Query 022113
Match_columns 302
No_of_seqs 167 out of 2306
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 14:12:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022113.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022113hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yp2_A Glucose-1-phosphate ade 100.0 3.9E-35 1.3E-39 272.0 28.5 264 24-290 117-449 (451)
2 3brk_X Glucose-1-phosphate ade 100.0 3.6E-35 1.2E-39 269.8 23.0 257 25-287 108-396 (420)
3 3st8_A Bifunctional protein GL 100.0 5.3E-33 1.8E-37 260.7 29.9 260 2-262 70-401 (501)
4 2ggo_A 401AA long hypothetical 100.0 7.2E-33 2.5E-37 253.0 28.9 262 15-289 67-380 (401)
5 1hm9_A GLMU, UDP-N-acetylgluco 100.0 2.9E-31 9.8E-36 247.1 30.0 262 15-279 75-357 (468)
6 2v0h_A Bifunctional protein GL 100.0 1.9E-29 6.5E-34 234.0 26.9 260 15-280 70-350 (456)
7 4fce_A Bifunctional protein GL 100.0 2.2E-29 7.7E-34 233.7 25.8 261 14-280 72-353 (459)
8 3pnn_A Conserved domain protei 99.9 2.6E-22 8.9E-27 176.2 15.0 170 4-179 66-294 (303)
9 4ecm_A Glucose-1-phosphate thy 99.9 1E-21 3.5E-26 169.6 17.6 161 10-175 93-258 (269)
10 3juk_A UDP-glucose pyrophospho 99.9 3E-21 1E-25 167.7 17.9 162 12-177 93-271 (281)
11 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.9 1.3E-23 4.4E-28 189.7 1.6 196 47-262 14-243 (374)
12 3c8v_A Putative acetyltransfer 99.9 4.9E-23 1.7E-27 189.8 4.8 256 11-293 110-394 (496)
13 1fxo_A Glucose-1-phosphate thy 99.8 8.2E-19 2.8E-23 153.1 20.5 162 10-175 71-240 (293)
14 1mc3_A Glucose-1-phosphate thy 99.8 5.6E-19 1.9E-23 154.3 18.9 162 10-175 72-241 (296)
15 2e3d_A UTP--glucose-1-phosphat 99.8 1.4E-18 4.7E-23 152.5 19.5 159 12-174 100-279 (302)
16 1lvw_A Glucose-1-phosphate thy 99.8 1.5E-18 5.2E-23 151.4 19.1 162 10-175 72-241 (295)
17 1tzf_A Glucose-1-phosphate cyt 99.8 3.4E-18 1.1E-22 146.5 20.1 153 16-175 97-249 (259)
18 3r8y_A 2,3,4,5-tetrahydropyrid 99.8 4.5E-19 1.5E-23 150.5 8.4 124 156-282 52-200 (240)
19 2ux8_A Glucose-1-phosphate uri 99.8 2.5E-18 8.6E-23 150.4 12.1 160 12-175 104-278 (297)
20 2pa4_A UTP-glucose-1-phosphate 99.8 1.3E-17 4.6E-22 147.5 16.5 159 12-175 103-281 (323)
21 4evw_A Nucleoside-diphosphate- 99.8 1.2E-17 4.1E-22 142.9 14.6 161 3-172 61-243 (255)
22 1xhd_A Putative acetyltransfer 99.7 1.2E-16 3.9E-21 128.7 14.2 108 183-290 18-133 (173)
23 3tv0_A Dynactin subunit 6; LEF 99.7 1.7E-16 5.9E-21 130.1 15.1 111 181-291 16-146 (194)
24 3ixc_A Hexapeptide transferase 99.7 1.2E-16 4E-21 130.8 13.9 108 184-291 40-156 (191)
25 3r3r_A Ferripyochelin binding 99.7 1.1E-16 3.7E-21 130.5 13.3 109 183-291 21-144 (187)
26 1v3w_A Ferripyochelin binding 99.7 1.5E-16 5.3E-21 128.0 13.4 108 183-290 16-131 (173)
27 2qh5_A PMI, ALGA, mannose-6-ph 99.7 5.1E-17 1.7E-21 142.8 10.9 158 12-172 74-280 (308)
28 3r1w_A Carbonic anhydrase; bet 99.7 3.2E-16 1.1E-20 127.9 13.2 107 184-290 26-147 (189)
29 3bfp_A Acetyltransferase; LEFT 99.7 2.8E-15 9.6E-20 122.8 17.1 125 158-283 51-179 (194)
30 3vbi_A ANTD, galactoside O-ace 99.7 1.4E-16 4.9E-21 131.8 9.3 101 183-283 38-170 (205)
31 4ea9_A Perosamine N-acetyltran 99.7 3.4E-15 1.2E-19 124.8 17.1 124 158-282 75-200 (220)
32 3oam_A 3-deoxy-manno-octuloson 99.7 1.2E-15 4E-20 130.3 13.9 165 10-176 59-249 (252)
33 3mqg_A Lipopolysaccharides bio 99.6 4.6E-15 1.6E-19 121.3 14.5 46 247-292 102-154 (192)
34 3mqg_A Lipopolysaccharides bio 99.6 4E-15 1.4E-19 121.7 13.7 76 184-259 4-81 (192)
35 3kwd_A Carbon dioxide concentr 99.6 6.5E-15 2.2E-19 122.5 14.9 98 182-280 44-161 (213)
36 3eg4_A 2,3,4,5-tetrahydropyrid 99.6 3.5E-15 1.2E-19 130.0 13.3 105 185-290 131-245 (304)
37 3gos_A 2,3,4,5-tetrahydropyrid 99.6 5.4E-15 1.8E-19 127.4 14.2 101 185-286 106-216 (276)
38 1qre_A Carbonic anhydrase; bet 99.6 4.4E-15 1.5E-19 126.3 13.4 97 183-280 65-190 (247)
39 4eqy_A Acyl-[acyl-carrier-prot 99.6 7.6E-15 2.6E-19 127.3 14.5 16 231-246 101-116 (283)
40 3bfp_A Acetyltransferase; LEFT 99.6 3.3E-14 1.1E-18 116.4 16.2 142 147-289 27-179 (194)
41 3r5d_A Tetrahydrodipicolinate 99.6 3E-15 1E-19 129.1 10.2 100 185-286 180-293 (347)
42 3tk8_A 2,3,4,5-tetrahydropyrid 99.6 1.3E-14 4.3E-19 126.9 14.2 96 189-284 145-255 (316)
43 3fs8_A QDTC; acetyltransferase 99.6 1.9E-14 6.3E-19 124.3 15.2 91 184-274 9-115 (273)
44 1j2z_A Acyl-[acyl-carrier-prot 99.6 1.9E-14 6.6E-19 123.8 14.5 16 213-228 49-64 (270)
45 3fsy_A Tetrahydrodipicolinate 99.6 7.1E-15 2.4E-19 125.8 11.1 100 184-285 156-269 (332)
46 4e79_A UDP-3-O-acylglucosamine 99.6 3.6E-14 1.2E-18 126.9 15.3 41 88-128 32-73 (357)
47 4ea9_A Perosamine N-acetyltran 99.6 5.9E-14 2E-18 117.2 15.2 100 189-288 99-200 (220)
48 3r0s_A Acyl-[acyl-carrier-prot 99.6 5E-14 1.7E-18 121.0 15.0 43 204-246 43-99 (266)
49 3r0s_A Acyl-[acyl-carrier-prot 99.6 4.2E-14 1.4E-18 121.5 14.5 97 184-280 5-123 (266)
50 4e6u_A Acyl-[acyl-carrier-prot 99.6 5.3E-14 1.8E-18 120.9 15.0 17 230-246 85-101 (265)
51 3eh0_A UDP-3-O-[3-hydroxymyris 99.6 7.8E-14 2.7E-18 124.0 16.4 86 159-245 74-160 (341)
52 3hsq_A Acyl-[acyl-carrier-prot 99.6 6.9E-14 2.4E-18 119.7 15.1 48 199-246 34-95 (259)
53 3r8y_A 2,3,4,5-tetrahydropyrid 99.6 4.5E-14 1.5E-18 119.5 13.5 101 188-288 90-200 (240)
54 3pmo_A UDP-3-O-[3-hydroxymyris 99.6 5.1E-14 1.7E-18 126.4 14.4 41 87-127 49-90 (372)
55 4e6u_A Acyl-[acyl-carrier-prot 99.5 7.5E-14 2.6E-18 119.9 14.5 81 183-263 7-101 (265)
56 2qia_A UDP-N-acetylglucosamine 99.5 7.6E-14 2.6E-18 119.7 14.5 48 231-278 84-139 (262)
57 2x65_A Mannose-1-phosphate gua 99.5 8.3E-15 2.9E-19 130.0 8.7 151 17-170 76-270 (336)
58 3hsq_A Acyl-[acyl-carrier-prot 99.5 1.1E-13 3.9E-18 118.4 15.1 98 183-280 36-154 (259)
59 3tk8_A 2,3,4,5-tetrahydropyrid 99.5 8.3E-14 2.8E-18 121.7 13.9 89 198-286 171-276 (316)
60 3pmo_A UDP-3-O-[3-hydroxymyris 99.5 1.5E-13 5.2E-18 123.3 15.5 103 187-289 135-268 (372)
61 2qia_A UDP-N-acetylglucosamine 99.5 1.4E-13 4.8E-18 118.0 14.6 59 216-274 86-153 (262)
62 3ixc_A Hexapeptide transferase 99.5 6.8E-14 2.3E-18 114.3 11.9 88 194-282 32-129 (191)
63 1j2z_A Acyl-[acyl-carrier-prot 99.5 1.2E-13 4.2E-18 118.8 14.0 41 188-228 6-46 (270)
64 3t57_A UDP-N-acetylglucosamine 99.5 1.4E-13 4.7E-18 120.6 14.6 61 185-245 9-70 (305)
65 4e79_A UDP-3-O-acylglucosamine 99.5 1.6E-13 5.4E-18 122.7 14.7 13 157-169 78-90 (357)
66 3eh0_A UDP-3-O-[3-hydroxymyris 99.5 1.9E-13 6.4E-18 121.6 14.5 33 96-128 36-69 (341)
67 1xhd_A Putative acetyltransfer 99.5 1.6E-13 5.3E-18 110.3 12.3 84 195-279 12-104 (173)
68 3jqy_B NEUO, polysialic acid O 99.5 1.3E-13 4.3E-18 117.6 12.3 100 195-294 85-217 (252)
69 3fs8_A QDTC; acetyltransferase 99.5 1.7E-13 5.8E-18 118.2 13.2 75 214-288 71-147 (273)
70 3gos_A 2,3,4,5-tetrahydropyrid 99.5 2.7E-13 9.2E-18 116.8 14.4 29 201-229 133-161 (276)
71 3eg4_A 2,3,4,5-tetrahydropyrid 99.5 2.2E-13 7.7E-18 118.6 13.6 91 197-287 154-267 (304)
72 2cu2_A Putative mannose-1-phos 99.5 2.7E-14 9.1E-19 126.8 7.3 150 19-171 76-266 (337)
73 2ggo_A 401AA long hypothetical 99.5 1.4E-13 4.7E-18 125.2 12.1 85 178-262 223-312 (401)
74 3tv0_A Dynactin subunit 6; LEF 99.5 2.6E-13 9E-18 111.0 12.6 97 193-289 10-138 (194)
75 3vbi_A ANTD, galactoside O-ace 99.5 2.3E-13 8E-18 112.3 11.8 105 184-288 33-169 (205)
76 3t57_A UDP-N-acetylglucosamine 99.5 6.7E-13 2.3E-17 116.2 14.9 16 213-228 55-70 (305)
77 2wlg_A Polysialic acid O-acety 99.5 4.1E-13 1.4E-17 111.7 12.0 87 196-282 59-172 (215)
78 3r3r_A Ferripyochelin binding 99.5 2.5E-13 8.7E-18 110.4 10.1 43 203-245 23-69 (187)
79 3q1x_A Serine acetyltransferas 99.5 1.2E-13 4.3E-18 120.0 8.8 89 195-283 163-259 (313)
80 2v0h_A Bifunctional protein GL 99.5 4.6E-13 1.6E-17 123.7 12.9 22 18-39 101-122 (456)
81 2rij_A Putative 2,3,4,5-tetrah 99.5 3.9E-13 1.3E-17 119.2 11.6 130 154-286 168-327 (387)
82 4fce_A Bifunctional protein GL 99.5 5.6E-13 1.9E-17 123.3 13.1 61 184-245 275-335 (459)
83 3r1w_A Carbonic anhydrase; bet 99.4 7.1E-13 2.4E-17 107.9 11.9 65 198-262 22-102 (189)
84 3tqd_A 3-deoxy-manno-octuloson 99.4 1.9E-12 6.6E-17 110.3 14.4 160 10-172 66-254 (256)
85 3kwd_A Carbon dioxide concentr 99.4 9.5E-13 3.2E-17 109.3 12.2 67 214-281 112-179 (213)
86 1v3w_A Ferripyochelin binding 99.4 1.1E-12 3.6E-17 105.4 12.0 15 231-245 50-64 (173)
87 3nz2_A Hexapeptide-repeat cont 99.4 8.1E-13 2.8E-17 108.2 11.4 37 247-283 132-168 (195)
88 3srt_A Maltose O-acetyltransfe 99.4 2.2E-12 7.6E-17 104.9 13.8 52 232-283 98-168 (188)
89 3k8d_A 3-deoxy-manno-octuloson 99.4 9.6E-13 3.3E-17 112.7 12.1 163 9-173 74-262 (264)
90 3hjj_A Maltose O-acetyltransfe 99.4 2E-12 6.7E-17 105.4 13.4 36 248-283 135-170 (190)
91 4eqy_A Acyl-[acyl-carrier-prot 99.4 2.8E-12 9.5E-17 111.1 14.5 69 217-285 104-181 (283)
92 2icy_A Probable UTP-glucose-1- 99.4 3.6E-12 1.2E-16 116.9 15.6 168 2-172 144-370 (469)
93 2pig_A Putative transferase; S 99.4 1.3E-12 4.5E-17 115.0 12.2 100 182-283 70-197 (334)
94 1hm9_A GLMU, UDP-N-acetylgluco 99.4 1.6E-12 5.4E-17 120.6 13.3 24 16-39 105-128 (468)
95 3ftt_A Putative acetyltransfer 99.4 1E-12 3.4E-17 107.9 10.4 46 247-292 130-182 (199)
96 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.4 3.3E-12 1.1E-16 115.0 14.8 15 231-245 229-243 (374)
97 1qre_A Carbonic anhydrase; bet 99.4 1.9E-12 6.6E-17 109.9 12.4 98 184-282 84-209 (247)
98 3c8v_A Putative acetyltransfer 99.4 1.1E-12 3.9E-17 120.9 10.5 95 194-289 272-370 (496)
99 2pig_A Putative transferase; S 99.4 3.1E-12 1E-16 112.6 12.8 81 187-267 56-137 (334)
100 4hur_A Virginiamycin A acetylt 99.4 8.4E-13 2.9E-17 110.1 7.6 49 246-294 118-173 (220)
101 1krr_A Galactoside O-acetyltra 99.4 4.1E-12 1.4E-16 104.2 11.1 46 247-292 131-183 (203)
102 2p2o_A Maltose transacetylase; 99.4 3.5E-12 1.2E-16 103.4 10.2 37 247-283 130-166 (185)
103 1ocx_A Maltose O-acetyltransfe 99.4 3.7E-12 1.3E-16 102.9 10.1 37 247-283 128-164 (182)
104 3mc4_A WW/RSP5/WWP domain:bact 99.3 2.2E-12 7.7E-17 110.5 8.9 94 195-293 164-269 (287)
105 3st8_A Bifunctional protein GL 99.3 4.4E-12 1.5E-16 118.6 11.4 97 187-283 338-447 (501)
106 3f1x_A Serine acetyltransferas 99.3 3.6E-12 1.2E-16 110.6 9.6 89 194-282 189-286 (310)
107 4fcu_A 3-deoxy-manno-octuloson 99.3 3.1E-11 1.1E-15 102.6 13.4 165 7-174 56-248 (253)
108 3hjj_A Maltose O-acetyltransfe 99.3 6.1E-11 2.1E-15 96.6 14.6 57 232-288 100-169 (190)
109 3r5d_A Tetrahydrodipicolinate 99.3 5E-12 1.7E-16 109.1 8.1 31 248-280 263-293 (347)
110 3fsy_A Tetrahydrodipicolinate 99.3 2.7E-11 9.2E-16 103.8 12.3 32 183-214 161-192 (332)
111 1jyk_A LICC protein, CTP:phosp 99.3 2.5E-11 8.4E-16 103.5 12.0 151 7-174 87-250 (254)
112 2y6p_A 3-deoxy-manno-octuloson 99.3 6.3E-11 2.2E-15 99.5 14.1 154 14-173 61-230 (234)
113 3jqy_B NEUO, polysialic acid O 99.3 1.5E-11 5.3E-16 104.6 9.9 32 255-286 165-196 (252)
114 3q1x_A Serine acetyltransferas 99.3 1.4E-11 4.6E-16 107.2 9.3 89 189-277 163-259 (313)
115 1ssq_A SAT, serine acetyltrans 99.3 4.6E-11 1.6E-15 101.6 11.8 27 44-70 20-48 (267)
116 1vic_A 3-deoxy-manno-octuloson 99.2 2.2E-10 7.4E-15 98.0 16.0 163 11-175 60-252 (262)
117 3nz2_A Hexapeptide-repeat cont 99.2 8E-11 2.7E-15 96.2 12.2 38 250-287 129-166 (195)
118 3ftt_A Putative acetyltransfer 99.2 8.1E-11 2.8E-15 96.5 11.9 37 250-286 127-163 (199)
119 1t3d_A SAT, serine acetyltrans 99.2 8.9E-11 3E-15 100.8 11.9 47 247-293 209-262 (289)
120 2wlg_A Polysialic acid O-acety 99.2 6.4E-11 2.2E-15 98.3 10.4 104 184-287 37-171 (215)
121 1yp2_A Glucose-1-phosphate ade 99.2 3.3E-11 1.1E-15 111.2 9.2 93 188-284 307-418 (451)
122 1krr_A Galactoside O-acetyltra 99.2 3.3E-10 1.1E-14 92.8 13.7 37 250-286 128-164 (203)
123 1ocx_A Maltose O-acetyltransfe 99.2 1.5E-10 5.3E-15 93.3 11.5 35 252-286 127-161 (182)
124 2rij_A Putative 2,3,4,5-tetrah 99.2 4.3E-11 1.5E-15 106.2 8.5 12 24-35 56-67 (387)
125 2xme_A CTP-inositol-1-phosphat 99.2 1.3E-10 4.4E-15 97.6 10.4 150 7-172 75-230 (232)
126 1ssq_A SAT, serine acetyltrans 99.2 2.7E-10 9.1E-15 96.9 12.1 34 248-281 190-223 (267)
127 3mc4_A WW/RSP5/WWP domain:bact 99.2 1.6E-10 5.3E-15 99.1 10.6 78 187-264 162-251 (287)
128 3f1x_A Serine acetyltransferas 99.2 1.9E-10 6.6E-15 99.8 11.1 75 188-262 189-284 (310)
129 3srt_A Maltose O-acetyltransfe 99.1 7.2E-10 2.5E-14 90.0 13.2 101 185-292 58-184 (188)
130 1t3d_A SAT, serine acetyltrans 99.1 4.7E-10 1.6E-14 96.3 12.1 76 189-264 157-244 (289)
131 3eev_A Chloramphenicol acetylt 99.1 1E-10 3.4E-15 96.9 7.7 49 246-294 110-165 (212)
132 2p2o_A Maltose transacetylase; 99.1 3.4E-10 1.2E-14 91.6 10.6 16 213-228 94-109 (185)
133 3brk_X Glucose-1-phosphate ade 99.1 5.1E-10 1.7E-14 102.3 10.7 49 214-262 341-389 (420)
134 4e8l_A Virginiamycin A acetylt 99.1 3.8E-10 1.3E-14 93.6 8.1 49 246-294 117-172 (219)
135 1h7e_A 3-deoxy-manno-octuloson 99.0 3.2E-09 1.1E-13 89.6 13.8 160 11-176 61-239 (245)
136 4hur_A Virginiamycin A acetylt 99.0 5.4E-10 1.9E-14 93.0 7.5 40 250-289 116-155 (220)
137 1mr7_A Streptogramin A acetylt 99.0 5E-10 1.7E-14 92.3 6.5 82 202-283 49-149 (209)
138 2i5k_A UTP--glucose-1-phosphat 98.9 3.5E-09 1.2E-13 97.7 9.1 123 2-128 157-320 (488)
139 1xat_A Xenobiotic acetyltransf 98.8 1E-08 3.5E-13 84.5 9.1 83 212-294 55-164 (212)
140 3eev_A Chloramphenicol acetylt 98.8 1.1E-08 3.6E-13 84.7 8.4 38 250-287 108-145 (212)
141 4e8l_A Virginiamycin A acetylt 98.7 3.2E-08 1.1E-12 82.0 8.9 38 251-288 116-153 (219)
142 1mr7_A Streptogramin A acetylt 98.7 2.7E-08 9.2E-13 81.9 7.9 33 254-286 114-146 (209)
143 2dpw_A Hypothetical protein TT 98.7 6E-09 2.1E-13 87.4 3.4 129 22-168 67-231 (232)
144 1jv1_A Glcnac1P uridyltransfer 98.7 4.7E-08 1.6E-12 90.5 9.5 125 2-129 175-342 (505)
145 1ezi_A CMP-N-acetylneuraminic 98.7 8.7E-08 3E-12 79.9 9.2 147 10-174 62-223 (228)
146 1xat_A Xenobiotic acetyltransf 98.6 2E-07 6.8E-12 76.8 10.2 39 250-288 107-145 (212)
147 1qwj_A Cytidine monophospho-N- 98.4 3.6E-07 1.2E-11 76.3 6.8 146 10-175 61-221 (229)
148 2xwl_A 2-C-methyl-D-erythritol 98.3 1.8E-06 6.1E-11 71.4 9.3 148 13-174 67-218 (223)
149 2vsh_A TARI, 2-C-methyl-D-eryt 98.1 6.6E-06 2.3E-10 68.5 8.3 137 25-173 84-232 (236)
150 2yc3_A 2-C-methyl-D-erythritol 97.9 6.3E-05 2.2E-09 62.2 10.4 153 7-174 65-224 (228)
151 3f1c_A Putative 2-C-methyl-D-e 97.8 2.9E-05 1E-09 65.3 6.8 151 15-178 75-236 (246)
152 2oeg_A UTP-glucose-1-phosphate 97.8 4.2E-05 1.4E-09 70.6 8.0 106 22-128 186-320 (505)
153 1vgw_A 4-diphosphocytidyl-2C-m 97.7 0.00016 5.6E-09 59.8 9.9 145 15-173 74-227 (231)
154 2waw_A MOBA relate protein; un 97.6 0.0014 4.9E-08 52.5 13.8 124 12-174 67-195 (199)
155 3oc9_A UDP-N-acetylglucosamine 97.6 0.00019 6.5E-09 64.2 8.8 127 2-129 109-275 (405)
156 2wee_A MOBA-related protein; u 97.4 0.0025 8.4E-08 51.1 11.6 121 12-171 67-192 (197)
157 3rsb_A Adenosylcobinamide-phos 97.3 0.0023 7.9E-08 51.3 11.0 115 15-173 69-190 (196)
158 2yqc_A UDP-N-acetylglucosamine 97.2 0.00065 2.2E-08 62.6 7.6 124 2-127 178-348 (486)
159 2px7_A 2-C-methyl-D-erythritol 97.2 0.00078 2.7E-08 56.1 7.2 141 16-174 84-231 (236)
160 1vpa_A 2-C-methyl-D-erythritol 97.2 0.0029 9.9E-08 52.3 10.4 133 27-174 91-227 (234)
161 2e8b_A Probable molybdopterin- 97.1 0.00087 3E-08 54.3 6.2 112 17-172 73-196 (201)
162 1i52_A 4-diphosphocytidyl-2-C- 96.8 0.024 8.4E-07 46.7 12.9 145 15-174 75-227 (236)
163 3d5n_A Q97W15_sulso; NESG, SSR 96.2 0.0051 1.8E-07 49.5 5.1 117 18-172 63-186 (197)
164 1e5k_A Molybdopterin-guanine d 95.3 0.032 1.1E-06 44.9 6.1 38 25-65 77-116 (201)
165 3q80_A 2-C-methyl-D-erythritol 94.9 0.086 2.9E-06 43.5 7.9 136 28-174 84-229 (231)
166 3ngw_A Molybdopterin-guanine d 94.4 0.33 1.1E-05 39.2 10.1 126 7-175 53-193 (208)
167 1w55_A ISPD/ISPF bifunctional 90.8 0.19 6.6E-06 44.5 4.1 125 25-171 74-202 (371)
168 1xhb_A Polypeptide N-acetylgal 84.2 4.8 0.00016 36.4 9.4 69 3-74 78-147 (472)
169 1qg8_A Protein (spore coat pol 75.2 10 0.00036 30.5 7.8 54 13-69 54-116 (255)
170 3bcv_A Putative glycosyltransf 72.9 9.5 0.00032 30.4 6.9 66 4-74 51-117 (240)
171 2d7i_A Polypeptide N-acetylgal 70.7 12 0.00042 34.8 7.9 65 3-71 161-226 (570)
172 3cgx_A Putative nucleotide-dip 62.8 33 0.0011 28.0 8.1 51 16-67 77-129 (242)
173 1o6d_A Hypothetical UPF0247 pr 47.0 41 0.0014 25.6 5.7 73 2-78 22-102 (163)
174 2ffu_A Ppgalnact-2, polypeptid 44.5 51 0.0018 29.8 7.1 56 15-73 122-178 (501)
175 2nxv_A ATP synthase subunits r 41.2 1.1E+02 0.0038 24.5 8.0 52 14-68 47-101 (249)
176 2i5e_A Hypothetical protein MM 38.5 20 0.00068 28.3 2.9 41 18-64 69-111 (211)
177 4fix_A UDP-galactofuranosyl tr 33.7 38 0.0013 32.1 4.4 62 13-75 239-302 (657)
178 1to0_A Hypothetical UPF0247 pr 30.7 75 0.0026 24.3 4.9 73 2-77 21-107 (167)
179 4fak_A Ribosomal RNA large sub 30.7 1E+02 0.0034 23.5 5.5 74 2-78 25-112 (163)
180 2z86_A Chondroitin synthase; G 30.5 1.4E+02 0.0046 27.7 7.7 56 15-73 149-206 (625)
181 2z86_A Chondroitin synthase; G 27.2 1.2E+02 0.0042 28.0 6.8 52 15-70 431-483 (625)
182 1ns5_A Hypothetical protein YB 25.5 1E+02 0.0035 23.2 4.8 74 2-78 21-103 (155)
183 3l7i_A Teichoic acid biosynthe 24.6 16 0.00054 35.1 0.0 61 4-67 48-109 (729)
184 2ohw_A YUEI protein; structura 22.7 94 0.0032 22.7 3.9 84 2-92 27-110 (133)
185 3r3i_A UTP--glucose-1-phosphat 22.2 33 0.0011 31.5 1.7 102 24-128 240-362 (528)
186 3ckj_A Putative uncharacterize 20.1 46 0.0016 28.2 2.1 52 22-76 114-168 (329)
No 1
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=100.00 E-value=3.9e-35 Score=271.95 Aligned_cols=264 Identities=19% Similarity=0.307 Sum_probs=204.1
Q ss_pred CCCChHHHHHcHhhhccCCCCcEEEEeCCeecCcCHHHHHHHHHHcCCcEEEEEEeCC--CCCCcceEEEeCCCCcEEEE
Q 022113 24 PLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVD--EPSKYGVVVMEESTGKVEKF 101 (302)
Q Consensus 24 ~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~~~~l~~~~~~~~~~~~~~~l~~~~~~--~~~~~g~v~~d~~~~~v~~~ 101 (302)
++||+++|+.+++++.....++|++++||++++.++.++++.|+++++++|+++.+.+ ++..||++.+|+ +++++.|
T Consensus 117 ~~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d~-~~~v~~~ 195 (451)
T 1yp2_A 117 FQGTADAVRQYLWLFEEHTVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEKRATAFGLMKIDE-EGRIIEF 195 (451)
T ss_dssp CCSHHHHHHHTHHHHTTSCCSEEEEECSCEECCCCHHHHHHHHHHTTCSEEEEEEEECHHHHTTSEEEEECT-TSBEEEE
T ss_pred ccCcHHHHHHHHHHHHhcCCCeEEEecCcEEEcCCHHHHHHHHHHcCCcEEEEEEEcChhhcccCCEEEECC-CCCEEEE
Confidence 5899999999999885322378999999999999999999999998889998888764 567899999985 7899999
Q ss_pred EecCCCC---------------------CCCeEEEEEEEeCHhhH-hhccC---CCCCccccchHHHHhc-CcEEEEEec
Q 022113 102 VEKPKLF---------------------VGNKINAGIYLLNPAVL-DRIEL---RPTSIEKEVFPKIALE-GKLFAMVLP 155 (302)
Q Consensus 102 ~ekp~~~---------------------~~~~~~~Giy~~~~~~l-~~l~~---~~~~~~~~~~~~l~~~-~~v~~~~~~ 155 (302)
.|||... ...++++|+|+|++++| +.++. ...++..++++.++++ .++.++.++
T Consensus 196 ~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~l~~~i~~g~~v~~~~~~ 275 (451)
T 1yp2_A 196 AEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSLGMRVQAYLYD 275 (451)
T ss_dssp EESCCHHHHHHTCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHHHHHHHTTCTTCCCTTTTHHHHHHHTTCCEEEEECC
T ss_pred EECCCchhhccccccccccccccccccCCcceEEeeEEEEcHHHHHHHHHhhcccccchHhhHHHHHHhcCCceEEEEeC
Confidence 9999632 24689999999999987 44443 2234555778887776 689999999
Q ss_pred CeeEecCChHHHHHHHHHHHHhhcc-----cc------ccccccCceEecceEEcCCcEECCCCEECC----CcEECCCC
Q 022113 156 GFWMDIGQPRDYITGLRLYLDSLRK-----KS------SLKLATGANIVGNVLVHESAQIGEGCLIGP----DVAVGPGC 220 (302)
Q Consensus 156 g~~~digt~~~~~~a~~~~l~~~~~-----~~------~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~----~~~ig~~~ 220 (302)
++|.|+++|++|.++++.+++.... .. .+.+.+++.+ +++.| .++.||++|.|++ +++||++|
T Consensus 276 ~~w~digt~~~l~~a~~~l~~~~~~~~~~~~~~~~i~~~~~i~~~~~i-~~~~I-~~~~Ig~~~~I~~~~i~~~~Ig~~~ 353 (451)
T 1yp2_A 276 GYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRYLPPSKM-LDADV-TDSVIGEGCVIKNCKIHHSVVGLRS 353 (451)
T ss_dssp SCCEECSSHHHHHHHHHGGGCSSSCSSCSCCSSSCCCCCCCCCCCEEE-EEEEE-EEEEECTTCEEEEEEEESCEECTTC
T ss_pred CEEEECCCHHHHHHHHHHHhcccccchhccCCCCeeccCCccCCCeEE-cceEE-eCeEECCCCEEcceEEeccEECCCC
Confidence 9999999999999998876543311 01 1223333333 22333 3455566665554 88999999
Q ss_pred EECCCcEEeceEEccC-------------------CEECCCcEEeccEECCCCEECCCcEEccCc------EECCCcEEC
Q 022113 221 VVESGVRLSRCTVMRG-------------------VRIKKHACISSSIIGWHSTVGQWARVENMT------ILGEDVHVC 275 (302)
Q Consensus 221 ~i~~~~~i~~~~i~~~-------------------~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~------~i~~~~~v~ 275 (302)
.||++|.|.++++..+ +.||+++.|++++|+++|+||+++.|.+++ .||+++.||
T Consensus 354 ~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~~i~~~~Ig~~~~IG~~~~i~~~~~~~~~~~ig~~~~ig 433 (451)
T 1yp2_A 354 CISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRAIIDKNARIGDNVKIINKDNVQEAARETDGYFIK 433 (451)
T ss_dssp EECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEESEEECTTCEECTTCEECCSSCCSCEEEGGGTEEEE
T ss_pred EECCCCEEcCceEECCCCcccccccccccccCceeEEECCCCEEeccEeCCCcEECCCCEEeCCcccccCceeCCCEEEc
Confidence 9999999998888877 999999999999999999999999998653 567777777
Q ss_pred Cce-EEcCCeEecCcc
Q 022113 276 DEI-YSNGGVVLPHKE 290 (302)
Q Consensus 276 ~~~-~v~~~~v~~~~~ 290 (302)
+++ .|++++++++..
T Consensus 434 ~~~v~Ig~~a~i~ags 449 (451)
T 1yp2_A 434 SGIVTVIKDALIPSGI 449 (451)
T ss_dssp TTEEEECTTCEECTTC
T ss_pred CCEEEECCCcEECCCc
Confidence 764 467777776654
No 2
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.6e-35 Score=269.78 Aligned_cols=257 Identities=20% Similarity=0.292 Sum_probs=207.1
Q ss_pred CCChHHHHHcHhhhccCCCCcEEEEeCCeecCcCHHHHHHHHHHcCCcEEEEEEeC--CCCCCcceEEEeCCCCcEEEEE
Q 022113 25 LGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVMEESTGKVEKFV 102 (302)
Q Consensus 25 ~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~~~~l~~~~~~~~~~~~~~~l~~~~~--~~~~~~g~v~~d~~~~~v~~~~ 102 (302)
+||+++|+.|++++.....++|++++||++++.++.++++.|+++++++++++.+. +++..||++.+++ +++++.|.
T Consensus 108 ~Gt~~al~~a~~~l~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d~-~g~v~~~~ 186 (420)
T 3brk_X 108 EGTADAVYQNIDIIEPYAPEYMVILAGDHIYKMDYEYMLQQHVDSGADVTIGCLEVPRMEATGFGVMHVNE-KDEIIDFI 186 (420)
T ss_dssp CCHHHHHHTTHHHHHHHCCSEEEEEESSCEECBCTHHHHHHHHHTTCSEEEEEEEEETTGGGGSEEEEECT-TSBEEEEE
T ss_pred cCCHHHHHHHHHHHHhcCCCEEEEecccEEEchHHHHHHHHHHHcCCeEEEEEeecCccccCcccEEEECC-CCcEEEeE
Confidence 89999999999988531126899999999999999999999998888899888875 4667899999886 78999999
Q ss_pred ecCCCCC-------CCeEEEEEEEeCHhhH-hhccCC------CCCccccchHHHHhcCcEEEEEe-----------cCe
Q 022113 103 EKPKLFV-------GNKINAGIYLLNPAVL-DRIELR------PTSIEKEVFPKIALEGKLFAMVL-----------PGF 157 (302)
Q Consensus 103 ekp~~~~-------~~~~~~Giy~~~~~~l-~~l~~~------~~~~~~~~~~~l~~~~~v~~~~~-----------~g~ 157 (302)
|||.... ..++++|+|+|++++| +.++.. ..++..++++.+++++++.++.+ +++
T Consensus 187 ekp~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~~d~l~~li~~g~v~~~~~~~~~~~~~~~~~~~ 266 (420)
T 3brk_X 187 EKPADPPGIPGNEGFALASMGIYVFHTKFLMEAVRRDAADPTSSRDFGKDIIPYIVEHGKAVAHRFADSCVRSDFEHEPY 266 (420)
T ss_dssp ESCSSCCCBTTBTTEEEEEEEEEEEEHHHHHHHHTSSCCC----------CTTHHHHHSCEEEEEHHHHBCCCTTCSSCC
T ss_pred eCCCccccccccccceEEeeeeEEEeHHHHHHHHHHhcccCCccccchHHHHHHHhhhCcEEEEEeccccccccccCCCE
Confidence 9986543 5789999999999987 455431 22344677888888889999999 889
Q ss_pred eEecCChHHHHHHHHHHHHhhccccccccccCceEecceEEcCCcEECC-----CCEECCCcEECCCCEECCCcEEeceE
Q 022113 158 WMDIGQPRDYITGLRLYLDSLRKKSSLKLATGANIVGNVLVHESAQIGE-----GCLIGPDVAVGPGCVVESGVRLSRCT 232 (302)
Q Consensus 158 ~~digt~~~~~~a~~~~l~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~-----~~~i~~~~~ig~~~~i~~~~~i~~~~ 232 (302)
|.|+++|++|.+++..+++.... ...+.+++.+.+.+.++|.+.|++ ++.+ .++.||++|.| .++.|.+|+
T Consensus 267 ~~dI~t~~d~~~a~~~ll~~~~~--~~~~~~~~~i~~~~~i~~~~~i~~~~~~~~~~i-~~~~ig~~~~I-~~~~i~~~~ 342 (420)
T 3brk_X 267 WRDVGTIDAYWQANIDLTDVVPD--LDIYDKSWPIWTYAEITPPAKFVHDDEDRRGSA-VSSVVSGDCII-SGAALNRSL 342 (420)
T ss_dssp EECCCSHHHHHHHHHHTTSSSCS--SCTTCCSSCCCCCCCCCCCCEEECBCSSCBCEE-ESCEECSSCEE-ESCEEESCE
T ss_pred EEECCCHHHHHHHHHHHhCCCch--hhcCCCCCceeeccccCCCcEEecccccCCcEe-cCCEECCCCEE-cCCEEeCcE
Confidence 99999999999998876543211 112334445555666667777766 7777 69999999999 899999999
Q ss_pred EccCCEECCCcEEeccEECCCCEECCCcEEccCcEECCCcEECCceEEcCCeEec
Q 022113 233 VMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLP 287 (302)
Q Consensus 233 i~~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~~ 287 (302)
|+++|.|+++|.|.+|+|++++.|++++.|.+ ++||+++.|++++++..+...|
T Consensus 343 ig~~~~I~~~~~i~~~~i~~~~~i~~~~~i~~-~~ig~~~~i~~~~~i~~~~~~~ 396 (420)
T 3brk_X 343 LFTGVRANSYSRLENAVVLPSVKIGRHAQLSN-VVIDHGVVIPEGLIVGEDPELD 396 (420)
T ss_dssp ECTTCEECTTCEEEEEEECTTCEECTTCEEEE-EEECTTCEECTTCEESSCHHHH
T ss_pred EcCCCEECCCCEEcceEEcCCCEECCCCEEec-eEECCCCEECCCCEEeCCCCCC
Confidence 99999999999999999999999999999965 9999999999999998766555
No 3
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=100.00 E-value=5.3e-33 Score=260.68 Aligned_cols=260 Identities=18% Similarity=0.258 Sum_probs=177.0
Q ss_pred hhHHHHHhhcCCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCe-ecC-cCHHHHHHHHHHcCCcEEEEEEe
Q 022113 2 LNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDV-ISE-YPFAEMIEFHKAHGGEASIMVTK 79 (302)
Q Consensus 2 ~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~-l~~-~~l~~~~~~~~~~~~~~~l~~~~ 79 (302)
++|+++++++++.+++|+.|++++||||||++|++++.++..+++++++||. +.+ ..+.++++.|++.++++++++++
T Consensus 70 ~~~~~~~~~~~~~~i~~~~q~~~lGTa~Av~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~~ 149 (501)
T 3st8_A 70 APLVGELADTLGRTIDVALQDRPLGTGHAVLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTT 149 (501)
T ss_dssp HHHHHHHHHHHTSCCEEEECSSCCCHHHHHHHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHHHHHHHhcCCcEEEEEcCCCCCcHHHHHHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEeeec
Confidence 5778887888999999999999999999999999999765557899999998 444 45899999999999999999999
Q ss_pred CCCCCCcceEEEeCCCCcEEEEEecCCCC----CCCeEEEEEEEeCHhhHhhccC--CCCCccccch-----HHHHhc-C
Q 022113 80 VDEPSKYGVVVMEESTGKVEKFVEKPKLF----VGNKINAGIYLLNPAVLDRIEL--RPTSIEKEVF-----PKIALE-G 147 (302)
Q Consensus 80 ~~~~~~~g~v~~d~~~~~v~~~~ekp~~~----~~~~~~~Giy~~~~~~l~~l~~--~~~~~~~~~~-----~~l~~~-~ 147 (302)
.++|..||.+..++ +++++.|.|||... ..+++++|+|+|+++.|..+.. .......+++ ..+... .
T Consensus 150 ~~dp~~yG~i~~~~-~g~v~~ivEk~~~~~~~~~i~~in~Giy~f~~~~l~~~l~~l~~~n~~~e~yltd~i~~~~~~g~ 228 (501)
T 3st8_A 150 LDDPFGYGRILRTQ-DHEVMAIVEQTDATPSQREIREVNAGVYAFDIAALRSALSRLSSNNAQQELYLTDVIAILRSDGQ 228 (501)
T ss_dssp CSCCTTSCEEEECT-TCCEEEEECGGGCCHHHHHCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCSCCTTHHHHHHHHTTC
T ss_pred cCCchhcccccccc-ceeEEeeccccCCChhhccceeeeceeeeecchhHHHhhhhhcccccccccchhhHHHHHHhcCc
Confidence 99999999999986 89999999997654 3578999999999988865532 1222233433 333333 4
Q ss_pred cEEEEEecCeeE--ecCChHHHHHHHHHHHHhhcc-----------------ccccccccCceEec------ceEEcC--
Q 022113 148 KLFAMVLPGFWM--DIGQPRDYITGLRLYLDSLRK-----------------KSSLKLATGANIVG------NVLVHE-- 200 (302)
Q Consensus 148 ~v~~~~~~g~~~--digt~~~~~~a~~~~l~~~~~-----------------~~~~~~~~~~~i~~------~~~i~~-- 200 (302)
.+..+..+.+|. .+++...+.++...+..+... .....+.+++.|.+ .+.++.
T Consensus 229 ~v~~~~~~~~~~~~g~n~~~~l~~~~~~~~~r~~~~~~~~gv~~~dp~~~~i~~dv~IG~dv~I~~~v~i~g~~~Ig~~~ 308 (501)
T 3st8_A 229 TVHASHVDDSALVAGVNNRVQLAELASELNRRVVAAHQLAGVTVVDPATTWIDVDVTIGRDTVIHPGTQLLGRTQIGGRC 308 (501)
T ss_dssp CEEEEECSSGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEECTTCEECTTCEECSSEEEETTCEECTTC
T ss_pred eEEEEeccchhhhcccccHHHHHHHHHHhhhhhhhhhcccCceeeeeccccccCceEECCcceecceeeecCccccccce
Confidence 566676666654 445555555544333221100 01112222222222 222222
Q ss_pred -------------------------------CcEECCCCEECCCcEECCCCEECCCcEEeceEEccCCEECCCcEEeccE
Q 022113 201 -------------------------------SAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSI 249 (302)
Q Consensus 201 -------------------------------~~~i~~~~~i~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~ 249 (302)
++.+++.+.+++++.|++++.||.++.+.+|+|++++.|++.+++++++
T Consensus 309 ~I~~~~~i~~~~i~~~~~i~~~~i~~~~ig~~~~ig~~~~i~~~~~i~~~v~IG~~v~ik~s~Ig~gskI~~~~~i~d~~ 388 (501)
T 3st8_A 309 VVGPDTTLTDVAVGDGASVVRTHGSSSSIGDGAAVGPFTYLRPGTALGADGKLGAFVEVKNSTIGTGTKVPHLTYVGDAD 388 (501)
T ss_dssp EECSSCEEEEEEECTTCEECSEEEEEEEECTTCEECSSEEECTTCEECTTCEEEETEEEESCEECTTCEEEESCEEESEE
T ss_pred EEeeceeecCceEecCCEEEeecccccccccccccCCceeecCCcEEccccccCCeEEEccceecCCcEEeccceecCce
Confidence 2223333444445555566666666666677777777777777777777
Q ss_pred ECCCCEECCCcEE
Q 022113 250 IGWHSTVGQWARV 262 (302)
Q Consensus 250 i~~~~~i~~~~~i 262 (302)
||++|.||+++.+
T Consensus 389 Ig~~v~IG~g~i~ 401 (501)
T 3st8_A 389 IGEYSNIGASSVF 401 (501)
T ss_dssp ECSSCEECTTCEE
T ss_pred EcCCCEECCCEEE
Confidence 7777777776544
No 4
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=100.00 E-value=7.2e-33 Score=253.00 Aligned_cols=262 Identities=22% Similarity=0.385 Sum_probs=199.3
Q ss_pred EEEEEecCC-CCCChHHHHHcHhhhccCCCCcEEEEeCCeecC--cCHHHHHHHHHHcCCcEEEEEEeCCCCCCcceEEE
Q 022113 15 KIICSQETE-PLGTAGPLALARDKLIDDTGEPFFVLNSDVISE--YPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVM 91 (302)
Q Consensus 15 ~i~~~~~~~-~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~~--~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~v~~ 91 (302)
++.++.+++ ++|++++++.+++ . ++|+++.+|+++. .+++++++ ..+.++++.+.+++..|+.+..
T Consensus 67 ~i~~~~~~~~~~g~~~~l~~~~~---~---~~~lv~~~D~~~~~~~~~~~l~~-----~~~~~i~~~~~~~~~~~~~v~~ 135 (401)
T 2ggo_A 67 EISIVTQKDDIKGTGAAILSAKF---N---DEALIIYGDLFFSNEKEICNIIT-----LKENAIIGVKVSNPKDYGVLVL 135 (401)
T ss_dssp TCEEEECCTTCCBSTTTGGGCCC---S---SEEEEEETTEEESCSHHHHHHTT-----CSSEEEEEEECSCCSSSCEEEE
T ss_pred cEEEEeCCCCCCChHHHHHHhcc---C---CCEEEEeCccccccHHHHHHHHH-----hcCCEEEEEEcCCCcceeEEEE
Confidence 456777777 8999999998876 2 6899999999765 55776665 3567888888888888999988
Q ss_pred eCCCCcEEEEEecCCCCCCCeEEEEEEEeCHhhHhhccCCC------CCccccchHHHHhcCcEEEEEecCeeEecCChH
Q 022113 92 EESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRP------TSIEKEVFPKIALEGKLFAMVLPGFWMDIGQPR 165 (302)
Q Consensus 92 d~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~------~~~~~~~~~~l~~~~~v~~~~~~g~~~digt~~ 165 (302)
++ ++++..|.|||..+...++++|+|+|++++|+.++... ..+ .++++.+....++..+..+++|.|++||+
T Consensus 136 ~~-~g~v~~~~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~g~~v~~~~~~~~~~dI~t~e 213 (401)
T 2ggo_A 136 DN-QNNLSKIIEKPEIPPSNLINAGIYKLNSDIFTYLDKISISERGELEL-TDAINLMAKDHRVKVIEYEGYWMDIGKPW 213 (401)
T ss_dssp CT-TSSEEEEECSCSSCSCSEEEEEEEEEETHHHHHHHHSCCCSSSCBCH-HHHHHHHHHHSCEEEEECCSCEEECCSHH
T ss_pred CC-CCeEEEEEECCCCCCCcEEEEEEEEEcHHHHHHhhhcCcCCCCceEH-HHHHHHHHCCCcEEEEEecceEEcCCCHH
Confidence 75 68999999999777778999999999999998774221 112 34455552235888888889999999999
Q ss_pred HHHHHHHHHHHhhc-cc------------------cccccccCceEecceEEcCCcEECCCCEECCCcEECCCCEECCCc
Q 022113 166 DYITGLRLYLDSLR-KK------------------SSLKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGV 226 (302)
Q Consensus 166 ~~~~a~~~~l~~~~-~~------------------~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~ 226 (302)
+|.+++..++.... .. ..+.+.+++.|.+++.|++++.|+++|.|+++++||++|.|++++
T Consensus 214 dl~~a~~~l~~~~~~~~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~ 293 (401)
T 2ggo_A 214 NIIDVNKWALDNLVFSQNLGNVEDNVKIKGKVIIEEDAEIKSGTYIEGPVYIGKGSEIGPNSYLRPYTILVEKNKIGASV 293 (401)
T ss_dssp HHHHHHHHHHHHTCCCEECSEECSSCEEESCEEECTTCEECTTCEEESSEEECTTCEECSSCEECTTEEECSSCEEEETC
T ss_pred HHHHHHHHHHHhcccccccceeCCCCEEcCCeEEcCCCEECCCCEEeCCeEECCCCEECCCCEEcCCcEECCCCEECCCC
Confidence 99999988776533 11 112233445555666667777777777777778888888888888
Q ss_pred EEeceEEccCCEECCCcEEeccEECCCCEECCCcEEc------------------------cCcEECCCcEECCceEEcC
Q 022113 227 RLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVE------------------------NMTILGEDVHVCDEIYSNG 282 (302)
Q Consensus 227 ~i~~~~i~~~~~i~~~~~i~~~~i~~~~~i~~~~~i~------------------------~~~~i~~~~~v~~~~~v~~ 282 (302)
.|.+++|++++.|++++.+++++||++++|++++.|. .+++||++|.||++++|.+
T Consensus 294 ~i~~~~i~~~~~i~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~v~Ig~~~~Ig~~~~I~~ 373 (401)
T 2ggo_A 294 EVKESVIMEGSKIPHLSYVGDSVIAEDVNFGAGTLIANLRFDEKEVKVNVKGKRISSGRRKLGAFIGGHVRTGINVTILP 373 (401)
T ss_dssp EEESEEECTTCEEEESCEEESCEECTTCEECTTCEECCSCTTCSCCEEEETTEEEECSCSSCCCEECTTCEECTTCEECT
T ss_pred EEecCEEcCCcEECCCceEcceEECCCcEECCCcEEcCcccCCCceeEEECCceEEecccccCcEECCCeEECCCcEEcC
Confidence 8888899999999999999899999999999988886 2677777777777776666
Q ss_pred CeEecCc
Q 022113 283 GVVLPHK 289 (302)
Q Consensus 283 ~~v~~~~ 289 (302)
++.++.+
T Consensus 374 gv~Ig~~ 380 (401)
T 2ggo_A 374 GVKIGAY 380 (401)
T ss_dssp TCEECTT
T ss_pred CcEECCC
Confidence 6555443
No 5
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=100.00 E-value=2.9e-31 Score=247.09 Aligned_cols=262 Identities=21% Similarity=0.278 Sum_probs=198.4
Q ss_pred EEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCe--ecCcCHHHHHHHHHHcCCcEEEEEEeCCCCCCcceEEEe
Q 022113 15 KIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDV--ISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVME 92 (302)
Q Consensus 15 ~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~--l~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~v~~d 92 (302)
.+.|+.+++++||+++++.+++++... .+.|++++||+ +.+.+++++++.|++.++++++++.+.+++..||.+.+|
T Consensus 75 ~i~~v~~~~~~G~~~sl~~a~~~~~~~-~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~~~~~~~~~~g~v~~d 153 (468)
T 1hm9_A 75 QTEFVTQSEQLGTGHAVMMTEPILEGL-SGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETDNPFGYGRIVRN 153 (468)
T ss_dssp SSEEEECSSCCCHHHHHHTTHHHHTTC-CSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECSCCTTSCEEEEC
T ss_pred CcEEEeCCccCChHHHHHHHHHHhccC-CCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEEeccCCCCceeEEEEC
Confidence 456777888899999999999998521 37899999999 557789999999998888899999988888899999988
Q ss_pred CCCCcEEEEEecCCC----CCCCeEEEEEEEeCHhhH-hhccCCC------CCccccchHHHHhc-CcEEEEEecCeeEe
Q 022113 93 ESTGKVEKFVEKPKL----FVGNKINAGIYLLNPAVL-DRIELRP------TSIEKEVFPKIALE-GKLFAMVLPGFWMD 160 (302)
Q Consensus 93 ~~~~~v~~~~ekp~~----~~~~~~~~Giy~~~~~~l-~~l~~~~------~~~~~~~~~~l~~~-~~v~~~~~~g~~~d 160 (302)
+ ++++..|.|||.. ....++++|+|+|+++.| +.++... .....++++.+++. .++.++..+++|.+
T Consensus 154 ~-~g~v~~~~ek~~~~~~~~~~~~~~~Giy~f~~~~l~~~l~~~~~~~~~~~~~~~d~~~~l~~~g~~v~~~~~~g~~~~ 232 (468)
T 1hm9_A 154 D-NAEVLRIVEQKDATDFEKQIKEINTGTYVFDNERLFEALKNINTNNAQGEYYITDVIGIFRETGEKVGAYTLKDFDES 232 (468)
T ss_dssp T-TCCEEEEECTTTCCTTGGGCCEEEEEEEEEEHHHHHHHHTTCCSCSTTCSCCTTHHHHHHHHHTCCEEEEECSSGGGG
T ss_pred C-CCCEEEEEECCCCChHHhcCeEEEEEEEEEEHHHHHHHHHhhccccCCCeEEHHHHHHHHHHCCCEEEEEEcCChHHh
Confidence 6 7899999999752 135789999999999844 5554211 12235667777766 48999999999976
Q ss_pred --cCChHHHHHHHHHHHHhhccc----ccccccc-CceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcEEeceEE
Q 022113 161 --IGQPRDYITGLRLYLDSLRKK----SSLKLAT-GANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTV 233 (302)
Q Consensus 161 --igt~~~~~~a~~~~l~~~~~~----~~~~~~~-~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~~~~i 233 (302)
+++|++|..++..+....... ....+++ .+.+.+++.|++++.|++++.|++++.||++|.|++++.|.++.|
T Consensus 233 i~i~t~~dl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~i 312 (468)
T 1hm9_A 233 LGVNDRVALATAESVMRRRINHKHMVNGVSFVNPEATYIDIDVEIAPEVQIEANVILKGQTKIGAETVLTNGTYVVDSTI 312 (468)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGCEECTTCEECTTCEECSSCEEESSCEECTTCEECTTCEEESCEE
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEECCCeeEECCCcEECCCCEECCCcEECCCCEECCCCEECCCCEEeccEE
Confidence 559999999887655432210 0111232 456777777777777777787777888888888888888888888
Q ss_pred ccCCEECCCcEEeccEECCCCEECCCcEEccCcEECCCcEECCceE
Q 022113 234 MRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIY 279 (302)
Q Consensus 234 ~~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~ 279 (302)
+++|.|+ ++.+.+++|++++.|++++.|.++++||++++|++++.
T Consensus 313 g~~~~i~-~~~i~~~~Ig~~~~Ig~~~~i~~~~~ig~~~~Ig~~~~ 357 (468)
T 1hm9_A 313 GAGAVIT-NSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVE 357 (468)
T ss_dssp CTTCEEC-SCEEESCEECTTCEECSSCEECSSCEECTTCEEEEEEE
T ss_pred eCCcEEE-EEEEeccccCCCcEECCceEEecCcEECCccEECCCcE
Confidence 8888887 78887788888888888777776777777776665444
No 6
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=99.97 E-value=1.9e-29 Score=233.98 Aligned_cols=260 Identities=18% Similarity=0.270 Sum_probs=202.1
Q ss_pred EEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCe--ecCcCHHHHHHHHHHcCCcEEEEEEeCCCCCCcceEEEe
Q 022113 15 KIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDV--ISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVME 92 (302)
Q Consensus 15 ~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~--l~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~v~~d 92 (302)
.++|+.+++++||+++++.+++++.. .+.+++++||+ +.+.+++++++.|.+ .+++++..+.+++..||.+..+
T Consensus 70 ~~~~v~~~~~~g~~~~~~~~~~~~~~--~~~vlv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~~~~~~g~v~~~ 145 (456)
T 2v0h_A 70 QVNWVLQTEQLGTAHAVQQAAPFFKD--NENIVVLYGDAPLITKETLEKLIEAKPE--NGIALLTVNLDNPTGYGRIIRE 145 (456)
T ss_dssp CCEEEECSCCCCHHHHHHHHGGGCCT--TSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEECSSCTTSCEEEEE
T ss_pred CcEEEeCCCCCCcHHHHHHHHHhcCC--CCeEEEEcCCcceeCHHHHHHHHHHHhc--CCEEEEEeecCCCCccceEEEc
Confidence 46677788899999999999998853 37899999999 456779999998865 5788888888888889998887
Q ss_pred CCCCcEEEEEecCCCC----CCCeEEEEEEEeCHhhH-hhccCCC------CCccccchHHHHhc-CcEEEEEecCe--e
Q 022113 93 ESTGKVEKFVEKPKLF----VGNKINAGIYLLNPAVL-DRIELRP------TSIEKEVFPKIALE-GKLFAMVLPGF--W 158 (302)
Q Consensus 93 ~~~~~v~~~~ekp~~~----~~~~~~~Giy~~~~~~l-~~l~~~~------~~~~~~~~~~l~~~-~~v~~~~~~g~--~ 158 (302)
++++..|.|+|... ...++++|+|+|+++.| +.++... .....++++.+... .++..+..+++ |
T Consensus 146 --~g~v~~~~ek~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~~~~~~g~~v~~~~~~~~~~~ 223 (456)
T 2v0h_A 146 --NGNVVAIVEQKDANAEQLNIKEVNTGVMVSDGASFKKWLARVGNNNAQGEYYLTDLIALANQDNCQVVAVQATDVMEV 223 (456)
T ss_dssp --TTEEEEEECTTTCCHHHHTCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCCCCGGGHHHHHHHTTCCEEEEECSCTGGG
T ss_pred --CCcEEEEEECCCCChhHhcCcEEEEEEEEEEHHHHHHHHHHhccccccccEEHHHHHHHHHHcCCEEEEEEeCCcceE
Confidence 68999999987632 34789999999999854 5553211 11224566666665 47888888765 5
Q ss_pred EecCChHHHHHHHHHHHHhhccc---ccc-cccc-CceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcEEeceEE
Q 022113 159 MDIGQPRDYITGLRLYLDSLRKK---SSL-KLAT-GANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTV 233 (302)
Q Consensus 159 ~digt~~~~~~a~~~~l~~~~~~---~~~-~~~~-~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~~~~i 233 (302)
++++||++|.+++..+....... ... .+++ .+.+++++.+++++.|+++|.|+++++||++|.|++++.|.++.|
T Consensus 224 ~~I~tpeDl~~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~i 303 (456)
T 2v0h_A 224 EGANNRLQLAALERYFQNKQASKLLLEGVMIYDPARFDLRGTLEHGKDVEIDVNVIIEGNVKLGDRVKIGTGCVLKNVVI 303 (456)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEEEEEEEECSSCEECSSEEEEEEEEECTTCEECTTCEEEEEEE
T ss_pred EeCCCHHHHHHHHHHHHHHHHHHHHHcCCEEECCCccEEcCceEECCCCEEcCCcEEcCCcEECCCCEECCCCEEEeEEE
Confidence 69999999999887655432211 111 1233 567888899999999999999988999999999999999999999
Q ss_pred ccCCEECCCcEEeccEECCCCEECCCcEEccCcEECCCcEECCceEE
Q 022113 234 MRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYS 280 (302)
Q Consensus 234 ~~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v 280 (302)
+++|.|+++++|.+++||+++.|++++.|.++++||+++.||+++.+
T Consensus 304 g~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~~ig~~~~ig~~~~i 350 (456)
T 2v0h_A 304 GNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAELAAETHVGNFVEI 350 (456)
T ss_dssp CTTCEECSSCEEEEEEECTTCEECSSEEECTTCEECTTCEEEEEEEE
T ss_pred eCCCEEcCCeEEccCcCCCCcEECCccEECCCCEECCCCEECCCCEE
Confidence 99999999999988889999999988888877777777776665544
No 7
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=99.97 E-value=2.2e-29 Score=233.70 Aligned_cols=261 Identities=21% Similarity=0.265 Sum_probs=204.6
Q ss_pred cEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCe--ecCcCHHHHHHHHHHcCCcEEEEEEeCCCCCCcceEEE
Q 022113 14 IKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDV--ISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVM 91 (302)
Q Consensus 14 ~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~--l~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~v~~ 91 (302)
..+.++.+++.+||+++++.+++++.. .+.+++++||+ +.+.++.++++.|.+ .+++++..+..++..||.+..
T Consensus 72 ~~~~~v~~~~~~g~~~~i~~~~~~~~~--~~~~lv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~~~~~~g~v~~ 147 (459)
T 4fce_A 72 PSLNWVLQAEQLGTGHAMQQAAPHFAD--DEDILMLYGDVPLISVDTLQRLLAAKPE--GGIGLLTVKLDNPSGYGRIVR 147 (459)
T ss_dssp ---CEEECSSCCCHHHHHHHHGGGSCT--TSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEECSCCTTSCEEEE
T ss_pred CCcEEEeCCCCCCcHHHHHHHHHhcCC--CCcEEEEeCCcccCCHHHHHHHHHHHhh--CCEEEEEEecCCCCcccEEEe
Confidence 356777788899999999999999863 37899999999 556779999998864 567888888888889999988
Q ss_pred eCCCCcEEEEEecCCC----CCCCeEEEEEEEeCHhhH-hhccCC------CCCccccchHHHHhc-CcEEEEEecCee-
Q 022113 92 EESTGKVEKFVEKPKL----FVGNKINAGIYLLNPAVL-DRIELR------PTSIEKEVFPKIALE-GKLFAMVLPGFW- 158 (302)
Q Consensus 92 d~~~~~v~~~~ekp~~----~~~~~~~~Giy~~~~~~l-~~l~~~------~~~~~~~~~~~l~~~-~~v~~~~~~g~~- 158 (302)
+ ++++..+.|+|.. ....++++|+|+|+++.| +.++.. ......+.+..+.+. .++..+..+++|
T Consensus 148 ~--~g~v~~~~ek~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~~~~~~g~~v~~~~~~~~~~ 225 (459)
T 4fce_A 148 E--NGDVVGIVEHKDASDAQREINEINTGILVANGRDLKRWLSLLDNNNAQGEFYITDIIALAHADGKKIATVHPTRLSE 225 (459)
T ss_dssp E--TTEEEEEECGGGCCTTGGGCCEEEEEEEEEEHHHHHHHHHTCCCCSTTCSCCTTHHHHHHHHTTCCEEEECCSSGGG
T ss_pred C--CCcEEEEEECCCCChHHhhccEEEEEEEEEEHHHHHHHHHHhCccccCCcEEHHHHHHHHHHCCCeEEEEEcCCHHH
Confidence 7 6899999998642 245789999999999866 444321 111224455666655 578888888766
Q ss_pred -EecCChHHHHHHHHHHHHhhcc-----ccccccccCceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcEEeceE
Q 022113 159 -MDIGQPRDYITGLRLYLDSLRK-----KSSLKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCT 232 (302)
Q Consensus 159 -~digt~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~~~~ 232 (302)
+++++|++|..++..+...... ...-..++...+++++.+++++.|+++|.|.+++.||++|.|++++.|.++.
T Consensus 226 ~~~I~tp~Dl~~ae~~l~~~~~~~l~~~~~~~~~p~~~~~~~~~~ig~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~ 305 (459)
T 4fce_A 226 VEGVNNRLQLSALERVFQTEQAEKLLLAGVMLLDPSRFDLRGELTHGRDITIDTNVIIEGHVILGDRVRIGTGCVLKNCV 305 (459)
T ss_dssp GCCCSSHHHHHHHHHHHHHHHHHHHHHHTCEESCGGGEEEEEEEEECSSCEECTTEEEEEEEEECTTCEECTTCEEESCE
T ss_pred hhCCCCHHHHHHHHHHHHHHHHHHHHhCCcEEeCCCeEEEeCcEEECCCcEECCCeeeccceEECCCCEECCCCEEeccE
Confidence 6799999999998766544322 1111123345678888999999999999998899999999999999999999
Q ss_pred EccCCEECCCcEEeccEECCCCEECCCcEEccCcEECCCcEECCceEE
Q 022113 233 VMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYS 280 (302)
Q Consensus 233 i~~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v 280 (302)
|+++|.|+++++|++++||+++.|+++++|.++++|+++++||+++.+
T Consensus 306 Ig~~~~I~~~~~i~~~~Ig~~~~ig~~~~i~~~~~ig~~~~Ig~~~~i 353 (459)
T 4fce_A 306 IGDDSEISPYTVLEDARLDANCTVGPFARLRPGAELAEGAHVGNFVEI 353 (459)
T ss_dssp ECTTCEECSSCEEESCEECTTCEECSSEEECTTCEECTTCEEEEEEEE
T ss_pred ECCCCEECCCcEEeCCEECCCCEECCccEECCCcEECCCcEECCCeEE
Confidence 999999999999999999999999999999888889888888887654
No 8
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=99.88 E-value=2.6e-22 Score=176.20 Aligned_cols=170 Identities=17% Similarity=0.214 Sum_probs=137.4
Q ss_pred HHHHHhhcCCcEEEEEecC---------------CCCCChHHHHHcHhhhccCCCCcEEEEeCCeecCcC-HHHHHHHHH
Q 022113 4 FLKEFEAKLGIKIICSQET---------------EPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYP-FAEMIEFHK 67 (302)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~~---------------~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~~~~-l~~~~~~~~ 67 (302)
++++ +..|+.+++|+.|+ +++||++||++|++++ + ++|+|++||++++.+ +++++++|.
T Consensus 66 ~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~al~~a~~~i-~---~~~lV~~gD~l~~~~~~~~l~~~~~ 140 (303)
T 3pnn_A 66 KILT-KYEGRIPVELVFQELDRLPEGFSCPEGREKPWGTNHAVLMGRDAI-R---EPFAVINADDFYGRNGFEVLARKLM 140 (303)
T ss_dssp HTHH-HHTTTSCEEEEECCTTCCCTTCCCCTTCCSCCCHHHHHHTTTTTC-C---SCEEEEESSCBCCHHHHHHHHHHHH
T ss_pred HHHH-HhccCCcEEEEecccccccccccccccccccCCcHHHHHHHHHhc-C---CCEEEEECCeecCHHHHHHHHHHHH
Confidence 4444 34568889999987 7899999999999998 3 799999999999887 999999997
Q ss_pred H---cCCcEEEEEEeCCCC-CCc-----ceEEEeCCCCcEEEEEecCCC-------------------CCCCeEEEEEEE
Q 022113 68 A---HGGEASIMVTKVDEP-SKY-----GVVVMEESTGKVEKFVEKPKL-------------------FVGNKINAGIYL 119 (302)
Q Consensus 68 ~---~~~~~~l~~~~~~~~-~~~-----g~v~~d~~~~~v~~~~ekp~~-------------------~~~~~~~~Giy~ 119 (302)
+ ++++++++..+.+++ ..| |++.+|+ +|+|++|.|||.. ..++++++|+|+
T Consensus 141 ~~~~~~~~~~v~~~~~~~~~~~~g~~~~G~v~~d~-~g~v~~i~Ekp~~~~~~~~~~~~~~~g~~~~~~~~~~i~~GiY~ 219 (303)
T 3pnn_A 141 TLEGKQGEYCMVGYRVGNTLSESGGVSRGVCQVDE-KHLLTGVVERTGIERTDGTISFRDETGKICTLAEDAPVSMNMWG 219 (303)
T ss_dssp TTTTCSSEEEEEEEEGGGSCBTTBCEEEEEEEECT-TSBEEEEEEEEEEEEETTEEEEECTTSCEEEECTTCEEEEEEEE
T ss_pred HhccccCceEEEEEECCCccCccCceeeeeEeeCC-CCcEEEEEECCCCccccccccccccccccccCCCCCEEEEEEEE
Confidence 6 567899999988877 777 5788875 7899999999853 246799999999
Q ss_pred eCHhhHhhccC--------C-----CCCccccchHHHHhcC--cEEEEEecCeeEecCChHHHHHHHHHHHHhhc
Q 022113 120 LNPAVLDRIEL--------R-----PTSIEKEVFPKIALEG--KLFAMVLPGFWMDIGQPRDYITGLRLYLDSLR 179 (302)
Q Consensus 120 ~~~~~l~~l~~--------~-----~~~~~~~~~~~l~~~~--~v~~~~~~g~~~digt~~~~~~a~~~~l~~~~ 179 (302)
|++++|+.++. . ......+.++.+++++ ++.++.++++|+|+|+|+++.++++.+.+...
T Consensus 220 f~~~~~~~l~~~~~~~l~~~~~~~~~e~~l~d~i~~li~~g~~~v~~~~~~g~w~dIgt~~dl~~a~~~l~~~~~ 294 (303)
T 3pnn_A 220 FTPDYFDYSEELFINFLNAHGQEPKSEFFIPFVVNDLIRSGRASVEVLDTTARWFGVTYSDDRPGVVAKLRELTE 294 (303)
T ss_dssp ECTHHHHHHHHHHHHHHHHHTTCSSCCCCHHHHHHHHHHHTSCEEEEEECSCCCBCCSSGGGHHHHHHHHHHHHH
T ss_pred ECHHHHHHHHHHHHHHHHhcCCCcCCcEEhHHHHHHHHHcCCCcEEEEEeCCceECCCCHHHHHHHHHHHHHHHH
Confidence 99999987752 1 1112245566777776 79999999999999999999999887765443
No 9
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=99.88 E-value=1e-21 Score=169.65 Aligned_cols=161 Identities=22% Similarity=0.311 Sum_probs=139.5
Q ss_pred hcCCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCeecCcCHHHHHHHHHHcCCcEEEEEEeCCCCCCcceE
Q 022113 10 AKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVV 89 (302)
Q Consensus 10 ~~~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~v 89 (302)
..|++++.|..|++++||+++|+.+++++.. ++|++++||++++.++.++++.|.++++++++++.+.+++..||++
T Consensus 93 ~~~~~~i~~~~~~~~~G~~~al~~a~~~~~~---~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~v 169 (269)
T 4ecm_A 93 QEFGVSFTYRVQDKAGGIAQALGLCEDFVGN---DRMVVILGDNIFSDDIRPYVEEFTNQKEGAKVLLQSVDDPERFGVA 169 (269)
T ss_dssp GGGTCEEEEEECSSCCCHHHHHHTTHHHHTT---SEEEEEETTEEESSCSHHHHHHHHTSSSSEEEEEEECSCGGGSEEE
T ss_pred cccCceEEEeeCCccCcHHHHHHHHHHhcCC---CcEEEEeCCccCccCHHHHHHHHHhcCCCeEEEEEECCCCCCceEE
Confidence 3688999999999999999999999999863 7999999999999999999999998888999999998888999999
Q ss_pred EEeCCCCcEEEEEecCCCCCCCeEEEEEEEeCHhhHhhccCCCCC----c-cccchHHHHhcCcEEEEEecCeeEecCCh
Q 022113 90 VMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTS----I-EKEVFPKIALEGKLFAMVLPGFWMDIGQP 164 (302)
Q Consensus 90 ~~d~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~----~-~~~~~~~l~~~~~v~~~~~~g~~~digt~ 164 (302)
..+ +++++.|.|||..+...++++|+|+|++++|+.++....+ + ..++++.++.++++.++..+++|.|++||
T Consensus 170 ~~d--~g~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~ge~~l~d~l~~l~~~g~v~~~~~~~~~~dIgt~ 247 (269)
T 4ecm_A 170 NIQ--NRKIIEIEEKPKEPKSSYAVTGIYLYDSKVFSYIKELKPSARGELEITDINNWYLKRGVLTYNEMSGWWTDAGTH 247 (269)
T ss_dssp EEE--TTEEEEEEESCSSCSCSEEEEEEEEECTTHHHHHTSCCBCTTSCBCHHHHHHHHHHTTCEEEEECCSCEEECSSH
T ss_pred EEc--CCEEEEEEECCCCCCCcEEEEEEEEECHHHHHhhhhcCCCCCCeeeHHHHHHHHHHcCCEEEEEeCCEEEeCCCH
Confidence 988 4899999999977777899999999999999877532211 1 24566777778899999999999999999
Q ss_pred HHHHHHHHHHH
Q 022113 165 RDYITGLRLYL 175 (302)
Q Consensus 165 ~~~~~a~~~~l 175 (302)
++|.+++..++
T Consensus 248 ~dl~~a~~~l~ 258 (269)
T 4ecm_A 248 VSLQRANALAR 258 (269)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHH
Confidence 99999987654
No 10
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=99.87 E-value=3e-21 Score=167.73 Aligned_cols=162 Identities=20% Similarity=0.293 Sum_probs=134.7
Q ss_pred CCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCeecCcC-----HHHHHHHHHHcCCcEEEEEEeC--CCCC
Q 022113 12 LGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYP-----FAEMIEFHKAHGGEASIMVTKV--DEPS 84 (302)
Q Consensus 12 ~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~~~~-----l~~~~~~~~~~~~~~~l~~~~~--~~~~ 84 (302)
+|.++.|+.|++++||+++|++|++++.+ ++|+|++||++++.+ ++++++.|.++++ .++++... +++.
T Consensus 93 ~~~~i~~~~~~~~~Gt~~al~~a~~~l~~---~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~~-~~v~~~~~~~~~~~ 168 (281)
T 3juk_A 93 EKCCFSYVRQKQMKGLGHAILTGEALIGN---EPFAVILADDLCISHDHPSVLKQMTSLYQKYQC-SIVAIEEVALEEVS 168 (281)
T ss_dssp HHCEEEEEECSSCCCHHHHHHHTHHHHCS---SCEEEECTTEEEECTTSCCHHHHHHHHHHHHCS-CEEEEEECCTTTGG
T ss_pred cCccEEEEecCCCCCcHHHHHHHHHHcCC---CCEEEEeCCeeccCccchHHHHHHHHHHHHcCC-CEEEEEEechhhcc
Confidence 46889999999999999999999999964 789999999999888 9999999988776 66666665 5678
Q ss_pred CcceEEEeC-CCC--cEEEEEecCCC--CCCCeEEEEEEEeCHhhHhhccCCCCCc-----cccchHHHHhcCcEEEEEe
Q 022113 85 KYGVVVMEE-STG--KVEKFVEKPKL--FVGNKINAGIYLLNPAVLDRIELRPTSI-----EKEVFPKIALEGKLFAMVL 154 (302)
Q Consensus 85 ~~g~v~~d~-~~~--~v~~~~ekp~~--~~~~~~~~Giy~~~~~~l~~l~~~~~~~-----~~~~~~~l~~~~~v~~~~~ 154 (302)
.||++..++ .++ ++..|.|||.. ....++++|+|+|++++|+.++....+. ..++++.++.++++.++.+
T Consensus 169 ~~g~v~~~~~~~g~~~v~~~~Ekp~~~~~~~~~~~~GiYi~~~~~l~~l~~~~~~~~~e~~l~d~i~~l~~~~~v~~~~~ 248 (281)
T 3juk_A 169 KYGVIRGEWLEEGVYEIKDMVEKPNQEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALRTQAKRKRIIAYQF 248 (281)
T ss_dssp GSEEEEEEEEETTEEEEEEEEESCCTTTCSCSEEEEEEEEECTTHHHHHHTCCCCGGGSCCHHHHHHHHHHHSCCEEEEC
T ss_pred cCCEEEeccCCCCceEEeEEEECcCCCCCCcceeEEEEEEECHHHHHHHHhcCCCCCCceeHHHHHHHHHhcCCEEEEEe
Confidence 899998873 036 99999999973 4568999999999999998886532221 1456777777789999999
Q ss_pred cCeeEecCChHHHHHHHHHHHHh
Q 022113 155 PGFWMDIGQPRDYITGLRLYLDS 177 (302)
Q Consensus 155 ~g~~~digt~~~~~~a~~~~l~~ 177 (302)
+++|.|+|+|++|.+|+..+++.
T Consensus 249 ~g~~~dIgt~~d~~~a~~~l~~~ 271 (281)
T 3juk_A 249 KGKRYDCGSVEGYIEASNAYYKK 271 (281)
T ss_dssp CSEEEETTSHHHHHHHHHHHHHH
T ss_pred CCeEEcCCCHHHHHHHHHHHHhc
Confidence 99999999999999999877653
No 11
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.87 E-value=1.3e-23 Score=189.72 Aligned_cols=196 Identities=17% Similarity=0.195 Sum_probs=102.4
Q ss_pred EEEeCCeecCc--CHHHHHHHHHHcCCcEEEEEEeCCCCCCcceEEEeCCC-CcEEEEEecCCCCC-CCeEEEEEEEeCH
Q 022113 47 FVLNSDVISEY--PFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVMEEST-GKVEKFVEKPKLFV-GNKINAGIYLLNP 122 (302)
Q Consensus 47 lv~~gD~l~~~--~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~v~~d~~~-~~v~~~~ekp~~~~-~~~~~~Giy~~~~ 122 (302)
|+-.+|+++.+ +|++|+++|. +++.. .+++..+|+..+++++ +++ .|.|||+... ..+.++|+|+|++
T Consensus 14 ~~~~~dhiy~m~~~l~~i~~~h~-----~tl~g--~~~~~~~Gv~~ld~a~~g~I-~F~ekPk~~~~~~~~~aGiyI~~~ 85 (374)
T 2iu8_A 14 LVPRGSHMSQSTYSLEQLADFLK-----VEFQG--NGATLLSGVEEIEEAKTAHI-TFLDNEKYAKHLKSSEAGAIIISR 85 (374)
T ss_dssp -------CCSCCEEHHHHHHHTT-----CEEES--CTTCEECEECCTTTCCTTEE-EECCSSSTHHHHHTCCCSEEEEEH
T ss_pred cccCccccccCcCcHHHHHHhhC-----CEEEC--CCcceEEEEeccccCCCCeE-EEEeCchhhhhhhcCCcEEEEeCh
Confidence 67789999987 8999999985 34443 4567788998887543 455 9999998642 2467899999999
Q ss_pred hhHhhccCCCCCccccchHHHHhcCcEEEEEecCeeEec--CChHHHHHHHHHHHHhhccccccccccCceEecceEEcC
Q 022113 123 AVLDRIELRPTSIEKEVFPKIALEGKLFAMVLPGFWMDI--GQPRDYITGLRLYLDSLRKKSSLKLATGANIVGNVLVHE 200 (302)
Q Consensus 123 ~~l~~l~~~~~~~~~~~~~~l~~~~~v~~~~~~g~~~di--gt~~~~~~a~~~~l~~~~~~~~~~~~~~~~i~~~~~i~~ 200 (302)
++++.+.. + .+.++ ++.+++..+|.+..+|++. .++..... ........+.+.+++.|.+++.|++
T Consensus 86 ~~l~~~~~----~-~~~~p-l~~~~~~~a~~~~~~~~~~~i~~~~~~i~------~~~~i~~~a~Ig~~~~I~~~~~I~~ 153 (374)
T 2iu8_A 86 TQFQKYRD----L-NKNFL-ITSESPSLVFQKCLELFITPVDSGFPGIH------PTAVIHPTAIIEDHVCIEPYAVVCQ 153 (374)
T ss_dssp HHHHTSTT----S-CSCEE-EESSCHHHHHHHHHTTTSCCCCCSCCSBC------TTCEECTTCEECTTCEECTTCEECT
T ss_pred hHhhhccc----c-ccceE-EEeCCHHHHHHHHHHHhccccccccCccC------CCCEECCCcEECCCCEECCCCEECC
Confidence 98853321 1 23333 3333333333333344443 12110000 0000112233444444445555555
Q ss_pred CcEECCCCEECCCcEECCCCEECCCcEEe-------ceEEccCCEECCCcEEe---------------------ccEECC
Q 022113 201 SAQIGEGCLIGPDVAVGPGCVVESGVRLS-------RCTVMRGVRIKKHACIS---------------------SSIIGW 252 (302)
Q Consensus 201 ~~~i~~~~~i~~~~~ig~~~~i~~~~~i~-------~~~i~~~~~i~~~~~i~---------------------~~~i~~ 252 (302)
++.||++|.|+++++|+++|.||++|.|. ++.|+++|.|+++++|+ .++|++
T Consensus 154 ~~~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~Ig~~~~~~~~~~~~~~~~i~~~g~v~Ig~ 233 (374)
T 2iu8_A 154 HAHVGSACHIGSGSVIGAYSTVGEHSYIHPRVVIRERVSIGKRVIIQPGAVIGSCGFGYVTSAFGQHKHLKHLGKVIIED 233 (374)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSEEECTTCEECTTCEEEEECSCEEEETTTEEEECCCCCCEEECT
T ss_pred CCEECCCCEECCCcEECCCcEECCceeeCCCcEEcccceECCCCEECCCCEECcCCcccccccCCceeEeeeeccEEECC
Confidence 55555555554444444444444444443 45555555555555552 256666
Q ss_pred CCEECCCcEE
Q 022113 253 HSTVGQWARV 262 (302)
Q Consensus 253 ~~~i~~~~~i 262 (302)
+|+||++++|
T Consensus 234 ~v~IG~~~~I 243 (374)
T 2iu8_A 234 DVEIGANTTI 243 (374)
T ss_dssp TCEECTTCEE
T ss_pred CCEECCCcEE
Confidence 6666666655
No 12
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.87 E-value=4.9e-23 Score=189.78 Aligned_cols=256 Identities=14% Similarity=0.189 Sum_probs=181.3
Q ss_pred cCCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEe----CCeecCcCHHHHHHHHHHc-----------CCcEEE
Q 022113 11 KLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLN----SDVISEYPFAEMIEFHKAH-----------GGEASI 75 (302)
Q Consensus 11 ~~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~----gD~l~~~~l~~~~~~~~~~-----------~~~~~l 75 (302)
.+|..++++.++.+|+|+++++.+.+.+ . + ++|++ +|....+++++++..|.++ +...++
T Consensus 110 ~~g~~vt~~~~~~pL~~a~~i~~~d~~~-~---~-t~V~~~~~kpd~~~~~~l~~l~~~h~~~~~g~~~~~~~ig~~~ti 184 (496)
T 3c8v_A 110 RKGQHFVCDGKMIPLHDDEVITIKDSFL-N---K-TLVHSNSHDPESPEEFTIRNTVAMPYANIHGSLTEGSFIGSFATV 184 (496)
T ss_dssp CTTCEEEETTEEEECSSCCEEEEESCEE-E---S-CEEESCCCCTTCTTEEEEESCEECTTCEEESCCEESCEECTTCEE
T ss_pred hcCCEEEEEecccchhHhhhHHhhhhcC-C---c-eEEeccccCCCCccccchHHHHHHHHHhhcCCcccceEeccccee
Confidence 3799999999999999999987766654 2 2 37888 6888777777777777652 123445
Q ss_pred EEEeCCCC--CCcceEEEeCCCCcEEEEEecCCCC--CCCeEEEEEEEeCHhhHhhccCCCCCccccchHHHHhcCcEEE
Q 022113 76 MVTKVDEP--SKYGVVVMEESTGKVEKFVEKPKLF--VGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALEGKLFA 151 (302)
Q Consensus 76 ~~~~~~~~--~~~g~v~~d~~~~~v~~~~ekp~~~--~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~v~~ 151 (302)
.+....++ ..++.+. .+++..+.++|... ..+.....+|.|+++.++.+..... ..+
T Consensus 185 ~L~~l~d~li~~~~~~~----~g~i~~~~~~pg~~~i~~~~~lnf~Y~f~~~~L~~~l~~~~------------~~n--- 245 (496)
T 3c8v_A 185 DLSTIHNSVVRYFSYVQ----TGELVGKCVEPGQIWIKSGDELEFHYSFDKAILDKYISQEA------------GSC--- 245 (496)
T ss_dssp ESCEEESCEECTTCEEE----SSEEESCEECTTEEEEECTTSEEEEEECCHHHHTTTCBCCT------------TSC---
T ss_pred eHHHHHHHHHHHHhhhc----CCceEEeeecCCceecccccccceEEEcCHHHHHHHHhhcc------------Ccc---
Confidence 55555565 5677662 46777777887531 1122344599999988865421100 000
Q ss_pred EEecCeeEec--CChHHHHHHHHHHH--HhhccccccccccCceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcE
Q 022113 152 MVLPGFWMDI--GQPRDYITGLRLYL--DSLRKKSSLKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVR 227 (302)
Q Consensus 152 ~~~~g~~~di--gt~~~~~~a~~~~l--~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~ 227 (302)
.++.|.|+ ..++++.+...... ........+.+.+++.+.+++.|++++.|+++|.| .+++||++|.|+++|.
T Consensus 246 --~~g~~~Dll~~~~~d~~~i~~~~~~~~~~~I~~~a~I~p~a~i~g~v~IG~~~~I~~~a~I-~~v~IG~~~~I~~~~~ 322 (496)
T 3c8v_A 246 --PTGVLMEFVEVRQEDFEEVFASGHMASGAGSASGASVSGYAVIKGDTVIGENVLVSQRAYL-DNAWMGKGSNAQENCY 322 (496)
T ss_dssp --CBSHHHHHHHTTTHHHHHHHHC--------CCTTCEECTTSEEESSCEECTTCEECTTCEE-EEEEECTTCEECTTCE
T ss_pred --ccceeeehhccchHHHHHHhhccccccCcccCCCcEECCCcEEeCCeEECCCCEECCCcEE-eceEecCCCEECCCce
Confidence 13334433 34444444322110 01111223556667777777888888888888888 6889999999999999
Q ss_pred EeceEEccCCEECCCcEEeccEECCCCEECCCcEEccC----cEECCCcEECCceEEc--CCeEecCccccc
Q 022113 228 LSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENM----TILGEDVHVCDEIYSN--GGVVLPHKEIKS 293 (302)
Q Consensus 228 i~~~~i~~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~----~~i~~~~~v~~~~~v~--~~~v~~~~~~~~ 293 (302)
|.+|+|+++|.|++++.+.+++||++|+||+++.|.++ ++||++|.||+++++. ++..+|+..+-.
T Consensus 323 I~~~vIG~~~~Ig~~a~I~gv~IGd~v~IG~~a~I~~~~~~~v~IG~~a~IGagsvV~~~~~~~I~~~s~v~ 394 (496)
T 3c8v_A 323 IINSRLERNCVTAHGGKIINAHLGDMIFTGFNSFLQGSESSPLKIGDGCVVMPHTIIDLEEPLEIPAGHLVW 394 (496)
T ss_dssp EEEEEEEESCEECTTCEEESEEEEETCEECTTCEEECCSSSCEEECTTCEECTTCEEECSSCEEECSSEEEC
T ss_pred EeceEeCCCCEECCCcEEcCceECCCcEECCCCEEeCCCCcceEECCCCEECCCCEEecCCCcEeCCCCEEE
Confidence 99999999999999999999999999999999999999 9999999999999998 788888776544
No 13
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=99.82 E-value=8.2e-19 Score=153.08 Aligned_cols=162 Identities=20% Similarity=0.327 Sum_probs=132.9
Q ss_pred hcCCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCee-cCcCHHHHHHHHHHcCCcEEEEEEeCCCCCCcce
Q 022113 10 AKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVI-SEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGV 88 (302)
Q Consensus 10 ~~~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l-~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~ 88 (302)
++||+++.|..|+++.||+++++.+++++.. ++++++.||.+ .+.++.++++.|.+.+.++++++.+..+|..||+
T Consensus 71 ~~~g~~i~~~~~~~~~G~~~al~~a~~~i~~---~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~dp~~~g~ 147 (293)
T 1fxo_A 71 SNWGLDLQYAVQPSPDGLAQAFLIGESFIGN---DLSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYHVLDPERYGV 147 (293)
T ss_dssp GGGTCEEEEEECSSCCCGGGHHHHTHHHHTT---SEEEEEETTEEEECTTHHHHHHHHHTCCSSEEEEEEECSCGGGSEE
T ss_pred cccCceEEEeeCCCCCCHHHHHHHHHHHhCC---CCEEEEECChhccCccHHHHHHHHHhcCCCcEEEEEECCCcccCcE
Confidence 3589999999999999999999999999863 78999999985 4678999999998777778888888888889999
Q ss_pred EEEeCCCCcEEEEEecCCCCCCCeEEEEEEEeCHhhHhhccCCCCC----c-cccchHHHHhcCcEEEEEec-Ce-eEec
Q 022113 89 VVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTS----I-EKEVFPKIALEGKLFAMVLP-GF-WMDI 161 (302)
Q Consensus 89 v~~d~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~----~-~~~~~~~l~~~~~v~~~~~~-g~-~~di 161 (302)
+.+|+ ++++++|.|||..+.+++.++|+|+|++++++.+..-..+ + ..+.+..+++.+++.++... ++ |.|+
T Consensus 148 v~~d~-~g~v~~~~ekp~~~~s~~~~~Giy~~~~~~l~~~~~~~~~~~ge~~~td~~~~~l~~g~~~v~~~~~g~~w~Di 226 (293)
T 1fxo_A 148 VEFDQ-GGKAISLEEKPLEPKSNYAVTGLYFYDQQVVDIARDLKPSPRGELEITDVNRAYLERGQLSVEIMGRGYAWLDT 226 (293)
T ss_dssp EEECT-TSCEEEEEESCSSCSSSEEEEEEEEECTTHHHHHHHCCCCTTSSCCHHHHHHHHHHTTCEEEEECCTTSEEEEC
T ss_pred EEECC-CCcEEEEEECCCCCCCCeEEEEEEEEcHHHHHHHHhcCcccCCceeHHHHHHHHHhcCCeEEEEeCCCCEEEcC
Confidence 99986 7999999999977677899999999999998766421111 1 13456667777888877775 74 9999
Q ss_pred CChHHHHHHHHHHH
Q 022113 162 GQPRDYITGLRLYL 175 (302)
Q Consensus 162 gt~~~~~~a~~~~l 175 (302)
+||++|.++...+.
T Consensus 227 gt~edl~~a~~~~~ 240 (293)
T 1fxo_A 227 GTHDSLLEAGQFIA 240 (293)
T ss_dssp CSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 99999999977553
No 14
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=99.82 E-value=5.6e-19 Score=154.25 Aligned_cols=162 Identities=22% Similarity=0.345 Sum_probs=132.4
Q ss_pred hcCCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCee-cCcCHHHHHHHHHHcCCcEEEEEEeCCCCCCcce
Q 022113 10 AKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVI-SEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGV 88 (302)
Q Consensus 10 ~~~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l-~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~ 88 (302)
++||+++.|+.|+.+.||+++++.+++++.. ++++++.||++ .+.++.++++.|.+.+.+++++..+..+|..||+
T Consensus 72 ~~~g~~i~~~~~~~~~G~~~al~~a~~~i~~---~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~dp~~yg~ 148 (296)
T 1mc3_A 72 SEFGIQLEYAEQPSPDGLAQAFIIGETFLNG---EPSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQVMDPERFGV 148 (296)
T ss_dssp GGGTCEEEEEECSSCCCSTHHHHHTHHHHTT---SCEEEEETTEEEECSSCHHHHHHHTTCCSSEEEEEEECSCCSSSBB
T ss_pred cccCceEEEeccCCCCCHHHHHHHHHHHhCC---CCEEEEECCccccccCHHHHHHHHHHcCCCCEEEEEECCCcccCCE
Confidence 4589999999999999999999999999863 68888889984 4778999999997766778888888888999999
Q ss_pred EEEeCCCCcEEEEEecCCCCCCCeEEEEEEEeCHhhHhhccCCCCCcc-----ccchHHHHhcCcEEEEEec-Ce-eEec
Q 022113 89 VVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIE-----KEVFPKIALEGKLFAMVLP-GF-WMDI 161 (302)
Q Consensus 89 v~~d~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~-----~~~~~~l~~~~~v~~~~~~-g~-~~di 161 (302)
+.+|+ ++++++|.|||..+.+++.++|+|+|++++++.+..-..+.. .+++..+++.+++.++... ++ |.|+
T Consensus 149 v~~d~-~g~v~~~~ekp~~~~s~~~~~Giy~~~~~~l~~~~~~~~~~~ge~~~td~~~~~l~~g~~~v~~~~~g~~w~Di 227 (296)
T 1mc3_A 149 VEFDD-NFRAISLEEKPKQPKSNWAVTGLYFYDSKVVEYAKQVKPSERGELEITSINQMYLEAGNLTVELLGRGFAWLDT 227 (296)
T ss_dssp CEEET-TEEEEECCBSCSSCSCSEEEEEEEECCTHHHHHHHSCCCCSSSSCCHHHHHHHHHHTTCEEEEECCTTCEEEEC
T ss_pred EEECC-CCcEEEEEECCCCCCCCEEEEEEEEEcHHHHHHHHhcCccccCCccHHHHHHHHHhcCCeEEEEeCCCCEEEeC
Confidence 99986 789999999997777789999999999999877643221111 3445566777788777775 75 9999
Q ss_pred CChHHHHHHHHHHH
Q 022113 162 GQPRDYITGLRLYL 175 (302)
Q Consensus 162 gt~~~~~~a~~~~l 175 (302)
||+++|.++...+.
T Consensus 228 gt~edl~~a~~~~~ 241 (296)
T 1mc3_A 228 GTHDSLIEASTFVQ 241 (296)
T ss_dssp CSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 99999999987654
No 15
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=99.81 E-value=1.4e-18 Score=152.47 Aligned_cols=159 Identities=25% Similarity=0.319 Sum_probs=129.2
Q ss_pred CCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCeecC-----c---CHHHHHHHHHHcCCcEEEEEEeCCCC
Q 022113 12 LGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISE-----Y---PFAEMIEFHKAHGGEASIMVTKVDEP 83 (302)
Q Consensus 12 ~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~~-----~---~l~~~~~~~~~~~~~~~l~~~~~~~~ 83 (302)
+++++.|+.|+.++||+++|+.|++++.. ++|++++||++++ . ++.++++.|++.+. .++++.+.+++
T Consensus 100 ~~~~i~~~~~~~~~Gt~~al~~a~~~~~~---~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~~~-~~i~~~~~~~~ 175 (302)
T 2e3d_A 100 PHVTIMQVRQGLAKGLGHAVLCAHPVVGD---EPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGH-SQIMVEPVADV 175 (302)
T ss_dssp TTCEEEEEECSSCCCHHHHHHHTHHHHCS---SCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHHCC-EEEEEEECSCG
T ss_pred cCcceEEeeCCccCCHHHHHHHHHHHcCC---CcEEEEcCCccccCccccchHHHHHHHHHHHHhcCC-cEEEEEEccCC
Confidence 47899999999999999999999999853 7899999999876 2 79999999987766 77888887778
Q ss_pred CCcceEEEeC---CCC---cEEEEEecCCC--CCCCeEEEEEEEeCHhhHhhccCCCCC-----ccccchHHHHhcCcEE
Q 022113 84 SKYGVVVMEE---STG---KVEKFVEKPKL--FVGNKINAGIYLLNPAVLDRIELRPTS-----IEKEVFPKIALEGKLF 150 (302)
Q Consensus 84 ~~~g~v~~d~---~~~---~v~~~~ekp~~--~~~~~~~~Giy~~~~~~l~~l~~~~~~-----~~~~~~~~l~~~~~v~ 150 (302)
..||++..+. +++ ++..|.|||.. ....++++|+|+|++++|+.++....+ ...+.++.+++++++.
T Consensus 176 ~~yg~v~~~~~~~~~g~~~~v~~~~ekp~~~~~~~~~~~~Giyi~~~~~l~~l~~~~~~~~~~~~l~d~i~~l~~~~~v~ 255 (302)
T 2e3d_A 176 TAYGVVDCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRYVLSADIWPLLAKTPPGAGDEIQLTDAIDMLIEKETVE 255 (302)
T ss_dssp GGSEEEECTTCCCCTTCEEEECEEEESCCTTTCSCSEEEEEEEEECTTHHHHHTCCCC----CCCHHHHHHHHHHHSCEE
T ss_pred CCccEEEecccccCCCCceeEEEEEECCCCCccccceEEEEEEEECHHHHHHHHhhCCCCCCceehHHHHHHHHHhCCEE
Confidence 8899987631 256 89999999863 346799999999999999887643221 1234566667667999
Q ss_pred EEEecCeeEecCChHHHHHHHHHH
Q 022113 151 AMVLPGFWMDIGQPRDYITGLRLY 174 (302)
Q Consensus 151 ~~~~~g~~~digt~~~~~~a~~~~ 174 (302)
++.++++|.|+|+|++|.+++..+
T Consensus 256 ~~~~~~~~~DIgt~~d~~~a~~~~ 279 (302)
T 2e3d_A 256 AYHMKGKSHDCGNKLGYMQAFVEY 279 (302)
T ss_dssp EEECCSCEEECSSHHHHHHHHHHH
T ss_pred EEEeCCeEEcCCCHHHHHHHHHHH
Confidence 999999999999999999998544
No 16
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=99.81 E-value=1.5e-18 Score=151.42 Aligned_cols=162 Identities=22% Similarity=0.349 Sum_probs=131.9
Q ss_pred hcCCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCee-cCcCHHHHHHHHHHcCCcEEEEEEeCCCCCCcce
Q 022113 10 AKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVI-SEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGV 88 (302)
Q Consensus 10 ~~~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l-~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~ 88 (302)
++||+++.|+.|+++.||+++++.+++++.. ++++++.||.+ .+.++.++++.|.+...+.+++..+..+|.+||+
T Consensus 72 ~~~g~~i~~~~~~~~~G~~~al~~a~~~i~~---~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~dp~~~g~ 148 (295)
T 1lvw_A 72 SQFGVRFSYRVQEEPRGIADAFIVGKDFIGD---SKVALVLGDNVFYGHRFSEILRRAASLEDGAVIFGYYVRDPRPFGV 148 (295)
T ss_dssp GGGTSEEEEEECSSCCCGGGHHHHTHHHHTT---SCEEEEETTCCEECTTHHHHHHHHHTCCSSEEEEEEECSCCTTSEE
T ss_pred cccCceEEEeeCCCCCChHHHHHHHHHHhCC---CcEEEEECCccccCcCHHHHHHHHHHcCCCcEEEEEECCCcccCCE
Confidence 4589999999999999999999999999863 68888889984 4778999999998777778888888888889999
Q ss_pred EEEeCCCCcEEEEEecCCCCCCCeEEEEEEEeCHhhHhhccCCCCC----c-cccchHHHHhcCcEEEEEec-Ce-eEec
Q 022113 89 VVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTS----I-EKEVFPKIALEGKLFAMVLP-GF-WMDI 161 (302)
Q Consensus 89 v~~d~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~----~-~~~~~~~l~~~~~v~~~~~~-g~-~~di 161 (302)
+.+|+ ++++++|.|||..+.+++.++|+|+|++++++.+..-..+ + ..+++..+++.+++.++... ++ |.|+
T Consensus 149 v~~d~-~g~v~~~~ekp~~~~s~~~~~Giy~f~~~~l~~~~~~~~~~~ge~~~td~~~~~l~~g~~~v~~~~~g~~w~Di 227 (295)
T 1lvw_A 149 VEFDS-EGRVISIEEKPSRPKSNYVVPGLYFYDNQVVEIARRIEPSDRGELEITSVNEEYLRMGKLRVELMGRGMAWLDT 227 (295)
T ss_dssp EEECT-TSBEEEEEESCSSCSCSEECCSEEEECTTHHHHHHHCCCCTTSCCCHHHHHHHHHHTTCEEEEEECTTCEECCC
T ss_pred EEECC-CCcEEEEEECCCCCCCCEEEEEeEEEcHHHHHHHHhcCCcccCceeHHHHHHHHHHcCCcEEEEeCCCCeEEeC
Confidence 99986 7999999999976667899999999999998766321111 1 13445566777787777665 74 9999
Q ss_pred CChHHHHHHHHHHH
Q 022113 162 GQPRDYITGLRLYL 175 (302)
Q Consensus 162 gt~~~~~~a~~~~l 175 (302)
+||++|.++...+.
T Consensus 228 gt~edl~~a~~~~~ 241 (295)
T 1lvw_A 228 GTHDGLLEASSFIE 241 (295)
T ss_dssp SSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 99999999987653
No 17
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=99.80 E-value=3.4e-18 Score=146.55 Aligned_cols=153 Identities=32% Similarity=0.541 Sum_probs=126.9
Q ss_pred EEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCeecCcCHHHHHHHHHHcCCcEEEEEEeCCCCCCcceEEEeCCC
Q 022113 16 IICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVMEEST 95 (302)
Q Consensus 16 i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~v~~d~~~ 95 (302)
+.+..++.++||+++|+.|++++.. +++|++++||++++.++.++++.|.+.++++++... +++..||.+.++ +
T Consensus 97 v~~~~~~~~~gt~~al~~a~~~~~~--~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~t~~~~--~~~~~~g~v~~~--~ 170 (259)
T 1tzf_A 97 VTLVDTGDSSMTGGRLKRVAEYVKD--DEAFLFTYGDGVADLDIKATIDFHKAHGKKATLTAT--FPPGRFGALDIQ--A 170 (259)
T ss_dssp EEEEECCSSCCHHHHHHHTGGGTTT--SSCEEEEETTEEECCCHHHHHHHHHHHCCSEEEEEE--CCCCCSEEEEEE--T
T ss_pred eeeeecccccCcHHHHHHHHHhcCC--CCcEEEEECCEecccCHHHHHHHHHHhCCeEEEEEe--cCCCCccEEEEc--C
Confidence 4455667789999999999999842 378999999999999999999999887777776543 467789999887 6
Q ss_pred CcEEEEEecCCCCCCCeEEEEEEEeCHhhHhhccCCCCCccccchHHHHhcCcEEEEEecCeeEecCChHHHHHHHHHHH
Q 022113 96 GKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYL 175 (302)
Q Consensus 96 ~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~v~~~~~~g~~~digt~~~~~~a~~~~l 175 (302)
+++..|.|||... ..++++|+|+|++++|+.++.....+..+.++.+++++++.++..+++|.|++++++|.+++..+.
T Consensus 171 g~v~~~~ekp~~~-~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~dI~t~~d~~~a~~~~~ 249 (259)
T 1tzf_A 171 GQVRSFQEKPKGD-GAMINGGFFVLNPSVIDLIDNDATTWEQEPLMTLAQQGELMAFEHPGFWQPMDTLRDKVYLEGLWE 249 (259)
T ss_dssp TEEEEEEESCSCC-SCCEECCCEEECGGGGGGCCSTTCCTTTHHHHHHHHTTCEEEEEECSCEEECCSHHHHHHHHHHHH
T ss_pred CEEEEEEecCCCC-CceEEEEEEEeCHHHHHhhcccccccHHHHHHHHHHcCCEEEEEeCcEEEeCCCHHHHHHHHHHHh
Confidence 8999999999653 468999999999999988765444455677777787789999999999999999999999987664
No 18
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.77 E-value=4.5e-19 Score=150.45 Aligned_cols=124 Identities=19% Similarity=0.253 Sum_probs=97.7
Q ss_pred CeeEecCChHHHHHHHHHHHHhhccc---------------cccccccCceEecceEEcCCcEECCCCEECCCcEECCCC
Q 022113 156 GFWMDIGQPRDYITGLRLYLDSLRKK---------------SSLKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGC 220 (302)
Q Consensus 156 g~~~digt~~~~~~a~~~~l~~~~~~---------------~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~ 220 (302)
|+|.|+++ +++++..+++..... ..+.+.+++.|.+++.|++++.|++++.|+++++||++|
T Consensus 52 g~w~di~~---~l~~n~~~l~~~~~~~~~~~~~~~~~~~~~~~~~I~~~a~I~~~v~Ig~~~~I~~~s~I~~~~~IG~~~ 128 (240)
T 3r8y_A 52 GEWSEIKT---ILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGS 128 (240)
T ss_dssp EEHHHHHH---HHHHTTTTEEEEEEEECCBSBCSCBCCCTTCSSEECTTCEEBSSCEECTTCEECTTCEECTTCEECTTC
T ss_pred ccHHHHHH---HHHhccceechhhhhhhhhhhccchhhccCCCCEECCCCEECCCcEECCCCEECCCCEECCCCEECCCC
Confidence 34888877 666666554322211 125566777777788888888888888888888888888
Q ss_pred EECCCcEEe-ceEEccCCEECCCcEEec---------cEECCCCEECCCcEEccCcEECCCcEECCceEEcC
Q 022113 221 VVESGVRLS-RCTVMRGVRIKKHACISS---------SIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNG 282 (302)
Q Consensus 221 ~i~~~~~i~-~~~i~~~~~i~~~~~i~~---------~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~ 282 (302)
.|+.++.|. +++|+++|.|++++.+.+ ++|+++|+||.++.|.+++.||+++.|++++++..
T Consensus 129 ~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig~~~~IG~~~~I~~~~~Ig~~~~I~~gsvV~~ 200 (240)
T 3r8y_A 129 MIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTE 200 (240)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECCCCSCTTSCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred EECCCCEECCCCEECCCcEECCCcEECCCccCCCCCCcEECCCCEECCCCEECCCcEECCCCEECCCCEECC
Confidence 888888886 789999999999999976 89999999999999999999999999999988754
No 19
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=99.76 E-value=2.5e-18 Score=150.44 Aligned_cols=160 Identities=24% Similarity=0.318 Sum_probs=110.8
Q ss_pred CCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCeecC---cCHHHHHHHHHHcCCcEEEEEEeC--CCCCCc
Q 022113 12 LGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISE---YPFAEMIEFHKAHGGEASIMVTKV--DEPSKY 86 (302)
Q Consensus 12 ~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~~---~~l~~~~~~~~~~~~~~~l~~~~~--~~~~~~ 86 (302)
.|.++.|+.|+.++||+++++.|++++.. ++|+|++||++++ .++.++++.|++.+. .++++.+. +++..|
T Consensus 104 ~g~~i~~~~~~~~~Gt~~al~~a~~~~~~---~~~lv~~~D~~~~~~~~~l~~l~~~~~~~~~-~~i~~~~~~~~~~~~y 179 (297)
T 2ux8_A 104 KPGNIAYVRQQEPMGLGHAVWCARDIVGD---EPFAVLLPDDFMFGQPGCLKQMVDAYNKVGG-NLICAEEVPDDQTHRY 179 (297)
T ss_dssp STTSEEEEECCSCCCHHHHHHTTHHHHCS---SCEEEECTTEEEESSSCHHHHHHHHHHHHCS-EEEEEC----------
T ss_pred CCCceEEEeCCCCCChHHHHHHHHHHcCC---CcEEEEeCCeecCCChHHHHHHHHHHHhcCC-CEEEEEecCcccCCCC
Confidence 46788999998999999999999999853 7999999999876 569999999987665 56666554 466789
Q ss_pred ceEEEeC-CCC--cEEEEEecCC--CCCCCeEEEEEEEeCHhhHhhccCCCC-----CccccchHHHHhcCcEEEEEecC
Q 022113 87 GVVVMEE-STG--KVEKFVEKPK--LFVGNKINAGIYLLNPAVLDRIELRPT-----SIEKEVFPKIALEGKLFAMVLPG 156 (302)
Q Consensus 87 g~v~~d~-~~~--~v~~~~ekp~--~~~~~~~~~Giy~~~~~~l~~l~~~~~-----~~~~~~~~~l~~~~~v~~~~~~g 156 (302)
|++..++ +++ ++..|.|||. .....++++|+|+|++++|+.++.... ....+.++.+++++++.++.+++
T Consensus 180 g~v~~~~~~~~~~~v~~~~ekp~~~~~~~~~~~~Giyi~~~~~l~~l~~~~~~~~~~~~l~d~i~~l~~~~~v~~~~~~~ 259 (297)
T 2ux8_A 180 GIITPGTQDGVLTEVKGLVEKPAPGTAPSNLSVIGRYILQPEVMRILENQGKGAGGEIQLTDAMQRMIGDQPFHGVTFQG 259 (297)
T ss_dssp -CCCCCCBCSSEEEC--------------CCCEEEEEEECTHHHHHHHHTC--------CCTTGGGGTTTSCEEEEECSS
T ss_pred CeEEecccCCCceeEEEEEECCCCCCCCccEEEEEEEEECHHHHHHHHhhCCCCCCeeEHHHHHHHHHhcCCEEEEEecc
Confidence 9887652 244 8999999985 334578999999999999987753211 11245677777778999999999
Q ss_pred eeEecCChHHHHHHHHHHH
Q 022113 157 FWMDIGQPRDYITGLRLYL 175 (302)
Q Consensus 157 ~~~digt~~~~~~a~~~~l 175 (302)
+|.|++||++|.+++..++
T Consensus 260 ~w~dIgt~~dl~~a~~~~~ 278 (297)
T 2ux8_A 260 TRYDCGDKAGFIQANLAVA 278 (297)
T ss_dssp EEEETTSHHHHHHHHHHHH
T ss_pred eEEeCCCHHHHHHHHHHHH
Confidence 9999999999999986554
No 20
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.76 E-value=1.3e-17 Score=147.48 Aligned_cols=159 Identities=24% Similarity=0.339 Sum_probs=125.3
Q ss_pred CCcEEEEEecCCCCCChHHHHHcHhhhccCCCCc--EEEEeCCeecC--cCHHHHHHHHHHcCCcEEEEEEeCC--CCCC
Q 022113 12 LGIKIICSQETEPLGTAGPLALARDKLIDDTGEP--FFVLNSDVISE--YPFAEMIEFHKAHGGEASIMVTKVD--EPSK 85 (302)
Q Consensus 12 ~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~--~lv~~gD~l~~--~~l~~~~~~~~~~~~~~~l~~~~~~--~~~~ 85 (302)
+|.++.|+.|++++||+++++.|++++.. ++ |+|++||++++ .++.++++.|++.+. .++.+.+.+ ++..
T Consensus 103 ~g~~i~~~~~~~~~Gt~~al~~a~~~l~~---~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~~-~~i~~~~~~~~~~~~ 178 (323)
T 2pa4_A 103 DLIKAVPVTQDKPLGLGHAVGLAESVLDD---DEDVVAVMLPDDLVLPTGVMERMAQVRAEFGG-SVLCAVEVSEADVSK 178 (323)
T ss_dssp HHCEEEEEECSSCCCHHHHHHTTGGGSCS---SCCEEEEECTTEEEESSCHHHHHHHHHHTTCS-EEEEEEECCGGGGGG
T ss_pred cCcceEEEeCCccCCcHHHHHHHHHHhcC---CCCeEEEEeCCcccCchHHHHHHHHHHHhcCC-cEEEEEEecccccCC
Confidence 36788899998899999999999998853 44 99999999876 569999999987664 566666553 5678
Q ss_pred cceEEEe----CCCC--cEEEEEecCC--CCCCCeEEEEEEEeCHhhHhhccCCCCCc-----cccchHHHHhc-CcEEE
Q 022113 86 YGVVVME----ESTG--KVEKFVEKPK--LFVGNKINAGIYLLNPAVLDRIELRPTSI-----EKEVFPKIALE-GKLFA 151 (302)
Q Consensus 86 ~g~v~~d----~~~~--~v~~~~ekp~--~~~~~~~~~Giy~~~~~~l~~l~~~~~~~-----~~~~~~~l~~~-~~v~~ 151 (302)
||++.++ + ++ ++..|.|||. .....+.++|+|+|++++|+.++....+. ..+.++.++++ .++.+
T Consensus 179 yg~v~~d~~~~~-~~~~~V~~~~Ekp~~~~~~~~~~~~GiY~~~~~~~~~l~~~~~~~~ge~~l~d~i~~l~~~g~~v~~ 257 (323)
T 2pa4_A 179 YGIFEIEADTKD-SDVKKVKGMVEKPAIEDAPSRLAATGRYLLDRKIFDALRRITPGAGGELQLTDAIDLLIDEGHPVHI 257 (323)
T ss_dssp SEEEEEEECCSS-TTEEEEEEEEESCCTTTCSCSEEEEEEEEEETHHHHHHHHCCCCGGGCCCHHHHHHHHHHTTCCEEE
T ss_pred ccEEEeCCcccC-CCceeEEEEEECCCCccccccEEEEEEEEECHHHHHHHHhhCCCCCCeEeHHHHHHHHHHcCCCEEE
Confidence 9999876 4 44 9999999995 33467899999999999998875322211 14556667766 78999
Q ss_pred EEecCeeEecCChHHHHHHHHHHH
Q 022113 152 MVLPGFWMDIGQPRDYITGLRLYL 175 (302)
Q Consensus 152 ~~~~g~~~digt~~~~~~a~~~~l 175 (302)
+.++++|.|++||++|.+++..++
T Consensus 258 ~~~~g~w~DIgt~~dl~~a~~~~~ 281 (323)
T 2pa4_A 258 VIHQGKRHDLGNPGGYIPACVDFG 281 (323)
T ss_dssp EECCSEEEECSSHHHHHHHHHHHH
T ss_pred EEeCCeEEeCCCHHHHHHHHHHHh
Confidence 999999999999999999985443
No 21
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=99.76 E-value=1.2e-17 Score=142.85 Aligned_cols=161 Identities=22% Similarity=0.340 Sum_probs=117.7
Q ss_pred hHHHHHhhcCCcE--EEEEecCCCCCChHHHHHcHhhhcc---CCCCcEEEEeCCeec-CcCHHHHHHHHHHcCCcEEEE
Q 022113 3 NFLKEFEAKLGIK--IICSQETEPLGTAGPLALARDKLID---DTGEPFFVLNSDVIS-EYPFAEMIEFHKAHGGEASIM 76 (302)
Q Consensus 3 ~~~~~~~~~~g~~--i~~~~~~~~~Gt~~al~~a~~~i~~---~~~~~~lv~~gD~l~-~~~l~~~~~~~~~~~~~~~l~ 76 (302)
+++.+.-++++.+ ..++.|++++||++|+++|++++.. +.+++|+|++||+++ +.++.++ .+.++.+++
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~av~~a~~~l~~~~~~~~~~~lV~~gD~l~~~~~~~~~-----~~~~~~~i~ 135 (255)
T 4evw_A 61 VFVREKATQLGIKQFYIAELHTETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPNFVFPDI-----SQHSDGYLE 135 (255)
T ss_dssp HHHHHHHHHHTCSSEEEEEESSCCSSHHHHHHHHHHHHHHTTCCCCSCEEECCTTEECTTCCCCGG-----GGSSSEEEE
T ss_pred HHHHHHHHHcCCCCceEEEeCCCCCCHHHHHHHHHHHHhhcccCCCCcEEEEeCCEEEecchhHHH-----hhcCCcEEE
Confidence 3444433334432 3567788999999999999999820 114789999999988 5666553 245678889
Q ss_pred EEeCCCCCCcceEEEeCCCC--cEEEEEecCCCCCCCeEEEEEEEeCHh-hH-h----hccC------CCCCccccchHH
Q 022113 77 VTKVDEPSKYGVVVMEESTG--KVEKFVEKPKLFVGNKINAGIYLLNPA-VL-D----RIEL------RPTSIEKEVFPK 142 (302)
Q Consensus 77 ~~~~~~~~~~g~v~~d~~~~--~v~~~~ekp~~~~~~~~~~Giy~~~~~-~l-~----~l~~------~~~~~~~~~~~~ 142 (302)
+.+.++| .||++..|+ +| +|++|.||+. .++++++|+|+|++. .| + .+.. .......++++.
T Consensus 136 ~~~~~~p-~yG~v~~d~-~g~~~V~~i~EK~~--~s~~~~~GiY~f~~~~~~~~~l~~~i~~~~~~~~~gE~~ltd~i~~ 211 (255)
T 4evw_A 136 VFQGGGD-NWSFAKPEH-AGSTKVIQTAEKNP--ISDLCSTGLYHFNRKEDYLEAYREYVARPSQEWERGELYIAPLYNE 211 (255)
T ss_dssp EEECCSS-CSCEEEESS-TTCCBEEEEESSSC--SSSEEEEEEEEESCHHHHHHHHHHHHTSCGGGCSCSCCCSTTHHHH
T ss_pred EEecCCC-ceeEEEECC-CCCeEEEEEEeccC--ccCcEEEeEEEECcHHHHHHHHHHHHhcccccccCCeEehHHHHHH
Confidence 9888776 999999986 67 9999999953 468999999999985 22 2 2221 112223566777
Q ss_pred HHhcC-cEEEEEec-CeeEecCChHHHHHHHH
Q 022113 143 IALEG-KLFAMVLP-GFWMDIGQPRDYITGLR 172 (302)
Q Consensus 143 l~~~~-~v~~~~~~-g~~~digt~~~~~~a~~ 172 (302)
+++++ ++.++.++ ++|+|+|+|++|.++..
T Consensus 212 li~~g~~v~~~~~~~~~w~digt~~~l~~~~~ 243 (255)
T 4evw_A 212 LIQKGLNIHYHLIARHEVIFCGVPDEYTDFLR 243 (255)
T ss_dssp HHHTTCCEEEEECCGGGCEECCSHHHHHHHHH
T ss_pred HHHCCCEEEEEEeccccEEECCCHHHHHHHHh
Confidence 77665 68888885 99999999999988864
No 22
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.72 E-value=1.2e-16 Score=128.74 Aligned_cols=108 Identities=19% Similarity=0.213 Sum_probs=94.2
Q ss_pred ccccccCceEecceEEcCCcEECCCCEECCC---cEECCCCEECCCcEEe-----ceEEccCCEECCCcEEeccEECCCC
Q 022113 183 SLKLATGANIVGNVLVHESAQIGEGCLIGPD---VAVGPGCVVESGVRLS-----RCTVMRGVRIKKHACISSSIIGWHS 254 (302)
Q Consensus 183 ~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~---~~ig~~~~i~~~~~i~-----~~~i~~~~~i~~~~~i~~~~i~~~~ 254 (302)
.+.+.+++.+.+++.|++++.|+++|.|.++ ++||++|.|++++.|. +++|+++|.|++++.+.+++|++++
T Consensus 18 ~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~ 97 (173)
T 1xhd_A 18 SAFIADYVTITGDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVILHSCHIKKDA 97 (173)
T ss_dssp TCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEEESCEECTTC
T ss_pred CcEECCCCEEECCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEEeCCEECCCC
Confidence 4556777777778888888888888888765 7999999999999998 7999999999999999999999999
Q ss_pred EECCCcEEccCcEECCCcEECCceEEcCCeEecCcc
Q 022113 255 TVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKE 290 (302)
Q Consensus 255 ~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~~~~~ 290 (302)
+|++++.|.+++.||+++.|++++++.++..+|+..
T Consensus 98 ~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~~~~~i~~~~ 133 (173)
T 1xhd_A 98 LIGMGSIILDGAEIGEGAFIGAGSLVSQGKKIPPNT 133 (173)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTTE
T ss_pred EEcCCCEEcCCCEECCCCEECCCCEECCCcEeCCCC
Confidence 999999999999999999999999887766665544
No 23
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.71 E-value=1.7e-16 Score=130.11 Aligned_cols=111 Identities=14% Similarity=0.124 Sum_probs=88.3
Q ss_pred ccccccccCceEecceEEcCCcEECCCCEEC---CCcEECCCCEECCCcEEe-----------------ceEEccCCEEC
Q 022113 181 KSSLKLATGANIVGNVLVHESAQIGEGCLIG---PDVAVGPGCVVESGVRLS-----------------RCTVMRGVRIK 240 (302)
Q Consensus 181 ~~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~---~~~~ig~~~~i~~~~~i~-----------------~~~i~~~~~i~ 240 (302)
...+.+.+++.|.+++.||+++.|+++|.|. .++.||++|.|++++.|. ++.|++++.|+
T Consensus 16 ~~~a~I~~~a~I~g~V~IG~~~~I~~~~~I~~~~g~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~ 95 (194)
T 3tv0_A 16 APGAVVCVESEIRGDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINAYPDNITPDTEDPEPKPMIIGTNNVFE 95 (194)
T ss_dssp CTTCEECTTSEEESSEEECTTCEECTTCEEEESSSCEEECTTCEECTTCEEEECCCSCC---------CCEEECSSCEEC
T ss_pred CCCCEEcCCCEEeCCCEECCCCEECCCCEEccCCCCeEECCCccccCCcccccccccccccccccCcCCceEECCcceEe
Confidence 3445555555666666666666666666663 245888999999999884 46899999999
Q ss_pred CCcEEeccEECCCCEECCCcEEccCcEECCCcEECCceEEcCCeEecCccc
Q 022113 241 KHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEI 291 (302)
Q Consensus 241 ~~~~i~~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~~~~~~ 291 (302)
.++.+.++.|+++++|+++++|++++.||++|.|+++++|.+++.+|+..+
T Consensus 96 ~~~~i~~~~Ig~~~~Ig~~~~I~~gv~IG~~~~IgagsvV~~~~~Ip~~sv 146 (194)
T 3tv0_A 96 VGCYSQAMKMGDNNVIESKAYVGRNVILTSGCIIGACCNLNTFEVIPENTV 146 (194)
T ss_dssp TTCEECCSEECSSCEECTTCEECTTEEECSSCEECTTCEECCCEEECTTEE
T ss_pred cceeEeeeeecccceecceeeECCeEEECCCCEECCCCEECCCcEECCCCE
Confidence 999999999999999999999999999999999999999888877776654
No 24
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.71 E-value=1.2e-16 Score=130.78 Aligned_cols=108 Identities=19% Similarity=0.278 Sum_probs=90.4
Q ss_pred cccccCceEecceEEcCCcEECCCCEECC---CcEECCCCEECCCcEEe------ceEEccCCEECCCcEEeccEECCCC
Q 022113 184 LKLATGANIVGNVLVHESAQIGEGCLIGP---DVAVGPGCVVESGVRLS------RCTVMRGVRIKKHACISSSIIGWHS 254 (302)
Q Consensus 184 ~~~~~~~~i~~~~~i~~~~~i~~~~~i~~---~~~ig~~~~i~~~~~i~------~~~i~~~~~i~~~~~i~~~~i~~~~ 254 (302)
+.+.+++.|.+++.|++++.|+++|.|.+ .++||++|.|++++.|. +++|+++|.|++++.+.+++|+++|
T Consensus 40 ~~I~~~~~i~~~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~~~i~~~~Ig~~~ 119 (191)
T 3ixc_A 40 AFIAGNARIIGDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHSCILHACTLGNNA 119 (191)
T ss_dssp SEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTTCEECTTCEECSCEECTTC
T ss_pred CEECCCCEEeCCcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCCCEECCCCEEECCEECCCC
Confidence 44555666666666777777777776653 33789999999999998 8999999999999999999999999
Q ss_pred EECCCcEEccCcEECCCcEECCceEEcCCeEecCccc
Q 022113 255 TVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEI 291 (302)
Q Consensus 255 ~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~~~~~~ 291 (302)
+|++++.|.+++.||+++.|++++++.++..+|+..+
T Consensus 120 ~Ig~~~~I~~~~~Ig~~~~Ig~gsvV~~~~~i~~~~~ 156 (191)
T 3ixc_A 120 FVGMGSIVMDRAVMEEGSMLAAGSLLTRGKIVKSGEL 156 (191)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTTEE
T ss_pred EECCCCEEeCCeEECCCCEECCCCEECCCcCcCCCeE
Confidence 9999999999999999999999999988777776654
No 25
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.71 E-value=1.1e-16 Score=130.50 Aligned_cols=109 Identities=19% Similarity=0.231 Sum_probs=93.7
Q ss_pred ccccccCceEecceEEcCCcEECCCCEECCCc---EECCCCEECCCcEE------------eceEEccCCEECCCcEEec
Q 022113 183 SLKLATGANIVGNVLVHESAQIGEGCLIGPDV---AVGPGCVVESGVRL------------SRCTVMRGVRIKKHACISS 247 (302)
Q Consensus 183 ~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~---~ig~~~~i~~~~~i------------~~~~i~~~~~i~~~~~i~~ 247 (302)
...+++++.+.+++.|++++.|++++.|.+++ .||++|.|++++.| .+++|+++|.|++++.|.+
T Consensus 21 ~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~ 100 (187)
T 3r3r_A 21 RVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDVTVGHKVMLHG 100 (187)
T ss_dssp TCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCBTTBC-CBCEEECSSCEECTTCEEES
T ss_pred CeEECCCCEEECceEECCCCEECCCcEEEcCCccEEECCCCEECCCCEEecCCccccCCCCCCeEECCCCEECCCCEEeC
Confidence 34566677777777777888888888777654 99999999999999 5799999999999999999
Q ss_pred cEECCCCEECCCcEEccCcEECCCcEECCceEEcCCeEecCccc
Q 022113 248 SIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEI 291 (302)
Q Consensus 248 ~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~~~~~~ 291 (302)
++||++++||+++.|.+++.||+++.|++++++.++..+|+..+
T Consensus 101 ~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~~s~V~~~~~i~~~~v 144 (187)
T 3r3r_A 101 CTIGNRVLVGMGSIVLDGAIIEDDVMIGAGSLVPQHKRLESGYL 144 (187)
T ss_dssp CEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEECTTEE
T ss_pred cEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcCcCCCcE
Confidence 99999999999999999999999999999999887777666554
No 26
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.70 E-value=1.5e-16 Score=127.99 Aligned_cols=108 Identities=17% Similarity=0.225 Sum_probs=94.2
Q ss_pred ccccccCceEecceEEcCCcEECCCCEECCC---cEECCCCEECCCcEEe-----ceEEccCCEECCCcEEeccEECCCC
Q 022113 183 SLKLATGANIVGNVLVHESAQIGEGCLIGPD---VAVGPGCVVESGVRLS-----RCTVMRGVRIKKHACISSSIIGWHS 254 (302)
Q Consensus 183 ~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~---~~ig~~~~i~~~~~i~-----~~~i~~~~~i~~~~~i~~~~i~~~~ 254 (302)
.+.+++++.+.+++.+++++.|++++.|.++ ++||++|.|++++.|. +++|+++|.|++++.|.+++|++++
T Consensus 16 ~~~I~~~a~i~g~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~~~Ig~~~ 95 (173)
T 1v3w_A 16 SAFVDENAVVIGDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVHGAKVGNYV 95 (173)
T ss_dssp TCEECTTSEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEESCEECSSE
T ss_pred CCEECCCCEEeCCEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEECCCEECCCC
Confidence 4567777788888888888888888888764 8999999999999998 5899999999999999999999999
Q ss_pred EECCCcEEccCcEECCCcEECCceEEcCCeEecCcc
Q 022113 255 TVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKE 290 (302)
Q Consensus 255 ~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~~~~~ 290 (302)
+|++++.|.+++.||+++.|++++++.++..+|+..
T Consensus 96 ~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~~~~~i~~~~ 131 (173)
T 1v3w_A 96 IIGISSVILDGAKIGDHVIIGAGAVVPPNKEIPDYS 131 (173)
T ss_dssp EECTTCEECTTCEECSSEEECTTCEECTTCEECTTE
T ss_pred EECCCCEEeCCCEECCCCEECCCCEECCCcEeCCCc
Confidence 999999999999999999999998887666555543
No 27
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=99.70 E-value=5.1e-17 Score=142.85 Aligned_cols=158 Identities=18% Similarity=0.261 Sum_probs=111.1
Q ss_pred CCc-EEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCeec-CcC-HHHHHHH---HHHcCCcEEEEEEeCCCCCC
Q 022113 12 LGI-KIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVIS-EYP-FAEMIEF---HKAHGGEASIMVTKVDEPSK 85 (302)
Q Consensus 12 ~g~-~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~-~~~-l~~~~~~---~~~~~~~~~l~~~~~~~~~~ 85 (302)
||+ ++.|+.|+.++||+++++.+++++.. ++.|++++||+++ +.+ +.++++. |.++++++|+++.+.+++..
T Consensus 74 ~~~~~~~~i~~~~~~gt~~al~~a~~~l~~--~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~ 151 (308)
T 2qh5_A 74 IKNKSVGFLLESLSKNTANAIALSALMSDK--EDLLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFLVTFGVSIDKPNTE 151 (308)
T ss_dssp CSSCEEEEEEESSCCCHHHHHHHHHHTSCT--TSEEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCEEEEEEECSSCCTT
T ss_pred hCCCccEEEeCCCCCChHHHHHHHHHHhCC--CCeEEEEcCCccccCHHHHHHHHHHHHHHHhcCCEEEEEEecCCCCCC
Confidence 676 78899999999999999999998842 2459999999987 677 9999887 76777788888888877788
Q ss_pred cceEEEeCCCCcEEEEEecCCCCC--------CCeEEEEEEEeCHhhH-hhccCC-----------------C----CCc
Q 022113 86 YGVVVMEESTGKVEKFVEKPKLFV--------GNKINAGIYLLNPAVL-DRIELR-----------------P----TSI 135 (302)
Q Consensus 86 ~g~v~~d~~~~~v~~~~ekp~~~~--------~~~~~~Giy~~~~~~l-~~l~~~-----------------~----~~~ 135 (302)
||++..++ +++|+.|.|||.... ..++++|+|+|++++| +.++.. . ..+
T Consensus 152 ~g~i~~d~-~~~V~~~~Ekp~~~~~~~~~~~g~~~~n~Giy~~~~~~ll~~l~~~~p~~~~~~~~~~~~~~~~~~~e~~~ 230 (308)
T 2qh5_A 152 FGYIESPN-GLDVKRFIEKPSLDKAIEFQKSGGFYFNSGMFVFQAGVFLDELKKHAPTILKGCERAFESLENAYFFEKKI 230 (308)
T ss_dssp SEEEECSS-SSBCSEEEESCCHHHHHHHHHHCCEEEEEEEEEEEHHHHHHHHHHHCHHHHHHHHHHGGGCEEECCSSSCE
T ss_pred ceEEEECC-CCEEEEEEECCChHHHHHHhhcCCeEEEeEEEEEEHHHHHHHHHHhChHHHHHHHHHhhccccccccchhh
Confidence 99998874 689999999996421 4689999999999775 333210 0 111
Q ss_pred ---cccchH---------HHHhc-CcEEEEEecCeeEecCChHHHHHHHH
Q 022113 136 ---EKEVFP---------KIALE-GKLFAMVLPGFWMDIGQPRDYITGLR 172 (302)
Q Consensus 136 ---~~~~~~---------~l~~~-~~v~~~~~~g~~~digt~~~~~~a~~ 172 (302)
..+.|+ .++++ .++.++.++++|.|+|+|++|.+++.
T Consensus 231 ~~~~~~~~~~~~~~sid~~lle~~~~v~~~~~~~~w~digt~~~l~~~~~ 280 (308)
T 2qh5_A 231 ARLSEKSMQDLEDMSIDIALMQQSHKIKMVELNAKWSDLGNFNALFEEAA 280 (308)
T ss_dssp EEECHHHHHTSCCCCHHHHTTTTCSCEEEEECCSCCBC------------
T ss_pred hhhhHHHHhhCcccceeHHHhcCCCcEEEEECCCceeCCCCHHHHHHHhh
Confidence 123333 13444 68999999999999999999988864
No 28
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.69 E-value=3.2e-16 Score=127.88 Aligned_cols=107 Identities=20% Similarity=0.252 Sum_probs=89.3
Q ss_pred cccccCceEecceEEcCCcEECCCCEECCC---cEECCCCEECCCcEEece------------EEccCCEECCCcEEecc
Q 022113 184 LKLATGANIVGNVLVHESAQIGEGCLIGPD---VAVGPGCVVESGVRLSRC------------TVMRGVRIKKHACISSS 248 (302)
Q Consensus 184 ~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~---~~ig~~~~i~~~~~i~~~------------~i~~~~~i~~~~~i~~~ 248 (302)
+.+.+++.+.+++.||+++.|+++|.|.++ +.||++|.|++++.|..+ .|+++|.|++++.|.++
T Consensus 26 ~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~ 105 (189)
T 3r1w_A 26 VFVDRSSVIIGDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDDVTIGHQAMLHGC 105 (189)
T ss_dssp CEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEECSSEEECTTCEEESC
T ss_pred cEECCCCEEeeeeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEECCCCEECCCCEEeCc
Confidence 445666666677777777777777777633 488999999999999754 99999999999999999
Q ss_pred EECCCCEECCCcEEccCcEECCCcEECCceEEcCCeEecCcc
Q 022113 249 IIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKE 290 (302)
Q Consensus 249 ~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~~~~~ 290 (302)
+||++|+|++++.|.+++.||+++.|++++++.++..+|+..
T Consensus 106 ~Ig~~~~Ig~~~~i~~~v~Ig~~~~Ig~~s~V~~g~~i~~~~ 147 (189)
T 3r1w_A 106 TIGNRVLIGMKSMIMDGAIVEDEVIVAAGATVSPGKVLESGF 147 (189)
T ss_dssp EECSSEEECTTCEECTTCEECSSCEECTTCEECTTCEECTTE
T ss_pred EECCCcEECCCCEEcCCCEECCCCEEccCCEECCCCEeCCCC
Confidence 999999999999999999999999999999888776666554
No 29
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.67 E-value=2.8e-15 Score=122.81 Aligned_cols=125 Identities=14% Similarity=0.080 Sum_probs=87.9
Q ss_pred eEecCChHHHHHHHHHHHHhhccccccccccCceEecceEEc--CCcEECCCCEECCCcEECCCCEECCCcEEe-ceEEc
Q 022113 158 WMDIGQPRDYITGLRLYLDSLRKKSSLKLATGANIVGNVLVH--ESAQIGEGCLIGPDVAVGPGCVVESGVRLS-RCTVM 234 (302)
Q Consensus 158 ~~digt~~~~~~a~~~~l~~~~~~~~~~~~~~~~i~~~~~i~--~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~ 234 (302)
..-++++....+..+.+++. .......+++++.+.+++.++ +++.|+++++|++++.||++|.|++++.|. ++.|+
T Consensus 51 ~iaig~~~~r~~~~~~l~~~-~~~~~~~i~~~a~i~~~~~Ig~~~g~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~Ig 129 (194)
T 3bfp_A 51 FIAIGNNEIRKKIYQKISEN-GFKIVNLIHKSALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIEHECVIG 129 (194)
T ss_dssp EECCCCHHHHHHHHHHHHTT-TCCBCCEECTTCEECTTCEECTTSCCEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred EEEeCCHHHHHHHHHHHHHc-CCccccccCCeEEECCCceeCCCCCcEEcCCCEECCCCEECCCCEECCCCEEcCCCEEC
Confidence 45677776555544433221 122235567777777777777 777777777777777888888888887776 67788
Q ss_pred cCCEECCCcEEec-cEECCCCEECCCcEEccCcEECCCcEECCceEEcCC
Q 022113 235 RGVRIKKHACISS-SIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGG 283 (302)
Q Consensus 235 ~~~~i~~~~~i~~-~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~ 283 (302)
++|.|++++.|.+ ++|+++++|++++.|.+++.||+++.|++++++..+
T Consensus 130 ~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Igagsvv~~~ 179 (194)
T 3bfp_A 130 EFSHVSVGAKCAGNVKIGKNCFLGINSCVLPNLSLADDSILGGGATLVKN 179 (194)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSC
T ss_pred CCCEECCCCEECCCcEECCCCEEcCCCEECCCCEECCCCEECCCCEEccc
Confidence 8888888888855 778888888888877777777777777777776543
No 30
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.67 E-value=1.4e-16 Score=131.76 Aligned_cols=101 Identities=15% Similarity=0.227 Sum_probs=88.3
Q ss_pred ccccccCceEec--ceEEcCCcEECCCCEECCCcEECCCCEECCCcEEe----ceEEccCCEECCCcEE-----------
Q 022113 183 SLKLATGANIVG--NVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLS----RCTVMRGVRIKKHACI----------- 245 (302)
Q Consensus 183 ~~~~~~~~~i~~--~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~----~~~i~~~~~i~~~~~i----------- 245 (302)
...+.+++.|.+ ++.|++++.|+++|.|.++++||++|.|++++.|. +++|+++|.|++++.|
T Consensus 38 ~~~I~~~~~i~~~~~v~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~ 117 (205)
T 3vbi_A 38 NVLISKKASIYNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIVYAAIDDFSGNA 117 (205)
T ss_dssp SEEEBTTSEEESGGGEEECSSEEECTTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEEESEECCCSSSS
T ss_pred CCEECCCeEEccCCeeEECCCCEECCCCEEccceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEEEeCCCCccccc
Confidence 355677777776 78888889999999998899999999999999994 4999999999999999
Q ss_pred ---------------eccEECCCCEECCCcEEccCcEECCCcEECCceEEcCC
Q 022113 246 ---------------SSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGG 283 (302)
Q Consensus 246 ---------------~~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~ 283 (302)
++++||++|+||+++.|.+++.||++|.|+++++|..+
T Consensus 118 ~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~Ig~~~~Ig~gsvV~~~ 170 (205)
T 3vbi_A 118 LMGPTIPNQYKNVKTGKVILKKHVIIGAHSIIFPNVVIGEGVAVGAMSMVKES 170 (205)
T ss_dssp CCSTTSCGGGCCCEECCEEECTTCEECTTCEECSSCEECTTCEECTTCEECSC
T ss_pred ccCcccccccceeccCCEEECCCCEECCCCEEcCCCEECCCCEEcCCCEECCc
Confidence 45899999999999999999999999999999987644
No 31
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=99.66 E-value=3.4e-15 Score=124.77 Aligned_cols=124 Identities=18% Similarity=0.164 Sum_probs=96.5
Q ss_pred eEecCChHHHHHHHHHHHHhhccccccccccCceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcEEe-ceEEccC
Q 022113 158 WMDIGQPRDYITGLRLYLDSLRKKSSLKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLS-RCTVMRG 236 (302)
Q Consensus 158 ~~digt~~~~~~a~~~~l~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~ 236 (302)
+.-+++++...+..+.+.. ..-.....+++.+.+.+.+.+++++.|+++++|++++.||++|.|+.++.|. ++.|+++
T Consensus 75 ~iAIg~~~~R~~i~~~l~~-~g~~~~~~i~~~a~i~~~v~IG~g~~I~~~~~i~~~~~IG~~~~I~~~~~I~~~~~Ig~~ 153 (220)
T 4ea9_A 75 FVAIGDNRLRQKLGRKARD-HGFSLVNAIHPSAVVSPSVRLGEGVAVMAGVAINADSWIGDLAIINTGAVVDHDCRLGAA 153 (220)
T ss_dssp EECCCCHHHHHHHHHHHHH-TTCEECCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred EEecCCHHHHHHHHHHHHh-cCCCcCCcCCCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCCEECCCCEECCC
Confidence 3456665554444433322 2222345577888888888888888888888888888888889998888887 6889999
Q ss_pred CEECCCcEEec-cEECCCCEECCCcEEccCcEECCCcEECCceEEcC
Q 022113 237 VRIKKHACISS-SIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNG 282 (302)
Q Consensus 237 ~~i~~~~~i~~-~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~ 282 (302)
|.|++++.+.+ ++|+++|+||+++.|.+++.||+++.|++++++..
T Consensus 154 ~~i~~~~~i~~~v~Ig~~~~Ig~~~~i~~~~~Ig~~~~igagsvv~~ 200 (220)
T 4ea9_A 154 CHLGPASALAGGVSVGERAFLGVGARVIPGVTIGADTIVGAGGVVVR 200 (220)
T ss_dssp CEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CEECCCCEEcCCCEECCCCEECCCCEEcCCcEECCCCEECCCCEEcc
Confidence 99999998865 89999999999999988999999999999888754
No 32
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.66 E-value=1.2e-15 Score=130.27 Aligned_cols=165 Identities=13% Similarity=0.113 Sum_probs=124.8
Q ss_pred hcCCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCe-e-cCcCHHHHHHHHHHcCCcEEEEEEeCCCCCCc-
Q 022113 10 AKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDV-I-SEYPFAEMIEFHKAHGGEASIMVTKVDEPSKY- 86 (302)
Q Consensus 10 ~~~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~-l-~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~- 86 (302)
..+|+++.|..|+.++||++ +..++..+.....+.|++++||. + .+.++.++++.|.++++++++++.+.+++..|
T Consensus 59 ~~~g~~v~~~~~~~~~Gt~~-~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~v~~~~~~~ 137 (252)
T 3oam_A 59 QAFGGVVCMTSPNHQSGTER-LAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIEDEAEVF 137 (252)
T ss_dssp HHTTCEEEECCTTCCSHHHH-HHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEEECCHHHHT
T ss_pred HHcCCEEEEcCCCCCCcHHH-HHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeeecCCHHHhh
Confidence 34799999888888999999 55666666311137899999998 4 46679999999988888899999998888777
Q ss_pred ----ceEEEeCCCCcEEEEEecCCC-------------CCCCeEEEEEEEeCHhhHhhccCCCCC-cc-c---cchHHHH
Q 022113 87 ----GVVVMEESTGKVEKFVEKPKL-------------FVGNKINAGIYLLNPAVLDRIELRPTS-IE-K---EVFPKIA 144 (302)
Q Consensus 87 ----g~v~~d~~~~~v~~~~ekp~~-------------~~~~~~~~Giy~~~~~~l~~l~~~~~~-~~-~---~~~~~l~ 144 (302)
|.+.+|+ +|+++.|.++|-. +...+.++|+|+|++++|+.+.....+ +. . +.+..+.
T Consensus 138 ~p~~g~vv~d~-~g~v~~fsr~~i~~~~~~~~~~~~~~~~~~~~n~GiY~~~~~~l~~~~~~~~~~~e~~E~le~lr~l~ 216 (252)
T 3oam_A 138 NPNAVKVITDK-SGYALYFSRATIPWDRDNFAKADKAIVQPLLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLW 216 (252)
T ss_dssp CTTSCEEEECT-TSBEEEEESSCSSCCHHHHHSSSCCCCSCEEEEEEEEEEETTHHHHHHHSCCCHHHHHHTCTTHHHHH
T ss_pred CCCceEEEECC-CCeEEEEeCCCCCCCCCccccccccccccceEEEEEEEcCHHHHHHHHcCCCCcccccchhHHHHHHH
Confidence 8899986 7999999988632 225689999999999999877433222 11 1 2233344
Q ss_pred hcCcEEEEEec-CeeEecCChHHHHHHHHHHHH
Q 022113 145 LEGKLFAMVLP-GFWMDIGQPRDYITGLRLYLD 176 (302)
Q Consensus 145 ~~~~v~~~~~~-g~~~digt~~~~~~a~~~~l~ 176 (302)
+..++.++..+ .+|.|+++|+++.++++.+..
T Consensus 217 ~G~~i~~~~~~~~~~~~idt~~dl~~a~~~~~~ 249 (252)
T 3oam_A 217 HGEKIHVAVALEAPPAGVDTPEDLEVVRRIVAE 249 (252)
T ss_dssp TTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHH
T ss_pred CCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHh
Confidence 45688887664 478999999999999876643
No 33
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.63 E-value=4.6e-15 Score=121.33 Aligned_cols=46 Identities=20% Similarity=0.216 Sum_probs=32.3
Q ss_pred ccEECCCCEECCCcEEccCcEECCCcEECCceEEc----CCeE---ecCcccc
Q 022113 247 SSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSN----GGVV---LPHKEIK 292 (302)
Q Consensus 247 ~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~----~~~v---~~~~~~~ 292 (302)
+++|+++++||+++.|.+++.||+++.|++++++. ++++ .|+|.++
T Consensus 102 ~~~Ig~~v~IG~~~~I~~g~~Ig~~~~IgagsvV~~~vp~~~v~~G~PAk~i~ 154 (192)
T 3mqg_A 102 DTIVRQGATLGANCTVVCGATIGRYAFVGAGAVVNKDVPDFALVVGVPARQIG 154 (192)
T ss_dssp CEEECTTCEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEEETTTTEEEE
T ss_pred CcEECCCcEECCCCEECCCCEECCCCEEcCCCEECcccCCCCEEEccCCEEEE
Confidence 35777788888888888888888888888887754 3333 3566554
No 34
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.63 E-value=4e-15 Score=121.71 Aligned_cols=76 Identities=13% Similarity=0.182 Sum_probs=55.0
Q ss_pred cccccCceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcEEec-eEEccCCEECCCcEE-eccEECCCCEECCC
Q 022113 184 LKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSR-CTVMRGVRIKKHACI-SSSIIGWHSTVGQW 259 (302)
Q Consensus 184 ~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~~-~~i~~~~~i~~~~~i-~~~~i~~~~~i~~~ 259 (302)
+.+++++.|.+++.|++++.|++++.|++++.||++|.|++++.|.+ +.|+++|.|++++.| .++.|++++.|+++
T Consensus 4 ~~I~p~a~I~~~~~Ig~~~~I~~~~~I~~~~~IG~~~~Ig~~~~I~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~ig~~ 81 (192)
T 3mqg_A 4 ATIHPTAIVDEGARIGAHSRIWHWVHICGGAEIGEGCSLGQNVFVGNRVRIGNRVKIQNNVSVYDNVFLEDDVFCGPS 81 (192)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSSCEECTTCEECTTEEECTTCEECTT
T ss_pred CEECCCcEECCCCEECCCCEECCCCEECCCcEECCCCEECCCEEECCceEECCCcEEcCCcEEeCCCEECCCCEECCc
Confidence 45677777777777777777777777777777777777777777764 777777777777777 34667777655443
No 35
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.63 E-value=6.5e-15 Score=122.47 Aligned_cols=98 Identities=20% Similarity=0.272 Sum_probs=84.8
Q ss_pred cccccccCceEecceEEcCCcEECCCCEECC----CcEECCCCEECCCcEEec---------------eEEccCCEECCC
Q 022113 182 SSLKLATGANIVGNVLVHESAQIGEGCLIGP----DVAVGPGCVVESGVRLSR---------------CTVMRGVRIKKH 242 (302)
Q Consensus 182 ~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~----~~~ig~~~~i~~~~~i~~---------------~~i~~~~~i~~~ 242 (302)
..+.+.+++.+.+++.|++++.|+++|.|.. .++||++|.|+++|.|.. +.|+++|.|+++
T Consensus 44 ~~~~I~~~a~i~~~v~IG~~~~I~~~~~I~~~~~~~v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~~~~~~IG~~v~Ig~~ 123 (213)
T 3kwd_A 44 PTAYVHSFSNLIGDVRIKDYVHIAPGTSIRADEGTPFHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIGDNVSITHM 123 (213)
T ss_dssp TTCEECTTSEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECSSCCEECTTSCEESEEECTTCEECTT
T ss_pred CCCEECCCCEEeCceEECCCCEEcCCcEEecCCCCceEECCCCEECCCCEEEecCCCceeccCCcccceEECCCcEECCC
Confidence 3466777788888888888888888888853 589999999999999974 889999999999
Q ss_pred cEEec-cEECCCCEECCCcEEccCcEECCCcEECCceEE
Q 022113 243 ACISS-SIIGWHSTVGQWARVENMTILGEDVHVCDEIYS 280 (302)
Q Consensus 243 ~~i~~-~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v 280 (302)
+.|.+ ++||++|+||+++.|.. ++||+++.|++++++
T Consensus 124 ~~I~~~v~Ig~~v~IG~~a~I~~-~~Ig~~~~Igags~V 161 (213)
T 3kwd_A 124 ALIHGPAYIGDGCFIGFRSTVFN-ARVGAGCVVMMHVLI 161 (213)
T ss_dssp CEEEEEEEECTTCEECTTCEEEE-EEECTTCEECSSCEE
T ss_pred cEEcCCCEECCCCEECCCCEEeC-cEECCCCEEcCCCEE
Confidence 99977 99999999999999865 888888888888888
No 36
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.62 E-value=3.5e-15 Score=129.98 Aligned_cols=105 Identities=10% Similarity=0.166 Sum_probs=76.6
Q ss_pred ccccCceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcEEec-eEEccCCEECCCcEEec---------cEECCCC
Q 022113 185 KLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSR-CTVMRGVRIKKHACISS---------SIIGWHS 254 (302)
Q Consensus 185 ~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~~-~~i~~~~~i~~~~~i~~---------~~i~~~~ 254 (302)
++.+++.|++++.|++++.|+++ .|++++.||++|.|+.++.|.+ +.|+++|.|++++.+.+ ++||++|
T Consensus 131 ~I~p~a~I~~~v~Ig~g~~I~~~-~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~~~~~~~~~~~v~IGd~v 209 (304)
T 3eg4_A 131 RAVPNCIVRHSAYIAPNAILMPS-FVNLGAYVDKGAMIDTWATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTIIEDNC 209 (304)
T ss_dssp EECTTCEEBTTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTCCCCEECTTC
T ss_pred EEcCCEEECCCcEECCCCEEeCC-EECCCCEECCCcEEcCCcEECCCCccCCCcEECCCCEECCccccCccCCeEEcCCC
Confidence 34455555555555555555554 5555667777777777677763 77788888888887766 8999999
Q ss_pred EECCCcEEccCcEECCCcEECCceEEcCCeEecCcc
Q 022113 255 TVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKE 290 (302)
Q Consensus 255 ~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~~~~~ 290 (302)
+||+++.|.+++.||++|.|+++++|.+++.+++..
T Consensus 210 ~IG~~a~I~~gv~IG~~avIgagsvV~~g~~Igd~~ 245 (304)
T 3eg4_A 210 FIGARSEVVEGCIVREGSVLGMGVFIGKSTKIVDRA 245 (304)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCCEEETT
T ss_pred EECCCCEEcCCcEECCCcEECCCCEEcCCeEECccc
Confidence 999999999999999999999999988777544443
No 37
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.62 E-value=5.4e-15 Score=127.45 Aligned_cols=101 Identities=13% Similarity=0.197 Sum_probs=78.9
Q ss_pred ccccCceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcEEec-eEEccCCEECCCcEEe---------ccEECCCC
Q 022113 185 KLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSR-CTVMRGVRIKKHACIS---------SSIIGWHS 254 (302)
Q Consensus 185 ~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~~-~~i~~~~~i~~~~~i~---------~~~i~~~~ 254 (302)
++.+++.|++++.|++++.|+++ .|++++.||++|.|+.++.|.+ +.|+++|.|++++.+. +++||++|
T Consensus 106 ~I~p~a~I~~~~~Ig~g~~I~~~-~i~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~g~~~~~~~~~v~IGd~v 184 (276)
T 3gos_A 106 RVVPPATVRKGAFIARNTVLMPS-YVNIGAFVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNC 184 (276)
T ss_dssp EECTTCEEBTTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTC
T ss_pred EECCCcEECCCCEECCCCEEcCC-EEcCCeEECCCCEECCCCEECCCCEECCCCEECCCCEECCccccCCCCCeEECCCC
Confidence 34555566666666666666655 5666788888888888888875 8888888888888884 48999999
Q ss_pred EECCCcEEccCcEECCCcEECCceEEcCCeEe
Q 022113 255 TVGQWARVENMTILGEDVHVCDEIYSNGGVVL 286 (302)
Q Consensus 255 ~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~ 286 (302)
+||+++.|.+++.||++|.|+++++|..++.+
T Consensus 185 ~IG~~a~I~~gv~IG~~avIgagsvV~~~~~I 216 (276)
T 3gos_A 185 FVGARSEVVEGVIVEEGSVISMGVFIGQSTRI 216 (276)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCCE
T ss_pred EECCCCEECCCCEECCCCEECCCCEECCCcEE
Confidence 99999999999999999999999988876543
No 38
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.62 E-value=4.4e-15 Score=126.30 Aligned_cols=97 Identities=18% Similarity=0.234 Sum_probs=81.0
Q ss_pred ccccccCceEecceEEcCCcEECCCCEECCCc----EECCCCEECCCcEEe------------------------ceEEc
Q 022113 183 SLKLATGANIVGNVLVHESAQIGEGCLIGPDV----AVGPGCVVESGVRLS------------------------RCTVM 234 (302)
Q Consensus 183 ~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~----~ig~~~~i~~~~~i~------------------------~~~i~ 234 (302)
.+.+.+++.|.+++.||+++.|+++|.|.+.+ +||++|.|+++|.|. +++|+
T Consensus 65 ~~~I~~~a~I~g~v~IG~~~~I~~~~~I~~~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~g~~~~~~~~~~~~~~~~v~IG 144 (247)
T 1qre_A 65 TAYIDPQASVIGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQDGVVLHALETINEEGEPIEDNIVEVDGKEYAVYIG 144 (247)
T ss_dssp TCEECTTCEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECCSBCTTSCBCGGGCEEETTEEESEEEC
T ss_pred CcEECCCCEEeCCcEECCCCEECCCcEEecCCCCCEEECCCCEECCCeEEEecccccccCcccccceeeccCccCceEEC
Confidence 45566666676777777778888777776543 899999999999986 38899
Q ss_pred cCCEECCCcEEec-cEECCCCEECCCcEEccCcEECCCcEECCceEE
Q 022113 235 RGVRIKKHACISS-SIIGWHSTVGQWARVENMTILGEDVHVCDEIYS 280 (302)
Q Consensus 235 ~~~~i~~~~~i~~-~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v 280 (302)
++|.|+++|.|.+ ++|+++|+||+++.|.+ +.||+++.|+++++|
T Consensus 145 ~~v~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~-v~Ig~~~~IgagsvV 190 (247)
T 1qre_A 145 NNVSLAHQSQVHGPAAVGDDTFIGMQAFVFK-SKVGNNCVLEPRSAA 190 (247)
T ss_dssp TTCEECTTCEEEEEEEECTTCEECTTCEEEE-EEECTTCEECTTCEE
T ss_pred CCCEECCCCEEcCCcEECCCCEECCCCEEec-eEECCCCEECCCCEE
Confidence 9999999999987 99999999999999877 888888888888888
No 39
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.61 E-value=7.6e-15 Score=127.30 Aligned_cols=16 Identities=13% Similarity=0.129 Sum_probs=7.6
Q ss_pred eEEccCCEECCCcEEe
Q 022113 231 CTVMRGVRIKKHACIS 246 (302)
Q Consensus 231 ~~i~~~~~i~~~~~i~ 246 (302)
+.|+++|.|+++++|.
T Consensus 101 v~IG~~~~Ig~~~~I~ 116 (283)
T 4eqy_A 101 LVIGDRNTIREFTTIH 116 (283)
T ss_dssp EEECSSCEECTTEEEE
T ss_pred EEECCCcccCcceeEc
Confidence 3444555555544443
No 40
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.60 E-value=3.3e-14 Score=116.39 Aligned_cols=142 Identities=17% Similarity=0.102 Sum_probs=106.0
Q ss_pred CcEEEEEecC-eeEecCChHHHHHH-----HHHHHHhh-ccccccccccCceEecceEEcCCcEEC--CCCEECCCcEEC
Q 022113 147 GKLFAMVLPG-FWMDIGQPRDYITG-----LRLYLDSL-RKKSSLKLATGANIVGNVLVHESAQIG--EGCLIGPDVAVG 217 (302)
Q Consensus 147 ~~v~~~~~~g-~~~digt~~~~~~a-----~~~~l~~~-~~~~~~~~~~~~~i~~~~~i~~~~~i~--~~~~i~~~~~ig 217 (302)
.++.+|..++ .|..+++.+++ ++ +.....++ .............+++++.++++++|| ++|.|+++++|+
T Consensus 27 ~~v~~f~Dd~~g~~vig~~~~~-~~~iaig~~~~r~~~~~~l~~~~~~~~~~i~~~a~i~~~~~Ig~~~g~~I~~~~~I~ 105 (194)
T 3bfp_A 27 YKECIFLDDFKGMKFESTLPKY-DFFIAIGNNEIRKKIYQKISENGFKIVNLIHKSALISPSAIVEENAGILIMPYVVIN 105 (194)
T ss_dssp CSEEEEEC--------CCCCCC-EEEECCCCHHHHHHHHHHHHTTTCCBCCEECTTCEECTTCEECTTSCCEECTTCEEC
T ss_pred CeEEEEEeCCCCCeEECCcccc-eEEEEeCCHHHHHHHHHHHHHcCCccccccCCeEEECCCceeCCCCCcEEcCCCEEC
Confidence 5566666553 47777765542 11 11111111 111122233447789999999999999 999999999999
Q ss_pred CCCEECCCcEEe-ceEEccCCEECCCcEEec-cEECCCCEECCCcEEccCcEECCCcEECCceEEcCCeEecCc
Q 022113 218 PGCVVESGVRLS-RCTVMRGVRIKKHACISS-SIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHK 289 (302)
Q Consensus 218 ~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~-~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~~~~ 289 (302)
+++.||++|.|. +++|++++.|++++.|+. +.+..++.||++++|+.+++|.++++|++++++++++++...
T Consensus 106 ~~~~IG~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Igagsvv~~~ 179 (194)
T 3bfp_A 106 AKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVLPNLSLADDSILGGGATLVKN 179 (194)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSC
T ss_pred CCCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCcEECCCCEEcCCCEECCCCEECCCCEECCCCEEccc
Confidence 999999999997 799999999999999974 999999999999999999999999999999999999988544
No 41
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=99.60 E-value=3e-15 Score=129.09 Aligned_cols=100 Identities=20% Similarity=0.188 Sum_probs=79.7
Q ss_pred ccccCceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcEEe-----ceEEccCCEECCCcEEec---------cEE
Q 022113 185 KLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLS-----RCTVMRGVRIKKHACISS---------SII 250 (302)
Q Consensus 185 ~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~-----~~~i~~~~~i~~~~~i~~---------~~i 250 (302)
.+++++.|+|.+.|++++.||+++.|+++++|+.++.||++|.|. .+.|+++|.|++++.|.. ++|
T Consensus 180 vI~~gv~I~P~AvI~~GA~IGeGv~Igp~a~Vn~na~IGdg~iI~~~a~igv~IGdnv~IgpGa~IgG~~~~~~~~~V~I 259 (347)
T 3r5d_A 180 VVPAGVRIADTARVRLGAYIGEGTTVMHEGFVNFNAGTEGPGMIEGRVSAGVFVGKGSDLGGGCSTMGTLSGGGNIVISV 259 (347)
T ss_dssp CCCTTEEESSGGGBBTTEEECTTEEECTTCEECTTEEESSSEEECSEECTTCEECTTEEECTTCEECC------CCCCEE
T ss_pred eccCCcEECCcCEECCCCEECCCCEECCCCEECCCCEECCCcEEcCCceEeEEECCCCEECCCCEEccccCCCCccceEE
Confidence 345566666666666666666666666666666666666666654 489999999999999965 799
Q ss_pred CCCCEECCCcEEccCcEECCCcEECCceEEcCCeEe
Q 022113 251 GWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVL 286 (302)
Q Consensus 251 ~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~ 286 (302)
|++|+||+++.| ++.||++|.|++|++|..++++
T Consensus 260 Gdnv~IGAnAtI--GVtIGd~~iIGAGSVVtkdt~I 293 (347)
T 3r5d_A 260 GEGCLIGANAGI--GIPLGDRNIVEAGLYITAGTKV 293 (347)
T ss_dssp CTTCEECTTCEE--CSCBCTTCEECTTCEECTTCEE
T ss_pred CCCCEECCCCEE--eeEECCCCEECCCCEECCCCEE
Confidence 999999999999 8999999999999999999863
No 42
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.60 E-value=1.3e-14 Score=126.89 Aligned_cols=96 Identities=17% Similarity=0.256 Sum_probs=69.5
Q ss_pred CceEecceEEcCCcEECCCCEECC-----CcEECCCCEECCCcEEe-ceEEccCCEECCCcEEec---------cEECCC
Q 022113 189 GANIVGNVLVHESAQIGEGCLIGP-----DVAVGPGCVVESGVRLS-RCTVMRGVRIKKHACISS---------SIIGWH 253 (302)
Q Consensus 189 ~~~i~~~~~i~~~~~i~~~~~i~~-----~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~---------~~i~~~ 253 (302)
++.|.+++.|++++.||++|+|++ ++.||++|.|+.++.|. ++.|+++|.|++++.|.+ ++||++
T Consensus 145 ~~~I~p~a~I~~~~~IG~g~~I~~~~I~~g~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~I~~~~~~~~~~~v~IGd~ 224 (316)
T 3tk8_A 145 GFRVVPPAIARRGSFIAKNVVLMPSYTNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPVIIEDN 224 (316)
T ss_dssp CCEECTTCEEBTTCEECTTCEECSEEECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTT
T ss_pred CcEEeCCeEEeCCcEEcCCCEECCCEEeCCCEECCCCEEccceEECCCCEECCCCEEcCCCEECCCcccccCCCcEECCC
Confidence 455666666666666666665554 55566666666555554 466777777777777654 789999
Q ss_pred CEECCCcEEccCcEECCCcEECCceEEcCCe
Q 022113 254 STVGQWARVENMTILGEDVHVCDEIYSNGGV 284 (302)
Q Consensus 254 ~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~ 284 (302)
|+||+++.|.+++.||+++.|+++++|..++
T Consensus 225 v~IG~~a~I~~gv~IG~g~vIgagsvV~~~t 255 (316)
T 3tk8_A 225 CFIGARSEVVEGVIVEENSVISMGVYLGQST 255 (316)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred CEECCCCEEcCCCEECCCCEEcCCCEEcCCe
Confidence 9999999998889999999999988888755
No 43
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.60 E-value=1.9e-14 Score=124.26 Aligned_cols=91 Identities=22% Similarity=0.365 Sum_probs=53.8
Q ss_pred cccccCceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcEEec---------------eEEccCCEECCCcEE-ec
Q 022113 184 LKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSR---------------CTVMRGVRIKKHACI-SS 247 (302)
Q Consensus 184 ~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~~---------------~~i~~~~~i~~~~~i-~~ 247 (302)
+.+++++.|.+++.|++++.|+++|+|++++.||++|.|++++.|.. +.|+++|.|+++++| ++
T Consensus 9 ~~I~~~a~I~~~~~Ig~~~~Ig~~~~I~~~v~Ig~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~Ig~~~~I~~~~~i~~~ 88 (273)
T 3fs8_A 9 AIIKEGVIIGENVTIEDNVYIDYGCIIRDNVHIKKGSFIGARSILGEYLVDFYNDRINKKHPLIIGENALIRTENVIYGD 88 (273)
T ss_dssp CEECTTCEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEEEECCTTHHHHTCCCCCCEEECTTCEECTTCEEESS
T ss_pred eEECCCcEECCCCEECCCcEECCCCEECCCCEECCCcEECCCcEeCCccccccccccccccceEECCCCEECCCCEEeCC
Confidence 44556666666666666666666666666666666666666666652 667777777766666 34
Q ss_pred cEECCCCEECCCcEEccCcEECCCcEE
Q 022113 248 SIIGWHSTVGQWARVENMTILGEDVHV 274 (302)
Q Consensus 248 ~~i~~~~~i~~~~~i~~~~~i~~~~~v 274 (302)
++|++++.|+.++.|+.++.|++++.|
T Consensus 89 ~~Ig~~~~Ig~~~~I~~~~~Ig~~~~I 115 (273)
T 3fs8_A 89 TIIGDNFQTGHKVTIRENTKIGNNVKI 115 (273)
T ss_dssp CEECTTCEECSSCEECSSCEECSSCEE
T ss_pred CEECCCCEECCceEECCCCEECCCCEE
Confidence 555555555544444444444443333
No 44
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.59 E-value=1.9e-14 Score=123.81 Aligned_cols=16 Identities=19% Similarity=0.044 Sum_probs=7.3
Q ss_pred CcEECCCCEECCCcEE
Q 022113 213 DVAVGPGCVVESGVRL 228 (302)
Q Consensus 213 ~~~ig~~~~i~~~~~i 228 (302)
++.||++|.|++++.|
T Consensus 49 ~~~IG~~~~I~~~~~I 64 (270)
T 1j2z_A 49 HTFVGKNTEIFPFAVL 64 (270)
T ss_dssp EEEECTTCEECTTCEE
T ss_pred CeEEcCCCEEEeeeEE
Confidence 3444444444444444
No 45
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=99.58 E-value=7.1e-15 Score=125.80 Aligned_cols=100 Identities=20% Similarity=0.188 Sum_probs=85.1
Q ss_pred cccccCceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcEEe-----ceEEccCCEECCCcEEec---------cE
Q 022113 184 LKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLS-----RCTVMRGVRIKKHACISS---------SI 249 (302)
Q Consensus 184 ~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~-----~~~i~~~~~i~~~~~i~~---------~~ 249 (302)
..+++++.|+|.++|++++.||+++.|+++++|+.++.++.+|.|. .+.|+++|.|++++.|.. ++
T Consensus 156 ~vI~~gv~I~P~AvI~~gA~IGeGv~Igp~~fVniga~Ig~g~~In~~i~iGv~IGd~v~IgpGa~IgG~~~~~~~~~V~ 235 (332)
T 3fsy_A 156 YVVPTGVRIADADRVRLGAHLAPGTTVMHEGFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGTLSGGGTHVIS 235 (332)
T ss_dssp TCCCTTCEESCGGGBBTTEEECTTCEECTTCEECTTEEESSCCEECSEECTTCEECTTCEECTTCEECSBCC---CCBCE
T ss_pred eecCCCcEECCcCEECCCCEECCCCEEccccEEEECCeECcCCEECCceecceEECCCCEECCCCEEcCCCCCCCccceE
Confidence 3466777788888888888888888888888888888888877774 478999999999999965 89
Q ss_pred ECCCCEECCCcEEccCcEECCCcEECCceEEcCCeE
Q 022113 250 IGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVV 285 (302)
Q Consensus 250 i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v 285 (302)
||++|+||+++.| ++.||++|.|++|++|..+++
T Consensus 236 IGDnv~IGanAtI--gVtIGd~~iIGAGSVVtkdt~ 269 (332)
T 3fsy_A 236 IGKRCLLGANSGL--GISLGDDCVVEAGLYVTAGTR 269 (332)
T ss_dssp ECTTCEECTTCEE--CSCBCSSCEECTTCEECTTCE
T ss_pred ECCCCEECCCCEE--eeEECCCCEECCCCEECCCCE
Confidence 9999999999999 899999999999999888874
No 46
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.57 E-value=3.6e-14 Score=126.86 Aligned_cols=41 Identities=20% Similarity=0.325 Sum_probs=18.7
Q ss_pred eEEEeCCCCcEEEEEecCCCCC-CCeEEEEEEEeCHhhHhhc
Q 022113 88 VVVMEESTGKVEKFVEKPKLFV-GNKINAGIYLLNPAVLDRI 128 (302)
Q Consensus 88 ~v~~d~~~~~v~~~~ekp~~~~-~~~~~~Giy~~~~~~l~~l 128 (302)
+..++++.-.-+.|.++|+... -....+++.+++++..+.+
T Consensus 32 ~~~~~~a~~~~~~f~~~~~~~~~~~~~~a~~~i~~~~~~~~~ 73 (357)
T 4e79_A 32 LASLENAEVNHLTFVNGEKHLDQAKVSRAGAYIVTAALKEHL 73 (357)
T ss_dssp ECCTTTCCTTEEEECCSGGGHHHHHTCCCSEEEECHHHHHTC
T ss_pred ecChhcCCCCcEEEeCChhHHHHHhcCCCEEEEEcHHHhhhc
Confidence 3333333334455665554320 0112346677776655443
No 47
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=99.57 E-value=5.9e-14 Score=117.23 Aligned_cols=100 Identities=17% Similarity=0.175 Sum_probs=81.5
Q ss_pred CceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcEEe-ceEEccCCEECCCcEEec-cEECCCCEECCCcEEccCc
Q 022113 189 GANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLS-RCTVMRGVRIKKHACISS-SIIGWHSTVGQWARVENMT 266 (302)
Q Consensus 189 ~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~-~~i~~~~~i~~~~~i~~~~ 266 (302)
.+.+++.+.+++++.|+++|.|+++++|++++.||++|.|. +++|+++|.|+++|.|+. +.++.++.||++++|+.++
T Consensus 99 ~~~i~~~a~i~~~v~IG~g~~I~~~~~i~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~ 178 (220)
T 4ea9_A 99 VNAIHPSAVVSPSVRLGEGVAVMAGVAINADSWIGDLAIINTGAVVDHDCRLGAACHLGPASALAGGVSVGERAFLGVGA 178 (220)
T ss_dssp CCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTC
T ss_pred CCcCCCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCC
Confidence 36677888888888888888888888888888888888887 688888888888888865 8888888888888888888
Q ss_pred EECCCcEECCceEEcCCeEecC
Q 022113 267 ILGEDVHVCDEIYSNGGVVLPH 288 (302)
Q Consensus 267 ~i~~~~~v~~~~~v~~~~v~~~ 288 (302)
+|.++++||+++++++++++..
T Consensus 179 ~i~~~~~Ig~~~~igagsvv~~ 200 (220)
T 4ea9_A 179 RVIPGVTIGADTIVGAGGVVVR 200 (220)
T ss_dssp EECTTCEECTTCEECTTCEECS
T ss_pred EEcCCcEECCCCEECCCCEEcc
Confidence 8888888888888888887643
No 48
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.57 E-value=5e-14 Score=121.04 Aligned_cols=43 Identities=26% Similarity=0.281 Sum_probs=22.3
Q ss_pred ECCCCEECCCcEECCCCEECCCcEE--------------eceEEccCCEECCCcEEe
Q 022113 204 IGEGCLIGPDVAVGPGCVVESGVRL--------------SRCTVMRGVRIKKHACIS 246 (302)
Q Consensus 204 i~~~~~i~~~~~ig~~~~i~~~~~i--------------~~~~i~~~~~i~~~~~i~ 246 (302)
|+++++|.++++||++|.|++++.| .++.|+++|.|+++++|.
T Consensus 43 I~~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~ 99 (266)
T 3r0s_A 43 IKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATIN 99 (266)
T ss_dssp ECTTCEECSSCEECTTCEECTTCEEEECCSCSCCC----CEEEECTTCEECTTCEEE
T ss_pred EcCCeEEeCCcEECCCcEEccCceeccCCccccccCCcCceEEECCCCEECCceEec
Confidence 3333333334455555555555555 345566666666665553
No 49
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.57 E-value=4.2e-14 Score=121.51 Aligned_cols=97 Identities=20% Similarity=0.290 Sum_probs=77.0
Q ss_pred cccccCceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcEEe-ceEEccCCEECCCcEE--------------ecc
Q 022113 184 LKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLS-RCTVMRGVRIKKHACI--------------SSS 248 (302)
Q Consensus 184 ~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i--------------~~~ 248 (302)
+.+++.+.|++++.|++++.|+++|.|++++.||++|.|++++.|. ++.|+++|.|++++.| ..+
T Consensus 5 ~~I~p~a~I~~~a~Ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v 84 (266)
T 3r0s_A 5 KKIHPSAVIEEGAQLGDDVVIEAYAYVSKDAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGV 84 (266)
T ss_dssp -CBCTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEEEECCSCSCCC----CEE
T ss_pred cccCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCeEEeCCcEECCCcEEccCceeccCCccccccCCcCceE
Confidence 4578888999999999999999999999999999999999999998 7999999999999999 478
Q ss_pred EECCCCEECCCcEEccC-------cEECCCcEECCceEE
Q 022113 249 IIGWHSTVGQWARVENM-------TILGEDVHVCDEIYS 280 (302)
Q Consensus 249 ~i~~~~~i~~~~~i~~~-------~~i~~~~~v~~~~~v 280 (302)
+||+++.|+++++|..+ +.||+++.+++++.+
T Consensus 85 ~IG~~~~Ig~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I 123 (266)
T 3r0s_A 85 VIGKNATIREFATINSGTAKGDGFTRIGDNAFIMAYCHI 123 (266)
T ss_dssp EECTTCEECTTCEEECCCTTTTSEEEECTTCEECTTCEE
T ss_pred EECCCCEECCceEecCCcccCCccEEECCCceeCCcceE
Confidence 88888888888877532 444444444444433
No 50
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.57 E-value=5.3e-14 Score=120.89 Aligned_cols=17 Identities=12% Similarity=0.194 Sum_probs=9.0
Q ss_pred ceEEccCCEECCCcEEe
Q 022113 230 RCTVMRGVRIKKHACIS 246 (302)
Q Consensus 230 ~~~i~~~~~i~~~~~i~ 246 (302)
++.|++++.|+++++|.
T Consensus 85 ~~~IG~~~~Ig~~~~I~ 101 (265)
T 4e6u_A 85 WLEIGNNNLIREHCSLH 101 (265)
T ss_dssp EEEECSSCEECTTCEEE
T ss_pred eEEECCCeEECCceEEC
Confidence 34555555555555553
No 51
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.56 E-value=7.8e-14 Score=124.02 Aligned_cols=86 Identities=17% Similarity=0.289 Sum_probs=35.9
Q ss_pred EecCChHHHHHHHHHHHHhhccccccccccCceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcEEe-ceEEccCC
Q 022113 159 MDIGQPRDYITGLRLYLDSLRKKSSLKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLS-RCTVMRGV 237 (302)
Q Consensus 159 ~digt~~~~~~a~~~~l~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~ 237 (302)
+-+.+|+..+.....++.... ...+.+++.+.|.+++.+++++.|+++++|+++++||++|.|++++.|. ++.|+++|
T Consensus 74 ~~~~~p~~~~~~~~~~~~~~~-~~~~~i~~~a~i~~~a~ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~~~IG~~~ 152 (341)
T 3eh0_A 74 LVVKNPYLTYARMAQILDTTP-QPAQNIAPSAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGS 152 (341)
T ss_dssp EECSCHHHHHHHHHHHHCCCC-CSCCSBCTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred EEeCCHHHHHHHHHHHhcccC-CccCccCCCcEECCCcEECCCCEECCCcEECCCcEECCCcEECCCcEECCCCEECCCc
Confidence 345566654443333332211 1223444444444444444444444444444444444444444444442 33333333
Q ss_pred EECCCcEE
Q 022113 238 RIKKHACI 245 (302)
Q Consensus 238 ~i~~~~~i 245 (302)
.|+++++|
T Consensus 153 ~I~~~~~I 160 (341)
T 3eh0_A 153 RLWANVTI 160 (341)
T ss_dssp EECSSCEE
T ss_pred EECCCcEE
Confidence 33333333
No 52
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.56 E-value=6.9e-14 Score=119.73 Aligned_cols=48 Identities=13% Similarity=0.084 Sum_probs=22.4
Q ss_pred cCCcEECCCCEECCCcEECCCCEECCCcEE-------------e-ceEEccCCEECCCcEEe
Q 022113 199 HESAQIGEGCLIGPDVAVGPGCVVESGVRL-------------S-RCTVMRGVRIKKHACIS 246 (302)
Q Consensus 199 ~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i-------------~-~~~i~~~~~i~~~~~i~ 246 (302)
++++.|+++|.|.++++||++|.|++++.| . ++.|+++|.|++++.|.
T Consensus 34 G~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~ 95 (259)
T 3hsq_A 34 QEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVIGDHNIFREYSNIH 95 (259)
T ss_dssp CTTCEECTTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEECSSCEECTTCEEE
T ss_pred CCCCEEcCCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEEECCCcEECCCCEEC
Confidence 333333333333334444455555555555 2 34555555555555554
No 53
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.55 E-value=4.5e-14 Score=119.53 Aligned_cols=101 Identities=15% Similarity=0.240 Sum_probs=84.9
Q ss_pred cCceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcEEe-ceEEccCCEECCCcEEec-cEECCC--------CEEC
Q 022113 188 TGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLS-RCTVMRGVRIKKHACISS-SIIGWH--------STVG 257 (302)
Q Consensus 188 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~-~~i~~~--------~~i~ 257 (302)
+++.|++++.+++++.||++|.|+++++|+.++.||++|.|. +++|++++.||++|.|+. +++... +.|+
T Consensus 90 ~~~~I~~~a~I~~~v~Ig~~~~I~~~s~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig 169 (240)
T 3r8y_A 90 IKARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVE 169 (240)
T ss_dssp CSSEECTTCEEBSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECCCCSCTTSCCCEEC
T ss_pred CCCEECCCCEECCCcEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCccCCCCCCcEEC
Confidence 347788888888888888899888889998889999999987 788888999999998864 666543 8888
Q ss_pred CCcEEccCcEECCCcEECCceEEcCCeEecC
Q 022113 258 QWARVENMTILGEDVHVCDEIYSNGGVVLPH 288 (302)
Q Consensus 258 ~~~~i~~~~~i~~~~~v~~~~~v~~~~v~~~ 288 (302)
++++|+.+++|.++++||++++|++++++..
T Consensus 170 ~~~~IG~~~~I~~~~~Ig~~~~I~~gsvV~~ 200 (240)
T 3r8y_A 170 DDVVIGANVVVLEGVTVGKGAVVAAGAVVTE 200 (240)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CCCEECCCCEECCCcEECCCCEECCCCEECC
Confidence 8999988899989999999999988887654
No 54
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.55 E-value=5.1e-14 Score=126.43 Aligned_cols=41 Identities=24% Similarity=0.298 Sum_probs=20.6
Q ss_pred ceEEEeCCCCcEEEEEecCCCCC-CCeEEEEEEEeCHhhHhh
Q 022113 87 GVVVMEESTGKVEKFVEKPKLFV-GNKINAGIYLLNPAVLDR 127 (302)
Q Consensus 87 g~v~~d~~~~~v~~~~ekp~~~~-~~~~~~Giy~~~~~~l~~ 127 (302)
++..++++....+.|.++|+... .....++..+++++.+..
T Consensus 49 ~~~~~~~a~~~~l~fl~~~~~~~~~~~~~a~~~i~~~~~~~~ 90 (372)
T 3pmo_A 49 GLATLQEAGPAQLSFLANPQYRKYLPESRAGAVLLTAADADG 90 (372)
T ss_dssp EEECGGGCCTTSEEECCCGGGGGGGGGCCCSEEEECHHHHTT
T ss_pred eecChhhCCCCeEEEECCHHHHHHHhcCCCcEEEEcHHHHhh
Confidence 33344443444556666665421 112345677777765543
No 55
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.55 E-value=7.5e-14 Score=119.94 Aligned_cols=81 Identities=22% Similarity=0.324 Sum_probs=67.3
Q ss_pred ccccccCceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcEEe-ceEEccCCEECCCcEE-------------ecc
Q 022113 183 SLKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLS-RCTVMRGVRIKKHACI-------------SSS 248 (302)
Q Consensus 183 ~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i-------------~~~ 248 (302)
...+++++.|.+++.|++++.|+++|.|++++.||++|.|++++.|. ++.|+++|.|++++.| .++
T Consensus 7 ~~~I~p~a~i~~~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~ 86 (265)
T 4e6u_A 7 HDLIHSTAIIDPSAVIASDVQIGPYCIIGPQVTIGAGTKLHSHVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWL 86 (265)
T ss_dssp -CCBCTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECSSCEECSSEEECSSCEECTTCEEEECCCCTTCCSCCCEE
T ss_pred CCeECCCCEECCCCEECCCCEECCCeEECCCCEECCCCEEcCCcEEeCCcEECCCCEEcCCcEECCccccccccCCCCeE
Confidence 35678888888888888888888888888888888888888888888 5889999999999998 357
Q ss_pred EECCCCEECCCcEEc
Q 022113 249 IIGWHSTVGQWARVE 263 (302)
Q Consensus 249 ~i~~~~~i~~~~~i~ 263 (302)
+||+++.|+++++|.
T Consensus 87 ~IG~~~~Ig~~~~I~ 101 (265)
T 4e6u_A 87 EIGNNNLIREHCSLH 101 (265)
T ss_dssp EECSSCEECTTCEEE
T ss_pred EECCCeEECCceEEC
Confidence 788888888777775
No 56
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.55 E-value=7.6e-14 Score=119.71 Aligned_cols=48 Identities=13% Similarity=0.174 Sum_probs=26.2
Q ss_pred eEEccCCEECCCcEEec--------cEECCCCEECCCcEEccCcEECCCcEECCce
Q 022113 231 CTVMRGVRIKKHACISS--------SIIGWHSTVGQWARVENMTILGEDVHVCDEI 278 (302)
Q Consensus 231 ~~i~~~~~i~~~~~i~~--------~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~ 278 (302)
+.|+++|.|+++++|.. ++||++++|++++.|..++.||+++.+++++
T Consensus 84 ~~IG~~~~Ig~~~~I~~~~~~~~~~~~IG~~~~Ig~~~~I~~~~~Ig~~~~i~~~~ 139 (262)
T 2qia_A 84 VEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNA 139 (262)
T ss_dssp EEECSSCEECTTCEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTC
T ss_pred eEECCCceeCCCCEEcCCccCCCCcCEECCCcEEeeeeEECCCCEECCCeEECCcc
Confidence 45555555555555532 5666666666666555555555444444433
No 57
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.55 E-value=8.3e-15 Score=130.00 Aligned_cols=151 Identities=20% Similarity=0.212 Sum_probs=109.6
Q ss_pred EEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCeecCc--CHH----HHHHHHHHcCCcEEEEEEeCCCCCCcceEE
Q 022113 17 ICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEY--PFA----EMIEFHKAHGGEASIMVTKVDEPSKYGVVV 90 (302)
Q Consensus 17 ~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~~~--~l~----~~~~~~~~~~~~~~l~~~~~~~~~~~g~v~ 90 (302)
.++.|+.++||++++..|+..+.. ++.+++++||+++.. +|. ++++.|.+.+..+|+.+.+..+...||++.
T Consensus 76 ~ii~e~~~~gta~ai~~a~~~~~~--~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~~vt~~i~p~~~~~~yG~I~ 153 (336)
T 2x65_A 76 NIIAEPMKKNTAPACFIGTKLADD--DEPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGLFTFGIVPTRPETGYGYIE 153 (336)
T ss_dssp GEEEESSCCCHHHHHHHHHTTSCT--TCEEEEEETTCBCCCHHHHHHHHHHHHHHHHHHCSEEEEEECCCSCCSSSEEEE
T ss_pred eEEeCCCCCCcHHHHHHHHHhhCC--CCEEEEEcCCceeccHHHHHHHHHHHHHHHHhcCCeEEEEeecccCCCCceEEE
Confidence 457788899999999999886632 367899999997643 444 445557665677888887776778999998
Q ss_pred EeCCC-----CcEEEEEecCCCCC--------CCeEEEEEEEeCHhhH-hhccCCCC--------------CccccchHH
Q 022113 91 MEEST-----GKVEKFVEKPKLFV--------GNKINAGIYLLNPAVL-DRIELRPT--------------SIEKEVFPK 142 (302)
Q Consensus 91 ~d~~~-----~~v~~~~ekp~~~~--------~~~~~~Giy~~~~~~l-~~l~~~~~--------------~~~~~~~~~ 142 (302)
.++ + +++..|.|||.... ..++++|+|+|+++.| +.++...+ ++..+.|+.
T Consensus 154 ~~~-~~~~~~~~V~~f~EKp~~~~a~~~~~~g~y~~n~Giy~~~~~~ll~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~ 232 (336)
T 2x65_A 154 IGE-ELEEGVHKVAQFREKPDLETAKKFVESGRFLWNSGMFLWKAREFIEEVKVCEPSIYENLKDVDPRNFEELKKAYEK 232 (336)
T ss_dssp EEE-EEETTEEEEEEEEESCCHHHHHHHHHHTCEEEEEEEEEEEHHHHHHHHHHHCHHHHHHHTTCCTTCHHHHHHHHHH
T ss_pred ECC-ccCCCccEEEEEEECCChHHHHHHHhcCCeEEEeeeEEEEHHHHHHHHHHHCHHHHHHHHHhhhhhhhHHHHHHHh
Confidence 874 3 68999999996421 2589999999999876 44421000 111233343
Q ss_pred ---------HHh-cCcEEEEEecCeeEecCChHHHHHH
Q 022113 143 ---------IAL-EGKLFAMVLPGFWMDIGQPRDYITG 170 (302)
Q Consensus 143 ---------l~~-~~~v~~~~~~g~~~digt~~~~~~a 170 (302)
+.+ ..++.+++++++|.|+|++++|+++
T Consensus 233 ~~~~sidy~vme~~~~v~v~~~~~~W~DiGt~~~l~~~ 270 (336)
T 2x65_A 233 VPSISVDYAVMEKSKKVRVVKADFEWSDLGNWSSVREI 270 (336)
T ss_dssp SCCCCHHHHTTTTCSCEEEEECSSCCBCCCSHHHHHHH
T ss_pred CccccHHHHHhcCCCeEEEEEecCCCcCCCCHHHHHhh
Confidence 233 4689999999999999999999887
No 58
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.54 E-value=1.1e-13 Score=118.41 Aligned_cols=98 Identities=9% Similarity=0.114 Sum_probs=59.2
Q ss_pred ccccccCceEecceEEcCCcEECCCCEE-------------CCCcEECCCCEECCCcEEe-------ceEEccCCEECCC
Q 022113 183 SLKLATGANIVGNVLVHESAQIGEGCLI-------------GPDVAVGPGCVVESGVRLS-------RCTVMRGVRIKKH 242 (302)
Q Consensus 183 ~~~~~~~~~i~~~~~i~~~~~i~~~~~i-------------~~~~~ig~~~~i~~~~~i~-------~~~i~~~~~i~~~ 242 (302)
.+.+.+++.|.+++.|++++.|+++|.| .+.++||++|.|++++.|. .+.|+++|.|+++
T Consensus 36 ~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~IG~~~~I~~~ 115 (259)
T 3hsq_A 36 GTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVIGDHNIFREYSNIHKGTKEDSPTVIGNKNYFMGN 115 (259)
T ss_dssp TCEECTTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEECSSCEECTTCEEECCSBTTBCEEECSSCEECTT
T ss_pred CCEEcCCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEEECCCcEECCCCEECCCccCCCcEEECCCcEEcCC
Confidence 3445555666666667777777777777 5667777888888888876 5666776666666
Q ss_pred cEEe-ccEECCCCEECCCcEEccCcEECCCcEECCceEE
Q 022113 243 ACIS-SSIIGWHSTVGQWARVENMTILGEDVHVCDEIYS 280 (302)
Q Consensus 243 ~~i~-~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v 280 (302)
+.|. ++.|+++++|+.++.+..++.||+++.||.+++|
T Consensus 116 ~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V 154 (259)
T 3hsq_A 116 SHVGHDCILGNNNILTHGAVLAGHVTLGNFAFISGLVAV 154 (259)
T ss_dssp CEECTTCEECSSCEECTTCEECTTCEECSSCEECSSEEE
T ss_pred cEECCCcEECCccEEcCCceECCccEECCCcEEeCCCEE
Confidence 6663 3555555555444444444444444444444333
No 59
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.54 E-value=8.3e-14 Score=121.71 Aligned_cols=89 Identities=20% Similarity=0.208 Sum_probs=55.0
Q ss_pred EcCCcEECCCCEECCCcEECCCCEECCCcEEe-ceEEcc--------CCEECCCcEEe-ccEECCCCEECCCcEEccCcE
Q 022113 198 VHESAQIGEGCLIGPDVAVGPGCVVESGVRLS-RCTVMR--------GVRIKKHACIS-SSIIGWHSTVGQWARVENMTI 267 (302)
Q Consensus 198 i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~--------~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~~~~ 267 (302)
++.++.||++|.|..+++||.+|.||++|.|. ++.|+. ++.||++|.|+ +++|++++.||+++.|+.+++
T Consensus 171 I~~g~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~I~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~g~vIgagsv 250 (316)
T 3tk8_A 171 TNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPVIIEDNCFIGARSEVVEGVIVEENSVISMGVY 250 (316)
T ss_dssp ECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECTTCEECTTCEECTTCEECTTCE
T ss_pred EeCCCEECCCCEEccceEECCCCEECCCCEEcCCCEECCCcccccCCCcEECCCCEECCCCEEcCCCEECCCCEEcCCCE
Confidence 33355666666666666777777777777765 455555 56666666663 366666666666666666666
Q ss_pred ECCCcEECCce-------EEcCCeEe
Q 022113 268 LGEDVHVCDEI-------YSNGGVVL 286 (302)
Q Consensus 268 i~~~~~v~~~~-------~v~~~~v~ 286 (302)
|+++++|++.+ .|++++++
T Consensus 251 V~~~t~I~d~~~~~v~~g~Vp~gsvV 276 (316)
T 3tk8_A 251 LGQSTKIYDRETGEVTYGRIPAGSVV 276 (316)
T ss_dssp ECTTCCEEETTTCCEECSEECTTEEE
T ss_pred EcCCeeecccccccccccEeCCCCEE
Confidence 66666555544 56666654
No 60
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.53 E-value=1.5e-13 Score=123.33 Aligned_cols=103 Identities=23% Similarity=0.375 Sum_probs=57.1
Q ss_pred ccCceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcEEe-------ceEEccCCEECCCcEEe-------------
Q 022113 187 ATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLS-------RCTVMRGVRIKKHACIS------------- 246 (302)
Q Consensus 187 ~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~-------~~~i~~~~~i~~~~~i~------------- 246 (302)
.+++.|+++++|++++.||++|+|+++++|++++.||++|.|. ++.|+++|.|+++++|+
T Consensus 135 g~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~v~IG~~~~I~~~~~I~~~~~IG~~v~I~~g~~Ig~dgfg~~~~~g~~ 214 (372)
T 3pmo_A 135 DPSASVGAYAVIESGARIGAGVSIGAHCVIGARSVIGEGGWLAPRVTLYHDVTIGARVSIQSGAVIGGEGFGFANEKGVW 214 (372)
T ss_dssp CTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEEEECCCCEEEETTEE
T ss_pred CCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcccCCCcEEEeeeEECceeeccCCcEEecCcccccccCCcc
Confidence 3344444444444455555555555555555555555555554 34455555555555553
Q ss_pred -------ccEECCCCEECCCcEEc----cCcEECCCcEECCceEEcCCeEecCc
Q 022113 247 -------SSIIGWHSTVGQWARVE----NMTILGEDVHVCDEIYSNGGVVLPHK 289 (302)
Q Consensus 247 -------~~~i~~~~~i~~~~~i~----~~~~i~~~~~v~~~~~v~~~~v~~~~ 289 (302)
+++||+++.||++++|. .+++||+++.|+.++.+..++.++..
T Consensus 215 ~~i~~~g~v~IGd~v~IGa~~~I~~g~~~~t~IG~~~~I~~~v~I~~~v~IG~~ 268 (372)
T 3pmo_A 215 QKIAQIGGVTIGDDVEIGANTTIDRGALSDTLIGNGVKLDNQIMIAHNVQIGDH 268 (372)
T ss_dssp EECCCCCCEEECSSCEECTTCEEECCSSSCEEECTTCEECTTCEECTTCEECTT
T ss_pred eeccccCCeEECCCCEECCCcEEccCcccceEECCCCEECCCCEECCCCEECCC
Confidence 46777777777777775 44666666666665555555554433
No 61
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.53 E-value=1.4e-13 Score=118.02 Aligned_cols=59 Identities=12% Similarity=0.117 Sum_probs=27.9
Q ss_pred ECCCCEECCCcEEe--------ceEEccCCEECCCcEE-eccEECCCCEECCCcEEccCcEECCCcEE
Q 022113 216 VGPGCVVESGVRLS--------RCTVMRGVRIKKHACI-SSSIIGWHSTVGQWARVENMTILGEDVHV 274 (302)
Q Consensus 216 ig~~~~i~~~~~i~--------~~~i~~~~~i~~~~~i-~~~~i~~~~~i~~~~~i~~~~~i~~~~~v 274 (302)
||++|.|++++.|. ++.|+++|.|++++.| .++.|+++++|+.++.+..++.||+++.|
T Consensus 86 IG~~~~Ig~~~~I~~~~~~~~~~~~IG~~~~Ig~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~I 153 (262)
T 2qia_A 86 IGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAII 153 (262)
T ss_dssp ECSSCEECTTCEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEE
T ss_pred ECCCceeCCCCEEcCCccCCCCcCEECCCcEEeeeeEECCCCEECCCeEECCcccccCCcEECCCcEE
Confidence 34444444444443 2556666666655555 33555555444444444333333333333
No 62
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.53 E-value=6.8e-14 Score=114.26 Aligned_cols=88 Identities=22% Similarity=0.259 Sum_probs=58.4
Q ss_pred cceEEcCCcEECCCCEECCCcEECCCCEECCCcEEe----ceEEccCCEECCCcEEe------ccEECCCCEECCCcEEc
Q 022113 194 GNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLS----RCTVMRGVRIKKHACIS------SSIIGWHSTVGQWARVE 263 (302)
Q Consensus 194 ~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~----~~~i~~~~~i~~~~~i~------~~~i~~~~~i~~~~~i~ 263 (302)
+.+.+++++.|++++.|.+++.||++|.|++++.|. ++.|+++|.|++++.|. +++|++++.|++++.|
T Consensus 32 ~~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~~~i- 110 (191)
T 3ixc_A 32 VSPSVDSTAFIAGNARIIGDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHSCIL- 110 (191)
T ss_dssp BCCEECTTSEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTTCEECTTCEE-
T ss_pred CCCEECCCCEECCCCEEeCCcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCCCEECCCCEE-
Confidence 445556666666666666677777777777777775 34788888888888886 7888888887777665
Q ss_pred cCcEECCCcEECCceEEcC
Q 022113 264 NMTILGEDVHVCDEIYSNG 282 (302)
Q Consensus 264 ~~~~i~~~~~v~~~~~v~~ 282 (302)
.+++||++|.|++++++.+
T Consensus 111 ~~~~Ig~~~~Ig~~~~I~~ 129 (191)
T 3ixc_A 111 HACTLGNNAFVGMGSIVMD 129 (191)
T ss_dssp CSCEECTTCEECTTCEECT
T ss_pred ECCEECCCCEECCCCEEeC
Confidence 2344554444444444333
No 63
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.53 E-value=1.2e-13 Score=118.82 Aligned_cols=41 Identities=29% Similarity=0.473 Sum_probs=15.6
Q ss_pred cCceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcEE
Q 022113 188 TGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRL 228 (302)
Q Consensus 188 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i 228 (302)
+.+.|++++.|++++.|+++|.|++++.||++|.|++++.|
T Consensus 6 p~a~I~~~a~Ig~~~~Ig~~~~I~~~v~IG~~~~I~~~~~I 46 (270)
T 1j2z_A 6 KTAIISPKAEINKGVEIGEFCVIGDGVKLDEGVKLHNNVTL 46 (270)
T ss_dssp TTCEECTTSEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred CCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCcEE
Confidence 33333333333333333333333333333333333333333
No 64
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.53 E-value=1.4e-13 Score=120.61 Aligned_cols=61 Identities=18% Similarity=0.352 Sum_probs=28.0
Q ss_pred ccccCceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcEEe-ceEEccCCEECCCcEE
Q 022113 185 KLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLS-RCTVMRGVRIKKHACI 245 (302)
Q Consensus 185 ~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i 245 (302)
.+++++.|.+++.|++++.|+++|+|++++.||++|.|++++.|. ++.|+++|.|+++++|
T Consensus 9 ~I~p~A~I~~~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I 70 (305)
T 3t57_A 9 LIHPSAVVHPNAVIGKGVSVGPYCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVLMTGAVV 70 (305)
T ss_dssp CBCTTSEECTTSEECTTCEECTTCEECTTEEECTTCEECTTCEECSSEEECTTCEECTTCEE
T ss_pred eECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCcEEccCcEe
Confidence 344445554444445444444444444444444444444444443 3334444444333333
No 65
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.52 E-value=1.6e-13 Score=122.65 Aligned_cols=13 Identities=8% Similarity=0.112 Sum_probs=6.8
Q ss_pred eeEecCChHHHHH
Q 022113 157 FWMDIGQPRDYIT 169 (302)
Q Consensus 157 ~~~digt~~~~~~ 169 (302)
.+.-+.+|...+.
T Consensus 78 ~~i~~~~p~~~~~ 90 (357)
T 4e79_A 78 NFIIVDNPYLAFA 90 (357)
T ss_dssp EEEECSCHHHHHH
T ss_pred cEEEECCHHHHHH
Confidence 3455566665443
No 66
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.51 E-value=1.9e-13 Score=121.57 Aligned_cols=33 Identities=15% Similarity=0.021 Sum_probs=15.0
Q ss_pred CcEEEEEecCCCCC-CCeEEEEEEEeCHhhHhhc
Q 022113 96 GKVEKFVEKPKLFV-GNKINAGIYLLNPAVLDRI 128 (302)
Q Consensus 96 ~~v~~~~ekp~~~~-~~~~~~Giy~~~~~~l~~l 128 (302)
..-+.|..+|+... .....++..+++++.+..+
T Consensus 36 ~~~i~fl~~~~~~~~~~~~~a~~~i~~~~~~~~~ 69 (341)
T 3eh0_A 36 TGHITFMVNPKYREHLGLCQASAVVMTQDDLPFA 69 (341)
T ss_dssp TTEEEECCCSSGGGGGGGCCCSEEEECTTTGGGC
T ss_pred CCeEEEeCCHHHHHHHhhCCCCEEEECHHHhhhh
Confidence 34455555554321 1112345566666554443
No 67
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.51 E-value=1.6e-13 Score=110.31 Aligned_cols=84 Identities=17% Similarity=0.124 Sum_probs=54.0
Q ss_pred ceEEcCCcEECCCCEECCCcEECCCCEECCCcEEec----eEEccCCEECCCcEEe-----ccEECCCCEECCCcEEccC
Q 022113 195 NVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSR----CTVMRGVRIKKHACIS-----SSIIGWHSTVGQWARVENM 265 (302)
Q Consensus 195 ~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~~----~~i~~~~~i~~~~~i~-----~~~i~~~~~i~~~~~i~~~ 265 (302)
.+.+++++.|++++.|.+++.||++|.|++++.|.. +.|+++|.|++++.|. +++|++++.|++++.| .+
T Consensus 12 ~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i-~~ 90 (173)
T 1xhd_A 12 KPKIASSAFIADYVTITGDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVIL-HS 90 (173)
T ss_dssp CCEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEE-ES
T ss_pred CCEECCCcEECCCCEEECCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEE-eC
Confidence 444566666666666666677777777777777763 6788888888888886 6778887777766654 22
Q ss_pred cEECCCcEECCceE
Q 022113 266 TILGEDVHVCDEIY 279 (302)
Q Consensus 266 ~~i~~~~~v~~~~~ 279 (302)
++||+++.|++++.
T Consensus 91 ~~Ig~~~~Ig~~~~ 104 (173)
T 1xhd_A 91 CHIKKDALIGMGSI 104 (173)
T ss_dssp CEECTTCEECTTCE
T ss_pred CEECCCCEEcCCCE
Confidence 34444444433333
No 68
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=99.51 E-value=1.3e-13 Score=117.57 Aligned_cols=100 Identities=18% Similarity=0.208 Sum_probs=81.3
Q ss_pred ceEEcCCcEECCCCEEC--CCcEECCCCEECCCcEEe----ceEEccCCEECCCcEEecc--------------------
Q 022113 195 NVLVHESAQIGEGCLIG--PDVAVGPGCVVESGVRLS----RCTVMRGVRIKKHACISSS-------------------- 248 (302)
Q Consensus 195 ~~~i~~~~~i~~~~~i~--~~~~ig~~~~i~~~~~i~----~~~i~~~~~i~~~~~i~~~-------------------- 248 (302)
++.|++++.|++++.|. .+++||++|.|++++.|. ++.|+++|.|++++.|.++
T Consensus 85 ~v~Ig~~~~I~~~~~i~~g~~v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~v 164 (252)
T 3jqy_B 85 YVRIHKNSKIKGDIVATKGSKVIIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVILRASDGHPIFDIHSKKRINWAKDI 164 (252)
T ss_dssp EEEECTTCEEEEEEEEESSCEEEECTTCEECTTCEEECSSSEEEECTTCEECSSEEEECSCSSCEEETTTCBBCCCCCCE
T ss_pred eEEECCCCEECCceEEccCCEEEECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEEecCCCcccccccccccccccCCe
Confidence 44566666666666663 367899999999999998 8999999999999999774
Q ss_pred EECCCCEECCCcEEccCcEECCCcEECCceEEc----CCeE---ecCcccccc
Q 022113 249 IIGWHSTVGQWARVENMTILGEDVHVCDEIYSN----GGVV---LPHKEIKSS 294 (302)
Q Consensus 249 ~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~----~~~v---~~~~~~~~~ 294 (302)
+||++|+||+++.|.+++.||++++|+++++|. ++++ .|.+.++.+
T Consensus 165 ~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~~~vp~~~~~~G~Pa~~i~~~ 217 (252)
T 3jqy_B 165 IISSYVWVGRNVSIMKGVSVGSGSVIGYGSIVTKDVPSMCAAAGNPAKIIKRN 217 (252)
T ss_dssp EECSSCEECSSEEECTTCEECTTCEECTTCEECSCBCTTEEEEETTEEEEEES
T ss_pred EEecCcEECCCCEECCCCEECCCCEECCCCEECcccCCCCEEEccCCEEEccC
Confidence 899999999999999999999999999999984 4443 366666654
No 69
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.51 E-value=1.7e-13 Score=118.22 Aligned_cols=75 Identities=9% Similarity=0.285 Sum_probs=54.2
Q ss_pred cEECCCCEECCCcEEe-ceEEccCCEECCCcEEe-ccEECCCCEECCCcEEccCcEECCCcEECCceEEcCCeEecC
Q 022113 214 VAVGPGCVVESGVRLS-RCTVMRGVRIKKHACIS-SSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPH 288 (302)
Q Consensus 214 ~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~~~ 288 (302)
++||++|.|++++.|. ++.|++++.|++++.|. ++.|++++.|+.++.+..++.||+++.|++++.+..++.++.
T Consensus 71 ~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~~~~i~~~~~IG~~~~I~~~~~I~~~~~ig~ 147 (273)
T 3fs8_A 71 LIIGENALIRTENVIYGDTIIGDNFQTGHKVTIRENTKIGNNVKIGTLSDIQHHVYIGNYVNIHSNVFVGEKSIIKD 147 (273)
T ss_dssp EEECTTCEECTTCEEESSCEECTTCEECSSCEECSSCEECSSCEECTTCEECSSCEECSSCEECTTCEECTTCEECT
T ss_pred eEECCCCEECCCCEEeCCCEECCCCEECCceEECCCCEECCCCEECccceeCCceEECCceEECCCCEECCCceeCC
Confidence 4555556666666664 67788888888888884 688888888888887777777777777777777766666554
No 70
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.51 E-value=2.7e-13 Score=116.80 Aligned_cols=29 Identities=28% Similarity=0.405 Sum_probs=14.3
Q ss_pred CcEECCCCEECCCcEECCCCEECCCcEEe
Q 022113 201 SAQIGEGCLIGPDVAVGPGCVVESGVRLS 229 (302)
Q Consensus 201 ~~~i~~~~~i~~~~~ig~~~~i~~~~~i~ 229 (302)
++.||++|.|+++++|++++.||++|.|.
T Consensus 133 ~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~ 161 (276)
T 3gos_A 133 GAFVDEGTMVDTWATVGSCAQIGKNVHLS 161 (276)
T ss_dssp TCEECTTCEECTTEEECTTCEECTTCEEC
T ss_pred CeEECCCCEECCCCEECCCCEECCCCEEC
Confidence 45555555554444444444444444444
No 71
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.50 E-value=2.2e-13 Score=118.59 Aligned_cols=91 Identities=18% Similarity=0.160 Sum_probs=45.6
Q ss_pred EEcCCcEECCCCEECCCcEECCCCEECCCcEEec---------------eEEccCCEECCCcEE-eccEECCCCEECCCc
Q 022113 197 LVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSR---------------CTVMRGVRIKKHACI-SSSIIGWHSTVGQWA 260 (302)
Q Consensus 197 ~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~~---------------~~i~~~~~i~~~~~i-~~~~i~~~~~i~~~~ 260 (302)
++++++.||++|.|.++++||++|.||++|.|.. ++|+++|.||++|.| .+++||++|+|++++
T Consensus 154 ~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~~avIgags 233 (304)
T 3eg4_A 154 FVNLGAYVDKGAMIDTWATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVEGCIVREGSVLGMGV 233 (304)
T ss_dssp EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTCCCCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred EECCCCEECCCcEEcCCcEECCCCccCCCcEECCCCEECCccccCccCCeEEcCCCEECCCCEEcCCcEECCCcEECCCC
Confidence 3344556666665555555555555555555542 444444444444444 234455555555555
Q ss_pred EEccCcEECCCc-------EECCceEEcCCeEec
Q 022113 261 RVENMTILGEDV-------HVCDEIYSNGGVVLP 287 (302)
Q Consensus 261 ~i~~~~~i~~~~-------~v~~~~~v~~~~v~~ 287 (302)
.|.+++.|++++ .|++++++.+++++.
T Consensus 234 vV~~g~~Igd~~~g~~~~~~Ip~~svV~~Gs~v~ 267 (304)
T 3eg4_A 234 FIGKSTKIVDRATGEVFYGEVPPYSVVVAGTMPG 267 (304)
T ss_dssp EECTTCCEEETTTCCEECSEECTTEEEEEEEEEC
T ss_pred EEcCCeEECccceeeeccCEeCCCCEEecCcEec
Confidence 554444444443 355555555555443
No 72
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=99.49 E-value=2.7e-14 Score=126.81 Aligned_cols=150 Identities=20% Similarity=0.236 Sum_probs=106.5
Q ss_pred EecCCCCCChHHHHHcHhhhcc-CCCCcEEEEeCCeecCc--CHHHHHHH----HHHcCCcEEEEEEeCCCCCCcceEEE
Q 022113 19 SQETEPLGTAGPLALARDKLID-DTGEPFFVLNSDVISEY--PFAEMIEF----HKAHGGEASIMVTKVDEPSKYGVVVM 91 (302)
Q Consensus 19 ~~~~~~~Gt~~al~~a~~~i~~-~~~~~~lv~~gD~l~~~--~l~~~~~~----~~~~~~~~~l~~~~~~~~~~~g~v~~ 91 (302)
+.|+.++||++++..++. +.. +.++.+++++||+++.. +|.++++. |.+ ++.+|+.+.+..++..||++..
T Consensus 76 i~e~~~~gta~ai~~a~~-l~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~-~~~vt~~i~p~~~~t~yG~I~~ 153 (337)
T 2cu2_A 76 LLEPLGRDTAGAVLLGVA-EALKEGAERLLVLPADHYVGDDEAYREALATMLEAAEE-GFVVALGLRPTRPETEYGYIRL 153 (337)
T ss_dssp EEESSCCHHHHHHHHHHH-HHHHHTCSEEEEEESSCEESCHHHHHHHHHHHHHHCCT-TCEEEEEECCSSCCSSSCEEEE
T ss_pred EecCCCCCcHHHHHHHHH-HhccCCCCEEEEEECCccCCCHHHHHHHHHHHHHHHHc-CCeEEEeeccCCCCCCceEEEE
Confidence 567788999999999987 521 11368999999997642 35554443 333 5678888888777789999988
Q ss_pred eCCC----CcEEEEEecCCCCC------C-CeEEEEEEEeCHhhH-hhccCCCCCc------------cccchHH-----
Q 022113 92 EEST----GKVEKFVEKPKLFV------G-NKINAGIYLLNPAVL-DRIELRPTSI------------EKEVFPK----- 142 (302)
Q Consensus 92 d~~~----~~v~~~~ekp~~~~------~-~~~~~Giy~~~~~~l-~~l~~~~~~~------------~~~~~~~----- 142 (302)
++ + +++..|.|||.... . .++++|+|+|+++.| +.++...+.. ..+.|..
T Consensus 154 ~~-~~~~~~~V~~f~EKp~~~~a~~~~~~g~~~n~Giy~f~~~~ll~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~s 232 (337)
T 2cu2_A 154 GP-REGAWYRGEGFVEKPSYAEALEYIRKGYVWNGGVFAFAPATMAELFRRHLPSHHEALERLLAGASLEEVYAGLPKIS 232 (337)
T ss_dssp EE-EETTEEEEEEEECCCCHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHCHHHHHHHHHHHTTCCHHHHHHTSCCCC
T ss_pred CC-cccccCeEEEEEeCCChHHHHHHhhcCCEEEEEEEEEeHHHHHHHHHHHCHHHHHHHHHHhcCCcHHHHHhhCccch
Confidence 74 4 78999999996421 1 689999999999877 5543111100 0122322
Q ss_pred ----HH-hcCcEEEEEecCeeEecCChHHHHHHH
Q 022113 143 ----IA-LEGKLFAMVLPGFWMDIGQPRDYITGL 171 (302)
Q Consensus 143 ----l~-~~~~v~~~~~~g~~~digt~~~~~~a~ 171 (302)
+. +..++.+++++++|.|+|++++|+++.
T Consensus 233 idy~vme~~~~v~v~~~~~~W~DvGt~~~l~~~~ 266 (337)
T 2cu2_A 233 IDYGVMEKAERVRVVLGRFPWDDVGNWRALERVF 266 (337)
T ss_dssp HHHHTGGGCSSEEEEEECSCEECCCSTTHHHHHH
T ss_pred HHHHHhhCCCcEEEEEeCCcEEcCCCHHHHHHHh
Confidence 23 346899999999999999999998873
No 73
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=99.49 E-value=1.4e-13 Score=125.23 Aligned_cols=85 Identities=21% Similarity=0.269 Sum_probs=63.1
Q ss_pred hccccccc----cccCceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcEEe-ceEEccCCEECCCcEEeccEECC
Q 022113 178 LRKKSSLK----LATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLS-RCTVMRGVRIKKHACISSSIIGW 252 (302)
Q Consensus 178 ~~~~~~~~----~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~~~i~~ 252 (302)
........ +++++.+.+++.+++++.|++++.|.+++.||++|.|++++.|. +++|+++|.|++++.|++++|++
T Consensus 223 ~~~~~~~~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~ 302 (401)
T 2ggo_A 223 LDNLVFSQNLGNVEDNVKIKGKVIIEEDAEIKSGTYIEGPVYIGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIME 302 (401)
T ss_dssp HHHTCCCEECSEECSSCEEESCEEECTTCEECTTCEEESSEEECTTCEECSSCEECTTEEECSSCEEEETCEEESEEECT
T ss_pred HHhcccccccceeCCCCEEcCCeEEcCCCEECCCCEEeCCeEECCCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcC
Confidence 34688553 56777777888888888888888887788888888888888776 67788888888888777777777
Q ss_pred CCEECCCcEE
Q 022113 253 HSTVGQWARV 262 (302)
Q Consensus 253 ~~~i~~~~~i 262 (302)
++.|++++.+
T Consensus 303 ~~~i~~~~~i 312 (401)
T 2ggo_A 303 GSKIPHLSYV 312 (401)
T ss_dssp TCEEEESCEE
T ss_pred CcEECCCceE
Confidence 7766555444
No 74
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.49 E-value=2.6e-13 Score=111.04 Aligned_cols=97 Identities=21% Similarity=0.227 Sum_probs=59.8
Q ss_pred ecceEEcCCcEECCCCEECCCcEECCCCEECCCcEEe----ceEEccCCEECCCcEEe-----------------ccEEC
Q 022113 193 VGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLS----RCTVMRGVRIKKHACIS-----------------SSIIG 251 (302)
Q Consensus 193 ~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~----~~~i~~~~~i~~~~~i~-----------------~~~i~ 251 (302)
++++.|+|++.|+++|.|+++++||++|.|++++.|. +..|+++|.|+++++|. .++|+
T Consensus 10 ~~~v~I~~~a~I~~~a~I~g~V~IG~~~~I~~~~~I~~~~g~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~~~Ig 89 (194)
T 3tv0_A 10 QKSVKIAPGAVVCVESEIRGDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINAYPDNITPDTEDPEPKPMIIG 89 (194)
T ss_dssp --CEEECTTCEECTTSEEESSEEECTTCEECTTCEEEESSSCEEECTTCEECTTCEEEECCCSCC---------CCEEEC
T ss_pred CCCCEECCCCEEcCCCEEeCCCEECCCCEECCCCEEccCCCCeEECCCccccCCcccccccccccccccccCcCCceEEC
Confidence 3455555666666666666666666666666666663 35677777777777663 24566
Q ss_pred CCCEEC-----------CCcEEccCcEECCCcEECCceEEcCCeEecCc
Q 022113 252 WHSTVG-----------QWARVENMTILGEDVHVCDEIYSNGGVVLPHK 289 (302)
Q Consensus 252 ~~~~i~-----------~~~~i~~~~~i~~~~~v~~~~~v~~~~v~~~~ 289 (302)
++++|+ ++++|+.+++|+++++||++++|+++++|...
T Consensus 90 ~~~~i~~~~~i~~~~Ig~~~~Ig~~~~I~~gv~IG~~~~IgagsvV~~~ 138 (194)
T 3tv0_A 90 TNNVFEVGCYSQAMKMGDNNVIESKAYVGRNVILTSGCIIGACCNLNTF 138 (194)
T ss_dssp SSCEECTTCEECCSEECSSCEECTTCEECTTEEECSSCEECTTCEECCC
T ss_pred CcceEecceeEeeeeecccceecceeeECCeEEECCCCEECCCCEECCC
Confidence 655544 55566666777777777777777777766543
No 75
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.48 E-value=2.3e-13 Score=112.32 Aligned_cols=105 Identities=13% Similarity=0.148 Sum_probs=59.7
Q ss_pred cccccCceEecceEEcC--CcEECCCCEECCCcEECCCCEECCCcEEe-ceEEccC---CEECCCcEEec-cEE------
Q 022113 184 LKLATGANIVGNVLVHE--SAQIGEGCLIGPDVAVGPGCVVESGVRLS-RCTVMRG---VRIKKHACISS-SII------ 250 (302)
Q Consensus 184 ~~~~~~~~i~~~~~i~~--~~~i~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~---~~i~~~~~i~~-~~i------ 250 (302)
..+.+++.|++++.+.. ++.||++|.|+++++|++++.||++|.|. ++.|..+ +.||++|.|+. ++|
T Consensus 33 ~~ig~~~~I~~~~~i~~~~~v~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~ 112 (205)
T 3vbi_A 33 LSVGKNVLISKKASIYNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIVYAAIDD 112 (205)
T ss_dssp SEECSSEEEBTTSEEESGGGEEECSSEEECTTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEEESEECC
T ss_pred eEECCCCEECCCeEEccCCeeEECCCCEECCCCEEccceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEEEeCCCC
Confidence 44556666666666555 55566666666666665555555555555 3444322 55555555543 444
Q ss_pred -------------------CCCCEECCCcEEccCcEECCCcEECCceEEcCCeEecC
Q 022113 251 -------------------GWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPH 288 (302)
Q Consensus 251 -------------------~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~~~ 288 (302)
..++.||++++|+.+++|.++++|+++++|++++++..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~Ig~~~~Ig~gsvV~~ 169 (205)
T 3vbi_A 113 FSGNALMGPTIPNQYKNVKTGKVILKKHVIIGAHSIIFPNVVIGEGVAVGAMSMVKE 169 (205)
T ss_dssp CSSSSCCSTTSCGGGCCCEECCEEECTTCEECTTCEECSSCEECTTCEECTTCEECS
T ss_pred cccccccCcccccccceeccCCEEECCCCEECCCCEEcCCCEECCCCEEcCCCEECC
Confidence 34555666666666666666666666666666666543
No 76
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.48 E-value=6.7e-13 Score=116.23 Aligned_cols=16 Identities=25% Similarity=0.692 Sum_probs=6.5
Q ss_pred CcEECCCCEECCCcEE
Q 022113 213 DVAVGPGCVVESGVRL 228 (302)
Q Consensus 213 ~~~ig~~~~i~~~~~i 228 (302)
++.||++|.|++++.|
T Consensus 55 ~~~IG~~~~I~~~a~I 70 (305)
T 3t57_A 55 NTELGESCVLMTGAVV 70 (305)
T ss_dssp SEEECTTCEECTTCEE
T ss_pred CcEECCCcEEccCcEe
Confidence 3334444444444433
No 77
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=99.47 E-value=4.1e-13 Score=111.72 Aligned_cols=87 Identities=11% Similarity=0.105 Sum_probs=71.3
Q ss_pred eEEcCCcEECCCCEECC---CcEECCCCEECCCcEE----eceEEccCCEECCCcEEecc--------------------
Q 022113 196 VLVHESAQIGEGCLIGP---DVAVGPGCVVESGVRL----SRCTVMRGVRIKKHACISSS-------------------- 248 (302)
Q Consensus 196 ~~i~~~~~i~~~~~i~~---~~~ig~~~~i~~~~~i----~~~~i~~~~~i~~~~~i~~~-------------------- 248 (302)
+.|++++.|++++.|.. ++.||++|.|++.+.+ .+++|+++|.|+++++|.++
T Consensus 59 v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~I~~~~~h~~~~~~~~~~~~~~~~v 138 (215)
T 2wlg_A 59 LFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYEIRNTDMHPIYSLENGERINHGKDV 138 (215)
T ss_dssp EEECTTCEEESEEEEECTTCEEEECTTCEECSEEEEECTTCEEEECTTCEECTTEEEESCCSSCEEETTTCBBCCCCCCE
T ss_pred EEECCCCEECCCeEEEcCCceEEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEEEECCCCcccccccccccccCCCCe
Confidence 66666666666666642 3888999999885555 57899999999999999763
Q ss_pred EECCCCEECCCcEEccCcEECCCcEECCceEEcC
Q 022113 249 IIGWHSTVGQWARVENMTILGEDVHVCDEIYSNG 282 (302)
Q Consensus 249 ~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~ 282 (302)
+||++++||+++.|.+++.||+++.|++++++..
T Consensus 139 ~Igd~v~IG~~~~I~~gv~Ig~~~vIgagsvV~~ 172 (215)
T 2wlg_A 139 IIGNHVWLGRNVTILKGVCIPNNVVVGSHTVLYK 172 (215)
T ss_dssp EECTTCEECTTCEECTTCEECSSCEECTTCEECS
T ss_pred EECCCcEECCCCEECCCCEECCCCEECCCCEEcC
Confidence 8999999999999999999999999999988754
No 78
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.46 E-value=2.5e-13 Score=110.44 Aligned_cols=43 Identities=12% Similarity=0.100 Sum_probs=18.4
Q ss_pred EECCCCEECCCcEECCCCEECCCcEEe----ceEEccCCEECCCcEE
Q 022113 203 QIGEGCLIGPDVAVGPGCVVESGVRLS----RCTVMRGVRIKKHACI 245 (302)
Q Consensus 203 ~i~~~~~i~~~~~ig~~~~i~~~~~i~----~~~i~~~~~i~~~~~i 245 (302)
.|++++.|.+++.||++|.|++++.|. ++.|+++|.|++++.|
T Consensus 23 ~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I 69 (187)
T 3r3r_A 23 MIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVL 69 (187)
T ss_dssp EECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEE
T ss_pred EECCCCEEECceEECCCCEECCCcEEEcCCccEEECCCCEECCCCEE
Confidence 333333333334444444444444443 1245555555555555
No 79
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=99.46 E-value=1.2e-13 Score=120.03 Aligned_cols=89 Identities=20% Similarity=0.265 Sum_probs=56.8
Q ss_pred ceEEcCCcEECCCCEE--CCCcEECCCCEECCCcEEe-ceEEccCCEECCCcEEe-----ccEECCCCEECCCcEEccCc
Q 022113 195 NVLVHESAQIGEGCLI--GPDVAVGPGCVVESGVRLS-RCTVMRGVRIKKHACIS-----SSIIGWHSTVGQWARVENMT 266 (302)
Q Consensus 195 ~~~i~~~~~i~~~~~i--~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~-----~~~i~~~~~i~~~~~i~~~~ 266 (302)
++.|++++.||+++.| +.+++||++|.||++|.|. ++.|++++.+++++.+. +++||++|+||++++|.+++
T Consensus 163 gv~I~p~a~IG~~v~I~~g~gvvIG~~~~IG~~v~I~~~vtIG~~~~ig~~~~i~~~~~~~~~IGd~v~IGaga~Ilggv 242 (313)
T 3q1x_A 163 SIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVLGNI 242 (313)
T ss_dssp CCEECTTCEECSSCEESSCTTCEECTTCEECSSCEECTTCEEECCCCCCTTCCCCCCSSCSCEECSSCEECTTCEEESSC
T ss_pred CeEECCCCEECCCEEECCCCceEECCCcEECCCCEECCCcEEeCCcEECCCceEcCCCccCCEECCCCEECCCCEECCCc
Confidence 3334444444444444 3344444444444444444 34455555555555543 45999999999999999999
Q ss_pred EECCCcEECCceEEcCC
Q 022113 267 ILGEDVHVCDEIYSNGG 283 (302)
Q Consensus 267 ~i~~~~~v~~~~~v~~~ 283 (302)
+||++|.||++++|..+
T Consensus 243 ~IG~~a~IGagsvV~~d 259 (313)
T 3q1x_A 243 IVGSHVRIGANCWIDRD 259 (313)
T ss_dssp EECSSEEECTTCEECSC
T ss_pred EECCCCEECCCCEECCC
Confidence 99999999999997654
No 80
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=99.45 E-value=4.6e-13 Score=123.70 Aligned_cols=22 Identities=18% Similarity=-0.001 Sum_probs=13.4
Q ss_pred EEecCCCCCChHHHHHcHhhhc
Q 022113 18 CSQETEPLGTAGPLALARDKLI 39 (302)
Q Consensus 18 ~~~~~~~~Gt~~al~~a~~~i~ 39 (302)
...-+.|+=+...+...++...
T Consensus 101 v~~~D~P~i~~~~i~~l~~~~~ 122 (456)
T 2v0h_A 101 VLYGDAPLITKETLEKLIEAKP 122 (456)
T ss_dssp EEETTCTTCCHHHHHHHHHHCC
T ss_pred EEcCCcceeCHHHHHHHHHHHh
Confidence 3333556666777777776653
No 81
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=99.45 E-value=3.9e-13 Score=119.24 Aligned_cols=130 Identities=17% Similarity=0.082 Sum_probs=87.6
Q ss_pred ecCeeEecCC--hHHHHHHHHHHHHhhc---c-------cccccc--ccCceEecceEEcCCcEECCCCEECCC-cEECC
Q 022113 154 LPGFWMDIGQ--PRDYITGLRLYLDSLR---K-------KSSLKL--ATGANIVGNVLVHESAQIGEGCLIGPD-VAVGP 218 (302)
Q Consensus 154 ~~g~~~digt--~~~~~~a~~~~l~~~~---~-------~~~~~~--~~~~~i~~~~~i~~~~~i~~~~~i~~~-~~ig~ 218 (302)
...+|.|.|+ |+.+......+...-+ . .....+ .+++.|.+++.|++++.||+++.|+++ ++|+.
T Consensus 168 ~~~~Wt~~G~~~~~~f~~~~~~l~~~G~~~~~~~~dk~p~~~~~v~p~~gv~I~p~a~I~~~a~IG~gv~Ig~g~a~Ig~ 247 (387)
T 2rij_A 168 SNVAWSDDKPIELEYLRANEMRLKMSNQYPKIDFVDKFPRFLAHIIPEDNTRILESSKVRMGASLAAGTTIMPGASYVNF 247 (387)
T ss_dssp CCEEEETTEEECHHHHHHHHHHHHHTTCCCCCCEEESSCBGGGTCCCCTTCEESCGGGBBTTCBCCTTCEECSSSCEECT
T ss_pred ceeeeccCcccCHHHHHHHHHHHHhcCCccceeecccccchhccccCCCCEEEcCCCEECCCeEEcCCCEEeCCeeEECC
Confidence 4568999888 6777666554442110 0 000001 125566666666666666666666664 66666
Q ss_pred CCE-ECCCcEE----e-ceEEccCCEECCCcEEe----c-----cEECCCCEECCCcEEccCcEECCCcEECCceEEcCC
Q 022113 219 GCV-VESGVRL----S-RCTVMRGVRIKKHACIS----S-----SIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGG 283 (302)
Q Consensus 219 ~~~-i~~~~~i----~-~~~i~~~~~i~~~~~i~----~-----~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~ 283 (302)
++. ||+ |.| . +++|+++|.|++++.|. + ++||++|+||+++. +++.||++|.|+++++|..+
T Consensus 248 nv~vIG~-~~I~~~Ig~~vvIGdnv~Ig~ga~I~g~l~g~~~~~VvIGdnv~IGagAv--~GV~IGdgavIGAGsVVt~d 324 (387)
T 2rij_A 248 NAGTTGA-CMVEGRISSSAIVGEGSDVGGGASILGVLSGTSGNAISVGKACLLGANSV--TGIPLGDNCIVDAGIAVLEG 324 (387)
T ss_dssp TCEESSC-CEECSEECTTCEECTTCEECTTCEECCBCSSTTCCBCEECTTCEECTTCE--ECSCBCTTCEECTTCEECTT
T ss_pred CcEEECC-EEEeeEECCCCEECCCCEECCCceEcceecCCCccCeEEeCCCEECCCCc--CCcEECCCCEECCCCEECCC
Confidence 666 665 554 3 57788888888888642 2 78999999999998 78999999999999999888
Q ss_pred eEe
Q 022113 284 VVL 286 (302)
Q Consensus 284 ~v~ 286 (302)
+.+
T Consensus 325 v~i 327 (387)
T 2rij_A 325 TKF 327 (387)
T ss_dssp CEE
T ss_pred cee
Confidence 854
No 82
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=99.45 E-value=5.6e-13 Score=123.25 Aligned_cols=61 Identities=18% Similarity=0.397 Sum_probs=32.2
Q ss_pred cccccCceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcEEeceEEccCCEECCCcEE
Q 022113 184 LKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACI 245 (302)
Q Consensus 184 ~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i 245 (302)
+.+++++.|.+++.||+++.|+++|.|. ++.||++|.|++++.|.++.|+++|.|++++.|
T Consensus 275 ~~i~~~~~i~~~~~ig~~~~I~~~~~i~-~~~Ig~~~~I~~~~~i~~~~Ig~~~~ig~~~~i 335 (459)
T 4fce_A 275 ITIDTNVIIEGHVILGDRVRIGTGCVLK-NCVIGDDSEISPYTVLEDARLDANCTVGPFARL 335 (459)
T ss_dssp CEECTTEEEEEEEEECTTCEECTTCEEE-SCEECTTCEECSSCEEESCEECTTCEECSSEEE
T ss_pred cEECCCeeeccceEECCCCEECCCCEEe-ccEECCCCEECCCcEEeCCEECCCCEECCccEE
Confidence 3455555555555555555555555554 355555555555555554445554444444444
No 83
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.44 E-value=7.1e-13 Score=107.92 Aligned_cols=65 Identities=20% Similarity=0.276 Sum_probs=35.6
Q ss_pred EcCCcEECCCCEECCCcEECCCCEECCCcEEe----ceEEccCCEECCCcEEecc------------EECCCCEECCCcE
Q 022113 198 VHESAQIGEGCLIGPDVAVGPGCVVESGVRLS----RCTVMRGVRIKKHACISSS------------IIGWHSTVGQWAR 261 (302)
Q Consensus 198 i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~----~~~i~~~~~i~~~~~i~~~------------~i~~~~~i~~~~~ 261 (302)
+++++.|++++.|.+++.||++|.|++++.|. ++.|+++|.|++++.|..+ +||++++|++++.
T Consensus 22 ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~ 101 (189)
T 3r1w_A 22 LGERVFVDRSSVIIGDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDDVTIGHQAM 101 (189)
T ss_dssp ECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEECSSEEECTTCE
T ss_pred ECCCcEECCCCEEeeeeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEECCCCEECCCCE
Confidence 44444444444444555555555555555553 2366666666666666443 6666665555554
Q ss_pred E
Q 022113 262 V 262 (302)
Q Consensus 262 i 262 (302)
|
T Consensus 102 i 102 (189)
T 3r1w_A 102 L 102 (189)
T ss_dssp E
T ss_pred E
Confidence 4
No 84
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=99.44 E-value=1.9e-12 Score=110.30 Aligned_cols=160 Identities=17% Similarity=0.145 Sum_probs=115.9
Q ss_pred hcCCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCe-ec-CcCHHHHHHHHHHc-CCcEEEEEEeCC-----
Q 022113 10 AKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDV-IS-EYPFAEMIEFHKAH-GGEASIMVTKVD----- 81 (302)
Q Consensus 10 ~~~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~-l~-~~~l~~~~~~~~~~-~~~~~l~~~~~~----- 81 (302)
+.+|.++.+..++.+.||++ ++.++..+.....+.++++.||. +. +..+.++++.|.++ +.++++++.+..
T Consensus 66 ~~~g~~v~~~~~~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~ 144 (256)
T 3tqd_A 66 EDFGAVVCMTSSDHQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITEVDEL 144 (256)
T ss_dssp HHTTCEEEECCTTCCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECCCHHHH
T ss_pred HHcCCeEEEeCCCCCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHHh
Confidence 35789998888888899987 78888877421237899999999 44 55699999999775 456777777763
Q ss_pred -CCCCcceEEEeCCCCcEEEEEecCC-CC-------------CCCeEEEEEEEeCHhhHhhccCCCCC-ccc----cchH
Q 022113 82 -EPSKYGVVVMEESTGKVEKFVEKPK-LF-------------VGNKINAGIYLLNPAVLDRIELRPTS-IEK----EVFP 141 (302)
Q Consensus 82 -~~~~~g~v~~d~~~~~v~~~~ekp~-~~-------------~~~~~~~Giy~~~~~~l~~l~~~~~~-~~~----~~~~ 141 (302)
+|..++ +.+|+ +|+++.|.++|. .+ .+.+.+.|+|.|++++|+.+.....+ ++. +.+.
T Consensus 145 ~~p~~vk-vv~d~-~g~~l~fsr~pip~~r~~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~l~~s~lE~~e~leqlr 222 (256)
T 3tqd_A 145 FNPHSTK-VVLNR-RNYALYFSHAPIPWGRDTFSDKENLQLNGSHYRHVGIYAYRVGFLEEYLSWDACPAEKMEALEQLR 222 (256)
T ss_dssp TCTTSCE-EEECT-TSBEEEEESSCSSCCTTTTTCGGGCCCSSCCEEEEEEEEEEHHHHHHHHHSCCCHHHHHHTCTTHH
T ss_pred hCCCccE-EEECC-CCEEeEEecCCCCCCCcccccccccccCCcceEEEEEEEcCHHHHHHHHhCCCCcccchhhhHHHH
Confidence 344444 45775 899999999874 11 14689999999999999877533222 111 2234
Q ss_pred HHHhcCcEEEEEecCe-eEecCChHHHHHHHH
Q 022113 142 KIALEGKLFAMVLPGF-WMDIGQPRDYITGLR 172 (302)
Q Consensus 142 ~l~~~~~v~~~~~~g~-~~digt~~~~~~a~~ 172 (302)
.+....++.++..+++ |.+|+||+||.++.+
T Consensus 223 ~le~G~~i~~~~~~~~~~~~idtpeDl~~a~~ 254 (256)
T 3tqd_A 223 ILWHGGRIHMVVAKSKCPPGVDTEEDLERVRA 254 (256)
T ss_dssp HHHTTCCCEEEECSSCCCCCCSSHHHHHHHHT
T ss_pred HHHCCCeEEEEEeCCCCCCCcCCHHHHHHHHH
Confidence 4556678999988875 899999999988753
No 85
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.44 E-value=9.5e-13 Score=109.31 Aligned_cols=67 Identities=10% Similarity=0.027 Sum_probs=43.6
Q ss_pred cEECCCCEECCCcEEec-eEEccCCEECCCcEEeccEECCCCEECCCcEEccCcEECCCcEECCceEEc
Q 022113 214 VAVGPGCVVESGVRLSR-CTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSN 281 (302)
Q Consensus 214 ~~ig~~~~i~~~~~i~~-~~i~~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~ 281 (302)
++||++|.|++++.|.. +.|+++|.||.++.|.+++|+++++|++++.+ .+++|++++.|++++++.
T Consensus 112 ~~IG~~v~Ig~~~~I~~~v~Ig~~v~IG~~a~I~~~~Ig~~~~Igags~V-~~~~i~~~~~v~~~~vv~ 179 (213)
T 3kwd_A 112 VWIGDNVSITHMALIHGPAYIGDGCFIGFRSTVFNARVGAGCVVMMHVLI-QDVEIPPGKYVPSGMVIT 179 (213)
T ss_dssp EEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCEE-ESCEECTTBEECTTCEEC
T ss_pred eEECCCcEECCCcEEcCCCEECCCCEECCCCEEeCcEECCCCEEcCCCEE-CCcEeCCCCEECCCcEEc
Confidence 55666666666666664 67777777777777766667777777777666 455666666665555554
No 86
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.43 E-value=1.1e-12 Score=105.42 Aligned_cols=15 Identities=13% Similarity=0.122 Sum_probs=6.3
Q ss_pred eEEccCCEECCCcEE
Q 022113 231 CTVMRGVRIKKHACI 245 (302)
Q Consensus 231 ~~i~~~~~i~~~~~i 245 (302)
+.|+++|.|++++.|
T Consensus 50 ~~IG~~~~I~~~~~I 64 (173)
T 1v3w_A 50 IYVGKYSNVQDNVSI 64 (173)
T ss_dssp EEECTTCEECTTCEE
T ss_pred EEECCCCEECCCcEE
Confidence 334444444444444
No 87
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=99.43 E-value=8.1e-13 Score=108.16 Aligned_cols=37 Identities=14% Similarity=0.084 Sum_probs=31.6
Q ss_pred ccEECCCCEECCCcEEccCcEECCCcEECCceEEcCC
Q 022113 247 SSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGG 283 (302)
Q Consensus 247 ~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~ 283 (302)
+++||++|+||+++.|.+++.||+++.|+++++|..+
T Consensus 132 ~v~IG~~v~IG~~~~I~~gv~IG~~~vIgagsvV~~d 168 (195)
T 3nz2_A 132 PIVIEDDVWIGGNVVINQGVTIGARSVVAANSVVNQD 168 (195)
T ss_dssp CEEECTTCEECTTCEECTTCEECTTCEECTTCEECSC
T ss_pred CeEECCCCEEcCCCEECCCCEECCCCEECCCCEEccc
Confidence 4689999999999999999999999999999886543
No 88
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=99.43 E-value=2.2e-12 Score=104.89 Aligned_cols=52 Identities=15% Similarity=0.122 Sum_probs=41.5
Q ss_pred EEccCCEECCCcEE-------------------eccEECCCCEECCCcEEccCcEECCCcEECCceEEcCC
Q 022113 232 TVMRGVRIKKHACI-------------------SSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGG 283 (302)
Q Consensus 232 ~i~~~~~i~~~~~i-------------------~~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~ 283 (302)
.||++|.|+++++| ..++||++|+||+++.|.++++||+++.|+++++|..+
T Consensus 98 ~IG~~~~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~~~vIgagsvV~~d 168 (188)
T 3srt_A 98 EIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGITIGDNVVIGAGSVVTKD 168 (188)
T ss_dssp EECSSCEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSCEECTTCEECTTCEECSSEEECTTCEECSC
T ss_pred EECCeeEECCCcEEeeCCccCchhhccccceECCCcEECCCcEEcCCCEECCCcEECCCCEECCCCEECcc
Confidence 56777777777776 35788999999999988888888888888888887654
No 89
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.43 E-value=9.6e-13 Score=112.67 Aligned_cols=163 Identities=13% Similarity=0.056 Sum_probs=118.7
Q ss_pred hhcCCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCe-e-cCcCHHHHHHHHHHcCCcEEEEEEeCCCCCCc
Q 022113 9 EAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDV-I-SEYPFAEMIEFHKAHGGEASIMVTKVDEPSKY 86 (302)
Q Consensus 9 ~~~~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~-l-~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~ 86 (302)
-+.+|.++.+..++.+.||++ +..++..+.....+.++++.||. + .+..+.++++.|.+.++++++++.+..++..|
T Consensus 74 ~~~~g~~v~~~~~~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v~d~~~~ 152 (264)
T 3k8d_A 74 VEAAGGEVCMTRADHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEA 152 (264)
T ss_dssp HHHTTCEEEECCTTCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEECCSHHHH
T ss_pred HHHcCCEEEEecCCCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEcCCHHHc
Confidence 345788888877888899987 78888777421237899999999 3 45669999999988788899999988765433
Q ss_pred c-----eEEEeCCCCcEEEEEecCCC-C------------CCCeEEEEEEEeCHhhHhhccCCCCC-cc----ccchHHH
Q 022113 87 G-----VVVMEESTGKVEKFVEKPKL-F------------VGNKINAGIYLLNPAVLDRIELRPTS-IE----KEVFPKI 143 (302)
Q Consensus 87 g-----~v~~d~~~~~v~~~~ekp~~-~------------~~~~~~~Giy~~~~~~l~~l~~~~~~-~~----~~~~~~l 143 (302)
+ -+.+|+ +|+++.|.++|.- + ...+.++|+|+|++++|+.+.....+ ++ -+.+..+
T Consensus 153 ~~p~~vkVv~d~-~g~~l~fsr~~ip~~r~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~~~~~~lE~~e~leqlr~l 231 (264)
T 3k8d_A 153 FNPNAVKVVLDA-EGYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVL 231 (264)
T ss_dssp TCTTSCEEEECT-TSBEEEEESSCCSCCHHHHHHCSSCCCSCCEEECSEEEEEHHHHHHHHHSCCCHHHHHHTCTTHHHH
T ss_pred cCCCceEEEECC-CCeEEEEecCCCCCCCccccccccccCCcceEEEEEEEECHHHHHHHHhCCCChhhhHHHHHHHHHH
Confidence 2 245675 8999999999741 1 24689999999999999876432222 11 1223444
Q ss_pred HhcCcEEEEEe-cCeeEecCChHHHHHHHHH
Q 022113 144 ALEGKLFAMVL-PGFWMDIGQPRDYITGLRL 173 (302)
Q Consensus 144 ~~~~~v~~~~~-~g~~~digt~~~~~~a~~~ 173 (302)
.+..++.++.. ..+|.+|+||+++..+...
T Consensus 232 e~G~~I~~~~~~~~~~~~IdtpeDl~~a~~~ 262 (264)
T 3k8d_A 232 WYGEKIHVAVAQEVPGTGVDTPEDLERVRAE 262 (264)
T ss_dssp HTTCCEEEEECSCCCSCCCCSHHHHHHHHHH
T ss_pred HCCCceEEEEeCCCCCCCCCCHHHHHHHHHH
Confidence 55668888765 4468999999999988653
No 90
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=99.43 E-value=2e-12 Score=105.45 Aligned_cols=36 Identities=17% Similarity=0.148 Sum_probs=30.7
Q ss_pred cEECCCCEECCCcEEccCcEECCCcEECCceEEcCC
Q 022113 248 SIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGG 283 (302)
Q Consensus 248 ~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~ 283 (302)
++||++|+||+++.|.+++.||++|+|+++++|..+
T Consensus 135 v~IG~~v~IG~~~~I~~gv~IG~~~vIgagsvV~~d 170 (190)
T 3hjj_A 135 VKIGNNVWVGGGAIINPGVSIGDNAVIASGAVVTKD 170 (190)
T ss_dssp EEECTTCEECTTCEECTTCEECTTCEECTTCEECSC
T ss_pred eEECCCCEECCCCEECCCCEECCCCEECCCCEECcc
Confidence 678999999999999888999999999998887543
No 91
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.42 E-value=2.8e-12 Score=111.12 Aligned_cols=69 Identities=14% Similarity=0.042 Sum_probs=36.6
Q ss_pred CCCCEECCCcEEec--------eEEccCCEECCCcEE-eccEECCCCEECCCcEEccCcEECCCcEECCceEEcCCeE
Q 022113 217 GPGCVVESGVRLSR--------CTVMRGVRIKKHACI-SSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVV 285 (302)
Q Consensus 217 g~~~~i~~~~~i~~--------~~i~~~~~i~~~~~i-~~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v 285 (302)
|++|.|++++.|.+ +.|+++|.|++++.| .+++|+++++|+.++.+..++.||+++.||.+++|.+++.
T Consensus 104 G~~~~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~v~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~ 181 (283)
T 4eqy_A 104 GDRNTIREFTTIHTGTVQDAGVTTLGDDNWIMAYVHIGHDCRVGSHVVLSSNAQMAGHVEIGDWAIVGGMSGVHQYVR 181 (283)
T ss_dssp CSSCEECTTEEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCE
T ss_pred CCCcccCcceeEccceecCCCceEECCCcEECceeEEcCCcEECCCcEECCCceEcCCcEECCCeEEecCCEEcCCeE
Confidence 44444444444442 556666666666655 3455555555555555555555555555555555444443
No 92
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=99.42 E-value=3.6e-12 Score=116.87 Aligned_cols=168 Identities=14% Similarity=0.126 Sum_probs=115.3
Q ss_pred hhHHHHHhhcCCcEEEEEec------------------------CCCCCChHHHHHc-----HhhhccCCCCcEEEEeCC
Q 022113 2 LNFLKEFEAKLGIKIICSQE------------------------TEPLGTAGPLALA-----RDKLIDDTGEPFFVLNSD 52 (302)
Q Consensus 2 ~~~~~~~~~~~g~~i~~~~~------------------------~~~~Gt~~al~~a-----~~~i~~~~~~~~lv~~gD 52 (302)
++|+++ .+.+|++|.|+.| ..|+|||++++.+ ++.+.....++++|+++|
T Consensus 144 ~~~f~~-~~~fG~~I~~f~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~D 222 (469)
T 2icy_A 144 HKIVEK-YTNSNVDIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSD 222 (469)
T ss_dssp HHHHGG-GTTSSSCEEEEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETT
T ss_pred HHHHHh-cccCCceEEEEEecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECC
Confidence 467777 5678999998866 3699999999765 233322224789999999
Q ss_pred eecCcCHHHHHHHHHHcCCcEEEEEEeCCCC-CCcceEEEeCCCCc--EEEEEecCCC--------CCCCeEEEEEEEeC
Q 022113 53 VISEYPFAEMIEFHKAHGGEASIMVTKVDEP-SKYGVVVMEESTGK--VEKFVEKPKL--------FVGNKINAGIYLLN 121 (302)
Q Consensus 53 ~l~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~g~v~~d~~~~~--v~~~~ekp~~--------~~~~~~~~Giy~~~ 121 (302)
.+.......++.+|.++++++++.+.+..++ .+||.+... +++ ++++.|+|.. ...++.|+|+|+|+
T Consensus 223 nL~~~~d~~ll~~~~~~~a~~t~~v~~k~~~~~~~Gvl~~~--dg~~~vvE~~e~p~~~~~e~k~~~~~~~~N~g~y~~~ 300 (469)
T 2icy_A 223 NLGAIVDLTILKHLIQNKNEYCMEVTPKTLADVKGGTLISY--EGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVN 300 (469)
T ss_dssp BTTCCCCHHHHHHHHHHTCSEEEEEEECCTTCCSSCEEEEE--TTEEEEECGGGSCGGGHHHHHSSSSCCEEEEEEEEEE
T ss_pred cCCcccCHHHHHHHHHcCCCeeEEEEEeccCCCceeEEEEE--CCEEEEEEEeccChhhhhhhccccccceeeEEEEEEc
Confidence 9987654579999999999999999988876 579988764 455 5555566643 12357899999999
Q ss_pred HhhHhhccCCC-CC-----------------ccccchHHHHhcCcEEEEEe-cCeeEecCChHHHHHHHH
Q 022113 122 PAVLDRIELRP-TS-----------------IEKEVFPKIALEGKLFAMVL-PGFWMDIGQPRDYITGLR 172 (302)
Q Consensus 122 ~~~l~~l~~~~-~~-----------------~~~~~~~~l~~~~~v~~~~~-~g~~~digt~~~~~~a~~ 172 (302)
+++++.+.... .. ++..+++......+..++.. ..+|..+.++.+++.+.+
T Consensus 301 ~~~L~~i~~~~~~~lp~~v~~K~id~~~~~klE~~~~D~~~~~~~~~~~~V~R~~F~PvKn~~dll~~~s 370 (469)
T 2icy_A 301 LKAIKKLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFDNAIGVNVPRSRFLPVKASSDLLLVQS 370 (469)
T ss_dssp HHHHHHHHHTTCCCCCCBCCEEEETTEEEECCBCCGGGGGGGSTTCEEEECCGGGCCBCCSHHHHHHHHS
T ss_pred HHHHHHHHhcccCCchhhccceecCCCceEeehHhhHHHHHhcCCeEEEEechhHcCcCCCHHHHHHHHH
Confidence 99998775321 11 11111222222234444433 457999999998877765
No 93
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.41 E-value=1.3e-12 Score=114.98 Aligned_cols=100 Identities=16% Similarity=0.216 Sum_probs=63.8
Q ss_pred cccccccCceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcEEeceEEccCCEECCCc------------------
Q 022113 182 SSLKLATGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHA------------------ 243 (302)
Q Consensus 182 ~~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~------------------ 243 (302)
..+.+.+++.|.+++.|+++++|+++|.|+ +|+|++++.|+++++|.+++|+++|.|+.++
T Consensus 70 ~~a~I~~~~~I~g~~~Ig~~~~Ig~~~~I~-~~~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~s~I~~~~~~~~~~ 148 (334)
T 2pig_A 70 AGTEITGNARITQPCTLYNNVRIGDNVWID-RADISDGARISDNVTIQSSSVREECAIYGDARVLNQSEILAIQGLTHEH 148 (334)
T ss_dssp TTCEECTTCEEESSCEEESSCEECTTCEEE-SCEEESSCEECTTCEEESCEEESSEEECTTCEEESSCEEEC--------
T ss_pred CCcEECCCcEEeeeeeECCCcEECCCCEEE-eEEEcCCCEEeCCcEEeccEEcCCeEEecCCEEeCCEEEeecceeeccc
Confidence 345566677777777777777777777776 7777888888877777766665555544443
Q ss_pred ----------EEeccEECCCCEECCCcEEccCcEECCCcEECCceEEcCC
Q 022113 244 ----------CISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGG 283 (302)
Q Consensus 244 ----------~i~~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~ 283 (302)
++.+++|+++|.|++++.|+ +++|++++.|++++.+..+
T Consensus 149 ~~g~~I~~~a~I~~s~I~~g~~I~~~a~I~-~svI~~~a~I~~~a~V~~~ 197 (334)
T 2pig_A 149 AQILQIYDRATVNHSRIVHQVQLYGNATIT-HAFIEHRAEVFDFALIEGD 197 (334)
T ss_dssp CCCEEECTTCEEESCEEETTCEECTTCEEE-SEEECTTCEECTTCEEECC
T ss_pred CCCeEECCCCEEeccEEcCCCEEcCCeEEe-CcEEcCCCEECCCcEECCc
Confidence 33445555555566666654 4566666666666555444
No 94
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=99.41 E-value=1.6e-12 Score=120.56 Aligned_cols=24 Identities=25% Similarity=0.134 Sum_probs=13.8
Q ss_pred EEEEecCCCCCChHHHHHcHhhhc
Q 022113 16 IICSQETEPLGTAGPLALARDKLI 39 (302)
Q Consensus 16 i~~~~~~~~~Gt~~al~~a~~~i~ 39 (302)
+-...-+.|+=+...+...++...
T Consensus 105 vlv~~~D~P~i~~~~i~~l~~~~~ 128 (468)
T 1hm9_A 105 TLVIAGDTPLITGESLKNLIDFHI 128 (468)
T ss_dssp EEEEETTCTTCCHHHHHHHHHHHH
T ss_pred EEEEeCCccccCHHHHHHHHHHHH
Confidence 333344556556677777766553
No 95
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=99.41 E-value=1e-12 Score=107.93 Aligned_cols=46 Identities=17% Similarity=0.135 Sum_probs=35.6
Q ss_pred ccEECCCCEECCCcEEccCcEECCCcEECCceEEcC----CeE---ecCcccc
Q 022113 247 SSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNG----GVV---LPHKEIK 292 (302)
Q Consensus 247 ~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~----~~v---~~~~~~~ 292 (302)
.++||++|+||.++.|.+++.||+++.|+++++|.. +++ .|++.++
T Consensus 130 ~v~IG~~v~IG~~~~I~~gv~IG~~~vIgagsvV~~dvp~~~v~~G~Pak~i~ 182 (199)
T 3ftt_A 130 PIHIGSNTWFGGHVAVLPGVTIGEGSVIGAGSVVTKDIPPHSLAVGNPCKVVR 182 (199)
T ss_dssp CEEECSSEEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEEETTTTEEEE
T ss_pred CeEEcCCcEEcCCCEECCCCEECCCCEECCCCEECcccCCCCEEEEECCEEEe
Confidence 457899999999999988999999999999888754 333 3666554
No 96
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.41 E-value=3.3e-12 Score=114.97 Aligned_cols=15 Identities=20% Similarity=0.266 Sum_probs=9.5
Q ss_pred eEEccCCEECCCcEE
Q 022113 231 CTVMRGVRIKKHACI 245 (302)
Q Consensus 231 ~~i~~~~~i~~~~~i 245 (302)
+.|+++|.||++++|
T Consensus 229 v~Ig~~v~IG~~~~I 243 (374)
T 2iu8_A 229 VIIEDDVEIGANTTI 243 (374)
T ss_dssp EEECTTCEECTTCEE
T ss_pred EEECCCCEECCCcEE
Confidence 556666666666655
No 97
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.41 E-value=1.9e-12 Score=109.91 Aligned_cols=98 Identities=11% Similarity=0.147 Sum_probs=80.5
Q ss_pred cccccCceEecce----EEcCCcEECCCCEECC-----------------------CcEECCCCEECCCcEEec-eEEcc
Q 022113 184 LKLATGANIVGNV----LVHESAQIGEGCLIGP-----------------------DVAVGPGCVVESGVRLSR-CTVMR 235 (302)
Q Consensus 184 ~~~~~~~~i~~~~----~i~~~~~i~~~~~i~~-----------------------~~~ig~~~~i~~~~~i~~-~~i~~ 235 (302)
..+.+++.|.++. .||+++.|+++|.|.+ +++||++|.|+++|.|.. ++|++
T Consensus 84 ~~I~~~~~I~~~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~g~~~~~~~~~~~~~~~~v~IG~~v~Ig~~~~I~~~~~Ig~ 163 (247)
T 1qre_A 84 VMVSPMASIRSDEGMPIFVGDRSNVQDGVVLHALETINEEGEPIEDNIVEVDGKEYAVYIGNNVSLAHQSQVHGPAAVGD 163 (247)
T ss_dssp CEECTTCEEEESSSCCEEECTTCEECTTCEEEECCSBCTTSCBCGGGCEEETTEEESEEECTTCEECTTCEEEEEEEECT
T ss_pred CEECCCcEEecCCCCCEEECCCCEECCCeEEEecccccccCcccccceeeccCccCceEECCCCEECCCCEEcCCcEECC
Confidence 4455566665533 7888888888888864 389999999999999997 99999
Q ss_pred CCEECCCcEEeccEECCCCEECCCcEEccCcEECCCcEECCceEEcC
Q 022113 236 GVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNG 282 (302)
Q Consensus 236 ~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~ 282 (302)
+|.||.++.|.++.|+++++|++++.+ +++.|++++.|++++++..
T Consensus 164 ~v~IG~~a~I~~v~Ig~~~~IgagsvV-~~~~I~~~~~v~~g~vv~~ 209 (247)
T 1qre_A 164 DTFIGMQAFVFKSKVGNNCVLEPRSAA-IGVTIPDGRYIPAGMVVTS 209 (247)
T ss_dssp TCEECTTCEEEEEEECTTCEECTTCEE-ESCEECTTBEECTTCEECS
T ss_pred CCEECCCCEEeceEECCCCEECCCCEE-CCeEeCCCCEECCCCEEec
Confidence 999999999977889999999999988 7788888888877777753
No 98
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.39 E-value=1.1e-12 Score=120.88 Aligned_cols=95 Identities=13% Similarity=0.171 Sum_probs=75.1
Q ss_pred cceEEcCCcEECCCCEECCCcEECCCCEECCCcEEeceEEccCCEECCCcEEeccEECCCCEECCCcEEccCcEECCCcE
Q 022113 194 GNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVH 273 (302)
Q Consensus 194 ~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~~i~~~~~ 273 (302)
....+++++.|++++++.+++.||++|.|++++.|.+++|+++|.|+++|+|.+++||++|+|++++.| .+++||++|.
T Consensus 272 ~~~~I~~~a~I~p~a~i~g~v~IG~~~~I~~~a~I~~v~IG~~~~I~~~~~I~~~vIG~~~~Ig~~a~I-~gv~IGd~v~ 350 (496)
T 3c8v_A 272 SGAGSASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERNCVTAHGGKI-INAHLGDMIF 350 (496)
T ss_dssp ----CCTTCEECTTSEEESSCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEEEESCEECTTCEE-ESEEEEETCE
T ss_pred cCcccCCCcEECCCcEEeCCeEECCCCEECCCcEEeceEecCCCEECCCceEeceEeCCCCEECCCcEE-cCceECCCcE
Confidence 345667778888888888888999999999999999999999999999999999999999999998887 3477777777
Q ss_pred ECCceEEcCC----eEecCc
Q 022113 274 VCDEIYSNGG----VVLPHK 289 (302)
Q Consensus 274 v~~~~~v~~~----~v~~~~ 289 (302)
||++++|.++ ++++..
T Consensus 351 IG~~a~I~~~~~~~v~IG~~ 370 (496)
T 3c8v_A 351 TGFNSFLQGSESSPLKIGDG 370 (496)
T ss_dssp ECTTCEEECCSSSCEEECTT
T ss_pred ECCCCEEeCCCCcceEECCC
Confidence 7776666666 555443
No 99
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.39 E-value=3.1e-12 Score=112.63 Aligned_cols=81 Identities=20% Similarity=0.193 Sum_probs=68.5
Q ss_pred ccCceEec-ceEEcCCcEECCCCEECCCcEECCCCEECCCcEEeceEEccCCEECCCcEEeccEECCCCEECCCcEEccC
Q 022113 187 ATGANIVG-NVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENM 265 (302)
Q Consensus 187 ~~~~~i~~-~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~ 265 (302)
..+++|.+ ++.+++++.|+++|.|++++.||++|.|+++|.|.+|.|++++.|+++++|.++++++++.|+.++++.++
T Consensus 56 ~~~~~I~~~~a~I~~~a~I~~~~~I~g~~~Ig~~~~Ig~~~~I~~~~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~ 135 (334)
T 2pig_A 56 QGDCWIYDENAMAFAGTEITGNARITQPCTLYNNVRIGDNVWIDRADISDGARISDNVTIQSSSVREECAIYGDARVLNQ 135 (334)
T ss_dssp SSSCEECCTTCEEETTCEECTTCEEESSCEEESSCEECTTCEEESCEEESSCEECTTCEEESCEEESSEEECTTCEEESS
T ss_pred CCceEEcCCCeEEcCCcEECCCcEEeeeeeECCCcEECCCCEEEeEEEcCCCEEeCCcEEeccEEcCCeEEecCCEEeCC
Confidence 45578888 88899999999999999999999999999999999999999999999999998887777776666655444
Q ss_pred cE
Q 022113 266 TI 267 (302)
Q Consensus 266 ~~ 267 (302)
+.
T Consensus 136 s~ 137 (334)
T 2pig_A 136 SE 137 (334)
T ss_dssp CE
T ss_pred EE
Confidence 33
No 100
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=99.37 E-value=8.4e-13 Score=110.14 Aligned_cols=49 Identities=16% Similarity=0.135 Sum_probs=39.6
Q ss_pred eccEECCCCEECCCcEEccCcEECCCcEECCceEEc----CCeE---ecCcccccc
Q 022113 246 SSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSN----GGVV---LPHKEIKSS 294 (302)
Q Consensus 246 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~----~~~v---~~~~~~~~~ 294 (302)
++++||++|+||+++.|.+++.||+++.|+++++|. ++++ .|++.++.+
T Consensus 118 g~v~IG~~v~IG~~a~I~~gv~IG~gavIgagsvV~~dVp~~~vv~G~PAk~ir~r 173 (220)
T 4hur_A 118 GDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTKNVAPYSIVGGNPLKFIRKR 173 (220)
T ss_dssp CCEEECSSCEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEEETTTTEEEEES
T ss_pred CCeEECCCcEECCCCEEeCCCEECCCCEEcCCCEEcccCCCCcEEeCCCCEeehhc
Confidence 457899999999999999999999999999999975 4444 467776654
No 101
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=99.36 E-value=4.1e-12 Score=104.20 Aligned_cols=46 Identities=17% Similarity=0.276 Sum_probs=35.8
Q ss_pred ccEECCCCEECCCcEEccCcEECCCcEECCceEEcC----CeE---ecCcccc
Q 022113 247 SSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNG----GVV---LPHKEIK 292 (302)
Q Consensus 247 ~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~----~~v---~~~~~~~ 292 (302)
+++||++|+||+++.|.++++||+++.|+++++|.. +++ .|++.++
T Consensus 131 ~v~IGd~v~IG~~a~I~~gv~IG~~~vIgagsvV~~dvp~~~vv~G~PArvik 183 (203)
T 1krr_A 131 PITIGNNVWIGSHVVINPGVTIGDNSVIGAGSIVTKDIPPNVVAAGVPCRVIR 183 (203)
T ss_dssp CEEECTTCEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEEETTTTEEEE
T ss_pred CcEECCCeEECCCCEEeCCeEECCCCEECCCCEECCCcCCCcEEEccCcEEec
Confidence 478899999999999988999999999999988654 333 3555554
No 102
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=99.35 E-value=3.5e-12 Score=103.35 Aligned_cols=37 Identities=14% Similarity=0.252 Sum_probs=30.6
Q ss_pred ccEECCCCEECCCcEEccCcEECCCcEECCceEEcCC
Q 022113 247 SSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGG 283 (302)
Q Consensus 247 ~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~ 283 (302)
+++||++|+||+++.|.++++||+++.|+++++|..+
T Consensus 130 ~v~IGd~v~IG~~~~I~~gv~IG~~~vIgagsvV~~~ 166 (185)
T 2p2o_A 130 PVVIGHNVWIGGRAVINPGVTIGDNAVIASGAVVTKD 166 (185)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTCEECTTCEECSC
T ss_pred CeEEcCCeEECCCCEECCCCEECCCCEECCCCEECCC
Confidence 4788888888888888888888888888888887644
No 103
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=99.35 E-value=3.7e-12 Score=102.91 Aligned_cols=37 Identities=19% Similarity=0.226 Sum_probs=30.5
Q ss_pred ccEECCCCEECCCcEEccCcEECCCcEECCceEEcCC
Q 022113 247 SSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGG 283 (302)
Q Consensus 247 ~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~ 283 (302)
+++||++|+||+++.|.+++.||+++.|+++++|..+
T Consensus 128 ~v~IG~~v~Ig~~a~I~~gv~IG~~~vIgagsvV~~d 164 (182)
T 1ocx_A 128 PVTIGNNVWIGGRAVINPGVTIGDNVVVASGAVVTKD 164 (182)
T ss_dssp CEEECTTCEECTTCEECTTCEECTTCEECTTCEECSC
T ss_pred CeEEeCCeEECCCCEECCCcEECCCCEECCCCEECCc
Confidence 5788888888888888888888888888888886544
No 104
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=99.34 E-value=2.2e-12 Score=110.47 Aligned_cols=94 Identities=20% Similarity=0.279 Sum_probs=53.7
Q ss_pred ceEEcCCcEECCCCEEC--CCcEECCCCEECCCcEEeceEEccCCEECCCcE---EeccEECCCCEECCCcEEccCcEEC
Q 022113 195 NVLVHESAQIGEGCLIG--PDVAVGPGCVVESGVRLSRCTVMRGVRIKKHAC---ISSSIIGWHSTVGQWARVENMTILG 269 (302)
Q Consensus 195 ~~~i~~~~~i~~~~~i~--~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~---i~~~~i~~~~~i~~~~~i~~~~~i~ 269 (302)
++.|+++++||+++.|+ .+++||++|+||++|.|. +++.|+.... ...++||++|+||++++|.++++||
T Consensus 164 gi~I~p~a~IG~~v~I~hg~gvvIG~~~~IGd~v~I~-----~gvtIg~~~~~~~~r~~~IGd~v~IGaga~Il~gv~IG 238 (287)
T 3mc4_A 164 QTDIHPAARLGSGLFLDHATGLVVGETAVVEDNVSIL-----HGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGNIQVG 238 (287)
T ss_dssp CCEECTTCEECSSCEEESCTTCEECTTCEECSSCEEE-----TTCEEEC-----CCCSCEECTTCEECTTCEEESSCEEC
T ss_pred CeEECCCCEECCCeEEccCCCeEECCCeEECCCCEEc-----CCCEEcCCcccCCCcCCEECCCCEECCCCEECCCcEEC
Confidence 34444555555555554 344555555555444432 2222222111 1236788888888888888888888
Q ss_pred CCcEECCceEEcC----CeE---ecCccccc
Q 022113 270 EDVHVCDEIYSNG----GVV---LPHKEIKS 293 (302)
Q Consensus 270 ~~~~v~~~~~v~~----~~v---~~~~~~~~ 293 (302)
++|+||++++|.. +++ .|++.++.
T Consensus 239 ~~a~IGagsvV~kdVp~~svvvG~PAkii~~ 269 (287)
T 3mc4_A 239 QCSKIAAGSVVLKSVPHNVTVAGVPARIIGE 269 (287)
T ss_dssp TTCEECTTCEECSCBCTTEEEETTTTEEEEE
T ss_pred CCCEECCCCEEccccCCCCEEEccCCEEeCc
Confidence 8888888887653 333 36666553
No 105
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=99.34 E-value=4.4e-12 Score=118.65 Aligned_cols=97 Identities=12% Similarity=0.164 Sum_probs=75.4
Q ss_pred ccCceEecceEEcCCcEECCCCEEC-----CCcEECCCCEECCCcEEeceEEccCCEECCCcEEec--------cEECCC
Q 022113 187 ATGANIVGNVLVHESAQIGEGCLIG-----PDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISS--------SIIGWH 253 (302)
Q Consensus 187 ~~~~~i~~~~~i~~~~~i~~~~~i~-----~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~--------~~i~~~ 253 (302)
.+++.+++.+++.+++.|++++.|+ .+++||++|.|+..+.|.+++|+++|.||+++.+.+ ++||++
T Consensus 338 g~~~~ig~~~~i~~~~~i~~~v~IG~~v~ik~s~Ig~gskI~~~~~i~d~~Ig~~v~IG~g~i~~n~dg~~~~~t~IGd~ 417 (501)
T 3st8_A 338 GDGAAVGPFTYLRPGTALGADGKLGAFVEVKNSTIGTGTKVPHLTYVGDADIGEYSNIGASSVFVNYDGTSKRRTTVGSH 417 (501)
T ss_dssp CTTCEECSSEEECTTCEECTTCEEEETEEEESCEECTTCEEEESCEEESEEECSSCEECTTCEEECBCSSSBCCEEECTT
T ss_pred ccccccCCceeecCCcEEccccccCCeEEEccceecCCcEEeccceecCceEcCCCEECCCEEEEcccCCcccCCEECCC
Confidence 3444445555555555555555444 367888888888888888999999999999998843 889999
Q ss_pred CEECCCcEEccCcEECCCcEECCceEEcCC
Q 022113 254 STVGQWARVENMTILGEDVHVCDEIYSNGG 283 (302)
Q Consensus 254 ~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~ 283 (302)
|.||.++.|.+++.||+++.|++|++|..+
T Consensus 418 ~~iG~~~~l~~~v~Ig~~~~i~ags~v~~d 447 (501)
T 3st8_A 418 VRTGSDTMFVAPVTIGDGAYTGAGTVVRED 447 (501)
T ss_dssp CEECTTCEEESSEEECTTCEECTTCEECSC
T ss_pred cEECCCCEEcCCcEECCCCEECCCCEECcc
Confidence 999999999999999999999999887543
No 106
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=99.33 E-value=3.6e-12 Score=110.58 Aligned_cols=89 Identities=20% Similarity=0.233 Sum_probs=52.4
Q ss_pred cceEEcCCcEECCCCEE--CCCcEECCCCEECCCcEEe-ceEEccCCEECCC------cEEeccEECCCCEECCCcEEcc
Q 022113 194 GNVLVHESAQIGEGCLI--GPDVAVGPGCVVESGVRLS-RCTVMRGVRIKKH------ACISSSIIGWHSTVGQWARVEN 264 (302)
Q Consensus 194 ~~~~i~~~~~i~~~~~i--~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~------~~i~~~~i~~~~~i~~~~~i~~ 264 (302)
.++.|++++.||+++.| +.+++||++|.||++|.|. ++.|++++...+. ..-.+.+||++|+||++++|.+
T Consensus 189 ~gv~I~p~a~IG~~v~I~hg~gvvIG~~~~IG~~v~I~~gvtIg~~~~~~~~~g~~i~~~~~~~~IGd~V~IGaga~Il~ 268 (310)
T 3f1x_A 189 TGIDIHPGAQIGHHFTIDHGTGVVIGATSIIGNNVKLYQGVTLGAKSFPLDNNGNPIKGIPRHPILEDDVIVYSNATILG 268 (310)
T ss_dssp HSCEECTTCEECSSCEEESCTTCEECTTCEECSSCEEETTCEEECC--------------CCSCEECTTCEECTTCEEES
T ss_pred CCcEECCCCEECCCcEECCCCCeEECCceEEcCCCEECCCCEECCCccccccccccccCCCCCCEECCCcEEcCCCEECC
Confidence 34445555555555555 4455555555555555443 2333333311100 1113468899999999999988
Q ss_pred CcEECCCcEECCceEEcC
Q 022113 265 MTILGEDVHVCDEIYSNG 282 (302)
Q Consensus 265 ~~~i~~~~~v~~~~~v~~ 282 (302)
+++||++++||++++|..
T Consensus 269 gv~IGd~a~IGagsvV~~ 286 (310)
T 3f1x_A 269 RVTIGKGATVGGNIWVTE 286 (310)
T ss_dssp SCEECTTCEECSSCEECS
T ss_pred CcEECCCCEECCCCEECC
Confidence 999999999999988764
No 107
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=99.30 E-value=3.1e-11 Score=102.61 Aligned_cols=165 Identities=13% Similarity=0.078 Sum_probs=115.6
Q ss_pred HHhhcCCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCe-ec-CcCHHHHHHHHHHcC-CcEEEEEEeC---
Q 022113 7 EFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDV-IS-EYPFAEMIEFHKAHG-GEASIMVTKV--- 80 (302)
Q Consensus 7 ~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~-l~-~~~l~~~~~~~~~~~-~~~~l~~~~~--- 80 (302)
++.+.+|.++.+..++.+.||. ++..++..+.....+.++++.||. +. +..+.++++.|.+.. ..++.++.+.
T Consensus 56 ~~~~~~g~~v~~~~~~~~~Gt~-~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~~~~~~ 134 (253)
T 4fcu_A 56 EICRAEGVDVVLTSADHPSGTD-RLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHAL 134 (253)
T ss_dssp HHHHTTTCCEEECCTTCCCHHH-HHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCCH
T ss_pred HHHHHcCCeEEEeCCCCCChHH-HHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeEEcCCH
Confidence 3345578888777777788884 788888877521236789999999 55 456999999998763 3444444442
Q ss_pred ---CCCCCcceEEEeCCCCcEEEEEecCC----C---------CCCCeEEEEEEEeCHhhHhhccCCCCC-cc----ccc
Q 022113 81 ---DEPSKYGVVVMEESTGKVEKFVEKPK----L---------FVGNKINAGIYLLNPAVLDRIELRPTS-IE----KEV 139 (302)
Q Consensus 81 ---~~~~~~g~v~~d~~~~~v~~~~ekp~----~---------~~~~~~~~Giy~~~~~~l~~l~~~~~~-~~----~~~ 139 (302)
.+|+.++ +.+|+ +|+++.|.++|- . +...+.++|+|+|++++|..+.....+ ++ -+.
T Consensus 135 ~~~~~p~~~k-vv~d~-~g~~l~fsr~~ip~~r~~~~~~~~~~~~~~~~~~GiY~f~~~~l~~~~~~~~~~le~~e~le~ 212 (253)
T 4fcu_A 135 DEFQRDSIVK-VVMSK-QNEALYFSRATIPYDRDGAKRDEPTLHTQAFRHLGLYAYRVSLLQEYVTWEMGKLEKLESLEQ 212 (253)
T ss_dssp HHHHCTTSCE-EEECT-TSBEEEEESSCCSCCTTTSSSSSCCCCSCCEEEEEEEEEEHHHHHHHTTSCCCHHHHHHTCTT
T ss_pred HHccCCCccE-EEECC-CCeEEEecCCCCCCCCCcccccccccccceeEEEEEEEeCHHHHHHHHhCCCCcccchhHHHH
Confidence 4566655 45665 799999998763 1 124578999999999999877532221 11 122
Q ss_pred hHHHHhcCcEEEEEecCe-eEecCChHHHHHHHHHH
Q 022113 140 FPKIALEGKLFAMVLPGF-WMDIGQPRDYITGLRLY 174 (302)
Q Consensus 140 ~~~l~~~~~v~~~~~~g~-~~digt~~~~~~a~~~~ 174 (302)
+..+....++.++..+++ |.+++||+++.+++..+
T Consensus 213 lr~l~~G~~I~~~~~~~~~~~~IdtpeDL~~a~~~l 248 (253)
T 4fcu_A 213 LRVLENGHRIAIAVAEANLPPGVDTQADLDRLNNMP 248 (253)
T ss_dssp HHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHTSC
T ss_pred HHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHH
Confidence 333445678999999999 99999999999886543
No 108
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=99.30 E-value=6.1e-11 Score=96.56 Aligned_cols=57 Identities=16% Similarity=0.154 Sum_probs=36.5
Q ss_pred EEccCCEECCCcEEec-------------cEECCCCEECCCcEEccCcEECCCcEECCceEEcCCeEecC
Q 022113 232 TVMRGVRIKKHACISS-------------SIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPH 288 (302)
Q Consensus 232 ~i~~~~~i~~~~~i~~-------------~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~~~ 288 (302)
.||++|.|++++.|.. ..++..+.||++++|+.+++|.++++||++++|+++++|..
T Consensus 100 ~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~~~vIgagsvV~~ 169 (190)
T 3hjj_A 100 RIGDHCMFAPGVHIYTATHPLHPVERNSGKEYGKPVKIGNNVWVGGGAIINPGVSIGDNAVIASGAVVTK 169 (190)
T ss_dssp EECTTCEECTTCEEECEECCSSHHHHTSSEEEECCEEECTTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred EECCceEEcCCcEEecCCccCchhhccccccccCCeEECCCCEECCCCEECCCCEECCCCEECCCCEECc
Confidence 4555555555555532 34456667777777777777777777777777777776653
No 109
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=99.29 E-value=5e-12 Score=109.08 Aligned_cols=31 Identities=10% Similarity=0.142 Sum_probs=15.1
Q ss_pred cEECCCCEECCCcEEccCcEECCCcEECCceEE
Q 022113 248 SIIGWHSTVGQWARVENMTILGEDVHVCDEIYS 280 (302)
Q Consensus 248 ~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v 280 (302)
|.||.++.| +++|+.+|+||.+++|..++.|
T Consensus 263 v~IGAnAtI--GVtIGd~~iIGAGSVVtkdt~I 293 (347)
T 3r5d_A 263 CLIGANAGI--GIPLGDRNIVEAGLYITAGTKV 293 (347)
T ss_dssp CEECTTCEE--CSCBCTTCEECTTCEECTTCEE
T ss_pred CEECCCCEE--eeEECCCCEECCCCEECCCCEE
Confidence 444444444 4444444555555555555444
No 110
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=99.29 E-value=2.7e-11 Score=103.80 Aligned_cols=32 Identities=3% Similarity=0.099 Sum_probs=17.9
Q ss_pred ccccccCceEecceEEcCCcEECCCCEECCCc
Q 022113 183 SLKLATGANIVGNVLVHESAQIGEGCLIGPDV 214 (302)
Q Consensus 183 ~~~~~~~~~i~~~~~i~~~~~i~~~~~i~~~~ 214 (302)
...+++.+.|++.+.|++++.|+++++|..++
T Consensus 161 gv~I~P~AvI~~gA~IGeGv~Igp~~fVniga 192 (332)
T 3fsy_A 161 GVRIADADRVRLGAHLAPGTTVMHEGFVNYNA 192 (332)
T ss_dssp TCEESCGGGBBTTEEECTTCEECTTCEECTTE
T ss_pred CcEECCcCEECCCCEECCCCEEccccEEEECC
Confidence 34555666666666666666666555554433
No 111
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.28 E-value=2.5e-11 Score=103.50 Aligned_cols=151 Identities=14% Similarity=0.207 Sum_probs=99.2
Q ss_pred HHhhcCCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCeecCcC-HHHHHHHHHHcCCcEEEEEEeCCCC-C
Q 022113 7 EFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYP-FAEMIEFHKAHGGEASIMVTKVDEP-S 84 (302)
Q Consensus 7 ~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~~~~-l~~~~~~~~~~~~~~~l~~~~~~~~-~ 84 (302)
++.+.|++++.+..+...+||+++++.|++++ +++++++||+++..+ +.+++ +.+ ..+.+ ...++ .
T Consensus 87 ~~~~~~~~~iv~~~~~~~~g~~~al~~a~~~~-----~~~lv~~~D~~~~~~~~~~~~----~~~--~~~t~-~~~~~~~ 154 (254)
T 1jyk_A 87 YLKEKYGVRLVFNDKYADYNNFYSLYLVKEEL-----ANSYVIDADNYLFKNMFRNDL----TRS--TYFSV-YREDCTN 154 (254)
T ss_dssp HHHHHHCCEEEECTTTTTSCTHHHHHTTGGGC-----TTEEEEETTEEESSCCCCSCC----CSE--EEEEC-EESSCSS
T ss_pred HHHHhCCcEEEECCCccCCCcHHHHHHHHHHC-----CCEEEEeCCcccCHHHHHHHH----hCC--ceEEE-EcccCCC
Confidence 33445676654433444789999999999987 258899999976545 33322 222 22222 22333 3
Q ss_pred CcceEEEeCCCCcEEEEEecCCCCCCCeEEEEEEEeCHhhHhhc----c----CC--CCCccccchHHHHhcCcEEEEEe
Q 022113 85 KYGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRI----E----LR--PTSIEKEVFPKIALEGKLFAMVL 154 (302)
Q Consensus 85 ~~g~v~~d~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l----~----~~--~~~~~~~~~~~l~~~~~v~~~~~ 154 (302)
.|+++ +|+ +|+++.|.|+|. ..++++|+|+|+++.++.+ + .+ ......+++..+.+..++.++.+
T Consensus 155 ~~~v~-~d~-~g~v~~~~e~~~---~~~~~~Giy~~~~~~~~~l~~~l~~~~~~~~~~e~~~~d~~~~l~~~~~v~~~~~ 229 (254)
T 1jyk_A 155 EWFLV-YGD-DYKVQDIIVDSK---AGRILSGVSFWDAPTAEKIVSFIDKAYVSGEFVDLYWDNMVKDNIKELDVYVEEL 229 (254)
T ss_dssp CCEEE-ECT-TCBEEEEECCCS---SEEBCCSEEEECHHHHHHHHHHHHHHHTTTCCTTCCTTHHHHTTGGGCCEEEEEC
T ss_pred CeEEE-ECC-CCeEEEEEECCC---CCcEEEEEEEEcHHHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhCCeEEEEe
Confidence 68765 765 789999999863 3588999999998744322 1 11 11112334444556678998888
Q ss_pred c-CeeEecCChHHHHHHHHHH
Q 022113 155 P-GFWMDIGQPRDYITGLRLY 174 (302)
Q Consensus 155 ~-g~~~digt~~~~~~a~~~~ 174 (302)
+ ++|.+|+|+++|.+++..+
T Consensus 230 ~~~~~~~Idt~edl~~a~~~l 250 (254)
T 1jyk_A 230 EGNSIYEIDSVQDYRKLEEIL 250 (254)
T ss_dssp CTTSEEECCSHHHHHHHHHHH
T ss_pred cCCeEEEcCCHHHHHHHHHHh
Confidence 7 7999999999999997755
No 112
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.28 E-value=6.3e-11 Score=99.46 Aligned_cols=154 Identities=14% Similarity=0.125 Sum_probs=104.5
Q ss_pred cEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCe-ecC-cCHHHHHHHHHHcCCcEEEEEEeC---CCCCCcce
Q 022113 14 IKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDV-ISE-YPFAEMIEFHKAHGGEASIMVTKV---DEPSKYGV 88 (302)
Q Consensus 14 ~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~-l~~-~~l~~~~~~~~~~~~~~~l~~~~~---~~~~~~g~ 88 (302)
.++.+..++.+.||++++ .++..+. .+.+++++||. +++ .++.++++.|.+.++.+++..... .++..++.
T Consensus 61 ~~~~~~~~~~~~g~~~~~-~~~~~~~---~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (234)
T 2y6p_A 61 CEVFLTPSDLPSGSDRVL-YVVRDLD---VDLIINYQGDEPFVYEEDIKLIFRELEKGERVVTLARKDKEAYERPEDVKV 136 (234)
T ss_dssp SEEEECCTTCCSHHHHHH-HHHTTCC---CSEEEECCTTCCCCCHHHHHHHHHHHHHTCSEEEEEEECSGGGGCTTSCEE
T ss_pred eEEEECCcccccchHHHH-HHHHhCC---CCEEEEecCCcCcCCHHHHHHHHHHHHhCCCeEEEecCCHHHhcCCCceEE
Confidence 566555556678999876 4555553 26899999999 777 679999999987764344444321 13444443
Q ss_pred EEEeCCCCcEEEEEecCCC--C----CCCeEEEEEEEeCHhhHhhccCCCCC-cc-ccc---hHHHHhcCcEEEEEecCe
Q 022113 89 VVMEESTGKVEKFVEKPKL--F----VGNKINAGIYLLNPAVLDRIELRPTS-IE-KEV---FPKIALEGKLFAMVLPGF 157 (302)
Q Consensus 89 v~~d~~~~~v~~~~ekp~~--~----~~~~~~~Giy~~~~~~l~~l~~~~~~-~~-~~~---~~~l~~~~~v~~~~~~g~ 157 (302)
..++ +|++..|.|+|.. . ...+.++|+|+|+++.|..+...... +. .+. +..+.++.++.++..+++
T Consensus 137 -~~~~-~g~v~~~~e~~~~~~~~~~~~~~~~~~giy~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~g~~v~~~~~~~~ 214 (234)
T 2y6p_A 137 -VLDR-EGYALYFSRSPIPYFRKNDTFYPLKHVGIYGFRKETLMEFGAMPPSKLEQIEGLEQLRLLENGIKIKVLITENY 214 (234)
T ss_dssp -EECT-TSBEEEEESSCCSCCSSCCSSCCEEEEEEEEEEHHHHHHHHHSCCCHHHHHHTCTHHHHHHTTCCCEEEECCSC
T ss_pred -EEcC-CCCEeeeecCCCCcccccccceeeEEEEEEEcCHHHHHHHHhCCCCccchhhHHHHHHHHHCCCeEEEEEeCCc
Confidence 3454 7899999998742 1 13578999999999988665322111 10 111 222334678999999999
Q ss_pred eEecCChHHHHHHHHH
Q 022113 158 WMDIGQPRDYITGLRL 173 (302)
Q Consensus 158 ~~digt~~~~~~a~~~ 173 (302)
|.||++|++|..++..
T Consensus 215 ~~dI~t~~dl~~a~~~ 230 (234)
T 2y6p_A 215 YHGVDTEEDLKIVEEK 230 (234)
T ss_dssp CCCCCSHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHH
Confidence 9999999999988654
No 113
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=99.27 E-value=1.5e-11 Score=104.61 Aligned_cols=32 Identities=13% Similarity=0.124 Sum_probs=15.2
Q ss_pred EECCCcEEccCcEECCCcEECCceEEcCCeEe
Q 022113 255 TVGQWARVENMTILGEDVHVCDEIYSNGGVVL 286 (302)
Q Consensus 255 ~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~ 286 (302)
.||++|+|+.++.|.++++||++++|++++++
T Consensus 165 ~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV 196 (252)
T 3jqy_B 165 IISSYVWVGRNVSIMKGVSVGSGSVIGYGSIV 196 (252)
T ss_dssp EECSSCEECSSEEECTTCEECTTCEECTTCEE
T ss_pred EEecCcEECCCCEECCCCEECCCCEECCCCEE
Confidence 44444444444444444444444445544444
No 114
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=99.26 E-value=1.4e-11 Score=107.21 Aligned_cols=89 Identities=20% Similarity=0.237 Sum_probs=41.6
Q ss_pred CceEecceEEcCCcEE--CCCCEECCCcEECCCCEECCCcEEe-ceEEccCCEECCC----cEEec-cEECCCCEECCCc
Q 022113 189 GANIVGNVLVHESAQI--GEGCLIGPDVAVGPGCVVESGVRLS-RCTVMRGVRIKKH----ACISS-SIIGWHSTVGQWA 260 (302)
Q Consensus 189 ~~~i~~~~~i~~~~~i--~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~----~~i~~-~~i~~~~~i~~~~ 260 (302)
++.|++++.|++++.| +.+++|++++.||++|.|+.+++|. ++.+++++.++.+ ++|++ +.||.++.|..++
T Consensus 163 gv~I~p~a~IG~~v~I~~g~gvvIG~~~~IG~~v~I~~~vtIG~~~~ig~~~~i~~~~~~~~~IGd~v~IGaga~Ilggv 242 (313)
T 3q1x_A 163 SIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVLGNI 242 (313)
T ss_dssp CCEECTTCEECSSCEESSCTTCEECTTCEECSSCEECTTCEEECCCCCCTTCCCCCCSSCSCEECSSCEECTTCEEESSC
T ss_pred CeEECCCCEECCCEEECCCCceEECCCcEECCCCEECCCcEEeCCcEECCCceEcCCCccCCEECCCCEECCCCEECCCc
Confidence 4445555555555555 4445555555555555555555554 2333433333332 13322 3344444444444
Q ss_pred EEccCcEECCCcEECCc
Q 022113 261 RVENMTILGEDVHVCDE 277 (302)
Q Consensus 261 ~i~~~~~i~~~~~v~~~ 277 (302)
+|+.+++||.+++|..+
T Consensus 243 ~IG~~a~IGagsvV~~d 259 (313)
T 3q1x_A 243 IVGSHVRIGANCWIDRD 259 (313)
T ss_dssp EECSSEEECTTCEECSC
T ss_pred EECCCCEECCCCEECCC
Confidence 44444444444444443
No 115
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=99.25 E-value=4.6e-11 Score=101.64 Aligned_cols=27 Identities=15% Similarity=0.392 Sum_probs=23.9
Q ss_pred CcEE--EEeCCeecCcCHHHHHHHHHHcC
Q 022113 44 EPFF--VLNSDVISEYPFAEMIEFHKAHG 70 (302)
Q Consensus 44 ~~~l--v~~gD~l~~~~l~~~~~~~~~~~ 70 (302)
|++| ++++|++...+|.+.+.+|.+++
T Consensus 20 EP~L~~~l~~~IL~~~~l~~aLa~~la~k 48 (267)
T 1ssq_A 20 EPMLASFFHSTILKHQNLGGALSYLLANK 48 (267)
T ss_dssp CHHHHHHHHHHTTTSSSHHHHHHHHHHHH
T ss_pred CCHHHHHhcccccCCCCHHHHHHHHHhcc
Confidence 7999 89999999999999999997753
No 116
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.25 E-value=2.2e-10 Score=98.04 Aligned_cols=163 Identities=12% Similarity=0.128 Sum_probs=109.6
Q ss_pred cCCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCe-e-cCcCHHHHHHHHHHcCCcEEEEEEeCCCC-----
Q 022113 11 KLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDV-I-SEYPFAEMIEFHKAHGGEASIMVTKVDEP----- 83 (302)
Q Consensus 11 ~~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~-l-~~~~l~~~~~~~~~~~~~~~l~~~~~~~~----- 83 (302)
.+|+++.+..+..+.||+ .+..++..+.....+.+++++||. + .+.++.++++.|.+.++++++++.+..++
T Consensus 60 ~~~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (262)
T 1vic_A 60 SFGAEVCMTSVNHNSGTE-RLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVKIHDAEELFN 138 (262)
T ss_dssp HTTCEEEECCCSSCCHHH-HHHHHHHHTTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEEEEECCCHHHHTC
T ss_pred hcCCEEEECCccccCChH-HHHHHHHHhccCCCCEEEEEeCCcCccCHHHHHHHHHHHHhcCCCEEEEEEecCCHHHhcC
Confidence 467776333344567887 455666655321236789999998 3 35669999999988777888888887653
Q ss_pred CCcceEEEeCCCCcEEEEEecC-----------------CCCCCCeEEEEEEEeCHhhHhhccCCCCC-c-cccchH--H
Q 022113 84 SKYGVVVMEESTGKVEKFVEKP-----------------KLFVGNKINAGIYLLNPAVLDRIELRPTS-I-EKEVFP--K 142 (302)
Q Consensus 84 ~~~g~v~~d~~~~~v~~~~ekp-----------------~~~~~~~~~~Giy~~~~~~l~~l~~~~~~-~-~~~~~~--~ 142 (302)
..+..+..++ +|+++.|.+++ ..+...+.++|+|+|+++++..+...... . ..+++. .
T Consensus 139 ~~~~~~~~~~-~g~v~~f~~~~~~~~r~~~~~~~~~~~~~~p~~~~~~~giy~~~~~~l~~~~~~~~~~~~~~e~~~~~~ 217 (262)
T 1vic_A 139 PNAVKVLTDK-DGYVLYFSRSVIPYDRDQFMNLQDVQKVQLSDAYLRHIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLR 217 (262)
T ss_dssp TTSCEEEECT-TSBEEEEESSCSSCCHHHHTTCSCGGGCCCCTTCEEEEEEEEEEHHHHHHHHHSCCCHHHHHHTCTTHH
T ss_pred CCceEEEECC-CCCEeeeecCCCCcCCccccccccccccccccceEEEEEEEEeeHHHHHHHHhCCCCchhhhhhHHHHH
Confidence 3445455564 68999888764 22234689999999999988765321111 0 011111 2
Q ss_pred HH-hcCcEEEEEec-CeeEecCChHHHHHHHHHHH
Q 022113 143 IA-LEGKLFAMVLP-GFWMDIGQPRDYITGLRLYL 175 (302)
Q Consensus 143 l~-~~~~v~~~~~~-g~~~digt~~~~~~a~~~~l 175 (302)
++ ...++.++..+ ++|.||++|++|..++..+.
T Consensus 218 ~l~~g~~v~~~~~~~~~~~dI~tpeDl~~a~~~l~ 252 (262)
T 1vic_A 218 VLYNGERIHVELAKEVPAVGVDTAEDLEKVRAILA 252 (262)
T ss_dssp HHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHH
T ss_pred HHHCCCeEEEEEeCCCCCCCCCCHHHHHHHHHHHH
Confidence 33 45689999888 79999999999999887654
No 117
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=99.24 E-value=8e-11 Score=96.23 Aligned_cols=38 Identities=8% Similarity=0.047 Sum_probs=19.3
Q ss_pred ECCCCEECCCcEEccCcEECCCcEECCceEEcCCeEec
Q 022113 250 IGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLP 287 (302)
Q Consensus 250 i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~~ 287 (302)
++..+.||++++|+.+++|.++++||++++|+++++|.
T Consensus 129 ~~~~v~IG~~v~IG~~~~I~~gv~IG~~~vIgagsvV~ 166 (195)
T 3nz2_A 129 ICKPIVIEDDVWIGGNVVINQGVTIGARSVVAANSVVN 166 (195)
T ss_dssp EECCEEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred ecCCeEECCCCEEcCCCEECCCCEECCCCEECCCCEEc
Confidence 34444555555555555555555555555555555443
No 118
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=99.23 E-value=8.1e-11 Score=96.50 Aligned_cols=37 Identities=11% Similarity=0.040 Sum_probs=20.9
Q ss_pred ECCCCEECCCcEEccCcEECCCcEECCceEEcCCeEe
Q 022113 250 IGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVL 286 (302)
Q Consensus 250 i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~ 286 (302)
+...+.||++|+|+.+++|.++++||++++|+++++|
T Consensus 127 ~~~~v~IG~~v~IG~~~~I~~gv~IG~~~vIgagsvV 163 (199)
T 3ftt_A 127 KAGPIHIGSNTWFGGHVAVLPGVTIGEGSVIGAGSVV 163 (199)
T ss_dssp EECCEEECSSEEECTTCEECTTCEECTTCEECTTCEE
T ss_pred ecCCeEEcCCcEEcCCCEECCCCEECCCCEECCCCEE
Confidence 3455555555555555555555555555555555554
No 119
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=99.22 E-value=8.9e-11 Score=100.76 Aligned_cols=47 Identities=11% Similarity=0.078 Sum_probs=33.0
Q ss_pred ccEECCCCEECCCcEEccCcEECCCcEECCceEEcC----CeE---ecCccccc
Q 022113 247 SSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNG----GVV---LPHKEIKS 293 (302)
Q Consensus 247 ~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~----~~v---~~~~~~~~ 293 (302)
+++||++|+||++++|.++++||++++||++++|.. +++ .|++.++.
T Consensus 209 ~~~IGd~v~IGaga~Ilggv~IG~~a~IGagsvV~~dVp~~s~v~G~PAr~i~~ 262 (289)
T 1t3d_A 209 HPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVPARIVGK 262 (289)
T ss_dssp SCEECTTCEECTTCEEESSCEECTTCEECTTCEECSCBCTTCEEETTTTEEEEC
T ss_pred CeEECCCeEECCCCEEecCcEECCCCEECCCCEEccCCCCCCEEEecCCEEeCc
Confidence 367788888888888877788888888888877653 333 46666553
No 120
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=99.21 E-value=6.4e-11 Score=98.34 Aligned_cols=104 Identities=12% Similarity=0.131 Sum_probs=63.1
Q ss_pred cccccCceEecc-eEEcC---CcEECCCCEECCCcEECC---CCEECCCcEEeceEE-c---cCCEECCCcEEe-ccEEC
Q 022113 184 LKLATGANIVGN-VLVHE---SAQIGEGCLIGPDVAVGP---GCVVESGVRLSRCTV-M---RGVRIKKHACIS-SSIIG 251 (302)
Q Consensus 184 ~~~~~~~~i~~~-~~i~~---~~~i~~~~~i~~~~~ig~---~~~i~~~~~i~~~~i-~---~~~~i~~~~~i~-~~~i~ 251 (302)
..+.+++.|.++ +.+.. ++.||++|.|++++++.. ++.||++|.|..+.+ . .++.||++|.|+ ++.|.
T Consensus 37 v~Ig~~~~I~~~~~~i~g~~~~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~I~ 116 (215)
T 2wlg_A 37 VYIGNNCKIVSSNIRLKGNNITLFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYEIR 116 (215)
T ss_dssp EEECTTCEEESCEEEEESSSCEEEECTTCEEESEEEEECTTCEEEECTTCEECSEEEEECTTCEEEECTTCEECTTEEEE
T ss_pred EEECCCCEEeCceEEEEcCCCEEEECCCCEECCCeEEEcCCceEEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEEEE
Confidence 345555666555 34433 266666666666666642 366777776664333 2 456667777775 45555
Q ss_pred CC-------------------CEECCCcEEccCcEECCCcEECCceEEcCCeEec
Q 022113 252 WH-------------------STVGQWARVENMTILGEDVHVCDEIYSNGGVVLP 287 (302)
Q Consensus 252 ~~-------------------~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~~ 287 (302)
+. +.||++++|+.+++|.++++||++++|++++++.
T Consensus 117 ~~~~h~~~~~~~~~~~~~~~~v~Igd~v~IG~~~~I~~gv~Ig~~~vIgagsvV~ 171 (215)
T 2wlg_A 117 NTDMHPIYSLENGERINHGKDVIIGNHVWLGRNVTILKGVCIPNNVVVGSHTVLY 171 (215)
T ss_dssp SCCSSCEEETTTCBBCCCCCCEEECTTCEECTTCEECTTCEECSSCEECTTCEEC
T ss_pred CCCCcccccccccccccCCCCeEECCCcEECCCCEECCCCEECCCCEECCCCEEc
Confidence 42 4666667776677777777777777777777654
No 121
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=99.20 E-value=3.3e-11 Score=111.18 Aligned_cols=93 Identities=16% Similarity=0.242 Sum_probs=76.1
Q ss_pred cCceEecceEEcCCcEECCCCEECCCcEECCCCEECCCcEEeceEEccCCEECCCcEEeccEECCC--------------
Q 022113 188 TGANIVGNVLVHESAQIGEGCLIGPDVAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWH-------------- 253 (302)
Q Consensus 188 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~i~~~-------------- 253 (302)
+.+.|++++.+++++.| .++.| .+++||++|.|+. +.|.+++|+++|.|+++++|+++++..+
T Consensus 307 ~~~~i~~~~~i~~~~~i-~~~~I-~~~~Ig~~~~I~~-~~i~~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~ 383 (451)
T 1yp2_A 307 RSAPIYTQPRYLPPSKM-LDADV-TDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAA 383 (451)
T ss_dssp SSSCCCCCCCCCCCEEE-EEEEE-EEEEECTTCEEEE-EEEESCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHT
T ss_pred CCCeeccCCccCCCeEE-cceEE-eCeEECCCCEEcc-eEEeccEECCCCEECCCCEEcCceEECCCCcccccccccccc
Confidence 34555566666666666 66777 5789999999986 8888999999999999999999888777
Q ss_pred -----CEECCCcEEccCcEECCCcEECCceEEcCCe
Q 022113 254 -----STVGQWARVENMTILGEDVHVCDEIYSNGGV 284 (302)
Q Consensus 254 -----~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~ 284 (302)
+.||++++| .+++||++|.||+++++.++.
T Consensus 384 ~g~~~~~Ig~~~~i-~~~~Ig~~~~IG~~~~i~~~~ 418 (451)
T 1yp2_A 384 KGSVPIGIGKNCHI-KRAIIDKNARIGDNVKIINKD 418 (451)
T ss_dssp TTCCCSEECTTCEE-ESEEECTTCEECTTCEECCSS
T ss_pred cCceeEEECCCCEE-eccEeCCCcEECCCCEEeCCc
Confidence 999999998 558888888888888887653
No 122
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=99.19 E-value=3.3e-10 Score=92.83 Aligned_cols=37 Identities=14% Similarity=0.294 Sum_probs=20.4
Q ss_pred ECCCCEECCCcEEccCcEECCCcEECCceEEcCCeEe
Q 022113 250 IGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVL 286 (302)
Q Consensus 250 i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~ 286 (302)
++..+.||++++|+.+++|.++++||++++|+++++|
T Consensus 128 ~~~~v~IGd~v~IG~~a~I~~gv~IG~~~vIgagsvV 164 (203)
T 1krr_A 128 YSFPITIGNNVWIGSHVVINPGVTIGDNSVIGAGSIV 164 (203)
T ss_dssp EECCEEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred eCCCcEECCCeEECCCCEEeCCeEECCCCEECCCCEE
Confidence 3444555555555555555555555555555555554
No 123
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=99.19 E-value=1.5e-10 Score=93.34 Aligned_cols=35 Identities=17% Similarity=0.311 Sum_probs=15.6
Q ss_pred CCCEECCCcEEccCcEECCCcEECCceEEcCCeEe
Q 022113 252 WHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVL 286 (302)
Q Consensus 252 ~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~ 286 (302)
..+.||++++|+.+++|.++++||++++|+++++|
T Consensus 127 ~~v~IG~~v~Ig~~a~I~~gv~IG~~~vIgagsvV 161 (182)
T 1ocx_A 127 KPVTIGNNVWIGGRAVINPGVTIGDNVVVASGAVV 161 (182)
T ss_dssp CCEEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred CCeEEeCCeEECCCCEECCCcEECCCCEECCCCEE
Confidence 34444444444444444444444444444444443
No 124
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=99.18 E-value=4.3e-11 Score=106.20 Aligned_cols=12 Identities=25% Similarity=0.210 Sum_probs=6.1
Q ss_pred CCCChHHHHHcH
Q 022113 24 PLGTAGPLALAR 35 (302)
Q Consensus 24 ~~Gt~~al~~a~ 35 (302)
..|++..+..|+
T Consensus 56 ~~~~~~~~~~~~ 67 (387)
T 2rij_A 56 NFGSAAIMLEAF 67 (387)
T ss_dssp CHHHHHHHHHHH
T ss_pred hcchHHHHHHHH
Confidence 345555455554
No 125
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=99.17 E-value=1.3e-10 Score=97.57 Aligned_cols=150 Identities=15% Similarity=0.258 Sum_probs=95.4
Q ss_pred HHhhcCCcEEEEEecCCC-CCChHHHHHcHhhhccCCCCcEEEEeCCeecCcC-HHHHHHHHHHcCCcEEEEEEeC---C
Q 022113 7 EFEAKLGIKIICSQETEP-LGTAGPLALARDKLIDDTGEPFFVLNSDVISEYP-FAEMIEFHKAHGGEASIMVTKV---D 81 (302)
Q Consensus 7 ~~~~~~g~~i~~~~~~~~-~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~~~~-l~~~~~~~~~~~~~~~l~~~~~---~ 81 (302)
.+.+.++.++.++.++.+ +|++++++.+++.+. +++++++||+.++.+ +.++++ .. . + ++... .
T Consensus 75 ~~~~~~~~~~~~v~~~~~~~g~~~~i~~a~~~~~----~~~lv~~~D~p~~~~~~~~l~~----~~-~-~-~~~~~~~~~ 143 (232)
T 2xme_A 75 AFLKDKGFNYKIVRHDRPEKGNGYSLLVAKNHVE----DRFILTMGDHVYSQQFIEKAVR----GE-G-V-IADREPRFV 143 (232)
T ss_dssp HHHTTSCCCEEEEECSCGGGCHHHHHHTTGGGCC----SSEEEEETTEEECHHHHHHHTT----CC-E-E-EEESSCSSS
T ss_pred HHHHhcCCcEEEEECCCCCCCcHHHHHHHHHHCC----CCEEEEcCCcccCHHHHHHHHh----CC-C-c-EEEcccccc
Confidence 334557778888887654 899999999999884 579999999976544 333333 21 2 2 22221 1
Q ss_pred CCCCcceEEEeCCCCcEEEEEecCCCCCCCeEEEEEEEeCHhhHhhccCCCCCccccchHHHHhcCcEEEEEec-CeeEe
Q 022113 82 EPSKYGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALEGKLFAMVLP-GFWMD 160 (302)
Q Consensus 82 ~~~~~g~v~~d~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~v~~~~~~-g~~~d 160 (302)
++..++.+..+ +|+++.|.++|. ..++.++|+|++++++|+.++.....- ...+..+++.+++..+..+ ++|.|
T Consensus 144 ~~~~~~~v~~~--~g~v~~~~~~~~--~~~~~~~g~~~~~~~~~~~l~~~~~~g-~~~l~~ll~~~~v~~~~~~~~~~~d 218 (232)
T 2xme_A 144 DIGEATKIRVE--DGRVAKIGKDLR--EFDCVDTGFFVLDDSIFEHAEKLRDRE-EIPLSEIVKLARLPVTYVDGELWMD 218 (232)
T ss_dssp CTTTSCEEEEE--TTEEEEEETTCS--SCSEEEEEEEEECTTHHHHHGGGTTSS-CCCHHHHHHHHTCBEEECCSCCEEE
T ss_pred CCCcceEEEEc--CCEEEEeecCCC--CcceEEEEEEEECHHHHHHHHHHHhcC-hhHHHHHHHcCCEEEEEECCCCEEe
Confidence 34456777665 689999998874 346789999999999998775321100 1124445555566666665 68999
Q ss_pred cCChHHHHHHHH
Q 022113 161 IGQPRDYITGLR 172 (302)
Q Consensus 161 igt~~~~~~a~~ 172 (302)
++||++|.+++.
T Consensus 219 I~tpeDl~~a~~ 230 (232)
T 2xme_A 219 VDTKEDVRRANR 230 (232)
T ss_dssp EECC--------
T ss_pred CCCHHHHHHHHh
Confidence 999999987754
No 126
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=99.16 E-value=2.7e-10 Score=96.93 Aligned_cols=34 Identities=9% Similarity=0.014 Sum_probs=24.7
Q ss_pred cEECCCCEECCCcEEccCcEECCCcEECCceEEc
Q 022113 248 SIIGWHSTVGQWARVENMTILGEDVHVCDEIYSN 281 (302)
Q Consensus 248 ~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~ 281 (302)
++||++|+||++++|.++++||++++||++++|.
T Consensus 190 ~~IGd~v~IGaga~Il~gv~IG~~a~IGagsvV~ 223 (267)
T 1ssq_A 190 PKVREGVMIGAGAKILGNIEVGKYAKIGANSVVL 223 (267)
T ss_dssp CEECTTCEECTTCEEESSCEECTTCEECTTCEEC
T ss_pred eEECCCeEEcCCCEEeCCcEECCCCEECCCCEEc
Confidence 5677777777777777777777777777777654
No 127
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=99.16 E-value=1.6e-10 Score=99.07 Aligned_cols=78 Identities=19% Similarity=0.186 Sum_probs=59.0
Q ss_pred ccCceEecceEEcCCcEEC--CCCEECCCcEECCCCEECCCcEEec---------eEEccCCEECCCcEEe-ccEECCCC
Q 022113 187 ATGANIVGNVLVHESAQIG--EGCLIGPDVAVGPGCVVESGVRLSR---------CTVMRGVRIKKHACIS-SSIIGWHS 254 (302)
Q Consensus 187 ~~~~~i~~~~~i~~~~~i~--~~~~i~~~~~ig~~~~i~~~~~i~~---------~~i~~~~~i~~~~~i~-~~~i~~~~ 254 (302)
..++.|++++.||+++.|+ .+++|++++.||++|.|+.+++|.. ++|+++|.||.++.|. +++||++|
T Consensus 162 ~~gi~I~p~a~IG~~v~I~hg~gvvIG~~~~IGd~v~I~~gvtIg~~~~~~~~r~~~IGd~v~IGaga~Il~gv~IG~~a 241 (287)
T 3mc4_A 162 IFQTDIHPAARLGSGLFLDHATGLVVGETAVVEDNVSILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGNIQVGQCS 241 (287)
T ss_dssp HTCCEECTTCEECSSCEEESCTTCEECTTCEECSSCEEETTCEEEC-----CCCSCEECTTCEECTTCEEESSCEECTTC
T ss_pred ccCeEECCCCEECCCeEEccCCCeEECCCeEECCCCEEcCCCEEcCCcccCCCcCCEECCCCEECCCCEECCCcEECCCC
Confidence 3456677777777777776 6777777778888888887777764 6889999999888884 47788888
Q ss_pred EECCCcEEcc
Q 022113 255 TVGQWARVEN 264 (302)
Q Consensus 255 ~i~~~~~i~~ 264 (302)
.||+++.|..
T Consensus 242 ~IGagsvV~k 251 (287)
T 3mc4_A 242 KIAAGSVVLK 251 (287)
T ss_dssp EECTTCEECS
T ss_pred EECCCCEEcc
Confidence 8888877754
No 128
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=99.16 E-value=1.9e-10 Score=99.76 Aligned_cols=75 Identities=28% Similarity=0.348 Sum_probs=41.9
Q ss_pred cCceEecceEEcCCcEE--CCCCEECCCcEECCCCEECCCcEEec-e-----------------EEccCCEECCCcEEe-
Q 022113 188 TGANIVGNVLVHESAQI--GEGCLIGPDVAVGPGCVVESGVRLSR-C-----------------TVMRGVRIKKHACIS- 246 (302)
Q Consensus 188 ~~~~i~~~~~i~~~~~i--~~~~~i~~~~~ig~~~~i~~~~~i~~-~-----------------~i~~~~~i~~~~~i~- 246 (302)
.++.|++++.|++++.| +.+++|+++++||++|.|+.+++|.. + +|+++|.||++++|.
T Consensus 189 ~gv~I~p~a~IG~~v~I~hg~gvvIG~~~~IG~~v~I~~gvtIg~~~~~~~~~g~~i~~~~~~~~IGd~V~IGaga~Il~ 268 (310)
T 3f1x_A 189 TGIDIHPGAQIGHHFTIDHGTGVVIGATSIIGNNVKLYQGVTLGAKSFPLDNNGNPIKGIPRHPILEDDVIVYSNATILG 268 (310)
T ss_dssp HSCEECTTCEECSSCEEESCTTCEECTTCEECSSCEEETTCEEECC--------------CCSCEECTTCEECTTCEEES
T ss_pred CCcEECCCCEECCCcEECCCCCeEECCceEEcCCCEECCCCEECCCccccccccccccCCCCCCEECCCcEEcCCCEECC
Confidence 44556666666666666 55666666666666666666666652 2 456666666555553
Q ss_pred ccEECCCCEECCCcEE
Q 022113 247 SSIIGWHSTVGQWARV 262 (302)
Q Consensus 247 ~~~i~~~~~i~~~~~i 262 (302)
+++||+++.||++++|
T Consensus 269 gv~IGd~a~IGagsvV 284 (310)
T 3f1x_A 269 RVTIGKGATVGGNIWV 284 (310)
T ss_dssp SCEECTTCEECSSCEE
T ss_pred CcEECCCCEECCCCEE
Confidence 3444444444444444
No 129
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=99.14 E-value=7.2e-10 Score=89.95 Aligned_cols=101 Identities=17% Similarity=0.241 Sum_probs=51.3
Q ss_pred ccccCceEecceEE--cCCcEECCCCEECCCc--------EECCCCEECCCcEEe-------------ceEEccCCEECC
Q 022113 185 KLATGANIVGNVLV--HESAQIGEGCLIGPDV--------AVGPGCVVESGVRLS-------------RCTVMRGVRIKK 241 (302)
Q Consensus 185 ~~~~~~~i~~~~~i--~~~~~i~~~~~i~~~~--------~ig~~~~i~~~~~i~-------------~~~i~~~~~i~~ 241 (302)
.+.+++.|.+++.+ +.++.||+++.|++++ +||++|.|+++|.|. ...++..++||+
T Consensus 58 ~ig~~~~I~~~~~~~~g~~~~IG~~~~i~~~~~i~~~~~i~IG~~~~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~ 137 (188)
T 3srt_A 58 SVGKQINVEQNIRCDYGYNIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGD 137 (188)
T ss_dssp BCCSCEEECSCEEESSSTTEEECTTEEECTTEEEECSSCEEECSSCEECTTCEEECEECCSSHHHHHTTEEEECCEEECS
T ss_pred hcCCCCEEcCCEEEEeCCCeEECCcccccCceEEecCCceEECCeeEECCCcEEeeCCccCchhhccccceECCCcEECC
Confidence 34555555554444 2344444444444433 667777777777773 122344555555
Q ss_pred CcEEeccEECCCCEECCCcEEccCcEECCCcEECCceEEcCCeE---ecCcccc
Q 022113 242 HACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVV---LPHKEIK 292 (302)
Q Consensus 242 ~~~i~~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v---~~~~~~~ 292 (302)
+|.| |.++.|.++++|+.+++||.+++|..+ +.++++ .|++.++
T Consensus 138 ~v~I-----G~~~~I~~gv~IG~~~vIgagsvV~~d--vp~~~v~~G~Pa~vi~ 184 (188)
T 3srt_A 138 NVWI-----GGGVIITPGITIGDNVVIGAGSVVTKD--IPPNTVAVGNPCRVIK 184 (188)
T ss_dssp SCEE-----CTTCEECTTCEECSSEEECTTCEECSC--BCSSEEEETTTTEEEE
T ss_pred CcEE-----cCCCEECCCcEECCCCEECCCCEECcc--cCCCCEEEccCCEEec
Confidence 5544 444444444555555555555555554 344443 3555443
No 130
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=99.13 E-value=4.7e-10 Score=96.30 Aligned_cols=76 Identities=17% Similarity=0.210 Sum_probs=50.1
Q ss_pred CceEecceEEcCCcEEC--CCCEECCCcEECCCCEECCCcEEec---------eEEccCCEECCCcEEe-ccEECCCCEE
Q 022113 189 GANIVGNVLVHESAQIG--EGCLIGPDVAVGPGCVVESGVRLSR---------CTVMRGVRIKKHACIS-SSIIGWHSTV 256 (302)
Q Consensus 189 ~~~i~~~~~i~~~~~i~--~~~~i~~~~~ig~~~~i~~~~~i~~---------~~i~~~~~i~~~~~i~-~~~i~~~~~i 256 (302)
+..|++++.|++++.|+ .+++|+++++||++|.|+.+++|.+ ++|+++|.||.++.|. +++||+++.|
T Consensus 157 g~~I~p~a~IG~gv~I~~g~gvvIG~~~~IG~~v~I~~gvtLg~~~~~~~~~~~~IGd~v~IGaga~Ilggv~IG~~a~I 236 (289)
T 1t3d_A 157 QVDIHPAAKIGRGIMLDHATGIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGAKI 236 (289)
T ss_dssp SCEECTTCEECSSCEECSCTTCEECTTCEECSSCEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEESSCEECTTCEE
T ss_pred ceEEcCCCEEcCCEEECCCCceEECCCcEECCCCEEcCCcEECCCccccCCCCeEECCCeEECCCCEEecCcEECCCCEE
Confidence 34555555566666665 3566666677777777777776653 5778888888777773 4667777777
Q ss_pred CCCcEEcc
Q 022113 257 GQWARVEN 264 (302)
Q Consensus 257 ~~~~~i~~ 264 (302)
|+++.+.+
T Consensus 237 GagsvV~~ 244 (289)
T 1t3d_A 237 GAGSVVLQ 244 (289)
T ss_dssp CTTCEECS
T ss_pred CCCCEEcc
Confidence 77776644
No 131
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=99.12 E-value=1e-10 Score=96.94 Aligned_cols=49 Identities=22% Similarity=0.201 Sum_probs=38.7
Q ss_pred eccEECCCCEECCCcEEccCcEECCCcEECCceEEc----CCeE---ecCcccccc
Q 022113 246 SSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSN----GGVV---LPHKEIKSS 294 (302)
Q Consensus 246 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~----~~~v---~~~~~~~~~ 294 (302)
++++||++|+||+++.|.+++.||++|.|+++++|. ++++ .|++.++..
T Consensus 110 g~v~IG~~v~IG~~a~I~~gv~IG~~~iIgagsvV~~dVp~~~vv~G~PAk~i~~~ 165 (212)
T 3eev_A 110 GDTIIGHDVWIGTEAMIMPGVKIGHGAIIASRSVVTKDVAPYEVVGSNPAKHIKFR 165 (212)
T ss_dssp CCEEECSSCEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEEETTTTEEEEES
T ss_pred CCeEECCCCEECCCCEEcCCCEECCCCEECCCCEEccccCCCcEEEecCCEEEecc
Confidence 457889999999999999999999999999998864 4444 477776654
No 132
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=99.12 E-value=3.4e-10 Score=91.58 Aligned_cols=16 Identities=31% Similarity=0.850 Sum_probs=8.5
Q ss_pred CcEECCCCEECCCcEE
Q 022113 213 DVAVGPGCVVESGVRL 228 (302)
Q Consensus 213 ~~~ig~~~~i~~~~~i 228 (302)
.++||++|.|+++|.|
T Consensus 94 ~i~IG~~v~Ig~~v~I 109 (185)
T 2p2o_A 94 EVRIGDHCFIGPGVHI 109 (185)
T ss_dssp CEEECTTCEECTTCEE
T ss_pred ceEECCCcEEeCCCEE
Confidence 3455555555555555
No 133
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=99.07 E-value=5.1e-10 Score=102.30 Aligned_cols=49 Identities=24% Similarity=0.262 Sum_probs=23.3
Q ss_pred cEECCCCEECCCcEEeceEEccCCEECCCcEEeccEECCCCEECCCcEE
Q 022113 214 VAVGPGCVVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARV 262 (302)
Q Consensus 214 ~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~i~~~~~i~~~~~i 262 (302)
++||++|.||++|.|.+|+|+++|.|+++|+|.+++||+++.|++++.|
T Consensus 341 ~~ig~~~~I~~~~~i~~~~i~~~~~i~~~~~i~~~~ig~~~~i~~~~~i 389 (420)
T 3brk_X 341 SLLFTGVRANSYSRLENAVVLPSVKIGRHAQLSNVVIDHGVVIPEGLIV 389 (420)
T ss_dssp CEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEECTTCEECTTCEE
T ss_pred cEEcCCCEECCCCEEcceEEcCCCEECCCCEEeceEECCCCEECCCCEE
Confidence 4444444444444444444444444444444444444444444444444
No 134
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=99.05 E-value=3.8e-10 Score=93.58 Aligned_cols=49 Identities=16% Similarity=0.138 Sum_probs=38.4
Q ss_pred eccEECCCCEECCCcEEccCcEECCCcEECCceEEcC----CeE---ecCcccccc
Q 022113 246 SSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNG----GVV---LPHKEIKSS 294 (302)
Q Consensus 246 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~----~~v---~~~~~~~~~ 294 (302)
++++||++|+||.++.|.+++.||+++.|+++++|.. +++ .|++.++..
T Consensus 117 g~v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~~dv~~~~~~~G~Pa~~i~~r 172 (219)
T 4e8l_A 117 GDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTKNVAPYSIVGGNPLKFIRKR 172 (219)
T ss_dssp CCEEECSSCEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEEETTTTEEEEES
T ss_pred CCcEECCCeEECCCCEEcCCCEECCCCEECCCCEEcccCCCCeEEEecCCEeeccc
Confidence 5688999999999999999999999999999988654 333 366666544
No 135
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.05 E-value=3.2e-09 Score=89.64 Aligned_cols=160 Identities=13% Similarity=0.144 Sum_probs=104.3
Q ss_pred cCCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCe-e-cCcCHHHHHHHHHHc-CCcEEEEEEeCCCCC---
Q 022113 11 KLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDV-I-SEYPFAEMIEFHKAH-GGEASIMVTKVDEPS--- 84 (302)
Q Consensus 11 ~~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~-l-~~~~l~~~~~~~~~~-~~~~~l~~~~~~~~~--- 84 (302)
.+|+++.+..++.+.||++++.. +..+. .+.+++++||. + .+.++.++++.|.+. +.++++++.+. ++.
T Consensus 61 ~~~~~~~~~~~~~~~g~~~~~~~-~~~~~---~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~-~~~~~~ 135 (245)
T 1h7e_A 61 AFGGKAIMTRNDHESGTDRLVEV-MHKVE---ADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHAI-SAAEAA 135 (245)
T ss_dssp HTTCEEEECCSCCSSHHHHHHHH-HHHSC---CSEEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEEEEE-CHHHHT
T ss_pred HcCCeEEeCCCccCCcHHHHHHH-HHhCC---CCEEEEEcCCcCcCCHHHHHHHHHHHHhCCCCCEEEEeecC-CHHHhc
Confidence 35776654445667899776644 44443 36899999999 3 355699999999887 67777777765 211
Q ss_pred CcceE--EEeCCCCcEEEEEecCCC--C----CCCeEEEEEEEeCHhhHhhccCCC-CCc-cccchHHH---HhcCcEEE
Q 022113 85 KYGVV--VMEESTGKVEKFVEKPKL--F----VGNKINAGIYLLNPAVLDRIELRP-TSI-EKEVFPKI---ALEGKLFA 151 (302)
Q Consensus 85 ~~g~v--~~d~~~~~v~~~~ekp~~--~----~~~~~~~Giy~~~~~~l~~l~~~~-~~~-~~~~~~~l---~~~~~v~~ 151 (302)
.++.+ ..++ +|++..|.+++.. . ...+.++|+|+|+++.+..+.... ..+ ..+.+..+ ....++.+
T Consensus 136 ~~~~~~~~~~~-~g~~~~~~~~~~~~~r~~~~~~~~~~~g~y~~~~~~l~~~~~~~~~~~~~td~~~~~~~~~~g~~v~~ 214 (245)
T 1h7e_A 136 EPSTVKVVVNT-RQDALYFSRSPIPYPRNAEKARYLKHVGIYAYRRDVLQNYSQLPESMPEQAESLEQLRLMNAGINIRT 214 (245)
T ss_dssp CTTSCEEEECT-TCBEEEEESSCSSCCTTGGGCCEEEEEEEEEEEHHHHHHGGGSCCCHHHHHHTCTTHHHHHTTCCEEE
T ss_pred CCCCcEEEECC-CCcEEEeecCCCCCCcccccCceeEEEEEEEcCHHHHHHHHhCCCCccccchhhHHHHHHHCCCeEEE
Confidence 12222 2243 7899999886432 1 125789999999999875432111 100 01111121 23568999
Q ss_pred EEecCeeEecCChHHHHHHHHHHHH
Q 022113 152 MVLPGFWMDIGQPRDYITGLRLYLD 176 (302)
Q Consensus 152 ~~~~g~~~digt~~~~~~a~~~~l~ 176 (302)
+..+++|.|+++|++|..+...+..
T Consensus 215 ~~~~~~~~dIdtp~Dl~~a~~~l~~ 239 (245)
T 1h7e_A 215 FEVAATGPGVDTPACLEKVRALMAQ 239 (245)
T ss_dssp EECCCCCCCSSSHHHHHHHHHHHHH
T ss_pred EEeCCCCCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999998876544
No 136
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=99.01 E-value=5.4e-10 Score=93.02 Aligned_cols=40 Identities=10% Similarity=0.083 Sum_probs=33.3
Q ss_pred ECCCCEECCCcEEccCcEECCCcEECCceEEcCCeEecCc
Q 022113 250 IGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHK 289 (302)
Q Consensus 250 i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~~~~ 289 (302)
+..++.||++|+|+.+++|.++++||++++|+++++|...
T Consensus 116 ~~g~v~IG~~v~IG~~a~I~~gv~IG~gavIgagsvV~~d 155 (220)
T 4hur_A 116 LKGDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTKN 155 (220)
T ss_dssp CCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEECSC
T ss_pred ccCCeEECCCcEECCCCEEeCCCEECCCCEEcCCCEEccc
Confidence 4567789999999888999999999999999888887544
No 137
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.99 E-value=5e-10 Score=92.30 Aligned_cols=82 Identities=13% Similarity=0.104 Sum_probs=51.8
Q ss_pred cEECCCCEECCCcEECCCCEECCCcEEec---eE-----EccCCEECCC----------cEE-eccEECCCCEECCCcEE
Q 022113 202 AQIGEGCLIGPDVAVGPGCVVESGVRLSR---CT-----VMRGVRIKKH----------ACI-SSSIIGWHSTVGQWARV 262 (302)
Q Consensus 202 ~~i~~~~~i~~~~~ig~~~~i~~~~~i~~---~~-----i~~~~~i~~~----------~~i-~~~~i~~~~~i~~~~~i 262 (302)
+.+...+.+++.++||++|.|++++.|.. .+ .++.+.++++ +.+ ++++||++|+||.++.|
T Consensus 49 ~~i~~~~~i~~~v~IG~~~~Ig~gv~I~~~~~~h~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~v~Ig~~v~IG~~a~I 128 (209)
T 1mr7_A 49 QILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTIIGNDVWIGKDVVI 128 (209)
T ss_dssp GEESCCGGGCCCEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTGGGGCCCGGGSCCCCCEEECSSCEECTTCEE
T ss_pred eEEeeccccCCCEEECCCCEEcCCCEEEeCCCcccccCccccceEECCcccccccccccccccCCcEECCCCEEcCCCEE
Confidence 34444444555667777777777776621 11 1111222222 222 45788999999999999
Q ss_pred ccCcEECCCcEECCceEEcCC
Q 022113 263 ENMTILGEDVHVCDEIYSNGG 283 (302)
Q Consensus 263 ~~~~~i~~~~~v~~~~~v~~~ 283 (302)
.+++.||+++.|++++++..+
T Consensus 129 ~~gv~Ig~~~~Igags~V~~~ 149 (209)
T 1mr7_A 129 MPGVKIGDGAIVAANSVVVKD 149 (209)
T ss_dssp CTTCEECTTCEECTTCEECSC
T ss_pred cCCCEECCCCEEcCCCEEcCC
Confidence 888999999999988886543
No 138
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=98.90 E-value=3.5e-09 Score=97.68 Aligned_cols=123 Identities=19% Similarity=0.247 Sum_probs=89.7
Q ss_pred hhHHHHHhhcCCcEEEEEecC------------------------CCCCChHHHHH--c---HhhhccCCCCcEEEEeCC
Q 022113 2 LNFLKEFEAKLGIKIICSQET------------------------EPLGTAGPLAL--A---RDKLIDDTGEPFFVLNSD 52 (302)
Q Consensus 2 ~~~~~~~~~~~g~~i~~~~~~------------------------~~~Gt~~al~~--a---~~~i~~~~~~~~lv~~gD 52 (302)
++|+++ ...+|+++.|+.|+ +|+||||++.. + ++.+.....+.++|++||
T Consensus 157 ~~~~~~-~~~fg~~i~~f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngD 235 (488)
T 2i5k_A 157 EHLIKK-YSANRIRIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGD 235 (488)
T ss_dssp HHHHGG-GCSSSCEEEEECCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTT
T ss_pred HHHHHh-ccccCceEEEEEeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCC
Confidence 456666 45678999999888 89999999984 3 455522224799999999
Q ss_pred eecC-cCHHHHHHHHHHcCCcEEEEEEeCCCCCC-cceEEEeCCCCc--EEEEEecCCCC--------CCCeEEEEEEEe
Q 022113 53 VISE-YPFAEMIEFHKAHGGEASIMVTKVDEPSK-YGVVVMEESTGK--VEKFVEKPKLF--------VGNKINAGIYLL 120 (302)
Q Consensus 53 ~l~~-~~l~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~v~~d~~~~~--v~~~~ekp~~~--------~~~~~~~Giy~~ 120 (302)
++.. .|+. ++..|.++++++++.+.+.+++.. ||.+..+ +|+ ++++.|.|... .-...|+|+|+|
T Consensus 236 nL~~~~d~~-~L~~~~~~~a~~t~~v~~~~~p~~~yG~Iv~~--dG~~~iVE~~e~~~e~~~~~~~~~~~~~~Ntgi~~f 312 (488)
T 2i5k_A 236 NLGATVDLK-ILNHMIETGAEYIMELTDKTRADVKGGTLISY--DGQVRLLEVAQVPKEHIDEFKNIRKFTNFNTNNLWI 312 (488)
T ss_dssp BSSCCCCHH-HHHHHHHSCCSEEEEEEECCGGGSSSCEEEEE--TTEEEEECGGGSCTTSHHHHTCTTTCCEEEEEEEEE
T ss_pred cCCCcccHH-HHHHHHhcCCcEEEEEEEecCCCCceeEEEEE--CCcEEEEEeccCCHHHHhhcccccccCEEEEEEEEE
Confidence 9775 5776 668888999999999998887764 9988765 455 33333344321 135789999999
Q ss_pred CHhhHhhc
Q 022113 121 NPAVLDRI 128 (302)
Q Consensus 121 ~~~~l~~l 128 (302)
+.+++..+
T Consensus 313 ~~~~L~~~ 320 (488)
T 2i5k_A 313 NLKAVKRL 320 (488)
T ss_dssp EHHHHHHH
T ss_pred eHHHHHHH
Confidence 99888654
No 139
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.84 E-value=1e-08 Score=84.48 Aligned_cols=83 Identities=14% Similarity=0.187 Sum_probs=56.9
Q ss_pred CCcEECCCCEECCCcEEe--ce--EEccC---------------CEECCCcEE-eccEECCCCEECCCcEEccCcEECCC
Q 022113 212 PDVAVGPGCVVESGVRLS--RC--TVMRG---------------VRIKKHACI-SSSIIGWHSTVGQWARVENMTILGED 271 (302)
Q Consensus 212 ~~~~ig~~~~i~~~~~i~--~~--~i~~~---------------~~i~~~~~i-~~~~i~~~~~i~~~~~i~~~~~i~~~ 271 (302)
+.+.||++|.|+++|+|. .. +..++ +.+++++.+ +.++||++|+||.++.|.+++.||++
T Consensus 55 ~~i~IG~~~~Ig~~v~i~~~g~~~h~~~~~s~~p~~~~~~~~~~~~i~~~~~~~~~v~IG~~v~IG~~a~I~~gv~Ig~~ 134 (212)
T 1xat_A 55 DKLVIGSFCSIGSGAAFIMAGNQGHRAEWASTFPFHFMHEEPAFAGAVNGYQPAGDTLIGHEVWIGTEAMFMPGVRVGHG 134 (212)
T ss_dssp CCEEECSSCEECTTCEEECSTTTTCCTTSSCCSCGGGCCSCGGGGGCCCCCCCCCCEEECTTCEECTTCEECTTCEECTT
T ss_pred cCEEEcCCCEECCCCEEEeCCCCccccccccccceeeecccccccccccCceecCCeEECCCCEECCCCEEeCCCEECCC
Confidence 466788888888888762 11 22211 233445555 35889999999999999999999999
Q ss_pred cEECCceEEcCC----eE---ecCcccccc
Q 022113 272 VHVCDEIYSNGG----VV---LPHKEIKSS 294 (302)
Q Consensus 272 ~~v~~~~~v~~~----~v---~~~~~~~~~ 294 (302)
+.|+++++|..+ ++ .|++.++.+
T Consensus 135 ~~IgagsvV~~~vp~~~~~~G~Pa~~i~~~ 164 (212)
T 1xat_A 135 AIIGSRALVTGDVEPYAIVGGNPARTIRKR 164 (212)
T ss_dssp CEECTTCEECSCBCTTEEEETTTTEEEEES
T ss_pred CEECCCCEEcccCCCCcEEEccCCEEEccc
Confidence 999999887543 33 356655543
No 140
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.82 E-value=1.1e-08 Score=84.68 Aligned_cols=38 Identities=8% Similarity=0.065 Sum_probs=21.7
Q ss_pred ECCCCEECCCcEEccCcEECCCcEECCceEEcCCeEec
Q 022113 250 IGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLP 287 (302)
Q Consensus 250 i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~~ 287 (302)
+..++.||++|+|+.+++|.++++||++++|+++++|.
T Consensus 108 ~~g~v~IG~~v~IG~~a~I~~gv~IG~~~iIgagsvV~ 145 (212)
T 3eev_A 108 RSGDTIIGHDVWIGTEAMIMPGVKIGHGAIIASRSVVT 145 (212)
T ss_dssp CCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred cCCCeEECCCCEECCCCEEcCCCEECCCCEECCCCEEc
Confidence 34455566666665556666666666666665555543
No 141
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.74 E-value=3.2e-08 Score=81.99 Aligned_cols=38 Identities=11% Similarity=0.056 Sum_probs=29.8
Q ss_pred CCCCEECCCcEEccCcEECCCcEECCceEEcCCeEecC
Q 022113 251 GWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPH 288 (302)
Q Consensus 251 ~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~~~ 288 (302)
..++.||++++|+.+++|.++++||++++|+++++|..
T Consensus 116 ~g~v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~~ 153 (219)
T 4e8l_A 116 KGDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTK 153 (219)
T ss_dssp CCCEEECSSCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred cCCcEECCCeEECCCCEEcCCCEECCCCEECCCCEEcc
Confidence 44577888888888888888888888888888887653
No 142
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.72 E-value=2.7e-08 Score=81.91 Aligned_cols=33 Identities=12% Similarity=0.184 Sum_probs=15.2
Q ss_pred CEECCCcEEccCcEECCCcEECCceEEcCCeEe
Q 022113 254 STVGQWARVENMTILGEDVHVCDEIYSNGGVVL 286 (302)
Q Consensus 254 ~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~ 286 (302)
+.||++++|+.+++|.++++||++++|++++++
T Consensus 114 v~Ig~~v~IG~~a~I~~gv~Ig~~~~Igags~V 146 (209)
T 1mr7_A 114 TIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVV 146 (209)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred cEECCCCEEcCCCEEcCCCEECCCCEEcCCCEE
Confidence 444444444444444444444444444444443
No 143
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=98.70 E-value=6e-09 Score=87.37 Aligned_cols=129 Identities=14% Similarity=0.164 Sum_probs=88.5
Q ss_pred CCCCCChHHHHHcHhhhccCCCCcEEEEeCCe--ecCcCHHHHHHHHHHcCCcEEEEEEeCCCC-CCcceEEEeCCCCcE
Q 022113 22 TEPLGTAGPLALARDKLIDDTGEPFFVLNSDV--ISEYPFAEMIEFHKAHGGEASIMVTKVDEP-SKYGVVVMEESTGKV 98 (302)
Q Consensus 22 ~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~--l~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~g~v~~d~~~~~v 98 (302)
+.+.||+++++.+++.+. +.+++++||+ +.+.++.++++ | +.+.++++.+.+.+++ ..|+.+ .+++
T Consensus 67 ~~~~g~~~~i~~a~~~~~----~~~lv~~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~v 135 (232)
T 2dpw_A 67 PDRGGLLENLEQALEHVE----GRVLVATGDIPHLTEEAVRFVLD-K-APEAALVYPIVPKEAVEARFPRT-----KRTY 135 (232)
T ss_dssp CCCSSHHHHHHHHHHTCC----SEEEEEETTCTTCCHHHHHHHHH-H-CCSCSEEEEEEEHHHHHHHCTTC-----CCCC
T ss_pred cCCCCHHHHHHHHHHHcC----CCEEEEeCCcccCCHHHHHHHHh-c-CCCCCEEEEEeeccchhhhCCCc-----ceeE
Confidence 456899999999999874 6899999999 45666899998 6 5566777777653322 234432 2457
Q ss_pred EEEEecCCCCCCCeEEEEEEEeCHhhHhhccC-----------------------------CCCCccccchHHHHh--cC
Q 022113 99 EKFVEKPKLFVGNKINAGIYLLNPAVLDRIEL-----------------------------RPTSIEKEVFPKIAL--EG 147 (302)
Q Consensus 99 ~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~-----------------------------~~~~~~~~~~~~l~~--~~ 147 (302)
..+.||| .+++|+|+|+++++..+.. +... ..+++..+.. ..
T Consensus 136 ~~~~ek~------~~~~g~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~~~~~~~l~~~~~ge~~-l~~~~~~~~~~~g~ 208 (232)
T 2dpw_A 136 ARLREGT------FTGGNLLLLDKSLFRKALPLARRVVALRKRPLALARLVGWDVLLKLLLGRLS-LAEVEARAQRILGV 208 (232)
T ss_dssp EEETTEE------EEECSEEEEEHHHHTTTHHHHHHHHHTTTCHHHHHHHHCHHHHHHHHHTCCC-HHHHHHHHHHHHSS
T ss_pred EEEecCc------eeeeeEEEEcHHHHHHHHHHHHHHHHhccCHHHHHHHHCHHHHHHHHhccCC-HHHHHHHHHHHhCc
Confidence 7777776 3789999999998866531 1111 1223333332 25
Q ss_pred cEEEEEe--cCeeEecCChHHHH
Q 022113 148 KLFAMVL--PGFWMDIGQPRDYI 168 (302)
Q Consensus 148 ~v~~~~~--~g~~~digt~~~~~ 168 (302)
++..+.. .+.|.|++||++|.
T Consensus 209 ~v~~v~~~~~~~~~dIdtpeDl~ 231 (232)
T 2dpw_A 209 EARALVTPYPEVGVDVDREEDLV 231 (232)
T ss_dssp CEEEEECSCGGGTCCCCSHHHHC
T ss_pred EEEEEecCChhhccCCCChhhcc
Confidence 7777777 46799999999973
No 144
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=98.70 E-value=4.7e-08 Score=90.52 Aligned_cols=125 Identities=18% Similarity=0.201 Sum_probs=93.2
Q ss_pred hhHHHHHhhcCCc---EEEEEecC---------------------CCCCChHHHHHcHh-----hhccCCCCcEEEEeCC
Q 022113 2 LNFLKEFEAKLGI---KIICSQET---------------------EPLGTAGPLALARD-----KLIDDTGEPFFVLNSD 52 (302)
Q Consensus 2 ~~~~~~~~~~~g~---~i~~~~~~---------------------~~~Gt~~al~~a~~-----~i~~~~~~~~lv~~gD 52 (302)
++|+++ .+.+|+ +|.|+.|+ .|+|||+.+..+.. .+.....+.|+|+++|
T Consensus 175 ~~~f~~-~~~fGl~~~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~V~n~D 253 (505)
T 1jv1_A 175 KEFFTK-HKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVD 253 (505)
T ss_dssp HHHHHH-TGGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEETT
T ss_pred HHHHHh-hhhcCCCcCceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEEEEECC
Confidence 466776 667888 49888763 69999999877643 2222223789999999
Q ss_pred ee-cCcCHHHHHHHHHHcCCcEEEEEEe-CCCCCCcceEEEeCCCCc--EEEEEecCCCC----------CCCeEEEEEE
Q 022113 53 VI-SEYPFAEMIEFHKAHGGEASIMVTK-VDEPSKYGVVVMEESTGK--VEKFVEKPKLF----------VGNKINAGIY 118 (302)
Q Consensus 53 ~l-~~~~l~~~~~~~~~~~~~~~l~~~~-~~~~~~~g~v~~d~~~~~--v~~~~ekp~~~----------~~~~~~~Giy 118 (302)
++ ...+...++..|.++++++++.+++ ..++.++|.+..+ +|+ ++++.|+|... ..+..|+|+|
T Consensus 254 n~L~~~~d~~~lg~~~~~~~~~~~~v~~k~~~~e~~Gvl~~~--dg~~~vvEy~E~p~~~~~~~~~~g~~~~~~~N~~~~ 331 (505)
T 1jv1_A 254 NILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRV--DGVYQVVEYSEISLATAQKRSSDGRLLFNAGNIANH 331 (505)
T ss_dssp BTTCCTTCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEE--TTEEEEECGGGSCHHHHHCBCTTSSBSSCEEEEEEE
T ss_pred ccccccchHHHHHHHHHcCCCEEEEEEEccCCccCcceEEEE--CCeEEEEEEeeCCHHHhhhcccccccccceeeEEEE
Confidence 95 7777788999999999999999987 5677899998876 354 45555555410 1368999999
Q ss_pred EeCHhhHhhcc
Q 022113 119 LLNPAVLDRIE 129 (302)
Q Consensus 119 ~~~~~~l~~l~ 129 (302)
+|+.++++.+.
T Consensus 332 ~f~l~~L~~i~ 342 (505)
T 1jv1_A 332 FFTVPFLRDVV 342 (505)
T ss_dssp EEEHHHHHHHH
T ss_pred EecHHHHHHHH
Confidence 99999887664
No 145
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=98.66 E-value=8.7e-08 Score=79.89 Aligned_cols=147 Identities=10% Similarity=0.099 Sum_probs=96.2
Q ss_pred hcCCcEEEEEecC----CCCCChHHHHHcHhhhccCCCCcEEEEeCCe-ec-CcCHHHHHHHHHHcCCcEEEEEEeCCC-
Q 022113 10 AKLGIKIICSQET----EPLGTAGPLALARDKLIDDTGEPFFVLNSDV-IS-EYPFAEMIEFHKAHGGEASIMVTKVDE- 82 (302)
Q Consensus 10 ~~~g~~i~~~~~~----~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~-l~-~~~l~~~~~~~~~~~~~~~l~~~~~~~- 82 (302)
+.+|+++ +..+. ...|++++++.++..+.. ..+.++++.||. +. +.++.++++.|.+.+.++++.+.+..+
T Consensus 62 ~~~~~~~-~~~~~~~~~~~~g~~~sv~~~l~~~~~-~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 139 (228)
T 1ezi_A 62 KNFGVEV-VLRPAELASDTASSISGVIHALETIGS-NSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMEHH 139 (228)
T ss_dssp HHTTCEE-EECCC------CHHHHHHHHHHHHHTC-CSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEEEECSSC
T ss_pred HHcCCEE-EeCchHHcCCCCChHHHHHHHHHHhCC-CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEEEEecCCC
Confidence 3467776 33322 356778999999998842 126789999998 33 466899998887766678888887766
Q ss_pred CCCcceEEEeCCCCcEEEEEe-c---CCC---CCCCeEEEEEEEeCHhhHhhccCCCCCccccchHHHHhcCcEEEEEec
Q 022113 83 PSKYGVVVMEESTGKVEKFVE-K---PKL---FVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALEGKLFAMVLP 155 (302)
Q Consensus 83 ~~~~g~v~~d~~~~~v~~~~e-k---p~~---~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~v~~~~~~ 155 (302)
|..+.. .++ +|++..|.+ + +.. ......++|+|+++++.+.... .+ ...++..+..+
T Consensus 140 p~~~~~--~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~giy~~~~~~l~~~~--------~~-----~g~~v~~~~~~ 203 (228)
T 1ezi_A 140 PLKTLL--QIN-NGEYAPMRHLSDLEQPRQQLPQAFRPNGAIYINDTASLIANN--------CF-----FIAPTKLYIMS 203 (228)
T ss_dssp TTSCEE--ECC---CEEESSCHHHHTCCGGGSCCEEEEEEEEEEEEHHHHHHHT--------SS-----CCSSCEEEECC
T ss_pred cceeeE--EcC-CCcEeeccccccccCCcccCchhheeeeEEEEEeHHHHhhCC--------cc-----cCCceEEEEeC
Confidence 444333 354 688888876 2 111 1123567899999988764421 11 14566666665
Q ss_pred -CeeEecCChHHHHHHHHHH
Q 022113 156 -GFWMDIGQPRDYITGLRLY 174 (302)
Q Consensus 156 -g~~~digt~~~~~~a~~~~ 174 (302)
.+|.||+||++|..+...+
T Consensus 204 ~~~~~dIdtpeDl~~a~~~l 223 (228)
T 1ezi_A 204 HQDSIDIDTELDLQQAENIL 223 (228)
T ss_dssp TGGGCCCCSHHHHHHHHHHH
T ss_pred cccccCCCCHHHHHHHHHHH
Confidence 5899999999998886544
No 146
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.62 E-value=2e-07 Score=76.77 Aligned_cols=39 Identities=8% Similarity=0.050 Sum_probs=26.3
Q ss_pred ECCCCEECCCcEEccCcEECCCcEECCceEEcCCeEecC
Q 022113 250 IGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPH 288 (302)
Q Consensus 250 i~~~~~i~~~~~i~~~~~i~~~~~v~~~~~v~~~~v~~~ 288 (302)
+...+.||++++|+.+++|.++++||++++|+++++|..
T Consensus 107 ~~~~v~IG~~v~IG~~a~I~~gv~Ig~~~~IgagsvV~~ 145 (212)
T 1xat_A 107 PAGDTLIGHEVWIGTEAMFMPGVRVGHGAIIGSRALVTG 145 (212)
T ss_dssp CCCCEEECTTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred ecCCeEECCCCEECCCCEEeCCCEECCCCEECCCCEEcc
Confidence 334566777777777777777777777777777776654
No 147
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=98.42 E-value=3.6e-07 Score=76.25 Aligned_cols=146 Identities=9% Similarity=0.036 Sum_probs=87.2
Q ss_pred hcCCcEEEEEec----CCCCCChHHHHHcHhhhccCCCCcEEEEeCCe-ec-CcCHHHHHHHHHHcCCcEEEEEEeCCCC
Q 022113 10 AKLGIKIICSQE----TEPLGTAGPLALARDKLIDDTGEPFFVLNSDV-IS-EYPFAEMIEFHKAHGGEASIMVTKVDEP 83 (302)
Q Consensus 10 ~~~g~~i~~~~~----~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~-l~-~~~l~~~~~~~~~~~~~~~l~~~~~~~~ 83 (302)
+.+|+++.+-.+ +.. +..++++.++..+.. .+.+++++||. +. ..++.++++.|.+.+++.++.+.+..+|
T Consensus 61 ~~~g~~~~~~~~~~~~~~~-~~~~~v~~al~~~~~--~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~~~~~~p 137 (229)
T 1qwj_A 61 KQFGAQVHRRSSETSKDSS-TSLDAIVEFLNYHNE--VDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVVRRHQF 137 (229)
T ss_dssp HHTTCEEEECCGGGSSTTC-CHHHHHHHHHTTCTT--CSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEEEEECCC
T ss_pred HHcCCEEEeChhhhcCCCC-cHHHHHHHHHHhcCC--CCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEEeeccCh
Confidence 446777632221 122 223788888887732 36799999998 44 4569999999988777766655555566
Q ss_pred CCcceEEEeCCCCcEEE--EEec----CCC--CCCCeEEEEEEEeCHhhHhhccCCCCCccccchHHHHhcCcEEEEEec
Q 022113 84 SKYGVVVMEESTGKVEK--FVEK----PKL--FVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALEGKLFAMVLP 155 (302)
Q Consensus 84 ~~~g~v~~d~~~~~v~~--~~ek----p~~--~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~v~~~~~~ 155 (302)
..++.. +. ...+.. +.++ +.. +.....++|+|+|++++| +. .+ .....+..+..+
T Consensus 138 ~~~~v~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~n~giY~~~~~~l--~~----~~--------~~g~~~~~~~~~ 200 (229)
T 1qwj_A 138 RWSEIQ--KG-VREVTEPLNLNPAKRPRRQDWDGELYENGSFYFAKRHLI--EM----GY--------LQGGKMAYYEMR 200 (229)
T ss_dssp EECCCC--SS-TTCCCCBSSSBTTBCCCTTTSCCEEEEEEEEEEEEHHHH--HT----TC--------SSCSSEEEEECC
T ss_pred hHhhcc--cc-ccccccccccccccccCCCCCCceEEEeeEEEEEEHHHh--cc----cc--------ccCCeEEEEECC
Confidence 555431 20 000111 1111 111 123467999999999988 11 01 112334321444
Q ss_pred -CeeEecCChHHHHHHHHHHH
Q 022113 156 -GFWMDIGQPRDYITGLRLYL 175 (302)
Q Consensus 156 -g~~~digt~~~~~~a~~~~l 175 (302)
++|.||++|++|..++..+.
T Consensus 201 ~~~~~dIdt~~Dl~~a~~~~~ 221 (229)
T 1qwj_A 201 AEHSVDIDVDIDWPIAEQRVL 221 (229)
T ss_dssp GGGCCCHHHHCSHHHHHHHHH
T ss_pred cccccCCCCHHHHHHHHHHHH
Confidence 68999999999999977654
No 148
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=98.35 E-value=1.8e-06 Score=71.43 Aligned_cols=148 Identities=16% Similarity=0.099 Sum_probs=93.3
Q ss_pred CcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCe-ecC-cCHHHHHHHHHHcCCcEEEEEEeCCCCCCcceEE
Q 022113 13 GIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDV-ISE-YPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVV 90 (302)
Q Consensus 13 g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~-l~~-~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~v~ 90 (302)
+..+.++.+. .+++++++.|+..+.. .+.++++.||+ +.+ .++.++++.|. ...+.++.+.+..++..+
T Consensus 67 ~~~v~~~~~~--~~~~~~i~~al~~~~~--~~~vlv~~~D~P~~~~~~i~~l~~~~~-~~~~~~i~~~~~~d~~~~---- 137 (223)
T 2xwl_A 67 GEDSVIVSGG--VDRTESVALALEAAGD--AEFVLVHDAARALTPPALIARVVAALK-EGHSAVVPGLAPADTIKA---- 137 (223)
T ss_dssp BTTEEEEECC--SSHHHHHHHHHTTCTT--CSEEEECCTTCTTCCHHHHHHHHHHHH-HTCSEEEEEECCSSCEEE----
T ss_pred cCCeEEEcCC--CCHHHHHHHHHHhcCC--CCEEEEEcCCcccCCHHHHHHHHHHHh-hcCCeEEEEEecccceEE----
Confidence 3445666553 3578999999988721 25678889998 444 46899999883 234566666666555333
Q ss_pred EeCCCCcEEEEEecCCCCCCCeEEEEEEEeCHhhHhhccCCC-CCccccchHHHHh-cCcEEEEEecCeeEecCChHHHH
Q 022113 91 MEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRP-TSIEKEVFPKIAL-EGKLFAMVLPGFWMDIGQPRDYI 168 (302)
Q Consensus 91 ~d~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~-~~~~~~~~~~l~~-~~~v~~~~~~g~~~digt~~~~~ 168 (302)
.++ +|++..+.|++.. ......++|+++.+..+.... .....+....+.. ..++..+..+++|+||+||++|.
T Consensus 138 ~~~-~g~~~~~~e~~~l----~~~~~p~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~dIdtpeDl~ 212 (223)
T 2xwl_A 138 VDA-NGAVLGTPERAGL----RAVQTPQGFHADVLRRAYARATAGGVTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLV 212 (223)
T ss_dssp ECT-TSBEEECCCGGGE----EEECSCEEEEHHHHHHHHTTCCSCCCCCHHHHHHTTTCCCEEEECCGGGCCCCSHHHHH
T ss_pred EcC-CCcEEeecChHHh----eeeeCCcccCHHHHHHHHHHhhCCCCccHHHHHHHcCCCEEEEECCcccccccCHHHHH
Confidence 253 6888888887632 111235788887765443221 1111222222222 35677777788999999999998
Q ss_pred HHHHHH
Q 022113 169 TGLRLY 174 (302)
Q Consensus 169 ~a~~~~ 174 (302)
.+...+
T Consensus 213 ~a~~~l 218 (223)
T 2xwl_A 213 LAEAVL 218 (223)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 886654
No 149
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=98.13 E-value=6.6e-06 Score=68.51 Aligned_cols=137 Identities=7% Similarity=-0.041 Sum_probs=86.3
Q ss_pred CCChHHHHHcHhhhcc--C--CCCcEEEEeCCe-ec-CcCHHHHHHHHHHcCCcEEEEEEeCCCCCCcceEEEeCCCC-c
Q 022113 25 LGTAGPLALARDKLID--D--TGEPFFVLNSDV-IS-EYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVMEESTG-K 97 (302)
Q Consensus 25 ~Gt~~al~~a~~~i~~--~--~~~~~lv~~gD~-l~-~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~v~~d~~~~-~ 97 (302)
.|++++++.++..+.. . ..+.++++.||+ +. ..++.++++.|.+.++ .+++.+..++ +..++ +| +
T Consensus 84 ~~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~--~~~~~~~~~~-----~~~~~-~g~~ 155 (236)
T 2vsh_A 84 ADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDA--VDTVVEAVDT-----IVEST-NGQF 155 (236)
T ss_dssp SSHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSE--EEEEEECCSC-----EEECS-SSSB
T ss_pred CchHHHHHHHHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCc--EEEEEecccc-----EEEeC-CCCe
Confidence 5788899999888731 1 125678889999 54 4569999999987654 3455555554 22233 57 7
Q ss_pred EEEEEecCCCCCCCeEEEEEEEeCHhhHhh-ccCCCC-Cc--cccchHHHHh-cCcEEEEEecCeeEecCChHHHHHHHH
Q 022113 98 VEKFVEKPKLFVGNKINAGIYLLNPAVLDR-IELRPT-SI--EKEVFPKIAL-EGKLFAMVLPGFWMDIGQPRDYITGLR 172 (302)
Q Consensus 98 v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~-l~~~~~-~~--~~~~~~~l~~-~~~v~~~~~~g~~~digt~~~~~~a~~ 172 (302)
+..+.+++.. ......++|+++.+.. ++.... .. ..+.+..+.. ..++..+..+++|+||+||++|..++.
T Consensus 156 ~~~~~~~~~~----~~~~~p~~f~~~~l~~~~~~~~~~g~~~~~~~~~~l~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~ 231 (236)
T 2vsh_A 156 ITDIPNRAHL----YQGQTPQTFRCKDFMDLYGSLSDEEKEILTDACKIFVIKGKDVALAKGEYSNLKITTVTDLKIAKS 231 (236)
T ss_dssp CCBCCCGGGE----EEEEEEEEEEHHHHHHHHHTCCHHHHHHCCSHHHHHHHTTCCEEEEECCTTCCCCCSHHHHHHHHH
T ss_pred eeeecChHHh----eeecCCcEecHHHHHHHHHHHHhcCCCcCCCHHHHHHHcCCCEEEEECCccccCcCCHHHHHHHHH
Confidence 7777776522 1112478899887753 332110 00 0111223333 357888887889999999999988865
Q ss_pred H
Q 022113 173 L 173 (302)
Q Consensus 173 ~ 173 (302)
.
T Consensus 232 ~ 232 (236)
T 2vsh_A 232 M 232 (236)
T ss_dssp H
T ss_pred H
Confidence 4
No 150
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=97.93 E-value=6.3e-05 Score=62.23 Aligned_cols=153 Identities=10% Similarity=0.141 Sum_probs=89.7
Q ss_pred HHhhcCCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCe-ec-CcCHHHHHHHHHHcCCcEEEEEEeCCCCC
Q 022113 7 EFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDV-IS-EYPFAEMIEFHKAHGGEASIMVTKVDEPS 84 (302)
Q Consensus 7 ~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~-l~-~~~l~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (302)
.+...++.++.++.++ .|..++++.+++.+..+ .+.++++.||. +. +.++.++++.|.+.+ .++++.+..+.
T Consensus 65 ~~~~~~~~~v~~~~~~--~~~~~sv~~al~~~~~~-~~~vl~~d~d~P~~~~~~i~~l~~~~~~~~--~~i~~~~~~~~- 138 (228)
T 2yc3_A 65 EYEESIDVDLSFAIPG--KERQDSVYSGLQEIDVN-SELVCIHDSARPLVNTEDVEKVLKDGSAVG--AAVLGVPAKAT- 138 (228)
T ss_dssp TTTTTSSSEEEEECCC--SSHHHHHHHHHTTSCTT-CSEEEEEETTCTTCCHHHHHHHHHHHHHHS--EEEEEEECCSC-
T ss_pred HHHHhCCCcEEEECCC--CCHHHHHHHHHHhhccC-CCEEEEecCCCccCCHHHHHHHHHHHHhcC--ceEEEEeccce-
Confidence 3444566678777642 58889999999988531 25677889997 44 456899999887654 34445554432
Q ss_pred CcceEEEeCCCCcEEEEEecCCCCCCCeEEEEEEEeCHhhH-hhcc---CCCCCccccchHHHHh-cCcEEEEEecCeeE
Q 022113 85 KYGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVL-DRIE---LRPTSIEKEVFPKIAL-EGKLFAMVLPGFWM 159 (302)
Q Consensus 85 ~~g~v~~d~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l-~~l~---~~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~ 159 (302)
+..+++ ++.+..+.+++ ...... ..|+|+++.+ +.++ .....+ .+....+.+ ..++.....+..|+
T Consensus 139 ---~~~~~~-~~~v~~~~~~~---~~~~~~-~~~~f~~~~l~~~~~~~~~~~~~~-~~~~~~l~~~g~~v~~~~~~~~~~ 209 (228)
T 2yc3_A 139 ---IKEVNS-DSLVVKTLDRK---TLWEMQ-TPQVIKPELLKKGFELVKSEGLEV-TDDVSIVEYLKHPVYVSQGSYTNI 209 (228)
T ss_dssp ---CCCBCT-TSCBCCCCSCC---CCEEEE-EEEEECHHHHHHHHHHHHHHTCCC-CSTTHHHHHSSSCCEEEECCTTCC
T ss_pred ---EEEEcC-CCceEEecCcc---ceEEEe-CCcEEEHHHHHHHHHHHHhcCCCc-ccHHHHHHHcCCceEEEeCCcccc
Confidence 112232 34454332222 112333 4899998655 3332 112222 233333333 34565444456799
Q ss_pred ecCChHHHHHHHHHH
Q 022113 160 DIGQPRDYITGLRLY 174 (302)
Q Consensus 160 digt~~~~~~a~~~~ 174 (302)
||+||++|..+...+
T Consensus 210 dIdtpeDl~~a~~~l 224 (228)
T 2yc3_A 210 KVTTPDDLLLAERIL 224 (228)
T ss_dssp CCCSHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHH
Confidence 999999998886544
No 151
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=97.83 E-value=2.9e-05 Score=65.28 Aligned_cols=151 Identities=9% Similarity=0.026 Sum_probs=93.0
Q ss_pred EEEEEecCCCCCChHHHHHcHhhhcc----CCCCcEEEEeCCe--ecCcCHHHHHHHHHHcCCcEEEEEEeCCCCCCcce
Q 022113 15 KIICSQETEPLGTAGPLALARDKLID----DTGEPFFVLNSDV--ISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGV 88 (302)
Q Consensus 15 ~i~~~~~~~~~Gt~~al~~a~~~i~~----~~~~~~lv~~gD~--l~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~ 88 (302)
.+.++.. +.+..++++++++.+.. ...+.++++.||. +.+..+.++++.|.+.++ .+++.+..+ .+
T Consensus 75 ~~~~~~~--~~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a--~i~~~~~~d----~i 146 (246)
T 3f1c_A 75 RIVVIEG--GEDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGA--VDTVIEALD----TI 146 (246)
T ss_dssp TEEEEEC--CSSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSE--EEEEEECSS----CE
T ss_pred CEEEECC--CCchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcCC--EEEEEeccc----eE
Confidence 4555543 34678899999998853 1136789999998 445669999999988764 344455444 34
Q ss_pred EEEeCCCCcEEEEEecCCCCCCCeEEEEEEEeCHhhH-hhccCCCCC---ccccchHHHHh-cCcEEEEEecCeeEecCC
Q 022113 89 VVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVL-DRIELRPTS---IEKEVFPKIAL-EGKLFAMVLPGFWMDIGQ 163 (302)
Q Consensus 89 v~~d~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l-~~l~~~~~~---~~~~~~~~l~~-~~~v~~~~~~g~~~digt 163 (302)
+..++ ++.+....+++.. +..-..++|+.+.| +.++.-... ...+....+.+ ..++..+..+.+|++|++
T Consensus 147 ~~~~~-~~~v~~~~~r~~l----~~~qtpq~f~~~~L~~a~~~~~~~~~~~~TD~~~~~~~~g~~v~~v~~~~~~~~Itt 221 (246)
T 3f1c_A 147 VESSN-HEVITDIPVRDHM----YQGQTPQSFNMKKVFNHYQNLTPEKKQILTDACKICLLAGDDVKLVKGEIFNIKITT 221 (246)
T ss_dssp EECSS-SSBCCBCCCGGGE----EEEEEEEEEEHHHHHHHHHTSCHHHHHHCCCHHHHHHHTTCCCEEEECCTTCCCCCS
T ss_pred EEecC-CCeEEEecChHHh----hhhcCCceeEHHHHHHHHHHHHHcCCCccCcHHHHHHHcCCCEEEEeCCCCccCcCC
Confidence 44432 4566655556531 12224578886655 333221000 01122222333 357888888889999999
Q ss_pred hHHHHHHHHHHHHhh
Q 022113 164 PRDYITGLRLYLDSL 178 (302)
Q Consensus 164 ~~~~~~a~~~~l~~~ 178 (302)
|+++..++..+..+.
T Consensus 222 ~~Dl~~ae~~l~~~~ 236 (246)
T 3f1c_A 222 PYDLKVANAIIQERI 236 (246)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhccc
Confidence 999999988775443
No 152
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=97.81 E-value=4.2e-05 Score=70.58 Aligned_cols=106 Identities=16% Similarity=0.159 Sum_probs=73.6
Q ss_pred CCCCCChHHHHHc-----HhhhccCCCCcEEEEeCCeecC-cCHHHHHHHHHHcCCcEEEEEEeCCCC-CCcceEEEeC-
Q 022113 22 TEPLGTAGPLALA-----RDKLIDDTGEPFFVLNSDVISE-YPFAEMIEFHKAHGGEASIMVTKVDEP-SKYGVVVMEE- 93 (302)
Q Consensus 22 ~~~~Gt~~al~~a-----~~~i~~~~~~~~lv~~gD~l~~-~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~g~v~~d~- 93 (302)
..|.|||+++..+ ++.+.....+.++|.++|.+.. .|+ .++..|.++++++++.+.+..++ ..+|++..+.
T Consensus 186 ~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL~~~~D~-~llg~~~~~~ad~~~~v~~k~~~d~~~Gvl~~~~~ 264 (505)
T 2oeg_A 186 WAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNLGATIDK-RVLAYMEKEKIDFLMEVCRRTESDKKGGHLARQTV 264 (505)
T ss_dssp EECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCTTCCCCH-HHHHHHHHHTCSEEEEEEECCTTCCSSEEEEEEEE
T ss_pred cCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCccccccCH-HHHHHHHhcCCcEEEEEEEecCCccceeEEEEecc
Confidence 3467999998755 3433222237899999999874 567 89999999999999999988776 5788887731
Q ss_pred ----CCCc-------E--EEEEecCCCC--------CCCeEEEEEEEeCHhhHhhc
Q 022113 94 ----STGK-------V--EKFVEKPKLF--------VGNKINAGIYLLNPAVLDRI 128 (302)
Q Consensus 94 ----~~~~-------v--~~~~ekp~~~--------~~~~~~~Giy~~~~~~l~~l 128 (302)
.+|+ + +++.|-|... .-.+.|++..+|+-+++..+
T Consensus 265 ~~~~~dg~~nvEyn~~~llEyse~p~e~~~~~~g~~~f~~~Ninn~~~~l~~l~~~ 320 (505)
T 2oeg_A 265 YVKGKDGQPDAEKRVLLLRESAQCPKADMESFQDINKYSFFNTNNLWIRLPVLLET 320 (505)
T ss_dssp EECCSSSCCCEEEEEEEEEEGGGSCGGGHHHHHCTTTTCEEEEEEEEEEHHHHHHH
T ss_pred cccccCCccccccCceeEEEeccCChhhhhcccCccccCeeEEEEEEEEHHHHHHH
Confidence 2566 3 3333334321 12357899999998877544
No 153
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=97.74 E-value=0.00016 Score=59.77 Aligned_cols=145 Identities=14% Similarity=0.098 Sum_probs=84.1
Q ss_pred EEEEEecCCCCCChHHHHHcHhhhccC----CCCcEEEEeCCe-ecC-cCHHHHHHHHHHcCCcEEEEEEeCCCCCCcce
Q 022113 15 KIICSQETEPLGTAGPLALARDKLIDD----TGEPFFVLNSDV-ISE-YPFAEMIEFHKAHGGEASIMVTKVDEPSKYGV 88 (302)
Q Consensus 15 ~i~~~~~~~~~Gt~~al~~a~~~i~~~----~~~~~lv~~gD~-l~~-~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~ 88 (302)
.+.++ ....|++++++.++..+... ..+.++++.||. +.+ ..+.++++.|.+.+.. .+++.+..++.
T Consensus 74 ~i~~~--~~~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~~~-~~~~~~~~~~~---- 146 (231)
T 1vgw_A 74 VRVWK--NGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEG-GILAVPVADTL---- 146 (231)
T ss_dssp SEEEC--CCCSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCTTC-EEEEEECCSCE----
T ss_pred ceEEE--cCCCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCe-EEEEeecccce----
Confidence 35554 34679999999999887320 136789999998 444 4588999988665422 34455544431
Q ss_pred EEEeCCCCcEEEEEecCCCCCCCeEEEEEEEeCHhhHhhc-cCCC-CCccccchHHHHh-cCcEEEEEecCeeEecCChH
Q 022113 89 VVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRI-ELRP-TSIEKEVFPKIAL-EGKLFAMVLPGFWMDIGQPR 165 (302)
Q Consensus 89 v~~d~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l-~~~~-~~~~~~~~~~l~~-~~~v~~~~~~g~~~digt~~ 165 (302)
...+ +|++....++ .. .+.....++|+.+.|..+ .... ..+ .+....+.. ..++..+..++.|+||+||+
T Consensus 147 -~~~~-~g~i~~~~~~---~~-~~~~~~p~~f~~~~l~~~~~~~~~~g~-~~~~~~~~~~~~~v~~v~~~~~~~dIdtpe 219 (231)
T 1vgw_A 147 -KRAE-SGQISATVDR---SG-LWQAQTPQLFQAGLLHRALAAENLGGI-TDEASAVEKLGVRPLLIQGDARNLKLTQPQ 219 (231)
T ss_dssp -EEES-SSBEEEEECC---TT-EEEEEEEEEEEHHHHHHHHHC----CC-CSHHHHHHTTTCCCEEEECCTTCCCCCSHH
T ss_pred -EEeC-CCceEecCCh---HH-heeeeCCcEecHHHHHHHHHHHhhcCC-CcHHHHHHHcCCCEEEEECCccccCcCCHH
Confidence 1222 4555543332 11 122224889998877543 2211 111 111111111 35677777778899999999
Q ss_pred HHHHHHHH
Q 022113 166 DYITGLRL 173 (302)
Q Consensus 166 ~~~~a~~~ 173 (302)
+|..+...
T Consensus 220 Dl~~a~~~ 227 (231)
T 1vgw_A 220 DAYIVRLL 227 (231)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99887653
No 154
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=97.63 E-value=0.0014 Score=52.54 Aligned_cols=124 Identities=14% Similarity=0.120 Sum_probs=77.0
Q ss_pred CCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCee--cCcCHHHHHHHHHHcCCcEEEEEEeCCCCCCcceE
Q 022113 12 LGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVI--SEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVV 89 (302)
Q Consensus 12 ~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l--~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~v 89 (302)
.|+++.+ .+....|++++++.++..+.. ..+.++++.||+. ...++.++++. +.++++++...
T Consensus 67 ~~~~~~~-~~~~~~g~~~~i~~al~~~~~-~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~~~~~~~----------- 131 (199)
T 2waw_A 67 DGLDIVL-VDDAGLGCSSSLKSALTWVDP-TAEGIVLMLGDQPGITASAVASLIAG--GRGATIAVCEY----------- 131 (199)
T ss_dssp TTSEEEE-CCCCCTTCCCHHHHHHHTSCT-TCSEEEEEETTCTTCCHHHHHHHHHH--HTTCSEEEEEE-----------
T ss_pred CCCEEEE-CCCcccCHHHHHHHHHHhhhc-cCCeEEEEeCCcccCCHHHHHHHHhh--cCCCCEEEEec-----------
Confidence 4666544 244567999999999998832 1368999999993 35558888876 44444332211
Q ss_pred EEeCCCCcEEEEEecCCCCCCCeEEEEEEEeCHhhHhhccCCCCCccccchHHHHhc--CcEEEEEe-cCeeEecCChHH
Q 022113 90 VMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALE--GKLFAMVL-PGFWMDIGQPRD 166 (302)
Q Consensus 90 ~~d~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~l~~~--~~v~~~~~-~g~~~digt~~~ 166 (302)
+++- . .-++|+++.+..+.....+ .-...++.+ .++..+.. +++|.||+||++
T Consensus 132 -----~g~~----~------------~P~~~~~~~l~~~~~~~~~---~~~~~~l~~~~~~v~~~~~~~~~~~dIdtpeD 187 (199)
T 2waw_A 132 -----ANGI----G------------HPFWVSRGVFGDLAELHGD---KGVWRLIESGRHGVRRIRVDADVPLDVDTWDD 187 (199)
T ss_dssp -----TTEE----E------------EEEEEEGGGHHHHHTCSST---TCHHHHHHSSSSCEEEEECSSCCCCCCSSHHH
T ss_pred -----CCcc----c------------CCEEEcHHHHHHHHhcCCC---HHHHHHHHhCcccEEEEEcCcccccCCCCHHH
Confidence 1110 0 1247888888766532111 113344444 35666666 468999999999
Q ss_pred HHHHHHHH
Q 022113 167 YITGLRLY 174 (302)
Q Consensus 167 ~~~a~~~~ 174 (302)
|..+...+
T Consensus 188 l~~~~~~~ 195 (199)
T 2waw_A 188 YERLLASV 195 (199)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98886644
No 155
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=97.61 E-value=0.00019 Score=64.22 Aligned_cols=127 Identities=21% Similarity=0.252 Sum_probs=91.4
Q ss_pred hhHHHHHhhcCCc---EEEEEec---------------------CCCCCChHHHHHcH-----hhhccCCCCcEEEEeCC
Q 022113 2 LNFLKEFEAKLGI---KIICSQE---------------------TEPLGTAGPLALAR-----DKLIDDTGEPFFVLNSD 52 (302)
Q Consensus 2 ~~~~~~~~~~~g~---~i~~~~~---------------------~~~~Gt~~al~~a~-----~~i~~~~~~~~lv~~gD 52 (302)
++|+++ .+.+|+ +|.|+.| ..|.|+|+.+.... +.+....-+.+.+.+.|
T Consensus 109 ~~~f~~-~~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gieyi~v~nvD 187 (405)
T 3oc9_A 109 NNYFKE-HQYFGLSSEQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKYSVAHNVD 187 (405)
T ss_dssp HHHHHH-TGGGGSCTTSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEECTT
T ss_pred HHHHHh-CcccCCCccceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEEEEEEeCC
Confidence 467777 566777 4887664 45899999877643 22222222577888889
Q ss_pred e-ecCcCHHHHHHHHHHcCCcEEEEEEeCCCC-CCcceEEEeCCCCcEEEEEecCCCC---------CCCeEEEEEEEeC
Q 022113 53 V-ISEYPFAEMIEFHKAHGGEASIMVTKVDEP-SKYGVVVMEESTGKVEKFVEKPKLF---------VGNKINAGIYLLN 121 (302)
Q Consensus 53 ~-l~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~g~v~~d~~~~~v~~~~ekp~~~---------~~~~~~~Giy~~~ 121 (302)
. +.......++..|.++++++++-+++..++ .+.|.+...+...+|+++.|.|... .-+..|.++++|+
T Consensus 188 N~L~~~~Dp~~lg~~~~~~~d~~~kvv~k~~~dek~Gvl~~~dg~~~vvEysei~~e~e~~~~~g~l~fn~~Ni~~h~fs 267 (405)
T 3oc9_A 188 NILCKDVDPNMIGYMDLLQSEICIKIVKKGFKEEKVGVLVKEQERIKVVEYTELTDELNKQLSNGEFIYNCGHISINGYS 267 (405)
T ss_dssp BTTCCSSCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEETTEEEEECGGGCCTTTTCBCTTSCBSSCEEEEEEEEEE
T ss_pred CcccccCCHHHHHHHHHcCCCEEEEEEECCCCCCccceEEEECCeeEEEEEeeCCHHHhhcCCCCceeeccceeEeeecC
Confidence 9 888888899999999999999999988766 7788887542233677777766531 1246788999999
Q ss_pred HhhHhhcc
Q 022113 122 PAVLDRIE 129 (302)
Q Consensus 122 ~~~l~~l~ 129 (302)
.++++.+.
T Consensus 268 ~~fL~~i~ 275 (405)
T 3oc9_A 268 TSFLEKAA 275 (405)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhh
Confidence 99997664
No 156
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=97.35 E-value=0.0025 Score=51.07 Aligned_cols=121 Identities=13% Similarity=0.129 Sum_probs=71.1
Q ss_pred CCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCe-ec-CcCHHHHHHHHHHcCCcEEEEEEeCCCCCCcceE
Q 022113 12 LGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDV-IS-EYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVV 89 (302)
Q Consensus 12 ~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~-l~-~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~v 89 (302)
+++++.+ .+....|++++++.++..+.. ..+.++++.||+ +. +..+.++++. +.+.++++...
T Consensus 67 ~~~~~~~-~~~~~~g~~~~i~~al~~~~~-~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~i~~~~~----------- 131 (197)
T 2wee_A 67 DGTDVVV-VEDVERGCAASLRVALARVHP-RATGIVLMLGDQPQVAPATLRRIIDV--GPATEIMVCRY----------- 131 (197)
T ss_dssp TTSEEEE-CC----CCHHHHHHHHTTSCT-TEEEEEEEETTCTTCCHHHHHHHHHH--GGGSSEEEEEE-----------
T ss_pred CCCEEEE-CCCcccCHHHHHHHHHHHhcc-cCCeEEEEeCCcCCCCHHHHHHHHhh--cCCCCEEEEec-----------
Confidence 4665543 233457999999999998731 126799999999 44 4558888876 33334322111
Q ss_pred EEeCCCCcEEEEEecCCCCCCCeEEEEEEEeCHhhHhhccCCCCCccccchHHHHhc--CcEEEEEe-cCeeEecCChHH
Q 022113 90 VMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALE--GKLFAMVL-PGFWMDIGQPRD 166 (302)
Q Consensus 90 ~~d~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~l~~~--~~v~~~~~-~g~~~digt~~~ 166 (302)
+|+. .. -++|++++|..+..... ..-+..+++. .++..+.. +++|.|++||++
T Consensus 132 -----~g~~----~~------------P~~~~~~~l~~l~~~~~---~~~~~~~l~~~~~~v~~v~~~~~~~~dIdtpeD 187 (197)
T 2wee_A 132 -----ADGV----GH------------PFWFSRTVFGELARLHG---DKGVWKLVHSGRHPVRELAVDGCVPLDVDTWDD 187 (197)
T ss_dssp -----TTEE----EE------------EEEEEGGGHHHHHTCCS---TTHHHHHHHCTTSCEEEEECSSCCCCCCSSHHH
T ss_pred -----CCCc----CC------------CEEECHHHHHHHHhCCC---ChhHHHHHHhCcccEEEEEcCcccccCCCCHHH
Confidence 1211 01 13788888877652111 1123344444 35666665 468999999999
Q ss_pred HHHHH
Q 022113 167 YITGL 171 (302)
Q Consensus 167 ~~~a~ 171 (302)
|..+.
T Consensus 188 l~~~~ 192 (197)
T 2wee_A 188 YRRLL 192 (197)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 97764
No 157
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=97.30 E-value=0.0023 Score=51.32 Aligned_cols=115 Identities=19% Similarity=0.240 Sum_probs=66.8
Q ss_pred EEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCe--ecCcCHHHHHHHHHH-----cCCcEEEEEEeCCCCCCcc
Q 022113 15 KIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDV--ISEYPFAEMIEFHKA-----HGGEASIMVTKVDEPSKYG 87 (302)
Q Consensus 15 ~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~--l~~~~l~~~~~~~~~-----~~~~~~l~~~~~~~~~~~g 87 (302)
.+.++. ....|++++++.++..+ . +.++++.||+ +.+..+.++++.|.+ .+.+.++.+.+.....
T Consensus 69 ~~~~~~-~~~~g~~~si~~al~~~-~---~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~--- 140 (196)
T 3rsb_A 69 NIVVID-TSGKGYIEDLNECIGYF-S---EPFLVVSSDLINLKSKIINSIVDYFYCIKAKTPDVEALAVMIPKEKYP--- 140 (196)
T ss_dssp EEEE---------CCCCCTTTTTC-S---SCEEEEETTEESCCHHHHHHHHHHHHHHHTTCC--CEEEEEEETTTCC---
T ss_pred CEEEEE-CCCCCcHHHHHHHHHhC-C---CCEEEEeCCcccCCHHHHHHHHHHHHhhhcccCCCceEEEEEEccccC---
Confidence 555543 45789999999999987 3 7999999999 445669999999986 5556666666653221
Q ss_pred eEEEeCCCCcEEEEEecCCCCCCCeEEEEEEEeCHhhHhhccCCCCCccccchHHHHhcCcEEEEEecCeeEecCChHHH
Q 022113 88 VVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDY 167 (302)
Q Consensus 88 ~v~~d~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~v~~~~~~g~~~digt~~~~ 167 (302)
.|......+..+++..++.+. .......+.+++...||+||++|
T Consensus 141 ----------------~~~~~~~~~~~~~l~~l~~~~--------------------~~~~~~~~~~~~~~~DIDt~eDl 184 (196)
T 3rsb_A 141 ----------------NPSIDFNGLVPADINVVSPKH--------------------GYQKEEIMVIDELIFNINTKDDL 184 (196)
T ss_dssp ----------------SCSCCSSSEEEEEEEEECSCS--------------------SCCCEEEEECSSCCEECCSHHHH
T ss_pred ----------------CCCeeeccccceeeEEecCCC--------------------CcceeEEEEecceEEecCCHHHH
Confidence 222111233344555554322 01122233444667899999999
Q ss_pred HHHHHH
Q 022113 168 ITGLRL 173 (302)
Q Consensus 168 ~~a~~~ 173 (302)
..+...
T Consensus 185 ~~ae~l 190 (196)
T 3rsb_A 185 KLAEML 190 (196)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 887643
No 158
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=97.23 E-value=0.00065 Score=62.60 Aligned_cols=124 Identities=16% Similarity=0.180 Sum_probs=83.8
Q ss_pred hhHHHHHhhcCCc---EEEEEecC----------------------CCCCChHHHHHcH-----hhhccCCCCcEEEEeC
Q 022113 2 LNFLKEFEAKLGI---KIICSQET----------------------EPLGTAGPLALAR-----DKLIDDTGEPFFVLNS 51 (302)
Q Consensus 2 ~~~~~~~~~~~g~---~i~~~~~~----------------------~~~Gt~~al~~a~-----~~i~~~~~~~~lv~~g 51 (302)
++|+++ .+.+|+ +|.++.|+ .|.|+|+.+.... +.+....-+.+.+.+.
T Consensus 178 ~~~~~~-~~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v~~v 256 (486)
T 2yqc_A 178 ESFFIE-NNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYCV 256 (486)
T ss_dssp HHHHHH-TGGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEEET
T ss_pred HHHHhh-ccccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcHHHHHhcCCeEEEEECC
Confidence 466766 556776 35555543 5889999886553 2221212366777888
Q ss_pred Ceec--CcCHHHHHHHHHHcCCcEEEEEEeCCCC-CCcceEEEeCCCC--cEEEEEecCCC------C------CCCeEE
Q 022113 52 DVIS--EYPFAEMIEFHKAHGGEASIMVTKVDEP-SKYGVVVMEESTG--KVEKFVEKPKL------F------VGNKIN 114 (302)
Q Consensus 52 D~l~--~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~g~v~~d~~~~--~v~~~~ekp~~------~------~~~~~~ 114 (302)
|.+. ..| ..++..|.++++++++.+++..++ .+.|.+...+.+| +++++.|+|.. . ..+..|
T Consensus 257 DN~l~~~~D-p~~lg~~~~~~~~~~~~vv~k~~~~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~~~~~~~~~~~~~~~~N 335 (486)
T 2yqc_A 257 DNCLVKVAD-PIFIGFAIAKKFDLATKVVRKRDANESVGLIVLDQDNQKPCVIEYSEISQELANKKDPQDSSKLFLRAAN 335 (486)
T ss_dssp TBTTCCTTC-HHHHHHHHHHTCSEEEEEEECCSTTCCCCEEEEETTTTEEEEECGGGSCHHHHHCEETTEEEEESSCEEE
T ss_pred CCceeeccC-HHHHHHHHHcCCCEEEEEEEcCCCCCceeEEEEEecCCCEEEEEEecCCHHHhhccccccccccccccee
Confidence 9744 345 457888989999999988887544 6788877542234 47777777732 1 236889
Q ss_pred EEEEEeCHhhHhh
Q 022113 115 AGIYLLNPAVLDR 127 (302)
Q Consensus 115 ~Giy~~~~~~l~~ 127 (302)
+|+|+|+.++++.
T Consensus 336 i~~~~~~l~~L~~ 348 (486)
T 2yqc_A 336 IVNHYYSVEFLNK 348 (486)
T ss_dssp EEEEEEEHHHHHH
T ss_pred EEEEEEeHHHHHH
Confidence 9999999999876
No 159
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=97.19 E-value=0.00078 Score=56.07 Aligned_cols=141 Identities=12% Similarity=0.034 Sum_probs=82.8
Q ss_pred EEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCe-ecC-cCHHHHHHHHHHcCCcEEEEEEeCCCCCCcceEEEeC
Q 022113 16 IICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDV-ISE-YPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVMEE 93 (302)
Q Consensus 16 i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~-l~~-~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~v~~d~ 93 (302)
+.++.+ ..|+..+++.++..+.. +.+++++||. +.+ ..+.++++.+.+.+ ..+.+.+..++..+ .+
T Consensus 84 v~~~~~--~~~~~~~i~~al~~~~~---~~vlv~~~D~P~~~~~~i~~l~~~~~~~~--~~i~~~~~~~~~~~----~~- 151 (236)
T 2px7_A 84 AVFLEG--GATRQASVARLLEAASL---PLVLVHDVARPFVSRGLVARVLEAAQRSG--AAVPVLPVPDTLMA----PE- 151 (236)
T ss_dssp CEEEEC--CSSHHHHHHHHHHHCCS---SEEEECCTTCCCCCHHHHHHHHHHHHHHS--EEEEEEECCSEEEE----EC-
T ss_pred cEEEeC--CCchHHHHHHHHHHcCC---CeEEEecCccccCCHHHHHHHHHHHHhcC--CeEEEEecCCcEEE----ec-
Confidence 344443 24678899999988752 6789999997 544 45889998887653 34444554443221 22
Q ss_pred CCCcEEEEEecCCCCCCCeEEEEEEEeCHhhHhh-ccC---CCCCccccchHHHH-hcCcEEEEEecCeeEecCChHHHH
Q 022113 94 STGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDR-IEL---RPTSIEKEVFPKIA-LEGKLFAMVLPGFWMDIGQPRDYI 168 (302)
Q Consensus 94 ~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~-l~~---~~~~~~~~~~~~l~-~~~~v~~~~~~g~~~digt~~~~~ 168 (302)
+|++..+.+++.. .... ..++|+++.|.. ++. ....+ .+....+. ...++..+..++.|.||+||++|.
T Consensus 152 -~G~v~~~~~~~~~---~~~~-~~~~f~~~~l~~~~~~~~~~g~~~-~d~~~ll~~~~~~v~~v~~~~~~~dIdtpeDl~ 225 (236)
T 2px7_A 152 -GEAYGRVVPREAF---RLVQ-TPQGFFTALLREAHAYARRKGLEA-SDDAQLVQALGYPVALVEGEATAFKITHPQDLV 225 (236)
T ss_dssp -SSSCEEEECGGGC---EEEC-SCEEEEHHHHHHHHHHHHHHTCCC-SSHHHHHHHTTCCCEEEECCTTCCCCCSHHHHH
T ss_pred -CCeEEecCChHhh---cccc-CCeEEcHHHHHHHHHHHHhcCCCc-hhHHHHHHHcCCcEEEEECCccccCCCCHHHHH
Confidence 5777766654321 1122 356778776633 221 01111 11111111 134677777778999999999998
Q ss_pred HHHHHH
Q 022113 169 TGLRLY 174 (302)
Q Consensus 169 ~a~~~~ 174 (302)
.+...+
T Consensus 226 ~a~~~l 231 (236)
T 2px7_A 226 LAEALA 231 (236)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 886544
No 160
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=97.17 E-value=0.0029 Score=52.26 Aligned_cols=133 Identities=10% Similarity=0.050 Sum_probs=75.1
Q ss_pred ChHHHHHcHhhhccCCCCcEEEEeCCe-ecC-cCHHHHHHHHHHcCCcEEEEEEeCCCCCCcceEEEeCCCCcEEEEEec
Q 022113 27 TAGPLALARDKLIDDTGEPFFVLNSDV-ISE-YPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVMEESTGKVEKFVEK 104 (302)
Q Consensus 27 t~~al~~a~~~i~~~~~~~~lv~~gD~-l~~-~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~v~~d~~~~~v~~~~ek 104 (302)
..++++.++..+.....+.++++.||. +.+ ..+.++++.+.+.+ ..+++.+..++ +...++ +| + .+.++
T Consensus 91 ~~~sv~~al~~~~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~~--~~i~~~~~~~~----~~~~~~-~g-v-~~~~r 161 (234)
T 1vpa_A 91 RSQSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARETG--AATLALKNSDA----LVRVEN-DR-I-EYIPR 161 (234)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEEEETTSCCCCHHHHHHHHHHHHHHS--EEEEEEECCSE----EEEEET-TE-E-EEECC
T ss_pred HHHHHHHHHHHhhhcCCCEEEEecCcccCCCHHHHHHHHHHHHhcC--CEEEEEecCCc----EEEECC-CC-c-ccCCh
Confidence 556788888877320124567788998 554 45889998887653 33444444332 223343 45 5 55543
Q ss_pred CCCCCCCeE-EEEEEEeCHhhHhhccCCCCCccccchHHHHh-cCcEEEEEecCeeEecCChHHHHHHHHHH
Q 022113 105 PKLFVGNKI-NAGIYLLNPAVLDRIELRPTSIEKEVFPKIAL-EGKLFAMVLPGFWMDIGQPRDYITGLRLY 174 (302)
Q Consensus 105 p~~~~~~~~-~~Giy~~~~~~l~~l~~~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~digt~~~~~~a~~~~ 174 (302)
. .+. .-..++|+.+.+..+-...... .+....+.. ..++..+..++.|.||+||++|..+...+
T Consensus 162 ~-----~~~~~~~p~~f~~~~l~~~~~~~~~~-~~~~~~~~~~g~~v~~v~~~~~~~dIdtpeDl~~a~~~l 227 (234)
T 1vpa_A 162 K-----GVYRILTPQAFSYEILKKAHENGGEW-ADDTEPVQKLGVKIALVEGDPLCFKVTFKEDLELARIIA 227 (234)
T ss_dssp T-----TEEEEEEEEEEEHHHHHHHHTTCCCC-SSSHHHHHTTTCCCEEEECCGGGCCCCSTTHHHHHHHHH
T ss_pred h-----HeeeecCCccccHHHHHHHHHhcCCC-CcHHHHHHHcCCcEEEEECCchhcCCCCHHHHHHHHHHH
Confidence 1 222 1134578887765442221111 111111211 34566666667899999999998887644
No 161
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=97.08 E-value=0.00087 Score=54.29 Aligned_cols=112 Identities=13% Similarity=0.048 Sum_probs=63.3
Q ss_pred EEEec-CCCCCChHHHHHcHhhhccCCCCcEEEEeCCe-ecCcC-HHH-HHHHHHHcCCcEEEEEEeCCCCCCcceEEEe
Q 022113 17 ICSQE-TEPLGTAGPLALARDKLIDDTGEPFFVLNSDV-ISEYP-FAE-MIEFHKAHGGEASIMVTKVDEPSKYGVVVME 92 (302)
Q Consensus 17 ~~~~~-~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~-l~~~~-l~~-~~~~~~~~~~~~~l~~~~~~~~~~~g~v~~d 92 (302)
+++.+ ....|++++++.+++.+.. +.+++++||+ +.+.+ +.+ ++ + .++++ ...
T Consensus 73 ~~v~~~~~~~g~~~~i~~al~~~~~---~~~lv~~~D~P~i~~~~i~~~l~----~--~~~~v--------------~~~ 129 (201)
T 2e8b_A 73 PVVLDEFEESASIIGLYTALKHAKE---ENVFVLSGDLPLMKKETVLYVLE----N--FKEPV--------------SVA 129 (201)
T ss_dssp CEEECCCSSCCHHHHHHHHHHHCSS---SEEEEEETTCTTCCHHHHHHHHH----T--CCSSE--------------EEE
T ss_pred eEEecCCCCCCcHHHHHHHHHHcCC---CCEEEEeCCcCcCCHHHHHHHHh----c--CCEEE--------------Eec
Confidence 34443 3568999999999998853 7899999999 33443 555 54 1 12211 111
Q ss_pred CCCCcEEEEEecCCCCCCCeEEEEEEEeCHhhHhhccC----CCCCccccchHHHHhcCcEEEEEec--CeeE--ecCCh
Q 022113 93 ESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIEL----RPTSIEKEVFPKIALEGKLFAMVLP--GFWM--DIGQP 164 (302)
Q Consensus 93 ~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~----~~~~~~~~~~~~l~~~~~v~~~~~~--g~~~--digt~ 164 (302)
+|+ .....|+| |++++++.++. +... +..+++..++..+..+ +.|. |++||
T Consensus 130 --~g~-------------~~p~~giy-~~~~~~~~l~~~~~~g~~~-----~~~~l~~~~~~~~~~~~~~~~~~~dintp 188 (201)
T 2e8b_A 130 --KTE-------------KLHTLVGV-YSKKLLEKIEERIKKGDYR-----IWALLKDVGYNEVEIPEELRYTLLNMNTK 188 (201)
T ss_dssp --ESS-------------SEEEEEEE-EEGGGHHHHHHHHHTTCCC-----HHHHHHHHCCEEEECCGGGGGGGCCSCCC
T ss_pred --CCc-------------eeeEEEEE-eChhHHHHHHHHHHcCCch-----HHHHHHHCCeEEeccccccchhhcCCCCH
Confidence 111 24578999 99998877642 2222 2233333345555553 5789 99999
Q ss_pred HHHHHHHH
Q 022113 165 RDYITGLR 172 (302)
Q Consensus 165 ~~~~~a~~ 172 (302)
++|.++.+
T Consensus 189 edl~~~~~ 196 (201)
T 2e8b_A 189 EDLKRILA 196 (201)
T ss_dssp --------
T ss_pred HHHHHHHH
Confidence 99987654
No 162
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=96.79 E-value=0.024 Score=46.67 Aligned_cols=145 Identities=10% Similarity=0.055 Sum_probs=81.4
Q ss_pred EEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCe-ecCc-CHHHHHHHHHHcCCcEEEEEEeCCCCCCcceEEEe
Q 022113 15 KIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDV-ISEY-PFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVME 92 (302)
Q Consensus 15 ~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~-l~~~-~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~v~~d 92 (302)
.+.++.+. .|+.++++.++..+.. .+.++++.||. +.+. .+.++++.+.+.+... +.+.+..+. .-..+
T Consensus 75 ~v~~~~~~--~g~~~~i~~al~~~~~--~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~-~~~~~~~~~----~~~~~ 145 (236)
T 1i52_A 75 QITVVDGG--DERADSVLAGLKAAGD--AQWVLVHDAARPCLHQDDLARLLALSETSRTGG-ILAAPVRDT----MKRAE 145 (236)
T ss_dssp TEEEEECC--SSHHHHHHHHHHTSTT--CSEEEECCTTCTTCCHHHHHHHHGGGGTCSSCE-EEEEECCSC----EEEEC
T ss_pred CEEEECCC--CCHHHHHHHHHHhcCC--CCEEEEEcCccccCCHHHHHHHHHHHHhcCCeE-EEEEecccc----EEEEc
Confidence 45555432 5888999999988742 26789999998 4454 4888888776554233 334444332 11223
Q ss_pred CCCCcEEEEEecCCCCCCCeEEE-EEEEeCHhhHh-hccC---CCCCccccchHHHH-hcCcEEEEEecCeeEecCChHH
Q 022113 93 ESTGKVEKFVEKPKLFVGNKINA-GIYLLNPAVLD-RIEL---RPTSIEKEVFPKIA-LEGKLFAMVLPGFWMDIGQPRD 166 (302)
Q Consensus 93 ~~~~~v~~~~ekp~~~~~~~~~~-Giy~~~~~~l~-~l~~---~~~~~~~~~~~~l~-~~~~v~~~~~~g~~~digt~~~ 166 (302)
+.++++....+. ...... +.++|+.+.+. .+.. ....+ .+....+. ...++..+..++.|+||+||++
T Consensus 146 ~~~~~i~~~~~~-----~~i~~~~~p~~f~~~~l~~~~~~~~~~g~~~-td~~~~~~~~~~~v~~v~~~~~~~dIdtpeD 219 (236)
T 1i52_A 146 PGKNAIAHTVDR-----NGLWHALTPQFFPRELLHDCLTRALNEGATI-TDEASALEYCGFHPQLVEGRADNIKVTRPED 219 (236)
T ss_dssp TTSSSEEEEECC-----TTCEEEEEEEEEEHHHHHHHHHHHHHTTCCC-CSHHHHHHHTTCCCEEEECCTTCCCCCSHHH
T ss_pred CCCCceeeccCh-----HhheeeeCCceecHHHHHHHHHHHHhcCCCc-ccHHHHHHHcCCCEEEEecCccccccCCHHH
Confidence 311455433211 122222 56677776553 2221 11111 11111111 1356777777788999999999
Q ss_pred HHHHHHHH
Q 022113 167 YITGLRLY 174 (302)
Q Consensus 167 ~~~a~~~~ 174 (302)
|..+...+
T Consensus 220 l~~a~~~~ 227 (236)
T 1i52_A 220 LALAEFYL 227 (236)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98887654
No 163
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=96.24 E-value=0.0051 Score=49.49 Aligned_cols=117 Identities=16% Similarity=0.151 Sum_probs=63.6
Q ss_pred EEecC-CCCCChHHHHHcHhhhccCCCCcEEEEeCCe-ecCc-CHHHHHHHHHHcCCcEEEEEEeCCCCCCcceEEEeCC
Q 022113 18 CSQET-EPLGTAGPLALARDKLIDDTGEPFFVLNSDV-ISEY-PFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVMEES 94 (302)
Q Consensus 18 ~~~~~-~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~-l~~~-~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~v~~d~~ 94 (302)
++.++ ...|++++++.++..+.. .+.++++.||. +.+. .+.++++.+ +.+.++++...
T Consensus 63 ~v~~~~~~~G~~~si~~al~~~~~--~~~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~~~~~~~---------------- 123 (197)
T 3d5n_A 63 VIYNPFWNEGISTSLKLGLRFFKD--YDAVLVALGDMPFVTKEDVNKIINTF-KPNCKAVIPTH---------------- 123 (197)
T ss_dssp EEECTTGGGCHHHHHHHHHHHTTT--SSEEEEEETTCCCSCHHHHHHHHHTC-CTTCSEEEEEE----------------
T ss_pred EEECCCCCCCHHHHHHHHHHhhcc--CCcEEEEeCCccccCHHHHHHHHHHh-cCCCcEEEEEe----------------
Confidence 44443 357999999999998853 26799999999 5554 477888776 44444332221
Q ss_pred CCcEEEEEecCCCCCCCeEEEEEEEeCHhhHhhccCCCCCccccchHHHHhc--CcEEEEEec--CeeEecCChHHHHHH
Q 022113 95 TGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALE--GKLFAMVLP--GFWMDIGQPRDYITG 170 (302)
Q Consensus 95 ~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~~~~~~~~~l~~~--~~v~~~~~~--g~~~digt~~~~~~a 170 (302)
+++ ...| .+|+++++..+..... ... ...++++ .++..+..+ +.|+||+||++|..+
T Consensus 124 ~g~----~~~P------------~~~~~~~l~~l~~l~g--~~~-~~~~l~~~~~~v~~v~~~~~~~~~dIdTpeDl~~~ 184 (197)
T 3d5n_A 124 KGE----RGNP------------VLISKSLFNEIEKLRG--DVG-ARVILNKIKIEELCFIECSEGVLIDIDKKEDLMRL 184 (197)
T ss_dssp TTE----ECSC------------EEEEHHHHHHHHHCCT--TCC-THHHHTTSCGGGEEEEECCGGGTCCTTTC------
T ss_pred CCc----ccCC------------EEECHHHHHHHHccCC--Ccc-HHHHHHhCccCeEEEEcCCCCcccCCCCHHHHHHH
Confidence 111 0112 2788888876642111 011 2233333 345555543 578999999999776
Q ss_pred HH
Q 022113 171 LR 172 (302)
Q Consensus 171 ~~ 172 (302)
..
T Consensus 185 ~~ 186 (197)
T 3d5n_A 185 RD 186 (197)
T ss_dssp --
T ss_pred HH
Confidence 54
No 164
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=95.26 E-value=0.032 Score=44.89 Aligned_cols=38 Identities=13% Similarity=0.007 Sum_probs=30.6
Q ss_pred CCChHHHHHcHhhhccCCCCcEEEEeCCe-ecCcC-HHHHHHH
Q 022113 25 LGTAGPLALARDKLIDDTGEPFFVLNSDV-ISEYP-FAEMIEF 65 (302)
Q Consensus 25 ~Gt~~al~~a~~~i~~~~~~~~lv~~gD~-l~~~~-l~~~~~~ 65 (302)
.|++++|+.++..+.. +.++++.||+ +.+.+ +.++++.
T Consensus 77 ~G~~~si~~~l~~~~~---~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 77 PGPLAGMLSVMQQEAG---EWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp CSHHHHHHHHHHHCCS---SEEEEEETTCTTCCTTHHHHHHHT
T ss_pred CCHHHHHHHHHHhCCC---CcEEEEeCCcCcCCHHHHHHHHhh
Confidence 6999999999998853 6899999999 55554 7777765
No 165
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=94.95 E-value=0.086 Score=43.47 Aligned_cols=136 Identities=13% Similarity=0.092 Sum_probs=81.0
Q ss_pred hHHHHHcHhhhccC-CCCcEEEEeCCe-ecC-cCHHHHHHHHHHcCCcEEEEEEeCCCCCCcceEEEeCCCCcEEEEEec
Q 022113 28 AGPLALARDKLIDD-TGEPFFVLNSDV-ISE-YPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVMEESTGKVEKFVEK 104 (302)
Q Consensus 28 ~~al~~a~~~i~~~-~~~~~lv~~gD~-l~~-~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~v~~d~~~~~v~~~~ek 104 (302)
.+++++++..+... ..+.++++.||. +.+ ..+.++++.+.+ +.+..+...+..++-+| .++ +|.+....+.
T Consensus 84 ~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~-~~~~~i~~~p~~dt~~~----~~~-~g~v~~~~~r 157 (231)
T 3q80_A 84 TDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD-GYAAVVPVLPLSDTIKA----VDA-NGVVLGTPER 157 (231)
T ss_dssp HHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT-TCSEEEEEECCSSCEEE----ECT-TSBEEECCCG
T ss_pred HHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh-cCCeEEEEEeccCCEEE----EcC-CCcEEEecch
Confidence 58899999888531 125678889998 554 448889888865 24566777777776443 343 6777655432
Q ss_pred CCCCCCCeEEEEEEEeCHhhHh-hccC--C---CCCccccchHHHH-hcCcEEEEEecCeeEecCChHHHHHHHHHH
Q 022113 105 PKLFVGNKINAGIYLLNPAVLD-RIEL--R---PTSIEKEVFPKIA-LEGKLFAMVLPGFWMDIGQPRDYITGLRLY 174 (302)
Q Consensus 105 p~~~~~~~~~~Giy~~~~~~l~-~l~~--~---~~~~~~~~~~~l~-~~~~v~~~~~~g~~~digt~~~~~~a~~~~ 174 (302)
. .-..+.| -++|+.+.|. .++. . ...+ .+-...+. ...++....-+..++.|++|+++..++..+
T Consensus 158 ~---~l~~~qT-Pq~F~~~~L~~a~~~~~~~n~~~~~-TD~~~~~~~~g~~v~~v~g~~~n~kIt~p~Dl~~ae~~l 229 (231)
T 3q80_A 158 A---GLRAVQT-PQGFTTDLLLRSYQRGSLDLPAAEY-TDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229 (231)
T ss_dssp G---GEEEECS-CEEEEHHHHHHHHHHHTC-----CC-SSSHHHHHHTTCCCEEEECCGGGCCCCSHHHHHHHHHHH
T ss_pred h---heEEEcC-CcEEEHHHHHHHHHHHHhhcCCCCC-CcHHHHHHHcCCcEEEEECCccccCcCCHHHHHHHHHHh
Confidence 1 1122333 5788877663 3221 1 1112 12222222 235666555555689999999998887644
No 166
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=94.42 E-value=0.33 Score=39.18 Aligned_cols=126 Identities=11% Similarity=0.103 Sum_probs=73.9
Q ss_pred HHhhcCCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCe-ecCcC-HHHHHHHHHHcCCcEEEEEEeCCCCC
Q 022113 7 EFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDV-ISEYP-FAEMIEFHKAHGGEASIMVTKVDEPS 84 (302)
Q Consensus 7 ~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~-l~~~~-l~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (302)
.+.+.+|+++.. ......|...+|+.++..+ . +.+ ++.||+ +.+.+ +.++++.+.+.+.++++.. +
T Consensus 53 ~~~~~~~~~~v~-d~~~~~G~~~si~~gl~~~-~---~~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~~~---~--- 120 (208)
T 3ngw_A 53 KLSSRYEAEFIW-DLHKGVGSIAGIHAALRHF-G---SCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDALIPK---H--- 120 (208)
T ss_dssp HHHTTSCSCEEC-CTTCCCSHHHHHHHHHHHH-S---SEE-EEETTCTTCCHHHHHHHHHHHHHHTCSEEEEE---S---
T ss_pred HHHHhcCCeEEe-cCCCCCChHHHHHHHHHHc-C---CCE-EEECCccCCCHHHHHHHHHHhhcCCCCEEEEc---C---
Confidence 334446665432 1222346669999999988 4 677 999999 55555 8888888766555543322 1
Q ss_pred CcceEEEeCCCCcEEEEEecCCCCCCCeEEEEEEEeCHhhHhhcc----CCCCCccccchHHHHhcCcEEEEEec-----
Q 022113 85 KYGVVVMEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIE----LRPTSIEKEVFPKIALEGKLFAMVLP----- 155 (302)
Q Consensus 85 ~~g~v~~d~~~~~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~----~~~~~~~~~~~~~l~~~~~v~~~~~~----- 155 (302)
|+ ..|- ..+++++++..+. .+... +..++++.++.....+
T Consensus 121 -----------g~-----~~Pl----------~al~~~~~~~~l~~~l~~G~~~-----~~~~l~~~~~~~v~~~~~~~~ 169 (208)
T 3ngw_A 121 -----------DY-----PEPL----------LAYYAESAADELERAILQGIRK-----ILVPLERLNVVYYPVEKLRKF 169 (208)
T ss_dssp -----------SS-----BCTT----------EEEECGGGHHHHHHHHHTTCCC-----THHHHHTSCEEEEEGGGGTTT
T ss_pred -----------CC-----eeEE----------EEEEcHHHHHHHHHHHHcCCCC-----HHHHHHhCCEEEecHHHhccc
Confidence 11 0110 3346666665443 22222 3445555555545543
Q ss_pred ----CeeEecCChHHHHHHHHHHH
Q 022113 156 ----GFWMDIGQPRDYITGLRLYL 175 (302)
Q Consensus 156 ----g~~~digt~~~~~~a~~~~l 175 (302)
+.++|++||++|..+.+.+.
T Consensus 170 d~~~~~~~ninTpeDl~~~~~~~~ 193 (208)
T 3ngw_A 170 DKELISFFNINTPDDLKRAEEICS 193 (208)
T ss_dssp CTTCGGGCCCCSHHHHHHHHHHHH
T ss_pred CcccceEEecCCHHHHHHHHHHhc
Confidence 35899999999988776553
No 167
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=90.82 E-value=0.19 Score=44.50 Aligned_cols=125 Identities=14% Similarity=0.080 Sum_probs=69.1
Q ss_pred CCChHHHHHcHhhhccCCCCcEEEEeCCe-ecC-cCHHHHHHHHHHcCCcEEEEEEeCCCCCCcceEEEeCCCCcEEEEE
Q 022113 25 LGTAGPLALARDKLIDDTGEPFFVLNSDV-ISE-YPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVMEESTGKVEKFV 102 (302)
Q Consensus 25 ~Gt~~al~~a~~~i~~~~~~~~lv~~gD~-l~~-~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~v~~d~~~~~v~~~~ 102 (302)
.|..++++.++..+.. +.++++.||. +.+ ..+.++++.+.+. +..+.+.+..++.++.....+ ...+.. .
T Consensus 74 ~g~~~sv~~aL~~l~~---d~vlv~~~D~Pli~~~~i~~li~~~~~~--~a~i~~~~~~d~vk~v~~t~~--r~~l~~-~ 145 (371)
T 1w55_A 74 DTRAESLKKALELIDS---EFVMVSDVARVLVSKNLFDRLIENLDKA--DCITPALKVADTTLFDNEALQ--REKIKL-I 145 (371)
T ss_dssp SSHHHHHHHHHTTCCS---SEEEEEETTCTTCCHHHHHHHHTTGGGC--SEEEEEECCCSCEEETTEEEC--GGGCCE-E
T ss_pred CChHHHHHHHHHhcCC---CeEEEEeCCcccCCHHHHHHHHHHHHhc--CCEEEEEEeecCeeeeeeecC--ccceee-c
Confidence 4566899999988753 6889999998 444 4588888877654 344545554443111100011 001100 0
Q ss_pred ecCCCCCCCeEEEEEEEeCHhhHhhc-cCCCCCccccchHHHHh-cCcEEEEEecCeeEecCChHHHHHHH
Q 022113 103 EKPKLFVGNKINAGIYLLNPAVLDRI-ELRPTSIEKEVFPKIAL-EGKLFAMVLPGFWMDIGQPRDYITGL 171 (302)
Q Consensus 103 ekp~~~~~~~~~~Giy~~~~~~l~~l-~~~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~digt~~~~~~a~ 171 (302)
. .-++|+.+.+..+ ..... + .+....+.. ..++..+..++.|+||+||++|..++
T Consensus 146 ~------------~P~~f~~~~l~~~~~~~~~-~-td~~~ll~~~g~~V~~v~~~~~~~dIdTpeDL~~Ae 202 (371)
T 1w55_A 146 Q------------TPQISKTKLLKKALDQNLE-F-TDDSTAIAAMGGKIWFVEGEENARKLTFKEDLKKLD 202 (371)
T ss_dssp C------------SCEEEEHHHHHHHTSSCCC-C-SSHHHHHHTTTCCEEEEECCGGGCCCCSGGGGGGSC
T ss_pred C------------CcceecHHHHHHHHHhccc-c-cCHHHHHHhCCCcEEEEECCccccCCCCHHHHHHHH
Confidence 1 1246777766433 22110 1 111111111 34677666677899999999997764
No 168
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=84.24 E-value=4.8 Score=36.39 Aligned_cols=69 Identities=9% Similarity=0.021 Sum_probs=51.7
Q ss_pred hHHHHHhhcCCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCeecCcC-HHHHHHHHHHcCCcEE
Q 022113 3 NFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYP-FAEMIEFHKAHGGEAS 74 (302)
Q Consensus 3 ~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~~~~-l~~~~~~~~~~~~~~~ 74 (302)
+.+.++.++.+.++.++..++..|-+.|...++..... +.++++..|...+.+ +.++++.+.+....++
T Consensus 78 ~~l~~~~~~~~~~v~vi~~~~n~G~~~a~N~g~~~A~g---d~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v 147 (472)
T 1xhb_A 78 RPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSRG---QVITFLDAHCECTAGWLEPLLARIKHDRRTVV 147 (472)
T ss_dssp HHHHHHHHSSSSCEEEEECSSCCCHHHHHHHHHHHCCS---SEEEEEESSEEECTTCHHHHHHHHHHCTTEEE
T ss_pred HHHHHHHHHCCCcEEEEECCCCCChHHHHHHHHHhccC---CeEEEECCCeEeCccHHHHHHHHHHhCCCEEE
Confidence 34556555555578888888778999999888887643 667778999987766 8899998877654443
No 169
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=75.24 E-value=10 Score=30.52 Aligned_cols=54 Identities=17% Similarity=0.043 Sum_probs=41.9
Q ss_pred CcEEEEEecC--------CCCCChHHHHHcHhhhccCCCCcEEEEeCCeecCcC-HHHHHHHHHHc
Q 022113 13 GIKIICSQET--------EPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYP-FAEMIEFHKAH 69 (302)
Q Consensus 13 g~~i~~~~~~--------~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~~~~-l~~~~~~~~~~ 69 (302)
..++.++..+ +..|.+.+...+...... +.++++.+|.++..+ +..+++.+.+.
T Consensus 54 ~~~i~~i~~~~~~~~~~~~n~G~~~a~N~gi~~a~g---~~i~~lD~Dd~~~~~~l~~~~~~~~~~ 116 (255)
T 1qg8_A 54 DNRVRFYQSDISGVKERTEKTRYAALINQAIEMAEG---EYITYATDDNIYMPDRLLKMVRELDTH 116 (255)
T ss_dssp STTEEEEECCCCSHHHHHSSCHHHHHHHHHHHHCCC---SEEEEEETTEEECTTHHHHHHHHHHHC
T ss_pred cCCEEEEecccccccccccccCHHHHHHHHHHHcCC---CEEEEeCCCCccChHHHHHHHHHHHhC
Confidence 4567888877 667888888888887643 677788999988777 88888888765
No 170
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=72.93 E-value=9.5 Score=30.41 Aligned_cols=66 Identities=14% Similarity=0.100 Sum_probs=45.1
Q ss_pred HHHHHhhcCCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCeecCcC-HHHHHHHHHHcCCcEE
Q 022113 4 FLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYP-FAEMIEFHKAHGGEAS 74 (302)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~~~~-l~~~~~~~~~~~~~~~ 74 (302)
.++++.++. .++.++.+ +..|.+.|.-.++..... +.++++.+|.+.+.+ +.++++.+.+.+.++.
T Consensus 51 ~~~~~~~~~-~~i~~i~~-~n~G~~~a~N~g~~~a~g---~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v 117 (240)
T 3bcv_A 51 ICDDYAAQY-PNIKVIHK-KNAGLGMACNSGLDVATG---EYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAV 117 (240)
T ss_dssp HHHHHHHHC-SSEEEEEC-CCCCHHHHHHHHHHHCCS---SEEEECCTTCCCCTTHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHhhC-CCEEEEEC-CCCChHHHHHHHHHHcCC---CEEEEECCCCcCCHHHHHHHHHHHHhcCCCEE
Confidence 344444433 24666665 467888888888887643 666778999988777 8888888877555554
No 171
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=70.73 E-value=12 Score=34.77 Aligned_cols=65 Identities=9% Similarity=0.078 Sum_probs=47.9
Q ss_pred hHHHHHhhcCCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCeecCcC-HHHHHHHHHHcCC
Q 022113 3 NFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYP-FAEMIEFHKAHGG 71 (302)
Q Consensus 3 ~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~~~~-l~~~~~~~~~~~~ 71 (302)
+.+.++.++. ..|.++..++..|-+.|...++..... +.++++..|...+.+ |..+++.+.+...
T Consensus 161 ~~l~~~~~~~-~~v~vi~~~~n~G~~~A~N~G~~~A~g---d~i~fLD~D~~~~p~~L~~ll~~l~~~~~ 226 (570)
T 2d7i_A 161 KPLEDYMALF-PSVRILRTKKREGLIRTRMLGASVATG---DVITFLDSHCEANVNWLPPLLDRIARNRK 226 (570)
T ss_dssp HHHHHHHTTS-TTEEEEECSSCCCHHHHHHHHHHHCCS---SEEEECCSSEEECTTCSHHHHHHHHHCTT
T ss_pred HHHHHHHHhC-CeEEEEECCCCCCHHHHHHHHHHhcCC---CEEEEEcCCccccccHHHHHHHHHHhCCC
Confidence 4555554444 368888887778999999988887643 566778999977666 8889998877543
No 172
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=62.78 E-value=33 Score=27.98 Aligned_cols=51 Identities=14% Similarity=0.129 Sum_probs=34.7
Q ss_pred EEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCe--ecCcCHHHHHHHHH
Q 022113 16 IICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDV--ISEYPFAEMIEFHK 67 (302)
Q Consensus 16 i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~--l~~~~l~~~~~~~~ 67 (302)
+.+..|. ..|.+.++.++...+.....+.++++.+|+ +...++.++++.+.
T Consensus 77 ~~~~~q~-~~gLg~rl~~a~~~~~~~~~~~vliigaD~P~L~~~~l~~a~~~l~ 129 (242)
T 3cgx_A 77 HMFAAQQ-GLDLGERMKHAMQKAFDDGYDRVVLMGSDIPDYPCELVQKALNDLQ 129 (242)
T ss_dssp SEEEECC-SSSHHHHHHHHHHHHHHTTCSEEEEECSSCTTCCHHHHHHHHHHTT
T ss_pred cEEecCC-CCCHHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCHHHHHHHHHHhc
Confidence 4555563 358888999988765221126899999999 55666887776543
No 173
>1o6d_A Hypothetical UPF0247 protein TM0844; structural genomics, unknown function; 1.66A {Thermotoga maritima} SCOP: c.116.1.3
Probab=46.98 E-value=41 Score=25.65 Aligned_cols=73 Identities=11% Similarity=0.247 Sum_probs=44.4
Q ss_pred hhHHHHHhhcCCcEEEEEecCCCCCChHHHHHc-----HhhhccCCCCcEEE---EeCCeecCcCHHHHHHHHHHcCCcE
Q 022113 2 LNFLKEFEAKLGIKIICSQETEPLGTAGPLALA-----RDKLIDDTGEPFFV---LNSDVISEYPFAEMIEFHKAHGGEA 73 (302)
Q Consensus 2 ~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a-----~~~i~~~~~~~~lv---~~gD~l~~~~l~~~~~~~~~~~~~~ 73 (302)
.+|.+.+....++++.-+.+... .+...+... +..+.+ +.++| ..|..+.+..|.+.++.+..++.++
T Consensus 22 ~eY~kRl~~~~~lei~ev~~~k~-~~~~~~~~~E~~~il~~i~~---~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G~~i 97 (163)
T 1o6d_A 22 KHYEKFLRRFCKPEVLEIKRVHR-GSIEEIVRKETEDLTNRILP---GSFVMVMDKRGEEVSSEEFADFLKDLEMKGKDI 97 (163)
T ss_dssp HHHHHHHTTTCEEEEEEECCCCC-SCHHHHHHHHHHHHHTTCCT---TCEEEEEEEEEEECCHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHcCccCCceEEEecCccc-ccHHHHHHHHHHHHHHhcCC---CCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCeE
Confidence 46777766656777665655333 333332221 223322 34333 4888899999999999987777666
Q ss_pred EEEEE
Q 022113 74 SIMVT 78 (302)
Q Consensus 74 ~l~~~ 78 (302)
+++.-
T Consensus 98 ~FvIG 102 (163)
T 1o6d_A 98 TILIG 102 (163)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 65554
No 174
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=44.52 E-value=51 Score=29.78 Aligned_cols=56 Identities=11% Similarity=0.049 Sum_probs=41.9
Q ss_pred EEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCeecCcC-HHHHHHHHHHcCCcE
Q 022113 15 KIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYP-FAEMIEFHKAHGGEA 73 (302)
Q Consensus 15 ~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~~~~-l~~~~~~~~~~~~~~ 73 (302)
.+.++..++..|-+.|...++..... +.++++.+|...+.+ +..+++.+.+....+
T Consensus 122 ~v~vi~~~~n~G~~~A~N~G~~~A~g---d~i~flD~D~~~~p~~L~~ll~~~~~~~~~v 178 (501)
T 2ffu_A 122 KVRVLRNDRREGLMRSRVRGADAAQA---KVLTFLDSHCECNEHWLEPLLERVAEDRTRV 178 (501)
T ss_dssp TEEEEECSSCCHHHHHHHHHHHHCCS---SEEEECCSSEEECTTCHHHHHHHHHHCTTEE
T ss_pred CEEEEECCCCcCHHHHHHHHHHhcCC---CEEEEECCCcccCccHHHHHHHHHHhCCCeE
Confidence 46777766677888888888887643 566778999977666 899999887765543
No 175
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=41.21 E-value=1.1e+02 Score=24.49 Aligned_cols=52 Identities=10% Similarity=0.063 Sum_probs=36.6
Q ss_pred cEEEEEecCC-C-CCChHHHHHcHhhhccCCCCcEEEEeCCeecCcC-HHHHHHHHHH
Q 022113 14 IKIICSQETE-P-LGTAGPLALARDKLIDDTGEPFFVLNSDVISEYP-FAEMIEFHKA 68 (302)
Q Consensus 14 ~~i~~~~~~~-~-~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~~~~-l~~~~~~~~~ 68 (302)
.+|-.+.... . .|.+.|.-++..... ++.++++++|++.+.+ +.++++...+
T Consensus 47 ~EiIVVDn~s~d~~g~a~a~N~Gi~~A~---g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 47 AEFLAADNREGNQFHGFSWHKQMLPRCK---GRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp EEEEEEECTTSCSCCTTTHHHHHGGGCC---SSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred EEEEEEECCCCCcccHHHHHHHHHHhcC---CCEEEEECCCcccCccHHHHHHHHHHh
Confidence 5666666643 2 566777777776654 3677889999988777 7888877655
No 176
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=38.53 E-value=20 Score=28.29 Aligned_cols=41 Identities=12% Similarity=0.166 Sum_probs=29.5
Q ss_pred EEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCe-ec-CcCHHHHHH
Q 022113 18 CSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDV-IS-EYPFAEMIE 64 (302)
Q Consensus 18 ~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~-l~-~~~l~~~~~ 64 (302)
++.|+ .|.+.+++.+...+ . +.++++.+|+ +. ...+.++++
T Consensus 69 ~v~~~--~gl~~sl~~a~~~~-~---~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 69 VLLDE--KDLNEALNRYLKEA-E---EPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp EEECC--SCHHHHHHHHHHHC-C---SCEEEECSCCTTCCHHHHHHHTT
T ss_pred EEECC--CCHHHHHHHHHHhc-C---CCEEEEcCCcCCCCHHHHHHHHc
Confidence 34444 68899999998776 2 6899999999 44 444666655
No 177
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=33.66 E-value=38 Score=32.14 Aligned_cols=62 Identities=11% Similarity=0.253 Sum_probs=43.3
Q ss_pred CcEEEEEecCCCCCChHHHHHcHhhhccC-CCCcEEEEeCCeecCcC-HHHHHHHHHHcCCcEEE
Q 022113 13 GIKIICSQETEPLGTAGPLALARDKLIDD-TGEPFFVLNSDVISEYP-FAEMIEFHKAHGGEASI 75 (302)
Q Consensus 13 g~~i~~~~~~~~~Gt~~al~~a~~~i~~~-~~~~~lv~~gD~l~~~~-l~~~~~~~~~~~~~~~l 75 (302)
+.+|.++.++ -+|-++|.-.++...... ..+.++++..|.+...+ +.++++.+........+
T Consensus 239 ~~~I~vI~~~-N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~v 302 (657)
T 4fix_A 239 GSRLSIHDQP-NLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLV 302 (657)
T ss_dssp GGGEEEEECC-CCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEE
T ss_pred CCCEEEEECC-CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEE
Confidence 4478888887 678888877777665321 12567888999987766 88888888776544333
No 178
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=30.70 E-value=75 Score=24.28 Aligned_cols=73 Identities=14% Similarity=0.211 Sum_probs=40.3
Q ss_pred hhHHHHHhhcCCcEEEEEecC-CCCC----ChHHHHH-----cHhhhccCCCCcEEE---EeCCeecCcCHHHHHHHHHH
Q 022113 2 LNFLKEFEAKLGIKIICSQET-EPLG----TAGPLAL-----ARDKLIDDTGEPFFV---LNSDVISEYPFAEMIEFHKA 68 (302)
Q Consensus 2 ~~~~~~~~~~~g~~i~~~~~~-~~~G----t~~al~~-----a~~~i~~~~~~~~lv---~~gD~l~~~~l~~~~~~~~~ 68 (302)
.+|.+.+....++++..+.+. .+.+ +...+.. .+..+.. +.++| ..|..+.+..|.+.++.+..
T Consensus 21 ~eY~kRl~~~~~lei~ev~~~k~~~~~~~~~~~~~~~~E~~~il~~i~~---~~~vI~LD~~Gk~~sS~~fA~~l~~~~~ 97 (167)
T 1to0_A 21 EEYTKRLSAYAKIDIIELPDEKAPENLSDQDMKIIKDKEGDRILSKISP---DAHVIALAIEGKMKTSEELADTIDKLAT 97 (167)
T ss_dssp HHHHHHHTTTSEEEEEEECCCCC---------CHHHHHHHHHHHTTSCT---TSEEEEEEEEEEECCHHHHHHHHHHHHT
T ss_pred HHHHHHcCccCCceEEEecCccCccccccccHHHHHHHHHHHHHhhcCC---CCEEEEEcCCCCcCCHHHHHHHHHHHHh
Confidence 467777666567776655552 2222 1111211 1222322 34333 48888999999999998877
Q ss_pred cC-CcEEEEE
Q 022113 69 HG-GEASIMV 77 (302)
Q Consensus 69 ~~-~~~~l~~ 77 (302)
++ .+++++.
T Consensus 98 ~G~~~i~FvI 107 (167)
T 1to0_A 98 YGKSKVTFVI 107 (167)
T ss_dssp TTCCEEEEEE
T ss_pred cCCceEEEEE
Confidence 65 4555444
No 179
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=30.69 E-value=1e+02 Score=23.48 Aligned_cols=74 Identities=12% Similarity=0.212 Sum_probs=42.0
Q ss_pred hhHHHHHhhcCCcEEEEEecCC-CCCChH----HHH-----HcHhhhccCCCCcEEE---EeCCeecCcCHHHHHHHHHH
Q 022113 2 LNFLKEFEAKLGIKIICSQETE-PLGTAG----PLA-----LARDKLIDDTGEPFFV---LNSDVISEYPFAEMIEFHKA 68 (302)
Q Consensus 2 ~~~~~~~~~~~g~~i~~~~~~~-~~Gt~~----al~-----~a~~~i~~~~~~~~lv---~~gD~l~~~~l~~~~~~~~~ 68 (302)
.+|.+.+.....+++..+.+.. +.+... .++ +.+..+.. ++++| ..|..+.+..|.+.++.+..
T Consensus 25 ~eY~kRl~~~~~~ei~ei~~~k~~~~~s~~~~~~~~~~Eg~~il~~i~~---~~~vI~LD~~Gk~~sS~~fA~~l~~~~~ 101 (163)
T 4fak_A 25 AEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKP---QSTVITLEIQGKMLSSEGLAQELNQRMT 101 (163)
T ss_dssp HHHHHHHTTTCEEEEEEECCCCCCTTCCHHHHHHHHHHHHHHHHHTCCT---TSEEEEEEEEEEECCHHHHHHHHHHHHH
T ss_pred HHHHHHccCcCCeEEEEecccccccccchhhHHHHHHHHHHHHHHhCCC---CCEEEEEcCCCCcCCHHHHHHHHHHHHh
Confidence 4666666555566666665533 222111 111 11223322 34443 48888999999999999887
Q ss_pred cC-CcEEEEEE
Q 022113 69 HG-GEASIMVT 78 (302)
Q Consensus 69 ~~-~~~~l~~~ 78 (302)
++ .+++++.-
T Consensus 102 ~g~~~i~FvIG 112 (163)
T 4fak_A 102 QGQSDFVFVIG 112 (163)
T ss_dssp TTCCEEEEEEC
T ss_pred cCCcceEEEEE
Confidence 76 46665554
No 180
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=30.55 E-value=1.4e+02 Score=27.73 Aligned_cols=56 Identities=11% Similarity=0.056 Sum_probs=38.7
Q ss_pred EEEEEecCC-CCCChHHHHHcHhhhccCCCCcEEEEeCCeecCcC-HHHHHHHHHHcCCcE
Q 022113 15 KIICSQETE-PLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYP-FAEMIEFHKAHGGEA 73 (302)
Q Consensus 15 ~i~~~~~~~-~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~~~~-l~~~~~~~~~~~~~~ 73 (302)
.+.++..+. ..|-++++..++..... +-++++.+|.+.+.+ +.++++.+.+.....
T Consensus 149 ~i~~i~~~~~~~g~~~a~N~g~~~a~g---~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~ 206 (625)
T 2z86_A 149 NIKYVRQKDYGYQLCAVRNLGLRAAKY---NYVAILDCDMAPNPLWVQSYMELLAVDDNVA 206 (625)
T ss_dssp CEEEEEECCCSCCHHHHHHHHHHHCCS---SEEEEECTTEEECTTHHHHHHHHHHHCTTEE
T ss_pred CeEEEEeCCCCcchhHHHHHHHHhCCc---CEEEEECCCCCCCHHHHHHHHHHHhcCCceE
Confidence 456665543 34567888888777643 667778999988777 788888887655443
No 181
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=27.23 E-value=1.2e+02 Score=28.03 Aligned_cols=52 Identities=12% Similarity=-0.055 Sum_probs=37.5
Q ss_pred EEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCeecCcC-HHHHHHHHHHcC
Q 022113 15 KIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYP-FAEMIEFHKAHG 70 (302)
Q Consensus 15 ~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~~~~-l~~~~~~~~~~~ 70 (302)
.+.++.+ +..|-+.+...+...... +.++++.+|.++..+ +.++++.+.+..
T Consensus 431 ~i~~~~~-~n~G~~~a~n~g~~~a~g---~~i~~ld~D~~~~~~~l~~~~~~~~~~~ 483 (625)
T 2z86_A 431 RVRFISQ-KNKGIGSASNTAVRLCRG---FYIGQLDSDDFLEPDAVELCLDEFRKDL 483 (625)
T ss_dssp TEEEEEE-CCCCHHHHHHHHHHHCCS---SEEEECCTTCEECTTHHHHHHHHHHHCT
T ss_pred cEEEEeC-CCCCHHHHHHHHHHhcCC---CEEEEECCCcccChhHHHHHHHHHHhCC
Confidence 4555654 446888888888887643 666778999987777 788888776543
No 182
>1ns5_A Hypothetical protein YBEA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.68A {Escherichia coli} SCOP: c.116.1.3
Probab=25.53 E-value=1e+02 Score=23.18 Aligned_cols=74 Identities=11% Similarity=0.130 Sum_probs=41.7
Q ss_pred hhHHHHHhhcCCcEEEEEecC-CCCC-ChHHHHH-----cHhhhccCCCCcEEE--EeCCeecCcCHHHHHHHHHHcCCc
Q 022113 2 LNFLKEFEAKLGIKIICSQET-EPLG-TAGPLAL-----ARDKLIDDTGEPFFV--LNSDVISEYPFAEMIEFHKAHGGE 72 (302)
Q Consensus 2 ~~~~~~~~~~~g~~i~~~~~~-~~~G-t~~al~~-----a~~~i~~~~~~~~lv--~~gD~l~~~~l~~~~~~~~~~~~~ 72 (302)
.+|.+.+....++++..+.+. .+.+ +...+.. .+..+.. +.+++ ..|..+.+..|.+.++.+..++.+
T Consensus 21 ~eY~kRl~~~~~~e~~ev~~~~~~~~~~~~~~~~~E~~~il~~i~~---~~vi~Ld~~Gk~~sS~~fA~~l~~~~~~g~~ 97 (155)
T 1ns5_A 21 TEYLRRFPKDMPFELIEIPAGKRGKNADIKRILDKEGEQMLAAAGK---NRIVTLDIPGKPWDTPQLAAELERWKLDGRD 97 (155)
T ss_dssp HHHHTTSCTTSCEEEEEECCCCCCTTCCHHHHHHHHHHHHHHHHTT---SEEEEEEEEEECCCHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHcCccCCceEEEecCCcCcccccHHHHHHHHHHHHHHhcCC---CcEEEEcCCCCcCCHHHHHHHHHHHHhcCCe
Confidence 355555555456776655553 2222 2222211 1233432 33333 488889999999999998777666
Q ss_pred EEEEEE
Q 022113 73 ASIMVT 78 (302)
Q Consensus 73 ~~l~~~ 78 (302)
++++.-
T Consensus 98 i~FvIG 103 (155)
T 1ns5_A 98 VSLLIG 103 (155)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 665553
No 183
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=24.58 E-value=16 Score=35.15 Aligned_cols=61 Identities=16% Similarity=0.097 Sum_probs=0.0
Q ss_pred HHHHHhhcCCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCeecCcC-HHHHHHHHH
Q 022113 4 FLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYP-FAEMIEFHK 67 (302)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~~~~-l~~~~~~~~ 67 (302)
.+.++.++.+..|.++..++-.|.+.|.-.+...... +-++.+.+|.++..+ +..+++.+.
T Consensus 48 il~~~~~~~~~~i~~i~~~~n~G~~~arN~gi~~A~g---dyI~flD~Dd~~~p~~l~~l~~~l~ 109 (729)
T 3l7i_A 48 LMDEAIKDYDKNIRFIDLDENSGHAHARNIALEEVET---PYFMFLDADDELASYAITFYLEKFN 109 (729)
T ss_dssp -----------------------------------------------------------------
T ss_pred HHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHhccC---CEEEEECCCCCCChhHHHHHHHHhc
Confidence 3444444445678888877778989988888887643 666778999977665 777777765
No 184
>2ohw_A YUEI protein; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; 1.40A {Bacillus subtilis} SCOP: d.79.8.1
Probab=22.74 E-value=94 Score=22.74 Aligned_cols=84 Identities=11% Similarity=0.146 Sum_probs=48.6
Q ss_pred hhHHHHHhhcCCcEEEEEecCCCCCChHHHHHcHhhhccCCCCcEEEEeCCeecCcCHHHHHHHHHHcCCcEEEEEEeCC
Q 022113 2 LNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVD 81 (302)
Q Consensus 2 ~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l~~~~l~~~~~~~~~~~~~~~l~~~~~~ 81 (302)
++||+.|.||-=+.+++-.-.+ .+.-..+..++..- ....|+++|++=.+ .+...++...+.+-..|++-- ..
T Consensus 27 r~yLGtfrERV~lalt~~q~~~-~~~~~~~~~~l~~~----~~~~l~ing~l~~~-~~~~YiklA~~~~i~fTiV~~-~~ 99 (133)
T 2ohw_A 27 HLFLGSLRERVVLALTKGQVLR-SKPYKEAEHELKNS----HNVTLLINGELQYQ-SYSSYIQMASRYGVPFKIVSD-LQ 99 (133)
T ss_dssp HHTTTCCGGGEEEEEEHHHHTS-SSCCHHHHHHHHTC----SSEEEEEETTSCHH-HHHHHHHHHHHTTCCEEEECC-CS
T ss_pred HHhccchhhhhheeeeHHHHhc-hhHHHHHHHHHhhC----CCcEEEEcCCCCHH-HHHHHHHHHHHcCCCeEEecC-CC
Confidence 4678888887655555333233 34445565544433 25778899985222 244555555666666665433 23
Q ss_pred CCCCcceEEEe
Q 022113 82 EPSKYGVVVME 92 (302)
Q Consensus 82 ~~~~~g~v~~d 92 (302)
.+..+|+|...
T Consensus 100 ~~~~~glVv~s 110 (133)
T 2ohw_A 100 FHTPLGIVIAA 110 (133)
T ss_dssp SCCSEEEEEEE
T ss_pred CCCCeEEEEEc
Confidence 45668887765
No 185
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=22.19 E-value=33 Score=31.53 Aligned_cols=102 Identities=22% Similarity=0.226 Sum_probs=56.1
Q ss_pred CCCChHHHHHc-----HhhhccCCCCcEEEEeCCeec-CcCHHHHHHHHHHc----CCcEEEEEEeCCCC-CCcceEEEe
Q 022113 24 PLGTAGPLALA-----RDKLIDDTGEPFFVLNSDVIS-EYPFAEMIEFHKAH----GGEASIMVTKVDEP-SKYGVVVME 92 (302)
Q Consensus 24 ~~Gt~~al~~a-----~~~i~~~~~~~~lv~~gD~l~-~~~l~~~~~~~~~~----~~~~~l~~~~~~~~-~~~g~v~~d 92 (302)
|.|.|+-.... ++.+....-+.+.+.+.|.+. ..|. .++..+..+ +.++.+-+++...+ .+-|.+...
T Consensus 240 P~GhGdiy~aL~~sGlLd~l~~~Gieyi~v~nvDNlga~vDp-~~Lg~~~~~~~~~~~d~~~kVv~Kt~~dek~Gvl~~~ 318 (528)
T 3r3i_A 240 PPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGATVDL-YILNHLMNPPNGKRCEFVMEVTNKTRADVKGGTLTQY 318 (528)
T ss_dssp CCBTTTHHHHHHHHSHHHHHHHTTCCEEEEEETTBTTCCCCH-HHHHHHSSCSSSCCCSEEEEECCCCTTCCSSCEEECS
T ss_pred cCCChHHHHHHHHCChHHHHHhcCCEEEEEEccCCcccccCH-HHHHHHHhcccccCCcEEEEEeEccccCCcccEEEEE
Confidence 56666633322 233322223677888889954 4443 355666555 67777766655433 334555432
Q ss_pred CCCCc--EEEEEecCCCC--------CCCeEEEEEEEeCHhhHhhc
Q 022113 93 ESTGK--VEKFVEKPKLF--------VGNKINAGIYLLNPAVLDRI 128 (302)
Q Consensus 93 ~~~~~--v~~~~ekp~~~--------~~~~~~~Giy~~~~~~l~~l 128 (302)
+|+ ++++.|-|... .-.+.|++..+|+-++++.+
T Consensus 319 --dGk~~vvEyseip~e~~~~~~g~~~f~~~Ntnnlw~~L~~L~~v 362 (528)
T 3r3i_A 319 --EGKLRLVEIAQVPKAHVDEFKSVSKFKIFNTNNLWISLAAVKRL 362 (528)
T ss_dssp --SSSCEEECTTSSCGGGTTTSSCSSSCCCCEEEEEEEEHHHHHHH
T ss_pred --CCeEEEEEecCCChhHhhccCCcccCCeEEEEEEEEEHHHHHHH
Confidence 444 44444433221 12357899999998888654
No 186
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=20.12 E-value=46 Score=28.17 Aligned_cols=52 Identities=13% Similarity=0.018 Sum_probs=33.8
Q ss_pred CCCCCChHHHHHcHhhhccCCCCcEEEEeCCee-cCcC-HHHHHHHHHHc-CCcEEEE
Q 022113 22 TEPLGTAGPLALARDKLIDDTGEPFFVLNSDVI-SEYP-FAEMIEFHKAH-GGEASIM 76 (302)
Q Consensus 22 ~~~~Gt~~al~~a~~~i~~~~~~~~lv~~gD~l-~~~~-l~~~~~~~~~~-~~~~~l~ 76 (302)
++..|-+.|+..+..... .+-++++.+|.+ .+.+ +.++++.+.+. +.++...
T Consensus 114 ~~n~G~~~a~n~g~~~a~---gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g 168 (329)
T 3ckj_A 114 PIRPGKGEALWRSLAASR---GDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKS 168 (329)
T ss_dssp CCCCSHHHHHHHHHHHCC---CSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEE
T ss_pred CCCCCHHHHHHHHHHhCC---CCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEE
Confidence 344677777777776653 256677899998 7766 78888876554 3344433
Done!