378899999999
Q ss_pred CCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeE
Q 022111 158 APAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237 (302)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i 237 (302)
+|++ ++|++|+.|+.|++||+..... ....+ .+...|.+++|+|++ .++ +++.|+.|
T Consensus 222 s~~g--------------~~l~sgs~dg~v~iwd~~~~~~---~~~~~-~~~~~v~~v~~sp~~----~~l-a~~~d~~v 278 (343)
T 2xzm_R 222 SPNG--------------KYIATGGKDKKLLIWDILNLTY---PQREF-DAGSTINQIAFNPKL----QWV-AVGTDQGV 278 (343)
T ss_dssp CTTS--------------SEEEEEETTCEEEEEESSCCSS---CSEEE-ECSSCEEEEEECSSS----CEE-EEEESSCE
T ss_pred CCCC--------------CEEEEEcCCCeEEEEECCCCcc---cceee-cCCCcEEEEEECCCC----CEE-EEECCCCE
Confidence 9864 7899999999999999854321 11122 345679999999985 445 56678889
Q ss_pred EEEEeccCCcceeeee----------eccCCCcEEEEEEccCCCEEEEecCC-ceEEeeec
Q 022111 238 VIWTCAKEGEQWEGRV----------LKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEA 287 (302)
Q Consensus 238 ~iwd~~~~~~~~~~~~----------~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~ 287 (302)
++||+..........+ ..++...|.+++|+|+|++|++|+.| .|++|+..
T Consensus 279 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 279 KIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp EEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEE
T ss_pred EEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEE
Confidence 9999875322110011 12466779999999999999999988 79999974
No 33
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-36 Score=269.49 Aligned_cols=247 Identities=26% Similarity=0.338 Sum_probs=197.6
Q ss_pred ccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCC
Q 022111 11 EDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQN 90 (302)
Q Consensus 11 ~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~ 90 (302)
...|++++|+|++++||+|+.|++|+|||+.. .+.+..+.+|...|++++|+++ +++|++++.|++|++||++++.
T Consensus 123 ~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~--~~~~~~~~~h~~~v~~~~~~p~--~~~l~s~s~d~~v~iwd~~~~~ 198 (393)
T 1erj_A 123 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN--RKIVMILQGHEQDIYSLDYFPS--GDKLVSGSGDRTVRIWDLRTGQ 198 (393)
T ss_dssp CCBEEEEEECTTSSEEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTE
T ss_pred ceeEEEEEECCCCCEEEEEcCCCeEEEEECCC--CcEEEEEccCCCCEEEEEEcCC--CCEEEEecCCCcEEEEECCCCe
Confidence 34599999999999999999999999999865 4567788999999999999864 7899999999999999997753
Q ss_pred ceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeee----eecccCCCCeEEEEeCCCCCCCce
Q 022111 91 DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTT----RIDQAHPVGVTSVSWAPAMAPGAL 166 (302)
Q Consensus 91 ~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~----~~~~~h~~~v~~~~~~~~~~~~~~ 166 (302)
....+. +...+.+++|+|.. +.+|++|+.|+.|++||.......... ....+|...|.+++|+|++
T Consensus 199 ---~~~~~~-~~~~v~~~~~~~~~-~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g----- 268 (393)
T 1erj_A 199 ---CSLTLS-IEDGVTTVAVSPGD-GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG----- 268 (393)
T ss_dssp ---EEEEEE-CSSCEEEEEECSTT-CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTS-----
T ss_pred ---eEEEEE-cCCCcEEEEEECCC-CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCC-----
Confidence 344444 66789999999942 679999999999999998754322111 0113688899999999864
Q ss_pred eecccCCCceeEEEeeCCCcEEEEEEecCcc--------ccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEE
Q 022111 167 VGLGLLDPVQKLASCGCDNTVKVWKMYNGIW--------KMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVV 238 (302)
Q Consensus 167 ~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~--------~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~ 238 (302)
.+|++|+.|++|++||+++... ...+...+.+|.+.|.+++|+|++ .+|++|+.|+.|+
T Consensus 269 ---------~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----~~l~sgs~D~~v~ 335 (393)
T 1erj_A 269 ---------QSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND----EYILSGSKDRGVL 335 (393)
T ss_dssp ---------SEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGG----CEEEEEETTSEEE
T ss_pred ---------CEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCC----CEEEEEeCCCeEE
Confidence 7899999999999999875321 112344677899999999999985 7899999999999
Q ss_pred EEEeccCCcceeeeeeccCCCcEEEEEEcc------CCCEEEEecCC-ceEEeeec
Q 022111 239 IWTCAKEGEQWEGRVLKDFKTPVWSVSWSL------TGNLLAVADAN-NVTLWKEA 287 (302)
Q Consensus 239 iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp------dg~~la~~~~d-~i~~w~~~ 287 (302)
+||++.... ...+.+|...|.+++|+| ++++|++|+.| .|++|+..
T Consensus 336 iwd~~~~~~---~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 336 FWDKKSGNP---LLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp EEETTTCCE---EEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred EEECCCCeE---EEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 999876431 234567888999999886 68999999998 79999974
No 34
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.1e-36 Score=258.57 Aligned_cols=250 Identities=23% Similarity=0.357 Sum_probs=200.4
Q ss_pred ccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEE
Q 022111 5 KIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIW 84 (302)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iw 84 (302)
.++.+|.+.|++++|+|++++|++|+.|++|++|+.... +....+.+|...|.+++|+++ +++|++++.|+.|++|
T Consensus 17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~--~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--KFEKTISGHKLGISDVAWSSD--SNLLVSASDDKTLKIW 92 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEE
T ss_pred EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCc--ccchhhccCCCceEEEEEcCC--CCEEEEECCCCEEEEE
Confidence 346799999999999999999999999999999998653 456678899999999999864 7999999999999999
Q ss_pred EcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCC
Q 022111 85 KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPG 164 (302)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 164 (302)
|+++. .....+.+|...|.+++|+|+ +.+|++|+.|+.|++||++.... ...+ ..|...+.++.|+|++
T Consensus 93 d~~~~---~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~i~iwd~~~~~~--~~~~-~~~~~~v~~~~~~~~~--- 161 (312)
T 4ery_A 93 DVSSG---KCLKTLKGHSNYVFCCNFNPQ--SNLIVSGSFDESVRIWDVKTGKC--LKTL-PAHSDPVSAVHFNRDG--- 161 (312)
T ss_dssp ETTTC---CEEEEEECCSSCEEEEEECSS--SSEEEEEETTSCEEEEETTTCCE--EEEE-CCCSSCEEEEEECTTS---
T ss_pred ECCCC---cEEEEEcCCCCCEEEEEEcCC--CCEEEEEeCCCcEEEEECCCCEE--EEEe-cCCCCcEEEEEEcCCC---
Confidence 99775 356778889999999999998 66999999999999999875432 2333 3688899999999863
Q ss_pred ceeecccCCCceeEEEeeCCCcEEEEEEecCcccccccccc-ccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEec
Q 022111 165 ALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPAL-QMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCA 243 (302)
Q Consensus 165 ~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~ 243 (302)
.+|++++.|+.|++||++++. .+..+ ..|...+.+++|+|++ .+|++++.|+.|++||++
T Consensus 162 -----------~~l~~~~~d~~i~~wd~~~~~----~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~d~~i~iwd~~ 222 (312)
T 4ery_A 162 -----------SLIVSSSYDGLCRIWDTASGQ----CLKTLIDDDNPPVSFVKFSPNG----KYILAATLDNTLKLWDYS 222 (312)
T ss_dssp -----------SEEEEEETTSCEEEEETTTCC----EEEEECCSSCCCEEEEEECTTS----SEEEEEETTTEEEEEETT
T ss_pred -----------CEEEEEeCCCcEEEEECCCCc----eeeEEeccCCCceEEEEECCCC----CEEEEEcCCCeEEEEECC
Confidence 789999999999999998753 22222 3567789999999985 789999999999999997
Q ss_pred cCCcceeeeeeccCCCcE--EEEEEc-cCCCEEEEecCC-ceEEeeecCCce
Q 022111 244 KEGEQWEGRVLKDFKTPV--WSVSWS-LTGNLLAVADAN-NVTLWKEAVDGE 291 (302)
Q Consensus 244 ~~~~~~~~~~~~~~~~~v--~~~~~s-pdg~~la~~~~d-~i~~w~~~~~~~ 291 (302)
.... ......+.... ....|+ +++++|++++.| .|++|+......
T Consensus 223 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~ 271 (312)
T 4ery_A 223 KGKC---LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 271 (312)
T ss_dssp TTEE---EEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCE
T ss_pred CCcE---EEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchh
Confidence 5421 12223333322 223444 678999999988 799999865443
No 35
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.2e-36 Score=268.70 Aligned_cols=252 Identities=21% Similarity=0.305 Sum_probs=195.1
Q ss_pred ccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcc------------------cCeEEEEeeCCCCCC
Q 022111 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHR------------------GPVWQVAWAHPKFGS 70 (302)
Q Consensus 9 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~------------------~~v~~v~~~~~~~~~ 70 (302)
+|...|.+++|+|||++||+|+ |+++++|++..+ +.+..+.+|. ..|++++|+++ ++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d--g~ 136 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDG--SLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD--GK 136 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTC--CEEEEECC-----------------CCCCBEEEEEECTT--SS
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCC--CEEEEecCccccccccccccccccCCCceeEEEEEECCC--CC
Confidence 6999999999999999999876 789999998653 3444554443 24899999864 89
Q ss_pred EEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCC
Q 022111 71 ILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPV 150 (302)
Q Consensus 71 ~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~ 150 (302)
+|++|+.|++|++||+++. .....+.+|...|.+++|+|+ +.+|++|+.|++|++||++.... ...+ .+..
T Consensus 137 ~l~s~~~d~~i~iwd~~~~---~~~~~~~~h~~~v~~~~~~p~--~~~l~s~s~d~~v~iwd~~~~~~--~~~~--~~~~ 207 (393)
T 1erj_A 137 FLATGAEDRLIRIWDIENR---KIVMILQGHEQDIYSLDYFPS--GDKLVSGSGDRTVRIWDLRTGQC--SLTL--SIED 207 (393)
T ss_dssp EEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTEE--EEEE--ECSS
T ss_pred EEEEEcCCCeEEEEECCCC---cEEEEEccCCCCEEEEEEcCC--CCEEEEecCCCcEEEEECCCCee--EEEE--EcCC
Confidence 9999999999999999765 456778899999999999998 66899999999999999875421 1222 3556
Q ss_pred CeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcccccc---ccccccCCCceeEEEeeCCCCCCccE
Q 022111 151 GVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDC---FPALQMHSDWVRSVAWAPNLGLPKST 227 (302)
Q Consensus 151 ~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~---~~~~~~h~~~v~~v~~~p~~~~~~~~ 227 (302)
.+.+++|+|.. +.+|++|+.|+.|++||+.++...... .....+|...|.+++|+|++ ..
T Consensus 208 ~v~~~~~~~~~-------------~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g----~~ 270 (393)
T 1erj_A 208 GVTTVAVSPGD-------------GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG----QS 270 (393)
T ss_dssp CEEEEEECSTT-------------CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTS----SE
T ss_pred CcEEEEEECCC-------------CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCC----CE
Confidence 78999999832 478999999999999998765321110 11236899999999999985 78
Q ss_pred EEEEecCCeEEEEEeccCCcc---------eeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCce
Q 022111 228 IASASQDGTVVIWTCAKEGEQ---------WEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGE 291 (302)
Q Consensus 228 l~s~s~D~~i~iwd~~~~~~~---------~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~ 291 (302)
|++|+.|++|++||++..... .......+|...|.+++|+|++++|++++.| .|++|+......
T Consensus 271 l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~ 344 (393)
T 1erj_A 271 VVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP 344 (393)
T ss_dssp EEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeE
Confidence 999999999999998753210 0112235677889999999999999999998 799999765443
No 36
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.5e-35 Score=260.54 Aligned_cols=265 Identities=20% Similarity=0.300 Sum_probs=214.1
Q ss_pred cccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
++..|+.+|++++|+|++++|++++.|+.|++|++.....+.+..+.+|...|.+++|+++ +++|++++.|+.|++||
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~dg~i~vwd 80 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPD--SNRIVTCGTDRNAYVWT 80 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETT--TTEEEEEETTSCEEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCC--CCEEEEEcCCCeEEEEE
Confidence 4556999999999999999999999999999999976543467788899999999999874 78999999999999999
Q ss_pred cCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeee-eeecccCCCCeEEEEeCCCCCCC
Q 022111 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDT-TRIDQAHPVGVTSVSWAPAMAPG 164 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~ 164 (302)
+++.. ......+..|...|.+++|+|+ +.+|++++.|+.|++|++.....+.. ..+...|...+.+++|+|++
T Consensus 81 ~~~~~-~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--- 154 (372)
T 1k8k_C 81 LKGRT-WKPTLVILRINRAARCVRWAPN--EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNS--- 154 (372)
T ss_dssp EETTE-EEEEEECCCCSSCEEEEEECTT--SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTS---
T ss_pred CCCCe-eeeeEEeecCCCceeEEEECCC--CCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCC---
Confidence 96642 2334445679999999999998 67999999999999999986554322 33334788899999999863
Q ss_pred ceeecccCCCceeEEEeeCCCcEEEEEEecCc--------------cccccccccccCCCceeEEEeeCCCCCCccEEEE
Q 022111 165 ALVGLGLLDPVQKLASCGCDNTVKVWKMYNGI--------------WKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIAS 230 (302)
Q Consensus 165 ~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~--------------~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s 230 (302)
.+|++++.|+.|++||++... ....++..+.+|...|.+++|+|++ ..|++
T Consensus 155 -----------~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~ 219 (372)
T 1k8k_C 155 -----------VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANG----SRVAW 219 (372)
T ss_dssp -----------SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSS----SEEEE
T ss_pred -----------CEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCC----CEEEE
Confidence 789999999999999974210 0113445677899999999999985 78999
Q ss_pred EecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCCceEEeeecC-CceEEEee
Q 022111 231 ASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAV-DGEWQQVS 296 (302)
Q Consensus 231 ~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d~i~~w~~~~-~~~~~~~~ 296 (302)
++.|+.|++||++.... ......+..+|.+++|+|+|++|+++.++.|++|+... ++.|....
T Consensus 220 ~~~d~~i~i~d~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~ 283 (372)
T 1k8k_C 220 VSHDSTVCLADADKKMA---VATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGG 283 (372)
T ss_dssp EETTTEEEEEEGGGTTE---EEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECC
T ss_pred EeCCCEEEEEECCCCce---eEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEee
Confidence 99999999999986432 22335667789999999999999998545899999854 36676543
No 37
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.2e-37 Score=274.99 Aligned_cols=254 Identities=19% Similarity=0.258 Sum_probs=201.0
Q ss_pred cccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCC-----ceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCe
Q 022111 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSA-----SQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQ 80 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~-----~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~ 80 (302)
.+.+|...|.+++|+|++++||+|+.|+.+++|++.... ......+.+|.+.|.++.|.++ .+.+|++|+.|++
T Consensus 103 ~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~-~~~~l~s~s~D~~ 181 (380)
T 3iz6_a 103 AIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPD-QETRLITGSGDQT 181 (380)
T ss_dssp EEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSS-SSSCEEEECTTSC
T ss_pred EEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecC-CCCEEEEECCCCc
Confidence 356799999999999999999999999999999985421 1223467899999999999764 3568999999999
Q ss_pred EEEEEcCCCCceeEEEEe-----cCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEE
Q 022111 81 VIIWKEGNQNDWTQAHTF-----NDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSV 155 (302)
Q Consensus 81 i~iwd~~~~~~~~~~~~~-----~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~ 155 (302)
|++||++++. .+..+ .+|...|.+++|+|.. +.++++|+.|++|++||++.... ....+ .+|...|.++
T Consensus 182 i~~wd~~~~~---~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~sgs~D~~v~~wd~~~~~~-~~~~~-~~h~~~v~~v 255 (380)
T 3iz6_a 182 CVLWDVTTGQ---RISIFGSEFPSGHTADVLSLSINSLN-ANMFISGSCDTTVRLWDLRITSR-AVRTY-HGHEGDINSV 255 (380)
T ss_dssp EEEECTTTCC---EEEEECCCSSSSCCSCEEEEEECSSS-CCEEEEEETTSCEEEEETTTTCC-CCEEE-CCCSSCCCEE
T ss_pred EEEEEcCCCc---EEEEeecccCCCCccCeEEEEeecCC-CCEEEEEECCCeEEEEECCCCCc-ceEEE-CCcCCCeEEE
Confidence 9999998764 33344 5799999999998742 56899999999999999874322 12233 3799999999
Q ss_pred EeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccc-------cCCCceeEEEeeCCCCCCccEE
Q 022111 156 SWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQ-------MHSDWVRSVAWAPNLGLPKSTI 228 (302)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~-------~h~~~v~~v~~~p~~~~~~~~l 228 (302)
+|+|++ .+|+||+.|++|+|||++++.. +..+. .+...|.+++|+|++ .+|
T Consensus 256 ~~~p~~--------------~~l~s~s~D~~i~lwd~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~s~~g----~~l 313 (380)
T 3iz6_a 256 KFFPDG--------------QRFGTGSDDGTCRLFDMRTGHQ----LQVYNREPDRNDNELPIVTSVAFSISG----RLL 313 (380)
T ss_dssp EECTTS--------------SEEEEECSSSCEEEEETTTTEE----EEEECCCCSSSCCSSCSCSEEEECSSS----SEE
T ss_pred EEecCC--------------CeEEEEcCCCeEEEEECCCCcE----EEEecccccccccccCceEEEEECCCC----CEE
Confidence 999964 7899999999999999987632 22222 234468999999995 789
Q ss_pred EEEecCCeEEEEEeccCCccee-eeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecC
Q 022111 229 ASASQDGTVVIWTCAKEGEQWE-GRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAV 288 (302)
Q Consensus 229 ~s~s~D~~i~iwd~~~~~~~~~-~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~ 288 (302)
++|+.|+.|++||+........ ......|...|.+++|+|||++|++|+.| .|++|+...
T Consensus 314 ~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 314 FAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp EEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred EEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 9999999999999865432111 11124678899999999999999999999 799999754
No 38
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.5e-35 Score=257.40 Aligned_cols=251 Identities=24% Similarity=0.344 Sum_probs=203.4
Q ss_pred ccccccccceeEEEEccC-CCEEEEeeCCCcEEEEeecCCC---ceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCe
Q 022111 5 KIETGHEDTVHDVAMDFY-GKRLATASSDSSIKIIGLSNSA---SQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQ 80 (302)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~-~~~l~s~~~d~~v~lw~~~~~~---~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~ 80 (302)
.++.||++.|++++|+|+ +++|||||.|++|+|||+.... ..+...+.+|...|.+++|+++ +++|++++.|+.
T Consensus 32 ~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~d--g~~l~s~~~d~~ 109 (340)
T 4aow_A 32 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSD--GQFALSGSWDGT 109 (340)
T ss_dssp EEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSE
T ss_pred EEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCC--CCEEEEEccccc
Confidence 357799999999999998 5899999999999999986432 3456778999999999999864 899999999999
Q ss_pred EEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCC
Q 022111 81 VIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPA 160 (302)
Q Consensus 81 i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 160 (302)
|++|+.... ........+...+..+.++|+ +..|++|+.|+.+++||..... ........|...+..++|++.
T Consensus 110 i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~l~s~s~d~~~~~~d~~~~~--~~~~~~~~~~~~v~~~~~~~~ 182 (340)
T 4aow_A 110 LRLWDLTTG---TTTRRFVGHTKDVLSVAFSSD--NRQIVSGSRDKTIKLWNTLGVC--KYTVQDESHSEWVSCVRFSPN 182 (340)
T ss_dssp EEEEETTTT---EEEEEEECCSSCEEEEEECTT--SSCEEEEETTSCEEEECTTSCE--EEEECSSSCSSCEEEEEECSC
T ss_pred ceEEeeccc---ceeeeecCCCCceeEEEEeec--CccceeecCCCeEEEEEeCCCc--eEEEEeccccCcccceEEccC
Confidence 999998665 244455567888999999987 5689999999999999876432 222233478888999999876
Q ss_pred CCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEE
Q 022111 161 MAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240 (302)
Q Consensus 161 ~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iw 240 (302)
. ....+++++.|+.|++||+.++ .+...+.+|.+.|++++|+|++ ++|++|+.|+.|++|
T Consensus 183 ~------------~~~~~~s~~~d~~i~i~d~~~~----~~~~~~~~h~~~v~~~~~s~~~----~~l~s~s~Dg~i~iw 242 (340)
T 4aow_A 183 S------------SNPIIVSCGWDKLVKVWNLANC----KLKTNHIGHTGYLNTVTVSPDG----SLCASGGKDGQAMLW 242 (340)
T ss_dssp S------------SSCEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEECTTS----SEEEEEETTCEEEEE
T ss_pred C------------CCcEEEEEcCCCEEEEEECCCC----ceeeEecCCCCcEEEEEECCCC----CEEEEEeCCCeEEEE
Confidence 4 2357899999999999999876 3456678999999999999985 789999999999999
Q ss_pred EeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCCceEEeeecC
Q 022111 241 TCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAV 288 (302)
Q Consensus 241 d~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d~i~~w~~~~ 288 (302)
|++.... .........|.++.|+|++.+++++.+..|++|+...
T Consensus 243 d~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~ 286 (340)
T 4aow_A 243 DLNEGKH----LYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEG 286 (340)
T ss_dssp ETTTTEE----EEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTT
T ss_pred EeccCce----eeeecCCceEEeeecCCCCceeeccCCCEEEEEECCC
Confidence 9976421 1112345689999999999888777655899999754
No 39
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.6e-36 Score=281.08 Aligned_cols=238 Identities=34% Similarity=0.528 Sum_probs=202.6
Q ss_pred cccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
.+.+|...|.+++|+|++++|++++.|++|++|+.. .+.+..+.+|...|.+++|+++ +++|++++.|++|++||
T Consensus 339 ~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~---~~~~~~~~~~~~~v~~~~~s~d--g~~l~~~~~d~~v~~~~ 413 (577)
T 2ymu_A 339 TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN---GQLLQTLTGHSSSVRGVAFSPD--GQTIASASDDKTVKLWN 413 (577)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT---CCEEEEEECCSSCEEEEEECTT--SSCEEEEETTSEEEEEC
T ss_pred EEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC---CCEEEEecCCCCCeEEEEECCC--CCEEEEEeCCCEEEEEe
Confidence 356899999999999999999999999999999964 3456778899999999999864 88999999999999999
Q ss_pred cCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCc
Q 022111 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 165 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 165 (302)
... .....+.+|...|.+++|+|| +.+|++++.|+.|++|+... . ....+ .+|...|.+++|+|++
T Consensus 414 ~~~----~~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~d~~v~~w~~~~--~-~~~~~-~~~~~~v~~~~~spd~---- 479 (577)
T 2ymu_A 414 RNG----QLLQTLTGHSSSVWGVAFSPD--DQTIASASDDKTVKLWNRNG--Q-LLQTL-TGHSSSVRGVAFSPDG---- 479 (577)
T ss_dssp TTC----CEEEEEECCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTS--C-EEEEE-ECCSSCEEEEEECTTS----
T ss_pred CCC----CEEEEecCCCCCeEEEEECCC--CCEEEEEcCCCEEEEEECCC--C-EEEEE-cCCCCCEEEEEEcCCC----
Confidence 643 356778889999999999998 56999999999999999642 1 22333 3788999999999864
Q ss_pred eeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccC
Q 022111 166 LVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKE 245 (302)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~ 245 (302)
++|++++.|++|+|||.. + .++..+.+|...|++|+|+|++ ++|++++.|+.|++||....
T Consensus 480 ----------~~las~~~d~~i~iw~~~-~----~~~~~~~~h~~~v~~l~~s~dg----~~l~s~~~dg~v~lwd~~~~ 540 (577)
T 2ymu_A 480 ----------QTIASASDDKTVKLWNRN-G----QLLQTLTGHSSSVRGVAFSPDG----QTIASASDDKTVKLWNRNGQ 540 (577)
T ss_dssp ----------CEEEEEETTSEEEEEETT-S----CEEEEEECCSSCEEEEEECTTS----SCEEEEETTSEEEEECTTSC
T ss_pred ----------CEEEEEeCCCEEEEEcCC-C----CEEEEEeCCCCCEEEEEEcCCC----CEEEEEECcCEEEEEeCCCC
Confidence 789999999999999953 3 3556788999999999999996 77999999999999996421
Q ss_pred CcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEee
Q 022111 246 GEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWK 285 (302)
Q Consensus 246 ~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~ 285 (302)
....+.+|..+|++++|+|||++|++++.| .|++||
T Consensus 541 ----~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 541 ----LLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp ----EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ----EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 123456888999999999999999999998 799996
No 40
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=9.5e-36 Score=256.88 Aligned_cols=246 Identities=24% Similarity=0.370 Sum_probs=201.3
Q ss_pred cccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
.+.+|...|.+++|+|++++|++|+.|++|++||+... +.+..+.+|...|.+++|+++ +++|++|+.|++|++||
T Consensus 60 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~i~iwd 135 (312)
T 4ery_A 60 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG--KCLKTLKGHSNYVFCCNFNPQ--SNLIVSGSFDESVRIWD 135 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEECSS--SSEEEEEETTSCEEEEE
T ss_pred hhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCC--cEEEEEcCCCCCEEEEEEcCC--CCEEEEEeCCCcEEEEE
Confidence 45689999999999999999999999999999998653 466788899999999999864 78999999999999999
Q ss_pred cCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCc
Q 022111 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 165 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 165 (302)
+++. .....+..|..+|.+++|+|+ +.++++|+.|+.|++||++.... ...+...+...+..++|+|++
T Consensus 136 ~~~~---~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~---- 204 (312)
T 4ery_A 136 VKTG---KCLKTLPAHSDPVSAVHFNRD--GSLIVSSSYDGLCRIWDTASGQC--LKTLIDDDNPPVSFVKFSPNG---- 204 (312)
T ss_dssp TTTC---CEEEEECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTCCE--EEEECCSSCCCEEEEEECTTS----
T ss_pred CCCC---EEEEEecCCCCcEEEEEEcCC--CCEEEEEeCCCcEEEEECCCCce--eeEEeccCCCceEEEEECCCC----
Confidence 9765 356778889999999999998 66999999999999999875432 223333566778999999864
Q ss_pred eeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeE--EEeeCCCCCCccEEEEEecCCeEEEEEec
Q 022111 166 LVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRS--VAWAPNLGLPKSTIASASQDGTVVIWTCA 243 (302)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~--v~~~p~~~~~~~~l~s~s~D~~i~iwd~~ 243 (302)
.+|++++.|+.|++||++++ .++..+.+|...+.+ ..|++.. +.+|++|+.|+.|++||++
T Consensus 205 ----------~~l~~~~~d~~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~sg~~dg~i~vwd~~ 267 (312)
T 4ery_A 205 ----------KYILAATLDNTLKLWDYSKG----KCLKTYTGHKNEKYCIFANFSVTG---GKWIVSGSEDNLVYIWNLQ 267 (312)
T ss_dssp ----------SEEEEEETTTEEEEEETTTT----EEEEEECSSCCSSSCCCEEEECSS---SCEEEECCTTSCEEEEETT
T ss_pred ----------CEEEEEcCCCeEEEEECCCC----cEEEEEEecCCceEEEEEEEEeCC---CcEEEEECCCCEEEEEECC
Confidence 78999999999999999876 344556677655433 3455432 4789999999999999997
Q ss_pred cCCcceeeeeeccCCCcEEEEEEccCCCEEEEec--CC-ceEEeee
Q 022111 244 KEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVAD--AN-NVTLWKE 286 (302)
Q Consensus 244 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~--~d-~i~~w~~ 286 (302)
... ....+.+|...|.+++|+|++++|++++ .| .|++|+.
T Consensus 268 ~~~---~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 268 TKE---IVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp TCC---EEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred Cch---hhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 642 1234567888999999999999999885 45 7999985
No 41
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=9.3e-36 Score=277.29 Aligned_cols=256 Identities=30% Similarity=0.485 Sum_probs=207.0
Q ss_pred cccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEE
Q 022111 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83 (302)
Q Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~i 83 (302)
+..+.||++.|++++|+|||++||+|+.|++|+|||.. .+.+.++.+|.+.|++++|+|+ +++||+++.|++|++
T Consensus 9 ~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~---~~~~~~l~gh~~~V~~l~fspd--g~~las~~~d~~i~v 83 (577)
T 2ymu_A 9 RNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN---GQLLQTLTGHSSSVWGVAFSPD--GQTIASASDDKTVKL 83 (577)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTT---SCEEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEE
T ss_pred eeEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECC---CCEEEEEeCCCCCEEEEEECCC--CCEEEEEeCCCEEEE
Confidence 44578999999999999999999999999999999963 3567889999999999999874 899999999999999
Q ss_pred EEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCC
Q 022111 84 WKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAP 163 (302)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 163 (302)
||... ..+.++.+|...|.+++|+|+ +.+|++++.|+.+++|+.... ..... ..|...+..+.++|+...
T Consensus 84 Wd~~~----~~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~d~~~~~~~~~~~---~~~~~-~~~~~~v~~~~~~~~~~~ 153 (577)
T 2ymu_A 84 WNRNG----QLLQTLTGHSSSVRGVAFSPD--GQTIASASDDKTVKLWNRNGQ---LLQTL-TGHSSSVWGVAFSPDGQT 153 (577)
T ss_dssp EETTS----CEEEEECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTCC---EEEEE-CCCSSCEEEEEECTTSSC
T ss_pred EECCC----CEEEEEECCCCCEEEEEECCC--CCEEEEEcCCCceeecccccc---eeeec-cCCCCceeeeeeecCCcc
Confidence 99743 367788999999999999998 679999999999999986432 11222 256667777777765421
Q ss_pred ---------------------------CceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEE
Q 022111 164 ---------------------------GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVA 216 (302)
Q Consensus 164 ---------------------------~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~ 216 (302)
..+..+...+++.+|++++.|+.|++||... ..+..+.+|...|.+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~-----~~~~~~~~~~~~v~~~~ 228 (577)
T 2ymu_A 154 IASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-----QLLQTLTGHSSSVRGVA 228 (577)
T ss_dssp EEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS-----CEEEEEECCSSCEEEEE
T ss_pred ceecccccceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeCCC-----cEEEEEecCCCCEEEEE
Confidence 0111222345578899999999999999543 34556788999999999
Q ss_pred eeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeec
Q 022111 217 WAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEA 287 (302)
Q Consensus 217 ~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~ 287 (302)
|+|++ ..|++++.|+.|++||.... ....+..+..+|.+++|+|+|++|++++.| .+++|+..
T Consensus 229 ~s~dg----~~l~~~~~d~~i~~w~~~~~----~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~ 292 (577)
T 2ymu_A 229 FSPDG----QTIASASDDKTVKLWNRNGQ----LLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN 292 (577)
T ss_dssp ECTTS----SCEEEEETTSCEEEECTTSC----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred ECCCC----CEEEEEeCCCEEEEEeCCCC----EEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC
Confidence 99995 67999999999999996432 123456788899999999999999999888 79999953
No 42
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.8e-35 Score=261.40 Aligned_cols=215 Identities=12% Similarity=0.094 Sum_probs=157.6
Q ss_pred cCeEEEEeeCCCCCCEEE--EEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEe
Q 022111 56 GPVWQVAWAHPKFGSILA--SCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA 133 (302)
Q Consensus 56 ~~v~~v~~~~~~~~~~l~--s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~ 133 (302)
..+..++|+|+ |++|| +++.|++|+|||+++. .++..+. |...|.+++|+|| |.++++++.++ +.+|+.
T Consensus 134 ~~~~~v~fSpD--g~~la~as~~~d~~i~iwd~~~~---~~~~~~~-~~~~V~~v~fspd--g~~l~s~s~~~-~~~~~~ 204 (365)
T 4h5i_A 134 DYTKLVYISRE--GTVAAIASSKVPAIMRIIDPSDL---TEKFEIE-TRGEVKDLHFSTD--GKVVAYITGSS-LEVIST 204 (365)
T ss_dssp CCEEEEEECTT--SSCEEEEESCSSCEEEEEETTTT---EEEEEEE-CSSCCCEEEECTT--SSEEEEECSSC-EEEEET
T ss_pred cCEEEEEEcCC--CCEEEEEECCCCCEEEEeECCCC---cEEEEeC-CCCceEEEEEccC--CceEEecccee-EEEEEe
Confidence 34678899874 78765 4557999999999775 3455554 7788999999998 77899988655 555655
Q ss_pred cCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCC----cEEEEEEecCccccccccccccCC
Q 022111 134 TADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN----TVKVWKMYNGIWKMDCFPALQMHS 209 (302)
Q Consensus 134 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~----~v~iwd~~~~~~~~~~~~~~~~h~ 209 (302)
..... ........|...+.+++|+|++ ..+++++.|+ .+++||+............+.+|.
T Consensus 205 ~~~~~-~~~~~~~~~~~~v~~v~fspdg--------------~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 269 (365)
T 4h5i_A 205 VTGSC-IARKTDFDKNWSLSKINFIADD--------------TVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRF 269 (365)
T ss_dssp TTCCE-EEEECCCCTTEEEEEEEEEETT--------------EEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSC
T ss_pred ccCcc-eeeeecCCCCCCEEEEEEcCCC--------------CEEEEEecCCcceeEEeecccccceecceeeeeecCCC
Confidence 43322 2222334678889999999864 7899998887 688899877644333345677899
Q ss_pred CceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecC
Q 022111 210 DWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAV 288 (302)
Q Consensus 210 ~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~ 288 (302)
..|++++|+|++ ++||+|+.|++|+|||+++.. ....++.+|..+|++|+|||||++||+++.| +|+||++..
T Consensus 270 ~~V~~~~~Spdg----~~lasgs~D~~V~iwd~~~~~--~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 270 KGITSMDVDMKG----ELAVLASNDNSIALVKLKDLS--MSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp SCEEEEEECTTS----CEEEEEETTSCEEEEETTTTE--EEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CCeEeEEECCCC----CceEEEcCCCEEEEEECCCCc--EEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 999999999995 789999999999999997642 1223456789999999999999999999999 799999854
Q ss_pred C-----ceEEEeeecCC
Q 022111 289 D-----GEWQQVSVVEP 300 (302)
Q Consensus 289 ~-----~~~~~~~~~~~ 300 (302)
+ ..|++...+||
T Consensus 344 ~~~~~~s~~~~l~kl~~ 360 (365)
T 4h5i_A 344 NYANYTSMKQKISKLEH 360 (365)
T ss_dssp TTTC-------------
T ss_pred CCcCccCccccceeeec
Confidence 2 22666666665
No 43
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.7e-35 Score=278.12 Aligned_cols=251 Identities=21% Similarity=0.314 Sum_probs=193.7
Q ss_pred cccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
.+.+|...|++++|++++++|++|+.|++|+|||+.. ...+..+.+|...|.+++|+++ +++|+||+.|++|++||
T Consensus 425 ~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~--~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~s~D~~i~iwd 500 (694)
T 3dm0_A 425 RLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAA--GVSTRRFVGHTKDVLSVAFSLD--NRQIVSASRDRTIKLWN 500 (694)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEECTT--SSCEEEEETTSCEEEEC
T ss_pred eecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCC--CcceeEEeCCCCCEEEEEEeCC--CCEEEEEeCCCEEEEEE
Confidence 4668999999999999999999999999999999865 4566788899999999999864 78999999999999999
Q ss_pred cCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCc
Q 022111 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 165 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 165 (302)
..............+|...|.+++|+|+.....+++|+.|++|++||++... ....+ .+|...|++++|+|++
T Consensus 501 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~--~~~~~-~~h~~~v~~v~~spdg---- 573 (694)
T 3dm0_A 501 TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK--LRSTL-AGHTGYVSTVAVSPDG---- 573 (694)
T ss_dssp TTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC--EEEEE-CCCSSCEEEEEECTTS----
T ss_pred CCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc--EEEEE-cCCCCCEEEEEEeCCC----
Confidence 7543211111123468999999999998544589999999999999987542 22233 3799999999999864
Q ss_pred eeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccC
Q 022111 166 LVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKE 245 (302)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~ 245 (302)
.+|++|+.|++|+|||+.++. ++..+. +...|.+++|+|++ ..|+ ++.|+.|+|||++..
T Consensus 574 ----------~~l~sg~~Dg~i~iwd~~~~~----~~~~~~-~~~~v~~~~~sp~~----~~l~-~~~~~~i~iwd~~~~ 633 (694)
T 3dm0_A 574 ----------SLCASGGKDGVVLLWDLAEGK----KLYSLE-ANSVIHALCFSPNR----YWLC-AATEHGIKIWDLESK 633 (694)
T ss_dssp ----------SEEEEEETTSBCEEEETTTTE----EEECCB-CSSCEEEEEECSSS----SEEE-EEETTEEEEEETTTT
T ss_pred ----------CEEEEEeCCCeEEEEECCCCc----eEEEec-CCCcEEEEEEcCCC----cEEE-EEcCCCEEEEECCCC
Confidence 789999999999999998763 233333 45679999999984 4454 456777999999764
Q ss_pred Ccceeeee----------------eccCCCcEEEEEEccCCCEEEEecCC-ceEEeeec
Q 022111 246 GEQWEGRV----------------LKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEA 287 (302)
Q Consensus 246 ~~~~~~~~----------------~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~ 287 (302)
........ .......+.+++|||||++|++|+.| .|++|++.
T Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 634 SIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 21100000 00011237899999999999999999 79999974
No 44
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1e-33 Score=245.15 Aligned_cols=240 Identities=17% Similarity=0.236 Sum_probs=202.6
Q ss_pred ccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCC
Q 022111 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGN 88 (302)
Q Consensus 9 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~ 88 (302)
+|...|.+++|+|++++|++++.|+.|++|++..........+.+|...|.+++|+++ +++|++++.|+.|++||+++
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~v~~~d~~~ 172 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLHN 172 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTT--SSEEEEEETTSCEEEEETTT
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCC--CCEEEEEeCCCcEEEEeCCC
Confidence 7899999999999999999999999999999976554456678889999999999864 78999999999999999976
Q ss_pred CCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceee
Q 022111 89 QNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVG 168 (302)
Q Consensus 89 ~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 168 (302)
. .....+..|...|.+++|+|+ +.+|++++.|+.|++||++.... ...+ .+...+.+++|+|++
T Consensus 173 ~---~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~--~~~~--~~~~~v~~~~~s~~~------- 236 (337)
T 1gxr_A 173 Q---TLVRQFQGHTDGASCIDISND--GTKLWTGGLDNTVRSWDLREGRQ--LQQH--DFTSQIFSLGYCPTG------- 236 (337)
T ss_dssp T---EEEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTEE--EEEE--ECSSCEEEEEECTTS-------
T ss_pred C---ceeeeeecccCceEEEEECCC--CCEEEEEecCCcEEEEECCCCce--Eeee--cCCCceEEEEECCCC-------
Confidence 5 466778889999999999998 66899999999999999875422 2222 467789999999864
Q ss_pred cccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcc
Q 022111 169 LGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQ 248 (302)
Q Consensus 169 ~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~ 248 (302)
..|++++.|+.|++||+.++. ...+..|...|.+++|+|++ +.|++++.|+.|++||+.....
T Consensus 237 -------~~l~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~~~~~~~~~~- 299 (337)
T 1gxr_A 237 -------EWLAVGMESSNVEVLHVNKPD-----KYQLHLHESCVLSLKFAYCG----KWFVSTGKDNLLNAWRTPYGAS- 299 (337)
T ss_dssp -------SEEEEEETTSCEEEEETTSSC-----EEEECCCSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTCCE-
T ss_pred -------CEEEEEcCCCcEEEEECCCCC-----eEEEcCCccceeEEEECCCC----CEEEEecCCCcEEEEECCCCeE-
Confidence 789999999999999998753 23467899999999999985 7899999999999999876432
Q ss_pred eeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeee
Q 022111 249 WEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKE 286 (302)
Q Consensus 249 ~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~ 286 (302)
.....+...+.+++|+|++++|++++.| .|++|+.
T Consensus 300 ---~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 300 ---IFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp ---EEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred ---EEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 1224567889999999999999999988 6999985
No 45
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.5e-34 Score=253.86 Aligned_cols=262 Identities=12% Similarity=0.114 Sum_probs=196.7
Q ss_pred cccccccceeEEEEccCC-CEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEE
Q 022111 6 IETGHEDTVHDVAMDFYG-KRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIW 84 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iw 84 (302)
.+.+|...|++++|+|++ ++|++|+.|++|++|++..........+.+|...|.+++|++. ++++|++++.|++|++|
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~s~~~d~~i~iw 146 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQF-NTNQLFVSSIRGATTLR 146 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETT-EEEEEEEEETTTEEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCC-CCCEEEEEeCCCEEEEE
Confidence 456899999999999999 9999999999999999976554444444579999999999863 36899999999999999
Q ss_pred EcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCC
Q 022111 85 KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPG 164 (302)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 164 (302)
|++.. ..........|...|.+++|+|+ +.+|++|+.|+.|++||++ .. ....+. .|...|.+++|+|++
T Consensus 147 d~~~~-~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~d~~-~~--~~~~~~-~h~~~v~~~~~~~~~--- 216 (383)
T 3ei3_B 147 DFSGS-VIQVFAKTDSWDYWYCCVDVSVS--RQMLATGDSTGRLLLLGLD-GH--EIFKEK-LHKAKVTHAEFNPRC--- 216 (383)
T ss_dssp ETTSC-EEEEEECCCCSSCCEEEEEEETT--TTEEEEEETTSEEEEEETT-SC--EEEEEE-CSSSCEEEEEECSSC---
T ss_pred ECCCC-ceEEEeccCCCCCCeEEEEECCC--CCEEEEECCCCCEEEEECC-CC--EEEEec-cCCCcEEEEEECCCC---
Confidence 99753 22222222345588999999998 6699999999999999984 21 223343 788999999999864
Q ss_pred ceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeC-CCCCCccEEEEEecCCeEEEEEec
Q 022111 165 ALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAP-NLGLPKSTIASASQDGTVVIWTCA 243 (302)
Q Consensus 165 ~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~~~~l~s~s~D~~i~iwd~~ 243 (302)
..+|++|+.|+.|++||+++......++..+ +|...|.+++|+| ++ ..|++++.|+.|++||++
T Consensus 217 ----------~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~----~~l~~~~~d~~i~iwd~~ 281 (383)
T 3ei3_B 217 ----------DWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDS----TKLLTTDQRNEIRVYSSY 281 (383)
T ss_dssp ----------TTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTS----CEEEEEESSSEEEEEETT
T ss_pred ----------CCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCC----CEEEEEcCCCcEEEEECC
Confidence 1289999999999999998743222333334 6999999999999 74 789999999999999997
Q ss_pred cCCcceeeeee----ccC----------CCcEEEEEEccCCCEEEEecCC-ceEEeeecCCceEEEe
Q 022111 244 KEGEQWEGRVL----KDF----------KTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQV 295 (302)
Q Consensus 244 ~~~~~~~~~~~----~~~----------~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~~~~~ 295 (302)
........... ..+ ...+..++|+|+|++ +++.| .|++|+.........+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l 346 (383)
T 3ei3_B 282 DWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQL 346 (383)
T ss_dssp BTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEE
T ss_pred CCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeee
Confidence 64321110000 011 134555777777777 66667 7999998655544443
No 46
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-34 Score=248.67 Aligned_cols=252 Identities=19% Similarity=0.281 Sum_probs=202.0
Q ss_pred ccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEE
Q 022111 5 KIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIW 84 (302)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iw 84 (302)
..+.+|++.|++++|+|++++|++++.|+.|++|++.. .+.+..+.+|...|.+++|+++ +++|++++.|++|++|
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~--~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~iw 101 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLN--GERLGTLDGHTGTIWSIDVDCF--TKYCVTGSADYSIKLW 101 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTT--CCEEEEECCCSSCEEEEEECTT--SSEEEEEETTTEEEEE
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCC--chhhhhhhhcCCcEEEEEEcCC--CCEEEEEeCCCeEEEE
Confidence 34679999999999999999999999999999999865 3567788999999999999864 7899999999999999
Q ss_pred EcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecC-----CcEEEEEecCCCCee---------eeeecccCCC
Q 022111 85 KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD-----GNISVFTATADGGWD---------TTRIDQAHPV 150 (302)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d-----~~v~~~~~~~~~~~~---------~~~~~~~h~~ 150 (302)
|+.+.. ....+. +...|.+++|+|+ +..+++++.+ +.|++|++....... ...+ ..|..
T Consensus 102 d~~~~~---~~~~~~-~~~~v~~~~~~~~--~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~ 174 (369)
T 3zwl_B 102 DVSNGQ---CVATWK-SPVPVKRVEFSPC--GNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKI-ITHEG 174 (369)
T ss_dssp ETTTCC---EEEEEE-CSSCEEEEEECTT--SSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE-ECCTT
T ss_pred ECCCCc---EEEEee-cCCCeEEEEEccC--CCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeec-cCCcC
Confidence 997763 445555 8889999999998 6689999998 999999987543211 0111 13433
Q ss_pred --CeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEE
Q 022111 151 --GVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTI 228 (302)
Q Consensus 151 --~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l 228 (302)
.+.+++|+|+ +..|++++.|+.|++||+++.. .....+..|...|.+++|+|++ ..|
T Consensus 175 ~~~~~~~~~~~~--------------~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~----~~l 233 (369)
T 3zwl_B 175 LDAATVAGWSTK--------------GKYIIAGHKDGKISKYDVSNNY---EYVDSIDLHEKSISDMQFSPDL----TYF 233 (369)
T ss_dssp CCCEEEEEECGG--------------GCEEEEEETTSEEEEEETTTTT---EEEEEEECCSSCEEEEEECTTS----SEE
T ss_pred ccceeEEEEcCC--------------CCEEEEEcCCCEEEEEECCCCc---EeEEEEecCCCceeEEEECCCC----CEE
Confidence 7888999885 4789999999999999998632 3445677899999999999985 789
Q ss_pred EEEecCCeEEEEEeccCCccee----------------------------------------------------eeeecc
Q 022111 229 ASASQDGTVVIWTCAKEGEQWE----------------------------------------------------GRVLKD 256 (302)
Q Consensus 229 ~s~s~D~~i~iwd~~~~~~~~~----------------------------------------------------~~~~~~ 256 (302)
++++.|+.|++||++....... ...+..
T Consensus 234 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 313 (369)
T 3zwl_B 234 ITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQG 313 (369)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEEC
T ss_pred EEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheec
Confidence 9999999999999875321100 001124
Q ss_pred CCCcEEEEEEccCCCEEEEecCC-ceEEeeecC
Q 022111 257 FKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAV 288 (302)
Q Consensus 257 ~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~ 288 (302)
+...|.+++|+|+|++|++++.| .|++|+...
T Consensus 314 ~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 314 HFGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 56789999999999999999888 799999753
No 47
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-35 Score=272.66 Aligned_cols=249 Identities=13% Similarity=0.132 Sum_probs=191.4
Q ss_pred ccccccceeEEEEccC------CCEEEEeeCCCcEEEEeecCCCc---------eEEEEecCcccCeEEEEeeCCCCCCE
Q 022111 7 ETGHEDTVHDVAMDFY------GKRLATASSDSSIKIIGLSNSAS---------QHLATLKGHRGPVWQVAWAHPKFGSI 71 (302)
Q Consensus 7 ~~~h~~~v~~~~~s~~------~~~l~s~~~d~~v~lw~~~~~~~---------~~~~~~~~h~~~v~~v~~~~~~~~~~ 71 (302)
+.+|.+.|.+++|+|+ +.+||+++.|++|+||++..... .+...+.+|...|++++|+++ .+
T Consensus 203 l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~---~~ 279 (524)
T 2j04_B 203 IVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP---TT 279 (524)
T ss_dssp EEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS---SE
T ss_pred EEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC---Ce
Confidence 4567889999999996 57999999999999999864321 123467899999999999753 58
Q ss_pred EEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEE--EecCCCCC-cEEEEEecCCcEEEEEecCCCCeeeeeecccC
Q 022111 72 LASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSI--AWAPHELG-LSLACGSSDGNISVFTATADGGWDTTRIDQAH 148 (302)
Q Consensus 72 l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l--~~~pd~~~-~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h 148 (302)
|++|+.|++|++||+++.. .+...+.+|...|.+| +|+|+ + .+||+|+.|++|+|||++...... .+. +|
T Consensus 280 lasgs~DgtV~lWD~~~~~--~~~~~~~~H~~~V~sv~~~~s~~--g~~~laS~S~D~tvklWD~~~~~~~~--~~~-~~ 352 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPE--VPSFYDQVHDSYILSVSTAYSDF--EDTVVSTVAVDGYFYIFNPKDIATTK--TTV-SR 352 (524)
T ss_dssp EEEEETTSEEEEEETTBCS--SCSEEEECSSSCEEEEEEECCTT--SCCEEEEEETTSEEEEECGGGHHHHC--EEE-EE
T ss_pred EEEEeCCCEEEEEECCCCC--CceEEeecccccEEEEEEEcCCC--CCeEEEEeccCCeEEEEECCCCCccc--ccc-cc
Confidence 9999999999999997642 2345677899999999 56776 4 689999999999999987532211 111 33
Q ss_pred C--CCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCcc
Q 022111 149 P--VGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKS 226 (302)
Q Consensus 149 ~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~ 226 (302)
. ..|.+++|+|++ ..|++++.|++|++||++++ .+...+.+|.+.|++|+|+|++ .
T Consensus 353 ~~~~~v~~v~fsp~~--------------~~l~s~~~d~tv~lwd~~~~----~~~~~l~gH~~~V~sva~Sp~g----~ 410 (524)
T 2j04_B 353 FRGSNLVPVVYCPQI--------------YSYIYSDGASSLRAVPSRAA----FAVHPLVSRETTITAIGVSRLH----P 410 (524)
T ss_dssp CSCCSCCCEEEETTT--------------TEEEEECSSSEEEEEETTCT----TCCEEEEECSSCEEEEECCSSC----C
T ss_pred cccCcccceEeCCCc--------------CeEEEeCCCCcEEEEECccc----ccceeeecCCCceEEEEeCCCC----C
Confidence 3 247889999864 67999999999999999875 3455678999999999999996 6
Q ss_pred EEEEEecCCeEEEEEeccCC-------c-------cee------------------------e---eeeccCCCcEEEEE
Q 022111 227 TIASASQDGTVVIWTCAKEG-------E-------QWE------------------------G---RVLKDFKTPVWSVS 265 (302)
Q Consensus 227 ~l~s~s~D~~i~iwd~~~~~-------~-------~~~------------------------~---~~~~~~~~~v~~~~ 265 (302)
.|++|+.|++|++||+.... . .+. . ..+.++..+|++|+
T Consensus 411 ~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Va 490 (524)
T 2j04_B 411 MVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTK 490 (524)
T ss_dssp BCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEE
T ss_pred eEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEE
Confidence 79999999999999863210 0 000 0 01124556899999
Q ss_pred EccCCC---EEEEecCC-ceEEeeec
Q 022111 266 WSLTGN---LLAVADAN-NVTLWKEA 287 (302)
Q Consensus 266 ~spdg~---~la~~~~d-~i~~w~~~ 287 (302)
|||++. .||+|+.+ .|+||+..
T Consensus 491 fsp~~~~~~~lAsg~~~g~vrlw~l~ 516 (524)
T 2j04_B 491 WNETSAGGKCYAFSNSAGLLTLEYLS 516 (524)
T ss_dssp ECCSTTTTTEEEEECTTSEEEEEECS
T ss_pred CCCCCCccHHHHhhccCceEEEEEcc
Confidence 999964 99999887 69999964
No 48
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=7e-34 Score=254.47 Aligned_cols=261 Identities=16% Similarity=0.180 Sum_probs=201.7
Q ss_pred cceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCc
Q 022111 12 DTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQND 91 (302)
Q Consensus 12 ~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~ 91 (302)
..+....|++++++|++|+.|+.|++|++.. .+....+.+|...|++++|+++ +++|++++.|++|++||+++..
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~d~~i~iwd~~~~~- 172 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNF--NLQREIDQAHVSEITKLKFFPS--GEALISSSQDMQLKIWSVKDGS- 172 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTS--CEEEEETTSSSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTCC-
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCC--cceeeecccccCccEEEEECCC--CCEEEEEeCCCeEEEEeCCCCc-
Confidence 3444557899999999999999999999864 3456667899999999999864 7899999999999999997653
Q ss_pred eeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCC-------C
Q 022111 92 WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAP-------G 164 (302)
Q Consensus 92 ~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-------~ 164 (302)
....+.+|...|.+++|+|+ +.+|++++.|+.|++||++.............|...+.++.|.|.... .
T Consensus 173 --~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 248 (420)
T 3vl1_A 173 --NPRTLIGHRATVTDIAIIDR--GRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTS 248 (420)
T ss_dssp --CCEEEECCSSCEEEEEEETT--TTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCC
T ss_pred --CceEEcCCCCcEEEEEEcCC--CCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccC
Confidence 45677889999999999998 668999999999999998754332222222246677888888765322 2
Q ss_pred ceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEecc
Q 022111 165 ALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAK 244 (302)
Q Consensus 165 ~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~ 244 (302)
.+..+...+++.+|++++.|+.|++||++++... .....+|...|.+++|+|++ ..+|++|+.|+.|++||++.
T Consensus 249 ~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~~v~~~~~~~~~---~~~l~~g~~dg~i~vwd~~~ 322 (420)
T 3vl1_A 249 KKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQT---IQLPSKFTCSCNSLTVDGNN---ANYIYAGYENGMLAQWDLRS 322 (420)
T ss_dssp CCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEE---EEECCTTSSCEEEEEECSSC---TTEEEEEETTSEEEEEETTC
T ss_pred cccceEEcCCCCEEEEEcCCCeEEEEECCCCcee---EEcccccCCCceeEEEeCCC---CCEEEEEeCCCeEEEEEcCC
Confidence 2333445567889999999999999999876321 12235688999999999996 23899999999999999986
Q ss_pred CCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCC
Q 022111 245 EGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVD 289 (302)
Q Consensus 245 ~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~ 289 (302)
.... ...+...+..+|.++.| |++++|++++.| .|++|+....
T Consensus 323 ~~~~-~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 323 PECP-VGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp TTSC-SEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCT
T ss_pred CcCc-hhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCC
Confidence 4321 12232336677888855 578899999988 7999998653
No 49
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=9.5e-34 Score=249.09 Aligned_cols=256 Identities=18% Similarity=0.162 Sum_probs=203.1
Q ss_pred ccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEE
Q 022111 5 KIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIW 84 (302)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iw 84 (302)
..+.+|...|++++|+|++++|++++.|++|++|++..........+..|...|.+++|+++ +++|++++.|+.+++|
T Consensus 46 ~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~i~ 123 (372)
T 1k8k_C 46 HELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPN--EKKFAVGSGSRVISIC 123 (372)
T ss_dssp EEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTT--SSEEEEEETTSSEEEE
T ss_pred eeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCC--CCEEEEEeCCCEEEEE
Confidence 34568999999999999999999999999999999976543444556789999999999864 7899999999999999
Q ss_pred EcCCCCceeEEEE-ecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCC----------------CCeeeeeeccc
Q 022111 85 KEGNQNDWTQAHT-FNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATAD----------------GGWDTTRIDQA 147 (302)
Q Consensus 85 d~~~~~~~~~~~~-~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~----------------~~~~~~~~~~~ 147 (302)
|++....+..... ...|...|.+++|+|+ +.+|++++.|+.|++||+... .......+. .
T Consensus 124 d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 200 (372)
T 1k8k_C 124 YFEQENDWWVCKHIKKPIRSTVLSLDWHPN--SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-S 200 (372)
T ss_dssp EEETTTTEEEEEEECTTCCSCEEEEEECTT--SSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-C
T ss_pred EecCCCcceeeeeeecccCCCeeEEEEcCC--CCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecC-C
Confidence 9977654333333 3668999999999998 669999999999999996411 111222332 6
Q ss_pred CCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccE
Q 022111 148 HPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKST 227 (302)
Q Consensus 148 h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~ 227 (302)
|...+.+++|+|++ .+|++++.|+.|++||++++ .++..+..|...|.+++|+|++ .+
T Consensus 201 ~~~~v~~~~~~~~~--------------~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~v~~~~~~~~~----~~ 258 (372)
T 1k8k_C 201 SCGWVHGVCFSANG--------------SRVAWVSHDSTVCLADADKK----MAVATLASETLPLLAVTFITES----SL 258 (372)
T ss_dssp CSSCEEEEEECSSS--------------SEEEEEETTTEEEEEEGGGT----TEEEEEECSSCCEEEEEEEETT----EE
T ss_pred CCCeEEEEEECCCC--------------CEEEEEeCCCEEEEEECCCC----ceeEEEccCCCCeEEEEEecCC----CE
Confidence 88889999999863 78999999999999999876 3456677899999999999985 66
Q ss_pred EEEEecCCeEEEEEeccCCccee--------------------------------------eeeeccCCCcEEEEEEc-c
Q 022111 228 IASASQDGTVVIWTCAKEGEQWE--------------------------------------GRVLKDFKTPVWSVSWS-L 268 (302)
Q Consensus 228 l~s~s~D~~i~iwd~~~~~~~~~--------------------------------------~~~~~~~~~~v~~~~~s-p 268 (302)
|++| .|+.|++|+++.....|. ..+..+|..+|.+++|+ +
T Consensus 259 l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 337 (372)
T 1k8k_C 259 VAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSG 337 (372)
T ss_dssp EEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEES
T ss_pred EEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecC
Confidence 7666 999999999986111100 11224778899999966 6
Q ss_pred CC---CEEEEecCC-ceEEeeecC
Q 022111 269 TG---NLLAVADAN-NVTLWKEAV 288 (302)
Q Consensus 269 dg---~~la~~~~d-~i~~w~~~~ 288 (302)
+| ++|++++.| .|++|+...
T Consensus 338 ~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 338 GKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp TTTSCSEEEEEETTSEEEEEEHHH
T ss_pred CCcceeeEEEecCCCceEEEEecC
Confidence 77 999999999 799999753
No 50
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=5.2e-35 Score=256.19 Aligned_cols=252 Identities=16% Similarity=0.238 Sum_probs=199.1
Q ss_pred cccceeEEEEccC----CCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 10 HEDTVHDVAMDFY----GKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 10 h~~~v~~~~~s~~----~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
|...|++++|+++ +++|++|+.|++|++||+.. .+.+..+.+|...|.+++|++. ++++|++++.|++|++||
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~--~~~~~~~~~~~~~i~~~~~~~~-~~~~l~s~~~dg~i~iwd 144 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT--MQCIKHYVGHGNAINELKFHPR-DPNLLLSVSKDHALRLWN 144 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTT--CCEEEEEESCCSCEEEEEECSS-CTTEEEEEETTSCEEEEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchh--ceEeeeecCCCCcEEEEEECCC-CCCEEEEEeCCCeEEEEE
Confidence 6688999999999 67999999999999999865 3456778899999999999862 478999999999999999
Q ss_pred cCCCCceeEEEEe---cCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCee----------------------
Q 022111 86 EGNQNDWTQAHTF---NDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWD---------------------- 140 (302)
Q Consensus 86 ~~~~~~~~~~~~~---~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~---------------------- 140 (302)
+++.. ....+ ..|...|.+++|+|+ +.+|++++.|+.|++||++......
T Consensus 145 ~~~~~---~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (366)
T 3k26_A 145 IQTDT---LVAIFGGVEGHRDEVLSADYDLL--GEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKI 219 (366)
T ss_dssp TTTTE---EEEEECSTTSCSSCEEEEEECTT--SSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEE
T ss_pred eecCe---EEEEecccccccCceeEEEECCC--CCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceee
Confidence 97653 44555 679999999999997 6699999999999999986421100
Q ss_pred ---eeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccc----------ccccccccc
Q 022111 141 ---TTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWK----------MDCFPALQM 207 (302)
Q Consensus 141 ---~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~----------~~~~~~~~~ 207 (302)
.......|...|.++.|+. .+|++++.|+.|++||+.+.... ...+..+.+
T Consensus 220 ~~~~~~~~~~~~~~v~~~~~~~----------------~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (366)
T 3k26_A 220 HFPDFSTRDIHRNYVDCVRWLG----------------DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDY 283 (366)
T ss_dssp CCCSEEECSSCSSCCCEEEEET----------------TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEEC
T ss_pred ccCccccccCCcceEEEEEEcC----------------CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccc
Confidence 0001113777888888862 58999999999999999765321 123456678
Q ss_pred CCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcce-eeeeeccC--CCcEEEEEEccCCCEEEEecCC-ceEE
Q 022111 208 HSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQW-EGRVLKDF--KTPVWSVSWSLTGNLLAVADAN-NVTL 283 (302)
Q Consensus 208 h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~-~~~~~~~~--~~~v~~~~~spdg~~la~~~~d-~i~~ 283 (302)
|...|.+++|+|+. ++.+|++|+.|+.|++||++...... ....+..+ ..+|.+++|+|+|++|++++.| .|++
T Consensus 284 ~~~~v~~~~~s~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~i 361 (366)
T 3k26_A 284 SQCDIWYMRFSMDF--WQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWR 361 (366)
T ss_dssp SSCCSSCCCCEECT--TSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred cCCcEEEEEEcCCC--CCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEE
Confidence 99999999999982 13789999999999999998643211 11223444 6889999999999999999998 7999
Q ss_pred eeec
Q 022111 284 WKEA 287 (302)
Q Consensus 284 w~~~ 287 (302)
|+..
T Consensus 362 wd~~ 365 (366)
T 3k26_A 362 WDRL 365 (366)
T ss_dssp EEC-
T ss_pred EEec
Confidence 9964
No 51
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-34 Score=259.00 Aligned_cols=254 Identities=17% Similarity=0.279 Sum_probs=204.5
Q ss_pred cccccceeEEEEccCCCEEEEeeCCCcEEEEeecCC--CceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNS--ASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 8 ~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~--~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
..|...|++++|+|++++|++++.|+.|++|++... ..+.+..+.+|...|++++|+++ .+++|++++.|++|++||
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~s~~~dg~v~iwd 142 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAK-QDNVLASGGNNGEIFIWD 142 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSS-STTBEEEECSSSCEEBCB
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCC-CCCEEEEEcCCCeEEEEE
Confidence 368899999999999999999999999999998651 12366788899999999999864 378999999999999999
Q ss_pred cCCCC------ceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecc-----cCCCCeEE
Q 022111 86 EGNQN------DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQ-----AHPVGVTS 154 (302)
Q Consensus 86 ~~~~~------~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~-----~h~~~v~~ 154 (302)
++... .......+..|...|.+++|+|+. +.+|++++.|+.|++||+..... ...+.. +|...+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~~~~~v~~ 219 (416)
T 2pm9_A 143 MNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSL-AHVFASAGSSNFASIWDLKAKKE--VIHLSYTSPNSGIKQQLSV 219 (416)
T ss_dssp TTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSC-TTEEEEESSSSCEEEEETTTTEE--EEEECCCCCSSCCCCCEEE
T ss_pred CCCCccccccccccccccccCCCCCeeEEEeCCCC-CcEEEEEcCCCCEEEEECCCCCc--ceEEeccccccccCCceEE
Confidence 97654 212223346799999999999973 45899999999999999875422 222221 12678999
Q ss_pred EEeCCCCCCCceeecccCCCceeEEEeeCCC---cEEEEEEecCccccccccccc-cCCCceeEEEeeC-CCCCCccEEE
Q 022111 155 VSWAPAMAPGALVGLGLLDPVQKLASCGCDN---TVKVWKMYNGIWKMDCFPALQ-MHSDWVRSVAWAP-NLGLPKSTIA 229 (302)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~---~v~iwd~~~~~~~~~~~~~~~-~h~~~v~~v~~~p-~~~~~~~~l~ 229 (302)
++|+|++ ..+|++++.|+ .|++||++++. .....+. +|...|.+++|+| + +.+|+
T Consensus 220 ~~~~~~~-------------~~~l~~~~~d~~~~~i~~~d~~~~~---~~~~~~~~~~~~~v~~~~~s~~~----~~~l~ 279 (416)
T 2pm9_A 220 VEWHPKN-------------STRVATATGSDNDPSILIWDLRNAN---TPLQTLNQGHQKGILSLDWCHQD----EHLLL 279 (416)
T ss_dssp EEECSSC-------------TTEEEEEECCSSSCCCCEEETTSTT---SCSBCCCSCCSSCEEEEEECSSC----SSCEE
T ss_pred EEECCCC-------------CCEEEEEECCCCCceEEEEeCCCCC---CCcEEeecCccCceeEEEeCCCC----CCeEE
Confidence 9999864 25899999998 99999998753 2345666 8999999999999 5 47899
Q ss_pred EEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCC-CEEEEecCC-ceEEeeecC
Q 022111 230 SASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTG-NLLAVADAN-NVTLWKEAV 288 (302)
Q Consensus 230 s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg-~~la~~~~d-~i~~w~~~~ 288 (302)
+++.|+.|++||++.... ...+..+...|.+++|+|++ ++|++++.| .|++|+...
T Consensus 280 s~~~dg~v~~wd~~~~~~---~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 280 SSGRDNTVLLWNPESAEQ---LSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp EEESSSEEEEECSSSCCE---EEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCC
T ss_pred EEeCCCCEEEeeCCCCcc---ceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccC
Confidence 999999999999876432 23345678889999999999 899999888 799999754
No 52
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.6e-34 Score=260.71 Aligned_cols=258 Identities=19% Similarity=0.338 Sum_probs=205.8
Q ss_pred ccccccceeEEEEccC-CCEEEEeeCCCcEEEEeecC--------CCceEEEEecCcccCeEEEEeeCCCCCC-EEEEEe
Q 022111 7 ETGHEDTVHDVAMDFY-GKRLATASSDSSIKIIGLSN--------SASQHLATLKGHRGPVWQVAWAHPKFGS-ILASCS 76 (302)
Q Consensus 7 ~~~h~~~v~~~~~s~~-~~~l~s~~~d~~v~lw~~~~--------~~~~~~~~~~~h~~~v~~v~~~~~~~~~-~l~s~s 76 (302)
..+|.+.|++++|+|+ +++||+++.||.|++|++.. .....+..+.+|...|++++|++. +. +|++|+
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~~ 201 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPN--LNGYLLSAS 201 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTT--STTEEEEEC
T ss_pred EEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCC--CCCeEEEEe
Confidence 3479999999999997 68999999999999999864 123456778899999999999864 45 999999
Q ss_pred CCCeEEEEEcCCCCc----eeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCe-eeeeecccCCCC
Q 022111 77 YDGQVIIWKEGNQND----WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGW-DTTRIDQAHPVG 151 (302)
Q Consensus 77 ~D~~i~iwd~~~~~~----~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~-~~~~~~~~h~~~ 151 (302)
.|++|++||+..... ......+..|...|.+++|+|+. +.++++++.|+.|++||++..... ....+ ..|...
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~ 279 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLH-ESLFGSVADDQKLMIWDTRNNNTSKPSHTV-DAHTAE 279 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSC-TTEEEEEETTSEEEEEETTCSCSSSCSEEE-ECCSSC
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCC-CCEEEEEeCCCeEEEEECCCCCCCcceeEe-ecCCCC
Confidence 999999999976321 12245677899999999999953 568999999999999999854311 12233 378889
Q ss_pred eEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEE
Q 022111 152 VTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASA 231 (302)
Q Consensus 152 v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~ 231 (302)
|++++|+|.+ ..+|++|+.|+.|++||++... ..+..+.+|...|.+++|+|++ ...|+++
T Consensus 280 v~~i~~~p~~-------------~~~l~tg~~dg~v~vwd~~~~~---~~~~~~~~h~~~v~~i~~sp~~---~~~l~s~ 340 (430)
T 2xyi_A 280 VNCLSFNPYS-------------EFILATGSADKTVALWDLRNLK---LKLHSFESHKDEIFQVQWSPHN---ETILASS 340 (430)
T ss_dssp EEEEEECSSC-------------TTEEEEEETTSEEEEEETTCTT---SCSEEEECCSSCEEEEEECSSC---TTEEEEE
T ss_pred eEEEEeCCCC-------------CCEEEEEeCCCeEEEEeCCCCC---CCeEEeecCCCCEEEEEECCCC---CCEEEEE
Confidence 9999999964 2478999999999999998642 3455677899999999999986 3579999
Q ss_pred ecCCeEEEEEeccCCcc-----------eeeeeeccCCCcEEEEEEccCCC-EEEEecCC-ceEEeeec
Q 022111 232 SQDGTVVIWTCAKEGEQ-----------WEGRVLKDFKTPVWSVSWSLTGN-LLAVADAN-NVTLWKEA 287 (302)
Q Consensus 232 s~D~~i~iwd~~~~~~~-----------~~~~~~~~~~~~v~~~~~spdg~-~la~~~~d-~i~~w~~~ 287 (302)
+.|+.|+|||+...... .......+|...|.+++|+|++. +|++++.| .|++|+..
T Consensus 341 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 341 GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp ETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred eCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 99999999999863210 11123356778899999999998 88888887 69999974
No 53
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-34 Score=255.02 Aligned_cols=258 Identities=16% Similarity=0.187 Sum_probs=191.1
Q ss_pred ccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCC-ceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEE
Q 022111 5 KIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSA-SQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83 (302)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~-~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~i 83 (302)
..+.+|...|++++|+|++++|++++.|++|++||+.... ......+.+|...|.+++|+++ +++|++++.|++|++
T Consensus 49 ~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i 126 (377)
T 3dwl_C 49 RTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPN--EDKFAVGSGARVISV 126 (377)
T ss_dssp CCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTT--SSCCEEEESSSCEEE
T ss_pred EEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCC--CCEEEEEecCCeEEE
Confidence 4567899999999999999999999999999999997543 2345677889999999999864 789999999999999
Q ss_pred EEcCCCCceeEEEEecC-CCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCC--------------C-eeeeeeccc
Q 022111 84 WKEGNQNDWTQAHTFND-HKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADG--------------G-WDTTRIDQA 147 (302)
Q Consensus 84 wd~~~~~~~~~~~~~~~-h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~--------------~-~~~~~~~~~ 147 (302)
||++....+.....+.. |...|.+++|+|+ +.+|++++.|+.|++||+.... . ....... .
T Consensus 127 wd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 203 (377)
T 3dwl_C 127 CYFEQENDWWVSKHLKRPLRSTILSLDWHPN--NVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-P 203 (377)
T ss_dssp CCC-----CCCCEEECSSCCSCEEEEEECTT--SSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-C
T ss_pred EEECCcccceeeeEeecccCCCeEEEEEcCC--CCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-c
Confidence 99977643334567777 9999999999998 6799999999999999985221 0 0111111 6
Q ss_pred CCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccE
Q 022111 148 HPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKST 227 (302)
Q Consensus 148 h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~ 227 (302)
|...|.+++|+|++ .+|++++.|+.|++||+.++......+..+.+|...|.+++|+|++ .+
T Consensus 204 ~~~~v~~~~~sp~~--------------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~----~~ 265 (377)
T 3dwl_C 204 SGGWVHAVGFSPSG--------------NALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANES----AI 265 (377)
T ss_dssp CSSSEEEEEECTTS--------------SCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETT----EE
T ss_pred CCceEEEEEECCCC--------------CEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCC----CE
Confidence 88889999999864 7899999999999999988743222366788999999999999995 78
Q ss_pred EEEEecCCeEEEEEeccCCcc----ee------e---------------------------------------eeeccCC
Q 022111 228 IASASQDGTVVIWTCAKEGEQ----WE------G---------------------------------------RVLKDFK 258 (302)
Q Consensus 228 l~s~s~D~~i~iwd~~~~~~~----~~------~---------------------------------------~~~~~~~ 258 (302)
|++++.|+.+ +|+....... .. . .+...|.
T Consensus 266 l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~ 344 (377)
T 3dwl_C 266 VAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQ 344 (377)
T ss_dssp EEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCS
T ss_pred EEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCcccc
Confidence 8888877776 6655421100 00 0 0001277
Q ss_pred CcEEEEEEccC-CC---EEEEecCC-ceEEeee
Q 022111 259 TPVWSVSWSLT-GN---LLAVADAN-NVTLWKE 286 (302)
Q Consensus 259 ~~v~~~~~spd-g~---~la~~~~d-~i~~w~~ 286 (302)
..|.++++.++ +. +|++++.| .|++|+.
T Consensus 345 ~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 345 NMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp SCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 78999997654 33 68889888 7999984
No 54
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-35 Score=270.36 Aligned_cols=234 Identities=13% Similarity=0.158 Sum_probs=175.4
Q ss_pred EEEEeeCCCcEEEEeecCCCce--EEEEecCcccCeEEEEeeCC----CCCCEEEEEeCCCeEEEEEcCCCCce------
Q 022111 25 RLATASSDSSIKIIGLSNSASQ--HLATLKGHRGPVWQVAWAHP----KFGSILASCSYDGQVIIWKEGNQNDW------ 92 (302)
Q Consensus 25 ~l~s~~~d~~v~lw~~~~~~~~--~~~~~~~h~~~v~~v~~~~~----~~~~~l~s~s~D~~i~iwd~~~~~~~------ 92 (302)
.|++++.|++|+||++...... ....+.+|.+.|++++|+|. .++.+||+++.|++|+|||+......
T Consensus 175 ~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~ 254 (524)
T 2j04_B 175 MFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKM 254 (524)
T ss_dssp -------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEEC
T ss_pred hhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccccee
Confidence 3445668899999999764322 12346678889999999874 13579999999999999999654211
Q ss_pred --eEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEE--EeCCCCCCCceee
Q 022111 93 --TQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSV--SWAPAMAPGALVG 168 (302)
Q Consensus 93 --~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~--~~~~~~~~~~~~~ 168 (302)
.+..++.+|...|.+++|+|+ + .|++|+.|++|++||++.... ....+ .+|...|.++ .|+|++
T Consensus 255 ~~~p~~~l~~h~~~v~sv~~s~~--~-~lasgs~DgtV~lWD~~~~~~-~~~~~-~~H~~~V~sv~~~~s~~g------- 322 (524)
T 2j04_B 255 CEKPSLTLSLADSLITTFDFLSP--T-TVVCGFKNGFVAEFDLTDPEV-PSFYD-QVHDSYILSVSTAYSDFE------- 322 (524)
T ss_dssp CCSCSEEECCTTTCEEEEEESSS--S-EEEEEETTSEEEEEETTBCSS-CSEEE-ECSSSCEEEEEEECCTTS-------
T ss_pred ecCceEEEEcCCCCEEEEEecCC--C-eEEEEeCCCEEEEEECCCCCC-ceEEe-ecccccEEEEEEEcCCCC-------
Confidence 123467889999999999975 3 799999999999999875321 11223 3789999999 455531
Q ss_pred cccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCC--ceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCC
Q 022111 169 LGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSD--WVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEG 246 (302)
Q Consensus 169 ~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~--~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~ 246 (302)
..+||||+.|++|+|||++++ .+...+.+|.. .|.+++|+|++ ..|++++.|++|++||++...
T Consensus 323 ------~~~laS~S~D~tvklWD~~~~----~~~~~~~~~~~~~~v~~v~fsp~~----~~l~s~~~d~tv~lwd~~~~~ 388 (524)
T 2j04_B 323 ------DTVVSTVAVDGYFYIFNPKDI----ATTKTTVSRFRGSNLVPVVYCPQI----YSYIYSDGASSLRAVPSRAAF 388 (524)
T ss_dssp ------CCEEEEEETTSEEEEECGGGH----HHHCEEEEECSCCSCCCEEEETTT----TEEEEECSSSEEEEEETTCTT
T ss_pred ------CeEEEEeccCCeEEEEECCCC----CcccccccccccCcccceEeCCCc----CeEEEeCCCCcEEEEECcccc
Confidence 168999999999999999865 33345556653 58999999985 679999999999999998643
Q ss_pred cceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeec
Q 022111 247 EQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEA 287 (302)
Q Consensus 247 ~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~ 287 (302)
. ...+.+|...|++|+|||+|++|++|+.| .|++|+..
T Consensus 389 ~---~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 389 A---VHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAA 427 (524)
T ss_dssp C---CEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSC
T ss_pred c---ceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEech
Confidence 2 12345788999999999999999999999 79999863
No 55
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.2e-33 Score=246.97 Aligned_cols=258 Identities=15% Similarity=0.185 Sum_probs=197.4
Q ss_pred cccccceeEEEEccC---CCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeC----CCCCCEEEEEeCCCe
Q 022111 8 TGHEDTVHDVAMDFY---GKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH----PKFGSILASCSYDGQ 80 (302)
Q Consensus 8 ~~h~~~v~~~~~s~~---~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~----~~~~~~l~s~s~D~~ 80 (302)
.+|...|++++|+|+ +++|++|+.|+.|++|++.... ..+..+.+|...|.+++|.+ ..++++|++++.|+.
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~ 140 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE-MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGT 140 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS-SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSC
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC-ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCe
Confidence 378999999999998 6999999999999999987543 24667889999999997643 124789999999999
Q ss_pred EEEEEcCCCCceeEEEEecCCCC----CeeEEE----ecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCe
Q 022111 81 VIIWKEGNQNDWTQAHTFNDHKS----SVNSIA----WAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGV 152 (302)
Q Consensus 81 i~iwd~~~~~~~~~~~~~~~h~~----~i~~l~----~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v 152 (302)
|++||++.... +...+..|.+ .|.+++ |+|+ +.++++++.|+.|++||++.... ... ..|...+
T Consensus 141 i~vwd~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~---~~~-~~~~~~v 212 (357)
T 3i2n_A 141 VKVWDPRQKDD--PVANMEPVQGENKRDCWTVAFGNAYNQE--ERVVCAGYDNGDIKLFDLRNMAL---RWE-TNIKNGV 212 (357)
T ss_dssp EEEECTTSCSS--CSEEECCCTTSCCCCEEEEEEECCCC-C--CCEEEEEETTSEEEEEETTTTEE---EEE-EECSSCE
T ss_pred EEEEeCCCCCC--cceeccccCCCCCCceEEEEEEeccCCC--CCEEEEEccCCeEEEEECccCce---eee-cCCCCce
Confidence 99999976541 3445544443 899998 6676 66999999999999999875422 122 3678889
Q ss_pred EEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcccccc-ccccccCCCceeEEEeeCCCCCCccEEEEE
Q 022111 153 TSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDC-FPALQMHSDWVRSVAWAPNLGLPKSTIASA 231 (302)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~-~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~ 231 (302)
.++.|+|... ++..|++++.|+.|++||++++...... ...+.+|...|.+++|+|++ ..+|+++
T Consensus 213 ~~~~~~~~~~-----------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~ 278 (357)
T 3i2n_A 213 CSLEFDRKDI-----------SMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQN---RELFLTA 278 (357)
T ss_dssp EEEEESCSSS-----------SCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTE---EEEEEEE
T ss_pred EEEEcCCCCC-----------CCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCC---CcEEEEE
Confidence 9999998310 1378999999999999999875311110 11234899999999999985 2389999
Q ss_pred ecCCeEEEEEeccCCcc----------------eeeeeeccCCCcEEEEEEccCCCEEE-EecCC-ceEEeeecC
Q 022111 232 SQDGTVVIWTCAKEGEQ----------------WEGRVLKDFKTPVWSVSWSLTGNLLA-VADAN-NVTLWKEAV 288 (302)
Q Consensus 232 s~D~~i~iwd~~~~~~~----------------~~~~~~~~~~~~v~~~~~spdg~~la-~~~~d-~i~~w~~~~ 288 (302)
+.|+.|++||++..... ........|..+|.+++|+|+|++|+ +++.| .|++|+...
T Consensus 279 ~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 279 GGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp ETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred eCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 99999999999753211 01123356788999999999999998 68777 799999853
No 56
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.5e-33 Score=243.47 Aligned_cols=251 Identities=20% Similarity=0.271 Sum_probs=198.5
Q ss_pred ccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEE
Q 022111 5 KIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIW 84 (302)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iw 84 (302)
+.+.+|...|.+++|+|++++|++++.|+.|++|+.... ........+...+..+.+++. +++|++++.|+.+++|
T Consensus 80 ~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~l~s~s~d~~~~~~ 155 (340)
T 4aow_A 80 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG--TTTRRFVGHTKDVLSVAFSSD--NRQIVSGSRDKTIKLW 155 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEECTT--SSCEEEEETTSCEEEE
T ss_pred EEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeeccc--ceeeeecCCCCceeEEEEeec--CccceeecCCCeEEEE
Confidence 346789999999999999999999999999999998653 344556667778888888653 7899999999999999
Q ss_pred EcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCC
Q 022111 85 KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPG 164 (302)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 164 (302)
|..... .....+.+|...+.+++|+++.....+++++.|+.|++||+.... ....+ .+|...|++++|+|++
T Consensus 156 d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~--~~~~~-~~h~~~v~~~~~s~~~--- 227 (340)
T 4aow_A 156 NTLGVC--KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK--LKTNH-IGHTGYLNTVTVSPDG--- 227 (340)
T ss_dssp CTTSCE--EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE--EEEEE-CCCSSCEEEEEECTTS---
T ss_pred EeCCCc--eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc--eeeEe-cCCCCcEEEEEECCCC---
Confidence 986542 344556789999999999988666789999999999999987542 22333 3789999999999864
Q ss_pred ceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEecc
Q 022111 165 ALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAK 244 (302)
Q Consensus 165 ~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~ 244 (302)
.+|++|+.|+.|++||+++.. .+..+. +...|.+++|+|++ .+++++.|+.|++||++.
T Consensus 228 -----------~~l~s~s~Dg~i~iwd~~~~~----~~~~~~-~~~~v~~~~~~~~~-----~~~~~~~d~~i~iwd~~~ 286 (340)
T 4aow_A 228 -----------SLCASGGKDGQAMLWDLNEGK----HLYTLD-GGDIINALCFSPNR-----YWLCAATGPSIKIWDLEG 286 (340)
T ss_dssp -----------SEEEEEETTCEEEEEETTTTE----EEEEEE-CSSCEEEEEECSSS-----SEEEEEETTEEEEEETTT
T ss_pred -----------CEEEEEeCCCeEEEEEeccCc----eeeeec-CCceEEeeecCCCC-----ceeeccCCCEEEEEECCC
Confidence 789999999999999998752 333343 45679999999983 577888999999999875
Q ss_pred CCccee------eeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecC
Q 022111 245 EGEQWE------GRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAV 288 (302)
Q Consensus 245 ~~~~~~------~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~ 288 (302)
...... ......+...|.+++|+|||++|++|+.| .|+||+...
T Consensus 287 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 287 KIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp TEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred CeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 321100 01123566789999999999999999998 699999864
No 57
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=6.3e-34 Score=252.75 Aligned_cols=262 Identities=15% Similarity=0.172 Sum_probs=204.6
Q ss_pred cccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCC----ceEEEEecCcccCeEEEEeeCC--CCC---CEEEE
Q 022111 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSA----SQHLATLKGHRGPVWQVAWAHP--KFG---SILAS 74 (302)
Q Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~----~~~~~~~~~h~~~v~~v~~~~~--~~~---~~l~s 74 (302)
++++.+|++.|++++|+| ++|++|+.|++|++|++.... .+.+..+.+|...|.+++|+++ .++ ++|++
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 86 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEE
Confidence 345679999999999998 799999999999999997643 2246678899999999999863 126 89999
Q ss_pred EeCCCeEEEEEcCCCCc--eeEEEEecCC-----CCCeeEEEec----CCCCCcE-EEEEecCCcEEEEEecC------C
Q 022111 75 CSYDGQVIIWKEGNQND--WTQAHTFNDH-----KSSVNSIAWA----PHELGLS-LACGSSDGNISVFTATA------D 136 (302)
Q Consensus 75 ~s~D~~i~iwd~~~~~~--~~~~~~~~~h-----~~~i~~l~~~----pd~~~~~-l~sg~~d~~v~~~~~~~------~ 136 (302)
++.|+.|++||+..... ......+..| ...|.+++|+ |+ +.. |++++.|+.|++||+.. .
T Consensus 87 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 87 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRL--LSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC------CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCC--CceEEEEEeCCCcEEEEeCCcccccccc
Confidence 99999999999876532 0115567777 5999999999 87 568 99999999999999986 3
Q ss_pred CCee--ee-eec------ccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcccccccccccc
Q 022111 137 GGWD--TT-RID------QAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQM 207 (302)
Q Consensus 137 ~~~~--~~-~~~------~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~ 207 (302)
.... .. .+. ..|...+.+++|+|+ + .|++++.|+.|++||++++ ..+..+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------------~-~l~~~~~dg~i~i~d~~~~----~~~~~~~~ 225 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISER--------------G-LIATGFNNGTVQISELSTL----RPLYNFES 225 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTT--------------S-EEEEECTTSEEEEEETTTT----EEEEEEEC
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCC--------------c-eEEEEeCCCcEEEEECCCC----ceeEEEec
Confidence 3221 00 221 247788999999884 5 8999999999999999875 34455666
Q ss_pred ---C---CCceeEEEeeCCCCCCccEEEEEecC---CeEEEEEeccCCcceeeeeecc-------------CCCcEEEEE
Q 022111 208 ---H---SDWVRSVAWAPNLGLPKSTIASASQD---GTVVIWTCAKEGEQWEGRVLKD-------------FKTPVWSVS 265 (302)
Q Consensus 208 ---h---~~~v~~v~~~p~~~~~~~~l~s~s~D---~~i~iwd~~~~~~~~~~~~~~~-------------~~~~v~~~~ 265 (302)
| ...|.+++|+|++ .+|++++.| +.|++||++.... ...... +...|.+++
T Consensus 226 ~~~h~~~~~~i~~i~~~~~~----~~l~~~~~d~~~g~i~i~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 298 (397)
T 1sq9_A 226 QHSMINNSNSIRSVKFSPQG----SLLAIAHDSNSFGCITLYETEFGER---IGSLSVPTHSSQASLGEFAHSSWVMSLS 298 (397)
T ss_dssp CC---CCCCCEEEEEECSST----TEEEEEEEETTEEEEEEEETTTCCE---EEEECBC--------CCBSBSSCEEEEE
T ss_pred cccccccCCccceEEECCCC----CEEEEEecCCCCceEEEEECCCCcc---cceeccCcccccccccccccCCcEEEEE
Confidence 8 9999999999985 789999999 9999999976432 122344 778999999
Q ss_pred EccCCCEEEEecCC-ceEEeeecCCceEEEe
Q 022111 266 WSLTGNLLAVADAN-NVTLWKEAVDGEWQQV 295 (302)
Q Consensus 266 ~spdg~~la~~~~d-~i~~w~~~~~~~~~~~ 295 (302)
|+|++++|++++.| .|++|+..........
T Consensus 299 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 329 (397)
T 1sq9_A 299 FNDSGETLCSAGWDGKLRFWDVKTKERITTL 329 (397)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ECCCCCEEEEEeCCCeEEEEEcCCCceeEEE
Confidence 99999999999988 6999998655444333
No 58
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=6.4e-33 Score=246.36 Aligned_cols=262 Identities=19% Similarity=0.295 Sum_probs=202.0
Q ss_pred cccccccccceeEEEEcc-CCCEEEEeeCCCcEEEEeecCCCceEEEEe-----------cCcccCeEEEEeeCCCCCCE
Q 022111 4 QKIETGHEDTVHDVAMDF-YGKRLATASSDSSIKIIGLSNSASQHLATL-----------KGHRGPVWQVAWAHPKFGSI 71 (302)
Q Consensus 4 ~~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~-----------~~h~~~v~~v~~~~~~~~~~ 71 (302)
.+++.+|.+.|++++|+| ++++|++|+.|++|++|++........... .+|...|.+++|++. ++.+
T Consensus 36 ~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~ 114 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPH-DTGM 114 (408)
T ss_dssp EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTT-CTTC
T ss_pred eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccC-CCcE
Confidence 345678999999999999 999999999999999999865432211111 359999999999863 4789
Q ss_pred EEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCC-CCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCC
Q 022111 72 LASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHE-LGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPV 150 (302)
Q Consensus 72 l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~-~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~ 150 (302)
|++++.|+.|++||+.+.. ....+. +...+.++.|+|.. .+.++++++.|+.|++||+...... ..+ ..|..
T Consensus 115 l~s~~~d~~i~iwd~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~--~~~-~~~~~ 187 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTNTLQ---TADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS--HIL-QGHRQ 187 (408)
T ss_dssp EEEEETTSEEEEEETTTTE---EEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC--EEE-CCCCS
T ss_pred EEEEeCCCeEEEeeCCCCc---cceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee--eee-cCCCC
Confidence 9999999999999997753 344444 77889999999863 2458999999999999998754322 233 37888
Q ss_pred CeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcccc------------ccccccccCCCceeEEEee
Q 022111 151 GVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKM------------DCFPALQMHSDWVRSVAWA 218 (302)
Q Consensus 151 ~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~------------~~~~~~~~h~~~v~~v~~~ 218 (302)
.|.+++|+|++ ...|++++.|+.|++||++...... .....+.+|...|.+++|+
T Consensus 188 ~v~~~~~~~~~-------------~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 254 (408)
T 4a11_B 188 EILAVSWSPRY-------------DYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT 254 (408)
T ss_dssp CEEEEEECSSC-------------TTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEEC
T ss_pred cEEEEEECCCC-------------CcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEc
Confidence 99999999864 1368999999999999997653111 1122336799999999999
Q ss_pred CCCCCCccEEEEEecCCeEEEEEeccCCcce--------------------------------------------eeeee
Q 022111 219 PNLGLPKSTIASASQDGTVVIWTCAKEGEQW--------------------------------------------EGRVL 254 (302)
Q Consensus 219 p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~--------------------------------------------~~~~~ 254 (302)
|++ .+|++++.|+.|++||++...... ....+
T Consensus 255 ~~~----~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~ 330 (408)
T 4a11_B 255 SDG----LHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITML 330 (408)
T ss_dssp TTS----SEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEE
T ss_pred CCC----CEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeee
Confidence 985 789999999999999987532110 01112
Q ss_pred ccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCc
Q 022111 255 KDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDG 290 (302)
Q Consensus 255 ~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~ 290 (302)
..|...|.+++|+|+|++|++++.| .|++|+.....
T Consensus 331 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 331 KGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC--
T ss_pred ccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCC
Confidence 4567889999999999999999988 79999986543
No 59
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.4e-33 Score=254.28 Aligned_cols=259 Identities=12% Similarity=0.206 Sum_probs=192.6
Q ss_pred ccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCC---------ceEEEEecCcc------------cCeEEEEeeCCC
Q 022111 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSA---------SQHLATLKGHR------------GPVWQVAWAHPK 67 (302)
Q Consensus 9 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~---------~~~~~~~~~h~------------~~v~~v~~~~~~ 67 (302)
.|.+.|++++|+|++++||+|+.|+.|+||++.... .+....+.+|. ..|.+++|+++.
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 467899999999999999999999999999986532 12466788998 889999998752
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCCce------------------------------------eEEEE-ecCCCCCeeEEEe
Q 022111 68 FGSILASCSYDGQVIIWKEGNQNDW------------------------------------TQAHT-FNDHKSSVNSIAW 110 (302)
Q Consensus 68 ~~~~l~s~s~D~~i~iwd~~~~~~~------------------------------------~~~~~-~~~h~~~i~~l~~ 110 (302)
...+|++++.|++|++||+...... .+... ..+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 2278999999999999998642110 01112 3679999999999
Q ss_pred cCCCCCcEEEEEecCCcEEEEEecCCCC-eeeee----ecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCC
Q 022111 111 APHELGLSLACGSSDGNISVFTATADGG-WDTTR----IDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN 185 (302)
Q Consensus 111 ~pd~~~~~l~sg~~d~~v~~~~~~~~~~-~~~~~----~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ 185 (302)
+|+ +.+|++| .|+.|++||+..... ..... ....|...|.+++|+|++ ..+|++|+.|+
T Consensus 186 ~~~--~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-------------~~~l~s~~~dg 249 (447)
T 3dw8_B 186 NSD--YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNS-------------CNTFVYSSSKG 249 (447)
T ss_dssp CTT--SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSC-------------TTEEEEEETTS
T ss_pred cCC--CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCC-------------CcEEEEEeCCC
Confidence 998 6789998 799999999873221 11110 123788899999999863 26899999999
Q ss_pred cEEEEEEecCccccccccccccCCC------------ceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeee
Q 022111 186 TVKVWKMYNGIWKMDCFPALQMHSD------------WVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRV 253 (302)
Q Consensus 186 ~v~iwd~~~~~~~~~~~~~~~~h~~------------~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~ 253 (302)
.|++||++++.........+.+|.. .|.+++|+|++ .+|++++. +.|++||++...... ..
T Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g----~~l~~~~~-~~v~iwd~~~~~~~~--~~ 322 (447)
T 3dw8_B 250 TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSG----RYMMTRDY-LSVKVWDLNMENRPV--ET 322 (447)
T ss_dssp CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTS----SEEEEEES-SEEEEEETTCCSSCS--CC
T ss_pred eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCC----CEEEEeeC-CeEEEEeCCCCcccc--ce
Confidence 9999999876421112345666765 89999999985 78999999 999999997522211 11
Q ss_pred eccCCC---------------cEEEEEEccCCCEEEEecCC-ceEEeeecCCc
Q 022111 254 LKDFKT---------------PVWSVSWSLTGNLLAVADAN-NVTLWKEAVDG 290 (302)
Q Consensus 254 ~~~~~~---------------~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~ 290 (302)
...+.. .+.+++|+|+|++|++++.| .|++|+.....
T Consensus 323 ~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 323 YQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKR 375 (447)
T ss_dssp EESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCC
T ss_pred eeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCc
Confidence 222221 13359999999999999988 79999986543
No 60
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-33 Score=251.24 Aligned_cols=246 Identities=24% Similarity=0.404 Sum_probs=199.5
Q ss_pred ccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCC
Q 022111 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGN 88 (302)
Q Consensus 9 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~ 88 (302)
.|...|++++|+|++++|++|+.|+.|++|++... +.+..+.+|...|.+++|. +++|++++.|+.|++||++.
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~----~~~l~~~~~dg~i~i~d~~~ 205 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ--TKLRTMAGHQARVGCLSWN----RHVLSSGSRSGAIHHHDVRI 205 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEEEE----TTEEEEEETTSEEEEEETTS
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC--eEEEEecCCCCceEEEEEC----CCEEEEEcCCCCEEEEeccc
Confidence 48899999999999999999999999999998653 4667888999999999994 57999999999999999974
Q ss_pred CCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceee
Q 022111 89 QNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVG 168 (302)
Q Consensus 89 ~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 168 (302)
.. .....+.+|...|.+++|+|+ +.+|++|+.|+.|++||+.... ....+ ..|...|.+++|+|++
T Consensus 206 ~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~--~~~~~-~~~~~~v~~~~~~p~~------- 271 (401)
T 4aez_A 206 AN--HQIGTLQGHSSEVCGLAWRSD--GLQLASGGNDNVVQIWDARSSI--PKFTK-TNHNAAVKAVAWCPWQ------- 271 (401)
T ss_dssp SS--CEEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTCSS--EEEEE-CCCSSCCCEEEECTTS-------
T ss_pred Cc--ceeeEEcCCCCCeeEEEEcCC--CCEEEEEeCCCeEEEccCCCCC--ccEEe-cCCcceEEEEEECCCC-------
Confidence 43 356678889999999999997 6799999999999999987532 22233 3688899999999964
Q ss_pred cccCCCceeEEEee--CCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEE--EecCCeEEEEEecc
Q 022111 169 LGLLDPVQKLASCG--CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIAS--ASQDGTVVIWTCAK 244 (302)
Q Consensus 169 ~~~~~~~~~l~s~~--~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s--~s~D~~i~iwd~~~ 244 (302)
..++++++ .|+.|++||+.++. .+..+ .|...|.+++|+|++ ..|++ |+.|+.|++||+..
T Consensus 272 ------~~ll~~~~gs~d~~i~i~d~~~~~----~~~~~-~~~~~v~~~~~s~~~----~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 272 ------SNLLATGGGTMDKQIHFWNAATGA----RVNTV-DAGSQVTSLIWSPHS----KEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp ------TTEEEEECCTTTCEEEEEETTTCC----EEEEE-ECSSCEEEEEECSSS----SEEEEEECTTTCEEEEEEEET
T ss_pred ------CCEEEEecCCCCCEEEEEECCCCC----EEEEE-eCCCcEEEEEECCCC----CeEEEEeecCCCcEEEEecCC
Confidence 35677765 79999999998763 23333 366789999999985 67777 45899999999976
Q ss_pred CCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCc
Q 022111 245 EGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDG 290 (302)
Q Consensus 245 ~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~ 290 (302)
.... ....+..|...|.+++|+|+|++|++++.| .|++|+.....
T Consensus 337 ~~~~-~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 337 SGLT-KQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp TEEE-EEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred ccce-eEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 4221 112235778899999999999999999988 79999986543
No 61
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=6e-33 Score=249.48 Aligned_cols=246 Identities=24% Similarity=0.429 Sum_probs=198.0
Q ss_pred cccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcC
Q 022111 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEG 87 (302)
Q Consensus 8 ~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~ 87 (302)
.+|...|++++|+|+|++||+|+.|++|+|||+.. .+.+..+.+|...+.++++. +.+|++|+.|+.+++||..
T Consensus 144 ~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~--~~~~~~~~~h~~~v~~~s~~----~~~l~sgs~d~~i~~~d~~ 217 (420)
T 4gga_A 144 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ--QKRLRNMTSHSARVGSLSWN----SYILSSGSRSGHIHHHDVR 217 (420)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEEE----TTEEEEEETTSEEEEEETT
T ss_pred cCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCC--CcEEEEEeCCCCceEEEeeC----CCEEEEEeCCCceeEeeec
Confidence 46888999999999999999999999999999865 46778899999999999885 5799999999999999986
Q ss_pred CCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCe-eeeeecccCCCCeEEEEeCCCCCCCce
Q 022111 88 NQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGW-DTTRIDQAHPVGVTSVSWAPAMAPGAL 166 (302)
Q Consensus 88 ~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~ 166 (302)
... ..+.++.+|...+..+.|+|+ +.++++++.|+.+++|+....... ........|...|.+++|+|..
T Consensus 218 ~~~--~~~~~~~~h~~~~~~~~~~~~--g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~----- 288 (420)
T 4gga_A 218 VAE--HHVATLSGHSQEVCGLRWAPD--GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQ----- 288 (420)
T ss_dssp SSS--CEEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTC-----
T ss_pred ccc--eeeEEecccccceeeeeecCC--CCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCc-----
Confidence 643 356678899999999999998 679999999999999998754321 1112223688889999999864
Q ss_pred eecccCCCceeEEE--eeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEe--cCCeEEEEEe
Q 022111 167 VGLGLLDPVQKLAS--CGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS--QDGTVVIWTC 242 (302)
Q Consensus 167 ~~~~~~~~~~~l~s--~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s--~D~~i~iwd~ 242 (302)
...+++ |+.|++|+|||+.++. +...+. +...|.++.|+|++ ..+++++ .|+.|+|||+
T Consensus 289 --------~~~la~~~gs~D~~I~iwd~~t~~----~~~~~~-~~~~v~~~~~~~~~----~~lv~~sg~~d~~I~iwd~ 351 (420)
T 4gga_A 289 --------SNVLATGGGTSDRHIRIWNVCSGA----CLSAVD-AHSQVCSILWSPHY----KELISGHGFAQNQLVIWKY 351 (420)
T ss_dssp --------TTEEEEEECTTTCEEEEEETTTTE----EEEEEE-CSSCEEEEEEETTT----TEEEEEECTTTCCEEEEET
T ss_pred --------ccEEEEEeecCCCEEEEEeCCccc----cceeec-cccceeeeeecCCC----CeEEEEEecCCCEEEEEEC
Confidence 245554 5679999999998763 333333 34568999999985 4555544 7999999999
Q ss_pred ccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecC
Q 022111 243 AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAV 288 (302)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~ 288 (302)
.+... ...+.+|...|++++|||||++|++|+.| .|+||+..+
T Consensus 352 ~~~~~---v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 352 PTMAK---VAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp TTCCE---EEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred CCCcE---EEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 76432 23457889999999999999999999999 799999743
No 62
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.1e-32 Score=238.66 Aligned_cols=248 Identities=17% Similarity=0.252 Sum_probs=201.5
Q ss_pred cccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCC-ceEEEEe--cCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEE
Q 022111 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSA-SQHLATL--KGHRGPVWQVAWAHPKFGSILASCSYDGQVIIW 84 (302)
Q Consensus 8 ~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~-~~~~~~~--~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iw 84 (302)
.+|...|++++|+|++++|++++ |+.|++|++.... ...+..+ .+|...|.+++|+++ +++|++++.|+.|++|
T Consensus 48 ~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~ 124 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPD--GCTLIVGGEASTLSIW 124 (337)
T ss_dssp ECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTT--SSEEEEEESSSEEEEE
T ss_pred ccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCC--CCEEEEEcCCCcEEEE
Confidence 47999999999999999999998 9999999986532 1223333 379999999999864 7899999999999999
Q ss_pred EcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCC
Q 022111 85 KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPG 164 (302)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 164 (302)
|+++.. ......+..|...|.+++|+|+ +.++++++.|+.|++||+.... ....+ ..|...+.+++|+|++
T Consensus 125 d~~~~~-~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~v~~~d~~~~~--~~~~~-~~~~~~i~~~~~~~~~--- 195 (337)
T 1gxr_A 125 DLAAPT-PRIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLHNQT--LVRQF-QGHTDGASCIDISNDG--- 195 (337)
T ss_dssp ECCCC---EEEEEEECSSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTTE--EEEEE-CCCSSCEEEEEECTTS---
T ss_pred ECCCCC-cceeeecccCCCceEEEEECCC--CCEEEEEeCCCcEEEEeCCCCc--eeeee-ecccCceEEEEECCCC---
Confidence 997653 2345667789999999999997 6689999999999999987542 22333 3688899999999863
Q ss_pred ceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEecc
Q 022111 165 ALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAK 244 (302)
Q Consensus 165 ~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~ 244 (302)
..|++++.|+.|++||++++. .... ..|...|.+++|+|++ ..|++++.|+.|++||++.
T Consensus 196 -----------~~l~~~~~dg~i~~~d~~~~~----~~~~-~~~~~~v~~~~~s~~~----~~l~~~~~~~~i~~~~~~~ 255 (337)
T 1gxr_A 196 -----------TKLWTGGLDNTVRSWDLREGR----QLQQ-HDFTSQIFSLGYCPTG----EWLAVGMESSNVEVLHVNK 255 (337)
T ss_dssp -----------SEEEEEETTSEEEEEETTTTE----EEEE-EECSSCEEEEEECTTS----SEEEEEETTSCEEEEETTS
T ss_pred -----------CEEEEEecCCcEEEEECCCCc----eEee-ecCCCceEEEEECCCC----CEEEEEcCCCcEEEEECCC
Confidence 789999999999999998763 2222 2477889999999985 7899999999999999976
Q ss_pred CCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCce
Q 022111 245 EGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGE 291 (302)
Q Consensus 245 ~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~ 291 (302)
... .....+..+|.+++|+|+|++|++++.| .|++|+......
T Consensus 256 ~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 256 PDK----YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS 299 (337)
T ss_dssp SCE----EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred CCe----EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeE
Confidence 431 2345678899999999999999999888 699999865443
No 63
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.2e-33 Score=252.83 Aligned_cols=250 Identities=19% Similarity=0.265 Sum_probs=193.9
Q ss_pred cccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
.+.+|...|++++|+|++++|++|+.|++|++||+... +.+..+.+|...|.+++|+++ +++|++++.|++|++||
T Consensus 134 ~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~--~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd 209 (420)
T 3vl1_A 134 IDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG--SNPRTLIGHRATVTDIAIIDR--GRNVLSASLDGTIRLWE 209 (420)
T ss_dssp ETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--CCCEEEECCSSCEEEEEEETT--TTEEEEEETTSCEEEEE
T ss_pred ecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC--cCceEEcCCCCcEEEEEEcCC--CCEEEEEcCCCcEEEeE
Confidence 35689999999999999999999999999999999653 356678899999999999874 78999999999999999
Q ss_pred cCCCCceeEEEEecC---CCCCeeE---------------------EEecCCCCCcEEEEEecCCcEEEEEecCCCCeee
Q 022111 86 EGNQNDWTQAHTFND---HKSSVNS---------------------IAWAPHELGLSLACGSSDGNISVFTATADGGWDT 141 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~---h~~~i~~---------------------l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~ 141 (302)
+++.. ....+.. |...|.+ ++|+|+ +.+|++|+.|+.|++||++... ..
T Consensus 210 ~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~i~d~~~~~--~~ 282 (420)
T 3vl1_A 210 CGTGT---TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTY--GKYVIAGHVSGVITVHNVFSKE--QT 282 (420)
T ss_dssp TTTTE---EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCT--TEEEEEEETTSCEEEEETTTCC--EE
T ss_pred CCCCc---eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCC--CCEEEEEcCCCeEEEEECCCCc--ee
Confidence 97653 4445543 3444444 455666 6799999999999999987543 22
Q ss_pred eeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcccccccccccc-CCCceeEEEeeCC
Q 022111 142 TRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQM-HSDWVRSVAWAPN 220 (302)
Q Consensus 142 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~ 220 (302)
..+...|...+.+++|+|++ ..+|++|+.|+.|++||++++.. .+..+.+ |...|.++.|. +
T Consensus 283 ~~~~~~~~~~v~~~~~~~~~-------------~~~l~~g~~dg~i~vwd~~~~~~---~~~~~~~~~~~~v~~~~~~-~ 345 (420)
T 3vl1_A 283 IQLPSKFTCSCNSLTVDGNN-------------ANYIYAGYENGMLAQWDLRSPEC---PVGEFLINEGTPINNVYFA-A 345 (420)
T ss_dssp EEECCTTSSCEEEEEECSSC-------------TTEEEEEETTSEEEEEETTCTTS---CSEEEEESTTSCEEEEEEE-T
T ss_pred EEcccccCCCceeEEEeCCC-------------CCEEEEEeCCCeEEEEEcCCCcC---chhhhhccCCCCceEEEeC-C
Confidence 33444688899999999864 13899999999999999987632 2344555 67889998665 4
Q ss_pred CCCCccEEEEEecCCeEEEEEeccCCcce------eeeeeccCCCcEEEEEEccCCC----EEEEecCCceEEeeec
Q 022111 221 LGLPKSTIASASQDGTVVIWTCAKEGEQW------EGRVLKDFKTPVWSVSWSLTGN----LLAVADANNVTLWKEA 287 (302)
Q Consensus 221 ~~~~~~~l~s~s~D~~i~iwd~~~~~~~~------~~~~~~~~~~~v~~~~~spdg~----~la~~~~d~i~~w~~~ 287 (302)
+ ..|++++.|+.|++|++....... .......+...|.+++|+|+++ ++++++.+.+.+|+..
T Consensus 346 ~----~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~ 418 (420)
T 3vl1_A 346 G----ALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLS 418 (420)
T ss_dssp T----EEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESC
T ss_pred C----CEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEecc
Confidence 3 789999999999999987632111 1123345677899999999998 6666655589999864
No 64
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=7.9e-34 Score=249.84 Aligned_cols=205 Identities=23% Similarity=0.366 Sum_probs=173.7
Q ss_pred ccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEc
Q 022111 7 ETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE 86 (302)
Q Consensus 7 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~ 86 (302)
+.+|...|.+++|+++++.|++++.|++|++||+.. .+.+..+.+|...|.+++|++..++++|++|+.|++|++||+
T Consensus 150 ~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~--~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~ 227 (354)
T 2pbi_B 150 VAMHTNYLSACSFTNSDMQILTASGDGTCALWDVES--GQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDM 227 (354)
T ss_dssp EEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTT--CCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEET
T ss_pred eeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCC--CeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEEC
Confidence 457999999999999999999999999999999865 356778899999999999976545789999999999999999
Q ss_pred CCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCce
Q 022111 87 GNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL 166 (302)
Q Consensus 87 ~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 166 (302)
+++ .+...+.+|...|++++|+|+ +.+|++|+.|++|++||++......... ...+...+.++.|+|+
T Consensus 228 ~~~---~~~~~~~~h~~~v~~v~~~p~--~~~l~s~s~D~~v~lwd~~~~~~~~~~~-~~~~~~~~~~~~~s~~------ 295 (354)
T 2pbi_B 228 RSG---QCVQAFETHESDVNSVRYYPS--GDAFASGSDDATCRLYDLRADREVAIYS-KESIIFGASSVDFSLS------ 295 (354)
T ss_dssp TTC---CEEEEECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTTEEEEEEC-CTTCCSCEEEEEECTT------
T ss_pred CCC---cEEEEecCCCCCeEEEEEeCC--CCEEEEEeCCCeEEEEECCCCcEEEEEc-CCCcccceeEEEEeCC------
Confidence 875 367788899999999999998 6699999999999999987543221111 1123456889999986
Q ss_pred eecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEE
Q 022111 167 VGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWT 241 (302)
Q Consensus 167 ~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd 241 (302)
+.+|++|+.|++|++||+.++ ..+..+.+|.+.|.+++|+|++ .+|++|+.|++|+||+
T Consensus 296 --------g~~l~~g~~d~~i~vwd~~~~----~~~~~l~~h~~~v~~l~~spdg----~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 296 --------GRLLFAGYNDYTINVWDVLKG----SRVSILFGHENRVSTLRVSPDG----TAFCSGSWDHTLRVWA 354 (354)
T ss_dssp --------SSEEEEEETTSCEEEEETTTC----SEEEEECCCSSCEEEEEECTTS----SCEEEEETTSEEEEEC
T ss_pred --------CCEEEEEECCCcEEEEECCCC----ceEEEEECCCCcEEEEEECCCC----CEEEEEcCCCCEEecC
Confidence 478999999999999999765 3455678999999999999996 7799999999999995
No 65
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.3e-34 Score=247.58 Aligned_cols=225 Identities=28% Similarity=0.464 Sum_probs=178.5
Q ss_pred cccccccceeEEEEcc--CCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEE
Q 022111 6 IETGHEDTVHDVAMDF--YGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~--~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~i 83 (302)
.+.+|.+.|++++|++ ++++|+||+.|++|++||+..+.......+.+|...|.+++|+|+..+.+|++|+.|++|++
T Consensus 52 ~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~l 131 (316)
T 3bg1_A 52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISL 131 (316)
T ss_dssp EEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEE
T ss_pred EEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEE
Confidence 4668999999999975 48999999999999999987644345667889999999999987544789999999999999
Q ss_pred EEcCCCCceeEEEEecCCCCCeeEEEecCCCC---------------CcEEEEEecCCcEEEEEecCCCCeeeeeecccC
Q 022111 84 WKEGNQNDWTQAHTFNDHKSSVNSIAWAPHEL---------------GLSLACGSSDGNISVFTATADGGWDTTRIDQAH 148 (302)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~---------------~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h 148 (302)
||++....+.....+.+|...|.+++|+|+.. +.+|++|+.|++|++||......+.......+|
T Consensus 132 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h 211 (316)
T 3bg1_A 132 LTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAH 211 (316)
T ss_dssp EEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCC
T ss_pred EecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccC
Confidence 99976544444556778999999999999721 357999999999999999654333332222479
Q ss_pred CCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEE
Q 022111 149 PVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTI 228 (302)
Q Consensus 149 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l 228 (302)
...|.+++|+|+... ++.+|++|+.|++|+|||+.+..........+.+|.+.|.+++|+|++ .+|
T Consensus 212 ~~~V~~v~~sp~~~~----------~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g----~~l 277 (316)
T 3bg1_A 212 SDWVRDVAWAPSIGL----------PTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITA----NIL 277 (316)
T ss_dssp SSCEEEEECCCCSSC----------SCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTT----CCE
T ss_pred CCceEEEEecCCCCC----------CCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCC----CEE
Confidence 999999999996411 136899999999999999876311101122345789999999999996 779
Q ss_pred EEEecCCeEEEEEecc
Q 022111 229 ASASQDGTVVIWTCAK 244 (302)
Q Consensus 229 ~s~s~D~~i~iwd~~~ 244 (302)
|+++.|++|+||+...
T Consensus 278 as~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 278 AVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEESSSCEEEEEECT
T ss_pred EEEcCCCeEEEEEECC
Confidence 9999999999999764
No 66
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.6e-33 Score=269.79 Aligned_cols=256 Identities=18% Similarity=0.201 Sum_probs=210.2
Q ss_pred CCcccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeE
Q 022111 2 PAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQV 81 (302)
Q Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i 81 (302)
..++++.+|.+.|++++|+|++++||+++.|+.|+|||+.. +..+..+.+|.+.|.+++|+++ +++|++++.|+.|
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~--~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i 79 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYET--QVEVRSIQVTETPVRAGKFIAR--KNWIIVGSDDFRI 79 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEEEGG--GTEEEEEETTSEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCC--CceEEEEecCCCcEEEEEEeCC--CCEEEEEeCCCeE
Confidence 34567889999999999999999999999999999999865 4567788899999999999874 7899999999999
Q ss_pred EEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCC
Q 022111 82 IIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAM 161 (302)
Q Consensus 82 ~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 161 (302)
++||+.++. ....+.+|.+.|.+++|+|+ +..|++++.|+.|++|++..... ....+ ..|...+.+++|+|..
T Consensus 80 ~vw~~~~~~---~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~vw~~~~~~~-~~~~~-~~~~~~v~~~~~~p~~ 152 (814)
T 3mkq_A 80 RVFNYNTGE---KVVDFEAHPDYIRSIAVHPT--KPYVLSGSDDLTVKLWNWENNWA-LEQTF-EGHEHFVMCVAFNPKD 152 (814)
T ss_dssp EEEETTTCC---EEEEEECCSSCEEEEEECSS--SSEEEEEETTSEEEEEEGGGTSE-EEEEE-ECCSSCEEEEEEETTE
T ss_pred EEEECCCCc---EEEEEecCCCCEEEEEEeCC--CCEEEEEcCCCEEEEEECCCCce-EEEEE-cCCCCcEEEEEEEcCC
Confidence 999997753 56677889999999999998 66899999999999999875422 22233 3788899999999832
Q ss_pred CCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccc-cCCCceeEEEeeCCCCCCccEEEEEecCCeEEEE
Q 022111 162 APGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQ-MHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240 (302)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iw 240 (302)
+..|++++.|+.|++||+.++. ....+. .|...|.+++|+|.. ++..|++++.|+.|++|
T Consensus 153 -------------~~~l~~~~~dg~v~vwd~~~~~----~~~~~~~~~~~~v~~~~~~~~~--~~~~l~~~~~dg~i~~~ 213 (814)
T 3mkq_A 153 -------------PSTFASGCLDRTVKVWSLGQST----PNFTLTTGQERGVNYVDYYPLP--DKPYMITASDDLTIKIW 213 (814)
T ss_dssp -------------EEEEEEEETTSEEEEEETTCSS----CSEEEECCCTTCCCEEEECCST--TCCEEEEECTTSEEEEE
T ss_pred -------------CCEEEEEeCCCeEEEEECCCCc----ceeEEecCCCCCEEEEEEEECC--CCCEEEEEeCCCEEEEE
Confidence 4789999999999999987653 222333 345889999999931 14789999999999999
Q ss_pred EeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCc
Q 022111 241 TCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDG 290 (302)
Q Consensus 241 d~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~ 290 (302)
|++.... ......+..+|.+++|+|+|++|++++.| .|++|+.....
T Consensus 214 d~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 214 DYQTKSC---VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp ETTTTEE---EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS
T ss_pred ECCCCcE---EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 9875421 23345677899999999999999999988 69999986533
No 67
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.6e-33 Score=250.18 Aligned_cols=260 Identities=16% Similarity=0.245 Sum_probs=200.5
Q ss_pred cccccccceeEEEEcc-CCCEEEEeeCCCcEEEEeecCCCc-----eEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCC
Q 022111 6 IETGHEDTVHDVAMDF-YGKRLATASSDSSIKIIGLSNSAS-----QHLATLKGHRGPVWQVAWAHPKFGSILASCSYDG 79 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~v~lw~~~~~~~-----~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~ 79 (302)
.+.+|.+.|++++|+| ++++|++|+.|++|++|++..... +++..+.+|...|.+++|+++ ..++|++++.|+
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~-~~~~l~s~~~dg 154 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPT-AQNVLLSAGCDN 154 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSS-BTTEEEEEETTS
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcC-CCCEEEEEcCCC
Confidence 4668999999999999 899999999999999999865421 356778899999999999864 236999999999
Q ss_pred eEEEEEcCCCCceeEEEEe--cCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCC-eEEEE
Q 022111 80 QVIIWKEGNQNDWTQAHTF--NDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVG-VTSVS 156 (302)
Q Consensus 80 ~i~iwd~~~~~~~~~~~~~--~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~-v~~~~ 156 (302)
+|++||+++. .....+ ..|...|.+++|+|+ +.+|++++.|+.|++||++... ....+...|... +.++.
T Consensus 155 ~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~ 227 (402)
T 2aq5_A 155 VILVWDVGTG---AAVLTLGPDVHPDTIYSVDWSRD--GALICTSCRDKRVRVIEPRKGT--VVAEKDRPHEGTRPVHAV 227 (402)
T ss_dssp CEEEEETTTT---EEEEEECTTTCCSCEEEEEECTT--SSCEEEEETTSEEEEEETTTTE--EEEEEECSSCSSSCCEEE
T ss_pred EEEEEECCCC---CccEEEecCCCCCceEEEEECCC--CCEEEEEecCCcEEEEeCCCCc--eeeeeccCCCCCcceEEE
Confidence 9999999765 356677 789999999999997 6689999999999999987542 223332356554 88999
Q ss_pred eCCCCCCCceeecccCCCceeEEEe---eCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEE-EEEe
Q 022111 157 WAPAMAPGALVGLGLLDPVQKLASC---GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTI-ASAS 232 (302)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~l~s~---~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l-~s~s 232 (302)
|+|+ +.+|++| +.|+.|++||+++...... .....|...|.+++|+|++ ..| ++|+
T Consensus 228 ~~~~--------------~~~l~~g~~~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~v~~~~~s~~~----~~l~~~g~ 287 (402)
T 2aq5_A 228 FVSE--------------GKILTTGFSRMSERQVALWDTKHLEEPLS--LQELDTSSGVLLPFFDPDT----NIVYLCGK 287 (402)
T ss_dssp ECST--------------TEEEEEEECTTCCEEEEEEETTBCSSCSE--EEECCCCSSCEEEEEETTT----TEEEEEET
T ss_pred EcCC--------------CcEEEEeccCCCCceEEEEcCccccCCce--EEeccCCCceeEEEEcCCC----CEEEEEEc
Confidence 9986 3788888 7899999999987532111 1112577789999999996 556 5677
Q ss_pred cCCeEEEEEeccCCcceeeeeec--cCCCcEEEEEEccCCCEEEEecCCceEEeeecCCceEEEeee
Q 022111 233 QDGTVVIWTCAKEGEQWEGRVLK--DFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVDGEWQQVSV 297 (302)
Q Consensus 233 ~D~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~spdg~~la~~~~d~i~~w~~~~~~~~~~~~~ 297 (302)
.|+.|++||+....... ..+. .+..+|.+++|+|++.+++++ .+.+++|+... +..++...
T Consensus 288 ~dg~i~i~d~~~~~~~~--~~l~~~~~~~~v~~~~~sp~~~~~~s~-~~~~~~~~l~~-~~~~~i~~ 350 (402)
T 2aq5_A 288 GDSSIRYFEITSEAPFL--HYLSMFSSKESQRGMGYMPKRGLEVNK-CEIARFYKLHE-RKCEPIAM 350 (402)
T ss_dssp TCSCEEEEEECSSTTCE--EEEEEECCSSCCSEEEECCGGGSCGGG-TEEEEEEEEET-TEEEEEEE
T ss_pred CCCeEEEEEecCCCcce--EeecccccCCcccceEEecccccceec-ceeEEEEEcCC-CcEEEEEE
Confidence 89999999998653211 1222 245789999999999987654 33799999864 45555433
No 68
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.5e-33 Score=245.46 Aligned_cols=255 Identities=17% Similarity=0.258 Sum_probs=187.1
Q ss_pred ccccccccceeEEEEccC---CCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeE
Q 022111 5 KIETGHEDTVHDVAMDFY---GKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQV 81 (302)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~---~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i 81 (302)
+++.+|.+.|++++|+|+ |++|++|+.|++|++|++..........+.+|.+.|.+++|+++ +++|++++.|+.|
T Consensus 33 ~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~v 110 (368)
T 3mmy_A 33 EVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDD--GSKVFTASCDKTA 110 (368)
T ss_dssp ECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTT--SSEEEEEETTSEE
T ss_pred EeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcC--CCEEEEEcCCCcE
Confidence 456799999999999999 59999999999999999975333344678899999999999864 7899999999999
Q ss_pred EEEEcCCCCceeEEEEecCCCCCeeEEEe--cCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCC
Q 022111 82 IIWKEGNQNDWTQAHTFNDHKSSVNSIAW--APHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159 (302)
Q Consensus 82 ~iwd~~~~~~~~~~~~~~~h~~~i~~l~~--~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 159 (302)
++||+++.. .. .+..|...|.+++| +|+ +.+|++++.|+.|++||++...... .+. .+ ..+.++.+.+
T Consensus 111 ~iwd~~~~~---~~-~~~~~~~~v~~~~~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~--~~~-~~-~~~~~~~~~~ 180 (368)
T 3mmy_A 111 KMWDLSSNQ---AI-QIAQHDAPVKTIHWIKAPN--YSCVMTGSWDKTLKFWDTRSSNPMM--VLQ-LP-ERCYCADVIY 180 (368)
T ss_dssp EEEETTTTE---EE-EEEECSSCEEEEEEEECSS--CEEEEEEETTSEEEEECSSCSSCSE--EEE-CS-SCEEEEEEET
T ss_pred EEEEcCCCC---ce-eeccccCceEEEEEEeCCC--CCEEEEccCCCcEEEEECCCCcEEE--EEe-cC-CCceEEEecC
Confidence 999997653 22 34569999999999 665 7789999999999999987543322 111 11 1222222221
Q ss_pred CC-----------------C-------------CCceeecccCC--CceeEEEeeCCCcEEEEEEecCcccccccccccc
Q 022111 160 AM-----------------A-------------PGALVGLGLLD--PVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQM 207 (302)
Q Consensus 160 ~~-----------------~-------------~~~~~~~~~~~--~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~ 207 (302)
.. . ....+.+.... ....+++++.|+.|++||++.... ......+.+
T Consensus 181 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~-~~~~~~~~~ 259 (368)
T 3mmy_A 181 PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP-AKDNFTFKC 259 (368)
T ss_dssp TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCH-HHHSEEEEC
T ss_pred CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCc-cccceeeee
Confidence 10 0 00000000000 113399999999999999976521 123345556
Q ss_pred CCC------------ceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEE
Q 022111 208 HSD------------WVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAV 275 (302)
Q Consensus 208 h~~------------~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~ 275 (302)
|.. .|.+++|+|++ .+|++++.|+.|++||++... ....+..+..+|.+++|+|+|++|++
T Consensus 260 ~~~~~~~~~~~~~~~~v~~~~~sp~~----~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~v~~~~~s~~g~~l~~ 332 (368)
T 3mmy_A 260 HRSNGTNTSAPQDIYAVNGIAFHPVH----GTLATVGSDGRFSFWDKDART---KLKTSEQLDQPISACCFNHNGNIFAY 332 (368)
T ss_dssp SEEC----CCCEEECCEEEEEECTTT----CCEEEEETTSCEEEEETTTTE---EEEECCCCSSCEEEEEECTTSSCEEE
T ss_pred eecccccccccccccceEEEEEecCC----CEEEEEccCCeEEEEECCCCc---EEEEecCCCCCceEEEECCCCCeEEE
Confidence 655 79999999985 679999999999999997542 12334577889999999999999999
Q ss_pred ecCC
Q 022111 276 ADAN 279 (302)
Q Consensus 276 ~~~d 279 (302)
++.|
T Consensus 333 ~s~d 336 (368)
T 3mmy_A 333 ASSY 336 (368)
T ss_dssp EECC
T ss_pred Eecc
Confidence 9876
No 69
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.6e-34 Score=257.81 Aligned_cols=252 Identities=17% Similarity=0.229 Sum_probs=168.9
Q ss_pred cccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCce---EEEEecCcccCeEEEEeeC------CCCCCEEEEEeCCCe
Q 022111 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQ---HLATLKGHRGPVWQVAWAH------PKFGSILASCSYDGQ 80 (302)
Q Consensus 10 h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~---~~~~~~~h~~~v~~v~~~~------~~~~~~l~s~s~D~~ 80 (302)
|...+....+++++++||+++.|++|+|||...+... .+..+.+|.+.|++|+|+| +.++++|||||.|++
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~t 167 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCT 167 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSE
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCe
Confidence 4444444555667789999999999999998764322 2345689999999999985 124789999999999
Q ss_pred EEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeee-ee----------------
Q 022111 81 VIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDT-TR---------------- 143 (302)
Q Consensus 81 i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~-~~---------------- 143 (302)
|+|||+++.. +...+..|..+|.+++|+|+. ..+|++|+.|++|++||++....... ..
T Consensus 168 v~~Wd~~~~~---~~~~~~~~~~~v~~v~~~p~~-~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~ 243 (393)
T 4gq1_A 168 LIIWRLTDEG---PILAGYPLSSPGISVQFRPSN-PNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLP 243 (393)
T ss_dssp EEEEEEETTE---EEEEEEECSSCEEEEEEETTE-EEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGG
T ss_pred EEEEECCCCc---eeeeecCCCCCcEEEEECCCC-CceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccc
Confidence 9999997653 445556688999999999973 35799999999999999875432110 00
Q ss_pred -----ecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEE---
Q 022111 144 -----IDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSV--- 215 (302)
Q Consensus 144 -----~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v--- 215 (302)
...+|...+.++.|++ +++..|++++.|+++++||+..+. ....+..|...+..+
T Consensus 244 ~~~~~~~~~~~~~v~~v~~~~-------------~dg~~l~s~s~d~~i~vwd~~~~~----~~~~l~~~~~~~~~~~~~ 306 (393)
T 4gq1_A 244 LVNTCHSSGIASSLANVRWIG-------------SDGSGILAMCKSGAWLRWNLFANN----DYNEISDSTMKLGPKNLL 306 (393)
T ss_dssp GC------CCSSSCSEEEEET-------------TTTCEEEEECTTSEEEEEEC-----------------------CCS
T ss_pred ceeeeecccccccceeeeeec-------------CCCCEEEEEeCCCCEEEEECccCC----CCceEeeecCccccEEEc
Confidence 0113444555666542 235889999999999999987652 112223333333333
Q ss_pred ---------------EeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCCc
Q 022111 216 ---------------AWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN 280 (302)
Q Consensus 216 ---------------~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d~ 280 (302)
.|+|.. ++.++++|+.|++|+|||+..... ......+..+|.+++|||||++||+|++++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~sgs~Dg~V~lwd~~~~~~---~~~~~~~~~~V~svafspdG~~LA~as~~G 381 (393)
T 4gq1_A 307 PNVQGISLFPSLLGACPHPRY--MDYFATAHSQHGLIQLINTYEKDS---NSIPIQLGMPIVDFCWHQDGSHLAIATEGS 381 (393)
T ss_dssp CSEEEECSSCCSSCCEECSSC--TTEEEEEETTTTEEEEEETTCTTC---CEEEEECSSCEEEEEECTTSSEEEEEESSE
T ss_pred cccccccccCcceeEEEccCC--CCEEEEEECCCCEEEEEECCCCcE---EEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 344322 245788999999999999876432 123356778999999999999999999889
Q ss_pred eEEeeec
Q 022111 281 VTLWKEA 287 (302)
Q Consensus 281 i~~w~~~ 287 (302)
+.+|+..
T Consensus 382 v~lvrL~ 388 (393)
T 4gq1_A 382 VLLTRLM 388 (393)
T ss_dssp EEEEEEG
T ss_pred eEEEEEe
Confidence 9999864
No 70
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=4.2e-33 Score=242.37 Aligned_cols=253 Identities=15% Similarity=0.138 Sum_probs=201.0
Q ss_pred CCCcccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCC-ceEEEEecCcccCeEEEEeeCCCCCC-EEEEEeCC
Q 022111 1 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSA-SQHLATLKGHRGPVWQVAWAHPKFGS-ILASCSYD 78 (302)
Q Consensus 1 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~-~~~~~~~~~h~~~v~~v~~~~~~~~~-~l~s~s~D 78 (302)
|...++..+|.+.|++++|+|++++|++++.|+.|++|++.... ......+.+|...|.+++|+++ ++ +|++++.|
T Consensus 1 m~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d 78 (342)
T 1yfq_A 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDN--TDLQIYVGTVQ 78 (342)
T ss_dssp CEEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEES--SSEEEEEEETT
T ss_pred CcceecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCC--CCcEEEEEcCC
Confidence 44456677999999999999999999999999999999997643 1234455689999999999864 78 99999999
Q ss_pred CeEEEEEc-CCCCceeEEEEecC--CCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecC---------CCCeeeeeecc
Q 022111 79 GQVIIWKE-GNQNDWTQAHTFND--HKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA---------DGGWDTTRIDQ 146 (302)
Q Consensus 79 ~~i~iwd~-~~~~~~~~~~~~~~--h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~---------~~~~~~~~~~~ 146 (302)
+.|++||+ .... ...+.. |...|.+++|+| +..+++++.|+.|++||++. ... ...+
T Consensus 79 g~i~~wd~~~~~~----~~~~~~~~~~~~v~~l~~~~---~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~-- 147 (342)
T 1yfq_A 79 GEILKVDLIGSPS----FQALTNNEANLGICRICKYG---DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN--SNNT-- 147 (342)
T ss_dssp SCEEEECSSSSSS----EEECBSCCCCSCEEEEEEET---TTEEEEEETTSEEEEECHHHHTTBCEEEEESC--SSSS--
T ss_pred CeEEEEEeccCCc----eEeccccCCCCceEEEEeCC---CCEEEEEcCCCeEEEEcccccccccccccCCe--eeEE--
Confidence 99999998 7652 366778 999999999998 35899999999999999874 211 1122
Q ss_pred cCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEec-CccccccccccccCCCceeEEEeeC-CCCCC
Q 022111 147 AHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYN-GIWKMDCFPALQMHSDWVRSVAWAP-NLGLP 224 (302)
Q Consensus 147 ~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~-~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~ 224 (302)
.|...+.+++|+|+ .|++++.|+.|++||+++ .... .......|...|.+++|+| ++
T Consensus 148 ~~~~~v~~~~~~~~----------------~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~~~~i~~i~~~~~~~--- 206 (342)
T 1yfq_A 148 KVKNKIFTMDTNSS----------------RLIVGMNNSQVQWFRLPLCEDDN--GTIEESGLKYQIRDVALLPKEQ--- 206 (342)
T ss_dssp SSCCCEEEEEECSS----------------EEEEEESTTEEEEEESSCCTTCC--CEEEECSCSSCEEEEEECSGGG---
T ss_pred eeCCceEEEEecCC----------------cEEEEeCCCeEEEEECCcccccc--ceeeecCCCCceeEEEECCCCC---
Confidence 37778999999873 289999999999999987 4211 1123356888999999999 85
Q ss_pred ccEEEEEecCCeEEEEEeccC-----CcceeeeeeccC---------CCcEEEEEEccCCCEEEEecCC-ceEEeeecCC
Q 022111 225 KSTIASASQDGTVVIWTCAKE-----GEQWEGRVLKDF---------KTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVD 289 (302)
Q Consensus 225 ~~~l~s~s~D~~i~iwd~~~~-----~~~~~~~~~~~~---------~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~ 289 (302)
..|++++.|+.|++|+++.. ... ...+..+ ..+|.+++|+|++++|++++.| .|++|+....
T Consensus 207 -~~l~~~~~dg~i~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 207 -EGYACSSIDGRVAVEFFDDQGDDYNSSK--RFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp -CEEEEEETTSEEEEEECCTTCCSTTCTT--CEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred -CEEEEEecCCcEEEEEEcCCCccccccc--ceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccH
Confidence 78999999999999999764 111 1222333 3389999999999999999988 7999998643
Q ss_pred c
Q 022111 290 G 290 (302)
Q Consensus 290 ~ 290 (302)
.
T Consensus 284 ~ 284 (342)
T 1yfq_A 284 K 284 (342)
T ss_dssp E
T ss_pred h
Confidence 3
No 71
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2e-33 Score=249.01 Aligned_cols=244 Identities=17% Similarity=0.173 Sum_probs=185.5
Q ss_pred cccccceeEEEEcc-CCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEc
Q 022111 8 TGHEDTVHDVAMDF-YGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE 86 (302)
Q Consensus 8 ~~h~~~v~~~~~s~-~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~ 86 (302)
.+|...|.+++|+| ++++|++++.|++|++||+.......+....+|...|.+++|+++ +++|++++.|+.|++||+
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~d~ 192 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVS--RQMLATGDSTGRLLLLGL 192 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETT--TTEEEEEETTSEEEEEET
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCC--CCEEEEECCCCCEEEEEC
Confidence 37999999999999 679999999999999999975322222222345588999999874 789999999999999998
Q ss_pred CCCCceeEEEEecCCCCCeeEEEecCCCCCc-EEEEEecCCcEEEEEecCCCC-eeeeeecccCCCCeEEEEeCC-CCCC
Q 022111 87 GNQNDWTQAHTFNDHKSSVNSIAWAPHELGL-SLACGSSDGNISVFTATADGG-WDTTRIDQAHPVGVTSVSWAP-AMAP 163 (302)
Q Consensus 87 ~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~-~l~sg~~d~~v~~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~-~~~~ 163 (302)
+. .+...+..|...|.+++|+|+ +. ++++|+.|+.|++||++.... ....... .|...|.+++|+| +
T Consensus 193 ~~----~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~--- 262 (383)
T 3ei3_B 193 DG----HEIFKEKLHKAKVTHAEFNPR--CDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTD--- 262 (383)
T ss_dssp TS----CEEEEEECSSSCEEEEEECSS--CTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTT---
T ss_pred CC----CEEEEeccCCCcEEEEEECCC--CCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCC---
Confidence 43 366778889999999999998 44 899999999999999985321 1111222 5888999999998 5
Q ss_pred CceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccc-------cCCCc----------eeEEEeeCCCCCCcc
Q 022111 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQ-------MHSDW----------VRSVAWAPNLGLPKS 226 (302)
Q Consensus 164 ~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~-------~h~~~----------v~~v~~~p~~~~~~~ 226 (302)
+.+|++++.|+.|++||++++.. ...+. .|... +..++|+|++ .
T Consensus 263 -----------~~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg----~ 323 (383)
T 3ei3_B 263 -----------STKLLTTDQRNEIRVYSSYDWSK----PDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDD----Q 323 (383)
T ss_dssp -----------SCEEEEEESSSEEEEEETTBTTS----CSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCT----T
T ss_pred -----------CCEEEEEcCCCcEEEEECCCCcc----ccccccccccccccccceEEeccCCCCceEEEecCCc----c
Confidence 37899999999999999987532 22222 23333 3446666664 2
Q ss_pred EEEEEecCCeEEEEEeccCCcceeeeeecc--CCCcEEEEEEccCCCEEEEecCCceEEeeec
Q 022111 227 TIASASQDGTVVIWTCAKEGEQWEGRVLKD--FKTPVWSVSWSLTGNLLAVADANNVTLWKEA 287 (302)
Q Consensus 227 ~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~--~~~~v~~~~~spdg~~la~~~~d~i~~w~~~ 287 (302)
+ +++.|+.|+|||+.+... . ..+.. +...+..++|+|+|++|+++++..|++|+..
T Consensus 324 ~--s~s~d~~i~iwd~~~~~~--~-~~l~~~~~~~~~~~~~~s~~g~~l~s~sd~~i~iw~~~ 381 (383)
T 3ei3_B 324 L--LLNDKRTIDIYDANSGGL--V-HQLRDPNAAGIISLNKFSPTGDVLASGMGFNILIWNRE 381 (383)
T ss_dssp T--CTTCCCCEEEEETTTCCE--E-EEECBTTBCSCCCEEEECTTSSEEEEEETTEEEEEECC
T ss_pred c--ccCCCCeEEEEecCCCce--e-eeecCCCCCceEEEEEEecCccEEEEecCCcEEEEecC
Confidence 3 788999999999976432 1 22232 4556777899999999999974489999975
No 72
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-32 Score=233.99 Aligned_cols=246 Identities=17% Similarity=0.213 Sum_probs=198.2
Q ss_pred cccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEE
Q 022111 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83 (302)
Q Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~i 83 (302)
.+.+.+|.+.|++++| +++++|++++.|+.|++|++.. .+....+..|...|.+++|+++ +++|++++.|+.+++
T Consensus 11 ~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 11 SATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDD--QWLGTVVYTGQGFLNSVCYDSE--KELLLFGGKDTMING 85 (313)
T ss_dssp EEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESS--SEEEEEEEECSSCEEEEEEETT--TTEEEEEETTSCEEE
T ss_pred HHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCC--CEEEEEeecCCccEEEEEECCC--CCEEEEecCCCeEEE
Confidence 3457799999999999 8999999999999999999965 3456677889999999999874 789999999999999
Q ss_pred EEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCC
Q 022111 84 WKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAP 163 (302)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 163 (302)
|++...........+..|...|.+++|. +..+++++.|+.|++||. . .....+ ..|...+.++.|.|..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~d~~i~~~d~--~--~~~~~~-~~~~~~v~~~~~~~~~-- 154 (313)
T 3odt_A 86 VPLFATSGEDPLYTLIGHQGNVCSLSFQ----DGVVISGSWDKTAKVWKE--G--SLVYNL-QAHNASVWDAKVVSFS-- 154 (313)
T ss_dssp EETTCCTTSCC-CEECCCSSCEEEEEEE----TTEEEEEETTSEEEEEET--T--EEEEEE-ECCSSCEEEEEEEETT--
T ss_pred EEeeecCCCCcccchhhcccCEEEEEec----CCEEEEEeCCCCEEEEcC--C--cEEEec-ccCCCceeEEEEccCC--
Confidence 9987654444567788899999999994 348999999999999982 1 222333 3688899999998732
Q ss_pred CceeecccCCCceeEEEeeCCCcEEEEEEecCcccccccccccc-CCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEe
Q 022111 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQM-HSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242 (302)
Q Consensus 164 ~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~ 242 (302)
+..|++++.|+.|++||... ....+.. |...|.+++|+|++ . +++++.|+.|++||+
T Consensus 155 -----------~~~l~~~~~d~~i~i~d~~~------~~~~~~~~~~~~i~~~~~~~~~----~-~~~~~~dg~i~i~d~ 212 (313)
T 3odt_A 155 -----------ENKFLTASADKTIKLWQNDK------VIKTFSGIHNDVVRHLAVVDDG----H-FISCSNDGLIKLVDM 212 (313)
T ss_dssp -----------TTEEEEEETTSCEEEEETTE------EEEEECSSCSSCEEEEEEEETT----E-EEEEETTSEEEEEET
T ss_pred -----------CCEEEEEECCCCEEEEecCc------eEEEEeccCcccEEEEEEcCCC----e-EEEccCCCeEEEEEC
Confidence 47899999999999999332 2344555 89999999999985 4 999999999999999
Q ss_pred ccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCce
Q 022111 243 AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGE 291 (302)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~ 291 (302)
+.... ......+..+|.+++|+|+|. |++++.| .|++|+......
T Consensus 213 ~~~~~---~~~~~~~~~~i~~~~~~~~~~-l~~~~~dg~v~iwd~~~~~~ 258 (313)
T 3odt_A 213 HTGDV---LRTYEGHESFVYCIKLLPNGD-IVSCGEDRTVRIWSKENGSL 258 (313)
T ss_dssp TTCCE---EEEEECCSSCEEEEEECTTSC-EEEEETTSEEEEECTTTCCE
T ss_pred Cchhh---hhhhhcCCceEEEEEEecCCC-EEEEecCCEEEEEECCCCce
Confidence 76432 223456788999999999995 6677677 799999865443
No 73
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.6e-32 Score=247.79 Aligned_cols=249 Identities=25% Similarity=0.354 Sum_probs=197.2
Q ss_pred cccccccccce-eEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEE
Q 022111 4 QKIETGHEDTV-HDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVI 82 (302)
Q Consensus 4 ~~~~~~h~~~v-~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~ 82 (302)
...+.+|...| .++. +++++|++|+.|++|++||+.. .+.+..+.+|.+.|++++|+++ + +|++|+.|++|+
T Consensus 114 ~~~l~~h~~~v~~~~~--~~~~~l~sgs~dg~i~vwd~~~--~~~~~~~~~h~~~V~~l~~~~~--~-~l~s~s~dg~i~ 186 (464)
T 3v7d_B 114 RTTLRGHMTSVITCLQ--FEDNYVITGADDKMIRVYDSIN--KKFLLQLSGHDGGVWALKYAHG--G-ILVSGSTDRTVR 186 (464)
T ss_dssp EEEEECCSSSCEEEEE--EETTEEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEECST--T-EEEEEETTSCEE
T ss_pred eEEEcCCCCCcEEEEE--ECCCEEEEEcCCCcEEEEECCC--CcEEEEEeCCCcCEEEEEEcCC--C-EEEEEeCCCCEE
Confidence 34567898875 5444 4678999999999999999865 4577888999999999999753 3 999999999999
Q ss_pred EEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeee--------------------e
Q 022111 83 IWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDT--------------------T 142 (302)
Q Consensus 83 iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~--------------------~ 142 (302)
+||++++ .....+.+|...|.+++|+|..++.++++|+.|+.|++||+........ .
T Consensus 187 vwd~~~~---~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (464)
T 3v7d_B 187 VWDIKKG---CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFV 263 (464)
T ss_dssp EEETTTT---EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEE
T ss_pred EEECCCC---cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEE
Confidence 9999765 4677888999999999999654467999999999999999875432110 1
Q ss_pred eecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCC
Q 022111 143 RIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLG 222 (302)
Q Consensus 143 ~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 222 (302)
....+|...+.++.. ++..|++++.|+.|++||+.++ .++..+.+|...|.+++|+|++
T Consensus 264 ~~~~~~~~~v~~~~~----------------~~~~l~~~~~d~~i~vwd~~~~----~~~~~~~~~~~~v~~~~~~~~~- 322 (464)
T 3v7d_B 264 GVLRGHMASVRTVSG----------------HGNIVVSGSYDNTLIVWDVAQM----KCLYILSGHTDRIYSTIYDHER- 322 (464)
T ss_dssp EEECCCSSCEEEEEE----------------ETTEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEEETTT-
T ss_pred EEccCccceEEEEcC----------------CCCEEEEEeCCCeEEEEECCCC----cEEEEecCCCCCEEEEEEcCCC-
Confidence 111245555555432 2478999999999999999865 4556778999999999999985
Q ss_pred CCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCce
Q 022111 223 LPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGE 291 (302)
Q Consensus 223 ~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~ 291 (302)
..|++|+.|+.|++||++... ....+..|...|.+++|+ +++|++++.| .|++|+......
T Consensus 323 ---~~l~sg~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~ 384 (464)
T 3v7d_B 323 ---KRCISASMDTTIRIWDLENGE---LMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSR 384 (464)
T ss_dssp ---TEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCE
T ss_pred ---CEEEEEeCCCcEEEEECCCCc---EEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCce
Confidence 789999999999999997642 123346788899999997 5789999888 799999865443
No 74
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=8.9e-33 Score=237.19 Aligned_cols=224 Identities=24% Similarity=0.355 Sum_probs=176.3
Q ss_pred ccccccccceeEEEEccC--CCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEE
Q 022111 5 KIETGHEDTVHDVAMDFY--GKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVI 82 (302)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~--~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~ 82 (302)
.++.+|+++|++++|+++ +++||||+.|++|+|||+..+....+..+.+|...|.+++|+|+..+.+|++++.|++|+
T Consensus 47 ~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~ 126 (297)
T 2pm7_B 47 DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVS 126 (297)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred EEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEE
Confidence 356799999999999863 899999999999999999764434556778899999999998643478999999999999
Q ss_pred EEEcCCCCceeEEEEecCCCCCeeEEEecCCC-----------CCcEEEEEecCCcEEEEEecCCCC-eee-eeecccCC
Q 022111 83 IWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHE-----------LGLSLACGSSDGNISVFTATADGG-WDT-TRIDQAHP 149 (302)
Q Consensus 83 iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~-----------~~~~l~sg~~d~~v~~~~~~~~~~-~~~-~~~~~~h~ 149 (302)
+||++..... ....+.+|...|.+++|+|+. .+.+|++|+.|++|++||++.... +.. ..+ .+|.
T Consensus 127 ~wd~~~~~~~-~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l-~~H~ 204 (297)
T 2pm7_B 127 VVEFKENGTT-SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL-EGHS 204 (297)
T ss_dssp EEEBCSSSCB-CCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEE-CCCS
T ss_pred EEEecCCCce-eeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEe-cCCC
Confidence 9999764322 234567899999999999973 145899999999999999975432 112 233 3799
Q ss_pred CCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccc-cccccccCCCceeEEEeeCCCCCCccEE
Q 022111 150 VGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMD-CFPALQMHSDWVRSVAWAPNLGLPKSTI 228 (302)
Q Consensus 150 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~-~~~~~~~h~~~v~~v~~~p~~~~~~~~l 228 (302)
..|.+++|+|+.. .+.+|+|++.|++|+|||+.+...... ......+|...|.+++|+|++ ++|
T Consensus 205 ~~V~~v~~sp~~~-----------~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g----~~l 269 (297)
T 2pm7_B 205 DWVRDVAWSPTVL-----------LRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG----NVL 269 (297)
T ss_dssp SCEEEEEECCCCS-----------SSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSS----CCE
T ss_pred CceEEEEECCCCC-----------CceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCC----CEE
Confidence 9999999999631 137899999999999999976421100 111125688999999999995 779
Q ss_pred EEEecCCeEEEEEeccC
Q 022111 229 ASASQDGTVVIWTCAKE 245 (302)
Q Consensus 229 ~s~s~D~~i~iwd~~~~ 245 (302)
|+++.|++|+||+....
T Consensus 270 as~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 270 ALSGGDNKVTLWKENLE 286 (297)
T ss_dssp EEEETTSCEEEEEECTT
T ss_pred EEEcCCCcEEEEEECCC
Confidence 99999999999998643
No 75
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-32 Score=245.08 Aligned_cols=246 Identities=17% Similarity=0.287 Sum_probs=197.9
Q ss_pred ccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCC
Q 022111 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGN 88 (302)
Q Consensus 9 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~ 88 (302)
+|.+.|++++|+|++++|++++.|+.|++|+.. ...+..+.+|...|.+++|+++ +++|++++.|+.|++||+++
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~---~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~ 180 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWNKT---GALLNVLNFHRAPIVSVKWNKD--GTHIISMDVENVTILWNVIS 180 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEETT---SCEEEEECCCCSCEEEEEECTT--SSEEEEEETTCCEEEEETTT
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC---CCeeeeccCCCccEEEEEECCC--CCEEEEEecCCeEEEEECCC
Confidence 378899999999999999999999999999942 3466788899999999999864 78999999999999999865
Q ss_pred CCce-----------------------------------------------------eEEEEecCCCCCeeEEEecCCCC
Q 022111 89 QNDW-----------------------------------------------------TQAHTFNDHKSSVNSIAWAPHEL 115 (302)
Q Consensus 89 ~~~~-----------------------------------------------------~~~~~~~~h~~~i~~l~~~pd~~ 115 (302)
.... .....+..|...|.+++|+|+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~-- 258 (425)
T 1r5m_A 181 GTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDT-- 258 (425)
T ss_dssp TEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETT--
T ss_pred CcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCC--
Confidence 3210 112245578899999999998
Q ss_pred CcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecC
Q 022111 116 GLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNG 195 (302)
Q Consensus 116 ~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~ 195 (302)
+.+|++++.|+.|++||+...... ..+ ..|...+.++.|+|+ + .|++++.|+.|++||++++
T Consensus 259 ~~~l~~~~~d~~i~i~d~~~~~~~--~~~-~~~~~~i~~~~~~~~--------------~-~l~~~~~d~~i~i~d~~~~ 320 (425)
T 1r5m_A 259 NKLLLSASDDGTLRIWHGGNGNSQ--NCF-YGHSQSIVSASWVGD--------------D-KVISCSMDGSVRLWSLKQN 320 (425)
T ss_dssp TTEEEEEETTSCEEEECSSSBSCS--EEE-CCCSSCEEEEEEETT--------------T-EEEEEETTSEEEEEETTTT
T ss_pred CCEEEEEcCCCEEEEEECCCCccc--eEe-cCCCccEEEEEECCC--------------C-EEEEEeCCCcEEEEECCCC
Confidence 569999999999999998754322 233 368889999999985 3 8999999999999999875
Q ss_pred ccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcc-----------------eeeeeeccCC
Q 022111 196 IWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQ-----------------WEGRVLKDFK 258 (302)
Q Consensus 196 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~-----------------~~~~~~~~~~ 258 (302)
..+..+..|...|.+++|+|++ ..|++++.|+.|++||++..... ........+.
T Consensus 321 ----~~~~~~~~~~~~i~~~~~s~~~----~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (425)
T 1r5m_A 321 ----TLLALSIVDGVPIFAGRISQDG----QKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQ 392 (425)
T ss_dssp ----EEEEEEECTTCCEEEEEECTTS----SEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTT
T ss_pred ----cEeEecccCCccEEEEEEcCCC----CEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcc
Confidence 3455677899999999999985 78999999999999999753200 0112234554
Q ss_pred C--cEEEEEEccCCCEEEEecCC-ceEEeeec
Q 022111 259 T--PVWSVSWSLTGNLLAVADAN-NVTLWKEA 287 (302)
Q Consensus 259 ~--~v~~~~~spdg~~la~~~~d-~i~~w~~~ 287 (302)
. .|.+++|+|+|++|++++.| .|++|++.
T Consensus 393 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 393 DNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred cCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 4 89999999999999999888 69999964
No 76
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-34 Score=253.02 Aligned_cols=258 Identities=19% Similarity=0.345 Sum_probs=201.1
Q ss_pred ccccceeEEEEccCCC-EEEEe----------eCCCcEEEEeecCCCce-EEEEecCcccCeEEEEeeCCCCCCEEEEEe
Q 022111 9 GHEDTVHDVAMDFYGK-RLATA----------SSDSSIKIIGLSNSASQ-HLATLKGHRGPVWQVAWAHPKFGSILASCS 76 (302)
Q Consensus 9 ~h~~~v~~~~~s~~~~-~l~s~----------~~d~~v~lw~~~~~~~~-~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s 76 (302)
.+...|.+++|+|+++ +|++| +.|++|++|++...... .+.. ..|...|.+++|+++ +++|++++
T Consensus 10 ~~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~-~~~~~~v~~~~~s~~--~~~l~~~~ 86 (416)
T 2pm9_A 10 AEFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIAS-LQVDSKFNDLDWSHN--NKIIAGAL 86 (416)
T ss_dssp CEEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCC-CCCSSCEEEEEECSS--SSCEEEEE
T ss_pred hhhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEE-EecCCceEEEEECCC--CCeEEEEc
Confidence 3456788999999987 99999 89999999998654321 2333 368899999999864 78999999
Q ss_pred CCCeEEEEEcCCCCc-eeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCC------CeeeeeecccCC
Q 022111 77 YDGQVIIWKEGNQND-WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADG------GWDTTRIDQAHP 149 (302)
Q Consensus 77 ~D~~i~iwd~~~~~~-~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~------~~~~~~~~~~h~ 149 (302)
.|+.|++||+..... ......+.+|...|.+++|+|+. +.+|++++.|+.|++||+.... ..........|.
T Consensus 87 ~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 165 (416)
T 2pm9_A 87 DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQ-DNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSV 165 (416)
T ss_dssp SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSS-TTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSS
T ss_pred cCCeEEEeecccccccccchhhccCCccceEEEEEcCCC-CCEEEEEcCCCeEEEEECCCCccccccccccccccccCCC
Confidence 999999999876211 13667888999999999999973 4589999999999999987543 111111123688
Q ss_pred CCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcccccccccccc------CCCceeEEEeeCCCCC
Q 022111 150 VGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQM------HSDWVRSVAWAPNLGL 223 (302)
Q Consensus 150 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~------h~~~v~~v~~~p~~~~ 223 (302)
..+.+++|+|+. +.+|++++.|+.|++||++++. ....+.. |...|.+++|+|++
T Consensus 166 ~~v~~~~~~~~~-------------~~~l~~~~~dg~v~iwd~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~-- 226 (416)
T 2pm9_A 166 DEVISLAWNQSL-------------AHVFASAGSSNFASIWDLKAKK----EVIHLSYTSPNSGIKQQLSVVEWHPKN-- 226 (416)
T ss_dssp CCCCEEEECSSC-------------TTEEEEESSSSCEEEEETTTTE----EEEEECCCCCSSCCCCCEEEEEECSSC--
T ss_pred CCeeEEEeCCCC-------------CcEEEEEcCCCCEEEEECCCCC----cceEEeccccccccCCceEEEEECCCC--
Confidence 889999999863 3689999999999999998763 2233333 48899999999985
Q ss_pred CccEEEEEecCC---eEEEEEeccCCcceeeeeec-cCCCcEEEEEEcc-CCCEEEEecCC-ceEEeeecCCceE
Q 022111 224 PKSTIASASQDG---TVVIWTCAKEGEQWEGRVLK-DFKTPVWSVSWSL-TGNLLAVADAN-NVTLWKEAVDGEW 292 (302)
Q Consensus 224 ~~~~l~s~s~D~---~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~sp-dg~~la~~~~d-~i~~w~~~~~~~~ 292 (302)
...|++++.|+ .|++||++..... ..... .+...|.+++|+| ++++|++++.| .|++|+.......
T Consensus 227 -~~~l~~~~~d~~~~~i~~~d~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 227 -STRVATATGSDNDPSILIWDLRNANTP--LQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQL 298 (416)
T ss_dssp -TTEEEEEECCSSSCCCCEEETTSTTSC--SBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEE
T ss_pred -CCEEEEEECCCCCceEEEEeCCCCCCC--cEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccc
Confidence 36899999999 9999999864221 12334 6788999999999 99999999988 7999998654443
No 77
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4.8e-33 Score=247.03 Aligned_cols=251 Identities=18% Similarity=0.282 Sum_probs=199.2
Q ss_pred ccccccccceeEEEEccC----C---CEEEEeeCCCcEEEEeecCCCc---eEEEEecCc-----ccCeEEEEee----C
Q 022111 5 KIETGHEDTVHDVAMDFY----G---KRLATASSDSSIKIIGLSNSAS---QHLATLKGH-----RGPVWQVAWA----H 65 (302)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~----~---~~l~s~~~d~~v~lw~~~~~~~---~~~~~~~~h-----~~~v~~v~~~----~ 65 (302)
..+.+|...|++++|+++ + ++|++++.|++|++|++..... ..+..+.+| ...|.+++|+ +
T Consensus 56 ~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 135 (397)
T 1sq9_A 56 YSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR 135 (397)
T ss_dssp EEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC--
T ss_pred eEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCC
Confidence 345689999999999999 9 9999999999999999865431 115667788 5899999998 5
Q ss_pred CCCCCE-EEEEeCCCeEEEEEcCC------CCce--eEEEEe-------cCCCCCeeEEEecCCCCCcEEEEEecCCcEE
Q 022111 66 PKFGSI-LASCSYDGQVIIWKEGN------QNDW--TQAHTF-------NDHKSSVNSIAWAPHELGLSLACGSSDGNIS 129 (302)
Q Consensus 66 ~~~~~~-l~s~s~D~~i~iwd~~~------~~~~--~~~~~~-------~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~ 129 (302)
+ +++ |++++.|+.|++||++. .... .+...+ ..|...|.+++|+|+ + .+++++.|+.|+
T Consensus 136 ~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~-~l~~~~~dg~i~ 210 (397)
T 1sq9_A 136 L--LSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER--G-LIATGFNNGTVQ 210 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTT--S-EEEEECTTSEEE
T ss_pred C--CceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCC--c-eEEEEeCCCcEE
Confidence 3 788 99999999999999976 3221 111144 458899999999998 6 899999999999
Q ss_pred EEEecCCCCeeeeeeccc---C---CCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCC---CcEEEEEEecCccccc
Q 022111 130 VFTATADGGWDTTRIDQA---H---PVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD---NTVKVWKMYNGIWKMD 200 (302)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~---h---~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D---~~v~iwd~~~~~~~~~ 200 (302)
+||++... ....+. . | ...+.+++|+|++ .+|++++.| +.|++||++++ .
T Consensus 211 i~d~~~~~--~~~~~~-~~~~h~~~~~~i~~i~~~~~~--------------~~l~~~~~d~~~g~i~i~d~~~~----~ 269 (397)
T 1sq9_A 211 ISELSTLR--PLYNFE-SQHSMINNSNSIRSVKFSPQG--------------SLLAIAHDSNSFGCITLYETEFG----E 269 (397)
T ss_dssp EEETTTTE--EEEEEE-CCC---CCCCCEEEEEECSST--------------TEEEEEEEETTEEEEEEEETTTC----C
T ss_pred EEECCCCc--eeEEEe-ccccccccCCccceEEECCCC--------------CEEEEEecCCCCceEEEEECCCC----c
Confidence 99987542 223332 4 7 8889999999863 789999999 99999999875 3
Q ss_pred ccccccc-------------CCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeec------cC----
Q 022111 201 CFPALQM-------------HSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLK------DF---- 257 (302)
Q Consensus 201 ~~~~~~~-------------h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~------~~---- 257 (302)
.+..+.+ |...|.+++|+|++ .+|++++.|+.|++||++..... .... .+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~ 342 (397)
T 1sq9_A 270 RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG----ETLCSAGWDGKLRFWDVKTKERI---TTLNMHCDDIEIEEDI 342 (397)
T ss_dssp EEEEECBC--------CCBSBSSCEEEEEECSSS----SEEEEEETTSEEEEEETTTTEEE---EEEECCGGGCSSGGGC
T ss_pred ccceeccCcccccccccccccCCcEEEEEECCCC----CEEEEEeCCCeEEEEEcCCCcee---EEEecccCcccchhhh
Confidence 3455666 99999999999985 78999999999999999764221 2223 45
Q ss_pred -----------CCcEEEEEEccCC----------CEEEEecCC-ceEEeeecC
Q 022111 258 -----------KTPVWSVSWSLTG----------NLLAVADAN-NVTLWKEAV 288 (302)
Q Consensus 258 -----------~~~v~~~~~spdg----------~~la~~~~d-~i~~w~~~~ 288 (302)
..+|.+++|+|+| ++|++++.| .|++|+...
T Consensus 343 ~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 343 LAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp CCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred hccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 7889999999998 799999888 799999753
No 78
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.8e-34 Score=255.88 Aligned_cols=259 Identities=14% Similarity=0.116 Sum_probs=191.7
Q ss_pred cccccceeEEEEcc-CCCEEEEeeCCCcEEEEeecC---CC-ceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEE
Q 022111 8 TGHEDTVHDVAMDF-YGKRLATASSDSSIKIIGLSN---SA-SQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVI 82 (302)
Q Consensus 8 ~~h~~~v~~~~~s~-~~~~l~s~~~d~~v~lw~~~~---~~-~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~ 82 (302)
.+|.+.|++++|+| ++++||+|+.|++|+|||+.. .. ......+ +|.+.|.+++|+++ +++|++|+.|++|+
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~--~~~l~s~s~dg~i~ 136 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPN--FDAFAVSSKDGQII 136 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTT--SSEEEEEETTSEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCC--CCEEEEEeCCCEEE
Confidence 78999999999999 999999999999999999854 22 1122333 59999999999863 78999999999999
Q ss_pred EEEcC---CCCce-----eEEEEe--cC--CCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecc-cCC
Q 022111 83 IWKEG---NQNDW-----TQAHTF--ND--HKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQ-AHP 149 (302)
Q Consensus 83 iwd~~---~~~~~-----~~~~~~--~~--h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~-~h~ 149 (302)
+||++ .+... ..+..+ .. +...+.++.+.....+.+|++|+.|+.|++||++..... ..+.. .|.
T Consensus 137 vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~~~h~ 214 (437)
T 3gre_A 137 VLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERL--QIIENSPRH 214 (437)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEE--EEEECCGGG
T ss_pred EEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeee--EEEccCCCC
Confidence 99984 22110 111111 12 556777777432223679999999999999999764332 23321 277
Q ss_pred CCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccc-cCCCceeEEEeeCCCCCCccEE
Q 022111 150 VGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQ-MHSDWVRSVAWAPNLGLPKSTI 228 (302)
Q Consensus 150 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~~~~l 228 (302)
..|++++|+|++ .+|++|+.|+.|++||++++ .++..+. +|...|.+++|+|....++..|
T Consensus 215 ~~v~~~~~s~~~--------------~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l 276 (437)
T 3gre_A 215 GAVSSICIDEEC--------------CVLILGTTRGIIDIWDIRFN----VLIRSWSFGDHAPITHVEVCQFYGKNSVIV 276 (437)
T ss_dssp CCEEEEEECTTS--------------CEEEEEETTSCEEEEETTTT----EEEEEEBCTTCEEEEEEEECTTTCTTEEEE
T ss_pred CceEEEEECCCC--------------CEEEEEcCCCeEEEEEcCCc----cEEEEEecCCCCceEEEEeccccCCCccEE
Confidence 899999999863 78999999999999999875 3444444 6888999998887644446799
Q ss_pred EEEecCCeEEEEEeccCCcceeee---------------------eecc--CCCcEEEEEEccCCCEEEEecCC-ceEEe
Q 022111 229 ASASQDGTVVIWTCAKEGEQWEGR---------------------VLKD--FKTPVWSVSWSLTGNLLAVADAN-NVTLW 284 (302)
Q Consensus 229 ~s~s~D~~i~iwd~~~~~~~~~~~---------------------~~~~--~~~~v~~~~~spdg~~la~~~~d-~i~~w 284 (302)
++|+.|+.|++||++......... ...+ +...|++++|+ ++++|++++.| .|++|
T Consensus 277 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~w 355 (437)
T 3gre_A 277 VGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMF 355 (437)
T ss_dssp EEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEE
T ss_pred EEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEE
Confidence 999999999999997532110000 0011 55679999999 78999999988 79999
Q ss_pred eecCCc
Q 022111 285 KEAVDG 290 (302)
Q Consensus 285 ~~~~~~ 290 (302)
+.....
T Consensus 356 d~~~~~ 361 (437)
T 3gre_A 356 SLNELS 361 (437)
T ss_dssp ETTCGG
T ss_pred ECCCcc
Confidence 986543
No 79
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.2e-33 Score=244.04 Aligned_cols=258 Identities=17% Similarity=0.317 Sum_probs=195.5
Q ss_pred cccccccceeEEEEccC----CCEEEEeeCCCcEEEEeecCCCc-eEEEEe--cCcccCeEEEEeeCCCC--CCEEEEEe
Q 022111 6 IETGHEDTVHDVAMDFY----GKRLATASSDSSIKIIGLSNSAS-QHLATL--KGHRGPVWQVAWAHPKF--GSILASCS 76 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~----~~~l~s~~~d~~v~lw~~~~~~~-~~~~~~--~~h~~~v~~v~~~~~~~--~~~l~s~s 76 (302)
+..+|...|++++|+|+ ...+++++.++.|++|++..... ..+... ..|...|++++|+++.. +++|++|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 34589999999999984 45666667777999999864321 222222 13668899999987532 56999999
Q ss_pred CCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeee--cccCCCCeEE
Q 022111 77 YDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRI--DQAHPVGVTS 154 (302)
Q Consensus 77 ~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~--~~~h~~~v~~ 154 (302)
.|+.|++||+.+. .....+.+|...|.+++|+|+. +.+|++|+.|+.|++||+..... ...+ ...|...|.+
T Consensus 93 ~dg~i~v~d~~~~---~~~~~~~~~~~~i~~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~v~~ 166 (366)
T 3k26_A 93 SRGIIRIINPITM---QCIKHYVGHGNAINELKFHPRD-PNLLLSVSKDHALRLWNIQTDTL--VAIFGGVEGHRDEVLS 166 (366)
T ss_dssp TTCEEEEECTTTC---CEEEEEESCCSCEEEEEECSSC-TTEEEEEETTSCEEEEETTTTEE--EEEECSTTSCSSCEEE
T ss_pred CCCEEEEEEchhc---eEeeeecCCCCcEEEEEECCCC-CCEEEEEeCCCeEEEEEeecCeE--EEEecccccccCceeE
Confidence 9999999998765 3567788899999999999932 56899999999999999875422 2222 1368899999
Q ss_pred EEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccc------------------------cccccccCCC
Q 022111 155 VSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMD------------------------CFPALQMHSD 210 (302)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~------------------------~~~~~~~h~~ 210 (302)
++|+|++ .+|++++.|+.|++||++++..... ......+|..
T Consensus 167 ~~~~~~~--------------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (366)
T 3k26_A 167 ADYDLLG--------------EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRN 232 (366)
T ss_dssp EEECTTS--------------SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSS
T ss_pred EEECCCC--------------CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcc
Confidence 9999863 7899999999999999976421100 0112234999
Q ss_pred ceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcc-----------eeeeeeccCCCcEEEEEEccC--CCEEEEec
Q 022111 211 WVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQ-----------WEGRVLKDFKTPVWSVSWSLT--GNLLAVAD 277 (302)
Q Consensus 211 ~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~-----------~~~~~~~~~~~~v~~~~~spd--g~~la~~~ 277 (302)
.|.+++|++ +.|++++.|+.|++||++..... ........+...|++++|+|+ |++|++++
T Consensus 233 ~v~~~~~~~------~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~ 306 (366)
T 3k26_A 233 YVDCVRWLG------DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGN 306 (366)
T ss_dssp CCCEEEEET------TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEEC
T ss_pred eEEEEEEcC------CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEe
Confidence 999999983 57999999999999998764220 011223456678999999999 99999999
Q ss_pred CC-ceEEeeecCC
Q 022111 278 AN-NVTLWKEAVD 289 (302)
Q Consensus 278 ~d-~i~~w~~~~~ 289 (302)
.| .|++|+....
T Consensus 307 ~dg~i~vwd~~~~ 319 (366)
T 3k26_A 307 QVGKLYVWDLEVE 319 (366)
T ss_dssp TTSCEEEEECCSS
T ss_pred cCCcEEEEECCCC
Confidence 88 7999998653
No 80
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.3e-32 Score=277.42 Aligned_cols=251 Identities=21% Similarity=0.357 Sum_probs=208.3
Q ss_pred cccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
++.+|.+.|++++|+|++++||+|+.|++|++||+.+ .+.+..+.+|.+.|.+++|+++ +++|++++.|++|++||
T Consensus 610 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~--~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~~~d~~v~vwd 685 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAET--GEKLLDIKAHEDEVLCCAFSSD--DSYIATCSADKKVKIWD 685 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT--CCEEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEE
T ss_pred EEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCC--CCEEEEeccCCCCEEEEEEecC--CCEEEEEeCCCeEEEEE
Confidence 4568999999999999999999999999999999865 3467788999999999999864 89999999999999999
Q ss_pred cCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCc
Q 022111 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 165 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 165 (302)
+.++ ..+..+.+|...|.+++|+|+..+..+++|+.|+.|++||+.+... ...+ .+|...|.+++|+|++
T Consensus 686 ~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~--~~~~-~~h~~~v~~~~~sp~~---- 755 (1249)
T 3sfz_A 686 SATG---KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC--RNTM-FGHTNSVNHCRFSPDD---- 755 (1249)
T ss_dssp TTTC---CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE--EEEE-CCCSSCEEEEEECSST----
T ss_pred CCCC---ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch--hhee-cCCCCCEEEEEEecCC----
Confidence 9876 3677888999999999999975567899999999999999875432 2333 3789999999999864
Q ss_pred eeecccCCCceeEEEeeCCCcEEEEEEecCccccc---------------------------------------------
Q 022111 166 LVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMD--------------------------------------------- 200 (302)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~--------------------------------------------- 200 (302)
..|++++.|++|++||+.++.....
T Consensus 756 ----------~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d 825 (1249)
T 3sfz_A 756 ----------ELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFD 825 (1249)
T ss_dssp ----------TEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEE
T ss_pred ----------CEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEE
Confidence 6899999999999999765421000
Q ss_pred -----cccc-cccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEE
Q 022111 201 -----CFPA-LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLA 274 (302)
Q Consensus 201 -----~~~~-~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la 274 (302)
.... ..+|...|.+++|+|++ ..+++++.|+.|++||+.... ......+|...|.+++|+|+|++|+
T Consensus 826 ~~~~~~~~~~~~~~~~~v~~~~~sp~~----~~l~~~~~dg~v~vwd~~~~~---~~~~~~~h~~~v~~v~~spdg~~l~ 898 (1249)
T 3sfz_A 826 IHTSGLLAEIHTGHHSTIQYCDFSPYD----HLAVIALSQYCVELWNIDSRL---KVADCRGHLSWVHGVMFSPDGSSFL 898 (1249)
T ss_dssp TTTCCEEEEEECSSSSCCCEEEECSST----TEEEEECSSSCEEEEETTTTE---EEEEECCCSSCEEEEEECTTSSEEE
T ss_pred ecCCCceeEEcCCCCCceEEEEEcCCC----CEEEEEeCCCeEEEEEcCCCc---eeeecCCCccceEEEEECCCCCEEE
Confidence 0001 12788899999999985 789999999999999997542 1233467888999999999999999
Q ss_pred EecCC-ceEEeeec
Q 022111 275 VADAN-NVTLWKEA 287 (302)
Q Consensus 275 ~~~~d-~i~~w~~~ 287 (302)
+++.| .|++|+..
T Consensus 899 s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 899 TASDDQTIRVWETK 912 (1249)
T ss_dssp EEETTSCEEEEEHH
T ss_pred EEeCCCeEEEEEcc
Confidence 99998 79999953
No 81
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=7.4e-33 Score=241.86 Aligned_cols=259 Identities=16% Similarity=0.205 Sum_probs=193.5
Q ss_pred cccccccceeEEEEccCCCEE-EEeeC---CCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCC-CCCEEEEEeCCCe
Q 022111 6 IETGHEDTVHDVAMDFYGKRL-ATASS---DSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK-FGSILASCSYDGQ 80 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~~~l-~s~~~---d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~~~l~s~s~D~~ 80 (302)
++.+|...|++++|+|++..+ ++|+. |++|++|++......... ..+|...|.+++|+++. ++++|++++.|+.
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLR-EIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEE-EEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCccccee-eecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 356799999999999999655 55655 999999999765433332 33799999999998641 1689999999999
Q ss_pred EEEEEcCCCCceeEEEEecCCCCCeeEEEe------cCCCCCcEEEEEecCCcEEEEEecCCC-Ceeeeeeccc-CCCCe
Q 022111 81 VIIWKEGNQNDWTQAHTFNDHKSSVNSIAW------APHELGLSLACGSSDGNISVFTATADG-GWDTTRIDQA-HPVGV 152 (302)
Q Consensus 81 i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~------~pd~~~~~l~sg~~d~~v~~~~~~~~~-~~~~~~~~~~-h~~~v 152 (302)
|++||+.+.. .....+.+|...|.+++| +|+ +.+|++++.|+.|++||+.... .......... +...+
T Consensus 92 i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~s~~--~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v 167 (357)
T 3i2n_A 92 LHIWNLEAPE--MPVYSVKGHKEIINAIDGIGGLGIGEG--APEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDC 167 (357)
T ss_dssp EEEECTTSCS--SCSEEECCCSSCEEEEEEESGGGCC-C--CCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCE
T ss_pred EEEEeCCCCC--ccEEEEEecccceEEEeeccccccCCC--ccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCce
Confidence 9999997653 245678889999999966 455 6689999999999999987643 2221111111 23378
Q ss_pred EEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeC---CCCCCccEEE
Q 022111 153 TSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAP---NLGLPKSTIA 229 (302)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p---~~~~~~~~l~ 229 (302)
.++.|.+.. .+++..|++++.|+.|++||++++.. .....|...|.+++|+| ++ ..|+
T Consensus 168 ~~~~~~~~~----------~~~~~~l~~~~~d~~i~i~d~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~----~~l~ 228 (357)
T 3i2n_A 168 WTVAFGNAY----------NQEERVVCAGYDNGDIKLFDLRNMAL-----RWETNIKNGVCSLEFDRKDISM----NKLV 228 (357)
T ss_dssp EEEEEECCC----------C-CCCEEEEEETTSEEEEEETTTTEE-----EEEEECSSCEEEEEESCSSSSC----CEEE
T ss_pred EEEEEEecc----------CCCCCEEEEEccCCeEEEEECccCce-----eeecCCCCceEEEEcCCCCCCC----CEEE
Confidence 888853321 11357899999999999999987631 23356889999999999 64 7899
Q ss_pred EEecCCeEEEEEeccCCcceee--eeeccCCCcEEEEEEccCCC-EEEEecCC-ceEEeeecC
Q 022111 230 SASQDGTVVIWTCAKEGEQWEG--RVLKDFKTPVWSVSWSLTGN-LLAVADAN-NVTLWKEAV 288 (302)
Q Consensus 230 s~s~D~~i~iwd~~~~~~~~~~--~~~~~~~~~v~~~~~spdg~-~la~~~~d-~i~~w~~~~ 288 (302)
+++.|+.|++||++........ .....+...|.+++|+|+++ +|++++.| .|++|+...
T Consensus 229 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 229 ATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp EEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEEC
T ss_pred EECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCC
Confidence 9999999999999763221111 11236788999999999998 88999888 799999854
No 82
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-32 Score=241.39 Aligned_cols=259 Identities=19% Similarity=0.302 Sum_probs=190.2
Q ss_pred ccccceeEEEEccCCC-EEEEeeCCCcEEEEee----cCCCc----eEEEEecC----------cccCeEEEEeeCCCCC
Q 022111 9 GHEDTVHDVAMDFYGK-RLATASSDSSIKIIGL----SNSAS----QHLATLKG----------HRGPVWQVAWAHPKFG 69 (302)
Q Consensus 9 ~h~~~v~~~~~s~~~~-~l~s~~~d~~v~lw~~----~~~~~----~~~~~~~~----------h~~~v~~v~~~~~~~~ 69 (302)
.|.+.|++++|+|+++ +||+|+.|+.|++|++ ..... .....+.. |.+.|++++|+++ +
T Consensus 43 ~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~ 120 (425)
T 1r5m_A 43 VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHD--G 120 (425)
T ss_dssp EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTT--S
T ss_pred eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCC--C
Confidence 4568999999999999 9999999999999999 55331 02233333 6889999999864 8
Q ss_pred CEEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCC
Q 022111 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHP 149 (302)
Q Consensus 70 ~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~ 149 (302)
++|++++.|+.|++||... .....+..|...|.+++|+|+ +.+|++++.|+.|++|++...... ..+. .+.
T Consensus 121 ~~l~~~~~dg~i~i~~~~~----~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~--~~~~-~~~ 191 (425)
T 1r5m_A 121 NSIVTGVENGELRLWNKTG----ALLNVLNFHRAPIVSVKWNKD--GTHIISMDVENVTILWNVISGTVM--QHFE-LKE 191 (425)
T ss_dssp SEEEEEETTSCEEEEETTS----CEEEEECCCCSCEEEEEECTT--SSEEEEEETTCCEEEEETTTTEEE--EEEC-CC-
T ss_pred CEEEEEeCCCeEEEEeCCC----CeeeeccCCCccEEEEEECCC--CCEEEEEecCCeEEEEECCCCcEE--EEee-ccc
Confidence 9999999999999999432 356778889999999999998 668999999999999998643211 1111 111
Q ss_pred CC---------------eEEEEeCCCCC---------------------------CCceeecccCCCceeEEEeeCCCcE
Q 022111 150 VG---------------VTSVSWAPAMA---------------------------PGALVGLGLLDPVQKLASCGCDNTV 187 (302)
Q Consensus 150 ~~---------------v~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~l~s~~~D~~v 187 (302)
.. +.++.|+|+.. ...+..+...+++..|++++.|+.|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i 271 (425)
T 1r5m_A 192 TGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTL 271 (425)
T ss_dssp --------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred cCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEE
Confidence 11 33333333210 0011111222345789999999999
Q ss_pred EEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEc
Q 022111 188 KVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWS 267 (302)
Q Consensus 188 ~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s 267 (302)
++||+.++ .....+.+|...|.+++|+|++ .|++++.|+.|++||++.... ......+..+|.+++|+
T Consensus 272 ~i~d~~~~----~~~~~~~~~~~~i~~~~~~~~~-----~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~i~~~~~s 339 (425)
T 1r5m_A 272 RIWHGGNG----NSQNCFYGHSQSIVSASWVGDD-----KVISCSMDGSVRLWSLKQNTL---LALSIVDGVPIFAGRIS 339 (425)
T ss_dssp EEECSSSB----SCSEEECCCSSCEEEEEEETTT-----EEEEEETTSEEEEEETTTTEE---EEEEECTTCCEEEEEEC
T ss_pred EEEECCCC----ccceEecCCCccEEEEEECCCC-----EEEEEeCCCcEEEEECCCCcE---eEecccCCccEEEEEEc
Confidence 99999875 3455667899999999999983 799999999999999975421 22335667889999999
Q ss_pred cCCCEEEEecCC-ceEEeeecCCc
Q 022111 268 LTGNLLAVADAN-NVTLWKEAVDG 290 (302)
Q Consensus 268 pdg~~la~~~~d-~i~~w~~~~~~ 290 (302)
|+|++|++++.| .|++|+.....
T Consensus 340 ~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 340 QDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp TTSSEEEEEETTSCEEEEECHHHH
T ss_pred CCCCEEEEEECCCeEEEEECCCCc
Confidence 999999999988 79999985433
No 83
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.4e-32 Score=230.94 Aligned_cols=241 Identities=21% Similarity=0.316 Sum_probs=195.9
Q ss_pred cccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCC-ceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEE
Q 022111 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSA-SQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIW 84 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~-~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iw 84 (302)
....|...|.+++|+|++++|++++.|+.|++|++.... .+.+..+.+|...|.+++|. +++|++++.|+.|++|
T Consensus 54 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~d~~i~~~ 129 (313)
T 3odt_A 54 VVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ----DGVVISGSWDKTAKVW 129 (313)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE----TTEEEEEETTSEEEEE
T ss_pred EeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec----CCEEEEEeCCCCEEEE
Confidence 355789999999999999999999999999999985432 34566788999999999993 5799999999999999
Q ss_pred EcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCC
Q 022111 85 KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPG 164 (302)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 164 (302)
|. . .....+..|...|.++.|.|.. +..+++++.|+.|++||.. .....+...|...+.+++|+|++
T Consensus 130 d~--~---~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~i~i~d~~----~~~~~~~~~~~~~i~~~~~~~~~--- 196 (313)
T 3odt_A 130 KE--G---SLVYNLQAHNASVWDAKVVSFS-ENKFLTASADKTIKLWQND----KVIKTFSGIHNDVVRHLAVVDDG--- 196 (313)
T ss_dssp ET--T---EEEEEEECCSSCEEEEEEEETT-TTEEEEEETTSCEEEEETT----EEEEEECSSCSSCEEEEEEEETT---
T ss_pred cC--C---cEEEecccCCCceeEEEEccCC-CCEEEEEECCCCEEEEecC----ceEEEEeccCcccEEEEEEcCCC---
Confidence 92 2 3566778899999999998832 5689999999999999933 22234443488899999999863
Q ss_pred ceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEecc
Q 022111 165 ALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAK 244 (302)
Q Consensus 165 ~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~ 244 (302)
. |++++.|+.|++||++++ ..+..+.+|...|.+++|+|++ .|++++.|+.|++||++.
T Consensus 197 -----------~-~~~~~~dg~i~i~d~~~~----~~~~~~~~~~~~i~~~~~~~~~-----~l~~~~~dg~v~iwd~~~ 255 (313)
T 3odt_A 197 -----------H-FISCSNDGLIKLVDMHTG----DVLRTYEGHESFVYCIKLLPNG-----DIVSCGEDRTVRIWSKEN 255 (313)
T ss_dssp -----------E-EEEEETTSEEEEEETTTC----CEEEEEECCSSCEEEEEECTTS-----CEEEEETTSEEEEECTTT
T ss_pred -----------e-EEEccCCCeEEEEECCch----hhhhhhhcCCceEEEEEEecCC-----CEEEEecCCEEEEEECCC
Confidence 4 999999999999999876 3456678899999999999984 499999999999999876
Q ss_pred CCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecC
Q 022111 245 EGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAV 288 (302)
Q Consensus 245 ~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~ 288 (302)
... ......+..+|.+++|+|+|++++ ++.| .|++|+...
T Consensus 256 ~~~---~~~~~~~~~~i~~~~~~~~~~~~~-~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 256 GSL---KQVITLPAISIWSVDCMSNGDIIV-GSSDNLVRIFSQEK 296 (313)
T ss_dssp CCE---EEEEECSSSCEEEEEECTTSCEEE-EETTSCEEEEESCG
T ss_pred Cce---eEEEeccCceEEEEEEccCCCEEE-EeCCCcEEEEeCCC
Confidence 432 233356677899999999999665 5556 899999864
No 84
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.1e-31 Score=243.70 Aligned_cols=246 Identities=18% Similarity=0.285 Sum_probs=200.7
Q ss_pred cccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
.+.+|...|++++|++++ +|++|+.|++|++||+.. .+.+..+.+|...|.+++|++..++++|++++.|++|++||
T Consensus 157 ~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~--~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd 233 (464)
T 3v7d_B 157 QLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK--GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 233 (464)
T ss_dssp EECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEE
T ss_pred EEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCC--CcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEee
Confidence 356899999999999988 999999999999999865 45677889999999999998644578999999999999999
Q ss_pred cCCCCcee--------------------EEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeec
Q 022111 86 EGNQNDWT--------------------QAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRID 145 (302)
Q Consensus 86 ~~~~~~~~--------------------~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~ 145 (302)
++...... ....+.+|...|.++.. + +.++++|+.|+.|++||+.+.. ....+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~--~~~l~~~~~d~~i~vwd~~~~~--~~~~~- 306 (464)
T 3v7d_B 234 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG--H--GNIVVSGSYDNTLIVWDVAQMK--CLYIL- 306 (464)
T ss_dssp CCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEE--E--TTEEEEEETTSCEEEEETTTTE--EEEEE-
T ss_pred CCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcC--C--CCEEEEEeCCCeEEEEECCCCc--EEEEe-
Confidence 87643211 24567789999998854 4 4589999999999999987542 22333
Q ss_pred ccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCc
Q 022111 146 QAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPK 225 (302)
Q Consensus 146 ~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~ 225 (302)
.+|...|.++.|+|++ ..|++|+.|+.|++||+.++ .++..+.+|...|.+++|++
T Consensus 307 ~~~~~~v~~~~~~~~~--------------~~l~sg~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~~~~~~------ 362 (464)
T 3v7d_B 307 SGHTDRIYSTIYDHER--------------KRCISASMDTTIRIWDLENG----ELMYTLQGHTALVGLLRLSD------ 362 (464)
T ss_dssp CCCSSCEEEEEEETTT--------------TEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEECS------
T ss_pred cCCCCCEEEEEEcCCC--------------CEEEEEeCCCcEEEEECCCC----cEEEEEeCCCCcEEEEEEcC------
Confidence 3788999999999864 78999999999999999876 45667889999999999984
Q ss_pred cEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCCceEEeeecCC
Q 022111 226 STIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVD 289 (302)
Q Consensus 226 ~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d~i~~w~~~~~ 289 (302)
..|++++.|++|++||++.... .....+...+..++|+|++++|++++++.|++|+....
T Consensus 363 ~~l~s~s~dg~v~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g 422 (464)
T 3v7d_B 363 KFLVSAAADGSIRGWDANDYSR----KFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSG 422 (464)
T ss_dssp SEEEEEETTSEEEEEETTTCCE----EEEEECTTCCCEEEEEECSSEEEEEETTEEEEEETTTC
T ss_pred CEEEEEeCCCcEEEEECCCCce----eeeecCCCCccEEEEEeCCCEEEEecCCeEEEEECCCC
Confidence 5799999999999999976432 12223456678899999999999998558999998643
No 85
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.5e-32 Score=247.67 Aligned_cols=247 Identities=14% Similarity=0.217 Sum_probs=186.0
Q ss_pred cceeEEEEccCC--CEEEEeeCCCcEEEEeecCCCce-------------------------------------EEEE-e
Q 022111 12 DTVHDVAMDFYG--KRLATASSDSSIKIIGLSNSASQ-------------------------------------HLAT-L 51 (302)
Q Consensus 12 ~~v~~~~~s~~~--~~l~s~~~d~~v~lw~~~~~~~~-------------------------------------~~~~-~ 51 (302)
..|++++|+|++ .+|++++.|++|++|++...... +... +
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 889999999998 79999999999999998542110 0112 3
Q ss_pred cCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEE-------EecCCCCCeeEEEecCCCCCcEEEEEec
Q 022111 52 KGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAH-------TFNDHKSSVNSIAWAPHELGLSLACGSS 124 (302)
Q Consensus 52 ~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~-------~~~~h~~~i~~l~~~pd~~~~~l~sg~~ 124 (302)
.+|...|++++|+++ +++|++| .|++|++||++... .... .+.+|...|.+++|+|+. ..+|++|+.
T Consensus 174 ~~h~~~v~~~~~~~~--~~~l~s~-~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~~l~s~~~ 247 (447)
T 3dw8_B 174 NAHTYHINSISINSD--YETYLSA-DDLRINLWHLEITD--RSFNIVDIKPANMEELTEVITAAEFHPNS-CNTFVYSSS 247 (447)
T ss_dssp SCCSSCCCEEEECTT--SSEEEEE-CSSEEEEEETTEEE--EEEEEEECCCSSGGGCCCCEEEEEECSSC-TTEEEEEET
T ss_pred cCCCcceEEEEEcCC--CCEEEEe-CCCeEEEEECCCCC--ceeeeeecccccccccCcceEEEEECCCC-CcEEEEEeC
Confidence 689999999999864 8899998 89999999987422 2222 356799999999999983 268999999
Q ss_pred CCcEEEEEecCCCCee--eeeecccCCC------------CeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEE
Q 022111 125 DGNISVFTATADGGWD--TTRIDQAHPV------------GVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVW 190 (302)
Q Consensus 125 d~~v~~~~~~~~~~~~--~~~~~~~h~~------------~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iw 190 (302)
|+.|++||++...... ...+. .|.. .|.+++|+|+ +.+|++++. +.|+||
T Consensus 248 dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~--------------g~~l~~~~~-~~v~iw 311 (447)
T 3dw8_B 248 KGTIRLCDMRASALCDRHSKLFE-EPEDPSNRSFFSEIISSISDVKFSHS--------------GRYMMTRDY-LSVKVW 311 (447)
T ss_dssp TSCEEEEETTTCSSSCTTCEEEC-CC-----CCHHHHHTTCEEEEEECTT--------------SSEEEEEES-SEEEEE
T ss_pred CCeEEEEECcCCccccceeeEec-cCCCccccccccccCceEEEEEECCC--------------CCEEEEeeC-CeEEEE
Confidence 9999999987643211 12222 4543 8999999986 378999988 999999
Q ss_pred EEecCccccccccccccCCCc---------------eeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeee---
Q 022111 191 KMYNGIWKMDCFPALQMHSDW---------------VRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGR--- 252 (302)
Q Consensus 191 d~~~~~~~~~~~~~~~~h~~~---------------v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~--- 252 (302)
|++... .++..+.+|... +.+++|+|++ .+|++|+.|+.|++||+..........
T Consensus 312 d~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~----~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~ 384 (447)
T 3dw8_B 312 DLNMEN---RPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSD----SVVMTGSYNNFFRMFDRNTKRDITLEASRE 384 (447)
T ss_dssp ETTCCS---SCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTS----SEEEEECSTTEEEEEETTTCCEEEEECCST
T ss_pred eCCCCc---cccceeeccccccccccccccccccccceEEEECCCC----CEEEEeccCCEEEEEEcCCCcceeeeeccc
Confidence 997621 345566667532 2349999995 789999999999999987542110000
Q ss_pred --------------------------eeccCCCcEEEEEEccCCCEEEEecCCceEEeeec
Q 022111 253 --------------------------VLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEA 287 (302)
Q Consensus 253 --------------------------~~~~~~~~v~~~~~spdg~~la~~~~d~i~~w~~~ 287 (302)
...++...|..++|+|+|++||+++.+++.+|...
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~~~~ 445 (447)
T 3dw8_B 385 NNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQDK 445 (447)
T ss_dssp TCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEEECC
T ss_pred ccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecceeeeeccc
Confidence 01144567899999999999999999999999754
No 86
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.5e-31 Score=228.74 Aligned_cols=248 Identities=23% Similarity=0.380 Sum_probs=196.0
Q ss_pred cccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcC
Q 022111 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEG 87 (302)
Q Consensus 8 ~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~ 87 (302)
.+|...|++++|+|++++||+|+.|++|++|++.. .+.+..+.+|...+.++.+. +.++++++.++.+++|+..
T Consensus 64 ~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~--~~~~~~~~~h~~~~~~~~~~----~~~l~s~~~~~~~~~~~~~ 137 (318)
T 4ggc_A 64 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ--QKRLRNMTSHSARVGSLSWN----SYILSSGSRSGHIHHHDVR 137 (318)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEEE----TTEEEEEETTSEEEEEETT
T ss_pred cCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCC--ceeEEEecCccceEEEeecC----CCEEEEEecCCceEeeecC
Confidence 47888999999999999999999999999999865 46778889999999887764 5799999999999999986
Q ss_pred CCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCe-eeeeecccCCCCeEEEEeCCCCCCCce
Q 022111 88 NQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGW-DTTRIDQAHPVGVTSVSWAPAMAPGAL 166 (302)
Q Consensus 88 ~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~ 166 (302)
... .....+.+|...+..+.++++ +.++++++.|+.|++||+++.... ........|...|..+.++|...
T Consensus 138 ~~~--~~~~~~~~~~~~~~~~~~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---- 209 (318)
T 4ggc_A 138 VAE--HHVATLSGHSQEVCGLRWAPD--GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQS---- 209 (318)
T ss_dssp SSS--CEEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTST----
T ss_pred CCc--eeEEEEcCccCceEEEEEcCC--CCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCC----
Confidence 543 356677889999999999987 669999999999999998754321 11122235677889999988642
Q ss_pred eecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEE--EecCCeEEEEEecc
Q 022111 167 VGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIAS--ASQDGTVVIWTCAK 244 (302)
Q Consensus 167 ~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s--~s~D~~i~iwd~~~ 244 (302)
..-.+++++.+++|++||...... .....|...+..+.|+|++ ..+++ |+.|+.|+|||+++
T Consensus 210 -------~~~~~~~~~~~~~i~lwd~~~~~~-----~~~~~~~~~v~~~~~~~~~----~~~~~~sg~~d~~i~iwd~~~ 273 (318)
T 4ggc_A 210 -------NVLATGGGTSDRHIRIWNVCSGAC-----LSAVDAHSQVCSILWSPHY----KELISGHGFAQNQLVIWKYPT 273 (318)
T ss_dssp -------TEEEEEECTTTCEEEEEETTTCCE-----EEEEECSSCEEEEEEETTT----TEEEEEECTTTCCEEEEETTT
T ss_pred -------cEEEEEecCCCCEEEEEecccccc-----cccccceeeeeeeeecccc----cceEEEEEcCCCEEEEEECCC
Confidence 112356778899999999876421 2234567789999999985 44444 45899999999976
Q ss_pred CCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecC
Q 022111 245 EGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAV 288 (302)
Q Consensus 245 ~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~ 288 (302)
... ...+.+|..+|++++|+|||++|++|+.| .|+||+..+
T Consensus 274 ~~~---~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 274 MAK---VAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp CCE---EEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred CcE---EEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 432 23457888999999999999999999999 799999754
No 87
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4e-31 Score=236.06 Aligned_cols=242 Identities=22% Similarity=0.359 Sum_probs=189.7
Q ss_pred ccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEec-CcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcC
Q 022111 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLK-GHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEG 87 (302)
Q Consensus 9 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~-~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~ 87 (302)
+|.+.+...++++++..+++++.|+.|++|++..+.. ...+. .|...|.+++|+++ +++|++|+.|+.|++||+.
T Consensus 89 ~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~--~~~~~~~~~~~v~~v~~s~~--~~~l~~~~~dg~i~iwd~~ 164 (401)
T 4aez_A 89 GIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSV--SALAETDESTYVASVKWSHD--GSFLSVGLGNGLVDIYDVE 164 (401)
T ss_dssp TCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCE--EEEEECCTTCCEEEEEECTT--SSEEEEEETTSCEEEEETT
T ss_pred CCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcE--eEeeecCCCCCEEEEEECCC--CCEEEEECCCCeEEEEECc
Confidence 5655544333344456688899999999999976443 33333 38999999999864 8899999999999999997
Q ss_pred CCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCcee
Q 022111 88 NQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALV 167 (302)
Q Consensus 88 ~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 167 (302)
+. .....+.+|...|.+++|++ ..+++|+.|+.|++||++.... ....+ ..|...|.+++|+|+
T Consensus 165 ~~---~~~~~~~~~~~~v~~~~~~~----~~l~~~~~dg~i~i~d~~~~~~-~~~~~-~~~~~~v~~~~~~~~------- 228 (401)
T 4aez_A 165 SQ---TKLRTMAGHQARVGCLSWNR----HVLSSGSRSGAIHHHDVRIANH-QIGTL-QGHSSEVCGLAWRSD------- 228 (401)
T ss_dssp TC---CEEEEECCCSSCEEEEEEET----TEEEEEETTSEEEEEETTSSSC-EEEEE-ECCSSCEEEEEECTT-------
T ss_pred CC---eEEEEecCCCCceEEEEECC----CEEEEEcCCCCEEEEecccCcc-eeeEE-cCCCCCeeEEEEcCC-------
Confidence 65 35677889999999999964 4899999999999999974332 22333 378899999999986
Q ss_pred ecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEe--cCCeEEEEEeccC
Q 022111 168 GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS--QDGTVVIWTCAKE 245 (302)
Q Consensus 168 ~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s--~D~~i~iwd~~~~ 245 (302)
+.+|++|+.|+.|++||++++ .....+.+|...|.+++|+|++ ...+++++ .|+.|++||++..
T Consensus 229 -------~~~l~s~~~d~~v~iwd~~~~----~~~~~~~~~~~~v~~~~~~p~~---~~ll~~~~gs~d~~i~i~d~~~~ 294 (401)
T 4aez_A 229 -------GLQLASGGNDNVVQIWDARSS----IPKFTKTNHNAAVKAVAWCPWQ---SNLLATGGGTMDKQIHFWNAATG 294 (401)
T ss_dssp -------SSEEEEEETTSCEEEEETTCS----SEEEEECCCSSCCCEEEECTTS---TTEEEEECCTTTCEEEEEETTTC
T ss_pred -------CCEEEEEeCCCeEEEccCCCC----CccEEecCCcceEEEEEECCCC---CCEEEEecCCCCCEEEEEECCCC
Confidence 378999999999999999875 3445667899999999999986 46777766 8999999999764
Q ss_pred CcceeeeeeccCCCcEEEEEEccCCCEEEEec--CC-ceEEeeecC
Q 022111 246 GEQWEGRVLKDFKTPVWSVSWSLTGNLLAVAD--AN-NVTLWKEAV 288 (302)
Q Consensus 246 ~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~--~d-~i~~w~~~~ 288 (302)
... .. ..+...|.+++|+|+|++|++++ .+ .|++|+...
T Consensus 295 ~~~---~~-~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 295 ARV---NT-VDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp CEE---EE-EECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred CEE---EE-EeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence 321 11 24567899999999999999853 56 799999864
No 88
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.6e-31 Score=241.17 Aligned_cols=244 Identities=21% Similarity=0.416 Sum_probs=195.2
Q ss_pred ccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEE
Q 022111 5 KIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIW 84 (302)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iw 84 (302)
..+.+|...|++++| ++++|++|+.|++|++||+... +.+..+.+|...|.+++|+ +.+|++|+.|++|++|
T Consensus 167 ~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~--~~~~~~~~h~~~v~~l~~~----~~~l~s~s~dg~i~vw 238 (435)
T 1p22_A 167 RILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG--EMLNTLIHHCEAVLHLRFN----NGMMVTCSKDRSIAVW 238 (435)
T ss_dssp EEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC--CEEEEECCCCSCEEEEECC----TTEEEEEETTSCEEEE
T ss_pred EEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC--cEEEEEcCCCCcEEEEEEc----CCEEEEeeCCCcEEEE
Confidence 346689999999887 6889999999999999998653 4677888999999999995 4689999999999999
Q ss_pred EcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCC
Q 022111 85 KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPG 164 (302)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 164 (302)
|+++.........+.+|...|.+++|. +.++++|+.|+.|++||+++... ...+. .|...+.++.|+
T Consensus 239 d~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~l~s~~~dg~i~vwd~~~~~~--~~~~~-~~~~~v~~~~~~------ 305 (435)
T 1p22_A 239 DMASPTDITLRRVLVGHRAAVNVVDFD----DKYIVSASGDRTIKVWNTSTCEF--VRTLN-GHKRGIACLQYR------ 305 (435)
T ss_dssp ECSSSSCCEEEEEECCCSSCEEEEEEE----TTEEEEEETTSEEEEEETTTCCE--EEEEE-CCSSCEEEEEEE------
T ss_pred eCCCCCCceeeeEecCCCCcEEEEEeC----CCEEEEEeCCCeEEEEECCcCcE--EEEEc-CCCCcEEEEEeC------
Confidence 998765444446788899999999993 45899999999999999875432 23333 788889999884
Q ss_pred ceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEecc
Q 022111 165 ALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAK 244 (302)
Q Consensus 165 ~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~ 244 (302)
+..|++|+.|+.|++||++++ .++..+.+|...|.+++|+ +..|++|+.||.|++||++.
T Consensus 306 ----------~~~l~~g~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~~~~~------~~~l~sg~~dg~i~vwd~~~ 365 (435)
T 1p22_A 306 ----------DRLVVSGSSDNTIRLWDIECG----ACLRVLEGHEELVRCIRFD------NKRIVSGAYDGKIKVWDLVA 365 (435)
T ss_dssp ----------TTEEEEEETTSCEEEEETTTC----CEEEEECCCSSCEEEEECC------SSEEEEEETTSCEEEEEHHH
T ss_pred ----------CCEEEEEeCCCeEEEEECCCC----CEEEEEeCCcCcEEEEEec------CCEEEEEeCCCcEEEEECCC
Confidence 268999999999999999876 4566788999999999993 36799999999999999865
Q ss_pred CCcce------eeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCce
Q 022111 245 EGEQW------EGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGE 291 (302)
Q Consensus 245 ~~~~~------~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~ 291 (302)
..... ....+..|..+|.+++| ++++|++++.| .|++|+...+..
T Consensus 366 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 366 ALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp HTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC------
T ss_pred CCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCC
Confidence 32110 12334678889999999 78899999988 799999865443
No 89
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=6.9e-32 Score=243.70 Aligned_cols=214 Identities=17% Similarity=0.180 Sum_probs=168.5
Q ss_pred EEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcE
Q 022111 49 ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128 (302)
Q Consensus 49 ~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v 128 (302)
....+|...|++|+|+|. ++++||+|+.||+|+|||+..... .....+.+|.+.|++|+|+|.. +.+|++|+.|++|
T Consensus 113 ~~~~~~~~~V~~l~~~P~-~~~~lasGs~dg~i~lWd~~~~~~-~~~~~~~gH~~~V~~l~f~p~~-~~~l~s~s~D~~v 189 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPT-HPSTVAVGSKGGDIMLWNFGIKDK-PTFIKGIGAGGSITGLKFNPLN-TNQFYASSMEGTT 189 (435)
T ss_dssp CEEEECSSCEEEEEECSS-CTTCEEEEETTSCEEEECSSCCSC-CEEECCCSSSCCCCEEEECSSC-TTEEEEECSSSCE
T ss_pred ccCCCCCCCEEEEEEeCC-CCCEEEEEeCCCEEEEEECCCCCc-eeEEEccCCCCCEEEEEEeCCC-CCEEEEEeCCCEE
Confidence 345678899999999763 578999999999999999876532 3445677899999999999853 5689999999999
Q ss_pred EEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccC
Q 022111 129 SVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMH 208 (302)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h 208 (302)
++||++.. ..........+...+.++.|+|+ +.+|++|+.|+.|++||++.. .+..+.+|
T Consensus 190 ~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------------~~~l~~g~~dg~i~~wd~~~~-----~~~~~~~h 249 (435)
T 4e54_B 190 RLQDFKGN-ILRVFASSDTINIWFCSLDVSAS--------------SRMVVTGDNVGNVILLNMDGK-----ELWNLRMH 249 (435)
T ss_dssp EEEETTSC-EEEEEECCSSCSCCCCCEEEETT--------------TTEEEEECSSSBEEEEESSSC-----BCCCSBCC
T ss_pred EEeeccCC-ceeEEeccCCCCccEEEEEECCC--------------CCEEEEEeCCCcEeeeccCcc-----eeEEEecc
Confidence 99998642 22212111233445778888876 478999999999999998653 45678899
Q ss_pred CCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeec
Q 022111 209 SDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEA 287 (302)
Q Consensus 209 ~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~ 287 (302)
...|++++|+|++ ...|++++.|++|+|||++............+|..+|.+++|+|+|++|++++.| .|++|+..
T Consensus 250 ~~~v~~v~~~p~~---~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~ 326 (435)
T 4e54_B 250 KKKVTHVALNPCC---DWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSAS 326 (435)
T ss_dssp SSCEEEEEECTTC---SSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESS
T ss_pred cceEEeeeecCCC---ceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECC
Confidence 9999999999986 4689999999999999997643221112235678899999999999999999998 79999975
Q ss_pred C
Q 022111 288 V 288 (302)
Q Consensus 288 ~ 288 (302)
.
T Consensus 327 ~ 327 (435)
T 4e54_B 327 Q 327 (435)
T ss_dssp S
T ss_pred C
Confidence 4
No 90
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.7e-31 Score=267.77 Aligned_cols=268 Identities=20% Similarity=0.258 Sum_probs=204.9
Q ss_pred cccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
.+.+|...|++++|+|++++|++++.|++|++||+.+ .+.+..+.+|...|.+++|+++.++.++++++.|++|++||
T Consensus 652 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd 729 (1249)
T 3sfz_A 652 DIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT--GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWD 729 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT--CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEE
T ss_pred EeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC--CceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEE
Confidence 3568999999999999999999999999999999875 35677889999999999998754567899999999999999
Q ss_pred cCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeec----------ccCCCCeEEE
Q 022111 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRID----------QAHPVGVTSV 155 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~----------~~h~~~v~~~ 155 (302)
++++. +...+.+|...|.+++|+|+ +..+++|+.|+.|++||+............ ..+...+.++
T Consensus 730 ~~~~~---~~~~~~~h~~~v~~~~~sp~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 804 (1249)
T 3sfz_A 730 LNQKE---CRNTMFGHTNSVNHCRFSPD--DELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCC 804 (1249)
T ss_dssp TTSSS---EEEEECCCSSCEEEEEECSS--TTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCC
T ss_pred CCCcc---hhheecCCCCCEEEEEEecC--CCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEE
Confidence 97753 66778899999999999998 669999999999999998654221111100 0112245555
Q ss_pred EeCCCCCC----------------------------CceeecccCCCceeEEEeeCCCcEEEEEEecCcccccccccccc
Q 022111 156 SWAPAMAP----------------------------GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQM 207 (302)
Q Consensus 156 ~~~~~~~~----------------------------~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~ 207 (302)
+|+|++.. ..+..+...+++..+++++.|+.|++||+.++ .....+.+
T Consensus 805 ~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~----~~~~~~~~ 880 (1249)
T 3sfz_A 805 SWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSR----LKVADCRG 880 (1249)
T ss_dssp CBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTT----EEEEEECC
T ss_pred EECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCC----ceeeecCC
Confidence 56554310 11111223345688999999999999999876 34566789
Q ss_pred CCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCc----------------------------------------
Q 022111 208 HSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGE---------------------------------------- 247 (302)
Q Consensus 208 h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~---------------------------------------- 247 (302)
|.+.|.+++|+|++ ..|++++.|+.|++|++.....
T Consensus 881 h~~~v~~v~~spdg----~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 956 (1249)
T 3sfz_A 881 HLSWVHGVMFSPDG----SSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQI 956 (1249)
T ss_dssp CSSCEEEEEECTTS----SEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCE
T ss_pred CccceEEEEECCCC----CEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceE
Confidence 99999999999985 7899999999999999642000
Q ss_pred ------------------------------ce------eeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecC
Q 022111 248 ------------------------------QW------EGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAV 288 (302)
Q Consensus 248 ------------------------------~~------~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~ 288 (302)
.| .......|...|.+++|+|+|++|++++.| .|++|+...
T Consensus 957 ~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~ 1034 (1249)
T 3sfz_A 957 DYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQT 1034 (1249)
T ss_dssp EEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTT
T ss_pred EEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 00 001113456678899999999999999988 799999754
No 91
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.5e-31 Score=236.38 Aligned_cols=249 Identities=17% Similarity=0.269 Sum_probs=191.7
Q ss_pred eEEEEccCCC-EEEEeeCCCcEEEEeecCCCc--eEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCc
Q 022111 15 HDVAMDFYGK-RLATASSDSSIKIIGLSNSAS--QHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQND 91 (302)
Q Consensus 15 ~~~~~s~~~~-~l~s~~~d~~v~lw~~~~~~~--~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~ 91 (302)
..++++++.. ++++++.||.|+||++..... ..+..+.+|.+.|++++|++. ++++|++|+.|++|++||+.+...
T Consensus 38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~-~~~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPH-NDNVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp CSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTT-CTTEEEEEETTSEEEEEECCTTCC
T ss_pred CcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCC-CCCEEEEEeCCCeEEEEEccCCCC
Confidence 3467777664 444578999999999854211 234457899999999999862 378999999999999999976521
Q ss_pred e----eEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeec-ccCCCCeEEEEeCCCCCCCce
Q 022111 92 W----TQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRID-QAHPVGVTSVSWAPAMAPGAL 166 (302)
Q Consensus 92 ~----~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~~ 166 (302)
. .+...+.+|...|.+++|+|+. ..+|++++.|+.|++||+.... ....+. ..|...|.+++|+|++
T Consensus 117 ~~~~~~~~~~~~~h~~~v~~~~~~p~~-~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~----- 188 (402)
T 2aq5_A 117 VLPLREPVITLEGHTKRVGIVAWHPTA-QNVLLSAGCDNVILVWDVGTGA--AVLTLGPDVHPDTIYSVDWSRDG----- 188 (402)
T ss_dssp SSCBCSCSEEEECCSSCEEEEEECSSB-TTEEEEEETTSCEEEEETTTTE--EEEEECTTTCCSCEEEEEECTTS-----
T ss_pred ccccCCceEEecCCCCeEEEEEECcCC-CCEEEEEcCCCEEEEEECCCCC--ccEEEecCCCCCceEEEEECCCC-----
Confidence 1 2456778899999999999983 2589999999999999987542 223332 3788999999999863
Q ss_pred eecccCCCceeEEEeeCCCcEEEEEEecCcccccccccc-ccCCCc-eeEEEeeCCCCCCccEEEEE---ecCCeEEEEE
Q 022111 167 VGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPAL-QMHSDW-VRSVAWAPNLGLPKSTIASA---SQDGTVVIWT 241 (302)
Q Consensus 167 ~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~-~~h~~~-v~~v~~~p~~~~~~~~l~s~---s~D~~i~iwd 241 (302)
.+|++++.|+.|++||++++. .+..+ .+|.+. +.++.|+|++ ..|++| +.|+.|++||
T Consensus 189 ---------~~l~~~~~d~~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~----~~l~~g~~~~~d~~i~iwd 251 (402)
T 2aq5_A 189 ---------ALICTSCRDKRVRVIEPRKGT----VVAEKDRPHEGTRPVHAVFVSEG----KILTTGFSRMSERQVALWD 251 (402)
T ss_dssp ---------SCEEEEETTSEEEEEETTTTE----EEEEEECSSCSSSCCEEEECSTT----EEEEEEECTTCCEEEEEEE
T ss_pred ---------CEEEEEecCCcEEEEeCCCCc----eeeeeccCCCCCcceEEEEcCCC----cEEEEeccCCCCceEEEEc
Confidence 789999999999999998763 34455 678776 8999999985 788888 7999999999
Q ss_pred eccCCcceeeeeeccCCCcEEEEEEccCCCEEEEe-cCC-ceEEeeecCCc
Q 022111 242 CAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVA-DAN-NVTLWKEAVDG 290 (302)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~-~~d-~i~~w~~~~~~ 290 (302)
++...... ......+...+.+++|+|+|++|+++ +.| .|++|+.....
T Consensus 252 ~~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 252 TKHLEEPL-SLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp TTBCSSCS-EEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred CccccCCc-eEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 98643211 12223556779999999999999654 456 79999987655
No 92
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.9e-31 Score=254.85 Aligned_cols=251 Identities=21% Similarity=0.287 Sum_probs=206.0
Q ss_pred cccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
.+.+|...|++++|+|++++|++++.|++|++|++.. .+.+..+.+|.+.|++++|+++ +++|++++.|++|++||
T Consensus 50 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~--~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~vw~ 125 (814)
T 3mkq_A 50 SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT--GEKVVDFEAHPDYIRSIAVHPT--KPYVLSGSDDLTVKLWN 125 (814)
T ss_dssp EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT--CCEEEEEECCSSCEEEEEECSS--SSEEEEEETTSEEEEEE
T ss_pred EEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCC--CcEEEEEecCCCCEEEEEEeCC--CCEEEEEcCCCEEEEEE
Confidence 4558999999999999999999999999999999865 3466788899999999999864 78999999999999999
Q ss_pred cCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCc
Q 022111 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 165 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 165 (302)
+++.. .....+.+|..+|.+++|+|+. +..+++++.|+.|++||+...... ..+...+...+..++|+|..
T Consensus 126 ~~~~~--~~~~~~~~~~~~v~~~~~~p~~-~~~l~~~~~dg~v~vwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~---- 196 (814)
T 3mkq_A 126 WENNW--ALEQTFEGHEHFVMCVAFNPKD-PSTFASGCLDRTVKVWSLGQSTPN--FTLTTGQERGVNYVDYYPLP---- 196 (814)
T ss_dssp GGGTS--EEEEEEECCSSCEEEEEEETTE-EEEEEEEETTSEEEEEETTCSSCS--EEEECCCTTCCCEEEECCST----
T ss_pred CCCCc--eEEEEEcCCCCcEEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCcce--eEEecCCCCCEEEEEEEECC----
Confidence 97642 3566778899999999999932 668999999999999998654322 23333455789999999832
Q ss_pred eeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccC
Q 022111 166 LVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKE 245 (302)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~ 245 (302)
++..|++++.|+.|++||+.++ .+...+.+|...|.+++|+|++ ..|++++.||.|++||+...
T Consensus 197 --------~~~~l~~~~~dg~i~~~d~~~~----~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~v~vwd~~~~ 260 (814)
T 3mkq_A 197 --------DKPYMITASDDLTIKIWDYQTK----SCVATLEGHMSNVSFAVFHPTL----PIIISGSEDGTLKIWNSSTY 260 (814)
T ss_dssp --------TCCEEEEECTTSEEEEEETTTT----EEEEEEECCSSCEEEEEECSSS----SEEEEEETTSCEEEEETTTC
T ss_pred --------CCCEEEEEeCCCEEEEEECCCC----cEEEEEcCCCCCEEEEEEcCCC----CEEEEEeCCCeEEEEECCCC
Confidence 2478999999999999999775 3456678899999999999995 78999999999999998754
Q ss_pred CcceeeeeeccCCCcEEEEEEccCCC--EEEEecCCceEEeeecC
Q 022111 246 GEQWEGRVLKDFKTPVWSVSWSLTGN--LLAVADANNVTLWKEAV 288 (302)
Q Consensus 246 ~~~~~~~~~~~~~~~v~~~~~spdg~--~la~~~~d~i~~w~~~~ 288 (302)
.. ......+...+++++|+|+|. +++++..+++.+|+...
T Consensus 261 ~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 261 KV---EKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp SE---EEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSC
T ss_pred cE---EEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCC
Confidence 22 223355667899999999997 57777777899998643
No 93
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-31 Score=238.13 Aligned_cols=255 Identities=12% Similarity=0.113 Sum_probs=187.8
Q ss_pred ccccceeEEEEccCCCEEEEeeCCCcEEEEeecCC-CceEEEEecC------------cccCeEEEEeeCCCCCCEEEEE
Q 022111 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNS-ASQHLATLKG------------HRGPVWQVAWAHPKFGSILASC 75 (302)
Q Consensus 9 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~-~~~~~~~~~~------------h~~~v~~v~~~~~~~~~~l~s~ 75 (302)
+|...|++++|++++++|++|+.|++|++||+... ..+.+..+.+ +...+.++.+....++.+|+++
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence 69999999999999999999999999999998411 1112222222 4455666664322347899999
Q ss_pred eCCCeEEEEEcCCCCceeEEEEecC--CCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeE
Q 022111 76 SYDGQVIIWKEGNQNDWTQAHTFND--HKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVT 153 (302)
Q Consensus 76 s~D~~i~iwd~~~~~~~~~~~~~~~--h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~ 153 (302)
+.|++|++||+++.. ++..+.. |...|.+++|+|+ +.+|++|+.|+.|++||++... ....+...|...|.
T Consensus 189 ~~d~~i~iwd~~~~~---~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~ 261 (437)
T 3gre_A 189 TNLSRVIIFDIRTLE---RLQIIENSPRHGAVSSICIDEE--CCVLILGTTRGIIDIWDIRFNV--LIRSWSFGDHAPIT 261 (437)
T ss_dssp ETTSEEEEEETTTCC---EEEEEECCGGGCCEEEEEECTT--SCEEEEEETTSCEEEEETTTTE--EEEEEBCTTCEEEE
T ss_pred eCCCeEEEEeCCCCe---eeEEEccCCCCCceEEEEECCC--CCEEEEEcCCCeEEEEEcCCcc--EEEEEecCCCCceE
Confidence 999999999997753 5666776 8899999999998 6799999999999999997532 22333335677899
Q ss_pred EEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccc--------------------ccccc--CCCc
Q 022111 154 SVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCF--------------------PALQM--HSDW 211 (302)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~--------------------~~~~~--h~~~ 211 (302)
+++|+|... +++.+|++|+.|+.|++||++++....... ..+.+ |...
T Consensus 262 ~~~~~~~~s----------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 331 (437)
T 3gre_A 262 HVEVCQFYG----------KNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNA 331 (437)
T ss_dssp EEEECTTTC----------TTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGG
T ss_pred EEEeccccC----------CCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCc
Confidence 999987532 245789999999999999997653110000 01233 7888
Q ss_pred eeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeee----------------------------------eeccC
Q 022111 212 VRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGR----------------------------------VLKDF 257 (302)
Q Consensus 212 v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~----------------------------------~~~~~ 257 (302)
|.+++|+ ++ .+|++|+.|+.|++||++......... ....|
T Consensus 332 v~~l~~~-~~----~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 406 (437)
T 3gre_A 332 LSTISVS-ND----KILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYH 406 (437)
T ss_dssp GCCEEEE-TT----EEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------
T ss_pred eEEEEEC-Cc----eEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCccccc
Confidence 9999999 42 789999999999999987542111000 00126
Q ss_pred CCcEEEEEEccC--CCEEEEecCC-ceEEee
Q 022111 258 KTPVWSVSWSLT--GNLLAVADAN-NVTLWK 285 (302)
Q Consensus 258 ~~~v~~~~~spd--g~~la~~~~d-~i~~w~ 285 (302)
...|.+++|+++ +.+|++|+.| .|+||+
T Consensus 407 ~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 407 HDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 788999999998 7899999998 699995
No 94
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.7e-30 Score=234.49 Aligned_cols=233 Identities=18% Similarity=0.302 Sum_probs=193.6
Q ss_pred ccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCC
Q 022111 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGN 88 (302)
Q Consensus 9 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~ 88 (302)
+|...|+++.+ ++++|++|+.|++|++||+.. .+.+..+.+|.+.|.+++|. +++|++|+.|++|++||+++
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~--~~~~~~~~~h~~~v~~l~~~----~~~l~sg~~dg~i~vwd~~~ 202 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNT--LECKRILTGHTGSVLCLQYD----ERVIITGSSDSTVRVWDVNT 202 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSS--CCEEEEECCCSSCEEEEECC----SSEEEEEETTSCEEEEESSS
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCC--CeEEEEEcCCCCcEEEEEEC----CCEEEEEcCCCeEEEEECCC
Confidence 56678887765 789999999999999999865 45677889999999999982 68999999999999999977
Q ss_pred CCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceee
Q 022111 89 QNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVG 168 (302)
Q Consensus 89 ~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 168 (302)
+ .....+.+|...|.+++|+++ .+++|+.|+.|++||+.............+|...|.++.|.
T Consensus 203 ~---~~~~~~~~h~~~v~~l~~~~~----~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~---------- 265 (435)
T 1p22_A 203 G---EMLNTLIHHCEAVLHLRFNNG----MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD---------- 265 (435)
T ss_dssp C---CEEEEECCCCSCEEEEECCTT----EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE----------
T ss_pred C---cEEEEEcCCCCcEEEEEEcCC----EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC----------
Confidence 6 367788899999999999753 89999999999999997654433323334788899999883
Q ss_pred cccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcc
Q 022111 169 LGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQ 248 (302)
Q Consensus 169 ~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~ 248 (302)
+..|++|+.|+.|++||+.++ .++..+.+|...|.+++|++ ..|++|+.|+.|++||++....
T Consensus 266 ------~~~l~s~~~dg~i~vwd~~~~----~~~~~~~~~~~~v~~~~~~~------~~l~~g~~dg~i~iwd~~~~~~- 328 (435)
T 1p22_A 266 ------DKYIVSASGDRTIKVWNTSTC----EFVRTLNGHKRGIACLQYRD------RLVVSGSSDNTIRLWDIECGAC- 328 (435)
T ss_dssp ------TTEEEEEETTSEEEEEETTTC----CEEEEEECCSSCEEEEEEET------TEEEEEETTSCEEEEETTTCCE-
T ss_pred ------CCEEEEEeCCCeEEEEECCcC----cEEEEEcCCCCcEEEEEeCC------CEEEEEeCCCeEEEEECCCCCE-
Confidence 368999999999999999876 35567789999999999963 5799999999999999986421
Q ss_pred eeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeec
Q 022111 249 WEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEA 287 (302)
Q Consensus 249 ~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~ 287 (302)
......|...|.+++| ++++|++|+.| .|++|+..
T Consensus 329 --~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~ 364 (435)
T 1p22_A 329 --LRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLV 364 (435)
T ss_dssp --EEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHH
T ss_pred --EEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECC
Confidence 2334678889999999 78899999988 79999974
No 95
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-30 Score=225.15 Aligned_cols=223 Identities=24% Similarity=0.336 Sum_probs=177.6
Q ss_pred cccccccceeEEEEccC--CCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEE
Q 022111 6 IETGHEDTVHDVAMDFY--GKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~--~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~i 83 (302)
.+.+|...|++++|+++ +++|++|+.|++|++||+.......+..+.+|...|.+++|+++..+++|++++.|+.|++
T Consensus 50 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v 129 (379)
T 3jrp_A 50 TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSV 129 (379)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred EecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEE
Confidence 45689999999999977 8999999999999999998754446777888999999999986422689999999999999
Q ss_pred EEcCCCCceeEEEEecCCCCCeeEEEecCCC-----------CCcEEEEEecCCcEEEEEecCCCCe-eeeeecccCCCC
Q 022111 84 WKEGNQNDWTQAHTFNDHKSSVNSIAWAPHE-----------LGLSLACGSSDGNISVFTATADGGW-DTTRIDQAHPVG 151 (302)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~-----------~~~~l~sg~~d~~v~~~~~~~~~~~-~~~~~~~~h~~~ 151 (302)
||++.... .....+..|...|.+++|+|.. ++..+++|+.|+.|++||++..... ........|...
T Consensus 130 ~d~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~ 208 (379)
T 3jrp_A 130 VEFKENGT-TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW 208 (379)
T ss_dssp EECCTTSC-CCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred EecCCCCc-eeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCc
Confidence 99976533 2334566799999999999931 2568999999999999999854432 222222378899
Q ss_pred eEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcccc-ccccccccCCCceeEEEeeCCCCCCccEEEE
Q 022111 152 VTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKM-DCFPALQMHSDWVRSVAWAPNLGLPKSTIAS 230 (302)
Q Consensus 152 v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s 230 (302)
|.+++|+|+.. .+.+|++++.|+.|++||+.++.... ........|...|.+++|+|++ .+|++
T Consensus 209 v~~~~~sp~~~-----------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g----~~l~~ 273 (379)
T 3jrp_A 209 VRDVAWSPTVL-----------LRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG----NVLAL 273 (379)
T ss_dssp EEEEEECCCCS-----------SSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSS----CCEEE
T ss_pred EeEEEECCCCC-----------CCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCC----CEEEE
Confidence 99999998620 03789999999999999998753211 1223345688999999999996 67999
Q ss_pred EecCCeEEEEEecc
Q 022111 231 ASQDGTVVIWTCAK 244 (302)
Q Consensus 231 ~s~D~~i~iwd~~~ 244 (302)
++.|+.|++|++..
T Consensus 274 ~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 274 SGGDNKVTLWKENL 287 (379)
T ss_dssp EESSSSEEEEEEEE
T ss_pred ecCCCcEEEEeCCC
Confidence 99999999999873
No 96
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-31 Score=233.80 Aligned_cols=240 Identities=13% Similarity=0.066 Sum_probs=173.7
Q ss_pred EccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCC------ce
Q 022111 19 MDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQN------DW 92 (302)
Q Consensus 19 ~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~------~~ 92 (302)
+.+++++|++|+.|++|++||+..+. .+..+. ...|.++.|.+ . +++++.|+++++|+..... ..
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~--~~~~~~--~~~v~~~~~~~----~-~~s~s~D~~i~~w~~~~~~~~~~~~~~ 114 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSK--TITTIT--TPNPRTGGEHP----A-IISRGPCNRLLLLYPGNQITILDSKTN 114 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSS--CEEEEE--EECCCTTCCCC----S-EEEECSTTEEEEEETTTEEEEEETTTC
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCc--EEEEEe--cCCceeeeeCC----c-eEEecCCCeEEEEEccCceEEeecCCc
Confidence 34567899999999999999997643 344443 45677788753 2 8999999999999865311 11
Q ss_pred eEEEEe-cCCCCCeeEEEecC--CCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeec
Q 022111 93 TQAHTF-NDHKSSVNSIAWAP--HELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGL 169 (302)
Q Consensus 93 ~~~~~~-~~h~~~i~~l~~~p--d~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 169 (302)
..+..+ ..|.++|.+++|+| + +.++++|+.|++|++||++.... .......|...+.+++|+|++
T Consensus 115 ~~~~~~~~~~~~~v~~~~~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~--~~~~~~~~~~~i~~~~~~pdg-------- 182 (343)
T 3lrv_A 115 KVLREIEVDSANEIIYMYGHNEVN--TEYFIWADNRGTIGFQSYEDDSQ--YIVHSAKSDVEYSSGVLHKDS-------- 182 (343)
T ss_dssp CEEEEEECCCSSCEEEEECCC-----CCEEEEEETTCCEEEEESSSSCE--EEEECCCSSCCCCEEEECTTS--------
T ss_pred ceeEEeecCCCCCEEEEEcCCCCC--CCEEEEEeCCCcEEEEECCCCcE--EEEEecCCCCceEEEEECCCC--------
Confidence 112222 25778999999999 6 67999999999999999975533 222222455679999999864
Q ss_pred ccCCCceeEEEeeCCCcEEEEEEecCccccccc-ccccc-CCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCc
Q 022111 170 GLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCF-PALQM-HSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGE 247 (302)
Q Consensus 170 ~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~-~~~~~-h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~ 247 (302)
.+|++|+.|+.|+|||++++. .. ..+.+ |.+.|.+++|+|++ .+|+++++| .|++||++....
T Consensus 183 ------~~lasg~~dg~i~iwd~~~~~----~~~~~~~~~h~~~v~~l~fs~~g----~~l~s~~~~-~v~iwd~~~~~~ 247 (343)
T 3lrv_A 183 ------LLLALYSPDGILDVYNLSSPD----QASSRFPVDEEAKIKEVKFADNG----YWMVVECDQ-TVVCFDLRKDVG 247 (343)
T ss_dssp ------CEEEEECTTSCEEEEESSCTT----SCCEECCCCTTSCEEEEEECTTS----SEEEEEESS-BEEEEETTSSTT
T ss_pred ------CEEEEEcCCCEEEEEECCCCC----CCccEEeccCCCCEEEEEEeCCC----CEEEEEeCC-eEEEEEcCCCCc
Confidence 789999999999999998763 22 45666 99999999999985 789999955 999999986532
Q ss_pred ceeeeeeccCCCcE--EEEEEccCCCEEEEecC-C-ceEEeeecC-CceEEE
Q 022111 248 QWEGRVLKDFKTPV--WSVSWSLTGNLLAVADA-N-NVTLWKEAV-DGEWQQ 294 (302)
Q Consensus 248 ~~~~~~~~~~~~~v--~~~~~spdg~~la~~~~-d-~i~~w~~~~-~~~~~~ 294 (302)
.........+..++ .+++|+|+|++|++++. + .+++|+... .+.|+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 248 TLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp CBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE
T ss_pred ceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe
Confidence 21111111122333 36999999999999766 5 799999844 344776
No 97
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-30 Score=235.10 Aligned_cols=258 Identities=12% Similarity=0.052 Sum_probs=190.1
Q ss_pred ccceeEEEEccCCCEEEEeeCCCcEEEEeecCCC-ceEEEEec-------------------------------------
Q 022111 11 EDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSA-SQHLATLK------------------------------------- 52 (302)
Q Consensus 11 ~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~-~~~~~~~~------------------------------------- 52 (302)
..++.+++|+++|++|+++ .++.|++||+..+. .+.+..+.
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3578899999999966655 58899999986543 00222222
Q ss_pred -----------------CcccCeEEEEeeCCCCCCEE-EEEeCCCeEEEEEcC--CCCceeEEEEec--CCCCCeeEEEe
Q 022111 53 -----------------GHRGPVWQVAWAHPKFGSIL-ASCSYDGQVIIWKEG--NQNDWTQAHTFN--DHKSSVNSIAW 110 (302)
Q Consensus 53 -----------------~h~~~v~~v~~~~~~~~~~l-~s~s~D~~i~iwd~~--~~~~~~~~~~~~--~h~~~i~~l~~ 110 (302)
+|.+.|++++|+++ +++| ++++.|++|++||+. ++. ....+. .|...|.+++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~~dg~v~iwd~~~~~~~---~~~~~~~~~~~~~v~~~~~ 157 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSD--ESRLIACADSDKSLLVFDVDKTSKN---VLKLRKRFCFSKRPNAISI 157 (450)
T ss_dssp -----------------CCCCCEEEEEECTT--SSEEEEEEGGGTEEEEEEECSSSSS---CEEEEEEEECSSCEEEEEE
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCC--CCEEEEEECCCCeEEEEECcCCCCc---eeeeeecccCCCCceEEEE
Confidence 34557999999874 7775 899999999999997 543 334443 47789999999
Q ss_pred cCCCCCcEEEEEecCCcEEEEEecCCCCee-eeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEE
Q 022111 111 APHELGLSLACGSSDGNISVFTATADGGWD-TTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKV 189 (302)
Q Consensus 111 ~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~i 189 (302)
+|+ +.+|++|+.++.+++|++....... ......+|...|.+++|+|+.. .+.+|++|+.|+.|++
T Consensus 158 sp~--~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~-----------~~~~l~s~~~d~~i~v 224 (450)
T 2vdu_B 158 AED--DTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSD-----------GHQFIITSDRDEHIKI 224 (450)
T ss_dssp CTT--SSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTT-----------SCEEEEEEETTSCEEE
T ss_pred cCC--CCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCC-----------CCcEEEEEcCCCcEEE
Confidence 998 6799999999999999986543221 1112236888999999999610 1378999999999999
Q ss_pred EEEecCccccccccc-cccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeee--------------
Q 022111 190 WKMYNGIWKMDCFPA-LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVL-------------- 254 (302)
Q Consensus 190 wd~~~~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~-------------- 254 (302)
||+.++. ++.. +.+|...|.+++|+ ++ .+|++++.|+.|++||++...........
T Consensus 225 wd~~~~~----~~~~~~~~h~~~v~~~~~s-d~----~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (450)
T 2vdu_B 225 SHYPQCF----IVDKWLFGHKHFVSSICCG-KD----YLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAP 295 (450)
T ss_dssp EEESCTT----CEEEECCCCSSCEEEEEEC-ST----TEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-
T ss_pred EECCCCc----eeeeeecCCCCceEEEEEC-CC----CEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccccc
Confidence 9998763 3334 56899999999999 74 78999999999999999764321110100
Q ss_pred --------ccCCCcEEEEEEccCCCEEEEec-CC-ceEEeee--cCCceEEEee
Q 022111 255 --------KDFKTPVWSVSWSLTGNLLAVAD-AN-NVTLWKE--AVDGEWQQVS 296 (302)
Q Consensus 255 --------~~~~~~v~~~~~spdg~~la~~~-~d-~i~~w~~--~~~~~~~~~~ 296 (302)
......|.+++|+|++++|++++ .+ .|++|+. ...+.+....
T Consensus 296 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~ 349 (450)
T 2vdu_B 296 PRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQ 349 (450)
T ss_dssp ---------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEE
T ss_pred ccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeecc
Confidence 02234689999999999999987 55 7999999 5454555443
No 98
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1e-30 Score=244.48 Aligned_cols=252 Identities=14% Similarity=0.229 Sum_probs=202.8
Q ss_pred cccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCC--ceEEEEecCcccC-eEEEEeeCCCCCCEEEEEeCCCeEEEE
Q 022111 8 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSA--SQHLATLKGHRGP-VWQVAWAHPKFGSILASCSYDGQVIIW 84 (302)
Q Consensus 8 ~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~--~~~~~~~~~h~~~-v~~v~~~~~~~~~~l~s~s~D~~i~iw 84 (302)
..|.+.|++++|+|++++||+++ ++.|++|++.... .+....+.+|... |.+++|++-.++++|++++.|++|++|
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEE
Confidence 36889999999999999999988 8899999987530 1456788999999 999999871137899999999999999
Q ss_pred EcCCCC-----ceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecC----CcEEEEEecCCCCeeeeeecccCCCCeEEE
Q 022111 85 KEGNQN-----DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD----GNISVFTATADGGWDTTRIDQAHPVGVTSV 155 (302)
Q Consensus 85 d~~~~~-----~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d----~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~ 155 (302)
|+.++. .......+..|...|.+++|+|+ +.+|++++.+ +.|.+|+.. . ....+ ..|...|.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~~~~~~~~v~~~d~~--~--~~~~~-~~~~~~v~~~ 166 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFE--GRRLCVVGEGRDNFGVFISWDSG--N--SLGEV-SGHSQRINAC 166 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTT--SSEEEEEECCSSCSEEEEETTTC--C--EEEEC-CSCSSCEEEE
T ss_pred eCCCCcccccccccccchhhcccccEEEEEEeCC--CCEEEEeccCCCCccEEEEEECC--C--cceee-ecCCccEEEE
Confidence 985320 12456678889999999999998 6689999888 688888732 1 22333 3789999999
Q ss_pred EeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCC---ceeEEEeeCC-CCCCccEEEEE
Q 022111 156 SWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSD---WVRSVAWAPN-LGLPKSTIASA 231 (302)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~---~v~~v~~~p~-~~~~~~~l~s~ 231 (302)
.|+|++ ...|++++.|+.|++||+.+. .+...+.+|.. .|.+++|+|+ + ++|+++
T Consensus 167 ~~~~~~-------------~~~l~~~~~d~~v~vwd~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~----~~l~~~ 225 (615)
T 1pgu_A 167 HLKQSR-------------PMRSMTVGDDGSVVFYQGPPF----KFSASDRTHHKQGSFVRDVEFSPDSG----EFVITV 225 (615)
T ss_dssp EECSSS-------------SCEEEEEETTTEEEEEETTTB----EEEEEECSSSCTTCCEEEEEECSTTC----CEEEEE
T ss_pred EECCCC-------------CcEEEEEeCCCcEEEEeCCCc----ceeeeecccCCCCceEEEEEECCCCC----CEEEEE
Confidence 999864 237999999999999998765 34566788998 9999999998 5 789999
Q ss_pred ecCCeEEEEEeccCCcceeeeeec---cCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCce
Q 022111 232 SQDGTVVIWTCAKEGEQWEGRVLK---DFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGE 291 (302)
Q Consensus 232 s~D~~i~iwd~~~~~~~~~~~~~~---~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~ 291 (302)
+.|+.|++||++.... ...+.. .+..+|.+++|+ ++++|++++.| .|++|+......
T Consensus 226 ~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~ 286 (615)
T 1pgu_A 226 GSDRKISCFDGKSGEF--LKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKC 286 (615)
T ss_dssp ETTCCEEEEETTTCCE--EEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEE
T ss_pred eCCCeEEEEECCCCCE--eEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcE
Confidence 9999999999876432 112213 678899999999 99999999988 799999864433
No 99
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.5e-31 Score=233.27 Aligned_cols=205 Identities=17% Similarity=0.142 Sum_probs=159.3
Q ss_pred ccccceeEEEEccCCCEEE--EeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEc
Q 022111 9 GHEDTVHDVAMDFYGKRLA--TASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE 86 (302)
Q Consensus 9 ~h~~~v~~~~~s~~~~~l~--s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~ 86 (302)
.++..+..++|||||++|| +++.|++|+|||+.. .+.+..+. |.+.|++|+|+|+ |++|++++.|+ +++|+.
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~--~~~~~~~~-~~~~V~~v~fspd--g~~l~s~s~~~-~~~~~~ 204 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSD--LTEKFEIE-TRGEVKDLHFSTD--GKVVAYITGSS-LEVIST 204 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTT--TEEEEEEE-CSSCCCEEEECTT--SSEEEEECSSC-EEEEET
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCC--CcEEEEeC-CCCceEEEEEccC--CceEEecccee-EEEEEe
Confidence 3556788999999999876 455899999999865 44556664 7788999999874 89999998665 555555
Q ss_pred CCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCC----cEEEEEecCCCCee--eeeecccCCCCeEEEEeCCC
Q 022111 87 GNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDG----NISVFTATADGGWD--TTRIDQAHPVGVTSVSWAPA 160 (302)
Q Consensus 87 ~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~----~v~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~~~~ 160 (302)
.++.. ........|...|.+++|+|+ +..+++++.|+ .+++|+........ ...+ ..|...|++++|+|+
T Consensus 205 ~~~~~-~~~~~~~~~~~~v~~v~fspd--g~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~V~~~~~Spd 280 (365)
T 4h5i_A 205 VTGSC-IARKTDFDKNWSLSKINFIAD--DTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQV-TNRFKGITSMDVDMK 280 (365)
T ss_dssp TTCCE-EEEECCCCTTEEEEEEEEEET--TEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEE-ESSCSCEEEEEECTT
T ss_pred ccCcc-eeeeecCCCCCCEEEEEEcCC--CCEEEEEecCCcceeEEeecccccceecceeeeee-cCCCCCeEeEEECCC
Confidence 44321 223345678999999999998 67899998887 57778876432111 1223 368889999999996
Q ss_pred CCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccc-cccCCCceeEEEeeCCCCCCccEEEEEecCCeEEE
Q 022111 161 MAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPA-LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVI 239 (302)
Q Consensus 161 ~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~i 239 (302)
+++||+|+.|++|+|||+.++ .++.. +.+|...|++|+|+||+ ++|||||.|++|||
T Consensus 281 --------------g~~lasgs~D~~V~iwd~~~~----~~~~~~~~gH~~~V~~v~fSpdg----~~laS~S~D~tvrv 338 (365)
T 4h5i_A 281 --------------GELAVLASNDNSIALVKLKDL----SMSKIFKQAHSFAITEVTISPDS----TYVASVSAANTIHI 338 (365)
T ss_dssp --------------SCEEEEEETTSCEEEEETTTT----EEEEEETTSSSSCEEEEEECTTS----CEEEEEETTSEEEE
T ss_pred --------------CCceEEEcCCCEEEEEECCCC----cEEEEecCcccCCEEEEEECCCC----CEEEEEeCCCeEEE
Confidence 489999999999999999876 34444 47899999999999995 88999999999999
Q ss_pred EEeccC
Q 022111 240 WTCAKE 245 (302)
Q Consensus 240 wd~~~~ 245 (302)
||+...
T Consensus 339 w~ip~~ 344 (365)
T 4h5i_A 339 IKLPLN 344 (365)
T ss_dssp EECCTT
T ss_pred EEcCCC
Confidence 998643
No 100
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-31 Score=256.90 Aligned_cols=245 Identities=16% Similarity=0.186 Sum_probs=187.0
Q ss_pred ccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEc
Q 022111 7 ETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE 86 (302)
Q Consensus 7 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~ 86 (302)
..||.+.|++++|+|++++||+|+.|++|+||+... .+....+ .|...|.+++|++ +++|++++.|++|++||+
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~--~~~~~~~-~~~~~V~~l~fsp---g~~L~S~s~D~~v~lWd~ 86 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQ--VEVVIKL-EDRSAIKEMRFVK---GIYLVVINAKDTVYVLSL 86 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTT--CEEEEEC-SSCCCEEEEEEET---TTEEEEEETTCEEEEEET
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCC--cEEEEEc-CCCCCEEEEEEcC---CCEEEEEECcCeEEEEEC
Confidence 448999999999999999999999999999999754 3333333 5888999999986 569999999999999999
Q ss_pred CCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeee--------eecccCCCCeEEEEeC
Q 022111 87 GNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTT--------RIDQAHPVGVTSVSWA 158 (302)
Q Consensus 87 ~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~--------~~~~~h~~~v~~~~~~ 158 (302)
+++. ++.++. |...|++++|+|+ +.+|++|+.|++|++||+......... ....+|...|.+++|+
T Consensus 87 ~~~~---~~~~~~-~~~~V~~v~~sp~--g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~s 160 (902)
T 2oaj_A 87 YSQK---VLTTVF-VPGKITSIDTDAS--LDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWN 160 (902)
T ss_dssp TTCS---EEEEEE-CSSCEEEEECCTT--CSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEE
T ss_pred CCCc---EEEEEc-CCCCEEEEEECCC--CCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEc
Confidence 7753 455565 6789999999998 679999999999999998753211000 1123688899999999
Q ss_pred CCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcccccccccc------------------ccCCCceeEEEeeCC
Q 022111 159 PAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPAL------------------QMHSDWVRSVAWAPN 220 (302)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~------------------~~h~~~v~~v~~~p~ 220 (302)
|+. +..|++|+.|+.| +||++++. ++..+ ..|...|++++|+|+
T Consensus 161 p~~-------------~~~l~~g~~dg~v-lWd~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspd 222 (902)
T 2oaj_A 161 PRD-------------IGTVLISYEYVTL-TYSLVENE----IKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPN 222 (902)
T ss_dssp TTE-------------EEEEEEECSSCEE-EEETTTTE----EEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTT
T ss_pred cCC-------------CCEEEEEeCCCcE-EEECCCCc----eEEEEecccCCcCCCcccccccccccCCCeEEEEEcCC
Confidence 853 3689999999999 99998753 22223 235688999999999
Q ss_pred CCCCccEEEEEecCCeEEEEEeccCCcceeeeee-----c-----------cCCCcEEEEEEc----cCC-CEEEEecCC
Q 022111 221 LGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVL-----K-----------DFKTPVWSVSWS----LTG-NLLAVADAN 279 (302)
Q Consensus 221 ~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~-----~-----------~~~~~v~~~~~s----pdg-~~la~~~~d 279 (302)
+ .+|++++.|++|++||++..... ..+.+ . .+..+|.+++|+ |++ .+|++++.+
T Consensus 223 g----~~lasgs~Dg~i~lWd~~~g~~~-~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~ 297 (902)
T 2oaj_A 223 S----LHIITIHEDNSLVFWDANSGHMI-MARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSI 297 (902)
T ss_dssp S----SEEEEEETTCCEEEEETTTCCEE-EEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECS
T ss_pred C----CEEEEEECCCeEEEEECCCCcEE-EEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCC
Confidence 5 78999999999999999764211 11111 0 124479999995 444 566777544
Q ss_pred ------ceEEeee
Q 022111 280 ------NVTLWKE 286 (302)
Q Consensus 280 ------~i~~w~~ 286 (302)
.+++|+.
T Consensus 298 ~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 298 SRGDNQSLTMIDL 310 (902)
T ss_dssp TTSSCCCEEEEEE
T ss_pred CCCCCceEEEEec
Confidence 5788874
No 101
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.9e-30 Score=231.92 Aligned_cols=258 Identities=13% Similarity=0.071 Sum_probs=191.2
Q ss_pred cccccceeEEEEccCCCEE-EEeeCCCcEEEEeecCCCceEEEEec--CcccCeEEEEeeCCCCCCEEEEEeCCCeEEEE
Q 022111 8 TGHEDTVHDVAMDFYGKRL-ATASSDSSIKIIGLSNSASQHLATLK--GHRGPVWQVAWAHPKFGSILASCSYDGQVIIW 84 (302)
Q Consensus 8 ~~h~~~v~~~~~s~~~~~l-~s~~~d~~v~lw~~~~~~~~~~~~~~--~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iw 84 (302)
.+|.+.|++++|+|++++| ++++.|++|+||++.......+..+. .|...|.+++|+++ +++|++++.|+.+.+|
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~~g~v~~~ 176 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAED--DTTVIIADKFGDVYSI 176 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTT--SSEEEEEETTSEEEEE
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCC--CCEEEEEeCCCcEEEE
Confidence 3677789999999999996 89999999999999721233444554 56788999999864 7899999999999999
Q ss_pred EcCCCCcee-EEEEecCCCCCeeEEEecCC-CCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCC
Q 022111 85 KEGNQNDWT-QAHTFNDHKSSVNSIAWAPH-ELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMA 162 (302)
Q Consensus 85 d~~~~~~~~-~~~~~~~h~~~i~~l~~~pd-~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 162 (302)
++.+..... +...+.+|...|.+++|+|+ ..+.+|++|+.|+.|++||+...... ..+..+|...|.+++|+ +
T Consensus 177 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~--~~~~~~h~~~v~~~~~s-d-- 251 (450)
T 2vdu_B 177 DINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIV--DKWLFGHKHFVSSICCG-K-- 251 (450)
T ss_dssp ETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCE--EEECCCCSSCEEEEEEC-S--
T ss_pred ecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCcee--eeeecCCCCceEEEEEC-C--
Confidence 987654322 33366779999999999997 33568999999999999999754322 22234788999999998 5
Q ss_pred CCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccc-------------------------cCCCceeEEEe
Q 022111 163 PGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQ-------------------------MHSDWVRSVAW 217 (302)
Q Consensus 163 ~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~-------------------------~h~~~v~~v~~ 217 (302)
+.+|++++.|+.|+|||+.++.. +..+. .+...|.+++|
T Consensus 252 ------------~~~l~s~~~d~~v~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 315 (450)
T 2vdu_B 252 ------------DYLLLSAGGDDKIFAWDWKTGKN----LSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIK 315 (450)
T ss_dssp ------------TTEEEEEESSSEEEEEETTTCCE----EEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEE
T ss_pred ------------CCEEEEEeCCCeEEEEECCCCcE----eeeecchhhhhhhhhhcccccccccccccccceEEEEEEEE
Confidence 37899999999999999987632 11111 23457999999
Q ss_pred eCCCCCCccEEEEEe-cCCeEEEEEe--ccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecC------C-ceEEeeec
Q 022111 218 APNLGLPKSTIASAS-QDGTVVIWTC--AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADA------N-NVTLWKEA 287 (302)
Q Consensus 218 ~p~~~~~~~~l~s~s-~D~~i~iwd~--~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~------d-~i~~w~~~ 287 (302)
+|++ .+|++++ .|+.|+||++ ...........+..+ ..|++++|+|++.++++++. + .|.+|...
T Consensus 316 ~~~~----~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 316 SKNL----PFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp CSSS----SEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred eCCC----CEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 9985 7788888 8999999999 322111111222333 78999999996544444442 2 48999874
Q ss_pred -CCceEE
Q 022111 288 -VDGEWQ 293 (302)
Q Consensus 288 -~~~~~~ 293 (302)
..+.|.
T Consensus 391 ~~~~~~~ 397 (450)
T 2vdu_B 391 LNENSFV 397 (450)
T ss_dssp TTTTEEE
T ss_pred cCCCeEE
Confidence 356664
No 102
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.98 E-value=2.7e-29 Score=225.62 Aligned_cols=245 Identities=24% Similarity=0.383 Sum_probs=191.5
Q ss_pred ceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCce
Q 022111 13 TVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDW 92 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~ 92 (302)
.++.|+||+++ .||+| .|++|+|||..++....+..+.+|...|++|+|+++ |++||+|+.|++|+|||++++
T Consensus 107 y~~~l~wS~~n-~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspd--g~~lasgs~Dg~v~iWd~~~~--- 179 (420)
T 4gga_A 107 YLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKE--GNYLAVGTSSAEVQLWDVQQQ--- 179 (420)
T ss_dssp TCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTT--SSEEEEEETTSCEEEEETTTT---
T ss_pred cceeEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCC--CCEEEEEECCCeEEEEEcCCC---
Confidence 35668999754 67665 599999999876554445556788889999999864 899999999999999999775
Q ss_pred eEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccC
Q 022111 93 TQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLL 172 (302)
Q Consensus 93 ~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~ 172 (302)
..+..+.+|...+.++++++ ..|++|+.|+.+++|+...... ....+ .+|...+..+.|+|.+
T Consensus 180 ~~~~~~~~h~~~v~~~s~~~----~~l~sgs~d~~i~~~d~~~~~~-~~~~~-~~h~~~~~~~~~~~~g----------- 242 (420)
T 4gga_A 180 KRLRNMTSHSARVGSLSWNS----YILSSGSRSGHIHHHDVRVAEH-HVATL-SGHSQEVCGLRWAPDG----------- 242 (420)
T ss_dssp EEEEEECCCSSCEEEEEEET----TEEEEEETTSEEEEEETTSSSC-EEEEE-ECCSSCEEEEEECTTS-----------
T ss_pred cEEEEEeCCCCceEEEeeCC----CEEEEEeCCCceeEeeecccce-eeEEe-cccccceeeeeecCCC-----------
Confidence 46778889999999999864 4899999999999999875432 22333 3788999999999864
Q ss_pred CCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEE--EecCCeEEEEEeccCCccee
Q 022111 173 DPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIAS--ASQDGTVVIWTCAKEGEQWE 250 (302)
Q Consensus 173 ~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s--~s~D~~i~iwd~~~~~~~~~ 250 (302)
..+++++.|+.+++||...+......+.....|...|.+++|+|.. +..+++ |+.|++|++||+.....
T Consensus 243 ---~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~---~~~la~~~gs~D~~I~iwd~~t~~~--- 313 (420)
T 4gga_A 243 ---RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQ---SNVLATGGGTSDRHIRIWNVCSGAC--- 313 (420)
T ss_dssp ---SEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTC---TTEEEEEECTTTCEEEEEETTTTEE---
T ss_pred ---CeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCc---ccEEEEEeecCCCEEEEEeCCcccc---
Confidence 7899999999999999987643333455667899999999999985 356655 46899999999976421
Q ss_pred eeeeccCCCcEEEEEEccCCCEEEEec--CC-ceEEeeecCCce
Q 022111 251 GRVLKDFKTPVWSVSWSLTGNLLAVAD--AN-NVTLWKEAVDGE 291 (302)
Q Consensus 251 ~~~~~~~~~~v~~~~~spdg~~la~~~--~d-~i~~w~~~~~~~ 291 (302)
.........+.++.|+|+++.|++++ .| .|++|+......
T Consensus 314 -~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~ 356 (420)
T 4gga_A 314 -LSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK 356 (420)
T ss_dssp -EEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE
T ss_pred -ceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcE
Confidence 11123456799999999999988764 45 699999865433
No 103
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.98 E-value=1.9e-29 Score=228.07 Aligned_cols=241 Identities=24% Similarity=0.420 Sum_probs=194.6
Q ss_pred cccccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEE
Q 022111 4 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83 (302)
Q Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~i 83 (302)
.+.+.+|.+.|.. ++++++++|++|+.|++|++||+.. .+.+..+.+|.+.|++++|+ +++|++|+.|++|++
T Consensus 111 ~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~--~~~~~~~~~h~~~v~~~~~~----~~~l~s~~~dg~i~v 183 (445)
T 2ovr_B 111 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVT--GKCLRTLVGHTGGVWSSQMR----DNIIISGSTDRTLKV 183 (445)
T ss_dssp CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTT--CCEEEECCCCSSCEEEEEEE----TTEEEEEETTSCEEE
T ss_pred eEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCC--CcEEEEEcCCCCCEEEEEec----CCEEEEEeCCCeEEE
Confidence 3456789987643 3566799999999999999999865 35677889999999999996 469999999999999
Q ss_pred EEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCC
Q 022111 84 WKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAP 163 (302)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 163 (302)
||+.++ .....+.+|...|.++.|++ ..+++|+.|+.|++||+.+... ...+ ..|...+.++.|.
T Consensus 184 wd~~~~---~~~~~~~~h~~~v~~~~~~~----~~l~s~s~dg~i~~wd~~~~~~--~~~~-~~~~~~v~~~~~~----- 248 (445)
T 2ovr_B 184 WNAETG---ECIHTLYGHTSTVRCMHLHE----KRVVSGSRDATLRVWDIETGQC--LHVL-MGHVAAVRCVQYD----- 248 (445)
T ss_dssp EETTTT---EEEEEECCCSSCEEEEEEET----TEEEEEETTSEEEEEESSSCCE--EEEE-ECCSSCEEEEEEC-----
T ss_pred EECCcC---cEEEEECCCCCcEEEEEecC----CEEEEEeCCCEEEEEECCCCcE--EEEE-cCCcccEEEEEEC-----
Confidence 999775 46778889999999999974 3799999999999999875432 2233 3788899999883
Q ss_pred CceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEec
Q 022111 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCA 243 (302)
Q Consensus 164 ~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~ 243 (302)
+..|++|+.|+.|++||++++ .++..+.+|...|.+++| + +..+++++.|+.|++||++
T Consensus 249 -----------~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~v~~~~~--~----~~~l~~~~~d~~i~i~d~~ 307 (445)
T 2ovr_B 249 -----------GRRVVSGAYDFMVKVWDPETE----TCLHTLQGHTNRVYSLQF--D----GIHVVSGSLDTSIRVWDVE 307 (445)
T ss_dssp -----------SSCEEEEETTSCEEEEEGGGT----EEEEEECCCSSCEEEEEE--C----SSEEEEEETTSCEEEEETT
T ss_pred -----------CCEEEEEcCCCEEEEEECCCC----cEeEEecCCCCceEEEEE--C----CCEEEEEeCCCeEEEEECC
Confidence 368999999999999999876 455677889999999999 3 3689999999999999997
Q ss_pred cCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCceE
Q 022111 244 KEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEW 292 (302)
Q Consensus 244 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~~ 292 (302)
.... ......+...+.++++ ++++|++++.| .|++|+.......
T Consensus 308 ~~~~---~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~ 352 (445)
T 2ovr_B 308 TGNC---IHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCL 352 (445)
T ss_dssp TCCE---EEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEE
T ss_pred CCCE---EEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEE
Confidence 6432 2234567777887776 56799999888 7999998654433
No 104
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.98 E-value=2.1e-30 Score=225.33 Aligned_cols=239 Identities=14% Similarity=0.191 Sum_probs=188.7
Q ss_pred ccccccceeEEEEccCCC-EEEEeeCCCcEEEEee-cCCCceEEEEecC--cccCeEEEEeeCCCCCCEEEEEeCCCeEE
Q 022111 7 ETGHEDTVHDVAMDFYGK-RLATASSDSSIKIIGL-SNSASQHLATLKG--HRGPVWQVAWAHPKFGSILASCSYDGQVI 82 (302)
Q Consensus 7 ~~~h~~~v~~~~~s~~~~-~l~s~~~d~~v~lw~~-~~~~~~~~~~~~~--h~~~v~~v~~~~~~~~~~l~s~s~D~~i~ 82 (302)
..+|...|++++|+++++ +|++|+.|+.|++|++ .... ...+.+ |...|.+++|++ +++|++++.|+.|+
T Consensus 52 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~---~~~~~~~~~~~~v~~l~~~~---~~~l~s~~~d~~i~ 125 (342)
T 1yfq_A 52 SLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS---FQALTNNEANLGICRICKYG---DDKLIAASWDGLIE 125 (342)
T ss_dssp EEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS---EEECBSCCCCSCEEEEEEET---TTEEEEEETTSEEE
T ss_pred eeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc---eEeccccCCCCceEEEEeCC---CCEEEEEcCCCeEE
Confidence 448999999999999999 9999999999999998 6543 356778 999999999985 68999999999999
Q ss_pred EEEcCCCCc------eeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecC-CCCeeeeeecccCCCCeEEE
Q 022111 83 IWKEGNQND------WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA-DGGWDTTRIDQAHPVGVTSV 155 (302)
Q Consensus 83 iwd~~~~~~------~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~-~~~~~~~~~~~~h~~~v~~~ 155 (302)
+||++.... ..++..+. |...|.+++|+|+ + +++++.|+.|++||++. ... ........|...+.++
T Consensus 126 iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~--~--l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~i~~i 199 (342)
T 1yfq_A 126 VIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSS--R--LIVGMNNSQVQWFRLPLCEDD-NGTIEESGLKYQIRDV 199 (342)
T ss_dssp EECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSS--E--EEEEESTTEEEEEESSCCTTC-CCEEEECSCSSCEEEE
T ss_pred EEcccccccccccccCCeeeEEe-eCCceEEEEecCC--c--EEEEeCCCeEEEEECCccccc-cceeeecCCCCceeEE
Confidence 999864000 12344455 8899999999986 2 99999999999999976 322 1222233678889999
Q ss_pred EeCC-CCCCCceeecccCCCceeEEEeeCCCcEEEEEEecC--ccccccccccccCCC---------ceeEEEeeCCCCC
Q 022111 156 SWAP-AMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNG--IWKMDCFPALQMHSD---------WVRSVAWAPNLGL 223 (302)
Q Consensus 156 ~~~~-~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~--~~~~~~~~~~~~h~~---------~v~~v~~~p~~~~ 223 (302)
+|+| ++ ..|++++.|+.|++||+... .........+.+|.. .|.+++|+|++
T Consensus 200 ~~~~~~~--------------~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-- 263 (342)
T 1yfq_A 200 ALLPKEQ--------------EGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH-- 263 (342)
T ss_dssp EECSGGG--------------CEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT--
T ss_pred EECCCCC--------------CEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCC--
Confidence 9998 63 78999999999999999765 111123344555644 99999999985
Q ss_pred CccEEEEEecCCeEEEEEeccCCcceeeeeeccC-CCcEEEEEEccCCCEEEEecCCc
Q 022111 224 PKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDF-KTPVWSVSWSLTGNLLAVADANN 280 (302)
Q Consensus 224 ~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~-~~~v~~~~~spdg~~la~~~~d~ 280 (302)
.+|++++.|+.|++||++.... ...+..+ ..+|.+++ |+|++|++++.|+
T Consensus 264 --~~l~~~~~dg~i~vwd~~~~~~---~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 264 --KFLYTAGSDGIISCWNLQTRKK---IKNFAKFNEDSVVKIA--CSDNILCLATSDD 314 (342)
T ss_dssp --CCEEEEETTSCEEEEETTTTEE---EEECCCCSSSEEEEEE--ECSSEEEEEEECT
T ss_pred --CEEEEecCCceEEEEcCccHhH---hhhhhcccCCCceEec--CCCCeEEEEecCC
Confidence 6799999999999999975421 2234566 88899999 9999999998884
No 105
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.98 E-value=1e-29 Score=237.61 Aligned_cols=249 Identities=13% Similarity=0.220 Sum_probs=199.3
Q ss_pred cccccccccc-eeEEEEcc--CCCEEEEeeCCCcEEEEeecCC------CceEEEEecCcccCeEEEEeeCCCCCCEEEE
Q 022111 4 QKIETGHEDT-VHDVAMDF--YGKRLATASSDSSIKIIGLSNS------ASQHLATLKGHRGPVWQVAWAHPKFGSILAS 74 (302)
Q Consensus 4 ~~~~~~h~~~-v~~~~~s~--~~~~l~s~~~d~~v~lw~~~~~------~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s 74 (302)
...+.+|... |++++|+| ++++||+++.|++|++|++... ..+....+.+|...|.+++|+++ +++|++
T Consensus 56 ~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~ 133 (615)
T 1pgu_A 56 VVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFE--GRRLCV 133 (615)
T ss_dssp EEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTT--SSEEEE
T ss_pred ceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCC--CCEEEE
Confidence 3446789999 99999999 9999999999999999999643 23556778889999999999864 889999
Q ss_pred EeCC----CeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCC
Q 022111 75 CSYD----GQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPV 150 (302)
Q Consensus 75 ~s~D----~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~ 150 (302)
++.| +.|.+||. . .....+.+|...|.+++|+|+. ..++++++.|+.|++||..... ....+. .|..
T Consensus 134 ~~~~~~~~~~v~~~d~--~---~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~v~vwd~~~~~--~~~~~~-~~~~ 204 (615)
T 1pgu_A 134 VGEGRDNFGVFISWDS--G---NSLGEVSGHSQRINACHLKQSR-PMRSMTVGDDGSVVFYQGPPFK--FSASDR-THHK 204 (615)
T ss_dssp EECCSSCSEEEEETTT--C---CEEEECCSCSSCEEEEEECSSS-SCEEEEEETTTEEEEEETTTBE--EEEEEC-SSSC
T ss_pred eccCCCCccEEEEEEC--C---CcceeeecCCccEEEEEECCCC-CcEEEEEeCCCcEEEEeCCCcc--eeeeec-ccCC
Confidence 9988 68999983 2 2567788999999999999983 2379999999999999976432 223333 6777
Q ss_pred ---CeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcccccccccc-c---cCCCceeEEEeeCCCCC
Q 022111 151 ---GVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPAL-Q---MHSDWVRSVAWAPNLGL 223 (302)
Q Consensus 151 ---~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~-~---~h~~~v~~v~~~p~~~~ 223 (302)
.|.+++|+|+. +.+|++++.|+.|++||+.++. .+..+ . +|...|.+++|+ ++
T Consensus 205 ~~~~v~~~~~~~~~-------------~~~l~~~~~dg~i~vwd~~~~~----~~~~~~~~~~~~~~~v~~~~~~-~~-- 264 (615)
T 1pgu_A 205 QGSFVRDVEFSPDS-------------GEFVITVGSDRKISCFDGKSGE----FLKYIEDDQEPVQGGIFALSWL-DS-- 264 (615)
T ss_dssp TTCCEEEEEECSTT-------------CCEEEEEETTCCEEEEETTTCC----EEEECCBTTBCCCSCEEEEEES-SS--
T ss_pred CCceEEEEEECCCC-------------CCEEEEEeCCCeEEEEECCCCC----EeEEecccccccCCceEEEEEc-CC--
Confidence 89999999861 3789999999999999998763 33445 4 899999999999 64
Q ss_pred CccEEEEEecCCeEEEEEeccCCcceeeeee---ccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecC
Q 022111 224 PKSTIASASQDGTVVIWTCAKEGEQWEGRVL---KDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAV 288 (302)
Q Consensus 224 ~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~---~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~ 288 (302)
..|++++.|+.|++||++..... ..+. ......+.++.|+ ++++|++++.+ .|++|+...
T Consensus 265 --~~l~~~~~d~~i~~wd~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~ 328 (615)
T 1pgu_A 265 --QKFATVGADATIRVWDVTTSKCV--QKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGH 328 (615)
T ss_dssp --SEEEEEETTSEEEEEETTTTEEE--EEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTE
T ss_pred --CEEEEEcCCCcEEEEECCCCcEE--EEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCC
Confidence 78999999999999999754211 1111 1123568889996 88999999888 799999764
No 106
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.98 E-value=8e-30 Score=224.32 Aligned_cols=248 Identities=16% Similarity=0.189 Sum_probs=173.5
Q ss_pred ccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEE-EEEeCCCeEEEEE
Q 022111 7 ETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSIL-ASCSYDGQVIIWK 85 (302)
Q Consensus 7 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l-~s~s~D~~i~iwd 85 (302)
..+|...|++++|+|||++||+|+.|+ +++|+... .+..... +...+..+++.+. ++.+ ++++.|++|++||
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~--~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHP--VAHIMSQ--EMRHLSKVRMLHR--TNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSSE-EEEEEETT--EEEEEEE--ECSCCCEEEECTT--SSEEEEECSSTTEEEEEE
T ss_pred cccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCC--cceeeee--ecCCeEEEEEcCC--CCEEEEEECCccEEEEEE
Confidence 468999999999999999999888665 78999864 3333222 2224667777653 4555 6778899999999
Q ss_pred cCCCCceeEEEEecCCCCCeeEEEecCCC---------------CC------------------cEEEE--EecCCcEEE
Q 022111 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHE---------------LG------------------LSLAC--GSSDGNISV 130 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~i~~l~~~pd~---------------~~------------------~~l~s--g~~d~~v~~ 130 (302)
..++. ++..+. +..+|.+++|+++. .+ ..++. |+.|+.|++
T Consensus 88 ~~~~~---~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~i 163 (355)
T 3vu4_A 88 DVKKQ---DVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHI 163 (355)
T ss_dssp TTTTE---EEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEE
T ss_pred CCCCc---EEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEE
Confidence 87653 455555 66788888887741 00 12233 567777777
Q ss_pred EEecCCCCe-------------e-eeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCc-EEEEEEecC
Q 022111 131 FTATADGGW-------------D-TTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNT-VKVWKMYNG 195 (302)
Q Consensus 131 ~~~~~~~~~-------------~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~-v~iwd~~~~ 195 (302)
||+...... . ...+ .+|...|++++|+|+ +.+|++|+.|++ |+|||++++
T Consensus 164 wd~~~~~~~~~~~~~~~~~~~~p~~~~~-~~h~~~v~~~~~s~~--------------g~~l~s~s~d~~~v~iwd~~~~ 228 (355)
T 3vu4_A 164 TKLQSSGSATTQDQGVQQKAILGKGVLI-KAHTNPIKMVRLNRK--------------SDMVATCSQDGTIIRVFKTEDG 228 (355)
T ss_dssp EECCC------------------CCEEE-CCCSSCEEEEEECTT--------------SSEEEEEETTCSEEEEEETTTC
T ss_pred EECCCCCccccccccccccccCcccEEE-EccCCceEEEEECCC--------------CCEEEEEeCCCCEEEEEECCCC
Confidence 777643200 0 1223 378999999999986 479999999998 999999876
Q ss_pred ccccccccccc-c-CCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeee--------------------e
Q 022111 196 IWKMDCFPALQ-M-HSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGR--------------------V 253 (302)
Q Consensus 196 ~~~~~~~~~~~-~-h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~--------------------~ 253 (302)
.++..+. + |...|++++|+|++ ++|++++.|++|+|||++......... +
T Consensus 229 ----~~~~~~~~g~h~~~v~~~~~s~~~----~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (355)
T 3vu4_A 229 ----VLVREFRRGLDRADVVDMKWSTDG----SKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKL 300 (355)
T ss_dssp ----CEEEEEECTTCCSCEEEEEECTTS----CEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEEC
T ss_pred ----cEEEEEEcCCCCCcEEEEEECCCC----CEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEe
Confidence 3455666 5 99999999999995 789999999999999997532110000 0
Q ss_pred eccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecC
Q 022111 254 LKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAV 288 (302)
Q Consensus 254 ~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~ 288 (302)
......+...++|+|||++|++++.| .+++|+...
T Consensus 301 ~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 301 SVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp CCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred ccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 00111234679999999999999888 699998643
No 107
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=9.6e-31 Score=238.03 Aligned_cols=239 Identities=14% Similarity=0.153 Sum_probs=182.0
Q ss_pred cccceeEEEEccCCCEEEEeeCCCcEEEEeecCCC---------------------------ceEEEEec-CcccCeEEE
Q 022111 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSA---------------------------SQHLATLK-GHRGPVWQV 61 (302)
Q Consensus 10 h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~---------------------------~~~~~~~~-~h~~~v~~v 61 (302)
-+..|.+++|+|||+++||++.|++|+ |..... .+....+. .|+..|.++
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~v 91 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVC 91 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEE
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEE
Confidence 457899999999999999999999996 321110 00001122 567889999
Q ss_pred EeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCCC-----CeeEEEecCCCCCcEEEEEecCCcEEEEEecCC
Q 022111 62 AWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKS-----SVNSIAWAPHELGLSLACGSSDGNISVFTATAD 136 (302)
Q Consensus 62 ~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~-----~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~ 136 (302)
+|+|+ |++||+++.||++++||.+. .+..+. |.. .|.+++|||| |++||+|+.||+|++|++...
T Consensus 92 awSPd--G~~LAs~s~dg~V~iwd~~~-----~l~~l~-~~~~~~~~sv~svafSPD--G~~LAsgs~DGtVkIWd~~~~ 161 (588)
T 2j04_A 92 KPSPI--DDWMAVLSNNGNVSVFKDNK-----MLTNLD-SKGNLSSRTYHCFEWNPI--ESSIVVGNEDGELQFFSIRKN 161 (588)
T ss_dssp EECSS--SSCEEEEETTSCEEEEETTE-----EEEECC-CSSCSTTTCEEEEEECSS--SSCEEEEETTSEEEEEECCCC
T ss_pred EECCC--CCEEEEEeCCCcEEEEeCCc-----eeeecc-CCCccccccEEEEEEcCC--CCEEEEEcCCCEEEEEECCCC
Confidence 99874 89999999999999999532 556666 665 4999999998 779999999999999998754
Q ss_pred CC-----eeeeee---cccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcccccccccc-cc
Q 022111 137 GG-----WDTTRI---DQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPAL-QM 207 (302)
Q Consensus 137 ~~-----~~~~~~---~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~-~~ 207 (302)
.. .....+ ..+|...|.+++|+|+ . +++++.|++|++||+.++... ...+++ .+
T Consensus 162 ~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd---------------g-Laass~D~tVrlWd~~~~~~~-~~~~tL~~~ 224 (588)
T 2j04_A 162 SENTPEFYFESSIRLSDAGSKDWVTHIVWYED---------------V-LVAALSNNSVFSMTVSASSHQ-PVSRMIQNA 224 (588)
T ss_dssp TTTCCCCEEEEEEECSCTTCCCCEEEEEEETT---------------E-EEEEETTCCEEEECCCSSSSC-CCEEEEECC
T ss_pred ccccccceeeeeeecccccccccEEEEEEcCC---------------c-EEEEeCCCeEEEEECCCCccc-cceeeeccc
Confidence 21 012233 1468889999999985 4 889999999999999875311 112345 47
Q ss_pred CCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEE--ccCCCEEEEecCCceEEee
Q 022111 208 HSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSW--SLTGNLLAVADANNVTLWK 285 (302)
Q Consensus 208 h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~--spdg~~la~~~~d~i~~w~ 285 (302)
|...|.+++|+ + +.||+++ +++|++||+..... .....+|...|++++| +||+..|++|+.++.++|.
T Consensus 225 h~~~V~svaFs-g-----~~LASa~-~~tIkLWd~~~~~~---~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~klw~ 294 (588)
T 2j04_A 225 SRRKITDLKIV-D-----YKVVLTC-PGYVHKIDLKNYSI---SSLKTGSLENFHIIPLNHEKESTILLMSNKTSYKVLL 294 (588)
T ss_dssp CSSCCCCEEEE-T-----TEEEEEC-SSEEEEEETTTTEE---EEEECSCCSCCCEEEETTCSSCEEEEECSSCEEEEEE
T ss_pred ccCcEEEEEEE-C-----CEEEEEe-CCeEEEEECCCCeE---EEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCCEEEe
Confidence 88999999999 3 5788887 69999999875321 1233378889999999 9999999999988449998
Q ss_pred ec
Q 022111 286 EA 287 (302)
Q Consensus 286 ~~ 287 (302)
..
T Consensus 295 ~d 296 (588)
T 2j04_A 295 ED 296 (588)
T ss_dssp SS
T ss_pred ec
Confidence 64
No 108
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=7.8e-29 Score=224.00 Aligned_cols=242 Identities=19% Similarity=0.314 Sum_probs=194.9
Q ss_pred cccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
.+.+|...|++++|+ +++|++|+.|++|++||+.. .+.+..+.+|...|.+++|. +++|++|+.|++|++||
T Consensus 154 ~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~--~~~~~~~~~h~~~v~~~~~~----~~~l~s~s~dg~i~~wd 225 (445)
T 2ovr_B 154 TLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAET--GECIHTLYGHTSTVRCMHLH----EKRVVSGSRDATLRVWD 225 (445)
T ss_dssp ECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEEE----TTEEEEEETTSEEEEEE
T ss_pred EEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCc--CcEEEEECCCCCcEEEEEec----CCEEEEEeCCCEEEEEE
Confidence 466899999999987 67999999999999999865 45678889999999999995 46899999999999999
Q ss_pred cCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCc
Q 022111 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 165 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 165 (302)
+++.. ....+.+|...|.+++|. +..+++|+.|+.|++||..... ....+. .|...+.++.|.
T Consensus 226 ~~~~~---~~~~~~~~~~~v~~~~~~----~~~l~~~~~dg~i~iwd~~~~~--~~~~~~-~~~~~v~~~~~~------- 288 (445)
T 2ovr_B 226 IETGQ---CLHVLMGHVAAVRCVQYD----GRRVVSGAYDFMVKVWDPETET--CLHTLQ-GHTNRVYSLQFD------- 288 (445)
T ss_dssp SSSCC---EEEEEECCSSCEEEEEEC----SSCEEEEETTSCEEEEEGGGTE--EEEEEC-CCSSCEEEEEEC-------
T ss_pred CCCCc---EEEEEcCCcccEEEEEEC----CCEEEEEcCCCEEEEEECCCCc--EeEEec-CCCCceEEEEEC-------
Confidence 97753 567788899999999993 4589999999999999987542 223333 788889999883
Q ss_pred eeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccC
Q 022111 166 LVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKE 245 (302)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~ 245 (302)
+..|++++.|+.|++||++++ .++..+.+|...+.++++++ +.|++|+.|+.|++||++..
T Consensus 289 ---------~~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~v~~~~~~~------~~l~~~~~dg~i~vwd~~~~ 349 (445)
T 2ovr_B 289 ---------GIHVVSGSLDTSIRVWDVETG----NCIHTLTGHQSLTSGMELKD------NILVSGNADSTVKIWDIKTG 349 (445)
T ss_dssp ---------SSEEEEEETTSCEEEEETTTC----CEEEEECCCCSCEEEEEEET------TEEEEEETTSCEEEEETTTC
T ss_pred ---------CCEEEEEeCCCeEEEEECCCC----CEEEEEcCCcccEEEEEEeC------CEEEEEeCCCeEEEEECCCC
Confidence 368999999999999999876 34567788999999998864 57999999999999999764
Q ss_pred CcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCceEE
Q 022111 246 GEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQ 293 (302)
Q Consensus 246 ~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~~~ 293 (302)
...........+..+|.+++|+ +++|++++.| .|++|+........
T Consensus 350 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 350 QCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIR 396 (445)
T ss_dssp CEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEE
T ss_pred cEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceee
Confidence 3211101112367789999995 5799999888 79999986544433
No 109
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.2e-30 Score=234.60 Aligned_cols=233 Identities=12% Similarity=0.114 Sum_probs=176.8
Q ss_pred ccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCccc-----CeEEEEeeCCCCCCEEEEEeCCCeEEE
Q 022111 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRG-----PVWQVAWAHPKFGSILASCSYDGQVII 83 (302)
Q Consensus 9 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~-----~v~~v~~~~~~~~~~l~s~s~D~~i~i 83 (302)
+|.+.|++++|||+|++||+++.||+|+||+... .+..+. |.. .|.+++|+|+ |++||+|+.||+|+|
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSPD--G~~LAsgs~DGtVkI 155 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNPI--ESSIVVGNEDGELQF 155 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE----EEEECC-CSSCSTTTCEEEEEECSS--SSCEEEEETTSEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc----eeeecc-CCCccccccEEEEEEcCC--CCEEEEEcCCCEEEE
Confidence 6788999999999999999999999999999532 555666 665 4999999875 899999999999999
Q ss_pred EEcCCCCce----eEEEEe----cCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCee-eeeecccCCCCeEE
Q 022111 84 WKEGNQNDW----TQAHTF----NDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWD-TTRIDQAHPVGVTS 154 (302)
Q Consensus 84 wd~~~~~~~----~~~~~~----~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~-~~~~~~~h~~~v~~ 154 (302)
||+.++... -.+.++ .+|...|.+++|+|| | +++++.|++|++|++....... ...+..+|...|.+
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd--g--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s 231 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYED--V--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITD 231 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETT--E--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCC
T ss_pred EECCCCccccccceeeeeeecccccccccEEEEEEcCC--c--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEE
Confidence 999765310 134555 678899999999998 6 8888999999999986543211 12232367788999
Q ss_pred EEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEe--eCCCCCCccEEEEEe
Q 022111 155 VSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAW--APNLGLPKSTIASAS 232 (302)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~--~p~~~~~~~~l~s~s 232 (302)
++|+ . +.||+++ +++|++||+.++... ....+|.+.|.+++| +|++ ..|++++
T Consensus 232 vaFs-g---------------~~LASa~-~~tIkLWd~~~~~~~----~~~~gh~~~V~~va~~~s~d~----~~La~a~ 286 (588)
T 2j04_A 232 LKIV-D---------------YKVVLTC-PGYVHKIDLKNYSIS----SLKTGSLENFHIIPLNHEKES----TILLMSN 286 (588)
T ss_dssp EEEE-T---------------TEEEEEC-SSEEEEEETTTTEEE----EEECSCCSCCCEEEETTCSSC----EEEEECS
T ss_pred EEEE-C---------------CEEEEEe-CCeEEEEECCCCeEE----EEEcCCCceEEEEEeeeCCCC----CEEEEEc
Confidence 9997 2 5788887 699999998875311 112379999999999 9985 7899999
Q ss_pred cCCeEEEEEeccC----Cc-----------ceee--eeec--cCCCcEEEEEEccCCCEEEEecC
Q 022111 233 QDGTVVIWTCAKE----GE-----------QWEG--RVLK--DFKTPVWSVSWSLTGNLLAVADA 278 (302)
Q Consensus 233 ~D~~i~iwd~~~~----~~-----------~~~~--~~~~--~~~~~v~~~~~spdg~~la~~~~ 278 (302)
+||+ |+|..+.- .. .|.. .... +....|++++|||||+.+|+++.
T Consensus 287 edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 287 KTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp SCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEEEE
T ss_pred CCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCCEEEEEEe
Confidence 9999 99997421 00 0100 0000 11234899999999999999865
No 110
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=3.5e-28 Score=209.00 Aligned_cols=246 Identities=24% Similarity=0.366 Sum_probs=188.6
Q ss_pred eeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCcee
Q 022111 14 VHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWT 93 (302)
Q Consensus 14 v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~ 93 (302)
++.|+||+++ +||+| .|++|+|||+.++.......+.+|...|++++|+++ +++|++|+.|++|++||++++ .
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~--~~~l~sgs~Dg~v~iw~~~~~---~ 100 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKE--GNYLAVGTSSAEVQLWDVQQQ---K 100 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTT--SSEEEEEETTSEEEEEETTTT---E
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCC--CCEEEEEECCCcEEEeecCCc---e
Confidence 5678999876 66665 699999999876544344455678889999999864 899999999999999999876 4
Q ss_pred EEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCC
Q 022111 94 QAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLD 173 (302)
Q Consensus 94 ~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~ 173 (302)
.+..+.+|...+.++.+.+ ..+++++.++.+++|+...... ....+ .+|...+..+.+.+.
T Consensus 101 ~~~~~~~h~~~~~~~~~~~----~~l~s~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~------------- 161 (318)
T 4ggc_A 101 RLRNMTSHSARVGSLSWNS----YILSSGSRSGHIHHHDVRVAEH-HVATL-SGHSQEVCGLRWAPD------------- 161 (318)
T ss_dssp EEEEEECCSSCEEEEEEET----TEEEEEETTSEEEEEETTSSSC-EEEEE-ECCSSCEEEEEECTT-------------
T ss_pred eEEEecCccceEEEeecCC----CEEEEEecCCceEeeecCCCce-eEEEE-cCccCceEEEEEcCC-------------
Confidence 6778889999998887754 4899999999999998764432 22333 378888999999875
Q ss_pred CceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeee
Q 022111 174 PVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRV 253 (302)
Q Consensus 174 ~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~ 253 (302)
+.+|++++.|++|++||+.++............|.+.|.+++++|+... .-.+++++.+++|++||.+.... ..
T Consensus 162 -~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~i~lwd~~~~~~----~~ 235 (318)
T 4ggc_A 162 -GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSN-VLATGGGTSDRHIRIWNVCSGAC----LS 235 (318)
T ss_dssp -SSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTT-EEEEEECTTTCEEEEEETTTCCE----EE
T ss_pred -CCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCc-EEEEEecCCCCEEEEEecccccc----cc
Confidence 3789999999999999998764333334455678899999999997521 12346778899999999875432 22
Q ss_pred eccCCCcEEEEEEccCCCEEEEec--CC-ceEEeeecCCce
Q 022111 254 LKDFKTPVWSVSWSLTGNLLAVAD--AN-NVTLWKEAVDGE 291 (302)
Q Consensus 254 ~~~~~~~v~~~~~spdg~~la~~~--~d-~i~~w~~~~~~~ 291 (302)
...+...+..+.|+|+++.+++++ .| .|++|+......
T Consensus 236 ~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~ 276 (318)
T 4ggc_A 236 AVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK 276 (318)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE
T ss_pred cccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcE
Confidence 234567799999999998887664 45 699999865443
No 111
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.6e-30 Score=250.33 Aligned_cols=267 Identities=13% Similarity=0.101 Sum_probs=193.9
Q ss_pred cccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCce--EEEE--ec-----CcccCeEEEEeeCCCCCCEEEEEe
Q 022111 6 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQ--HLAT--LK-----GHRGPVWQVAWAHPKFGSILASCS 76 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~--~~~~--~~-----~h~~~v~~v~~~~~~~~~~l~s~s 76 (302)
.+.||...+.+++|+|++++||||+.|++||+||+..+... .... +. +|...|++|+|+|+ +++||+|+
T Consensus 430 ~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspd--g~~LAsgs 507 (902)
T 2oaj_A 430 LLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAE--TLELAVSI 507 (902)
T ss_dssp SCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETT--TTEEEEEE
T ss_pred cccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCC--CCeEEEEe
Confidence 45688888888899999999999999999999998654211 1111 22 89999999999975 89999999
Q ss_pred CCCeEEEEEcCCCCc------------------------------------------eeEEEEecCCCCCeeEEEecCCC
Q 022111 77 YDGQVIIWKEGNQND------------------------------------------WTQAHTFNDHKSSVNSIAWAPHE 114 (302)
Q Consensus 77 ~D~~i~iwd~~~~~~------------------------------------------~~~~~~~~~h~~~i~~l~~~pd~ 114 (302)
.|++|+|||+.+... ..++.++.+|.+.|++|+|+||
T Consensus 508 ~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpd- 586 (902)
T 2oaj_A 508 ETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNI- 586 (902)
T ss_dssp TTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBT-
T ss_pred cCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCC-
Confidence 999999999865421 1346778889999999999998
Q ss_pred CCcEEEEEecCCcEEEEEecCCCCeeeeee--c-ccCCCCeEEEEeC-----CCCCCCceeecccCCCceeEEEeeCCCc
Q 022111 115 LGLSLACGSSDGNISVFTATADGGWDTTRI--D-QAHPVGVTSVSWA-----PAMAPGALVGLGLLDPVQKLASCGCDNT 186 (302)
Q Consensus 115 ~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~--~-~~h~~~v~~~~~~-----~~~~~~~~~~~~~~~~~~~l~s~~~D~~ 186 (302)
| +||+|+.|++|+|||+..........+ . .+|...|++++|+ |++. ++..|++|+.|++
T Consensus 587 -G-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~-----------~~~~l~sgs~D~t 653 (902)
T 2oaj_A 587 -G-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGY-----------SSILMVCGTDMGE 653 (902)
T ss_dssp -S-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSS-----------EEEEEEEEETTSE
T ss_pred -c-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCC-----------cceEEEEEecCCc
Confidence 7 999999999999999753211110111 1 2788899999999 6531 2478999999999
Q ss_pred EEEEEE---ecCccccccccccccC-----CCceeEEE-eeCCCC------------------CCccEEEEEecCCeEEE
Q 022111 187 VKVWKM---YNGIWKMDCFPALQMH-----SDWVRSVA-WAPNLG------------------LPKSTIASASQDGTVVI 239 (302)
Q Consensus 187 v~iwd~---~~~~~~~~~~~~~~~h-----~~~v~~v~-~~p~~~------------------~~~~~l~s~s~D~~i~i 239 (302)
|++||+ .++. +...+.+| .++|.+++ |+.+.+ .++..|+++ +..|||
T Consensus 654 v~~wd~~p~~~g~----~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~--~~~ir~ 727 (902)
T 2oaj_A 654 VITYKILPASGGK----FDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG--FDDIRL 727 (902)
T ss_dssp EEEEEEEECGGGC----EEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC--SSEEEE
T ss_pred EEEEEEecCCCCc----EEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe--ccceEE
Confidence 999999 4442 33344444 57888887 662211 112333333 778999
Q ss_pred EEeccCCcceeeeeeccCCCcEEEE---E------EccCCCEEEEecCC-ceEEeeecCCceEEEeee
Q 022111 240 WTCAKEGEQWEGRVLKDFKTPVWSV---S------WSLTGNLLAVADAN-NVTLWKEAVDGEWQQVSV 297 (302)
Q Consensus 240 wd~~~~~~~~~~~~~~~~~~~v~~~---~------~spdg~~la~~~~d-~i~~w~~~~~~~~~~~~~ 297 (302)
|++.+.+. .... .++...+.++ + |+++|..|++...+ .|++|+...-+.......
T Consensus 728 ~~~~~~k~--~~k~-~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~s~p~l~~~~~~~~ 792 (902)
T 2oaj_A 728 ITLGKSKS--THKG-FKYPLAATGLSYISTVEKNNDRKNLTVIITLEINGHLRVFTIPDFKEQMSEHI 792 (902)
T ss_dssp ECTTCCCE--EEEE-CSSCEEEEEEEEEEEECSSSCEEEEEEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EeCccccc--eeeE-cccceeeeEEEEEEeccccccccCceEEEEEeCCCcEEEEECcchHHHhhccC
Confidence 99876421 1122 3334556666 6 88999999999998 799999876665555443
No 112
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=4.9e-29 Score=215.86 Aligned_cols=224 Identities=21% Similarity=0.351 Sum_probs=172.9
Q ss_pred ccccccceeEEEEcc--CCCEEEEeeCCCcEEEEeecCCCc-------eEEEEecCcccCeEEEEeeCCCCCCEEEEEeC
Q 022111 7 ETGHEDTVHDVAMDF--YGKRLATASSDSSIKIIGLSNSAS-------QHLATLKGHRGPVWQVAWAHPKFGSILASCSY 77 (302)
Q Consensus 7 ~~~h~~~v~~~~~s~--~~~~l~s~~~d~~v~lw~~~~~~~-------~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~ 77 (302)
+.+|...|++++|++ ++++|++++.|++|++||+..... +.+..+.+|...|.+++|+++..+++|++++.
T Consensus 53 ~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 132 (351)
T 3f3f_A 53 WRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN 132 (351)
T ss_dssp EECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred eccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC
Confidence 458999999999999 699999999999999999965321 45677889999999999986422789999999
Q ss_pred CCeEEEEEcCCCCceeE------EE----EecCCCCCeeEEEecCCC-CCcEEEEEecCCcEEEEEecCCCCeeeeeecc
Q 022111 78 DGQVIIWKEGNQNDWTQ------AH----TFNDHKSSVNSIAWAPHE-LGLSLACGSSDGNISVFTATADGGWDTTRIDQ 146 (302)
Q Consensus 78 D~~i~iwd~~~~~~~~~------~~----~~~~h~~~i~~l~~~pd~-~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~ 146 (302)
|+.|++||+++...... .. ....|...+.+++|+|+. .+..+++++.++.+.+|+.... .........
T Consensus 133 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~ 211 (351)
T 3f3f_A 133 DGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDG-KLHVAAKLP 211 (351)
T ss_dssp TCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTS-CEEEEEECC
T ss_pred CCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCC-ceeeeeecC
Confidence 99999999876532110 01 112578899999999962 2458999999999977665433 332222223
Q ss_pred cCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcc-----------------------------
Q 022111 147 AHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIW----------------------------- 197 (302)
Q Consensus 147 ~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~----------------------------- 197 (302)
+|...|.+++|+|++.. ...+|++|+.|+.|++||++.+..
T Consensus 212 ~h~~~i~~~~~~p~~~~----------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (351)
T 3f3f_A 212 GHKSLIRSISWAPSIGR----------WYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSD 281 (351)
T ss_dssp CCCSCEEEEEECCCSSC----------SSEEEEEEETTSCEEEEEEEECC------------------------------
T ss_pred CCCcceeEEEECCCCCC----------cceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccc
Confidence 78999999999986310 016899999999999999986411
Q ss_pred -------------ccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccC
Q 022111 198 -------------KMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKE 245 (302)
Q Consensus 198 -------------~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~ 245 (302)
....+..+.+|...|++++|+|++ .+|++++.|+.|+|||+...
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~----~~l~s~~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 282 SNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTG----TILSSAGDDGKVRLWKATYS 338 (351)
T ss_dssp ---------CCSEEEEEEEEECTTSSCEEEEEECSSS----CCEEEEETTSCEEEEEECTT
T ss_pred cccceeeeecccccccEEEEEecccccEEEEEEcCCC----CEEEEecCCCcEEEEecCcC
Confidence 113445677899999999999985 68999999999999999754
No 113
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.3e-29 Score=239.03 Aligned_cols=223 Identities=24% Similarity=0.336 Sum_probs=178.7
Q ss_pred cccccccceeEEEEccC--CCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEE
Q 022111 6 IETGHEDTVHDVAMDFY--GKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~--~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~i 83 (302)
.+.+|.+.|++++|+++ +++|++|+.||+|++||+.......+..+.+|...|++++|+++..++++++|+.|++|++
T Consensus 48 ~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~v 127 (753)
T 3jro_A 48 TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSV 127 (753)
T ss_dssp EECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred eccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEE
Confidence 46689999999999988 8999999999999999998754446777889999999999986422789999999999999
Q ss_pred EEcCCCCceeEEEEecCCCCCeeEEEecCCC-----------CCcEEEEEecCCcEEEEEecCCCCe-eeeeecccCCCC
Q 022111 84 WKEGNQNDWTQAHTFNDHKSSVNSIAWAPHE-----------LGLSLACGSSDGNISVFTATADGGW-DTTRIDQAHPVG 151 (302)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~-----------~~~~l~sg~~d~~v~~~~~~~~~~~-~~~~~~~~h~~~ 151 (302)
||++.... .....+.+|...|.+++|+|.. ++..+++|+.|+.|++||++..... .......+|...
T Consensus 128 wdl~~~~~-~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~ 206 (753)
T 3jro_A 128 VEFKENGT-TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW 206 (753)
T ss_dssp EECCSSSC-CCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred EEeecCCC-cceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCc
Confidence 99976532 2334567799999999999941 1568999999999999999865322 222222378999
Q ss_pred eEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcccc-ccccccccCCCceeEEEeeCCCCCCccEEEE
Q 022111 152 VTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKM-DCFPALQMHSDWVRSVAWAPNLGLPKSTIAS 230 (302)
Q Consensus 152 v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s 230 (302)
|.+++|+|+.. .+..|++|+.|+.|++||+.++.... .......+|...|.+++|+|++ ..|++
T Consensus 207 V~~l~~sp~~~-----------~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg----~~l~s 271 (753)
T 3jro_A 207 VRDVAWSPTVL-----------LRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG----NVLAL 271 (753)
T ss_dssp EEEEEECCCCS-----------SSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTT----CCEEE
T ss_pred EEEEEeccCCC-----------CCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCC----CEEEE
Confidence 99999998620 03789999999999999998753211 1233446689999999999986 67999
Q ss_pred EecCCeEEEEEecc
Q 022111 231 ASQDGTVVIWTCAK 244 (302)
Q Consensus 231 ~s~D~~i~iwd~~~ 244 (302)
++.||.|++|+++.
T Consensus 272 ~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 272 SGGDNKVTLWKENL 285 (753)
T ss_dssp ECSSSCEECCBCCS
T ss_pred EcCCCEEEEEecCC
Confidence 99999999999874
No 114
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=1.1e-28 Score=222.42 Aligned_cols=219 Identities=24% Similarity=0.380 Sum_probs=175.7
Q ss_pred cccccccceeEEEEccCCC-EEEEeeCCCcEEEEeecCCCc-----eEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCC
Q 022111 6 IETGHEDTVHDVAMDFYGK-RLATASSDSSIKIIGLSNSAS-----QHLATLKGHRGPVWQVAWAHPKFGSILASCSYDG 79 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~~-~l~s~~~d~~v~lw~~~~~~~-----~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~ 79 (302)
.+.+|...|++++|+|+++ +|++|+.||+|++|++..... .....+.+|...|.+++|++. .+.+|++++.|+
T Consensus 176 ~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~~l~s~~~dg 254 (430)
T 2xyi_A 176 RLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLL-HESLFGSVADDQ 254 (430)
T ss_dssp EEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSS-CTTEEEEEETTS
T ss_pred EecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCC-CCCEEEEEeCCC
Confidence 3568999999999999988 999999999999999865221 124567789999999999863 478999999999
Q ss_pred eEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCC
Q 022111 80 QVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAP 159 (302)
Q Consensus 80 ~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 159 (302)
.|++||++..........+..|...|++++|+|+. ..++++|+.|+.|++||++.... ....+. .|...|.++.|+|
T Consensus 255 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~-~~~l~tg~~dg~v~vwd~~~~~~-~~~~~~-~h~~~v~~i~~sp 331 (430)
T 2xyi_A 255 KLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLRNLKL-KLHSFE-SHKDEIFQVQWSP 331 (430)
T ss_dssp EEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSC-TTEEEEEETTSEEEEEETTCTTS-CSEEEE-CCSSCEEEEEECS
T ss_pred eEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCC-CCEEEEEeCCCeEEEEeCCCCCC-CeEEee-cCCCCEEEEEECC
Confidence 99999998653223555677899999999999983 24799999999999999985332 223333 6888999999999
Q ss_pred CCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccc----------cccccccccCCCceeEEEeeCCCCCCccEEE
Q 022111 160 AMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWK----------MDCFPALQMHSDWVRSVAWAPNLGLPKSTIA 229 (302)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~----------~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~ 229 (302)
++ ..+|++++.|+.|+|||+...... ...+..+.+|...|++++|+|++ ...|+
T Consensus 332 ~~-------------~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~---~~~l~ 395 (430)
T 2xyi_A 332 HN-------------ETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE---PWIIC 395 (430)
T ss_dssp SC-------------TTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSS---TTEEE
T ss_pred CC-------------CCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCC---CCEEE
Confidence 64 257999999999999999762110 13445667899999999999986 23899
Q ss_pred EEecCCeEEEEEecc
Q 022111 230 SASQDGTVVIWTCAK 244 (302)
Q Consensus 230 s~s~D~~i~iwd~~~ 244 (302)
+++.|+.|+||++..
T Consensus 396 s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 396 SVSEDNIMQVWQMAE 410 (430)
T ss_dssp EEETTSEEEEEEECH
T ss_pred EEECCCCEEEeEccc
Confidence 999999999999864
No 115
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=4.3e-28 Score=215.18 Aligned_cols=248 Identities=16% Similarity=0.251 Sum_probs=164.9
Q ss_pred cccccceeEEEEcc-CCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCC-CCCEEEEEeCCCeEEEEE
Q 022111 8 TGHEDTVHDVAMDF-YGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK-FGSILASCSYDGQVIIWK 85 (302)
Q Consensus 8 ~~h~~~v~~~~~s~-~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~~~l~s~s~D~~i~iwd 85 (302)
.+|...|++++|+| ++++|++++.|+.|++|++... +....+. |...+.+++|.+.. ++.++++++.|+.|++||
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 172 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL--QTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCD 172 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTT--EEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEE
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC--ccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEe
Confidence 36999999999999 7789999999999999998753 3444443 67789999997642 345899999999999999
Q ss_pred cCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeee--------------cccCCCC
Q 022111 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRI--------------DQAHPVG 151 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~--------------~~~h~~~ 151 (302)
+++.. ....+..|...|.+++|+|+. ..++++|+.|+.|++||++..... ...+ ...|...
T Consensus 173 ~~~~~---~~~~~~~~~~~v~~~~~~~~~-~~ll~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (408)
T 4a11_B 173 LKSGS---CSHILQGHRQEILAVSWSPRY-DYILATASADSRVKLWDVRRASGC-LITLDQHNGKKSQAVESANTAHNGK 247 (408)
T ss_dssp SSSSC---CCEEECCCCSCEEEEEECSSC-TTEEEEEETTSCEEEEETTCSSCC-SEECCTTTTCSCCCTTTSSCSCSSC
T ss_pred CCCcc---eeeeecCCCCcEEEEEECCCC-CcEEEEEcCCCcEEEEECCCCCcc-cccccccccccceeeccccccccCc
Confidence 97653 456788899999999999983 236999999999999998754311 0111 1357788
Q ss_pred eEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccc---------------------------------
Q 022111 152 VTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWK--------------------------------- 198 (302)
Q Consensus 152 v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~--------------------------------- 198 (302)
|.+++|+|++ .+|++++.|+.|++||+.++...
T Consensus 248 v~~~~~~~~~--------------~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (408)
T 4a11_B 248 VNGLCFTSDG--------------LHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG 313 (408)
T ss_dssp EEEEEECTTS--------------SEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET
T ss_pred eeEEEEcCCC--------------CEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC
Confidence 9999999864 56777777777777776543210
Q ss_pred ----------cccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEcc
Q 022111 199 ----------MDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSL 268 (302)
Q Consensus 199 ----------~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp 268 (302)
...+..+.+|...|.+++|+|++ .+|++++.||.|++||++.... ............++|
T Consensus 314 ~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~----~~l~s~~~dg~i~iw~~~~~~~------~~~~~~~~~~~~~~~ 383 (408)
T 4a11_B 314 STIAVYTVYSGEQITMLKGHYKTVDCCVFQSNF----QELYSGSRDCNILAWVPSLYEP------VPDDDETTTKSQLNP 383 (408)
T ss_dssp TEEEEEETTTCCEEEEECCCSSCEEEEEEETTT----TEEEEEETTSCEEEEEECC------------------------
T ss_pred CEEEEEECcCCcceeeeccCCCeEEEEEEcCCC----CEEEEECCCCeEEEEeCCCCCc------cCCCCceEecccccc
Confidence 12344567899999999999995 7899999999999999976421 111111112233444
Q ss_pred CC-CEEEEecCC-ceEEeeec
Q 022111 269 TG-NLLAVADAN-NVTLWKEA 287 (302)
Q Consensus 269 dg-~~la~~~~d-~i~~w~~~ 287 (302)
.. ..++..+++ .+++|+..
T Consensus 384 ~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 384 AFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp ---------------------
T ss_pred ccceeecccCccCceeecCCc
Confidence 22 333444445 79999854
No 116
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=5.3e-29 Score=213.87 Aligned_cols=203 Identities=13% Similarity=0.154 Sum_probs=143.2
Q ss_pred cccceeEEEEccC----CCEEEEeeC--------------------CCcEEEEeecCCCceEEEEecCcccCeEEEEeeC
Q 022111 10 HEDTVHDVAMDFY----GKRLATASS--------------------DSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH 65 (302)
Q Consensus 10 h~~~v~~~~~s~~----~~~l~s~~~--------------------d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~ 65 (302)
|...|+.++|+|| ++++++++. |++|++|+++. .++.+..+.+|...++.++|++
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~-dG~~~~s~~~~~~~v~~l~fs~ 188 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAE-DGGGKENQFLMPPEETILTFAE 188 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECT-TSCEEEEEEECCCSSCEEEEEE
T ss_pred cccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECC-CCceeeeeccCCCceeeEEeec
Confidence 3456777777887 677776553 99999999854 2456677788999999999987
Q ss_pred -CCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCC---CCeeEEEecCCCCCcEE------------EEEecCCcEE
Q 022111 66 -PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHK---SSVNSIAWAPHELGLSL------------ACGSSDGNIS 129 (302)
Q Consensus 66 -~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~---~~i~~l~~~pd~~~~~l------------~sg~~d~~v~ 129 (302)
+.++++|||++.|++|+|||++++. +++++.+|. ..+.+++|+|+ +.++ ++|+.|++|+
T Consensus 189 ~~g~~~~LaSgS~D~TIkIWDl~TGk---~l~tL~g~~~~v~~v~~vafSpd--G~~lvs~s~~~~~w~laSGs~D~tIk 263 (356)
T 2w18_A 189 VQGMQEALLGTTIMNNIVIWNLKTGQ---LLKKMHIDDSYQASVCHKAYSEM--GLLFIVLSHPCAKESESLRSPVFQLI 263 (356)
T ss_dssp EETSTTEEEEEETTSEEEEEETTTCC---EEEEEECCC---CCCEEEEEEET--TEEEEEEC------------CCEEEE
T ss_pred cCCCCceEEEecCCCcEEEEECCCCc---EEEEEcCCCcceeeeEEEEECCC--CCEEEEeccCCCcceeeccCCCcEEE
Confidence 4457899999999999999998763 667776543 46777899997 5554 6788999999
Q ss_pred EEEecCCCCeeeee--ecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcccccccccccc
Q 022111 130 VFTATADGGWDTTR--IDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQM 207 (302)
Q Consensus 130 ~~~~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~ 207 (302)
+|+..+........ +..+|...+.+..++ +..+|+++.|++|+|||+.++ +++.++.+
T Consensus 264 lWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s----------------g~~lASgS~DgTIkIWDl~tG----k~l~tL~g 323 (356)
T 2w18_A 264 VINPKTTLSVGVMLYCLPPGQAGRFLEGDVK----------------DHCAAAILTSGTIAIWDLLLG----QCTALLPP 323 (356)
T ss_dssp EEETTTTEEEEEEEECCCTTCCCCEEEEEEE----------------TTEEEEEETTSCEEEEETTTC----SEEEEECC
T ss_pred EEECCCCEEEEEEEeeccCCCcceeEccccC----------------CCEEEEEcCCCcEEEEECCCC----cEEEEecC
Confidence 99876432211111 112343332222211 357999999999999999887 46678889
Q ss_pred CCCcee-EEEeeCCCCCCccEEEEEecCCeEEEEEe
Q 022111 208 HSDWVR-SVAWAPNLGLPKSTIASASQDGTVVIWTC 242 (302)
Q Consensus 208 h~~~v~-~v~~~p~~~~~~~~l~s~s~D~~i~iwd~ 242 (302)
|...+. +++|+||+ ++|+||+.|++|||||+
T Consensus 324 H~~~vvs~vafSPDG----~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 324 VSDQHWSFVKWSGTD----SHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp C--CCCCEEEECSSS----SEEEEECTTSCEEEEEE
T ss_pred CCCCeEEEEEECCCC----CEEEEEECCCcEEEecC
Confidence 987655 68999995 78999999999999986
No 117
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8.3e-28 Score=210.17 Aligned_cols=239 Identities=10% Similarity=0.067 Sum_probs=170.8
Q ss_pred cceeEEEEccCCCEEEEeeCCCcEEEEeecCC-------CceEEEEe-cCcccCeEEEEeeCCCCCCEEEEEeCCCeEEE
Q 022111 12 DTVHDVAMDFYGKRLATASSDSSIKIIGLSNS-------ASQHLATL-KGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83 (302)
Q Consensus 12 ~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~-------~~~~~~~~-~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~i 83 (302)
..|.++.|+|+ +++++.|++|++|+.... ..+.+..+ .+|.+.|.+++|++..++++|++++.|++|++
T Consensus 77 ~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~ 153 (343)
T 3lrv_A 77 PNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGF 153 (343)
T ss_dssp ECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEE
T ss_pred CCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEE
Confidence 45666677776 999999999999976421 12223333 36778999999986223789999999999999
Q ss_pred EEcCCCCceeEEEEe-cCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCC
Q 022111 84 WKEGNQNDWTQAHTF-NDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMA 162 (302)
Q Consensus 84 wd~~~~~~~~~~~~~-~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 162 (302)
||+++.. ....+ ..|...|.+++|+|+ +.+|++|+.|+.|++||++..... ...+...|...|.+++|+|++
T Consensus 154 wd~~~~~---~~~~~~~~~~~~i~~~~~~pd--g~~lasg~~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~fs~~g- 226 (343)
T 3lrv_A 154 QSYEDDS---QYIVHSAKSDVEYSSGVLHKD--SLLLALYSPDGILDVYNLSSPDQA-SSRFPVDEEAKIKEVKFADNG- 226 (343)
T ss_dssp EESSSSC---EEEEECCCSSCCCCEEEECTT--SCEEEEECTTSCEEEEESSCTTSC-CEECCCCTTSCEEEEEECTTS-
T ss_pred EECCCCc---EEEEEecCCCCceEEEEECCC--CCEEEEEcCCCEEEEEECCCCCCC-ccEEeccCCCCEEEEEEeCCC-
Confidence 9998764 33333 345668999999998 679999999999999999865432 123432489999999999864
Q ss_pred CCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCcee--EEEeeCCCCCCccEEEEEec-CCeEEE
Q 022111 163 PGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVR--SVAWAPNLGLPKSTIASASQ-DGTVVI 239 (302)
Q Consensus 163 ~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~--~v~~~p~~~~~~~~l~s~s~-D~~i~i 239 (302)
.+|++++ |+.|++||+++.... ..+..+..|...+. +++|+|++ .+|++++. |+.++|
T Consensus 227 -------------~~l~s~~-~~~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g----~~l~~~s~~d~~i~v 287 (343)
T 3lrv_A 227 -------------YWMVVEC-DQTVVCFDLRKDVGT-LAYPTYTIPEFKTGTVTYDIDDSG----KNMIAYSNESNSLTI 287 (343)
T ss_dssp -------------SEEEEEE-SSBEEEEETTSSTTC-BSSCCCBC-----CCEEEEECTTS----SEEEEEETTTTEEEE
T ss_pred -------------CEEEEEe-CCeEEEEEcCCCCcc-eeecccccccccccceEEEECCCC----CEEEEecCCCCcEEE
Confidence 7899999 559999999876321 12223333555555 69999985 78999988 999999
Q ss_pred EEeccCCcceeeeeeccCCCcEEEEEEcc---CCCEEEEecCC-ceEEeee
Q 022111 240 WTCAKEGEQWEGRVLKDFKTPVWSVSWSL---TGNLLAVADAN-NVTLWKE 286 (302)
Q Consensus 240 wd~~~~~~~~~~~~~~~~~~~v~~~~~sp---dg~~la~~~~d-~i~~w~~ 286 (302)
|++......|.. .++..++|+| +++.|++++.| .+.++-.
T Consensus 288 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 288 YKFDKKTKNWTK-------DEESALCLQSDTADFTDMDVVCGDGGIAAILK 331 (343)
T ss_dssp EEECTTTCSEEE-------EEEEECCC----CCCCEEEEEEETTEEEEEEE
T ss_pred EEEcccccceEe-------cCceeEecCccccccceeEEEecCCceEEEEe
Confidence 999755433321 4677888988 88888888777 6777654
No 118
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.2e-26 Score=202.94 Aligned_cols=214 Identities=17% Similarity=0.239 Sum_probs=172.2
Q ss_pred EEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCC
Q 022111 47 HLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDG 126 (302)
Q Consensus 47 ~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~ 126 (302)
....+.+|.+.|++++|+++ +++|++++.|+.|++||+.+. .....+.+|...|.+++|+|+ +.+|++++.|+
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~--~~~l~~~~~dg~i~vwd~~~~---~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg 96 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKE--GDLLFSCSKDSSASVWYSLNG---ERLGTLDGHTGTIWSIDVDCF--TKYCVTGSADY 96 (369)
T ss_dssp EEEEEECCSSCEEEEEECTT--SCEEEEEESSSCEEEEETTTC---CEEEEECCCSSCEEEEEECTT--SSEEEEEETTT
T ss_pred ccEEEEEeeceEEEEEEcCC--CCEEEEEeCCCEEEEEeCCCc---hhhhhhhhcCCcEEEEEEcCC--CCEEEEEeCCC
Confidence 44568899999999999864 889999999999999998765 366788899999999999997 66999999999
Q ss_pred cEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCC-----CcEEEEEEecCcccc--
Q 022111 127 NISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD-----NTVKVWKMYNGIWKM-- 199 (302)
Q Consensus 127 ~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D-----~~v~iwd~~~~~~~~-- 199 (302)
.|++||+...... ..+ .+...+.++.|+|++ ..|++++.+ +.|++||+.......
T Consensus 97 ~i~iwd~~~~~~~--~~~--~~~~~v~~~~~~~~~--------------~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~ 158 (369)
T 3zwl_B 97 SIKLWDVSNGQCV--ATW--KSPVPVKRVEFSPCG--------------NYFLAILDNVMKNPGSINIYEIERDSATHEL 158 (369)
T ss_dssp EEEEEETTTCCEE--EEE--ECSSCEEEEEECTTS--------------SEEEEEECCBTTBCCEEEEEEEEECTTTCCE
T ss_pred eEEEEECCCCcEE--EEe--ecCCCeEEEEEccCC--------------CEEEEecCCccCCCCEEEEEEecCCccceee
Confidence 9999998754322 222 267789999999864 789999888 999999998653210
Q ss_pred -----ccccccccCCC--ceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCE
Q 022111 200 -----DCFPALQMHSD--WVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNL 272 (302)
Q Consensus 200 -----~~~~~~~~h~~--~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~ 272 (302)
.....+..|.. .+.+++|+|++ +.|++++.|+.|++||++..... ......+...|.+++|+|++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~ 232 (369)
T 3zwl_B 159 TKVSEEPIHKIITHEGLDAATVAGWSTKG----KYIIAGHKDGKISKYDVSNNYEY--VDSIDLHEKSISDMQFSPDLTY 232 (369)
T ss_dssp EEECSSCSEEEECCTTCCCEEEEEECGGG----CEEEEEETTSEEEEEETTTTTEE--EEEEECCSSCEEEEEECTTSSE
T ss_pred cccccceeeeccCCcCccceeEEEEcCCC----CEEEEEcCCCEEEEEECCCCcEe--EEEEecCCCceeEEEECCCCCE
Confidence 12233445666 89999999985 78999999999999999863221 2334567789999999999999
Q ss_pred EEEecCC-ceEEeeecCCce
Q 022111 273 LAVADAN-NVTLWKEAVDGE 291 (302)
Q Consensus 273 la~~~~d-~i~~w~~~~~~~ 291 (302)
|++++.| .|++|+......
T Consensus 233 l~~~~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 233 FITSSRDTNSFLVDVSTLQV 252 (369)
T ss_dssp EEEEETTSEEEEEETTTCCE
T ss_pred EEEecCCceEEEEECCCCce
Confidence 9999888 799999865443
No 119
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=8.4e-27 Score=200.26 Aligned_cols=246 Identities=13% Similarity=0.062 Sum_probs=156.0
Q ss_pred EEEEeeCCCcEEEEeecCC-CceEEEEecCcccCeEEEEeeCC-----------------------CC----CCEEEEEe
Q 022111 25 RLATASSDSSIKIIGLSNS-ASQHLATLKGHRGPVWQVAWAHP-----------------------KF----GSILASCS 76 (302)
Q Consensus 25 ~l~s~~~d~~v~lw~~~~~-~~~~~~~~~~h~~~v~~v~~~~~-----------------------~~----~~~l~s~s 76 (302)
.+++++ ..+|+||+.... ..+.+.++..|+.+|..|.+.|+ .+ ++++++++
T Consensus 56 ~~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g 134 (356)
T 2w18_A 56 CIITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSG 134 (356)
T ss_dssp EEEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEE
T ss_pred EEEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCC
Confidence 556665 568999998653 23566777777776666655541 12 45566654
Q ss_pred C--------------------CCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecC-CCCCcEEEEEecCCcEEEEEecC
Q 022111 77 Y--------------------DGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP-HELGLSLACGSSDGNISVFTATA 135 (302)
Q Consensus 77 ~--------------------D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~p-d~~~~~l~sg~~d~~v~~~~~~~ 135 (302)
. |++|++|++.... ..+..+.+|...++.++|+| +..+.+|++|+.|++|+|||+.+
T Consensus 135 ~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG--~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~T 212 (356)
T 2w18_A 135 NIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDG--GGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKT 212 (356)
T ss_dssp EEEEEEEETTTEEEEEESSSTTCEEEEEEECTTS--CEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTT
T ss_pred CeEEEEecCCCcEEEecccCCCCcEEEEEECCCC--ceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCC
Confidence 3 8889999884432 24556667888899999988 33367999999999999999976
Q ss_pred CCCeeeeeeccc--CCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccc-cccCCCce
Q 022111 136 DGGWDTTRIDQA--HPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPA-LQMHSDWV 212 (302)
Q Consensus 136 ~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~-~~~h~~~v 212 (302)
+... ..+... +...+.+++|+|++. .++..........++||+.|++|++||..++......... ..+|...+
T Consensus 213 Gk~l--~tL~g~~~~v~~v~~vafSpdG~--~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~ 288 (356)
T 2w18_A 213 GQLL--KKMHIDDSYQASVCHKAYSEMGL--LFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRF 288 (356)
T ss_dssp CCEE--EEEECCC---CCCEEEEEEETTE--EEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCE
T ss_pred CcEE--EEEcCCCcceeeeEEEEECCCCC--EEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCccee
Confidence 5432 333212 234677888998641 1111000011224689999999999998876311000001 24676665
Q ss_pred eEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEE-EEEEccCCCEEEEecCC-ceEEeee
Q 022111 213 RSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVW-SVSWSLTGNLLAVADAN-NVTLWKE 286 (302)
Q Consensus 213 ~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~-~~~~spdg~~la~~~~d-~i~~w~~ 286 (302)
.+.+++ +..+|+++.|++|||||+.+... ...+.+|...+. +++|||||++|++|+.| +|+||+.
T Consensus 289 lsg~~s------g~~lASgS~DgTIkIWDl~tGk~---l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 289 LEGDVK------DHCAAAILTSGTIAIWDLLLGQC---TALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEEE------TTEEEEEETTSCEEEEETTTCSE---EEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EccccC------CCEEEEEcCCCcEEEEECCCCcE---EEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 555554 25799999999999999986431 233456666555 58999999999999999 7999985
No 120
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=6.7e-27 Score=204.46 Aligned_cols=224 Identities=17% Similarity=0.258 Sum_probs=163.7
Q ss_pred ceEEEEecCcccCeEEEEeeCCCC--CCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEE
Q 022111 45 SQHLATLKGHRGPVWQVAWAHPKF--GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACG 122 (302)
Q Consensus 45 ~~~~~~~~~h~~~v~~v~~~~~~~--~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg 122 (302)
.+.+..+.+|.+.|++++|+++ . |++|++|+.|+.|++||+.+... .....+.+|...|.+++|+|+ +.+|+++
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~~-~~~g~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~h~~~v~~~~~~~~--~~~l~s~ 104 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSPP-TLPGNFLIAGSWANDVRCWEVQDSGQ-TIPKAQQMHTGPVLDVCWSDD--GSKVFTA 104 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECCT-TSSSEEEEEEETTSEEEEEEECTTSC-EEEEEEEECSSCEEEEEECTT--SSEEEEE
T ss_pred cceeEeccCCCCceEEEEEcCC-CCCceEEEEECCCCcEEEEEcCCCCc-eeEEEeccccCCEEEEEECcC--CCEEEEE
Confidence 3456678899999999999864 3 58999999999999999976322 233667789999999999997 6699999
Q ss_pred ecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEe--CCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccc
Q 022111 123 SSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSW--APAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMD 200 (302)
Q Consensus 123 ~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~ 200 (302)
+.|+.|++||+..... ... ..|...|.++.| +|+ +.+|++++.|+.|++||++++.....
T Consensus 105 ~~dg~v~iwd~~~~~~---~~~-~~~~~~v~~~~~~~~~~--------------~~~l~~~~~dg~i~vwd~~~~~~~~~ 166 (368)
T 3mmy_A 105 SCDKTAKMWDLSSNQA---IQI-AQHDAPVKTIHWIKAPN--------------YSCVMTGSWDKTLKFWDTRSSNPMMV 166 (368)
T ss_dssp ETTSEEEEEETTTTEE---EEE-EECSSCEEEEEEEECSS--------------CEEEEEEETTSEEEEECSSCSSCSEE
T ss_pred cCCCcEEEEEcCCCCc---eee-ccccCceEEEEEEeCCC--------------CCEEEEccCCCcEEEEECCCCcEEEE
Confidence 9999999999875422 222 268899999999 554 47899999999999999876521100
Q ss_pred c-------------------------------------ccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEec
Q 022111 201 C-------------------------------------FPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCA 243 (302)
Q Consensus 201 ~-------------------------------------~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~ 243 (302)
. ......+...+.++++.++....+..+++++.|+.|++||++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~ 246 (368)
T 3mmy_A 167 LQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYIN 246 (368)
T ss_dssp EECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESS
T ss_pred EecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecC
Confidence 0 000011234456666666543334559999999999999997
Q ss_pred cCCcceeeeeeccCCC------------cEEEEEEccCCCEEEEecCC-ceEEeeecCCc
Q 022111 244 KEGEQWEGRVLKDFKT------------PVWSVSWSLTGNLLAVADAN-NVTLWKEAVDG 290 (302)
Q Consensus 244 ~~~~~~~~~~~~~~~~------------~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~ 290 (302)
.............+.. +|.+++|+|+|++|++++.| .|++|+.....
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~ 306 (368)
T 3mmy_A 247 PPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDART 306 (368)
T ss_dssp CSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred CCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCc
Confidence 6432111112233332 69999999999999999988 69999986433
No 121
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=1.1e-27 Score=213.56 Aligned_cols=220 Identities=13% Similarity=0.130 Sum_probs=150.2
Q ss_pred cccccccceeEEEEcc--------CCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeC
Q 022111 6 IETGHEDTVHDVAMDF--------YGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSY 77 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~--------~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~ 77 (302)
.+.||++.|++++|+| |+++|||||.|++|+|||+... .++..+.+|...|.+++|+|+ ++.+|++++.
T Consensus 131 ~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~--~~~~~~~~~~~~v~~v~~~p~-~~~~l~~~~~ 207 (393)
T 4gq1_A 131 GKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE--GPILAGYPLSSPGISVQFRPS-NPNQLIVGER 207 (393)
T ss_dssp TTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT--EEEEEEEECSSCEEEEEEETT-EEEEEEEEET
T ss_pred ccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC--ceeeeecCCCCCcEEEEECCC-CCceEEecCC
Confidence 4679999999999997 7899999999999999999653 345566788899999999864 3468999999
Q ss_pred CCeEEEEEcCCCCcee----------------------EEEEecCCCCCeeEEEec-CCCCCcEEEEEecCCcEEEEEec
Q 022111 78 DGQVIIWKEGNQNDWT----------------------QAHTFNDHKSSVNSIAWA-PHELGLSLACGSSDGNISVFTAT 134 (302)
Q Consensus 78 D~~i~iwd~~~~~~~~----------------------~~~~~~~h~~~i~~l~~~-pd~~~~~l~sg~~d~~v~~~~~~ 134 (302)
|++|++||++.+.... ......+|...+.++.|+ || +..|++++.|+++++||+.
T Consensus 208 d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~d--g~~l~s~s~d~~i~vwd~~ 285 (393)
T 4gq1_A 208 NGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSD--GSGILAMCKSGAWLRWNLF 285 (393)
T ss_dssp TSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTT--TCEEEEECTTSEEEEEEC-
T ss_pred CCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCC--CCEEEEEeCCCCEEEEECc
Confidence 9999999987543210 011234688899999997 55 6799999999999999986
Q ss_pred CCCCeeeeeecccCCCCeEEEEeCCCCCCC----ceeeccc--CCCceeEEEeeCCCcEEEEEEecCccccccccccccC
Q 022111 135 ADGGWDTTRIDQAHPVGVTSVSWAPAMAPG----ALVGLGL--LDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMH 208 (302)
Q Consensus 135 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~----~~~~~~~--~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h 208 (302)
..... ..+. .|...+..+.+.|+.... ....... ..++.++++|+.|++|+|||+.++. +...+.+|
T Consensus 286 ~~~~~--~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~----~~~~~~~~ 358 (393)
T 4gq1_A 286 ANNDY--NEIS-DSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKD----SNSIPIQL 358 (393)
T ss_dssp ---------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTT----CCEEEEEC
T ss_pred cCCCC--ceEe-eecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCc----EEEEecCC
Confidence 43211 1121 344444444444432100 0000001 1134577888999999999998763 34456778
Q ss_pred CCceeEEEeeCCCCCCccEEEEEecCCeEEEEEe
Q 022111 209 SDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242 (302)
Q Consensus 209 ~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~ 242 (302)
..+|++|+|+||+ ++||++++|| +.+|.+
T Consensus 359 ~~~V~svafspdG----~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 359 GMPIVDFCWHQDG----SHLAIATEGS-VLLTRL 387 (393)
T ss_dssp SSCEEEEEECTTS----SEEEEEESSE-EEEEEE
T ss_pred CCcEEEEEEcCCC----CEEEEEeCCC-eEEEEE
Confidence 8999999999996 7899998776 556654
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=3.1e-25 Score=199.13 Aligned_cols=241 Identities=9% Similarity=0.091 Sum_probs=181.9
Q ss_pred ccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEE-EEEeCCCeEEEEE
Q 022111 7 ETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSIL-ASCSYDGQVIIWK 85 (302)
Q Consensus 7 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l-~s~s~D~~i~iwd 85 (302)
+.+|...|.+++|+++++++++++.|+.|++||+... +.+..+..|...+.+++|+++ ++++ ++++.|+.|++||
T Consensus 165 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~i~~~d 240 (433)
T 3bws_A 165 YKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL--AYKATVDLTGKWSKILLYDPI--RDLVYCSNWISEDISVID 240 (433)
T ss_dssp HHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC--CEEEEEECSSSSEEEEEEETT--TTEEEEEETTTTEEEEEE
T ss_pred ccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc--eEEEEEcCCCCCeeEEEEcCC--CCEEEEEecCCCcEEEEE
Confidence 3478889999999999999999999999999998653 455677789999999999874 5665 5666899999999
Q ss_pred cCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEe--------cCCcEEEEEecCCCCeeeeeecccCCCCeEEEEe
Q 022111 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGS--------SDGNISVFTATADGGWDTTRIDQAHPVGVTSVSW 157 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~--------~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 157 (302)
++++ .....+.. ...+.+++|+|+ +..+++++ .|+.|++||+...... ... .|...+.+++|
T Consensus 241 ~~~~---~~~~~~~~-~~~~~~~~~~~~--g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~--~~~--~~~~~~~~~~~ 310 (433)
T 3bws_A 241 RKTK---LEIRKTDK-IGLPRGLLLSKD--GKELYIAQFSASNQESGGGRLGIYSMDKEKLI--DTI--GPPGNKRHIVS 310 (433)
T ss_dssp TTTT---EEEEECCC-CSEEEEEEECTT--SSEEEEEEEESCTTCSCCEEEEEEETTTTEEE--EEE--EEEECEEEEEE
T ss_pred CCCC---cEEEEecC-CCCceEEEEcCC--CCEEEEEECCCCccccCCCeEEEEECCCCcEE--eec--cCCCCcceEEE
Confidence 9765 34555554 456899999998 55787777 4889999998744221 121 34456788999
Q ss_pred CCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEec----
Q 022111 158 APAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQ---- 233 (302)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~---- 233 (302)
+|++ ...+++++.|+.|++||+.++. ....+ .+...+.+++|+|++ +.|++++.
T Consensus 311 ~~~g-------------~~l~~~~~~~~~v~v~d~~~~~----~~~~~-~~~~~~~~~~~s~dg----~~l~~~~~~~~~ 368 (433)
T 3bws_A 311 GNTE-------------NKIYVSDMCCSKIEVYDLKEKK----VQKSI-PVFDKPNTIALSPDG----KYLYVSCRGPNH 368 (433)
T ss_dssp CSST-------------TEEEEEETTTTEEEEEETTTTE----EEEEE-ECSSSEEEEEECTTS----SEEEEEECCCCC
T ss_pred CCCC-------------CEEEEEecCCCEEEEEECCCCc----EEEEe-cCCCCCCeEEEcCCC----CEEEEEecCCCc
Confidence 9864 2467888999999999998653 22223 366779999999995 66777665
Q ss_pred -----------CCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecC-C-ceEEeeec
Q 022111 234 -----------DGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADA-N-NVTLWKEA 287 (302)
Q Consensus 234 -----------D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~-d-~i~~w~~~ 287 (302)
||.|++||+..... . .... ....+.+++|+|+|++|++++. + .|++|+..
T Consensus 369 ~~~~~~~~g~~dg~v~~~d~~~~~~--~-~~~~-~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 369 PTEGYLKKGLVLGKVYVIDTTTDTV--K-EFWE-AGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp TTTCTTSCCSSCCEEEEEETTTTEE--E-EEEE-CSSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred cccccccccccceEEEEEECCCCcE--E-EEec-CCCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 57999999875321 1 1122 2457899999999999988764 5 79999975
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=1e-23 Score=186.78 Aligned_cols=237 Identities=11% Similarity=0.095 Sum_probs=171.4
Q ss_pred cceeEEEEccCCCEE-EEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEE-EEEeCCCeEEEEEcCCC
Q 022111 12 DTVHDVAMDFYGKRL-ATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSIL-ASCSYDGQVIIWKEGNQ 89 (302)
Q Consensus 12 ~~v~~~~~s~~~~~l-~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l-~s~s~D~~i~iwd~~~~ 89 (302)
..+.+++|+|++++| ++++.|++|++||+.. .+.+..+..|. .+.+++|+++ +++| ++++.|+.|++||+.++
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~--~~~~~~~~~~~-~v~~~~~spd--g~~l~~~~~~~~~v~v~d~~~~ 106 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTAT--NNVIATVPAGS-SPQGVAVSPD--GKQVYVTNMASSTLSVIDTTSN 106 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTT--TEEEEEEECSS-SEEEEEECTT--SSEEEEEETTTTEEEEEETTTT
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCC--CeEEEEEECCC-CccceEECCC--CCEEEEEECCCCEEEEEECCCC
Confidence 458999999999876 6777999999999865 34555665554 8999999864 6665 55567899999999765
Q ss_pred CceeEEEEecCCCCCeeEEEecCCCCCcEE-EEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceee
Q 022111 90 NDWTQAHTFNDHKSSVNSIAWAPHELGLSL-ACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVG 168 (302)
Q Consensus 90 ~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l-~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 168 (302)
. ....+. +...+.+++|+|+ +..+ ++++.++.|++||+..... ...+. +...+.++.|+|++
T Consensus 107 ~---~~~~~~-~~~~~~~~~~s~d--g~~l~~~~~~~~~v~~~d~~~~~~--~~~~~--~~~~~~~~~~~~dg------- 169 (391)
T 1l0q_A 107 T---VAGTVK-TGKSPLGLALSPD--GKKLYVTNNGDKTVSVINTVTKAV--INTVS--VGRSPKGIAVTPDG------- 169 (391)
T ss_dssp E---EEEEEE-CSSSEEEEEECTT--SSEEEEEETTTTEEEEEETTTTEE--EEEEE--CCSSEEEEEECTTS-------
T ss_pred e---EEEEEe-CCCCcceEEECCC--CCEEEEEeCCCCEEEEEECCCCcE--EEEEe--cCCCcceEEECCCC-------
Confidence 3 344454 3457899999998 5555 7888899999999865322 22222 23456889999864
Q ss_pred cccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEe---cCCeEEEEEeccC
Q 022111 169 LGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS---QDGTVVIWTCAKE 245 (302)
Q Consensus 169 ~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s---~D~~i~iwd~~~~ 245 (302)
...+++++.|+.|++||+.++. +...+ .+...+.+++|+|++ +.|++++ .++.|++||++..
T Consensus 170 ------~~l~~~~~~~~~v~~~d~~~~~----~~~~~-~~~~~~~~~~~~~~g----~~l~~~~~~~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 170 ------TKVYVANFDSMSISVIDTVTNS----VIDTV-KVEAAPSGIAVNPEG----TKAYVTNVDKYFNTVSMIDTGTN 234 (391)
T ss_dssp ------SEEEEEETTTTEEEEEETTTTE----EEEEE-ECSSEEEEEEECTTS----SEEEEEEECSSCCEEEEEETTTT
T ss_pred ------CEEEEEeCCCCEEEEEECCCCe----EEEEE-ecCCCccceEECCCC----CEEEEEecCcCCCcEEEEECCCC
Confidence 2344788889999999998753 22222 356679999999985 6677776 6899999998754
Q ss_pred CcceeeeeeccCCCcEEEEEEccCCCEE-EEecCC-ceEEeeecCC
Q 022111 246 GEQWEGRVLKDFKTPVWSVSWSLTGNLL-AVADAN-NVTLWKEAVD 289 (302)
Q Consensus 246 ~~~~~~~~~~~~~~~v~~~~~spdg~~l-a~~~~d-~i~~w~~~~~ 289 (302)
.. . ..... ...+.+++|+|+|++| ++++.+ .|++|+....
T Consensus 235 ~~--~-~~~~~-~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 235 KI--T-ARIPV-GPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATN 276 (391)
T ss_dssp EE--E-EEEEC-CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred eE--E-EEEec-CCCccEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence 21 1 12222 3457899999999988 455556 7999998653
No 124
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=9.4e-25 Score=191.94 Aligned_cols=224 Identities=12% Similarity=0.106 Sum_probs=149.1
Q ss_pred eEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecC
Q 022111 46 QHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125 (302)
Q Consensus 46 ~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d 125 (302)
+++..+.+|...|++++|+++ |++||+|+.|+ +++|+.... ...... +...+..+++.++. ...+++++.|
T Consensus 10 ~~~~~~~~h~~~V~~v~fs~d--g~~la~g~~~~-~~iw~~~~~---~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~d 80 (355)
T 3vu4_A 10 NPIVPENHVSNPVTDYEFNQD--QSCLILSTLKS-FEIYNVHPV---AHIMSQ--EMRHLSKVRMLHRT-NYVAFVTGVK 80 (355)
T ss_dssp ---------CCCCCEEEECTT--SSEEEEECSSE-EEEEEETTE---EEEEEE--ECSCCCEEEECTTS-SEEEEECSST
T ss_pred CCccccccCCCceEEEEECCC--CCEEEEEcCCE-EEEEecCCc---ceeeee--ecCCeEEEEEcCCC-CEEEEEECCc
Confidence 345566889999999999864 88999888765 789998653 222222 22347888888763 3344678888
Q ss_pred CcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCC----CCceeecccCCC-----------------ceeEEE--ee
Q 022111 126 GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMA----PGALVGLGLLDP-----------------VQKLAS--CG 182 (302)
Q Consensus 126 ~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~----~~~~~~~~~~~~-----------------~~~l~s--~~ 182 (302)
++|++||..+... ...+ .+...|.++.++++.. .+.+.-...... ...++. |+
T Consensus 81 ~~v~iWd~~~~~~--~~~~--~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~ 156 (355)
T 3vu4_A 81 EVVHIWDDVKKQD--VSRI--KVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEF 156 (355)
T ss_dssp TEEEEEETTTTEE--EEEE--ECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESS
T ss_pred cEEEEEECCCCcE--EEEE--ECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCC
Confidence 9999999875422 2233 3556788888877421 000000000000 023444 68
Q ss_pred CCCcEEEEEEecCcc-----------ccc-cccccccCCCceeEEEeeCCCCCCccEEEEEecCCe-EEEEEeccCCcce
Q 022111 183 CDNTVKVWKMYNGIW-----------KMD-CFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGT-VVIWTCAKEGEQW 249 (302)
Q Consensus 183 ~D~~v~iwd~~~~~~-----------~~~-~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~-i~iwd~~~~~~~~ 249 (302)
.|+.|++||+.++.. ... +...+.+|.+.|++++|+|++ .+|++|+.|++ |+|||++....
T Consensus 157 ~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g----~~l~s~s~d~~~v~iwd~~~~~~-- 230 (355)
T 3vu4_A 157 NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS----DMVATCSQDGTIIRVFKTEDGVL-- 230 (355)
T ss_dssp CTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTS----SEEEEEETTCSEEEEEETTTCCE--
T ss_pred cCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCC----CEEEEEeCCCCEEEEEECCCCcE--
Confidence 899999999986420 000 145678999999999999985 78999999998 99999986432
Q ss_pred eeeeecc-CCCcEEEEEEccCCCEEEEecCC-ceEEeeecC
Q 022111 250 EGRVLKD-FKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAV 288 (302)
Q Consensus 250 ~~~~~~~-~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~ 288 (302)
...+..+ |..+|.+++|+|+|++|++++.| .|++|+...
T Consensus 231 ~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 231 VREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp EEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred EEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccC
Confidence 1223224 78899999999999999999998 799999854
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.94 E-value=1.3e-24 Score=195.13 Aligned_cols=238 Identities=9% Similarity=0.014 Sum_probs=178.7
Q ss_pred cceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEE-----EecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEc
Q 022111 12 DTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLA-----TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE 86 (302)
Q Consensus 12 ~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~-----~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~ 86 (302)
..+.+++|+|+++++++++.|++|++||+.... ... .+.+|.+.|.+++|++ +++++++++.|+.|++||+
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~--~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~s~~~d~~v~~~d~ 198 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQ--TVRLSPPEKYKKKLGFVETISIPE--HNELWVSQMQANAVHVFDL 198 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCC--EEEECCCHHHHTTCCEEEEEEEGG--GTEEEEEEGGGTEEEEEET
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCe--EeeecCcccccccCCceeEEEEcC--CCEEEEEECCCCEEEEEEC
Confidence 345688999977888888899999999987543 233 3457888999999965 3789999999999999999
Q ss_pred CCCCceeEEEEecCCCCCeeEEEecCCCCCcEE-EEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCc
Q 022111 87 GNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSL-ACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGA 165 (302)
Q Consensus 87 ~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l-~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 165 (302)
++.. ....+..|...+.+++|+|+ +..+ ++++.|+.|++||+.... ....+ .+...+.+++|+|++
T Consensus 199 ~~~~---~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~i~~~d~~~~~--~~~~~--~~~~~~~~~~~~~~g---- 265 (433)
T 3bws_A 199 KTLA---YKATVDLTGKWSKILLYDPI--RDLVYCSNWISEDISVIDRKTKL--EIRKT--DKIGLPRGLLLSKDG---- 265 (433)
T ss_dssp TTCC---EEEEEECSSSSEEEEEEETT--TTEEEEEETTTTEEEEEETTTTE--EEEEC--CCCSEEEEEEECTTS----
T ss_pred CCce---EEEEEcCCCCCeeEEEEcCC--CCEEEEEecCCCcEEEEECCCCc--EEEEe--cCCCCceEEEEcCCC----
Confidence 7653 45666678899999999998 4455 566689999999986432 22222 223458899999864
Q ss_pred eeecccCCCceeEEEee--------CCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeE
Q 022111 166 LVGLGLLDPVQKLASCG--------CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237 (302)
Q Consensus 166 ~~~~~~~~~~~~l~s~~--------~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i 237 (302)
+.|++++ .|+.|++||+.++. ... ...|...+.+++|+|++ ...+++++.|+.|
T Consensus 266 ----------~~l~~~~~~~~~~~~~dg~i~~~d~~~~~----~~~-~~~~~~~~~~~~~~~~g---~~l~~~~~~~~~v 327 (433)
T 3bws_A 266 ----------KELYIAQFSASNQESGGGRLGIYSMDKEK----LID-TIGPPGNKRHIVSGNTE---NKIYVSDMCCSKI 327 (433)
T ss_dssp ----------SEEEEEEEESCTTCSCCEEEEEEETTTTE----EEE-EEEEEECEEEEEECSST---TEEEEEETTTTEE
T ss_pred ----------CEEEEEECCCCccccCCCeEEEEECCCCc----EEe-eccCCCCcceEEECCCC---CEEEEEecCCCEE
Confidence 5777776 58899999998653 111 23456678999999986 2466788999999
Q ss_pred EEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC----------------ceEEeeecC
Q 022111 238 VIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN----------------NVTLWKEAV 288 (302)
Q Consensus 238 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d----------------~i~~w~~~~ 288 (302)
++||++.... . .. ..+...+.+++|+|+|++|++++.+ .|++|+...
T Consensus 328 ~v~d~~~~~~--~-~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 328 EVYDLKEKKV--Q-KS-IPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp EEEETTTTEE--E-EE-EECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred EEEECCCCcE--E-EE-ecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC
Confidence 9999875321 1 11 2355679999999999988888653 699999754
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.93 E-value=3e-23 Score=183.74 Aligned_cols=226 Identities=12% Similarity=0.123 Sum_probs=165.2
Q ss_pred CEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEE-EEEeCCCeEEEEEcCCCCceeEEEEecCCC
Q 022111 24 KRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSIL-ASCSYDGQVIIWKEGNQNDWTQAHTFNDHK 102 (302)
Q Consensus 24 ~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l-~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~ 102 (302)
..+++++.|++|++||+.. .+.+..+..|. .+.+++|+++ +++| ++++.|++|++||+.++ .....+..+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~--~~~~~~~~~~~-~~~~~~~s~d--g~~l~~~~~~d~~i~v~d~~~~---~~~~~~~~~~ 74 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTS--NKVTATIPVGS-NPMGAVISPD--GTKVYVANAHSNDVSIIDTATN---NVIATVPAGS 74 (391)
T ss_dssp EEEEEETTTTEEEEEETTT--TEEEEEEECSS-SEEEEEECTT--SSEEEEEEGGGTEEEEEETTTT---EEEEEEECSS
T ss_pred EEEEEcCCCCEEEEEECCC--CeEEEEeecCC-CcceEEECCC--CCEEEEECCCCCeEEEEECCCC---eEEEEEECCC
Confidence 4678889999999999865 45566677665 4899999864 6655 77889999999999765 3455555444
Q ss_pred CCeeEEEecCCCCCcEE-EEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEe
Q 022111 103 SSVNSIAWAPHELGLSL-ACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASC 181 (302)
Q Consensus 103 ~~i~~l~~~pd~~~~~l-~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 181 (302)
.+.+++|+|+ +.+| ++++.++.|++||+..... ...+ .+...+.+++|+|++ ..+++++
T Consensus 75 -~v~~~~~spd--g~~l~~~~~~~~~v~v~d~~~~~~--~~~~--~~~~~~~~~~~s~dg-------------~~l~~~~ 134 (391)
T 1l0q_A 75 -SPQGVAVSPD--GKQVYVTNMASSTLSVIDTTSNTV--AGTV--KTGKSPLGLALSPDG-------------KKLYVTN 134 (391)
T ss_dssp -SEEEEEECTT--SSEEEEEETTTTEEEEEETTTTEE--EEEE--ECSSSEEEEEECTTS-------------SEEEEEE
T ss_pred -CccceEECCC--CCEEEEEECCCCEEEEEECCCCeE--EEEE--eCCCCcceEEECCCC-------------CEEEEEe
Confidence 8999999998 4555 5666779999999875422 2222 234568899999864 1344788
Q ss_pred eCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEE-EEEecCCeEEEEEeccCCcceeeeeeccCCCc
Q 022111 182 GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTI-ASASQDGTVVIWTCAKEGEQWEGRVLKDFKTP 260 (302)
Q Consensus 182 ~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l-~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~ 260 (302)
+.|+.|++||+.++. ....+..| ..+.+++|+|++ +.| ++++.|+.|++||++.... . .. ..+...
T Consensus 135 ~~~~~v~~~d~~~~~----~~~~~~~~-~~~~~~~~~~dg----~~l~~~~~~~~~v~~~d~~~~~~--~-~~-~~~~~~ 201 (391)
T 1l0q_A 135 NGDKTVSVINTVTKA----VINTVSVG-RSPKGIAVTPDG----TKVYVANFDSMSISVIDTVTNSV--I-DT-VKVEAA 201 (391)
T ss_dssp TTTTEEEEEETTTTE----EEEEEECC-SSEEEEEECTTS----SEEEEEETTTTEEEEEETTTTEE--E-EE-EECSSE
T ss_pred CCCCEEEEEECCCCc----EEEEEecC-CCcceEEECCCC----CEEEEEeCCCCEEEEEECCCCeE--E-EE-EecCCC
Confidence 889999999998763 23334444 457999999996 444 7888999999999975421 1 11 234567
Q ss_pred EEEEEEccCCCEEEEec---CC-ceEEeeecCCc
Q 022111 261 VWSVSWSLTGNLLAVAD---AN-NVTLWKEAVDG 290 (302)
Q Consensus 261 v~~~~~spdg~~la~~~---~d-~i~~w~~~~~~ 290 (302)
+.+++|+|+|++|++++ .+ .|++|+.....
T Consensus 202 ~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 202 PSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK 235 (391)
T ss_dssp EEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred ccceEECCCCCEEEEEecCcCCCcEEEEECCCCe
Confidence 89999999999998886 45 79999986443
No 127
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=1.9e-22 Score=174.72 Aligned_cols=266 Identities=12% Similarity=0.193 Sum_probs=174.4
Q ss_pred ccccceeEEEEccCCCEEEEeeCC-CcEEEEeec--CCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEe-CCCeEEEE
Q 022111 9 GHEDTVHDVAMDFYGKRLATASSD-SSIKIIGLS--NSASQHLATLKGHRGPVWQVAWAHPKFGSILASCS-YDGQVIIW 84 (302)
Q Consensus 9 ~h~~~v~~~~~s~~~~~l~s~~~d-~~v~lw~~~--~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s-~D~~i~iw 84 (302)
.|...+..++|+|++++|++++.+ +.|++|++. .+....+..+..+. .+..++|+++ +++|++++ .++.|.+|
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~d--g~~l~~~~~~~~~i~~~ 111 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQ--GQFVFVGSYNAGNVSVT 111 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTT--SSEEEEEETTTTEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCC--CCEEEEEecCCCeEEEE
Confidence 466678889999999999988887 999999997 33334455555444 7789999864 77665555 58999999
Q ss_pred EcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEe-cCCcEEEEEecCCCCeeee---eecccCCCCeEEEEeCCC
Q 022111 85 KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGS-SDGNISVFTATADGGWDTT---RIDQAHPVGVTSVSWAPA 160 (302)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~-~d~~v~~~~~~~~~~~~~~---~~~~~h~~~v~~~~~~~~ 160 (302)
|+.++........+.. ...+.+++|+|+ +..+++++ .++.|.+|++...+..... .........+..+.|+|+
T Consensus 112 d~~~~~~~~~~~~~~~-~~~~~~~~~s~d--g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd 188 (343)
T 1ri6_A 112 RLEDGLPVGVVDVVEG-LDGCHSANISPD--NRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPN 188 (343)
T ss_dssp EEETTEEEEEEEEECC-CTTBCCCEECTT--SSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTT
T ss_pred ECCCCccccccccccC-CCCceEEEECCC--CCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCC
Confidence 9853222234444443 346899999998 55666666 8999999999763433211 222123346778999886
Q ss_pred CCCCceeecccCCCce-eEEEeeCCCcEEEEEEec--Cccc-cccccccc-c--CCCceeEEEeeCCCCCCccEEEEEec
Q 022111 161 MAPGALVGLGLLDPVQ-KLASCGCDNTVKVWKMYN--GIWK-MDCFPALQ-M--HSDWVRSVAWAPNLGLPKSTIASASQ 233 (302)
Q Consensus 161 ~~~~~~~~~~~~~~~~-~l~s~~~D~~v~iwd~~~--~~~~-~~~~~~~~-~--h~~~v~~v~~~p~~~~~~~~l~s~s~ 233 (302)
+ + .++++..++.|++||+.. +... ......+. + ....+.+++|+|++ ...++++..
T Consensus 189 g--------------~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg---~~l~v~~~~ 251 (343)
T 1ri6_A 189 E--------------QYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDG---RHLYACDRT 251 (343)
T ss_dssp S--------------SEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTS---SEEEEEETT
T ss_pred C--------------CEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCC---CEEEEEecC
Confidence 4 4 445566899999999853 2111 11111111 1 13467789999996 234446668
Q ss_pred CCeEEEEEeccCCcceee-eeeccCCCcEEEEEEccCCCEEEEecC-C-ceEEeeec-CCceEEEeeec
Q 022111 234 DGTVVIWTCAKEGEQWEG-RVLKDFKTPVWSVSWSLTGNLLAVADA-N-NVTLWKEA-VDGEWQQVSVV 298 (302)
Q Consensus 234 D~~i~iwd~~~~~~~~~~-~~~~~~~~~v~~~~~spdg~~la~~~~-d-~i~~w~~~-~~~~~~~~~~~ 298 (302)
|+.|++||+......... ..... ...+.+++|+|+|++|++++. + .+.+|+.. ..|.+++...+
T Consensus 252 ~~~i~v~d~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 252 ASLITVFSVSEDGSVLSKEGFQPT-ETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp TTEEEEEEECTTSCCEEEEEEEEC-SSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEE
T ss_pred CCEEEEEEEcCCCCceEEeeeecC-CCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccc
Confidence 999999999732211111 11122 233788999999998888874 4 79999764 34666665543
No 128
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=7.9e-22 Score=172.10 Aligned_cols=261 Identities=12% Similarity=0.126 Sum_probs=172.7
Q ss_pred cccceeEEEEccCCCEEEEeeC---CCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEe-CCCeEEEEE
Q 022111 10 HEDTVHDVAMDFYGKRLATASS---DSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCS-YDGQVIIWK 85 (302)
Q Consensus 10 h~~~v~~~~~s~~~~~l~s~~~---d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s-~D~~i~iwd 85 (302)
+...+..++|+|||+ |++++. ++.|++|++..+..+.+..+..|...+..++|+++ |++|++++ .++++.+|+
T Consensus 38 ~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spd--g~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 38 ATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEA--RQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp ECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETT--TTEEEEEETTTTEEEEEE
T ss_pred ccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCC--CCEEEEEeCCCCEEEEEE
Confidence 445567799999998 555554 68999999976554455555667778889999874 78777777 789999999
Q ss_pred cCCCCceeEEEEecC---------CCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeee-eeecccCCCCeEEE
Q 022111 86 EGNQNDWTQAHTFND---------HKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDT-TRIDQAHPVGVTSV 155 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~---------h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~-~~~~~~h~~~v~~~ 155 (302)
+........+..+.. +...+.+++|+|+ +.++++...++.|.+|++...+.... .............+
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spd--g~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~ 192 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPD--NRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHL 192 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTT--SCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEE
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCC--CcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceE
Confidence 864333333333321 1234789999998 55677777788999999974443322 11121223356788
Q ss_pred EeCCCCCCCceeecccCCCce-eEEEeeCCCcEEEEEEecCccccccccccccC------CCceeEEEeeCCCCCCccEE
Q 022111 156 SWAPAMAPGALVGLGLLDPVQ-KLASCGCDNTVKVWKMYNGIWKMDCFPALQMH------SDWVRSVAWAPNLGLPKSTI 228 (302)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~-~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h------~~~v~~v~~~p~~~~~~~~l 228 (302)
+|+|++ + .++++..++.|++|++......+.....+... ...+..++|+||+ ++|
T Consensus 193 ~~spdg--------------~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG----~~l 254 (347)
T 3hfq_A 193 VFSPDG--------------QYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDG----HFL 254 (347)
T ss_dssp EECTTS--------------SEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTS----CEE
T ss_pred EECCCC--------------CEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCC----CEE
Confidence 999864 4 45556778999999998521111111122111 2458899999996 545
Q ss_pred -EEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC--ceEEeeec-CCceEE
Q 022111 229 -ASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN--NVTLWKEA-VDGEWQ 293 (302)
Q Consensus 229 -~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d--~i~~w~~~-~~~~~~ 293 (302)
++...++.|++|++...+..........+...+..++|+|||++|++++.+ .+.+|+.. ..|+..
T Consensus 255 ~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 255 YVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 677779999999987432111111222334457899999999998888654 69999764 345544
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=5.4e-23 Score=184.54 Aligned_cols=238 Identities=15% Similarity=0.171 Sum_probs=170.2
Q ss_pred ccccccceeEEEEcc--------------CCCEEEEeeCC------CcEEEEeecCCCceEEEEecCcccCeEEEEeeCC
Q 022111 7 ETGHEDTVHDVAMDF--------------YGKRLATASSD------SSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHP 66 (302)
Q Consensus 7 ~~~h~~~v~~~~~s~--------------~~~~l~s~~~d------~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~ 66 (302)
+.+|...+..+++++ .+..++.++.+ ++|++||+... ....+.+|...|.+++|+|+
T Consensus 113 ~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~---~~~~l~~~~~~v~~~~~Spd 189 (415)
T 2hqs_A 113 YKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGY---NQFVVHRSPQPLMSPAWSPD 189 (415)
T ss_dssp EEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSC---SCEEEEEESSCEEEEEECTT
T ss_pred EEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCC---CCEEEeCCCCcceeeEEcCC
Confidence 445666666555553 25566666654 79999998643 34567789999999999874
Q ss_pred CCCCEEEEEeCCC---eEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEE-EEecCCc--EEEEEecCCCCee
Q 022111 67 KFGSILASCSYDG---QVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA-CGSSDGN--ISVFTATADGGWD 140 (302)
Q Consensus 67 ~~~~~l~s~s~D~---~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~-sg~~d~~--v~~~~~~~~~~~~ 140 (302)
|++|++++.|+ .|++||+.++. ...+..|...+.+++|+|| |..|+ +++.++. |++||+.... .
T Consensus 190 --g~~la~~s~~~~~~~i~~~d~~tg~----~~~l~~~~~~~~~~~~spd--g~~la~~~~~~g~~~i~~~d~~~~~-~- 259 (415)
T 2hqs_A 190 --GSKLAYVTFESGRSALVIQTLANGA----VRQVASFPRHNGAPAFSPD--GSKLAFALSKTGSLNLYVMDLASGQ-I- 259 (415)
T ss_dssp --SSEEEEEECTTSSCEEEEEETTTCC----EEEEECCSSCEEEEEECTT--SSEEEEEECTTSSCEEEEEETTTCC-E-
T ss_pred --CCEEEEEEecCCCcEEEEEECCCCc----EEEeecCCCcccCEEEcCC--CCEEEEEEecCCCceEEEEECCCCC-E-
Confidence 89999999885 99999997753 2345568889999999998 66666 6666655 8888876432 2
Q ss_pred eeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeC-CC--cEEEEEEecCccccccccccccCCCceeEEEe
Q 022111 141 TTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGC-DN--TVKVWKMYNGIWKMDCFPALQMHSDWVRSVAW 217 (302)
Q Consensus 141 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~-D~--~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~ 217 (302)
..+. .|...+.++.|+|++ +.|+.++. ++ .|++||+.++. ...+..|...+.+++|
T Consensus 260 -~~l~-~~~~~~~~~~~spdg--------------~~l~~~s~~~g~~~i~~~d~~~~~-----~~~l~~~~~~~~~~~~ 318 (415)
T 2hqs_A 260 -RQVT-DGRSNNTEPTWFPDS--------------QNLAFTSDQAGRPQVYKVNINGGA-----PQRITWEGSQNQDADV 318 (415)
T ss_dssp -EECC-CCSSCEEEEEECTTS--------------SEEEEEECTTSSCEEEEEETTSSC-----CEECCCSSSEEEEEEE
T ss_pred -EeCc-CCCCcccceEECCCC--------------CEEEEEECCCCCcEEEEEECCCCC-----EEEEecCCCcccCeEE
Confidence 2332 567789999999974 66776665 55 56666776542 2234557778999999
Q ss_pred eCCCCCCccEEEEEecC---CeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC----ceEEeeec
Q 022111 218 APNLGLPKSTIASASQD---GTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN----NVTLWKEA 287 (302)
Q Consensus 218 ~p~~~~~~~~l~s~s~D---~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d----~i~~w~~~ 287 (302)
+|++ ++|++++.+ ..|++||+..... ..+..+. .+.+++|+|||++|++++.+ .|.+|+..
T Consensus 319 spdG----~~l~~~~~~~g~~~i~~~d~~~~~~----~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 319 SSDG----KFMVMVSSNGGQQHIAKQDLATGGV----QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp CTTS----SEEEEEEECSSCEEEEEEETTTCCE----EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred CCCC----CEEEEEECcCCceEEEEEECCCCCE----EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC
Confidence 9996 678877764 5899999875421 2233333 78999999999999888654 37888864
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.91 E-value=8.6e-22 Score=176.70 Aligned_cols=222 Identities=17% Similarity=0.141 Sum_probs=164.5
Q ss_pred cccccccceeEEEEccCCCEEEEeeCCC---cEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEE-EEeCCCe-
Q 022111 6 IETGHEDTVHDVAMDFYGKRLATASSDS---SIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILA-SCSYDGQ- 80 (302)
Q Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~---~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~-s~s~D~~- 80 (302)
.+.+|...|.+++|+|||++||+++.|+ +|++||+..+. . ..+..|...+.+++|+|+ |++|+ +++.|+.
T Consensus 173 ~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~--~-~~l~~~~~~~~~~~~spd--g~~la~~~~~~g~~ 247 (415)
T 2hqs_A 173 VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA--V-RQVASFPRHNGAPAFSPD--GSKLAFALSKTGSL 247 (415)
T ss_dssp EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--E-EEEECCSSCEEEEEECTT--SSEEEEEECTTSSC
T ss_pred EEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc--E-EEeecCCCcccCEEEcCC--CCEEEEEEecCCCc
Confidence 4557888999999999999999999885 99999997543 2 346678889999999874 78766 7766655
Q ss_pred -EEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEec-CC--cEEEEEecCCCCeeeeeecccCCCCeEEEE
Q 022111 81 -VIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSS-DG--NISVFTATADGGWDTTRIDQAHPVGVTSVS 156 (302)
Q Consensus 81 -i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~-d~--~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 156 (302)
|.+||++++. ...+..|...+.+++|+|| |..|++++. ++ .|.+||+..... ..+. .+...+.+++
T Consensus 248 ~i~~~d~~~~~----~~~l~~~~~~~~~~~~spd--g~~l~~~s~~~g~~~i~~~d~~~~~~---~~l~-~~~~~~~~~~ 317 (415)
T 2hqs_A 248 NLYVMDLASGQ----IRQVTDGRSNNTEPTWFPD--SQNLAFTSDQAGRPQVYKVNINGGAP---QRIT-WEGSQNQDAD 317 (415)
T ss_dssp EEEEEETTTCC----EEECCCCSSCEEEEEECTT--SSEEEEEECTTSSCEEEEEETTSSCC---EECC-CSSSEEEEEE
T ss_pred eEEEEECCCCC----EEeCcCCCCcccceEECCC--CCEEEEEECCCCCcEEEEEECCCCCE---EEEe-cCCCcccCeE
Confidence 8889987652 3567778889999999998 667777775 45 555566653321 2222 3556688899
Q ss_pred eCCCCCCCceeecccCCCceeEEEeeCC---CcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEec
Q 022111 157 WAPAMAPGALVGLGLLDPVQKLASCGCD---NTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQ 233 (302)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~l~s~~~D---~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~ 233 (302)
|+|++ ++|++++.+ ..|++||+.++.. ..+..|. .+.+++|+|++ +.|++++.
T Consensus 318 ~spdG--------------~~l~~~~~~~g~~~i~~~d~~~~~~-----~~l~~~~-~~~~~~~spdg----~~l~~~s~ 373 (415)
T 2hqs_A 318 VSSDG--------------KFMVMVSSNGGQQHIAKQDLATGGV-----QVLSSTF-LDETPSLAPNG----TMVIYSSS 373 (415)
T ss_dssp ECTTS--------------SEEEEEEECSSCEEEEEEETTTCCE-----EECCCSS-SCEEEEECTTS----SEEEEEEE
T ss_pred ECCCC--------------CEEEEEECcCCceEEEEEECCCCCE-----EEecCCC-CcCCeEEcCCC----CEEEEEEc
Confidence 99974 677777654 5799999987632 2344454 79999999996 77888887
Q ss_pred CC---eEEEEEeccCCcceeeeeeccCCCcEEEEEEccCC
Q 022111 234 DG---TVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTG 270 (302)
Q Consensus 234 D~---~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg 270 (302)
|+ .|++||+.... ...+..+.+.|.+++|+|.-
T Consensus 374 ~~~~~~l~~~d~~g~~----~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 374 QGMGSVLNLVSTDGRF----KARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp ETTEEEEEEEETTSCC----EEECCCSSSEEEEEEECCCC
T ss_pred CCCccEEEEEECCCCc----EEEeeCCCCCCcCCcccccc
Confidence 77 79999986431 23456777889999999954
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=4.6e-22 Score=168.21 Aligned_cols=239 Identities=14% Similarity=0.101 Sum_probs=167.6
Q ss_pred ccccccceeEEEEccCCCEEEEeeCCCcEEEEeecC-CCceEEEEecCc-ccCeEEEEeeCCCCCCEEEEEe--CCCeEE
Q 022111 7 ETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSN-SASQHLATLKGH-RGPVWQVAWAHPKFGSILASCS--YDGQVI 82 (302)
Q Consensus 7 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~-~~~~~~~~~~~h-~~~v~~v~~~~~~~~~~l~s~s--~D~~i~ 82 (302)
...|...|.+++|+|++++|++++ ++.|++|++.. ... .....+| ...+.+++|+++ +++|++++ .++..+
T Consensus 37 ~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~spd--g~~l~~~~~~~~~~~~ 111 (297)
T 2ojh_A 37 VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSP--EKVDTGFATICNNDHGISPD--GALYAISDKVEFGKSA 111 (297)
T ss_dssp EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSC--EECCCTTCCCBCSCCEECTT--SSEEEEEECTTTSSCE
T ss_pred eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCc--eEeccccccccccceEECCC--CCEEEEEEeCCCCcce
Confidence 446888999999999999999876 88999999876 432 2333444 467889999864 88999988 445677
Q ss_pred EEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEE-EEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCC
Q 022111 83 IWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA-CGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAM 161 (302)
Q Consensus 83 iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~-sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 161 (302)
||.+..... ....+..+ ..+..++|+|+ +..|+ +++.++.+++|++...+.. ...+ ..+...+.++.|+|++
T Consensus 112 l~~~~~~~~--~~~~~~~~-~~~~~~~~spd--g~~l~~~~~~~~~~~l~~~~~~~~~-~~~~-~~~~~~~~~~~~s~dg 184 (297)
T 2ojh_A 112 IYLLPSTGG--TPRLMTKN-LPSYWHGWSPD--GKSFTYCGIRDQVFDIYSMDIDSGV-ETRL-THGEGRNDGPDYSPDG 184 (297)
T ss_dssp EEEEETTCC--CCEECCSS-SSEEEEEECTT--SSEEEEEEEETTEEEEEEEETTTCC-EEEC-CCSSSCEEEEEECTTS
T ss_pred EEEEECCCC--ceEEeecC-CCccceEECCC--CCEEEEEECCCCceEEEEEECCCCc-ceEc-ccCCCccccceECCCC
Confidence 776532211 23344433 35899999998 55555 7888999999997643221 1222 2566778999999864
Q ss_pred CCCceeecccCCCceeEEEe-eCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecC------
Q 022111 162 APGALVGLGLLDPVQKLASC-GCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQD------ 234 (302)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~s~-~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D------ 234 (302)
+.|+.+ ..++.++||++.... .....+..|...+.+++|+|++ ++|+.++.+
T Consensus 185 --------------~~l~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~s~dg----~~l~~~~~~~~~~~~ 243 (297)
T 2ojh_A 185 --------------RWIYFNSSRTGQMQIWRVRVDG---SSVERITDSAYGDWFPHPSPSG----DKVVFVSYDADVFDH 243 (297)
T ss_dssp --------------SEEEEEECTTSSCEEEEEETTS---SCEEECCCCSEEEEEEEECTTS----SEEEEEEEETTCCSC
T ss_pred --------------CEEEEEecCCCCccEEEECCCC---CCcEEEecCCcccCCeEECCCC----CEEEEEEcCCCCCcc
Confidence 555554 469999999987321 2234556678889999999995 678777765
Q ss_pred -----CeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC
Q 022111 235 -----GTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN 279 (302)
Q Consensus 235 -----~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d 279 (302)
+.|.+||+....... .....++...+..++|+|||++|++++.+
T Consensus 244 ~~~~~~~l~~~d~~~~~~~~-~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 244 PRDLDVRVQLMDMDGGNVET-LFDLFGGQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp CSSEEEEEEEEETTSCSCEE-EEEEEESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred cccCceEEEEEecCCCCcee-eeccCCCCcccccceECCCCCEEEEEEec
Confidence 569999987543211 11123556678899999999999888654
No 132
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=1.2e-21 Score=176.63 Aligned_cols=260 Identities=19% Similarity=0.225 Sum_probs=172.6
Q ss_pred cccceeEEEEccCCCEEEEeeCCCcEEEEeecCC---------CceE-----EEEecCcccCeEEEEeeCCCCCCEEE--
Q 022111 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNS---------ASQH-----LATLKGHRGPVWQVAWAHPKFGSILA-- 73 (302)
Q Consensus 10 h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~---------~~~~-----~~~~~~h~~~v~~v~~~~~~~~~~l~-- 73 (302)
+...++.+++++++.++++++.|+ +++|+.... .... ...+ .|...|.+++|+++ +++|+
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spd--g~~lav~ 110 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCD--NLTLSAC 110 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTT--SCEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCC--CCEEEEE
Confidence 344578899999999999999888 899875310 0000 1112 35678999999864 78888
Q ss_pred --EEeCCCeEEEEEcCCC--------CceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeee
Q 022111 74 --SCSYDGQVIIWKEGNQ--------NDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTR 143 (302)
Q Consensus 74 --s~s~D~~i~iwd~~~~--------~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~ 143 (302)
+++.|++|+|||+++. ........+.+|...|.+++|+|+. +.+|++++.|++|++||++... ....
T Consensus 111 ~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~-~~~las~s~Dg~v~iwD~~~~~--~~~~ 187 (434)
T 2oit_A 111 MMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTV-PSMVAVCLADGSIAVLQVTETV--KVCA 187 (434)
T ss_dssp EEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSC-TTEEEEEETTSCEEEEEESSSE--EEEE
T ss_pred EeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCC-CCEEEEEECCCeEEEEEcCCCc--ceee
Confidence 8899999999998543 1122345677899999999999973 4689999999999999997542 2222
Q ss_pred ecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcc-cccccccc-ccCCCceeEEEeeCCC
Q 022111 144 IDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIW-KMDCFPAL-QMHSDWVRSVAWAPNL 221 (302)
Q Consensus 144 ~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~-~~~~~~~~-~~h~~~v~~v~~~p~~ 221 (302)
. ..|...+.+++|+|++ ++|++|+.|++|++||++.... .+.....+ ..|...|.+++|+|+.
T Consensus 188 ~-~~~~~~v~~v~wspdg--------------~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~ 252 (434)
T 2oit_A 188 T-LPSTVAVTSVCWSPKG--------------KQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTY 252 (434)
T ss_dssp E-ECGGGCEEEEEECTTS--------------SCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETT
T ss_pred c-cCCCCceeEEEEcCCC--------------CEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCc
Confidence 2 2577889999999964 7899999999999999872111 11111111 1344589999999974
Q ss_pred CCCccEEEE-EecCC------eEEEEEeccCCcc----eeeeeec-----cCCCcEEEEEEccCCCEEEEecCC--ceEE
Q 022111 222 GLPKSTIAS-ASQDG------TVVIWTCAKEGEQ----WEGRVLK-----DFKTPVWSVSWSLTGNLLAVADAN--NVTL 283 (302)
Q Consensus 222 ~~~~~~l~s-~s~D~------~i~iwd~~~~~~~----~~~~~~~-----~~~~~v~~~~~spdg~~la~~~~d--~i~~ 283 (302)
.++++ .+.|| .+++|+++..+.. +....-. ....+-..+.+-++.+++++++.. .|.+
T Consensus 253 ----~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~v 328 (434)
T 2oit_A 253 ----VFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSI 328 (434)
T ss_dssp ----EEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEE
T ss_pred ----eEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeE
Confidence 44433 33443 3899999764321 1110000 112233334444888888888775 4777
Q ss_pred eeecCCc-eEEEe
Q 022111 284 WKEAVDG-EWQQV 295 (302)
Q Consensus 284 w~~~~~~-~~~~~ 295 (302)
.....++ .|+..
T Consensus 329 l~~~~~~~~~~~~ 341 (434)
T 2oit_A 329 LARQSDQINWESW 341 (434)
T ss_dssp EEECTTSSCEEEE
T ss_pred EEecCCCCccEEE
Confidence 7764443 36543
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=1e-20 Score=175.25 Aligned_cols=245 Identities=13% Similarity=0.125 Sum_probs=173.9
Q ss_pred eeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeC----CCCCCEEEEEe-CCCeEEEEEcCC
Q 022111 14 VHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH----PKFGSILASCS-YDGQVIIWKEGN 88 (302)
Q Consensus 14 v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~----~~~~~~l~s~s-~D~~i~iwd~~~ 88 (302)
+..++|+|||++|++++.|++|++||+...+.+.+.++.. ...+..++|++ + |++|++++ .+++|.+||..+
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~d--g~~l~v~~~~~~~v~v~D~~t 257 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYE--DRYTIAGAYWPPQFAIMDGET 257 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCT--TTEEEEEEEESSEEEEEETTT
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCC--CCEEEEEEccCCeEEEEeccc
Confidence 7889999999999999999999999993223556667764 44578999986 4 78888887 489999999876
Q ss_pred CCceeEEEEecC----------C-CCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEe
Q 022111 89 QNDWTQAHTFND----------H-KSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSW 157 (302)
Q Consensus 89 ~~~~~~~~~~~~----------h-~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 157 (302)
.. +++++.. | ...+..+.++|+. ...+++...++.|.+||...........+ .+...+..+.|
T Consensus 258 ~~---~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~-~~~~vs~~~~g~i~vvd~~~~~~l~~~~i--~~~~~~~~~~~ 331 (543)
T 1nir_A 258 LE---PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEH-PEFIVNVKETGKVLLVNYKDIDNLTVTSI--GAAPFLHDGGW 331 (543)
T ss_dssp CC---EEEEEECCEECSSSCCEESCCCEEEEEECSSS-SEEEEEETTTTEEEEEECTTSSSCEEEEE--ECCSSCCCEEE
T ss_pred cc---cceeecccCcccCccccccCCceEEEEECCCC-CEEEEEECCCCeEEEEEecCCCcceeEEe--ccCcCccCceE
Confidence 53 3444432 2 2378899999974 45788888999999999875433322232 23445667888
Q ss_pred CCCCCCCceeecccCCCcee-EEEeeCCCcEEEEEEecCccccccccccc----cCCCceeEEEeeCCCCCCccEEEEEe
Q 022111 158 APAMAPGALVGLGLLDPVQK-LASCGCDNTVKVWKMYNGIWKMDCFPALQ----MHSDWVRSVAWAPNLGLPKSTIASAS 232 (302)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~-l~s~~~D~~v~iwd~~~~~~~~~~~~~~~----~h~~~v~~v~~~p~~~~~~~~l~s~s 232 (302)
+|++ ++ ++++..+++|.+||+.++. +...+. .|.+....+ ++|++ +..+++++
T Consensus 332 spdg--------------~~l~va~~~~~~v~v~D~~tg~----l~~~i~~g~~ph~g~g~~~-~~p~~---g~~~~s~~ 389 (543)
T 1nir_A 332 DSSH--------------RYFMTAANNSNKVAVIDSKDRR----LSALVDVGKTPHPGRGANF-VHPKY---GPVWSTSH 389 (543)
T ss_dssp CTTS--------------CEEEEEEGGGTEEEEEETTTTE----EEEEEECSSSBCCTTCEEE-EETTT---EEEEEEEB
T ss_pred CCCC--------------CEEEEEecCCCeEEEEECCCCe----EEEeeccCCCCCCCCCccc-CCCCC---ccEEEecc
Confidence 8864 54 4556678999999998763 222222 365544443 47874 46677876
Q ss_pred -cCCeEEEEEeccCCc---cee-eeeeccCCCcEEEEEEccCCCEEEEec--------CCceEEeeecCC
Q 022111 233 -QDGTVVIWTCAKEGE---QWE-GRVLKDFKTPVWSVSWSLTGNLLAVAD--------ANNVTLWKEAVD 289 (302)
Q Consensus 233 -~D~~i~iwd~~~~~~---~~~-~~~~~~~~~~v~~~~~spdg~~la~~~--------~d~i~~w~~~~~ 289 (302)
.|++|++||....+. .|. ...+..+...++.++|+|||++|.++. +++|.+||....
T Consensus 390 ~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~ 459 (543)
T 1nir_A 390 LGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNL 459 (543)
T ss_dssp SSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCT
T ss_pred CCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCC
Confidence 689999999976321 021 233455666788899999999999986 348999998643
No 134
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.88 E-value=7.6e-19 Score=154.05 Aligned_cols=261 Identities=12% Similarity=0.137 Sum_probs=165.4
Q ss_pred cccceeEEEEccCCCEEEEeeCC----CcEEEEeecCCC--ceEEEEecCcccCeEEEEeeCCCCCCEEEEEe-CCCeEE
Q 022111 10 HEDTVHDVAMDFYGKRLATASSD----SSIKIIGLSNSA--SQHLATLKGHRGPVWQVAWAHPKFGSILASCS-YDGQVI 82 (302)
Q Consensus 10 h~~~v~~~~~s~~~~~l~s~~~d----~~v~lw~~~~~~--~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s-~D~~i~ 82 (302)
+...+..++|+||+++|++++.+ +.|++|++.... .+.+.....+......+++ + +++|++++ .++++.
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--d--g~~l~~~~~~~~~v~ 123 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--N--GKNIVTANYSGGSIT 123 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--C--SSEEEEEETTTTEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--C--CCEEEEEECCCCEEE
Confidence 44566778999999999999886 799999987532 2344444445556677777 2 66666655 688999
Q ss_pred EEEcCCCCceeEE---EEecC--------CCCCeeEEEecCCCCCcEE-EEEecCCcEEEEEecCCCC------eee---
Q 022111 83 IWKEGNQNDWTQA---HTFND--------HKSSVNSIAWAPHELGLSL-ACGSSDGNISVFTATADGG------WDT--- 141 (302)
Q Consensus 83 iwd~~~~~~~~~~---~~~~~--------h~~~i~~l~~~pd~~~~~l-~sg~~d~~v~~~~~~~~~~------~~~--- 141 (302)
+|++......... ....+ +...+.+++|+|| +.++ +++..++.|.+|++..... +..
T Consensus 124 ~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spd--g~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~ 201 (361)
T 3scy_A 124 VFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPD--GKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGT 201 (361)
T ss_dssp EEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTT--SSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEE
T ss_pred EEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCC--CCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccc
Confidence 9998643321111 11111 1234578999998 5545 4444588999999875432 211
Q ss_pred -eeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEee-CCCcEEEEEEecCccc-cccccccccCCCceeEEEee
Q 022111 142 -TRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCG-CDNTVKVWKMYNGIWK-MDCFPALQMHSDWVRSVAWA 218 (302)
Q Consensus 142 -~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-~D~~v~iwd~~~~~~~-~~~~~~~~~h~~~v~~v~~~ 218 (302)
......+......++|+|++ ++++.++ .++.|.+||+.++... ...+.....+.....+++|+
T Consensus 202 ~~~~~~~~~~~~~~~~~spdg--------------~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~s 267 (361)
T 3scy_A 202 PEAFKVAPGSGPRHLIFNSDG--------------KFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLS 267 (361)
T ss_dssp EEEEECCTTCCEEEEEECTTS--------------SEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEEC
T ss_pred ccceecCCCCCCeEEEEcCCC--------------CEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEEC
Confidence 11222334557889999864 5555554 6899999999865321 11122233444567899999
Q ss_pred CCCCCCccEEEEEe-c-CCeEEEEEeccCCccee-eeeeccCCCcEEEEEEccCCCEEEEecCC--ceEEeeec-CCceE
Q 022111 219 PNLGLPKSTIASAS-Q-DGTVVIWTCAKEGEQWE-GRVLKDFKTPVWSVSWSLTGNLLAVADAN--NVTLWKEA-VDGEW 292 (302)
Q Consensus 219 p~~~~~~~~l~s~s-~-D~~i~iwd~~~~~~~~~-~~~~~~~~~~v~~~~~spdg~~la~~~~d--~i~~w~~~-~~~~~ 292 (302)
||+ ++|+++. . ++.|++|+++....... ...... ...+..++|+|||++|++++.+ .|.+|+.. ..|+.
T Consensus 268 pdg----~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~ 342 (361)
T 3scy_A 268 PDG----KYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLL 342 (361)
T ss_dssp TTS----SEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCE
T ss_pred CCC----CEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcE
Confidence 996 5565544 4 58999999963221111 111122 4467899999999999888743 69998764 34555
Q ss_pred EEe
Q 022111 293 QQV 295 (302)
Q Consensus 293 ~~~ 295 (302)
...
T Consensus 343 ~~~ 345 (361)
T 3scy_A 343 TDI 345 (361)
T ss_dssp EEC
T ss_pred eec
Confidence 443
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.87 E-value=8.8e-20 Score=154.10 Aligned_cols=224 Identities=16% Similarity=0.176 Sum_probs=158.0
Q ss_pred EeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCC-CCceeEEEEecCC-CCCe
Q 022111 28 TASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGN-QNDWTQAHTFNDH-KSSV 105 (302)
Q Consensus 28 s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~-~~~~~~~~~~~~h-~~~i 105 (302)
+++.|++|++||+... + ...+..|...|.+++|+++ +++|++++ ++.|.+||+.+ .. ....+..+ ...+
T Consensus 17 ~~~~~~~i~~~d~~~~--~-~~~~~~~~~~v~~~~~spd--g~~l~~~~-~~~i~~~d~~~~~~---~~~~~~~~~~~~~ 87 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTR--K-MRVVWQTPELFEAPNWSPD--GKYLLLNS-EGLLYRLSLAGDPS---PEKVDTGFATICN 87 (297)
T ss_dssp -CCCCEEEEEEETTTT--E-EEEEEEESSCCEEEEECTT--SSEEEEEE-TTEEEEEESSSCCS---CEECCCTTCCCBC
T ss_pred CCCcceeEEEEeCCCC--c-eeeeccCCcceEeeEECCC--CCEEEEEc-CCeEEEEeCCCCCC---ceEeccccccccc
Confidence 4578999999998653 2 2345568889999999874 88888876 78999999977 53 22333344 4788
Q ss_pred eEEEecCCCCCcEEEEEe--cCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEE-Eee
Q 022111 106 NSIAWAPHELGLSLACGS--SDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLA-SCG 182 (302)
Q Consensus 106 ~~l~~~pd~~~~~l~sg~--~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~-s~~ 182 (302)
.+++|+|+ +..|++++ .++...||.+...+.. ...+ .+...+..+.|+|++ +.|+ +++
T Consensus 88 ~~~~~spd--g~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~--~~~~~~~~~~~spdg--------------~~l~~~~~ 148 (297)
T 2ojh_A 88 NDHGISPD--GALYAISDKVEFGKSAIYLLPSTGGT-PRLM--TKNLPSYWHGWSPDG--------------KSFTYCGI 148 (297)
T ss_dssp SCCEECTT--SSEEEEEECTTTSSCEEEEEETTCCC-CEEC--CSSSSEEEEEECTTS--------------SEEEEEEE
T ss_pred cceEECCC--CCEEEEEEeCCCCcceEEEEECCCCc-eEEe--ecCCCccceEECCCC--------------CEEEEEEC
Confidence 99999998 66888888 4466777766532221 1222 223347888999874 4454 788
Q ss_pred CCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEe-cCCeEEEEEeccCCcceeeeeeccCCCcE
Q 022111 183 CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASAS-QDGTVVIWTCAKEGEQWEGRVLKDFKTPV 261 (302)
Q Consensus 183 ~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s-~D~~i~iwd~~~~~~~~~~~~~~~~~~~v 261 (302)
.|+.++||++..... ....+..|...+.+++|+|++ +.|+.++ .|+.++||+++..... ...+..+...+
T Consensus 149 ~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~s~dg----~~l~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~ 219 (297)
T 2ojh_A 149 RDQVFDIYSMDIDSG---VETRLTHGEGRNDGPDYSPDG----RWIYFNSSRTGQMQIWRVRVDGSS--VERITDSAYGD 219 (297)
T ss_dssp ETTEEEEEEEETTTC---CEEECCCSSSCEEEEEECTTS----SEEEEEECTTSSCEEEEEETTSSC--EEECCCCSEEE
T ss_pred CCCceEEEEEECCCC---cceEcccCCCccccceECCCC----CEEEEEecCCCCccEEEECCCCCC--cEEEecCCccc
Confidence 899999999864321 123455678889999999996 5566555 6999999998743222 12334555678
Q ss_pred EEEEEccCCCEEEEecCC------------ceEEeeecC
Q 022111 262 WSVSWSLTGNLLAVADAN------------NVTLWKEAV 288 (302)
Q Consensus 262 ~~~~~spdg~~la~~~~d------------~i~~w~~~~ 288 (302)
..++|+|+|++|++++.+ .|.+|+...
T Consensus 220 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~ 258 (297)
T 2ojh_A 220 WFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDG 258 (297)
T ss_dssp EEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTS
T ss_pred CCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCC
Confidence 999999999999888653 489999754
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=7.9e-21 Score=181.96 Aligned_cols=245 Identities=13% Similarity=0.138 Sum_probs=168.0
Q ss_pred ccceeEEEEccCCCEEEEeeC-CC-----cEEEEeecCCCceEEEEecCcc------------------------cCeEE
Q 022111 11 EDTVHDVAMDFYGKRLATASS-DS-----SIKIIGLSNSASQHLATLKGHR------------------------GPVWQ 60 (302)
Q Consensus 11 ~~~v~~~~~s~~~~~l~s~~~-d~-----~v~lw~~~~~~~~~~~~~~~h~------------------------~~v~~ 60 (302)
...+.+++|+|||++|++++. |+ +|++||+..+... ..+..|. ..|.+
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTR--LLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEE--EEECGGGTC--------------------CCEESCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCcee--EccchhhcccccccccchhhhhhhhhhhccccCcce
Confidence 346889999999999999998 88 8999998764332 3333332 23788
Q ss_pred EEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCee
Q 022111 61 VAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWD 140 (302)
Q Consensus 61 v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~ 140 (302)
++|+|+ |++|++++. +.|.+||+.++.. .....+..|...+..++|+|| |.+|++++ ++.|++|++.....
T Consensus 114 ~~~SpD--g~~l~~~~~-~~i~~~d~~~~~~-~~~~~l~~~~~~~~~~~~SPD--G~~la~~~-~~~i~~~d~~~g~~-- 184 (741)
T 2ecf_A 114 YQWSPD--AQRLLFPLG-GELYLYDLKQEGK-AAVRQLTHGEGFATDAKLSPK--GGFVSFIR-GRNLWVIDLASGRQ-- 184 (741)
T ss_dssp CEECTT--SSEEEEEET-TEEEEEESSSCST-TSCCBCCCSSSCEEEEEECTT--SSEEEEEE-TTEEEEEETTTTEE--
T ss_pred eEECCC--CCEEEEEeC-CcEEEEECCCCCc-ceEEEcccCCcccccccCCCC--CCEEEEEe-CCcEEEEecCCCCE--
Confidence 999874 899998886 9999999976510 012345667888999999998 77888887 46899999864321
Q ss_pred eeeecccCCC----------------CeEEEEeCCCCCCCceeecccCCCceeEEEeeCCC-------------------
Q 022111 141 TTRIDQAHPV----------------GVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN------------------- 185 (302)
Q Consensus 141 ~~~~~~~h~~----------------~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~------------------- 185 (302)
..+...+.. .+.++.|+|++ +.|++++.|+
T Consensus 185 -~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg--------------~~l~~~~~d~~~~~~~~~~~~~p~~~~~~ 249 (741)
T 2ecf_A 185 -MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDD--------------SAIAYARIDESPVPVQKRYEVYADRTDVI 249 (741)
T ss_dssp -EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTS--------------SCEEEEEEECTTSCEEEEEEECSSCEEEE
T ss_pred -EEeccCCccceeccccceeeeeccccccceEECCCC--------------CEEEEEEEcCCCCceEecCCCCCCcccce
Confidence 112112222 14678899874 6777776655
Q ss_pred --------------cEEEEEEec-CccccccccccccCCCceeEEEeeCCCCCCccEEEEEec-----CCeEEEEEeccC
Q 022111 186 --------------TVKVWKMYN-GIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQ-----DGTVVIWTCAKE 245 (302)
Q Consensus 186 --------------~v~iwd~~~-~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~-----D~~i~iwd~~~~ 245 (302)
.|++||+.+ +... .+.....|...+.+++| ||+ +.|+.++. +..|++||+.+.
T Consensus 250 ~~~~~~~g~~~~~~~l~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~-pDg----~~l~~~~~~~~~~~~~i~~~d~~~g 322 (741)
T 2ecf_A 250 EQRYPAAGDANVQVKLGVISPAEQAQTQ--WIDLGKEQDIYLARVNW-RDP----QHLSFQRQSRDQKKLDLVEVTLASN 322 (741)
T ss_dssp EEECCBTTSCCCEEEEEEECSSTTCCCE--EECCCSCSSEEEEEEEE-EET----TEEEEEEEETTSSEEEEEEEETTTC
T ss_pred EeecCCCCCCCCeeEEEEEECCCCCceE--EecCCCCcceEEEEEEe-CCC----CEEEEEEecccCCeEEEEEEECCCC
Confidence 788888876 5311 11111257888999999 996 66776654 567999998754
Q ss_pred CcceeeeeeccCC-C---cEEEEEEccCCCEEEEecCC-ceEEeeecCCce
Q 022111 246 GEQWEGRVLKDFK-T---PVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGE 291 (302)
Q Consensus 246 ~~~~~~~~~~~~~-~---~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~ 291 (302)
.. ..+...+. . .+.+++|+|||+++++++.+ .++||....++.
T Consensus 323 ~~---~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~ 370 (741)
T 2ecf_A 323 QQ---RVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK 370 (741)
T ss_dssp CE---EEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC
T ss_pred ce---EEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC
Confidence 31 12222222 1 34688999999988888777 588887754443
No 137
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=5e-21 Score=172.65 Aligned_cols=205 Identities=20% Similarity=0.199 Sum_probs=143.3
Q ss_pred cCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCC----------Cce---eEEEEecCCCCCeeEEEecCCCCCcEEE--
Q 022111 56 GPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQ----------NDW---TQAHTFNDHKSSVNSIAWAPHELGLSLA-- 120 (302)
Q Consensus 56 ~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~----------~~~---~~~~~~~~h~~~i~~l~~~pd~~~~~l~-- 120 (302)
..+..+++++. +.+|++++.|+ +++|+.... ... .....+ .+...|.+++|+|+ +.+|+
T Consensus 37 ~~~n~lavs~~--~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spd--g~~lav~ 110 (434)
T 2oit_A 37 ERSSLLAVSNK--YGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCD--NLTLSAC 110 (434)
T ss_dssp SCCBCEEEETT--TTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTT--SCEEEEE
T ss_pred CCccEEEEecC--CCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCC--CCEEEEE
Confidence 34677888764 57888888887 888875211 000 001112 25678999999998 66888
Q ss_pred --EEecCCcEEEEEecCC--------CCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEE
Q 022111 121 --CGSSDGNISVFTATAD--------GGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVW 190 (302)
Q Consensus 121 --sg~~d~~v~~~~~~~~--------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iw 190 (302)
+|+.|+.|++||+... ..+.......+|...|.+++|+|.. +.+|++++.|++|++|
T Consensus 111 ~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~-------------~~~las~s~Dg~v~iw 177 (434)
T 2oit_A 111 MMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTV-------------PSMVAVCLADGSIAVL 177 (434)
T ss_dssp EEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSC-------------TTEEEEEETTSCEEEE
T ss_pred EeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCC-------------CCEEEEEECCCeEEEE
Confidence 8899999999998642 1111122233688899999999963 3689999999999999
Q ss_pred EEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeec----cCCCcEEEEEE
Q 022111 191 KMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLK----DFKTPVWSVSW 266 (302)
Q Consensus 191 d~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~----~~~~~v~~~~~ 266 (302)
|++++. ......+|...|.+++|+|++ ++|++|+.|++|++||++.. ......... ++...|.+++|
T Consensus 178 D~~~~~----~~~~~~~~~~~v~~v~wspdg----~~lasgs~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~~~v~~v~w 248 (434)
T 2oit_A 178 QVTETV----KVCATLPSTVAVTSVCWSPKG----KQLAVGKQNGTVVQYLPTLQ-EKKVIPCPPFYESDHPVRVLDVLW 248 (434)
T ss_dssp EESSSE----EEEEEECGGGCEEEEEECTTS----SCEEEEETTSCEEEECTTCC-EEEEECCCTTCCTTSCEEEEEEEE
T ss_pred EcCCCc----ceeeccCCCCceeEEEEcCCC----CEEEEEcCCCcEEEEccCCc-ccccccCCcccCCCCceeEEEEEE
Confidence 998762 223445688999999999995 78999999999999998721 111000111 12337999999
Q ss_pred ccCCCEEEEec-CC-------ceEEeeecC
Q 022111 267 SLTGNLLAVAD-AN-------NVTLWKEAV 288 (302)
Q Consensus 267 spdg~~la~~~-~d-------~i~~w~~~~ 288 (302)
++++.++++.+ .+ .+++|+...
T Consensus 249 ~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 249 IGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp EETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred ecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 99988875542 11 388999743
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.86 E-value=1.3e-18 Score=150.43 Aligned_cols=243 Identities=14% Similarity=0.127 Sum_probs=154.3
Q ss_pred EEEEeeCCCcEEEEeecC-CCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCC-CeEEEEEcC--CCCceeEEEEecC
Q 022111 25 RLATASSDSSIKIIGLSN-SASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYD-GQVIIWKEG--NQNDWTQAHTFND 100 (302)
Q Consensus 25 ~l~s~~~d~~v~lw~~~~-~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D-~~i~iwd~~--~~~~~~~~~~~~~ 100 (302)
.+++++.|+.|++|++.. +..+.+..+ .|...+..++|+++ +++|++++.+ +.|++|++. ++ ....+..+..
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spd--g~~l~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~ 82 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPD--KRYLYVGVRPEFRVLAYRIAPDDG-ALTFAAESAL 82 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTT--SSEEEEEETTTTEEEEEEECTTTC-CEEEEEEEEC
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCC--CCEEEEeecCCCeEEEEEecCCCC-ceeecccccc
Confidence 444557899999999953 222333333 46778889999864 7888888776 999999986 32 2334444544
Q ss_pred CCCCeeEEEecCCCCCcEEEEEe-cCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEE
Q 022111 101 HKSSVNSIAWAPHELGLSLACGS-SDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLA 179 (302)
Q Consensus 101 h~~~i~~l~~~pd~~~~~l~sg~-~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~ 179 (302)
+. .+..++|+|+ +..|++++ .++.|.+|++............ .....+.+++|+|++ ++|+
T Consensus 83 ~~-~~~~~~~s~d--g~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~dg--------------~~l~ 144 (343)
T 1ri6_A 83 PG-SLTHISTDHQ--GQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV-EGLDGCHSANISPDN--------------RTLW 144 (343)
T ss_dssp SS-CCSEEEECTT--SSEEEEEETTTTEEEEEEEETTEEEEEEEEE-CCCTTBCCCEECTTS--------------SEEE
T ss_pred CC-CCcEEEEcCC--CCEEEEEecCCCeEEEEECCCCccccccccc-cCCCCceEEEECCCC--------------CEEE
Confidence 33 7899999998 55565554 5889999998521111111111 223347778888864 5555
Q ss_pred Eee-CCCcEEEEEEec-Ccccccccc--cccc-CCCceeEEEeeCCCCCCccEE-EEEecCCeEEEEEeccCCccee-ee
Q 022111 180 SCG-CDNTVKVWKMYN-GIWKMDCFP--ALQM-HSDWVRSVAWAPNLGLPKSTI-ASASQDGTVVIWTCAKEGEQWE-GR 252 (302)
Q Consensus 180 s~~-~D~~v~iwd~~~-~~~~~~~~~--~~~~-h~~~v~~v~~~p~~~~~~~~l-~s~s~D~~i~iwd~~~~~~~~~-~~ 252 (302)
+++ .++.|++||+.+ +... ... .+.. ....+.+++|+|++ +.+ +++..++.|++|+++....... ..
T Consensus 145 ~~~~~~~~v~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~pdg----~~l~~~~~~~~~i~~~~~~~~~g~~~~~~ 218 (343)
T 1ri6_A 145 VPALKQDRICLFTVSDDGHLV--AQDPAEVTTVEGAGPRHMVFHPNE----QYAYCVNELNSSVDVWELKDPHGNIECVQ 218 (343)
T ss_dssp EEEGGGTEEEEEEECTTSCEE--EEEEEEEECSTTCCEEEEEECTTS----SEEEEEETTTTEEEEEESSCTTSCCEEEE
T ss_pred EecCCCCEEEEEEecCCCcee--eecccccccCCCCCcceEEECCCC----CEEEEEeCCCCEEEEEEecCCCCcEEEEe
Confidence 555 899999999986 4211 111 1222 23568899999996 444 5556899999999964221111 11
Q ss_pred eec----cC--CCcEEEEEEccCCCEEEEec-CC-ceEEeeecC-CceEEEe
Q 022111 253 VLK----DF--KTPVWSVSWSLTGNLLAVAD-AN-NVTLWKEAV-DGEWQQV 295 (302)
Q Consensus 253 ~~~----~~--~~~v~~~~~spdg~~la~~~-~d-~i~~w~~~~-~~~~~~~ 295 (302)
... .+ ...+..++|+|+|++|+++. .+ .|.+|+... .+.+...
T Consensus 219 ~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~ 270 (343)
T 1ri6_A 219 TLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKE 270 (343)
T ss_dssp EEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEE
T ss_pred eccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEe
Confidence 111 11 23567899999999887554 44 799999863 3334443
No 139
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.86 E-value=4e-19 Score=153.54 Aligned_cols=250 Identities=11% Similarity=0.040 Sum_probs=161.0
Q ss_pred cccceeEEEEccCCCEEEEeeC-CCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCC---eEEEEE
Q 022111 10 HEDTVHDVAMDFYGKRLATASS-DSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDG---QVIIWK 85 (302)
Q Consensus 10 h~~~v~~~~~s~~~~~l~s~~~-d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~---~i~iwd 85 (302)
+...+ .++|+|++++|++++. ++.|++||...... ....+..+..+..+++|+++ +++|+++..++ .|.+||
T Consensus 39 ~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~~~~i~v~d 114 (331)
T 3u4y_A 39 GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP-KVVAIQEGQSSMADVDITPD--DQFAVTVTGLNHPFNMQSYS 114 (331)
T ss_dssp CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC-EEEEEEECSSCCCCEEECTT--SSEEEECCCSSSSCEEEEEE
T ss_pred cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce-eEEecccCCCCccceEECCC--CCEEEEecCCCCcccEEEEE
Confidence 34455 8999999997776665 88999999866432 14455556666555999864 78888555442 999999
Q ss_pred cCCCCceeEEEEecCCCCCeeEEEecCCCCCc-EEEEEecCCc-EEEEEecCCCCeeee-eecccCCCCeEEEEeCCCCC
Q 022111 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGL-SLACGSSDGN-ISVFTATADGGWDTT-RIDQAHPVGVTSVSWAPAMA 162 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~-~l~sg~~d~~-v~~~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~ 162 (302)
+.+.. ....+.. ...+.+++|+|+ +. +++++..++. +.+|++...+..... ............+.|+|++
T Consensus 115 ~~~~~---~~~~~~~-~~~~~~~~~spd--g~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg- 187 (331)
T 3u4y_A 115 FLKNK---FISTIPI-PYDAVGIAISPN--GNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDG- 187 (331)
T ss_dssp TTTTE---EEEEEEC-CTTEEEEEECTT--SSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTS-
T ss_pred CCCCC---eEEEEEC-CCCccceEECCC--CCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCC-
Confidence 97653 3444443 345689999998 44 4555566688 999998755432111 0001233457888998864
Q ss_pred CCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEE-EEEecCCeEEEEE
Q 022111 163 PGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTI-ASASQDGTVVIWT 241 (302)
Q Consensus 163 ~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l-~s~s~D~~i~iwd 241 (302)
...++++..++.|++||+.++.. ...+..+. +...+.+++|+|++ ++| ++...++.|.+||
T Consensus 188 ------------~~l~v~~~~~~~v~v~d~~~~~~-~~~~~~~~-~~~~~~~~~~spdg----~~l~v~~~~~~~i~~~d 249 (331)
T 3u4y_A 188 ------------NFAFVANLIGNSIGILETQNPEN-ITLLNAVG-TNNLPGTIVVSRDG----STVYVLTESTVDVFNFN 249 (331)
T ss_dssp ------------SEEEEEETTTTEEEEEECSSTTS-CEEEEEEE-CSSCCCCEEECTTS----SEEEEECSSEEEEEEEE
T ss_pred ------------CEEEEEeCCCCeEEEEECCCCcc-cceeeecc-CCCCCceEEECCCC----CEEEEEEcCCCEEEEEE
Confidence 13556667789999999986632 01122333 33567899999996 544 4555688899999
Q ss_pred eccCCcceeeeeecc---CCC---cEEEEEEccCCCEEEEecCC--ceEEeeecC
Q 022111 242 CAKEGEQWEGRVLKD---FKT---PVWSVSWSLTGNLLAVADAN--NVTLWKEAV 288 (302)
Q Consensus 242 ~~~~~~~~~~~~~~~---~~~---~v~~~~~spdg~~la~~~~d--~i~~w~~~~ 288 (302)
+.............. ... ....++|+|||++|++++.+ .|.+|+...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 250 QLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp TTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred CCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 875321111111111 111 12458999999988766554 699999753
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.86 E-value=1.2e-20 Score=180.16 Aligned_cols=231 Identities=9% Similarity=0.082 Sum_probs=154.2
Q ss_pred ceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCccc---CeEEEEeeCCCCCCEEEEEeCC---------Ce
Q 022111 13 TVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRG---PVWQVAWAHPKFGSILASCSYD---------GQ 80 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~---~v~~v~~~~~~~~~~l~s~s~D---------~~ 80 (302)
.+.+++|+|||+++++ +.|++|++||..++. ....+.+|.. .|.+++|+|+ |++|++++.+ +.
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~--~~~~~~~~~~~~~~v~~~~~SpD--g~~l~~~~~~~~~~~~~~~~~ 92 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNT--STVLIEGKKIESLRAIRYEISPD--REYALFSYNVEPIYQHSYTGY 92 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCC--CEEEECTTTTTTTTCSEEEECTT--SSEEEEEESCCCCSSSCCCSE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCc--EEEEeccccccccccceEEECCC--CCEEEEEecCccceeecceee
Confidence 4677899999997776 789999999987643 3344555654 4899999875 8999998875 77
Q ss_pred EEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCC----------
Q 022111 81 VIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPV---------- 150 (302)
Q Consensus 81 i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~---------- 150 (302)
+.+||+.++.. ..+.....|...+..++|+|| |+.||.++. +.|++|++.......+.. .+..
T Consensus 93 i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPd--G~~la~~~~-~~i~~~~~~~g~~~~~~~---~~~~~~~~~g~~~~ 165 (723)
T 1xfd_A 93 YVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPK--GQQLIFIFE-NNIYYCAHVGKQAIRVVS---TGKEGVIYNGLSDW 165 (723)
T ss_dssp EEEEESSSCCC-EECCCTTCCSCCCSBCCBCSS--TTCEEEEET-TEEEEESSSSSCCEEEEC---CCBTTTEEEEECCH
T ss_pred EEEEECCCCce-EeccCCccccccccccEECCC--CCEEEEEEC-CeEEEEECCCCceEEEec---CCCCCceECcccce
Confidence 88999977542 222233345556899999999 678888876 789999886543322221 2222
Q ss_pred --------CeEEEEeCCCCCCCceeecccCCCceeEEEeeCCC----------------------------------cEE
Q 022111 151 --------GVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN----------------------------------TVK 188 (302)
Q Consensus 151 --------~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~----------------------------------~v~ 188 (302)
.+.++.|+|++ +.|++++.|+ .|+
T Consensus 166 v~~ee~~~~~~~~~~SpDg--------------~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~ 231 (723)
T 1xfd_A 166 LYEEEILKTHIAHWWSPDG--------------TRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLH 231 (723)
T ss_dssp HHHHTTSSSSEEEEECTTS--------------SEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEE
T ss_pred eEEEEeccCcceEEECCCC--------------CEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEE
Confidence 23789999974 5666665432 788
Q ss_pred EEEEecCcccccc--ccccccCCCceeEEEeeCCCCCCccEEEEEec----CCeEEEEEeccCCcceeeeee-ccCCCcE
Q 022111 189 VWKMYNGIWKMDC--FPALQMHSDWVRSVAWAPNLGLPKSTIASASQ----DGTVVIWTCAKEGEQWEGRVL-KDFKTPV 261 (302)
Q Consensus 189 iwd~~~~~~~~~~--~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~----D~~i~iwd~~~~~~~~~~~~~-~~~~~~v 261 (302)
+||+.++...... ...+..|...+.+++|+||+ +.|++.+. +..|++||+..... . .+. ..+...+
T Consensus 232 ~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg----~~l~~~~~~~~~~~~i~~~d~~~g~~--~-~~~~~~~~~~~ 304 (723)
T 1xfd_A 232 VIGLNGPTHDLEMMPPDDPRMREYYITMVKWATST----KVAVTWLNRAQNVSILTLCDATTGVC--T-KKHEDESEAWL 304 (723)
T ss_dssp EEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSS----EEEEEEEETTSCEEEEEEEETTTCCE--E-EEEEEECSSCC
T ss_pred EEECCCCceeEEeeCCccCCCccceeEEEEEeCCC----eEEEEEEcCCCCeEEEEEEeCCCCcc--e-EEEEeccCCEE
Confidence 9998765311110 01122346789999999996 66766653 35799999865421 1 121 1222333
Q ss_pred ----EEEEEccCCCEEEEe
Q 022111 262 ----WSVSWSLTGNLLAVA 276 (302)
Q Consensus 262 ----~~~~~spdg~~la~~ 276 (302)
..++|||||+.|+.+
T Consensus 305 ~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 305 HRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp CCCCCCCEECTTSCSEEEE
T ss_pred eccCCCceEcCCCCeEEEE
Confidence 278999999987754
No 141
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.85 E-value=7.1e-19 Score=162.86 Aligned_cols=255 Identities=9% Similarity=0.082 Sum_probs=175.4
Q ss_pred cccceeEEEEcc----CCCEEEEee-CCCcEEEEeecCCCceEEEEecC----------ccc-CeEEEEeeCCCCCCEEE
Q 022111 10 HEDTVHDVAMDF----YGKRLATAS-SDSSIKIIGLSNSASQHLATLKG----------HRG-PVWQVAWAHPKFGSILA 73 (302)
Q Consensus 10 h~~~v~~~~~s~----~~~~l~s~~-~d~~v~lw~~~~~~~~~~~~~~~----------h~~-~v~~v~~~~~~~~~~l~ 73 (302)
+...+..++|+| ||++|++++ .+++|.+||... .+++..+.. |.. .+..+.++++ .+.+++
T Consensus 220 ~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t--~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~-~~~~~v 296 (543)
T 1nir_A 220 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET--LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHE-HPEFIV 296 (543)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT--CCEEEEEECCEECSSSCCEESCCCEEEEEECSS-SSEEEE
T ss_pred cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc--cccceeecccCcccCccccccCCceEEEEECCC-CCEEEE
Confidence 344578899999 999999988 489999999754 344555443 323 6888999875 356788
Q ss_pred EEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEE-EEEecCCcEEEEEecCCCCeeeeee-cccCCCC
Q 022111 74 SCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSL-ACGSSDGNISVFTATADGGWDTTRI-DQAHPVG 151 (302)
Q Consensus 74 s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l-~sg~~d~~v~~~~~~~~~~~~~~~~-~~~h~~~ 151 (302)
+...+++|.+||..+..... ...+. +...+..++|+|+ +.++ +++..+++|.+||..+......... ...|...
T Consensus 297 s~~~~g~i~vvd~~~~~~l~-~~~i~-~~~~~~~~~~spd--g~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~ 372 (543)
T 1nir_A 297 NVKETGKVLLVNYKDIDNLT-VTSIG-AAPFLHDGGWDSS--HRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGR 372 (543)
T ss_dssp EETTTTEEEEEECTTSSSCE-EEEEE-CCSSCCCEEECTT--SCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTT
T ss_pred EECCCCeEEEEEecCCCcce-eEEec-cCcCccCceECCC--CCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCC
Confidence 88999999999987653221 22333 5667889999998 5554 4556789999999875422221111 1124433
Q ss_pred eEEEEeCCCCCCCceeecccCCCceeEEEee-CCCcEEEEEEecCc---cccccccccccCCCceeEEEeeCCCCCCccE
Q 022111 152 VTSVSWAPAMAPGALVGLGLLDPVQKLASCG-CDNTVKVWKMYNGI---WKMDCFPALQMHSDWVRSVAWAPNLGLPKST 227 (302)
Q Consensus 152 v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-~D~~v~iwd~~~~~---~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~ 227 (302)
...+ ++|+. +..++|+. .|++|.|||+.+.. ...++++++.+|...+..|+|+|++ +.
T Consensus 373 g~~~-~~p~~-------------g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg----~~ 434 (543)
T 1nir_A 373 GANF-VHPKY-------------GPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKS----SH 434 (543)
T ss_dssp CEEE-EETTT-------------EEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTC----CE
T ss_pred Cccc-CCCCC-------------ccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCC----Cc
Confidence 2222 23432 46678875 68999999997621 1135677888898889999999996 77
Q ss_pred EEEEe-------cCCeEEEEEeccCCcceeeee-------eccCCCcEEEEEEccCCCEEEEe--c---CC-ceEEeeec
Q 022111 228 IASAS-------QDGTVVIWTCAKEGEQWEGRV-------LKDFKTPVWSVSWSLTGNLLAVA--D---AN-NVTLWKEA 287 (302)
Q Consensus 228 l~s~s-------~D~~i~iwd~~~~~~~~~~~~-------~~~~~~~v~~~~~spdg~~la~~--~---~d-~i~~w~~~ 287 (302)
|.+++ .+++|++||+.+...... .+ +.++...++.++|+|||+.|.++ + .+ .|.+||..
T Consensus 435 l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~ 513 (543)
T 1nir_A 435 LYVDTTFNPDARISQSVAVFDLKNLDAKYQ-VLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDK 513 (543)
T ss_dssp EEECCTTCSSHHHHTCEEEEETTCTTSCCE-EECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETT
T ss_pred EEEecCCCCCcccCceEEEEECCCCCCCeE-EeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECC
Confidence 88877 378999999986543211 11 12445679999999999999866 2 23 79999976
Q ss_pred CCc
Q 022111 288 VDG 290 (302)
Q Consensus 288 ~~~ 290 (302)
...
T Consensus 514 t~~ 516 (543)
T 1nir_A 514 TLK 516 (543)
T ss_dssp TTE
T ss_pred Cce
Confidence 533
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.85 E-value=6e-20 Score=175.84 Aligned_cols=242 Identities=12% Similarity=0.118 Sum_probs=165.2
Q ss_pred ceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCce
Q 022111 13 TVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDW 92 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~ 92 (302)
.|.+++|||||++|++++. ++|++|++..........+..|...+..++|+|+ |++|++++ ++.|.+||+.++.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPD--G~~la~~~-~~~i~~~d~~~g~-- 183 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPK--GGFVSFIR-GRNLWVIDLASGR-- 183 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTT--SSEEEEEE-TTEEEEEETTTTE--
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCC--CCEEEEEe-CCcEEEEecCCCC--
Confidence 4788999999999998886 9999999875410023456678888999999875 89998887 4699999987642
Q ss_pred eEEEEecCCCCC----------------eeEEEecCCCCCcEEEEEecCC------------------------------
Q 022111 93 TQAHTFNDHKSS----------------VNSIAWAPHELGLSLACGSSDG------------------------------ 126 (302)
Q Consensus 93 ~~~~~~~~h~~~----------------i~~l~~~pd~~~~~l~sg~~d~------------------------------ 126 (302)
.......+... +..++|+|| |..|++++.|+
T Consensus 184 -~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpD--g~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~ 260 (741)
T 2ecf_A 184 -QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPD--DSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDAN 260 (741)
T ss_dssp -EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTT--SSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCC
T ss_pred -EEEeccCCccceeccccceeeeeccccccceEECCC--CCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCC
Confidence 22222223322 478999998 67888887765
Q ss_pred ---cEEEEEecC-CCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEee-----CCCcEEEEEEecCcc
Q 022111 127 ---NISVFTATA-DGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCG-----CDNTVKVWKMYNGIW 197 (302)
Q Consensus 127 ---~v~~~~~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-----~D~~v~iwd~~~~~~ 197 (302)
.|.+||+.. ..... ......|...+..++| |++ +.|+.++ .+..|++||+.++..
T Consensus 261 ~~~~l~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~-pDg--------------~~l~~~~~~~~~~~~~i~~~d~~~g~~ 324 (741)
T 2ecf_A 261 VQVKLGVISPAEQAQTQW-IDLGKEQDIYLARVNW-RDP--------------QHLSFQRQSRDQKKLDLVEVTLASNQQ 324 (741)
T ss_dssp CEEEEEEECSSTTCCCEE-ECCCSCSSEEEEEEEE-EET--------------TEEEEEEEETTSSEEEEEEEETTTCCE
T ss_pred CeeEEEEEECCCCCceEE-ecCCCCcceEEEEEEe-CCC--------------CEEEEEEecccCCeEEEEEEECCCCce
Confidence 677777754 32211 1111135667889999 974 5666544 356799999877632
Q ss_pred ccccccccccCC-C---ceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEE-EEccCCCE
Q 022111 198 KMDCFPALQMHS-D---WVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSV-SWSLTGNL 272 (302)
Q Consensus 198 ~~~~~~~~~~h~-~---~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~-~~spdg~~ 272 (302)
...+..|. . .+.+++|+||+ +.+++++.|+.++||.++.... ...+..+...+.++ +|||||+.
T Consensus 325 ----~~~~~~~~~~~~~~~~~~~~spdg----~~~~~~~~~g~~~l~~~~~~~~---~~~l~~~~~~v~~~~~~s~dg~~ 393 (741)
T 2ecf_A 325 ----RVLAHETSPTWVPLHNSLRFLDDG----SILWSSERTGFQHLYRIDSKGK---AAALTHGNWSVDELLAVDEKAGL 393 (741)
T ss_dssp ----EEEEEEECSSCCCCCSCCEECTTS----CEEEEECTTSSCEEEEECSSSC---EEESCCSSSCEEEEEEEETTTTE
T ss_pred ----EEEEEcCCCCcCCcCCceEECCCC----eEEEEecCCCccEEEEEcCCCC---eeeeeecceEEEeEeEEeCCCCE
Confidence 12222232 2 35689999996 5888999999999998764322 13334555678777 59999987
Q ss_pred EEEe-cCC---ceEEeeecCCc
Q 022111 273 LAVA-DAN---NVTLWKEAVDG 290 (302)
Q Consensus 273 la~~-~~d---~i~~w~~~~~~ 290 (302)
|+.. +.+ .++||+...++
T Consensus 394 l~~~~~~~~~~~~~l~~~~~~g 415 (741)
T 2ecf_A 394 AYFRAGIESARESQIYAVPLQG 415 (741)
T ss_dssp EEEEECSSCTTCBEEEEEETTC
T ss_pred EEEEEeCCCCceEEEEEEEcCC
Confidence 7544 433 58999986534
No 143
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.85 E-value=2.4e-20 Score=174.09 Aligned_cols=233 Identities=10% Similarity=0.077 Sum_probs=163.0
Q ss_pred cccceeEEEEccCCCEEEEeeC-CCcEEEEeecCCCceEEEEecCcc-cCeEEEEeeCCCCCCEEEEEeC---CCeEEEE
Q 022111 10 HEDTVHDVAMDFYGKRLATASS-DSSIKIIGLSNSASQHLATLKGHR-GPVWQVAWAHPKFGSILASCSY---DGQVIIW 84 (302)
Q Consensus 10 h~~~v~~~~~s~~~~~l~s~~~-d~~v~lw~~~~~~~~~~~~~~~h~-~~v~~v~~~~~~~~~~l~s~s~---D~~i~iw 84 (302)
+..+|++++|+|||++||.++. |++++||++..+ + ...+..|. ..+..++|+|+ +++++++. +...+||
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g--~-~~~lt~~~~~~~~~~~~spd---~~l~~~~~~~g~~~~~l~ 93 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG--E-TVKLNREPINSVLDPHYGVG---RVILVRDVSKGAEQHALF 93 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETT--E-EEECCSSCCSEECEECTTCS---EEEEEEECSTTSCCEEEE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCC--C-cEeeecccccccccccCCCC---eEEEEeccCCCCcceEEE
Confidence 3568999999999999999887 999999998543 2 34455555 57899999853 67777765 5667787
Q ss_pred EcCC--CCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCC
Q 022111 85 KEGN--QNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMA 162 (302)
Q Consensus 85 d~~~--~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 162 (302)
.+.. ... .. .+... ..+...+|+||..+..+++++.++ +.+||+..... ..+. .+.. .++.|+|+
T Consensus 94 ~~~~~~~g~--~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~---~~l~-~~~~--~~~~~spD-- 160 (582)
T 3o4h_A 94 KVNTSRPGE--EQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDR-VALYALDGGGL---RELA-RLPG--FGFVSDIR-- 160 (582)
T ss_dssp EEETTSTTC--CE-ECTTS-CSBEEEEEEECSSCEEEEEECSSC-EEEEEEETTEE---EEEE-EESS--CEEEEEEE--
T ss_pred EEeccCCCc--cc-cccCC-CCceeeeeCCCCCeEEEEecCCCC-ceEEEccCCcE---EEee-cCCC--ceEEECCC--
Confidence 6643 221 11 33322 234567888885445566655555 45999875422 2222 1222 67888886
Q ss_pred CCceeecccCCCceeEEEeeCC----CcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCC--e
Q 022111 163 PGALVGLGLLDPVQKLASCGCD----NTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDG--T 236 (302)
Q Consensus 163 ~~~~~~~~~~~~~~~l~s~~~D----~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~--~ 236 (302)
|+.|++++.| ..|++||+.++. ...+..|.+.+.+++|+||+ +.|++++.++ .
T Consensus 161 ------------G~~la~~~~~~~~~~~i~~~d~~~g~-----~~~l~~~~~~~~~~~~SpDG----~~l~~~~~~~~~~ 219 (582)
T 3o4h_A 161 ------------GDLIAGLGFFGGGRVSLFTSNLSSGG-----LRVFDSGEGSFSSASISPGM----KVTAGLETAREAR 219 (582)
T ss_dssp ------------TTEEEEEEEEETTEEEEEEEETTTCC-----CEEECCSSCEEEEEEECTTS----CEEEEEECSSCEE
T ss_pred ------------CCEEEEEEEcCCCCeEEEEEcCCCCC-----ceEeecCCCccccceECCCC----CEEEEccCCCeeE
Confidence 4788887777 779999987763 23567788899999999996 7788888888 8
Q ss_pred EEEEEeccCCcceeeeeeccCCCcEEEEE--------EccCCCEEEEecCC-ceEEeee
Q 022111 237 VVIWTCAKEGEQWEGRVLKDFKTPVWSVS--------WSLTGNLLAVADAN-NVTLWKE 286 (302)
Q Consensus 237 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~--------~spdg~~la~~~~d-~i~~w~~ 286 (302)
|++||+..... ..+.++...+.+++ |||||.++++++.+ .++||+.
T Consensus 220 i~~~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 220 LVTVDPRDGSV----EDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEECTTTCCE----EECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred EEEEcCCCCcE----EEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 99999875421 13445555555566 99999888888777 7999997
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.84 E-value=1.4e-18 Score=165.61 Aligned_cols=245 Identities=12% Similarity=0.079 Sum_probs=162.5
Q ss_pred ccccceeEEEEccCCCEEEEeeCCCcEEEEeecC-----CCceEEEEecCcccC--------------eEEEEeeCCCCC
Q 022111 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSN-----SASQHLATLKGHRGP--------------VWQVAWAHPKFG 69 (302)
Q Consensus 9 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~-----~~~~~~~~~~~h~~~--------------v~~v~~~~~~~~ 69 (302)
.+...+.+++|+|||++||.+ .|++|++|++.. +... .....+... +.+++|+|+ |
T Consensus 118 ~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~--~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpD--g 192 (706)
T 2z3z_A 118 DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAI--AVTIDGTETLVYGQAVHQREFGIEKGTFWSPK--G 192 (706)
T ss_dssp CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCE--ESCSCCBTTEEESSCCGGGCTTCCCSEEECTT--S
T ss_pred CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcE--EeccCCCCCeEcccchhhhhcCCCceEEECCC--C
Confidence 456678889999999999985 689999999875 4322 222233332 478999875 8
Q ss_pred CEEEEEe---------------------------------CCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCC
Q 022111 70 SILASCS---------------------------------YDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELG 116 (302)
Q Consensus 70 ~~l~s~s---------------------------------~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~ 116 (302)
++|++++ .+..|.+||+.++.. ..+.....|...+.+++|+|| |
T Consensus 193 ~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~spd--g 269 (706)
T 2z3z_A 193 SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT-VYLQTGEPKEKFLTNLSWSPD--E 269 (706)
T ss_dssp SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE-EECCCCSCTTCEEEEEEECTT--S
T ss_pred CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce-EeeccCCCCceeEeeEEEECC--C
Confidence 9999887 456799999876521 111111246778999999998 6
Q ss_pred cEEEEEecCC-----cEEEEEecCCCCeeeeeecccCCC---CeEEEEeCC--CCCCCceeecccCCCceeEEEeeCCCc
Q 022111 117 LSLACGSSDG-----NISVFTATADGGWDTTRIDQAHPV---GVTSVSWAP--AMAPGALVGLGLLDPVQKLASCGCDNT 186 (302)
Q Consensus 117 ~~l~sg~~d~-----~v~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~--~~~~~~~~~~~~~~~~~~l~s~~~D~~ 186 (302)
..|++++.++ .|.+||..+........ ...+.. .+..+.|+| + +++|++++.|+.
T Consensus 270 ~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~~sp~~d--------------g~~l~~~~~~g~ 334 (706)
T 2z3z_A 270 NILYVAEVNRAQNECKVNAYDAETGRFVRTLF-VETDKHYVEPLHPLTFLPGSN--------------NQFIWQSRRDGW 334 (706)
T ss_dssp SEEEEEEECTTSCEEEEEEEETTTCCEEEEEE-EEECSSCCCCCSCCEECTTCS--------------SEEEEEECTTSS
T ss_pred CEEEEEEeCCCCCeeEEEEEECCCCceeeEEE-EccCCCeECccCCceeecCCC--------------CEEEEEEccCCc
Confidence 6888887776 89999976542222111 111221 235678887 5 478899999999
Q ss_pred EEEEEEecCccccccccccccCCCceeE-EEeeCCCCCCccEE-EEEecCC----eEEEEEeccCCcceeeeeeccCCCc
Q 022111 187 VKVWKMYNGIWKMDCFPALQMHSDWVRS-VAWAPNLGLPKSTI-ASASQDG----TVVIWTCAKEGEQWEGRVLKDFKTP 260 (302)
Q Consensus 187 v~iwd~~~~~~~~~~~~~~~~h~~~v~~-v~~~p~~~~~~~~l-~s~s~D~----~i~iwd~~~~~~~~~~~~~~~~~~~ 260 (302)
++||++.... .....+..|...+.+ ++|+|++ +.| ++++.++ .|..||..... ...+ .+...
T Consensus 335 ~~l~~~~~~~---~~~~~l~~~~~~v~~~~~~spdg----~~l~~~~~~~~~~~~~l~~~d~~~~~----~~~l-~~~~~ 402 (706)
T 2z3z_A 335 NHLYLYDTTG---RLIRQVTKGEWEVTNFAGFDPKG----TRLYFESTEASPLERHFYCIDIKGGK----TKDL-TPESG 402 (706)
T ss_dssp CEEEEEETTS---CEEEECCCSSSCEEEEEEECTTS----SEEEEEESSSCTTCBEEEEEETTCCC----CEES-CCSSS
T ss_pred cEEEEEECCC---CEEEecCCCCeEEEeeeEEcCCC----CEEEEEecCCCCceEEEEEEEcCCCC----ceec-cCCCc
Confidence 9999987221 223455667777877 8999996 445 4455554 44444543321 1122 24556
Q ss_pred EEEEEEccCCCEEEEecCC-----ceEEeeecC
Q 022111 261 VWSVSWSLTGNLLAVADAN-----NVTLWKEAV 288 (302)
Q Consensus 261 v~~~~~spdg~~la~~~~d-----~i~~w~~~~ 288 (302)
+.+++|||||++|+.+..+ .+.+|+...
T Consensus 403 ~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 403 MHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp EEEEEECTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred eEEEEECCCCCEEEEEecCCCCCcEEEEEECCC
Confidence 8999999999998776332 399999754
No 145
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.83 E-value=4.8e-19 Score=176.01 Aligned_cols=231 Identities=8% Similarity=0.031 Sum_probs=174.4
Q ss_pred ceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecC-----------cccCeEEEEee-CCCCCCEEEEEeCCCe
Q 022111 13 TVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKG-----------HRGPVWQVAWA-HPKFGSILASCSYDGQ 80 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~-----------h~~~v~~v~~~-~~~~~~~l~s~s~D~~ 80 (302)
.+...+|+|||++|+.+ .++.|++|++... .+..+.+ |...+..++|+ |+ |++|++++ ++.
T Consensus 246 ~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~---~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pd--G~~la~~~-~~~ 318 (1045)
T 1k32_A 246 DYYPRHLNTDGRRILFS-KGGSIYIFNPDTE---KIEKIEIGDLESPEDRIISIPSKFAEDFSPLD--GDLIAFVS-RGQ 318 (1045)
T ss_dssp SSCEEEEEESSSCEEEE-ETTEEEEECTTTC---CEEECCCCCCCBCCSEEEECGGGGEEEEEECG--GGCEEEEE-TTE
T ss_pred CcceeeEcCCCCEEEEE-eCCEEEEecCCce---EeeeeccCcccccccccccccccceeeecCCC--CCEEEEEE-cCE
Confidence 35667999999999887 5899999998322 2334444 45578999998 75 88888877 789
Q ss_pred EEEEEcCCCCceeEEEEecCCCC-CeeEEEecCCCCCcEEEEEecCCcEE-EEEecCCCCeeeeeecccCCCCeEEEEeC
Q 022111 81 VIIWKEGNQNDWTQAHTFNDHKS-SVNSIAWAPHELGLSLACGSSDGNIS-VFTATADGGWDTTRIDQAHPVGVTSVSWA 158 (302)
Q Consensus 81 i~iwd~~~~~~~~~~~~~~~h~~-~i~~l~~~pd~~~~~l~sg~~d~~v~-~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 158 (302)
+.+|+..... ...+..|.. .+..++|+ | +..|+.++.+..+. +|+..... ...+. .|...+..++|+
T Consensus 319 i~~~~~~~~~----~~~~~~~~~~~~~~~~~s-d--g~~l~~~s~~~~l~~~~d~~~~~---~~~l~-~~~~~~~~~~~S 387 (1045)
T 1k32_A 319 AFIQDVSGTY----VLKVPEPLRIRYVRRGGD-T--KVAFIHGTREGDFLGIYDYRTGK---AEKFE-ENLGNVFAMGVD 387 (1045)
T ss_dssp EEEECTTSSB----EEECSCCSCEEEEEECSS-S--EEEEEEEETTEEEEEEEETTTCC---EEECC-CCCCSEEEEEEC
T ss_pred EEEEcCCCCc----eEEccCCCcceEEeeeEc-C--CCeEEEEECCCceEEEEECCCCC---ceEec-CCccceeeeEEC
Confidence 9999986542 334566777 89999999 7 77888888888787 88875332 22333 566788999999
Q ss_pred CCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCC---
Q 022111 159 PAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDG--- 235 (302)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~--- 235 (302)
|++ +.|++++.++.|++||+.++. ....+.+|...|.+++|+||+ ++|++++.++
T Consensus 388 pDG--------------~~la~~~~~~~v~~~d~~tg~----~~~~~~~~~~~v~~~~~SpDG----~~la~~~~~~~~~ 445 (1045)
T 1k32_A 388 RNG--------------KFAVVANDRFEIMTVDLETGK----PTVIERSREAMITDFTISDNS----RFIAYGFPLKHGE 445 (1045)
T ss_dssp TTS--------------SEEEEEETTSEEEEEETTTCC----EEEEEECSSSCCCCEEECTTS----CEEEEEEEECSST
T ss_pred CCC--------------CEEEEECCCCeEEEEECCCCc----eEEeccCCCCCccceEECCCC----CeEEEEecCcccc
Confidence 974 789999999999999998763 223344788899999999996 7788887654
Q ss_pred -------eEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeec
Q 022111 236 -------TVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEA 287 (302)
Q Consensus 236 -------~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~ 287 (302)
.|++||+.... ...+..+...+.+++|+|||++|+.++.+ ...+|+..
T Consensus 446 ~~~~~~~~i~l~d~~~g~----~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 446 TDGYVMQAIHVYDMEGRK----IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp TCSCCEEEEEEEETTTTE----EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSS
T ss_pred ccCCCCCeEEEEECCCCc----EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchh
Confidence 89999987532 22345566678899999999999888766 67778753
No 146
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.83 E-value=5.1e-19 Score=168.59 Aligned_cols=238 Identities=12% Similarity=0.131 Sum_probs=160.8
Q ss_pred cceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCC---
Q 022111 12 DTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGN--- 88 (302)
Q Consensus 12 ~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~--- 88 (302)
..|.+++|+|| +.++.+ .|+++++||+.++ + ...+..|...+.+++|+|+ |++|+++ .|+.|.+||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~--~-~~~l~~~~~~~~~~~~Spd--G~~la~~-~~~~i~v~~~~~~~~ 153 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLAR--K-VTYLFDTNEETASLDFSPV--GDRVAYV-RNHNLYIARGGKLGE 153 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTT--E-EEEEECCTTCCTTCEECTT--SSEEEEE-ETTEEEEEECBCTTS
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCC--c-eEEccCCcccccCCcCCCC--CCEEEEE-ECCeEEEEecCcccc
Confidence 56999999999 666655 4699999998653 2 2344556777889999874 8888884 789999999976
Q ss_pred --CCceeEEEEecCCCCC--------------eeEEEecCCCCCcEEEEEe-----------------------------
Q 022111 89 --QNDWTQAHTFNDHKSS--------------VNSIAWAPHELGLSLACGS----------------------------- 123 (302)
Q Consensus 89 --~~~~~~~~~~~~h~~~--------------i~~l~~~pd~~~~~l~sg~----------------------------- 123 (302)
+.. ......+... +.+++|+|| |..|++++
T Consensus 154 ~~g~~---~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpD--g~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~ 228 (706)
T 2z3z_A 154 GMSRA---IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPK--GSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMA 228 (706)
T ss_dssp CCCCC---EESCSCCBTTEEESSCCGGGCTTCCCSEEECTT--SSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBT
T ss_pred cCCCc---EEeccCCCCCeEcccchhhhhcCCCceEEECCC--CCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCC
Confidence 432 2222222222 589999999 67888887
Q ss_pred ----cCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCC-----cEEEEEEec
Q 022111 124 ----SDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN-----TVKVWKMYN 194 (302)
Q Consensus 124 ----~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~-----~v~iwd~~~ 194 (302)
.+..|.+||+.... .........|...+.++.|+|++ +.|++++.++ .|++||+.+
T Consensus 229 g~~~~~~~l~~~d~~~~~-~~~~~~~~~~~~~~~~~~~spdg--------------~~l~~~~~~~~~~~~~v~~~d~~~ 293 (706)
T 2z3z_A 229 GTPSHHVTVGIYHLATGK-TVYLQTGEPKEKFLTNLSWSPDE--------------NILYVAEVNRAQNECKVNAYDAET 293 (706)
T ss_dssp TSCCCEEEEEEEETTTTE-EEECCCCSCTTCEEEEEEECTTS--------------SEEEEEEECTTSCEEEEEEEETTT
T ss_pred CCCCCeeEEEEEECCCCc-eEeeccCCCCceeEeeEEEECCC--------------CEEEEEEeCCCCCeeEEEEEECCC
Confidence 34678889886432 11111112455678999999974 6788877765 899999877
Q ss_pred C-ccccccccccccCCC---ceeEEEeeC--CCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEE-EEEc
Q 022111 195 G-IWKMDCFPALQMHSD---WVRSVAWAP--NLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWS-VSWS 267 (302)
Q Consensus 195 ~-~~~~~~~~~~~~h~~---~v~~v~~~p--~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~-~~~s 267 (302)
+ ... . +.. ..+.. .+.+++|+| |+ +++++++.|+.++||+++..... ...+..+...+.+ ++|+
T Consensus 294 g~~~~-~-~~~-~~~~~~~~~~~~~~~sp~~dg----~~l~~~~~~g~~~l~~~~~~~~~--~~~l~~~~~~v~~~~~~s 364 (706)
T 2z3z_A 294 GRFVR-T-LFV-ETDKHYVEPLHPLTFLPGSNN----QFIWQSRRDGWNHLYLYDTTGRL--IRQVTKGEWEVTNFAGFD 364 (706)
T ss_dssp CCEEE-E-EEE-EECSSCCCCCSCCEECTTCSS----EEEEEECTTSSCEEEEEETTSCE--EEECCCSSSCEEEEEEEC
T ss_pred Cceee-E-EEE-ccCCCeECccCCceeecCCCC----EEEEEEccCCccEEEEEECCCCE--EEecCCCCeEEEeeeEEc
Confidence 6 211 1 111 12222 347889999 85 68999999999999998733221 1233445556776 7999
Q ss_pred cCCCEEEEecCC-c---eEEeee
Q 022111 268 LTGNLLAVADAN-N---VTLWKE 286 (302)
Q Consensus 268 pdg~~la~~~~d-~---i~~w~~ 286 (302)
|||+.|++++.+ + ++||..
T Consensus 365 pdg~~l~~~~~~~~~~~~~l~~~ 387 (706)
T 2z3z_A 365 PKGTRLYFESTEASPLERHFYCI 387 (706)
T ss_dssp TTSSEEEEEESSSCTTCBEEEEE
T ss_pred CCCCEEEEEecCCCCceEEEEEE
Confidence 999988766443 2 566654
No 147
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.83 E-value=8e-18 Score=148.10 Aligned_cols=257 Identities=10% Similarity=0.081 Sum_probs=159.5
Q ss_pred cceeEEEEccCCCEEEEeeCCCcEEEEeec-CCCceEEEEecCcccCeEEEEeeCCCCCC--EEEEEe------------
Q 022111 12 DTVHDVAMDFYGKRLATASSDSSIKIIGLS-NSASQHLATLKGHRGPVWQVAWAHPKFGS--ILASCS------------ 76 (302)
Q Consensus 12 ~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~-~~~~~~~~~~~~h~~~v~~v~~~~~~~~~--~l~s~s------------ 76 (302)
..+..++|+|++++|++++.+ .|++|++. .+....+.....+ +...+++|+++ |+ +++++.
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~spd--g~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRANDADTN--TRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTTSC--CEEEEEEECSSTTCCEEEEEES
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEEECCC--CCEEEEEEecCCcceeccceee
Confidence 357789999999999999888 99999986 4322112222111 23455788764 77 355553
Q ss_pred -CCCeEEEEEcCCCCce-eEEEEec-CCCCCeeEEEecCCCCCcEEEEEe-cCCcEEEEEecCCCCeee-eeecc-cCCC
Q 022111 77 -YDGQVIIWKEGNQNDW-TQAHTFN-DHKSSVNSIAWAPHELGLSLACGS-SDGNISVFTATADGGWDT-TRIDQ-AHPV 150 (302)
Q Consensus 77 -~D~~i~iwd~~~~~~~-~~~~~~~-~h~~~i~~l~~~pd~~~~~l~sg~-~d~~v~~~~~~~~~~~~~-~~~~~-~h~~ 150 (302)
.++++.+|++...... ..+..+. .+...+.+++|+|| |++|++++ .++.|++|++...+.... ..+.. .|..
T Consensus 116 ~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spd--G~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~ 193 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPT--ETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGD 193 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTT--SSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTC
T ss_pred cCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCC--CCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCC
Confidence 6899999998642221 1122221 24567899999998 66677665 467999999873222221 12211 1345
Q ss_pred CeEEEEeCCCCCCCceeecccCCCceeEEEee-CCCcEEEEEEec--Ccccc--cccccc----ccCCC------ceeEE
Q 022111 151 GVTSVSWAPAMAPGALVGLGLLDPVQKLASCG-CDNTVKVWKMYN--GIWKM--DCFPAL----QMHSD------WVRSV 215 (302)
Q Consensus 151 ~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-~D~~v~iwd~~~--~~~~~--~~~~~~----~~h~~------~v~~v 215 (302)
.+..++|+|++ ++|++++ .++.|.+|++.. +.... ..+..+ .+|.. .+.++
T Consensus 194 ~p~~~~~spdg--------------~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i 259 (365)
T 1jof_A 194 HPRWVAMHPTG--------------NYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADV 259 (365)
T ss_dssp CEEEEEECTTS--------------SEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEE
T ss_pred CCCEeEECCCC--------------CEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccE
Confidence 67889999864 5666655 478999998863 32110 111112 23343 68899
Q ss_pred E-eeCCCCCCccEEEEEec-CC-----eEEEEEeccCCccee-eeeeccCCCcEEEEEEcc---CCCEEEEecCC--ceE
Q 022111 216 A-WAPNLGLPKSTIASASQ-DG-----TVVIWTCAKEGEQWE-GRVLKDFKTPVWSVSWSL---TGNLLAVADAN--NVT 282 (302)
Q Consensus 216 ~-~~p~~~~~~~~l~s~s~-D~-----~i~iwd~~~~~~~~~-~~~~~~~~~~v~~~~~sp---dg~~la~~~~d--~i~ 282 (302)
+ |+||+ ++|++++. +. +|++|++...+.... ......+...+..++|+| ||++|++++.+ .|.
T Consensus 260 ~~~spdG----~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~ 335 (365)
T 1jof_A 260 CALTFSG----KYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLE 335 (365)
T ss_dssp EEECTTS----SEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEE
T ss_pred EEECCCC----CEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEE
Confidence 9 99996 56655543 33 899999963222111 001222334466789999 89999999764 699
Q ss_pred EeeecCCceEE
Q 022111 283 LWKEAVDGEWQ 293 (302)
Q Consensus 283 ~w~~~~~~~~~ 293 (302)
+|+.... ...
T Consensus 336 v~~~~~~-~l~ 345 (365)
T 1jof_A 336 IYRWKDE-FLH 345 (365)
T ss_dssp EEEEETT-EEE
T ss_pred EEEEchh-hCc
Confidence 9998644 443
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.83 E-value=9.4e-19 Score=167.02 Aligned_cols=252 Identities=10% Similarity=0.101 Sum_probs=158.4
Q ss_pred cccccc---ceeEEEEccCCCEEEEeeCC---------CcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEE
Q 022111 7 ETGHED---TVHDVAMDFYGKRLATASSD---------SSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILAS 74 (302)
Q Consensus 7 ~~~h~~---~v~~~~~s~~~~~l~s~~~d---------~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s 74 (302)
..+|.. .|.+++|||||++||+++.+ +.+++||+..+....+....+|...+..++|+|+ |++||+
T Consensus 53 ~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPd--G~~la~ 130 (723)
T 1xfd_A 53 IEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPK--GQQLIF 130 (723)
T ss_dssp ECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSS--TTCEEE
T ss_pred eccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCC--CCEEEE
Confidence 344544 48999999999999999875 6788999876543333333456666889999875 889998
Q ss_pred EeCCCeEEEEEcCCCCceeEEEEecCCCC------------------CeeEEEecCCCCCcEEEEEecCC----------
Q 022111 75 CSYDGQVIIWKEGNQNDWTQAHTFNDHKS------------------SVNSIAWAPHELGLSLACGSSDG---------- 126 (302)
Q Consensus 75 ~s~D~~i~iwd~~~~~~~~~~~~~~~h~~------------------~i~~l~~~pd~~~~~l~sg~~d~---------- 126 (302)
++. +.|.+||+.++.. ......+.. .+.+++|+|| |..|++++.|+
T Consensus 131 ~~~-~~i~~~~~~~g~~---~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpD--g~~la~~~~~~~~~~~~~~~~ 204 (723)
T 1xfd_A 131 IFE-NNIYYCAHVGKQA---IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPD--GTRLAYAAINDSRVPIMELPT 204 (723)
T ss_dssp EET-TEEEEESSSSSCC---EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTT--SSEEEEEEEECTTSCEEEECC
T ss_pred EEC-CeEEEEECCCCce---EEEecCCCCCceECcccceeEEEEeccCcceEEECCC--CCEEEEEEECCCccceEEeec
Confidence 886 7999999876532 222223332 2378999999 67888887553
Q ss_pred ------------------------cEEEEEecCCCCeeeeeecc-----cCCCCeEEEEeCCCCCCCceeecccCCCcee
Q 022111 127 ------------------------NISVFTATADGGWDTTRIDQ-----AHPVGVTSVSWAPAMAPGALVGLGLLDPVQK 177 (302)
Q Consensus 127 ------------------------~v~~~~~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (302)
.|.+||+...... ..+.. .+...+..+.|+|++ +.
T Consensus 205 ~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~--~~l~~~~~~~~~~~~~~~~~~SpDg--------------~~ 268 (723)
T 1xfd_A 205 YTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHD--LEMMPPDDPRMREYYITMVKWATST--------------KV 268 (723)
T ss_dssp CSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCC--EECCCCCCGGGSSEEEEEEEESSSS--------------EE
T ss_pred cCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCcee--EEeeCCccCCCccceeEEEEEeCCC--------------eE
Confidence 6788887643211 12211 124567889999864 66
Q ss_pred EEEeeC----CCcEEEEEEecCccccccccccc-cCCCcee----EEEeeCCCCCCccEEEE--EecCC----e--EEEE
Q 022111 178 LASCGC----DNTVKVWKMYNGIWKMDCFPALQ-MHSDWVR----SVAWAPNLGLPKSTIAS--ASQDG----T--VVIW 240 (302)
Q Consensus 178 l~s~~~----D~~v~iwd~~~~~~~~~~~~~~~-~h~~~v~----~v~~~p~~~~~~~~l~s--~s~D~----~--i~iw 240 (302)
|++.+. +..|++||+.++.. ...+. .|..++. +++|+||+ +.|+. +..|+ . |.+|
T Consensus 269 l~~~~~~~~~~~~i~~~d~~~g~~----~~~~~~~~~~~~~~~~~~~~~spdg----~~l~~~~~~~~~~~~~~~~l~~~ 340 (723)
T 1xfd_A 269 AVTWLNRAQNVSILTLCDATTGVC----TKKHEDESEAWLHRQNEEPVFSKDG----RKFFFIRAIPQGGRGKFYHITVS 340 (723)
T ss_dssp EEEEEETTSCEEEEEEEETTTCCE----EEEEEEECSSCCCCCCCCCEECTTS----CSEEEEEEECCSSSSCEEEEEEE
T ss_pred EEEEEcCCCCeEEEEEEeCCCCcc----eEEEEeccCCEEeccCCCceEcCCC----CeEEEEEecccCCCcceeEEEEE
Confidence 665543 35799999877631 12222 2445554 78999996 44543 55677 4 5555
Q ss_pred EeccCCcceeeeeeccCCCcEEE-EEEccCCCEEEEecC----CceEEeeecCCc
Q 022111 241 TCAKEGEQWEGRVLKDFKTPVWS-VSWSLTGNLLAVADA----NNVTLWKEAVDG 290 (302)
Q Consensus 241 d~~~~~~~~~~~~~~~~~~~v~~-~~~spdg~~la~~~~----d~i~~w~~~~~~ 290 (302)
|+...........+......+.. ++|||||+.|+..+. ..++||+...++
T Consensus 341 d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~ 395 (723)
T 1xfd_A 341 SSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVG 395 (723)
T ss_dssp CSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSST
T ss_pred eccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCC
Confidence 52122110001122222334544 699999999876543 248999986544
No 149
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.83 E-value=8.7e-18 Score=145.12 Aligned_cols=245 Identities=9% Similarity=0.040 Sum_probs=155.4
Q ss_pred EEEccCCC-EEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEe-CCCeEEEEEcCCCCceeE
Q 022111 17 VAMDFYGK-RLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCS-YDGQVIIWKEGNQNDWTQ 94 (302)
Q Consensus 17 ~~~s~~~~-~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s-~D~~i~iwd~~~~~~~~~ 94 (302)
+.|+.+++ .+++++.+++|++||..... ....+..+...+ .++|+++ +++|++++ .++.|.+||+.+... .
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~-~~~~s~d--g~~l~~~~~~~~~i~~~d~~~~~~--~ 75 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLE--ILNQITLGYDFV-DTAITSD--CSNVVVTSDFCQTLVQIETQLEPP--K 75 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCC--EEEEEECCCCEE-EEEECSS--SCEEEEEESTTCEEEEEECSSSSC--E
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccc--eeeeEEccCCcc-eEEEcCC--CCEEEEEeCCCCeEEEEECCCCce--e
Confidence 34666555 47788889999999986543 334444445556 8999864 67555555 489999999977542 1
Q ss_pred EEEecCCCCCeeEEEecCCCCCcEEEEEecCC---cEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeeccc
Q 022111 95 AHTFNDHKSSVNSIAWAPHELGLSLACGSSDG---NISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGL 171 (302)
Q Consensus 95 ~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~---~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~ 171 (302)
...+..+..+..+++|+|+ +.+++++..++ .|.+||...... ...+ .+......++|+|++
T Consensus 76 ~~~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~~~~i~v~d~~~~~~--~~~~--~~~~~~~~~~~spdg---------- 139 (331)
T 3u4y_A 76 VVAIQEGQSSMADVDITPD--DQFAVTVTGLNHPFNMQSYSFLKNKF--ISTI--PIPYDAVGIAISPNG---------- 139 (331)
T ss_dssp EEEEEECSSCCCCEEECTT--SSEEEECCCSSSSCEEEEEETTTTEE--EEEE--ECCTTEEEEEECTTS----------
T ss_pred EEecccCCCCccceEECCC--CCEEEEecCCCCcccEEEEECCCCCe--EEEE--ECCCCccceEECCCC----------
Confidence 4455556666666999998 66777555553 899999864422 1222 223446889999874
Q ss_pred CCCceeEEEeeCCCc-EEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCccee
Q 022111 172 LDPVQKLASCGCDNT-VKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWE 250 (302)
Q Consensus 172 ~~~~~~l~s~~~D~~-v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~ 250 (302)
...++++..++. |.+|++...............+.....+++|+|++ ...++++..++.|++||+........
T Consensus 140 ---~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg---~~l~v~~~~~~~v~v~d~~~~~~~~~ 213 (331)
T 3u4y_A 140 ---NGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDG---NFAFVANLIGNSIGILETQNPENITL 213 (331)
T ss_dssp ---SCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTS---SEEEEEETTTTEEEEEECSSTTSCEE
T ss_pred ---CEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCC---CEEEEEeCCCCeEEEEECCCCcccce
Confidence 134555666688 99999875321111101111234457899999996 13456666799999999875432000
Q ss_pred eeeeccCCCcEEEEEEccCCCEEEEecC-C-ceEEeeecCCceE
Q 022111 251 GRVLKDFKTPVWSVSWSLTGNLLAVADA-N-NVTLWKEAVDGEW 292 (302)
Q Consensus 251 ~~~~~~~~~~v~~~~~spdg~~la~~~~-d-~i~~w~~~~~~~~ 292 (302)
.... .....+..++|+|||++|+++.. + .|.+|+... ++.
T Consensus 214 ~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~-~~~ 255 (331)
T 3u4y_A 214 LNAV-GTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS-GTL 255 (331)
T ss_dssp EEEE-ECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTT-TEE
T ss_pred eeec-cCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCC-Cce
Confidence 1111 22356778999999998877654 3 699999754 443
No 150
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.82 E-value=3.5e-17 Score=142.57 Aligned_cols=240 Identities=13% Similarity=0.150 Sum_probs=152.2
Q ss_pred CCCcEEEEeecCCCceEE-EEecCcccCeEEEEeeCCCCCCEEEEEeC---CCeEEEEEcCCCCceeEEEEecCCCCCee
Q 022111 31 SDSSIKIIGLSNSASQHL-ATLKGHRGPVWQVAWAHPKFGSILASCSY---DGQVIIWKEGNQNDWTQAHTFNDHKSSVN 106 (302)
Q Consensus 31 ~d~~v~lw~~~~~~~~~~-~~~~~h~~~v~~v~~~~~~~~~~l~s~s~---D~~i~iwd~~~~~~~~~~~~~~~h~~~i~ 106 (302)
.++.|++|.++...++.. .....+......++|+++ |+ |++++. ++.|.+|++..+ ....+..+..+...+.
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spd--g~-l~~~~~~~~~~~v~~~~~~~g-~~~~~~~~~~~~~~p~ 89 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAK--DC-LYSVDKEDDEGGIAAWQIDGQ-TAHKLNTVVAPGTPPA 89 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTT--CE-EEEEEEETTEEEEEEEEEETT-EEEEEEEEEEESCCCS
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccC--Ce-EEEEEecCCCceEEEEEecCC-cEEEeeeeecCCCCCE
Confidence 467799998875443321 123345566778999874 67 444443 689999999553 2334444445677889
Q ss_pred EEEecCCCCCcEEEEEe-cCCcEEEEEecCCCCeee-eeecc-c-------CCCCeEEEEeCCCCCCCceeecccCCCce
Q 022111 107 SIAWAPHELGLSLACGS-SDGNISVFTATADGGWDT-TRIDQ-A-------HPVGVTSVSWAPAMAPGALVGLGLLDPVQ 176 (302)
Q Consensus 107 ~l~~~pd~~~~~l~sg~-~d~~v~~~~~~~~~~~~~-~~~~~-~-------h~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 176 (302)
.++|+|| +.+|++++ .++.+.+|++...+.... ..+.. + +...+.+++|+|++ +
T Consensus 90 ~~a~spd--g~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg--------------~ 153 (347)
T 3hfq_A 90 YVAVDEA--RQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDN--------------R 153 (347)
T ss_dssp EEEEETT--TTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTS--------------C
T ss_pred EEEECCC--CCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCC--------------c
Confidence 9999998 66777777 778999999965443322 11110 0 11236778888864 5
Q ss_pred eEEEeeCCCcEEEEEEe-cCccccccccccccC-CCceeEEEeeCCCCCCcc-EEEEEecCCeEEEEEeccCCccee-ee
Q 022111 177 KLASCGCDNTVKVWKMY-NGIWKMDCFPALQMH-SDWVRSVAWAPNLGLPKS-TIASASQDGTVVIWTCAKEGEQWE-GR 252 (302)
Q Consensus 177 ~l~s~~~D~~v~iwd~~-~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~~~-~l~s~s~D~~i~iwd~~~~~~~~~-~~ 252 (302)
.+++...++.|++||+. ++.. .....+..+ ...+..++|+||+ + .+++...++.|++|+++....... ..
T Consensus 154 l~v~~~~~~~v~~~~~~~~g~~--~~~~~~~~~~g~~p~~~~~spdg----~~l~v~~~~~~~v~v~~~~~~~g~~~~~~ 227 (347)
T 3hfq_A 154 LAVIDLGSDKVYVYNVSDAGQL--SEQSVLTMEAGFGPRHLVFSPDG----QYAFLAGELSSQIASLKYDTQTGAFTQLG 227 (347)
T ss_dssp EEEEETTTTEEEEEEECTTSCE--EEEEEEECCTTCCEEEEEECTTS----SEEEEEETTTTEEEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCEEEEEEECCCCcE--EEeeeEEcCCCCCCceEEECCCC----CEEEEEeCCCCEEEEEEecCCCCceEEee
Confidence 67777778899999998 3321 111122222 2357889999996 4 455567789999999875221111 11
Q ss_pred eeccCC------CcEEEEEEccCCCEEEEec-CC-ceEEeeecCCceEEEee
Q 022111 253 VLKDFK------TPVWSVSWSLTGNLLAVAD-AN-NVTLWKEAVDGEWQQVS 296 (302)
Q Consensus 253 ~~~~~~------~~v~~~~~spdg~~la~~~-~d-~i~~w~~~~~~~~~~~~ 296 (302)
...... ..+..++|+|||++|+++. .+ .|.+|+...+|.+....
T Consensus 228 ~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~ 279 (347)
T 3hfq_A 228 IVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQ 279 (347)
T ss_dssp EEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEE
T ss_pred eeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeE
Confidence 111111 3488999999999885543 34 79999987666554443
No 151
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.82 E-value=4.9e-18 Score=147.35 Aligned_cols=243 Identities=9% Similarity=0.053 Sum_probs=154.8
Q ss_pred EEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcc-cCeEEEEeeCCCCCCE-EEEEeCCCeEEEEEcCCCCcee
Q 022111 16 DVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHR-GPVWQVAWAHPKFGSI-LASCSYDGQVIIWKEGNQNDWT 93 (302)
Q Consensus 16 ~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~-~~v~~v~~~~~~~~~~-l~s~s~D~~i~iwd~~~~~~~~ 93 (302)
.++++++++++++++.+++|++||..+. +.+..+..+. ..+..++|+++ +++ ++++..++.|.+||+.++.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~~s~d--g~~~~v~~~~~~~i~~~d~~t~~--- 76 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASD--TVYKSCVMPDKFGPGTAMMAPD--NRTAYVLNNHYGDIYGIDLDTCK--- 76 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTT--EEEEEEECSSCCSSCEEEECTT--SSEEEEEETTTTEEEEEETTTTE---
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCC--cEEEEEecCCCCCCceeEECCC--CCEEEEEeCCCCcEEEEeCCCCc---
Confidence 4567888899999999999999998653 4455554333 24678999764 664 5566678999999987653
Q ss_pred EEEEecCCC------CCeeEEEecCCCCCcEEEEEecC------------CcEEEEEecCCCCeeeeeecccCCCCeEEE
Q 022111 94 QAHTFNDHK------SSVNSIAWAPHELGLSLACGSSD------------GNISVFTATADGGWDTTRIDQAHPVGVTSV 155 (302)
Q Consensus 94 ~~~~~~~h~------~~i~~l~~~pd~~~~~l~sg~~d------------~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~ 155 (302)
....+.... ..+..++|+|| +.+|++++.+ +.|.+||+.+.......... .+...+.++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~spd--g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~ 153 (349)
T 1jmx_B 77 NTFHANLSSVPGEVGRSMYSFAISPD--GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF-PMPRQVYLM 153 (349)
T ss_dssp EEEEEESCCSTTEEEECSSCEEECTT--SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE-ECCSSCCCE
T ss_pred EEEEEEcccccccccccccceEECCC--CCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec-cCCCcccce
Confidence 333333222 23789999998 6678887765 89999998752211111111 233457778
Q ss_pred EeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccc-cc------------------------------
Q 022111 156 SWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCF-PA------------------------------ 204 (302)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~-~~------------------------------ 204 (302)
+|+|++ + ++.++. .|++||+.++....... ..
T Consensus 154 ~~s~dg--------------~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (349)
T 1jmx_B 154 RAADDG--------------S-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTI 216 (349)
T ss_dssp EECTTS--------------C-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEE
T ss_pred eECCCC--------------c-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeee
Confidence 888864 4 444433 38889876543110000 00
Q ss_pred ---------------------------------cccCCCceeEEEeeC-CCCCCccEEEEEecCCeEEEEEeccCCccee
Q 022111 205 ---------------------------------LQMHSDWVRSVAWAP-NLGLPKSTIASASQDGTVVIWTCAKEGEQWE 250 (302)
Q Consensus 205 ---------------------------------~~~h~~~v~~v~~~p-~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~ 250 (302)
+..+...+.+++|+| ++ +.++++ ++.|.+||+.+... .
T Consensus 217 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg----~~l~~~--~~~v~~~d~~~~~~--~ 288 (349)
T 1jmx_B 217 ARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP----NQIYGV--LNRLAKYDLKQRKL--I 288 (349)
T ss_dssp EEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCT----TEEEEE--ESEEEEEETTTTEE--E
T ss_pred eecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCC----CEEEEE--cCeEEEEECccCeE--E
Confidence 000112456778888 75 567666 88999999875321 1
Q ss_pred eeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCceEEEe
Q 022111 251 GRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQV 295 (302)
Q Consensus 251 ~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~~~~~ 295 (302)
..+ .....+.+++|+|||++|++++.+ .|.+|+..........
T Consensus 289 ~~~--~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 289 KAA--NLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNI 332 (349)
T ss_dssp EEE--ECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEE
T ss_pred EEE--cCCCCccceEECCCCCEEEEecCCCeEEEEeccccceeeee
Confidence 111 123457789999999988887666 7999998654444443
No 152
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.82 E-value=2.4e-17 Score=143.31 Aligned_cols=245 Identities=8% Similarity=-0.016 Sum_probs=159.7
Q ss_pred cccceeEEEEccCCCEEEEeeC-------CCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCC-EEEEEeCCCeE
Q 022111 10 HEDTVHDVAMDFYGKRLATASS-------DSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGS-ILASCSYDGQV 81 (302)
Q Consensus 10 h~~~v~~~~~s~~~~~l~s~~~-------d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~-~l~s~s~D~~i 81 (302)
....+..++|+++++++++++. ++.|.+||.... +.+..+.. ...+..++|+++ ++ ++++...++.|
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~--~~~~~~~~-~~~~~~~~~s~d--g~~l~v~~~~~~~v 113 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL--EVTQAIHN-DLKPFGATINNT--TQTLWFGNTVNSAV 113 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC--CEEEEEEE-SSCCCSEEEETT--TTEEEEEETTTTEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC--eEEEEEec-CCCcceEEECCC--CCEEEEEecCCCEE
Confidence 3456788999999998888774 568999998653 33444432 334677889864 66 55666678999
Q ss_pred EEEEcCCCCceeEEEEecCCCC---------CeeEEEecCCCCCcEEEEEe--cCCcEEEEEecCCCCeeeeeecccCCC
Q 022111 82 IIWKEGNQNDWTQAHTFNDHKS---------SVNSIAWAPHELGLSLACGS--SDGNISVFTATADGGWDTTRIDQAHPV 150 (302)
Q Consensus 82 ~iwd~~~~~~~~~~~~~~~h~~---------~i~~l~~~pd~~~~~l~sg~--~d~~v~~~~~~~~~~~~~~~~~~~h~~ 150 (302)
.+||..++. ....+..+.. .+.+++|+|+ +..++.++ .++.|.+||..+... ...+. .+..
T Consensus 114 ~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~~~i~~~d~~~~~~--~~~~~-~~~~ 185 (353)
T 3vgz_A 114 TAIDAKTGE---VKGRLVLDDRKRTEEVRPLQPRELVADDA--TNTVYISGIGKESVIWVVDGGNIKL--KTAIQ-NTGK 185 (353)
T ss_dssp EEEETTTCC---EEEEEESCCCCCCSSCCCCEEEEEEEETT--TTEEEEEEESSSCEEEEEETTTTEE--EEEEC-CCCT
T ss_pred EEEeCCCCe---eEEEEecCCCccccccCCCCCceEEECCC--CCEEEEEecCCCceEEEEcCCCCce--EEEec-CCCC
Confidence 999997754 3344443332 2688999998 44555554 478899999864321 12222 2333
Q ss_pred CeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEE
Q 022111 151 GVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIAS 230 (302)
Q Consensus 151 ~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s 230 (302)
.+..+.|+|++ +.|+.++.++.|.+||+.++...........++...+.+++|+|++ ...+++
T Consensus 186 ~~~~~~~s~dg--------------~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg---~~l~~~ 248 (353)
T 3vgz_A 186 MSTGLALDSEG--------------KRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTAR---QRAFIT 248 (353)
T ss_dssp TCCCCEEETTT--------------TEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTT---TEEEEE
T ss_pred ccceEEECCCC--------------CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCC---CEEEEE
Confidence 46677888763 6788888899999999877632111111112356678899999996 234445
Q ss_pred EecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecC-C-ceEEeeecCC
Q 022111 231 ASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADA-N-NVTLWKEAVD 289 (302)
Q Consensus 231 ~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~-d-~i~~w~~~~~ 289 (302)
...++.|.+||....... ..+.. .. ...++|+|+|+++.+++. + .|.+|+....
T Consensus 249 ~~~~~~v~~~d~~~~~~~--~~~~~--~~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 249 DSKAAEVLVVDTRNGNIL--AKVAA--PE-SLAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp ESSSSEEEEEETTTCCEE--EEEEC--SS-CCCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred eCCCCEEEEEECCCCcEE--EEEEc--CC-CceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 555699999998754321 11111 12 256999999997666653 4 7999997643
No 153
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.81 E-value=1e-17 Score=144.43 Aligned_cols=240 Identities=15% Similarity=0.150 Sum_probs=154.3
Q ss_pred ceeEEEEccCCCEE-EEeeCCCcEEEEeecCCCceEEEEec-C----cccCeEEEEeeCCCCCCEEEEEe----------
Q 022111 13 TVHDVAMDFYGKRL-ATASSDSSIKIIGLSNSASQHLATLK-G----HRGPVWQVAWAHPKFGSILASCS---------- 76 (302)
Q Consensus 13 ~v~~~~~s~~~~~l-~s~~~d~~v~lw~~~~~~~~~~~~~~-~----h~~~v~~v~~~~~~~~~~l~s~s---------- 76 (302)
.+..++|+|+++++ ++++.++.|.+||+.... .+..+. + |...+..++|+++ +++|++++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~~~~~~~ 110 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE--TLGRIDLSTPEERVKSLFGAALSPD--GKTLAIYESPVRLELTHF 110 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCC--EEEEEECCBTTEEEECTTCEEECTT--SSEEEEEEEEEEECSSCE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCC--eEeeEEcCCcccccccccceEECCC--CCEEEEEecccccccccc
Confidence 47789999999765 455567899999986543 333332 1 2335678999864 77887775
Q ss_pred --CCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccC-CCCeE
Q 022111 77 --YDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAH-PVGVT 153 (302)
Q Consensus 77 --~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h-~~~v~ 153 (302)
.++.|.+||+.+.. ....+.. ...+.+++|+|+ +.+|+++ ++.|.+||...... ...+...+ ...
T Consensus 111 ~~~~~~i~v~d~~~~~---~~~~~~~-~~~~~~~~~s~d--g~~l~~~--~~~i~~~d~~~~~~--~~~~~~~~~~~~-- 178 (337)
T 1pby_B 111 EVQPTRVALYDAETLS---RRKAFEA-PRQITMLAWARD--GSKLYGL--GRDLHVMDPEAGTL--VEDKPIQSWEAE-- 178 (337)
T ss_dssp EECCCEEEEEETTTTE---EEEEEEC-CSSCCCEEECTT--SSCEEEE--SSSEEEEETTTTEE--EEEECSTTTTTT--
T ss_pred cccCceEEEEECCCCc---EEEEEeC-CCCcceeEECCC--CCEEEEe--CCeEEEEECCCCcE--eeeeeccccCCC--
Confidence 57999999987642 3344443 456788999998 5566666 68999999864321 12222111 122
Q ss_pred EEEeCCCCCCCceeecccCCCceeEEEeeCCC-----------------------cEEEEEEecCccccccccccccCCC
Q 022111 154 SVSWAPAMAPGALVGLGLLDPVQKLASCGCDN-----------------------TVKVWKMYNGIWKMDCFPALQMHSD 210 (302)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~-----------------------~v~iwd~~~~~~~~~~~~~~~~h~~ 210 (302)
+.|+|++. ..++++..++ .|.+||+.++... ...+..+..
T Consensus 179 -~~~s~dg~-------------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~---~~~~~~~~~ 241 (337)
T 1pby_B 179 -TYAQPDVL-------------AVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA---MREVRIMDV 241 (337)
T ss_dssp -TBCCCBCC-------------CCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE---EEEEEECSS
T ss_pred -ceeCCCcc-------------EEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce---EeecCCCCC
Confidence 25566531 1111121222 4788998765321 223445667
Q ss_pred ceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCC
Q 022111 211 WVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVD 289 (302)
Q Consensus 211 ~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~ 289 (302)
.+.+++|+|++ ++++++ ++.|++||+..... ...+ .....+.+++|+|||++|++++.+ .|++|+....
T Consensus 242 ~~~~~~~s~dg----~~l~~~--~~~v~~~d~~~~~~--~~~~--~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 242 FYFSTAVNPAK----TRAFGA--YNVLESFDLEKNAS--IKRV--PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp CEEEEEECTTS----SEEEEE--ESEEEEEETTTTEE--EEEE--ECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTC
T ss_pred ceeeEEECCCC----CEEEEe--CCeEEEEECCCCcC--ccee--cCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCC
Confidence 78899999996 667766 79999999875321 1111 223467899999999988888666 7999998655
Q ss_pred ceEEEe
Q 022111 290 GEWQQV 295 (302)
Q Consensus 290 ~~~~~~ 295 (302)
..-...
T Consensus 312 ~~~~~~ 317 (337)
T 1pby_B 312 EKKGQV 317 (337)
T ss_dssp CEEEEE
T ss_pred cEEEEE
Confidence 444333
No 154
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.81 E-value=2.9e-17 Score=142.78 Aligned_cols=232 Identities=13% Similarity=0.106 Sum_probs=154.2
Q ss_pred ceeEEEEccCCCEEE-EeeCCCcEEEEeecCCCceEEEEecCcccC---------eEEEEeeCCCCCCEEEEEe--CCCe
Q 022111 13 TVHDVAMDFYGKRLA-TASSDSSIKIIGLSNSASQHLATLKGHRGP---------VWQVAWAHPKFGSILASCS--YDGQ 80 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~-s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~---------v~~v~~~~~~~~~~l~s~s--~D~~ 80 (302)
.+..++|++++++++ +...++.|.+||.... +.+..+..+... +.+++|+++ +++++.++ .++.
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~~~ 165 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTG--EVKGRLVLDDRKRTEEVRPLQPRELVADDA--TNTVYISGIGKESV 165 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTTC--CEEEEEESCCCCCCSSCCCCEEEEEEEETT--TTEEEEEEESSSCE
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCCC--eeEEEEecCCCccccccCCCCCceEEECCC--CCEEEEEecCCCce
Confidence 466789999998555 4455799999998654 334444443322 678999864 66665554 4889
Q ss_pred EEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeee-cccCCCCeEEEEeCC
Q 022111 81 VIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRI-DQAHPVGVTSVSWAP 159 (302)
Q Consensus 81 i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~ 159 (302)
|.+||.++. .....+..+...+.+++|+|+ +..+++++.++.+.+||..+......... ..++...+..++|+|
T Consensus 166 i~~~d~~~~---~~~~~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 240 (353)
T 3vgz_A 166 IWVVDGGNI---KLKTAIQNTGKMSTGLALDSE--GKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT 240 (353)
T ss_dssp EEEEETTTT---EEEEEECCCCTTCCCCEEETT--TTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEET
T ss_pred EEEEcCCCC---ceEEEecCCCCccceEEECCC--CCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECC
Confidence 999998765 345556545666889999998 66888888999999999865422221111 112344567788988
Q ss_pred CCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEE
Q 022111 160 AMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVI 239 (302)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~i 239 (302)
++ ...++++..++.|.+||+.++.. ...+.... ..+++|+|++ ...+++...++.|.+
T Consensus 241 dg-------------~~l~~~~~~~~~v~~~d~~~~~~----~~~~~~~~--~~~~~~s~dg---~~l~v~~~~~~~v~~ 298 (353)
T 3vgz_A 241 AR-------------QRAFITDSKAAEVLVVDTRNGNI----LAKVAAPE--SLAVLFNPAR---NEAYVTHRQAGKVSV 298 (353)
T ss_dssp TT-------------TEEEEEESSSSEEEEEETTTCCE----EEEEECSS--CCCEEEETTT---TEEEEEETTTTEEEE
T ss_pred CC-------------CEEEEEeCCCCEEEEEECCCCcE----EEEEEcCC--CceEEECCCC---CEEEEEECCCCeEEE
Confidence 64 23455556679999999876532 22222222 2569999996 235566667999999
Q ss_pred EEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC
Q 022111 240 WTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN 279 (302)
Q Consensus 240 wd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d 279 (302)
||..+... ...+ .....+.+++|+|||++|.++..+
T Consensus 299 ~d~~~~~~--~~~~--~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 299 IDAKSYKV--VKTF--DTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EETTTTEE--EEEE--ECCSEEEEEEECTTSCEEEEEEEC
T ss_pred EECCCCeE--EEEE--ecCCCCCeEEEcCCCCEEEEEEcc
Confidence 99875321 1111 223468999999999977666544
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.81 E-value=9.4e-18 Score=166.73 Aligned_cols=244 Identities=7% Similarity=-0.009 Sum_probs=174.0
Q ss_pred cccccc-ceeEEEEccCCCEEEEeeCCCcEE-EEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEE
Q 022111 7 ETGHED-TVHDVAMDFYGKRLATASSDSSIK-IIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIW 84 (302)
Q Consensus 7 ~~~h~~-~v~~~~~s~~~~~l~s~~~d~~v~-lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iw 84 (302)
...|.. .+..++|+ ||+.|+.++.+..+. +|+..... ...+.+|...+..++|+|+ |++|++++.++.+++|
T Consensus 332 ~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~---~~~l~~~~~~~~~~~~SpD--G~~la~~~~~~~v~~~ 405 (1045)
T 1k32_A 332 VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK---AEKFEENLGNVFAMGVDRN--GKFAVVANDRFEIMTV 405 (1045)
T ss_dssp CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC---EEECCCCCCSEEEEEECTT--SSEEEEEETTSEEEEE
T ss_pred ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC---ceEecCCccceeeeEECCC--CCEEEEECCCCeEEEE
Confidence 345666 88999999 999999999887777 78875432 2344578888999999874 8999999999999999
Q ss_pred EcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCC----------cEEEEEecCCCCeeeeeecccCCCCeEE
Q 022111 85 KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDG----------NISVFTATADGGWDTTRIDQAHPVGVTS 154 (302)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~----------~v~~~~~~~~~~~~~~~~~~~h~~~v~~ 154 (302)
|+.++. ....+..|...+.+++|+|| |.+|++++.++ .|++||+.... ...+. .|...+..
T Consensus 406 d~~tg~---~~~~~~~~~~~v~~~~~SpD--G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~---~~~l~-~~~~~~~~ 476 (1045)
T 1k32_A 406 DLETGK---PTVIERSREAMITDFTISDN--SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK---IFAAT-TENSHDYA 476 (1045)
T ss_dssp ETTTCC---EEEEEECSSSCCCCEEECTT--SCEEEEEEEECSSTTCSCCEEEEEEEETTTTE---EEECS-CSSSBEEE
T ss_pred ECCCCc---eEEeccCCCCCccceEECCC--CCeEEEEecCccccccCCCCCeEEEEECCCCc---EEEee-CCCcccCC
Confidence 997753 33344478899999999998 67888877654 89999986431 23333 56667888
Q ss_pred EEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcc------------------c-----------------c
Q 022111 155 VSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIW------------------K-----------------M 199 (302)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~------------------~-----------------~ 199 (302)
+.|+|++ +.|+.++.++..++|+...... . +
T Consensus 477 ~~~spdG--------------~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 542 (1045)
T 1k32_A 477 PAFDADS--------------KNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDL 542 (1045)
T ss_dssp EEECTTS--------------CEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCC
T ss_pred ceEcCCC--------------CEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccc
Confidence 9999874 6777777766666665321100 0 0
Q ss_pred ----ccccccccCCCceeEEEeeCCCCCCccEEEE-----------Eec--CCeEEEEEeccCCcceeeeeeccCCCcEE
Q 022111 200 ----DCFPALQMHSDWVRSVAWAPNLGLPKSTIAS-----------ASQ--DGTVVIWTCAKEGEQWEGRVLKDFKTPVW 262 (302)
Q Consensus 200 ----~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s-----------~s~--D~~i~iwd~~~~~~~~~~~~~~~~~~~v~ 262 (302)
..+..+..|.+.+.+++++|++ ..+++ .+. +..|.+||+..... ..+. ..+.
T Consensus 543 ~g~~~~~~~l~~~~~~~~~~~~s~dg----~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~----~~l~---~~v~ 611 (1045)
T 1k32_A 543 NDMYKRSSPINVDPGDYRMIIPLESS----ILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV----TEVK---NNLT 611 (1045)
T ss_dssp TTGGGGCEECSCCCBCEEEEEECSSE----EEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCE----EEEE---EEEE
T ss_pred cCHhHceEEcCCCCCChhheEEcCCC----eEEEEecccCcccccccccCCCceEEEEECCCCcE----EEee---cCcc
Confidence 0112334577789999999985 55664 122 44677777654321 1222 5688
Q ss_pred EEEEccCCCEEEEecCCceEEeeecCCc
Q 022111 263 SVSWSLTGNLLAVADANNVTLWKEAVDG 290 (302)
Q Consensus 263 ~~~~spdg~~la~~~~d~i~~w~~~~~~ 290 (302)
+++|||||++|++++.+.+++|+.....
T Consensus 612 ~~~~S~DG~~l~~~~~~~i~~~d~~~~~ 639 (1045)
T 1k32_A 612 DLRLSADRKTVMVRKDDGKIYTFPLEKP 639 (1045)
T ss_dssp EEEECTTSCEEEEEETTSCEEEEESSCT
T ss_pred eEEECCCCCEEEEEcCCcEEEEeCccCc
Confidence 9999999999999988899999986543
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.78 E-value=6.9e-18 Score=161.16 Aligned_cols=237 Identities=11% Similarity=0.093 Sum_probs=152.0
Q ss_pred EEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCccc---CeEEEEeeCCCCCCEEEEEeC---------CCeEEE
Q 022111 16 DVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRG---PVWQVAWAHPKFGSILASCSY---------DGQVII 83 (302)
Q Consensus 16 ~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~---~v~~v~~~~~~~~~~l~s~s~---------D~~i~i 83 (302)
++.|+||++++++ +.|++|++|++.++. ....+.+|.. .+.+++|+|+ |++|++++. |++|++
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~SpD--g~~la~~~~~~~~~~~s~~~~i~~ 94 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQ--SYTILSNRTMKSVNASNYGLSPD--RQFVYLESDYSKLWRYSYTATYYI 94 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCC--EEEEECHHHHHTTTCSEEEECTT--SSEEEEEEEEEECSSSCEEEEEEE
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCc--EEEEEccccccccceeeEEECCC--CCeEEEEecCceeEEeecceEEEE
Confidence 6789999976655 469999999987643 3334444543 3889999874 899988876 789999
Q ss_pred EEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCC------------
Q 022111 84 WKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVG------------ 151 (302)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~------------ 151 (302)
||+.++... ....+ ...+..++|||| |+.||.+. ++.|++|++.......+.. .++...
T Consensus 95 ~d~~~g~~~-~~~~l---~~~~~~~~~SPD--G~~la~~~-~~~i~~~~~~~g~~~~l~~--~~~~~~v~~g~~~~v~~e 165 (719)
T 1z68_A 95 YDLSNGEFV-RGNEL---PRPIQYLCWSPV--GSKLAYVY-QNNIYLKQRPGDPPFQITF--NGRENKIFNGIPDWVYEE 165 (719)
T ss_dssp EETTTTEEC-CSSCC---CSSBCCEEECSS--TTCEEEEE-TTEEEEESSTTSCCEECCC--CCBTTTEEESSCCHHHHH
T ss_pred EECCCCccc-cceec---CcccccceECCC--CCEEEEEE-CCeEEEEeCCCCCcEEEec--CCCcCCeEcccccceeee
Confidence 999765210 00122 356889999999 67888875 7899999986543322111 122211
Q ss_pred -----eEEEEeCCCCCCCceeecccCCCceeEEEeeCCC----------------------------------cEEEEEE
Q 022111 152 -----VTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN----------------------------------TVKVWKM 192 (302)
Q Consensus 152 -----v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~----------------------------------~v~iwd~ 192 (302)
..++.|+|++ +.|++++.|. .|++||+
T Consensus 166 e~~~~~~~~~wSPDG--------------~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~ 231 (719)
T 1z68_A 166 EMLATKYALWWSPNG--------------KFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDT 231 (719)
T ss_dssp HTTCSSCCEEECTTS--------------SEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEES
T ss_pred ecccCcccEEECCCC--------------CEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEEC
Confidence 1478999874 6777776542 7889998
Q ss_pred ecCcc----ccccccccccCCCceeEEEeeCCCCCCccEEEEEec--CC--eEEEEE----eccCCcceeeeee----cc
Q 022111 193 YNGIW----KMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQ--DG--TVVIWT----CAKEGEQWEGRVL----KD 256 (302)
Q Consensus 193 ~~~~~----~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~--D~--~i~iwd----~~~~~~~~~~~~~----~~ 256 (302)
.++.. .+.....+.+|...+.+++|+||+ ..+++... ++ .|.+|| +.... . ..+. ..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~----~~~~~~~~~~~~~~~l~~~d~~~~~~~g~--~-~~~~~~~~~~ 304 (719)
T 1z68_A 232 TYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDE----RVCLQWLKRVQNVSVLSICDFREDWQTWD--C-PKTQEHIEES 304 (719)
T ss_dssp SCHHHHCCEECCCCHHHHTSCEEEEEEEESSSS----EEEEEEEESSTTEEEEEEEEECSSSSSEE--C-CGGGEEEEEC
T ss_pred CCCCccceeEccCCccCCCCcceEEEeEEeCCC----eEEEEEeccccCeEEEEEEcccCCCCCCc--e-EEEEeccccc
Confidence 76531 111112345788899999999994 56666432 22 377777 43321 1 1122 23
Q ss_pred CCCcEE-----EEEEccCCCEEEE--ecCC---ceEEeeec
Q 022111 257 FKTPVW-----SVSWSLTGNLLAV--ADAN---NVTLWKEA 287 (302)
Q Consensus 257 ~~~~v~-----~~~~spdg~~la~--~~~d---~i~~w~~~ 287 (302)
+...+. .++|||||+.|+. ...+ .|.+|+..
T Consensus 305 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~ 345 (719)
T 1z68_A 305 RTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDT 345 (719)
T ss_dssp SSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSC
T ss_pred CCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECC
Confidence 444555 7899999996654 3233 36666643
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.77 E-value=3.6e-17 Score=152.56 Aligned_cols=229 Identities=12% Similarity=0.083 Sum_probs=153.6
Q ss_pred ccc-cceeEEEEccCCCEEEEeeC---CCcEEEEeecC--CCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEE
Q 022111 9 GHE-DTVHDVAMDFYGKRLATASS---DSSIKIIGLSN--SASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVI 82 (302)
Q Consensus 9 ~h~-~~v~~~~~s~~~~~l~s~~~---d~~v~lw~~~~--~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~ 82 (302)
.|. ..+..++|+|| +.+++++. +...+||.+.. .... . .+..+. .+...+|+++.++.++++++.|+ +.
T Consensus 61 ~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~-~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~-~~ 135 (582)
T 3o4h_A 61 REPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEE-Q-RLEAVK-PMRILSGVDTGEAVVFTGATEDR-VA 135 (582)
T ss_dssp SSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCC-E-ECTTSC-SBEEEEEEECSSCEEEEEECSSC-EE
T ss_pred cccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCcc-c-cccCCC-CceeeeeCCCCCeEEEEecCCCC-ce
Confidence 344 68999999999 78887765 56677876643 2222 1 332222 23345776653233455555555 45
Q ss_pred EEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecC----CcEEEEEecCCCCeeeeeecccCCCCeEEEEeC
Q 022111 83 IWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD----GNISVFTATADGGWDTTRIDQAHPVGVTSVSWA 158 (302)
Q Consensus 83 iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d----~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 158 (302)
+||+.++. ...+..+.. .+++|+|| |+.|++++.+ ..|++||+..... ..+. .|...+..++|+
T Consensus 136 l~d~~~g~----~~~l~~~~~--~~~~~spD--G~~la~~~~~~~~~~~i~~~d~~~g~~---~~l~-~~~~~~~~~~~S 203 (582)
T 3o4h_A 136 LYALDGGG----LRELARLPG--FGFVSDIR--GDLIAGLGFFGGGRVSLFTSNLSSGGL---RVFD-SGEGSFSSASIS 203 (582)
T ss_dssp EEEEETTE----EEEEEEESS--CEEEEEEE--TTEEEEEEEEETTEEEEEEEETTTCCC---EEEC-CSSCEEEEEEEC
T ss_pred EEEccCCc----EEEeecCCC--ceEEECCC--CCEEEEEEEcCCCCeEEEEEcCCCCCc---eEee-cCCCccccceEC
Confidence 99997652 222222322 88999998 7789988877 7788898764332 2332 566778999999
Q ss_pred CCCCCCceeecccCCCceeEEEeeCCC--cEEEEEEecCccccccccccccCCCceeEEE--------eeCCCCCCccEE
Q 022111 159 PAMAPGALVGLGLLDPVQKLASCGCDN--TVKVWKMYNGIWKMDCFPALQMHSDWVRSVA--------WAPNLGLPKSTI 228 (302)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~l~s~~~D~--~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~--------~~p~~~~~~~~l 228 (302)
|++ +.|+++..++ .|++||+.++.. . .+.+|...+.+++ |+||+ ..+
T Consensus 204 pDG--------------~~l~~~~~~~~~~i~~~d~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~spdg----~~~ 260 (582)
T 3o4h_A 204 PGM--------------KVTAGLETAREARLVTVDPRDGSV----E-DLELPSKDFSSYRPTAITWLGYLPDG----RLA 260 (582)
T ss_dssp TTS--------------CEEEEEECSSCEEEEEECTTTCCE----E-ECCCSCSHHHHHCCSEEEEEEECTTS----CEE
T ss_pred CCC--------------CEEEEccCCCeeEEEEEcCCCCcE----E-EccCCCcChhhhhhccccceeEcCCC----cEE
Confidence 974 7888888888 899999877632 2 4566777777777 99995 689
Q ss_pred EEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-c-eEEeee
Q 022111 229 ASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-N-VTLWKE 286 (302)
Q Consensus 229 ~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~-i~~w~~ 286 (302)
++++.|++++||++ +.. .......+.+++|+ ||+++++++.+ . -.+|..
T Consensus 261 ~~~~~~g~~~l~~~---g~~-----~~~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~ 311 (582)
T 3o4h_A 261 VVARREGRSAVFID---GER-----VEAPQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSL 311 (582)
T ss_dssp EEEEETTEEEEEET---TEE-----ECCCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred EEEEcCCcEEEEEE---CCe-----eccCCCceEEEEec-CCEEEEEEcCCCCCCeEEEE
Confidence 99999999999998 211 11233568899999 99988887665 2 344443
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.76 E-value=2.1e-15 Score=131.96 Aligned_cols=249 Identities=13% Similarity=0.084 Sum_probs=152.6
Q ss_pred CCCEEEEee----CCCcEEEEeecCCCc--eEEEEecCcccCeEEEEeeCCCCCCEEEEEeCC----CeEEEEEcCCC-C
Q 022111 22 YGKRLATAS----SDSSIKIIGLSNSAS--QHLATLKGHRGPVWQVAWAHPKFGSILASCSYD----GQVIIWKEGNQ-N 90 (302)
Q Consensus 22 ~~~~l~s~~----~d~~v~lw~~~~~~~--~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D----~~i~iwd~~~~-~ 90 (302)
...+++.|+ .++.|++|.+....+ ..+... |......++|+++ +++|++++.+ +.+.+|++... .
T Consensus 12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spd--g~~l~~~~~~~~~~~~v~~~~~~~~~g 87 (361)
T 3scy_A 12 SELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSAD--GKFVYSVNEFSKDQAAVSAFAFDKEKG 87 (361)
T ss_dssp GEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTT--SSEEEEEECCSSTTCEEEEEEEETTTT
T ss_pred CceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCC--CCEEEEEEccCCCCCcEEEEEEeCCCC
Confidence 344556664 467899998864333 333333 6667778999864 7888888876 79999998653 2
Q ss_pred ceeEEEEecCCCCCeeEEEecCCCCCcEEEEEe-cCCcEEEEEecCCCCeeee-e-ec-cc--------CCCCeEEEEeC
Q 022111 91 DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGS-SDGNISVFTATADGGWDTT-R-ID-QA--------HPVGVTSVSWA 158 (302)
Q Consensus 91 ~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~-~d~~v~~~~~~~~~~~~~~-~-~~-~~--------h~~~v~~~~~~ 158 (302)
....+.....+......+++ + +.+|++++ .++.+.+|++...+..... . .. .+ +...+.+++|+
T Consensus 88 ~~~~~~~~~~~~~~p~~~~~--d--g~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~s 163 (361)
T 3scy_A 88 TLHLLNTQKTMGADPCYLTT--N--GKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRIT 163 (361)
T ss_dssp EEEEEEEEECSSSCEEEEEE--C--SSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEEC
T ss_pred cEEEeeEeccCCCCcEEEEE--C--CCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEEC
Confidence 23344444445556677777 4 44555555 6889999998754432111 0 00 00 11224678888
Q ss_pred CCCCCCceeecccCCCce-eEEEeeCCCcEEEEEEecCcc----c-ccc----ccccccCCCceeEEEeeCCCCCCccEE
Q 022111 159 PAMAPGALVGLGLLDPVQ-KLASCGCDNTVKVWKMYNGIW----K-MDC----FPALQMHSDWVRSVAWAPNLGLPKSTI 228 (302)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~-~l~s~~~D~~v~iwd~~~~~~----~-~~~----~~~~~~h~~~v~~v~~~p~~~~~~~~l 228 (302)
|++ + .++++..++.|++|++..... . +.. ......+......++|+|++ +++
T Consensus 164 pdg--------------~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg----~~l 225 (361)
T 3scy_A 164 PDG--------------KYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDG----KFA 225 (361)
T ss_dssp TTS--------------SEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTS----SEE
T ss_pred CCC--------------CEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCC----CEE
Confidence 864 5 445555688999999975421 1 110 01112334557899999996 556
Q ss_pred EEEe-cCCeEEEEEeccCCcceeeee--eccCCCcEEEEEEccCCCEEEEecC---CceEEeeec-CCceEEEee
Q 022111 229 ASAS-QDGTVVIWTCAKEGEQWEGRV--LKDFKTPVWSVSWSLTGNLLAVADA---NNVTLWKEA-VDGEWQQVS 296 (302)
Q Consensus 229 ~s~s-~D~~i~iwd~~~~~~~~~~~~--~~~~~~~v~~~~~spdg~~la~~~~---d~i~~w~~~-~~~~~~~~~ 296 (302)
+.++ .++.|++|++........... ..........++|||||++|+++.. +.|.+|+.. ..|.+....
T Consensus 226 ~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~ 300 (361)
T 3scy_A 226 YLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVG 300 (361)
T ss_dssp EEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEE
T ss_pred EEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEee
Confidence 5555 699999999974311111111 1122244689999999998866643 369999985 456654443
No 159
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.75 E-value=1.1e-16 Score=153.64 Aligned_cols=244 Identities=11% Similarity=0.093 Sum_probs=153.4
Q ss_pred ccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccC-----eEEEEeeCCCCCCEEEEEeCC-------
Q 022111 11 EDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGP-----VWQVAWAHPKFGSILASCSYD------- 78 (302)
Q Consensus 11 ~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~-----v~~v~~~~~~~~~~l~s~s~D------- 78 (302)
.....++.|+||+++++++ |++|++|++.++. ....+.+|... ...++|+|+ |++|+.++.+
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Spd--g~~l~~~~~~~~~~r~~ 89 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGN--SSVFLENSTFDEFGHSINDYSISPD--GQFILLEYNYVKQWRHS 89 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCC--EEEEECTTTTTTCCSCCCEEEECTT--SSEEEEEEEEEECSSSC
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCc--eEEEEechhhhhhcccccceEECCC--CCEEEEEECCeeeEEEc
Confidence 3446678999999988886 9999999987654 33446666533 234778874 8999988876
Q ss_pred --CeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCC------
Q 022111 79 --GQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPV------ 150 (302)
Q Consensus 79 --~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~------ 150 (302)
+.+.+||+.++. ...+..|...+...+|||| |+.||.+ .++.|++|+...+....+.. . ++..
T Consensus 90 ~~~~~~~~d~~~~~----~~~l~~~~~~~~~~~~SPd--G~~la~~-~~~~i~~~~~~~~~~~~lt~-~-g~~~~~~~g~ 160 (740)
T 4a5s_A 90 YTASYDIYDLNKRQ----LITEERIPNNTQWVTWSPV--GHKLAYV-WNNDIYVKIEPNLPSYRITW-T-GKEDIIYNGI 160 (740)
T ss_dssp EEEEEEEEETTTTE----ECCSSCCCTTEEEEEECSS--TTCEEEE-ETTEEEEESSTTSCCEECCS-C-CBTTTEEESB
T ss_pred cceEEEEEECCCCc----EEEcccCCCcceeeEECCC--CCEEEEE-ECCeEEEEECCCCceEEEcC-C-CCccceecCc
Confidence 456699997752 3456677888999999999 7788887 46899999876443322211 1 2211
Q ss_pred -----------CeEEEEeCCCCCCCceeecccCCCceeEEEeeCC-----------------------------------
Q 022111 151 -----------GVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD----------------------------------- 184 (302)
Q Consensus 151 -----------~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D----------------------------------- 184 (302)
....+.|||++ +.||..+.|
T Consensus 161 ~~~v~~ee~~~~~~~~~wSpDg--------------~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~ 226 (740)
T 4a5s_A 161 TDWVYEEEVFSAYSALWWSPNG--------------TFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNP 226 (740)
T ss_dssp CCHHHHHHTSSSSBCEEECTTS--------------SEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCC
T ss_pred ccccccchhcCCCcceEECCCC--------------CEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCC
Confidence 12358899975 333333221
Q ss_pred -CcEEEEEEec---Cc--ccccc--ccccccCCCceeEEEeeCCCCCCccEEEEEe----cCCeEEEEEeccCCcce---
Q 022111 185 -NTVKVWKMYN---GI--WKMDC--FPALQMHSDWVRSVAWAPNLGLPKSTIASAS----QDGTVVIWTCAKEGEQW--- 249 (302)
Q Consensus 185 -~~v~iwd~~~---~~--~~~~~--~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s----~D~~i~iwd~~~~~~~~--- 249 (302)
..|++||+.+ +. ..... ...+.+|...+..++|+||+ +.++... .+..|++||+......+
T Consensus 227 ~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg----~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~ 302 (740)
T 4a5s_A 227 TVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQE----RISLQWLRRIQNYSVMDICDYDESSGRWNCL 302 (740)
T ss_dssp EEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETT----EEEEEEEESSTTEEEEEEEEEETTTTEEEEC
T ss_pred eeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCC----eEEEEEeCCCCCEEEEEEEECCCCcccccee
Confidence 1477788776 41 01010 00122488889999999996 5455443 23479999987643100
Q ss_pred -eeee-eccCCCcEE-----EEEEccCCCEEE-EecC-C---ceEEeeec
Q 022111 250 -EGRV-LKDFKTPVW-----SVSWSLTGNLLA-VADA-N---NVTLWKEA 287 (302)
Q Consensus 250 -~~~~-~~~~~~~v~-----~~~~spdg~~la-~~~~-d---~i~~w~~~ 287 (302)
...+ ...+...|. +.+|||||+.|+ ..+. + .|.+|+..
T Consensus 303 ~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~ 352 (740)
T 4a5s_A 303 VARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQID 352 (740)
T ss_dssp GGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETT
T ss_pred EEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECC
Confidence 0011 122333333 688999999877 5543 2 37777653
No 160
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.72 E-value=4.2e-14 Score=119.65 Aligned_cols=240 Identities=11% Similarity=0.115 Sum_probs=160.6
Q ss_pred ccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEec------CcccCeEEEEeeCCCCCCEEEEEeC-CCeE
Q 022111 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLK------GHRGPVWQVAWAHPKFGSILASCSY-DGQV 81 (302)
Q Consensus 9 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~------~h~~~v~~v~~~~~~~~~~l~s~s~-D~~i 81 (302)
+|-..+.+++++++++++++...++.|++|+.... .+..+. +|...+..+++.++ +++++++... ++.|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~---~~~~~~~~~~~~~~~~~p~~i~~~~~-~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR---FKFQFGECGKRDSQLLYPNRVAVVRN-SGDIIVTERSPTHQI 102 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSC---EEEEECCBSSSTTCBSSEEEEEEETT-TTEEEEEECGGGCEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCCc---EEEEecccCCCcccccCceEEEEEcC-CCeEEEEcCCCCCEE
Confidence 45567889999999998888888999999997532 233332 34557889998533 3667666643 8899
Q ss_pred EEEEcCCCCceeEEEEec-CCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeec-ccCCCCeEEEEeCC
Q 022111 82 IIWKEGNQNDWTQAHTFN-DHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRID-QAHPVGVTSVSWAP 159 (302)
Q Consensus 82 ~iwd~~~~~~~~~~~~~~-~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~ 159 (302)
.+||. ++. ....+. .+...+..+++.|+ +.++++...++.|.+|+.. +.. ...+. ..+...+..++++|
T Consensus 103 ~~~d~-~g~---~~~~~~~~~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~~~--g~~-~~~~~~~~~~~~p~~i~~~~ 173 (286)
T 1q7f_A 103 QIYNQ-YGQ---FVRKFGATILQHPRGVTVDNK--GRIIVVECKVMRVIIFDQN--GNV-LHKFGCSKHLEFPNGVVVND 173 (286)
T ss_dssp EEECT-TSC---EEEEECTTTCSCEEEEEECTT--SCEEEEETTTTEEEEECTT--SCE-EEEEECTTTCSSEEEEEECS
T ss_pred EEECC-CCc---EEEEecCccCCCceEEEEeCC--CCEEEEECCCCEEEEEcCC--CCE-EEEeCCCCccCCcEEEEECC
Confidence 99984 332 334443 24457899999987 6677777778899999843 222 12221 12334567888877
Q ss_pred CCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccc--cCCCceeEEEeeCCCCCCccEEEEEecCC-e
Q 022111 160 AMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQ--MHSDWVRSVAWAPNLGLPKSTIASASQDG-T 236 (302)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~--~h~~~v~~v~~~p~~~~~~~~l~s~s~D~-~ 236 (302)
+ +.++++...++.|++||.... .+..+. ++...+..|+++|++ +.+++...++ .
T Consensus 174 ~--------------g~l~v~~~~~~~i~~~~~~g~-----~~~~~~~~g~~~~p~~i~~d~~G----~l~v~~~~~~~~ 230 (286)
T 1q7f_A 174 K--------------QEIFISDNRAHCVKVFNYEGQ-----YLRQIGGEGITNYPIGVGINSNG----EILIADNHNNFN 230 (286)
T ss_dssp S--------------SEEEEEEGGGTEEEEEETTCC-----EEEEESCTTTSCSEEEEEECTTC----CEEEEECSSSCE
T ss_pred C--------------CCEEEEECCCCEEEEEcCCCC-----EEEEEccCCccCCCcEEEECCCC----CEEEEeCCCCEE
Confidence 5 467777788899999997432 122232 334678999999985 6778877775 9
Q ss_pred EEEEEeccCCcceeeeeecc-CCCcEEEEEEccCCCEEEEecCCceEEeeec
Q 022111 237 VVIWTCAKEGEQWEGRVLKD-FKTPVWSVSWSLTGNLLAVADANNVTLWKEA 287 (302)
Q Consensus 237 i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~spdg~~la~~~~d~i~~w~~~ 287 (302)
|++||.... ....+... ....+.+++++|+|+++++...+.|++|+..
T Consensus 231 i~~~~~~g~---~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~ 279 (286)
T 1q7f_A 231 LTIFTQDGQ---LISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYV 279 (286)
T ss_dssp EEEECTTSC---EEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECS
T ss_pred EEEECCCCC---EEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEcc
Confidence 999985421 11122111 1234789999999987777543379999864
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.71 E-value=4e-16 Score=148.94 Aligned_cols=238 Identities=14% Similarity=0.180 Sum_probs=149.3
Q ss_pred ceeEEEEccCCCEEEEeeC---------CCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEE
Q 022111 13 TVHDVAMDFYGKRLATASS---------DSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~~~---------d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~i 83 (302)
.+.+++|||||++||.++. |++|++||+.++.......+ ...+..++|+|+ |+.||+++ |+.|++
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPD--G~~la~~~-~~~i~~ 134 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPV--GSKLAYVY-QNNIYL 134 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSS--TTCEEEEE-TTEEEE
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCC--CCEEEEEE-CCeEEE
Confidence 3889999999999998876 78999999865422000222 245888999875 88998875 789999
Q ss_pred EEcCCCCceeEEEEecCCCCCe-----------------eEEEecCCCCCcEEEEEecCC--------------------
Q 022111 84 WKEGNQNDWTQAHTFNDHKSSV-----------------NSIAWAPHELGLSLACGSSDG-------------------- 126 (302)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~i-----------------~~l~~~pd~~~~~l~sg~~d~-------------------- 126 (302)
|++.++... .+ +..++...| .+++|+|| |+.|++++.|.
T Consensus 135 ~~~~~g~~~-~l-~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPD--G~~la~~~~d~~~~~~~~~~~~~~~~~~~~~ 210 (719)
T 1z68_A 135 KQRPGDPPF-QI-TFNGRENKIFNGIPDWVYEEEMLATKYALWWSPN--GKFLAYAEFNDTDIPVIAYSYYGDEQYPRTI 210 (719)
T ss_dssp ESSTTSCCE-EC-CCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTT--SSEEEEEEEECTTSCEEEEEECCSSSSCEEE
T ss_pred EeCCCCCcE-EE-ecCCCcCCeEcccccceeeeecccCcccEEECCC--CCEEEEEEECCCCCceEEeeccCCCCCccce
Confidence 998765321 11 112222222 58999999 77899887652
Q ss_pred --------------cEEEEEecCCCCe---eee---eecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeC--C
Q 022111 127 --------------NISVFTATADGGW---DTT---RIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGC--D 184 (302)
Q Consensus 127 --------------~v~~~~~~~~~~~---~~~---~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~--D 184 (302)
.|++||+...... .+. .+ ..|...+.+++|+|++ +.+++... +
T Consensus 211 ~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~SpD~--------------~~~~~~~~~~~ 275 (719)
T 1z68_A 211 NIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMI-ASSDYYFSWLTWVTDE--------------RVCLQWLKRVQ 275 (719)
T ss_dssp EEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHH-HTSCEEEEEEEESSSS--------------EEEEEEEESST
T ss_pred eecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccC-CCCcceEEEeEEeCCC--------------eEEEEEecccc
Confidence 6778877532110 110 01 1466678899999963 55665432 2
Q ss_pred --CcEEEEE----EecCcccccccccc----ccCCCcee-----EEEeeCCCCCCccEE--EEEecCCe--EEEEEeccC
Q 022111 185 --NTVKVWK----MYNGIWKMDCFPAL----QMHSDWVR-----SVAWAPNLGLPKSTI--ASASQDGT--VVIWTCAKE 245 (302)
Q Consensus 185 --~~v~iwd----~~~~~~~~~~~~~~----~~h~~~v~-----~v~~~p~~~~~~~~l--~s~s~D~~--i~iwd~~~~ 245 (302)
..|.+|| +.++. +...+ .+|..++. ++.|+||+ +.| ++...++. |.+||+...
T Consensus 276 ~~~~l~~~d~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~spdg----~~l~~~~~~~~g~~~l~~~~~~~~ 347 (719)
T 1z68_A 276 NVSVLSICDFREDWQTWD----CPKTQEHIEESRTGWAGGFFVSTPVFSYDA----ISYYKIFSDKDGYKHIHYIKDTVE 347 (719)
T ss_dssp TEEEEEEEEECSSSSSEE----CCGGGEEEEECSSSCSSSSSCCCCEECTTS----SCEEEEEECTTSCEEEEEESSCST
T ss_pred CeEEEEEEcccCCCCCCc----eEEEEecccccCCceEccccCCccEECCCC----CeEEEEEEccCCceEEEEEECCCC
Confidence 2377888 54442 22233 46778887 89999996 433 34556665 555554332
Q ss_pred CcceeeeeeccCCCcEEEEEEccCCCEEEEec-C----C-ceEEeeecC
Q 022111 246 GEQWEGRVLKDFKTPVWSVSWSLTGNLLAVAD-A----N-NVTLWKEAV 288 (302)
Q Consensus 246 ~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~-~----d-~i~~w~~~~ 288 (302)
. ...+......+..+.++ +|+.|+..+ . + ..+||....
T Consensus 348 ~----~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 348 N----AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp T----CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred c----eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 1 12233444557777777 777665554 3 2 589998754
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.71 E-value=3.3e-14 Score=124.96 Aligned_cols=243 Identities=10% Similarity=0.095 Sum_probs=149.3
Q ss_pred EEEEeeCC--CcEEEEeecCCCce--EEEEec-CcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcC-CCCceeEEEEe
Q 022111 25 RLATASSD--SSIKIIGLSNSASQ--HLATLK-GHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEG-NQNDWTQAHTF 98 (302)
Q Consensus 25 ~l~s~~~d--~~v~lw~~~~~~~~--~~~~~~-~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~-~~~~~~~~~~~ 98 (302)
+|+.|+.. +.|.+|+++...++ .+.... ++...+..++|+++ +++|++++.+ .+.+|++. ++. .......
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spd--g~~l~~~~~~-~v~~~~~~~~g~-~~~~~~~ 79 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHE--RKNIYGAAMK-KWSSFAVKSPTE-IVHEASH 79 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTT--SSEEEEEEBT-EEEEEEEEETTE-EEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCC--CCEEEEEccc-eEEEEEECCCCC-EEEeeEe
Confidence 45556543 56888887543332 222221 23345778999864 7888888888 99999986 432 1111121
Q ss_pred cCCCCCeeEEEecCCCCCc--EEEEEe-------------cCCcEEEEEecCCCCeee-ee-ecccCCCCeEEEEeCCCC
Q 022111 99 NDHKSSVNSIAWAPHELGL--SLACGS-------------SDGNISVFTATADGGWDT-TR-IDQAHPVGVTSVSWAPAM 161 (302)
Q Consensus 99 ~~h~~~i~~l~~~pd~~~~--~l~sg~-------------~d~~v~~~~~~~~~~~~~-~~-~~~~h~~~v~~~~~~~~~ 161 (302)
..+ +.+..++|+|| |. ++++++ .++.+.+|++...+.... .. +...+...+.++.|+|++
T Consensus 80 ~~~-g~~~~~~~spd--g~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG 156 (365)
T 1jof_A 80 PIG-GHPRANDADTN--TRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTE 156 (365)
T ss_dssp ECC-SSGGGGCTTSC--CEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTS
T ss_pred ecC-CCCccEEECCC--CCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCC
Confidence 111 23567889998 55 355553 689999999975443321 11 111234567889999864
Q ss_pred CCCceeecccCCCceeEEEee-CCCcEEEEEEe-cCccccccccccc--cCCCceeEEEeeCCCCCCccEEEEEec-CCe
Q 022111 162 APGALVGLGLLDPVQKLASCG-CDNTVKVWKMY-NGIWKMDCFPALQ--MHSDWVRSVAWAPNLGLPKSTIASASQ-DGT 236 (302)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~s~~-~D~~v~iwd~~-~~~~~~~~~~~~~--~h~~~v~~v~~~p~~~~~~~~l~s~s~-D~~ 236 (302)
++|+++. .++.|++||+. ++.. ..+..+. .|...+..++|+|++ ++++++++ ++.
T Consensus 157 --------------~~l~~~~~~~~~v~~~~~~~~g~~--~~~~~~~~~~~g~~p~~~~~spdg----~~l~v~~~~~~~ 216 (365)
T 1jof_A 157 --------------TYLYSADLTANKLWTHRKLASGEV--ELVGSVDAPDPGDHPRWVAMHPTG----NYLYALMEAGNR 216 (365)
T ss_dssp --------------SEEEEEETTTTEEEEEEECTTSCE--EEEEEEECSSTTCCEEEEEECTTS----SEEEEEETTTTE
T ss_pred --------------CEEEEEcCCCCEEEEEEECCCCCE--EEeeeEecCCCCCCCCEeEECCCC----CEEEEEECCCCe
Confidence 5566554 46789999997 5532 1122222 245678999999996 56666664 789
Q ss_pred EEEEEeccCCccee-----eeeec-cC---CC------cEEEEE-EccCCCEEEEecC--C-----ceEEeeecCCceEE
Q 022111 237 VVIWTCAKEGEQWE-----GRVLK-DF---KT------PVWSVS-WSLTGNLLAVADA--N-----NVTLWKEAVDGEWQ 293 (302)
Q Consensus 237 i~iwd~~~~~~~~~-----~~~~~-~~---~~------~v~~~~-~spdg~~la~~~~--d-----~i~~w~~~~~~~~~ 293 (302)
|++|+++....... ...+. ++ .. .+..++ |||||++|++++. + .|.+|+....|...
T Consensus 217 v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~ 296 (365)
T 1jof_A 217 ICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIE 296 (365)
T ss_dssp EEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEE
T ss_pred EEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEE
Confidence 99998864211111 01111 11 11 488999 9999998877643 4 69999986556655
Q ss_pred E
Q 022111 294 Q 294 (302)
Q Consensus 294 ~ 294 (302)
.
T Consensus 297 ~ 297 (365)
T 1jof_A 297 K 297 (365)
T ss_dssp E
T ss_pred E
Confidence 3
No 163
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.70 E-value=4.3e-15 Score=127.92 Aligned_cols=225 Identities=13% Similarity=0.118 Sum_probs=142.8
Q ss_pred CEEEEeeCCCcEEEEeecCCCceEEEEec-Cccc-CeEEEEeeCCCCCCE-EEEEeCCCeEEEEEcCCCCceeEEEEecC
Q 022111 24 KRLATASSDSSIKIIGLSNSASQHLATLK-GHRG-PVWQVAWAHPKFGSI-LASCSYDGQVIIWKEGNQNDWTQAHTFND 100 (302)
Q Consensus 24 ~~l~s~~~d~~v~lw~~~~~~~~~~~~~~-~h~~-~v~~v~~~~~~~~~~-l~s~s~D~~i~iwd~~~~~~~~~~~~~~~ 100 (302)
++|++++.+++|++||..+. +.+..+. ++.. .+..++|+++ +++ +++++.++.|.+||+.+.. ....+..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~~~s~d--g~~l~v~~~~~~~v~~~d~~~~~---~~~~~~~ 74 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKM--AVDKVITIADAGPTPMVPMVAPG--GRIAYATVNKSESLVKIDLVTGE---TLGRIDL 74 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT--EEEEEEECTTCTTCCCCEEECTT--SSEEEEEETTTTEEEEEETTTCC---EEEEEEC
T ss_pred cEEEEcCCCCeEEEEECCCC--cEEEEEEcCCCCCCccceEEcCC--CCEEEEEeCCCCeEEEEECCCCC---eEeeEEc
Confidence 47899999999999998653 4444443 2221 4778999864 654 5666778999999987653 3333331
Q ss_pred -C----CCCeeEEEecCCCCCcEEEEEe------------cCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCC
Q 022111 101 -H----KSSVNSIAWAPHELGLSLACGS------------SDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAP 163 (302)
Q Consensus 101 -h----~~~i~~l~~~pd~~~~~l~sg~------------~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 163 (302)
+ ...+..++|+|+ +..+++++ .++.|.+||..... ....+. ....+..+.|+|++
T Consensus 75 ~~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~--~~~~~~--~~~~~~~~~~s~dg-- 146 (337)
T 1pby_B 75 STPEERVKSLFGAALSPD--GKTLAIYESPVRLELTHFEVQPTRVALYDAETLS--RRKAFE--APRQITMLAWARDG-- 146 (337)
T ss_dssp CBTTEEEECTTCEEECTT--SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE--EEEEEE--CCSSCCCEEECTTS--
T ss_pred CCcccccccccceEECCC--CCEEEEEecccccccccccccCceEEEEECCCCc--EEEEEe--CCCCcceeEECCCC--
Confidence 1 226788999998 65777775 57999999986432 112222 23346677888864
Q ss_pred CceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCC--------
Q 022111 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDG-------- 235 (302)
Q Consensus 164 ~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~-------- 235 (302)
+.|+++ ++.|++||+.++.. ...+..+. +...+.|+|++. ..++++..++
T Consensus 147 ------------~~l~~~--~~~i~~~d~~~~~~----~~~~~~~~-~~~~~~~s~dg~---~l~~~~~~~~~~~~~~~~ 204 (337)
T 1pby_B 147 ------------SKLYGL--GRDLHVMDPEAGTL----VEDKPIQS-WEAETYAQPDVL---AVWNQHESSGVMATPFYT 204 (337)
T ss_dssp ------------SCEEEE--SSSEEEEETTTTEE----EEEECSTT-TTTTTBCCCBCC---CCCCCCTTTTEEEEEEEE
T ss_pred ------------CEEEEe--CCeEEEEECCCCcE----eeeeeccc-cCCCceeCCCcc---EEeeeccCCCceeeeeec
Confidence 556666 68899999876632 12222221 011236788862 2223333333
Q ss_pred ---------------eEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCCceEEeeecC
Q 022111 236 ---------------TVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAV 288 (302)
Q Consensus 236 ---------------~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d~i~~w~~~~ 288 (302)
.|.+||+...... ......+...+.+++|+|||++|+++ .+.|.+|+...
T Consensus 205 ~~~~~~~~~~~~~~~~v~~~d~~~~~~~--~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~ 269 (337)
T 1pby_B 205 ARKDIDPADPTAYRTGLLTMDLETGEMA--MREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEK 269 (337)
T ss_dssp EBTTSCTTSGGGEEEEEEEEETTTCCEE--EEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEETTT
T ss_pred cccccccccccccccceEEEeCCCCCce--EeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEECCC
Confidence 4688888754221 11123344568899999999999888 45899999754
No 164
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.69 E-value=3.5e-14 Score=123.06 Aligned_cols=247 Identities=12% Similarity=0.063 Sum_probs=160.8
Q ss_pred ccceeEEEEccCCCEEEEeeCC------------------------CcEEEEeecCCCceEEEEec-CcccCeEEEEeeC
Q 022111 11 EDTVHDVAMDFYGKRLATASSD------------------------SSIKIIGLSNSASQHLATLK-GHRGPVWQVAWAH 65 (302)
Q Consensus 11 ~~~v~~~~~s~~~~~l~s~~~d------------------------~~v~lw~~~~~~~~~~~~~~-~h~~~v~~v~~~~ 65 (302)
-..+.+++++++|+++++...+ ++|.+||..++ +.+..+. ++-.....|++.+
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA--EILQSSGKNLFYLPHGLSIDT 100 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC--CEEEEECTTTCSSEEEEEECT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC--eEEeccCCCccCCceEEEECC
Confidence 3568999999999999888777 47999987543 3333343 4545678999975
Q ss_pred CCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEe---------cCCCCCeeEEEecCCCCCcEEEEEe-cCCcEEEEEecC
Q 022111 66 PKFGSILASCSYDGQVIIWKEGNQNDWTQAHTF---------NDHKSSVNSIAWAPHELGLSLACGS-SDGNISVFTATA 135 (302)
Q Consensus 66 ~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~---------~~h~~~i~~l~~~pd~~~~~l~sg~-~d~~v~~~~~~~ 135 (302)
+|+++++...++.|++||..... ..+..+ ..+......++++|+. +.++++.+ .++.|++|+.
T Consensus 101 --~g~l~v~d~~~~~v~~~~~~g~~--~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~-g~lyv~d~~~~~~I~~~~~-- 173 (329)
T 3fvz_A 101 --DGNYWVTDVALHQVFKLDPHSKE--GPLLILGRSMQPGSDQNHFCQPTDVAVEPST-GAVFVSDGYCNSRIVQFSP-- 173 (329)
T ss_dssp --TSCEEEEETTTTEEEEECTTCSS--CCSEEESBTTBCCCSTTCCSSEEEEEECTTT-CCEEEEECSSCCEEEEECT--
T ss_pred --CCCEEEEECCCCEEEEEeCCCCe--EEEEEecccCCCCCCccccCCCcEEEEeCCC-CeEEEEeCCCCCeEEEEcC--
Confidence 37888888889999999975431 122333 2345578999999942 56777775 6899999983
Q ss_pred CCCeeeeeecc---------cCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcccccccccc-
Q 022111 136 DGGWDTTRIDQ---------AHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPAL- 205 (302)
Q Consensus 136 ~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~- 205 (302)
.+... ..+.. .+......++++|+. +.++++...++.|++||..++. .+..+
T Consensus 174 ~g~~~-~~~~~~g~~~~~~~~~~~~p~gia~d~~~-------------g~l~v~d~~~~~I~~~~~~~G~----~~~~~~ 235 (329)
T 3fvz_A 174 SGKFV-TQWGEESSGSSPRPGQFSVPHSLALVPHL-------------DQLCVADRENGRIQCFKTDTKE----FVREIK 235 (329)
T ss_dssp TSCEE-EEECEECCSSSCCTTEESCEEEEEEETTT-------------TEEEEEETTTTEEEEEETTTCC----EEEEEC
T ss_pred CCCEE-EEeccCCCCCCCCCcccCCCcEEEEECCC-------------CEEEEEECCCCEEEEEECCCCc----EEEEEe
Confidence 22221 11110 111235667776642 4778888889999999987553 22222
Q ss_pred -ccCCCceeEEEeeCCCCC---CccEEEEEecCCeEEEEEeccCCcceeeeee--ccCCCcEEEEEEccCCCEEEEecCC
Q 022111 206 -QMHSDWVRSVAWAPNLGL---PKSTIASASQDGTVVIWTCAKEGEQWEGRVL--KDFKTPVWSVSWSLTGNLLAVADAN 279 (302)
Q Consensus 206 -~~h~~~v~~v~~~p~~~~---~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~--~~~~~~v~~~~~spdg~~la~~~~d 279 (302)
..+...+.+++|+| +.. +++..++.+.+..|++||...... ...+. ......+.+|+++|+|+++++...+
T Consensus 236 ~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~--~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~ 312 (329)
T 3fvz_A 236 HASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEI--IDVFKPVRKHFDMPHDIVASEDGTVYIGDAHT 312 (329)
T ss_dssp CTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCE--EEEECCSSSCCSSEEEEEECTTSEEEEEESSS
T ss_pred ccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeE--EEEEcCCCCccCCeeEEEECCCCCEEEEECCC
Confidence 34667789999999 200 012233334456899999765421 11111 2334568999999999777766656
Q ss_pred -ceEEeeec
Q 022111 280 -NVTLWKEA 287 (302)
Q Consensus 280 -~i~~w~~~ 287 (302)
.|++|+..
T Consensus 313 ~~I~~~~~~ 321 (329)
T 3fvz_A 313 NTVWKFTLT 321 (329)
T ss_dssp CCEEEEEEE
T ss_pred CEEEEEeCC
Confidence 79999864
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.68 E-value=2.9e-15 Score=132.04 Aligned_cols=240 Identities=10% Similarity=0.034 Sum_probs=143.0
Q ss_pred EEEccCCCEEEEeeC-CCc--EEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCcee
Q 022111 17 VAMDFYGKRLATASS-DSS--IKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWT 93 (302)
Q Consensus 17 ~~~s~~~~~l~s~~~-d~~--v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~ 93 (302)
.+|+|||++|+.++. ++. |.+||+.+ .+......+|...+..++|+|+ |+.|+.++.++.+.+||+.++..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~--g~~~~lt~~~~~~~~~~~~spd--g~~l~~~~~~~~l~~~d~~~g~~-- 114 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNT--QVATQLTEGRGDNTFGGFLSPD--DDALFYVKDGRNLMRVDLATLEE-- 114 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTT--CEEEECCCSSCBCSSSCEECTT--SSEEEEEETTTEEEEEETTTCCE--
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCC--CceEEeeeCCCCCccceEEcCC--CCEEEEEeCCCeEEEEECCCCcc--
Confidence 789999999998887 675 56666644 3443444556655656789874 89999999999999999977532
Q ss_pred EEEEecCCCCCeeEEEe--cCCCCCcEEEEE----------------------ecCCcEEEEEecCCCCeeeeeecccCC
Q 022111 94 QAHTFNDHKSSVNSIAW--APHELGLSLACG----------------------SSDGNISVFTATADGGWDTTRIDQAHP 149 (302)
Q Consensus 94 ~~~~~~~h~~~i~~l~~--~pd~~~~~l~sg----------------------~~d~~v~~~~~~~~~~~~~~~~~~~h~ 149 (302)
...+..+...+....| +|+ +..++.. ..+..|.+||+.... . ..+. .+.
T Consensus 115 -~~~~~~~~~~~~~~~~~~~~d--g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~-~--~~l~-~~~ 187 (388)
T 3pe7_A 115 -NVVYQVPAEWVGYGTWVANSD--CTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE-S--TVIL-QEN 187 (388)
T ss_dssp -EEEEECCTTEEEEEEEEECTT--SSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC-E--EEEE-EES
T ss_pred -eeeeechhhcccccceeECCC--CCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc-e--EEee-cCC
Confidence 2233345555544444 676 5566532 234677888876432 2 2222 344
Q ss_pred CCeEEEEeCC-CCCCCceeecccCCCceeEEEeeCC------CcEEEEEEecCccccccccccccCC--CceeEEEeeCC
Q 022111 150 VGVTSVSWAP-AMAPGALVGLGLLDPVQKLASCGCD------NTVKVWKMYNGIWKMDCFPALQMHS--DWVRSVAWAPN 220 (302)
Q Consensus 150 ~~v~~~~~~~-~~~~~~~~~~~~~~~~~~l~s~~~D------~~v~iwd~~~~~~~~~~~~~~~~h~--~~v~~v~~~p~ 220 (302)
..+..+.|+| ++ +.|+.++.+ ..|.++|+.++. ...+..+. ..+..++|+||
T Consensus 188 ~~~~~~~~sp~dg--------------~~l~~~~~~~~~~~~~~l~~~d~~~~~-----~~~l~~~~~~~~~~~~~~spd 248 (388)
T 3pe7_A 188 QWLGHPIYRPYDD--------------STVAFCHEGPHDLVDARMWLINEDGTN-----MRKVKTHAEGESCTHEFWVPD 248 (388)
T ss_dssp SCEEEEEEETTEE--------------EEEEEEECSCTTTSSCSEEEEETTSCC-----CEESCCCCTTEEEEEEEECTT
T ss_pred ccccccEECCCCC--------------CEEEEEEecCCCCCcceEEEEeCCCCc-----eEEeeeCCCCcccccceECCC
Confidence 5678899998 63 666666543 256666654432 12233333 35888999999
Q ss_pred CCCCccEEEEEec-CC----eEEEEEeccCCcceeeeeeccCCCc---EEEEEEccCCCEEEEe---------cCC-ceE
Q 022111 221 LGLPKSTIASASQ-DG----TVVIWTCAKEGEQWEGRVLKDFKTP---VWSVSWSLTGNLLAVA---------DAN-NVT 282 (302)
Q Consensus 221 ~~~~~~~l~s~s~-D~----~i~iwd~~~~~~~~~~~~~~~~~~~---v~~~~~spdg~~la~~---------~~d-~i~ 282 (302)
+ +.|+..+. ++ .|.+||+.......... ....... ...++|||||+.|+.. ..+ .|.
T Consensus 249 g----~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~ 323 (388)
T 3pe7_A 249 G----SALVYVSYLKGSPDRFIYSADPETLENRQLTS-MPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLY 323 (388)
T ss_dssp S----SCEEEEEEETTCCCEEEEEECTTTCCEEEEEE-ECCEEEEEECTTSSEEEEEECCC------------CCCCEEE
T ss_pred C----CEEEEEecCCCCCcceEEEEecCCCceEEEEc-CCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEE
Confidence 6 55655443 22 39999987543211101 1110000 1123799999988764 233 699
Q ss_pred EeeecCCceEEE
Q 022111 283 LWKEAVDGEWQQ 294 (302)
Q Consensus 283 ~w~~~~~~~~~~ 294 (302)
+|+... ++..+
T Consensus 324 ~~d~~~-~~~~~ 334 (388)
T 3pe7_A 324 VFNMKN-GTQHR 334 (388)
T ss_dssp EEETTT-TEEEE
T ss_pred EEeccC-CceEE
Confidence 999754 44333
No 166
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.67 E-value=1.2e-15 Score=134.61 Aligned_cols=246 Identities=8% Similarity=0.025 Sum_probs=146.4
Q ss_pred ccccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEE-----------
Q 022111 7 ETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASC----------- 75 (302)
Q Consensus 7 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~----------- 75 (302)
..+|...+..+.|+|||+.|+.++.++.+++||+.......+ +..+...+....|....++++++..
T Consensus 76 t~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~--~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~ 153 (388)
T 3pe7_A 76 TEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVV--YQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLT 153 (388)
T ss_dssp CCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEE--EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC
T ss_pred eeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceee--eechhhcccccceeECCCCCeeccccccCccccccc
Confidence 345555555678999999999999999999999976543333 3334444443443211247777642
Q ss_pred -----------eCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecC-CCCCcEEEEEecC------CcEEEEEecCCC
Q 022111 76 -----------SYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP-HELGLSLACGSSD------GNISVFTATADG 137 (302)
Q Consensus 76 -----------s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~p-d~~~~~l~sg~~d------~~v~~~~~~~~~ 137 (302)
..+..|.+||+.++. ...+..+...+..++|+| | +..|+....+ ..|.+++.....
T Consensus 154 ~~~~~~~~~~~~~~~~l~~~d~~~g~----~~~l~~~~~~~~~~~~sp~d--g~~l~~~~~~~~~~~~~~l~~~d~~~~~ 227 (388)
T 3pe7_A 154 DWKKFHEFYFTKPCCRLMRVDLKTGE----STVILQENQWLGHPIYRPYD--DSTVAFCHEGPHDLVDARMWLINEDGTN 227 (388)
T ss_dssp SHHHHHHHGGGCCCEEEEEEETTTCC----EEEEEEESSCEEEEEEETTE--EEEEEEEECSCTTTSSCSEEEEETTSCC
T ss_pred ccchhhhhhccCCcceEEEEECCCCc----eEEeecCCccccccEECCCC--CCEEEEEEecCCCCCcceEEEEeCCCCc
Confidence 244678999987653 233334667789999999 7 6677776653 256666654221
Q ss_pred CeeeeeecccCC-CCeEEEEeCCCCCCCceeecccCCCceeEEEeeC--CC---cEEEEEEecCccccccccccccCCCc
Q 022111 138 GWDTTRIDQAHP-VGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGC--DN---TVKVWKMYNGIWKMDCFPALQMHSDW 211 (302)
Q Consensus 138 ~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~--D~---~v~iwd~~~~~~~~~~~~~~~~h~~~ 211 (302)
. ..+...+. ..+..+.|+|++ +.|+..+. ++ .|++||+.++.. ..+..+.++...
T Consensus 228 ~---~~l~~~~~~~~~~~~~~spdg--------------~~l~~~~~~~~~~~~~l~~~d~~~g~~--~~l~~~~~~~~~ 288 (388)
T 3pe7_A 228 M---RKVKTHAEGESCTHEFWVPDG--------------SALVYVSYLKGSPDRFIYSADPETLEN--RQLTSMPACSHL 288 (388)
T ss_dssp C---EESCCCCTTEEEEEEEECTTS--------------SCEEEEEEETTCCCEEEEEECTTTCCE--EEEEEECCEEEE
T ss_pred e---EEeeeCCCCcccccceECCCC--------------CEEEEEecCCCCCcceEEEEecCCCce--EEEEcCCCceee
Confidence 1 22221221 246788999974 44544332 22 399999877632 112222221110
Q ss_pred ---eeEEEeeCCCCCCccEEEEE---------ecCCeEEEEEeccCCcceeeeeeccCCC-----------cEEEEEEcc
Q 022111 212 ---VRSVAWAPNLGLPKSTIASA---------SQDGTVVIWTCAKEGEQWEGRVLKDFKT-----------PVWSVSWSL 268 (302)
Q Consensus 212 ---v~~v~~~p~~~~~~~~l~s~---------s~D~~i~iwd~~~~~~~~~~~~~~~~~~-----------~v~~~~~sp 268 (302)
...++|+||+ +.|+.. ..+..|.+||+..... ..+..+.. .+.+++|||
T Consensus 289 ~~~~~~~~~spdg----~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~sp 360 (388)
T 3pe7_A 289 MSNYDGSLMVGDG----SDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ----HRVARHDTSWKVFEGDRQVTHPHPSFTP 360 (388)
T ss_dssp EECTTSSEEEEEE----CCC------------CCCCEEEEEETTTTEE----EEEEECCCCCCCBTTBSSTTCCCCEECT
T ss_pred eecCCCCeEccCC----CcceeEeeeccccccCCCCEEEEEeccCCce----EEeccccCcccccccccccCCCCccCCC
Confidence 1123789986 445532 4567899999875321 11222222 467889999
Q ss_pred CCCEEEEecC-C-ceEEeeec
Q 022111 269 TGNLLAVADA-N-NVTLWKEA 287 (302)
Q Consensus 269 dg~~la~~~~-d-~i~~w~~~ 287 (302)
||+.|+.++. + ...||.+.
T Consensus 361 Dg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 361 DDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp TSSEEEEEECTTSSCEEEEEE
T ss_pred CCCEEEEEecCCCceeEEEEE
Confidence 9998887764 3 57777764
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.64 E-value=5.2e-14 Score=133.00 Aligned_cols=244 Identities=12% Similarity=0.044 Sum_probs=147.9
Q ss_pred EEEEc--cCCCE-EEEeeC-CCcEEEEeec--C-CCceEEEEecC-----cccCeEEEEeeCCCCCCEEEEEeCC-----
Q 022111 16 DVAMD--FYGKR-LATASS-DSSIKIIGLS--N-SASQHLATLKG-----HRGPVWQVAWAHPKFGSILASCSYD----- 78 (302)
Q Consensus 16 ~~~~s--~~~~~-l~s~~~-d~~v~lw~~~--~-~~~~~~~~~~~-----h~~~v~~v~~~~~~~~~~l~s~s~D----- 78 (302)
...|+ |||++ |+.++. +..|.++++. . +. ...+.. |...+..++|+|+ |+.|++++.|
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~---~~~l~~~~~~~~~~~~~~~~~spD--g~~l~~~~~~~~~~~ 155 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV---PRPLTPVSAVGGGLRWADPVLLPE--RGEVWCMAEEFTGEG 155 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC---CEECSCCCCSTTCEEEEEEEEETT--TTEEEEEEEEECSSS
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC---CEeccCCccCCCCccccCcEECCC--CCEEEEEEecccCCC
Confidence 45454 99988 765543 4455555543 1 22 234444 6777889999975 8899988877
Q ss_pred -----CeEEEEEcCCC-----CceeEEEEec-CCCCCeeEEEecCCCCCcEEEEEecCC--------cEEEEEecCCCCe
Q 022111 79 -----GQVIIWKEGNQ-----NDWTQAHTFN-DHKSSVNSIAWAPHELGLSLACGSSDG--------NISVFTATADGGW 139 (302)
Q Consensus 79 -----~~i~iwd~~~~-----~~~~~~~~~~-~h~~~i~~l~~~pd~~~~~l~sg~~d~--------~v~~~~~~~~~~~ 139 (302)
.+|.+||+.+. . ....+. .+...+..++|+|| |++|+.++.++ .|.+|++...+..
T Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~SpD--G~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~ 230 (662)
T 3azo_A 156 PSDVRRFLAAVPLDGSAAADRS---AVRELSDDAHRFVTGPRLSPD--GRQAVWLAWDHPRMPWEGTELKTARVTEDGRF 230 (662)
T ss_dssp TTCEEEEEEEEETTSTTTTCGG---GSEESSCSCSSEECCCEECTT--SSEEEEEEECTTCCTTTCEEEEEEEECTTSCE
T ss_pred CCCceeEEEEEECCCCccccCC---ceeEEEecCCCcccCceECCC--CCEEEEEECCCCCCCCCCcEEEEEEECCCCcc
Confidence 58999998761 1 123454 56677888999998 77888777553 7889998732311
Q ss_pred -eeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEe--cCccccccccccccCCCc-----
Q 022111 140 -DTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMY--NGIWKMDCFPALQMHSDW----- 211 (302)
Q Consensus 140 -~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~--~~~~~~~~~~~~~~h~~~----- 211 (302)
....+...|...+..+.|+|++ ++++++..++..+||.+. ++.. . ....++...
T Consensus 231 ~~~~~l~~~~~~~~~~~~~spdg--------------~l~~~~~~~~~~~l~~~~~~~~~~--~--~l~~~~~~~~~p~w 292 (662)
T 3azo_A 231 ADTRTLLGGPEEAIAQAEWAPDG--------------SLIVATDRTGWWNLHRVDPATGAA--T--QLCRREEEFAGPLW 292 (662)
T ss_dssp EEEEEEEEETTBCEEEEEECTTS--------------CEEEEECTTSSCEEEEECTTTCCE--E--ESSCCSSBSSCCCC
T ss_pred cccEEeCCCCCceEcceEECCCC--------------eEEEEECCCCCeEEEEEECCCCce--e--ecccccccccCccc
Confidence 2223333456778899999974 577888888855555543 3321 1 111122221
Q ss_pred ---eeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEE--EEecCC-ceEEee
Q 022111 212 ---VRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLL--AVADAN-NVTLWK 285 (302)
Q Consensus 212 ---v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l--a~~~~d-~i~~w~ 285 (302)
+.+++|+|++ ..+++++. +.++||.++..... ...+..+...+.++ |+++++.+ ++++.+ ...+|.
T Consensus 293 ~~~~~~~~~~~~~----~~~~~~~~-~~~~l~~~d~~~~~--~~~l~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~ 364 (662)
T 3azo_A 293 TPGMRWFAPLANG----LIAVVHGK-GAAVLGILDPESGE--LVDAAGPWTEWAAT-LTVSGTRAVGVAASPRTAYEVVE 364 (662)
T ss_dssp STTCCSEEECTTS----CEEEEEBS-SSCEEEEEETTTTE--EEECCSSCCEEEEE-EEEETTEEEEEEEETTEEEEEEE
T ss_pred cccCceEeEeCCC----EEEEEEEc-CccEEEEEECCCCc--EEEecCCCCeEEEE-EecCCCEEEEEEcCCCCCCEEEE
Confidence 5678888885 67888888 99999966533221 12233444556666 14455433 344444 355555
Q ss_pred ec-CCceEEEe
Q 022111 286 EA-VDGEWQQV 295 (302)
Q Consensus 286 ~~-~~~~~~~~ 295 (302)
.. ..++....
T Consensus 365 ~d~~~g~~~~l 375 (662)
T 3azo_A 365 LDTVTGRARTI 375 (662)
T ss_dssp EETTTCCEEEE
T ss_pred EECCCCceEEe
Confidence 42 23444433
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.64 E-value=2e-14 Score=135.78 Aligned_cols=256 Identities=11% Similarity=0.062 Sum_probs=160.6
Q ss_pred ccccccceeEEEEccCCCEEEEe--eCCCcEEEEeecCCCceEEEEecCcccCeE---------EEEeeC-CCCCCE-EE
Q 022111 7 ETGHEDTVHDVAMDFYGKRLATA--SSDSSIKIIGLSNSASQHLATLKGHRGPVW---------QVAWAH-PKFGSI-LA 73 (302)
Q Consensus 7 ~~~h~~~v~~~~~s~~~~~l~s~--~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~---------~v~~~~-~~~~~~-l~ 73 (302)
+.+|...+..++|+++.-++++. +.++..+||..... . ....+..|...+. ..+|+. | +|++ |+
T Consensus 19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~-~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~SP-Dg~~~la 95 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRAD-G-AEESALPAPWNVRNRVFEYSGFPWAGVPRP-AGGPLLV 95 (662)
T ss_dssp HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTT-S-CEEESSCTTCCBCCCGGGTCCCCEEEECCS-SSSCEEE
T ss_pred HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCC-C-CcceeCCCCccccccccccCCccceeeeec-CCCeEEE
Confidence 45788899999999877677776 56889999986332 2 2455666766666 566762 3 3676 66
Q ss_pred EEeC-CCeEEEEEcC--C-CCceeEEEEecC-----CCCCeeEEEecCCCCCcEEEEEecC----------CcEEEEEec
Q 022111 74 SCSY-DGQVIIWKEG--N-QNDWTQAHTFND-----HKSSVNSIAWAPHELGLSLACGSSD----------GNISVFTAT 134 (302)
Q Consensus 74 s~s~-D~~i~iwd~~--~-~~~~~~~~~~~~-----h~~~i~~l~~~pd~~~~~l~sg~~d----------~~v~~~~~~ 134 (302)
..+. +..|.++++. . + ....+.. |...+..++|+|| |+.|++++.+ ..|.+|++.
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~----~~~~l~~~~~~~~~~~~~~~~~spD--g~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 169 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGA----VPRPLTPVSAVGGGLRWADPVLLPE--RGEVWCMAEEFTGEGPSDVRRFLAAVPLD 169 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCC----CCEECSCCCCSTTCEEEEEEEEETT--TTEEEEEEEEECSSSTTCEEEEEEEEETT
T ss_pred EEECCCCeEEEEcCCCCCCC----CCEeccCCccCCCCccccCcEECCC--CCEEEEEEecccCCCCCCceeEEEEEECC
Confidence 5543 4555555543 1 2 1234444 6678899999998 6788888876 578888876
Q ss_pred CC-----CCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCC--------CcEEEEEEe-cCccccc
Q 022111 135 AD-----GGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD--------NTVKVWKMY-NGIWKMD 200 (302)
Q Consensus 135 ~~-----~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D--------~~v~iwd~~-~~~~~~~ 200 (302)
.. +.. ..+...+...+..+.|+|++ +.|+.++.+ ..|++||+. ++... .
T Consensus 170 ~~~~~~~~~~--~~l~~~~~~~~~~~~~SpDG--------------~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~-~ 232 (662)
T 3azo_A 170 GSAAADRSAV--RELSDDAHRFVTGPRLSPDG--------------RQAVWLAWDHPRMPWEGTELKTARVTEDGRFA-D 232 (662)
T ss_dssp STTTTCGGGS--EESSCSCSSEECCCEECTTS--------------SEEEEEEECTTCCTTTCEEEEEEEECTTSCEE-E
T ss_pred CCccccCCce--eEEEecCCCcccCceECCCC--------------CEEEEEECCCCCCCCCCcEEEEEEECCCCccc-c
Confidence 41 221 22210234456778899864 677777654 379999998 44110 1
Q ss_pred cccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCC---Cc-----EEEEEEccCCCE
Q 022111 201 CFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFK---TP-----VWSVSWSLTGNL 272 (302)
Q Consensus 201 ~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~---~~-----v~~~~~spdg~~ 272 (302)
......+|...+.+++|+||+ +.+++++.|+..+||.++....... .+..... .+ +.+++|+|++++
T Consensus 233 ~~~l~~~~~~~~~~~~~spdg----~l~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~~~~~~p~w~~~~~~~~~~~~~~~ 307 (662)
T 3azo_A 233 TRTLLGGPEEAIAQAEWAPDG----SLIVATDRTGWWNLHRVDPATGAAT-QLCRREEEFAGPLWTPGMRWFAPLANGLI 307 (662)
T ss_dssp EEEEEEETTBCEEEEEECTTS----CEEEEECTTSSCEEEEECTTTCCEE-ESSCCSSBSSCCCCSTTCCSEEECTTSCE
T ss_pred cEEeCCCCCceEcceEECCCC----eEEEEECCCCCeEEEEEECCCCcee-ecccccccccCccccccCceEeEeCCCEE
Confidence 111223457789999999996 5788888888555555432111111 1111111 11 457899999999
Q ss_pred EEEecCCceEEeeecC-CceEE
Q 022111 273 LAVADANNVTLWKEAV-DGEWQ 293 (302)
Q Consensus 273 la~~~~d~i~~w~~~~-~~~~~ 293 (302)
++++....++||.... .+...
T Consensus 308 ~~~~~~~~~~l~~~d~~~~~~~ 329 (662)
T 3azo_A 308 AVVHGKGAAVLGILDPESGELV 329 (662)
T ss_dssp EEEEBSSSCEEEEEETTTTEEE
T ss_pred EEEEEcCccEEEEEECCCCcEE
Confidence 9888765588886543 24443
No 169
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.63 E-value=4.2e-13 Score=114.13 Aligned_cols=241 Identities=13% Similarity=0.022 Sum_probs=154.7
Q ss_pred ccccceeEEEEccCCC-EEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcC
Q 022111 9 GHEDTVHDVAMDFYGK-RLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEG 87 (302)
Q Consensus 9 ~h~~~v~~~~~s~~~~-~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~ 87 (302)
.+.....+++|+++++ .++++..++.|++|+.... ...+..+...+.+++++++ |+++++...++.|.+||..
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l~~~~d--g~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ----LSPEMHPSHHQNGHCLNKQ--GHLIACSHGLRRLERQREP 98 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC----EEEEESSCSSEEEEEECTT--CCEEEEETTTTEEEEECST
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC----eEEEECCCCCcceeeECCC--CcEEEEecCCCeEEEEcCC
Confidence 3445667899999998 7778888999999998653 3445556777899999763 7888777778899999986
Q ss_pred CCCceeEEE-EecC-CCCCeeEEEecCCCCCcEEEE----EecC-----------CcEEEEEecCCCCeeeeeecccCCC
Q 022111 88 NQNDWTQAH-TFND-HKSSVNSIAWAPHELGLSLAC----GSSD-----------GNISVFTATADGGWDTTRIDQAHPV 150 (302)
Q Consensus 88 ~~~~~~~~~-~~~~-h~~~i~~l~~~pd~~~~~l~s----g~~d-----------~~v~~~~~~~~~~~~~~~~~~~h~~ 150 (302)
++.. .... .... ....+..+++.|+ |.++++ |..+ +.-.||.+...+... .+. .+..
T Consensus 99 ~g~~-~~~~~~~~~~~~~~~~~i~~d~~--G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~--~~~-~~~~ 172 (296)
T 3e5z_A 99 GGEW-ESIADSFEGKKLNSPNDVCLAPD--GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLS--API-RDRV 172 (296)
T ss_dssp TCCE-EEEECEETTEECCCCCCEEECTT--SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEE--EEE-CCCS
T ss_pred CCcE-EEEeeccCCCCCCCCCCEEECCC--CCEEEECCccccccccccccccccCCCcEEEEECCCCCEE--Eee-cCCC
Confidence 5432 1111 1111 1235678999987 667776 3311 122455554333322 221 3444
Q ss_pred CeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEe-cCccccccccccccCCCceeEEEeeCCCCCCccEEE
Q 022111 151 GVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMY-NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIA 229 (302)
Q Consensus 151 ~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~-~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~ 229 (302)
....++|+|++ +.|++.+.++.|++||+. ++... .....+..+...+.+++++|++ +..+
T Consensus 173 ~~~gi~~s~dg--------------~~lv~~~~~~~i~~~~~~~~g~~~-~~~~~~~~~~~~p~~i~~d~~G----~l~v 233 (296)
T 3e5z_A 173 KPNGLAFLPSG--------------NLLVSDTGDNATHRYCLNARGETE-YQGVHFTVEPGKTDGLRVDAGG----LIWA 233 (296)
T ss_dssp SEEEEEECTTS--------------CEEEEETTTTEEEEEEECSSSCEE-EEEEEECCSSSCCCSEEEBTTS----CEEE
T ss_pred CCccEEECCCC--------------CEEEEeCCCCeEEEEEECCCCcCc-CCCeEeeCCCCCCCeEEECCCC----CEEE
Confidence 56788998864 566778888999999996 33210 0011222345567789999985 5555
Q ss_pred EEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEE-ccCCCEEEEecCCceEEeeec
Q 022111 230 SASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSW-SLTGNLLAVADANNVTLWKEA 287 (302)
Q Consensus 230 s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-spdg~~la~~~~d~i~~w~~~ 287 (302)
+. ++.|.+||.+.. .... ...... +.+++| +|+++.|.+++.+++..++..
T Consensus 234 ~~--~~~v~~~~~~g~---~~~~-~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~ 285 (296)
T 3e5z_A 234 SA--GDGVHVLTPDGD---ELGR-VLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIETN 285 (296)
T ss_dssp EE--TTEEEEECTTSC---EEEE-EECSSC-CCEEEEESTTSCEEEEEETTEEEEEECS
T ss_pred Ec--CCeEEEECCCCC---EEEE-EECCCC-ceeEEEECCCCCEEEEEcCCeEEEEEcc
Confidence 55 889999997521 1112 222333 888999 589998888877776666654
No 170
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.61 E-value=1.8e-13 Score=131.21 Aligned_cols=244 Identities=15% Similarity=0.208 Sum_probs=145.6
Q ss_pred eEEEEccCCCEEEEeeCC---------CcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 15 HDVAMDFYGKRLATASSD---------SSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 15 ~~~~~s~~~~~l~s~~~d---------~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
.++.|||||++|+.++.+ +.+.+||+.++. ...+..|.+.+...+|+|+ |+.||.++ |+.|.+|+
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~---~~~l~~~~~~~~~~~~SPd--G~~la~~~-~~~i~~~~ 138 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ---LITEERIPNNTQWVTWSPV--GHKLAYVW-NNDIYVKI 138 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE---ECCSSCCCTTEEEEEECSS--TTCEEEEE-TTEEEEES
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc---EEEcccCCCcceeeEECCC--CCEEEEEE-CCeEEEEE
Confidence 447889999999998876 456699987642 3356678888999999975 88998874 68999999
Q ss_pred cCCCCceeEEEEecCCCCCe-----------------eEEEecCCCCCcEEEEEecCC----------------------
Q 022111 86 EGNQNDWTQAHTFNDHKSSV-----------------NSIAWAPHELGLSLACGSSDG---------------------- 126 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~i-----------------~~l~~~pd~~~~~l~sg~~d~---------------------- 126 (302)
..++... . -+..++...+ ..+.|||| |+.||.++.|.
T Consensus 139 ~~~~~~~-~-lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpD--g~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~ 214 (740)
T 4a5s_A 139 EPNLPSY-R-ITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPN--GTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTV 214 (740)
T ss_dssp STTSCCE-E-CCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTT--SSEEEEEEEECTTCCEEEEEECCSTTCSSCEEE
T ss_pred CCCCceE-E-EcCCCCccceecCcccccccchhcCCCcceEECCC--CCEEEEEEEcccCCceEEEEeecCCCCCCCcce
Confidence 8765321 1 1222332222 45899999 77888876443
Q ss_pred --------------cEEEEEecC---CCCeeeeeecc-----cCCCCeEEEEeCCCCCCCceeecccCCCceeEEEe---
Q 022111 127 --------------NISVFTATA---DGGWDTTRIDQ-----AHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASC--- 181 (302)
Q Consensus 127 --------------~v~~~~~~~---~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~--- 181 (302)
.+.+||+.. ........+.. .|...+..++|+|++ +.++..
T Consensus 215 ~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg--------------~~~~~~~~r 280 (740)
T 4a5s_A 215 RVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQE--------------RISLQWLRR 280 (740)
T ss_dssp EEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETT--------------EEEEEEEES
T ss_pred eecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCC--------------eEEEEEeCC
Confidence 245555543 21101112211 245557788888864 544443
Q ss_pred -eCCCcEEEEEEecCccccccc--ccc--ccCCCcee-----EEEeeCCCCCCccEEE-EEe-cCC--eEEEEEeccCCc
Q 022111 182 -GCDNTVKVWKMYNGIWKMDCF--PAL--QMHSDWVR-----SVAWAPNLGLPKSTIA-SAS-QDG--TVVIWTCAKEGE 247 (302)
Q Consensus 182 -~~D~~v~iwd~~~~~~~~~~~--~~~--~~h~~~v~-----~v~~~p~~~~~~~~l~-s~s-~D~--~i~iwd~~~~~~ 247 (302)
+.+..|++||+.++.....|. ..+ .+|..+|. +..|+||+ +.|+ ..+ .+| .|.+||......
T Consensus 281 ~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG----~~l~~~~s~~~G~~~l~~~~~~~~~~ 356 (740)
T 4a5s_A 281 IQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDG----NSFYKIISNEEGYRHICYFQIDKKDC 356 (740)
T ss_dssp STTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTS----SEEEEEEECTTSCEEEEEEETTCSSC
T ss_pred CCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCC----CEEEEEEEcCCCceEEEEEECCCCce
Confidence 234479999998864100011 122 45777776 78999996 5555 555 444 467777654321
Q ss_pred ceeeeeeccCCCcEEEEEEccCCCEEE-EecC--C---ceEEeeecCCce
Q 022111 248 QWEGRVLKDFKTPVWSVSWSLTGNLLA-VADA--N---NVTLWKEAVDGE 291 (302)
Q Consensus 248 ~~~~~~~~~~~~~v~~~~~spdg~~la-~~~~--d---~i~~w~~~~~~~ 291 (302)
..+......+..+.+ +|++.|+ ++.. + ..+||.+..++.
T Consensus 357 ----~~lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~ 401 (740)
T 4a5s_A 357 ----TFITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLIDY 401 (740)
T ss_dssp ----EESCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTEE
T ss_pred ----EecccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCCC
Confidence 122222334544432 4465554 4443 1 467887765543
No 171
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.60 E-value=1.7e-12 Score=123.89 Aligned_cols=252 Identities=11% Similarity=-0.006 Sum_probs=152.2
Q ss_pred cccccceeEEEEccCCCEEEEeeCCC-----cEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCe--
Q 022111 8 TGHEDTVHDVAMDFYGKRLATASSDS-----SIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQ-- 80 (302)
Q Consensus 8 ~~h~~~v~~~~~s~~~~~l~s~~~d~-----~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~-- 80 (302)
.+|...+..++|||||++||.+..++ +|++||+.++. ...... ....+..++|+++ |+.|+.++.++.
T Consensus 121 ~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~--~~~~~~-~~~~~~~~~wspD--g~~l~~~~~~~~~~ 195 (710)
T 2xdw_A 121 DDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK--ELPDVL-ERVKFSCMAWTHD--GKGMFYNAYPQQDG 195 (710)
T ss_dssp TTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE--EEEEEE-EEECSCCEEECTT--SSEEEEEECCCCSS
T ss_pred cCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC--CCcccc-cCcccceEEEEeC--CCEEEEEEECCccc
Confidence 34555788999999999998766543 89999987643 222111 2223667999874 888888888766
Q ss_pred --------------EEEEEcCCCCce-eEEEEecCCCCCeeEEEecCCCCCcEEEEEec-----CCcEEEEEecCC----
Q 022111 81 --------------VIIWKEGNQNDW-TQAHTFNDHKSSVNSIAWAPHELGLSLACGSS-----DGNISVFTATAD---- 136 (302)
Q Consensus 81 --------------i~iwd~~~~~~~-~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~-----d~~v~~~~~~~~---- 136 (302)
|.+|++.+.... ..+.....|...+..+.|+|| |.+|+..+. +..|.+||+...
T Consensus 196 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 273 (710)
T 2xdw_A 196 KSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDD--GRYVLLSIREGCDPVNRLWYCDLQQESNGI 273 (710)
T ss_dssp CCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTT--SCEEEEEEECSSSSCCEEEEEEGGGSSSSS
T ss_pred cccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCC--CCEEEEEEEccCCCccEEEEEECccccccc
Confidence 999998664321 122233335566789999998 667776654 568889988641
Q ss_pred -CCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCC---CcEEEEEEecCccccccccccccCCC--
Q 022111 137 -GGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD---NTVKVWKMYNGIWKMDCFPALQMHSD-- 210 (302)
Q Consensus 137 -~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D---~~v~iwd~~~~~~~~~~~~~~~~h~~-- 210 (302)
+......+. .+...+.. .|+|++ ..+++.+..+ ..|.+||+.++.. .....+..|..
T Consensus 274 ~~~~~~~~l~-~~~~~~~~-~~s~dg-------------~~l~~~s~~~~~~~~l~~~d~~~~~~--~~~~~l~~~~~~~ 336 (710)
T 2xdw_A 274 TGILKWVKLI-DNFEGEYD-YVTNEG-------------TVFTFKTNRHSPNYRLINIDFTDPEE--SKWKVLVPEHEKD 336 (710)
T ss_dssp CSSCCCEEEE-CSSSSCEE-EEEEET-------------TEEEEEECTTCTTCEEEEEETTSCCG--GGCEEEECCCSSC
T ss_pred CCccceEEee-CCCCcEEE-EEeccC-------------CEEEEEECCCCCCCEEEEEeCCCCCc--ccceeccCCCCCC
Confidence 111112222 33333333 365543 2333333332 3588888866421 11233444543
Q ss_pred ceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEe-cC---C-ceEEee
Q 022111 211 WVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVA-DA---N-NVTLWK 285 (302)
Q Consensus 211 ~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~-~~---d-~i~~w~ 285 (302)
.+.+++|++++ ..+++...|+..+||-++....... ..+......+.+++++|+++.|+.. ++ . .+.+|+
T Consensus 337 ~~~~~~~~~~~----~lv~~~~~~g~~~l~~~~~~~g~~~-~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d 411 (710)
T 2xdw_A 337 VLEWVACVRSN----FLVLCYLHDVKNTLQLHDLATGALL-KIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCD 411 (710)
T ss_dssp EEEEEEEETTT----EEEEEEEETTEEEEEEEETTTCCEE-EEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEE
T ss_pred eEEEEEEEcCC----EEEEEEEECCEEEEEEEECCCCCEE-EecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEE
Confidence 68889999653 6788899999655554432111111 1223335668899999999766544 22 1 588888
Q ss_pred ecC
Q 022111 286 EAV 288 (302)
Q Consensus 286 ~~~ 288 (302)
...
T Consensus 412 ~~t 414 (710)
T 2xdw_A 412 LTK 414 (710)
T ss_dssp TTS
T ss_pred CCC
Confidence 754
No 172
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.60 E-value=6.7e-14 Score=121.10 Aligned_cols=210 Identities=8% Similarity=-0.021 Sum_probs=127.1
Q ss_pred ceeEEEEccCCCEEE-EeeCCCcEEEEeecCCCceEEEEec-Cc-----ccCeEEEEeeCCCCCCEEEEEeCC-------
Q 022111 13 TVHDVAMDFYGKRLA-TASSDSSIKIIGLSNSASQHLATLK-GH-----RGPVWQVAWAHPKFGSILASCSYD------- 78 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~-s~~~d~~v~lw~~~~~~~~~~~~~~-~h-----~~~v~~v~~~~~~~~~~l~s~s~D------- 78 (302)
.+..++|+|++++++ ++..++.|.+||+... +.+..+. .+ ...+..++|+++ |++|++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~--~~~~~~~~~~~~~~~~~~~~~~~~spd--g~~l~~~~~~~~~~~~~ 119 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC--KNTFHANLSSVPGEVGRSMYSFAISPD--GKEVYATVNPTQRLNDH 119 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTT--EEEEEEESCCSTTEEEECSSCEEECTT--SSEEEEEEEEEEECSSC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCC--cEEEEEEcccccccccccccceEECCC--CCEEEEEcccccccccc
Confidence 567889999998654 5557899999998653 3344443 22 234778999864 8888888865
Q ss_pred -----CeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccC---C-
Q 022111 79 -----GQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAH---P- 149 (302)
Q Consensus 79 -----~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h---~- 149 (302)
+.|.+||+.++........+. +...+.+++|+|+ +. ++.++ +.|.+||..+..... .+.... .
T Consensus 120 ~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~d--g~-l~~~~--~~i~~~d~~~~~~~~--~~~~~~~~~~~ 191 (349)
T 1jmx_B 120 YVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADD--GS-LYVAG--PDIYKMDVKTGKYTV--ALPLRNWNRKG 191 (349)
T ss_dssp EEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTT--SC-EEEES--SSEEEECTTTCCEEE--EECSTTCCCTT
T ss_pred cccCCCeEEEEECCCccccceeeecc-CCCcccceeECCC--Cc-EEEcc--CcEEEEeCCCCceec--cccccccCCcc
Confidence 899999987643222233333 3346889999998 55 44443 349999876432211 111110 0
Q ss_pred ---------------C----CeEEEEeCCCCCC------------------------------CceeecccCC-CceeEE
Q 022111 150 ---------------V----GVTSVSWAPAMAP------------------------------GALVGLGLLD-PVQKLA 179 (302)
Q Consensus 150 ---------------~----~v~~~~~~~~~~~------------------------------~~~~~~~~~~-~~~~l~ 179 (302)
. ....+.++++... .....+...+ ++++++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~ 271 (349)
T 1jmx_B 192 YSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIY 271 (349)
T ss_dssp BCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEE
T ss_pred ccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEE
Confidence 0 1122333321100 0011122234 566777
Q ss_pred EeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccC
Q 022111 180 SCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKE 245 (302)
Q Consensus 180 s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~ 245 (302)
++ ++.|.+||+.++. ....+. ....+.+++|+|++ +.|++++.++.|++||+.+.
T Consensus 272 ~~--~~~v~~~d~~~~~----~~~~~~-~~~~~~~~~~s~dg----~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 272 GV--LNRLAKYDLKQRK----LIKAAN-LDHTYYCVAFDKKG----DKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp EE--ESEEEEEETTTTE----EEEEEE-CSSCCCEEEECSSS----SCEEEESBSSEEEEEETTTT
T ss_pred EE--cCeEEEEECccCe----EEEEEc-CCCCccceEECCCC----CEEEEecCCCeEEEEecccc
Confidence 66 8899999987753 222222 23347799999996 55777888999999998653
No 173
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.58 E-value=3.8e-12 Score=110.35 Aligned_cols=228 Identities=12% Similarity=0.155 Sum_probs=140.4
Q ss_pred ceeEEEEccCCCEEEEeeCC---Cc--EEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCC---------
Q 022111 13 TVHDVAMDFYGKRLATASSD---SS--IKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYD--------- 78 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~~~d---~~--v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D--------- 78 (302)
.+..++|+|||++||..+.+ +. |.+|++..+ +.. .+..+.. +..++|+|+ |+.|+.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g--~~~-~l~~~~~-~~~~~wspd--g~~l~~~~~~~~~~~~~~~ 133 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETL--SSK-KILEAKN-IRSLEWNED--SRKLLIVGFKRREDEDFIF 133 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTT--EEE-EEEEESE-EEEEEECTT--SSEEEEEEECCCC------
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCC--ceE-EEEcCCC-ccceeECCC--CCEEEEEEccCCCcCCcEE
Confidence 46678999999999887754 34 555565442 322 2323334 889999874 7888777643
Q ss_pred ------------------CeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCC-------cEEEEEe
Q 022111 79 ------------------GQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDG-------NISVFTA 133 (302)
Q Consensus 79 ------------------~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~-------~v~~~~~ 133 (302)
..|.+||+.++. ....+.. . .+..++|+|| | +++++..+. ...||.+
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~---~~~~l~~-~-~~~~~~~spd--g-~~~~~~~~~~~~~~~~~~~l~~~ 205 (347)
T 2gop_A 134 EDDVPAWFDDLGFFDGEKTTFWIFDTESEE---VIEEFEK-P-RFSSGIWHRD--K-IVVNVPHREIIPQYFKFWDIYIW 205 (347)
T ss_dssp ---CCCC---------CEEEEEEEETTTTE---EEEEEEE-E-TTCEEEEETT--E-EEEEEECCCSSCCSSCCEEEEEE
T ss_pred EcccceeecCcccccCccceEEEEECCCCe---EEeeecC-C-CcccccCCCC--e-EEEEEecccccccccccccEEEe
Confidence 568888886642 2133333 3 7889999998 6 666665542 4566655
Q ss_pred cCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCC--------CcEEEEEEecCcccccccccc
Q 022111 134 TADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD--------NTVKVWKMYNGIWKMDCFPAL 205 (302)
Q Consensus 134 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D--------~~v~iwd~~~~~~~~~~~~~~ 205 (302)
. .+.. ..+. .+ ..+..+ +|+ ++.|+.++.+ ..|.+|| ++. .....
T Consensus 206 d-~~~~--~~l~-~~-~~~~~~--spd--------------g~~l~~~~~~~~~~~~~~~~l~~~d--~~~----~~~l~ 258 (347)
T 2gop_A 206 E-DGKE--EKMF-EK-VSFYAV--DSD--------------GERILLYGKPEKKYMSEHNKLYIYD--GKE----VMGIL 258 (347)
T ss_dssp E-TTEE--EEEE-EE-ESEEEE--EEC--------------SSCEEEEECCSSSCCCSSCEEEEEC--SSC----EEESS
T ss_pred C-CCce--EEec-cC-cceeeE--CCC--------------CCEEEEEEccccCCccccceEEEEC--CCc----eEecc
Confidence 5 3322 2222 12 233333 554 4666666543 3577777 332 11223
Q ss_pred ccCCCceeE-EEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-c-eE
Q 022111 206 QMHSDWVRS-VAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-N-VT 282 (302)
Q Consensus 206 ~~h~~~v~~-v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~-i~ 282 (302)
.+|...+.. +.|+ + + .+++++.++.++|| +. .+.. ..+ ......|.+++|+| .++++++++ . ..
T Consensus 259 ~~~~~~~~~~~~~s-d----g-~~~~~~~~~~~~l~-~~-~g~~--~~~-~~~~~~v~~~~~s~--~~~~~~~~~~~~~~ 325 (347)
T 2gop_A 259 DEVDRGVGQAKIKD-G----K-VYFTLFEEGSVNLY-IW-DGEI--KPI-AKGRHWIMGFDVDE--IVVYLKETATRLRE 325 (347)
T ss_dssp TTCCSEEEEEEEET-T----E-EEEEEEETTEEEEE-EE-SSSE--EEE-ECSSSEEEEEEESS--SEEEEEECSSSCCE
T ss_pred ccCCcccCCccEEc-C----c-EEEEEecCCcEEEE-Ec-CCce--EEE-ecCCCeEEeeeeeC--cEEEEEcCCCChHH
Confidence 456777886 8998 6 4 78899999999999 87 3221 122 23356799999999 566666555 4 47
Q ss_pred EeeecCCceEEEee
Q 022111 283 LWKEAVDGEWQQVS 296 (302)
Q Consensus 283 ~w~~~~~~~~~~~~ 296 (302)
||... |...++.
T Consensus 326 l~~~~--g~~~~lt 337 (347)
T 2gop_A 326 LFTWD--GEEKQLT 337 (347)
T ss_dssp EEEES--SSEEECC
T ss_pred heEeC--CcEEEec
Confidence 88765 5554443
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.56 E-value=2.2e-11 Score=105.06 Aligned_cols=240 Identities=10% Similarity=0.025 Sum_probs=146.7
Q ss_pred ccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCC----CeEEEE
Q 022111 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYD----GQVIIW 84 (302)
Q Consensus 9 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D----~~i~iw 84 (302)
++...+.+++|++++++++++..++.|++|+........ ....+...+.+++++++ ++++++...+ +.|.+|
T Consensus 42 ~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~--~~~~~~~~~~~i~~~~d--g~l~v~~~~~~~~~~~i~~~ 117 (333)
T 2dg1_A 42 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR--PFVSHKANPAAIKIHKD--GRLFVCYLGDFKSTGGIFAA 117 (333)
T ss_dssp SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE--EEECSSSSEEEEEECTT--SCEEEEECTTSSSCCEEEEE
T ss_pred ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE--EeeCCCCCcceEEECCC--CcEEEEeCCCCCCCceEEEE
Confidence 455567889999999988888889999999986543222 22245677999999754 7777777666 689999
Q ss_pred EcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecC----CcEEEEEecCCC-CeeeeeecccCCCCeEEEEeCC
Q 022111 85 KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD----GNISVFTATADG-GWDTTRIDQAHPVGVTSVSWAP 159 (302)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d----~~v~~~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~ 159 (302)
|..+... ........+...+.++++.|+ +.++++...+ ....||.+...+ ... .+. .+......++|+|
T Consensus 118 d~~~~~~-~~~~~~~~~~~~~~~i~~d~~--g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~--~~~-~~~~~~~~i~~~~ 191 (333)
T 2dg1_A 118 TENGDNL-QDIIEDLSTAYCIDDMVFDSK--GGFYFTDFRGYSTNPLGGVYYVSPDFRTVT--PII-QNISVANGIALST 191 (333)
T ss_dssp CTTSCSC-EEEECSSSSCCCEEEEEECTT--SCEEEEECCCBTTBCCEEEEEECTTSCCEE--EEE-EEESSEEEEEECT
T ss_pred eCCCCEE-EEEEccCccCCcccceEECCC--CCEEEEeccccccCCCceEEEEeCCCCEEE--Eee-cCCCcccceEECC
Confidence 9866432 111111124467899999997 5566654431 234555544322 222 111 1223467788887
Q ss_pred CCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccc-----cccccccCCCceeEEEeeCCCCCCccEEEEEecC
Q 022111 160 AMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMD-----CFPALQMHSDWVRSVAWAPNLGLPKSTIASASQD 234 (302)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~-----~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D 234 (302)
++ ..++++.+.++.|.+||+.+....+. ....+.++ ..+..+++++++ +.+++...+
T Consensus 192 dg-------------~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G----~l~v~~~~~ 253 (333)
T 2dg1_A 192 DE-------------KVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDD----NLYVAMYGQ 253 (333)
T ss_dssp TS-------------SEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTC----CEEEEEETT
T ss_pred CC-------------CEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCC----CEEEEEcCC
Confidence 63 12455666688999999963211111 01112223 467889999985 667777788
Q ss_pred CeEEEEEeccCCcceeeeeecc-----CCCcEEEEEEccCCCEEEEecCC
Q 022111 235 GTVVIWTCAKEGEQWEGRVLKD-----FKTPVWSVSWSLTGNLLAVADAN 279 (302)
Q Consensus 235 ~~i~iwd~~~~~~~~~~~~~~~-----~~~~v~~~~~spdg~~la~~~~d 279 (302)
+.|.+||.... . ...+... +...+.+++|+|||+.|.+++.+
T Consensus 254 ~~v~~~d~~g~--~-~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 254 GRVLVFNKRGY--P-IGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp TEEEEECTTSC--E-EEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CEEEEECCCCC--E-EEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 99999987421 1 1122111 11157899999998777555443
No 175
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.56 E-value=1.4e-12 Score=124.27 Aligned_cols=255 Identities=10% Similarity=-0.019 Sum_probs=154.3
Q ss_pred cccccceeEEEEccCCCEEE-----EeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCe--
Q 022111 8 TGHEDTVHDVAMDFYGKRLA-----TASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQ-- 80 (302)
Q Consensus 8 ~~h~~~v~~~~~s~~~~~l~-----s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~-- 80 (302)
.+|...+..++|||||++|| +|+.+.+|++||+.++.......+... ....++|+++ |+.|+.++.|..
T Consensus 117 ~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~--~~~~~~wspD--g~~l~~~~~d~~~~ 192 (695)
T 2bkl_A 117 KDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGG--KYATPKWTPD--SKGFYYEWLPTDPS 192 (695)
T ss_dssp SSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCC--TTCCCEECTT--SSEEEEEECCCCTT
T ss_pred cCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcc--cccceEEecC--CCEEEEEEecCCCC
Confidence 35666789999999999998 566678999999976432101112211 1257899874 889999988876
Q ss_pred -----------EEEEEcCCCCc-eeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCC--cEEEEEecC-CCCeeeeeec
Q 022111 81 -----------VIIWKEGNQND-WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDG--NISVFTATA-DGGWDTTRID 145 (302)
Q Consensus 81 -----------i~iwd~~~~~~-~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~--~v~~~~~~~-~~~~~~~~~~ 145 (302)
|.+|++.+... ...+.....|...+..+.|+|| |.+|+..+.++ ...+|-+.. .+.+ ..+.
T Consensus 193 ~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpD--G~~l~~~~~~~~~~~~l~~~~~~~~~~--~~l~ 268 (695)
T 2bkl_A 193 IKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRD--GKYLFVYILRGWSENDVYWKRPGEKDF--RLLV 268 (695)
T ss_dssp SCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTT--SCCEEEEEEETTTEEEEEEECTTCSSC--EEEE
T ss_pred CccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCC--CCEEEEEEeCCCCceEEEEEcCCCCce--EEee
Confidence 99999876532 1233334445567889999998 56676666554 344443332 2222 2222
Q ss_pred ccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEee---CCCcEEEEEEecCccccccccccccC--CCceeEEEeeCC
Q 022111 146 QAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCG---CDNTVKVWKMYNGIWKMDCFPALQMH--SDWVRSVAWAPN 220 (302)
Q Consensus 146 ~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~---~D~~v~iwd~~~~~~~~~~~~~~~~h--~~~v~~v~~~p~ 220 (302)
.+...+....| ++ +.++++.. .++.|.+||+.++.. .....+..| ...+.+++|+ +
T Consensus 269 -~~~~~~~~~~~-~~--------------g~l~~~s~~~~~~~~l~~~d~~~~~~--~~~~~l~~~~~~~~l~~~~~~-~ 329 (695)
T 2bkl_A 269 -KGVGAKYEVHA-WK--------------DRFYVLTDEGAPRQRVFEVDPAKPAR--ASWKEIVPEDSSASLLSVSIV-G 329 (695)
T ss_dssp -ECSSCCEEEEE-ET--------------TEEEEEECTTCTTCEEEEEBTTBCSG--GGCEEEECCCSSCEEEEEEEE-T
T ss_pred -cCCCceEEEEe-cC--------------CcEEEEECCCCCCCEEEEEeCCCCCc--cCCeEEecCCCCCeEEEEEEE-C
Confidence 23334444445 33 24444443 357888999865421 001222223 4568888888 3
Q ss_pred CCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecC----C-ceEEeeecCCceEEEe
Q 022111 221 LGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADA----N-NVTLWKEAVDGEWQQV 295 (302)
Q Consensus 221 ~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~----d-~i~~w~~~~~~~~~~~ 295 (302)
+..+++...|+..+||.+...+.. ...+.......+.+++++|+++.|+.... . .|.+|+... +.....
T Consensus 330 ----~~lv~~~~~dg~~~l~~~~~~g~~-~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~-g~~~~l 403 (695)
T 2bkl_A 330 ----GHLSLEYLKDATSEVRVATLKGKP-VRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVST-GKSELW 403 (695)
T ss_dssp ----TEEEEEEEETTEEEEEEEETTCCE-EEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTT-CCEEEE
T ss_pred ----CEEEEEEEECCEEEEEEEeCCCCe-eEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC-CcEEEE
Confidence 368999999999999987632211 11121122456778899999987764422 2 588898753 334433
No 176
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.53 E-value=6.5e-14 Score=123.42 Aligned_cols=231 Identities=8% Similarity=0.011 Sum_probs=136.9
Q ss_pred EEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEE---E----------------EeeCCCCCCEEEEE-
Q 022111 16 DVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQ---V----------------AWAHPKFGSILASC- 75 (302)
Q Consensus 16 ~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~---v----------------~~~~~~~~~~l~s~- 75 (302)
.+.|+|||++|+.++.++.|++|++.......+.. .+...... + .|++ +++.++.+
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~--~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp--dg~~~~~~~ 160 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYT--VDEEWKGYGTWVANSDCTKLVGIEILKRDWQP--LTSWEKFAE 160 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE--CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC--CCSHHHHHH
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEe--cccccCCCCCEEEeccCCccccccccccccCC--CCcceeeee
Confidence 36799999999999999999999986544333322 22221111 2 2333 24544433
Q ss_pred ----eCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecC-CCCCcEEEEEecC------CcEEEEEecCCCCeeeeee
Q 022111 76 ----SYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP-HELGLSLACGSSD------GNISVFTATADGGWDTTRI 144 (302)
Q Consensus 76 ----s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~p-d~~~~~l~sg~~d------~~v~~~~~~~~~~~~~~~~ 144 (302)
..+..|.+||+.++.. ..+..+...+..+.|+| + +..|+..+.+ ..|.+|+..... . ..+
T Consensus 161 ~~~~~~~~~l~~~d~~~g~~----~~~~~~~~~~~~~~~sp~d--g~~l~~~~~~~~~~~~~~l~~~d~~~~~-~--~~l 231 (396)
T 3c5m_A 161 FYHTNPTCRLIKVDIETGEL----EVIHQDTAWLGHPIYRPFD--DSTVGFCHEGPHDLVDARMWLVNEDGSN-V--RKI 231 (396)
T ss_dssp HHHTCCCEEEEEEETTTCCE----EEEEEESSCEEEEEEETTE--EEEEEEEECSCSSSCSCCCEEEETTSCC-C--EES
T ss_pred eccCCCcceEEEEECCCCcE----EeeccCCcccccceECCCC--CCEEEEEecCCCCCCCceEEEEECCCCc-e--eEe
Confidence 4566899999876532 22224567789999999 5 4556655543 356677654321 1 122
Q ss_pred cccC-CCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCC-----CcEEEEEEecCccccccccccccCCCceeEEEee
Q 022111 145 DQAH-PVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD-----NTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWA 218 (302)
Q Consensus 145 ~~~h-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D-----~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~ 218 (302)
.... ...+..+.|+|++ +.|+..+.+ +.|++||+.++.. ..+..+. . .. +.|+
T Consensus 232 ~~~~~~~~~~~~~~spdg--------------~~l~~~~~~~~~~~~~l~~~d~~~g~~--~~l~~~~---~-~~-~~~s 290 (396)
T 3c5m_A 232 KEHAEGESCTHEFWIPDG--------------SAMAYVSYFKGQTDRVIYKANPETLEN--EEVMVMP---P-CS-HLMS 290 (396)
T ss_dssp SCCCTTEEEEEEEECTTS--------------SCEEEEEEETTTCCEEEEEECTTTCCE--EEEEECC---S-EE-EEEE
T ss_pred eccCCCccccceEECCCC--------------CEEEEEecCCCCccceEEEEECCCCCe--EEeeeCC---C-CC-CCcc
Confidence 2111 2247778999864 555555443 4499999876532 1111121 1 23 8899
Q ss_pred C-CCCCCccEEEEEe----------------cCCeEEEEEeccCCcceeeeeeccCCC-----------cEEEEEEccCC
Q 022111 219 P-NLGLPKSTIASAS----------------QDGTVVIWTCAKEGEQWEGRVLKDFKT-----------PVWSVSWSLTG 270 (302)
Q Consensus 219 p-~~~~~~~~l~s~s----------------~D~~i~iwd~~~~~~~~~~~~~~~~~~-----------~v~~~~~spdg 270 (302)
| ++ +.+++++ .+..|.+||+..... ..+..+.. .+..++|+|||
T Consensus 291 ~~dg----~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg 362 (396)
T 3c5m_A 291 NFDG----SLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA----QKLCKHSTSWDVLDGDRQITHPHPSFTPND 362 (396)
T ss_dssp CSSS----SEEEEEECCC----------CCCCCCEEEEEETTTTBC----CEEEECCCCCCCBTTBSSTTCCCCEECTTS
T ss_pred CCCC----ceEEEecCCcceeeccccccccCCCCcEEEEecccCce----EEccCCCCccccccccccCCCCCceEccCC
Confidence 9 85 5676654 347899999865321 11222222 24567899999
Q ss_pred CEEEEecCC--ceEEeeecC
Q 022111 271 NLLAVADAN--NVTLWKEAV 288 (302)
Q Consensus 271 ~~la~~~~d--~i~~w~~~~ 288 (302)
+.|+.++.. ...||.+..
T Consensus 363 ~~l~~~s~~~~~~~l~~~~~ 382 (396)
T 3c5m_A 363 DGVLFTSDFEGVPAIYIADV 382 (396)
T ss_dssp SEEEEEECTTSSCEEEEEEC
T ss_pred CeEEEEecCCCCceEEEEEE
Confidence 998877653 567777643
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.53 E-value=3.4e-12 Score=110.19 Aligned_cols=241 Identities=11% Similarity=0.099 Sum_probs=151.9
Q ss_pred cceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCc
Q 022111 12 DTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQND 91 (302)
Q Consensus 12 ~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~ 91 (302)
..|.+++|++++..+++.+.+++++.|. ......+..+...+.+++|++ ++++++++..++.|.+||..++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~g~l~~~~~~~~~i~~~d~~~~~- 77 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTIT-----AEPWLEISKKGLQLEGLNFDR--QGQLFLLDVFEGNIFKINPETKE- 77 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEE-----CEEEEEEESSCCCEEEEEECT--TSCEEEEETTTCEEEEECTTTCC-
T ss_pred cccceeeecCCccceeEEeecccCcccc-----cceeEEEeccCccccCcEECC--CCCEEEEECCCCEEEEEeCCCCc-
Confidence 4577888999888787778889999992 234556666767788999975 37888888889999999986643
Q ss_pred eeEEEEecCCCCCeeEEEecCCCCCcEEEEEecC----CcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCcee
Q 022111 92 WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD----GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALV 167 (302)
Q Consensus 92 ~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d----~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 167 (302)
.......+...+.+++++|+ +.++++...+ +.|.+|+........... ...+...+..+.++|++
T Consensus 78 --~~~~~~~~~~~~~~i~~~~d--g~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~i~~d~~g------ 146 (333)
T 2dg1_A 78 --IKRPFVSHKANPAAIKIHKD--GRLFVCYLGDFKSTGGIFAATENGDNLQDIIE-DLSTAYCIDDMVFDSKG------ 146 (333)
T ss_dssp --EEEEEECSSSSEEEEEECTT--SCEEEEECTTSSSCCEEEEECTTSCSCEEEEC-SSSSCCCEEEEEECTTS------
T ss_pred --EEEEeeCCCCCcceEEECCC--CcEEEEeCCCCCCCceEEEEeCCCCEEEEEEc-cCccCCcccceEECCCC------
Confidence 11222245678999999988 5666666555 688888865332111111 11233457788887753
Q ss_pred ecccCCCceeEEEeeC----CCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCcc-EEEEEecCCeEEEEEe
Q 022111 168 GLGLLDPVQKLASCGC----DNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKS-TIASASQDGTVVIWTC 242 (302)
Q Consensus 168 ~~~~~~~~~~l~s~~~----D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~-~l~s~s~D~~i~iwd~ 242 (302)
.++++... +....||.+........ .+..+...+..++|+|++ + .+++.+.++.|.+||+
T Consensus 147 --------~l~v~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~i~~~~dg----~~l~v~~~~~~~i~~~d~ 211 (333)
T 2dg1_A 147 --------GFYFTDFRGYSTNPLGGVYYVSPDFRTVT---PIIQNISVANGIALSTDE----KVLWVTETTANRLHRIAL 211 (333)
T ss_dssp --------CEEEEECCCBTTBCCEEEEEECTTSCCEE---EEEEEESSEEEEEECTTS----SEEEEEEGGGTEEEEEEE
T ss_pred --------CEEEEeccccccCCCceEEEEeCCCCEEE---EeecCCCcccceEECCCC----CEEEEEeCCCCeEEEEEe
Confidence 45555443 12345555432111111 111223457899999985 4 4456667889999998
Q ss_pred ccCCccee---eeeeccCC--CcEEEEEEccCCCEEEEecCC-ceEEeee
Q 022111 243 AKEGEQWE---GRVLKDFK--TPVWSVSWSLTGNLLAVADAN-NVTLWKE 286 (302)
Q Consensus 243 ~~~~~~~~---~~~~~~~~--~~v~~~~~spdg~~la~~~~d-~i~~w~~ 286 (302)
+....... ........ ..+..++++++|+++++...+ .|.+|+.
T Consensus 212 ~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 212 EDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp CTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred cCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence 64221111 01111111 357789999999988777555 7999986
No 178
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.52 E-value=9.9e-12 Score=103.82 Aligned_cols=239 Identities=10% Similarity=-0.002 Sum_probs=150.2
Q ss_pred ceeEEEEccCCCEEE-EeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCc
Q 022111 13 TVHDVAMDFYGKRLA-TASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQND 91 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~-s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~ 91 (302)
...+++++++++.++ +...++.|.+|+....... .....+...+.++++.++ ++++++.. ++.|.+||.....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~p~~i~~~~~--g~l~v~~~-~~~i~~~d~~~~~- 98 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTT--VLPFNGLYQPQGLAVDGA--GTVYVTDF-NNRVVTLAAGSNN- 98 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----E--ECCCCSCCSCCCEEECTT--CCEEEEET-TTEEEEECTTCSC-
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccc--eEeeCCcCCcceeEECCC--CCEEEEcC-CCEEEEEeCCCce-
Confidence 667899999998777 5567889999986432211 111223345778898653 67666655 8899999876532
Q ss_pred eeEEEEec-CCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecc
Q 022111 92 WTQAHTFN-DHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLG 170 (302)
Q Consensus 92 ~~~~~~~~-~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 170 (302)
...+. .....+..+++.|+ +.++++...++.|.+|+...... .............++++++
T Consensus 99 ---~~~~~~~~~~~p~~i~~~~~--g~l~v~~~~~~~i~~~~~~~~~~---~~~~~~~~~~p~~i~~~~~---------- 160 (270)
T 1rwi_B 99 ---QTVLPFDGLNYPEGLAVDTQ--GAVYVADRGNNRVVKLAAGSKTQ---TVLPFTGLNDPDGVAVDNS---------- 160 (270)
T ss_dssp ---CEECCCCSCSSEEEEEECTT--CCEEEEEGGGTEEEEECTTCCSC---EECCCCSCCSCCCEEECTT----------
T ss_pred ---EeeeecCCcCCCcceEECCC--CCEEEEECCCCEEEEEECCCcee---EeeccccCCCceeEEEeCC----------
Confidence 12222 23356889999987 56677767778888885432111 1111112223455666654
Q ss_pred cCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCccee
Q 022111 171 LLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWE 250 (302)
Q Consensus 171 ~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~ 250 (302)
+..+++...++.|.+||....... .....+...+.+|+++|++ ..+++...++.|.+|+......
T Consensus 161 ----g~l~v~~~~~~~i~~~~~~~~~~~----~~~~~~~~~p~~i~~d~~g----~l~v~~~~~~~v~~~~~~~~~~--- 225 (270)
T 1rwi_B 161 ----GNVYVTDTDNNRVVKLEAESNNQV----VLPFTDITAPWGIAVDEAG----TVYVTEHNTNQVVKLLAGSTTS--- 225 (270)
T ss_dssp ----CCEEEEEGGGTEEEEECTTTCCEE----ECCCSSCCSEEEEEECTTC----CEEEEETTTSCEEEECTTCSCC---
T ss_pred ----CCEEEEECCCCEEEEEecCCCceE----eecccCCCCceEEEECCCC----CEEEEECCCCcEEEEcCCCCcc---
Confidence 456777767788999997654211 1111223568899999985 6677777788999998764321
Q ss_pred eeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCc
Q 022111 251 GRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDG 290 (302)
Q Consensus 251 ~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~ 290 (302)
..........+.+++++|+|+++++...+ .|++++...+.
T Consensus 226 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 226 TVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred eeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 11111222468899999999977777665 79999876543
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.51 E-value=2.6e-13 Score=119.53 Aligned_cols=233 Identities=9% Similarity=0.033 Sum_probs=137.3
Q ss_pred ceeEEEEccCCCEEEEeeCC-C--cEEEEeecCCCceEEEEecCcccC-eEEEEeeCCCCCCEEEEEeCCCeEEEEEcCC
Q 022111 13 TVHDVAMDFYGKRLATASSD-S--SIKIIGLSNSASQHLATLKGHRGP-VWQVAWAHPKFGSILASCSYDGQVIIWKEGN 88 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~~~d-~--~v~lw~~~~~~~~~~~~~~~h~~~-v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~ 88 (302)
.+.+++|+|||++|+..... + .|.+|++..+ +. ..+..+... ...+.|+|+ |++|+.++.++.|.+||+.+
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~--~~-~~l~~~~~~~~~~~~~spd--g~~l~~~~~~~~l~~~d~~~ 111 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQ--QA-VQLTEGKGDNTFGGFISTD--ERAFFYVKNELNLMKVDLET 111 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTT--EE-EECCCSSCBCTTTCEECTT--SSEEEEEETTTEEEEEETTT
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCC--cE-EEeecCCCCccccceECCC--CCEEEEEEcCCcEEEEECCC
Confidence 36778899999998776543 3 5777776543 32 233333333 333778864 89999999999999999876
Q ss_pred CCceeEEEEecCCCCCeeE-------------------EEecCCCCCcEEEEE-----ecCCcEEEEEecCCCCeeeeee
Q 022111 89 QNDWTQAHTFNDHKSSVNS-------------------IAWAPHELGLSLACG-----SSDGNISVFTATADGGWDTTRI 144 (302)
Q Consensus 89 ~~~~~~~~~~~~h~~~i~~-------------------l~~~pd~~~~~l~sg-----~~d~~v~~~~~~~~~~~~~~~~ 144 (302)
+.. ...+..+...... +.|+|+ +..++.. ..+..|.+||+.... .. .+
T Consensus 112 ~~~---~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spd--g~~~~~~~~~~~~~~~~l~~~d~~~g~-~~--~~ 183 (396)
T 3c5m_A 112 LEE---QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPL--TSWEKFAEFYHTNPTCRLIKVDIETGE-LE--VI 183 (396)
T ss_dssp CCE---EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCC--CSHHHHHHHHHTCCCEEEEEEETTTCC-EE--EE
T ss_pred CCc---EEEEecccccCCCCCEEEeccCCccccccccccccCCC--CcceeeeeeccCCCcceEEEEECCCCc-EE--ee
Confidence 532 2222223332222 345665 3334333 345678888876432 21 12
Q ss_pred cccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCC------CcEEEEEEecCccccccccccccC--CCceeEEE
Q 022111 145 DQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD------NTVKVWKMYNGIWKMDCFPALQMH--SDWVRSVA 216 (302)
Q Consensus 145 ~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D------~~v~iwd~~~~~~~~~~~~~~~~h--~~~v~~v~ 216 (302)
. .+...+..+.|+|.. ++.|+.++.+ ..|.+||+.++.. ..+..+ ...+..++
T Consensus 184 ~-~~~~~~~~~~~sp~d-------------g~~l~~~~~~~~~~~~~~l~~~d~~~~~~-----~~l~~~~~~~~~~~~~ 244 (396)
T 3c5m_A 184 H-QDTAWLGHPIYRPFD-------------DSTVGFCHEGPHDLVDARMWLVNEDGSNV-----RKIKEHAEGESCTHEF 244 (396)
T ss_dssp E-EESSCEEEEEEETTE-------------EEEEEEEECSCSSSCSCCCEEEETTSCCC-----EESSCCCTTEEEEEEE
T ss_pred c-cCCcccccceECCCC-------------CCEEEEEecCCCCCCCceEEEEECCCCce-----eEeeccCCCccccceE
Confidence 1 345567888998821 3555555443 3577777654321 112222 23588899
Q ss_pred eeCCCCCCccEEEEEecC-----CeEEEEEeccCCcceeeeeeccCCCcEEEEEEcc-CCCEEEEec-------------
Q 022111 217 WAPNLGLPKSTIASASQD-----GTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSL-TGNLLAVAD------------- 277 (302)
Q Consensus 217 ~~p~~~~~~~~l~s~s~D-----~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~la~~~------------- 277 (302)
|+|++ +.|+.++.+ +.|++||+..... ..+..... .. ++|+| ||++|++++
T Consensus 245 ~spdg----~~l~~~~~~~~~~~~~l~~~d~~~g~~----~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~ 314 (396)
T 3c5m_A 245 WIPDG----SAMAYVSYFKGQTDRVIYKANPETLEN----EEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSY 314 (396)
T ss_dssp ECTTS----SCEEEEEEETTTCCEEEEEECTTTCCE----EEEEECCS-EE-EEEECSSSSEEEEEECCC----------
T ss_pred ECCCC----CEEEEEecCCCCccceEEEEECCCCCe----EEeeeCCC-CC-CCccCCCCceEEEecCCcceeecccccc
Confidence 99996 556666554 4599999865321 11112221 22 89999 999888753
Q ss_pred ---CC-ceEEeeec
Q 022111 278 ---AN-NVTLWKEA 287 (302)
Q Consensus 278 ---~d-~i~~w~~~ 287 (302)
.+ .|.+|+..
T Consensus 315 ~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 315 NIENDPFLYVLNTK 328 (396)
T ss_dssp CCCCCCEEEEEETT
T ss_pred ccCCCCcEEEEecc
Confidence 22 68889864
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.47 E-value=2.4e-11 Score=105.23 Aligned_cols=224 Identities=13% Similarity=0.107 Sum_probs=134.6
Q ss_pred cceeEEEEccCCCEEEEee---------CCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCC---C
Q 022111 12 DTVHDVAMDFYGKRLATAS---------SDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYD---G 79 (302)
Q Consensus 12 ~~v~~~~~s~~~~~l~s~~---------~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D---~ 79 (302)
..+....+ ||++++... .++.|.+|++..+.. ..+ ..+..++|+|+ |++||.++.+ +
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~---~~l----~~~~~~~~SpD--g~~la~~~~~~~~~ 83 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNAR---RFI----ENATMPRISPD--GKKIAFMRANEEKK 83 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCE---EEE----ESCEEEEECTT--SSEEEEEEEETTTT
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCce---EEc----ccCCCeEECCC--CCEEEEEEeccCCC
Confidence 35667777 898887542 256788888865432 223 46788999875 8888877754 3
Q ss_pred e--EEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecC---------------------------CcEEE
Q 022111 80 Q--VIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD---------------------------GNISV 130 (302)
Q Consensus 80 ~--i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d---------------------------~~v~~ 130 (302)
. |.+|++.++. .. .+..+.. +..++|+|| +..|+.++.+ ..|.+
T Consensus 84 ~~~l~~~~~~~g~---~~-~l~~~~~-~~~~~wspd--g~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 156 (347)
T 2gop_A 84 VSEIWVADLETLS---SK-KILEAKN-IRSLEWNED--SRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWI 156 (347)
T ss_dssp EEEEEEEETTTTE---EE-EEEEESE-EEEEEECTT--SSEEEEEEECCCC---------CCCC---------CEEEEEE
T ss_pred cceEEEEECCCCc---eE-EEEcCCC-ccceeECCC--CCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEE
Confidence 4 6666765542 22 2222333 899999998 6677777642 46777
Q ss_pred EEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCC-------cEEEEEEecCcccccccc
Q 022111 131 FTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN-------TVKVWKMYNGIWKMDCFP 203 (302)
Q Consensus 131 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~-------~v~iwd~~~~~~~~~~~~ 203 (302)
|++... .. ...+. . . .+..+.|+|+ + .++++..+. ...||.+.++. ..
T Consensus 157 ~d~~~~-~~-~~~l~-~-~-~~~~~~~spd--------------g-~~~~~~~~~~~~~~~~~~~l~~~d~~~-----~~ 211 (347)
T 2gop_A 157 FDTESE-EV-IEEFE-K-P-RFSSGIWHRD--------------K-IVVNVPHREIIPQYFKFWDIYIWEDGK-----EE 211 (347)
T ss_dssp EETTTT-EE-EEEEE-E-E-TTCEEEEETT--------------E-EEEEEECCCSSCCSSCCEEEEEEETTE-----EE
T ss_pred EECCCC-eE-Eeeec-C-C-CcccccCCCC--------------e-EEEEEecccccccccccccEEEeCCCc-----eE
Confidence 776533 21 12222 1 2 5678888875 4 555554442 45666655332 11
Q ss_pred ccccCCCceeEEEeeCCCCCCccEEEEEecC--------CeEEEEEeccCCcceeeeeeccCCCcEEE-EEEccCCCEEE
Q 022111 204 ALQMHSDWVRSVAWAPNLGLPKSTIASASQD--------GTVVIWTCAKEGEQWEGRVLKDFKTPVWS-VSWSLTGNLLA 274 (302)
Q Consensus 204 ~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D--------~~i~iwd~~~~~~~~~~~~~~~~~~~v~~-~~~spdg~~la 274 (302)
.+..+ ..+.++ +|++ +.|+.++.+ ..|.+|| . .. . ..+..++...+.. +.|+ || +++
T Consensus 212 ~l~~~-~~~~~~--spdg----~~l~~~~~~~~~~~~~~~~l~~~d--~-~~-~-~~l~~~~~~~~~~~~~~s-dg-~~~ 277 (347)
T 2gop_A 212 KMFEK-VSFYAV--DSDG----ERILLYGKPEKKYMSEHNKLYIYD--G-KE-V-MGILDEVDRGVGQAKIKD-GK-VYF 277 (347)
T ss_dssp EEEEE-ESEEEE--EECS----SCEEEEECCSSSCCCSSCEEEEEC--S-SC-E-EESSTTCCSEEEEEEEET-TE-EEE
T ss_pred EeccC-cceeeE--CCCC----CEEEEEEccccCCccccceEEEEC--C-Cc-e-EeccccCCcccCCccEEc-Cc-EEE
Confidence 22223 445544 8986 567776644 3577776 2 11 1 2233455567876 9999 98 877
Q ss_pred EecCC-ceEEeeecCCceEEE
Q 022111 275 VADAN-NVTLWKEAVDGEWQQ 294 (302)
Q Consensus 275 ~~~~d-~i~~w~~~~~~~~~~ 294 (302)
++..+ .++|| .. +|+..+
T Consensus 278 ~~~~~~~~~l~-~~-~g~~~~ 296 (347)
T 2gop_A 278 TLFEEGSVNLY-IW-DGEIKP 296 (347)
T ss_dssp EEEETTEEEEE-EE-SSSEEE
T ss_pred EEecCCcEEEE-Ec-CCceEE
Confidence 77766 79999 87 555433
No 181
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.47 E-value=2.5e-10 Score=97.34 Aligned_cols=248 Identities=8% Similarity=0.030 Sum_probs=148.2
Q ss_pred ccceeEEEEccCCCEEEE-------eeCCCcEEEEeecCCCceEEEE--ecCcccCeEEEEeeCCCCCCEEEEEeCCCeE
Q 022111 11 EDTVHDVAMDFYGKRLAT-------ASSDSSIKIIGLSNSASQHLAT--LKGHRGPVWQVAWAHPKFGSILASCSYDGQV 81 (302)
Q Consensus 11 ~~~v~~~~~s~~~~~l~s-------~~~d~~v~lw~~~~~~~~~~~~--~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i 81 (302)
-....+++|+++++.+++ +..++.|.+|+........+.. ..++...+..+++.++ .++++++.. ...|
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~-~g~l~v~~~-~~~l 94 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRD-ANQLFVADM-RLGL 94 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSS-SSEEEEEET-TTEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecC-CCcEEEEEC-CCCE
Confidence 345678899999988887 6778999999875433222111 1235567889998653 155555444 4478
Q ss_pred EEEEcCCCCceeEE-EEe-c-CCCCCeeEEEecCCCCCcEEEEEecC---------------CcEEEEEecCCCCeeeee
Q 022111 82 IIWKEGNQNDWTQA-HTF-N-DHKSSVNSIAWAPHELGLSLACGSSD---------------GNISVFTATADGGWDTTR 143 (302)
Q Consensus 82 ~iwd~~~~~~~~~~-~~~-~-~h~~~i~~l~~~pd~~~~~l~sg~~d---------------~~v~~~~~~~~~~~~~~~ 143 (302)
.+||.. +. .... ... . .....+.++++.|+ +.++++...+ +.|..|+. .+.....
T Consensus 95 ~~~d~~-g~-~~~~~~~~~~~~~~~~~~~i~~d~~--g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~g~~~~~- 167 (314)
T 1pjx_A 95 LVVQTD-GT-FEEIAKKDSEGRRMQGCNDCAFDYE--GNLWITAPAGEVAPADYTRSMQEKFGSIYCFTT--DGQMIQV- 167 (314)
T ss_dssp EEEETT-SC-EEECCSBCTTSCBCBCCCEEEECTT--SCEEEEECBCBCTTSCCCBTTSSSCEEEEEECT--TSCEEEE-
T ss_pred EEEeCC-CC-EEEEEeccCCCccccCCcCEEECCC--CCEEEEecCcccccccccccccCCCCeEEEECC--CCCEEEe-
Confidence 889876 32 1111 110 1 11245789999887 5566655444 34444442 2322211
Q ss_pred ecccCCCCeEEEEeC----CCCCCCceeecccCCCce-eEEEeeCCCcEEEEEEe-cCccc-cccccccccCC-CceeEE
Q 022111 144 IDQAHPVGVTSVSWA----PAMAPGALVGLGLLDPVQ-KLASCGCDNTVKVWKMY-NGIWK-MDCFPALQMHS-DWVRSV 215 (302)
Q Consensus 144 ~~~~h~~~v~~~~~~----~~~~~~~~~~~~~~~~~~-~l~s~~~D~~v~iwd~~-~~~~~-~~~~~~~~~h~-~~v~~v 215 (302)
. .+......++|+ |+ ++ .+++...++.|.+||+. ++... ......+.++. .....+
T Consensus 168 ~--~~~~~~~~i~~~~~~d~d--------------g~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i 231 (314)
T 1pjx_A 168 D--TAFQFPNGIAVRHMNDGR--------------PYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGM 231 (314)
T ss_dssp E--EEESSEEEEEEEECTTSC--------------EEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEE
T ss_pred c--cCCCCcceEEEecccCCC--------------CCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCce
Confidence 1 122234667776 54 33 44555678899999986 33210 11222334444 667889
Q ss_pred EeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC--ceEEeeecCCc
Q 022111 216 AWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN--NVTLWKEAVDG 290 (302)
Q Consensus 216 ~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d--~i~~w~~~~~~ 290 (302)
++++++ +..++...++.|.+||.++.... .........+.+++|+|+|+.|.+++.+ .|..|+....|
T Consensus 232 ~~d~~G----~l~v~~~~~~~i~~~d~~~g~~~---~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~g 301 (314)
T 1pjx_A 232 DFDEDN----NLLVANWGSSHIEVFGPDGGQPK---MRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNG 301 (314)
T ss_dssp EEBTTC----CEEEEEETTTEEEEECTTCBSCS---EEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSCB
T ss_pred EECCCC----CEEEEEcCCCEEEEEcCCCCcEe---EEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCCC
Confidence 999985 66777778899999997632211 1112233568999999999966555444 79999876654
No 182
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.45 E-value=1.5e-10 Score=101.53 Aligned_cols=245 Identities=10% Similarity=0.047 Sum_probs=137.1
Q ss_pred cCCCEEEEee------CCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEe----------CCCeEEEE
Q 022111 21 FYGKRLATAS------SDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCS----------YDGQVIIW 84 (302)
Q Consensus 21 ~~~~~l~s~~------~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s----------~D~~i~iw 84 (302)
+++++++... .|++|++||... .+.+..+..+..+ .++|+++ +++|++++ .+++|.+|
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t--~~~~~~i~~g~~p--~i~~spd--g~~lyv~~~~~~~~~~g~~~~~v~v~ 86 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTN--GKFLGMVPTAFNG--HVQVSND--GKKIYTMTTYHERITRGKRSDVVEVW 86 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTT--CCEEEEEECCEEE--EEEECTT--SSEEEEEEEEETTSSSSCEEEEEEEE
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCC--CeEEEEecCCCCC--ceEECCC--CCEEEEEEecccccccCCCCCEEEEE
Confidence 3556666543 478999999754 3445666666655 8999864 78887775 36789999
Q ss_pred EcCCCCceeEEEEecC------CCCCeeEEEecCCCCCcEEEEEec--CCcEEEEEecCCCCeeeee-ecccC-------
Q 022111 85 KEGNQNDWTQAHTFND------HKSSVNSIAWAPHELGLSLACGSS--DGNISVFTATADGGWDTTR-IDQAH------- 148 (302)
Q Consensus 85 d~~~~~~~~~~~~~~~------h~~~i~~l~~~pd~~~~~l~sg~~--d~~v~~~~~~~~~~~~~~~-~~~~h------- 148 (302)
|..+.. ...++.. +......++++|| |++|+++.. ++.|.+||..+... ... +....
T Consensus 87 d~~t~~---~~~~i~~~~~~~~~g~~p~~i~~spd--g~~l~v~n~~~~~~v~v~d~~~~~~--~~~~i~~~~~~~v~~~ 159 (361)
T 2oiz_A 87 DADKLT---FEKEISLPPKRVQGLNYDGLFRQTTD--GKFIVLQNASPATSIGIVDVAKGDY--VEDVTAAAGCWSVIPQ 159 (361)
T ss_dssp ETTTCC---EEEEEEECTTBCCBCCCGGGEEECTT--SSEEEEEEESSSEEEEEEETTTTEE--EEEEGGGTTEEEEEEC
T ss_pred ECcCCc---EEEEEEcCccccccCCCcceEEECCC--CCEEEEECCCCCCeEEEEECCCCcE--EEEEecCCCcceeEEc
Confidence 987653 3333322 2245678999998 667777663 68999999875422 122 11000
Q ss_pred CC-CeEEEEeCCCCC--------CCcee----------------ecccCCCceeEEEeeCCCcEEEEEEecCcccccccc
Q 022111 149 PV-GVTSVSWAPAMA--------PGALV----------------GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFP 203 (302)
Q Consensus 149 ~~-~v~~~~~~~~~~--------~~~~~----------------~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~ 203 (302)
+. .-.-+..++++. .+... .....+++..++..+.++.|.++|+...... ...
T Consensus 160 p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~--~~~ 237 (361)
T 2oiz_A 160 PNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVK--VDG 237 (361)
T ss_dssp TTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCE--EEE
T ss_pred CCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCce--ecc
Confidence 00 000011111110 01110 0000112334455567778888887543111 000
Q ss_pred ccc------cCCC----ceeEEEeeCCCCCCccEEEEEe----------cCCeEEEEEeccCCcceeeeeeccCCCcEEE
Q 022111 204 ALQ------MHSD----WVRSVAWAPNLGLPKSTIASAS----------QDGTVVIWTCAKEGEQWEGRVLKDFKTPVWS 263 (302)
Q Consensus 204 ~~~------~h~~----~v~~v~~~p~~~~~~~~l~s~s----------~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 263 (302)
.+. .+.. ...-++|+|++ +..+++.+ ....|.+||+.+.+. ...+ ... . +++
T Consensus 238 ~~~~~~~~~~~~~~~p~g~~~~a~~~dg---~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~--v~~i-~~~-~-p~~ 309 (361)
T 2oiz_A 238 PWSLLNDEDKAKNWVPGGYNLVGLHRAS---GRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR--VARI-PGR-D-ALS 309 (361)
T ss_dssp EEESCCHHHHHTTCEECCSSCEEEETTT---TEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE--EEEE-ECT-T-CCE
T ss_pred cccccCccccccccccCCeeEEEEecCC---CeEEEEEccCCCcccccCCCceEEEEECCCCcE--EEEE-ecC-C-eeE
Confidence 000 0111 11126889986 23444433 134799999876421 1122 222 2 899
Q ss_pred EEEccCCCEEEEecCCceEEeeecC
Q 022111 264 VSWSLTGNLLAVADANNVTLWKEAV 288 (302)
Q Consensus 264 ~~~spdg~~la~~~~d~i~~w~~~~ 288 (302)
++|+|||++|++++.+.|.+||.+.
T Consensus 310 ia~spdg~~l~v~n~~~v~v~D~~t 334 (361)
T 2oiz_A 310 MTIDQQRNLMLTLDGGNVNVYDISQ 334 (361)
T ss_dssp EEEETTTTEEEEECSSCEEEEECSS
T ss_pred EEECCCCCEEEEeCCCeEEEEECCC
Confidence 9999999999888777899999764
No 183
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.45 E-value=1.7e-09 Score=91.11 Aligned_cols=248 Identities=10% Similarity=-0.012 Sum_probs=158.3
Q ss_pred ccccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCC
Q 022111 9 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGN 88 (302)
Q Consensus 9 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~ 88 (302)
.+...+.+++++++|+.+++...++.|.+|+.. .... ...+..+...+..+++.+ ++.++++...++.|..||...
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~-~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~i~~~~~~g 87 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKIT-EYPLPTPDAKVMCLTISS--DGEVWFTENAANKIGRITKKG 87 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-EEECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEECTTS
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE-EecCCcccCceeeEEECC--CCCEEEeCCCCCeEEEECCCC
Confidence 445678999999999988776667899999876 3222 122233456788999865 377877777788899998752
Q ss_pred CCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceee
Q 022111 89 QNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVG 168 (302)
Q Consensus 89 ~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 168 (302)
... ...+......+..+++.|+ +.++++...++.|..|+. .+........ .+...+..+.+.++
T Consensus 88 --~~~-~~~~~~~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~d~--~g~~~~~~~~-~~~~~~~~i~~~~~-------- 151 (299)
T 2z2n_A 88 --IIK-EYTLPNPDSAPYGITEGPN--GDIWFTEMNGNRIGRITD--DGKIREYELP-NKGSYPSFITLGSD-------- 151 (299)
T ss_dssp --CEE-EEECSSTTCCEEEEEECTT--SCEEEEETTTTEEEEECT--TCCEEEEECS-STTCCEEEEEECTT--------
T ss_pred --cEE-EEeCCCcCCCceeeEECCC--CCEEEEecCCceEEEECC--CCCEEEecCC-CCCCCCceEEEcCC--------
Confidence 111 1222234557889999886 566776666788888876 2222222111 22334667777654
Q ss_pred cccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcc
Q 022111 169 LGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQ 248 (302)
Q Consensus 169 ~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~ 248 (302)
+..+++...++.|.+||. ++... .+ .+..+...+.++++.|++ ...++...++.|.+||. ...
T Consensus 152 ------g~l~v~~~~~~~i~~~~~-~g~~~--~~-~~~~~~~~~~~i~~~~~g----~l~v~~~~~~~i~~~~~-~g~-- 214 (299)
T 2z2n_A 152 ------NALWFTENQNNAIGRITE-SGDIT--EF-KIPTPASGPVGITKGNDD----ALWFVEIIGNKIGRITT-SGE-- 214 (299)
T ss_dssp ------SCEEEEETTTTEEEEECT-TCCEE--EE-ECSSTTCCEEEEEECTTS----SEEEEETTTTEEEEECT-TCC--
T ss_pred ------CCEEEEeCCCCEEEEEcC-CCcEE--Ee-eCCCCCCcceeEEECCCC----CEEEEccCCceEEEECC-CCc--
Confidence 356666666788999987 44211 11 122334568899999985 56666667889999987 321
Q ss_pred eeeeeeccCCCcEEEEEEccCCCEEEEecC-CceEEeeecCCceEEEe
Q 022111 249 WEGRVLKDFKTPVWSVSWSLTGNLLAVADA-NNVTLWKEAVDGEWQQV 295 (302)
Q Consensus 249 ~~~~~~~~~~~~v~~~~~spdg~~la~~~~-d~i~~w~~~~~~~~~~~ 295 (302)
............+.+++++++|+++++... +.|.+|+. +++....
T Consensus 215 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~--~g~~~~~ 260 (299)
T 2z2n_A 215 ITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS--NNIIEEY 260 (299)
T ss_dssp EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET--TTEEEEE
T ss_pred EEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC--CCceEEE
Confidence 111112223356889999999997766644 47999986 3554443
No 184
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.43 E-value=3.5e-11 Score=104.06 Aligned_cols=209 Identities=15% Similarity=0.135 Sum_probs=142.7
Q ss_pred ccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEe---------cCcccCeEEEEeeCCCCCCEEEEEe-CCCe
Q 022111 11 EDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATL---------KGHRGPVWQVAWAHPKFGSILASCS-YDGQ 80 (302)
Q Consensus 11 ~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~---------~~h~~~v~~v~~~~~~~~~~l~s~s-~D~~ 80 (302)
-.....++++++|+++++...++.|++|+..... ..+..+ .++......|++++. ++.++++.+ .++.
T Consensus 90 ~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~-~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~-~g~lyv~d~~~~~~ 167 (329)
T 3fvz_A 90 FYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE-GPLLILGRSMQPGSDQNHFCQPTDVAVEPS-TGAVFVSDGYCNSR 167 (329)
T ss_dssp CSSEEEEEECTTSCEEEEETTTTEEEEECTTCSS-CCSEEESBTTBCCCSTTCCSSEEEEEECTT-TCCEEEEECSSCCE
T ss_pred cCCceEEEECCCCCEEEEECCCCEEEEEeCCCCe-EEEEEecccCCCCCCccccCCCcEEEEeCC-CCeEEEEeCCCCCe
Confidence 3467789999999988888888999999975431 123334 244456789999763 378888886 6999
Q ss_pred EEEEEcCCCCceeEEEEec----------CCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeec-ccCC
Q 022111 81 VIIWKEGNQNDWTQAHTFN----------DHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRID-QAHP 149 (302)
Q Consensus 81 i~iwd~~~~~~~~~~~~~~----------~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~-~~h~ 149 (302)
|++|+.. +. .+..+. ++......++++|+. +.++++...++.|++|+..++ ... ..+. ..+.
T Consensus 168 I~~~~~~-g~---~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~-g~l~v~d~~~~~I~~~~~~~G-~~~-~~~~~~~~~ 240 (329)
T 3fvz_A 168 IVQFSPS-GK---FVTQWGEESSGSSPRPGQFSVPHSLALVPHL-DQLCVADRENGRIQCFKTDTK-EFV-REIKHASFG 240 (329)
T ss_dssp EEEECTT-SC---EEEEECEECCSSSCCTTEESCEEEEEEETTT-TEEEEEETTTTEEEEEETTTC-CEE-EEECCTTTT
T ss_pred EEEEcCC-CC---EEEEeccCCCCCCCCCcccCCCcEEEEECCC-CEEEEEECCCCEEEEEECCCC-cEE-EEEeccccC
Confidence 9999853 22 233332 122347899999873 567777788899999997633 222 2221 2345
Q ss_pred CCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcccccccccc---ccCCCceeEEEeeCCCCCCcc
Q 022111 150 VGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPAL---QMHSDWVRSVAWAPNLGLPKS 226 (302)
Q Consensus 150 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~~~~~ 226 (302)
..+..++++| + .++. .++..+++...+..|++||+.++. .+..+ .++.....+|+++|++ .
T Consensus 241 ~~~~~~~~~p-g---~~~~----~~g~~~v~~~~~~~v~~~~~~~g~----~~~~~~~~~~~~~~p~~ia~~~dG----~ 304 (329)
T 3fvz_A 241 RNVFAISYIP-G---FLFA----VNGKPYFGDQEPVQGFVMNFSSGE----IIDVFKPVRKHFDMPHDIVASEDG----T 304 (329)
T ss_dssp TCEEEEEEET-T---EEEE----EECCCCTTCSCCCCEEEEETTTCC----EEEEECCSSSCCSSEEEEEECTTS----E
T ss_pred CCcceeeecC-C---EEEE----eCCCEEeccCCCcEEEEEEcCCCe----EEEEEcCCCCccCCeeEEEECCCC----C
Confidence 5677888887 1 1111 123455556667799999987763 22233 3567778999999985 7
Q ss_pred EEEEEecCCeEEEEEecc
Q 022111 227 TIASASQDGTVVIWTCAK 244 (302)
Q Consensus 227 ~l~s~s~D~~i~iwd~~~ 244 (302)
.+++...++.|++|++..
T Consensus 305 lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 305 VYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEESSSCCEEEEEEEE
T ss_pred EEEEECCCCEEEEEeCCc
Confidence 888999999999999864
No 185
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.43 E-value=1.1e-10 Score=98.56 Aligned_cols=198 Identities=17% Similarity=0.145 Sum_probs=131.6
Q ss_pred ccccceeEEEE-ccCCCEEEEeeC-CCcEEEEeecCCCceEEEEec-CcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 9 GHEDTVHDVAM-DFYGKRLATASS-DSSIKIIGLSNSASQHLATLK-GHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 9 ~h~~~v~~~~~-s~~~~~l~s~~~-d~~v~lw~~~~~~~~~~~~~~-~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
+|...+..+++ +++++++++... ++.|++|+... +.+..+. .+...+..+++.++ |+++++...++.|.+||
T Consensus 74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g---~~~~~~~~~~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~ 148 (286)
T 1q7f_A 74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYG---QFVRKFGATILQHPRGVTVDNK--GRIIVVECKVMRVIIFD 148 (286)
T ss_dssp TCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTS---CEEEEECTTTCSCEEEEEECTT--SCEEEEETTTTEEEEEC
T ss_pred ccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCC---cEEEEecCccCCCceEEEEeCC--CCEEEEECCCCEEEEEc
Confidence 34457888999 577766666533 78999998432 3344443 34456789999753 78888888889999998
Q ss_pred cCCCCceeEEEEec--CCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeec-ccCCCCeEEEEeCCCCC
Q 022111 86 EGNQNDWTQAHTFN--DHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRID-QAHPVGVTSVSWAPAMA 162 (302)
Q Consensus 86 ~~~~~~~~~~~~~~--~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~ 162 (302)
.... ....+. .+...+..++++|+ +.++++...++.|++|+.. +.. ...+. .++......++++|+
T Consensus 149 ~~g~----~~~~~~~~~~~~~p~~i~~~~~--g~l~v~~~~~~~i~~~~~~--g~~-~~~~~~~g~~~~p~~i~~d~~-- 217 (286)
T 1q7f_A 149 QNGN----VLHKFGCSKHLEFPNGVVVNDK--QEIFISDNRAHCVKVFNYE--GQY-LRQIGGEGITNYPIGVGINSN-- 217 (286)
T ss_dssp TTSC----EEEEEECTTTCSSEEEEEECSS--SEEEEEEGGGTEEEEEETT--CCE-EEEESCTTTSCSEEEEEECTT--
T ss_pred CCCC----EEEEeCCCCccCCcEEEEECCC--CCEEEEECCCCEEEEEcCC--CCE-EEEEccCCccCCCcEEEECCC--
Confidence 6432 233332 34567899999997 6677777788999999863 221 12221 122345677877765
Q ss_pred CCceeecccCCCceeEEEeeCCC-cEEEEEEecCccccccccccccC--CCceeEEEeeCCCCCCccEEEEEecCCeEEE
Q 022111 163 PGALVGLGLLDPVQKLASCGCDN-TVKVWKMYNGIWKMDCFPALQMH--SDWVRSVAWAPNLGLPKSTIASASQDGTVVI 239 (302)
Q Consensus 163 ~~~~~~~~~~~~~~~l~s~~~D~-~v~iwd~~~~~~~~~~~~~~~~h--~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~i 239 (302)
+.++++...++ .|++||.... .+..+..+ ...+.+++++|++ +.+++ +.|++|++
T Consensus 218 ------------G~l~v~~~~~~~~i~~~~~~g~-----~~~~~~~~~~~~~~~~i~~~~~g----~l~vs-~~~~~v~v 275 (286)
T 1q7f_A 218 ------------GEILIADNHNNFNLTIFTQDGQ-----LISALESKVKHAQCFDVALMDDG----SVVLA-SKDYRLYI 275 (286)
T ss_dssp ------------CCEEEEECSSSCEEEEECTTSC-----EEEEEEESSCCSCEEEEEEETTT----EEEEE-ETTTEEEE
T ss_pred ------------CCEEEEeCCCCEEEEEECCCCC-----EEEEEcccCCCCcceeEEECCCC----cEEEE-CCCCeEEE
Confidence 46777777775 9999995432 22233322 2347799999985 56666 67999999
Q ss_pred EEecc
Q 022111 240 WTCAK 244 (302)
Q Consensus 240 wd~~~ 244 (302)
|++..
T Consensus 276 ~~~~~ 280 (286)
T 1q7f_A 276 YRYVQ 280 (286)
T ss_dssp EECSC
T ss_pred EEccc
Confidence 98753
No 186
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.42 E-value=7.1e-11 Score=103.60 Aligned_cols=234 Identities=11% Similarity=0.073 Sum_probs=135.5
Q ss_pred EEEEccCCCEEEEee----------CCCcEEEEeecCCCceEEEEecC------cccCeEEEEeeCCCCCCEEEEEeC--
Q 022111 16 DVAMDFYGKRLATAS----------SDSSIKIIGLSNSASQHLATLKG------HRGPVWQVAWAHPKFGSILASCSY-- 77 (302)
Q Consensus 16 ~~~~s~~~~~l~s~~----------~d~~v~lw~~~~~~~~~~~~~~~------h~~~v~~v~~~~~~~~~~l~s~s~-- 77 (302)
.++|+||+++|+++. .+++|.+||... .+.+..+.. +......++|+++ |++|+++..
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t--~~~~~~i~~~~~~~~~g~~p~~i~~spd--g~~l~v~n~~~ 129 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK--LTFEKEISLPPKRVQGLNYDGLFRQTTD--GKFIVLQNASP 129 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT--CCEEEEEEECTTBCCBCCCGGGEEECTT--SSEEEEEEESS
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC--CcEEEEEEcCccccccCCCcceEEECCC--CCEEEEECCCC
Confidence 789999999999886 367899999754 334444431 1234567888764 888877764
Q ss_pred CCeEEEEEcCCCCceeEEEE-ecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCee-ee----eecc-----
Q 022111 78 DGQVIIWKEGNQNDWTQAHT-FNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWD-TT----RIDQ----- 146 (302)
Q Consensus 78 D~~i~iwd~~~~~~~~~~~~-~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~-~~----~~~~----- 146 (302)
+++|.+||+.+. +.+.+ +.. .+ ...+.+.|+. ...+++.+.|+.+.+++....+... .. .+..
T Consensus 130 ~~~v~v~d~~~~---~~~~~~i~~-~~-~~~v~~~p~~-~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~ 203 (361)
T 2oiz_A 130 ATSIGIVDVAKG---DYVEDVTAA-AG-CWSVIPQPNR-PRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI 203 (361)
T ss_dssp SEEEEEEETTTT---EEEEEEGGG-TT-EEEEEECTTS-SSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB
T ss_pred CCeEEEEECCCC---cEEEEEecC-CC-cceeEEcCCC-CeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce
Confidence 689999999765 24444 432 11 1224556663 2467777888888888775433221 00 0000
Q ss_pred --------------cCCCCeEEEEeCCCCC-------------------CCceeecccCCCceeEE-Eee----------
Q 022111 147 --------------AHPVGVTSVSWAPAMA-------------------PGALVGLGLLDPVQKLA-SCG---------- 182 (302)
Q Consensus 147 --------------~h~~~v~~~~~~~~~~-------------------~~~~~~~~~~~~~~~l~-s~~---------- 182 (302)
.+...+..+.+..... +.....+.+.++++.+. +..
T Consensus 204 ~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~ 283 (361)
T 2oiz_A 204 FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKF 283 (361)
T ss_dssp CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTC
T ss_pred EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccC
Confidence 0011122222211100 00000011223334443 333
Q ss_pred CCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEE
Q 022111 183 CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVW 262 (302)
Q Consensus 183 ~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~ 262 (302)
..+.|.+||+.+. +.+.++..+. +.+|+|+||+ ++|++++. ++|.+||..+...... ..........+
T Consensus 284 ~~~~v~viD~~t~----~~v~~i~~~~--p~~ia~spdg----~~l~v~n~-~~v~v~D~~t~~l~~~-~~i~~~G~~P~ 351 (361)
T 2oiz_A 284 PAAEIWVMDTKTK----QRVARIPGRD--ALSMTIDQQR----NLMLTLDG-GNVNVYDISQPEPKLL-RTIEGAAEASL 351 (361)
T ss_dssp CCSEEEEEETTTT----EEEEEEECTT--CCEEEEETTT----TEEEEECS-SCEEEEECSSSSCEEE-EEETTSCSSEE
T ss_pred CCceEEEEECCCC----cEEEEEecCC--eeEEEECCCC----CEEEEeCC-CeEEEEECCCCcceee-EEeccCCCCcE
Confidence 1347999998776 3445555555 8999999996 67777776 9999999876410111 12234456688
Q ss_pred EEEEccCCC
Q 022111 263 SVSWSLTGN 271 (302)
Q Consensus 263 ~~~~spdg~ 271 (302)
.++++|||+
T Consensus 352 ~~~~~p~G~ 360 (361)
T 2oiz_A 352 QVQFHPVGG 360 (361)
T ss_dssp EEEECCCSC
T ss_pred EEEecCCCC
Confidence 899999985
No 187
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.41 E-value=1.7e-10 Score=110.57 Aligned_cols=253 Identities=14% Similarity=0.064 Sum_probs=146.0
Q ss_pred ccccceeEEEEccCCCEEEEeeCC-----CcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCe---
Q 022111 9 GHEDTVHDVAMDFYGKRLATASSD-----SSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQ--- 80 (302)
Q Consensus 9 ~h~~~v~~~~~s~~~~~l~s~~~d-----~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~--- 80 (302)
+|...+..++|||||++||.++.+ .+|++||+.++.. +. ...+...+..++|++ + +.|+.++.|+.
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~--~~-~~~~~~~~~~~~wsp--D-~~l~~~~~~~~~~~ 233 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKP--LA-DELKWVKFSGLAWLG--N-DALLYSRFAEPKEG 233 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCE--EE-EEEEEEESCCCEEST--T-SEEEEEECCCC---
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC--CC-ccCCCceeccEEEEC--C-CEEEEEEecCcccc
Confidence 455578889999999999877654 4699999876432 22 111222235788986 3 66777766554
Q ss_pred -----------EEEEEcCCCCc-eeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCC-----cEEEEEecCCCCee-ee
Q 022111 81 -----------VIIWKEGNQND-WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDG-----NISVFTATADGGWD-TT 142 (302)
Q Consensus 81 -----------i~iwd~~~~~~-~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~-----~v~~~~~~~~~~~~-~~ 142 (302)
|.+|++.+... ...+.....+...+..+.|+|| |++|+..+.++ .|.+||+.... .. ..
T Consensus 234 ~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpD--G~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~~~ 310 (741)
T 1yr2_A 234 QAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSD--GRWVVITSSEGTDPVNTVHVARVTNGK-IGPVT 310 (741)
T ss_dssp -----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTT--SCEEEEEEECTTCSCCEEEEEEEETTE-ECCCE
T ss_pred cccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCC--CCEEEEEEEccCCCcceEEEEECCCCC-CcccE
Confidence 88888865431 1223222333345889999998 66777666543 78888886431 01 12
Q ss_pred eecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeC----CCcEEEEEEecCccccccccccccCCCceeEEEee
Q 022111 143 RIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGC----DNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWA 218 (302)
Q Consensus 143 ~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~----D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~ 218 (302)
.+. .+...+.... +|+ ++.|+..+. ...|.+||+.++. . .....+..+...+.+++|+
T Consensus 311 ~l~-~~~~~~~~~~-~~d--------------g~~l~~~s~~~~~~~~l~~~d~~~~~-~-~~~~l~~~~~~~l~~~~~~ 372 (741)
T 1yr2_A 311 ALI-PDLKAQWDFV-DGV--------------GDQLWFVSGDGAPLKKIVRVDLSGST-P-RFDTVVPESKDNLESVGIA 372 (741)
T ss_dssp EEE-CSSSSCEEEE-EEE--------------TTEEEEEECTTCTTCEEEEEECSSSS-C-EEEEEECCCSSEEEEEEEE
T ss_pred Eec-CCCCceEEEE-ecc--------------CCEEEEEECCCCCCCEEEEEeCCCCc-c-ccEEEecCCCCeEEEEEEE
Confidence 222 2223333332 243 345555444 3458889887631 0 0111123345567778887
Q ss_pred CCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEe-cC---C-ceEEeeecCCceEE
Q 022111 219 PNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVA-DA---N-NVTLWKEAVDGEWQ 293 (302)
Q Consensus 219 p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~-~~---d-~i~~w~~~~~~~~~ 293 (302)
. +..+++...|+..+||.+...+.. ...+.......+..++++|+++.|+.. ++ . .|.+|+... +...
T Consensus 373 ~-----~~lv~~~~~dg~~~l~~~~~~g~~-~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t-g~~~ 445 (741)
T 1yr2_A 373 G-----NRLFASYIHDAKSQVLAFDLDGKP-AGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPAT-AKTT 445 (741)
T ss_dssp B-----TEEEEEEEETTEEEEEEEETTSCE-EEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTT-TEEE
T ss_pred C-----CEEEEEEEECCEEEEEEEeCCCCc-eeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC-CcEE
Confidence 2 367889999999888877532221 112212224568899999999766533 21 2 588888753 4444
Q ss_pred Ee
Q 022111 294 QV 295 (302)
Q Consensus 294 ~~ 295 (302)
..
T Consensus 446 ~l 447 (741)
T 1yr2_A 446 PW 447 (741)
T ss_dssp EC
T ss_pred EE
Confidence 43
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.38 E-value=2.2e-10 Score=109.25 Aligned_cols=235 Identities=10% Similarity=0.056 Sum_probs=137.7
Q ss_pred cCCCEEEEeeCC-Cc--EEEEeec--CCCceEEEE---e-cCcccCeEEEEeeCCCCCCEEEEEeCCC-----eEEEEEc
Q 022111 21 FYGKRLATASSD-SS--IKIIGLS--NSASQHLAT---L-KGHRGPVWQVAWAHPKFGSILASCSYDG-----QVIIWKE 86 (302)
Q Consensus 21 ~~~~~l~s~~~d-~~--v~lw~~~--~~~~~~~~~---~-~~h~~~v~~v~~~~~~~~~~l~s~s~D~-----~i~iwd~ 86 (302)
|+|++++-...+ +. -.||-.. .+..+.+.. + .+|...+..++|+|+ |++||.++.++ +|++||+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPD--g~~la~~~~~~G~~~~~i~v~d~ 158 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSED--GEYFAYGLSASGSDWVTIKFMKV 158 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTT--SSEEEEEEEETTCSCEEEEEEET
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCC--CCEEEEEEcCCCCceEEEEEEEC
Confidence 788877644432 22 2455443 222222211 1 235456788999864 88888765543 8999999
Q ss_pred CCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCc----------------EEEEEecCCCCeeeeeec-ccCC
Q 022111 87 GNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN----------------ISVFTATADGGWDTTRID-QAHP 149 (302)
Q Consensus 87 ~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~----------------v~~~~~~~~~~~~~~~~~-~~h~ 149 (302)
.++... . ..+. ...+..++|+|| |..|+.++.++. |++|++.+.......... ..|.
T Consensus 159 ~tg~~~-~-~~~~--~~~~~~~~wspD--g~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~ 232 (710)
T 2xdw_A 159 DGAKEL-P-DVLE--RVKFSCMAWTHD--GKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEP 232 (710)
T ss_dssp TTTEEE-E-EEEE--EECSCCEEECTT--SSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCT
T ss_pred CCCCCC-c-cccc--CcccceEEEEeC--CCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCC
Confidence 775321 1 1222 223678999998 668888887765 889988643221111111 1244
Q ss_pred CCeEEEEeCCCCCCCceeecccCCCceeEEEeeC-----CCcEEEEEEec------CccccccccccccCCCceeEEEee
Q 022111 150 VGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGC-----DNTVKVWKMYN------GIWKMDCFPALQMHSDWVRSVAWA 218 (302)
Q Consensus 150 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~-----D~~v~iwd~~~------~~~~~~~~~~~~~h~~~v~~v~~~ 218 (302)
..+..+.|+|++ ++|+..+. +..|++||+.+ +.. ....+..+...+.. .|+
T Consensus 233 ~~~~~~~~SpDg--------------~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~---~~~~l~~~~~~~~~-~~s 294 (710)
T 2xdw_A 233 KWMGGAELSDDG--------------RYVLLSIREGCDPVNRLWYCDLQQESNGITGIL---KWVKLIDNFEGEYD-YVT 294 (710)
T ss_dssp TCEEEEEECTTS--------------CEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC---CCEEEECSSSSCEE-EEE
T ss_pred eEEEEEEEcCCC--------------CEEEEEEEccCCCccEEEEEECcccccccCCcc---ceEEeeCCCCcEEE-EEe
Confidence 557788999874 56655543 56899999875 321 12334455555555 488
Q ss_pred CCCCCCccEEEEEec-C---CeEEEEEeccCCc-ceeeeeeccCC-CcEEEEEEccCCCEEEEecCC-c--eEEeee
Q 022111 219 PNLGLPKSTIASASQ-D---GTVVIWTCAKEGE-QWEGRVLKDFK-TPVWSVSWSLTGNLLAVADAN-N--VTLWKE 286 (302)
Q Consensus 219 p~~~~~~~~l~s~s~-D---~~i~iwd~~~~~~-~~~~~~~~~~~-~~v~~~~~spdg~~la~~~~d-~--i~~w~~ 286 (302)
|++ ..|+..+. + ..|.+||+..... .+. .+..... ..+.+++|++++.+++++..+ . |.+|+.
T Consensus 295 ~dg----~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~ 366 (710)
T 2xdw_A 295 NEG----TVFTFKTNRHSPNYRLINIDFTDPEESKWK-VLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDL 366 (710)
T ss_dssp EET----TEEEEEECTTCTTCEEEEEETTSCCGGGCE-EEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEET
T ss_pred ccC----CEEEEEECCCCCCCEEEEEeCCCCCcccce-eccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEEC
Confidence 885 44444443 3 3688888865321 122 2222222 358889999877788777666 3 555554
No 189
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.37 E-value=6.8e-09 Score=87.42 Aligned_cols=239 Identities=8% Similarity=0.000 Sum_probs=153.3
Q ss_pred ccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCC
Q 022111 11 EDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQN 90 (302)
Q Consensus 11 ~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~ 90 (302)
...+.+++++++++.+++...++.|..|+... ... ...+..+...+..+++.+ +++++++...++.|..||. ++.
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~-~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~i~~~d~-~g~ 130 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKG-IIK-EYTLPNPDSAPYGITEGP--NGDIWFTEMNGNRIGRITD-DGK 130 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTS-CEE-EEECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEECT-TCC
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCC-cEE-EEeCCCcCCCceeeEECC--CCCEEEEecCCceEEEECC-CCC
Confidence 45688899999998888776688899998652 221 222333455688899865 3778777777889999987 332
Q ss_pred ceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecc
Q 022111 91 DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLG 170 (302)
Q Consensus 91 ~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 170 (302)
. ...........+..+++.|+ +.++++...++.|..|+. .+........ .+...+..+++.++
T Consensus 131 -~-~~~~~~~~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~~--~g~~~~~~~~-~~~~~~~~i~~~~~---------- 193 (299)
T 2z2n_A 131 -I-REYELPNKGSYPSFITLGSD--NALWFTENQNNAIGRITE--SGDITEFKIP-TPASGPVGITKGND---------- 193 (299)
T ss_dssp -E-EEEECSSTTCCEEEEEECTT--SCEEEEETTTTEEEEECT--TCCEEEEECS-STTCCEEEEEECTT----------
T ss_pred -E-EEecCCCCCCCCceEEEcCC--CCEEEEeCCCCEEEEEcC--CCcEEEeeCC-CCCCcceeEEECCC----------
Confidence 1 11223334567899999887 556666666788888876 2222221111 22334566776654
Q ss_pred cCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCccee
Q 022111 171 LLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWE 250 (302)
Q Consensus 171 ~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~ 250 (302)
+.++++...++.|.+||. ++.. .. ..+..+...+.++++.|++ +..++...++.|..||... . ..
T Consensus 194 ----g~l~v~~~~~~~i~~~~~-~g~~--~~-~~~~~~~~~~~~i~~~~~g----~l~v~~~~~~~i~~~d~~g--~-~~ 258 (299)
T 2z2n_A 194 ----DALWFVEIIGNKIGRITT-SGEI--TE-FKIPTPNARPHAITAGAGI----DLWFTEWGANKIGRLTSNN--I-IE 258 (299)
T ss_dssp ----SSEEEEETTTTEEEEECT-TCCE--EE-EECSSTTCCEEEEEECSTT----CEEEEETTTTEEEEEETTT--E-EE
T ss_pred ----CCEEEEccCCceEEEECC-CCcE--EE-EECCCCCCCceeEEECCCC----CEEEeccCCceEEEECCCC--c-eE
Confidence 356666666788999998 4421 11 1122345678999999985 5566665788999999732 1 11
Q ss_pred eeeeccCCCcEEEEEEccCCCEEEEecCCceEEeeec
Q 022111 251 GRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEA 287 (302)
Q Consensus 251 ~~~~~~~~~~v~~~~~spdg~~la~~~~d~i~~w~~~ 287 (302)
..........+.++++ ++|++.++...+++..++..
T Consensus 259 ~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~ 294 (299)
T 2z2n_A 259 EYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLI 294 (299)
T ss_dssp EEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC
T ss_pred EEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcC
Confidence 1112233456899999 99988877766678877754
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.37 E-value=3.2e-10 Score=95.65 Aligned_cols=232 Identities=13% Similarity=0.036 Sum_probs=145.4
Q ss_pred CCCEEEEeeCCCcEEEEeecCCCceEEEEecCcc-cCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecC
Q 022111 22 YGKRLATASSDSSIKIIGLSNSASQHLATLKGHR-GPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND 100 (302)
Q Consensus 22 ~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~-~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~ 100 (302)
.++.|++++.|+.|++||..+ ++.+.++..+. ..+.++.+.++ |++|+ +.++.|..||. ++. .+.++..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~t--G~~~w~~~~~~~~~~~~~~~~pd--G~ilv--s~~~~V~~~d~-~G~---~~W~~~~ 73 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDT--KEIVWEYPLEKGWECNSVAATKA--GEILF--SYSKGAKMITR-DGR---ELWNIAA 73 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTT--TEEEEEEECCTTCCCCEEEECTT--SCEEE--ECBSEEEEECT-TSC---EEEEEEC
T ss_pred CCcEEEeeCCCCEEEEEECCC--CeEEEEeCCCccCCCcCeEECCC--CCEEE--eCCCCEEEECC-CCC---EEEEEcC
Confidence 367899999999999999744 45666776655 46778888763 88888 45788999998 442 4455554
Q ss_pred C-CCCeeEEEecCCCCCcEEEEEec-CCcEEEEEecCCCCee-eeeecc---cCCCCeEEEEeCCCCCCCceeecccCCC
Q 022111 101 H-KSSVNSIAWAPHELGLSLACGSS-DGNISVFTATADGGWD-TTRIDQ---AHPVGVTSVSWAPAMAPGALVGLGLLDP 174 (302)
Q Consensus 101 h-~~~i~~l~~~pd~~~~~l~sg~~-d~~v~~~~~~~~~~~~-~~~~~~---~h~~~v~~~~~~~~~~~~~~~~~~~~~~ 174 (302)
+ ...+.++.+.|+ |.++++.+. ++.+..++ ..+... ...+.. .+......+... .+
T Consensus 74 ~~~~~~~~~~~~~d--G~~lv~~~~~~~~v~~vd--~~Gk~l~~~~~~~~~~~~~~~~~~v~~~--------------~~ 135 (276)
T 3no2_A 74 PAGCEMQTARILPD--GNALVAWCGHPSTILEVN--MKGEVLSKTEFETGIERPHAQFRQINKN--------------KK 135 (276)
T ss_dssp CTTCEEEEEEECTT--SCEEEEEESTTEEEEEEC--TTSCEEEEEEECCSCSSGGGSCSCCEEC--------------TT
T ss_pred CCCccccccEECCC--CCEEEEecCCCCEEEEEe--CCCCEEEEEeccCCCCcccccccCceEC--------------CC
Confidence 4 346788889887 667887766 55555444 333211 111110 000111112222 34
Q ss_pred ceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeee
Q 022111 175 VQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVL 254 (302)
Q Consensus 175 ~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~ 254 (302)
+.++++...++.|..||.. +.. +-.+... ....++...|++ +.+++++.++.|..+|..+.+..|+....
T Consensus 136 G~~lv~~~~~~~v~~~d~~-G~~----~w~~~~~-~~~~~~~~~~~g----~~~v~~~~~~~v~~~d~~tG~~~w~~~~~ 205 (276)
T 3no2_A 136 GNYLVPLFATSEVREIAPN-GQL----LNSVKLS-GTPFSSAFLDNG----DCLVACGDAHCFVQLNLESNRIVRRVNAN 205 (276)
T ss_dssp SCEEEEETTTTEEEEECTT-SCE----EEEEECS-SCCCEEEECTTS----CEEEECBTTSEEEEECTTTCCEEEEEEGG
T ss_pred CCEEEEecCCCEEEEECCC-CCE----EEEEECC-CCccceeEcCCC----CEEEEeCCCCeEEEEeCcCCcEEEEecCC
Confidence 6789999999999999986 532 1222221 345667777774 77888888889999998755444432211
Q ss_pred --cc-CCCcEEEEEEccCCCEEEEecC---------CceEEeeecCCce
Q 022111 255 --KD-FKTPVWSVSWSLTGNLLAVADA---------NNVTLWKEAVDGE 291 (302)
Q Consensus 255 --~~-~~~~v~~~~~spdg~~la~~~~---------d~i~~w~~~~~~~ 291 (302)
.+ .-..+.+++..++|+++++... +..++++...+|.
T Consensus 206 ~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~ 254 (276)
T 3no2_A 206 DIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGK 254 (276)
T ss_dssp GSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSB
T ss_pred CCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCC
Confidence 11 1123678888999999988732 2346666644555
No 191
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.35 E-value=2e-10 Score=109.30 Aligned_cols=239 Identities=12% Similarity=0.016 Sum_probs=140.9
Q ss_pred ccCCCEEEEeeCCC---cEEEEeec--CCCceEEEEe----cCcccCeEEEEeeCCCCCCEEE-----EEeCCCeEEEEE
Q 022111 20 DFYGKRLATASSDS---SIKIIGLS--NSASQHLATL----KGHRGPVWQVAWAHPKFGSILA-----SCSYDGQVIIWK 85 (302)
Q Consensus 20 s~~~~~l~s~~~d~---~v~lw~~~--~~~~~~~~~~----~~h~~~v~~v~~~~~~~~~~l~-----s~s~D~~i~iwd 85 (302)
+++|++++-...++ .-.||-.. .+..+.+... .+|...+..++|+|+ |++|| +|+.+.+|++||
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPD--G~~la~~~~~~G~~~~~i~v~d 153 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWD--GKKVAFAQKPNAADEAVLHVID 153 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTT--SSEEEEEEEETTCSCCEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCC--CCEEEEEECCCCCceEEEEEEE
Confidence 47888887666544 35566553 2222222221 246657889999864 88888 455567899999
Q ss_pred cCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCc-------------EEEEEecCCCCeeeeee-cccCCCC
Q 022111 86 EGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN-------------ISVFTATADGGWDTTRI-DQAHPVG 151 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~-------------v~~~~~~~~~~~~~~~~-~~~h~~~ 151 (302)
+.++.... ...+.. .....++|+|| |..|+.++.|.. |++|++.+......... ...|...
T Consensus 154 l~tg~~~~-~~~~~~--~~~~~~~wspD--g~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~ 228 (695)
T 2bkl_A 154 VDSGEWSK-VDVIEG--GKYATPKWTPD--SKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTT 228 (695)
T ss_dssp TTTCCBCS-SCCBSC--CTTCCCEECTT--SSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTC
T ss_pred CCCCCCcC-CcccCc--ccccceEEecC--CCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEE
Confidence 98764210 011111 11268999998 678888888776 99998865432111111 1134456
Q ss_pred eEEEEeCCCCCCCceeecccCCCceeEEEeeCCC----cEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccE
Q 022111 152 VTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN----TVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKST 227 (302)
Q Consensus 152 v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~----~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~ 227 (302)
+..+.|+|++ ++|+..+.++ .|+++|..++. ...+..+...+....| |++ ..
T Consensus 229 ~~~~~~SpDG--------------~~l~~~~~~~~~~~~l~~~~~~~~~-----~~~l~~~~~~~~~~~~-~~g----~l 284 (695)
T 2bkl_A 229 FLQSDLSRDG--------------KYLFVYILRGWSENDVYWKRPGEKD-----FRLLVKGVGAKYEVHA-WKD----RF 284 (695)
T ss_dssp EEEEEECTTS--------------CCEEEEEEETTTEEEEEEECTTCSS-----CEEEEECSSCCEEEEE-ETT----EE
T ss_pred EEEEEECCCC--------------CEEEEEEeCCCCceEEEEEcCCCCc-----eEEeecCCCceEEEEe-cCC----cE
Confidence 7889999874 5666665544 45555432221 2234445555666666 554 44
Q ss_pred EEEEe---cCCeEEEEEeccCCc-ceeeeeeccC-CCcEEEEEEccCCCEEEEecCC-ceEEeeecCCce
Q 022111 228 IASAS---QDGTVVIWTCAKEGE-QWEGRVLKDF-KTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGE 291 (302)
Q Consensus 228 l~s~s---~D~~i~iwd~~~~~~-~~~~~~~~~~-~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~ 291 (302)
+++.. .++.|.+||+..... .|. .+.... ...+.+++|+ ++.+++++..+ ..+||.....|.
T Consensus 285 ~~~s~~~~~~~~l~~~d~~~~~~~~~~-~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~ 352 (695)
T 2bkl_A 285 YVLTDEGAPRQRVFEVDPAKPARASWK-EIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGK 352 (695)
T ss_dssp EEEECTTCTTCEEEEEBTTBCSGGGCE-EEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred EEEECCCCCCCEEEEEeCCCCCccCCe-EEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCC
Confidence 44444 257899999865321 122 222332 4457888998 66777777766 577776653343
No 192
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.34 E-value=5.1e-10 Score=94.95 Aligned_cols=206 Identities=13% Similarity=0.083 Sum_probs=128.9
Q ss_pred EEecCcccCeEEEEeeCCCCCC-EEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCc
Q 022111 49 ATLKGHRGPVWQVAWAHPKFGS-ILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127 (302)
Q Consensus 49 ~~~~~h~~~v~~v~~~~~~~~~-~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~ 127 (302)
..+..+.....+++|+++ ++ +++++..++.|..|+.... ...+..+...+.+++++|+ +.++++...++.
T Consensus 21 ~~l~~~~~~~eg~~~d~~--g~~l~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~l~~~~d--g~l~v~~~~~~~ 91 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPA--RSAVIFSDVRQNRTWAWSDDGQ-----LSPEMHPSHHQNGHCLNKQ--GHLIACSHGLRR 91 (296)
T ss_dssp EEEECCCSSEEEEEEEGG--GTEEEEEEGGGTEEEEEETTSC-----EEEEESSCSSEEEEEECTT--CCEEEEETTTTE
T ss_pred EEEecCCccccCCeEeCC--CCEEEEEeCCCCEEEEEECCCC-----eEEEECCCCCcceeeECCC--CcEEEEecCCCe
Confidence 344455556778999864 66 7888889999999998653 2344556778999999997 667777666789
Q ss_pred EEEEEecCCCCeeee-eeccc-CCCCeEEEEeCCCCCCCceeecccCCCceeEEE----eeCC-----------CcEEEE
Q 022111 128 ISVFTATADGGWDTT-RIDQA-HPVGVTSVSWAPAMAPGALVGLGLLDPVQKLAS----CGCD-----------NTVKVW 190 (302)
Q Consensus 128 v~~~~~~~~~~~~~~-~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s----~~~D-----------~~v~iw 190 (302)
|.+|+..+.. .... ..... ....+..++++|+ +.++++ |+.+ +.-.||
T Consensus 92 i~~~d~~~g~-~~~~~~~~~~~~~~~~~~i~~d~~--------------G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~ 156 (296)
T 3e5z_A 92 LERQREPGGE-WESIADSFEGKKLNSPNDVCLAPD--------------GSLWFSDPTYGIDKPEEGYGGEMELPGRWVF 156 (296)
T ss_dssp EEEECSTTCC-EEEEECEETTEECCCCCCEEECTT--------------SCEEEEECSHHHHCGGGSSCCCCCSSSCEEE
T ss_pred EEEEcCCCCc-EEEEeeccCCCCCCCCCCEEECCC--------------CCEEEECCccccccccccccccccCCCcEEE
Confidence 9999874332 2211 10001 1123445666664 456666 3210 122455
Q ss_pred EEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcc-eeeeeeccCCCcEEEEEEccC
Q 022111 191 KMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQ-WEGRVLKDFKTPVWSVSWSLT 269 (302)
Q Consensus 191 d~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~spd 269 (302)
.+.... . ...+..+....+.++|+|++ +.+++.+.++.|++|++...+.. ............+.+++++++
T Consensus 157 ~~~~~g-~---~~~~~~~~~~~~gi~~s~dg----~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~ 228 (296)
T 3e5z_A 157 RLAPDG-T---LSAPIRDRVKPNGLAFLPSG----NLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAG 228 (296)
T ss_dssp EECTTS-C---EEEEECCCSSEEEEEECTTS----CEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTT
T ss_pred EECCCC-C---EEEeecCCCCCccEEECCCC----CEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCC
Confidence 544321 1 12233455667899999996 56688888999999998632221 111122222344678999999
Q ss_pred CCEEEEecCCceEEeeec
Q 022111 270 GNLLAVADANNVTLWKEA 287 (302)
Q Consensus 270 g~~la~~~~d~i~~w~~~ 287 (302)
|+++++. .++|.+|+..
T Consensus 229 G~l~v~~-~~~v~~~~~~ 245 (296)
T 3e5z_A 229 GLIWASA-GDGVHVLTPD 245 (296)
T ss_dssp SCEEEEE-TTEEEEECTT
T ss_pred CCEEEEc-CCeEEEECCC
Confidence 9987777 5589999864
No 193
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.29 E-value=1.2e-10 Score=102.48 Aligned_cols=177 Identities=11% Similarity=0.037 Sum_probs=120.5
Q ss_pred CeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCC--------ceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcE
Q 022111 57 PVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQN--------DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNI 128 (302)
Q Consensus 57 ~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~--------~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v 128 (302)
.+..+++++. ..++++|+.++ +++|+..+.. ...+.... .+.. |..++| | +..|+++ .++.|
T Consensus 39 ~~nlLais~~--~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d--~~~L~v~-~~~~l 108 (388)
T 1xip_A 39 SLQNLDISNS--KSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--H--GDQVLVS-TRNAL 108 (388)
T ss_dssp CCBCEEEETT--TTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--E--TTEEEEE-ESSEE
T ss_pred cccEEEEcCC--CCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--C--CCEEEEE-cCCcE
Confidence 5778888764 56888988874 5669864321 01111122 2555 999999 5 5678888 88999
Q ss_pred EEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccC
Q 022111 129 SVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMH 208 (302)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h 208 (302)
++||+....... .. ..|...+.++.+.+. .+++++.||.|.+||++++... .+
T Consensus 109 ~v~dv~sl~~~~--~~-~~~~~~v~~i~~~~p----------------~~av~~~dG~L~v~dl~~~~~~--------~~ 161 (388)
T 1xip_A 109 YSLDLEELSEFR--TV-TSFEKPVFQLKNVNN----------------TLVILNSVNDLSALDLRTKSTK--------QL 161 (388)
T ss_dssp EEEESSSTTCEE--EE-EECSSCEEEEEECSS----------------EEEEEETTSEEEEEETTTCCEE--------EE
T ss_pred EEEEchhhhccC--cc-ceeecceeeEEecCC----------------CEEEEECCCCEEEEEccCCccc--------cc
Confidence 999987543222 12 245666777766531 3888999999999999865311 14
Q ss_pred CCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeee-----ec---cCCCcEEEEEEccCCCEEEEe
Q 022111 209 SDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRV-----LK---DFKTPVWSVSWSLTGNLLAVA 276 (302)
Q Consensus 209 ~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~-----~~---~~~~~v~~~~~spdg~~la~~ 276 (302)
...|.|++|||+| ++.|..||++++|+...........+ +. ++...|.+|.|.+++.++++-
T Consensus 162 ~~~Vs~v~WSpkG------~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 162 AQNVTSFDVTNSQ------LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EESEEEEEECSSE------EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred cCCceEEEEcCCc------eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 5679999999984 78899999999998864320001112 12 245779999999999988763
No 194
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.29 E-value=5.5e-08 Score=81.82 Aligned_cols=246 Identities=9% Similarity=-0.022 Sum_probs=154.8
Q ss_pred ccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCC
Q 022111 11 EDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQN 90 (302)
Q Consensus 11 ~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~ 90 (302)
...+.+++++++|+.+++...++.|.+|+.. ..... ..+..+...+..+++.+ +++++++...++.|..+|.. +.
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FEVPTPDAKVMCLIVSS--LGDIWFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEECTT-SC
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EECCCCCCcceeEEECC--CCCEEEEecCCCeEEEECCC-CC
Confidence 4577889999999988877678999999876 32222 22333445688898864 37777776668889999876 32
Q ss_pred ceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecc
Q 022111 91 DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLG 170 (302)
Q Consensus 91 ~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 170 (302)
. ...........+.++++.|+ +.++++...++.|..++.. +......+. .....+..+.+.++
T Consensus 94 -~-~~~~~~~~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~~~--g~~~~~~~~-~~~~~~~~i~~d~~---------- 156 (300)
T 2qc5_A 94 -F-TEYPLPQPDSGPYGITEGLN--GDIWFTQLNGDRIGKLTAD--GTIYEYDLP-NKGSYPAFITLGSD---------- 156 (300)
T ss_dssp -E-EEEECSSTTCCEEEEEECST--TCEEEEETTTTEEEEECTT--SCEEEEECS-STTCCEEEEEECTT----------
T ss_pred -e-EEecCCCCCCCCccceECCC--CCEEEEccCCCeEEEECCC--CCEEEccCC-CCCCCceeEEECCC----------
Confidence 2 12223323467889999876 5566666667788888754 222212111 12334566776654
Q ss_pred cCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCccee
Q 022111 171 LLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWE 250 (302)
Q Consensus 171 ~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~ 250 (302)
+..+++...++.|..+|. ++... . .....+...+.++++.|++ +..++....+.|.+||.... ..
T Consensus 157 ----g~l~v~~~~~~~i~~~~~-~g~~~--~-~~~~~~~~~~~~i~~d~~g----~l~v~~~~~~~i~~~~~~g~---~~ 221 (300)
T 2qc5_A 157 ----NALWFTENQNNSIGRITN-TGKLE--E-YPLPTNAAAPVGITSGNDG----ALWFVEIMGNKIGRITTTGE---IS 221 (300)
T ss_dssp ----SSEEEEETTTTEEEEECT-TCCEE--E-EECSSTTCCEEEEEECTTS----SEEEEETTTTEEEEECTTCC---EE
T ss_pred ----CCEEEEecCCCeEEEECC-CCcEE--E-eeCCCCCCCcceEEECCCC----CEEEEccCCCEEEEEcCCCc---EE
Confidence 355666666778888887 33211 1 1122334568899999875 56666666778999987321 11
Q ss_pred eeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCceEEEe
Q 022111 251 GRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQV 295 (302)
Q Consensus 251 ~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~~~~~ 295 (302)
..........+.+++++++|++.++...+ .|..++. .+.....
T Consensus 222 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~--~g~~~~~ 265 (300)
T 2qc5_A 222 EYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN--DNTIQEY 265 (300)
T ss_dssp EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT--TSCEEEE
T ss_pred EEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC--CCcEEEE
Confidence 11122233568899999999977666544 7999986 3555444
No 195
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.28 E-value=8.2e-09 Score=91.99 Aligned_cols=237 Identities=8% Similarity=-0.019 Sum_probs=143.1
Q ss_pred ceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCC--eEEEEEcCCCC
Q 022111 13 TVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDG--QVIIWKEGNQN 90 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~--~i~iwd~~~~~ 90 (302)
....++|+++++++++...++.|++|+........ .... ..... ++|+++ ++.|+.+..++ .|.+++.....
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~--~~~~-~~~~~-ia~~~~--g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTT--VHPG-FKGGK-PAVTKD--KQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEE--EEET-CCBCB-CEECTT--SSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEE--eecc-CCCCc-eeEecC--CCcEEEEecCCCceEEEEEcCCCc
Confidence 56789999999877777777999999986533222 2222 22223 788754 67777777755 78888875443
Q ss_pred ceeEEEEecC-CCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeee-ee-cccCCCCe--EEEEeCCCCCCCc
Q 022111 91 DWTQAHTFND-HKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTT-RI-DQAHPVGV--TSVSWAPAMAPGA 165 (302)
Q Consensus 91 ~~~~~~~~~~-h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~-~~-~~~h~~~v--~~~~~~~~~~~~~ 165 (302)
.......+.. ....+.+++++|+. +. |..+..++.|+.|+..... .... .. ..++.... ..++|+|+.
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~-g~-lyv~d~~~~I~~~d~~~~~-~~~~~~~~~~g~~~~~P~~~ia~~p~~---- 278 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETE-EW-LYFVDSNKNFGRFNVKTQE-VTLIKQLELSGSLGTNPGPYLIYYFVD---- 278 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTS-SE-EEEECTTCEEEEEETTTCC-EEEEEECCCCSCCCCSSCCEEEEETTT----
T ss_pred eeEEeeeccchhcCCcEEEEEeCCC-Ce-EEEEECCCcEEEEECCCCC-EEEEecccccCCCCCCccccEEEeCCC----
Confidence 2112212222 44567889999953 44 4446677889888875332 2111 00 11111111 277777742
Q ss_pred eeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccC---------------CCceeEEEeeCCCCCCccEEEE
Q 022111 166 LVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMH---------------SDWVRSVAWAPNLGLPKSTIAS 230 (302)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h---------------~~~v~~v~~~p~~~~~~~~l~s 230 (302)
+.++++-...+.|+.||..... . .+.++ -.....++++|++ +.+++
T Consensus 279 ---------g~lyv~d~~~~~I~~~~~~g~~---~---~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG----~lyva 339 (409)
T 3hrp_A 279 ---------SNFYMSDQNLSSVYKITPDGEC---E---WFCGSATQKTVQDGLREEALFAQPNGMTVDEDG----NFYIV 339 (409)
T ss_dssp ---------TEEEEEETTTTEEEEECTTCCE---E---EEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC----CEEEE
T ss_pred ---------CEEEEEeCCCCEEEEEecCCCE---E---EEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC----CEEEE
Confidence 4677777778889988865321 1 11111 1347889999985 67778
Q ss_pred Ee-cCCeEEEEEeccCCcceeeeeeccC---------------CCcEEEEEEccCCCEEEEecCC-ceEEee
Q 022111 231 AS-QDGTVVIWTCAKEGEQWEGRVLKDF---------------KTPVWSVSWSLTGNLLAVADAN-NVTLWK 285 (302)
Q Consensus 231 ~s-~D~~i~iwd~~~~~~~~~~~~~~~~---------------~~~v~~~~~spdg~~la~~~~d-~i~~w~ 285 (302)
-+ .++.|+.|++.... . ....+. -.....++++|+|+++++-..+ .|+.+.
T Consensus 340 d~~~~~~I~~~~~~~G~-v---~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~ 407 (409)
T 3hrp_A 340 DGFKGYCLRKLDILDGY-V---STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYA 407 (409)
T ss_dssp ETTTTCEEEEEETTTTE-E---EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEE
T ss_pred eCCCCCEEEEEECCCCE-E---EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEE
Confidence 77 88999999954321 1 111111 1357899999998776665544 566654
No 196
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.28 E-value=2.2e-10 Score=100.78 Aligned_cols=177 Identities=14% Similarity=0.051 Sum_probs=124.5
Q ss_pred ceeEEEEccCCCEEEEeeCCCcEEEEeecCCC---------ceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEE
Q 022111 13 TVHDVAMDFYGKRLATASSDSSIKIIGLSNSA---------SQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~---------~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~i 83 (302)
.++.+++++...++++|+.++ +++|++.... .+... ...+.. |++|+| + +++|+++ .++.|++
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~-~~~lp~-V~~l~f--d--~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKW-EKEIPD-VIFVCF--H--GDQVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSE-EEECTT-EEEEEE--E--TTEEEEE-ESSEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceE-EeeCCC-eeEEEE--C--CCEEEEE-cCCcEEE
Confidence 578899999999999999875 6679864211 11111 223566 999999 2 6888888 8899999
Q ss_pred EEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCC
Q 022111 84 WKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAP 163 (302)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 163 (302)
||+++... ......|..++.++.+.+. .++.+..||.+.+|++..... .. +...|++++|+|.
T Consensus 111 ~dv~sl~~---~~~~~~~~~~v~~i~~~~p----~~av~~~dG~L~v~dl~~~~~---~~----~~~~Vs~v~WSpk--- 173 (388)
T 1xip_A 111 LDLEELSE---FRTVTSFEKPVFQLKNVNN----TLVILNSVNDLSALDLRTKST---KQ----LAQNVTSFDVTNS--- 173 (388)
T ss_dssp EESSSTTC---EEEEEECSSCEEEEEECSS----EEEEEETTSEEEEEETTTCCE---EE----EEESEEEEEECSS---
T ss_pred EEchhhhc---cCccceeecceeeEEecCC----CEEEEECCCCEEEEEccCCcc---cc----ccCCceEEEEcCC---
Confidence 99876542 2234456778888877653 388899999999999874432 11 2346999999985
Q ss_pred CceeecccCCCceeEEEeeCCCcEEEEEEecCcc--c--cccccccc---cCCCceeEEEeeCCCCCCccEEEEE
Q 022111 164 GALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIW--K--MDCFPALQ---MHSDWVRSVAWAPNLGLPKSTIASA 231 (302)
Q Consensus 164 ~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~--~--~~~~~~~~---~h~~~v~~v~~~p~~~~~~~~l~s~ 231 (302)
| ++.|..||++++|+...... + +.+-..+. +|...|.+|.|.+++ .++++-
T Consensus 174 -----------G--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~----~flv~y 231 (388)
T 1xip_A 174 -----------Q--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ----DFLAVF 231 (388)
T ss_dssp -----------E--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSS----EEEEEE
T ss_pred -----------c--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCC----eEEEEE
Confidence 2 67889999999998876531 1 11111122 478899999999874 666663
No 197
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.25 E-value=2.2e-08 Score=92.82 Aligned_cols=250 Identities=14% Similarity=0.101 Sum_probs=152.4
Q ss_pred ceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeC---CCCCCEEEEEe-CCCeEEEEEcCC
Q 022111 13 TVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH---PKFGSILASCS-YDGQVIIWKEGN 88 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~~~~l~s~s-~D~~i~iwd~~~ 88 (302)
.+..+.|+|||+++++++.|+.|.+||+...+.+.+..+..... -..++|++ + +|+++++++ .++++.++|..+
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P~~ia~s~~~~p-DGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-ARSIETSKMEGW-EDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-EEEEEECCSTTC-TTTEEEEEEEETTEEEEEETTT
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-CceeEEccccCC-CCCEEEEEEccCCeEEEEECCC
Confidence 45688999999999999999999999985223344555544333 46899983 3 377766554 569999999766
Q ss_pred CCceeEEEEecC----------C-CCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEe
Q 022111 89 QNDWTQAHTFND----------H-KSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSW 157 (302)
Q Consensus 89 ~~~~~~~~~~~~----------h-~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 157 (302)
.. .++++.. | ...+..+..+++. ...++....++.|.++|...........+. .......+.|
T Consensus 276 ~~---~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~-~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~--~~~~~~d~~~ 349 (567)
T 1qks_A 276 LE---PKKIQSTRGMTYDEQEYHPEPRVAAILASHYR-PEFIVNVKETGKILLVDYTDLNNLKTTEIS--AERFLHDGGL 349 (567)
T ss_dssp CC---EEEEEECCEECTTTCCEESCCCEEEEEECSSS-SEEEEEETTTTEEEEEETTCSSEEEEEEEE--CCSSEEEEEE
T ss_pred Cc---EEEEEeccccccccccccCCCceEEEEEcCCC-CEEEEEecCCCeEEEEecCCCccceeeeee--ccccccCceE
Confidence 53 3333221 2 2267788888874 345666677789988887543222222221 1223456677
Q ss_pred CCCCCCCceeecccCCCcee-EEEeeCCCcEEEEEEecCccccccccc--cccCCCceeEEEeeCCCCCCccEEEEEe-c
Q 022111 158 APAMAPGALVGLGLLDPVQK-LASCGCDNTVKVWKMYNGIWKMDCFPA--LQMHSDWVRSVAWAPNLGLPKSTIASAS-Q 233 (302)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~-l~s~~~D~~v~iwd~~~~~~~~~~~~~--~~~h~~~v~~v~~~p~~~~~~~~l~s~s-~ 233 (302)
+|++ ++ ++++..++.|.++|+.++... ..+.. -..|.+....+ ++|++ +...+++. .
T Consensus 350 ~pdg--------------r~~~va~~~sn~V~ViD~~t~kl~-~~i~vgg~~Phpg~g~~~-~~p~~---g~v~~t~~~g 410 (567)
T 1qks_A 350 DGSH--------------RYFITAANARNKLVVIDTKEGKLV-AIEDTGGQTPHPGRGANF-VHPTF---GPVWATSHMG 410 (567)
T ss_dssp CTTS--------------CEEEEEEGGGTEEEEEETTTTEEE-EEEECSSSSBCCTTCEEE-EETTT---EEEEEEEBSS
T ss_pred CCCC--------------CEEEEEeCCCCeEEEEECCCCcEE-EEEeccCcCCCCccceee-ECCCC---CcEEEeCCCC
Confidence 7754 44 455567889999999876422 11111 12354322222 57874 34455554 4
Q ss_pred CCeEEEEEeccCCcc---eee-eeeccCCCcEEEEEEccCCCEEEEecC--------CceEEeeecCC
Q 022111 234 DGTVVIWTCAKEGEQ---WEG-RVLKDFKTPVWSVSWSLTGNLLAVADA--------NNVTLWKEAVD 289 (302)
Q Consensus 234 D~~i~iwd~~~~~~~---~~~-~~~~~~~~~v~~~~~spdg~~la~~~~--------d~i~~w~~~~~ 289 (302)
+++|.++|....+.. |.. ..+......-.-++.+|++++|-+... ++|.++|....
T Consensus 411 ~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 411 DDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp SSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred CCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 689999998753211 221 112222222234788999998877652 37999998643
No 198
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.25 E-value=1.9e-09 Score=102.64 Aligned_cols=253 Identities=10% Similarity=0.020 Sum_probs=143.7
Q ss_pred ccccccceeEEEEccCCCEEE-----EeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCC--
Q 022111 7 ETGHEDTVHDVAMDFYGKRLA-----TASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDG-- 79 (302)
Q Consensus 7 ~~~h~~~v~~~~~s~~~~~l~-----s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~-- 79 (302)
..+|...+..++|||||++|| .|+...+|+++|+.++.... ..+.+ .....++|+ + ++.|+.++.+.
T Consensus 124 a~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~-~~~~~--~k~~~~~Ws-D--g~~l~y~~~~~~~ 197 (693)
T 3iuj_A 124 SPDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLE-TPLKD--VKFSGISWL-G--NEGFFYSSYDKPD 197 (693)
T ss_dssp STTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEE-EEEEE--EESCCCEEE-T--TTEEEEEESSCCC
T ss_pred cCCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCc-cccCC--ceeccEEEe-C--CCEEEEEEecCcc
Confidence 345667888999999999888 34444679999997654211 12221 112467898 5 77888888774
Q ss_pred -----------eEEEEEcCCCCc-eeEEEEecC-CCCCeeEEEecCCCCCcEEE-EEec---CCcEEEEEecCCC-Ceee
Q 022111 80 -----------QVIIWKEGNQND-WTQAHTFND-HKSSVNSIAWAPHELGLSLA-CGSS---DGNISVFTATADG-GWDT 141 (302)
Q Consensus 80 -----------~i~iwd~~~~~~-~~~~~~~~~-h~~~i~~l~~~pd~~~~~l~-sg~~---d~~v~~~~~~~~~-~~~~ 141 (302)
.|.+|++.+... ...+..... |...+..+.|+|| |.+|+ +.+. .+.|.++++.... .+
T Consensus 198 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~~i~~~d~~~~~~~~-- 273 (693)
T 3iuj_A 198 GSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTED--DRFLLISAANSTSGNRLYVKDLSQENAPL-- 273 (693)
T ss_dssp -------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTT--SCEEEEEEESSSSCCEEEEEETTSTTCCC--
T ss_pred cccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCC--CCEEEEEEccCCCCcEEEEEECCCCCCce--
Confidence 389998865432 123333333 4445778999998 55554 3332 2578888875432 22
Q ss_pred eeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCC---CcEEEEEEecCccccccccccccCCCceeEEEee
Q 022111 142 TRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD---NTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWA 218 (302)
Q Consensus 142 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D---~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~ 218 (302)
..+. .+....... |++++ +.+++....+ +.|.++|+.++.. .....+..|...+. .|+
T Consensus 274 ~~l~-~~~~~~~~~-~~~~g-------------~~l~~~t~~~~~~~~l~~~d~~~~~~--~~~~~l~~~~~~~~--~~s 334 (693)
T 3iuj_A 274 LTVQ-GDLDADVSL-VDNKG-------------STLYLLTNRDAPNRRLVTVDAANPGP--AHWRDLIPERQQVL--TVH 334 (693)
T ss_dssp EEEE-CSSSSCEEE-EEEET-------------TEEEEEECTTCTTCEEEEEETTSCCG--GGCEEEECCCSSCE--EEE
T ss_pred EEEe-CCCCceEEE-EeccC-------------CEEEEEECCCCCCCEEEEEeCCCCCc--cccEEEecCCCCEE--EEE
Confidence 2222 233333332 44432 3455555443 4677788765421 11234555665555 888
Q ss_pred CCCCCCccEEEE-EecCC--eEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEe-cC----CceEEeeecCCc
Q 022111 219 PNLGLPKSTIAS-ASQDG--TVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVA-DA----NNVTLWKEAVDG 290 (302)
Q Consensus 219 p~~~~~~~~l~s-~s~D~--~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~-~~----d~i~~w~~~~~~ 290 (302)
|++ +.|+. ...++ .|++|++... ....+.......+..++++|+++.|+.. ++ ..+..|+.. .+
T Consensus 335 ~~g----~~lv~~~~~~g~~~l~~~d~~g~---~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~-~g 406 (693)
T 3iuj_A 335 SGS----GYLFAEYMVDATARVEQFDYEGK---RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPK-SG 406 (693)
T ss_dssp EET----TEEEEEEEETTEEEEEEECTTSC---EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTT-TC
T ss_pred EEC----CEEEEEEEECCeeEEEEEECCCC---eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECC-CC
Confidence 885 44544 44565 5778876532 1122222333457788889988766554 33 257777764 34
Q ss_pred eEEEee
Q 022111 291 EWQQVS 296 (302)
Q Consensus 291 ~~~~~~ 296 (302)
.....+
T Consensus 407 ~~~~l~ 412 (693)
T 3iuj_A 407 AISLYR 412 (693)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 444443
No 199
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.23 E-value=1.5e-08 Score=87.44 Aligned_cols=234 Identities=8% Similarity=0.022 Sum_probs=136.9
Q ss_pred ceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCce
Q 022111 13 TVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDW 92 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~ 92 (302)
...++.++ +++..++...++.|.++|..+ .+.+.++.. ......++++++ ++++++...++.|.+||..+..
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t--~~~~~~i~~-~~~p~~i~~~~~--g~lyv~~~~~~~v~~iD~~t~~-- 116 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINT--FKEVGRITG-FTSPRYIHFLSD--EKAYVTQIWDYRIFIINPKTYE-- 116 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTT--CCEEEEEEC-CSSEEEEEEEET--TEEEEEEBSCSEEEEEETTTTE--
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcc--cEEEEEcCC-CCCCcEEEEeCC--CeEEEEECCCCeEEEEECCCCe--
Confidence 35667764 355555666679999999865 344455542 345788998654 6666665589999999987653
Q ss_pred eEEEEecCCC-----CCeeEEEecCCCCCcEEEEEe-cCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCce
Q 022111 93 TQAHTFNDHK-----SSVNSIAWAPHELGLSLACGS-SDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL 166 (302)
Q Consensus 93 ~~~~~~~~h~-----~~i~~l~~~pd~~~~~l~sg~-~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 166 (302)
....+.... .....+++ .+ +.++++.. .++.|.++|..+.... ..+.. ......+.++|+
T Consensus 117 -~~~~i~~g~~~~~~~~p~~i~~-~~--~~lyv~~~~~~~~v~viD~~t~~~~--~~i~~--g~~p~~i~~~~d------ 182 (328)
T 3dsm_A 117 -ITGYIECPDMDMESGSTEQMVQ-YG--KYVYVNCWSYQNRILKIDTETDKVV--DELTI--GIQPTSLVMDKY------ 182 (328)
T ss_dssp -EEEEEECTTCCTTTCBCCCEEE-ET--TEEEEEECTTCCEEEEEETTTTEEE--EEEEC--SSCBCCCEECTT------
T ss_pred -EEEEEEcCCccccCCCcceEEE-EC--CEEEEEcCCCCCEEEEEECCCCeEE--EEEEc--CCCccceEEcCC------
Confidence 233333222 14566777 22 44444443 4889999997643211 12211 112234445543
Q ss_pred eecccCCCceeEEEeeCC----------CcEEEEEEecCcccccccccccc-CCCceeEEEeeCCCCCCccEEEEEecCC
Q 022111 167 VGLGLLDPVQKLASCGCD----------NTVKVWKMYNGIWKMDCFPALQM-HSDWVRSVAWAPNLGLPKSTIASASQDG 235 (302)
Q Consensus 167 ~~~~~~~~~~~l~s~~~D----------~~v~iwd~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~~~~l~s~s~D~ 235 (302)
+++++++..+ +.|.++|..++.. ...+.. .......++|+|++ +.|..+..
T Consensus 183 --------G~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v----~~~~~~~~g~~p~~la~~~d~----~~lyv~~~-- 244 (328)
T 3dsm_A 183 --------NKMWTITDGGYEGSPYGYEAPSLYRIDAETFTV----EKQFKFKLGDWPSEVQLNGTR----DTLYWINN-- 244 (328)
T ss_dssp --------SEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEE----EEEEECCTTCCCEEEEECTTS----CEEEEESS--
T ss_pred --------CCEEEEECCCccCCccccCCceEEEEECCCCeE----EEEEecCCCCCceeEEEecCC----CEEEEEcc--
Confidence 4666666554 7899999876531 112211 12357899999985 44544433
Q ss_pred eEEEEEeccCCcceeeeeeccCCCcEEEEEEccC-CCEEEEe----cCC-ceEEeeec
Q 022111 236 TVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLT-GNLLAVA----DAN-NVTLWKEA 287 (302)
Q Consensus 236 ~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spd-g~~la~~----~~d-~i~~w~~~ 287 (302)
.|.+||....... ............+.++++|+ ++++++. ..+ .|.+|+..
T Consensus 245 ~v~~~d~~t~~~~-~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 245 DIWRMPVEADRVP-VRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp SEEEEETTCSSCC-SSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred EEEEEECCCCcee-eeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 8888988653211 00111111356889999995 5555554 334 79999975
No 200
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.23 E-value=3.4e-08 Score=83.86 Aligned_cols=234 Identities=10% Similarity=-0.014 Sum_probs=139.2
Q ss_pred cccceeEEEEccCC-CEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCC
Q 022111 10 HEDTVHDVAMDFYG-KRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGN 88 (302)
Q Consensus 10 h~~~v~~~~~s~~~-~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~ 88 (302)
+..--.+..|++++ ..+++...++.|+.|+...... ..+ .+...+.++++.++ |+++++ . +..|.+||..+
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~---~~~-~~~~~~~~i~~~~d--G~l~v~-~-~~~l~~~d~~~ 82 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV---QRV-TMDAPVSSVALRQS--GGYVAT-I-GTKFCALNWKE 82 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE---EEE-ECSSCEEEEEEBTT--SSEEEE-E-TTEEEEEETTT
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE---EEE-eCCCceEEEEECCC--CCEEEE-E-CCeEEEEECCC
Confidence 33344567888864 4566666788999999865332 222 23457889999754 676554 3 56899999865
Q ss_pred CCceeEEEEecC--CCCCeeEEEecCCCCCcEEEEEec---------CCcEEEEEecCCCCeeeeeecccCCCCeEEEEe
Q 022111 89 QNDWTQAHTFND--HKSSVNSIAWAPHELGLSLACGSS---------DGNISVFTATADGGWDTTRIDQAHPVGVTSVSW 157 (302)
Q Consensus 89 ~~~~~~~~~~~~--h~~~i~~l~~~pd~~~~~l~sg~~---------d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 157 (302)
+. ...+..... ....++.+++.|+ |.++++... .....+|.+...+.... +. .+......++|
T Consensus 83 g~-~~~~~~~~~~~~~~~~~di~~d~d--G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~--~~-~~~~~pngi~~ 156 (297)
T 3g4e_A 83 QS-AVVLATVDNDKKNNRFNDGKVDPA--GRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK--YF-DQVDISNGLDW 156 (297)
T ss_dssp TE-EEEEEECCTTCSSEEEEEEEECTT--SCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE--EE-EEESBEEEEEE
T ss_pred Cc-EEEEEecCCCCCCCCCCCEEECCC--CCEEEecCCcccccccccCCCcEEEEEECCCCEEE--Ee-eccccccceEE
Confidence 42 222222211 1235788999987 555554322 23456776654433221 11 12233567889
Q ss_pred CCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEe--cCccc-cccccccccCCCceeEEEeeCCCCCCccEEEEEecC
Q 022111 158 APAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMY--NGIWK-MDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQD 234 (302)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~--~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D 234 (302)
+|++ ..++++.+.++.|.+||+. ++... ...+..+..+......+++.+++ +..++...+
T Consensus 157 spdg-------------~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G----~lwva~~~~ 219 (297)
T 3g4e_A 157 SLDH-------------KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG----KLWVACYNG 219 (297)
T ss_dssp CTTS-------------CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS----CEEEEEETT
T ss_pred cCCC-------------CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC----CEEEEEcCC
Confidence 8864 2355667778899999984 33210 11122333344567889999885 667777778
Q ss_pred CeEEEEEeccCCcceeeeeeccCCCcEEEEEEc-cCCCEEEEec
Q 022111 235 GTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWS-LTGNLLAVAD 277 (302)
Q Consensus 235 ~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s-pdg~~la~~~ 277 (302)
+.|..||..+.. ....+ ......+.+++|. ||++.|.+++
T Consensus 220 ~~v~~~d~~tG~--~~~~i-~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 220 GRVIRLDPVTGK--RLQTV-KLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp TEEEEECTTTCC--EEEEE-ECSSSBEEEEEEESGGGCEEEEEE
T ss_pred CEEEEEcCCCce--EEEEE-ECCCCCceEEEEeCCCCCEEEEEc
Confidence 889999876332 11122 2223568999998 8887665543
No 201
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.17 E-value=1.6e-07 Score=78.99 Aligned_cols=237 Identities=8% Similarity=-0.023 Sum_probs=146.1
Q ss_pred cceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCc
Q 022111 12 DTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQND 91 (302)
Q Consensus 12 ~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~ 91 (302)
..+.+++++++++.+++...++.|..++.. +... ...+......+..+++.+ +++++++...++.|..+|.. +.
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~i~~~~~~-g~- 135 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-EYPLPQPDSGPYGITEGL--NGDIWFTQLNGDRIGKLTAD-GT- 135 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECS--TTCEEEEETTTTEEEEECTT-SC-
T ss_pred CcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-EecCCCCCCCCccceECC--CCCEEEEccCCCeEEEECCC-CC-
Confidence 567889999999877776667889998875 3222 223333445688898864 37787777768889999875 32
Q ss_pred eeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeeccc
Q 022111 92 WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGL 171 (302)
Q Consensus 92 ~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~ 171 (302)
.. ...+......+..+++.|+ +.+.++...++.|..|+. .+........ .+...+..+.+.++
T Consensus 136 ~~-~~~~~~~~~~~~~i~~d~~--g~l~v~~~~~~~i~~~~~--~g~~~~~~~~-~~~~~~~~i~~d~~----------- 198 (300)
T 2qc5_A 136 IY-EYDLPNKGSYPAFITLGSD--NALWFTENQNNSIGRITN--TGKLEEYPLP-TNAAAPVGITSGND----------- 198 (300)
T ss_dssp EE-EEECSSTTCCEEEEEECTT--SSEEEEETTTTEEEEECT--TCCEEEEECS-STTCCEEEEEECTT-----------
T ss_pred EE-EccCCCCCCCceeEEECCC--CCEEEEecCCCeEEEECC--CCcEEEeeCC-CCCCCcceEEECCC-----------
Confidence 11 1223334567889999887 555666555778888875 2222221111 22334566766654
Q ss_pred CCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceee
Q 022111 172 LDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEG 251 (302)
Q Consensus 172 ~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~ 251 (302)
+..+++....+.|.+||. ++... . ..+..+...+.++++.|++ +..++...++.|..||... . ...
T Consensus 199 ---g~l~v~~~~~~~i~~~~~-~g~~~--~-~~~~~~~~~~~~i~~d~~g----~l~v~~~~~~~i~~~~~~g--~-~~~ 264 (300)
T 2qc5_A 199 ---GALWFVEIMGNKIGRITT-TGEIS--E-YDIPTPNARPHAITAGKNS----EIWFTEWGANQIGRITNDN--T-IQE 264 (300)
T ss_dssp ---SSEEEEETTTTEEEEECT-TCCEE--E-EECSSTTCCEEEEEECSTT----CEEEEETTTTEEEEECTTS--C-EEE
T ss_pred ---CCEEEEccCCCEEEEEcC-CCcEE--E-EECCCCCCCceEEEECCCC----CEEEeccCCCeEEEECCCC--c-EEE
Confidence 355555555677998887 33211 1 1122345568899999985 5566666678999998732 1 111
Q ss_pred eeeccCCCcEEEEEEccCCCEEEEecCCceEEeee
Q 022111 252 RVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKE 286 (302)
Q Consensus 252 ~~~~~~~~~v~~~~~spdg~~la~~~~d~i~~w~~ 286 (302)
.........+.++++.++|++.++.. ++|..++.
T Consensus 265 ~~~~~~~~~~~~i~~~~~g~l~v~~~-~~i~~~~p 298 (300)
T 2qc5_A 265 YQLQTENAEPHGITFGKDGSVWFALK-CKIGKLNL 298 (300)
T ss_dssp EECCSTTCCCCCEEECTTSCEEEECS-SEEEEEEE
T ss_pred EECCccCCccceeEeCCCCCEEEEcc-CceEEeCC
Confidence 11222234578899999998776665 35655553
No 202
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.16 E-value=5.4e-09 Score=86.97 Aligned_cols=197 Identities=10% Similarity=0.003 Sum_probs=129.0
Q ss_pred cceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEec-CcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCC
Q 022111 12 DTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLK-GHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQN 90 (302)
Q Consensus 12 ~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~-~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~ 90 (302)
..+.+++++++++.+++.. ++.|.+|+...... ..+. .....+..+++.+ +|+++++...++.|.+|+.....
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~---~~~~~~~~~~p~~i~~~~--~g~l~v~~~~~~~i~~~~~~~~~ 140 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ---TVLPFDGLNYPEGLAVDT--QGAVYVADRGNNRVVKLAAGSKT 140 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC---EECCCCSCSSEEEEEECT--TCCEEEEEGGGTEEEEECTTCCS
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE---eeeecCCcCCCcceEECC--CCCEEEEECCCCEEEEEECCCce
Confidence 4577899999998666655 88899998754322 2222 2235678899875 37888887788899999754332
Q ss_pred ceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecc
Q 022111 91 DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLG 170 (302)
Q Consensus 91 ~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 170 (302)
. ..........+..+++.|+ +.++++...++.|.+|+..... . ......+......++++++
T Consensus 141 ~---~~~~~~~~~~p~~i~~~~~--g~l~v~~~~~~~i~~~~~~~~~-~--~~~~~~~~~~p~~i~~d~~---------- 202 (270)
T 1rwi_B 141 Q---TVLPFTGLNDPDGVAVDNS--GNVYVTDTDNNRVVKLEAESNN-Q--VVLPFTDITAPWGIAVDEA---------- 202 (270)
T ss_dssp C---EECCCCSCCSCCCEEECTT--CCEEEEEGGGTEEEEECTTTCC-E--EECCCSSCCSEEEEEECTT----------
T ss_pred e---EeeccccCCCceeEEEeCC--CCEEEEECCCCEEEEEecCCCc-e--EeecccCCCCceEEEECCC----------
Confidence 1 1111223346788999987 5567776677899999865321 1 1111122244667777664
Q ss_pred cCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEecc
Q 022111 171 LLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAK 244 (302)
Q Consensus 171 ~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~ 244 (302)
+..+++...++.|.+||....... .....+-..+.+++++|++ +.+++...++.|+++++..
T Consensus 203 ----g~l~v~~~~~~~v~~~~~~~~~~~----~~~~~~~~~p~~i~~~~~g----~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 203 ----GTVYVTEHNTNQVVKLLAGSTTST----VLPFTGLNTPLAVAVDSDR----TVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp ----CCEEEEETTTSCEEEECTTCSCCE----ECCCCSCSCEEEEEECTTC----CEEEEEGGGTEEEEECCCG
T ss_pred ----CCEEEEECCCCcEEEEcCCCCcce----eeccCCCCCceeEEECCCC----CEEEEECCCCEEEEEcCCC
Confidence 356677777889999997653211 1112233568999999985 6788888999999998764
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.15 E-value=1.3e-08 Score=97.58 Aligned_cols=239 Identities=14% Similarity=0.053 Sum_probs=133.7
Q ss_pred ccCCCEEEEeeCCCc---EEEEeecC-----CCceEEEE---e-cCcccCeEEEEeeCCCCCCEEEEEeCC-----CeEE
Q 022111 20 DFYGKRLATASSDSS---IKIIGLSN-----SASQHLAT---L-KGHRGPVWQVAWAHPKFGSILASCSYD-----GQVI 82 (302)
Q Consensus 20 s~~~~~l~s~~~d~~---v~lw~~~~-----~~~~~~~~---~-~~h~~~v~~v~~~~~~~~~~l~s~s~D-----~~i~ 82 (302)
+|+|++++-...++. -.||.... +..+.+.. + .+|...+..++|+|+ |++||.++.+ .+|+
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPD--G~~la~~~~~~G~e~~~i~ 192 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDD--GRLLAYSVQDGGSDWRTVK 192 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTT--SSEEEEEEEETTCSEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCC--CCEEEEEEcCCCCceEEEE
Confidence 488988876654433 56676542 22222211 1 234446788999864 8888877653 4699
Q ss_pred EEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCc--------------EEEEEecCCCCeeeeeec-cc
Q 022111 83 IWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN--------------ISVFTATADGGWDTTRID-QA 147 (302)
Q Consensus 83 iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~--------------v~~~~~~~~~~~~~~~~~-~~ 147 (302)
+||+.++... .. .+ +...+..++|+|| . .|+.++.++. |++|++.+.......... ..
T Consensus 193 v~dl~tg~~~-~~-~~--~~~~~~~~~wspD-~--~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~ 265 (741)
T 1yr2_A 193 FVGVADGKPL-AD-EL--KWVKFSGLAWLGN-D--ALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPE 265 (741)
T ss_dssp EEETTTCCEE-EE-EE--EEEESCCCEESTT-S--EEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTT
T ss_pred EEECCCCCCC-Cc-cC--CCceeccEEEECC-C--EEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCC
Confidence 9999876421 11 11 2222367899998 4 5666665543 777876543211111111 12
Q ss_pred CCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCC-----CcEEEEEEecCccccccccccccCCCceeEEEeeCCCC
Q 022111 148 HPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD-----NTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLG 222 (302)
Q Consensus 148 h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D-----~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 222 (302)
+...+..+.|+|++ ++|+..+.+ ..|++||+.++... +...+..+...+.... +|++
T Consensus 266 ~~~~~~~~~~SpDG--------------~~l~~~~~~~~~~~~~l~~~d~~~~~~~--~~~~l~~~~~~~~~~~-~~dg- 327 (741)
T 1yr2_A 266 LPKRGHGASVSSDG--------------RWVVITSSEGTDPVNTVHVARVTNGKIG--PVTALIPDLKAQWDFV-DGVG- 327 (741)
T ss_dssp CTTCEEEEEECTTS--------------CEEEEEEECTTCSCCEEEEEEEETTEEC--CCEEEECSSSSCEEEE-EEET-
T ss_pred CCeEEEEEEECCCC--------------CEEEEEEEccCCCcceEEEEECCCCCCc--ccEEecCCCCceEEEE-eccC-
Confidence 33347788898864 566665543 47999999865211 0223334444444443 4775
Q ss_pred CCccEEEEEec----CCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCc
Q 022111 223 LPKSTIASASQ----DGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDG 290 (302)
Q Consensus 223 ~~~~~l~s~s~----D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~ 290 (302)
+.|+..+. ++.|.+||+......+. .+..+....+.+++|+ ++.+++++..+ ..+||....+|
T Consensus 328 ---~~l~~~s~~~~~~~~l~~~d~~~~~~~~~-~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g 395 (741)
T 1yr2_A 328 ---DQLWFVSGDGAPLKKIVRVDLSGSTPRFD-TVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDG 395 (741)
T ss_dssp ---TEEEEEECTTCTTCEEEEEECSSSSCEEE-EEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTS
T ss_pred ---CEEEEEECCCCCCCEEEEEeCCCCccccE-EEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCC
Confidence 55666654 34588888764211232 3334444557778887 56666777666 56777654333
No 204
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.13 E-value=5.8e-09 Score=87.93 Aligned_cols=185 Identities=12% Similarity=0.037 Sum_probs=118.8
Q ss_pred CCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCC-CCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeeccc
Q 022111 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHK-SSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQA 147 (302)
Q Consensus 69 ~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~-~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~ 147 (302)
+++|++++.|+.|.+||.++++ .+.++..+. ..+.++.+.|+ |.+++ +.++.|..||. +. . .+..+...
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~---~~w~~~~~~~~~~~~~~~~pd--G~ilv--s~~~~V~~~d~-~G-~-~~W~~~~~ 74 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKE---IVWEYPLEKGWECNSVAATKA--GEILF--SYSKGAKMITR-DG-R-ELWNIAAP 74 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTE---EEEEEECCTTCCCCEEEECTT--SCEEE--ECBSEEEEECT-TS-C-EEEEEECC
T ss_pred CcEEEeeCCCCEEEEEECCCCe---EEEEeCCCccCCCcCeEECCC--CCEEE--eCCCCEEEECC-CC-C-EEEEEcCC
Confidence 6899999999999999986653 456666555 46889999998 66777 45778888876 32 2 22333322
Q ss_pred CCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeC-CCcEEEEEEecCc--cccccccccccCCCceeEEEeeCCCCCC
Q 022111 148 HPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGC-DNTVKVWKMYNGI--WKMDCFPALQMHSDWVRSVAWAPNLGLP 224 (302)
Q Consensus 148 h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~-D~~v~iwd~~~~~--~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 224 (302)
....+.++.+.|+ ++.+++.+. ++.|..+|. ++. |.+.......++..+...++..+++
T Consensus 75 ~~~~~~~~~~~~d--------------G~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G--- 136 (276)
T 3no2_A 75 AGCEMQTARILPD--------------GNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKG--- 136 (276)
T ss_dssp TTCEEEEEEECTT--------------SCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTS---
T ss_pred CCccccccEECCC--------------CCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCC---
Confidence 2234566666654 467777665 556666664 332 1111111111222345556677774
Q ss_pred ccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeec
Q 022111 225 KSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEA 287 (302)
Q Consensus 225 ~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~ 287 (302)
+++++...++.|..||.. .+..|.... ...+.++...++|++|+++..+ .|..++..
T Consensus 137 -~~lv~~~~~~~v~~~d~~-G~~~w~~~~----~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 137 -NYLVPLFATSEVREIAPN-GQLLNSVKL----SGTPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp -CEEEEETTTTEEEEECTT-SCEEEEEEC----SSCCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred -CEEEEecCCCEEEEECCC-CCEEEEEEC----CCCccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 789999999999999986 433443221 2356678888999998887766 68778755
No 205
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.11 E-value=2.8e-07 Score=79.35 Aligned_cols=228 Identities=10% Similarity=-0.028 Sum_probs=131.8
Q ss_pred eeEEEEccCC-CEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCce
Q 022111 14 VHDVAMDFYG-KRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDW 92 (302)
Q Consensus 14 v~~~~~s~~~-~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~ 92 (302)
..+..|++++ ..+++...++.|.+|+...+.. ..+. +...+.++.|.++ |+++++. .+ .|.+||..++. .
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~---~~~~-~~~~v~~i~~~~d--g~l~v~~-~~-gl~~~d~~~g~-~ 121 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRK---TVHA-LPFMGSALAKISD--SKQLIAS-DD-GLFLRDTATGV-L 121 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE---EEEE-CSSCEEEEEEEET--TEEEEEE-TT-EEEEEETTTCC-E
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE---EEEE-CCCcceEEEEeCC--CeEEEEE-CC-CEEEEECCCCc-E
Confidence 4567899975 4556666778899998765322 2222 2456889999764 6776654 44 48889986543 2
Q ss_pred eEEEEecC--CCCCeeEEEecCCCCCcEEEEEecC----CcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCce
Q 022111 93 TQAHTFND--HKSSVNSIAWAPHELGLSLACGSSD----GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGAL 166 (302)
Q Consensus 93 ~~~~~~~~--h~~~i~~l~~~pd~~~~~l~sg~~d----~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 166 (302)
..+..... ....++++++.|+ |.++++...+ ....||.+. .+... .+. .+......++|+|++
T Consensus 122 ~~~~~~~~~~~~~~~~~i~~d~~--G~l~v~~~~~~~~~~~~~l~~~~-~g~~~--~~~-~~~~~~~~i~~s~dg----- 190 (326)
T 2ghs_A 122 TLHAELESDLPGNRSNDGRMHPS--GALWIGTMGRKAETGAGSIYHVA-KGKVT--KLF-ADISIPNSICFSPDG----- 190 (326)
T ss_dssp EEEECSSTTCTTEEEEEEEECTT--SCEEEEEEETTCCTTCEEEEEEE-TTEEE--EEE-EEESSEEEEEECTTS-----
T ss_pred EEEeeCCCCCCCCCCCCEEECCC--CCEEEEeCCCcCCCCceEEEEEe-CCcEE--Eee-CCCcccCCeEEcCCC-----
Confidence 22221111 1235889999987 5555443321 234555544 33222 111 122235678888864
Q ss_pred eecccCCCceeEEEeeCCCcEEEEEEe--cC-ccc-cccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEe
Q 022111 167 VGLGLLDPVQKLASCGCDNTVKVWKMY--NG-IWK-MDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242 (302)
Q Consensus 167 ~~~~~~~~~~~l~s~~~D~~v~iwd~~--~~-~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~ 242 (302)
..++++.+.++.|.+||+. ++ ... ...+..+.........+++.+++ +..++...++.|.+||.
T Consensus 191 --------~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G----~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 191 --------TTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG----HIWNARWGEGAVDRYDT 258 (326)
T ss_dssp --------CEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS----CEEEEEETTTEEEEECT
T ss_pred --------CEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCC----CEEEEEeCCCEEEEECC
Confidence 1344555667889999985 33 211 11122233344557789998885 56666666788999987
Q ss_pred ccCCcceeeeeeccCCCcEEEEEEc-cCCCEEEEec
Q 022111 243 AKEGEQWEGRVLKDFKTPVWSVSWS-LTGNLLAVAD 277 (302)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~v~~~~~s-pdg~~la~~~ 277 (302)
... . . .........+.+++|+ |+++.|.++.
T Consensus 259 ~g~--~-~-~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 259 DGN--H-I-ARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp TCC--E-E-EEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred CCC--E-E-EEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 321 1 1 1122233468999998 8987765543
No 206
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.10 E-value=6.7e-08 Score=89.53 Aligned_cols=236 Identities=11% Similarity=-0.021 Sum_probs=141.5
Q ss_pred ccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcC--CCCceeEEEE
Q 022111 20 DFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEG--NQNDWTQAHT 97 (302)
Q Consensus 20 s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~--~~~~~~~~~~ 97 (302)
++.+.++++...+++|.++|..+. +.+..+... ..+..+.|+++ |+++++++.|+.|.+||+. +. ..+.+
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~--~v~~~i~~g-~~p~~v~~SpD--Gr~lyv~~~dg~V~viD~~~~t~---~~v~~ 235 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTY--EIKTVLDTG-YAVHISRLSAS--GRYLFVIGRDGKVNMIDLWMKEP---TTVAE 235 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTC--CEEEEEECS-SCEEEEEECTT--SCEEEEEETTSEEEEEETTSSSC---CEEEE
T ss_pred CCCceEEEEeCCCCeEEEEECCCC--eEEEEEeCC-CCccceEECCC--CCEEEEEcCCCeEEEEECCCCCC---cEeEE
Confidence 344567778888999999998653 445555432 24568899864 8899999999999999985 43 23445
Q ss_pred ecCCCCCeeEEEec----CCCCCcEEEE-EecCCcEEEEEecCCCCeeeeeecc-------cCCC-CeEEEEeCCCCCCC
Q 022111 98 FNDHKSSVNSIAWA----PHELGLSLAC-GSSDGNISVFTATADGGWDTTRIDQ-------AHPV-GVTSVSWAPAMAPG 164 (302)
Q Consensus 98 ~~~h~~~i~~l~~~----pd~~~~~l~s-g~~d~~v~~~~~~~~~~~~~~~~~~-------~h~~-~v~~~~~~~~~~~~ 164 (302)
+.... ....++|+ || |+++++ .-.++++.++|..+........... .|+. .+..+..++..
T Consensus 236 i~~G~-~P~~ia~s~~~~pD--Gk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~--- 309 (567)
T 1qks_A 236 IKIGS-EARSIETSKMEGWE--DKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYR--- 309 (567)
T ss_dssp EECCS-EEEEEEECCSTTCT--TTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSS---
T ss_pred EecCC-CCceeEEccccCCC--CCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCC---
Confidence 54333 35789999 57 555554 4556999999965433222111110 0212 45556655542
Q ss_pred ceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEE-EEEecCCeEEEEEec
Q 022111 165 ALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTI-ASASQDGTVVIWTCA 243 (302)
Q Consensus 165 ~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l-~s~s~D~~i~iwd~~ 243 (302)
..++++...++.|.++|..+... +. ... ........++.|+|++ ++| ++...++.|.++|..
T Consensus 310 ----------~~~vv~~~~~g~v~~vd~~~~~~-~~-v~~-i~~~~~~~d~~~~pdg----r~~~va~~~sn~V~ViD~~ 372 (567)
T 1qks_A 310 ----------PEFIVNVKETGKILLVDYTDLNN-LK-TTE-ISAERFLHDGGLDGSH----RYFITAANARNKLVVIDTK 372 (567)
T ss_dssp ----------SEEEEEETTTTEEEEEETTCSSE-EE-EEE-EECCSSEEEEEECTTS----CEEEEEEGGGTEEEEEETT
T ss_pred ----------CEEEEEecCCCeEEEEecCCCcc-ce-eee-eeccccccCceECCCC----CEEEEEeCCCCeEEEEECC
Confidence 35677777789999998754321 01 111 1233456789999996 444 555568899999987
Q ss_pred cCCcceeeeeec--cCCCcEEEEE-EccCC-CEEEEe--cCCceEEeeecC
Q 022111 244 KEGEQWEGRVLK--DFKTPVWSVS-WSLTG-NLLAVA--DANNVTLWKEAV 288 (302)
Q Consensus 244 ~~~~~~~~~~~~--~~~~~v~~~~-~spdg-~~la~~--~~d~i~~w~~~~ 288 (302)
+.... ..+.. ....+-.... ++|++ ...++. +++.|.+++...
T Consensus 373 t~kl~--~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 373 EGKLV--AIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp TTEEE--EEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCcEE--EEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 64311 11111 1111111222 57875 444554 234799999754
No 207
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.06 E-value=9.7e-08 Score=81.31 Aligned_cols=233 Identities=7% Similarity=-0.026 Sum_probs=133.0
Q ss_pred ccceeEEEEccCCC-EEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCC
Q 022111 11 EDTVHDVAMDFYGK-RLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQ 89 (302)
Q Consensus 11 ~~~v~~~~~s~~~~-~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~ 89 (302)
.....+..|+++++ .+++...++.|..|+... . ...+..+...+..+++.++ |+++++...++.|.+|+.. +
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g-~---~~~~~~~~~~~~gl~~d~d--G~l~v~~~~~~~v~~~~~~-g 116 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG-T---VDVLLDATAFTNGNAVDAQ--QRLVHCEHGRRAITRSDAD-G 116 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS-C---EEEEEESCSCEEEEEECTT--SCEEEEETTTTEEEEECTT-S
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC-C---EEEEeCCCCccceeeECCC--CCEEEEECCCCEEEEECCC-C
Confidence 33456788999998 566666788999998632 2 2334445567888998753 7776655566889999874 3
Q ss_pred CceeEEE-EecCC-CCCeeEEEecCCCCCcEEEE----Eec-------------CCcEEEEEecCCCCeeeeeecccCCC
Q 022111 90 NDWTQAH-TFNDH-KSSVNSIAWAPHELGLSLAC----GSS-------------DGNISVFTATADGGWDTTRIDQAHPV 150 (302)
Q Consensus 90 ~~~~~~~-~~~~h-~~~i~~l~~~pd~~~~~l~s----g~~-------------d~~v~~~~~~~~~~~~~~~~~~~h~~ 150 (302)
. ...+. ...+. ...++.+++.|+ |.++++ |.. .+.|..|+... +...... ...
T Consensus 117 ~-~~~~~~~~~~~~~~~~~~i~~d~d--G~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~-g~~~~~~----~~~ 188 (305)
T 3dr2_A 117 Q-AHLLVGRYAGKRLNSPNDLIVARD--GAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDG-SPLQRMA----DLD 188 (305)
T ss_dssp C-EEEEECEETTEECSCCCCEEECTT--SCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS-CCCEEEE----EES
T ss_pred C-EEEEEeccCCCccCCCCCEEECCC--CCEEEeCcCCCccccccccccccccCCCeEEEEcCCC-CcEEEEe----cCC
Confidence 2 22111 11111 234678999887 666665 332 13344444322 2222111 122
Q ss_pred CeEEEEeCCCCCCCceeecccCCCceeEEEeeCC------CcEEEEEEecCcccccccccc-ccCCCceeEEEeeCCCCC
Q 022111 151 GVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD------NTVKVWKMYNGIWKMDCFPAL-QMHSDWVRSVAWAPNLGL 223 (302)
Q Consensus 151 ~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D------~~v~iwd~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~ 223 (302)
....++|+|++ +.|+.+... +.|.+||+.... +.....+ .........+++.+++
T Consensus 189 ~p~gl~~spdg--------------~~lyv~~~~~~~~~~~~i~~~~~~~~~--l~~~~~~~~~~~~~pdgi~~d~~G-- 250 (305)
T 3dr2_A 189 HPNGLAFSPDE--------------QTLYVSQTPEQGHGSVEITAFAWRDGA--LHDRRHFASVPDGLPDGFCVDRGG-- 250 (305)
T ss_dssp SEEEEEECTTS--------------SEEEEEECCC---CCCEEEEEEEETTE--EEEEEEEECCSSSCCCSEEECTTS--
T ss_pred CCcceEEcCCC--------------CEEEEEecCCcCCCCCEEEEEEecCCC--ccCCeEEEECCCCCCCeEEECCCC--
Confidence 35678888864 444444433 689999987542 1100111 1122334567888885
Q ss_pred CccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCCceEEee
Q 022111 224 PKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWK 285 (302)
Q Consensus 224 ~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d~i~~w~ 285 (302)
+ |-.++.+ .|.+|+.... ....+ . ....+.+++|+|+++.|.++..+++...+
T Consensus 251 --~-lwv~~~~-gv~~~~~~g~---~~~~~-~-~~~~~~~~~f~~d~~~L~it~~~~l~~~~ 303 (305)
T 3dr2_A 251 --W-LWSSSGT-GVCVFDSDGQ---LLGHI-P-TPGTASNCTFDQAQQRLFITGGPCLWMLP 303 (305)
T ss_dssp --C-EEECCSS-EEEEECTTSC---EEEEE-E-CSSCCCEEEECTTSCEEEEEETTEEEEEE
T ss_pred --C-EEEecCC-cEEEECCCCC---EEEEE-E-CCCceeEEEEeCCCCEEEEEcCCeEEEEE
Confidence 4 3344444 4888987422 11122 1 12357889999999888777777655443
No 208
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.06 E-value=6.8e-08 Score=83.30 Aligned_cols=217 Identities=7% Similarity=-0.088 Sum_probs=131.2
Q ss_pred CCCcEEEEeecCCCceEEEEec------CcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCC
Q 022111 31 SDSSIKIIGLSNSASQHLATLK------GHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSS 104 (302)
Q Consensus 31 ~d~~v~lw~~~~~~~~~~~~~~------~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~ 104 (302)
.+++|.++|.... +....+. ........+.+.. ++++++...+++|.+||..+.. .+.++. ....
T Consensus 15 ~~~~l~~~d~~t~--~~~~~i~~~~n~~~lg~~~~~i~~~~---~~lyv~~~~~~~v~viD~~t~~---~~~~i~-~~~~ 85 (328)
T 3dsm_A 15 SNATLSYYDPATC--EVENEVFYRANGFKLGDVAQSMVIRD---GIGWIVVNNSHVIFAIDINTFK---EVGRIT-GFTS 85 (328)
T ss_dssp CCBEEEEEETTTT--EEECSHHHHHHSSCCBSCEEEEEEET---TEEEEEEGGGTEEEEEETTTCC---EEEEEE-CCSS
T ss_pred CCceEEEEECCCC--EEhhhhHhhhcCcccCccceEEEEEC---CEEEEEEcCCCEEEEEECcccE---EEEEcC-CCCC
Confidence 4789999998653 2222220 1123456777742 5677777778999999997763 444554 3466
Q ss_pred eeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccC----CCCeEEEEeCCCCCCCceeecccCCCceeEEE
Q 022111 105 VNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAH----PVGVTSVSWAPAMAPGALVGLGLLDPVQKLAS 180 (302)
Q Consensus 105 i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s 180 (302)
...++++|+ +...++...++.|.+||..+.... ..+..+. ......+++ +.+..+++
T Consensus 86 p~~i~~~~~--g~lyv~~~~~~~v~~iD~~t~~~~--~~i~~g~~~~~~~~p~~i~~---------------~~~~lyv~ 146 (328)
T 3dsm_A 86 PRYIHFLSD--EKAYVTQIWDYRIFIINPKTYEIT--GYIECPDMDMESGSTEQMVQ---------------YGKYVYVN 146 (328)
T ss_dssp EEEEEEEET--TEEEEEEBSCSEEEEEETTTTEEE--EEEECTTCCTTTCBCCCEEE---------------ETTEEEEE
T ss_pred CcEEEEeCC--CeEEEEECCCCeEEEEECCCCeEE--EEEEcCCccccCCCcceEEE---------------ECCEEEEE
Confidence 889999887 544455448899999997643211 1121111 001222333 12355555
Q ss_pred ee-CCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecC----------CeEEEEEeccCCcce
Q 022111 181 CG-CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQD----------GTVVIWTCAKEGEQW 249 (302)
Q Consensus 181 ~~-~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D----------~~i~iwd~~~~~~~~ 249 (302)
.. .++.|.++|+.++.. ...+.. ......+.++|++ +.+++...+ +.|.++|..+.. .
T Consensus 147 ~~~~~~~v~viD~~t~~~----~~~i~~-g~~p~~i~~~~dG----~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~--v 215 (328)
T 3dsm_A 147 CWSYQNRILKIDTETDKV----VDELTI-GIQPTSLVMDKYN----KMWTITDGGYEGSPYGYEAPSLYRIDAETFT--V 215 (328)
T ss_dssp ECTTCCEEEEEETTTTEE----EEEEEC-SSCBCCCEECTTS----EEEEEBCCBCTTCSSCBCCCEEEEEETTTTE--E
T ss_pred cCCCCCEEEEEECCCCeE----EEEEEc-CCCccceEEcCCC----CEEEEECCCccCCccccCCceEEEEECCCCe--E
Confidence 54 588999999887632 122221 2234678889985 566666554 789999986532 1
Q ss_pred eeeeeccCCCcEEEEEEccCCCEEEEecCCceEEeeec
Q 022111 250 EGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKEA 287 (302)
Q Consensus 250 ~~~~~~~~~~~v~~~~~spdg~~la~~~~d~i~~w~~~ 287 (302)
...+..........++|+||+++|.++.. .|.+||..
T Consensus 216 ~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~~ 252 (328)
T 3dsm_A 216 EKQFKFKLGDWPSEVQLNGTRDTLYWINN-DIWRMPVE 252 (328)
T ss_dssp EEEEECCTTCCCEEEEECTTSCEEEEESS-SEEEEETT
T ss_pred EEEEecCCCCCceeEEEecCCCEEEEEcc-EEEEEECC
Confidence 11221111236889999999999888866 78888864
No 209
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.02 E-value=2.6e-07 Score=80.12 Aligned_cols=239 Identities=9% Similarity=0.063 Sum_probs=139.5
Q ss_pred cceeEEEEccCCCEEEEee--CCCcEEEEeecCCCceEEEEe-------cCcccCeEEEEeeCCCCCCEEEEEeC-----
Q 022111 12 DTVHDVAMDFYGKRLATAS--SDSSIKIIGLSNSASQHLATL-------KGHRGPVWQVAWAHPKFGSILASCSY----- 77 (302)
Q Consensus 12 ~~v~~~~~s~~~~~l~s~~--~d~~v~lw~~~~~~~~~~~~~-------~~h~~~v~~v~~~~~~~~~~l~s~s~----- 77 (302)
..+..++++++|+.+++.. .++.++||.+.. ++ +..+ .+|...+..|++.++ ++++++-..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~--g~-~~~~p~~~~~~~~~~~~p~gv~~d~~--g~L~v~D~g~~~~~ 91 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQ--DG-LIPFPPQSGNAIITFDTVLGIKSDGN--GIVWMLDNGNQSKS 91 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEET--TE-EEESCCCCSSCCCCCSCEEEEEECSS--SEEEEEECHHHHTS
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECC--CC-eecCCCcccCcccceeEeeEEEEcCC--CcEEEEcCCCCcCC
Confidence 5688899999999988853 234367777652 22 2222 235567899999753 666655433
Q ss_pred CCeEEEEEcCCCCceeEEEEecC------CCCCeeEEEecCCCCCcEEEEEe---cCCcEEEEEecCCCCeeeeeecccC
Q 022111 78 DGQVIIWKEGNQNDWTQAHTFND------HKSSVNSIAWAPHELGLSLACGS---SDGNISVFTATADGGWDTTRIDQAH 148 (302)
Q Consensus 78 D~~i~iwd~~~~~~~~~~~~~~~------h~~~i~~l~~~pd~~~~~l~sg~---~d~~v~~~~~~~~~~~~~~~~~~~h 148 (302)
+..|.+||+.++. ....+.. +...+..+++.|+. +..+++-. .++.|.+||..+...+.. + ..|
T Consensus 92 ~~~i~~~d~~tg~---~~~~~~~~~~~~~~~~~~~~v~vd~~~-g~~yvtd~~~~~~~~i~v~d~~~g~~~r~--~-~~~ 164 (343)
T 2qe8_A 92 VPKLVAWDTLNNQ---LSRVIYLPPPITLSNSFVNDLAVDLIH-NFVYISDPAPDDKAALIRVDLQTGLAARV--L-QGY 164 (343)
T ss_dssp CCEEEEEETTTTE---EEEEEECCTTTSCTTCCCCEEEEETTT-TEEEEEECCSGGGCEEEEEETTTCCEEEE--C-TTC
T ss_pred CCeEEEEECCCCe---EEEEEECChhhcccccccceEEEecCC-CEEEEEcCccCCCCeEEEEECCCCCEEEE--e-cCC
Confidence 5789999987653 2333321 22456899998763 44555555 678999999764322211 1 111
Q ss_pred C-----------------------------CCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcc--
Q 022111 149 P-----------------------------VGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIW-- 197 (302)
Q Consensus 149 ~-----------------------------~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~-- 197 (302)
. ..+..++|+| +++.|+.+..++. ++|.+.....
T Consensus 165 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~--------------dg~~ly~~~~~~~-~l~~~~~~~~~~ 229 (343)
T 2qe8_A 165 PGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA--------------ENEWLYLSPMHST-SMYRIKSADLSN 229 (343)
T ss_dssp TTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECT--------------TSCEEEEEESSCS-EEEEEEHHHHTC
T ss_pred CcccccccceeECCEEEEeccCCCceeceecccceeEecc--------------CCCEEEEEeCCCC-eEEEEEHHHhcC
Confidence 1 1123344444 4566666655553 5555432100
Q ss_pred ----ccccccc--cccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeec-cCCCcEEEEEEccCC
Q 022111 198 ----KMDCFPA--LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLK-DFKTPVWSVSWSLTG 270 (302)
Q Consensus 198 ----~~~~~~~--~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~spdg 270 (302)
....... ..++......+++++++ ..+++...++.|.+||.... ... .+.. .....+.+++|.++|
T Consensus 230 ~~~~~~~~~~~~~~~g~~g~pdgia~d~~G----~l~va~~~~~~V~~~d~~~G--~~~-~~~~~~~~~~p~~va~~~~g 302 (343)
T 2qe8_A 230 LQLTDAELGSKIERYSEKPICDGISIDKDH----NIYVGDLAHSAIGVITSADR--AYK-LLVTDEKLSWTDSFNFGSDG 302 (343)
T ss_dssp TTCCHHHHHTTCEEEEECCSCSCEEECTTC----CEEEEEGGGTEEEEEETTTT--EEE-EEEECGGGSCEEEEEECTTS
T ss_pred CCCChhhhhcceEecccCCCCceEEECCCC----CEEEEccCCCeEEEEECCCC--CEE-EEEECCceecCCeeEECCCC
Confidence 0000011 11344456678999885 77888889999999997321 111 1211 113458899999999
Q ss_pred CEEEEecCC-ceEEe
Q 022111 271 NLLAVADAN-NVTLW 284 (302)
Q Consensus 271 ~~la~~~~d-~i~~w 284 (302)
+++++..+. .+.+|
T Consensus 303 ~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 303 YLYFDCNQLHHSAPL 317 (343)
T ss_dssp CEEEEECCGGGSGGG
T ss_pred cEEEEeCcccccccc
Confidence 888887654 44434
No 210
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.00 E-value=1.1e-07 Score=80.61 Aligned_cols=201 Identities=7% Similarity=0.080 Sum_probs=121.0
Q ss_pred cccceeEEEEccC-CCEEEEeeCCCcEEEEeecCCCceEE-EEe-cC-cccCeEEEEeeCCCCCCEEEEEeCC-------
Q 022111 10 HEDTVHDVAMDFY-GKRLATASSDSSIKIIGLSNSASQHL-ATL-KG-HRGPVWQVAWAHPKFGSILASCSYD------- 78 (302)
Q Consensus 10 h~~~v~~~~~s~~-~~~l~s~~~d~~v~lw~~~~~~~~~~-~~~-~~-h~~~v~~v~~~~~~~~~~l~s~s~D------- 78 (302)
+...+.+++++++ ++++++ +....|.+|+.. +....+ ... .+ +...+.++++.+ +|+++++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~-~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~--~g~l~v~~~~~~~~~~~~ 144 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVA-DMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDY--EGNLWITAPAGEVAPADY 144 (314)
T ss_dssp EECCEEEEEECSSSSEEEEE-ETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECT--TSCEEEEECBCBCTTSCC
T ss_pred CCCCCceEEEecCCCcEEEE-ECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECC--CCCEEEEecCcccccccc
Confidence 4467888999999 765554 444578888876 332211 111 11 223578899865 37777776655
Q ss_pred --------CeEEEEEcCCCCceeEEEEecCCCCCeeEEEec----CCCCCcE-EEEEecCCcEEEEEecCCCCeee----
Q 022111 79 --------GQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWA----PHELGLS-LACGSSDGNISVFTATADGGWDT---- 141 (302)
Q Consensus 79 --------~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~----pd~~~~~-l~sg~~d~~v~~~~~~~~~~~~~---- 141 (302)
+.|..++.. + ... .+..+......++|+ |+ +.. +++...++.|.+|+....+....
T Consensus 145 ~~~~~~~~~~l~~~~~~-g-~~~---~~~~~~~~~~~i~~~~~~d~d--g~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~ 217 (314)
T 1pjx_A 145 TRSMQEKFGSIYCFTTD-G-QMI---QVDTAFQFPNGIAVRHMNDGR--PYQLIVAETPTKKLWSYDIKGPAKIENKKVW 217 (314)
T ss_dssp CBTTSSSCEEEEEECTT-S-CEE---EEEEEESSEEEEEEEECTTSC--EEEEEEEETTTTEEEEEEEEETTEEEEEEEE
T ss_pred cccccCCCCeEEEECCC-C-CEE---EeccCCCCcceEEEecccCCC--CCEEEEEECCCCeEEEEECCCCCccccceEE
Confidence 455555543 2 211 122233456889999 87 544 44555678999998753222111
Q ss_pred eeecccCC-CCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCC
Q 022111 142 TRIDQAHP-VGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPN 220 (302)
Q Consensus 142 ~~~~~~h~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 220 (302)
..+. .+. .....++++++ +.++++...++.|.+||..++. ....+..+...+.+++|+|+
T Consensus 218 ~~~~-~~~~~~p~~i~~d~~--------------G~l~v~~~~~~~i~~~d~~~g~----~~~~~~~~~~~~~~i~~~~d 278 (314)
T 1pjx_A 218 GHIP-GTHEGGADGMDFDED--------------NNLLVANWGSSHIEVFGPDGGQ----PKMRIRCPFEKPSNLHFKPQ 278 (314)
T ss_dssp EECC-CCSSCEEEEEEEBTT--------------CCEEEEEETTTEEEEECTTCBS----CSEEEECSSSCEEEEEECTT
T ss_pred EECC-CCCCCCCCceEECCC--------------CCEEEEEcCCCEEEEEcCCCCc----EeEEEeCCCCCceeEEECCC
Confidence 1111 122 33556666654 4667777778899999976442 22334445578999999998
Q ss_pred CCCCcc-EEEEEecCCeEEEEEecc
Q 022111 221 LGLPKS-TIASASQDGTVVIWTCAK 244 (302)
Q Consensus 221 ~~~~~~-~l~s~s~D~~i~iwd~~~ 244 (302)
+ + .+++...++.|..|++..
T Consensus 279 g----~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 279 T----KTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp S----SEEEEEETTTTEEEEEECSS
T ss_pred C----CEEEEEeCCCCeEEEEeCCC
Confidence 5 5 556666778999998764
No 211
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.91 E-value=5.6e-06 Score=72.63 Aligned_cols=239 Identities=10% Similarity=0.039 Sum_probs=131.5
Q ss_pred EEEEccCCCEEEEee----------CCCcEEEEeecCCCceEEEEecCc-------ccCeEEEEeeCCCCCCEEEEEeC-
Q 022111 16 DVAMDFYGKRLATAS----------SDSSIKIIGLSNSASQHLATLKGH-------RGPVWQVAWAHPKFGSILASCSY- 77 (302)
Q Consensus 16 ~~~~s~~~~~l~s~~----------~d~~v~lw~~~~~~~~~~~~~~~h-------~~~v~~v~~~~~~~~~~l~s~s~- 77 (302)
.+.++|||++|+.+. .++.|.+||... .+.+..+.-- ...-..+.|+++ |++|+.+..
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t--~~~~~~i~~~~~~~~~~g~~p~~~~~spD--G~~l~v~n~~ 145 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT--FLPIADIELPDAPRFDVGPYSWMNANTPN--NADLLFFQFA 145 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC--CcEEEEEECCCccccccCCCccceEECCC--CCEEEEEecC
Confidence 789999999998875 367899999854 2333332110 112346888764 888877764
Q ss_pred -CCeEEEEEcCCCCceeEEEE-ecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecc--cCCCCe-
Q 022111 78 -DGQVIIWKEGNQNDWTQAHT-FNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQ--AHPVGV- 152 (302)
Q Consensus 78 -D~~i~iwd~~~~~~~~~~~~-~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~--~h~~~v- 152 (302)
+.+|.++| .++. ...+ +... .++.+.|+.. ..+++.+.|+.+.+++. ............ ....++
T Consensus 146 ~~~~v~viD-~t~~---~~~~~i~~~----~~~~~~~~~~-~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~ 215 (373)
T 2mad_H 146 AGPAVGLVV-QGGS---SDDQLLSSP----TCYHIHPGAP-STFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLL 215 (373)
T ss_pred CCCeEEEEE-CCCC---EEeEEcCCC----ceEEEEeCCC-ceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCccee
Confidence 57899999 7653 3344 3311 2344556532 35666778899999887 432221110000 000110
Q ss_pred EEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccc----------cCCCceeEEEeeCCCC
Q 022111 153 TSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQ----------MHSDWVRSVAWAPNLG 222 (302)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~----------~h~~~v~~v~~~p~~~ 222 (302)
....+.++ .+..++.. ..+.+.+.|+.+.... ....+. -......-+.++|++
T Consensus 216 ~~~~~~~~-------------~~~~~~~~-~~~~v~vid~~~~~~~--v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~- 278 (373)
T 2mad_H 216 TQPAQANK-------------SGRIVWPV-YSGKILQADISAAGAT--NKAPIDALSGGRKADTWRPGGWQQVAYLKSS- 278 (373)
T ss_pred ecceeEec-------------CCEEEEEc-CCceEEEEeccCCcce--EeeeeeecCCcccccceecCceEeEEECCCC-
Confidence 11122222 12333333 5678888888643211 011111 012223447788886
Q ss_pred CCccEEEEEe---------cCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCC-EEEEec--CCceEEeeecCCc
Q 022111 223 LPKSTIASAS---------QDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGN-LLAVAD--ANNVTLWKEAVDG 290 (302)
Q Consensus 223 ~~~~~l~s~s---------~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~la~~~--~d~i~~w~~~~~~ 290 (302)
+..+++.. .++.|.+.|..+... ...+ ......++++|+|||+ ++.++. ++.|.++|.....
T Consensus 279 --~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v--v~~i--~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 279 --DGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT--SSQI--SLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred --CEEEEEeccCCcccccCCCCeEEEEECCCCEE--EEEE--ECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 23333332 235788888865421 1122 2234588999999999 677765 3479999986544
Q ss_pred e
Q 022111 291 E 291 (302)
Q Consensus 291 ~ 291 (302)
.
T Consensus 353 v 353 (373)
T 2mad_H 353 Q 353 (373)
T ss_pred E
Confidence 3
No 212
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.88 E-value=7.7e-07 Score=79.17 Aligned_cols=204 Identities=11% Similarity=-0.011 Sum_probs=116.8
Q ss_pred CeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCC--cEEEEEec
Q 022111 57 PVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDG--NISVFTAT 134 (302)
Q Consensus 57 ~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~--~v~~~~~~ 134 (302)
....|+|.+ +++++++...++.|+.||..++. +..+........ ++|+|+ +..|+.++.++ .|.+++..
T Consensus 132 ~P~~la~d~--~g~lyv~d~~~~~I~~id~~~g~----~~~~~~~~~~~~-ia~~~~--g~~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 132 YMWGIAAVG--NNTVLAYQRDDPRVRLISVDDNK----VTTVHPGFKGGK-PAVTKD--KQRVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp CEEEEEECS--TTEEEEEETTTTEEEEEETTTTE----EEEEEETCCBCB-CEECTT--SSEEEEEBSSTTCEEEEEEGG
T ss_pred CceEEEEeC--CCCEEEEecCCCcEEEEECCCCE----EEEeeccCCCCc-eeEecC--CCcEEEEecCCCceEEEEEcC
Confidence 466888875 37788887788999999987542 222211222234 889987 55777777766 67777654
Q ss_pred CCCCeeee-eecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCce-
Q 022111 135 ADGGWDTT-RIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWV- 212 (302)
Q Consensus 135 ~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v- 212 (302)
........ ...........+++++|.. +.+++ +..++.|+.||..++...........++...-
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~-------------g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P 268 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETE-------------EWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNP 268 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTS-------------SEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSCCCCSS
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCC-------------CeEEE-EECCCcEEEEECCCCCEEEEecccccCCCCCCc
Confidence 32211111 1111122334566666632 34444 66678899999875531110000012222222
Q ss_pred -eEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeee-eccC---------CCcEEEEEEccCCCEEEEec-CC-
Q 022111 213 -RSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRV-LKDF---------KTPVWSVSWSLTGNLLAVAD-AN- 279 (302)
Q Consensus 213 -~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~-~~~~---------~~~v~~~~~spdg~~la~~~-~d- 279 (302)
..++|+|++ +..+++-..++.|+.|+............ ..++ -.....++++|+|+++++-. .+
T Consensus 269 ~~~ia~~p~~---g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~ 345 (409)
T 3hrp_A 269 GPYLIYYFVD---SNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGY 345 (409)
T ss_dssp CCEEEEETTT---TEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTC
T ss_pred cccEEEeCCC---CEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCC
Confidence 389999963 36777888889999998653210000000 0000 13478999999999666655 55
Q ss_pred ceEEeee
Q 022111 280 NVTLWKE 286 (302)
Q Consensus 280 ~i~~w~~ 286 (302)
.|+.|+.
T Consensus 346 ~I~~~~~ 352 (409)
T 3hrp_A 346 CLRKLDI 352 (409)
T ss_dssp EEEEEET
T ss_pred EEEEEEC
Confidence 6888884
No 213
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.84 E-value=9.9e-06 Score=68.50 Aligned_cols=198 Identities=12% Similarity=0.081 Sum_probs=115.7
Q ss_pred eEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCC
Q 022111 58 VWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADG 137 (302)
Q Consensus 58 v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~ 137 (302)
-.+..|+++ .+.++++...++.|..||..+.. ...+. ....+.++++.|+ +.++++ . ++.|.+||..+.
T Consensus 15 ~Egp~w~~~-~~~l~~~d~~~~~i~~~d~~~~~----~~~~~-~~~~~~~i~~~~d--G~l~v~-~-~~~l~~~d~~~g- 83 (297)
T 3g4e_A 15 GESPVWEEV-SNSLLFVDIPAKKVCRWDSFTKQ----VQRVT-MDAPVSSVALRQS--GGYVAT-I-GTKFCALNWKEQ- 83 (297)
T ss_dssp EEEEEEETT-TTEEEEEETTTTEEEEEETTTCC----EEEEE-CSSCEEEEEEBTT--SSEEEE-E-TTEEEEEETTTT-
T ss_pred ccCCeEECC-CCEEEEEECCCCEEEEEECCCCc----EEEEe-CCCceEEEEECCC--CCEEEE-E-CCeEEEEECCCC-
Confidence 346778764 36778888889999999987643 12222 4567999999988 554444 3 567888886532
Q ss_pred Ceee-eeeccc-CCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeC---------CCcEEEEEEecCccccccccccc
Q 022111 138 GWDT-TRIDQA-HPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGC---------DNTVKVWKMYNGIWKMDCFPALQ 206 (302)
Q Consensus 138 ~~~~-~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~---------D~~v~iwd~~~~~~~~~~~~~~~ 206 (302)
.... ...... ....+..+.++|++ +++++... .....||.+.... ... .+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~di~~d~dG--------------~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~---~~~ 145 (297)
T 3g4e_A 84 SAVVLATVDNDKKNNRFNDGKVDPAG--------------RYFAGTMAEETAPAVLERHQGALYSLFPDH-HVK---KYF 145 (297)
T ss_dssp EEEEEEECCTTCSSEEEEEEEECTTS--------------CEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEE---EEE
T ss_pred cEEEEEecCCCCCCCCCCCEEECCCC--------------CEEEecCCcccccccccCCCcEEEEEECCC-CEE---EEe
Confidence 2221 111101 11235667777653 44444322 2335666665321 111 112
Q ss_pred cCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEecc-CCcceeeeeec---cCCCcEEEEEEccCCCEEEEecCC-ce
Q 022111 207 MHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAK-EGEQWEGRVLK---DFKTPVWSVSWSLTGNLLAVADAN-NV 281 (302)
Q Consensus 207 ~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~-~~~~~~~~~~~---~~~~~v~~~~~spdg~~la~~~~d-~i 281 (302)
.+-...+.++|+|++ ...+++.+.++.|.+|++.. .......+... ........+++.++|++.++...+ .|
T Consensus 146 ~~~~~pngi~~spdg---~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v 222 (297)
T 3g4e_A 146 DQVDISNGLDWSLDH---KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRV 222 (297)
T ss_dssp EEESBEEEEEECTTS---CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEE
T ss_pred eccccccceEEcCCC---CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEE
Confidence 223346889999996 23456777789999999852 21111111111 222457889999999887776544 69
Q ss_pred EEeeec
Q 022111 282 TLWKEA 287 (302)
Q Consensus 282 ~~w~~~ 287 (302)
.+|+..
T Consensus 223 ~~~d~~ 228 (297)
T 3g4e_A 223 IRLDPV 228 (297)
T ss_dssp EEECTT
T ss_pred EEEcCC
Confidence 999864
No 214
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.80 E-value=3.2e-06 Score=74.08 Aligned_cols=246 Identities=12% Similarity=0.074 Sum_probs=135.3
Q ss_pred EEEEccCCCEEEEee----------CCCcEEEEeecCCCceEEEEecCc-------ccCeEEEEeeCCCCCCEEEEEeC-
Q 022111 16 DVAMDFYGKRLATAS----------SDSSIKIIGLSNSASQHLATLKGH-------RGPVWQVAWAHPKFGSILASCSY- 77 (302)
Q Consensus 16 ~~~~s~~~~~l~s~~----------~d~~v~lw~~~~~~~~~~~~~~~h-------~~~v~~v~~~~~~~~~~l~s~s~- 77 (302)
.+.++|||++|+.+. .++.|.+||..+. +.+..+.-. ...-..+.|+++ |++|..+..
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~--~v~~~I~v~~g~r~~~g~~P~~~a~spD--Gk~lyVan~~ 157 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL--LPTADIELPDAPRFLVGTYPWMTSLTPD--GKTLLFYQFS 157 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC--CEEEEEEETTCCCCCBSCCGGGEEECTT--SSEEEEEECS
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC--eEEEEEECCCccccccCCCCceEEEcCC--CCEEEEEEcC
Confidence 389999999887765 3678999998653 334433210 112345788764 787766653
Q ss_pred -CCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCC----CCe
Q 022111 78 -DGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHP----VGV 152 (302)
Q Consensus 78 -D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~----~~v 152 (302)
++.|.++|..+.. .+.++.... |..+.|.. ...+++.+.||++.+.++...+.... ... .+. ..+
T Consensus 158 ~~~~VsVID~~t~~---vv~tI~v~g----~~~~~P~g-~~~~~~~~~DG~~~~v~~~~~g~v~~-~~~-~~~~~~~~~~ 227 (386)
T 3sjl_D 158 PAPAVGVVDLEGKA---FKRMLDVPD----CYHIFPTA-PDTFFMHCRDGSLAKVAFGTEGTPEI-THT-EVFHPEDEFL 227 (386)
T ss_dssp SSCEEEEEETTTTE---EEEEEECCS----EEEEEEEE-TTEEEEEETTSCEEEEECCSSSCCEE-EEC-CCCSCTTSCB
T ss_pred CCCeEEEEECCCCc---EEEEEECCC----cceeecCC-CceeEEECCCCCEEEEECCCCCeEEE-eec-ceeccccccc
Confidence 6899999998763 344443211 12222432 33566778888888888764333211 000 010 000
Q ss_pred -EEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccc---------c-CCCceeEEEeeCCC
Q 022111 153 -TSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQ---------M-HSDWVRSVAWAPNL 221 (302)
Q Consensus 153 -~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~---------~-h~~~v~~v~~~p~~ 221 (302)
....|.+ .++++++ .+.++.|++.|+.+...+ ....+. + ..+....++++|++
T Consensus 228 ~~~~~~~~-------------~dG~~~~-vs~~g~V~v~d~~~~~~~--v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~ 291 (386)
T 3sjl_D 228 INHPAYSQ-------------KAGRLVW-PTYTGKIHQIDLSSGDAK--FLPAVEALTEAERADGWRPGGWQQVAYHRAL 291 (386)
T ss_dssp CSCCEEET-------------TTTEEEE-EBTTSEEEEEECTTSSCE--ECCCEESSCHHHHHTTEEECSSSCEEEETTT
T ss_pred cccceeEc-------------CCCcEEE-EeCCCEEEEEECCCCcce--eecceeccccccccccccCCCcceeeECCCC
Confidence 0112211 1344433 455789999998654211 111110 0 12233457778886
Q ss_pred CCCccEEEEEec---------CCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCC-EEEEecC--CceEEeeecCC
Q 022111 222 GLPKSTIASASQ---------DGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGN-LLAVADA--NNVTLWKEAVD 289 (302)
Q Consensus 222 ~~~~~~l~s~s~---------D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~la~~~~--d~i~~w~~~~~ 289 (302)
+...++-.. ...|-+.|+.+.+. ..++.. ..++++|+|+|||+ +|.++.. +.|.++|....
T Consensus 292 ---~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv--~~~i~v--g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~ 364 (386)
T 3sjl_D 292 ---DRIYLLVDQRDEWRHKTASRFVVVLDAKTGER--LAKFEM--GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESG 364 (386)
T ss_dssp ---TEEEEEEEECCTTCTTSCEEEEEEEETTTCCE--EEEEEE--EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTC
T ss_pred ---CeEEEEeccccccccCCCCCEEEEEECCCCeE--EEEEEC--CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 233333321 24577777765432 122222 24689999999997 6666543 47999998766
Q ss_pred ceEEEeeec
Q 022111 290 GEWQQVSVV 298 (302)
Q Consensus 290 ~~~~~~~~~ 298 (302)
......+..
T Consensus 365 k~~~~i~~~ 373 (386)
T 3sjl_D 365 EELRSVNQL 373 (386)
T ss_dssp CEEEEECCC
T ss_pred cEEEEecCC
Confidence 555554444
No 215
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.80 E-value=3.9e-06 Score=74.51 Aligned_cols=230 Identities=12% Similarity=0.117 Sum_probs=128.2
Q ss_pred cCCCEEEE-eeCCCcEEEEeecCCC--ceEEEEec--------CcccCeEEEEeeCCCCCCEEEEEeCC------CeEEE
Q 022111 21 FYGKRLAT-ASSDSSIKIIGLSNSA--SQHLATLK--------GHRGPVWQVAWAHPKFGSILASCSYD------GQVII 83 (302)
Q Consensus 21 ~~~~~l~s-~~~d~~v~lw~~~~~~--~~~~~~~~--------~h~~~v~~v~~~~~~~~~~l~s~s~D------~~i~i 83 (302)
.++++|.. +-.++.|+++|+...+ .+...++. +-+ .-..+...++ | +++++..+ +.+.+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s-~Ph~~~~~pd--G-i~Vs~~g~~~g~~~g~v~v 168 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYS-RLHTVHCGPD--A-IYISALGNEEGEGPGGILM 168 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEE-EEEEEEECSS--C-EEEEEEEETTSCSCCEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCC-cccceeECCC--e-EEEEcCCCcCCCCCCeEEE
Confidence 67776665 5577889999985432 23334441 111 1123444443 6 77777666 78999
Q ss_pred EEcCCCCceeEEEEecC--CC-CCeeEEEecCCCCCcEEEEEe-------------------cCCcEEEEEecCCCCeee
Q 022111 84 WKEGNQNDWTQAHTFND--HK-SSVNSIAWAPHELGLSLACGS-------------------SDGNISVFTATADGGWDT 141 (302)
Q Consensus 84 wd~~~~~~~~~~~~~~~--h~-~~i~~l~~~pd~~~~~l~sg~-------------------~d~~v~~~~~~~~~~~~~ 141 (302)
.|.++.. .+.++.. .. ..-..+.|+|+ ++.+++.. .+.+|.+||+.+.. ..
T Consensus 169 lD~~T~~---v~~~~~~~~~~~~~~Yd~~~~p~--~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k--~~ 241 (462)
T 2ece_A 169 LDHYSFE---PLGKWEIDRGDQYLAYDFWWNLP--NEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK--RI 241 (462)
T ss_dssp ECTTTCC---EEEECCSBCTTCCCCCCEEEETT--TTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE--EE
T ss_pred EECCCCe---EEEEEccCCCCccccceEEECCC--CCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc--Ee
Confidence 9987653 3444431 22 22345788998 44666664 37899999987532 12
Q ss_pred eeeccc-CCCCeEEEEe--CCCCCCCceeecccCCCceeEEEee-----CCCcEEEEEEecCccccccc---cc------
Q 022111 142 TRIDQA-HPVGVTSVSW--APAMAPGALVGLGLLDPVQKLASCG-----CDNTVKVWKMYNGIWKMDCF---PA------ 204 (302)
Q Consensus 142 ~~~~~~-h~~~v~~~~~--~~~~~~~~~~~~~~~~~~~~l~s~~-----~D~~v~iwd~~~~~~~~~~~---~~------ 204 (302)
..+..+ .......+.| +|++ ...++++. .+++|.+|....+.+..... ..
T Consensus 242 ~tI~vg~~g~~P~~i~f~~~Pdg-------------~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~ 308 (462)
T 2ece_A 242 HSLTLGEENRMALELRPLHDPTK-------------LMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGN 308 (462)
T ss_dssp EEEESCTTEEEEEEEEECSSTTC-------------CEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSS
T ss_pred eEEecCCCCCccceeEeeECCCC-------------CEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccc
Confidence 222211 1112334444 6653 13345555 67788777665543321110 00
Q ss_pred -------cccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcc-eeeeeecc-C------------CCcEEE
Q 022111 205 -------LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQ-WEGRVLKD-F------------KTPVWS 263 (302)
Q Consensus 205 -------~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~-~~~~~~~~-~------------~~~v~~ 263 (302)
+.+-......|.+|||+. ...++.-..+.|.++|+...... ....+..+ . ...-..
T Consensus 309 lp~~~~~f~~~~~~pa~I~lS~DGr---fLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~ 385 (462)
T 2ece_A 309 LPEILKPFKAVPPLVTDIDISLDDK---FLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQM 385 (462)
T ss_dssp CCGGGGGGTEECCCCCCEEECTTSC---EEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCC
T ss_pred ccccccccccCCCceeEEEECCCCC---EEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCE
Confidence 111124578899999962 34455556789999998643211 11122111 0 012467
Q ss_pred EEEccCCCEEEEec
Q 022111 264 VSWSLTGNLLAVAD 277 (302)
Q Consensus 264 ~~~spdg~~la~~~ 277 (302)
+++||||++|.++.
T Consensus 386 ~~lSpDGk~LyVaN 399 (462)
T 2ece_A 386 LEISRDGRRVYVTN 399 (462)
T ss_dssp EEECTTSSEEEEEC
T ss_pred EEEcCCCCEEEEEc
Confidence 99999999999997
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.77 E-value=4.6e-07 Score=86.14 Aligned_cols=201 Identities=13% Similarity=0.077 Sum_probs=115.7
Q ss_pred CcccCeEEEEeeCCCCCCEEEE-----EeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCC-
Q 022111 53 GHRGPVWQVAWAHPKFGSILAS-----CSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDG- 126 (302)
Q Consensus 53 ~h~~~v~~v~~~~~~~~~~l~s-----~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~- 126 (302)
+|...+..++|+|+ |++||- |+...+|++||+.++... .. .+. ..+...++|+ | ++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpD--g~~lAy~~~~~G~~~~~i~v~dl~tg~~~-~~-~~~--~~k~~~~~Ws-D--g~~l~y~~~~~~ 196 (693)
T 3iuj_A 126 DGTTALDQLSFSRD--GRILAYSLSLAGSDWREIHLMDVESKQPL-ET-PLK--DVKFSGISWL-G--NEGFFYSSYDKP 196 (693)
T ss_dssp TSCCEEEEEEECTT--SSEEEEEEECSSCCEEEEEEEETTTCSEE-EE-EEE--EEESCCCEEE-T--TTEEEEEESSCC
T ss_pred CCcEEEEEEEECCC--CCEEEEEEecCCCceEEEEEEECCCCCCC-cc-ccC--CceeccEEEe-C--CCEEEEEEecCc
Confidence 35556788899874 888773 333467999999876421 11 121 1123577899 8 56788777774
Q ss_pred ------------cEEEEEecCCCCeeeeeec-cc-CCCCeEEEEeCCCCCCCceeecccCCCceeE-EEee---CCCcEE
Q 022111 127 ------------NISVFTATADGGWDTTRID-QA-HPVGVTSVSWAPAMAPGALVGLGLLDPVQKL-ASCG---CDNTVK 188 (302)
Q Consensus 127 ------------~v~~~~~~~~~~~~~~~~~-~~-h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~---~D~~v~ 188 (302)
.|++|++.+.......... .. |...+.++.|+|++ ++| ++.+ .++.|+
T Consensus 197 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg--------------~~l~~~~~~~~~~~~i~ 262 (693)
T 3iuj_A 197 DGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDD--------------RFLLISAANSTSGNRLY 262 (693)
T ss_dssp C-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTS--------------CEEEEEEESSSSCCEEE
T ss_pred ccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCC--------------CEEEEEEccCCCCcEEE
Confidence 3888887643321111111 12 33446788898874 443 4433 235789
Q ss_pred EEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecC---CeEEEEEeccCCc-ceeeeeeccCCCcEEEE
Q 022111 189 VWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQD---GTVVIWTCAKEGE-QWEGRVLKDFKTPVWSV 264 (302)
Q Consensus 189 iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D---~~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~ 264 (302)
++|+.++... ...+..+.+.+... |+|++ +..++....| +.|..+|+..... .|+ .+ ..+...+.
T Consensus 263 ~~d~~~~~~~---~~~l~~~~~~~~~~-~~~~g---~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~-~l-~~~~~~~~-- 331 (693)
T 3iuj_A 263 VKDLSQENAP---LLTVQGDLDADVSL-VDNKG---STLYLLTNRDAPNRRLVTVDAANPGPAHWR-DL-IPERQQVL-- 331 (693)
T ss_dssp EEETTSTTCC---CEEEECSSSSCEEE-EEEET---TEEEEEECTTCTTCEEEEEETTSCCGGGCE-EE-ECCCSSCE--
T ss_pred EEECCCCCCc---eEEEeCCCCceEEE-EeccC---CEEEEEECCCCCCCEEEEEeCCCCCccccE-EE-ecCCCCEE--
Confidence 9998765211 22344455555554 66664 2455555444 5688888765321 122 22 23333343
Q ss_pred EEccCCCEEEEecCC----ceEEeeec
Q 022111 265 SWSLTGNLLAVADAN----NVTLWKEA 287 (302)
Q Consensus 265 ~~spdg~~la~~~~d----~i~~w~~~ 287 (302)
.|+|+++.|+....+ .|++|+..
T Consensus 332 ~~s~~g~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 332 TVHSGSGYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp EEEEETTEEEEEEEETTEEEEEEECTT
T ss_pred EEEEECCEEEEEEEECCeeEEEEEECC
Confidence 899999988776443 37777754
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.73 E-value=2.9e-06 Score=72.09 Aligned_cols=201 Identities=12% Similarity=0.044 Sum_probs=115.0
Q ss_pred EEecCcccCeEEEEeeCCCCCC-EEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCc
Q 022111 49 ATLKGHRGPVWQVAWAHPKFGS-ILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGN 127 (302)
Q Consensus 49 ~~~~~h~~~v~~v~~~~~~~~~-~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~ 127 (302)
..+..+........|.++ ++ ++++...++.|..|+.. +. ...+..+...+..+++.|+ |.++++...++.
T Consensus 38 ~~l~~~~~~~egp~~~~~--g~~l~~~d~~~~~i~~~~~~-g~----~~~~~~~~~~~~gl~~d~d--G~l~v~~~~~~~ 108 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEA--QRTLVWSDLVGRRVLGWRED-GT----VDVLLDATAFTNGNAVDAQ--QRLVHCEHGRRA 108 (305)
T ss_dssp EEEECCCSSEEEEEEEGG--GTEEEEEETTTTEEEEEETT-SC----EEEEEESCSCEEEEEECTT--SCEEEEETTTTE
T ss_pred EEEecCCcCccCCeEeCC--CCEEEEEECCCCEEEEEeCC-CC----EEEEeCCCCccceeeECCC--CCEEEEECCCCE
Confidence 344444445667888764 55 67788888999999873 22 2334445677899999987 666665555678
Q ss_pred EEEEEecCCCCeeeee-eccc-CCCCeEEEEeCCCCCCCceeecccCCCceeEEE----eeC-------------CCcEE
Q 022111 128 ISVFTATADGGWDTTR-IDQA-HPVGVTSVSWAPAMAPGALVGLGLLDPVQKLAS----CGC-------------DNTVK 188 (302)
Q Consensus 128 v~~~~~~~~~~~~~~~-~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s----~~~-------------D~~v~ 188 (302)
|.+|+.. +...... .... ....+..+.+.|+ +..++| |.. .+.|.
T Consensus 109 v~~~~~~--g~~~~~~~~~~~~~~~~~~~i~~d~d--------------G~l~~td~~~g~~~~~~~~~~~~~~~~~~v~ 172 (305)
T 3dr2_A 109 ITRSDAD--GQAHLLVGRYAGKRLNSPNDLIVARD--------------GAIWFTDPPFGLRKPSQGCPADPELAHHSVY 172 (305)
T ss_dssp EEEECTT--SCEEEEECEETTEECSCCCCEEECTT--------------SCEEEECCSGGGSCGGGSCCCCCSSSCEEEE
T ss_pred EEEECCC--CCEEEEEeccCCCccCCCCCEEECCC--------------CCEEEeCcCCCccccccccccccccCCCeEE
Confidence 8888753 2222111 0001 0122445666654 355554 321 23455
Q ss_pred EEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecC------CeEEEEEeccCCcceeeeeecc-CCCcE
Q 022111 189 VWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQD------GTVVIWTCAKEGEQWEGRVLKD-FKTPV 261 (302)
Q Consensus 189 iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D------~~i~iwd~~~~~~~~~~~~~~~-~~~~v 261 (302)
.+|..++.. .. +. .....+.++|+||+ +.|..+... +.|.+|++.... ......... .....
T Consensus 173 ~~d~~~g~~--~~---~~-~~~~p~gl~~spdg----~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~p 241 (305)
T 3dr2_A 173 RLPPDGSPL--QR---MA-DLDHPNGLAFSPDE----QTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLP 241 (305)
T ss_dssp EECSSSCCC--EE---EE-EESSEEEEEECTTS----SEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCC
T ss_pred EEcCCCCcE--EE---Ee-cCCCCcceEEcCCC----CEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCC
Confidence 566544421 11 11 23346789999996 545554443 789999986432 111111111 12234
Q ss_pred EEEEEccCCCEEEEecCCceEEeee
Q 022111 262 WSVSWSLTGNLLAVADANNVTLWKE 286 (302)
Q Consensus 262 ~~~~~spdg~~la~~~~d~i~~w~~ 286 (302)
..+++.++|++.++. .++|.+|+.
T Consensus 242 dgi~~d~~G~lwv~~-~~gv~~~~~ 265 (305)
T 3dr2_A 242 DGFCVDRGGWLWSSS-GTGVCVFDS 265 (305)
T ss_dssp CSEEECTTSCEEECC-SSEEEEECT
T ss_pred CeEEECCCCCEEEec-CCcEEEECC
Confidence 568899999965554 568999986
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.67 E-value=3.1e-05 Score=66.40 Aligned_cols=195 Identities=7% Similarity=0.005 Sum_probs=111.2
Q ss_pred EEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCC
Q 022111 59 WQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGG 138 (302)
Q Consensus 59 ~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~ 138 (302)
....|+++ .+.++++...++.|..||..++. ...+. ....+.+++|.|+ +.++++. . ..|.+||.... .
T Consensus 52 egp~~~~~-~~~l~~~d~~~~~i~~~d~~~~~----~~~~~-~~~~v~~i~~~~d--g~l~v~~-~-~gl~~~d~~~g-~ 120 (326)
T 2ghs_A 52 EGPTFDPA-SGTAWWFNILERELHELHLASGR----KTVHA-LPFMGSALAKISD--SKQLIAS-D-DGLFLRDTATG-V 120 (326)
T ss_dssp EEEEEETT-TTEEEEEEGGGTEEEEEETTTTE----EEEEE-CSSCEEEEEEEET--TEEEEEE-T-TEEEEEETTTC-C
T ss_pred cCCeEeCC-CCEEEEEECCCCEEEEEECCCCc----EEEEE-CCCcceEEEEeCC--CeEEEEE-C-CCEEEEECCCC-c
Confidence 45678764 35677777788999999986542 22222 3467999999987 5555543 3 44888886533 2
Q ss_pred eeee-eecccC-CCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCC----CcEEEEEEecCccccccccccccCCCce
Q 022111 139 WDTT-RIDQAH-PVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD----NTVKVWKMYNGIWKMDCFPALQMHSDWV 212 (302)
Q Consensus 139 ~~~~-~~~~~h-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D----~~v~iwd~~~~~~~~~~~~~~~~h~~~v 212 (302)
.... ...... ...+..+.++|++ .++++...+ +...||.+.++. .. .+..+....
T Consensus 121 ~~~~~~~~~~~~~~~~~~i~~d~~G--------------~l~v~~~~~~~~~~~~~l~~~~~g~--~~---~~~~~~~~~ 181 (326)
T 2ghs_A 121 LTLHAELESDLPGNRSNDGRMHPSG--------------ALWIGTMGRKAETGAGSIYHVAKGK--VT---KLFADISIP 181 (326)
T ss_dssp EEEEECSSTTCTTEEEEEEEECTTS--------------CEEEEEEETTCCTTCEEEEEEETTE--EE---EEEEEESSE
T ss_pred EEEEeeCCCCCCCCCCCCEEECCCC--------------CEEEEeCCCcCCCCceEEEEEeCCc--EE---EeeCCCccc
Confidence 2211 111011 1246777777753 444443221 234455544332 11 111223346
Q ss_pred eEEEeeCCCCCCccEEEEEecCCeEEEEEec-cCC-cceeeeee---ccCCCcEEEEEEccCCCEEEEecC-CceEEeee
Q 022111 213 RSVAWAPNLGLPKSTIASASQDGTVVIWTCA-KEG-EQWEGRVL---KDFKTPVWSVSWSLTGNLLAVADA-NNVTLWKE 286 (302)
Q Consensus 213 ~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~-~~~-~~~~~~~~---~~~~~~v~~~~~spdg~~la~~~~-d~i~~w~~ 286 (302)
+.++|+|++. ...++.+.++.|.+|+++ ..+ ........ ........++++.++|++.++... +.|.+|+.
T Consensus 182 ~~i~~s~dg~---~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 182 NSICFSPDGT---TGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp EEEEECTTSC---EEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred CCeEEcCCCC---EEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence 7899999961 234555667899999985 111 11001111 112334678999999988776644 47999986
No 219
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.62 E-value=0.00017 Score=63.21 Aligned_cols=233 Identities=13% Similarity=0.041 Sum_probs=128.1
Q ss_pred EEccCCCEEEEeeC--CC---cEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEe----------CCCeEE
Q 022111 18 AMDFYGKRLATASS--DS---SIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCS----------YDGQVI 82 (302)
Q Consensus 18 ~~s~~~~~l~s~~~--d~---~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s----------~D~~i~ 82 (302)
...++++++.++.. .. +|.++|... .+.+..+.....+ .+.++++ ++.|+.+. .++.|.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t--~~~~~~i~~g~~p--~i~~spD--g~~lyv~n~~~~~~~rg~~~~~v~ 100 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGS--GSILGHVNGGFLP--NPVAAHS--GSEFALASTSFSRIAKGKRTDYVE 100 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCC--CeEEEEecCCCCC--CeEECCC--CCEEEEEeccccccccCCCCCeEE
Confidence 44578887776653 22 789998764 3455556543333 7899874 77776664 367899
Q ss_pred EEEcCCCCceeEEEEecCC-------CCCeeEEEecCCCCCcEEEEEec--CCcEEEEEecCCCCeeeee-ecccCCCCe
Q 022111 83 IWKEGNQNDWTQAHTFNDH-------KSSVNSIAWAPHELGLSLACGSS--DGNISVFTATADGGWDTTR-IDQAHPVGV 152 (302)
Q Consensus 83 iwd~~~~~~~~~~~~~~~h-------~~~i~~l~~~pd~~~~~l~sg~~--d~~v~~~~~~~~~~~~~~~-~~~~h~~~v 152 (302)
++|..+.. .+..+... ......++|+|| |++|+.+.. ++.|.++| .+.. . ... +. ...
T Consensus 101 viD~~t~~---~~~~i~~~~~~~~~~g~~p~~~~~spD--G~~l~v~n~~~~~~v~viD-~t~~-~-~~~~i~--~~~-- 168 (373)
T 2mad_H 101 VFDPVTFL---PIADIELPDAPRFDVGPYSWMNANTPN--NADLLFFQFAAGPAVGLVV-QGGS-S-DDQLLS--SPT-- 168 (373)
T ss_pred EEECCCCc---EEEEEECCCccccccCCCccceEECCC--CCEEEEEecCCCCeEEEEE-CCCC-E-EeEEcC--CCc--
Confidence 99987643 22322111 123458899998 667777663 57899999 6432 1 122 21 111
Q ss_pred EEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccc---cccccCCCce-eEEEeeCCCCCCccEE
Q 022111 153 TSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCF---PALQMHSDWV-RSVAWAPNLGLPKSTI 228 (302)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~---~~~~~h~~~v-~~v~~~p~~~~~~~~l 228 (302)
++.+.|.+ ...+++.+.|+.+.++|. ++... ... ..+ ....++ ....|.+++ ..+
T Consensus 169 -~~~~~~~~-------------~~~~~~~~~dg~~~~vd~-~g~~~-~~~~~~~~~-~~~~p~~~~~~~~~~~----~~~ 227 (373)
T 2mad_H 169 -CYHIHPGA-------------PSTFYLLCAQGGLAKTDH-AGGAA-GAGLVGAML-TAAQNLLTQPAQANKS----GRI 227 (373)
T ss_pred -eEEEEeCC-------------CceEEEEcCCCCEEEEEC-CCcEE-EEEeccccc-cCCcceeecceeEecC----CEE
Confidence 12223322 245667778999999998 55311 000 001 111121 234556653 233
Q ss_pred EEEecCCeEEEEEeccCCcceeeee--ec------c-CCCcEEEEEEccCCCEEEEecC-----------CceEEeeecC
Q 022111 229 ASASQDGTVVIWTCAKEGEQWEGRV--LK------D-FKTPVWSVSWSLTGNLLAVADA-----------NNVTLWKEAV 288 (302)
Q Consensus 229 ~s~s~D~~i~iwd~~~~~~~~~~~~--~~------~-~~~~v~~~~~spdg~~la~~~~-----------d~i~~w~~~~ 288 (302)
+..+..+.+.+.|+..........+ .. . .......++++||+++|.++.. +.|.+.|.+.
T Consensus 228 ~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t 307 (373)
T 2mad_H 228 VWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLV 307 (373)
T ss_pred EEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCC
Confidence 3334677888888754321100000 00 0 0122445889999987766532 2588888754
Q ss_pred C
Q 022111 289 D 289 (302)
Q Consensus 289 ~ 289 (302)
.
T Consensus 308 ~ 308 (373)
T 2mad_H 308 G 308 (373)
T ss_pred C
Confidence 3
No 220
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.61 E-value=1.2e-05 Score=71.66 Aligned_cols=239 Identities=12% Similarity=0.070 Sum_probs=130.6
Q ss_pred EEEEccCCCEEEEee----------CCCcEEEEeecCCCceEEEEec-C-c-----ccCeEEEEeeCCCCCCEEEEEeC-
Q 022111 16 DVAMDFYGKRLATAS----------SDSSIKIIGLSNSASQHLATLK-G-H-----RGPVWQVAWAHPKFGSILASCSY- 77 (302)
Q Consensus 16 ~~~~s~~~~~l~s~~----------~d~~v~lw~~~~~~~~~~~~~~-~-h-----~~~v~~v~~~~~~~~~~l~s~s~- 77 (302)
.+.++||+++|+.+. .++.|.++|.... +.+..+. + - ...-..+.|+++ |++|+.+..
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~--~vv~~I~v~g~~r~~~g~~P~~~~~spD--Gk~lyV~n~~ 197 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF--LPIADIELPDAPRFLVGTYQWMNALTPD--NKNLLFYQFS 197 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC--CEEEEEEETTCCCCCBSCCGGGSEECTT--SSEEEEEECS
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC--cEEEEEECCCccccccCCCcceEEEcCC--CCEEEEEecC
Confidence 689999999888775 3678999997653 3333332 1 0 112245788764 788777764
Q ss_pred -CCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeee---eecccCCCCe-
Q 022111 78 -DGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTT---RIDQAHPVGV- 152 (302)
Q Consensus 78 -D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~---~~~~~h~~~v- 152 (302)
+++|.+.|..+.. .+.++..-. +....|+. ...+++.+.|+.+.+.+. ..+..... .+. ....++
T Consensus 198 ~~~~VsVID~~t~k---vv~~I~v~g----~~~~~p~g-~~~~v~~~~dG~~~~V~~-~~~~v~~~~~~~~~-v~~~p~~ 267 (426)
T 3c75_H 198 PAPAVGVVDLEGKT---FDRMLDVPD----CYHIFPAS-PTVFYMNCRDGSLARVDF-ADGETKVTNTEVFH-TEDELLI 267 (426)
T ss_dssp SSCEEEEEETTTTE---EEEEEECCS----EEEEEEEE-TTEEEEEETTSSEEEEEC-CTTCCEEEECCCCS-CTTSCBC
T ss_pred CCCeEEEEECCCCe---EEEEEEcCC----ceeeccCC-CcEEEEEcCCCCEEEEEC-CCCcEEEEeeeeec-cCCCcee
Confidence 5789999987753 344443211 12333442 134556667777777666 22221100 000 000000
Q ss_pred EEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccc----------cCCCceeEEEeeCCCC
Q 022111 153 TSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQ----------MHSDWVRSVAWAPNLG 222 (302)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~----------~h~~~v~~v~~~p~~~ 222 (302)
..+.+.++ +..++..+..+.|.+.|+......+ ...+. .......-++++|++
T Consensus 268 ~~~~~~~d--------------g~~~~~~s~~g~V~ViD~~~~~~~v--~~~~~~~~~~~i~~g~~p~g~~~va~s~dg- 330 (426)
T 3c75_H 268 NHPAFSLR--------------SGRLVWPTYTGKIFQADLTAEGATF--RAPIEALTEAERADDWRPGGWQQTAYHRQS- 330 (426)
T ss_dssp SCCEECTT--------------TCEEEEEBTTSEEEEEEECSSCEEE--CCCEESSCTTTGGGTEEECSSSCEEEEGGG-
T ss_pred eEeeecCC--------------CCEEEEEeCCCcEEEEeccCCceEE--eeeeeeccccccccccccCCceeeEEcCCC-
Confidence 11222332 2444444567889999986532110 11000 011112236889986
Q ss_pred CCccEEEEEec---------CCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCC-EEEEecC--CceEEeeecCCc
Q 022111 223 LPKSTIASASQ---------DGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGN-LLAVADA--NNVTLWKEAVDG 290 (302)
Q Consensus 223 ~~~~~l~s~s~---------D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~la~~~~--d~i~~w~~~~~~ 290 (302)
+..+++... ++.|.+.|..+.+.. ..+. .....++++|+|||+ ++.++.. +.|.++|.....
T Consensus 331 --~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv--~~I~--vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 331 --DRIYLLVDQRDEWKHKAASRFVVVLNAETGERI--NKIE--LGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp --TEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE--EEEE--EEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred --CEEEEEecccccccccCCCCEEEEEECCCCeEE--EEEE--CCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 233444321 347999998764321 1221 123588999999999 8888763 479999987544
Q ss_pred e
Q 022111 291 E 291 (302)
Q Consensus 291 ~ 291 (302)
.
T Consensus 405 v 405 (426)
T 3c75_H 405 E 405 (426)
T ss_dssp E
T ss_pred E
Confidence 3
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.52 E-value=1.9e-07 Score=81.92 Aligned_cols=186 Identities=13% Similarity=0.114 Sum_probs=90.2
Q ss_pred CCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccC
Q 022111 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAH 148 (302)
Q Consensus 69 ~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h 148 (302)
+.+|++++.|+.|..||..++. .+.++.. +.+.+..+.++ +..+++++.|+.++.||..++......... .
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~---~~W~~~~--~~~~s~p~~~~--g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~--~ 79 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGS---IKWTLKE--DPVLQVPTHVE--EPAFLPDPNDGSLYTLGSKNNEGLTKLPFT--I 79 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCC---EEEEEEC--CCSCCCC-------CCEEECTTTCCEEEC-----CCSEECSCC--H
T ss_pred CCEEEEEcCCCEEEEEECCCCC---EEEEecC--CCceecceEcC--CCEEEEeCCCCEEEEEECCCCceeeeeecc--C
Confidence 5788999999999999987764 3344443 34444444444 456777789999999998643321111110 0
Q ss_pred CCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEE
Q 022111 149 PVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTI 228 (302)
Q Consensus 149 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l 228 (302)
...+ ..+|. ...+..+++++.|+.++.||..++.. +-.+..+. ...++|+ +..|
T Consensus 80 ~~~~---~~sp~-----------~~~~~~v~~g~~dg~v~a~D~~tG~~----~w~~~~~~----~~~~~p~----~~~v 133 (369)
T 2hz6_A 80 PELV---QASPC-----------RSSDGILYMGKKQDIWYVIDLLTGEK----QQTLSSAF----ADSLSPS----TSLL 133 (369)
T ss_dssp HHHH---TTCSC-----------C-----CCCCEEEEEEEEECCC----------------------------------E
T ss_pred cccc---ccCce-----------EecCCEEEEEeCCCEEEEEECCCCcE----EEEecCCC----ccccccc----CCEE
Confidence 0000 00110 00135677888899999999987742 12222222 2345665 3678
Q ss_pred EEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCC---CEEEEecCC-ceEEeeecCCce-EEE
Q 022111 229 ASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTG---NLLAVADAN-NVTLWKEAVDGE-WQQ 294 (302)
Q Consensus 229 ~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg---~~la~~~~d-~i~~w~~~~~~~-~~~ 294 (302)
++++.|+.|+.||.++....|.... ... .+.++++++ ..+.+++.+ .+..||...... |..
T Consensus 134 ~~~~~dg~v~a~d~~tG~~~W~~~~-~~~----~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 199 (369)
T 2hz6_A 134 YLGRTEYTITMYDTKTRELRWNATY-FDY----AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQ 199 (369)
T ss_dssp EEEEEEEEEECCCSSSSSCCCEEEE-EEE----CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEE
T ss_pred EEEecCCEEEEEECCCCCEEEeEec-ccc----cCccccCCccccceEEEECCCCEEEEEECCCCcEEEEe
Confidence 8999999999999876554454222 111 122233321 334445555 688888643332 543
No 222
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.50 E-value=1e-07 Score=83.65 Aligned_cols=205 Identities=16% Similarity=0.128 Sum_probs=104.6
Q ss_pred CCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecCC
Q 022111 22 YGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDH 101 (302)
Q Consensus 22 ~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h 101 (302)
++..+++++.|+.|+.||..++ +.+..+.. +.+.+..+.. ++.++++++.|+.+..||.+++.. +..+..+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG--~~~W~~~~--~~~~s~p~~~--~g~~~v~~s~dg~l~a~d~~tG~~---~w~~~~~ 78 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTG--SIKWTLKE--DPVLQVPTHV--EEPAFLPDPNDGSLYTLGSKNNEG---LTKLPFT 78 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTC--CEEEEEEC--CCSCCCC-------CCEEECTTTCCEEEC-----CC---SEECSCC
T ss_pred eCCEEEEEcCCCEEEEEECCCC--CEEEEecC--CCceecceEc--CCCEEEEeCCCCEEEEEECCCCce---eeeeecc
Confidence 4678999999999999997654 34444443 3444333332 256788888999999999866532 2222222
Q ss_pred CC-CeeEEEecCCC-CCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEE
Q 022111 102 KS-SVNSIAWAPHE-LGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLA 179 (302)
Q Consensus 102 ~~-~i~~l~~~pd~-~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~ 179 (302)
.. .+. -+|-. .+..+++|+.++.+..||..++.. ...+. .+. ....+| .+..++
T Consensus 79 ~~~~~~---~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~--~w~~~-~~~----~~~~~p--------------~~~~v~ 134 (369)
T 2hz6_A 79 IPELVQ---ASPCRSSDGILYMGKKQDIWYVIDLLTGEK--QQTLS-SAF----ADSLSP--------------STSLLY 134 (369)
T ss_dssp HHHHHT---TCSCC-----CCCCEEEEEEEEECCC-------------------------------------------EE
T ss_pred Cccccc---cCceEecCCEEEEEeCCCEEEEEECCCCcE--EEEec-CCC----cccccc--------------cCCEEE
Confidence 11 110 11210 123577888899999998765432 12221 111 112233 146788
Q ss_pred EeeCCCcEEEEEEecCc--cccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccC
Q 022111 180 SCGCDNTVKVWKMYNGI--WKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDF 257 (302)
Q Consensus 180 s~~~D~~v~iwd~~~~~--~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~ 257 (302)
+++.|+.|+.||..++. |.+. ... .....+.++... ...+..++.|+.|+.||.++....|... .
T Consensus 135 ~~~~dg~v~a~d~~tG~~~W~~~----~~~----~~~~~~~~~~~~-~~~v~~~~~dg~v~a~d~~tG~~~W~~~----~ 201 (369)
T 2hz6_A 135 LGRTEYTITMYDTKTRELRWNAT----YFD----YAASLPEDDVDY-KMSHFVSNGDGLVVTVDSESGDVLWIQN----Y 201 (369)
T ss_dssp EEEEEEEEECCCSSSSSCCCEEE----EEE----ECCBCCCCCTTC-CCCEEEEETSCEEEEECTTTCCEEEEEE----C
T ss_pred EEecCCEEEEEECCCCCEEEeEe----ccc----ccCccccCCccc-cceEEEECCCCEEEEEECCCCcEEEEec----C
Confidence 88899999999998764 2211 111 112222222111 1457788999999999987655445422 3
Q ss_pred CCcEE-EEEEccCCCE
Q 022111 258 KTPVW-SVSWSLTGNL 272 (302)
Q Consensus 258 ~~~v~-~~~~spdg~~ 272 (302)
..++. ...++++|..
T Consensus 202 ~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 202 ASPVVAFYVWQREGLR 217 (369)
T ss_dssp SSCEEEEEECTTSSCE
T ss_pred CCceEEEEEecCCceE
Confidence 44554 3456677753
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.46 E-value=2.3e-05 Score=67.75 Aligned_cols=211 Identities=9% Similarity=-0.008 Sum_probs=115.1
Q ss_pred cCeEEEEeeCCCCCCEEEEEe--CCCeEEEEEcCCCCceeEEEEe-------cCCCCCeeEEEecCCCCCcEEEEEec--
Q 022111 56 GPVWQVAWAHPKFGSILASCS--YDGQVIIWKEGNQNDWTQAHTF-------NDHKSSVNSIAWAPHELGLSLACGSS-- 124 (302)
Q Consensus 56 ~~v~~v~~~~~~~~~~l~s~s--~D~~i~iwd~~~~~~~~~~~~~-------~~h~~~i~~l~~~pd~~~~~l~sg~~-- 124 (302)
.....|+++++ |+++++.. .++.++||.+.++ .+..+ ..+...+..+++.|+ +.++++-..
T Consensus 17 ~~p~~va~~~~--g~~~v~~~~~~~~~~~l~~~~~g----~~~~~p~~~~~~~~~~~~p~gv~~d~~--g~L~v~D~g~~ 88 (343)
T 2qe8_A 17 LAPGNITLTPD--GRLFLSLHQFYQPEMQVAELTQD----GLIPFPPQSGNAIITFDTVLGIKSDGN--GIVWMLDNGNQ 88 (343)
T ss_dssp SCEEEEEECTT--SCEEEEECGGGCCSCSEEEEETT----EEEESCCCCSSCCCCCSCEEEEEECSS--SEEEEEECHHH
T ss_pred CCcceEEECCC--CCEEEEeCCCCCCceEEEEECCC----CeecCCCcccCcccceeEeeEEEEcCC--CcEEEEcCCCC
Confidence 56788998753 78888864 2343666666422 12222 234567899999887 544444333
Q ss_pred ---CCcEEEEEecCCCCeeeeeecc---cCCCCeEEEEeCCCCCCCceeecccCCCceeEEEee---CCCcEEEEEEecC
Q 022111 125 ---DGNISVFTATADGGWDTTRIDQ---AHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCG---CDNTVKVWKMYNG 195 (302)
Q Consensus 125 ---d~~v~~~~~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~---~D~~v~iwd~~~~ 195 (302)
+..|.+||..+........+.. .+......++++|.. +..+++.. .++.|.+||+.++
T Consensus 89 ~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~-------------g~~yvtd~~~~~~~~i~v~d~~~g 155 (343)
T 2qe8_A 89 SKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIH-------------NFVYISDPAPDDKAALIRVDLQTG 155 (343)
T ss_dssp HTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTT-------------TEEEEEECCSGGGCEEEEEETTTC
T ss_pred cCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCC-------------CEEEEEcCccCCCCeEEEEECCCC
Confidence 5788889876432121112110 111224556665432 35566665 6788999998654
Q ss_pred cccccccc------------cccc--------------CCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccC--C-
Q 022111 196 IWKMDCFP------------ALQM--------------HSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKE--G- 246 (302)
Q Consensus 196 ~~~~~~~~------------~~~~--------------h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~--~- 246 (302)
... ..+. ...+ ....++.|+|+|++ +.|..+..++. ++|.+... .
T Consensus 156 ~~~-r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg----~~ly~~~~~~~-~l~~~~~~~~~~ 229 (343)
T 2qe8_A 156 LAA-RVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAEN----EWLYLSPMHST-SMYRIKSADLSN 229 (343)
T ss_dssp CEE-EECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTS----CEEEEEESSCS-EEEEEEHHHHTC
T ss_pred CEE-EEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCC----CEEEEEeCCCC-eEEEEEHHHhcC
Confidence 211 0000 0000 01236889999985 56766666654 55554321 0
Q ss_pred -cceeeee-----eccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCceEEE
Q 022111 247 -EQWEGRV-----LKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQ 294 (302)
Q Consensus 247 -~~~~~~~-----~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~~~~ 294 (302)
.....+. ..+.......++++++|+++++...+ .|.+|+.. +|.+..
T Consensus 230 ~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~-~G~~~~ 283 (343)
T 2qe8_A 230 LQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSA-DRAYKL 283 (343)
T ss_dssp TTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETT-TTEEEE
T ss_pred CCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECC-CCCEEE
Confidence 0000000 01112245579999999988777665 79999962 355443
No 224
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.41 E-value=9.8e-05 Score=64.69 Aligned_cols=239 Identities=10% Similarity=0.044 Sum_probs=130.7
Q ss_pred EEEccCCCEEEEeeC-----CCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEe----------CCCeE
Q 022111 17 VAMDFYGKRLATASS-----DSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCS----------YDGQV 81 (302)
Q Consensus 17 ~~~s~~~~~l~s~~~-----d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s----------~D~~i 81 (302)
....|+++.++.... ++.|.++|..+ .+.+..+..-..+ .+.++++ |++|+.++ .++.|
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t--~~v~~~I~vG~~P--~va~spD--G~~lyVan~~~~r~~~G~~~~~V 111 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEA--GRVIGMIDGGFLP--NPVVADD--GSFIAHASTVFSRIARGERTDYV 111 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTT--TEEEEEEEECSSC--EEEECTT--SSCEEEEEEEEEETTEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCC--CeEEEEEECCCCC--cEEECCC--CCEEEEEcccccccccCCCCCEE
Confidence 345789988887765 67899988754 4555555433334 4888874 77665554 36789
Q ss_pred EEEEcCCCCceeEEEEecCC-------CCCeeEEEecCCCCCcEEEEEe--cCCcEEEEEecCCCCeeeeeecccCCCCe
Q 022111 82 IIWKEGNQNDWTQAHTFNDH-------KSSVNSIAWAPHELGLSLACGS--SDGNISVFTATADGGWDTTRIDQAHPVGV 152 (302)
Q Consensus 82 ~iwd~~~~~~~~~~~~~~~h-------~~~i~~l~~~pd~~~~~l~sg~--~d~~v~~~~~~~~~~~~~~~~~~~h~~~v 152 (302)
.+||..+.. .+.++... ......++|+|| |+++..+. .++.|.++|..+.... ..+.... .
T Consensus 112 sviD~~t~~---v~~~I~v~~g~r~~~g~~P~~~a~spD--Gk~lyVan~~~~~~VsVID~~t~~vv--~tI~v~g---~ 181 (386)
T 3sjl_D 112 EVFDPVTLL---PTADIELPDAPRFLVGTYPWMTSLTPD--GKTLLFYQFSPAPAVGVVDLEGKAFK--RMLDVPD---C 181 (386)
T ss_dssp EEECTTTCC---EEEEEEETTCCCCCBSCCGGGEEECTT--SSEEEEEECSSSCEEEEEETTTTEEE--EEEECCS---E
T ss_pred EEEECCCCe---EEEEEECCCccccccCCCCceEEEcCC--CCEEEEEEcCCCCeEEEEECCCCcEE--EEEECCC---c
Confidence 999998764 33333211 124567899998 66666665 3689999998654211 2221110 1
Q ss_pred EEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEec-CccccccccccccCCCcee-EEEee-CCCCCCccEEE
Q 022111 153 TSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYN-GIWKMDCFPALQMHSDWVR-SVAWA-PNLGLPKSTIA 229 (302)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~-~~~~~~~~~~~~~h~~~v~-~v~~~-p~~~~~~~~l~ 229 (302)
...+ |.+ ...+++.+.||.+-+.++.+ +.........+..-..++. ...|. +++ . ++
T Consensus 182 -~~~~-P~g-------------~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG----~-~~ 241 (386)
T 3sjl_D 182 -YHIF-PTA-------------PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG----R-LV 241 (386)
T ss_dssp -EEEE-EEE-------------TTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT----E-EE
T ss_pred -ceee-cCC-------------CceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC----c-EE
Confidence 1111 211 24566777788888888765 3210000001111112222 13554 443 3 44
Q ss_pred EEecCCeEEEEEeccCCcceeeeee--------ccC-CCcEEEEEEccCCCEEEEecC-----------CceEEeeecCC
Q 022111 230 SASQDGTVVIWTCAKEGEQWEGRVL--------KDF-KTPVWSVSWSLTGNLLAVADA-----------NNVTLWKEAVD 289 (302)
Q Consensus 230 s~s~D~~i~iwd~~~~~~~~~~~~~--------~~~-~~~v~~~~~spdg~~la~~~~-----------d~i~~w~~~~~ 289 (302)
-.+.++.+.+.|............. .+. ......++++|+++++.++.. +.|.+.|....
T Consensus 242 ~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~ 321 (386)
T 3sjl_D 242 WPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG 321 (386)
T ss_dssp EEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTC
T ss_pred EEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCC
Confidence 4667899999998653211100110 000 112234778999888766532 24777776544
Q ss_pred ce
Q 022111 290 GE 291 (302)
Q Consensus 290 ~~ 291 (302)
..
T Consensus 322 kv 323 (386)
T 3sjl_D 322 ER 323 (386)
T ss_dssp CE
T ss_pred eE
Confidence 33
No 225
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.41 E-value=3.3e-05 Score=67.47 Aligned_cols=90 Identities=13% Similarity=-0.049 Sum_probs=59.1
Q ss_pred cEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEe----------CCCeEEEEEcCCCCceeEEEEecCC--
Q 022111 34 SIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCS----------YDGQVIIWKEGNQNDWTQAHTFNDH-- 101 (302)
Q Consensus 34 ~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s----------~D~~i~iwd~~~~~~~~~~~~~~~h-- 101 (302)
+|.++|..+ .+.+.++..-..+ .+.|+++ +++++.+. .+++|.+||..+.. .+.++...
T Consensus 47 ~vsvID~~t--~~v~~~i~vG~~P--~i~~spD--g~~lyVan~~~~r~~~G~~~~~VsviD~~T~~---vv~~I~v~~~ 117 (368)
T 1mda_H 47 ENWVSCAGC--GVTLGHSLGAFLS--LAVAGHS--GSDFALASTSFARSAKGKRTDYVEVFDPVTFL---PIADIELPDA 117 (368)
T ss_dssp EEEEEETTT--TEEEEEEEECTTC--EEEECTT--SSCEEEEEEEETTTTSSSEEEEEEEECTTTCC---EEEEEEETTS
T ss_pred eEEEEECCC--CeEEEEEeCCCCC--ceEECCC--CCEEEEEcccccccccCCCCCEEEEEECCCCC---EEEEEECCCc
Confidence 788888754 4556666433345 6899875 67666664 37889999998764 34444322
Q ss_pred -----CCCeeEEEecCCCCCcEEEEEec--CCcEEE--EEec
Q 022111 102 -----KSSVNSIAWAPHELGLSLACGSS--DGNISV--FTAT 134 (302)
Q Consensus 102 -----~~~i~~l~~~pd~~~~~l~sg~~--d~~v~~--~~~~ 134 (302)
......++++|| |++++.+.. ++.+.+ +|..
T Consensus 118 ~~~~~g~~P~~ia~SpD--Gk~lyVan~~~~~~v~V~~iD~~ 157 (368)
T 1mda_H 118 PRFSVGPRVHIIGNCAS--SACLLFFLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp CSCCBSCCTTSEEECTT--SSCEEEEECSSSCEEEEEETTTE
T ss_pred cccccCCCcceEEEcCC--CCEEEEEccCCCCeEEEEEEchh
Confidence 123568899998 666776653 466888 7764
No 226
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.22 E-value=0.00029 Score=62.61 Aligned_cols=237 Identities=12% Similarity=0.048 Sum_probs=127.7
Q ss_pred cCCCEEEEeeCC-----CcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEe----------CCCeEEEEE
Q 022111 21 FYGKRLATASSD-----SSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCS----------YDGQVIIWK 85 (302)
Q Consensus 21 ~~~~~l~s~~~d-----~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s----------~D~~i~iwd 85 (302)
++++.++.+... +.|.++|..+ .+.+.++.--..+ .+.++++ +++|+.+. .++.|.++|
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t--~~vv~~I~vG~~P--gia~SpD--gk~lyVan~~~~~~~~G~~~~~VsviD 155 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGST--GRILGMTDGGFLP--HPVAAED--GSFFAQASTVFERIARGKRTDYVEVFD 155 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTT--TEEEEEEEECSSC--EEEECTT--SSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCC--CEEEEEEECCCCC--ceEECCC--CCEEEEEeccccccccCCCCCEEEEEE
Confidence 566666655442 6899999765 4555555432334 7899875 67665554 467899999
Q ss_pred cCCCCceeEEEEecCC-------CCCeeEEEecCCCCCcEEEEEec--CCcEEEEEecCCCCeeeeeecccCCCCeEEEE
Q 022111 86 EGNQNDWTQAHTFNDH-------KSSVNSIAWAPHELGLSLACGSS--DGNISVFTATADGGWDTTRIDQAHPVGVTSVS 156 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~h-------~~~i~~l~~~pd~~~~~l~sg~~--d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 156 (302)
..+.. .+.++... ......++|+|| |++++.+.. ++.|.+.|..+... ...+.... . ..
T Consensus 156 ~~t~~---vv~~I~v~g~~r~~~g~~P~~~~~spD--Gk~lyV~n~~~~~~VsVID~~t~kv--v~~I~v~g---~--~~ 223 (426)
T 3c75_H 156 PVTFL---PIADIELPDAPRFLVGTYQWMNALTPD--NKNLLFYQFSPAPAVGVVDLEGKTF--DRMLDVPD---C--YH 223 (426)
T ss_dssp TTTCC---EEEEEEETTCCCCCBSCCGGGSEECTT--SSEEEEEECSSSCEEEEEETTTTEE--EEEEECCS---E--EE
T ss_pred CCCCc---EEEEEECCCccccccCCCcceEEEcCC--CCEEEEEecCCCCeEEEEECCCCeE--EEEEEcCC---c--ee
Confidence 87764 33333211 123467889998 667777653 57899998764321 12222111 1 11
Q ss_pred eCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCce-eEEEeeCCCCCCccEEEEEecCC
Q 022111 157 WAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWV-RSVAWAPNLGLPKSTIASASQDG 235 (302)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v-~~v~~~p~~~~~~~~l~s~s~D~ 235 (302)
..|.+ ...+++.+.|+.+.+.++.++.........+.....++ ..+.|.|++ ..++..+..+
T Consensus 224 ~~p~g-------------~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg----~~~~~~s~~g 286 (426)
T 3c75_H 224 IFPAS-------------PTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRS----GRLVWPTYTG 286 (426)
T ss_dssp EEEEE-------------TTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTT----CEEEEEBTTS
T ss_pred eccCC-------------CcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCC----CEEEEEeCCC
Confidence 11211 14556667788888777743311100001111111111 235667775 4555556788
Q ss_pred eEEEEEeccCCcceee--eeec----cC---CCcEEEEEEccCCCEEEEec-----------CCceEEeeecCCceE
Q 022111 236 TVVIWTCAKEGEQWEG--RVLK----DF---KTPVWSVSWSLTGNLLAVAD-----------ANNVTLWKEAVDGEW 292 (302)
Q Consensus 236 ~i~iwd~~~~~~~~~~--~~~~----~~---~~~v~~~~~spdg~~la~~~-----------~d~i~~w~~~~~~~~ 292 (302)
.+.+.|.......... .+.. .. ......++|+|||+++.++. ++.|.+.|......-
T Consensus 287 ~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv 363 (426)
T 3c75_H 287 KIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERI 363 (426)
T ss_dssp EEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE
T ss_pred cEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEE
Confidence 9999998543210000 0000 00 01122378999998776653 235888887655443
No 227
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.19 E-value=0.00044 Score=57.36 Aligned_cols=199 Identities=8% Similarity=0.021 Sum_probs=116.2
Q ss_pred eeEEEEccCCCEEEEeeC--CCcEEEEeecCCCceEEEEe--cCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCC
Q 022111 14 VHDVAMDFYGKRLATASS--DSSIKIIGLSNSASQHLATL--KGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQ 89 (302)
Q Consensus 14 v~~~~~s~~~~~l~s~~~--d~~v~lw~~~~~~~~~~~~~--~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~ 89 (302)
...+.|++++...++.+. ++.|+++|..+.. .+..+ ..+. ..-.+.+.. +.+.++.-.++.+.++|..+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~--v~~~i~l~~~~-fgeGi~~~g---~~lyv~t~~~~~v~viD~~t~ 96 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGK--VENIHKMDDSY-FGEGLTLLN---EKLYQVVWLKNIGFIYDRRTL 96 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCC--EEEEEECCTTC-CEEEEEEET---TEEEEEETTCSEEEEEETTTT
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCC--EEEEEecCCCc-ceEEEEEeC---CEEEEEEecCCEEEEEECCCC
Confidence 568999998765555554 5789999986543 34443 2321 223566542 355555567899999998765
Q ss_pred CceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCC---CeEEEEeCCCCCCCce
Q 022111 90 NDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPV---GVTSVSWAPAMAPGAL 166 (302)
Q Consensus 90 ~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~~~ 166 (302)
+.+.++...... ...+++| +..+..+..++.+.+.|..+.......... .... ..+.+.|. +
T Consensus 97 ---~v~~~i~~g~~~--g~glt~D--g~~l~vs~gs~~l~viD~~t~~v~~~I~Vg-~~~~p~~~~nele~~-d------ 161 (266)
T 2iwa_A 97 ---SNIKNFTHQMKD--GWGLATD--GKILYGSDGTSILYEIDPHTFKLIKKHNVK-YNGHRVIRLNELEYI-N------ 161 (266)
T ss_dssp ---EEEEEEECCSSS--CCEEEEC--SSSEEEECSSSEEEEECTTTCCEEEEEECE-ETTEECCCEEEEEEE-T------
T ss_pred ---cEEEEEECCCCC--eEEEEEC--CCEEEEECCCCeEEEEECCCCcEEEEEEEC-CCCcccccceeEEEE-C------
Confidence 344555322111 2335566 444555556888988886543222111111 1111 23445554 2
Q ss_pred eecccCCCceeEEEeeCCCcEEEEEEecCcccccc-cccc------ccC--CCceeEEEeeCCCCCCccEEEEEecCCeE
Q 022111 167 VGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDC-FPAL------QMH--SDWVRSVAWAPNLGLPKSTIASASQDGTV 237 (302)
Q Consensus 167 ~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~-~~~~------~~h--~~~v~~v~~~p~~~~~~~~l~s~s~D~~i 237 (302)
+..++....++.|.+.|..++.-.-.. ...+ ..+ ....+.|+|+|++ ...++++.....|
T Consensus 162 --------g~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~---~~lfVTgk~~~~v 230 (266)
T 2iwa_A 162 --------GEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQEN---KRIFVTGKLWPKL 230 (266)
T ss_dssp --------TEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTT---TEEEEEETTCSEE
T ss_pred --------CEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCC---CEEEEECCCCCeE
Confidence 456677767889999998776321110 0000 011 1356899999996 4688888888888
Q ss_pred EEEEecc
Q 022111 238 VIWTCAK 244 (302)
Q Consensus 238 ~iwd~~~ 244 (302)
...++..
T Consensus 231 ~~i~l~~ 237 (266)
T 2iwa_A 231 FEIKLHL 237 (266)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 8888764
No 228
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.12 E-value=0.00025 Score=63.02 Aligned_cols=195 Identities=12% Similarity=0.152 Sum_probs=106.3
Q ss_pred CEEEEEeCCCeEEEEEcCCC-CceeEEEEec------C-CCCCeeEEEecCCCCCcEEEEEecC------CcEEEEEecC
Q 022111 70 SILASCSYDGQVIIWKEGNQ-NDWTQAHTFN------D-HKSSVNSIAWAPHELGLSLACGSSD------GNISVFTATA 135 (302)
Q Consensus 70 ~~l~s~s~D~~i~iwd~~~~-~~~~~~~~~~------~-h~~~i~~l~~~pd~~~~~l~sg~~d------~~v~~~~~~~ 135 (302)
.+++++..+.+|.+.|..+. ...+..+++. . .....-.+...|+ | +++++..+ +.+.++|..+
T Consensus 97 ~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pd--G-i~Vs~~g~~~g~~~g~v~vlD~~T 173 (462)
T 2ece_A 97 FLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPD--A-IYISALGNEEGEGPGGILMLDHYS 173 (462)
T ss_dssp EEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSS--C-EEEEEEEETTSCSCCEEEEECTTT
T ss_pred EEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCC--e-EEEEcCCCcCCCCCCeEEEEECCC
Confidence 35677788999999998533 2223444442 0 1112345566787 5 44455444 6788887654
Q ss_pred CCCeeeeeecccCCCC-eEEEEeCCCCCCCceeecccCCCceeEEEee-------------------CCCcEEEEEEecC
Q 022111 136 DGGWDTTRIDQAHPVG-VTSVSWAPAMAPGALVGLGLLDPVQKLASCG-------------------CDNTVKVWKMYNG 195 (302)
Q Consensus 136 ~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-------------------~D~~v~iwd~~~~ 195 (302)
.......... ..... -..+-|+|+. +.+++.. .+..|.+||+.++
T Consensus 174 ~~v~~~~~~~-~~~~~~~Yd~~~~p~~--------------~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~ 238 (462)
T 2ece_A 174 FEPLGKWEID-RGDQYLAYDFWWNLPN--------------EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR 238 (462)
T ss_dssp CCEEEECCSB-CTTCCCCCCEEEETTT--------------TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT
T ss_pred CeEEEEEccC-CCCccccceEEECCCC--------------CEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC
Confidence 3211111111 11111 1234556543 4555553 4788999999865
Q ss_pred cccccccccccc--CCCceeEEEe--eCCCCCCccEEEEEe-----cCCeEEEEEeccCCcceeeeee------------
Q 022111 196 IWKMDCFPALQM--HSDWVRSVAW--APNLGLPKSTIASAS-----QDGTVVIWTCAKEGEQWEGRVL------------ 254 (302)
Q Consensus 196 ~~~~~~~~~~~~--h~~~v~~v~~--~p~~~~~~~~l~s~s-----~D~~i~iwd~~~~~~~~~~~~~------------ 254 (302)
. ...++.. .......|.| +|++. ..+++.. .+++|.+|..+. ..|.....
T Consensus 239 k----~~~tI~vg~~g~~P~~i~f~~~Pdg~---~aYV~~e~~~~~Lss~V~v~~~d~--g~~~~~~vIdi~~~~v~~~l 309 (462)
T 2ece_A 239 K----RIHSLTLGEENRMALELRPLHDPTKL---MGFINMVVSLKDLSSSIWLWFYED--GKWNAEKVIEIPAEPLEGNL 309 (462)
T ss_dssp E----EEEEEESCTTEEEEEEEEECSSTTCC---EEEEEEEEETTTCCEEEEEEEEET--TEEEEEEEEEECCEECCSSC
T ss_pred c----EeeEEecCCCCCccceeEeeECCCCC---EEEEEEeeeccCCCceEEEEEecC--CceeEEEEEeCCCccccccc
Confidence 2 2222222 1123445655 89862 3444555 677887776643 11211110
Q ss_pred ----ccC---CCcEEEEEEccCCCEEEEecC--CceEEeeecCCce
Q 022111 255 ----KDF---KTPVWSVSWSLTGNLLAVADA--NNVTLWKEAVDGE 291 (302)
Q Consensus 255 ----~~~---~~~v~~~~~spdg~~la~~~~--d~i~~w~~~~~~~ 291 (302)
.++ ......+.+||||++|-++.. +.|.+++..+.+.
T Consensus 310 p~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~ 355 (462)
T 2ece_A 310 PEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFK 355 (462)
T ss_dssp CGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTS
T ss_pred cccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCC
Confidence 001 123678999999999988855 4799999865544
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.08 E-value=0.00073 Score=63.93 Aligned_cols=57 Identities=14% Similarity=0.317 Sum_probs=38.8
Q ss_pred CeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCceEEEe
Q 022111 235 GTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQV 295 (302)
Q Consensus 235 ~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~~~~~ 295 (302)
+.|..||+.+.+..|... +..++++..++++|.++.+++.+ .++.||........+.
T Consensus 457 g~l~A~D~~tG~~~W~~~----~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVE----HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEA 514 (677)
T ss_dssp EEEEEEETTTTEEEEEEE----ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cEEEEEeCCCCcEEeecC----CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeee
Confidence 789999987765445422 23445666677788888888777 7999998665554443
No 230
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.05 E-value=0.0003 Score=61.39 Aligned_cols=69 Identities=10% Similarity=0.030 Sum_probs=47.4
Q ss_pred EEEEccCCCEEEEee----------CCCcEEEEeecCCCceEEEEecCc-------ccCeEEEEeeCCCCCCEEEEEeC-
Q 022111 16 DVAMDFYGKRLATAS----------SDSSIKIIGLSNSASQHLATLKGH-------RGPVWQVAWAHPKFGSILASCSY- 77 (302)
Q Consensus 16 ~~~~s~~~~~l~s~~----------~d~~v~lw~~~~~~~~~~~~~~~h-------~~~v~~v~~~~~~~~~~l~s~s~- 77 (302)
.+.++||+++++.+. .+++|.+||..+. +.+..+..+ ...-..+.|+++ |++|+.+..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~--~vv~~I~v~~~~~~~~g~~P~~ia~SpD--Gk~lyVan~~ 144 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF--LPIADIELPDAPRFSVGPRVHIIGNCAS--SACLLFFLFG 144 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC--CEEEEEEETTSCSCCBSCCTTSEEECTT--SSCEEEEECS
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC--CEEEEEECCCccccccCCCcceEEEcCC--CCEEEEEccC
Confidence 689999999888876 3688999998653 445554322 012346788864 788877764
Q ss_pred -CCeEEE--EEcCC
Q 022111 78 -DGQVII--WKEGN 88 (302)
Q Consensus 78 -D~~i~i--wd~~~ 88 (302)
+..+.+ +|..+
T Consensus 145 ~~~~v~V~~iD~~t 158 (368)
T 1mda_H 145 SSAAAGLSVPGASD 158 (368)
T ss_dssp SSCEEEEEETTTEE
T ss_pred CCCeEEEEEEchhh
Confidence 467888 88754
No 231
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.01 E-value=0.0021 Score=60.52 Aligned_cols=254 Identities=8% Similarity=0.003 Sum_probs=130.1
Q ss_pred EEEEcc-CCCEEEEeeCCC-----------cEEEEeecCCCceEEEEecC-cccCeEEEEeeCCCCCCEEEEEeC-CCeE
Q 022111 16 DVAMDF-YGKRLATASSDS-----------SIKIIGLSNSASQHLATLKG-HRGPVWQVAWAHPKFGSILASCSY-DGQV 81 (302)
Q Consensus 16 ~~~~s~-~~~~l~s~~~d~-----------~v~lw~~~~~~~~~~~~~~~-h~~~v~~v~~~~~~~~~~l~s~s~-D~~i 81 (302)
.+++.+ +++.++.||.+. .+.+||........+..+.. +.....++++.. ++++++.|+. +..+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~--~g~lyv~GG~~~~~v 267 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDG--NGQIVVTGGNDAKKT 267 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECT--TSCEEEECSSSTTCE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCC--CCCEEEeCCCCCCce
Confidence 345566 888888888653 57888886655444444422 333333455544 3788888884 5689
Q ss_pred EEEEcCCCCceeEEEEecCCCCCe-eEEEecCCCCCcEEEEEe-cC-----CcEEEEEecCCCCeeeeeecccCCCCeEE
Q 022111 82 IIWKEGNQNDWTQAHTFNDHKSSV-NSIAWAPHELGLSLACGS-SD-----GNISVFTATADGGWDTTRIDQAHPVGVTS 154 (302)
Q Consensus 82 ~iwd~~~~~~~~~~~~~~~h~~~i-~~l~~~pd~~~~~l~sg~-~d-----~~v~~~~~~~~~~~~~~~~~~~h~~~v~~ 154 (302)
.+||..+. .|..+..+. ..+- -+++..++ +++++.|+ .+ ..+.+||..+. .|..... ....+...
T Consensus 268 ~~yd~~t~-~W~~~~~~~--~~R~~~s~~~~~d--g~iyv~GG~~~~~~~~~~~e~yd~~t~-~W~~~~~--~~~~p~~~ 339 (656)
T 1k3i_A 268 SLYDSSSD-SWIPGPDMQ--VARGYQSSATMSD--GRVFTIGGSWSGGVFEKNGEVYSPSSK-TWTSLPN--AKVNPMLT 339 (656)
T ss_dssp EEEEGGGT-EEEECCCCS--SCCSSCEEEECTT--SCEEEECCCCCSSSCCCCEEEEETTTT-EEEEETT--SCSGGGCC
T ss_pred EEecCcCC-ceeECCCCC--ccccccceEEecC--CeEEEEeCcccCCcccccceEeCCCCC-cceeCCC--cccccccc
Confidence 99998764 455443222 2222 23444455 66788887 34 56888887532 3432210 00000000
Q ss_pred EEeCCCCCCCceeecccCCCceeEEEeeCC---------CcEEEEEEecCcccccccccccc------CCCceeEEEeeC
Q 022111 155 VSWAPAMAPGALVGLGLLDPVQKLASCGCD---------NTVKVWKMYNGIWKMDCFPALQM------HSDWVRSVAWAP 219 (302)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D---------~~v~iwd~~~~~~~~~~~~~~~~------h~~~v~~v~~~p 219 (302)
... .. ....++..++.++.+ ..+..||..+..|.... ..... ....-.++.|.+
T Consensus 340 -----~~~-~~----~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~-~~~~~~~~~~~~~~~~~av~~~~ 408 (656)
T 1k3i_A 340 -----ADK-QG----LYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSA-GKRQSNRGVAPDAMCGNAVMYDA 408 (656)
T ss_dssp -----CCT-TG----GGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEE-EECEETTEECCCCBTCEEEEEET
T ss_pred -----ccc-cc----eeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecC-CccccccccCCCCCCCceEeccC
Confidence 000 00 000112333444333 45678887765432111 00000 011124455543
Q ss_pred CCCCCccEEEEEecCC-----------eEEEEEeccCCcceeeeeeccC-CCcE-EEEEEccCCCEEEEecC--------
Q 022111 220 NLGLPKSTIASASQDG-----------TVVIWTCAKEGEQWEGRVLKDF-KTPV-WSVSWSLTGNLLAVADA-------- 278 (302)
Q Consensus 220 ~~~~~~~~l~s~s~D~-----------~i~iwd~~~~~~~~~~~~~~~~-~~~v-~~~~~spdg~~la~~~~-------- 278 (302)
.. +..++.|+.++ .|.+||.... .|........ .... .++...|+|+++++|+.
T Consensus 409 ~~---~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~ 483 (656)
T 1k3i_A 409 VK---GKILTFGGSPDYQDSDATTNAHIITLGEPGTS--PNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFED 483 (656)
T ss_dssp TT---TEEEEECCBSSSSSSBCCCCEEEEECCSTTSC--CEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCC
T ss_pred CC---CeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC--CeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCC
Confidence 21 47788887543 5777776543 3432110111 1112 24456689999999873
Q ss_pred ----CceEEeeecCCceEEEee
Q 022111 279 ----NNVTLWKEAVDGEWQQVS 296 (302)
Q Consensus 279 ----d~i~~w~~~~~~~~~~~~ 296 (302)
+.+.+||.. .++|..+.
T Consensus 484 ~~~~~~v~~ydp~-t~~W~~~~ 504 (656)
T 1k3i_A 484 STPVFTPEIYVPE-QDTFYKQN 504 (656)
T ss_dssp CSBCCCCEEEEGG-GTEEEECC
T ss_pred CCcccceEEEcCC-CCceeecC
Confidence 247899975 46898765
No 232
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.94 E-value=0.0017 Score=59.72 Aligned_cols=248 Identities=10% Similarity=0.047 Sum_probs=126.3
Q ss_pred CCCEEEEeeCC-CcEEEEeecCCCceEEEEecCcccCeEEEEeeC-CCCCCEEEEEe------------------CCCeE
Q 022111 22 YGKRLATASSD-SSIKIIGLSNSASQHLATLKGHRGPVWQVAWAH-PKFGSILASCS------------------YDGQV 81 (302)
Q Consensus 22 ~~~~l~s~~~d-~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~~~l~s~s------------------~D~~i 81 (302)
||++|..+..+ ..|.+.|+.......+..+.. ......+++.. | ++++++.++ .++.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~-g~~phg~~~~~~p-~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPN-AKGIHGLRPQKWP-RSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSS-CCSEEEEEECCSS-BCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCC-CCCCcceeeeecC-CCcEEEEecccccccCCCCcccccccccCceE
Confidence 78888776654 568888886533222224432 22466777743 3 367776663 34578
Q ss_pred EEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCC---------------cEEEEEecC------CCCee
Q 022111 82 IIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDG---------------NISVFTATA------DGGWD 140 (302)
Q Consensus 82 ~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~---------------~v~~~~~~~------~~~~~ 140 (302)
.+.|..+.. ...++.--. ...-++++|+ |.++.+.+.+. .|.+.+... .+...
T Consensus 178 tvID~~t~~---v~~qI~Vgg-~pd~~~~spd--Gk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~ 251 (595)
T 1fwx_A 178 TAVDADKWE---VAWQVLVSG-NLDNCDADYE--GKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ 251 (595)
T ss_dssp EEEETTTTE---EEEEEEESS-CCCCEEECSS--SSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred EEEECCCCe---EEEEEEeCC-CccceEECCC--CCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCee
Confidence 888876642 333332111 3466778887 66666666443 244443211 00000
Q ss_pred ----eeeecccC--CCC-eEEEEeCCCCCCCceeecccCCCcee-EEEeeCCCcEEEEEEecCccc----c----ccccc
Q 022111 141 ----TTRIDQAH--PVG-VTSVSWAPAMAPGALVGLGLLDPVQK-LASCGCDNTVKVWKMYNGIWK----M----DCFPA 204 (302)
Q Consensus 141 ----~~~~~~~h--~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~-l~s~~~D~~v~iwd~~~~~~~----~----~~~~~ 204 (302)
...+.... ... +..+... ..-+++..+++|++ ++++..+.+|.++|+.+.... + .....
T Consensus 252 ~i~~V~VID~~~~~~~~~~~~Ipvg-----~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~ 326 (595)
T 1fwx_A 252 ELNGVKVVDGRKEASSLFTRYIPIA-----NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAE 326 (595)
T ss_dssp EETTEEEEECSGGGCCSSEEEEEEE-----SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEEC
T ss_pred EECcEEEEeCcccCCceeEEEEecC-----CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEE
Confidence 00000000 000 0111000 01112233444554 555667899999998753100 0 01111
Q ss_pred cccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCC--------cceeeeeeccCC-CcE---EEEEEccCCCE
Q 022111 205 LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEG--------EQWEGRVLKDFK-TPV---WSVSWSLTGNL 272 (302)
Q Consensus 205 ~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~--------~~~~~~~~~~~~-~~v---~~~~~spdg~~ 272 (302)
.. -...-..++|+|++ ...++.-.|+.|.+||+.... .+....+-..+. +.. .++.++|||++
T Consensus 327 v~-vG~gP~h~aF~~dG----~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~ 401 (595)
T 1fwx_A 327 PE-LGLGPLHTAFDGRG----NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDW 401 (595)
T ss_dssp CB-CCSCEEEEEECTTS----EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSE
T ss_pred cC-CCCCcceEEECCCC----eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCE
Confidence 11 12346789999985 556677789999999987510 111111111111 101 12356899999
Q ss_pred EEEecC---Cce-----------EEeeec
Q 022111 273 LAVADA---NNV-----------TLWKEA 287 (302)
Q Consensus 273 la~~~~---d~i-----------~~w~~~ 287 (302)
|.++.. |.+ .|+|+.
T Consensus 402 l~~~Nk~skdr~~~~gp~~~~~~ql~dis 430 (595)
T 1fwx_A 402 LVCLSKFSKDRFLNVGPLKPENDQLIDIS 430 (595)
T ss_dssp EEEEESCCTTSSCCCCSSCCEEEEEEECS
T ss_pred EEEcCCCCccccccCCCCCCCcceEEEcC
Confidence 988844 456 888884
No 233
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.92 E-value=0.01 Score=56.71 Aligned_cols=118 Identities=14% Similarity=0.131 Sum_probs=66.0
Q ss_pred cccc-ceeEEEEc-cCCCEEEEee-CC----CcEEEEeecCC-CceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCC--
Q 022111 9 GHED-TVHDVAMD-FYGKRLATAS-SD----SSIKIIGLSNS-ASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYD-- 78 (302)
Q Consensus 9 ~h~~-~v~~~~~s-~~~~~l~s~~-~d----~~v~lw~~~~~-~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D-- 78 (302)
+|.- .+...+|| |||++||-+. .+ .+|+++|+.++ .. ....+. .....++|+++ |+.|+....|
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~-l~~~~~---~~~~~~~WspD--g~~l~y~~~d~~ 243 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT-IADKVS---GTNGEIVWGPD--HTSLFYVTKDET 243 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC-CCCCEE---EECSCCEECSS--TTEEEEEEECTT
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe-CCcccc---CceeeEEEecC--CCEEEEEEECCC
Confidence 3443 67788999 9999887332 22 35899998764 31 001111 11346789864 6766666665
Q ss_pred ---CeEEEEEcCCCCceeEEEEec-CCCCCeeEEEecCCCCCcEEEEEec---CCcEEEEEecC
Q 022111 79 ---GQVIIWKEGNQNDWTQAHTFN-DHKSSVNSIAWAPHELGLSLACGSS---DGNISVFTATA 135 (302)
Q Consensus 79 ---~~i~iwd~~~~~~~~~~~~~~-~h~~~i~~l~~~pd~~~~~l~sg~~---d~~v~~~~~~~ 135 (302)
..|.++++.+... .....+. ........+.|+|| |.+|+..+. ...|.++|+..
T Consensus 244 ~~~~~v~~~~lgt~~~-~~~lv~~~~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 244 LRENKVWRHVMGKLQS-EDVCLYEEHNPLFSAFMYKAAD--TNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp CCEEEEEEEETTSCGG-GCEEEEECCCTTCEEEEEECTT--SSEEEEEEECSSCEEEEEEESSS
T ss_pred CCCCEEEEEECCCCch-hcEEEEecCCCceEEEEEECCC--CCEEEEEecCCCCceEEEEECCC
Confidence 2566677755321 1111222 12345667899998 556555442 23555666653
No 234
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.85 E-value=0.0028 Score=60.09 Aligned_cols=54 Identities=22% Similarity=0.348 Sum_probs=36.5
Q ss_pred CCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCce
Q 022111 234 DGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGE 291 (302)
Q Consensus 234 D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~ 291 (302)
++.|+.||+.+.+..|.... ..+.++..++..|.+|.+++.| .++.||....+.
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~----~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPY----VTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEK 508 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEE----SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ceeEEEEECCCCCeEeEccC----CCCccCccceECCCEEEEECCCCcEEEEECCCCcc
Confidence 47799999887655554322 2334445666777888888777 699999765444
No 235
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.83 E-value=0.011 Score=50.38 Aligned_cols=237 Identities=10% Similarity=0.124 Sum_probs=117.5
Q ss_pred ccceeEEEEccCCCEEEEeeCCCcEEEEeecC-CCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeE-EEEEcCC
Q 022111 11 EDTVHDVAMDFYGKRLATASSDSSIKIIGLSN-SASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQV-IIWKEGN 88 (302)
Q Consensus 11 ~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~-~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i-~iwd~~~ 88 (302)
...+.++.|++ ++.++ ++..+.|..- .+. .+.+.+.....+.+.+..|.+.++ +.+++.+ .++.+ +-.| .
T Consensus 79 ~~~~~~i~~~~-~~~~~-~g~~g~i~~S-~DgG~tW~~~~~~~~~~~~~~~i~~~~~--~~~~~~~-~~g~v~~S~D--g 150 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWI-VGEPPIMLHT-TDGGQSWSQIPLDPKLPGSPRLIKALGN--GSAEMIT-NVGAIYRTKD--S 150 (327)
T ss_dssp CCEEEEEEEET-TEEEE-EEETTEEEEE-SSTTSSCEECCCCTTCSSCEEEEEEEET--TEEEEEE-TTCCEEEESS--T
T ss_pred CccEEEEEecC-CeEEE-EECCCeEEEE-CCCCCCceECccccCCCCCeEEEEEECC--CCEEEEe-CCccEEEEcC--C
Confidence 34678888875 44444 5566655442 221 222322211123445777877543 5555554 45543 3222 3
Q ss_pred CCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceee
Q 022111 89 QNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVG 168 (302)
Q Consensus 89 ~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 168 (302)
+..|.... ..+...+..+.+.|+ +..++.+ ..+.+..-+-.....|.... ......+..+.+.++
T Consensus 151 G~tW~~~~--~~~~~~~~~~~~~~~--~~~~~~g-~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~-------- 215 (327)
T 2xbg_A 151 GKNWQALV--QEAIGVMRNLNRSPS--GEYVAVS-SRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPD-------- 215 (327)
T ss_dssp TSSEEEEE--CSCCCCEEEEEECTT--SCEEEEE-TTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTT--------
T ss_pred CCCCEEee--cCCCcceEEEEEcCC--CcEEEEE-CCCcEEEEeCCCCCceeECC--CCCCCccceeEECCC--------
Confidence 45565543 245567889999886 5556555 44544332110023454332 233445666766553
Q ss_pred cccCCCceeEEEeeCCCcEEEEEEecC-ccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCc
Q 022111 169 LGLLDPVQKLASCGCDNTVKVWKMYNG-IWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGE 247 (302)
Q Consensus 169 ~~~~~~~~~l~s~~~D~~v~iwd~~~~-~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~ 247 (302)
+ .+..++.++.+++.+...+ .|.......+ .+...+.++.+.|++ ..+++ +.++.|. --.....
T Consensus 216 ------g-~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~-~~~~~~~~v~~~~~~----~~~~~-g~~g~i~--~S~DgG~ 280 (327)
T 2xbg_A 216 ------G-RLWMIVNGGKIAFSDPDNSENWGELLSPLR-RNSVGFLDLAYRTPN----EVWLA-GGAGALL--CSQDGGQ 280 (327)
T ss_dssp ------S-CEEEEETTTEEEEEETTEEEEECCCBCTTS-SCCSCEEEEEESSSS----CEEEE-ESTTCEE--EESSTTS
T ss_pred ------C-CEEEEeCCceEEEecCCCCCeeEeccCCcc-cCCcceEEEEecCCC----EEEEE-eCCCeEE--EeCCCCc
Confidence 2 3445556777776531111 1221100001 122358899998763 44444 4567662 2223334
Q ss_pred ceeeeee-ccCCCcEEEEEEccCCCEEEEecCCceEEee
Q 022111 248 QWEGRVL-KDFKTPVWSVSWSLTGNLLAVADANNVTLWK 285 (302)
Q Consensus 248 ~~~~~~~-~~~~~~v~~~~~spdg~~la~~~~d~i~~w~ 285 (302)
.|..... ......++++.|.+++++++++.+..|..++
T Consensus 281 tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 281 TWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYV 319 (327)
T ss_dssp SCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEEC
T ss_pred ccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEc
Confidence 4542211 1223567889998777666666433555444
No 236
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.78 E-value=0.0035 Score=59.37 Aligned_cols=80 Identities=13% Similarity=0.232 Sum_probs=47.0
Q ss_pred CCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEE
Q 022111 184 DNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWS 263 (302)
Q Consensus 184 D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 263 (302)
++.|+.||+.+++..-. +..+. .+..-.+... +..++.++.|+.|+.||.++.+..|...+..+ ....-
T Consensus 454 ~g~l~A~D~~tG~~~W~----~~~~~-~~~~g~~~ta----gglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~--~~~~p 522 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWE----VPYVT-IFNGGTLSTA----GNLVFEGSADGRVIAYAADTGEKLWEQPAASG--VMAAP 522 (689)
T ss_dssp EEEEEEEETTTTEEEEE----EEESS-SCCCCEEEET----TTEEEEECTTSEEEEEETTTCCEEEEEECSSC--CCSCC
T ss_pred ceeEEEEECCCCCeEeE----ccCCC-CccCccceEC----CCEEEEECCCCcEEEEECCCCccceeeeCCCC--cccCc
Confidence 47799999987742111 11111 1222234444 36788899999999999987665554333221 11233
Q ss_pred EEEccCCCEEE
Q 022111 264 VSWSLTGNLLA 274 (302)
Q Consensus 264 ~~~spdg~~la 274 (302)
+.|+.+|++++
T Consensus 523 ~ty~~~G~qyv 533 (689)
T 1yiq_A 523 VTYSVDGEQYV 533 (689)
T ss_dssp EEEEETTEEEE
T ss_pred eEEEECCEEEE
Confidence 67788997553
No 237
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.75 E-value=0.0038 Score=52.67 Aligned_cols=215 Identities=13% Similarity=0.043 Sum_probs=113.3
Q ss_pred CCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCC
Q 022111 23 GKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHK 102 (302)
Q Consensus 23 ~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~ 102 (302)
+..+..++.++.+..++.. +. .......+...+.++...+ ++. |..++.++.+..+|.. +. ....+....
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~--~~~~~~~~~~~~~~~~~~~--~g~-l~vgt~~~~l~~~d~~-g~---~~~~~~~~~ 176 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GT--EKWRFKTKKAIYATPIVSE--DGT-IYVGSNDNYLYAINPD-GT---EKWRFKTND 176 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SC--EEEEEECSSCCCSCCEECT--TSC-EEEECTTSEEEEECTT-SC---EEEEEECSS
T ss_pred CCEEEEEecCCEEEEEcCC-CC--EEEEEcCCCceeeeeEEcC--CCE-EEEEcCCCEEEEECCC-CC---EeEEEecCC
Confidence 4456667788888888865 22 2333333444455555532 244 5567788999999876 32 233333344
Q ss_pred CCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEee
Q 022111 103 SSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCG 182 (302)
Q Consensus 103 ~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~ 182 (302)
..+.++...++ +. +..++ +.+..++ .+ +. ...... .....+.++...+ ...|..++
T Consensus 177 ~~~~~~~~d~~--g~-l~v~t--~~l~~~d-~~-g~-~~~~~~-~~~~~~~~~~~~~---------------~g~l~v~t 232 (330)
T 3hxj_A 177 AITSAASIGKD--GT-IYFGS--DKVYAIN-PD-GT-EKWNFY-AGYWTVTRPAISE---------------DGTIYVTS 232 (330)
T ss_dssp CCCSCCEECTT--CC-EEEES--SSEEEEC-TT-SC-EEEEEC-CSSCCCSCCEECT---------------TSCEEEEE
T ss_pred CceeeeEEcCC--CE-EEEEe--CEEEEEC-CC-Cc-EEEEEc-cCCcceeceEECC---------------CCeEEEEc
Confidence 55666666554 44 44444 7787887 32 22 112221 1112233333332 23566677
Q ss_pred CCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEE
Q 022111 183 CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVW 262 (302)
Q Consensus 183 ~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~ 262 (302)
.++.+..+|.. +. .+..+......+.++...++ ..|..++.++.|..+|. +....+... .....+.
T Consensus 233 ~~~gl~~~~~~-g~----~~~~~~~~~~~~~~~~~~~~-----g~l~v~t~~ggl~~~d~-~g~~~~~~~---~~~~~~~ 298 (330)
T 3hxj_A 233 LDGHLYAINPD-GT----EKWRFKTGKRIESSPVIGNT-----DTIYFGSYDGHLYAINP-DGTEKWNFE---TGSWIIA 298 (330)
T ss_dssp TTTEEEEECTT-SC----EEEEEECSSCCCSCCEECTT-----SCEEEECTTCEEEEECT-TSCEEEEEE---CSSCCCS
T ss_pred CCCeEEEECCC-CC----EeEEeeCCCCccccceEcCC-----CeEEEecCCCCEEEECC-CCcEEEEEE---cCCcccc
Confidence 77778887642 21 11111112222334444444 35778888888999985 222222211 1123456
Q ss_pred EEEEccCCCEEEEecCC-ceEEeee
Q 022111 263 SVSWSLTGNLLAVADAN-NVTLWKE 286 (302)
Q Consensus 263 ~~~~spdg~~la~~~~d-~i~~w~~ 286 (302)
++...++|++.+.+ .+ .+++...
T Consensus 299 ~~~~d~~g~l~~gt-~~G~~~~~~~ 322 (330)
T 3hxj_A 299 TPVIDENGTIYFGT-RNGKFYALFN 322 (330)
T ss_dssp CCEECTTCCEEEEC-TTSCEEEEEC
T ss_pred ceEEcCCCEEEEEc-CCCeEEEEec
Confidence 67777888776544 55 5666654
No 238
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.74 E-value=0.0044 Score=58.32 Aligned_cols=235 Identities=10% Similarity=0.050 Sum_probs=114.7
Q ss_pred EEEEccCCCEEEEeeC-CCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEe-CC-----CeEEEEEcCC
Q 022111 16 DVAMDFYGKRLATASS-DSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCS-YD-----GQVIIWKEGN 88 (302)
Q Consensus 16 ~~~~s~~~~~l~s~~~-d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s-~D-----~~i~iwd~~~ 88 (302)
++++..+++.++.||. +..+.+||........+..+...... .+++..+ ++++++.|+ .+ ..+.+||..+
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~-~s~~~~~--dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGY-QSSATMS--DGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSS-CEEEECT--TSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccc-cceEEec--CCeEEEEeCcccCCcccccceEeCCCC
Confidence 4567788999999984 46899999865544433333221111 1233332 378888888 44 5689999865
Q ss_pred CCceeEEEEe---cCCCCCeeEEEecCCCCCcEEEEEecC---------CcEEEEEecCCCCeeeeeeccc------CCC
Q 022111 89 QNDWTQAHTF---NDHKSSVNSIAWAPHELGLSLACGSSD---------GNISVFTATADGGWDTTRIDQA------HPV 150 (302)
Q Consensus 89 ~~~~~~~~~~---~~h~~~i~~l~~~pd~~~~~l~sg~~d---------~~v~~~~~~~~~~~~~~~~~~~------h~~ 150 (302)
. .|..+... ...... ....+..+ +..++.|+.+ ..+..||.....-+........ ...
T Consensus 324 ~-~W~~~~~~~~~p~~~~~-~~~~~~~~--~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~ 399 (656)
T 1k3i_A 324 K-TWTSLPNAKVNPMLTAD-KQGLYRSD--NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAM 399 (656)
T ss_dssp T-EEEEETTSCSGGGCCCC-TTGGGTTT--CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCB
T ss_pred C-cceeCCCcccccccccc-ccceeecC--CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCC
Confidence 3 45433100 000000 00011122 2334444433 3556777654321211110000 000
Q ss_pred CeEEEEeCCCCCCCceeecccCCCceeEEEeeCCC-----------cEEEEEEecCccccccccccccCCCce-eEEEee
Q 022111 151 GVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDN-----------TVKVWKMYNGIWKMDCFPALQMHSDWV-RSVAWA 218 (302)
Q Consensus 151 ~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~-----------~v~iwd~~~~~~~~~~~~~~~~h~~~v-~~v~~~ 218 (302)
.-.++.+.. .+++.++.||.++ .+.+||..+..|...... ....... .+....
T Consensus 400 ~~~av~~~~-------------~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~--~mp~~R~~~~~~~l 464 (656)
T 1k3i_A 400 CGNAVMYDA-------------VKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASN--GLYFARTFHTSVVL 464 (656)
T ss_dssp TCEEEEEET-------------TTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTT--CCSSCCBSCEEEEC
T ss_pred CCceEeccC-------------CCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccC--CCCCCcccCCeEEC
Confidence 112222211 1246777777543 577787766555421100 1111111 233445
Q ss_pred CCCCCCccEEEEEecC-----------CeEEEEEeccCCcceeeee-eccCCCcEEEEEEccCCCEEEEecC
Q 022111 219 PNLGLPKSTIASASQD-----------GTVVIWTCAKEGEQWEGRV-LKDFKTPVWSVSWSLTGNLLAVADA 278 (302)
Q Consensus 219 p~~~~~~~~l~s~s~D-----------~~i~iwd~~~~~~~~~~~~-~~~~~~~v~~~~~spdg~~la~~~~ 278 (302)
|++ +.++.|+.+ ..+.+||.... .|.... +...........+.|||++++.|+.
T Consensus 465 ~~g----~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~--~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 465 PDG----STFITGGQRRGIPFEDSTPVFTPEIYVPEQD--TFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp TTS----CEEEECCBSBCCTTCCCSBCCCCEEEEGGGT--EEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCC----CEEEECCcccCcCcCCCCcccceEEEcCCCC--ceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 664 678888764 46899998753 343211 0011111223456799999999875
No 239
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.73 E-value=0.016 Score=49.11 Aligned_cols=241 Identities=8% Similarity=-0.016 Sum_probs=119.8
Q ss_pred ceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEec-----------------CcccCeEEEEeeCCCCCCEEEEE
Q 022111 13 TVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLK-----------------GHRGPVWQVAWAHPKFGSILASC 75 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~-----------------~h~~~v~~v~~~~~~~~~~l~s~ 75 (302)
...+++++++++++.++..++.|..|+........+.... ........+++.+. ++++++ +
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~-~g~l~v-~ 97 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQ-NNQLYI-V 97 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETT-TTEEEE-E
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCC-CCcEEE-E
Confidence 3556788999987778888899999887543222211100 01234678888642 255544 4
Q ss_pred eCCCeEEEEEcCCCCceeEEE-EecC-CCCCeeEEEecC-CCCCcEEEEEec-----------------CCcEEEEEecC
Q 022111 76 SYDGQVIIWKEGNQNDWTQAH-TFND-HKSSVNSIAWAP-HELGLSLACGSS-----------------DGNISVFTATA 135 (302)
Q Consensus 76 s~D~~i~iwd~~~~~~~~~~~-~~~~-h~~~i~~l~~~p-d~~~~~l~sg~~-----------------d~~v~~~~~~~ 135 (302)
...+.+..+|..++. .+.+. ...+ .......+++.| + |.+.++-.. ++.|..|+...
T Consensus 98 d~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~--G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRT--GIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp ETTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTT--CCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred ECCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCC--CEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 444557777765321 11111 1111 123467888888 6 444443221 24455555422
Q ss_pred CCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcc-ccccccccccCCCceeE
Q 022111 136 DGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIW-KMDCFPALQMHSDWVRS 214 (302)
Q Consensus 136 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~-~~~~~~~~~~h~~~v~~ 214 (302)
. ..... .. .......++++|++ ..++++-...+.|.+|++..... ....+..+ .+ ...
T Consensus 175 ~-~~~~~-~~--~~~~p~gia~~~dg-------------~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~---~g-P~g 233 (322)
T 2fp8_A 175 K-ETTLL-LK--ELHVPGGAEVSADS-------------SFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI---PN-PGN 233 (322)
T ss_dssp T-EEEEE-EE--EESCCCEEEECTTS-------------SEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC---SS-EEE
T ss_pred C-EEEEe-cc--CCccCcceEECCCC-------------CEEEEEeCCCCeEEEEECCCCcCCccceEEeC---CC-CCC
Confidence 1 11111 00 01123456676643 12455556678899999864311 11111111 22 567
Q ss_pred EEeeCCCCCCccEEEEEec----------CCeEEEEEeccCCcceeeeeeccC---CCcEEEEEEccCCCEEEEecCC-c
Q 022111 215 VAWAPNLGLPKSTIASASQ----------DGTVVIWTCAKEGEQWEGRVLKDF---KTPVWSVSWSLTGNLLAVADAN-N 280 (302)
Q Consensus 215 v~~~p~~~~~~~~l~s~s~----------D~~i~iwd~~~~~~~~~~~~~~~~---~~~v~~~~~spdg~~la~~~~d-~ 280 (302)
+++.+++ +..++... .+.|..+|... .. ...+.... -..+.++++ .+|+++++...+ .
T Consensus 234 i~~d~~G----~l~va~~~~~~~~~~~~~~~~v~~~d~~G--~~-~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~ 305 (322)
T 2fp8_A 234 IKRNADG----HFWVSSSEELDGNMHGRVDPKGIKFDEFG--NI-LEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGS 305 (322)
T ss_dssp EEECTTS----CEEEEEEEETTSSTTSCEEEEEEEECTTS--CE-EEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSE
T ss_pred eEECCCC----CEEEEecCcccccccCCCccEEEEECCCC--CE-EEEEECCCCCccccceEEEE-eCCEEEEeecCCCc
Confidence 8888875 45555443 34566666432 11 11111111 123566666 455555444333 6
Q ss_pred eEEeeec
Q 022111 281 VTLWKEA 287 (302)
Q Consensus 281 i~~w~~~ 287 (302)
|..++.+
T Consensus 306 i~~~~~~ 312 (322)
T 2fp8_A 306 VGILVYD 312 (322)
T ss_dssp EEEEEC-
T ss_pred eEEEecc
Confidence 8888764
No 240
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.72 E-value=0.017 Score=49.19 Aligned_cols=247 Identities=11% Similarity=0.128 Sum_probs=126.2
Q ss_pred ccceeEEEEccCCCEEEEeeCCCcEEEEeecCC-CceEEEE-ecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCC
Q 022111 11 EDTVHDVAMDFYGKRLATASSDSSIKIIGLSNS-ASQHLAT-LKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGN 88 (302)
Q Consensus 11 ~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~-~~~~~~~-~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~ 88 (302)
...+.++.|..++..++ ++..+.|... .+.+ +.+.+.. .......+.+|.|.+ +..++ ++.++.|.. ....
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i~~s-~DgG~tW~~~~~~~~~~~~~~~~i~~~~---~~~~~-~g~~g~i~~-S~Dg 107 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATLMET-RDGGQTWEPRTLVLDHSDYRFNSVSFQG---NEGWI-VGEPPIMLH-TTDG 107 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEEEEE-SSTTSSCEECCCCCSCCCCEEEEEEEET---TEEEE-EEETTEEEE-ESST
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeEEEe-CCCCCCCeECCCCCCCCCccEEEEEecC---CeEEE-EECCCeEEE-ECCC
Confidence 34688898887777777 5567765332 2222 2232211 112234578888863 34444 456665433 2223
Q ss_pred CCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecC-CCCeeeeeecccCCCCeEEEEeCCCCCCCcee
Q 022111 89 QNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA-DGGWDTTRIDQAHPVGVTSVSWAPAMAPGALV 167 (302)
Q Consensus 89 ~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 167 (302)
+..|+.......+.+.+..+.+.++ +..++.+ .++.| |.... ...|.... ......+..+.+.|+
T Consensus 108 G~tW~~~~~~~~~~~~~~~i~~~~~--~~~~~~~-~~g~v--~~S~DgG~tW~~~~--~~~~~~~~~~~~~~~------- 173 (327)
T 2xbg_A 108 GQSWSQIPLDPKLPGSPRLIKALGN--GSAEMIT-NVGAI--YRTKDSGKNWQALV--QEAIGVMRNLNRSPS------- 173 (327)
T ss_dssp TSSCEECCCCTTCSSCEEEEEEEET--TEEEEEE-TTCCE--EEESSTTSSEEEEE--CSCCCCEEEEEECTT-------
T ss_pred CCCceECccccCCCCCeEEEEEECC--CCEEEEe-CCccE--EEEcCCCCCCEEee--cCCCcceEEEEEcCC-------
Confidence 4556554322223345677777654 4445544 45544 33332 23455432 233445677777653
Q ss_pred ecccCCCceeEEEeeCCCcEEE-EEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCC
Q 022111 168 GLGLLDPVQKLASCGCDNTVKV-WKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEG 246 (302)
Q Consensus 168 ~~~~~~~~~~l~s~~~D~~v~i-wd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~ 246 (302)
+..++.+ .++.+.. .|-....|.. +. ......+..+.+.|++ . +..++.+|.+++.+.+ ..
T Consensus 174 -------~~~~~~g-~~G~~~~S~d~gG~tW~~--~~--~~~~~~~~~~~~~~~g----~-~~~~~~~G~~~~s~~D-~G 235 (327)
T 2xbg_A 174 -------GEYVAVS-SRGSFYSTWEPGQTAWEP--HN--RTTSRRLHNMGFTPDG----R-LWMIVNGGKIAFSDPD-NS 235 (327)
T ss_dssp -------SCEEEEE-TTSSEEEEECTTCSSCEE--EE--CCSSSCEEEEEECTTS----C-EEEEETTTEEEEEETT-EE
T ss_pred -------CcEEEEE-CCCcEEEEeCCCCCceeE--CC--CCCCCccceeEECCCC----C-EEEEeCCceEEEecCC-CC
Confidence 2445444 4444433 2211122221 11 2345568889998874 3 4455677887776311 12
Q ss_pred cceeeeeec--cCCCcEEEEEEccCCCEEEEecCCceEEeeecCCceEEEeee
Q 022111 247 EQWEGRVLK--DFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVDGEWQQVSV 297 (302)
Q Consensus 247 ~~~~~~~~~--~~~~~v~~~~~spdg~~la~~~~d~i~~w~~~~~~~~~~~~~ 297 (302)
..|...... .....+.+++|.|++++++++....+ ++.......|.+...
T Consensus 236 ~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~ 287 (327)
T 2xbg_A 236 ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVD 287 (327)
T ss_dssp EEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGG
T ss_pred CeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCc
Confidence 234321111 11235889999998888888764445 333333345887654
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.68 E-value=0.004 Score=51.20 Aligned_cols=186 Identities=11% Similarity=0.110 Sum_probs=101.1
Q ss_pred eeEEEEccCCCEEEEeeCCC--cEEEEeecCCCceEEEEecCcccC-eEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCC
Q 022111 14 VHDVAMDFYGKRLATASSDS--SIKIIGLSNSASQHLATLKGHRGP-VWQVAWAHPKFGSILASCSYDGQVIIWKEGNQN 90 (302)
Q Consensus 14 v~~~~~s~~~~~l~s~~~d~--~v~lw~~~~~~~~~~~~~~~h~~~-v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~ 90 (302)
...+.|+ ++....+.|.++ .|+.+|+.+.. .+..+.-.... --.+.+.. +++.+..-.++.+.++|.++..
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgk--v~~~~~l~~~~FgeGit~~g---~~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGK--TLQQIELGKRYFGEGISDWK---DKIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCC--EEEEEECCTTCCEEEEEEET---TEEEEEESSSSEEEEEETTTCC
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCc--EEEEEecCCccceeEEEEeC---CEEEEEEeeCCEEEEEECccCc
Confidence 3568888 677777888876 89999986643 34443322211 12355532 3455555568999999987764
Q ss_pred ceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeec-ccCC-CCeEEEEeCCCCCCCceee
Q 022111 91 DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRID-QAHP-VGVTSVSWAPAMAPGALVG 168 (302)
Q Consensus 91 ~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~-~~h~-~~v~~~~~~~~~~~~~~~~ 168 (302)
.+.++... . ....+++| +..|.....++.|.++|..+.......... .+.+ ..++.+.|.
T Consensus 119 ---~~~ti~~~-~--eG~glt~d--g~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~---------- 180 (262)
T 3nol_A 119 ---QVRSFNYD-G--EGWGLTHN--DQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV---------- 180 (262)
T ss_dssp ---EEEEEECS-S--CCCCEEEC--SSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE----------
T ss_pred ---EEEEEECC-C--CceEEecC--CCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE----------
Confidence 44455422 1 22233345 345555555778888876543222111111 0111 123345553
Q ss_pred cccCCCceeEEEeeCCCcEEEEEEecCcccccc-ccccc-------cCCCceeEEEeeCCCCCCccEEEEE
Q 022111 169 LGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDC-FPALQ-------MHSDWVRSVAWAPNLGLPKSTIASA 231 (302)
Q Consensus 169 ~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~-~~~~~-------~h~~~v~~v~~~p~~~~~~~~l~s~ 231 (302)
++..++..-.++.|.+.|..++...... ...+. .-.+.-+.|+|+|+. ...+++|
T Consensus 181 -----~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~---~~lfVTG 243 (262)
T 3nol_A 181 -----DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEH---HRLFVTG 243 (262)
T ss_dssp -----TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTT---TEEEEEE
T ss_pred -----CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCC---CEEEEEC
Confidence 2456666666788888888776321000 00011 112346889999985 3566666
No 242
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.65 E-value=0.0056 Score=58.59 Aligned_cols=158 Identities=11% Similarity=0.044 Sum_probs=78.9
Q ss_pred CeEEEEee-CCCCCCEEEEEe-CC----CeEEEEEcCCC-CceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCC---
Q 022111 57 PVWQVAWA-HPKFGSILASCS-YD----GQVIIWKEGNQ-NDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDG--- 126 (302)
Q Consensus 57 ~v~~v~~~-~~~~~~~l~s~s-~D----~~i~iwd~~~~-~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~--- 126 (302)
.+...+|+ |+ |++||-.. .+ .+|.++|+.++ .... ..+. .....++|+|| +..|+....|.
T Consensus 175 ~~~~~~~S~PD--G~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~--~~~~---~~~~~~~WspD--g~~l~y~~~d~~~~ 245 (751)
T 2xe4_A 175 DVMEVKPAPPE--HDLVAFSVDMSGNEVYTIEFKRISDPSQTIA--DKVS---GTNGEIVWGPD--HTSLFYVTKDETLR 245 (751)
T ss_dssp EEEEEEECTTT--TCEEEEEEESSSSSCEEEEEEETTCTTCCCC--CCEE---EECSCCEECSS--TTEEEEEEECTTCC
T ss_pred EEeeeEecCCC--CCEEEEEEeCCCCceEEEEEEECCCCCEeCC--cccc---CceeeEEEecC--CCEEEEEEECCCCC
Confidence 46778998 64 78776443 22 35999998765 3110 1111 11356889998 55666666552
Q ss_pred --cEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEee---CCCcEEEEEEecCcccc--
Q 022111 127 --NISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCG---CDNTVKVWKMYNGIWKM-- 199 (302)
Q Consensus 127 --~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~---~D~~v~iwd~~~~~~~~-- 199 (302)
.|.++++.....................+.|+|++ +.|+..+ ....|.++|+.++....
T Consensus 246 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg--------------~~l~~~~~~~~~~~l~~~d~~~~~~~~~~ 311 (751)
T 2xe4_A 246 ENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADT--------------NTLCIGSQSPETAEVHLLDLRKGNAHNTL 311 (751)
T ss_dssp EEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTS--------------SEEEEEEECSSCEEEEEEESSSCTTCCCE
T ss_pred CCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCC--------------CEEEEEecCCCCceEEEEECCCCCCCcee
Confidence 45555554321111111111222235677888864 4444332 23457778876542111
Q ss_pred ccccccccCCCceeEEEeeCCCCCCccEEEEEecC--CeEEEEEec
Q 022111 200 DCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQD--GTVVIWTCA 243 (302)
Q Consensus 200 ~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D--~~i~iwd~~ 243 (302)
..+ .....+...++.|+.. +..++....+ +..+||.+.
T Consensus 312 ~~l--~~~~~~~~~s~~~~~g----~~l~~~t~~~~a~~~~L~~~d 351 (751)
T 2xe4_A 312 EIV--RPREKGVRYDVQMHGT----SHLVILTNEGGAVNHKLLIAP 351 (751)
T ss_dssp EES--SCCCTTCCEEEEEETT----TEEEEEECTTTCTTCEEEEEE
T ss_pred EEe--ecCCCCceEEEeeeeC----CEEEEEeCCCCCCCcEEEEEc
Confidence 111 1223444566665543 2444444444 444555443
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.64 E-value=0.018 Score=47.21 Aligned_cols=224 Identities=13% Similarity=0.033 Sum_probs=120.9
Q ss_pred ceeEEEEccCCCEEEEee-CCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCc
Q 022111 13 TVHDVAMDFYGKRLATAS-SDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQND 91 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~~-~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~ 91 (302)
.+..+++++++..|..+. ..+.|..++........ .+.........+++.+. .+.++++....+.|.++++.....
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~--~~~~~~~~p~~ia~d~~-~~~lyv~d~~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTT--IIRQDLGSPEGIALDHL-GRTIFWTDSQLDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEE--EECTTCCCEEEEEEETT-TTEEEEEETTTTEEEEEETTSCSC
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEE--EEECCCCCccEEEEEec-CCeEEEEECCCCEEEEEEcCCCCE
Confidence 456788998765555444 56789999876532221 22222235678888753 255666667788999998854321
Q ss_pred eeEEEEecCCCCCeeEEEecCCCCCcEEEEEec--CCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeec
Q 022111 92 WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSS--DGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGL 169 (302)
Q Consensus 92 ~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~--d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 169 (302)
..+ ..........+++.|+. +.+.++... .+.|..++..... .. .+..........++++|++
T Consensus 114 -~~~--~~~~~~~P~~i~vd~~~-g~lyv~~~~~~~~~I~~~~~dg~~-~~--~~~~~~~~~P~gia~d~~~-------- 178 (267)
T 1npe_A 114 -RVL--FDTGLVNPRGIVTDPVR-GNLYWTDWNRDNPKIETSHMDGTN-RR--ILAQDNLGLPNGLTFDAFS-------- 178 (267)
T ss_dssp -EEE--ECSSCSSEEEEEEETTT-TEEEEEECCSSSCEEEEEETTSCC-CE--EEECTTCSCEEEEEEETTT--------
T ss_pred -EEE--EECCCCCccEEEEeeCC-CEEEEEECCCCCcEEEEEecCCCC-cE--EEEECCCCCCcEEEEcCCC--------
Confidence 111 12122456899999863 333333322 3567666653211 11 1111112234667777643
Q ss_pred ccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcce
Q 022111 170 GLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQW 249 (302)
Q Consensus 170 ~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~ 249 (302)
+.++++....+.|.++|+...... .. +.+ ...-..++.. + +..+++....+.|..+|......
T Consensus 179 -----~~lyv~d~~~~~I~~~~~~g~~~~-~~---~~~-~~~P~gi~~d--~---~~lyva~~~~~~v~~~d~~~g~~-- 241 (267)
T 1npe_A 179 -----SQLCWVDAGTHRAECLNPAQPGRR-KV---LEG-LQYPFAVTSY--G---KNLYYTDWKTNSVIAMDLAISKE-- 241 (267)
T ss_dssp -----TEEEEEETTTTEEEEEETTEEEEE-EE---EEC-CCSEEEEEEE--T---TEEEEEETTTTEEEEEETTTTEE--
T ss_pred -----CEEEEEECCCCEEEEEecCCCceE-EE---ecC-CCCceEEEEe--C---CEEEEEECCCCeEEEEeCCCCCc--
Confidence 356677777788999997643111 11 111 1223455543 2 24555555678898888764321
Q ss_pred eeeeeccCCCcEEEEEEccCCC
Q 022111 250 EGRVLKDFKTPVWSVSWSLTGN 271 (302)
Q Consensus 250 ~~~~~~~~~~~v~~~~~spdg~ 271 (302)
...+..+.....+.+++.|++.
T Consensus 242 ~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 242 MDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEECCSSCCCCCCEEEECSCC
T ss_pred eEEEccccccccceeeecCccC
Confidence 1122111112367788888875
No 244
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.63 E-value=0.019 Score=47.16 Aligned_cols=188 Identities=8% Similarity=-0.028 Sum_probs=100.1
Q ss_pred eEEEEeeCCCCCCEEEEEeCCC--eEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecC
Q 022111 58 VWQVAWAHPKFGSILASCSYDG--QVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA 135 (302)
Q Consensus 58 v~~v~~~~~~~~~~l~s~s~D~--~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~ 135 (302)
...+.|+ + +.++.+.+.++ .|+.+|++++.. ..++... .........++. ..+......++.+.+||..+
T Consensus 45 tqGL~~~-~--~~LyestG~~g~S~v~~vD~~Tgkv---~~~~~l~-~~~FgeGit~~g-~~ly~ltw~~~~v~v~D~~t 116 (262)
T 3nol_A 45 TEGFFYR-N--GYFYESTGLNGRSSIRKVDIESGKT---LQQIELG-KRYFGEGISDWK-DKIVGLTWKNGLGFVWNIRN 116 (262)
T ss_dssp EEEEEEE-T--TEEEEEEEETTEEEEEEECTTTCCE---EEEEECC-TTCCEEEEEEET-TEEEEEESSSSEEEEEETTT
T ss_pred cceEEEE-C--CEEEEECCCCCCceEEEEECCCCcE---EEEEecC-CccceeEEEEeC-CEEEEEEeeCCEEEEEECcc
Confidence 4688886 3 67777888766 899999987743 3333322 233332222231 23344444578899998764
Q ss_pred CCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccc-cccCC-Ccee
Q 022111 136 DGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPA-LQMHS-DWVR 213 (302)
Q Consensus 136 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~-~~~h~-~~v~ 213 (302)
.... ..+.... .. ..++ .+++.|+.+..++.|.++|..+...... +.. ..+.. ..++
T Consensus 117 ~~~~--~ti~~~~-eG-~glt----------------~dg~~L~~SdGs~~i~~iDp~T~~v~~~-I~V~~~g~~~~~lN 175 (262)
T 3nol_A 117 LRQV--RSFNYDG-EG-WGLT----------------HNDQYLIMSDGTPVLRFLDPESLTPVRT-ITVTAHGEELPELN 175 (262)
T ss_dssp CCEE--EEEECSS-CC-CCEE----------------ECSSCEEECCSSSEEEEECTTTCSEEEE-EECEETTEECCCEE
T ss_pred CcEE--EEEECCC-Cc-eEEe----------------cCCCEEEEECCCCeEEEEcCCCCeEEEE-EEeccCCccccccc
Confidence 3222 1221110 10 1111 1234455544578899999776421111 111 11122 3356
Q ss_pred EEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeee--ec-------cCCCcEEEEEEccCCCEEEEecCC
Q 022111 214 SVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRV--LK-------DFKTPVWSVSWSLTGNLLAVADAN 279 (302)
Q Consensus 214 ~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~--~~-------~~~~~v~~~~~spdg~~la~~~~d 279 (302)
.+.|. + +...+..-.+..|.+.|.++..-...-.+ +. ........|||+|+++.|-+++..
T Consensus 176 ELe~~-~----G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 176 ELEWV-D----GEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EEEEE-T----TEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred eeEEE-C----CEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 67776 4 35566665678899988865421100011 00 112356899999998888777655
No 245
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.60 E-value=0.02 Score=46.90 Aligned_cols=229 Identities=12% Similarity=0.003 Sum_probs=122.2
Q ss_pred EEEEeeCCCcEEEEeecCCCceE---EEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecCC
Q 022111 25 RLATASSDSSIKIIGLSNSASQH---LATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDH 101 (302)
Q Consensus 25 ~l~s~~~d~~v~lw~~~~~~~~~---~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h 101 (302)
+|+-+. .+.|+.+++....... ...+.........++|.+. .+.++++...++.|..+++..... ...+...
T Consensus 3 ~l~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~-~~~ly~~d~~~~~I~~~~~~g~~~---~~~~~~~ 77 (267)
T 1npe_A 3 HLLFAQ-TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCV-DKVVYWTDISEPSIGRASLHGGEP---TTIIRQD 77 (267)
T ss_dssp EEEEEE-EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETT-TTEEEEEETTTTEEEEEESSSCCC---EEEECTT
T ss_pred EEEEEc-CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecC-CCEEEEEECCCCEEEEEecCCCCc---EEEEECC
Confidence 444443 2467777775432110 1111112234668888753 356666777788999999865421 1122222
Q ss_pred CCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEe
Q 022111 102 KSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASC 181 (302)
Q Consensus 102 ~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 181 (302)
......+++.|+. +.+.++-...+.|.+++...... . .... ........++++|+. +..+++.
T Consensus 78 ~~~p~~ia~d~~~-~~lyv~d~~~~~I~~~~~~g~~~-~-~~~~-~~~~~P~~i~vd~~~-------------g~lyv~~ 140 (267)
T 1npe_A 78 LGSPEGIALDHLG-RTIFWTDSQLDRIEVAKMDGTQR-R-VLFD-TGLVNPRGIVTDPVR-------------GNLYWTD 140 (267)
T ss_dssp CCCEEEEEEETTT-TEEEEEETTTTEEEEEETTSCSC-E-EEEC-SSCSSEEEEEEETTT-------------TEEEEEE
T ss_pred CCCccEEEEEecC-CeEEEEECCCCEEEEEEcCCCCE-E-EEEE-CCCCCccEEEEeeCC-------------CEEEEEE
Confidence 3467899998863 44455555567888887642211 1 1111 111234667776642 3444544
Q ss_pred eC--CCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCC
Q 022111 182 GC--DNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKT 259 (302)
Q Consensus 182 ~~--D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~ 259 (302)
.. .+.|..+++..... ..+. ...-...+.++++|++ +...++-...+.|..+|..... ...+.....
T Consensus 141 ~~~~~~~I~~~~~dg~~~--~~~~--~~~~~~P~gia~d~~~---~~lyv~d~~~~~I~~~~~~g~~---~~~~~~~~~- 209 (267)
T 1npe_A 141 WNRDNPKIETSHMDGTNR--RILA--QDNLGLPNGLTFDAFS---SQLCWVDAGTHRAECLNPAQPG---RRKVLEGLQ- 209 (267)
T ss_dssp CCSSSCEEEEEETTSCCC--EEEE--CTTCSCEEEEEEETTT---TEEEEEETTTTEEEEEETTEEE---EEEEEECCC-
T ss_pred CCCCCcEEEEEecCCCCc--EEEE--ECCCCCCcEEEEcCCC---CEEEEEECCCCEEEEEecCCCc---eEEEecCCC-
Confidence 33 35677777653211 1111 1122356889999975 3556677778899999986421 112222222
Q ss_pred cEEEEEEccCCCEEEEecCC--ceEEeeecC
Q 022111 260 PVWSVSWSLTGNLLAVADAN--NVTLWKEAV 288 (302)
Q Consensus 260 ~v~~~~~spdg~~la~~~~d--~i~~w~~~~ 288 (302)
...+++. ++..|.++... .|.+++...
T Consensus 210 ~P~gi~~--d~~~lyva~~~~~~v~~~d~~~ 238 (267)
T 1npe_A 210 YPFAVTS--YGKNLYYTDWKTNSVIAMDLAI 238 (267)
T ss_dssp SEEEEEE--ETTEEEEEETTTTEEEEEETTT
T ss_pred CceEEEE--eCCEEEEEECCCCeEEEEeCCC
Confidence 3456665 45555555433 688887643
No 246
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.58 E-value=0.02 Score=47.09 Aligned_cols=183 Identities=8% Similarity=0.015 Sum_probs=103.5
Q ss_pred eEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEE-ecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCcee
Q 022111 15 HDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLAT-LKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWT 93 (302)
Q Consensus 15 ~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~-~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~ 93 (302)
..+.|+ ++....+.+.++.|+.+|+.+... +.. +... ..--.+.+.. +++.+..-.++.+.++|.++. +
T Consensus 58 qGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv--~~~~l~~~-~FgeGit~~g---~~Ly~ltw~~~~v~V~D~~Tl---~ 127 (268)
T 3nok_A 58 QGLVFH-QGHFFESTGHQGTLRQLSLESAQP--VWMERLGN-IFAEGLASDG---ERLYQLTWTEGLLFTWSGMPP---Q 127 (268)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEECCSSCSSC--SEEEECTT-CCEEEEEECS---SCEEEEESSSCEEEEEETTTT---E
T ss_pred ceEEEE-CCEEEEEcCCCCEEEEEECCCCcE--EeEECCCC-cceeEEEEeC---CEEEEEEccCCEEEEEECCcC---c
Confidence 567777 466777888999999999876432 222 3321 1122365532 455556667899999998775 3
Q ss_pred EEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCC---CeEEEEeCCCCCCCceeecc
Q 022111 94 QAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPV---GVTSVSWAPAMAPGALVGLG 170 (302)
Q Consensus 94 ~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~~~~~~~ 170 (302)
.+.++.. ...-..++ +| +..|+.+..++.|.++|..+.......... .+.. .++.+.|.
T Consensus 128 ~~~ti~~-~~eGwGLt--~D--g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~-~~g~~v~~lNeLe~~------------ 189 (268)
T 3nok_A 128 RERTTRY-SGEGWGLC--YW--NGKLVRSDGGTMLTFHEPDGFALVGAVQVK-LRGQPVELINELECA------------ 189 (268)
T ss_dssp EEEEEEC-SSCCCCEE--EE--TTEEEEECSSSEEEEECTTTCCEEEEEECE-ETTEECCCEEEEEEE------------
T ss_pred EEEEEeC-CCceeEEe--cC--CCEEEEECCCCEEEEEcCCCCeEEEEEEeC-CCCcccccccccEEe------------
Confidence 4555543 22223443 45 446666666888888886543222211111 1111 23445554
Q ss_pred cCCCceeEEEeeCCCcEEEEEEecCccc----cc-cccc----cccCCCceeEEEeeCCCCCCccEEEEE
Q 022111 171 LLDPVQKLASCGCDNTVKVWKMYNGIWK----MD-CFPA----LQMHSDWVRSVAWAPNLGLPKSTIASA 231 (302)
Q Consensus 171 ~~~~~~~l~s~~~D~~v~iwd~~~~~~~----~~-~~~~----~~~h~~~v~~v~~~p~~~~~~~~l~s~ 231 (302)
++..++..-.++.|.+.|..++... +. +... ...-.+.-+.|+|+|+. +..++||
T Consensus 190 ---dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~---~rlfVTG 253 (268)
T 3nok_A 190 ---NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGS---GRIFMTG 253 (268)
T ss_dssp ---TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTT---CCEEEEE
T ss_pred ---CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCC---CEEEEeC
Confidence 2456666666788888888776321 00 0000 01112456889999986 4677777
No 247
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.55 E-value=0.034 Score=47.97 Aligned_cols=226 Identities=12% Similarity=0.062 Sum_probs=113.7
Q ss_pred CCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCC
Q 022111 23 GKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHK 102 (302)
Q Consensus 23 ~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~ 102 (302)
+..++.++.++.|..+|..++. .+................ +..++.++.++.+..+|.+++. ....+....
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~--~~W~~~~~~~~~~~p~~~----~~~v~v~~~~g~l~~~d~~tG~---~~W~~~~~~ 173 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGT--VAWQTKVAGEALSRPVVS----DGLVLIHTSNGQLQALNEADGA---VKWTVNLDM 173 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCC--EEEEEECSSCCCSCCEEE----TTEEEEECTTSEEEEEETTTCC---EEEEEECCC
T ss_pred CCEEEEEcCCCEEEEEECCCCC--EEEEEeCCCceEcCCEEE----CCEEEEEcCCCeEEEEECCCCc---EEEEEeCCC
Confidence 4567778889999998876543 333332222111112222 3467778889999999987664 222222211
Q ss_pred CCe-----eEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCC---eEEEEeCCCCCCCceeecccCCC
Q 022111 103 SSV-----NSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVG---VTSVSWAPAMAPGALVGLGLLDP 174 (302)
Q Consensus 103 ~~i-----~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~---v~~~~~~~~~~~~~~~~~~~~~~ 174 (302)
... ...... +..+..+..++.+..+|..++.. ........... +..+.- ... ... . .
T Consensus 174 ~~~~~~~~~~~~~~----~~~v~~g~~~g~l~~~d~~tG~~--~w~~~~~~~~~~~~~~~~~~-~~~--~p~-----~-~ 238 (376)
T 3q7m_A 174 PSLSLRGESAPTTA----FGAAVVGGDNGRVSAVLMEQGQM--IWQQRISQATGSTEIDRLSD-VDT--TPV-----V-V 238 (376)
T ss_dssp -----CCCCCCEEE----TTEEEECCTTTEEEEEETTTCCE--EEEEECCC-----------C-CCC--CCE-----E-E
T ss_pred CceeecCCCCcEEE----CCEEEEEcCCCEEEEEECCCCcE--EEEEecccCCCCcccccccc-cCC--CcE-----E-E
Confidence 110 111121 22577788889999888764321 11111111000 000000 000 000 0 1
Q ss_pred ceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeee
Q 022111 175 VQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVL 254 (302)
Q Consensus 175 ~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~ 254 (302)
+..+..++.++.+..+|..++..... .. .....++... +..|..++.++.|..+|..+....|.....
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~----~~--~~~~~~~~~~------~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~ 306 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWK----RE--LGSVNDFIVD------GNRIYLVDQNDRVMALTIDGGVTLWTQSDL 306 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEE----EC--CCCEEEEEEE------TTEEEEEETTCCEEEEETTTCCEEEEECTT
T ss_pred CCEEEEEecCcEEEEEECCCCcEEee----cc--CCCCCCceEE------CCEEEEEcCCCeEEEEECCCCcEEEeeccc
Confidence 24677777889999999877632111 11 1113333332 256778888999999998765444432211
Q ss_pred ccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecC
Q 022111 255 KDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAV 288 (302)
Q Consensus 255 ~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~ 288 (302)
.. ..+.+... .+..|.+++.+ .+..++...
T Consensus 307 ~~--~~~~~~~~--~~~~l~v~~~~g~l~~~d~~t 337 (376)
T 3q7m_A 307 LH--RLLTSPVL--YNGNLVVGDSEGYLHWINVED 337 (376)
T ss_dssp TT--SCCCCCEE--ETTEEEEECTTSEEEEEETTT
T ss_pred CC--CcccCCEE--ECCEEEEEeCCCeEEEEECCC
Confidence 11 11111121 24556666666 688888654
No 248
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.52 E-value=0.027 Score=46.20 Aligned_cols=210 Identities=12% Similarity=0.155 Sum_probs=120.4
Q ss_pred EecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEE--ecCCCCCeeEEEecCCCCCcEEEEEecCCc
Q 022111 50 TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHT--FNDHKSSVNSIAWAPHELGLSLACGSSDGN 127 (302)
Q Consensus 50 ~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~--~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~ 127 (302)
.+.+-...+..++|.++ .+.+.+....++.|...|.. +. .... +.+. .-.-.+++.++ +.++++.-.++.
T Consensus 21 ~l~g~~~~lSGla~~~~-~~~L~aV~d~~~~I~~ld~~-g~---v~~~i~l~g~-~D~EGIa~~~~--g~~~vs~E~~~~ 92 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQ-SNTLFSTINKPAAIVEMTTN-GD---LIRTIPLDFV-KDLETIEYIGD--NQFVISDERDYA 92 (255)
T ss_dssp ECTTCCSCEEEEEEETT-TTEEEEEEETTEEEEEEETT-CC---EEEEEECSSC-SSEEEEEECST--TEEEEEETTTTE
T ss_pred ECCCcccCcceeEEeCC-CCEEEEEECCCCeEEEEeCC-CC---EEEEEecCCC-CChHHeEEeCC--CEEEEEECCCCc
Confidence 45565567999999864 34555556678888888875 32 2233 3332 44677888765 555566556678
Q ss_pred EEEEEecCCCCee-eeee--c---ccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecC--cccc
Q 022111 128 ISVFTATADGGWD-TTRI--D---QAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNG--IWKM 199 (302)
Q Consensus 128 v~~~~~~~~~~~~-~~~~--~---~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~--~~~~ 199 (302)
+.++++...+... .... . .........++|+|.. +.|.++.+.....||..... ...+
T Consensus 93 l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~--------------~~L~va~E~~p~~i~~~~g~~~~~~l 158 (255)
T 3qqz_A 93 IYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQD--------------HTFWFFKEKNPIEVYKVNGLLSSNEL 158 (255)
T ss_dssp EEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTT--------------TEEEEEEESSSEEEEEEESTTCSSCC
T ss_pred EEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCC--------------CEEEEEECcCCceEEEEcccccCCce
Confidence 8888876554311 1111 1 1223456788888753 34444444445566665421 0011
Q ss_pred ccccc--c--ccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCC------CcEEEEEEccC
Q 022111 200 DCFPA--L--QMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFK------TPVWSVSWSLT 269 (302)
Q Consensus 200 ~~~~~--~--~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~------~~v~~~~~spd 269 (302)
..... + ..+.....+++++|.. +..++.....+.|-++|.+... .....+..+.. ...-.|+|.|+
T Consensus 159 ~i~~~~~~~~~~~~~d~S~l~~dp~t---g~lliLS~~s~~L~~~d~~g~~-~~~~~L~~g~~~l~~~~~qpEGia~d~~ 234 (255)
T 3qqz_A 159 HISKDKALQRQFTLDDVSGAEFNQQK---NTLLVLSHESRALQEVTLVGEV-IGEMSLTKGSRGLSHNIKQAEGVAMDAS 234 (255)
T ss_dssp EEEECHHHHHTCCSSCCCEEEEETTT---TEEEEEETTTTEEEEECTTCCE-EEEEECSTTGGGCSSCCCSEEEEEECTT
T ss_pred eeecchhhccccccCCceeEEEcCCC---CeEEEEECCCCeEEEEcCCCCE-EEEEEcCCccCCcccccCCCCeeEECCC
Confidence 11100 0 1123346899999974 5777788888899999876431 11111212211 24678999999
Q ss_pred CCEEEEecCCceEEee
Q 022111 270 GNLLAVADANNVTLWK 285 (302)
Q Consensus 270 g~~la~~~~d~i~~w~ 285 (302)
|+++++.-.|-+..+.
T Consensus 235 G~lyIvsE~n~~y~f~ 250 (255)
T 3qqz_A 235 GNIYIVSEPNRFYRFT 250 (255)
T ss_dssp CCEEEEETTTEEEEEE
T ss_pred CCEEEEcCCceEEEEE
Confidence 9988886555444443
No 249
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.45 E-value=0.0092 Score=56.37 Aligned_cols=79 Identities=11% Similarity=0.170 Sum_probs=45.8
Q ss_pred CcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEE
Q 022111 185 NTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSV 264 (302)
Q Consensus 185 ~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~ 264 (302)
+.|..||+.+++..-.. . +...+....+.+++ ..++.++.|+.+++||.++.+..|...+ .......-+
T Consensus 457 g~l~A~D~~tG~~~W~~----~-~~~~~~~g~~~~~g----~~v~~g~~dg~l~a~D~~tG~~lw~~~~--~~~~~~~p~ 525 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSV----E-HVSPWNGGTLTTAG----NVVFQGTADGRLVAYHAATGEKLWEAPT--GTGVVAAPS 525 (677)
T ss_dssp EEEEEEETTTTEEEEEE----E-ESSSCCCCEEEETT----TEEEEECTTSEEEEEETTTCCEEEEEEC--SSCCCSCCE
T ss_pred cEEEEEeCCCCcEEeec----C-CCCCCcCcceEeCC----CEEEEECCCCcEEEEECCCCceeeeeeC--CCCcccCCE
Confidence 67889998876421111 1 12223333444443 5678889999999999987654443222 222222345
Q ss_pred EEccCCCEEE
Q 022111 265 SWSLTGNLLA 274 (302)
Q Consensus 265 ~~spdg~~la 274 (302)
.|+++|++++
T Consensus 526 ~y~~~G~~~v 535 (677)
T 1kb0_A 526 TYMVDGRQYV 535 (677)
T ss_dssp EEEETTEEEE
T ss_pred EEEeCCEEEE
Confidence 6778886553
No 250
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.40 E-value=0.053 Score=46.71 Aligned_cols=238 Identities=12% Similarity=0.090 Sum_probs=114.8
Q ss_pred CCEEEEeeCCCcEEEEeecCCCceEEEEecCc-------ccCe-EEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeE
Q 022111 23 GKRLATASSDSSIKIIGLSNSASQHLATLKGH-------RGPV-WQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQ 94 (302)
Q Consensus 23 ~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h-------~~~v-~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~ 94 (302)
+..+..++.++.|..+|..++...-...+... ...+ ..+... +..|+.++.++.|..+|.+++. .
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~v~~~~g~l~a~d~~tG~---~ 125 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVS----GGHVYIGSEKAQVYALNTSDGT---V 125 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEE----TTEEEEEETTSEEEEEETTTCC---E
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEe----CCEEEEEcCCCEEEEEECCCCC---E
Confidence 45677788888899988754432111222111 1223 223332 4567778899999999987764 2
Q ss_pred EEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCC
Q 022111 95 AHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDP 174 (302)
Q Consensus 95 ~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~ 174 (302)
...+............. +..++.++.++.+..+|..++.. ....... ..+.... ... ...+ .
T Consensus 126 ~W~~~~~~~~~~~p~~~----~~~v~v~~~~g~l~~~d~~tG~~--~W~~~~~--~~~~~~~--~~~--~~~~-----~- 187 (376)
T 3q7m_A 126 AWQTKVAGEALSRPVVS----DGLVLIHTSNGQLQALNEADGAV--KWTVNLD--MPSLSLR--GES--APTT-----A- 187 (376)
T ss_dssp EEEEECSSCCCSCCEEE----TTEEEEECTTSEEEEEETTTCCE--EEEEECC--C-----C--CCC--CCEE-----E-
T ss_pred EEEEeCCCceEcCCEEE----CCEEEEEcCCCeEEEEECCCCcE--EEEEeCC--CCceeec--CCC--CcEE-----E-
Confidence 22322222111111222 22677888899999998764432 1111101 1110000 000 0000 1
Q ss_pred ceeEEEeeCCCcEEEEEEecCccccccc-cccccCC--CceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceee
Q 022111 175 VQKLASCGCDNTVKVWKMYNGIWKMDCF-PALQMHS--DWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEG 251 (302)
Q Consensus 175 ~~~l~s~~~D~~v~iwd~~~~~~~~~~~-~~~~~h~--~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~ 251 (302)
+..++.++.++.+..+|..++....... ....+.. ..+..+.-.|- ..+..+..++.++.+..+|.++....|..
T Consensus 188 ~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~v~~~~~~g~l~~~d~~tG~~~w~~ 265 (376)
T 3q7m_A 188 FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPV--VVNGVVFALAYNGNLTALDLRSGQIMWKR 265 (376)
T ss_dssp TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCE--EETTEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcE--EECCEEEEEecCcEEEEEECCCCcEEeec
Confidence 2457777888999999987663211100 0000000 00000111121 01256777888999999998765444432
Q ss_pred eeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCce-EEE
Q 022111 252 RVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGE-WQQ 294 (302)
Q Consensus 252 ~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~-~~~ 294 (302)
. . .....+.. ++..|.+++.+ .+..++...... |..
T Consensus 266 ~----~-~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~ 303 (376)
T 3q7m_A 266 E----L-GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQ 303 (376)
T ss_dssp C----C-CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEE
T ss_pred c----C-CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEee
Confidence 2 1 12333333 34455455445 788888643332 543
No 251
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.38 E-value=0.0058 Score=51.53 Aligned_cols=221 Identities=14% Similarity=0.051 Sum_probs=110.3
Q ss_pred ceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCce
Q 022111 13 TVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDW 92 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~ 92 (302)
.+.++....++. |..++.+ +..+|.. ++.+..+..+........+. +..|..++.++.+..+|.. +.
T Consensus 61 ~~~~~~~~~~g~-l~v~t~~--l~~~d~~---g~~~~~~~~~~~~~~~~~~~----~~~l~v~t~~~~l~~~d~~-g~-- 127 (330)
T 3hxj_A 61 IECRPSIGKDGT-IYFGSDK--VYAINPD---GTEKWRFDTKKAIVSDFTIF----EDILYVTSMDGHLYAINTD-GT-- 127 (330)
T ss_dssp EEECCEETTTTE-ECCSSCE--EEEECCC---GGGGGGSCC-----CCEEEE----TTEEEEECTTSEEEEECTT-SC--
T ss_pred cccceEEecCCc-EEEecCc--EEEECCC---CcEEEEEECCCCcccCceEE----CCEEEEEecCCEEEEEcCC-CC--
Confidence 445666666664 4445444 7777642 12221222122222223332 2356677788999999876 32
Q ss_pred eEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccC
Q 022111 93 TQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLL 172 (302)
Q Consensus 93 ~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~ 172 (302)
....+......+.++...++ +. +..++.++.+..++.. . .. ..... .....+.++...+
T Consensus 128 -~~~~~~~~~~~~~~~~~~~~--g~-l~vgt~~~~l~~~d~~-g-~~-~~~~~-~~~~~~~~~~~d~------------- 186 (330)
T 3hxj_A 128 -EKWRFKTKKAIYATPIVSED--GT-IYVGSNDNYLYAINPD-G-TE-KWRFK-TNDAITSAASIGK------------- 186 (330)
T ss_dssp -EEEEEECSSCCCSCCEECTT--SC-EEEECTTSEEEEECTT-S-CE-EEEEE-CSSCCCSCCEECT-------------
T ss_pred -EEEEEcCCCceeeeeEEcCC--CE-EEEEcCCCEEEEECCC-C-CE-eEEEe-cCCCceeeeEEcC-------------
Confidence 23333334445566666554 43 6667778888888765 2 21 11111 1111222222222
Q ss_pred CCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeee
Q 022111 173 DPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGR 252 (302)
Q Consensus 173 ~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~ 252 (302)
+ ..|..++ +.|..+| .++.. ...+......+.++...+++ .|..++.++.|..+|... ...+...
T Consensus 187 -~-g~l~v~t--~~l~~~d-~~g~~----~~~~~~~~~~~~~~~~~~~g-----~l~v~t~~~gl~~~~~~g-~~~~~~~ 251 (330)
T 3hxj_A 187 -D-GTIYFGS--DKVYAIN-PDGTE----KWNFYAGYWTVTRPAISEDG-----TIYVTSLDGHLYAINPDG-TEKWRFK 251 (330)
T ss_dssp -T-CCEEEES--SSEEEEC-TTSCE----EEEECCSSCCCSCCEECTTS-----CEEEEETTTEEEEECTTS-CEEEEEE
T ss_pred -C-CEEEEEe--CEEEEEC-CCCcE----EEEEccCCcceeceEECCCC-----eEEEEcCCCeEEEECCCC-CEeEEee
Confidence 2 2344444 7788888 54421 11222233557777777663 466677788888886422 2222211
Q ss_pred eeccCCCcEEEEEEccCCCEEEEecCC-ceEEeee
Q 022111 253 VLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKE 286 (302)
Q Consensus 253 ~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~ 286 (302)
.....+.++...++|++.+ ++.+ .+..++.
T Consensus 252 ---~~~~~~~~~~~~~~g~l~v-~t~~ggl~~~d~ 282 (330)
T 3hxj_A 252 ---TGKRIESSPVIGNTDTIYF-GSYDGHLYAINP 282 (330)
T ss_dssp ---CSSCCCSCCEECTTSCEEE-ECTTCEEEEECT
T ss_pred ---CCCCccccceEcCCCeEEE-ecCCCCEEEECC
Confidence 1111223345555666554 4445 7888874
No 252
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.38 E-value=0.04 Score=44.79 Aligned_cols=190 Identities=9% Similarity=0.070 Sum_probs=103.8
Q ss_pred cccc--ceeEEEEccCCCEEEEeeCCC--cEEEEeecCCCceEEEEecCcccC-eEEEEeeCCCCCCEEEEEeCCCeEEE
Q 022111 9 GHED--TVHDVAMDFYGKRLATASSDS--SIKIIGLSNSASQHLATLKGHRGP-VWQVAWAHPKFGSILASCSYDGQVII 83 (302)
Q Consensus 9 ~h~~--~v~~~~~s~~~~~l~s~~~d~--~v~lw~~~~~~~~~~~~~~~h~~~-v~~v~~~~~~~~~~l~s~s~D~~i~i 83 (302)
.|.. -...+.|+. +....|.+.+| .|+.+|+.++. .+..+.-.... --.+.+.. +++.+..-.++.+.+
T Consensus 16 phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgk--v~~~~~l~~~~fgeGi~~~~---~~ly~ltw~~~~v~v 89 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGR--ILQRAEVPPPYFGAGIVAWR---DRLIQLTWRNHEGFV 89 (243)
T ss_dssp ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCC--EEEEEECCTTCCEEEEEEET---TEEEEEESSSSEEEE
T ss_pred CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCC--EEEEEeCCCCcceeEEEEeC---CEEEEEEeeCCEEEE
Confidence 4543 345688886 66677777764 89999987643 33333221111 12355432 455556667899999
Q ss_pred EEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCC---CCeEEEEeCCC
Q 022111 84 WKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHP---VGVTSVSWAPA 160 (302)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~~~ 160 (302)
+|.++. ..+.++... ..-..++ ++ +..|..+..++.|.++|..+.......... .+. ..++.+.|.
T Consensus 90 ~D~~tl---~~~~ti~~~-~~Gwglt--~d--g~~L~vSdgs~~l~~iDp~t~~~~~~I~V~-~~g~~~~~lNeLe~~-- 158 (243)
T 3mbr_X 90 YDLATL---TPRARFRYP-GEGWALT--SD--DSHLYMSDGTAVIRKLDPDTLQQVGSIKVT-AGGRPLDNLNELEWV-- 158 (243)
T ss_dssp EETTTT---EEEEEEECS-SCCCEEE--EC--SSCEEEECSSSEEEEECTTTCCEEEEEECE-ETTEECCCEEEEEEE--
T ss_pred EECCcC---cEEEEEeCC-CCceEEe--eC--CCEEEEECCCCeEEEEeCCCCeEEEEEEEc-cCCcccccceeeEEe--
Confidence 998765 345555432 2223443 45 334555566888888886543222111111 111 123444443
Q ss_pred CCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccc----cc-ccccc----ccCCCceeEEEeeCCCCCCccEEEEE
Q 022111 161 MAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWK----MD-CFPAL----QMHSDWVRSVAWAPNLGLPKSTIASA 231 (302)
Q Consensus 161 ~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~----~~-~~~~~----~~h~~~v~~v~~~p~~~~~~~~l~s~ 231 (302)
+++.++..-.+..|.+.|..++... +. +.... ..-.+.-+.|+|+|+. +..++||
T Consensus 159 -------------~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~---~~lfVTG 222 (243)
T 3mbr_X 159 -------------NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEH---DRLFVTG 222 (243)
T ss_dssp -------------TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTT---TEEEEEE
T ss_pred -------------CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCC---CEEEEEC
Confidence 2456666656778888888776321 00 11100 0112356889999985 3667776
No 253
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.35 E-value=0.051 Score=45.58 Aligned_cols=232 Identities=12% Similarity=-0.034 Sum_probs=118.2
Q ss_pred cceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCC-C-eEEEEEcCCC
Q 022111 12 DTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYD-G-QVIIWKEGNQ 89 (302)
Q Consensus 12 ~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D-~-~i~iwd~~~~ 89 (302)
.....++++++++.+++-..++.|..++.... ......+ ......+++.++ ++++++.... + .|..+|..++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~---~~~p~gia~~~d--G~l~vad~~~~~~~v~~~d~~~g 105 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATV---EGKVSGLAFTSN--GDLVATGWNADSIPVVSLVKSDG 105 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEEC---SSEEEEEEECTT--SCEEEEEECTTSCEEEEEECTTS
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeC---CCCceeEEEcCC--CcEEEEeccCCcceEEEEcCCCC
Confidence 34567899999987777667888888886542 1122222 234678888653 6766655433 2 3555565544
Q ss_pred CceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecc--------cCCCCeEEEEeCCCC
Q 022111 90 NDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQ--------AHPVGVTSVSWAPAM 161 (302)
Q Consensus 90 ~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~--------~h~~~v~~~~~~~~~ 161 (302)
. ...+..+. .......++..++ +..+++-...+.|..+|.... ......... ........+ +|+
T Consensus 106 ~-~~~~~~~~-~~~~~~g~~~~~~--~~~~v~d~~~g~i~~~d~~~~-~~~v~~~~~~~~~~~~~~~~~~pngi--s~d- 177 (306)
T 2p4o_A 106 T-VETLLTLP-DAIFLNGITPLSD--TQYLTADSYRGAIWLIDVVQP-SGSIWLEHPMLARSNSESVFPAANGL--KRF- 177 (306)
T ss_dssp C-EEEEEECT-TCSCEEEEEESSS--SEEEEEETTTTEEEEEETTTT-EEEEEEECGGGSCSSTTCCSCSEEEE--EEE-
T ss_pred e-EEEEEeCC-CccccCcccccCC--CcEEEEECCCCeEEEEeCCCC-cEeEEEECCccccccccCCCCcCCCc--CcC-
Confidence 2 22222222 1222344444333 334444445777777664321 001110000 000011222 221
Q ss_pred CCCceeecccCCCceeEEEeeCCCcEEEEEEec-CccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEE
Q 022111 162 APGALVGLGLLDPVQKLASCGCDNTVKVWKMYN-GIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIW 240 (302)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~-~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iw 240 (302)
.+.++++-...+.|.++|+.. +.. .....+.. ......+++.+++ +..++....+.|.++
T Consensus 178 ------------g~~lyv~d~~~~~I~~~~~~~~g~~--~~~~~~~~-~~~P~gi~vd~dG----~l~va~~~~~~V~~~ 238 (306)
T 2p4o_A 178 ------------GNFLYVSNTEKMLLLRIPVDSTDKP--GEPEIFVE-QTNIDDFAFDVEG----NLYGATHIYNSVVRI 238 (306)
T ss_dssp ------------TTEEEEEETTTTEEEEEEBCTTSCB--CCCEEEEE-SCCCSSEEEBTTC----CEEEECBTTCCEEEE
T ss_pred ------------CCEEEEEeCCCCEEEEEEeCCCCCC--CccEEEec-cCCCCCeEECCCC----CEEEEeCCCCeEEEE
Confidence 124566667788899999864 211 11111110 1234567888875 567777677889998
Q ss_pred EeccCCcceeeeeeccCCCcEEEEEEc---cCCCEEEEecC
Q 022111 241 TCAKEGEQWEGRVLKDFKTPVWSVSWS---LTGNLLAVADA 278 (302)
Q Consensus 241 d~~~~~~~~~~~~~~~~~~~v~~~~~s---pdg~~la~~~~ 278 (302)
|... ................+++|. ||++.|.++..
T Consensus 239 ~~~G--~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 239 APDR--STTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp CTTC--CEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred CCCC--CEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 8642 111000011112457899999 89877766544
No 254
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.31 E-value=0.052 Score=44.81 Aligned_cols=193 Identities=7% Similarity=-0.036 Sum_probs=105.3
Q ss_pred eEEEEeeCCCCCCEEEEEeC--CCeEEEEEcCCCCceeEEEEecCCC-CCeeEEEecCCCCCcEEEEEecCCcEEEEEec
Q 022111 58 VWQVAWAHPKFGSILASCSY--DGQVIIWKEGNQNDWTQAHTFNDHK-SSVNSIAWAPHELGLSLACGSSDGNISVFTAT 134 (302)
Q Consensus 58 v~~v~~~~~~~~~~l~s~s~--D~~i~iwd~~~~~~~~~~~~~~~h~-~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~ 134 (302)
...+.|+++ +.++++.+. +++|++.|+.++. .+.++.... .....+++.. +...++.-.++.+.++|..
T Consensus 23 ~~Gl~~~~d--g~Lyvstg~~~~s~v~~iD~~tg~---v~~~i~l~~~~fgeGi~~~g---~~lyv~t~~~~~v~viD~~ 94 (266)
T 2iwa_A 23 TQGLVYAEN--DTLFESTGLYGRSSVRQVALQTGK---VENIHKMDDSYFGEGLTLLN---EKLYQVVWLKNIGFIYDRR 94 (266)
T ss_dssp EEEEEECST--TEEEEEECSTTTCEEEEEETTTCC---EEEEEECCTTCCEEEEEEET---TEEEEEETTCSEEEEEETT
T ss_pred cccEEEeCC--CeEEEECCCCCCCEEEEEECCCCC---EEEEEecCCCcceEEEEEeC---CEEEEEEecCCEEEEEECC
Confidence 468999753 566555553 6899999998764 233332111 1223455542 2345555567899999876
Q ss_pred CCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCC---Cc
Q 022111 135 ADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHS---DW 211 (302)
Q Consensus 135 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~---~~ 211 (302)
+.. ....+..+.+.. ..+. + +++.++.+..++.|.++|..+.... ..+. ...+. ..
T Consensus 95 t~~--v~~~i~~g~~~g-~glt--~--------------Dg~~l~vs~gs~~l~viD~~t~~v~-~~I~-Vg~~~~p~~~ 153 (266)
T 2iwa_A 95 TLS--NIKNFTHQMKDG-WGLA--T--------------DGKILYGSDGTSILYEIDPHTFKLI-KKHN-VKYNGHRVIR 153 (266)
T ss_dssp TTE--EEEEEECCSSSC-CEEE--E--------------CSSSEEEECSSSEEEEECTTTCCEE-EEEE-CEETTEECCC
T ss_pred CCc--EEEEEECCCCCe-EEEE--E--------------CCCEEEEECCCCeEEEEECCCCcEE-EEEE-ECCCCccccc
Confidence 432 112222110111 1122 1 2344445556889999998664211 1111 11111 23
Q ss_pred eeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeee-ecc-----------CCCcEEEEEEccCCCEEEEecCC
Q 022111 212 VRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRV-LKD-----------FKTPVWSVSWSLTGNLLAVADAN 279 (302)
Q Consensus 212 v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~-~~~-----------~~~~v~~~~~spdg~~la~~~~d 279 (302)
.+.+.|. ++ ...+....++.|.+-|..+..-. ..+ +.+ .......++|+|+++.|.+++..
T Consensus 154 ~nele~~-dg----~lyvn~~~~~~V~vID~~tg~V~--~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~ 226 (266)
T 2iwa_A 154 LNELEYI-NG----EVWANIWQTDCIARISAKDGTLL--GWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL 226 (266)
T ss_dssp EEEEEEE-TT----EEEEEETTSSEEEEEETTTCCEE--EEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT
T ss_pred ceeEEEE-CC----EEEEecCCCCeEEEEECCCCcEE--EEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC
Confidence 6678887 53 55666667889999998764311 111 111 11356899999999877666554
Q ss_pred --ceEEeee
Q 022111 280 --NVTLWKE 286 (302)
Q Consensus 280 --~i~~w~~ 286 (302)
++..-+.
T Consensus 227 ~~~v~~i~l 235 (266)
T 2iwa_A 227 WPKLFEIKL 235 (266)
T ss_dssp CSEEEEEEE
T ss_pred CCeEEEEEE
Confidence 5666554
No 255
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.27 E-value=0.14 Score=49.03 Aligned_cols=239 Identities=12% Similarity=0.084 Sum_probs=131.7
Q ss_pred ccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEec------CcccCeEEEEeeCCCCCCEEEEEeCCCeEEEE
Q 022111 11 EDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLK------GHRGPVWQVAWAHPKFGSILASCSYDGQVIIW 84 (302)
Q Consensus 11 ~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~------~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iw 84 (302)
...|.++..+.+|...+ |..++-+..|+...........-. .....|.++...+ ++++|-.|..++-+..+
T Consensus 356 ~~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~--~g~~lWigt~~~Gl~~~ 432 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLWI-GTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE--KKSLVYIGTHAGGLSIL 432 (795)
T ss_dssp CSSEEEEEECTTSCEEE-EESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEET--TTTEEEEEETTTEEEEE
T ss_pred CCeeEEEEECCCCCEEE-EECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC--CCCEEEEEeCcCceeEE
Confidence 34689999888887554 677777888886543322221100 1235688888753 36635567777778899
Q ss_pred EcCCCCceeEEEEec-----CCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeec----ccCCCCeEEE
Q 022111 85 KEGNQNDWTQAHTFN-----DHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRID----QAHPVGVTSV 155 (302)
Q Consensus 85 d~~~~~~~~~~~~~~-----~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~----~~h~~~v~~~ 155 (302)
|..++. ...+. .....|.++...++ +.+.+ |+. +-+.+|+..+. .+...... ......|.++
T Consensus 433 d~~~~~----~~~~~~~~~~l~~~~v~~i~~d~~--g~lwi-gt~-~Gl~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~i 503 (795)
T 4a2l_A 433 HRNSGQ----VENFNQRNSQLVNENVYAILPDGE--GNLWL-GTL-SALVRFNPEQR-SFTTIEKEKDGTPVVSKQITTL 503 (795)
T ss_dssp ETTTCC----EEEECTTTSCCSCSCEEEEEECSS--SCEEE-EES-SCEEEEETTTT-EEEECCBCTTCCBCCCCCEEEE
T ss_pred eCCCCc----EEEeecCCCCcCCCeeEEEEECCC--CCEEE-Eec-CceeEEeCCCC-eEEEccccccccccCCceEEEE
Confidence 876542 22222 13457888877654 54433 344 45777775432 22111100 0112345666
Q ss_pred EeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccc-cccccCCCceeEEEeeCCCCCCccEEEEEecC
Q 022111 156 SWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCF-PALQMHSDWVRSVAWAPNLGLPKSTIASASQD 234 (302)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~-~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D 234 (302)
...+. +. |-.|+. +-+.+||..+....+... .........|.++...+++ . |-.|+..
T Consensus 504 ~~d~~--------------g~-lWigt~-~Gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g----~-lWigT~~ 562 (795)
T 4a2l_A 504 FRDSH--------------KR-LWIGGE-EGLSVFKQEGLDIQKASILPVSNVTKLFTNCIYEASNG----I-IWVGTRE 562 (795)
T ss_dssp EECTT--------------CC-EEEEES-SCEEEEEEETTEEEECCCSCSCGGGGSCEEEEEECTTS----C-EEEEESS
T ss_pred EECCC--------------CC-EEEEeC-CceEEEeCCCCeEEEecCCCCCCCCCCeeEEEEECCCC----C-EEEEeCC
Confidence 55432 23 444444 458889987653211000 0011245679999888774 3 3334444
Q ss_pred CeEEEEEeccCCcceeeeee--ccC-CCcEEEEEEccCCCEEEEecCCceEEeeec
Q 022111 235 GTVVIWTCAKEGEQWEGRVL--KDF-KTPVWSVSWSLTGNLLAVADANNVTLWKEA 287 (302)
Q Consensus 235 ~~i~iwd~~~~~~~~~~~~~--~~~-~~~v~~~~~spdg~~la~~~~d~i~~w~~~ 287 (302)
.|..||..... .. ... .+. ...|.++...++|++.+++ .++|..|+..
T Consensus 563 -Gl~~~d~~~~~--~~-~~~~~~gl~~~~i~~i~~d~~g~lWi~t-~~Gl~~~~~~ 613 (795)
T 4a2l_A 563 -GFYCFNEKDKQ--IK-RYNTTNGLPNNVVYGILEDSFGRLWLST-NRGISCFNPE 613 (795)
T ss_dssp -CEEEEETTTTE--EE-EECGGGTCSCSCEEEEEECTTSCEEEEE-TTEEEEEETT
T ss_pred -CceeECCCCCc--EE-EeCCCCCCchhheEEEEECCCCCEEEEc-CCceEEEcCC
Confidence 57778865421 11 111 112 2458899998899877666 4678888754
No 256
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.27 E-value=0.058 Score=44.40 Aligned_cols=185 Identities=8% Similarity=-0.041 Sum_probs=100.9
Q ss_pred CeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCee--EEEecCCCCCcEEEEEecCCcEEEEEec
Q 022111 57 PVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVN--SIAWAPHELGLSLACGSSDGNISVFTAT 134 (302)
Q Consensus 57 ~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~--~l~~~pd~~~~~l~sg~~d~~v~~~~~~ 134 (302)
....+.|.. +.++++.+.++.|+.+|++++...... +. .... .+++.. ..+......++.+.+||..
T Consensus 56 ftqGL~~~~---~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~---~~~FgeGit~~g---~~Ly~ltw~~~~v~V~D~~ 124 (268)
T 3nok_A 56 FTQGLVFHQ---GHFFESTGHQGTLRQLSLESAQPVWME--RL---GNIFAEGLASDG---ERLYQLTWTEGLLFTWSGM 124 (268)
T ss_dssp CEEEEEEET---TEEEEEETTTTEEEECCSSCSSCSEEE--EC---TTCCEEEEEECS---SCEEEEESSSCEEEEEETT
T ss_pred ccceEEEEC---CEEEEEcCCCCEEEEEECCCCcEEeEE--CC---CCcceeEEEEeC---CEEEEEEccCCEEEEEECC
Confidence 346888862 577888889999999999887543222 22 2223 344433 2344445567889999876
Q ss_pred CCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCC---Cc
Q 022111 135 ADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHS---DW 211 (302)
Q Consensus 135 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~---~~ 211 (302)
+.... ..+... ... ..++ .+++.|+.+..++.|.++|..+.... ..+. ...+. ..
T Consensus 125 Tl~~~--~ti~~~-~eG-wGLt----------------~Dg~~L~vSdGs~~l~~iDp~T~~v~-~~I~-V~~~g~~v~~ 182 (268)
T 3nok_A 125 PPQRE--RTTRYS-GEG-WGLC----------------YWNGKLVRSDGGTMLTFHEPDGFALV-GAVQ-VKLRGQPVEL 182 (268)
T ss_dssp TTEEE--EEEECS-SCC-CCEE----------------EETTEEEEECSSSEEEEECTTTCCEE-EEEE-CEETTEECCC
T ss_pred cCcEE--EEEeCC-Cce-eEEe----------------cCCCEEEEECCCCEEEEEcCCCCeEE-EEEE-eCCCCccccc
Confidence 43211 222111 010 1111 12345555555889999997664211 1111 11111 23
Q ss_pred eeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeee--e--------ccCCCcEEEEEEccCCCEEEEecCC
Q 022111 212 VRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRV--L--------KDFKTPVWSVSWSLTGNLLAVADAN 279 (302)
Q Consensus 212 v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~--~--------~~~~~~v~~~~~spdg~~la~~~~d 279 (302)
++.+.|. + +...+..-.+..|.+.|.++..-...-.+ + .........|||+|+++.|-+++..
T Consensus 183 lNeLe~~-d----G~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 183 INELECA-N----GVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp EEEEEEE-T----TEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred ccccEEe-C----CEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 5677776 4 35566665677888888865421100011 0 0122457899999987666666544
No 257
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.12 E-value=0.13 Score=45.62 Aligned_cols=155 Identities=10% Similarity=0.091 Sum_probs=83.7
Q ss_pred eeEEEEcc-CCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCC-EEEEEeCCC----eEEEEEcC
Q 022111 14 VHDVAMDF-YGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGS-ILASCSYDG----QVIIWKEG 87 (302)
Q Consensus 14 v~~~~~s~-~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~-~l~s~s~D~----~i~iwd~~ 87 (302)
...++++| ++..|..+...+.|+.++..... +..+.........|+|.++ ++ ++++...++ .+...+..
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~---v~~~~~~~~~P~~ia~d~~--G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEY---VSTVYSGLSKVRTICWTHE--ADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTE---EEEEECCCSCEEEEEECTT--SSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCE---EEEEecCCCCcceEEEeCC--CCEEEEEeCCCCcccceEEEEeCC
Confidence 45688897 35556665555778877775432 2233333445678999753 67 444443222 23333332
Q ss_pred CCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCe-eeeeecccCCCCeEEEEeCCCCCCCce
Q 022111 88 NQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGW-DTTRIDQAHPVGVTSVSWAPAMAPGAL 166 (302)
Q Consensus 88 ~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~ 166 (302)
. . +.....+.. ......+++.|+. +.++++-...+.|..++.... .. ..... .....-..++++|++
T Consensus 214 g-~-~~~~~~l~~-~~~p~giavdp~~-g~lyv~d~~~~~V~~~~~~~~-~~~~~~~~--~~~~~P~gia~~pdG----- 281 (430)
T 3tc9_A 214 S-G-FKVITELTK-GQNCNGAETHPIN-GELYFNSWNAGQVFRYDFTTQ-ETTPLFTI--QDSGWEFHIQFHPSG----- 281 (430)
T ss_dssp G-T-SCSEEEEEE-CSSCCCEEECTTT-CCEEEEETTTTEEEEEETTTT-EEEEEEEC--SSSSCCEEEEECTTS-----
T ss_pred C-c-eeeeeeecc-CCCceEEEEeCCC-CEEEEEECCCCEEEEEECCCC-cEEEEEEc--CCCCcceeEEEcCCC-----
Confidence 2 1 111112211 2235778888842 555555556678888876422 11 11111 111234678888764
Q ss_pred eecccCCCce-eEEEeeCCCcEEEEEEec
Q 022111 167 VGLGLLDPVQ-KLASCGCDNTVKVWKMYN 194 (302)
Q Consensus 167 ~~~~~~~~~~-~l~s~~~D~~v~iwd~~~ 194 (302)
+ ++++-...+.|..++...
T Consensus 282 ---------~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 282 ---------NYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp ---------SEEEEEETTTTEEEEEEEET
T ss_pred ---------CEEEEEECCCCEEEEEeCCc
Confidence 4 566667778899988764
No 258
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.11 E-value=0.095 Score=43.92 Aligned_cols=215 Identities=11% Similarity=0.070 Sum_probs=107.8
Q ss_pred eEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecC
Q 022111 46 QHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD 125 (302)
Q Consensus 46 ~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d 125 (302)
+.+..+... .....++|.+ +++++++-..++.|..||.... ....+. ....+..+++.|+ +.++++....
T Consensus 23 ~~~~~~p~~-~~pegia~~~--~g~lyv~d~~~~~I~~~d~~g~----~~~~~~-~~~~p~gia~~~d--G~l~vad~~~ 92 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAP--DGTIFVTNHEVGEIVSITPDGN----QQIHAT-VEGKVSGLAFTSN--GDLVATGWNA 92 (306)
T ss_dssp EEEEEECTT-CCEEEEEECT--TSCEEEEETTTTEEEEECTTCC----EEEEEE-CSSEEEEEEECTT--SCEEEEEECT
T ss_pred eEeEeCCCC-CCcceEEECC--CCCEEEEeCCCCeEEEECCCCc----eEEEEe-CCCCceeEEEcCC--CcEEEEeccC
Confidence 334445332 3456788875 3777777768889998887542 111222 2346789999887 5544443332
Q ss_pred C--cEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccc---
Q 022111 126 G--NISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMD--- 200 (302)
Q Consensus 126 ~--~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~--- 200 (302)
. .|..++..+ +..... ...........++..+ .+..+++-..++.|.++|..++...+.
T Consensus 93 ~~~~v~~~d~~~-g~~~~~-~~~~~~~~~~g~~~~~--------------~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~ 156 (306)
T 2p4o_A 93 DSIPVVSLVKSD-GTVETL-LTLPDAIFLNGITPLS--------------DTQYLTADSYRGAIWLIDVVQPSGSIWLEH 156 (306)
T ss_dssp TSCEEEEEECTT-SCEEEE-EECTTCSCEEEEEESS--------------SSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred CcceEEEEcCCC-CeEEEE-EeCCCccccCcccccC--------------CCcEEEEECCCCeEEEEeCCCCcEeEEEEC
Confidence 2 344455332 222111 1001111112222111 234455555677788887653211100
Q ss_pred -ccc--ccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEec
Q 022111 201 -CFP--ALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVAD 277 (302)
Q Consensus 201 -~~~--~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~ 277 (302)
.+. ...+.-...+.| +|++ +..+++-+..+.|..+++............... .....+++.++|+++++..
T Consensus 157 ~~~~~~~~~~~~~~pngi--s~dg---~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-~~P~gi~vd~dG~l~va~~ 230 (306)
T 2p4o_A 157 PMLARSNSESVFPAANGL--KRFG---NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-TNIDDFAFDVEGNLYGATH 230 (306)
T ss_dssp GGGSCSSTTCCSCSEEEE--EEET---TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-CCCSSEEEBTTCCEEEECB
T ss_pred CccccccccCCCCcCCCc--CcCC---CEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-CCCCCeEECCCCCEEEEeC
Confidence 000 001111234455 7775 245677777889999998642111111111111 2345688999998765554
Q ss_pred CC-ceEEeeecCCceEEE
Q 022111 278 AN-NVTLWKEAVDGEWQQ 294 (302)
Q Consensus 278 ~d-~i~~w~~~~~~~~~~ 294 (302)
.. .|.+++. +|....
T Consensus 231 ~~~~V~~~~~--~G~~~~ 246 (306)
T 2p4o_A 231 IYNSVVRIAP--DRSTTI 246 (306)
T ss_dssp TTCCEEEECT--TCCEEE
T ss_pred CCCeEEEECC--CCCEEE
Confidence 43 7888874 355433
No 259
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.06 E-value=0.24 Score=47.52 Aligned_cols=247 Identities=8% Similarity=0.008 Sum_probs=135.7
Q ss_pred ccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEec----CcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEc
Q 022111 11 EDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLK----GHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE 86 (302)
Q Consensus 11 ~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~----~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~ 86 (302)
...|.++..+.+|... .|+.++-|.+++............. -....|.++.... +|++ -.|..++-|..|+.
T Consensus 309 ~~~i~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~--~g~l-WiGt~~~Gl~~~~~ 384 (795)
T 4a2l_A 309 QRSVRSIFMDSQGGMW-LGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDK--DKNL-WIGTNDGGLNLYNP 384 (795)
T ss_dssp SSCEEEEEECTTSCEE-EEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECT--TSCE-EEEESSSCEEEECT
T ss_pred CCcEEEEEEeCCcCEE-EEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECC--CCCE-EEEECCCCeEEEcC
Confidence 3579999999988755 4677777888876433222221111 1234688887643 3554 45677767888887
Q ss_pred CCCCceeEEEEe------cCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeec--ccCCCCeEEEEeC
Q 022111 87 GNQNDWTQAHTF------NDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRID--QAHPVGVTSVSWA 158 (302)
Q Consensus 87 ~~~~~~~~~~~~------~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~ 158 (302)
.+.. ......- ......|.++...++ +..|-.|+.++-+.+|+..+. .+...... ......|.++...
T Consensus 385 ~~~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~--g~~lWigt~~~Gl~~~d~~~~-~~~~~~~~~~~l~~~~v~~i~~d 460 (795)
T 4a2l_A 385 ITQR-FTSYTLQEDESARGIGSNNIKAVYVDEK--KSLVYIGTHAGGLSILHRNSG-QVENFNQRNSQLVNENVYAILPD 460 (795)
T ss_dssp TTCC-EEEECCC------CCSCSCEEEEEEETT--TTEEEEEETTTEEEEEETTTC-CEEEECTTTSCCSCSCEEEEEEC
T ss_pred CCCc-EEEEecCCCCcccCCCCccEEEEEEcCC--CCEEEEEeCcCceeEEeCCCC-cEEEeecCCCCcCCCeeEEEEEC
Confidence 5432 1111100 012356888877654 543556677677888876532 22111100 0112345665544
Q ss_pred CCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcccccccccc----ccCCCceeEEEeeCCCCCCccEEEEEecC
Q 022111 159 PAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPAL----QMHSDWVRSVAWAPNLGLPKSTIASASQD 234 (302)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~----~~h~~~v~~v~~~p~~~~~~~~l~s~s~D 234 (302)
+. +. |-.|+. +-+.+||..++... .+... ......|.++...+++ . |-.|+.
T Consensus 461 ~~--------------g~-lwigt~-~Gl~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~i~~d~~g----~-lWigt~- 516 (795)
T 4a2l_A 461 GE--------------GN-LWLGTL-SALVRFNPEQRSFT--TIEKEKDGTPVVSKQITTLFRDSHK----R-LWIGGE- 516 (795)
T ss_dssp SS--------------SC-EEEEES-SCEEEEETTTTEEE--ECCBCTTCCBCCCCCEEEEEECTTC----C-EEEEES-
T ss_pred CC--------------CC-EEEEec-CceeEEeCCCCeEE--EccccccccccCCceEEEEEECCCC----C-EEEEeC-
Confidence 32 23 444444 44888887654321 11111 1134678999888774 3 333444
Q ss_pred CeEEEEEeccCCcceeeeee------ccCCCcEEEEEEccCCCEEEEecCCceEEeeecCCceEEEe
Q 022111 235 GTVVIWTCAKEGEQWEGRVL------KDFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVDGEWQQV 295 (302)
Q Consensus 235 ~~i~iwd~~~~~~~~~~~~~------~~~~~~v~~~~~spdg~~la~~~~d~i~~w~~~~~~~~~~~ 295 (302)
+.|..||..... . ... .-....|.++...++|++.+... +++..|+.. .+.+...
T Consensus 517 ~Gl~~~~~~~~~--~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~Gl~~~d~~-~~~~~~~ 577 (795)
T 4a2l_A 517 EGLSVFKQEGLD--I--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-EGFYCFNEK-DKQIKRY 577 (795)
T ss_dssp SCEEEEEEETTE--E--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-SCEEEEETT-TTEEEEE
T ss_pred CceEEEeCCCCe--E--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-CCceeECCC-CCcEEEe
Confidence 457888876431 1 111 01234689999999998776664 488888853 3444443
No 260
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.87 E-value=0.07 Score=50.24 Aligned_cols=55 Identities=18% Similarity=0.276 Sum_probs=35.7
Q ss_pred cCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCce
Q 022111 233 QDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGE 291 (302)
Q Consensus 233 ~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~ 291 (302)
.++.|..||+.+.+..|.... ..+.+...+...|.+|.+++.+ .++.||......
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~----~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPY----PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEA 491 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEE----SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ccceEEEEeCCCCcEEEEccC----CCCCcCceeEeCCCEEEEECCcccchhhhhhcChh
Confidence 358899999877655554332 2234444555667777778777 699999765444
No 261
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.69 E-value=0.27 Score=42.76 Aligned_cols=220 Identities=8% Similarity=-0.057 Sum_probs=114.5
Q ss_pred CCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEe
Q 022111 31 SDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAW 110 (302)
Q Consensus 31 ~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~ 110 (302)
....|+..++....... .+.+ ......++|.+. .+.++.+-...+.|..+++..... ...+.........+++
T Consensus 94 ~~~~I~~i~~~~~~~~~--~~~~-~~~~~gl~~d~~-~~~ly~~D~~~~~I~r~~~~g~~~---~~~~~~~~~~p~glav 166 (386)
T 3v65_B 94 NRIDIRQVLPHRSEYTL--LLNN-LENAIALDFHHR-RELVFWSDVTLDRILRANLNGSNV---EEVVSTGLESPGGLAV 166 (386)
T ss_dssp CBSCEEEECTTSCCCEE--EECS-CSCEEEEEEETT-TTEEEEEETTTTEEEEEETTSCCE---EEEECSSCSCCCCEEE
T ss_pred cCccceeeccCCCcEEE--EecC-CCccEEEEEecC-CCeEEEEeCCCCcEEEEecCCCCc---EEEEeCCCCCccEEEE
Confidence 34567777775433222 2222 334678999754 356666766788898888765421 1112222334567777
Q ss_pred cCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCC-CcEEE
Q 022111 111 APHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD-NTVKV 189 (302)
Q Consensus 111 ~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D-~~v~i 189 (302)
.+.. +.+..+-...+.|.+.+.... .....+. ........++..|.. +.++++-... +.|..
T Consensus 167 d~~~-g~lY~~d~~~~~I~~~~~dg~--~~~~l~~-~~l~~P~giavdp~~-------------g~ly~td~~~~~~I~r 229 (386)
T 3v65_B 167 DWVH-DKLYWTDSGTSRIEVANLDGA--HRKVLLW-QSLEKPRAIALHPME-------------GTIYWTDWGNTPRIEA 229 (386)
T ss_dssp ETTT-TEEEEEETTTTEEEECBTTSC--SCEEEEC-SSCSCEEEEEEETTT-------------TEEEEEECSSSCEEEE
T ss_pred EeCC-CeEEEEcCCCCeEEEEeCCCC--ceEEeec-CCCCCCcEEEEEcCC-------------CeEEEeccCCCCEEEE
Confidence 7653 444455455566766654321 1111111 122234566666542 3455554444 66777
Q ss_pred EEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccC
Q 022111 190 WKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLT 269 (302)
Q Consensus 190 wd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spd 269 (302)
+++..... ..+ ....-.+-+.|+++|++ +...++=+..+.|..+|+..... ..+.........++++ ..
T Consensus 230 ~~~dG~~~--~~~--~~~~~~~PnGlavd~~~---~~lY~aD~~~~~I~~~d~dG~~~---~~~~~~~~~~P~giav-~~ 298 (386)
T 3v65_B 230 SSMDGSGR--RII--ADTHLFWPNGLTIDYAG---RRMYWVDAKHHVIERANLDGSHR---KAVISQGLPHPFAITV-FE 298 (386)
T ss_dssp EETTSCSC--EEE--ECSSCSCEEEEEEEGGG---TEEEEEETTTTEEEEECTTSCSC---EEEECSSCSSEEEEEE-ET
T ss_pred EeCCCCCc--EEE--EECCCCCeeeEEEeCCC---CEEEEEECCCCEEEEEeCCCCee---EEEEECCCCCceEEEE-EC
Confidence 77654211 111 11123346889999874 35666666778888888764321 1222222234567777 33
Q ss_pred CCEEEEecCC-ceEEee
Q 022111 270 GNLLAVADAN-NVTLWK 285 (302)
Q Consensus 270 g~~la~~~~d-~i~~w~ 285 (302)
+.++.+.... .|..++
T Consensus 299 ~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 299 DSLYWTDWHTKSINSAN 315 (386)
T ss_dssp TEEEEEETTTTEEEEEE
T ss_pred CEEEEeeCCCCeEEEEE
Confidence 4443333333 566665
No 262
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.66 E-value=0.2 Score=40.67 Aligned_cols=189 Identities=8% Similarity=-0.041 Sum_probs=99.7
Q ss_pred Ccc--cCeEEEEeeCCCCCCEEEEEeCC--CeEEEEEcCCCCceeEEEEecCCCCC-eeEEEecCCCCCcEEEEEecCCc
Q 022111 53 GHR--GPVWQVAWAHPKFGSILASCSYD--GQVIIWKEGNQNDWTQAHTFNDHKSS-VNSIAWAPHELGLSLACGSSDGN 127 (302)
Q Consensus 53 ~h~--~~v~~v~~~~~~~~~~l~s~s~D--~~i~iwd~~~~~~~~~~~~~~~h~~~-i~~l~~~pd~~~~~l~sg~~d~~ 127 (302)
.|. +....+.|.. +.++.|.+.+ ..|+.+|+.++.. ...+...... --.+++.. +.+......++.
T Consensus 16 phd~~~ftqGL~~~~---~~LyestG~~g~S~v~~vD~~tgkv---~~~~~l~~~~fgeGi~~~~---~~ly~ltw~~~~ 86 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR---GHLYESTGETGRSSVRKVDLETGRI---LQRAEVPPPYFGAGIVAWR---DRLIQLTWRNHE 86 (243)
T ss_dssp ECCTTCCEEEEEEET---TEEEEEECCTTSCEEEEEETTTCCE---EEEEECCTTCCEEEEEEET---TEEEEEESSSSE
T ss_pred CCCCccccccEEEEC---CEEEEECCCCCCceEEEEECCCCCE---EEEEeCCCCcceeEEEEeC---CEEEEEEeeCCE
Confidence 454 3456899963 5677777765 4899999987643 3333222211 12334432 234444556788
Q ss_pred EEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccc-
Q 022111 128 ISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQ- 206 (302)
Q Consensus 128 v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~- 206 (302)
+.+||..+.... ..+... ... ..+++ +++.|+.+-.++.|.++|..+... ..++.
T Consensus 87 v~v~D~~tl~~~--~ti~~~-~~G-wglt~----------------dg~~L~vSdgs~~l~~iDp~t~~~----~~~I~V 142 (243)
T 3mbr_X 87 GFVYDLATLTPR--ARFRYP-GEG-WALTS----------------DDSHLYMSDGTAVIRKLDPDTLQQ----VGSIKV 142 (243)
T ss_dssp EEEEETTTTEEE--EEEECS-SCC-CEEEE----------------CSSCEEEECSSSEEEEECTTTCCE----EEEEEC
T ss_pred EEEEECCcCcEE--EEEeCC-CCc-eEEee----------------CCCEEEEECCCCeEEEEeCCCCeE----EEEEEE
Confidence 999987643211 222111 111 12222 234444444478899999766421 11111
Q ss_pred -cCC---CceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeee---eec-------cCCCcEEEEEEccCCCE
Q 022111 207 -MHS---DWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGR---VLK-------DFKTPVWSVSWSLTGNL 272 (302)
Q Consensus 207 -~h~---~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~---~~~-------~~~~~v~~~~~spdg~~ 272 (302)
.+. ..++.+.|. + +...+..-.+..|.+.|.++..-.-.-. +.. ........|||+|+++.
T Consensus 143 ~~~g~~~~~lNeLe~~-~----G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~ 217 (243)
T 3mbr_X 143 TAGGRPLDNLNELEWV-N----GELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDR 217 (243)
T ss_dssp EETTEECCCEEEEEEE-T----TEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTE
T ss_pred ccCCcccccceeeEEe-C----CEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCE
Confidence 111 235666665 3 2555555567788888876542110000 000 11235789999998877
Q ss_pred EEEecCC
Q 022111 273 LAVADAN 279 (302)
Q Consensus 273 la~~~~d 279 (302)
|-+++..
T Consensus 218 lfVTGK~ 224 (243)
T 3mbr_X 218 LFVTGKR 224 (243)
T ss_dssp EEEEETT
T ss_pred EEEECCC
Confidence 7666554
No 263
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.60 E-value=0.53 Score=44.94 Aligned_cols=239 Identities=14% Similarity=0.080 Sum_probs=128.0
Q ss_pred cccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEe-------cCcccCeEEEEeeCCCCCCEEEEEeCCCeEE
Q 022111 10 HEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATL-------KGHRGPVWQVAWAHPKFGSILASCSYDGQVI 82 (302)
Q Consensus 10 h~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~-------~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~ 82 (302)
....|.++..+.+|.+. .|..++-|..++............ ......|.++.... +|.+ -.|..++-+.
T Consensus 311 ~~~~v~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~--~g~l-Wigt~~~Gl~ 386 (781)
T 3v9f_A 311 SNASARYIFQDSFNNIW-IGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDG--QGKL-WIGTDGGGIN 386 (781)
T ss_dssp SSSCEEEEEECSSCCEE-EEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECT--TSCE-EEEEBSSCEE
T ss_pred CCCeEEEEEEeCCCCEE-EEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcC--CCCE-EEEeCCCcEE
Confidence 34578999989888654 466677788887654332222110 01235688887643 3554 4556556677
Q ss_pred EEEcCCCCceeEEEEe----cCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeC
Q 022111 83 IWKEGNQNDWTQAHTF----NDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWA 158 (302)
Q Consensus 83 iwd~~~~~~~~~~~~~----~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 158 (302)
.|+..+. ....+ ......|.++...++ +. |-.|+.++-+..++..+. .+............|.++...
T Consensus 387 ~~~~~~~----~~~~~~~~~~~~~~~v~~i~~d~~--g~-lWigt~~~Gl~~~~~~~~-~~~~~~~~~~~~~~v~~i~~d 458 (781)
T 3v9f_A 387 VFENGKR----VAIYNKENRELLSNSVLCSLKDSE--GN-LWFGTYLGNISYYNTRLK-KFQIIELEKNELLDVRVFYED 458 (781)
T ss_dssp EEETTEE----EEECC-----CCCSBEEEEEECTT--SC-EEEEETTEEEEEECSSSC-EEEECCSTTTCCCCEEEEEEC
T ss_pred EEECCCC----eEEEccCCCCCCCcceEEEEECCC--CC-EEEEeccCCEEEEcCCCC-cEEEeccCCCCCCeEEEEEEC
Confidence 8876432 11111 123466888877554 44 444666666777764322 121111000122345665544
Q ss_pred CCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcccccccccc---ccCCCceeEEEeeCCCCCCccEEEEEecCC
Q 022111 159 PAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPAL---QMHSDWVRSVAWAPNLGLPKSTIASASQDG 235 (302)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~ 235 (302)
++ + .|-.|+. +-|.++|..++.+.. +... ......|.++...+++ . |-.|+.++
T Consensus 459 ~~--------------g-~lwigt~-~Gl~~~~~~~~~~~~--~~~~~~~~~~~~~i~~i~~d~~g----~-lWigt~~~ 515 (781)
T 3v9f_A 459 KN--------------K-KIWIGTH-AGVFVIDLASKKVIH--HYDTSNSQLLENFVRSIAQDSEG----R-FWIGTFGG 515 (781)
T ss_dssp TT--------------S-EEEEEET-TEEEEEESSSSSCCE--EECTTTSSCSCSCEEEEEECTTC----C-EEEEESSS
T ss_pred CC--------------C-CEEEEEC-CceEEEeCCCCeEEe--cccCcccccccceeEEEEEcCCC----C-EEEEEcCC
Confidence 32 2 3444454 458888876543211 1111 1124678999887764 3 44555544
Q ss_pred eEEEEEeccCCcceeeeeec--cC-CCcEEEEEEccCCCEEEEecCCce-EEeeec
Q 022111 236 TVVIWTCAKEGEQWEGRVLK--DF-KTPVWSVSWSLTGNLLAVADANNV-TLWKEA 287 (302)
Q Consensus 236 ~i~iwd~~~~~~~~~~~~~~--~~-~~~v~~~~~spdg~~la~~~~d~i-~~w~~~ 287 (302)
.|..+|.+... .. .... +. ...|.++...++|++.++.. +++ ..|+..
T Consensus 516 Gl~~~~~~~~~--~~-~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~ 567 (781)
T 3v9f_A 516 GVGIYTPDMQL--VR-KFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSAR 567 (781)
T ss_dssp CEEEECTTCCE--EE-EECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTT
T ss_pred CEEEEeCCCCe--EE-EccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCC
Confidence 46677764321 11 1111 11 34688999888998776664 677 778753
No 264
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.49 E-value=0.27 Score=40.21 Aligned_cols=206 Identities=7% Similarity=0.036 Sum_probs=109.9
Q ss_pred ccccceeEEEEccCCCEEEE-eeCCCcEEEEeecCCCceEEEEe--cCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 9 GHEDTVHDVAMDFYGKRLAT-ASSDSSIKIIGLSNSASQHLATL--KGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 9 ~h~~~v~~~~~s~~~~~l~s-~~~d~~v~lw~~~~~~~~~~~~~--~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
|-.+.+..++++|+++.|++ ...++.|...|.. ++.+..+ .+. ...-.|++..+ +.++++.-.++.+.+++
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~---g~v~~~i~l~g~-~D~EGIa~~~~--g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN---GDLIRTIPLDFV-KDLETIEYIGD--NQFVISDERDYAIYVIS 97 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT---CCEEEEEECSSC-SSEEEEEECST--TEEEEEETTTTEEEEEE
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC---CCEEEEEecCCC-CChHHeEEeCC--CEEEEEECCCCcEEEEE
Confidence 44567999999998766655 5556666666665 2333333 332 34667887643 56656655677888888
Q ss_pred cCCCCceeEEEEe--c----CCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecC--CC-Ceeeeee----cccCCCCe
Q 022111 86 EGNQNDWTQAHTF--N----DHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA--DG-GWDTTRI----DQAHPVGV 152 (302)
Q Consensus 86 ~~~~~~~~~~~~~--~----~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~--~~-~~~~~~~----~~~h~~~v 152 (302)
+............ . ..+.-...|+|.|. +..|.++.......+|.... .. ....... ...+....
T Consensus 98 v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~--~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~ 175 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQ--DHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDV 175 (255)
T ss_dssp ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETT--TTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCC
T ss_pred cCCCCeeeeeeeeccccccccccCCcceEEEeCC--CCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCc
Confidence 7554321112222 1 13445689999997 33455555544555665531 11 1111100 01123345
Q ss_pred EEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcccc-cccccccc---CCCceeEEEeeCCCCCCccEE
Q 022111 153 TSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKM-DCFPALQM---HSDWVRSVAWAPNLGLPKSTI 228 (302)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~-~~~~~~~~---h~~~v~~v~~~p~~~~~~~~l 228 (302)
.++++.|.. +.+++.....+.+-++|........ .....+.+ --..-..|+|.|++ +..
T Consensus 176 S~l~~dp~t-------------g~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G----~ly 238 (255)
T 3qqz_A 176 SGAEFNQQK-------------NTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASG----NIY 238 (255)
T ss_dssp CEEEEETTT-------------TEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTC----CEE
T ss_pred eeEEEcCCC-------------CeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCC----CEE
Confidence 677777753 4566666667777777755331111 00011111 11245789999986 444
Q ss_pred EEEecCCeEEEE
Q 022111 229 ASASQDGTVVIW 240 (302)
Q Consensus 229 ~s~s~D~~i~iw 240 (302)
++ |+-.-+..|
T Consensus 239 Iv-sE~n~~y~f 249 (255)
T 3qqz_A 239 IV-SEPNRFYRF 249 (255)
T ss_dssp EE-ETTTEEEEE
T ss_pred EE-cCCceEEEE
Confidence 44 555544444
No 265
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.48 E-value=0.42 Score=42.35 Aligned_cols=202 Identities=9% Similarity=0.053 Sum_probs=99.8
Q ss_pred eeEEEEccC--CCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCC---Ce-EEEEEcC
Q 022111 14 VHDVAMDFY--GKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYD---GQ-VIIWKEG 87 (302)
Q Consensus 14 v~~~~~s~~--~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D---~~-i~iwd~~ 87 (302)
...++++++ ...|..+...+.|+.++.... . +..+.........|++.++ |+++++.... .. +...+..
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g--~-v~~~~~~~~~P~giavd~d--G~lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQ--Y-VDIKTTNIGQCADVNFTLN--GDMVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTT--E-EEEECCCCSCEEEEEECTT--CCEEEEECCSCTTSEEEEEECGG
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCC--E-EEEeecCCCCccEEEECCC--CCEEEEcCCCCcccceEEEEECC
Confidence 457889984 334554444478888887443 2 3333333445778999754 6765554421 22 2222222
Q ss_pred CCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCcee
Q 022111 88 NQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALV 167 (302)
Q Consensus 88 ~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 167 (302)
.. ......+. .......+++.|+. +.+.++-..++.|+.++... +..............-..++++|++
T Consensus 216 ~~--~~~~~~~~-~~~~P~giavd~~~-G~lyv~d~~~~~V~~~d~~~-g~~~~~~~~~~~~~~~~~ia~dpdG------ 284 (433)
T 4hw6_A 216 SG--FTERLSLC-NARGAKTCAVHPQN-GKIYYTRYHHAMISSYDPAT-GTLTEEEVMMDTKGSNFHIVWHPTG------ 284 (433)
T ss_dssp GT--TCCEEEEE-ECSSBCCCEECTTT-CCEEECBTTCSEEEEECTTT-CCEEEEEEECSCCSSCEEEEECTTS------
T ss_pred CC--eecccccc-ccCCCCEEEEeCCC-CeEEEEECCCCEEEEEECCC-CeEEEEEeccCCCCCcccEEEeCCC------
Confidence 11 11001111 12334667788842 54444544556777776542 2220111111111122357777753
Q ss_pred ecccCCCceeEEEeeCCCcEEEEEEecCccccccccccc------cC---------CCceeEEEe---------eCCCCC
Q 022111 168 GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQ------MH---------SDWVRSVAW---------APNLGL 223 (302)
Q Consensus 168 ~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~------~h---------~~~v~~v~~---------~p~~~~ 223 (302)
..++++-...+.|+.++.......+.....+. +. -..-..+++ .++
T Consensus 285 -------~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~--- 354 (433)
T 4hw6_A 285 -------DWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDE--- 354 (433)
T ss_dssp -------SEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCC---
T ss_pred -------CEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCC---
Confidence 13566666677888887652110000000110 11 122456888 443
Q ss_pred CccEEEEEecCCeEEEEEe
Q 022111 224 PKSTIASASQDGTVVIWTC 242 (302)
Q Consensus 224 ~~~~l~s~s~D~~i~iwd~ 242 (302)
++..++-...+.|+.++.
T Consensus 355 -g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 355 -YDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp -EEEEEEETTTTEEEEECT
T ss_pred -CcEEEEECCCCEEEEECC
Confidence 366777677788888874
No 266
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.40 E-value=0.4 Score=41.17 Aligned_cols=76 Identities=20% Similarity=0.220 Sum_probs=42.3
Q ss_pred ceeEEEeeCCCC---CCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCCceEEeee
Q 022111 211 WVRSVAWAPNLG---LPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANNVTLWKE 286 (302)
Q Consensus 211 ~v~~v~~~p~~~---~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d~i~~w~~ 286 (302)
....+.|.+... +.+..+++.-..+.|...++..........++......+..+++.|||.++++.+...=+||++
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I~ri 350 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGELLKV 350 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEEEEE
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEEEEE
Confidence 456677754211 2245666665677777777653211111122223335788999999999777655333355554
No 267
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.31 E-value=0.45 Score=40.83 Aligned_cols=104 Identities=15% Similarity=0.078 Sum_probs=56.8
Q ss_pred ceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEec---CcccCeEEEEeeCCC--CCCEEEEEeCC-----CeEE
Q 022111 13 TVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLK---GHRGPVWQVAWAHPK--FGSILASCSYD-----GQVI 82 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~---~h~~~v~~v~~~~~~--~~~~l~s~s~D-----~~i~ 82 (302)
.-..++|.|+|++++ +..++.|++++ . .....+..+. ........|+|.++- .+.+.++-... ..|.
T Consensus 32 ~P~~ia~~pdG~l~V-~e~~g~I~~i~-~-g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLI-AERPGRIRLFR-E-GRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEE-EETTTEEEEEE-T-TEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEE-EeCCCeEEEEE-C-CCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 356799999998555 46679898887 3 2223333221 123456789997530 24455554433 5677
Q ss_pred EEEcCCCCc--ee-EEEEec---CCCCCeeEEEecCCCCCcEEEE
Q 022111 83 IWKEGNQND--WT-QAHTFN---DHKSSVNSIAWAPHELGLSLAC 121 (302)
Q Consensus 83 iwd~~~~~~--~~-~~~~~~---~h~~~i~~l~~~pd~~~~~l~s 121 (302)
.++...... .+ ....+. ........++|.|| |.+.++
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pd--G~Lyv~ 151 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPD--GMLYVT 151 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTT--SCEEEE
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCC--CCEEEE
Confidence 777653211 01 112232 11233478999998 544444
No 268
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.24 E-value=0.87 Score=43.44 Aligned_cols=249 Identities=12% Similarity=-0.005 Sum_probs=129.5
Q ss_pred ccceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEE-------e-----cCcccCeEEEEeeCCCCCCEEEEEeCC
Q 022111 11 EDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLAT-------L-----KGHRGPVWQVAWAHPKFGSILASCSYD 78 (302)
Q Consensus 11 ~~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~-------~-----~~h~~~v~~v~~~~~~~~~~l~s~s~D 78 (302)
...|.++..+.+|.+. .|...+-|.+++........... . ......|.++.... .|.+ -.|..+
T Consensus 257 ~~~i~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~--~g~l-Wigt~~ 332 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLW-IATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDS--FNNI-WIGTWG 332 (781)
T ss_dssp CCCEEEEEECTTSEEE-EEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECS--SCCE-EEEEBS
T ss_pred CceEEEEEECCCCCEE-EEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeC--CCCE-EEEecC
Confidence 3468888888888644 45664567888765432221111 0 11345688887643 3554 456666
Q ss_pred CeEEEEEcCCCCceeEEEE-------ecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeee-cccCCC
Q 022111 79 GQVIIWKEGNQNDWTQAHT-------FNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRI-DQAHPV 150 (302)
Q Consensus 79 ~~i~iwd~~~~~~~~~~~~-------~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~-~~~h~~ 150 (302)
+-|..++..... ...... .......|.++...++ +. |-.|+.++-+..|+.... .+..... ......
T Consensus 333 ~Gl~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~v~~i~~d~~--g~-lWigt~~~Gl~~~~~~~~-~~~~~~~~~~~~~~ 407 (781)
T 3v9f_A 333 GGINFISNAPPT-FHTWSYSPTQMNESSLSNKVVSSVCDDGQ--GK-LWIGTDGGGINVFENGKR-VAIYNKENRELLSN 407 (781)
T ss_dssp SCEEEECSSCCS-CEEEC----CCCSSCCSSSCEEEEEECTT--SC-EEEEEBSSCEEEEETTEE-EEECC-----CCCS
T ss_pred CeEEEeCCCCCc-ceeeccCccccccCCCCCcceEEEEEcCC--CC-EEEEeCCCcEEEEECCCC-eEEEccCCCCCCCc
Confidence 678888765432 111110 0112356888877654 44 445565666777765321 1110000 001123
Q ss_pred CeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEE
Q 022111 151 GVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIAS 230 (302)
Q Consensus 151 ~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s 230 (302)
.|.++...+. ..|-.|+.++-+..+|..++... .+.........|.++...+++ . |-.
T Consensus 408 ~v~~i~~d~~---------------g~lWigt~~~Gl~~~~~~~~~~~--~~~~~~~~~~~v~~i~~d~~g----~-lwi 465 (781)
T 3v9f_A 408 SVLCSLKDSE---------------GNLWFGTYLGNISYYNTRLKKFQ--IIELEKNELLDVRVFYEDKNK----K-IWI 465 (781)
T ss_dssp BEEEEEECTT---------------SCEEEEETTEEEEEECSSSCEEE--ECCSTTTCCCCEEEEEECTTS----E-EEE
T ss_pred ceEEEEECCC---------------CCEEEEeccCCEEEEcCCCCcEE--EeccCCCCCCeEEEEEECCCC----C-EEE
Confidence 3555544322 34555666666888887654221 111101234678998877764 3 444
Q ss_pred EecCCeEEEEEeccCCcceeeeee-c---cCCCcEEEEEEccCCCEEEEecCCceEEeeecCCceEEE
Q 022111 231 ASQDGTVVIWTCAKEGEQWEGRVL-K---DFKTPVWSVSWSLTGNLLAVADANNVTLWKEAVDGEWQQ 294 (302)
Q Consensus 231 ~s~D~~i~iwd~~~~~~~~~~~~~-~---~~~~~v~~~~~spdg~~la~~~~d~i~~w~~~~~~~~~~ 294 (302)
|+. +.|..+|..... +..... . .....|.++...++|++.+....+++..++.. .+.+..
T Consensus 466 gt~-~Gl~~~~~~~~~--~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~-~~~~~~ 529 (781)
T 3v9f_A 466 GTH-AGVFVIDLASKK--VIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPD-MQLVRK 529 (781)
T ss_dssp EET-TEEEEEESSSSS--CCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTT-CCEEEE
T ss_pred EEC-CceEEEeCCCCe--EEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCC-CCeEEE
Confidence 555 568888876432 111110 1 11356899999999988766654678888753 234443
No 269
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.20 E-value=0.61 Score=41.28 Aligned_cols=159 Identities=8% Similarity=0.092 Sum_probs=78.5
Q ss_pred eEEEEeeCC-CCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCC--cEEEEEec
Q 022111 58 VWQVAWAHP-KFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDG--NISVFTAT 134 (302)
Q Consensus 58 v~~v~~~~~-~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~--~v~~~~~~ 134 (302)
-..|+|.++ ..+.++++-.. +.|+.+|+.++ .+..+.........+++.++ +.++++..... .-.++...
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g----~v~~~~~~~~~P~giavd~d--G~lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQ----YVDIKTTNIGQCADVNFTLN--GDMVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT-SCEEEEETTTT----EEEEECCCCSCEEEEEECTT--CCEEEEECCSCTTSEEEEEEC
T ss_pred CceEEEccccCCCEEEEEeCC-CCEEEEECCCC----EEEEeecCCCCccEEEECCC--CCEEEEcCCCCcccceEEEEE
Confidence 346788652 23555544333 78888887654 23334444556889999988 44444432110 11122111
Q ss_pred CCCCeee-eeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCcee
Q 022111 135 ADGGWDT-TRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVR 213 (302)
Q Consensus 135 ~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~ 213 (302)
..+.+.. ..+ ........+++.|. ++.++++-..++.|+.+|..++..... +... +....-.
T Consensus 214 ~~~~~~~~~~~--~~~~~P~giavd~~-------------~G~lyv~d~~~~~V~~~d~~~g~~~~~-~~~~-~~~~~~~ 276 (433)
T 4hw6_A 214 RASGFTERLSL--CNARGAKTCAVHPQ-------------NGKIYYTRYHHAMISSYDPATGTLTEE-EVMM-DTKGSNF 276 (433)
T ss_dssp GGGTTCCEEEE--EECSSBCCCEECTT-------------TCCEEECBTTCSEEEEECTTTCCEEEE-EEEC-SCCSSCE
T ss_pred CCCCeeccccc--cccCCCCEEEEeCC-------------CCeEEEEECCCCEEEEEECCCCeEEEE-Eecc-CCCCCcc
Confidence 1111110 000 00011122333331 235555655677788888764421001 1111 1122335
Q ss_pred EEEeeCCCCCCccEEEEEecCCeEEEEEec
Q 022111 214 SVAWAPNLGLPKSTIASASQDGTVVIWTCA 243 (302)
Q Consensus 214 ~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~ 243 (302)
.|+|+|++ ....++-...+.|+.++..
T Consensus 277 ~ia~dpdG---~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 277 HIVWHPTG---DWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEEECTTS---SEEEEEETTTTEEEEEEBC
T ss_pred cEEEeCCC---CEEEEEeCCCCEEEEEeCC
Confidence 69999996 2356666778889988865
No 270
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.01 E-value=0.93 Score=41.71 Aligned_cols=74 Identities=14% Similarity=0.166 Sum_probs=47.6
Q ss_pred eeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcce------eeeee--ccCCCcEEEEEEccCCCEEEEecCC-ceE
Q 022111 212 VRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQW------EGRVL--KDFKTPVWSVSWSLTGNLLAVADAN-NVT 282 (302)
Q Consensus 212 v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~------~~~~~--~~~~~~v~~~~~spdg~~la~~~~d-~i~ 282 (302)
..++.++||+ ...++++..+.+|.++|+.+..... ..... .......+.++|+|+|...++..-+ .|.
T Consensus 279 PhGv~~sPDG---k~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~ 355 (595)
T 1fwx_A 279 PHGCNMAPDK---KHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVV 355 (595)
T ss_dssp CCCEEECTTS---SEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEE
T ss_pred ceEEEEcCCC---CEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEE
Confidence 4579999997 2456666678899999998531000 00011 1223458889999999444444445 699
Q ss_pred EeeecC
Q 022111 283 LWKEAV 288 (302)
Q Consensus 283 ~w~~~~ 288 (302)
.|+.+.
T Consensus 356 kwdi~~ 361 (595)
T 1fwx_A 356 KWNIED 361 (595)
T ss_dssp EEEHHH
T ss_pred EEEhhH
Confidence 999754
No 271
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.99 E-value=0.65 Score=39.73 Aligned_cols=234 Identities=9% Similarity=-0.061 Sum_probs=121.8
Q ss_pred eeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCcee
Q 022111 14 VHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWT 93 (302)
Q Consensus 14 v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~ 93 (302)
.++....+++ +|+- +....|+..++...... ..+.+ ......++|.+. .+.++.+-...+.|..+++..... .
T Consensus 36 ~~C~~~~~~~-~ll~-~~~~~I~~i~~~g~~~~--~~~~~-~~~~~~l~~d~~-~~~ly~~D~~~~~I~r~~~~g~~~-~ 108 (349)
T 3v64_C 36 RSCKALGPEP-VLLF-ANRIDIRQVLPHRSEYT--LLLNN-LENAIALDFHHR-RELVFWSDVTLDRILRANLNGSNV-E 108 (349)
T ss_dssp SCEEESSSCC-EEEE-ECBSCEEEECTTSCCEE--EEECS-CSCEEEEEEETT-TTEEEEEETTTTEEEEEETTSCSC-E
T ss_pred CcccccccCc-eeEe-ecccceEEEeCCCCeeE--EeecC-CCceEEEEEecc-ccEEEEEeccCCceEEEecCCCCc-e
Confidence 3444444433 3332 23455777776543222 22222 234678999754 356666766788888888765431 1
Q ss_pred EEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCC
Q 022111 94 QAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLD 173 (302)
Q Consensus 94 ~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~ 173 (302)
..+.........+++.+.. +.+..+-...+.|.+.+.... .....+. ........++..|..
T Consensus 109 --~~~~~~~~~p~glavd~~~-g~ly~~d~~~~~I~~~~~dG~--~~~~l~~-~~l~~P~~iavdp~~------------ 170 (349)
T 3v64_C 109 --EVVSTGLESPGGLAVDWVH-DKLYWTDSGTSRIEVANLDGA--HRKVLLW-QSLEKPRAIALHPME------------ 170 (349)
T ss_dssp --EEECSSCSCCCEEEEETTT-TEEEEEETTTTEEEEEETTSC--SCEEEEC-TTCSCEEEEEEETTT------------
T ss_pred --EEEeCCCCCccEEEEecCC-CeEEEEcCCCCeEEEEcCCCC--ceEEEEe-CCCCCcceEEEecCc------------
Confidence 1122223445778887653 444555555677877775422 1111111 222334667766643
Q ss_pred CceeEEEeeCC-CcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeee
Q 022111 174 PVQKLASCGCD-NTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGR 252 (302)
Q Consensus 174 ~~~~l~s~~~D-~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~ 252 (302)
+..+++-... +.|..+++..... ..+ ....-.+-+.|+++|++ +...++=+..+.|..+|++.... ..
T Consensus 171 -g~ly~td~~~~~~I~r~~~dG~~~--~~~--~~~~~~~PnGla~d~~~---~~lY~aD~~~~~I~~~~~dG~~~---~~ 239 (349)
T 3v64_C 171 -GTIYWTDWGNTPRIEASSMDGSGR--RII--ADTHLFWPNGLTIDYAG---RRMYWVDAKHHVIERANLDGSHR---KA 239 (349)
T ss_dssp -TEEEEEECSSSCEEEEEETTSCSC--EES--CCSSCSCEEEEEEETTT---TEEEEEETTTTEEEEEETTSCSC---EE
T ss_pred -CeEEEeccCCCCEEEEEeCCCCCc--EEE--EECCCCCcceEEEeCCC---CEEEEEECCCCEEEEEeCCCCce---EE
Confidence 3455555544 6777777654311 111 11123356889999875 35666666778899988764321 12
Q ss_pred eeccCCCcEEEEEEccCCCEEEEecCC--ceEEee
Q 022111 253 VLKDFKTPVWSVSWSLTGNLLAVADAN--NVTLWK 285 (302)
Q Consensus 253 ~~~~~~~~v~~~~~spdg~~la~~~~d--~i~~w~ 285 (302)
+....-....++++ .++ .|..++.. .|...+
T Consensus 240 ~~~~~~~~P~giav-~~~-~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 240 VISQGLPHPFAITV-FED-SLYWTDWHTKSINSAN 272 (349)
T ss_dssp EECSSCSSEEEEEE-ETT-EEEEEETTTTEEEEEE
T ss_pred EEeCCCCCceEEEE-ECC-EEEEecCCCCeEEEEE
Confidence 22222234567777 333 33334333 465554
No 272
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.77 E-value=0.73 Score=38.58 Aligned_cols=114 Identities=11% Similarity=0.122 Sum_probs=61.7
Q ss_pred ceeEEEEcc-CCCEEEEeeCCCcEEEEeecCCCceEEEE-ecCc-ccCeEEEEeeCCCCCCEEEEEeC------------
Q 022111 13 TVHDVAMDF-YGKRLATASSDSSIKIIGLSNSASQHLAT-LKGH-RGPVWQVAWAHPKFGSILASCSY------------ 77 (302)
Q Consensus 13 ~v~~~~~s~-~~~~l~s~~~d~~v~lw~~~~~~~~~~~~-~~~h-~~~v~~v~~~~~~~~~~l~s~s~------------ 77 (302)
.+..+++++ +++ |..+...+.+..++......+.+.. ..+. ......+++.+. +|++.++-..
T Consensus 81 ~p~gi~~~~~~g~-l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~-~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 81 RTYDISYNLQNNQ-LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQR-TGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp CEEEEEEETTTTE-EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTT-TCCEEEEESCSSCCTTCHHHHH
T ss_pred CCceEEEcCCCCc-EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecC-CCEEEEECCcccccccccceeh
Confidence 467888987 565 4445555557777754321122211 1111 123567887641 3777666432
Q ss_pred -----CCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEE-EEecCCcEEEEEec
Q 022111 78 -----DGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLA-CGSSDGNISVFTAT 134 (302)
Q Consensus 78 -----D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~-sg~~d~~v~~~~~~ 134 (302)
++.|..+|..+.. ...+.........++|+|+ +..|. +-...+.|..|+..
T Consensus 159 ~~~~~~g~v~~~d~~~~~----~~~~~~~~~~p~gia~~~d--g~~lyv~d~~~~~I~~~~~~ 215 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKE----TTLLLKELHVPGGAEVSAD--SSFVLVAEFLSHQIVKYWLE 215 (322)
T ss_dssp HHTCCCEEEEEEETTTTE----EEEEEEEESCCCEEEECTT--SSEEEEEEGGGTEEEEEESS
T ss_pred cccCCCceEEEEeCCCCE----EEEeccCCccCcceEECCC--CCEEEEEeCCCCeEEEEECC
Confidence 3567777765432 1111111123567999998 54444 44556889888875
No 273
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.75 E-value=0.82 Score=39.07 Aligned_cols=179 Identities=8% Similarity=-0.048 Sum_probs=95.0
Q ss_pred CCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEe
Q 022111 78 DGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSW 157 (302)
Q Consensus 78 D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 157 (302)
...|+..++.... .. ..+. ....+..++|.+.. +.++.+-...+.|..++...... . ..+. ........+++
T Consensus 52 ~~~I~~i~~~g~~-~~--~~~~-~~~~~~~l~~d~~~-~~ly~~D~~~~~I~r~~~~g~~~-~-~~~~-~~~~~p~glav 123 (349)
T 3v64_C 52 RIDIRQVLPHRSE-YT--LLLN-NLENAIALDFHHRR-ELVFWSDVTLDRILRANLNGSNV-E-EVVS-TGLESPGGLAV 123 (349)
T ss_dssp BSCEEEECTTSCC-EE--EEEC-SCSCEEEEEEETTT-TEEEEEETTTTEEEEEETTSCSC-E-EEEC-SSCSCCCEEEE
T ss_pred ccceEEEeCCCCe-eE--Eeec-CCCceEEEEEeccc-cEEEEEeccCCceEEEecCCCCc-e-EEEe-CCCCCccEEEE
Confidence 3456666665432 11 1222 33457899998763 34444444556777666542211 1 1111 11112234444
Q ss_pred CCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecC-Ce
Q 022111 158 APAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQD-GT 236 (302)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D-~~ 236 (302)
.+.. +.++++-...+.|.+.++...... .. +...-...+.|++.|.+ +..+.+-... +.
T Consensus 124 d~~~-------------g~ly~~d~~~~~I~~~~~dG~~~~-~l---~~~~l~~P~~iavdp~~---g~ly~td~~~~~~ 183 (349)
T 3v64_C 124 DWVH-------------DKLYWTDSGTSRIEVANLDGAHRK-VL---LWQSLEKPRAIALHPME---GTIYWTDWGNTPR 183 (349)
T ss_dssp ETTT-------------TEEEEEETTTTEEEEEETTSCSCE-EE---ECTTCSCEEEEEEETTT---TEEEEEECSSSCE
T ss_pred ecCC-------------CeEEEEcCCCCeEEEEcCCCCceE-EE---EeCCCCCcceEEEecCc---CeEEEeccCCCCE
Confidence 4321 355666666778888887643211 11 11222346889999964 3556665555 77
Q ss_pred EEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC--ceEEeeec
Q 022111 237 VVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN--NVTLWKEA 287 (302)
Q Consensus 237 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d--~i~~w~~~ 287 (302)
|...+++.... ..+....-.....++|+|++..|-.++.. .|..++..
T Consensus 184 I~r~~~dG~~~---~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 184 IEASSMDGSGR---RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp EEEEETTSCSC---EESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEEeCCCCCc---EEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 77777654321 11212222356899999987777676554 46666653
No 274
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.73 E-value=0.71 Score=38.20 Aligned_cols=234 Identities=16% Similarity=0.261 Sum_probs=110.2
Q ss_pred CCCEEEEeeCC----CcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCC-----CeEEEEEcCCCCce
Q 022111 22 YGKRLATASSD----SSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYD-----GQVIIWKEGNQNDW 92 (302)
Q Consensus 22 ~~~~l~s~~~d----~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D-----~~i~iwd~~~~~~~ 92 (302)
++..++.||.+ ..+..||........+..+......- ++... ++.+++.|+.+ ..+.+||+.+. .|
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~---~~~lyv~GG~~~~~~~~~~~~~d~~~~-~W 89 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRA-GMVYM---AGLVFAVGGFNGSLRVRTVDSYDPVKD-QW 89 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEEE---TTEEEEESCBCSSSBCCCEEEEETTTT-EE
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccc-eEEEE---CCEEEEEeCcCCCccccceEEECCCCC-ce
Confidence 34566677754 35778887654443332222111111 12222 25677777754 34778887653 45
Q ss_pred eEEEEecCCCCCeeEEEecCCCCCcEEEEEecCC-----cEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCcee
Q 022111 93 TQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDG-----NISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALV 167 (302)
Q Consensus 93 ~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~-----~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 167 (302)
..+..+......-..+.+ + +.+++.|+.++ .+.+||..+ ..|...............+.+
T Consensus 90 ~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~d~~~-~~W~~~~~~p~~r~~~~~~~~---------- 154 (302)
T 2xn4_A 90 TSVANMRDRRSTLGAAVL--N--GLLYAVGGFDGSTGLSSVEAYNIKS-NEWFHVAPMNTRRSSVGVGVV---------- 154 (302)
T ss_dssp EEECCCSSCCBSCEEEEE--T--TEEEEEEEECSSCEEEEEEEEETTT-TEEEEECCCSSCCBSCEEEEE----------
T ss_pred eeCCCCCccccceEEEEE--C--CEEEEEcCCCCCccCceEEEEeCCC-CeEeecCCCCCcccCceEEEE----------
Confidence 554433221111222323 2 45666776553 355566542 234321100000000111111
Q ss_pred ecccCCCceeEEEeeCC-------CcEEEEEEecCcccccc-cc-ccccCCCceeEEEeeCCCCCCccEEEEEecCC---
Q 022111 168 GLGLLDPVQKLASCGCD-------NTVKVWKMYNGIWKMDC-FP-ALQMHSDWVRSVAWAPNLGLPKSTIASASQDG--- 235 (302)
Q Consensus 168 ~~~~~~~~~~l~s~~~D-------~~v~iwd~~~~~~~~~~-~~-~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~--- 235 (302)
+++.++.||.+ ..+.+||+.+..|.... .. ...+| ..+.+ + +..++.|+.++
T Consensus 155 ------~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~----~~~~~--~----~~iyv~GG~~~~~~ 218 (302)
T 2xn4_A 155 ------GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGA----GVGVL--N----NLLYAVGGHDGPLV 218 (302)
T ss_dssp ------TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSC----EEEEE--T----TEEEEECCBSSSSB
T ss_pred ------CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccc----cEEEE--C----CEEEEECCCCCCcc
Confidence 23566666542 34888998877665311 11 11122 12222 2 36677776543
Q ss_pred --eEEEEEeccCCcceeeeeecc-CCCcEEEEEEccCCCEEEEecCC------ceEEeeecCCceEEEee
Q 022111 236 --TVVIWTCAKEGEQWEGRVLKD-FKTPVWSVSWSLTGNLLAVADAN------NVTLWKEAVDGEWQQVS 296 (302)
Q Consensus 236 --~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~spdg~~la~~~~d------~i~~w~~~~~~~~~~~~ 296 (302)
.+.+||.... .|....... .......+. .++++++.|+.+ .+.+||.. ..+|.+..
T Consensus 219 ~~~~~~yd~~~~--~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~-~~~W~~~~ 283 (302)
T 2xn4_A 219 RKSVEVYDPTTN--AWRQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPT-TDKWTVVS 283 (302)
T ss_dssp CCCEEEEETTTT--EEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETT-TTEEEECS
T ss_pred cceEEEEeCCCC--CEeeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCC-CCeEEECC
Confidence 5788887653 353211000 011111222 267787887643 37888864 46899875
No 275
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.64 E-value=0.99 Score=39.17 Aligned_cols=198 Identities=8% Similarity=-0.059 Sum_probs=104.0
Q ss_pred ceeEEEEccCCCEEE-EeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCc
Q 022111 13 TVHDVAMDFYGKRLA-TASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQND 91 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~-s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~ 91 (302)
....++|++.+..|. +-...+.|+.++......+.+ +.........+++.+. .+.++++-...+.|.+.++.....
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~--~~~~~~~p~glavd~~-~g~lY~~d~~~~~I~~~~~dg~~~ 193 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV--VSTGLESPGGLAVDWV-HDKLYWTDSGTSRIEVANLDGAHR 193 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE--ECSSCSCCCCEEEETT-TTEEEEEETTTTEEEECBTTSCSC
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE--EeCCCCCccEEEEEeC-CCeEEEEcCCCCeEEEEeCCCCce
Confidence 355688886555444 434557777777654322221 2211223346777543 366667777778888888754321
Q ss_pred eeEEEEecCCCCCeeEEEecCCCCCcEEEEEecC-CcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecc
Q 022111 92 WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD-GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLG 170 (302)
Q Consensus 92 ~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d-~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 170 (302)
...+.........+++.|.. +.+..+-... +.|..++.. +........ .....-..++++|..
T Consensus 194 ---~~l~~~~l~~P~giavdp~~-g~ly~td~~~~~~I~r~~~d--G~~~~~~~~-~~~~~PnGlavd~~~--------- 257 (386)
T 3v65_B 194 ---KVLLWQSLEKPRAIALHPME-GTIYWTDWGNTPRIEASSMD--GSGRRIIAD-THLFWPNGLTIDYAG--------- 257 (386)
T ss_dssp ---EEEECSSCSCEEEEEEETTT-TEEEEEECSSSCEEEEEETT--SCSCEEEEC-SSCSCEEEEEEEGGG---------
T ss_pred ---EEeecCCCCCCcEEEEEcCC-CeEEEeccCCCCEEEEEeCC--CCCcEEEEE-CCCCCeeeEEEeCCC---------
Confidence 11122234567899998863 4444443333 556655543 221111111 112234677777643
Q ss_pred cCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEe
Q 022111 171 LLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242 (302)
Q Consensus 171 ~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~ 242 (302)
+.++++-+..+.|..+|+..... ... +.........|++.. +..+.+-...+.|..++.
T Consensus 258 ----~~lY~aD~~~~~I~~~d~dG~~~-~~~---~~~~~~~P~giav~~-----~~ly~td~~~~~V~~~~~ 316 (386)
T 3v65_B 258 ----RRMYWVDAKHHVIERANLDGSHR-KAV---ISQGLPHPFAITVFE-----DSLYWTDWHTKSINSANK 316 (386)
T ss_dssp ----TEEEEEETTTTEEEEECTTSCSC-EEE---ECSSCSSEEEEEEET-----TEEEEEETTTTEEEEEET
T ss_pred ----CEEEEEECCCCEEEEEeCCCCee-EEE---EECCCCCceEEEEEC-----CEEEEeeCCCCeEEEEEC
Confidence 35566666677888888754311 111 111123345666632 245666666777777763
No 276
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.64 E-value=0.93 Score=38.88 Aligned_cols=104 Identities=14% Similarity=0.117 Sum_probs=56.1
Q ss_pred ceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEec---CcccCeEEEEeeCC--CCCCEEEEEeC---C----Ce
Q 022111 13 TVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLK---GHRGPVWQVAWAHP--KFGSILASCSY---D----GQ 80 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~---~h~~~v~~v~~~~~--~~~~~l~s~s~---D----~~ 80 (302)
....++|.++|++++ +..++.|++++.. +. +.+..+. ........|+|.++ +++.+.++-+. + ..
T Consensus 30 ~P~~ia~~pdG~l~V-~e~~g~I~~~d~~-G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLV-TERPGRLVLISPS-GK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp CEEEEEEEETTEEEE-EETTTEEEEECSS-CE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCeEEEEcCCCeEEE-EeCCCEEEEEeCC-Cc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 456789999997555 5677989888632 22 3333221 12345778999753 12455555443 3 45
Q ss_pred EEEEEcCCCC-ce---eE-EEEec-CCCCCeeEEEecCCCCCcEEEE
Q 022111 81 VIIWKEGNQN-DW---TQ-AHTFN-DHKSSVNSIAWAPHELGLSLAC 121 (302)
Q Consensus 81 i~iwd~~~~~-~~---~~-~~~~~-~h~~~i~~l~~~pd~~~~~l~s 121 (302)
|..++..... .. +. +..+. ...+....++|.|| |.+.++
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pD--G~Lyvt 151 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPD--GMLYIT 151 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTT--SCEEEE
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCC--CcEEEE
Confidence 6666664321 11 11 11122 11223577999998 544444
No 277
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.50 E-value=1.1 Score=38.63 Aligned_cols=102 Identities=12% Similarity=0.093 Sum_probs=59.7
Q ss_pred CCcEEEEEEecCccccccccccccC-CCceeEEEeeCCCCCCccEEEEEec---C------------CeEEEEEeccCCc
Q 022111 184 DNTVKVWKMYNGIWKMDCFPALQMH-SDWVRSVAWAPNLGLPKSTIASASQ---D------------GTVVIWTCAKEGE 247 (302)
Q Consensus 184 D~~v~iwd~~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~~~~l~s~s~---D------------~~i~iwd~~~~~~ 247 (302)
+..|.+|++.........+.++.+. -...+++...|++ .+.++... | ..=++|.+... .
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G----~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~-~ 212 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPE----HFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN-D 212 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETT----EEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT-C
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCC----CEEecCCcEeCCcccccchhhccCCccEEEEEECC-e
Confidence 5678899987643333333344432 2347899999885 56666541 1 22344444321 1
Q ss_pred ceeeeeeccCCCcEEEEEEccCCCEEEEecCC--ceEEeeecCCceEE
Q 022111 248 QWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN--NVTLWKEAVDGEWQ 293 (302)
Q Consensus 248 ~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d--~i~~w~~~~~~~~~ 293 (302)
...+.+.-...+.++|||||+.|.++... .|..|+...+|...
T Consensus 213 ---~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~ 257 (355)
T 3sre_A 213 ---VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLT 257 (355)
T ss_dssp ---CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred ---EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEe
Confidence 11222222346889999999988887654 68888876666544
No 278
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.48 E-value=0.96 Score=39.84 Aligned_cols=105 Identities=15% Similarity=0.158 Sum_probs=62.9
Q ss_pred CeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccc------cc--cccc------cCCCceeEEE
Q 022111 151 GVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMD------CF--PALQ------MHSDWVRSVA 216 (302)
Q Consensus 151 ~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~------~~--~~~~------~h~~~v~~v~ 216 (302)
.+..+..+|+ |.+||..+ +..|.|-.+..+..... .+ +.+. .....|..+.
T Consensus 67 ~i~qlvlSps--------------G~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVl 131 (452)
T 3pbp_A 67 DTFHVISSTS--------------GDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVL 131 (452)
T ss_dssp TTCEEEECTT--------------SSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEE
T ss_pred ceeEEEECCC--------------CCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEE
Confidence 3556666765 35666665 45788888763321111 00 1111 1357899999
Q ss_pred eeCCCCCCccEEEEEecCCeEEEEEeccCC-cceee-eeeccC-----CCcEEEEEEccCCC
Q 022111 217 WAPNLGLPKSTIASASQDGTVVIWTCAKEG-EQWEG-RVLKDF-----KTPVWSVSWSLTGN 271 (302)
Q Consensus 217 ~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~-~~~~~-~~~~~~-----~~~v~~~~~spdg~ 271 (302)
|||-+ ..+..|++-..|+.||+||+.... .+... .....+ ...|.+++|.++|-
T Consensus 132 WHPl~-~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~l 192 (452)
T 3pbp_A 132 FHPKS-YRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGL 192 (452)
T ss_dssp ECTTB-GGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSS
T ss_pred ecccc-CCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCc
Confidence 99975 346799999999999999997521 11100 000111 14678888888663
No 279
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.33 E-value=1.1 Score=37.94 Aligned_cols=168 Identities=8% Similarity=0.028 Sum_probs=91.2
Q ss_pred ecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecc-c--C--CCCeEEEEe---CCCCCCCceeec
Q 022111 98 FNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQ-A--H--PVGVTSVSW---APAMAPGALVGL 169 (302)
Q Consensus 98 ~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~-~--h--~~~v~~~~~---~~~~~~~~~~~~ 169 (302)
+...+....+++|.+.. +.++++.-..++|..|+......... .+.. . . ...+..+.| .|.
T Consensus 8 ~~~~~~yPE~~~wd~~~-g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~--------- 76 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTR-QVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNS--------- 76 (334)
T ss_dssp ECCTTCCCSCEEEETTT-TEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSC---------
T ss_pred ecCcccCCcCccCcCCC-CEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCC---------
Confidence 34455566788898753 44444444789999997643222222 2211 0 0 112456777 343
Q ss_pred ccCCCceeEEEee-------------CCCcEEEEEEe---cCccc--cccccc------cccCC-CceeEEEeeCCCCCC
Q 022111 170 GLLDPVQKLASCG-------------CDNTVKVWKMY---NGIWK--MDCFPA------LQMHS-DWVRSVAWAPNLGLP 224 (302)
Q Consensus 170 ~~~~~~~~l~s~~-------------~D~~v~iwd~~---~~~~~--~~~~~~------~~~h~-~~v~~v~~~p~~~~~ 224 (302)
+.+++..- .++.|..+|+. ++... ...-.. ..+.. ...++++..++|
T Consensus 77 -----grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~G--- 148 (334)
T 2p9w_A 77 -----KRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDG--- 148 (334)
T ss_dssp -----CEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTS---
T ss_pred -----CcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCC---
Confidence 24444322 26778899988 44211 110000 00111 247889998885
Q ss_pred ccEEEEEecC-CeEEEEEeccCCcceeeeeeccC-----CCcEEEEEEccCCCEEEEecCC-ceEEeeecC
Q 022111 225 KSTIASASQD-GTVVIWTCAKEGEQWEGRVLKDF-----KTPVWSVSWSLTGNLLAVADAN-NVTLWKEAV 288 (302)
Q Consensus 225 ~~~l~s~s~D-~~i~iwd~~~~~~~~~~~~~~~~-----~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~ 288 (302)
+.-++++.. +.|...+.+.. ... .....+ ......|+++|+|+.|++.... .+..+|+..
T Consensus 149 -naYVt~s~~~~~I~rV~pdG~--~~~-~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 149 -NSYVAFALGMPAIARVSADGK--TVS-TFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp -CEEEEEEESSCEEEEECTTSC--CEE-EEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred -CEEEeCCCCCCeEEEEeCCCC--EEe-eeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 677778777 76544443321 111 111111 1225689999999999888666 588888653
No 280
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.24 E-value=1.1 Score=37.06 Aligned_cols=239 Identities=14% Similarity=0.178 Sum_probs=112.4
Q ss_pred cCCCEEEEee-CC-----CcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCC-----CeEEEEEcCCC
Q 022111 21 FYGKRLATAS-SD-----SSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYD-----GQVIIWKEGNQ 89 (302)
Q Consensus 21 ~~~~~l~s~~-~d-----~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D-----~~i~iwd~~~~ 89 (302)
.++..++.|| .+ ..+.+||........+..+......-..+.+ ++.+++.|+.+ ..+.+||+.+.
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~l~v~GG~~~~~~~~~~~~~d~~~~ 88 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSL----HDRIYVIGGYDGRSRLSSVECLDYTAD 88 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE----TTEEEEECCBCSSCBCCCEEEEETTCC
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEE----CCEEEEEcCCCCCccCceEEEEECCCC
Confidence 3456777777 33 3577888765443333323221111112222 25677777755 45788888654
Q ss_pred C--ceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecC-----CcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCC
Q 022111 90 N--DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD-----GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMA 162 (302)
Q Consensus 90 ~--~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d-----~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 162 (302)
. .|..+..+......-..+.+ + +.+++.|+.+ +.+.+||..+ ..|...............+..
T Consensus 89 ~~~~W~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~d~~~-~~W~~~~~~p~~r~~~~~~~~----- 158 (301)
T 2vpj_A 89 EDGVWYSVAPMNVRRGLAGATTL--G--DMIYVSGGFDGSRRHTSMERYDPNI-DQWSMLGDMQTAREGAGLVVA----- 158 (301)
T ss_dssp TTCCCEEECCCSSCCBSCEEEEE--T--TEEEEECCBCSSCBCCEEEEEETTT-TEEEEEEECSSCCBSCEEEEE-----
T ss_pred CCCeeEECCCCCCCccceeEEEE--C--CEEEEEcccCCCcccceEEEEcCCC-CeEEECCCCCCCcccceEEEE-----
Confidence 2 15554333222112222222 2 4566666644 3466677543 234322110000000111111
Q ss_pred CCceeecccCCCceeEEEeeCC-----CcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecC---
Q 022111 163 PGALVGLGLLDPVQKLASCGCD-----NTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQD--- 234 (302)
Q Consensus 163 ~~~~~~~~~~~~~~~l~s~~~D-----~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D--- 234 (302)
+++.++.||.+ ..+.+||+.+..|... ..+......-..+.+ + +..++.|+.+
T Consensus 159 -----------~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~--~~~p~~r~~~~~~~~--~----~~i~v~GG~~~~~ 219 (301)
T 2vpj_A 159 -----------SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV--TPMATKRSGAGVALL--N----DHIYVVGGFDGTA 219 (301)
T ss_dssp -----------TTEEEEECCBCSSCBCCCEEEEETTTTEEEEE--CCCSSCCBSCEEEEE--T----TEEEEECCBCSSS
T ss_pred -----------CCEEEEECCCCCCcccceEEEEeCCCCcEEeC--CCCCcccccceEEEE--C----CEEEEEeCCCCCc
Confidence 24566777654 4588899887766532 111100111112222 2 3567777664
Q ss_pred --CeEEEEEeccCCcceeeeee-ccCCCcEEEEEEccCCCEEEEecCC------ceEEeeecCCceEEEeee
Q 022111 235 --GTVVIWTCAKEGEQWEGRVL-KDFKTPVWSVSWSLTGNLLAVADAN------NVTLWKEAVDGEWQQVSV 297 (302)
Q Consensus 235 --~~i~iwd~~~~~~~~~~~~~-~~~~~~v~~~~~spdg~~la~~~~d------~i~~w~~~~~~~~~~~~~ 297 (302)
..+.+||+... .|..... .........+.+ ++++++.|+.+ .+.+||.. ..+|.+...
T Consensus 220 ~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~-~~~W~~~~~ 286 (301)
T 2vpj_A 220 HLSSVEAYNIRTD--SWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPI-IDSWEVVTS 286 (301)
T ss_dssp BCCCEEEEETTTT--EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETT-TTEEEEEEE
T ss_pred ccceEEEEeCCCC--cEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCC-CCeEEEcCC
Confidence 35888887653 3432110 101111122222 67777777543 36677754 468987653
No 281
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.20 E-value=1.5 Score=38.60 Aligned_cols=153 Identities=11% Similarity=0.099 Sum_probs=86.8
Q ss_pred CCEEEEEeCCCeEEEEEcCCCCceeEEEEecC--CCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCC---------
Q 022111 69 GSILASCSYDGQVIIWKEGNQNDWTQAHTFND--HKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADG--------- 137 (302)
Q Consensus 69 ~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~--h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~--------- 137 (302)
|..++.+ .++.||.=++......+.++ ... .-+.|..+..+|+ |.+||.. .+..|.+-.+....
T Consensus 32 ~t~i~~a-~~n~iR~~~i~~~~~Yk~L~-~~~~i~f~~i~qlvlSps--G~lLAl~-g~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 32 GTRIVFI-QDNIIRWYNVLTDSLYHSLN-FSRHLVLDDTFHVISSTS--GDLLCLF-NDNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp TTEEEEE-ETTEEEEEETTTCSSCEEEE-CTTTCCCCTTCEEEECTT--SSEEEEE-CSSEEEEEECCTTCSCCCCHHHH
T ss_pred CCEEEEE-ECCEEEEEECCCCCcceEEe-cCcccccCceeEEEECCC--CCEEEEe-cCCeEEEEEecCccccCcccccc
Confidence 4444432 34667766665332233222 221 1235778999997 6677765 45688887775221
Q ss_pred -Ceeeeeeccc-----CCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccc------ccc
Q 022111 138 -GWDTTRIDQA-----HPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCF------PAL 205 (302)
Q Consensus 138 -~~~~~~~~~~-----h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~------~~~ 205 (302)
..+......+ ...+|..+.|+|-+. .+..|++-..|+.||+||+.........+ ..+
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~-----------~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~ 175 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSY-----------RDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGL 175 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBG-----------GGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEES
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccC-----------CCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCC
Confidence 0111111111 245799999999642 24678888999999999987521110100 112
Q ss_pred ccCCCceeEEEeeCCCCCCccEEEEEecCCeEEE
Q 022111 206 QMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVI 239 (302)
Q Consensus 206 ~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~i 239 (302)
......|.+++|.+++ + --++++.+..|-|.-
T Consensus 176 d~~~~ev~S~~Fg~~~-l-TLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 176 DARVNDITDLEFSKDG-L-TLYCLNTTEGGDIFA 207 (452)
T ss_dssp CSSCCCEEEEEECTTS-S-CEEEEECTTSCEEEE
T ss_pred CcccceEEEEEEcCCC-c-EEEEEecCCCCCEEE
Confidence 2334668899998864 2 245666667777654
No 282
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.08 E-value=1.8 Score=38.93 Aligned_cols=163 Identities=10% Similarity=0.053 Sum_probs=84.9
Q ss_pred eEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEe-cCCCCCeeEEEe-------cCCCCCcEEEEEecCC-c-
Q 022111 58 VWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTF-NDHKSSVNSIAW-------APHELGLSLACGSSDG-N- 127 (302)
Q Consensus 58 v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~-~~h~~~i~~l~~-------~pd~~~~~l~sg~~d~-~- 127 (302)
-..|+|.|...++++++....+.|++.|+..... ..+... .........++| .++ +..|..+...+ .
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v-~~l~~~~~~~~~~p~~ia~~~~~~~~d~~--G~~lyvad~~~~~~ 217 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRML-SSPLNINTIPTNRIRSIAFNKKIEGYADE--AEYMIVAIDYDGKG 217 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEE-EEEECCTTSSCSBEEEEEECCCBTTTBCT--TCEEEEEECCCTTG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEE-EEEEccCccccCCCcEEEEeecccccCCC--CCEEEEEeCCCCCc
Confidence 3468887522245555544456788888766422 111111 112235789999 887 55455554443 2
Q ss_pred -----EEEEEecCCCCeee----eee-cccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEe----
Q 022111 128 -----ISVFTATADGGWDT----TRI-DQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMY---- 193 (302)
Q Consensus 128 -----v~~~~~~~~~~~~~----~~~-~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~---- 193 (302)
|.+++...++.+.. ..+ ...|+ ..++.+|. ++.++++-..++.|..+|+.
T Consensus 218 ~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p---~giavdp~-------------~g~LYvtd~~~g~V~r~d~~~~~~ 281 (496)
T 3kya_A 218 DESPSVYIIKRNADGTFDDRSDIQLIAAYKQC---NGATIHPI-------------NGELYFNSYEKGQVFRLDLVDYFK 281 (496)
T ss_dssp GGEEEEEEEECCTTSCCSTTSCEEEEEEESCC---CCEEECTT-------------TCCEEEEETTTTEEEEECHHHHHH
T ss_pred ccCceEEEEecCCCCceeecccceeeccCCCc---eEEEEcCC-------------CCeEEEEECCCCEEEEEecccccc
Confidence 44444332222210 000 00111 22233332 24566677778889999987
Q ss_pred ---cCcc-c---------cccccccccCCCceeEEEeeCCCCCCcc-EEEEEecCCeEEEEEecc
Q 022111 194 ---NGIW-K---------MDCFPALQMHSDWVRSVAWAPNLGLPKS-TIASASQDGTVVIWTCAK 244 (302)
Q Consensus 194 ---~~~~-~---------~~~~~~~~~h~~~v~~v~~~p~~~~~~~-~l~s~s~D~~i~iwd~~~ 244 (302)
++.. . ...+.. .+...+-+.|+|+|++ + ..++=+..+.|+.++...
T Consensus 282 ~~~tg~~~tp~~~~~~g~~~~l~~-~~~~~~p~~ia~~p~G----~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 282 TIKNGGSWDPIVKNNPNTFKQLFT-IADPSWEFQIFIHPTG----KYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp HHHTTCCCCCBGGGCTTTEEEEEE-CSSSSCCEEEEECTTS----SEEEEEETTTTEEEEEEEET
T ss_pred cccCceeecccccccccccceeEe-cCCCCCceEEEEcCCC----CEEEEEeCCCCEEEEEecCC
Confidence 3321 0 001111 1223456899999996 4 466667788888877653
No 283
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=95.04 E-value=1.7 Score=38.32 Aligned_cols=155 Identities=10% Similarity=0.084 Sum_probs=81.6
Q ss_pred EEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEec-CC----cEEEEEe
Q 022111 59 WQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSS-DG----NISVFTA 133 (302)
Q Consensus 59 ~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~-d~----~v~~~~~ 133 (302)
..|++++...+.+ ..+...+.|+.+|+.... +..+.........++|.++ +..|..+.. .+ .+.+++.
T Consensus 140 ~~lavdp~~~g~L-yv~d~~~~I~~id~~~~~----v~~~~~~~~~P~~ia~d~~--G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 140 VWLSFDPKNHNHL-YLVGEQHPTRLIDFEKEY----VSTVYSGLSKVRTICWTHE--ADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CEEEEETTEEEEE-EEEEBTEEEEEEETTTTE----EEEEECCCSCEEEEEECTT--SSEEEEEECCSCTTSEEEEEEEG
T ss_pred CEEEECCCCCCeE-EEEeCCCcEEEEECCCCE----EEEEecCCCCcceEEEeCC--CCEEEEEeCCCCcccceEEEEeC
Confidence 4677764112444 444444788888876532 2233334456789999987 554444443 22 2222222
Q ss_pred cCCCCee-eeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCce
Q 022111 134 TADGGWD-TTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWV 212 (302)
Q Consensus 134 ~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v 212 (302)
.+.+. ...+. . ......++++|. ++.++++-..++.|..+|...+... .+... +...+-
T Consensus 213 --~g~~~~~~~l~-~-~~~p~giavdp~-------------~g~lyv~d~~~~~V~~~~~~~~~~~--~~~~~-~~~~~P 272 (430)
T 3tc9_A 213 --ESGFKVITELT-K-GQNCNGAETHPI-------------NGELYFNSWNAGQVFRYDFTTQETT--PLFTI-QDSGWE 272 (430)
T ss_dssp --GGTSCSEEEEE-E-CSSCCCEEECTT-------------TCCEEEEETTTTEEEEEETTTTEEE--EEEEC-SSSSCC
T ss_pred --CCceeeeeeec-c-CCCceEEEEeCC-------------CCEEEEEECCCCEEEEEECCCCcEE--EEEEc-CCCCcc
Confidence 22121 01110 0 111233445542 2455666666778888887654210 11111 112446
Q ss_pred eEEEeeCCCCCCcc-EEEEEecCCeEEEEEecc
Q 022111 213 RSVAWAPNLGLPKS-TIASASQDGTVVIWTCAK 244 (302)
Q Consensus 213 ~~v~~~p~~~~~~~-~l~s~s~D~~i~iwd~~~ 244 (302)
+.|+|+|++ + .+++-...+.|..++.+.
T Consensus 273 ~gia~~pdG----~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 273 FHIQFHPSG----NYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEEEECTTS----SEEEEEETTTTEEEEEEEET
T ss_pred eeEEEcCCC----CEEEEEECCCCEEEEEeCCc
Confidence 789999996 4 566667788899988764
No 284
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.85 E-value=0.29 Score=46.32 Aligned_cols=186 Identities=8% Similarity=-0.083 Sum_probs=88.2
Q ss_pred CCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCc-eeEEEEecCCCCCeeEEE
Q 022111 31 SDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQND-WTQAHTFNDHKSSVNSIA 109 (302)
Q Consensus 31 ~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~-~~~~~~~~~h~~~i~~l~ 109 (302)
..+.|+..++..... ...+.. ...+..|+|.+. .+.++++-...+.|..+++..... ......+.........|+
T Consensus 384 ~~~~I~~id~~~~~~--~~~~~~-~~~p~gla~d~~-~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~gla 459 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEY--TSLIPN-LRNVVALDTEVA-SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 459 (699)
T ss_dssp CTTC-CEECTTSCCE--ECCSCC-CTTCCCCEEETT-TTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEE
T ss_pred CccceEEEeCCCCcc--eeeecc-CcceEEEccccc-cCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEE
Confidence 345677777654221 111222 233557788653 345555555677888888754100 001111111122345677
Q ss_pred ecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeC-CCcEE
Q 022111 110 WAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGC-DNTVK 188 (302)
Q Consensus 110 ~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~-D~~v~ 188 (302)
+.+.. +.++++-...+.|.++++... .....+. ........+++.|.. +.++++-.. .+.|.
T Consensus 460 vD~~~-g~LY~tD~~~~~I~v~d~dg~--~~~~l~~-~~~~~P~giavDp~~-------------g~ly~td~~~~~~I~ 522 (699)
T 1n7d_A 460 VDWIH-SNIYWTDSVLGTVSVADTKGV--KRKTLFR-EQGSKPRAIVVDPVH-------------GFMYWTDWGTPAKIK 522 (699)
T ss_dssp CCCSS-SBCEECCTTTSCEEEEBSSSC--CEEEECC-CSSCCCCCEECCSSS-------------SCCEECCCSSSCCEE
T ss_pred EEeeC-CcEEEEeccCCeEEEEecCCC--ceEEEEe-CCCCCcceEEEccCC-------------CcEEEcccCCCCeEE
Confidence 76442 344444445677877765421 1111111 111122344555432 233443322 25677
Q ss_pred EEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEecc
Q 022111 189 VWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAK 244 (302)
Q Consensus 189 iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~ 244 (302)
++++...... ..+ ...-.+-+.|+|+|++ +...++-+..+.|..+++..
T Consensus 523 ~~~~dG~~~~-~l~---~~~l~~PnGlavd~~~---~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 523 KGGLNGVDIY-SLV---TENIQWPNGITLDLLS---GRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp BCCSSSCCCC-EES---CSSCSSCCCEEECTTT---CCEEEEETTTTEEEEECSSS
T ss_pred EEeCCCCCee-EEE---eCCCCCccEEEEeccC---CEEEEEecCCCeEEEEccCC
Confidence 6666432111 010 1112345789999875 35666667788899998864
No 285
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.72 E-value=3.1 Score=39.85 Aligned_cols=216 Identities=9% Similarity=-0.056 Sum_probs=109.6
Q ss_pred CCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCc-eeEEEEecCCCCCeeEEE
Q 022111 31 SDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQND-WTQAHTFNDHKSSVNSIA 109 (302)
Q Consensus 31 ~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~-~~~~~~~~~h~~~i~~l~ 109 (302)
....|+..++...... .+......+..|.|... .+.++++-...+.|..+++..... ......+.........|+
T Consensus 402 n~~~Ir~i~l~~~~~~---~l~~~~~~~~gl~~d~~-~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLA 477 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYT---SLIPNLRNVVALDTEVA-SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 477 (791)
T ss_dssp CBSSEEEECTTSCCCE---EEECSCSSEEEEEEETT-TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEE
T ss_pred cccceeEeeccCCcce---eeecCCCceEEEeeccc-CCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceee
Confidence 4456777777543222 22223445678898753 356667777778888888754211 011122332344567788
Q ss_pred ecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeC-CCcEE
Q 022111 110 WAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGC-DNTVK 188 (302)
Q Consensus 110 ~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~-D~~v~ 188 (302)
+.+.. +.+..+-...+.|.+.++... .....+. ........|+..|.. +.++++-.. .+.|.
T Consensus 478 vD~~~-~~LY~tD~~~~~I~v~~ldG~--~~~~l~~-~~l~~P~gIaVDp~~-------------g~LYwtD~g~~~~I~ 540 (791)
T 3m0c_C 478 VDWIH-SNIYWTDSVLGTVSVADTKGV--KRKTLFR-ENGSKPRAIVVDPVH-------------GFMYWTDWGTPAKIK 540 (791)
T ss_dssp EETTT-TEEEEEETTTTEEEEEETTSS--SEEEEEE-CTTCCEEEEEEETTT-------------TEEEEEECSSSCEEE
T ss_pred eeecC-CcEEEEecCCCeEEEEeCCCC--eEEEEEe-CCCCCcceEEEecCC-------------CCEEEecCCCCCeEE
Confidence 87652 344555555677777776422 1111111 222335666666642 344454422 25677
Q ss_pred EEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeecc--CCCcEEEEEE
Q 022111 189 VWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKD--FKTPVWSVSW 266 (302)
Q Consensus 189 iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~--~~~~v~~~~~ 266 (302)
+.++...... .. +...-.+.+.|++.|.. +...++=...+.|...++..... ..+... .-....+|++
T Consensus 541 ~~~~dG~~~~-~l---v~~~l~~P~GLavD~~~---~~LYwaD~~~~~I~~~d~dG~~~---~~v~~~~~~l~~P~glav 610 (791)
T 3m0c_C 541 KGGLNGVDIY-SL---VTENIQWPNGITLDLLS---GRLYWVDSKLHSISSIDVNGGNR---KTILEDEKRLAHPFSLAV 610 (791)
T ss_dssp EEETTSCCEE-EE---ECSSCSCEEEEEEETTT---TEEEEEETTTTEEEEEETTSCSC---EEEEECTTTTSSEEEEEE
T ss_pred EEecCCCceE-EE---EeCCCCCceEEEEecCC---CeEEEEeCCCCcEEEEecCCCce---EEEecCCCccCCCCEEEE
Confidence 7776543111 11 11222467889999764 35555555667788888764322 122221 1122446665
Q ss_pred ccCCCEEEEecCC
Q 022111 267 SLTGNLLAVADAN 279 (302)
Q Consensus 267 spdg~~la~~~~d 279 (302)
.+.+|..++..
T Consensus 611 --~~~~lYwtD~~ 621 (791)
T 3m0c_C 611 --FEDKVFWTDII 621 (791)
T ss_dssp --ETTEEEEEETT
T ss_pred --eCCEEEEEECC
Confidence 34456566554
No 286
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=94.67 E-value=1.7 Score=36.57 Aligned_cols=223 Identities=8% Similarity=-0.042 Sum_probs=113.0
Q ss_pred CCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEec
Q 022111 32 DSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWA 111 (302)
Q Consensus 32 d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~ 111 (302)
...|+..++..........+.+ ......+.|.+. .+.++.+-...+.|..+++........+ +.........+++.
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~-~~~~~~ld~d~~-~~~lyw~D~~~~~I~r~~~~g~~~~~~~--~~~~l~~p~glavd 87 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGG-LEDAAAVDFVFS-HGLIYWSDVSEEAIKRTEFNKTESVQNV--VVSGLLSPDGLACD 87 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEE-EEEEEEEEEEGG-GTEEEEEETTTTEEEEEETTSSSCCCEE--EEECCSCCCEEEEE
T ss_pred cCeEEEEECCCCceEEEEEecC-CCccEEEEEEeC-CCEEEEEECCCCcEEEEEccCCCceEEE--EcCCCCCccEEEEE
Confidence 4668888886542111111222 224567888753 3566677677888988887654211111 11122345677777
Q ss_pred CCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEe-eCCCcEEEE
Q 022111 112 PHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASC-GCDNTVKVW 190 (302)
Q Consensus 112 pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~-~~D~~v~iw 190 (302)
+.. +.+..+-...+.|.+++.... ....... ........++..|.. +..+.+- +..+.|...
T Consensus 88 ~~~-g~ly~~d~~~~~I~~~~~dG~--~~~~l~~-~~~~~P~giavdp~~-------------g~ly~td~~~~~~I~r~ 150 (318)
T 3sov_A 88 WLG-EKLYWTDSETNRIEVSNLDGS--LRKVLFW-QELDQPRAIALDPSS-------------GFMYWTDWGEVPKIERA 150 (318)
T ss_dssp TTT-TEEEEEETTTTEEEEEETTSC--SCEEEEC-SSCSSEEEEEEEGGG-------------TEEEEEECSSSCEEEEE
T ss_pred cCC-CeEEEEECCCCEEEEEECCCC--cEEEEEe-CCCCCccEEEEeCCC-------------CEEEEEecCCCCEEEEE
Confidence 542 444455455677877775422 1111111 112234556665532 2344443 234567766
Q ss_pred EEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCC
Q 022111 191 KMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTG 270 (302)
Q Consensus 191 d~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg 270 (302)
++...... ... ...-..-+.|+++|++ +....+=+..+.|..+|++.... ..+..+......++++..+
T Consensus 151 ~~dG~~~~-~~~---~~~l~~Pnglavd~~~---~~lY~aD~~~~~I~~~d~dG~~~---~~~~~~~~~~P~glav~~~- 219 (318)
T 3sov_A 151 GMDGSSRF-III---NSEIYWPNGLTLDYEE---QKLYWADAKLNFIHKSNLDGTNR---QAVVKGSLPHPFALTLFED- 219 (318)
T ss_dssp ETTSCSCE-EEE---CSSCSCEEEEEEETTT---TEEEEEETTTTEEEEEETTSCSC---EEEECSCCSCEEEEEEETT-
T ss_pred EcCCCCeE-EEE---ECCCCCccEEEEeccC---CEEEEEECCCCEEEEEcCCCCce---EEEecCCCCCceEEEEeCC-
Confidence 66432110 110 1112345889999975 35666666778899998864321 1222222234566776432
Q ss_pred CEEEEecCC-ceEEeee
Q 022111 271 NLLAVADAN-NVTLWKE 286 (302)
Q Consensus 271 ~~la~~~~d-~i~~w~~ 286 (302)
.++.+-... .|..++.
T Consensus 220 ~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 220 ILYWTDWSTHSILACNK 236 (318)
T ss_dssp EEEEEETTTTEEEEEET
T ss_pred EEEEEecCCCeEEEEEC
Confidence 333332222 5666665
No 287
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=94.52 E-value=2.2 Score=37.17 Aligned_cols=192 Identities=9% Similarity=-0.060 Sum_probs=101.0
Q ss_pred EEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCce-eEEEEecCCCC
Q 022111 25 RLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDW-TQAHTFNDHKS 103 (302)
Q Consensus 25 ~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~-~~~~~~~~h~~ 103 (302)
+|+.+ ....|+..++....... +......+..|+|.+. .+.++.+-...+.|..+++...... .....+.....
T Consensus 85 ~ll~~-~~~~I~~i~l~~~~~~~---~~~~~~~~~~l~~d~~-~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 159 (400)
T 3p5b_L 85 YLFFT-NRHEVRKMTLDRSEYTS---LIPNLRNVVALDTEVA-SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ 159 (400)
T ss_dssp EEEEE-ETTEEEEECTTSCSCEE---EECSCSCEEEEEEETT-TTEEEEEETTTTEEEEEEC------CCCEEEECSSCS
T ss_pred eeEEe-ccceeEEEccCCcceeE---eccccCcceEEeeeec-cCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCC
Confidence 44433 35678888876543222 2223456778999753 3566666667788888887542100 01112222344
Q ss_pred CeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEe-e
Q 022111 104 SVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASC-G 182 (302)
Q Consensus 104 ~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~-~ 182 (302)
....+++.+.. +.+..+-...+.|.+.++.. ......+. ........++..|.. +.++.+- +
T Consensus 160 ~p~glavD~~~-~~lY~~d~~~~~I~~~~~~g--~~~~~l~~-~~~~~P~~iavdp~~-------------g~ly~td~~ 222 (400)
T 3p5b_L 160 APDGLAVDWIH-SNIYWTDSVLGTVSVADTKG--VKRKTLFR-ENGSKPRAIVVDPVH-------------GFMYWTDWG 222 (400)
T ss_dssp CEEEEEEETTT-TEEEEEETTTTEEEEECTTT--CSEEEEEE-CSSCCEEEEEEETTT-------------TEEEEEECS
T ss_pred CcccEEEEecC-CceEEEECCCCeEEEEeCCC--CceEEEEe-CCCCCcceEEEeccc-------------CeEEEEeCC
Confidence 56778887642 34444444566777766542 11111111 122234566666542 3444444 2
Q ss_pred CCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccC
Q 022111 183 CDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKE 245 (302)
Q Consensus 183 ~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~ 245 (302)
..+.|...++...... .. ....-.+-+.|+++|+. +....+=+..+.|..+|++..
T Consensus 223 ~~~~I~~~~~dG~~~~-~~---~~~~l~~P~glavd~~~---~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 223 TPAKIKKGGLNGVDIY-SL---VTENIQWPNGITLDLLS---GRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp SSCCEEEEETTSCSCE-EE---ECSSCSCEEEEEEETTT---TEEEEEETTTTEEEEEETTSC
T ss_pred CCCEEEEEeCCCCccE-EE---EECCCCceEEEEEEeCC---CEEEEEECCCCEEEEEeCCCC
Confidence 2356777776543111 11 11122457889999875 355566566778988887643
No 288
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.48 E-value=1.7 Score=35.85 Aligned_cols=233 Identities=13% Similarity=0.133 Sum_probs=111.4
Q ss_pred CCEEEEeeC--CCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCC----CeEEEEEcCCCCceeEEE
Q 022111 23 GKRLATASS--DSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYD----GQVIIWKEGNQNDWTQAH 96 (302)
Q Consensus 23 ~~~l~s~~~--d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D----~~i~iwd~~~~~~~~~~~ 96 (302)
+..++.||. ...+.+||........+..+......-..+.+ ++.+++.|+.+ ..+.+||+.+. .|..+.
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~d~~~~-~W~~~~ 86 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW----DNVVYILGGSQLFPIKRMDCYNVVKD-SWYSKL 86 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE----TTEEEEECCBSSSBCCEEEEEETTTT-EEEEEE
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE----CCEEEEEeCCCCCCcceEEEEeCCCC-eEEECC
Confidence 345556664 35688888765544433333211111112222 25677777755 56778887653 465554
Q ss_pred EecCCCCCeeEEEecCCCCCcEEEEEecC------CcEEEEEecCCCCeeeee-ecccCCCCeEEEEeCCCCCCCceeec
Q 022111 97 TFNDHKSSVNSIAWAPHELGLSLACGSSD------GNISVFTATADGGWDTTR-IDQAHPVGVTSVSWAPAMAPGALVGL 169 (302)
Q Consensus 97 ~~~~h~~~i~~l~~~pd~~~~~l~sg~~d------~~v~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~~~~~ 169 (302)
.+......-..+.+ + +.+++.|+.+ ..+.+||..+. .|.... +... ......+..
T Consensus 87 ~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~-r~~~~~~~~------------ 148 (306)
T 3ii7_A 87 GPPTPRDSLAACAA--E--GKIYTSGGSEVGNSALYLFECYDTRTE-SWHTKPSMLTQ-RCSHGMVEA------------ 148 (306)
T ss_dssp CCSSCCBSCEEEEE--T--TEEEEECCBBTTBSCCCCEEEEETTTT-EEEEECCCSSC-CBSCEEEEE------------
T ss_pred CCCccccceeEEEE--C--CEEEEECCCCCCCcEeeeEEEEeCCCC-ceEeCCCCcCC-cceeEEEEE------------
Confidence 33222122222333 2 4566777655 45777776532 343211 1000 000111111
Q ss_pred ccCCCceeEEEeeC---------CCcEEEEEEecCcccccc-cc-ccccCCCceeEEEeeCCCCCCccEEEEEecC----
Q 022111 170 GLLDPVQKLASCGC---------DNTVKVWKMYNGIWKMDC-FP-ALQMHSDWVRSVAWAPNLGLPKSTIASASQD---- 234 (302)
Q Consensus 170 ~~~~~~~~l~s~~~---------D~~v~iwd~~~~~~~~~~-~~-~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D---- 234 (302)
+++.++.||. -..+.+||+.+..|.... .. ....| ..+.+ + +..++.|+.+
T Consensus 149 ----~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~----~~~~~--~----~~i~v~GG~~~~~~ 214 (306)
T 3ii7_A 149 ----NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNH----GLVFV--K----DKIFAVGGQNGLGG 214 (306)
T ss_dssp ----TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSC----EEEEE--T----TEEEEECCEETTEE
T ss_pred ----CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcc----eEEEE--C----CEEEEEeCCCCCCC
Confidence 2355666653 345888998877664321 00 11112 12222 2 2566666653
Q ss_pred -CeEEEEEeccCCcceeeeee-ccCCCcEEEEEEccCCCEEEEecC------CceEEeeecCCceEEEeee
Q 022111 235 -GTVVIWTCAKEGEQWEGRVL-KDFKTPVWSVSWSLTGNLLAVADA------NNVTLWKEAVDGEWQQVSV 297 (302)
Q Consensus 235 -~~i~iwd~~~~~~~~~~~~~-~~~~~~v~~~~~spdg~~la~~~~------d~i~~w~~~~~~~~~~~~~ 297 (302)
..+.+||+... .|..... .........+.+ ++++++.|+. +.+.+||.. ..+|.+...
T Consensus 215 ~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~-~~~W~~~~~ 280 (306)
T 3ii7_A 215 LDNVEYYDIKLN--EWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTE-TDKWVANSK 280 (306)
T ss_dssp BCCEEEEETTTT--EEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETT-TTEEEEEEE
T ss_pred CceEEEeeCCCC--cEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCC-CCeEEeCCC
Confidence 35778887653 3532110 111111222333 6778888763 246778764 568988754
No 289
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.44 E-value=0.52 Score=44.58 Aligned_cols=202 Identities=10% Similarity=-0.058 Sum_probs=97.6
Q ss_pred eeEEEEccCCCEEEEee-CCCcEEEEeecCCC--ceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCC
Q 022111 14 VHDVAMDFYGKRLATAS-SDSSIKIIGLSNSA--SQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQN 90 (302)
Q Consensus 14 v~~~~~s~~~~~l~s~~-~d~~v~lw~~~~~~--~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~ 90 (302)
+..++|++.+..|+.+. ..+.|+.+++.... ......+.........|++... .++++++-...+.|.+.++....
T Consensus 408 p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~-~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 408 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI-HSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp CCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS-SSBCEECCTTTSCEEEEBSSSCC
T ss_pred eEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee-CCcEEEEeccCCeEEEEecCCCc
Confidence 45677887665555443 45778888775310 0111111111112345666432 35666666677889888875432
Q ss_pred ceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecC-CcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeec
Q 022111 91 DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD-GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGL 169 (302)
Q Consensus 91 ~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d-~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 169 (302)
. ...+.........+++.|.. +.++.+-... +.|..+++... .. ..+..........|+|+|..
T Consensus 487 ~---~~l~~~~~~~P~giavDp~~-g~ly~td~~~~~~I~~~~~dG~--~~-~~l~~~~l~~PnGlavd~~~-------- 551 (699)
T 1n7d_A 487 R---KTLFREQGSKPRAIVVDPVH-GFMYWTDWGTPAKIKKGGLNGV--DI-YSLVTENIQWPNGITLDLLS-------- 551 (699)
T ss_dssp E---EEECCCSSCCCCCEECCSSS-SCCEECCCSSSCCEEBCCSSSC--CC-CEESCSSCSSCCCEEECTTT--------
T ss_pred e---EEEEeCCCCCcceEEEccCC-CcEEEcccCCCCeEEEEeCCCC--Ce-eEEEeCCCCCccEEEEeccC--------
Confidence 1 11122223456788888863 3333332222 55655544311 11 11110111223456676643
Q ss_pred ccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEec
Q 022111 170 GLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCA 243 (302)
Q Consensus 170 ~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~ 243 (302)
+.++++-+..+.|.++|+..... ..+....+.-.....|++..+ ..+++-...+.|..++..
T Consensus 552 -----~~LY~aD~~~~~I~~~d~dG~~~--~~~~~~~~~~~~P~glavd~~-----~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 552 -----GRLYWVDSKLHSISSIDVNGGNR--KTILEDEKRLAHPFSLAVFED-----KVFWTDIINEAIFSANRL 613 (699)
T ss_dssp -----CCEEEEETTTTEEEEECSSSSCC--EEECCCSSSCSSCCCCEEETT-----EEEEECSTTTCEEEEETT
T ss_pred -----CEEEEEecCCCeEEEEccCCCce--EEEEecCCcCCCceEeEEECC-----EEEEEeCCCCeEEEEEcc
Confidence 35566666677888888764311 111111111112234444332 455666667788888753
No 290
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.43 E-value=2.7 Score=39.39 Aligned_cols=61 Identities=15% Similarity=0.232 Sum_probs=36.5
Q ss_pred CEEEEEeCCCeEEEEEcCCCCceeEEEEecCCCC----------Ce-eEEEecCCCCCcEEEEEecCCcEEEEEecCCC
Q 022111 70 SILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKS----------SV-NSIAWAPHELGLSLACGSSDGNISVFTATADG 137 (302)
Q Consensus 70 ~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~----------~i-~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~ 137 (302)
..|+.++.++.|.-+|..++. .+.++..... .+ ..+++. +..|+.++.|+.+..+|..++.
T Consensus 67 g~vyv~~~~~~v~AlD~~tG~---~~W~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~v~~~dg~l~alD~~tG~ 138 (668)
T 1kv9_A 67 GVIYTSMSWSRVIAVDAASGK---ELWRYDPEVAKVKARTSCCDAVNRGVALW----GDKVYVGTLDGRLIALDAKTGK 138 (668)
T ss_dssp TEEEEEEGGGEEEEEETTTCC---EEEEECCCCCGGGGGGCTTCSCCCCCEEE----BTEEEEECTTSEEEEEETTTCC
T ss_pred CEEEEECCCCeEEEEECCCCh---hceEECCCCCccccccccccCCccceEEE----CCEEEEEcCCCEEEEEECCCCC
Confidence 466677788888889987764 2333322211 01 112222 2367888889999998876543
No 291
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.06 E-value=5.5 Score=39.96 Aligned_cols=76 Identities=17% Similarity=0.076 Sum_probs=46.0
Q ss_pred ccceeEEEEccC------CCEEEEeeC-CCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEE
Q 022111 11 EDTVHDVAMDFY------GKRLATASS-DSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVII 83 (302)
Q Consensus 11 ~~~v~~~~~s~~------~~~l~s~~~-d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~i 83 (302)
...|.++++.+. ++++|.|.. |++|+|+++..-.......+.+ +....++++..-....+|..|-.||.+.-
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~~ 631 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG-EIIPRSILMTTFESSHYLLCALGDGALFY 631 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCS-SCCEEEEEEEEETTEEEEEEEETTSEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEEE
Confidence 346888888753 479999996 9999999986422112223322 12334444332112356788888888776
Q ss_pred EEcC
Q 022111 84 WKEG 87 (302)
Q Consensus 84 wd~~ 87 (302)
+.+.
T Consensus 632 ~~~d 635 (1158)
T 3ei3_A 632 FGLN 635 (1158)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6553
No 292
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.00 E-value=2.2 Score=35.15 Aligned_cols=151 Identities=20% Similarity=0.300 Sum_probs=72.4
Q ss_pred CCCEEEEeeCCC-----cEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCC-----eEEEEEcCCCCc
Q 022111 22 YGKRLATASSDS-----SIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDG-----QVIIWKEGNQND 91 (302)
Q Consensus 22 ~~~~l~s~~~d~-----~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~-----~i~iwd~~~~~~ 91 (302)
+++.++.||.++ .+.+||........+..+......-..+.+ ++++++.|+.++ .+.+||+.+ ..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~d~~~-~~ 135 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL----NGLLYAVGGFDGSTGLSSVEAYNIKS-NE 135 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE----TTEEEEEEEECSSCEEEEEEEEETTT-TE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE----CCEEEEEcCCCCCccCceEEEEeCCC-Ce
Confidence 567777777553 477788765544443333211111112222 257777777653 466778765 34
Q ss_pred eeEEEEecCCCCCeeEEEecCCCCCcEEEEEecC-------CcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCC
Q 022111 92 WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD-------GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPG 164 (302)
Q Consensus 92 ~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d-------~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 164 (302)
|..+.........-.++.+ + +.+++.|+.+ ..+..||..+ ..|...............+.+
T Consensus 136 W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~yd~~~-~~W~~~~~~p~~r~~~~~~~~------- 203 (302)
T 2xn4_A 136 WFHVAPMNTRRSSVGVGVV--G--GLLYAVGGYDVASRQCLSTVECYNATT-NEWTYIAEMSTRRSGAGVGVL------- 203 (302)
T ss_dssp EEEECCCSSCCBSCEEEEE--T--TEEEEECCEETTTTEECCCEEEEETTT-TEEEEECCCSSCCBSCEEEEE-------
T ss_pred EeecCCCCCcccCceEEEE--C--CEEEEEeCCCCCCCccccEEEEEeCCC-CcEEECCCCccccccccEEEE-------
Confidence 5544332221111122222 2 4456666543 3466777653 234322100000000111111
Q ss_pred ceeecccCCCceeEEEeeCC-----CcEEEEEEecCccc
Q 022111 165 ALVGLGLLDPVQKLASCGCD-----NTVKVWKMYNGIWK 198 (302)
Q Consensus 165 ~~~~~~~~~~~~~l~s~~~D-----~~v~iwd~~~~~~~ 198 (302)
+++.++.||.+ +.+.+||+.+..|.
T Consensus 204 ---------~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 233 (302)
T 2xn4_A 204 ---------NNLLYAVGGHDGPLVRKSVEVYDPTTNAWR 233 (302)
T ss_dssp ---------TTEEEEECCBSSSSBCCCEEEEETTTTEEE
T ss_pred ---------CCEEEEECCCCCCcccceEEEEeCCCCCEe
Confidence 24667777664 36888998877664
No 293
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.97 E-value=2.3 Score=35.25 Aligned_cols=237 Identities=15% Similarity=0.202 Sum_probs=112.3
Q ss_pred ccCCCEEEEeeCC----CcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeC----C-----CeEEEEEc
Q 022111 20 DFYGKRLATASSD----SSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSY----D-----GQVIIWKE 86 (302)
Q Consensus 20 s~~~~~l~s~~~d----~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~----D-----~~i~iwd~ 86 (302)
..+++.++.||.+ ..+.+||........+..+......- +++.. ++.+++.|+. + ..+.+||+
T Consensus 22 ~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~~d~ 97 (308)
T 1zgk_A 22 KVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-AGCVV---GGLLYAVGGRNNSPDGNTDSSALDCYNP 97 (308)
T ss_dssp CCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE---TTEEEEECCEEEETTEEEECCCEEEEET
T ss_pred CCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-eEEEE---CCEEEEECCCcCCCCCCeecceEEEECC
Confidence 4456777778742 35788887654443332222111111 22222 2567777765 2 35777887
Q ss_pred CCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecC-----CcEEEEEecCCCCeeeee-ecccCCCCeEEEEeCCC
Q 022111 87 GNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD-----GNISVFTATADGGWDTTR-IDQAHPVGVTSVSWAPA 160 (302)
Q Consensus 87 ~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d-----~~v~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~ 160 (302)
.+. .|..+..+......-..+.+ + +.+++.|+.+ ..+..||..+. .|.... +. ........+.+
T Consensus 98 ~~~-~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~p-~~r~~~~~~~~--- 167 (308)
T 1zgk_A 98 MTN-QWSPCAPMSVPRNRIGVGVI--D--GHIYAVGGSHGCIHHNSVERYEPERD-EWHLVAPML-TRRIGVGVAVL--- 167 (308)
T ss_dssp TTT-EEEECCCCSSCCBTCEEEEE--T--TEEEEECCEETTEECCCEEEEETTTT-EEEECCCCS-SCCBSCEEEEE---
T ss_pred CCC-eEeECCCCCcCccccEEEEE--C--CEEEEEcCCCCCcccccEEEECCCCC-eEeECCCCC-ccccceEEEEE---
Confidence 653 45444322221111222223 2 4566666543 35666766432 333211 00 00000111111
Q ss_pred CCCCceeecccCCCceeEEEeeCC-----CcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecC-
Q 022111 161 MAPGALVGLGLLDPVQKLASCGCD-----NTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQD- 234 (302)
Q Consensus 161 ~~~~~~~~~~~~~~~~~l~s~~~D-----~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D- 234 (302)
++..++.||.+ +.+.+||+.+..|... ..+......-..+.+ + +..++.|+.+
T Consensus 168 -------------~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~--~~~p~~r~~~~~~~~--~----~~iyv~GG~~~ 226 (308)
T 1zgk_A 168 -------------NRLLYAVGGFDGTNRLNSAECYYPERNEWRMI--TAMNTIRSGAGVCVL--H----NCIYAAGGYDG 226 (308)
T ss_dssp -------------TTEEEEECCBCSSCBCCCEEEEETTTTEEEEC--CCCSSCCBSCEEEEE--T----TEEEEECCBCS
T ss_pred -------------CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeC--CCCCCccccceEEEE--C----CEEEEEeCCCC
Confidence 24566667654 4588899887766421 111111111122222 2 3567777654
Q ss_pred ----CeEEEEEeccCCcceeeeeeccCCC---cEEEEEEccCCCEEEEecC------CceEEeeecCCceEEEeeec
Q 022111 235 ----GTVVIWTCAKEGEQWEGRVLKDFKT---PVWSVSWSLTGNLLAVADA------NNVTLWKEAVDGEWQQVSVV 298 (302)
Q Consensus 235 ----~~i~iwd~~~~~~~~~~~~~~~~~~---~v~~~~~spdg~~la~~~~------d~i~~w~~~~~~~~~~~~~~ 298 (302)
..+.+||+... .|... ..... ....+. -++++++.|+. +.+.+||.. ..+|.+....
T Consensus 227 ~~~~~~v~~yd~~~~--~W~~~--~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~ 296 (308)
T 1zgk_A 227 QDQLNSVERYDVETE--TWTFV--APMKHRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPD-TDTWSEVTRM 296 (308)
T ss_dssp SSBCCCEEEEETTTT--EEEEC--CCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETT-TTEEEEEEEC
T ss_pred CCccceEEEEeCCCC--cEEEC--CCCCCCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCC-CCEEeecCCC
Confidence 45888887653 35321 11111 112222 26778788753 246778764 5689887543
No 294
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=93.82 E-value=2.9 Score=35.90 Aligned_cols=65 Identities=20% Similarity=0.183 Sum_probs=42.3
Q ss_pred ceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEcc-CCCEEEEecCC
Q 022111 211 WVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSL-TGNLLAVADAN 279 (302)
Q Consensus 211 ~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~la~~~~d 279 (302)
.-+.|+|+||+ ....++-+..+.|..|+++..+.....+.. ......-.++..+ +|++.+++.-+
T Consensus 222 ~pNGia~spDg---~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 222 FANGINISPDG---KYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp SEEEEEECTTS---SEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred ccCcceECCCC---CEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 35889999996 245666667889999998743222111222 3344567788888 59888766434
No 295
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=93.58 E-value=2.6 Score=34.71 Aligned_cols=189 Identities=14% Similarity=0.146 Sum_probs=89.7
Q ss_pred CCCEEEEeeCC----CcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCC------CeEEEEEcCCCCc
Q 022111 22 YGKRLATASSD----SSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYD------GQVIIWKEGNQND 91 (302)
Q Consensus 22 ~~~~l~s~~~d----~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D------~~i~iwd~~~~~~ 91 (302)
+++.++.||.+ ..+.+||........+..+......-..+.+ ++++++.|+.+ ..+.+||+.+. .
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~d~~~~-~ 129 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA----EGKIYTSGGSEVGNSALYLFECYDTRTE-S 129 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE----TTEEEEECCBBTTBSCCCCEEEEETTTT-E
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE----CCEEEEECCCCCCCcEeeeEEEEeCCCC-c
Confidence 56777788755 5677888765544444333211111112222 25777787765 45788888653 4
Q ss_pred eeEEEEecCCCCCeeEEEecCCCCCcEEEEEec---------CCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCC
Q 022111 92 WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSS---------DGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMA 162 (302)
Q Consensus 92 ~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~---------d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 162 (302)
|..+..+......-..+.+ + +.+++.|+. -..+.+||..+. .|...............+..
T Consensus 130 W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~-~W~~~~~~p~~r~~~~~~~~----- 199 (306)
T 3ii7_A 130 WHTKPSMLTQRCSHGMVEA--N--GLIYVCGGSLGNNVSGRVLNSCEVYDPATE-TWTELCPMIEARKNHGLVFV----- 199 (306)
T ss_dssp EEEECCCSSCCBSCEEEEE--T--TEEEEECCEESCTTTCEECCCEEEEETTTT-EEEEECCCSSCCBSCEEEEE-----
T ss_pred eEeCCCCcCCcceeEEEEE--C--CEEEEECCCCCCCCcccccceEEEeCCCCC-eEEECCCccchhhcceEEEE-----
Confidence 5544332211111122222 2 445666653 234667776532 34322100000000111111
Q ss_pred CCceeecccCCCceeEEEeeCC-----CcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecC---
Q 022111 163 PGALVGLGLLDPVQKLASCGCD-----NTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQD--- 234 (302)
Q Consensus 163 ~~~~~~~~~~~~~~~l~s~~~D-----~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D--- 234 (302)
+++.++.||.+ ..+.+||+.+..|... ..+........++.+ + +..++.|+.+
T Consensus 200 -----------~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~--~~~p~~r~~~~~~~~--~----~~i~v~GG~~~~~ 260 (306)
T 3ii7_A 200 -----------KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMV--SPMPWKGVTVKCAAV--G----SIVYVLAGFQGVG 260 (306)
T ss_dssp -----------TTEEEEECCEETTEEBCCEEEEETTTTEEEEC--CCCSCCBSCCEEEEE--T----TEEEEEECBCSSS
T ss_pred -----------CCEEEEEeCCCCCCCCceEEEeeCCCCcEEEC--CCCCCCccceeEEEE--C----CEEEEEeCcCCCe
Confidence 24566666653 3578899887766422 111111111122222 2 3567777654
Q ss_pred --CeEEEEEecc
Q 022111 235 --GTVVIWTCAK 244 (302)
Q Consensus 235 --~~i~iwd~~~ 244 (302)
..+.+||...
T Consensus 261 ~~~~~~~yd~~~ 272 (306)
T 3ii7_A 261 RLGHILEYNTET 272 (306)
T ss_dssp BCCEEEEEETTT
T ss_pred eeeeEEEEcCCC
Confidence 4577777654
No 296
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=92.87 E-value=5.6 Score=36.45 Aligned_cols=55 Identities=15% Similarity=0.236 Sum_probs=30.6
Q ss_pred cCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCce
Q 022111 233 QDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGE 291 (302)
Q Consensus 233 ~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~ 291 (302)
.++.|..||..+.+..|.... ..++++..+...+.++.+++.+ .++.+|......
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~----~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWE----KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKE 497 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEE----SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred CCCeEEEEECCCCCEEEEecC----CCCccceeEEECCCEEEEEcCCCeEEEEECCCCCE
Confidence 357788888876554454322 1222332333345556566666 688898754443
No 297
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=92.80 E-value=4.2 Score=34.81 Aligned_cols=190 Identities=13% Similarity=0.237 Sum_probs=104.2
Q ss_pred EEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEecCCC--CC----cEEEEEec--CCcEEEEEecCC-CCeee
Q 022111 71 ILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHE--LG----LSLACGSS--DGNISVFTATAD-GGWDT 141 (302)
Q Consensus 71 ~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~~pd~--~~----~~l~sg~~--d~~v~~~~~~~~-~~~~~ 141 (302)
+++.....+-+.+||+. ++ .++.+.. +.++.++.-|+- .+ ..+++... +++|.+|++... +.+
T Consensus 42 ~ii~t~k~~gL~Vydl~-G~---~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l-- 113 (355)
T 3amr_A 42 KLITTNKKSGLVVYSLD-GK---MLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL-- 113 (355)
T ss_dssp EEEEEETTTEEEEEETT-SC---EEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCE--
T ss_pred EEEEEcCCCCEEEEcCC-Cc---EEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCce--
Confidence 45555677889999994 32 4555542 567777776630 01 12444444 689999988532 222
Q ss_pred eeeccc-----CC-CCeEEEEe--CCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEec---CccccccccccccCCC
Q 022111 142 TRIDQA-----HP-VGVTSVSW--APAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYN---GIWKMDCFPALQMHSD 210 (302)
Q Consensus 142 ~~~~~~-----h~-~~v~~~~~--~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~---~~~~~~~~~~~~~h~~ 210 (302)
..+... .. ..+..++. +|.. ...+++....++.+..|++.. +....+.+++|.. .+
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~------------g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gs 180 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKT------------GKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NS 180 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTT------------CCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SS
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCC------------CcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CC
Confidence 121100 00 12222333 3321 112566777789999999853 2122234455543 34
Q ss_pred ceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcc-eeeeee-----ccCCCcEEEEEE--ccCCC-EEEEecC--C
Q 022111 211 WVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQ-WEGRVL-----KDFKTPVWSVSW--SLTGN-LLAVADA--N 279 (302)
Q Consensus 211 ~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~-~~~~~~-----~~~~~~v~~~~~--spdg~-~la~~~~--d 279 (302)
.+..+...+.. .+|..+-+|.. ||.+.-.... ....+. ......+-.|++ .++|+ +|++++. +
T Consensus 181 q~EgcvvDd~~----g~Lyv~eEd~G--Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~ 254 (355)
T 3amr_A 181 QTEGMAADDEY----GRLYIAEEDEA--IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNS 254 (355)
T ss_dssp CEEEEEEETTT----TEEEEEETTTE--EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGT
T ss_pred CcceEEEcCCC----CeEEEecccce--EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCC
Confidence 57777888764 67888888866 5555422110 001111 223345777877 56666 6666653 3
Q ss_pred ceEEeeec
Q 022111 280 NVTLWKEA 287 (302)
Q Consensus 280 ~i~~w~~~ 287 (302)
...+|+..
T Consensus 255 s~~Vydr~ 262 (355)
T 3amr_A 255 SYAIYDRQ 262 (355)
T ss_dssp EEEEEESS
T ss_pred EEEEEECC
Confidence 79999985
No 298
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=92.78 E-value=3.8 Score=34.23 Aligned_cols=223 Identities=8% Similarity=-0.063 Sum_probs=114.0
Q ss_pred CCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCc-eeEEEEecCCCCCeeEEEe
Q 022111 32 DSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQND-WTQAHTFNDHKSSVNSIAW 110 (302)
Q Consensus 32 d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~-~~~~~~~~~h~~~i~~l~~ 110 (302)
...|+..++....... .+. .......+.|.+. .+.++.+-...+.|..+++..... ......+.........+++
T Consensus 9 ~~~I~~i~~~~~~~~~--~~~-~~~~p~g~~~d~~-~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glav 84 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTS--LIP-NLRNVVALDTEVA-SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 84 (316)
T ss_dssp BSSEEEEETTSCCCEE--EEC-SCSSEEEEEEETT-TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEE
T ss_pred CCeEEEEECCCcceEe--hhc-CCCceEEEEEEeC-CCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEE
Confidence 4568888876543222 222 2335678899754 356666767788999998764100 0011112222244578888
Q ss_pred cCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCC-CcEEE
Q 022111 111 APHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCD-NTVKV 189 (302)
Q Consensus 111 ~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D-~~v~i 189 (302)
.+.. +.+..+-...+.|.+++.... .....+. ........++..|.. +..+++.... +.|..
T Consensus 85 d~~~-~~ly~~d~~~~~I~~~~~~g~--~~~~~~~-~~~~~P~~iavdp~~-------------g~ly~~d~~~~~~I~~ 147 (316)
T 1ijq_A 85 DWIH-SNIYWTDSVLGTVSVADTKGV--KRKTLFR-ENGSKPRAIVVDPVH-------------GFMYWTDWGTPAKIKK 147 (316)
T ss_dssp ETTT-TEEEEEETTTTEEEEEETTSS--SEEEEEE-CTTCCEEEEEEETTT-------------TEEEEEECSSSCEEEE
T ss_pred eecC-CeEEEEECCCCEEEEEeCCCC--ceEEEEE-CCCCCcceEEeCCCC-------------CEEEEEccCCCCeEEE
Confidence 7542 344455456678888776421 1111111 112234566666532 3444554333 56777
Q ss_pred EEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeec--cCCCcEEEEEEc
Q 022111 190 WKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLK--DFKTPVWSVSWS 267 (302)
Q Consensus 190 wd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~s 267 (302)
.++..... ..+ ....-.+-+.|+++|++ +...++-+..+.|..+|++.... ..+.. .......++++.
T Consensus 148 ~~~dG~~~--~~~--~~~~~~~P~gla~d~~~---~~lY~~D~~~~~I~~~d~dg~~~---~~~~~~~~~~~~P~giav~ 217 (316)
T 1ijq_A 148 GGLNGVDI--YSL--VTENIQWPNGITLDLLS---GRLYWVDSKLHSISSIDVNGGNR---KTILEDEKRLAHPFSLAVF 217 (316)
T ss_dssp EETTSCCE--EEE--ECSSCSCEEEEEEETTT---TEEEEEETTTTEEEEEETTSCSC---EEEEECTTTTSSEEEEEEE
T ss_pred EcCCCCCe--EEE--EECCCCCceEEEEeccC---CEEEEEECCCCeEEEEecCCCce---EEEeecCCccCCcEEEEEE
Confidence 76643211 111 01122456899999875 35566666778899999864321 11211 112335677774
Q ss_pred cCCCEEEEecCC-ceEEeee
Q 022111 268 LTGNLLAVADAN-NVTLWKE 286 (302)
Q Consensus 268 pdg~~la~~~~d-~i~~w~~ 286 (302)
.+.++.+.... .|..++.
T Consensus 218 -~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 218 -EDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp -TTEEEEEETTTTEEEEEET
T ss_pred -CCEEEEEECCCCeEEEEeC
Confidence 34444433333 5666664
No 299
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=92.67 E-value=3.6 Score=33.74 Aligned_cols=151 Identities=13% Similarity=0.227 Sum_probs=75.6
Q ss_pred CCCEEEEeeCC-----CcEEEEeecCCC---ceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCC-----CeEEEEEcCC
Q 022111 22 YGKRLATASSD-----SSIKIIGLSNSA---SQHLATLKGHRGPVWQVAWAHPKFGSILASCSYD-----GQVIIWKEGN 88 (302)
Q Consensus 22 ~~~~l~s~~~d-----~~v~lw~~~~~~---~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D-----~~i~iwd~~~ 88 (302)
+++.++.||.+ ..+.+||..... ...+..+......- ++... ++++++.|+.+ ..+.+||+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~-~~~~~---~~~lyv~GG~~~~~~~~~~~~~d~~~ 137 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLA-GATTL---GDMIYVSGGFDGSRRHTSMERYDPNI 137 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSC-EEEEE---TTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccce-eEEEE---CCEEEEEcccCCCcccceEEEEcCCC
Confidence 56777778755 458888876655 44443332211111 22222 25777777654 3577888765
Q ss_pred CCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecC-----CcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCC
Q 022111 89 QNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD-----GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAP 163 (302)
Q Consensus 89 ~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d-----~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 163 (302)
..|..+.........-.++.+ + +.+++.|+.+ ..+..||..+. .|...............+.+
T Consensus 138 -~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~~------ 205 (301)
T 2vpj_A 138 -DQWSMLGDMQTAREGAGLVVA--S--GVIYCLGGYDGLNILNSVEKYDPHTG-HWTNVTPMATKRSGAGVALL------ 205 (301)
T ss_dssp -TEEEEEEECSSCCBSCEEEEE--T--TEEEEECCBCSSCBCCCEEEEETTTT-EEEEECCCSSCCBSCEEEEE------
T ss_pred -CeEEECCCCCCCcccceEEEE--C--CEEEEECCCCCCcccceEEEEeCCCC-cEEeCCCCCcccccceEEEE------
Confidence 346655443322111222222 2 4566676654 35667776532 34322100000000111111
Q ss_pred CceeecccCCCceeEEEeeCC-----CcEEEEEEecCccc
Q 022111 164 GALVGLGLLDPVQKLASCGCD-----NTVKVWKMYNGIWK 198 (302)
Q Consensus 164 ~~~~~~~~~~~~~~l~s~~~D-----~~v~iwd~~~~~~~ 198 (302)
++..++.||.+ ..+.+||+.+..|.
T Consensus 206 ----------~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 206 ----------NDHIYVVGGFDGTAHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp ----------TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred ----------CCEEEEEeCCCCCcccceEEEEeCCCCcEE
Confidence 24667777664 46889998877664
No 300
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=92.45 E-value=6.4 Score=36.07 Aligned_cols=49 Identities=14% Similarity=0.127 Sum_probs=30.3
Q ss_pred cEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEe
Q 022111 226 STIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVA 276 (302)
Q Consensus 226 ~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~ 276 (302)
..+..++.|+.|+.+|.++.+..|...+..... ...+.|.++|++++..
T Consensus 476 g~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~--~~p~~~~~~G~~yv~~ 524 (571)
T 2ad6_A 476 GLVWYATLDGYLKALDNKDGKELWNFKMPSGGI--GSPMTYSFKGKQYIGS 524 (571)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSSCCC--SCCEEEEETTEEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcE--eeeEEEEECCEEEEEE
Confidence 567778999999999998765555433221111 1223466888766544
No 301
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=92.41 E-value=4.5 Score=34.26 Aligned_cols=161 Identities=7% Similarity=0.113 Sum_probs=83.5
Q ss_pred EEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecC----CCC--CeeEEEe---cCCCCCcEEEEEe------
Q 022111 59 WQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND----HKS--SVNSIAW---APHELGLSLACGS------ 123 (302)
Q Consensus 59 ~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~----h~~--~i~~l~~---~pd~~~~~l~sg~------ 123 (302)
-+++|... .+.++++.-..++|..||...+.. ..+ .+.+ .+. .+..|.| -|+ +.++++..
T Consensus 16 E~~~wd~~-~g~~~vs~l~~g~V~~~~~~~~~~-~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~--grL~vv~~~~~af~ 90 (334)
T 2p9w_A 16 EDTIYDRT-RQVFYQSNLYKGRIEVYNPKTQSH-FNV-VIDGASSNGDGEQQMSGLSLLTHDNS--KRLFAVMKNAKSFN 90 (334)
T ss_dssp SCEEEETT-TTEEEEEETTTTEEEEECTTTCCE-EEE-CCTTTCCSSCCSEEEEEEEESSSSSC--CEEEEEEEETTTTC
T ss_pred cCccCcCC-CCEEEEEeccCCEEEEEcCCCCeE-EEE-ecCCccccCCCcceeeEEEEeccCCC--CcEEEEEccccccc
Confidence 35788543 466666666899999999864321 222 3332 111 3578888 465 55666543
Q ss_pred -------cCCcEEEEEec---CCCCeeeeeecc---c-------CCCCeEEEEeCCCCCCCceeecccCCCceeEEEeeC
Q 022111 124 -------SDGNISVFTAT---ADGGWDTTRIDQ---A-------HPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGC 183 (302)
Q Consensus 124 -------~d~~v~~~~~~---~~~~~~~~~~~~---~-------h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 183 (302)
.++.+..||+. +........+.. + -......++..++ |...++++.
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~--------------GnaYVt~s~ 156 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRD--------------GNSYVAFAL 156 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTT--------------SCEEEEEEE
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCC--------------CCEEEeCCC
Confidence 26778889876 333222122110 0 0112444554443 355555555
Q ss_pred C-CcEEEEEEecCccccccc---cccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEecc
Q 022111 184 D-NTVKVWKMYNGIWKMDCF---PALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAK 244 (302)
Q Consensus 184 D-~~v~iwd~~~~~~~~~~~---~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~ 244 (302)
. +.|...+.... ..... ..........+.|+++|++ +.|+....++.|.-+|+..
T Consensus 157 ~~~~I~rV~pdG~--~~~~~~~~~~~~~~~~G~nGIv~~pdg----~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 157 GMPAIARVSADGK--TVSTFAWESGNGGQRPGYSGITFDPHS----NKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp SSCEEEEECTTSC--CEEEEEECCCCSSSCCSCSEEEEETTT----TEEEEESSSSSEEEEECSS
T ss_pred CCCeEEEEeCCCC--EEeeeeecCCCcccccCcceEEEeCCC----CEEEEEcCCCeEEEEcCCC
Confidence 4 44333332211 00000 0001112335789999996 4555554499999999874
No 302
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=92.41 E-value=8 Score=37.07 Aligned_cols=201 Identities=10% Similarity=-0.021 Sum_probs=99.4
Q ss_pred ceeEEEEccCCCEEE-EeeCCCcEEEEeecCCCc--eEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCC
Q 022111 13 TVHDVAMDFYGKRLA-TASSDSSIKIIGLSNSAS--QHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQ 89 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~-s~~~d~~v~lw~~~~~~~--~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~ 89 (302)
.+..++|++....|+ +-...+.|+.+++..... .....+.........|++... .++++++-...+.|.+.++...
T Consensus 425 ~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~-~~~LY~tD~~~~~I~v~~ldG~ 503 (791)
T 3m0c_C 425 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI-HSNIYWTDSVLGTVSVADTKGV 503 (791)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT-TTEEEEEETTTTEEEEEETTSS
T ss_pred ceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeec-CCcEEEEecCCCeEEEEeCCCC
Confidence 456778887544444 444556777777753210 111222222334557777543 2467777778889999988654
Q ss_pred CceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecC--CcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCcee
Q 022111 90 NDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD--GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALV 167 (302)
Q Consensus 90 ~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d--~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 167 (302)
.. .. .+.........|++.|.. +. |...... ..|...++. +......+. ........|+..+..
T Consensus 504 ~~-~~--l~~~~l~~P~gIaVDp~~-g~-LYwtD~g~~~~I~~~~~d--G~~~~~lv~-~~l~~P~GLavD~~~------ 569 (791)
T 3m0c_C 504 KR-KT--LFRENGSKPRAIVVDPVH-GF-MYWTDWGTPAKIKKGGLN--GVDIYSLVT-ENIQWPNGITLDLLS------ 569 (791)
T ss_dssp SE-EE--EEECTTCCEEEEEEETTT-TE-EEEEECSSSCEEEEEETT--SCCEEEEEC-SSCSCEEEEEEETTT------
T ss_pred eE-EE--EEeCCCCCcceEEEecCC-CC-EEEecCCCCCeEEEEecC--CCceEEEEe-CCCCCceEEEEecCC------
Confidence 22 11 122234457899998863 33 4433332 456655543 221111111 122234556665432
Q ss_pred ecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEe
Q 022111 168 GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC 242 (302)
Q Consensus 168 ~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~ 242 (302)
+.++++-.....|...++...... ..+.. .+.-.....|++..+ ..+++-...+.|...|.
T Consensus 570 -------~~LYwaD~~~~~I~~~d~dG~~~~-~v~~~-~~~l~~P~glav~~~-----~lYwtD~~~~~I~~~dk 630 (791)
T 3m0c_C 570 -------GRLYWVDSKLHSISSIDVNGGNRK-TILED-EKRLAHPFSLAVFED-----KVFWTDIINEAIFSANR 630 (791)
T ss_dssp -------TEEEEEETTTTEEEEEETTSCSCE-EEEEC-TTTTSSEEEEEEETT-----EEEEEETTTTEEEEEET
T ss_pred -------CeEEEEeCCCCcEEEEecCCCceE-EEecC-CCccCCCCEEEEeCC-----EEEEEECCCCEEEEEeC
Confidence 345555556677888887543211 11110 011122345555332 44555556666666654
No 303
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=92.39 E-value=5.2 Score=36.77 Aligned_cols=22 Identities=14% Similarity=0.071 Sum_probs=18.5
Q ss_pred ceeEEEeeCCCcEEEEEEecCc
Q 022111 175 VQKLASCGCDNTVKVWKMYNGI 196 (302)
Q Consensus 175 ~~~l~s~~~D~~v~iwd~~~~~ 196 (302)
+.+++.++.|+.++.||.++++
T Consensus 497 gglvf~g~~dg~l~A~D~~tG~ 518 (582)
T 1flg_A 497 GNLVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp TTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEECCCCcEEEEECCCCC
Confidence 4567779999999999998874
No 304
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=92.37 E-value=6.8 Score=36.19 Aligned_cols=49 Identities=10% Similarity=0.196 Sum_probs=31.5
Q ss_pred cEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCE-EEEe
Q 022111 226 STIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNL-LAVA 276 (302)
Q Consensus 226 ~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~-la~~ 276 (302)
..+..++.|+.|+.||.++.+..|..++..... ..-+.|..+|++ +++.
T Consensus 485 g~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~--~~P~~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 485 DLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAI--GYPMTYTHKGTQYVAIY 534 (599)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSSCCC--SCCEEEEETTEEEEEEE
T ss_pred CEEEEECCCCeEEEEECCCCCEEEEeeCCCCcE--eccEEEEeCCEEEEEEE
Confidence 567779999999999998876666544322221 122556678874 4443
No 305
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=92.19 E-value=4.5 Score=33.74 Aligned_cols=203 Identities=10% Similarity=-0.043 Sum_probs=105.3
Q ss_pred ceeEEEEccCCCEEE-EeeCCCcEEEEeecCCC--ceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCC
Q 022111 13 TVHDVAMDFYGKRLA-TASSDSSIKIIGLSNSA--SQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQ 89 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~-s~~~d~~v~lw~~~~~~--~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~ 89 (302)
....+.|++.+..|. +-...+.|+.++..... ......+...-.....+++... .++++++-...+.|.+.++...
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~-~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI-HSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT-TTEEEEEETTTTEEEEEETTSS
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec-CCeEEEEECCCCEEEEEeCCCC
Confidence 345788887655454 44456788888875410 0111112222223467787543 3566677677889999987643
Q ss_pred CceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecC-CcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceee
Q 022111 90 NDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD-GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVG 168 (302)
Q Consensus 90 ~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d-~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 168 (302)
.. ..+ +.........+++.|.. +.++.+.... +.|..++.. +........ ........++++|+.
T Consensus 110 ~~-~~~--~~~~~~~P~~iavdp~~-g~ly~~d~~~~~~I~~~~~d--G~~~~~~~~-~~~~~P~gla~d~~~------- 175 (316)
T 1ijq_A 110 KR-KTL--FRENGSKPRAIVVDPVH-GFMYWTDWGTPAKIKKGGLN--GVDIYSLVT-ENIQWPNGITLDLLS------- 175 (316)
T ss_dssp SE-EEE--EECTTCCEEEEEEETTT-TEEEEEECSSSCEEEEEETT--SCCEEEEEC-SSCSCEEEEEEETTT-------
T ss_pred ce-EEE--EECCCCCcceEEeCCCC-CEEEEEccCCCCeEEEEcCC--CCCeEEEEE-CCCCCceEEEEeccC-------
Confidence 21 111 22233567899998863 4444443222 566665543 221111111 112235677777643
Q ss_pred cccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEec
Q 022111 169 LGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCA 243 (302)
Q Consensus 169 ~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~ 243 (302)
+.++++-+..+.|..+|+..... ..+......-..-..|++.. +..+.+-...+.|..++..
T Consensus 176 ------~~lY~~D~~~~~I~~~d~dg~~~--~~~~~~~~~~~~P~giav~~-----~~ly~~d~~~~~V~~~~~~ 237 (316)
T 1ijq_A 176 ------GRLYWVDSKLHSISSIDVNGGNR--KTILEDEKRLAHPFSLAVFE-----DKVFWTDIINEAIFSANRL 237 (316)
T ss_dssp ------TEEEEEETTTTEEEEEETTSCSC--EEEEECTTTTSSEEEEEEET-----TEEEEEETTTTEEEEEETT
T ss_pred ------CEEEEEECCCCeEEEEecCCCce--EEEeecCCccCCcEEEEEEC-----CEEEEEECCCCeEEEEeCC
Confidence 35566666777899988764311 11111111122345666642 2556666667778777753
No 306
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=92.13 E-value=6.4 Score=35.39 Aligned_cols=161 Identities=14% Similarity=0.143 Sum_probs=82.2
Q ss_pred ceeEEEEcc-CCCEEEEeeC-CCcEEEEeecCCCceEEEEecC-cccCeEEEEe-------eCCCCCCEEEEEeCCC---
Q 022111 13 TVHDVAMDF-YGKRLATASS-DSSIKIIGLSNSASQHLATLKG-HRGPVWQVAW-------AHPKFGSILASCSYDG--- 79 (302)
Q Consensus 13 ~v~~~~~s~-~~~~l~s~~~-d~~v~lw~~~~~~~~~~~~~~~-h~~~v~~v~~-------~~~~~~~~l~s~s~D~--- 79 (302)
....++|+| +...|..+.. .+.|++.|........+..... .......|+| .++ ++.|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~--G~~lyvad~~~~~~ 217 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADE--AEYMIVAIDYDGKG 217 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCT--TCEEEEEECCCTTG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCC--CCEEEEEeCCCCCc
Confidence 355788998 3444554443 3567777765432222211111 1224678998 753 66444444332
Q ss_pred ----eEEEEEcCCCCce------eEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEec-------CCCCee--
Q 022111 80 ----QVIIWKEGNQNDW------TQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTAT-------ADGGWD-- 140 (302)
Q Consensus 80 ----~i~iwd~~~~~~~------~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~-------~~~~~~-- 140 (302)
.+.+.+......+ ..+..+. ....++++|+. +.++++-...+.|..+|.. ....|.
T Consensus 218 ~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~----~p~giavdp~~-g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~ 292 (496)
T 3kya_A 218 DESPSVYIIKRNADGTFDDRSDIQLIAAYK----QCNGATIHPIN-GELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPI 292 (496)
T ss_dssp GGEEEEEEEECCTTSCCSTTSCEEEEEEES----CCCCEEECTTT-CCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCB
T ss_pred ccCceEEEEecCCCCceeecccceeeccCC----CceEEEEcCCC-CeEEEEECCCCEEEEEecccccccccCceeeccc
Confidence 2445543321122 1222222 23567788863 4556666677789888876 222110
Q ss_pred -------eee-ecccCCCCeEEEEeCCCCCCCceeecccCCCce-eEEEeeCCCcEEEEEEec
Q 022111 141 -------TTR-IDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQ-KLASCGCDNTVKVWKMYN 194 (302)
Q Consensus 141 -------~~~-~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~D~~v~iwd~~~ 194 (302)
... ........-..++|+|++ . ++++-+....|+.+|...
T Consensus 293 ~~~~~g~~~~l~~~~~~~~p~~ia~~p~G--------------~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 293 VKNNPNTFKQLFTIADPSWEFQIFIHPTG--------------KYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp GGGCTTTEEEEEECSSSSCCEEEEECTTS--------------SEEEEEETTTTEEEEEEEET
T ss_pred ccccccccceeEecCCCCCceEEEEcCCC--------------CEEEEEeCCCCEEEEEecCC
Confidence 001 111112234577887764 4 456666677888877653
No 307
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=92.08 E-value=5.6 Score=34.56 Aligned_cols=204 Identities=10% Similarity=-0.047 Sum_probs=104.6
Q ss_pred cceeEEEEccCCCEEEEee-CCCcEEEEeecCCC--ceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCC
Q 022111 12 DTVHDVAMDFYGKRLATAS-SDSSIKIIGLSNSA--SQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGN 88 (302)
Q Consensus 12 ~~v~~~~~s~~~~~l~s~~-~d~~v~lw~~~~~~--~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~ 88 (302)
..+..++|++.+..|.-+. ..+.|+.+++.... ......+.........|++... .++++++-...+.|.+.++..
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~-~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI-HSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETT-TTEEEEEETTTTEEEEECTTT
T ss_pred CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEec-CCceEEEECCCCeEEEEeCCC
Confidence 3466788887655555443 45777777765311 0111122222334567787642 356777777788898888765
Q ss_pred CCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEec-CCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCcee
Q 022111 89 QNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSS-DGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALV 167 (302)
Q Consensus 89 ~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~-d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 167 (302)
... ...+.........|++.|.. +.+..+-.. ...|...++. +......+. ........++++|..
T Consensus 191 ~~~---~~l~~~~~~~P~~iavdp~~-g~ly~td~~~~~~I~~~~~d--G~~~~~~~~-~~l~~P~glavd~~~------ 257 (400)
T 3p5b_L 191 VKR---KTLFRENGSKPRAIVVDPVH-GFMYWTDWGTPAKIKKGGLN--GVDIYSLVT-ENIQWPNGITLDLLS------ 257 (400)
T ss_dssp CSE---EEEEECSSCCEEEEEEETTT-TEEEEEECSSSCCEEEEETT--SCSCEEEEC-SSCSCEEEEEEETTT------
T ss_pred Cce---EEEEeCCCCCcceEEEeccc-CeEEEEeCCCCCEEEEEeCC--CCccEEEEE-CCCCceEEEEEEeCC------
Confidence 421 11122233457899998863 433333222 2566666543 211111111 112334667777643
Q ss_pred ecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEec
Q 022111 168 GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCA 243 (302)
Q Consensus 168 ~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~ 243 (302)
+.++++-+..+.|..+|+..... ..+....+.-..-..|+... +..+.+-...+.|..+|..
T Consensus 258 -------~~lY~aD~~~~~I~~~d~dG~~~--~~~~~~~~~l~~P~gl~v~~-----~~lywtd~~~~~V~~~~~~ 319 (400)
T 3p5b_L 258 -------GRLYWVDSKLHSISSIDVNGGNR--KTILEDEKRLAHPFSLAVFE-----DKVFWTDIINEAIFSANRL 319 (400)
T ss_dssp -------TEEEEEETTTTEEEEEETTSCCC--EEEEECSSTTSSEEEEEEET-----TEEEEEESSSCSEEEEESS
T ss_pred -------CEEEEEECCCCEEEEEeCCCCcc--EEEEeCCCCCCCCEEEEEeC-----CEEEEecCCCCeEEEEEcC
Confidence 35556656677888888754321 11111111122234565532 2456666667777777743
No 308
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=91.50 E-value=5.2 Score=33.08 Aligned_cols=108 Identities=16% Similarity=0.231 Sum_probs=54.0
Q ss_pred ceeEEEeeC------CCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCC-----eEEEEEec
Q 022111 175 VQKLASCGC------DNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDG-----TVVIWTCA 243 (302)
Q Consensus 175 ~~~l~s~~~------D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~-----~i~iwd~~ 243 (302)
++.++.||. -+.+.+||+.+..|... ..+......-.++.+ + +..++.|+.++ .+.+||+.
T Consensus 149 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~--~~~p~~r~~~~~~~~--~----~~iyv~GG~~~~~~~~~~~~yd~~ 220 (315)
T 4asc_A 149 DLVYVIGGKGSDRKCLNKMCVYDPKKFEWKEL--APMQTARSLFGATVH--D----GRIIVAAGVTDTGLTSSAEVYSIT 220 (315)
T ss_dssp TEEEEECCBCTTSCBCCCEEEEETTTTEEEEC--CCCSSCCBSCEEEEE--T----TEEEEEEEECSSSEEEEEEEEETT
T ss_pred CEEEEEeCCCCCCcccceEEEEeCCCCeEEEC--CCCCCchhceEEEEE--C----CEEEEEeccCCCCccceEEEEECC
Confidence 456667765 24688899887766531 111100111112222 2 35666776554 47777776
Q ss_pred cCCcceeeeee-ccCCCcEEEEEEccCCCEEEEecCC---------------ceEEeeecCCceEEEe
Q 022111 244 KEGEQWEGRVL-KDFKTPVWSVSWSLTGNLLAVADAN---------------NVTLWKEAVDGEWQQV 295 (302)
Q Consensus 244 ~~~~~~~~~~~-~~~~~~v~~~~~spdg~~la~~~~d---------------~i~~w~~~~~~~~~~~ 295 (302)
+. .|..... .........+.+ ++++++.|+.+ .+.+||.. ..+|.+.
T Consensus 221 ~~--~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~-~~~W~~~ 283 (315)
T 4asc_A 221 DN--KWAPFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEE-EKKWEGV 283 (315)
T ss_dssp TT--EEEEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETT-TTEEEEE
T ss_pred CC--eEEECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCC-CChhhhh
Confidence 53 4532210 000111122222 66777777642 25667754 5689987
No 309
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=90.97 E-value=5.9 Score=32.74 Aligned_cols=104 Identities=8% Similarity=0.072 Sum_probs=51.8
Q ss_pred CCCEEEEeeCC--------CcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeC-C-----CeEEEEEcC
Q 022111 22 YGKRLATASSD--------SSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSY-D-----GQVIIWKEG 87 (302)
Q Consensus 22 ~~~~l~s~~~d--------~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~-D-----~~i~iwd~~ 87 (302)
+++.++.||.+ ..+.+||......+.+..+......- +++.. ++++++.|+. + ..+.+||+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~ 173 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGH-TVLSH---MDLVYVIGGKGSDRKCLNKMCVYDPK 173 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE---TTEEEEECCBCTTSCBCCCEEEEETT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccce-eEEEE---CCEEEEEeCCCCCCcccceEEEEeCC
Confidence 46677777743 34777887654443333332111111 12222 2567777776 2 457888886
Q ss_pred CCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCC-----cEEEEEec
Q 022111 88 NQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDG-----NISVFTAT 134 (302)
Q Consensus 88 ~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~-----~v~~~~~~ 134 (302)
+. .|..+.........-.++.+ + +.+++.|+.++ .+.+||..
T Consensus 174 ~~-~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~ 220 (315)
T 4asc_A 174 KF-EWKELAPMQTARSLFGATVH--D--GRIIVAAGVTDTGLTSSAEVYSIT 220 (315)
T ss_dssp TT-EEEECCCCSSCCBSCEEEEE--T--TEEEEEEEECSSSEEEEEEEEETT
T ss_pred CC-eEEECCCCCCchhceEEEEE--C--CEEEEEeccCCCCccceEEEEECC
Confidence 53 45544332211111122223 2 45677776654 46667765
No 310
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=90.76 E-value=6.6 Score=32.89 Aligned_cols=198 Identities=9% Similarity=-0.061 Sum_probs=103.2
Q ss_pred eeEEEEccCCCEEE-EeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCce
Q 022111 14 VHDVAMDFYGKRLA-TASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDW 92 (302)
Q Consensus 14 v~~~~~s~~~~~l~-s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~ 92 (302)
...+.|++.+..|. +-...+.|+.++........ ..+.........+++... .++++++-...+.|.+.++.....
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~-~~~~~~l~~p~glavd~~-~g~ly~~d~~~~~I~~~~~dG~~~- 113 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ-NVVVSGLLSPDGLACDWL-GEKLYWTDSETNRIEVSNLDGSLR- 113 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC-EEEEECCSCCCEEEEETT-TTEEEEEETTTTEEEEEETTSCSC-
T ss_pred cEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE-EEEcCCCCCccEEEEEcC-CCeEEEEECCCCEEEEEECCCCcE-
Confidence 44567776544444 43455677777765432111 111111123456777542 366777777788999998765322
Q ss_pred eEEEEecCCCCCeeEEEecCCCCCcEEEEEec--CCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecc
Q 022111 93 TQAHTFNDHKSSVNSIAWAPHELGLSLACGSS--DGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLG 170 (302)
Q Consensus 93 ~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~--d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 170 (302)
.. .+.........+++.|.. +. |..... .+.|..++.. +........ ..-..-..++++|+.
T Consensus 114 ~~--l~~~~~~~P~giavdp~~-g~-ly~td~~~~~~I~r~~~d--G~~~~~~~~-~~l~~Pnglavd~~~--------- 177 (318)
T 3sov_A 114 KV--LFWQELDQPRAIALDPSS-GF-MYWTDWGEVPKIERAGMD--GSSRFIIIN-SEIYWPNGLTLDYEE--------- 177 (318)
T ss_dssp EE--EECSSCSSEEEEEEEGGG-TE-EEEEECSSSCEEEEEETT--SCSCEEEEC-SSCSCEEEEEEETTT---------
T ss_pred EE--EEeCCCCCccEEEEeCCC-CE-EEEEecCCCCEEEEEEcC--CCCeEEEEE-CCCCCccEEEEeccC---------
Confidence 11 122334567899998863 33 444443 3555555543 221111111 112234677777643
Q ss_pred cCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEec
Q 022111 171 LLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCA 243 (302)
Q Consensus 171 ~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~ 243 (302)
+.++++-+..+.|..+|+...... ... .+.-..-..+++..+ ..+.+-...+.|..++..
T Consensus 178 ----~~lY~aD~~~~~I~~~d~dG~~~~-~~~---~~~~~~P~glav~~~-----~lywtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 178 ----QKLYWADAKLNFIHKSNLDGTNRQ-AVV---KGSLPHPFALTLFED-----ILYWTDWSTHSILACNKY 237 (318)
T ss_dssp ----TEEEEEETTTTEEEEEETTSCSCE-EEE---CSCCSCEEEEEEETT-----EEEEEETTTTEEEEEETT
T ss_pred ----CEEEEEECCCCEEEEEcCCCCceE-EEe---cCCCCCceEEEEeCC-----EEEEEecCCCeEEEEECC
Confidence 356666667788888887643211 111 112233456666432 455665667778777764
No 311
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=90.24 E-value=6.9 Score=32.25 Aligned_cols=151 Identities=16% Similarity=0.179 Sum_probs=72.1
Q ss_pred CCCEEEEeeC----C-----CcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCC-----CeEEEEEcC
Q 022111 22 YGKRLATASS----D-----SSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYD-----GQVIIWKEG 87 (302)
Q Consensus 22 ~~~~l~s~~~----d-----~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D-----~~i~iwd~~ 87 (302)
+++.++.||. + ..+.+||........+..+......-..+.+ ++++++.|+.+ ..+.+||+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~yd~~ 145 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI----DGHIYAVGGSHGCIHHNSVERYEPE 145 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE----TTEEEEECCEETTEECCCEEEEETT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE----CCEEEEEcCCCCCcccccEEEECCC
Confidence 5667777775 2 3577777765444333333211111112222 25677777643 357778876
Q ss_pred CCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecC-----CcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCC
Q 022111 88 NQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSD-----GNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMA 162 (302)
Q Consensus 88 ~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d-----~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 162 (302)
+. .|..+..+......-.++.+ + +.+++.|+.+ +.+..||..+ ..|...............+.+
T Consensus 146 ~~-~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~~-~~W~~~~~~p~~r~~~~~~~~----- 214 (308)
T 1zgk_A 146 RD-EWHLVAPMLTRRIGVGVAVL--N--RLLYAVGGFDGTNRLNSAECYYPER-NEWRMITAMNTIRSGAGVCVL----- 214 (308)
T ss_dssp TT-EEEECCCCSSCCBSCEEEEE--T--TEEEEECCBCSSCBCCCEEEEETTT-TEEEECCCCSSCCBSCEEEEE-----
T ss_pred CC-eEeECCCCCccccceEEEEE--C--CEEEEEeCCCCCCcCceEEEEeCCC-CeEeeCCCCCCccccceEEEE-----
Confidence 53 45444322211111122223 2 4566666654 3566777643 234321100000000111111
Q ss_pred CCceeecccCCCceeEEEeeCC-----CcEEEEEEecCccc
Q 022111 163 PGALVGLGLLDPVQKLASCGCD-----NTVKVWKMYNGIWK 198 (302)
Q Consensus 163 ~~~~~~~~~~~~~~~l~s~~~D-----~~v~iwd~~~~~~~ 198 (302)
+++.++.||.+ ..+.+||+.+..|.
T Consensus 215 -----------~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 215 -----------HNCIYAAGGYDGQDQLNSVERYDVETETWT 244 (308)
T ss_dssp -----------TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred -----------CCEEEEEeCCCCCCccceEEEEeCCCCcEE
Confidence 24667777664 46889998877665
No 312
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=90.08 E-value=9.7 Score=33.75 Aligned_cols=56 Identities=14% Similarity=0.315 Sum_probs=29.4
Q ss_pred CCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeee-eeeccc-----CCCCeEEEEeCCC
Q 022111 102 KSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDT-TRIDQA-----HPVGVTSVSWAPA 160 (302)
Q Consensus 102 ~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~-~~~~~~-----h~~~v~~~~~~~~ 160 (302)
-.....++|.|+ |.++++-...+.|.+++... +.... ..+... .......++|+|+
T Consensus 26 l~~P~~~a~~pd--G~l~V~e~~gg~I~~~~~~~-g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 26 LNKPHALLWGPD--NQIWLTERATGKILRVNPES-GSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp CSSEEEEEECTT--SCEEEEETTTCEEEEECTTT-CCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCCceEEEEcCC--CcEEEEEcCCCEEEEEECCC-CcEeEEecCCccccccCCCCceeEEEECCC
Confidence 345679999998 65555543334676665322 22221 111110 1234567888875
No 313
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=89.53 E-value=5.5 Score=33.94 Aligned_cols=110 Identities=10% Similarity=-0.004 Sum_probs=54.6
Q ss_pred eEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEE
Q 022111 152 VTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASA 231 (302)
Q Consensus 152 v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~ 231 (302)
-..++|.|+ +.+++ +..++.|+++|. ++...+..+..+.........|+++|+...++...++-
T Consensus 31 P~~ia~~pd--------------G~l~V-~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~ 94 (354)
T 3a9g_A 31 PWSIAPLGG--------------GRYLV-TERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYA 94 (354)
T ss_dssp EEEEEEEET--------------TEEEE-EETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEE
T ss_pred CeEEEEcCC--------------CeEEE-EeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEE
Confidence 456777765 34444 455688888863 33211111111112234578999999721113555555
Q ss_pred ec---C----CeEEEEEeccCCcce--eeeeec----cCCCcEEEEEEccCCCEEEEec
Q 022111 232 SQ---D----GTVVIWTCAKEGEQW--EGRVLK----DFKTPVWSVSWSLTGNLLAVAD 277 (302)
Q Consensus 232 s~---D----~~i~iwd~~~~~~~~--~~~~~~----~~~~~v~~~~~spdg~~la~~~ 277 (302)
+. + ..|..|+........ ...++. ........++|.|||.++++.+
T Consensus 95 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 95 SYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred eccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 43 3 456666654321000 001111 1111245799999998776643
No 314
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=89.32 E-value=8.9 Score=32.55 Aligned_cols=109 Identities=12% Similarity=0.107 Sum_probs=55.1
Q ss_pred eEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCccc-cccccccccCCCceeEEEeeCCCCCCccEEEE
Q 022111 152 VTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWK-MDCFPALQMHSDWVRSVAWAPNLGLPKSTIAS 230 (302)
Q Consensus 152 v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s 230 (302)
-..++|.|++ ..++ +..++.|++++ ++... +..+..+.........|+|+|+....+...++
T Consensus 33 P~~ia~~pdG--------------~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~ 95 (352)
T 2ism_A 33 PWALAFLPDG--------------GMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAY 95 (352)
T ss_dssp EEEEEECTTS--------------CEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEE
T ss_pred ceEEEEcCCC--------------eEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEE
Confidence 4567777753 4444 44568888887 33211 00011111223457899999982111345555
Q ss_pred EecC-----CeEEEEEeccCCcceeeeeeccC------CCcEEEEEEccCCCEEEEec
Q 022111 231 ASQD-----GTVVIWTCAKEGEQWEGRVLKDF------KTPVWSVSWSLTGNLLAVAD 277 (302)
Q Consensus 231 ~s~D-----~~i~iwd~~~~~~~~~~~~~~~~------~~~v~~~~~spdg~~la~~~ 277 (302)
-+.. ..|..++...........++... ......++|.|||.++++.+
T Consensus 96 ~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 96 RTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 5543 56666766532100001111111 11246899999997766643
No 315
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=89.02 E-value=14 Score=34.08 Aligned_cols=21 Identities=14% Similarity=0.099 Sum_probs=16.9
Q ss_pred eeEEEeeCCCcEEEEEEecCc
Q 022111 176 QKLASCGCDNTVKVWKMYNGI 196 (302)
Q Consensus 176 ~~l~s~~~D~~v~iwd~~~~~ 196 (302)
..++.++.++.++++|..++.
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~ 344 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGA 344 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCC
T ss_pred EEEEEECCCcEEEEEECCCCC
Confidence 457778899999999987763
No 316
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=88.77 E-value=9.1 Score=31.63 Aligned_cols=104 Identities=15% Similarity=0.154 Sum_probs=50.0
Q ss_pred CCCEEEEeeCC-------CcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeC------CCeEEEEEcCC
Q 022111 22 YGKRLATASSD-------SSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSY------DGQVIIWKEGN 88 (302)
Q Consensus 22 ~~~~l~s~~~d-------~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~------D~~i~iwd~~~ 88 (302)
+++.++.||.+ ..+.+||........+..+......- +++.. ++++++.|+. -..+.+||+.+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~ 184 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-NVISH---NGMIYCLGGKTDDKKCTNRVFIYNPKK 184 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-EEEEE---TTEEEEECCEESSSCBCCCEEEEETTT
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-EEEEE---CCEEEEEcCCCCCCCccceEEEEcCCC
Confidence 46677777754 23666776554443332222111111 12222 2567777764 23588888865
Q ss_pred CCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCC-----cEEEEEec
Q 022111 89 QNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDG-----NISVFTAT 134 (302)
Q Consensus 89 ~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~-----~v~~~~~~ 134 (302)
. .|..+.........-.++.+ + +.+++.|+.++ .+.+||..
T Consensus 185 ~-~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~ 230 (318)
T 2woz_A 185 G-DWKDLAPMKTPRSMFGVAIH--K--GKIVIAGGVTEDGLSASVEAFDLK 230 (318)
T ss_dssp T-EEEEECCCSSCCBSCEEEEE--T--TEEEEEEEEETTEEEEEEEEEETT
T ss_pred C-EEEECCCCCCCcccceEEEE--C--CEEEEEcCcCCCCccceEEEEECC
Confidence 3 46554332211111122333 2 45666666543 45567765
No 317
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=88.72 E-value=14 Score=33.83 Aligned_cols=54 Identities=17% Similarity=0.305 Sum_probs=30.4
Q ss_pred CCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccCCCEEEEecCC-ceEEeeecCCce
Q 022111 234 DGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGE 291 (302)
Q Consensus 234 D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la~~~~d-~i~~w~~~~~~~ 291 (302)
++.|..||+.+.+..|+.... .++++-.....|.++.+++.| .++.||....+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~----~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~ 519 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH----LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKE 519 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES----SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cceEEEEECCCCCEEEEecCC----CCCcccceEeCCCEEEEECCCCcEEEEECCCCCE
Confidence 678888888776555543321 122221222235566667666 688888754444
No 318
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=87.86 E-value=11 Score=31.60 Aligned_cols=96 Identities=11% Similarity=0.113 Sum_probs=46.1
Q ss_pred CCCEEEEeeCC-CcEEEEeecC--CCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeC-C---------CeEEEEEcCC
Q 022111 22 YGKRLATASSD-SSIKIIGLSN--SASQHLATLKGHRGPVWQVAWAHPKFGSILASCSY-D---------GQVIIWKEGN 88 (302)
Q Consensus 22 ~~~~l~s~~~d-~~v~lw~~~~--~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~-D---------~~i~iwd~~~ 88 (302)
+++.++.||.+ ..+.+||... .....+..+......-.+++.. ++++++.|+. + ..+.+||+.+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI---DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE---TTEEEEECCEEECTTSCEEECCCEEEEETTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE---CCEEEEEcCCCCCCCccceeeccEEEEeCCC
Confidence 57777777754 4577777752 3333333332101011122222 2567777765 2 3577888765
Q ss_pred CCceeEEEEec-CCCCCeeEEEecCCCCCcEEEEEecC
Q 022111 89 QNDWTQAHTFN-DHKSSVNSIAWAPHELGLSLACGSSD 125 (302)
Q Consensus 89 ~~~~~~~~~~~-~h~~~i~~l~~~pd~~~~~l~sg~~d 125 (302)
+.|..+.... .....-.++.+ + +.+++.|+.+
T Consensus 96 -~~W~~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~ 128 (357)
T 2uvk_A 96 -NSWVKLMSHAPMGMAGHVTFVH--N--GKAYVTGGVN 128 (357)
T ss_dssp -TEEEECSCCCSSCCSSEEEEEE--T--TEEEEEECCC
T ss_pred -CcEEECCCCCCcccccceEEEE--C--CEEEEEeCcC
Confidence 3455443322 11111122222 2 4567777754
No 319
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=87.34 E-value=13 Score=31.70 Aligned_cols=108 Identities=12% Similarity=0.097 Sum_probs=58.2
Q ss_pred ceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEe----cCcccCeEEEEeeCC--CCCCEEEEEe--CCCeEEEE
Q 022111 13 TVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATL----KGHRGPVWQVAWAHP--KFGSILASCS--YDGQVIIW 84 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~----~~h~~~v~~v~~~~~--~~~~~l~s~s--~D~~i~iw 84 (302)
..+.++|.|||+++++--..|.|++++........+..+ ....+....|+|.|+ .++.+.++-+ .+..|.-|
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~ 112 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM 112 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence 456799999998777654489898886543332233322 123456788999753 1244444432 34445445
Q ss_pred EcCCCC----c---ee-EEEEec-CCCCCeeEEEecCCCCCcEEEEE
Q 022111 85 KEGNQN----D---WT-QAHTFN-DHKSSVNSIAWAPHELGLSLACG 122 (302)
Q Consensus 85 d~~~~~----~---~~-~~~~~~-~h~~~i~~l~~~pd~~~~~l~sg 122 (302)
.+.... . .+ .+..+. ...+....|.|.|| |.+.++.
T Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpD--G~Lyvt~ 157 (347)
T 3das_A 113 LYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPD--KMLYAGT 157 (347)
T ss_dssp EBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTT--SCEEEEC
T ss_pred EeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCC--CCEEEEE
Confidence 544311 1 11 111222 12234578999998 5444443
No 320
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=86.38 E-value=15 Score=31.43 Aligned_cols=195 Identities=12% Similarity=0.107 Sum_probs=102.2
Q ss_pred CCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCC--CCC---E-EEEEeC--CCeEEEEEcCCCCceeE
Q 022111 23 GKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK--FGS---I-LASCSY--DGQVIIWKEGNQNDWTQ 94 (302)
Q Consensus 23 ~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~--~~~---~-l~s~s~--D~~i~iwd~~~~~~~~~ 94 (302)
..+++.....+-+.+||+.. +.+..+.. +.+..+...+.. .|+ + ++|.-. +.+|++|++..... .
T Consensus 40 ~s~ii~t~k~~gL~Vydl~G---~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~--~ 112 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSLDG---KMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG--T 112 (355)
T ss_dssp GCEEEEEETTTEEEEEETTS---CEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC--C
T ss_pred ccEEEEEcCCCCEEEEcCCC---cEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC--c
Confidence 35566666778899999953 44555543 345555443210 122 2 344444 68999997732111 2
Q ss_pred EEEecC-------CCCCeeEEEe--cCCCCCcEEEEEecCCcEEEEEecCCC--Cee---eeeecccCCCCeEEEEeCCC
Q 022111 95 AHTFND-------HKSSVNSIAW--APHELGLSLACGSSDGNISVFTATADG--GWD---TTRIDQAHPVGVTSVSWAPA 160 (302)
Q Consensus 95 ~~~~~~-------h~~~i~~l~~--~pd~~~~~l~sg~~d~~v~~~~~~~~~--~~~---~~~~~~~h~~~v~~~~~~~~ 160 (302)
+..+.. -...+..+++ +|.....++.....++.+..|++...+ ... ...+. -..++..+...+.
T Consensus 113 l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~--lgsq~EgcvvDd~ 190 (355)
T 3amr_A 113 LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK--MNSQTEGMAADDE 190 (355)
T ss_dssp EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE--CSSCEEEEEEETT
T ss_pred eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec--CCCCcceEEEcCC
Confidence 333321 1145566776 665323467777888999999885321 111 12221 1234444544432
Q ss_pred CCCCceeecccCCCceeEEEeeCCCcEEEEEEecCc-ccccccccc-ccC-CCceeEEEee--CCCCCCccEEEEEe-cC
Q 022111 161 MAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGI-WKMDCFPAL-QMH-SDWVRSVAWA--PNLGLPKSTIASAS-QD 234 (302)
Q Consensus 161 ~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~-~~~~~~~~~-~~h-~~~v~~v~~~--p~~~~~~~~l~s~s-~D 234 (302)
...|..+-+|.-|-.+|..... .....+..+ .++ ...+..|++- +++ ..+|++++ .+
T Consensus 191 --------------~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g---~gyLivSsQG~ 253 (355)
T 3amr_A 191 --------------YGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADG---KGYLMASSQGN 253 (355)
T ss_dssp --------------TTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGG---CEEEEEEEGGG
T ss_pred --------------CCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCC---CEEEEEEcCCC
Confidence 3677888887554444433211 011122222 122 2357788874 443 12455555 57
Q ss_pred CeEEEEEec
Q 022111 235 GTVVIWTCA 243 (302)
Q Consensus 235 ~~i~iwd~~ 243 (302)
.++.+||.+
T Consensus 254 ~s~~Vydr~ 262 (355)
T 3amr_A 254 SSYAIYDRQ 262 (355)
T ss_dssp TEEEEEESS
T ss_pred CEEEEEECC
Confidence 799999986
No 321
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=84.57 E-value=6.4 Score=31.38 Aligned_cols=104 Identities=10% Similarity=0.089 Sum_probs=54.1
Q ss_pred ceeEEEEccCCCEEEEeeCCCcEEEEeecCCC-------ceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEE
Q 022111 13 TVHDVAMDFYGKRLATASSDSSIKIIGLSNSA-------SQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWK 85 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~-------~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd 85 (302)
.++.++|+|+|.+.+. .+++++-.+..+.. ...+... +-.. ..++.|.+ +|.+.++ .|+.|.-++
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~-Gw~~-F~a~~fD~--~G~LYav--~dG~iyr~~ 113 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNG-GWNQ-FQFLFFDP--NGYLYAV--SKDKLYKAS 113 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECS-CGGG-CSEEEECT--TSCEEEE--ETTEEEEES
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccc-cccc-ceEEEECC--CCCEEEe--CCCEEEEeC
Confidence 5678999999986665 56654443332110 1112111 2222 35677754 3777666 568876666
Q ss_pred cCC--CCceeEE-EEe-cCCCCCeeEEEecCCCCCcEEEEEecCCcE
Q 022111 86 EGN--QNDWTQA-HTF-NDHKSSVNSIAWAPHELGLSLACGSSDGNI 128 (302)
Q Consensus 86 ~~~--~~~~~~~-~~~-~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v 128 (302)
..+ ...|... ..+ ..--..+..|.+.|+ |.+.+.. |+.+
T Consensus 114 pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~--G~Lyav~--dg~l 156 (236)
T 1tl2_A 114 PPQSDTDNWIARATEVGSGGWSGFKFLFFHPN--GYLYAVH--GQQF 156 (236)
T ss_dssp CCCSTTCCHHHHSEEEECSSGGGEEEEEECTT--SCEEEEE--TTEE
T ss_pred CCcCCCCceeccccEeccCCCCceEEEEECCC--ceEEEEe--CCcE
Confidence 522 1122110 011 111246789999998 6544444 6663
No 322
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=83.33 E-value=21 Score=30.56 Aligned_cols=83 Identities=14% Similarity=0.238 Sum_probs=40.9
Q ss_pred CceeEEEeeCCCCCCccEEEEEec-----------CCeEEEEEeccCCcceeeeeeccCCC------c-EEEEEEccC-C
Q 022111 210 DWVRSVAWAPNLGLPKSTIASASQ-----------DGTVVIWTCAKEGEQWEGRVLKDFKT------P-VWSVSWSLT-G 270 (302)
Q Consensus 210 ~~v~~v~~~p~~~~~~~~l~s~s~-----------D~~i~iwd~~~~~~~~~~~~~~~~~~------~-v~~~~~spd-g 270 (302)
..+.++.++|.. +..|..+.. ++...||........|.... .+... . ...++++|. .
T Consensus 278 ~~~~~i~~~p~~---~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~-~glp~~~~~~~~~~~~~~~~p~~~ 353 (394)
T 3b7f_A 278 DIGFPIVVHQRD---PRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQD-RGLPTDQAWLTVKRQAMTADAHAP 353 (394)
T ss_dssp SCEEEEEECSSC---TTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEEC-BTSCCSSCCCCCCTBSEEECCSSS
T ss_pred cceEEEEECCCC---CCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECC-CCCCCccccceEEEEEEEECCCCC
Confidence 346788888743 233433321 34456776655444554221 11111 1 135788874 3
Q ss_pred CEEEEecCCceEEeeecCCc-eEEEeee
Q 022111 271 NLLAVADANNVTLWKEAVDG-EWQQVSV 297 (302)
Q Consensus 271 ~~la~~~~d~i~~w~~~~~~-~~~~~~~ 297 (302)
..|.++..+ -.||...+.| .|++...
T Consensus 354 ~~l~~g~~~-g~l~~S~D~G~tW~~~~~ 380 (394)
T 3b7f_A 354 VGVYFGTTG-GEIWASADEGEHWQCIAS 380 (394)
T ss_dssp CCEEEECTT-SCEEEESSTTSBCEEEEC
T ss_pred CEEEEEeCC-CeEEEECCCCCCceEccc
Confidence 445555433 2344444444 4887654
No 323
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=80.15 E-value=26 Score=29.61 Aligned_cols=27 Identities=11% Similarity=0.235 Sum_probs=18.9
Q ss_pred CeeEEEecCCCCCcEEEEEecCCcEEEEE
Q 022111 104 SVNSIAWAPHELGLSLACGSSDGNISVFT 132 (302)
Q Consensus 104 ~i~~l~~~pd~~~~~l~sg~~d~~v~~~~ 132 (302)
....++|.|+ |..|..+...+.|++++
T Consensus 19 ~P~~i~~~pd--G~~l~V~e~~G~i~~~~ 45 (353)
T 2g8s_A 19 HPWALAFLPD--NHGMLITLRGGELRHWQ 45 (353)
T ss_dssp SEEEEEECST--TCCEEEEETTTEEEEEE
T ss_pred CcEEEEEcCC--CCEEEEEeCCceEEEEe
Confidence 4678999998 55244445678888876
No 324
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=76.29 E-value=48 Score=30.57 Aligned_cols=161 Identities=11% Similarity=-0.034 Sum_probs=81.4
Q ss_pred ceeEEEEccCCCEEEEee-CCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCc
Q 022111 13 TVHDVAMDFYGKRLATAS-SDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQND 91 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~~-~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~ 91 (302)
....++|++.+..|.-+. ..+.|+.+++..... ....+..-......|++... .++++++-...+.|.+.++.....
T Consensus 41 ~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~-~~~v~~~~~~~P~GlAvD~~-~~~ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 41 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES-VQNVVVSGLLSPDGLACDWL-GEKLYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC------CEEEECSSCSCEEEEEEETT-TTEEEEEETTTTEEEEEETTSCSC
T ss_pred ceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCc-eEEEEeCCCCCcCeEEEEec-CCEEEEEeCCCCEEEEEECCCCCE
Confidence 355678887665555444 346677777654211 11122222235677888653 356777777788999998865422
Q ss_pred eeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeeccc
Q 022111 92 WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGL 171 (302)
Q Consensus 92 ~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~ 171 (302)
.. .+.........|++.|.. +. |........-+|+....++........ ........++.++..
T Consensus 119 ~~---l~~~~l~~P~~Iavdp~~-g~-ly~tD~g~~~~I~r~~~dG~~~~~l~~-~~~~~P~Glald~~~---------- 182 (619)
T 3s94_A 119 KV---LFWQELDQPRAIALDPSS-GF-MYWTDWGEVPKIERAGMDGSSRFIIIN-SEIYWPNGLTLDYEE---------- 182 (619)
T ss_dssp EE---EECSSCSCCCCEEEETTT-TE-EEEEECSSSCEEEEEETTSCSCEEEEC-SSCSSEEEEEEETTT----------
T ss_pred EE---EEeCCCCCCceEEEecCC-Ce-EEEeccCCCCEEEEEECCCCceEEEEe-CCCCCCcEEEEEccC----------
Confidence 11 111234457889998863 43 433343322334433322221111111 112234556655532
Q ss_pred CCCceeEEEeeCCCcEEEEEEec
Q 022111 172 LDPVQKLASCGCDNTVKVWKMYN 194 (302)
Q Consensus 172 ~~~~~~l~s~~~D~~v~iwd~~~ 194 (302)
+.++++-+..+.|...|+..
T Consensus 183 ---~~LY~aD~~~~~I~~~~~dG 202 (619)
T 3s94_A 183 ---QKLYWADAKLNFIHKSNLDG 202 (619)
T ss_dssp ---TEEEEEETTTCCEEEESSSC
T ss_pred ---CEEEEEeCCCCeEEEecCCC
Confidence 34555555666777777654
No 325
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=76.28 E-value=41 Score=29.82 Aligned_cols=187 Identities=11% Similarity=0.153 Sum_probs=0.0
Q ss_pred CCcEEEEeecCCCceEEEEecCcc--cCeEEEEeeCCCCCCEEEEEe-------CCCeEEEEEcCCCCceeEEEEecCCC
Q 022111 32 DSSIKIIGLSNSASQHLATLKGHR--GPVWQVAWAHPKFGSILASCS-------YDGQVIIWKEGNQNDWTQAHTFNDHK 102 (302)
Q Consensus 32 d~~v~lw~~~~~~~~~~~~~~~h~--~~v~~v~~~~~~~~~~l~s~s-------~D~~i~iwd~~~~~~~~~~~~~~~h~ 102 (302)
+..|+-|++.. ...+.+.+.-|. ....-+.|..+.+.++++-.+ -.|.+.+|..+.. ..+.+.+|.
T Consensus 124 ~taVyHWsi~~-~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~----~sQ~ieGha 198 (494)
T 1bpo_A 124 DNAVYHWSMEG-ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK----VSQPIEGHA 198 (494)
T ss_dssp SSEEEEEESSS-SCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC----CEEEECCSE
T ss_pred CCeeEEecccC-CCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc----ccchheeee
Q ss_pred CCeeEEEecCCCCCcEEEEEecC----CcEEEEEecCC-CCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCcee
Q 022111 103 SSVNSIAWAPHELGLSLACGSSD----GNISVFTATAD-GGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQK 177 (302)
Q Consensus 103 ~~i~~l~~~pd~~~~~l~sg~~d----~~v~~~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (302)
+....+...-+.....|.+=... +++.+.++... ..-...... ...+-|.|+....--+++..++....
T Consensus 199 a~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk------~vdv~fppe~~~DFPvamqvs~kygv 272 (494)
T 1bpo_A 199 ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKK------AVDVFFPPEAQNDFPVAMQISEKHDV 272 (494)
T ss_dssp EEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCE------EEECCCCTTSTTCCEEEEEEETTTTE
T ss_pred eeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccce------eeeeeCCcccccCceeEEEecccCCE
Q ss_pred EEEeeCCCcEEEEEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeE
Q 022111 178 LASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTV 237 (302)
Q Consensus 178 l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i 237 (302)
+..-+.-|.+++||+.++ .++..-.-..+.|..-+.+... .-++.....|.+
T Consensus 273 iyviTK~G~i~lyDleTg----t~i~~nrIs~~~iF~t~~~~~~----~Gi~~Vnr~GqV 324 (494)
T 1bpo_A 273 VFLITKYGYIHLYDLETG----TCIYMNRISGETIFVTAPHEAT----AGIIGVNRKGQV 324 (494)
T ss_dssp EEEEETTSEEEEEETTTC----CEEEEEECCSSCEEEEEEETTT----TEEEEEETTCEE
T ss_pred EEEEecCceEEEEecccc----eeeeeecccCCceEEecccCCC----CcEEEEccCceE
No 326
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=73.25 E-value=37 Score=27.80 Aligned_cols=104 Identities=19% Similarity=0.318 Sum_probs=52.3
Q ss_pred ceeEEEeeC------CCcEEEEEEecCcccccc-cc-ccccCCCceeEEEeeCCCCCCccEEEEEecC-----CeEEEEE
Q 022111 175 VQKLASCGC------DNTVKVWKMYNGIWKMDC-FP-ALQMHSDWVRSVAWAPNLGLPKSTIASASQD-----GTVVIWT 241 (302)
Q Consensus 175 ~~~l~s~~~------D~~v~iwd~~~~~~~~~~-~~-~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D-----~~i~iwd 241 (302)
++.++.||. -+.+.+||+.+..|.... .. ....| ..+.+ + +..++.|+.+ ..+.+||
T Consensus 159 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~----~~~~~--~----~~iyv~GG~~~~~~~~~~~~yd 228 (318)
T 2woz_A 159 GMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMF----GVAIH--K----GKIVIAGGVTEDGLSASVEAFD 228 (318)
T ss_dssp TEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSC----EEEEE--T----TEEEEEEEEETTEEEEEEEEEE
T ss_pred CEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccc----eEEEE--C----CEEEEEcCcCCCCccceEEEEE
Confidence 456666654 235888998877665321 11 11112 12222 2 2556666543 2466777
Q ss_pred eccCCcceeeeeeccCCC---cEEEEEEccCCCEEEEecC---------------CceEEeeecCCceEEEe
Q 022111 242 CAKEGEQWEGRVLKDFKT---PVWSVSWSLTGNLLAVADA---------------NNVTLWKEAVDGEWQQV 295 (302)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~---~v~~~~~spdg~~la~~~~---------------d~i~~w~~~~~~~~~~~ 295 (302)
+.+. .|... ..... ....+. .++++++.|+. +.+.+||.. ..+|.+.
T Consensus 229 ~~~~--~W~~~--~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~-~~~W~~~ 293 (318)
T 2woz_A 229 LKTN--KWEVM--TEFPQERSSISLVS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDD-KKEWAGM 293 (318)
T ss_dssp TTTC--CEEEC--CCCSSCCBSCEEEE--ETTEEEEECCBCCBC----CCBCCBCCCEEEEETT-TTEEEEE
T ss_pred CCCC--eEEEC--CCCCCcccceEEEE--ECCEEEEECCeeccCCCCceeccceeeeEEEEeCC-CCEehhh
Confidence 7653 35321 11111 111222 36777777753 246677764 5689887
No 327
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=72.42 E-value=61 Score=29.96 Aligned_cols=220 Identities=8% Similarity=-0.072 Sum_probs=115.3
Q ss_pred CCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecCCCCCeeEEEe
Q 022111 31 SDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAW 110 (302)
Q Consensus 31 ~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~i~~l~~ 110 (302)
....|+..++..........+.+ -.....|.|.+. .+.++.+-..++.|..+++..... .. .+.........+++
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~-~~~~~~l~~d~~-~~~lywtD~~~~~I~r~~~~g~~~-~~--v~~~g~~~P~GlAv 87 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTG-VKEASALDFDVT-DNRIYWTDISLKTISRAFMNGSAL-EH--VVEFGLDYPEGMAV 87 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCS-CSCEEEEEEETT-TTEEEEEETTTTEEEEEETTSCSC-EE--EECSSCSCCCEEEE
T ss_pred eCCcEEEEECCCCCcceEEEcCC-CCceEEEEEECC-CCEEEEEECCCCeEEEEECCCCCc-EE--EEeCCCCCcceEEE
Confidence 56778888886543222222222 235678999764 466677777788888888754321 11 12222244667777
Q ss_pred cCCCCCcEEEEEecCCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCceeEEEe-eCCCcEEE
Q 022111 111 APHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQKLASC-GCDNTVKV 189 (302)
Q Consensus 111 ~pd~~~~~l~sg~~d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~-~~D~~v~i 189 (302)
.+.. +.+..+-...+.|.+.++.... ....+. ........++..|.. +.++.+- +..+.|..
T Consensus 88 D~~~-~~LY~tD~~~~~I~v~~~dG~~--~~~l~~-~~l~~P~~iavdp~~-------------G~lY~tD~g~~~~I~r 150 (628)
T 4a0p_A 88 DWLG-KNLYWADTGTNRIEVSKLDGQH--RQVLVW-KDLDSPRALALDPAE-------------GFMYWTEWGGKPKIDR 150 (628)
T ss_dssp ETTT-TEEEEEETTTTEEEEEETTSTT--CEEEEC-SSCCCEEEEEEETTT-------------TEEEEEECSSSCEEEE
T ss_pred EeCC-CEEEEEECCCCEEEEEecCCCc--EEEEEe-CCCCCcccEEEccCC-------------CeEEEeCCCCCCEEEE
Confidence 6542 3444444455677777654221 111111 122234566666532 3444543 33455665
Q ss_pred EEEecCccccccccccccCCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCCCcEEEEEEccC
Q 022111 190 WKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLT 269 (302)
Q Consensus 190 wd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~spd 269 (302)
.++..... . .+...-.+-+.|++.+++ +....+=+..+.|...|+..... +++...-....++++..
T Consensus 151 ~~~dG~~~--~---~l~~~~~~P~GlalD~~~---~~LY~aD~~~~~I~~~d~dG~~~----~v~~~~l~~P~glav~~- 217 (628)
T 4a0p_A 151 AAMDGSER--T---TLVPNVGRANGLTIDYAK---RRLYWTDLDTNLIESSNMLGLNR----EVIADDLPHPFGLTQYQ- 217 (628)
T ss_dssp EETTSCSC--E---EEECSCSSEEEEEEETTT---TEEEEEETTTTEEEEEETTSCSC----EEEEECCSCEEEEEEET-
T ss_pred EeCCCCce--E---EEECCCCCcceEEEcccc---CEEEEEECCCCEEEEEcCCCCce----EEeeccCCCceEEEEEC-
Confidence 65543211 1 111123456889999874 35556666777888888865322 12222222345777644
Q ss_pred CCEEEEecCC--ceEEeee
Q 022111 270 GNLLAVADAN--NVTLWKE 286 (302)
Q Consensus 270 g~~la~~~~d--~i~~w~~ 286 (302)
..|..++.. .|...+.
T Consensus 218 -~~ly~tD~~~~~I~~~dk 235 (628)
T 4a0p_A 218 -DYIYWTDWSRRSIERANK 235 (628)
T ss_dssp -TEEEEEETTTTEEEEEET
T ss_pred -CEEEEecCCCCEEEEEEC
Confidence 344444433 4655553
No 328
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=71.91 E-value=53 Score=29.07 Aligned_cols=64 Identities=16% Similarity=0.188 Sum_probs=36.3
Q ss_pred ceeEEEEccCCC-EEEEeeCCCcEEEEeecCCC-ceEEEEec---------CcccCeEEEEeeCC--CCCCEEEEEe
Q 022111 13 TVHDVAMDFYGK-RLATASSDSSIKIIGLSNSA-SQHLATLK---------GHRGPVWQVAWAHP--KFGSILASCS 76 (302)
Q Consensus 13 ~v~~~~~s~~~~-~l~s~~~d~~v~lw~~~~~~-~~~~~~~~---------~h~~~v~~v~~~~~--~~~~~l~s~s 76 (302)
.-+.++|.||+. .|+.+...|.|++++..... ...+..+. +.......|+|.|+ +++.+.++-+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt 91 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYT 91 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEE
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEe
Confidence 345789999985 45556789999998643221 11222221 11456788999653 1244444443
No 329
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=71.54 E-value=43 Score=27.86 Aligned_cols=53 Identities=6% Similarity=-0.046 Sum_probs=27.4
Q ss_pred CCCEEEEeeC-C---------CcEEEEeecCCCceEEEEec-CcccCeEEEEeeCCCCCCEEEEEeCC
Q 022111 22 YGKRLATASS-D---------SSIKIIGLSNSASQHLATLK-GHRGPVWQVAWAHPKFGSILASCSYD 78 (302)
Q Consensus 22 ~~~~l~s~~~-d---------~~v~lw~~~~~~~~~~~~~~-~h~~~v~~v~~~~~~~~~~l~s~s~D 78 (302)
+++.++.||. + ..+.+||........+..+. .....-..+.+ ++++++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVH----NGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEE----TTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEE----CCEEEEEeCcC
Confidence 5677777776 2 45778887654444333322 10111112222 26788888765
No 330
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=71.47 E-value=67 Score=30.04 Aligned_cols=110 Identities=10% Similarity=0.122 Sum_probs=56.7
Q ss_pred CCCEEEEeeCCC------cEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCC--eEEEEEcCCCCcee
Q 022111 22 YGKRLATASSDS------SIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDG--QVIIWKEGNQNDWT 93 (302)
Q Consensus 22 ~~~~l~s~~~d~------~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~--~i~iwd~~~~~~~~ 93 (302)
+++.++.||.++ .+.+||........+..+...-..-..+.+ . ++++++.|+.++ .+.+||+.+. .|.
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~-~--~~~iyv~GG~~~~~~v~~yd~~t~-~W~ 526 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSL-P--DGNVLILGGVTEGPAMLLYNVTEE-IFK 526 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEEC-T--TSCEEEECCBCSSCSEEEEETTTT-EEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEE-c--CCEEEEECCCCCCCCEEEEECCCC-ceE
Confidence 677788887543 467777765444433322211111112222 2 367888887655 6888988663 465
Q ss_pred EEEE---ecCCCCCeeEEEecCCCCCcEEEEEecC-------CcEEEEEecCC
Q 022111 94 QAHT---FNDHKSSVNSIAWAPHELGLSLACGSSD-------GNISVFTATAD 136 (302)
Q Consensus 94 ~~~~---~~~h~~~i~~l~~~pd~~~~~l~sg~~d-------~~v~~~~~~~~ 136 (302)
.+.. .......-.++.+..+ .+.+++.|+.+ +.+..||..+.
T Consensus 527 ~~~~~g~~p~~r~~~~a~v~~~~-~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 527 DVTPKDEFFQNSLVSAGLEFDPV-SKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp ECCCSSGGGGSCCBSCEEEEETT-TTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred EccCCCCCCCcccceeEEEEeCC-CCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 4432 1111111123444432 14566667652 35777887654
No 331
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=69.52 E-value=52 Score=27.99 Aligned_cols=160 Identities=10% Similarity=0.151 Sum_probs=77.4
Q ss_pred CEEEEeeCCCcEEEEeecCCCceEEEEecCcc--cCeEEEEeeCCCCCCEEEEEe-------CCCeEEEEEcCCCCceeE
Q 022111 24 KRLATASSDSSIKIIGLSNSASQHLATLKGHR--GPVWQVAWAHPKFGSILASCS-------YDGQVIIWKEGNQNDWTQ 94 (302)
Q Consensus 24 ~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~--~~v~~v~~~~~~~~~~l~s~s-------~D~~i~iwd~~~~~~~~~ 94 (302)
+.|+-.. +..|+-|+++.. ..+.+.+.-|. ....-+.|..+.+.++++-.+ -.|.+.+|..+.. .
T Consensus 118 ~~L~lVT-~taVyHWs~~~~-s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~----~ 191 (365)
T 2xzh_A 118 NTVALVT-DNAVYHWSMEGE-SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK----V 191 (365)
T ss_dssp SEEEEEE-SSEEEEEESSTT-CCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT----E
T ss_pred CeEEEEc-CCcEEEEcccCC-CCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc----c
Confidence 3444333 556888888653 23444554443 223334454444567654433 2477888887653 3
Q ss_pred EEEecCCCCCeeEEEecCCC-CCcEEEEEecC---CcEEEEEecCCC-CeeeeeecccCCCCeEEEEeCCCCCCCceeec
Q 022111 95 AHTFNDHKSSVNSIAWAPHE-LGLSLACGSSD---GNISVFTATADG-GWDTTRIDQAHPVGVTSVSWAPAMAPGALVGL 169 (302)
Q Consensus 95 ~~~~~~h~~~i~~l~~~pd~-~~~~l~sg~~d---~~v~~~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 169 (302)
.+.+.+|.+....+.+.-+. ....++.+... +++.+.++.... .-. ....+...+-|.|+....--+++
T Consensus 192 sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~------~f~kk~vdi~fppea~~DFPVam 265 (365)
T 2xzh_A 192 SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ------PFPKKAVDVFFPPEAQNDFPVAM 265 (365)
T ss_dssp EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCC------CCCCEEEEECCCTTCTTCCEEEE
T ss_pred cceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCC------CcccccceeeCCccccCCceEEE
Confidence 45566776544444332111 12233333321 466666653220 000 11112333434443211111233
Q ss_pred ccCCCceeEEEeeCCCcEEEEEEecC
Q 022111 170 GLLDPVQKLASCGCDNTVKVWKMYNG 195 (302)
Q Consensus 170 ~~~~~~~~l~s~~~D~~v~iwd~~~~ 195 (302)
..++....+..-+.-|.+++||+.++
T Consensus 266 qvs~kygviyviTK~G~ihlyDleTg 291 (365)
T 2xzh_A 266 QISEKHDVVFLITKYGYIHLYDLETG 291 (365)
T ss_dssp EEETTTTEEEEEETTSEEEEEETTTC
T ss_pred EecccCCEEEEEeCCcEEEEEEcccC
Confidence 33333455666677899999999887
No 332
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=65.99 E-value=58 Score=28.82 Aligned_cols=19 Identities=11% Similarity=0.010 Sum_probs=14.9
Q ss_pred cEEEEEEccCCCEEEEecC
Q 022111 260 PVWSVSWSLTGNLLAVADA 278 (302)
Q Consensus 260 ~v~~~~~spdg~~la~~~~ 278 (302)
....|+|.|||.+.++.++
T Consensus 140 ~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 140 LGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CEEEEEECTTSCEEEEECC
T ss_pred cCCcEeECCCCcEEEEeCC
Confidence 4678999999987776654
No 333
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=65.88 E-value=88 Score=29.24 Aligned_cols=113 Identities=9% Similarity=0.074 Sum_probs=57.2
Q ss_pred cCCCEEEEeeCC----CcEEEEeecCCCceEEE-E-----ecCcccCeEEEEeeCCCCCCEEEEEeCCC------eEEEE
Q 022111 21 FYGKRLATASSD----SSIKIIGLSNSASQHLA-T-----LKGHRGPVWQVAWAHPKFGSILASCSYDG------QVIIW 84 (302)
Q Consensus 21 ~~~~~l~s~~~d----~~v~lw~~~~~~~~~~~-~-----~~~h~~~v~~v~~~~~~~~~~l~s~s~D~------~i~iw 84 (302)
.+++.++.||.+ ..+.+||........+. . +...-..-..+.+ .. ++++++.|+.++ .+-+|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~-~~-~~~lyv~GG~~~~~~~~~dv~~y 473 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTI-SR-NNQLLLIGGRKAPHQGLSDNWIF 473 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEE-TT-TTEEEEECCBSSTTCBCCCCEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEE-cc-CCEEEEEcCCCCCCCccccEEEE
Confidence 457777888754 45778887665544443 2 1110001112222 10 267777777543 46778
Q ss_pred EcCCCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCC--cEEEEEecCCCCee
Q 022111 85 KEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDG--NISVFTATADGGWD 140 (302)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~--~v~~~~~~~~~~~~ 140 (302)
|+.+ +.|..+.........-.++.+. + +.+++.|+.++ .+.+||..+ ..|.
T Consensus 474 d~~t-~~W~~~~~~p~~R~~h~~~~~~-~--~~iyv~GG~~~~~~v~~yd~~t-~~W~ 526 (695)
T 2zwa_A 474 DMKT-REWSMIKSLSHTRFRHSACSLP-D--GNVLILGGVTEGPAMLLYNVTE-EIFK 526 (695)
T ss_dssp ETTT-TEEEECCCCSBCCBSCEEEECT-T--SCEEEECCBCSSCSEEEEETTT-TEEE
T ss_pred eCCC-CcEEECCCCCCCcccceEEEEc-C--CEEEEECCCCCCCCEEEEECCC-CceE
Confidence 8765 3455443222111111233222 3 55777777654 577888754 3354
No 334
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=63.17 E-value=1.1e+02 Score=29.22 Aligned_cols=58 Identities=17% Similarity=0.289 Sum_probs=33.4
Q ss_pred ccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecC----CCCCeeEEEecCCC
Q 022111 55 RGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND----HKSSVNSIAWAPHE 114 (302)
Q Consensus 55 ~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~----h~~~i~~l~~~pd~ 114 (302)
.+.|.+|.+.|. ++..+..+...+.|...+ ..+..|.++..... ....|.+|++.|..
T Consensus 14 ~g~i~~i~~~p~-~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~ 75 (789)
T 1sqj_A 14 GGYITGIVAHPK-TKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNN 75 (789)
T ss_dssp CSCEEEEEECSS-STTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTE
T ss_pred CCcEEEEEECCC-CCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCC
Confidence 357899999764 345556666666654443 23445654321110 12468999998853
No 335
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=62.21 E-value=1.1e+02 Score=31.60 Aligned_cols=153 Identities=10% Similarity=0.148 Sum_probs=69.3
Q ss_pred CCcEEEEeecCCCceEEEEecCccc--CeEEEEeeCCCCCCEEEEEe-------CCCeEEEEEcCCCCceeEEEEecCCC
Q 022111 32 DSSIKIIGLSNSASQHLATLKGHRG--PVWQVAWAHPKFGSILASCS-------YDGQVIIWKEGNQNDWTQAHTFNDHK 102 (302)
Q Consensus 32 d~~v~lw~~~~~~~~~~~~~~~h~~--~v~~v~~~~~~~~~~l~s~s-------~D~~i~iwd~~~~~~~~~~~~~~~h~ 102 (302)
+..|+-|++.+. ..+...+.-|.. ...-+.|..+.+.++++-.| -.|.+.+|..+.. ..+.+.||.
T Consensus 124 ~~aVyHW~~~~~-s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~----~sQ~iegha 198 (1630)
T 1xi4_A 124 DNAVYHWSMEGE-SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK----VSQPIEGHA 198 (1630)
T ss_pred CCeEEEeccCCC-CccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc----cchhhhHhH
Confidence 456888888542 233333333311 11123333333466655332 3578888877543 223455565
Q ss_pred CCeeEEEecCCC-CCcEEEEEec---CCcEEEEEecCC-CCeeeeeecccCCCCeEEEEeCCCCCCCceeecccCCCcee
Q 022111 103 SSVNSIAWAPHE-LGLSLACGSS---DGNISVFTATAD-GGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGLGLLDPVQK 177 (302)
Q Consensus 103 ~~i~~l~~~pd~-~~~~l~sg~~---d~~v~~~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (302)
+....+...-.. ....++.+.. .+++.+.++... ..-. ...-....+-|.|+....--+++..++..+.
T Consensus 199 ~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~------~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~ 272 (1630)
T 1xi4_A 199 ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ------PFPKKAVDVFFPPEAQNDFPVAMQISEKHDV 272 (1630)
T ss_pred hhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCC------CCccccccccCCcccccCcceEEEeccccCE
Confidence 444333332111 1122222211 256666665432 0000 1111122333444211111122223333455
Q ss_pred EEEeeCCCcEEEEEEecC
Q 022111 178 LASCGCDNTVKVWKMYNG 195 (302)
Q Consensus 178 l~s~~~D~~v~iwd~~~~ 195 (302)
+..-+.-|.+.++|+.++
T Consensus 273 iy~itk~G~~~~~d~~t~ 290 (1630)
T 1xi4_A 273 VFLITKYGYIHLYDLETG 290 (1630)
T ss_pred EEEEecCceEEEEecccc
Confidence 666677899999999987
No 336
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=60.32 E-value=1.2e+02 Score=28.87 Aligned_cols=146 Identities=11% Similarity=0.061 Sum_probs=69.8
Q ss_pred ccceeEEEEccC-CCEEEEeeCCCcEEEEeecCCCceEEEEecC----cccCeEEEEeeCCCCCCEEEEEeCCCe----E
Q 022111 11 EDTVHDVAMDFY-GKRLATASSDSSIKIIGLSNSASQHLATLKG----HRGPVWQVAWAHPKFGSILASCSYDGQ----V 81 (302)
Q Consensus 11 ~~~v~~~~~s~~-~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~----h~~~v~~v~~~~~~~~~~l~s~s~D~~----i 81 (302)
...|.+|.++|. ...+..++..+.|...+=...+.+.+....+ ....|.+|++.+. +...+..+..+.. .
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~-~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPN-NPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETT-EEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCC-CCCEEEEEeCccCCCccc
Confidence 357999999986 3556667777766554322222333211011 1346889998753 2344433332211 3
Q ss_pred EEEEc-CCCCceeEEEE-ec--C-CC--CCeeEEEecCCCCCcEEEEEecCCcEEEEEecCC-CCeeeeeecc---cCCC
Q 022111 82 IIWKE-GNQNDWTQAHT-FN--D-HK--SSVNSIAWAPHELGLSLACGSSDGNISVFTATAD-GGWDTTRIDQ---AHPV 150 (302)
Q Consensus 82 ~iwd~-~~~~~~~~~~~-~~--~-h~--~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~~~-~~~~~~~~~~---~h~~ 150 (302)
.||.- ..+..|..+.. +. . .. ..+..+++.|... ..+..+...+. ||..... ..|....... ....
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~-~~v~~g~~~~g--l~~S~DgG~TW~~~~~~~~~~~~~~ 169 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNS-NEVWMGTRTEG--IWKSSDRAKTWTNVTSIPDAFTNGI 169 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEE-EEEEEECSSSC--EEEESSTTSSCEEETTSCCCCSTTT
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCC-CEEEEEeccCC--EEEECCCCcccCCCccCccccCCCC
Confidence 45543 33445655432 11 0 01 1356788887642 34555553443 4444333 2454322100 0113
Q ss_pred CeEEEEeCCC
Q 022111 151 GVTSVSWAPA 160 (302)
Q Consensus 151 ~v~~~~~~~~ 160 (302)
.+..+.+.|.
T Consensus 170 ~~~~i~~~p~ 179 (789)
T 1sqj_A 170 GYTSVIFDPE 179 (789)
T ss_dssp CEEEEEECTT
T ss_pred CeEEEEECCC
Confidence 4666777664
No 337
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=59.15 E-value=32 Score=33.70 Aligned_cols=31 Identities=10% Similarity=0.101 Sum_probs=25.1
Q ss_pred ceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccC
Q 022111 211 WVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKE 245 (302)
Q Consensus 211 ~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~ 245 (302)
.|.+++..++. .++.+-+.|+++|||++.+.
T Consensus 237 ~~~~~~~~~~~----~~lftl~~D~~LRiWsl~t~ 267 (950)
T 4gq2_M 237 TIISMIFLSTY----NVLVMLSLDYKLKVLDLSTN 267 (950)
T ss_dssp CEEEEEEETTT----TEEEEEETTCEEEEEETTTT
T ss_pred eEEEEeecCCC----cEEEEEECCCEEEEEECCCC
Confidence 46777777663 68999999999999998763
No 338
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=59.15 E-value=1.1e+02 Score=28.18 Aligned_cols=157 Identities=14% Similarity=0.010 Sum_probs=83.6
Q ss_pred ceeEEEEccCCCEEEEe-eCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCc
Q 022111 13 TVHDVAMDFYGKRLATA-SSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQND 91 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~-~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~ 91 (302)
.+..++|++.+..|.-+ ..++.|+.+++.....+.+ +..-......|++... .++++++-...+.|.+.++.....
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v--~~~g~~~P~GlAvD~~-~~~LY~tD~~~~~I~v~~~dG~~~ 114 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHV--VEFGLDYPEGMAVDWL-GKNLYWADTGTNRIEVSKLDGQHR 114 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE--ECSSCSCCCEEEEETT-TTEEEEEETTTTEEEEEETTSTTC
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEE--EeCCCCCcceEEEEeC-CCEEEEEECCCCEEEEEecCCCcE
Confidence 45678898866555544 4567788877754332222 2211223456777543 356667777788899988765432
Q ss_pred eeEEEEecCCCCCeeEEEecCCCCCcEEEEEec--CCcEEEEEecCCCCeeeeeecccCCCCeEEEEeCCCCCCCceeec
Q 022111 92 WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSS--DGNISVFTATADGGWDTTRIDQAHPVGVTSVSWAPAMAPGALVGL 169 (302)
Q Consensus 92 ~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~--d~~v~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 169 (302)
. .+ +...-.....|++.|.. |. |.-... ...|...++. +....... ........+++++..
T Consensus 115 ~-~l--~~~~l~~P~~iavdp~~-G~-lY~tD~g~~~~I~r~~~d--G~~~~~l~--~~~~~P~GlalD~~~-------- 177 (628)
T 4a0p_A 115 Q-VL--VWKDLDSPRALALDPAE-GF-MYWTEWGGKPKIDRAAMD--GSERTTLV--PNVGRANGLTIDYAK-------- 177 (628)
T ss_dssp E-EE--ECSSCCCEEEEEEETTT-TE-EEEEECSSSCEEEEEETT--SCSCEEEE--CSCSSEEEEEEETTT--------
T ss_pred E-EE--EeCCCCCcccEEEccCC-Ce-EEEeCCCCCCEEEEEeCC--CCceEEEE--CCCCCcceEEEcccc--------
Confidence 1 11 11233557899998863 44 443343 3444444432 22111111 112234556665532
Q ss_pred ccCCCceeEEEeeCCCcEEEEEEec
Q 022111 170 GLLDPVQKLASCGCDNTVKVWKMYN 194 (302)
Q Consensus 170 ~~~~~~~~l~s~~~D~~v~iwd~~~ 194 (302)
+.++++-...+.|...|+..
T Consensus 178 -----~~LY~aD~~~~~I~~~d~dG 197 (628)
T 4a0p_A 178 -----RRLYWTDLDTNLIESSNMLG 197 (628)
T ss_dssp -----TEEEEEETTTTEEEEEETTS
T ss_pred -----CEEEEEECCCCEEEEEcCCC
Confidence 34555556667777777654
No 339
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=57.32 E-value=88 Score=26.45 Aligned_cols=77 Identities=17% Similarity=0.140 Sum_probs=43.7
Q ss_pred ccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEe----cCCCCCeeEEEecCC--CCCcEEEEE--ecCC
Q 022111 55 RGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTF----NDHKSSVNSIAWAPH--ELGLSLACG--SSDG 126 (302)
Q Consensus 55 ~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~----~~h~~~i~~l~~~pd--~~~~~l~sg--~~d~ 126 (302)
-..-+.|+|.++ |.++++--..+.|++++...+. ...+..+ .....-...|+++|+ .++.+.++- ..++
T Consensus 31 L~~P~~ia~~pd--G~llVter~~G~I~~v~~~~g~-~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~ 107 (347)
T 3das_A 31 LNSPWGLAPLPG--GDLLVSSRDEATITRVDAKTGR-KTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDN 107 (347)
T ss_dssp CSSEEEEEECTT--SCEEEEETTTCEEEEECTTTCC-EEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSE
T ss_pred CCCceEEEEcCC--CcEEEEEecCCEEEEEECCCCc-EeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCC
Confidence 345678999764 7777775558899888754432 2223222 223456789999996 224333322 2344
Q ss_pred cEEEEEec
Q 022111 127 NISVFTAT 134 (302)
Q Consensus 127 ~v~~~~~~ 134 (302)
.|.-|...
T Consensus 108 ~v~R~~~~ 115 (347)
T 3das_A 108 RIVRMLYD 115 (347)
T ss_dssp EEEEEEBC
T ss_pred EEEEEEeC
Confidence 45445443
No 340
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=53.41 E-value=1.1e+02 Score=28.99 Aligned_cols=86 Identities=12% Similarity=0.066 Sum_probs=52.0
Q ss_pred CCCceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeecc----------CCCcEEEEEEccC--CCEEEE
Q 022111 208 HSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKD----------FKTPVWSVSWSLT--GNLLAV 275 (302)
Q Consensus 208 h~~~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~----------~~~~v~~~~~spd--g~~la~ 275 (302)
-.+.|.+|.++|.. ++.+..+...+. ||........|....... ....+.++++.|. +.+++.
T Consensus 19 ~~g~i~~i~~~p~~---~~~~y~~~~~gg--v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~ 93 (763)
T 3a0f_A 19 GGGFISGLVAHPTE---KDLIYARTDIGG--TYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLA 93 (763)
T ss_dssp BCSCEEEEEECSSS---TTCEEEEESSSC--EEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEE
T ss_pred CCCceeEEEeCCCC---CCEEEEEeccCc--EEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEE
Confidence 45579999999974 355666665554 455555555565332211 1235889999883 344444
Q ss_pred ecC-----CceEEeeecCCce-EEEeeec
Q 022111 276 ADA-----NNVTLWKEAVDGE-WQQVSVV 298 (302)
Q Consensus 276 ~~~-----d~i~~w~~~~~~~-~~~~~~~ 298 (302)
++. ....||...+.|. |++...+
T Consensus 94 ~g~~~~~~~~~~i~~S~DgG~TW~~~~~~ 122 (763)
T 3a0f_A 94 QGDYVQWDPWAAFLVSDDRGKTFKQYRSP 122 (763)
T ss_dssp ECSCTTTCSCCEEEEESSTTSSCEEEECS
T ss_pred ecccccCCCCceEEEECCCCCCceeccCC
Confidence 432 2477887766565 9887643
No 341
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=52.95 E-value=1.2e+02 Score=26.63 Aligned_cols=110 Identities=7% Similarity=0.066 Sum_probs=56.9
Q ss_pred ceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecC------cccCeEEEEeeCCC--CCCEEEEEeC-------
Q 022111 13 TVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKG------HRGPVWQVAWAHPK--FGSILASCSY------- 77 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~------h~~~v~~v~~~~~~--~~~~l~s~s~------- 77 (302)
..+.++|.|+|+++++--..+.|++++........+..+.. ..+....|+|.|+. ++.+.++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 45689999999877764333468777643333333333321 24567789997631 3555555443
Q ss_pred -----CCeEEEEEcCCCC-ce---eE-EEEec-CCCCCeeEEEecCCCCCcEEEEEe
Q 022111 78 -----DGQVIIWKEGNQN-DW---TQ-AHTFN-DHKSSVNSIAWAPHELGLSLACGS 123 (302)
Q Consensus 78 -----D~~i~iwd~~~~~-~~---~~-~~~~~-~h~~~i~~l~~~pd~~~~~l~sg~ 123 (302)
...|.-++..... .. +. +..+. ...+....|+|.||. ..++++|+
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG-~Lyv~~Gd 163 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQ-KIYYTIGD 163 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTS-CEEEEECC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCC-eEEEEECC
Confidence 1234444443211 11 11 11122 123457899999983 23444443
No 342
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=47.16 E-value=2.3e+02 Score=28.36 Aligned_cols=116 Identities=12% Similarity=0.101 Sum_probs=67.0
Q ss_pred ceeEEEEccCCCEEEEeeCCCcEEEEeecCCCceEEEEecCcccCeEEEEeeCCC----CCCEEEEEeC-CCeEEEEEcC
Q 022111 13 TVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPK----FGSILASCSY-DGQVIIWKEG 87 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~h~~~v~~v~~~~~~----~~~~l~s~s~-D~~i~iwd~~ 87 (302)
.|..++.+ +.+++.+. ++.+.++.+........... .-...|.|+++.+.. .++++|.|.+ |++++|+++.
T Consensus 515 ~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~-~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~ 590 (1158)
T 3ei3_A 515 NISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHT-EMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLP 590 (1158)
T ss_dssp CCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEE-ECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETT
T ss_pred EEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeeccc-CCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECC
Confidence 34444433 34565554 67787877764322222222 124579999986432 2468899987 9999999997
Q ss_pred CCCceeEEEEecCCCCCeeEEEecCCCCCcEEEEEecCCcEEEEEec
Q 022111 88 NQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTAT 134 (302)
Q Consensus 88 ~~~~~~~~~~~~~h~~~i~~l~~~pd~~~~~l~sg~~d~~v~~~~~~ 134 (302)
+... ...+.+.. .....++.+..-....+|..|-.||.+.-+.+.
T Consensus 591 ~l~~-~~~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 591 SFEL-LHKEMLGG-EIIPRSILMTTFESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp TCCE-EEEEECCS-SCCEEEEEEEEETTEEEEEEEETTSEEEEEEEC
T ss_pred CCCe-EEEEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEc
Confidence 5321 12223321 234455554321123468888889988777664
No 343
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=46.40 E-value=1.9e+02 Score=27.11 Aligned_cols=222 Identities=14% Similarity=0.150 Sum_probs=99.7
Q ss_pred CeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEEecC----CCCCeeEEEecCCCCCcEEEEEec-C-----C
Q 022111 57 PVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFND----HKSSVNSIAWAPHELGLSLACGSS-D-----G 126 (302)
Q Consensus 57 ~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~----h~~~i~~l~~~pd~~~~~l~sg~~-d-----~ 126 (302)
.|..|.+.+. ++..|..+...+.|..++ ..+..|+.+..... ....|.+|++.|.....+++..+. . +
T Consensus 24 ~i~~i~~~p~-~~~~~~~~~~~ggv~rS~-D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~ 101 (737)
T 2cn3_A 24 FMPGIVFNET-EKDLIYARAAIGGAYRWD-PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPN 101 (737)
T ss_dssp CCCEEEECSS-STTCEEEECSSSCEEEEE-TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCC
T ss_pred eeeEEEECCC-CCCEEEEEecCCcEEEeC-CCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccC
Confidence 6889999764 344555555555544433 23345554321111 023588999998544444443321 1 1
Q ss_pred cEEEEEecCCC-Ceeeeeeccc---C---CCCeEEEEeCCCCCCCceeecccCCCceeEEEeeCCCcEEEEEEecCcccc
Q 022111 127 NISVFTATADG-GWDTTRIDQA---H---PVGVTSVSWAPAMAPGALVGLGLLDPVQKLASCGCDNTVKVWKMYNGIWKM 199 (302)
Q Consensus 127 ~v~~~~~~~~~-~~~~~~~~~~---h---~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~ 199 (302)
...||.....+ .|........ + ...+..++..|.. ...+..+...+ --||...++-...
T Consensus 102 ~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~-------------~~~v~~g~~~g-~gl~~S~DgG~tW 167 (737)
T 2cn3_A 102 MGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPND-------------NRILYLGTRCG-NGLWRSTDYGVTW 167 (737)
T ss_dssp CCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSC-------------TTCEEEECSTT-CCEEEESSTTSSC
T ss_pred CccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCC-------------CCEEEEeeccC-CcEEEeCCCCcce
Confidence 34566655433 4543322100 0 0012456666542 12333333221 1244433321111
Q ss_pred ccccccc--------------cCCCceeEEEeeCCCCC---CccEEEEEecCCeEEEEEeccCCcceeeeeeccCC-Cc-
Q 022111 200 DCFPALQ--------------MHSDWVRSVAWAPNLGL---PKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFK-TP- 260 (302)
Q Consensus 200 ~~~~~~~--------------~h~~~v~~v~~~p~~~~---~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~-~~- 260 (302)
+.+..+. .....+..+.++|.... ....|..+..|+.-.||.-......|... .... ..
T Consensus 168 ~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~DgG~tW~~~--~~~p~~~~ 245 (737)
T 2cn3_A 168 SKVESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDGGVTWKAV--PGQPKGLL 245 (737)
T ss_dssp EECTTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESSTTSCCEEC--TTCCCSSE
T ss_pred ecccCCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcCCCCceEEC--CCCCCccc
Confidence 1111111 11234777888774210 01245555555433466555545556422 1211 11
Q ss_pred EEEEEEccCCCEEEEecC--------CceEEeeecC-CceEEEee
Q 022111 261 VWSVSWSLTGNLLAVADA--------NNVTLWKEAV-DGEWQQVS 296 (302)
Q Consensus 261 v~~~~~spdg~~la~~~~--------d~i~~w~~~~-~~~~~~~~ 296 (302)
...+.++|++.++++... ..-.||...+ .+.|.+..
T Consensus 246 ~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~ 290 (737)
T 2cn3_A 246 PHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDIT 290 (737)
T ss_dssp EEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECC
T ss_pred ceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEcc
Confidence 244668887766665422 2345666533 34477643
No 344
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=42.59 E-value=1.5e+02 Score=24.92 Aligned_cols=80 Identities=10% Similarity=0.162 Sum_probs=41.7
Q ss_pred ceeEEEeeCCCCCCccEEEEEecCCeEEEEEeccCCcceeeeeeccCC----CcEEEEEEccC--CCEEEEec-------
Q 022111 211 WVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFK----TPVWSVSWSLT--GNLLAVAD------- 277 (302)
Q Consensus 211 ~v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~----~~v~~~~~spd--g~~la~~~------- 277 (302)
.+.+|.++|+. +..|..+...+ ||........|.... .... ..+.+++++|. +.+++...
T Consensus 233 ~~~~i~~~~~~---~~~l~vg~~~g---l~~s~D~G~tW~~~~-~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~ 305 (394)
T 3b7f_A 233 DPHCVVQHPAA---PDILYQQNHCG---IYRMDRREGVWKRIG-DAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWP 305 (394)
T ss_dssp CEEEEEECSSS---TTEEEEEETTE---EEEEETTTTEEECGG-GGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTT
T ss_pred ceeEEEECCCC---CCEEEEEcCCe---EEEeCCCCCcceECC-CCCCCCCccceEEEEECCCCCCEEEEEeccCCccce
Confidence 48899998863 24555565544 333333334453221 1111 23567888863 34444321
Q ss_pred ---CC-ceEEeeecCCc-eEEEeee
Q 022111 278 ---AN-NVTLWKEAVDG-EWQQVSV 297 (302)
Q Consensus 278 ---~d-~i~~w~~~~~~-~~~~~~~ 297 (302)
.+ ...+|...+.| .|++...
T Consensus 306 ~~~~~~~~~~~~S~DgG~tW~~~~~ 330 (394)
T 3b7f_A 306 RVSPGGKPAVYVTRDAGESWQRQDR 330 (394)
T ss_dssp CCBCCSSCCEEEESSTTSCCEEECB
T ss_pred eecCCCceeEEEECCCCCCceECCC
Confidence 12 35677765544 4887653
No 345
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=41.02 E-value=1.1e+02 Score=28.18 Aligned_cols=72 Identities=14% Similarity=0.175 Sum_probs=46.0
Q ss_pred eeEEEEccCCCEEEEee-CCCcEEEEeecC----------CCce-EEEEecCcccCeEEEEeeCCCCCCEEEEEeCCCeE
Q 022111 14 VHDVAMDFYGKRLATAS-SDSSIKIIGLSN----------SASQ-HLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQV 81 (302)
Q Consensus 14 v~~~~~s~~~~~l~s~~-~d~~v~lw~~~~----------~~~~-~~~~~~~h~~~v~~v~~~~~~~~~~l~s~s~D~~i 81 (302)
...+.++|||++++.++ .+.++.+++++. .... ......- .-.-...+|.+ +|....|---|.+|
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt~Fd~--~G~aYTtlfidSqv 401 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHTTFDG--RGNAYTTLFIDSQV 401 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEEEECS--SSEEEEEETTTTEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEEEECC--CCceEeeeeecceE
Confidence 34578999999887665 678999999852 1111 1122221 12235788865 37555566689999
Q ss_pred EEEEcCC
Q 022111 82 IIWKEGN 88 (302)
Q Consensus 82 ~iwd~~~ 88 (302)
.-|++..
T Consensus 402 vkWni~~ 408 (638)
T 3sbq_A 402 VKWNMEE 408 (638)
T ss_dssp EEEEHHH
T ss_pred EEEeccH
Confidence 9999853
No 346
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=39.40 E-value=39 Score=33.78 Aligned_cols=30 Identities=10% Similarity=0.120 Sum_probs=22.7
Q ss_pred eeEEEeeCCCCCCccEEEEEecCCeEEEEEeccC
Q 022111 212 VRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKE 245 (302)
Q Consensus 212 v~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~ 245 (302)
+.+++..++ ..++++-+.|+++|||++.+.
T Consensus 240 ~vs~~~~~~----~~~lftL~~D~~LRiWsl~t~ 269 (1139)
T 4fhn_B 240 IISMIFLST----YNVLVMLSLDYKLKVLDLSTN 269 (1139)
T ss_dssp BSCCEEETT----TTEEEEEBTTCEEEEEETTTT
T ss_pred eEEeeccCC----ccEEEEEeCCCEEEEEECCCC
Confidence 445555555 368999999999999998653
No 347
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=37.90 E-value=1.9e+02 Score=28.23 Aligned_cols=31 Identities=23% Similarity=0.188 Sum_probs=25.5
Q ss_pred ceeEEEEccCCCEEEEeeCCCcEEEEeecCC
Q 022111 13 TVHDVAMDFYGKRLATASSDSSIKIIGLSNS 43 (302)
Q Consensus 13 ~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~ 43 (302)
.+.+++..++..++.+-+.|+++|+|++..+
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~ 267 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTN 267 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTT
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCC
Confidence 4566666777789999999999999998664
No 348
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=37.22 E-value=1.6e+02 Score=23.44 Aligned_cols=62 Identities=15% Similarity=0.127 Sum_probs=36.9
Q ss_pred eEEEeeCCCCCCccEEEEEecCCeEEEEEeccC-Ccceeee--ee-ccCCCcEEEEEEccCCCEEEEecCCce
Q 022111 213 RSVAWAPNLGLPKSTIASASQDGTVVIWTCAKE-GEQWEGR--VL-KDFKTPVWSVSWSLTGNLLAVADANNV 281 (302)
Q Consensus 213 ~~v~~~p~~~~~~~~l~s~s~D~~i~iwd~~~~-~~~~~~~--~~-~~~~~~v~~~~~spdg~~la~~~~d~i 281 (302)
.++-|.|++ ...++ .||.|.-++.-+. ...|... .+ .+-=..+..|.|.|+|.+.++. +..+
T Consensus 91 ~a~~fD~~G----~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~l 156 (236)
T 1tl2_A 91 QFLFFDPNG----YLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQF 156 (236)
T ss_dssp SEEEECTTS----CEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEE
T ss_pred eEEEECCCC----CEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcE
Confidence 678899986 44444 6687766654222 1223211 11 1111357899999999999988 4454
No 349
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=33.06 E-value=2.2e+02 Score=26.85 Aligned_cols=31 Identities=13% Similarity=0.164 Sum_probs=23.7
Q ss_pred cceeEEEEccCCCEEEEeeCCCcEEEEeecCCC
Q 022111 12 DTVHDVAMDFYGKRLATASSDSSIKIIGLSNSA 44 (302)
Q Consensus 12 ~~v~~~~~s~~~~~l~s~~~d~~v~lw~~~~~~ 44 (302)
..|.++.+ +..++++-+.|.++|+|++.+..
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTE
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCc
Confidence 34555544 46799999999999999997643
No 350
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=26.77 E-value=1.1e+02 Score=28.87 Aligned_cols=29 Identities=10% Similarity=0.100 Sum_probs=22.7
Q ss_pred CeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCC
Q 022111 57 PVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQ 89 (302)
Q Consensus 57 ~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~ 89 (302)
.|.++.+. ..+|++-+.|+++|+|+++++
T Consensus 223 ~Is~~~~~----~~fLftL~~Dh~LRiWsL~t~ 251 (729)
T 3f7f_A 223 VISCKLFH----ERYLIVLTQNCHLKIWDLTSF 251 (729)
T ss_dssp EEEEEEET----TTEEEEEETTCEEEEEETTTT
T ss_pred eEEEeccC----CcEEEEEEcCCeEEEEEcCCC
Confidence 35555542 468999999999999999876
No 351
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=24.89 E-value=2.6e+02 Score=25.62 Aligned_cols=20 Identities=25% Similarity=0.204 Sum_probs=16.2
Q ss_pred CCCcEEEEEEccCCCEEEEe
Q 022111 257 FKTPVWSVSWSLTGNLLAVA 276 (302)
Q Consensus 257 ~~~~v~~~~~spdg~~la~~ 276 (302)
...++..+.|+||++.|-+.
T Consensus 529 ~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 529 IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp TTCEEEEEEECTTSSEEEEE
T ss_pred CCccCcCeeECCCCCEEEEE
Confidence 35679999999999877555
No 352
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=23.59 E-value=4.6e+02 Score=24.60 Aligned_cols=87 Identities=13% Similarity=0.158 Sum_probs=43.8
Q ss_pred cccCeEEEEeeCCCCCCEEEEEeCCCeEEEEEcCCCCceeEEEE-ec----C----CCCCeeEEEecCCCCCcEEEEEec
Q 022111 54 HRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHT-FN----D----HKSSVNSIAWAPHELGLSLACGSS 124 (302)
Q Consensus 54 h~~~v~~v~~~~~~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~-~~----~----h~~~i~~l~~~pd~~~~~l~sg~~ 124 (302)
-.+.|..|.+.|. ++..+..+...+.|...+ ..+..|..+.. .. . ....|.++++.|......++..+.
T Consensus 19 ~~g~i~~i~~~p~-~~~~~y~~~~~ggv~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~ 96 (763)
T 3a0f_A 19 GGGFISGLVAHPT-EKDLIYARTDIGGTYRWN-AAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGD 96 (763)
T ss_dssp BCSCEEEEEECSS-STTCEEEEESSSCEEEEE-TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECS
T ss_pred CCCceeEEEeCCC-CCCEEEEEeccCcEEEEC-CCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecc
Confidence 3557889999654 455555556555543332 23345554432 10 0 123588999988543444443321
Q ss_pred ----CCcEEEEEecCCC-Ceeee
Q 022111 125 ----DGNISVFTATADG-GWDTT 142 (302)
Q Consensus 125 ----d~~v~~~~~~~~~-~~~~~ 142 (302)
.....||.....+ .|...
T Consensus 97 ~~~~~~~~~i~~S~DgG~TW~~~ 119 (763)
T 3a0f_A 97 YVQWDPWAAFLVSDDRGKTFKQY 119 (763)
T ss_dssp CTTTCSCCEEEEESSTTSSCEEE
T ss_pred cccCCCCceEEEECCCCCCceec
Confidence 1124455544333 45543
No 353
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=22.56 E-value=4.7e+02 Score=24.36 Aligned_cols=110 Identities=11% Similarity=0.037 Sum_probs=55.2
Q ss_pred ceeEEEEccCC-CEEEEeeCCCcEEEEeecCCCceEEEEecC----cccCeEEEEeeCCCCCCEEEEEeC-C-----CeE
Q 022111 13 TVHDVAMDFYG-KRLATASSDSSIKIIGLSNSASQHLATLKG----HRGPVWQVAWAHPKFGSILASCSY-D-----GQV 81 (302)
Q Consensus 13 ~v~~~~~s~~~-~~l~s~~~d~~v~lw~~~~~~~~~~~~~~~----h~~~v~~v~~~~~~~~~~l~s~s~-D-----~~i 81 (302)
.|..|.++|.. ..+..+...+.|...+-...+.+.+....+ ....|.+|++.+...+.+++..+. . +..
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~ 103 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMG 103 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCc
Confidence 78899999863 455556655665555432223333221111 124588999875332344444432 1 124
Q ss_pred EEEEcC-CCCceeEEEE-ec--CC---CCCeeEEEecCCCCCcEEEEEe
Q 022111 82 IIWKEG-NQNDWTQAHT-FN--DH---KSSVNSIAWAPHELGLSLACGS 123 (302)
Q Consensus 82 ~iwd~~-~~~~~~~~~~-~~--~h---~~~i~~l~~~pd~~~~~l~sg~ 123 (302)
.||.-. .+..|+.+.. +. .+ ...+..|++.|.... .+..+.
T Consensus 104 ~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~-~v~~g~ 151 (737)
T 2cn3_A 104 AILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNR-ILYLGT 151 (737)
T ss_dssp EEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTT-CEEEEC
T ss_pred cEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCC-EEEEee
Confidence 555543 3455655432 11 00 112467899887543 455554
No 354
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=21.94 E-value=4e+02 Score=24.41 Aligned_cols=19 Identities=26% Similarity=0.197 Sum_probs=15.9
Q ss_pred CCcEEEEEEccCCCEEEEe
Q 022111 258 KTPVWSVSWSLTGNLLAVA 276 (302)
Q Consensus 258 ~~~v~~~~~spdg~~la~~ 276 (302)
...+..++||||++.|-++
T Consensus 530 ~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 530 GCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp TCEEEEEEECTTSSEEEEE
T ss_pred CccccCCEECCCCCEEEEE
Confidence 3568999999999988766
Done!