Your job contains 1 sequence.
>022112
MGFPANGSDAGSKPLKFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAA
VKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFE
YDSGHPLGSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFENVCTLRVRMPISSDLSNPR
NFITKITRYEKVVNIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYRQ
YIDPNFTWKNFTLEEQAKVIVAPRSNNELDASKLKTEFPELLSIKESLIKYVFEPNKKTT
GV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022112
(302 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2015489 - symbol:NRS/ER "nucleotide-rhamnose s... 1383 2.1e-141 1
TAIR|locus:2202960 - symbol:RHM1 "rhamnose biosynthesis 1... 1285 5.0e-131 1
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 1275 5.7e-130 1
TAIR|locus:2099372 - symbol:RHM3 "rhamnose biosynthesis 3... 1273 9.3e-130 1
UNIPROTKB|G4MPV2 - symbol:MGG_09238 "Uncharacterized prot... 770 1.9e-76 1
DICTYBASE|DDB_G0274991 - symbol:DDB_G0274991 "NAD-depende... 486 2.3e-46 1
WB|WBGene00015298 - symbol:C01F1.3 species:6239 "Caenorha... 368 2.9e-33 1
TIGR_CMR|GSU_2365 - symbol:GSU_2365 "dTDP-4-dehydrorhamno... 117 0.00015 1
UNIPROTKB|P29781 - symbol:strL "dTDP-4-dehydrorhamnose re... 117 0.00018 1
>TAIR|locus:2015489 [details] [associations]
symbol:NRS/ER "nucleotide-rhamnose
synthase/epimerase-reductase" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA;IDA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0008830 "dTDP-4-dehydrorhamnose 3,5-epimerase
activity" evidence=IDA] [GO:0019305 "dTDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
InterPro:IPR005913 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GO:GO:0005829 GO:GO:0005886 GO:GO:0009506 EMBL:AC011000
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0048046 GO:GO:0008831
GO:GO:0045226 GO:GO:0010253 GO:GO:0010489 GO:GO:0010490
GO:GO:0019305 GO:GO:0008830 EMBL:AF332445 EMBL:AY513232
IPI:IPI00546034 PIR:B96655 RefSeq:NP_564806.1 UniGene:At.70069
UniGene:At.71603 ProteinModelPortal:Q9LQ04 SMR:Q9LQ04 IntAct:Q9LQ04
STRING:Q9LQ04 PRIDE:Q9LQ04 DNASU:842603 EnsemblPlants:AT1G63000.1
GeneID:842603 KEGG:ath:AT1G63000 TAIR:At1g63000 InParanoid:Q9LQ04
KO:K12451 OMA:GAISHNE PhylomeDB:Q9LQ04 ProtClustDB:PLN02778
BioCyc:ARA:AT1G63000-MONOMER BioCyc:MetaCyc:AT1G63000-MONOMER
BRENDA:1.1.1.133 ArrayExpress:Q9LQ04 Genevestigator:Q9LQ04
Uniprot:Q9LQ04
Length = 301
Score = 1383 (491.9 bits), Expect = 2.1e-141, P = 2.1e-141
Identities = 260/295 (88%), Positives = 280/295 (94%)
Query: 5 ANGSDAGSKPLKFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPT 64
ANGS + S FLIYG+TGWIGGLLGKLC+AQ I +TYGSGRL++R S+ ADI +VKP+
Sbjct: 5 ANGSSSSS--FNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVKPS 62
Query: 65 HVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSG 124
HVFNAAGVTGRPNVDWCESHKVETIRTNV GTLTLAD+CR+KGL+LINYATGCIFEYDSG
Sbjct: 63 HVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSG 122
Query: 125 HPLGSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFENVCTLRVRMPISSDLSNPRNFIT 184
HPLGSGIGFKEEDTPNF GSFYSKTKAMVEELLKN+ENVCTLRVRMPISSDL+NPRNFIT
Sbjct: 123 HPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNFIT 182
Query: 185 KITRYEKVVNIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYRQYIDP 244
KI RYEKVV+IPNSMTILDELLPISIEMAKRNLTGI+NFTNPGVVSHNEILEMYR YIDP
Sbjct: 183 KIARYEKVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYIDP 242
Query: 245 NFTWKNFTLEEQAKVIVAPRSNNELDASKLKTEFPELLSIKESLIKYVFEPNKKT 299
+FTWKNFTLEEQAKVIVAPRSNNELDA+KLKTEFPEL+SIKESLIK+VFEPNKKT
Sbjct: 243 SFTWKNFTLEEQAKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKKT 297
>TAIR|locus:2202960 [details] [associations]
symbol:RHM1 "rhamnose biosynthesis 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA;IMP] [GO:0050377
"UDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=IDA] [GO:0010315 "auxin
efflux" evidence=IMP] [GO:0051555 "flavonol biosynthetic process"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009813 "flavonoid biosynthetic
process" evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010315 EMBL:AC007260
GO:GO:0051555 eggNOG:COG1091 GO:GO:0008831 GO:GO:0045226
EMBL:AY042833 EMBL:AY081471 IPI:IPI00543019 PIR:C96814
RefSeq:NP_177978.1 UniGene:At.198 UniGene:At.71030
ProteinModelPortal:Q9SYM5 SMR:Q9SYM5 IntAct:Q9SYM5 STRING:Q9SYM5
PaxDb:Q9SYM5 PRIDE:Q9SYM5 EnsemblPlants:AT1G78570.1 GeneID:844193
KEGG:ath:AT1G78570 TAIR:At1g78570 HOGENOM:HOG000167988
InParanoid:Q9SYM5 KO:K12450 OMA:IKFVDNR PhylomeDB:Q9SYM5
ProtClustDB:PLN02260 BioCyc:ARA:AT1G78570-MONOMER
BioCyc:MetaCyc:AT1G78570-MONOMER Genevestigator:Q9SYM5
GO:GO:0008460 GO:GO:0050377 GO:GO:0010280 GO:GO:0010253
TIGRFAMs:TIGR01181 Uniprot:Q9SYM5
Length = 669
Score = 1285 (457.4 bits), Expect = 5.0e-131, P = 5.0e-131
Identities = 242/296 (81%), Positives = 264/296 (89%)
Query: 5 ANGSDAGSKP-LKFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKP 63
+NG+ KP LKFLIYG+TGWIGGLLGK+C Q I + YG GRLE+R+SL DI +VKP
Sbjct: 376 SNGTP--QKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRSSLLQDIQSVKP 433
Query: 64 THVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDS 123
THVFN+AGVTGRPNVDWCESHK ETIR NV GTLTLADVCR+ GL+++N+ATGCIFEYD
Sbjct: 434 THVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMMNFATGCIFEYDD 493
Query: 124 GHPLGSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFENVCTLRVRMPISSDLSNPRNFI 183
HP GSGIGFKEEDTPNF GSFYSKTKAMVEELLK ++NVCTLRVRMPISSDL+NPRNFI
Sbjct: 494 KHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFI 553
Query: 184 TKITRYEKVVNIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYRQYID 243
TKI+RY KVVNIPNSMT+LDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMYR YI+
Sbjct: 554 TKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVSHNEILEMYRDYIN 613
Query: 244 PNFTWKNFTLEEQAKVIVAPRSNNELDASKLKTEFPELLSIKESLIKYVFEPNKKT 299
P F W NFTLEEQAKVIVAPRSNNE+DASKLK EFPELLSIKESLIKY + PNKKT
Sbjct: 614 PEFKWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIKYAYGPNKKT 669
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 1275 (453.9 bits), Expect = 5.7e-130, P = 5.7e-130
Identities = 237/297 (79%), Positives = 265/297 (89%)
Query: 4 PANGSDAGSKP-LKFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVK 62
P NG D+G K LKFLIYG+TGW+GGLLGKLC+ Q I + YG GRLE+RASL ADI ++K
Sbjct: 372 PKNG-DSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRASLVADIRSIK 430
Query: 63 PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYD 122
PTHVFNAAG+TGRPNVDWCESHK ETIR NV GTLTLADVCR+ L+++N+ATGCIFEYD
Sbjct: 431 PTHVFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYD 490
Query: 123 SGHPLGSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFENVCTLRVRMPISSDLSNPRNF 182
+ HP GSGIGFKEED PNF GSFYSKTKAMVEELL+ F+NVCTLRVRMPISSDL+NPRNF
Sbjct: 491 ATHPEGSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNF 550
Query: 183 ITKITRYEKVVNIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYRQYI 242
ITKI+RY KVV+IPNSMT+LDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMY+ YI
Sbjct: 551 ITKISRYNKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKNYI 610
Query: 243 DPNFTWKNFTLEEQAKVIVAPRSNNELDASKLKTEFPELLSIKESLIKYVFEPNKKT 299
+P F W NFT+EEQAKVIVA RSNNE+D SKL EFPE+LSIKESL+KYVFEPNK+T
Sbjct: 611 EPGFKWSNFTVEEQAKVIVAARSNNEMDGSKLSKEFPEMLSIKESLLKYVFEPNKRT 667
>TAIR|locus:2099372 [details] [associations]
symbol:RHM3 "rhamnose biosynthesis 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=ISS;IDA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005913 Pfam:PF01370 Pfam:PF04321
InterPro:IPR016040 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016829 EMBL:AP002061 GO:GO:0008831
GO:GO:0045226 HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260
GO:GO:0010280 GO:GO:0010253 eggNOG:COG1088 EMBL:AY078958
EMBL:AY142060 IPI:IPI00525100 RefSeq:NP_188097.1 UniGene:At.27812
ProteinModelPortal:Q9LH76 SMR:Q9LH76 IntAct:Q9LH76 STRING:Q9LH76
PaxDb:Q9LH76 PRIDE:Q9LH76 EnsemblPlants:AT3G14790.1 GeneID:820707
KEGG:ath:AT3G14790 TAIR:At3g14790 InParanoid:Q9LH76 OMA:TARMNNI
PhylomeDB:Q9LH76 Genevestigator:Q9LH76 GermOnline:AT3G14790
Uniprot:Q9LH76
Length = 664
Score = 1273 (453.2 bits), Expect = 9.3e-130, P = 9.3e-130
Identities = 235/297 (79%), Positives = 263/297 (88%)
Query: 4 PANGSDAGSK-PLKFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVK 62
P +G K LKFLIYG+TGW+GGLLGKLC+ Q I + YG GRLE+RASL ADI ++K
Sbjct: 368 PTKAGCSGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIADIRSIK 427
Query: 63 PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYD 122
P+HVFNAAG+TGRPNVDWCESHK ETIR NV GTLTLADVCR+ L+++N+ATGCIFEYD
Sbjct: 428 PSHVFNAAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYD 487
Query: 123 SGHPLGSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFENVCTLRVRMPISSDLSNPRNF 182
+ HP GSGIGFKEED PNF GSFYSKTKAMVEELL+ F+NVCTLRVRMPISSDL+NPRNF
Sbjct: 488 AAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNF 547
Query: 183 ITKITRYEKVVNIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYRQYI 242
ITKI+RY KVVNIPNSMTILDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMY+ YI
Sbjct: 548 ITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKSYI 607
Query: 243 DPNFTWKNFTLEEQAKVIVAPRSNNELDASKLKTEFPELLSIKESLIKYVFEPNKKT 299
+P+F W NF LEEQAKVIVAPRSNNE+D +KL EFPE+LSIK+SLIKYVFEPNK+T
Sbjct: 608 EPDFKWSNFNLEEQAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSLIKYVFEPNKRT 664
>UNIPROTKB|G4MPV2 [details] [associations]
symbol:MGG_09238 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR005913 Pfam:PF04321 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 EMBL:CM001231 GO:GO:0008831
GO:GO:0045226 RefSeq:XP_003709861.1 ProteinModelPortal:G4MPV2
EnsemblFungi:MGG_09238T0 GeneID:2680178 KEGG:mgr:MGG_09238
Uniprot:G4MPV2
Length = 292
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 150/290 (51%), Positives = 201/290 (69%)
Query: 16 KFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVTGR 75
+FLI+G GW+ G L + ++Q D + R+ENR + A++ VKPTHV N AG TGR
Sbjct: 5 RFLIWGGEGWVAGHLASILKSQGKDVYTTTVRMENREGVLAELEKVKPTHVLNCAGCTGR 64
Query: 76 PNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSGHPLGSGIGFKE 135
PNVDWCE +K T+R+NV+GTL L D C KG+ +ATGCI++YD HP G GF E
Sbjct: 65 PNVDWCEDNKEATMRSNVIGTLNLTDACFQKGIHCTVFATGCIYQYDDAHPW-DGPGFLE 123
Query: 136 EDTPNFVGSFYSKTKAMVEELLKNFENVCTLRVRMPISSDLSNPRNFITKITRYEKVVNI 195
D NF GSFYS+TKA VEE++K + N LR+RMP+S DL +PRNF+TKI +Y++VV+I
Sbjct: 124 TDKANFAGSFYSETKAHVEEVMKYYNNCLILRLRMPVSDDL-HPRNFVTKIAKYDRVVDI 182
Query: 196 PNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYRQYIDPNFTWKNFTLEE 255
PNS TIL +LLP+S+ MA+ TG++NFTNPG +SHNE+L ++R + P+F W+NF+LEE
Sbjct: 183 PNSNTILHDLLPLSLAMAEHKDTGVYNFTNPGAISHNEVLTLFRDIVRPSFKWQNFSLEE 242
Query: 256 QAKVIVAPRSNNELDASKLKTEFPEL-LSIKE--SLIKYVFEPNKKTTGV 302
QAKVI A RSN +LD +KL + E + + E + FE KK GV
Sbjct: 243 QAKVIKAGRSNCKLDTTKLTEKAKEYGIEVPEIHEAYRQCFERMKKA-GV 291
>DICTYBASE|DDB_G0274991 [details] [associations]
symbol:DDB_G0274991 "NAD-dependent
epimerase/dehydratase family protein" species:44689 "Dictyostelium
discoideum" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AAFI02000012 RefSeq:XP_644280.1 STRING:Q554P3
EnsemblProtists:DDB0217586 GeneID:8619708 KEGG:ddi:DDB_G0274991
eggNOG:NOG238479 InParanoid:Q554P3 OMA:ILKCGRS
ProtClustDB:CLSZ2431047 Uniprot:Q554P3
Length = 172
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 95/171 (55%), Positives = 132/171 (77%)
Query: 129 SGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFE-NVCTLRVRMPISSDLSNPRNFITKIT 187
SGIGFKEE+ N+ S YS TK MVE+L K++E N TLR+RMPIS +L+ PRNFITKI
Sbjct: 3 SGIGFKEEEEFNYFESHYSVTKQMVEKLTKHYESNTLTLRLRMPISENLNEPRNFITKII 62
Query: 188 RYEKVVNIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYRQYIDPNFT 247
YE+VVNIPNS T+L +LLPI+I+M+ + + G++NF NPGV+SHNEIL++Y I+PNF
Sbjct: 63 NYERVVNIPNSCTVLPDLLPIAIDMSIKQIKGVYNFVNPGVISHNEILDLYTLLINPNFK 122
Query: 248 WKNFTLEEQAKVIVAPRSNNELDASKLKTEFPELLSIKESLIKYVFEPNKK 298
++NFT EQ+K++ RSNN LD +KL++ +P + +IK+S I+ +F +KK
Sbjct: 123 YQNFTEIEQSKILKCGRSNNHLDTTKLESLYPTIPNIKKS-IENIFLNSKK 172
>WB|WBGene00015298 [details] [associations]
symbol:C01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0040011 GeneTree:ENSGT00530000063128 KO:K12450 GO:GO:0008460
eggNOG:COG1088 OMA:TARMNNI PANTHER:PTHR10366:SF41 HSSP:P26391
EMBL:FO080258 PIR:T15370 RefSeq:NP_001040727.1
ProteinModelPortal:Q17556 SMR:Q17556 STRING:Q17556
World-2DPAGE:0020:Q17556 PaxDb:Q17556 EnsemblMetazoa:C01F1.3a
GeneID:173762 KEGG:cel:CELE_C01F1.3 UCSC:C01F1.3a CTD:173762
WormBase:C01F1.3a HOGENOM:HOG000017218 InParanoid:Q17556
NextBio:880983 ArrayExpress:Q17556 Uniprot:Q17556
Length = 631
Score = 368 (134.6 bits), Expect = 2.9e-33, P = 2.9e-33
Identities = 93/290 (32%), Positives = 155/290 (53%)
Query: 19 IYGRTGWIGGLLGKLCQAQSIDFTYGSGRL--ENRASLEADIAAVKPTHVFNAAGVTGRP 76
IYG G++G L + + I + + ++ ++ +E ++A + THV G T P
Sbjct: 339 IYGGKGYVGQELQHVLNDRHIPYVLATKKVGFDSDEEVERELALLGVTHVICVTGRTHGP 398
Query: 77 N---VDWCESH--KVE-TIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSGHPLGSG 130
+++ E KV +R N+ LA +CR GL TG +F YD HP+G G
Sbjct: 399 GCNTIEYLEGRADKVFINVRDNMYSATILAHMCRKLGLHYTYIGTGYMFAYDKEHPIG-G 457
Query: 131 IGFKEEDTPNFVGSFYSKTKAMVEELLKNF-----ENVCTLRVRMPISSDLSNPRNFITK 185
FKEED P F GS YS K + + F EN+ +R+ +P+S DL PRN ++K
Sbjct: 458 AEFKEEDEPTFFGSAYSVVKGFTDRQMNYFNQNGWENL-NVRITLPLSLDLEQPRNLLSK 516
Query: 186 ITRYEKVVNIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYRQYIDPN 245
I +Y+++ +IP S+TIL + + + ++ G N NP +S E++++Y++ +D
Sbjct: 517 IIKYKELFDIPVSLTILPDCMNAMCNLMEQRSGGTLNLVNPEPISLYEVVKIYKEIVDET 576
Query: 246 FTWKNFTLE-EQAKVIVAPRSNNELDASKLKTEFPELLSIKESLIKYVFE 294
+ +E E+A+ ++A + N LD KL++ P +LS K+SLIK+ E
Sbjct: 577 VNPTSIGVETERAQHLLATKGNCALDTEKLQSLAP-VLSAKQSLIKHFSE 625
>TIGR_CMR|GSU_2365 [details] [associations]
symbol:GSU_2365 "dTDP-4-dehydrorhamnose reductase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=ISS]
[GO:0009243 "O antigen biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR005913 Pfam:PF04321 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008831 GO:GO:0045226 KO:K00067 TIGRFAMs:TIGR01214
HOGENOM:HOG000227711 HSSP:P26392 RefSeq:NP_953412.1
ProteinModelPortal:Q74AI9 GeneID:2686653 KEGG:gsu:GSU2365
PATRIC:22027579 OMA:TWAGRIA ProtClustDB:CLSK828807
BioCyc:GSUL243231:GH27-2367-MONOMER Uniprot:Q74AI9
Length = 280
Score = 117 (46.2 bits), Expect = 0.00015, P = 0.00015
Identities = 61/221 (27%), Positives = 96/221 (43%)
Query: 18 LIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVTGRPN 77
L+ G G +G L ++ + + S+ I +KP V N A T +
Sbjct: 3 LVVGAKGMLGRDLMRVLPGDVRGVDIEEIDITSPESVRRVILTLKPRVVVNCAAYT---D 59
Query: 78 VDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSGHPLGSGIGFKEED 137
VD CE++ + N G LA V R+ G +L+ +T +F+ P F E+D
Sbjct: 60 VDGCETNADLAMAVNGEGVGHLAAVTREIGALLVQMSTDYVFDGVKESP------FLEDD 113
Query: 138 TPNFVGSFYSKTKAMVEELLKNFENVCTLRVRMPISSDLSNPRNFITKITRY--EK---- 191
PN + S Y ++K M EE + E L VR L +NF+ + R E+
Sbjct: 114 PPNPL-SVYGRSKLMGEEQAR--ETPDHLIVRTQWLYGLGG-KNFVETMLRLSTERSEIA 169
Query: 192 VVN--IPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVS 230
VV+ I + +D L IS E+ + N G ++ N G+ S
Sbjct: 170 VVDDQIGSPTWTVDLALAIS-ELIENNCRGTYHAANRGICS 209
>UNIPROTKB|P29781 [details] [associations]
symbol:strL "dTDP-4-dehydrorhamnose reductase" species:1911
"Streptomyces griseus" [GO:0008831 "dTDP-4-dehydrorhamnose
reductase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR005913 Pfam:PF04321 UniPathway:UPA00066
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0019872 GO:GO:0008831 GO:GO:0045226
GO:GO:0019305 EMBL:X62567 TIGRFAMs:TIGR01214 PIR:S18618
ProteinModelPortal:P29781 Uniprot:P29781
Length = 304
Score = 117 (46.2 bits), Expect = 0.00018, P = 0.00018
Identities = 72/277 (25%), Positives = 109/277 (39%)
Query: 16 KFLIYGRTGWIGGLLGKLCQAQSIDFT-YGSGRLE--NRASLEADIAAVKPTHVFNAAGV 72
++L+ G +G +G L L + T G G L+ + A++ + +A +P V N A
Sbjct: 8 RWLVTGASGMLGRELTPLLDRRGAAVTALGRGHLDITDGAAVRSAVAEHRPAVVVNCAAW 67
Query: 73 TGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSGHPLGSGIG 132
T VD ES + N G LA CR G +L+ +T +F G P
Sbjct: 68 TA---VDEAESEPALAMAVNGEGPRHLAQACRAVGAVLLQLSTDYVFPGSGGRPY----- 119
Query: 133 FKEEDTPNFVGSFYSKTKAMVEELLKNFENVCTLRVRMPISSDLSNPRNFITKITRYEK- 191
ED P + Y TK E + VR P NF+ K+ R E
Sbjct: 120 --REDHPTGPRTVYGCTKRAGERAVLEVLPDTGYIVRTAWLYGAGGP-NFVAKMIRLEAD 176
Query: 192 -----VVNIPNSMT-----ILDELLPI-SIEMAKRNLTGIWNFTNPGVVSHNEIL-EMYR 239
VV+ + + D L + + +A GI++ TN G + N + E +R
Sbjct: 177 EDTVLVVDDQHGQPTWTADLADRLAALGAAALAGTAPAGIYHATNTGGTTWNALAPETFR 236
Query: 240 QY-IDPNFTWKNFTLEEQAKVIVAPRSNNELDASKLK 275
DP +L A+ V PR + LD S+ K
Sbjct: 237 LLGADPARVRPTTSLA-LARPAVRPRYS-VLDQSRWK 271
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 302 302 0.00097 115 3 11 22 0.41 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 610 (65 KB)
Total size of DFA: 217 KB (2120 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.81u 0.19s 25.00t Elapsed: 00:00:01
Total cpu time: 24.81u 0.19s 25.00t Elapsed: 00:00:01
Start: Sat May 11 06:17:20 2013 End: Sat May 11 06:17:21 2013