Query 022114
Match_columns 302
No_of_seqs 82 out of 109
Neff 2.4
Searched_HMMs 29240
Date Mon Mar 25 14:13:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022114.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022114hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qqy_A Sigma B operon; dodecam 97.0 0.0014 4.8E-08 50.1 6.6 141 135-281 7-148 (149)
2 2fzf_A Hypothetical protein; s 96.8 0.0027 9.2E-08 51.4 6.7 126 139-276 21-160 (175)
3 2oh3_A Rubrerythrin, COG1633: 96.7 0.0029 9.8E-08 51.2 6.3 132 139-276 6-148 (167)
4 1vjx_A Putative ferritin-like 96.6 0.0028 9.6E-08 51.0 5.4 126 139-275 15-154 (157)
5 1nfv_A Bacterioferritin; 24 su 96.3 0.012 4E-07 47.4 7.2 137 135-276 8-145 (179)
6 1mxr_A Ribonucleotide reductas 96.2 0.0032 1.1E-07 58.3 3.9 135 134-271 188-350 (375)
7 2y3q_A Bacterioferritin; metal 96.0 0.012 4.1E-07 45.6 5.7 135 137-276 5-140 (158)
8 4dr0_A Ribonucleoside-diphosph 95.6 0.023 8E-07 52.6 7.1 126 130-271 165-322 (350)
9 3qb9_A Bacterioferritin, BFR; 95.4 0.037 1.3E-06 44.1 6.6 135 137-276 7-142 (174)
10 1jgc_A Bacterioferritin, BFR; 95.2 0.026 9E-07 43.8 5.1 135 137-276 5-140 (161)
11 2fkz_A Bacterioferritin; ferro 95.1 0.045 1.5E-06 41.9 6.1 135 137-276 5-140 (155)
12 3uoi_A Bacterioferritin, BFR; 94.5 0.048 1.7E-06 42.7 5.1 131 137-276 7-142 (161)
13 1zpy_A Hypothetical protein NE 93.3 0.038 1.3E-06 44.3 2.4 67 126-196 8-74 (95)
14 4am5_A Bacterioferritin; metal 92.9 0.21 7.2E-06 39.9 6.2 134 137-275 5-139 (159)
15 2vzb_A Putative bacterioferrit 92.8 0.35 1.2E-05 37.8 7.2 136 136-276 15-159 (170)
16 2c41_A DPS family DNA-binding 92.6 0.29 1E-05 39.0 6.6 148 130-282 2-158 (158)
17 1jk0_B RNR Y4, ribonucleoside- 92.6 0.089 3.1E-06 48.5 4.0 112 151-272 191-318 (345)
18 1jk0_A RNR Y2, ribonucleoside- 92.2 0.54 1.9E-05 44.9 9.0 112 151-272 263-391 (419)
19 2rcc_A Ribonucleoside-diphosph 92.0 0.078 2.7E-06 48.4 2.9 130 137-271 173-328 (346)
20 2vxx_A Starvation induced DNA 91.9 0.47 1.6E-05 39.3 7.3 149 129-280 19-175 (192)
21 1syy_A Ribonucleoside-diphosph 91.7 0.13 4.6E-06 47.0 4.1 131 136-271 178-332 (346)
22 2e0z_A Virus-like particle; ba 91.6 0.034 1.2E-06 52.2 0.0 56 137-194 18-73 (345)
23 3gvy_A Bacterioferritin; iron 91.5 0.53 1.8E-05 36.8 6.8 133 138-276 6-140 (161)
24 1vjx_A Putative ferritin-like 91.3 0.12 4.2E-06 41.4 3.1 55 139-195 101-155 (157)
25 3fvb_A Bacterioferritin; niaid 90.8 0.49 1.7E-05 38.8 6.2 136 136-276 25-161 (182)
26 4etr_A Putative uncharacterize 90.8 0.17 5.9E-06 41.0 3.5 72 129-202 2-73 (153)
27 3pvt_A Phenylacetic acid degra 90.6 0.16 5.5E-06 47.1 3.5 153 128-292 22-193 (311)
28 1j30_A 144AA long hypothetical 90.4 0.61 2.1E-05 36.9 6.2 126 139-275 9-138 (144)
29 2o1z_A Ribonucleotide reductas 90.2 0.1 3.5E-06 47.4 1.8 44 151-196 196-239 (311)
30 3ee4_A Probable ribonucleoside 89.4 0.12 4E-06 47.4 1.6 42 151-194 181-223 (323)
31 2oh3_A Rubrerythrin, COG1633: 89.4 0.24 8.4E-06 39.8 3.2 54 139-194 94-147 (167)
32 1h0o_A Ribonucleoside-diphosph 89.3 0.49 1.7E-05 44.6 5.7 43 151-195 238-280 (390)
33 3pf7_A Benzoyl-COA oxygenase c 89.2 0.15 5.2E-06 50.4 2.2 155 127-292 97-295 (481)
34 3pwf_A Rubrerythrin; non heme 88.3 0.35 1.2E-05 40.8 3.6 117 140-276 8-126 (170)
35 3k6c_A Uncharacterized protein 88.3 0.23 8E-06 39.9 2.4 66 127-196 9-74 (95)
36 1yuz_A Nigerythrin; rubrythrin 88.2 0.87 3E-05 39.2 6.1 131 140-276 30-162 (202)
37 2p1i_A Ribonucleotide reductas 88.1 0.17 6E-06 46.6 1.8 111 151-271 197-323 (349)
38 3mjo_A Ribonucleotide reductas 87.6 0.21 7.2E-06 45.0 2.0 38 151-190 172-209 (296)
39 1za0_A Possible acyl-[acyl-car 87.3 0.23 7.9E-06 45.5 2.0 45 148-194 157-201 (275)
40 1krq_A Ferritin; H-chain like 87.3 1.8 6.3E-05 35.1 7.2 135 138-276 5-140 (167)
41 3dhz_A Ribonucleotide reductas 86.8 0.24 8.2E-06 45.3 1.9 109 151-271 173-308 (329)
42 3ee4_A Probable ribonucleoside 86.8 1.3 4.6E-05 40.4 6.8 68 126-198 53-126 (323)
43 3n37_A Ribonucleoside-diphosph 86.7 0.25 8.6E-06 44.9 1.9 109 151-271 163-298 (319)
44 3r2k_A Bacterioferritin, BFR; 86.2 2.4 8.2E-05 32.8 7.0 133 137-276 5-140 (154)
45 4di0_A Rubrerythrin; ssgcid, s 85.8 1.2 4.2E-05 36.4 5.4 123 139-275 13-140 (144)
46 2fzf_A Hypothetical protein; s 84.4 0.59 2E-05 37.6 2.9 55 139-195 106-160 (175)
47 4a58_A Ribonucleoside-diphosph 84.0 0.39 1.3E-05 43.9 1.8 39 151-191 181-219 (324)
48 1eum_A Ferritin 1; ECFTNA, met 83.9 3.4 0.00012 33.3 7.2 135 138-276 5-140 (165)
49 2uw1_A Desaturase, plastid del 82.8 0.45 1.5E-05 45.0 1.8 45 150-194 171-216 (338)
50 2jd6_0 Ferritin homolog, ferri 82.4 3.2 0.00011 33.2 6.4 135 138-276 5-140 (174)
51 1s3q_A Ferritin; ferroxidase, 79.9 3.4 0.00012 34.0 5.9 136 137-276 6-142 (173)
52 3olj_A Ribonucleoside-diphosph 79.6 0.73 2.5E-05 41.2 1.9 49 142-194 166-214 (286)
53 3oj5_A Ferritin family protein 79.0 4.6 0.00016 33.1 6.4 135 138-276 10-145 (189)
54 3qhb_A Symerythrin, ORF180; fo 77.5 0.4 1.4E-05 41.4 -0.4 149 112-276 3-174 (179)
55 1za0_A Possible acyl-[acyl-car 77.1 1.1 3.9E-05 41.0 2.4 165 98-276 18-202 (275)
56 4di0_A Rubrerythrin; ssgcid, s 76.1 1.4 4.7E-05 36.1 2.4 56 140-195 84-141 (144)
57 2r2i_A Guanylyl cyclase-activa 76.0 6.3 0.00021 30.6 6.1 75 100-177 88-169 (198)
58 3bvf_A Ferritin; iron storage, 75.4 5.1 0.00018 33.0 5.7 122 137-262 18-140 (181)
59 2uw1_A Desaturase, plastid del 75.4 1.3 4.4E-05 41.9 2.3 54 230-283 85-142 (338)
60 2hz8_A De novo designed DIIRON 74.3 0.5 1.7E-05 39.0 -0.6 68 125-194 19-86 (115)
61 1g8i_A Frequenin, neuronal cal 73.1 3.9 0.00014 31.1 4.2 65 112-177 109-185 (190)
62 2o1z_A Ribonucleotide reductas 73.1 6.9 0.00024 35.5 6.5 143 126-276 74-238 (311)
63 2ggz_A Guanylyl cyclase-activa 72.4 7.6 0.00026 30.8 5.9 64 112-176 103-172 (211)
64 3e3r_A Calcyphosin, calcyphosi 72.2 14 0.00047 28.3 7.1 70 94-165 67-136 (204)
65 2l4h_A Calcium and integrin-bi 72.1 10 0.00035 30.8 6.6 64 112-176 139-211 (214)
66 1fpw_A Yeast frequenin, calciu 72.0 8.7 0.0003 29.1 5.9 65 112-177 109-185 (190)
67 2ovk_B RLC, myosin regulatory 71.3 6.7 0.00023 28.8 5.0 94 99-199 12-117 (153)
68 1wdc_B Scallop myosin; calcium 70.2 4.2 0.00014 30.0 3.7 53 112-165 97-149 (156)
69 1jfj_A Ehcabp, calcium-binding 70.1 15 0.00052 25.5 6.4 85 94-181 30-119 (134)
70 3qhb_A Symerythrin, ORF180; fo 69.8 1.9 6.6E-05 37.2 2.0 61 135-195 112-174 (179)
71 2ehb_A Calcineurin B-like prot 69.8 14 0.00046 28.8 6.7 75 100-177 111-193 (207)
72 1jba_A GCAP-2, protein (guanyl 69.4 10 0.00036 29.4 6.0 64 112-176 105-185 (204)
73 2l2e_A Calcium-binding protein 69.0 11 0.00039 28.6 6.0 31 146-177 155-185 (190)
74 2l2e_A Calcium-binding protein 68.0 8.9 0.0003 29.2 5.2 63 101-165 64-126 (190)
75 2p1i_A Ribonucleotide reductas 66.9 13 0.00044 34.2 7.0 143 126-276 75-239 (349)
76 1jfj_A Ehcabp, calcium-binding 66.3 5.9 0.0002 27.6 3.6 70 112-181 10-87 (134)
77 3pwf_A Rubrerythrin; non heme 66.1 2.5 8.7E-05 35.6 1.9 61 141-201 70-132 (170)
78 2zfd_A Calcineurin B-like prot 65.5 19 0.00064 28.9 6.9 65 112-177 132-204 (226)
79 3olj_A Ribonucleoside-diphosph 65.4 14 0.00048 32.9 6.7 143 126-276 50-215 (286)
80 1s6c_A KV4 potassium channel-i 65.3 9.2 0.00032 28.9 4.8 65 112-177 102-178 (183)
81 2v2p_A Ferritin light chain; m 64.2 13 0.00044 30.5 5.7 135 138-275 11-149 (174)
82 3fwb_A Cell division control p 63.9 9.7 0.00033 27.7 4.5 89 99-190 19-114 (161)
83 1rcd_A L ferritin; iron storag 63.4 14 0.00046 30.3 5.8 136 137-275 11-150 (173)
84 2jjz_A Ionized calcium-binding 62.2 7.8 0.00027 29.8 3.9 80 100-181 50-129 (150)
85 3qrx_A Centrin; calcium-bindin 61.1 7.6 0.00026 28.8 3.5 86 94-181 58-149 (169)
86 3j04_B Myosin regulatory light 61.0 8.9 0.00031 27.6 3.8 65 99-165 75-139 (143)
87 1y1x_A Leishmania major homolo 61.0 25 0.00085 27.3 6.7 64 95-166 58-121 (191)
88 2bl0_B Myosin regulatory light 60.7 21 0.0007 25.5 5.7 83 99-190 4-94 (145)
89 3ox6_A Calcium-binding protein 60.4 7.9 0.00027 27.7 3.4 87 101-190 9-106 (153)
90 1dgu_A Calcium-saturated CIB; 59.4 13 0.00044 28.3 4.6 63 112-175 108-179 (183)
91 2jul_A Calsenilin; EF-hand, ca 59.4 10 0.00035 31.3 4.4 99 81-181 110-225 (256)
92 2cih_A Ferritin heavy chain; a 59.2 17 0.00059 30.2 5.7 136 137-275 15-154 (183)
93 3qrx_A Centrin; calcium-bindin 59.0 9.7 0.00033 28.2 3.8 88 101-191 26-120 (169)
94 1j30_A 144AA long hypothetical 58.6 4.9 0.00017 31.7 2.2 58 139-196 81-140 (144)
95 2ehb_A Calcineurin B-like prot 58.6 24 0.00082 27.3 6.2 81 100-181 34-123 (207)
96 3qz3_A Ferritin; structural ge 58.2 17 0.00059 30.3 5.6 140 127-274 7-147 (184)
97 2aao_A CDPK, calcium-dependent 58.1 16 0.00055 26.9 4.9 70 94-165 57-126 (166)
98 4ds7_A Calmodulin, CAM; protei 56.9 9.7 0.00033 27.2 3.4 84 94-179 41-130 (147)
99 2itb_A TRNA-(MS(2)IO(6)A)-hydr 56.5 24 0.00083 31.5 6.5 111 78-197 53-168 (206)
100 1bjf_A Neurocalcin delta; calc 55.9 23 0.0008 26.8 5.6 63 112-175 109-183 (193)
101 1gjy_A Sorcin, CP-22, V19; cal 55.8 12 0.0004 28.2 3.8 75 112-192 82-156 (167)
102 1k9u_A Polcalcin PHL P 7; poll 55.8 6.3 0.00021 26.2 2.1 62 101-165 4-65 (78)
103 2f33_A Calbindin; EF-hand, Ca2 55.7 30 0.001 27.3 6.4 87 100-191 16-122 (263)
104 2lw1_A ABC transporter ATP-bin 55.7 5.4 0.00019 30.1 1.9 26 63-88 36-61 (89)
105 1juo_A Sorcin; calcium-binding 55.4 9.5 0.00033 29.7 3.4 90 97-192 90-187 (198)
106 2ovk_B RLC, myosin regulatory 55.4 9.7 0.00033 27.9 3.2 15 150-164 97-111 (153)
107 2znd_A Programmed cell death p 53.9 15 0.00053 27.6 4.2 75 112-190 84-158 (172)
108 3h4s_E KCBP interacting Ca2+-b 52.5 15 0.00051 27.6 4.0 73 99-173 39-112 (135)
109 1s6c_A KV4 potassium channel-i 52.3 21 0.00073 26.8 4.8 65 98-164 54-118 (183)
110 2jul_A Calsenilin; EF-hand, ca 51.9 15 0.00053 30.2 4.3 94 81-181 78-177 (256)
111 3bjd_A Putative 3-oxoacyl-(acy 51.8 7.7 0.00026 35.3 2.6 97 180-279 188-297 (332)
112 1k94_A Grancalcin; penta-EF-ha 51.3 41 0.0014 25.0 6.2 74 112-191 80-153 (165)
113 3dd4_A KV channel-interacting 51.1 13 0.00045 30.2 3.7 25 151-176 199-223 (229)
114 1wy9_A Allograft inflammatory 50.7 19 0.00063 27.6 4.3 81 100-182 48-128 (147)
115 1tjo_A Iron-rich DPSA-homolog 50.4 67 0.0023 26.2 7.9 149 129-280 20-176 (182)
116 1n1q_A DPS protein; four-helix 50.0 64 0.0022 24.9 7.3 138 132-274 2-148 (149)
117 3sjs_A URE3-BP sequence specif 50.0 13 0.00046 30.2 3.6 117 112-242 61-182 (220)
118 2bl0_B Myosin regulatory light 49.9 26 0.00088 25.0 4.7 83 94-181 35-124 (145)
119 2jnf_A Troponin C; stretch act 49.8 33 0.0011 24.9 5.4 87 101-190 11-109 (158)
120 1s1e_A KV channel interacting 49.4 35 0.0012 27.7 6.0 96 79-181 36-137 (224)
121 2mys_C Myosin; muscle protein, 49.0 45 0.0016 23.6 5.9 71 94-165 38-112 (149)
122 1lko_A Rubrerythrin all-iron(I 48.8 26 0.00089 29.5 5.2 132 138-276 8-141 (191)
123 1s1e_A KV channel interacting 48.7 30 0.001 28.1 5.4 67 97-165 86-152 (224)
124 3khe_A Calmodulin-like domain 47.3 23 0.0008 26.6 4.3 76 112-190 50-141 (191)
125 3i5g_B Myosin regulatory light 47.3 29 0.001 26.7 5.0 81 100-181 13-97 (153)
126 1g8i_A Frequenin, neuronal cal 47.2 18 0.00061 27.4 3.7 17 148-164 109-125 (190)
127 3sjs_A URE3-BP sequence specif 46.9 34 0.0012 27.7 5.6 64 94-165 81-144 (220)
128 2mys_B Myosin; muscle protein, 46.9 33 0.0011 25.3 5.1 33 148-180 105-142 (166)
129 2r2i_A Guanylyl cyclase-activa 46.8 39 0.0013 26.0 5.6 64 100-165 52-115 (198)
130 2qqy_A Sigma B operon; dodecam 46.7 13 0.00046 27.8 2.9 61 139-199 86-147 (149)
131 4ds7_A Calmodulin, CAM; protei 46.4 23 0.00078 25.2 4.0 79 101-181 12-96 (147)
132 2opo_A Polcalcin CHE A 3; calc 46.2 40 0.0014 22.6 5.0 65 100-167 11-75 (86)
133 2obh_A Centrin-2; DNA repair c 45.6 35 0.0012 25.0 5.0 65 94-165 36-106 (143)
134 1jk0_A RNR Y2, ribonucleoside- 45.6 30 0.001 33.1 5.7 143 126-276 140-306 (419)
135 2a9u_A Ubiquitin carboxyl-term 45.6 3.8 0.00013 34.2 -0.4 23 229-251 63-85 (144)
136 3uno_A Probable bacterioferrit 45.3 34 0.0012 28.8 5.4 135 137-275 9-144 (189)
137 2ggz_A Guanylyl cyclase-activa 45.2 34 0.0012 27.0 5.1 64 100-165 57-120 (211)
138 1fpw_A Yeast frequenin, calciu 44.5 20 0.00067 27.1 3.5 85 96-181 21-111 (190)
139 2f2o_A Calmodulin fused with c 44.5 25 0.00086 26.3 4.1 16 149-164 95-110 (179)
140 3fwb_A Cell division control p 44.1 20 0.00067 26.1 3.3 81 94-181 53-144 (161)
141 2clb_A DPS-like protein; DI-ir 43.8 30 0.001 28.7 4.8 140 136-279 23-172 (188)
142 1wdc_C Scallop myosin; calcium 43.8 20 0.00068 26.2 3.4 53 112-164 94-148 (156)
143 2be4_A Hypothetical protein LO 43.4 60 0.0021 25.7 6.4 88 98-190 9-122 (272)
144 3dtp_E RLC, myosin regulatory 43.2 26 0.0009 27.4 4.2 33 148-181 136-173 (196)
145 1bjf_A Neurocalcin delta; calc 42.9 56 0.0019 24.6 5.9 63 100-164 63-125 (193)
146 1y1x_A Leishmania major homolo 42.7 52 0.0018 25.5 5.8 93 97-193 80-180 (191)
147 4g5o_E G-protein-signaling mod 42.4 6.1 0.00021 25.2 0.3 16 267-282 2-17 (26)
148 3dtp_E RLC, myosin regulatory 41.9 32 0.0011 26.9 4.5 83 100-191 57-145 (196)
149 2xze_A STAM-binding protein; h 41.2 9.9 0.00034 31.3 1.5 23 229-251 61-84 (146)
150 2mys_B Myosin; muscle protein, 41.1 41 0.0014 24.9 4.8 72 112-191 35-114 (166)
151 1c7v_A CAVP, calcium vector pr 40.4 27 0.00093 23.1 3.4 67 98-167 7-74 (81)
152 1djx_A PLC-D1, phosphoinositid 40.0 15 0.00052 36.1 2.8 102 94-203 41-158 (624)
153 2aao_A CDPK, calcium-dependent 39.9 55 0.0019 24.0 5.3 76 112-190 37-117 (166)
154 3dd4_A KV channel-interacting 39.6 36 0.0012 27.6 4.6 61 100-161 64-125 (229)
155 3chh_A P-aminobenzoate N-oxyge 38.8 22 0.00076 32.9 3.6 66 128-195 175-240 (336)
156 2blf_B SORB, sulfite\:cytochro 38.7 46 0.0016 24.0 4.6 34 98-145 46-79 (81)
157 1top_A Troponin C; contractIle 38.5 39 0.0013 24.5 4.2 81 101-181 18-108 (162)
158 1dtl_A Cardiac troponin C; hel 38.4 43 0.0015 24.3 4.4 76 112-190 28-113 (161)
159 1dtl_A Cardiac troponin C; hel 38.3 74 0.0025 23.0 5.7 71 94-166 49-123 (161)
160 1alv_A Calpain, S-camld; calci 38.3 67 0.0023 24.1 5.7 76 112-192 87-162 (173)
161 3fs7_A Parvalbumin, thymic; ca 38.2 60 0.0021 22.6 5.0 78 95-181 5-93 (109)
162 2d8n_A Recoverin; structural g 38.0 20 0.00068 27.8 2.7 17 148-164 117-133 (207)
163 2bl0_C Myosin regulatory light 37.8 28 0.00097 24.8 3.3 70 112-181 16-91 (142)
164 2zfd_A Calcineurin B-like prot 37.7 57 0.0019 26.1 5.4 87 100-190 45-140 (226)
165 2pvb_A Protein (parvalbumin); 37.5 67 0.0023 22.3 5.2 75 97-180 6-91 (108)
166 2f2o_A Calmodulin fused with c 37.2 93 0.0032 23.1 6.3 9 170-178 85-93 (179)
167 3ox6_A Calcium-binding protein 37.2 42 0.0014 23.8 4.2 81 94-181 41-137 (153)
168 2mys_C Myosin; muscle protein, 37.1 68 0.0023 22.7 5.2 69 112-181 18-97 (149)
169 1vlg_A Ferritin; TM1128, struc 36.8 44 0.0015 26.9 4.7 136 136-275 17-153 (176)
170 1ji5_A DLP-1; dodecamer, four- 36.7 88 0.003 23.6 6.1 130 140-274 3-141 (142)
171 3khe_A Calmodulin-like domain 36.4 17 0.00057 27.4 2.0 81 99-181 86-169 (191)
172 2i7a_A Calpain 13; calcium-dep 36.3 74 0.0025 25.2 5.9 67 112-181 86-156 (174)
173 1top_A Troponin C; contractIle 36.1 39 0.0013 24.5 3.9 86 94-181 50-144 (162)
174 2ovk_C Myosin catalytic light 35.6 40 0.0014 24.7 3.9 65 99-165 84-150 (159)
175 2yuk_A Myeloid/lymphoid or mix 35.2 13 0.00044 28.8 1.1 32 151-182 27-66 (90)
176 2bl0_C Myosin regulatory light 35.0 35 0.0012 24.3 3.4 84 94-179 36-125 (142)
177 1rro_A RAT oncomodulin; calciu 35.0 89 0.0031 21.6 5.5 61 97-166 6-69 (108)
178 2be4_A Hypothetical protein LO 34.8 1.7E+02 0.0057 23.1 7.8 68 96-165 100-175 (272)
179 2pv4_A Uncharacterized protein 34.6 21 0.00073 30.6 2.5 65 102-174 38-138 (145)
180 1k94_A Grancalcin; penta-EF-ha 34.2 80 0.0027 23.4 5.4 62 96-165 36-97 (165)
181 1tiz_A Calmodulin-related prot 33.4 32 0.0011 21.6 2.7 53 112-164 11-63 (67)
182 1w7j_B Myosin light chain 1; m 33.3 24 0.00081 25.5 2.3 76 112-190 20-105 (151)
183 2lhi_A Calmodulin, serine/thre 33.3 54 0.0018 25.8 4.6 18 112-129 94-111 (176)
184 1s6i_A CDPK, calcium-dependent 33.1 31 0.0011 27.0 3.1 80 95-181 41-128 (188)
185 1jig_A DLP-2; dodecamer, four- 33.1 1.2E+02 0.004 23.2 6.4 135 135-274 2-145 (146)
186 2lmt_A Calmodulin-related prot 33.0 39 0.0013 25.1 3.5 70 112-181 20-95 (148)
187 3pm8_A PFCDPK2, calcium-depend 32.7 40 0.0014 26.6 3.7 88 100-190 54-147 (197)
188 1jba_A GCAP-2, protein (guanyl 32.7 76 0.0026 24.5 5.3 84 97-181 19-107 (204)
189 2kz2_A Calmodulin, CAM; TR2C, 32.3 50 0.0017 23.3 3.9 65 98-164 27-91 (94)
190 3nyv_A Calmodulin-domain prote 32.0 58 0.002 29.1 5.0 79 99-179 381-462 (484)
191 3ka8_A Ferritin, middle subuni 31.6 88 0.003 25.7 5.7 132 139-273 13-148 (176)
192 2f33_A Calbindin; EF-hand, Ca2 31.2 1.5E+02 0.005 23.3 6.7 80 100-181 103-203 (263)
193 1exr_A Calmodulin; high resolu 31.2 43 0.0015 24.4 3.5 81 94-181 40-131 (148)
194 1m45_A MLC1P, myosin light cha 30.9 41 0.0014 24.1 3.3 65 95-165 35-110 (148)
195 2qac_A Myosin A tail domain in 30.5 55 0.0019 23.6 3.9 74 94-178 45-129 (146)
196 2d8n_A Recoverin; structural g 30.3 99 0.0034 23.8 5.5 84 97-181 30-119 (207)
197 2d58_A Allograft inflammatory 30.0 46 0.0016 23.7 3.4 63 112-174 42-105 (107)
198 3e3r_A Calcyphosin, calcyphosi 30.0 60 0.0021 24.7 4.2 85 101-190 38-127 (204)
199 3r0s_A Acyl-[acyl-carrier-prot 29.8 52 0.0018 28.0 4.2 47 98-146 207-253 (266)
200 2rcc_A Ribonucleoside-diphosph 29.7 68 0.0023 29.1 5.1 149 126-280 65-241 (346)
201 1gjy_A Sorcin, CP-22, V19; cal 29.7 1.3E+02 0.0046 22.3 6.0 63 96-166 38-100 (167)
202 1m45_A MLC1P, myosin light cha 29.2 35 0.0012 24.5 2.6 53 112-164 93-145 (148)
203 3mse_B Calcium-dependent prote 29.1 78 0.0027 24.2 4.7 75 100-181 73-154 (180)
204 2gs4_A Protein YCIF; stress pr 29.1 50 0.0017 27.6 3.9 138 134-276 5-156 (166)
205 3ll8_B Calcineurin subunit B t 29.1 1.6E+02 0.0054 21.0 7.8 16 148-163 85-100 (155)
206 3uoi_A Bacterioferritin, BFR; 29.0 30 0.001 26.7 2.3 59 139-197 85-144 (161)
207 1rwy_A Parvalbumin alpha; EF-h 28.9 67 0.0023 22.3 4.0 17 148-164 51-67 (109)
208 3n37_A Ribonucleoside-diphosph 28.9 55 0.0019 29.6 4.4 141 125-273 42-202 (319)
209 2lmt_A Calmodulin-related prot 28.9 55 0.0019 24.3 3.7 81 94-181 40-131 (148)
210 3dka_A DINB-like protein; DINB 28.7 40 0.0014 25.2 2.9 32 169-200 116-147 (155)
211 1z6o_M Ferritin heavy chain; m 28.5 2.3E+02 0.0079 23.5 7.9 121 138-258 20-147 (191)
212 3e6s_A Ferritin; iron storage, 28.4 1E+02 0.0035 25.2 5.6 131 139-272 5-137 (168)
213 3mjo_A Ribonucleotide reductas 28.4 54 0.0019 29.3 4.2 140 126-273 52-211 (296)
214 1wdc_C Scallop myosin; calcium 28.1 68 0.0023 23.3 4.0 84 101-190 10-102 (156)
215 1bu3_A Calcium-binding protein 28.1 71 0.0024 22.2 4.0 78 95-181 5-93 (109)
216 2jnf_A Troponin C; stretch act 27.8 31 0.0011 25.1 2.2 16 95-110 65-80 (158)
217 1pva_A Parvalbumin; calcium bi 27.7 1.2E+02 0.0041 20.9 5.2 76 96-181 6-93 (110)
218 2y3q_A Bacterioferritin; metal 27.7 35 0.0012 25.9 2.5 58 139-196 83-141 (158)
219 1nfv_A Bacterioferritin; 24 su 27.6 37 0.0013 26.8 2.7 58 139-196 88-146 (179)
220 3dhz_A Ribonucleotide reductas 27.3 54 0.0018 29.8 4.1 141 125-273 52-212 (329)
221 2gyq_A YCFI, putative structur 27.0 53 0.0018 27.7 3.7 65 134-200 12-76 (173)
222 3gvy_A Bacterioferritin; iron 26.9 28 0.00097 26.9 1.9 59 139-197 83-142 (161)
223 1ggw_A Protein (CDC4P); light 26.9 43 0.0015 23.9 2.7 38 150-190 49-94 (140)
224 1wlz_A DJBP, CAP-binding prote 26.5 73 0.0025 22.2 3.8 66 98-165 22-87 (105)
225 3a4u_B Multiple coagulation fa 25.8 86 0.0029 23.9 4.4 62 99-162 67-140 (143)
226 2sas_A Sarcoplasmic calcium-bi 25.1 1.3E+02 0.0046 22.0 5.2 39 140-178 107-148 (185)
227 3li6_A Calcium-binding protein 24.9 60 0.002 20.4 2.9 25 140-164 38-62 (66)
228 2lhi_A Calmodulin, serine/thre 24.5 27 0.00093 27.5 1.4 70 112-181 21-96 (176)
229 2ktg_A Calmodulin, putative; e 24.5 1.1E+02 0.0038 20.2 4.3 53 112-164 24-76 (85)
230 1i11_A Transcription factor SO 24.5 24 0.00081 25.2 0.9 14 239-252 64-77 (81)
231 2joj_A Centrin protein; N-term 24.2 84 0.0029 20.3 3.6 62 101-164 8-69 (77)
232 4g5s_E PINS homolog, G-protein 24.1 27 0.00093 22.4 1.0 17 267-283 2-18 (26)
233 3ll8_B Calcineurin subunit B t 24.1 1.1E+02 0.0037 21.9 4.5 81 101-190 4-93 (155)
234 3pm8_A PFCDPK2, calcium-depend 23.8 32 0.0011 27.1 1.7 67 99-167 92-158 (197)
235 1utg_A Uteroglobin; steroid bi 23.7 63 0.0021 23.6 3.1 48 98-149 17-66 (70)
236 3u0k_A Rcamp; fluorescent prot 23.7 1.5E+02 0.0052 28.9 6.7 87 83-181 326-423 (440)
237 2znd_A Programmed cell death p 23.5 57 0.0019 24.4 2.9 79 100-181 7-86 (172)
238 1nya_A Calerythrin; EF-hand, m 23.5 1.3E+02 0.0043 22.0 4.8 73 104-178 62-145 (176)
239 5pal_A Parvalbumin; calcium-bi 23.4 79 0.0027 21.9 3.5 76 97-181 6-92 (109)
240 2hpk_A Photoprotein berovin; s 23.4 2.5E+02 0.0087 21.5 6.8 68 96-165 70-155 (208)
241 3cs1_A Flagellar calcium-bindi 23.3 78 0.0027 25.2 3.9 15 150-164 142-156 (219)
242 2jjz_A Ionized calcium-binding 23.1 90 0.0031 23.7 4.1 46 95-142 81-126 (150)
243 3j04_B Myosin regulatory light 22.9 78 0.0027 22.5 3.5 82 101-190 5-94 (143)
244 2obh_A Centrin-2; DNA repair c 22.6 83 0.0028 23.0 3.7 53 112-164 89-141 (143)
245 2ccm_A Calexcitin; EF hand, ca 22.3 1.7E+02 0.0057 22.0 5.4 101 81-181 31-155 (191)
246 3q5i_A Protein kinase; CDPK, m 22.1 86 0.0029 28.4 4.3 75 99-180 398-480 (504)
247 3lij_A Calcium/calmodulin depe 21.8 93 0.0032 28.1 4.5 73 99-178 389-469 (494)
248 2i7a_A Calpain 13; calcium-dep 21.8 92 0.0031 24.7 4.0 61 96-165 42-102 (174)
249 2kn2_A Calmodulin; S MAPK phos 21.7 1.4E+02 0.0046 20.1 4.4 63 100-164 9-71 (92)
250 3qb9_A Bacterioferritin, BFR; 21.7 49 0.0017 26.0 2.3 58 140-197 86-144 (174)
251 3h4s_E KCBP interacting Ca2+-b 21.6 84 0.0029 23.4 3.5 34 96-131 73-106 (135)
252 3i5g_B Myosin regulatory light 21.6 1.1E+02 0.0038 23.4 4.3 18 148-165 95-112 (153)
253 3bow_A Calpain-2 catalytic sub 21.4 1.2E+02 0.0042 29.8 5.6 93 81-182 549-653 (714)
254 1syy_A Ribonucleoside-diphosph 21.1 78 0.0027 28.8 3.8 151 126-281 63-249 (346)
255 1yuz_A Nigerythrin; rubrythrin 21.1 52 0.0018 28.1 2.5 59 141-199 106-166 (202)
256 1o9r_A Agrobacterium tumefacie 21.1 1.1E+02 0.0038 24.4 4.3 140 129-275 8-159 (162)
257 2a9g_A Arginine deiminase; arg 21.0 1.2E+02 0.004 28.3 5.1 85 93-183 46-132 (418)
258 2qac_A Myosin A tail domain in 21.0 95 0.0032 22.3 3.6 11 170-180 85-95 (146)
259 2b1u_A Calmodulin-like protein 21.0 47 0.0016 21.1 1.8 19 112-130 16-34 (71)
260 2bec_A Calcineurin B homologou 20.8 1.8E+02 0.0063 22.2 5.4 28 82-109 63-90 (202)
261 3sg6_A Gcamp2, myosin light ch 20.7 1.1E+02 0.0039 29.2 5.1 99 81-182 330-434 (450)
262 1ccd_A Clara cell 17 KD protei 20.3 74 0.0025 23.8 3.0 46 98-147 19-66 (77)
263 1jgc_A Bacterioferritin, BFR; 20.0 61 0.0021 24.7 2.5 57 139-195 83-140 (161)
No 1
>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}
Probab=97.05 E-value=0.0014 Score=50.11 Aligned_cols=141 Identities=16% Similarity=0.125 Sum_probs=98.2
Q ss_pred HHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-hhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccc
Q 022114 135 LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTF 213 (302)
Q Consensus 135 ~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTf 213 (302)
.++..++-|..-...|+.+...|.-+...+++.+ |.+++.|.-.+.+|..||.-|-+-+.+.|-..++. +.+-. ..
T Consensus 7 ~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~-~~~~~--~~ 83 (149)
T 2qqy_A 7 DVKELIEGLNEDLAGEYSAIIMYNHNAATVSGIYRQVLKPFFESEISDEQGHALYLAEKIKTLGGTPTTI-PLRVK--QA 83 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCC-CCCCC--CC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCC-CCCCC--CC
Confidence 4567899999999999999999999999996554 67999999999999999999999988888665542 21111 12
Q ss_pred ccchhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHhhCccch
Q 022114 214 FKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFL 281 (302)
Q Consensus 214 F~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmraqP~ll 281 (302)
..+.=++=...=.|+-.-..|=.+...-++..+.... ++++.--++|-+|-..+..++..-|..+
T Consensus 84 ~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~---~~l~~~~~eee~h~~~l~~~l~~~~~~~ 148 (149)
T 2qqy_A 84 EDVREMLEYARQSEYETIKRYEKRKEQAANLNMTELV---VKLEDMIADETNHMEELDRLLNDKAMVL 148 (149)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH---HHHHHHHHHHHHHHHHHHHHHC------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH---HHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 2344455555555665444444444444445555544 5555557899999999999998755544
No 2
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=96.79 E-value=0.0027 Score=51.42 Aligned_cols=126 Identities=17% Similarity=0.155 Sum_probs=86.3
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhccc-ccccccccccc-cCccccccc
Q 022114 139 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDF-NYALDLGFLTK-ARKYTFFKP 216 (302)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df-~l~lDLgfLtk-~k~YTfF~P 216 (302)
..+.|......|-.+.-.|..++++. +||.++++|..+|.+|.+|+..+.+-+..+ | +... +.. ...+..+.|
T Consensus 21 ~~e~L~~A~~~E~~a~~~Y~~~A~~~--~~~~~~~~f~~lA~~E~~H~~~l~~~~~~l~g-~~~~--~~~~~~~~~~~~~ 95 (175)
T 2fzf_A 21 LEELLGMAIKAEIGAREFYKSLAEKI--KIEALKEKINWLAEEEKKHEALLRKLYSQMFP-GKEV--VFPKEHIGPELQP 95 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSC--CCTTHHHHHHHHHHHTHHHHHHHHHHHHHHST-TCCC--CCCSCCBSCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCC--cchhhhhhhhhhh
Confidence 57888999999999999999999988 669999999999999999999999998865 2 1111 111 111111111
Q ss_pred h-----------hhhhhhhhccccchhhHHHHHHHhhhC-CCCcccchhhhhHhhhhccccchhHHHHHHhh
Q 022114 217 K-----------FIFYATYLSEKIGYWRYITIYRHLKAN-PEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (302)
Q Consensus 217 k-----------fIfYAtYLSEKIGYwRYItIyRHLe~~-Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (302)
. .++=.-.-.| ..-|..|+.+-+. ++ --+=+-|+.=.+||-+|.+.|..++..
T Consensus 96 ~~~~~~~~~~~~~~L~~ai~~E----~~a~~~Y~~~a~~~~d---~~~r~l~~~ia~eE~~H~~~l~~~l~~ 160 (175)
T 2fzf_A 96 VARELEKVQDIIDLIRWAMKAE----EIAAEFYLKLEEMVKE---EEKKRLMRYLADMERGHYYTLRAEYEL 160 (175)
T ss_dssp CCSCCCSHHHHHHHHHHHHHHH----HHHHHHHHHHHHTSCS---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhccccCCHHHHHHHHHHHH----HHHHHHHHHHHhhCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1111111112 2356677777665 33 335566788889999999999887754
No 3
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=96.71 E-value=0.0029 Score=51.18 Aligned_cols=132 Identities=15% Similarity=0.146 Sum_probs=86.8
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcc-cChhHHHHhhccccchhhhhhhhhhhhcccccc--ccccccccc-------
Q 022114 139 FVEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYA--LDLGFLTKA------- 208 (302)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~-~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~--lDLgfLtk~------- 208 (302)
..+.|...+..|-.|.-.|..+++.+++ .||.++++|..||.||.+|+..|-+-.....+. -...++...
T Consensus 6 ~~e~L~~Ai~~E~~~~~~Y~~lA~~~~~~~~~~~k~~f~~LA~eE~~H~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (167)
T 2oh3_A 6 LAEFLAHAIALETEAAERYVELADMMEAHNNLDTATVFRDMARFSTLHGDEIKQRSRALELPKLMSWQYRWKTPPEVGDE 85 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCGGGTSCCCCCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccccCCCcHhhhhH
Confidence 6788999999999999999999995443 599999999999999999999998876653221 011110000
Q ss_pred -CccccccchhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHhh
Q 022114 209 -RKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (302)
Q Consensus 209 -k~YTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (302)
..-..+.+..++=.-.-.|+-++--|-.+ .++-++-...- -|+.=.+||-.|-+.+..++..
T Consensus 86 ~~~~~~~~~~~~l~~A~~~E~~a~~fY~~~---a~~~~d~~~k~---~~~~la~eE~~H~~~l~~~~~~ 148 (167)
T 2oh3_A 86 NDIHYLMTPYHALRYARDNEIRGMEYYKEA---AANSADPEVKR---LGADFAAEEAEHVVALDKWIEK 148 (167)
T ss_dssp ---CGGGSHHHHHHHHHHHHHHHHHHHHHH---HHHCCCHHHHH---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccCCHHHHHHHHHHHHHHHHHHHHHH---HHHCCCHHHHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 00011223344444455566665544443 23345544443 4666678899999999988763
No 4
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=96.59 E-value=0.0028 Score=51.05 Aligned_cols=126 Identities=20% Similarity=0.183 Sum_probs=80.1
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccccc-cccccccCcccccc--
Q 022114 139 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALD-LGFLTKARKYTFFK-- 215 (302)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lD-LgfLtk~k~YTfF~-- 215 (302)
+.+.|...+..|-.|.-.|+.++. . +||.++++|..||.+|.+|+.+|.+... .+..-+ .++|...-.-.+|+
T Consensus 15 ~~e~L~~Ai~~E~~~~~~Y~~lA~-~--~~~~~k~lF~~LA~eE~~H~~~l~~l~~-~~~~~~~~~~l~~~~~~~~f~~~ 90 (157)
T 1vjx_A 15 VSDILTVAIRLEEEGERFYRELSE-H--FNGEIKKTFLELADQERIHAEIFRKMSD-QENWDEVDSYLAGYAFYEVFPDT 90 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT-S--CCSHHHHHHHHHHHHHHHHHHHHHHHHH-HSCHHHHTCBCCSBCCCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-c--CCHHHHHHHHHHHHHHHHHHHHHHHhhc-cCcchhHHHHHHhhhhhhccchh
Confidence 567888899999999999999999 6 8999999999999999999999998754 221011 12221111112222
Q ss_pred -c---------hhhhhhhhhccccchhhHHHHHHHhhhC-CCCcccchhhhhHhhhhccccchhHHHHHHh
Q 022114 216 -P---------KFIFYATYLSEKIGYWRYITIYRHLKAN-PEFQCYPIFKYFENWCQDENRHGDFFSALMK 275 (302)
Q Consensus 216 -P---------kfIfYAtYLSEKIGYwRYItIyRHLe~~-Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmr 275 (302)
+ ..++=.-.-.|+- =|..|+.+... |+-... +-|+.=-++|..|...+..++.
T Consensus 91 ~~~~~~~~~~~~~~l~~ai~~E~~----a~~~Y~~~a~~~~d~~~k---~l~~~la~eE~~H~~~l~~~~~ 154 (157)
T 1vjx_A 91 SEILRRKDLTLKEVLDIAISVEKD----SIILYYELKDGLVNSDAQ---KTVKKIIDQEKEHLRKLLEMKR 154 (157)
T ss_dssp TTGGGCSCCCHHHHHHHHHHHHHH----HHHHHHHHHHHCCSHHHH---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccccCHHHHHHHHHHHHHH----HHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHHHHHHHh
Confidence 1 1111111122222 33456665543 443333 4456667889999998887765
No 5
>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*
Probab=96.25 E-value=0.012 Score=47.41 Aligned_cols=137 Identities=15% Similarity=0.162 Sum_probs=101.1
Q ss_pred HHHHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccc
Q 022114 135 LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTF 213 (302)
Q Consensus 135 ~r~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTf 213 (302)
.++..++.|..-+..|+.+...|..++..+++. .|.+++.|.-+|.+|..||--|-+-+.+.|-...++.+.+-.. .
T Consensus 8 ~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~~~~~~~-~- 85 (179)
T 1nfv_A 8 RKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVT-G- 85 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSSCCCC-S-
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCcCCCCCcCCC-C-
Confidence 455688999999999999999999999999764 4999999999999999999999999998887776655432211 1
Q ss_pred ccchhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHhh
Q 022114 214 FKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (302)
Q Consensus 214 F~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (302)
-.+.=++=...=.|+-.-..|-.+...-+...+. .+-++|+...++|-.|-+.|..++..
T Consensus 86 ~~~~e~l~~al~~E~~~~~~y~~l~~~a~~~~D~---~t~~~l~~~~~eEe~h~~~l~~~l~~ 145 (179)
T 1nfv_A 86 QAVPVIYESDADQEDATIEAYSQFLKVCKEQGDI---VTARLFERIIEEEQAHLTYYENIGSH 145 (179)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2344455555566665545555554444455554 45566666778899999999888763
No 6
>1mxr_A Ribonucleotide reductase R2; radical protein, DI iron, oxidoreductase; 1.42A {Escherichia coli} SCOP: a.25.1.2 PDB: 1jpr_A 1jqc_A 1xik_A 3uus_E* 1yfd_A 1piy_A 1r65_A 2xof_A* 1biq_B* 1rsv_A 1piz_A 1piu_A 1pim_A 1rsr_A 1biq_A* 1rib_A 1mrr_A 1rnr_A* 1pj0_A 1pj1_A ...
Probab=96.18 E-value=0.0032 Score=58.34 Aligned_cols=135 Identities=23% Similarity=0.254 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHhhhhcc----ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccc-ccccccc--
Q 022114 134 PLRQIFVEFLERSCTAE----FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYA-LDLGFLT-- 206 (302)
Q Consensus 134 ~~r~~FidFLerScTaE----FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~-lDLgfLt-- 206 (302)
+.++.|..-|+-+..-| +|||...--+++|. .-|-++++..+.+|||+.|..|.-..++.+.-+ -|-...+
T Consensus 188 ~~~~~~~~~lva~~~lEgi~FysgF~~~~~l~~~g--~m~G~~~~i~lI~RDE~lH~~~~~~l~~~l~~~~e~p~~~~~~ 265 (375)
T 1mxr_A 188 ELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERE--LMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 265 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChhhHHhh
Confidence 35566766666665556 68887766888885 789999999999999999998876555543322 1211111
Q ss_pred ---ccCccccccchh---hhhhhhhccc---c--------chhhHHHH--HHHhhhCCCC--cccchhhhhHhhhhcccc
Q 022114 207 ---KARKYTFFKPKF---IFYATYLSEK---I--------GYWRYITI--YRHLKANPEF--QCYPIFKYFENWCQDENR 265 (302)
Q Consensus 207 ---k~k~YTfF~Pkf---IfYAtYLSEK---I--------GYwRYItI--yRHLe~~Pe~--rf~PIFk~Fe~WCqDEnR 265 (302)
+.+-|..|+--. +=|+.|+-+. | .|-||++= ...|---|-+ .-.|+ .|+++|.+-..-
T Consensus 266 ~~~~~~i~~l~~eave~E~~~~~~~~~~~~~~Gl~~~~~~~Yi~y~an~rL~~LG~~~~y~~~~nP~-~w~~~~~~~~~~ 344 (375)
T 1mxr_A 266 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPI-PWINTWLVSDNV 344 (375)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHTTTCCBTTBSHHHHHHHHHHHHHHHHHHTTCCCCSCCCCCSC-GGGGGTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCH-HHHHHHHhhccc
Confidence 122222221100 1144444322 3 47888883 3355444443 36774 999999865445
Q ss_pred chhHHH
Q 022114 266 HGDFFS 271 (302)
Q Consensus 266 HGdfFa 271 (302)
+-|||.
T Consensus 345 ~~nFFE 350 (375)
T 1mxr_A 345 QVAPQE 350 (375)
T ss_dssp ------
T ss_pred ccCCCc
Confidence 678885
No 7
>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*
Probab=95.97 E-value=0.012 Score=45.59 Aligned_cols=135 Identities=14% Similarity=0.044 Sum_probs=101.1
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccc
Q 022114 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (302)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~ 215 (302)
+..++.|..-...|+.+...|.-++..+++. -|.+++.|.-.|.+|..||--|-+-+...|-..++..+.+-.. . ..
T Consensus 5 ~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~~~~~-~-~~ 82 (158)
T 2y3q_A 5 TKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNI-G-ED 82 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC-C-SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCcCCC-C-CC
Confidence 4578899999999999999999999999644 4889999999999999999999998888887666655443221 1 34
Q ss_pred chhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHhh
Q 022114 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (302)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (302)
+.=++=+..=.|+-.-..|=.+...-+...+. .+-++++...+||-.|-+.+..++..
T Consensus 83 ~~e~l~~~l~~E~~~~~~y~~~~~~a~~~~D~---~t~~~l~~~~~ee~~h~~~l~~~l~~ 140 (158)
T 2y3q_A 83 VEEMLRSDLALELDGAKNLREAIGYADSVHDY---VSRDMMIEILRDEEGHIDWLETELDL 140 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566666666766555555555555555554 45566666788999999999988754
No 8
>4dr0_A Ribonucleoside-diphosphate reductase subunit beta; ribonucleotide reductase, manganese, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=95.62 E-value=0.023 Score=52.60 Aligned_cols=126 Identities=24% Similarity=0.305 Sum_probs=65.7
Q ss_pred cCChHHHHHHHHHHHhhhhcc----ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhh----hhhhcccccccc
Q 022114 130 KMQGPLRQIFVEFLERSCTAE----FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFL----NKGLSDFNYALD 201 (302)
Q Consensus 130 ~l~~~~r~~FidFLerScTaE----FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFl----Nkal~Df~l~lD 201 (302)
+.+.+.++.|..=|+-++.-| +|||...--+++|. +-|-++++.++.+|||+.|..|. +..+....-...
T Consensus 165 ~~~~~~~~~~~~~lva~~~lEGi~FysgF~~~~~l~~~g--~m~G~~~~i~~I~RDE~lH~~f~~~l~~~l~~~~~~e~~ 242 (350)
T 4dr0_A 165 AIQKDDEISLFKAMVASVYLESFLFYSGFYYPLYFYGQG--KLMQSGEIINLILRDEAIHGVYVGLLAQEIYNKQTEEKK 242 (350)
T ss_dssp TCCTTCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHTTT--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHH
T ss_pred hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 333333455666666666555 57887777788865 78999999999999999999874 222222111000
Q ss_pred cccccccCccccccchhhh------------hhhhhccccc-------hhhHHHHHH--HhhhCCCC---cccchhhhhH
Q 022114 202 LGFLTKARKYTFFKPKFIF------------YATYLSEKIG-------YWRYITIYR--HLKANPEF---QCYPIFKYFE 257 (302)
Q Consensus 202 LgfLtk~k~YTfF~PkfIf------------YAtYLSEKIG-------YwRYItIyR--HLe~~Pe~---rf~PIFk~Fe 257 (302)
+ . + -.+|+ |+.||-+.|| |=||++=-| .|---|-+ ...|+ +.
T Consensus 243 -----~--e---~-~~~i~~l~~eave~E~~~~~~~~~~iGl~~~~~~Yi~y~An~~L~~LG~~~~y~~~~~nP~---~~ 308 (350)
T 4dr0_A 243 -----A--E---L-REFAIDLLNQLYENELEYTEDLYDQVGLSHDVKKFIRYNANKALMNLGFDPYFEEEDINPI---VL 308 (350)
T ss_dssp -----H--H---H-HHHHHHHHHHHHHHHHHHHHHHHGGGTCHHHHHHHHHHHHHHHHHHTTCCCCSCCCCCCHH---HH
T ss_pred -----H--H---H-HHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCch---HH
Confidence 0 0 0 01122 4555556676 667766333 22222222 24676 56
Q ss_pred hhhhccccchhHHH
Q 022114 258 NWCQDENRHGDFFS 271 (302)
Q Consensus 258 ~WCqDEnRHGdfFa 271 (302)
+|..++..+-|||.
T Consensus 309 ~~~~~~~k~~nFFE 322 (350)
T 4dr0_A 309 NGLNTKTKSHDFFS 322 (350)
T ss_dssp HTC-----------
T ss_pred HhcccccCcCCCCc
Confidence 69999888899997
No 9
>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A*
Probab=95.37 E-value=0.037 Score=44.14 Aligned_cols=135 Identities=16% Similarity=0.038 Sum_probs=100.9
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccc
Q 022114 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (302)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~ 215 (302)
+..++.|...+..|+.+...|.-++..+++. -|.+++.|.-.|.+|..||.-|-+-+.+.|-..+++.+.+-.. ...
T Consensus 7 ~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~i~~~~~--~~~ 84 (174)
T 3qb9_A 7 PDVLRLLNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRI--GQT 84 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC--CSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccccCCCCCCC--CCC
Confidence 4578999999999999999999999999764 4899999999999999999999889988887777766544332 234
Q ss_pred chhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHhh
Q 022114 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (302)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (302)
+.=++=+..=.|+-.-..|-.+...-+..-+.. +-++|+.-.++|-.|-+.+...++.
T Consensus 85 ~~e~l~~al~~E~~~~~~y~~l~~~a~~~~D~~---t~~~l~~~l~eEe~h~~~l~~~l~~ 142 (174)
T 3qb9_A 85 LREQFEADLAIEYDVLNRLKPGIVMCREKQDTT---SAVLLEKIVADEEEHIDYLETQLEL 142 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555666666666655555555544445555544 4455665677899999999887764
No 10
>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1
Probab=95.21 E-value=0.026 Score=43.79 Aligned_cols=135 Identities=18% Similarity=0.068 Sum_probs=98.7
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccc
Q 022114 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (302)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~ 215 (302)
+..++.|..-...|+.+...|.-++..+++. -|.+++.|.-++.+|..||.-|-+-+.+.|-..++..+.+-+. . -.
T Consensus 5 ~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~~~~~-~-~~ 82 (161)
T 1jgc_A 5 AKVIEFLNAALRSELTAISQYWVHFRLQEDWGLAKMAKKSREESIEEMGHADKIIARILFLEGHPNLQKLDPLRI-G-EG 82 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC-C-SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCcCCC-C-CC
Confidence 4578899999999999999999999999764 5789999999999999999999999988887666654432221 1 23
Q ss_pred chhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHhh
Q 022114 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (302)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (302)
+.=++=+.+-.|+-.-..|-.+...-+.. .-+.+-++|+...++|-.|-+.+..++..
T Consensus 83 ~~e~l~~~l~~E~~~~~~~~~~~~~a~~~---~D~~t~~~l~~~~~ee~~h~~~l~~~l~~ 140 (161)
T 1jgc_A 83 PRETLECDLAGEHDALKLYREARDYCAEV---GDIVSKNIFESLITDEEGHVDFLETQISL 140 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555655444444444443333 34456677777789999999999988753
No 11
>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A*
Probab=95.08 E-value=0.045 Score=41.94 Aligned_cols=135 Identities=17% Similarity=0.068 Sum_probs=94.4
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccc
Q 022114 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (302)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~ 215 (302)
+..++-|..-...|+.+...|.-++..+++. -+.+++.|.-.+.+|..||.-|-+-+.+.|-..++..+.+-..- ..
T Consensus 5 ~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~~~~~~~~--~~ 82 (155)
T 2fkz_A 5 KIVIQHLNKILGNELIAINQYFLHARMYEDWGLEKLGKHEYHESIDEMKHADKLIKRILFLEGLPNLQELGKLLIG--EH 82 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCC--SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCC--CC
Confidence 4578889999999999999999999999764 47788888888999999999999999988877666543332211 13
Q ss_pred chhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHhh
Q 022114 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (302)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (302)
+.=++=+.+=-|+-.-..|=.+...-+.. .-+.+-++|+...++|-.|-..+..++..
T Consensus 83 ~~e~l~~~l~~E~~~~~~~~~~~~~a~~~---~D~~t~~~l~~~~~eee~h~~~l~~~l~~ 140 (155)
T 2fkz_A 83 TKEMLECDLKLEQAGLPDLKAAIAYCESV---GDYASRELLEDILESEEDHIDWLETQLDL 140 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444333333333333333 34556677777788899999999988753
No 12
>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*
Probab=94.55 E-value=0.048 Score=42.69 Aligned_cols=131 Identities=15% Similarity=0.057 Sum_probs=96.2
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccc
Q 022114 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (302)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~ 215 (302)
+..++.|-+-...|+.....|.-++..+++. .+.+++.|.-.+.+|..||--|=+-+.+.|-...++-+.+-..- -.
T Consensus 7 ~~~~~~Ln~~la~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Had~l~e~i~~lGg~p~~~~~~~~~~~--~~ 84 (161)
T 3uoi_A 7 PDVLRLLNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRIG--QT 84 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCC--SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCCCCCC--CC
Confidence 4578899999999999999999999999765 58999999999999999999999998888877766554432111 12
Q ss_pred chhhhhhhhhccccchhhHHHHHHHh----hhCCCCcccchhhhhHhhhhccccchhHHHHHHhh
Q 022114 216 PKFIFYATYLSEKIGYWRYITIYRHL----KANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (302)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHL----e~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (302)
+.=++=+.+=.|+- .|..||.+ ++.. -+.+-++|+....||-.|.++|..+++.
T Consensus 85 ~~e~l~~~l~~E~~----~~~~~~~~~~~A~~~~---D~~t~~~l~~~~~eee~h~~~l~~~l~~ 142 (161)
T 3uoi_A 85 LREQFEADLAIEYD----VLNRLKPGIVMCREKQ---DTTSAVLLEKIVADEEEHIDYLETQLEL 142 (161)
T ss_dssp HHHHHHHHHHHHHH----HHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333443 44455554 4444 4556677888899999999999988764
No 13
>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A
Probab=93.31 E-value=0.038 Score=44.29 Aligned_cols=67 Identities=16% Similarity=0.183 Sum_probs=57.6
Q ss_pred HHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhccc
Q 022114 126 EAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDF 196 (302)
Q Consensus 126 ~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df 196 (302)
...+.|++++|..= -..+|..+|.-+.=+|..+.... +||.++.++.-++.+|..|+|-+-+.|...
T Consensus 8 e~~~~ls~~~~d~~--rai~aL~~EleAI~~Y~q~A~~t--~D~evk~vl~~iadEEkeH~g~~l~~Lrr~ 74 (95)
T 1zpy_A 8 EPTQELSDETRDMH--RAIISLREELEAVDLYNQRVNAC--KDKELKAILAHNRDEEKEHAAMLLEWIRRC 74 (95)
T ss_dssp SCGGGSCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHcCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34577888888743 35569999999999999999987 899999999999999999999998888765
No 14
>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A*
Probab=92.95 E-value=0.21 Score=39.89 Aligned_cols=134 Identities=19% Similarity=0.152 Sum_probs=107.0
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccc
Q 022114 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (302)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~ 215 (302)
+.-|+.|-+-...|++....|--.++-.++. -+.+++.|.--|.+|-.||--|=+-+.+.|-.+.++-+.+.+ .+-.
T Consensus 5 ~kvi~~LN~~l~~El~A~~~Y~~~a~~~~~~g~~~~a~~f~~~a~eE~~HA~~l~~~i~~lGG~p~~~~~~~~~--~~~~ 82 (159)
T 4am5_A 5 QKVIEYLNRGLRSELTAVSQYWLHYRMLEDWGYKDLAKKWRAESIEEMAHADKFVERILFLEGLPNLQTLDPLR--IGQT 82 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBCCCCC--CCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccccccccc--cchh
Confidence 3478999999999999999999888887654 689999999999999999999988899999888887765443 2345
Q ss_pred chhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHh
Q 022114 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMK 275 (302)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmr 275 (302)
|.=++=+.+=-|+-.=..|-.+..+-+..-++...-+|.|| -.||-.|-+.|..++.
T Consensus 83 ~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~i---l~eEeeH~~~l~~~L~ 139 (159)
T 4am5_A 83 VKEVLESDLAAEREARALYQEGAAYAASVGDFPSKNLFEEL---MGDEEHHIDFLETQLD 139 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 66667777777777777777777788887776666555554 4689999999987765
No 15
>2vzb_A Putative bacterioferritin-related protein; DPS, DPSL, iron, oxidative stress, metal transport; 2.30A {Bacteroides fragilis}
Probab=92.78 E-value=0.35 Score=37.82 Aligned_cols=136 Identities=14% Similarity=0.173 Sum_probs=95.1
Q ss_pred HHHHHHHHHhhhhccccchhhHHHHhhhhcccC-hhHHHHhhccccchhhhhhhhhhhhccccccccccc---ccccCcc
Q 022114 136 RQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF---LTKARKY 211 (302)
Q Consensus 136 r~~FidFLerScTaEFSGflLyKEl~rrlk~~n-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf---Ltk~k~Y 211 (302)
++..++-|-.-+..|+.....|.-++..+++.+ +.+++.|.-.|.+|..||--|-+-+.+.|-..++.. +.+.+ -
T Consensus 15 ~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Had~lae~i~~lGg~p~~~~~~~~~~~~-~ 93 (170)
T 2vzb_A 15 VKSLIDQLNAALSEEWLAYYQYWVGALVVEGAMRADVQGEFEEHAEEERHHAQLIADRIIELEGVPVLDPKKWFELAR-C 93 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCGGGHHHHCS-S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCHHHHHHhhc-C
Confidence 456789999999999999999999999996542 556777777799999999999999999887777665 54432 1
Q ss_pred cc-----ccchhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHhh
Q 022114 212 TF-----FKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (302)
Q Consensus 212 Tf-----F~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (302)
.+ +.+.=++=+..=.|+- -+..|+.+-+.-+..-+.+-++|+...++|-.|-..|..++..
T Consensus 94 ~~~~~~~~~~~e~l~~~l~~E~~----~~~~~~~~~~~a~~~D~~t~~~l~~~~~ee~~h~~~l~~~l~~ 159 (170)
T 2vzb_A 94 KYDSPTAFDSVSLLNQNVSSERC----AILRYQEIANFTNGKDYTTCDIAKHILAEEEEHEQDLQDYLTD 159 (170)
T ss_dssp CCCCCCSCBHHHHHHHHHHHHHH----HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHH----HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1233333333333444 3444554433222225567778887889999999999988753
No 16
>2c41_A DPS family DNA-binding stress response protein; iron-binding/oxidation protein, DPS (DNA-binding proteins from starved cells); HET: PG4 PGE; 1.81A {Thermosynechococcus elongatus}
Probab=92.58 E-value=0.29 Score=39.02 Aligned_cols=148 Identities=9% Similarity=0.017 Sum_probs=115.5
Q ss_pred cCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-hhHHHHhhccccchhhhhhhhhhhhccccccccccc----
Q 022114 130 KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF---- 204 (302)
Q Consensus 130 ~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf---- 204 (302)
.++++.++..++-|-.-...|+.....|+-....++..+ +.+.+.|.-.+-+|..||--|-.-+.+.|-..+++.
T Consensus 2 ~~~~~~~~~v~~~LN~~La~e~~~~~~y~~~hw~v~g~~f~~lh~~~~~~~~ee~~had~iaErI~~lGg~p~~~~~~~~ 81 (158)
T 2c41_A 2 SATTTLKEQVLTTLKREQANAVVMYLNYKKYHWLTYGPLFRDLHLLFEEQGSEVFAMIDELAERSLMLDGQPVADPADYL 81 (158)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSGGGHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheECcChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHH
Confidence 367888999999999999999999999999999997664 668999999999999999999999999999998875
Q ss_pred ----ccccCccccccchhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHhhCccc
Q 022114 205 ----LTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQF 280 (302)
Q Consensus 205 ----Ltk~k~YTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmraqP~l 280 (302)
+...+. +..++=++=...=.|+..=.+|=.+...-+..-++.-..+ ++...+++-.|-.++.+.++.-|+.
T Consensus 82 ~~s~i~~~~~--~~~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~~l---l~~~l~~~Ek~~w~l~~~l~~~~g~ 156 (158)
T 2c41_A 82 KVATVTPSSG--QLTVKQMIEEAIANHELIITEMHQDAEIATEAGDIGTADL---YTRLVQTHQKHRWFLKEFLAKGDGL 156 (158)
T ss_dssp HHCCSCCCCS--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH---HHHHHHHHHHHHHHHHHHTCCCCSS
T ss_pred HHCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH---HHHHHHHHHHHHHHHHHHhccCCCC
Confidence 344444 4467667766666666655556566665666666555555 4555667899999999999887776
Q ss_pred hh
Q 022114 281 LN 282 (302)
Q Consensus 281 l~ 282 (302)
|+
T Consensus 157 ~~ 158 (158)
T 2c41_A 157 VS 158 (158)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 17
>1jk0_B RNR Y4, ribonucleoside-diphosphate reductase small chain 2; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1sms_A
Probab=92.55 E-value=0.089 Score=48.48 Aligned_cols=112 Identities=12% Similarity=0.105 Sum_probs=50.3
Q ss_pred ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccchh---hhhhhhh--
Q 022114 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKF---IFYATYL-- 225 (302)
Q Consensus 151 FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~Pkf---IfYAtYL-- 225 (302)
+|||...--+++|. .-|-++++..+.+|||+.|..|.-.-.+..--.. .+.+-+..++--. +=|+.++
T Consensus 191 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~~~-----~~~~v~~l~~eave~E~~~~~~~l~ 263 (345)
T 1jk0_B 191 AGNYASMFWLTDKK--IMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKP-----NPKIIEKIITEAVEIEKEYYSNSLP 263 (345)
T ss_dssp HHHHHHHHHHTSSS--SCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCC-----CHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHcC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-----CHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 47888777788875 7899999999999999999987665554322111 1222222221000 0033333
Q ss_pred --------ccccchhhHHHHH--HHhhhCCCC-cccchhhhhHhhhhccccchhHHHH
Q 022114 226 --------SEKIGYWRYITIY--RHLKANPEF-QCYPIFKYFENWCQDENRHGDFFSA 272 (302)
Q Consensus 226 --------SEKIGYwRYItIy--RHLe~~Pe~-rf~PIFk~Fe~WCqDEnRHGdfFa~ 272 (302)
.+-..|-||++== .-|---|-+ ...| |.|++.|.-+. +-|||..
T Consensus 264 ~~~~Gl~~~~~~~Yi~y~an~~L~~LG~~~~y~~~nP-~~wm~~~~~~~--k~nFFe~ 318 (345)
T 1jk0_B 264 VEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNP-FEFMEDVATAG--KTTFFEK 318 (345)
T ss_dssp -----------CTHHHHHHHHHHHHTTCCCCC--------------------------
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-HHHHHHhcccc--cCccccC
Confidence 2334577888733 344322322 1456 48999996543 3499963
No 18
>1jk0_A RNR Y2, ribonucleoside-diphosphate reductase small chain 1; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1smq_A
Probab=92.19 E-value=0.54 Score=44.94 Aligned_cols=112 Identities=19% Similarity=0.170 Sum_probs=55.2
Q ss_pred cc-chhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccchh---hhhhhhh-
Q 022114 151 FS-GFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKF---IFYATYL- 225 (302)
Q Consensus 151 FS-GflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~Pkf---IfYAtYL- 225 (302)
|| ||...--+++|. .-|-++++..+.+|||++|..|.-..++...= -+++.+-+..++--. +=|+.|+
T Consensus 263 fsg~Fa~~~~l~~rg--~MpG~~~~i~lI~RDE~lH~~f~~~l~~~l~~-----~~~~e~v~el~~eave~E~~~~~~~l 335 (419)
T 1jk0_A 263 FSGSFASIFWLKKRG--MMPGLTFSNELICRDEGLHTDFACLLFAHLKN-----KPDPAIVEKIVTEAVEIEQRYFLDAL 335 (419)
T ss_dssp THHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS-----CCCHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcC--CCccHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45 455344677765 77999999999999999999887666654211 112222222221000 0044454
Q ss_pred -ccc--------cchhhHHHH--HHHhhhCCCC-cccchhhhhHhhhhccccchhHHHH
Q 022114 226 -SEK--------IGYWRYITI--YRHLKANPEF-QCYPIFKYFENWCQDENRHGDFFSA 272 (302)
Q Consensus 226 -SEK--------IGYwRYItI--yRHLe~~Pe~-rf~PIFk~Fe~WCqDEnRHGdfFa~ 272 (302)
-+- ..|-+|++= .+-|---|-+ ...| |.|++.|.-. .+-|||..
T Consensus 336 p~~liGln~~~~~~YI~Y~Anr~L~~LG~~~~y~~~NP-~~wm~~is~~--~ktnFFE~ 391 (419)
T 1jk0_A 336 PVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENP-FDFMENISLA--GKTNFFEK 391 (419)
T ss_dssp CGGGGTCCHHHHHHHHHHHHHHHHHTTTCCCSSCCCCC-CGGGGC--------------
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCC-hHHHHHhccc--cccccCcC
Confidence 233 346677763 2233222222 1455 4899998653 33499853
No 19
>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}
Probab=92.01 E-value=0.078 Score=48.41 Aligned_cols=130 Identities=18% Similarity=0.285 Sum_probs=65.4
Q ss_pred HHHHHHHHhhhhcc----ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccccccccc-cc---c
Q 022114 137 QIFVEFLERSCTAE----FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFL-TK---A 208 (302)
Q Consensus 137 ~~FidFLerScTaE----FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfL-tk---~ 208 (302)
+.|..=|+-++.-| +|||...--+++|. +-|-++++..+.+|||++|..|.-..++..-- +.+-+ ++ .
T Consensus 173 ~~~~~~lva~~~lEgi~FysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~f~~~l~~~l~~--e~~~~~~~e~~~ 248 (346)
T 2rcc_A 173 KTFLESIVYDVILEGLNFYSGFAFFYNLARNQ--KMVSTSTMINYINRDEQLHVYLFTNIFKELLV--EFPELNTEETKT 248 (346)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCGGGCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh--cCChhccHHHHH
Confidence 34444455555555 58888877888876 68999999999999999999886555543221 11111 11 1
Q ss_pred Cccccccch---hhhhhhhhc--cc--------cchhhHHH--HHHHhhhCCC---CcccchhhhhHhhhhccccchhHH
Q 022114 209 RKYTFFKPK---FIFYATYLS--EK--------IGYWRYIT--IYRHLKANPE---FQCYPIFKYFENWCQDENRHGDFF 270 (302)
Q Consensus 209 k~YTfF~Pk---fIfYAtYLS--EK--------IGYwRYIt--IyRHLe~~Pe---~rf~PIFk~Fe~WCqDEnRHGdfF 270 (302)
+-+..++-- =+=|+.|+- +. ..|-||++ ....|---|- ....| |.|+++|.+-..-+-|||
T Consensus 249 ~v~~l~~eav~~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~~L~~lG~~~~f~~~~~nP-~~w~~~~~~~~~~~~nFF 327 (346)
T 2rcc_A 249 FVKTTLMKAADLEKDWFRYIIGDKIPGINPEDMETYISFIANKRAVQLGMEKPYPEIKHNP-MKWIRAYEDVNSGKSDFF 327 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCSTTCCHHHHHHHHHHHHHHHHHHTTCCCSCTTCCSCS-CTTC--------------
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCc-HHHHHHHhccCccccCCC
Confidence 111111100 011344433 33 34788887 3334433333 35677 589999986545588998
Q ss_pred H
Q 022114 271 S 271 (302)
Q Consensus 271 a 271 (302)
.
T Consensus 328 e 328 (346)
T 2rcc_A 328 E 328 (346)
T ss_dssp -
T ss_pred c
Confidence 6
No 20
>2vxx_A Starvation induced DNA binding protein; stress response protein, DPS, oxidation, iron binding, ferroxidase centre; HET: PG4; 2.40A {Synechococcus elongatus}
Probab=91.93 E-value=0.47 Score=39.30 Aligned_cols=149 Identities=9% Similarity=0.003 Sum_probs=111.6
Q ss_pred hcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-hhHHHHhhccccchhhhhhhhhhhhccccccccccc---
Q 022114 129 DKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF--- 204 (302)
Q Consensus 129 d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf--- 204 (302)
..|+++.++..++.|-.-...|+.....|+-....++..+ +.+++.|.-.+-+|..||.-|-+-+.+.|-..+++.
T Consensus 19 ~~l~~~~~~~vi~~LN~~La~e~~a~~~y~~~hw~v~g~~f~~lh~~~~~~~~ee~~had~laErI~~LGg~p~~~~~~~ 98 (192)
T 2vxx_A 19 ILLEKATTTPICEGMNRLLASFQALYLQYQKHHFVVEGAEFYPLHQFFQDCYEQVQDHVHALGERLNGLGGVPVAGFQQL 98 (192)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHH
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHH
Confidence 4578889999999999999999999999999999997664 778999999999999999999999999999888751
Q ss_pred --ccccCcc--ccccchhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHhhCccc
Q 022114 205 --LTKARKY--TFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQF 280 (302)
Q Consensus 205 --Ltk~k~Y--TfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmraqP~l 280 (302)
+++-+.+ .+..++=++=...=.|+.-=..|=.+...-+..-|. ..-++++...++|-.|-+++.+.+...|-.
T Consensus 99 ~~~s~i~e~~~~~~~~~e~l~~~l~~e~~~i~~~~~~i~~a~~~~D~---~T~~lL~~~l~eeEkh~w~L~~~L~~~~l~ 175 (192)
T 2vxx_A 99 AALCCFTPEPEGAFNCRQMLSNDLQAEQAIIGVLRQQATQAESLGDR---ATAYLYDQILLKTEERAYHIGHFLANDSLK 175 (192)
T ss_dssp HHHCSSCCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH---HHHHHHHHHHHHHHHHHHHHHHHHSSCCSC
T ss_pred HHHCcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 1122222 245666677666666654434444444433444444 455566667788999999999999865543
No 21
>1syy_A Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune EVAS replication, oxidoreductase; 1.70A {Chlamydia trachomatis} SCOP: a.25.1.2 PDB: 4d8g_A 4d8f_A 2ani_A
Probab=91.75 E-value=0.13 Score=46.96 Aligned_cols=131 Identities=21% Similarity=0.262 Sum_probs=62.6
Q ss_pred HHHHHHHHHhh-hhcc----ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhccccccccccccc----
Q 022114 136 RQIFVEFLERS-CTAE----FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLT---- 206 (302)
Q Consensus 136 r~~FidFLerS-cTaE----FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLt---- 206 (302)
++.|..=|+-+ +.-| +|||...--+++|. +-|-++++.++.+|||++|..|.-..++..-- +..-+-
T Consensus 178 ~~~~~~~lva~~~~lEGi~FysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~f~~~l~~~~~~--e~p~~~~~e~ 253 (346)
T 1syy_A 178 LQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQN--KMIGIGEQYQYILRDETIHLNFGIDLINGIKE--ENPEIWTPEL 253 (346)
T ss_dssp HHHHHHHHHHHHTTTTTTHHHHHHHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCGGGCCHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCChhhhHHH
Confidence 44555555554 4445 47888777888876 78999999999999999999886554443211 111111
Q ss_pred ccCccccccchh---hhhhhh-hccc-c--------chhhHHHHHH--HhhhCCCCcccchhhhhHhhhhccccchhHHH
Q 022114 207 KARKYTFFKPKF---IFYATY-LSEK-I--------GYWRYITIYR--HLKANPEFQCYPIFKYFENWCQDENRHGDFFS 271 (302)
Q Consensus 207 k~k~YTfF~Pkf---IfYAtY-LSEK-I--------GYwRYItIyR--HLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa 271 (302)
+.+-+..++--. +=|+.| |.+. + .|-||++==| .|---|-+.--..|.|+++|-+=+..| |||.
T Consensus 254 ~~~v~~l~~eav~~E~~~~~~~l~~~~~Gln~~~~~~yi~y~an~rL~~lG~~~~y~~~np~pw~~~~~~~~~~~-nFFe 332 (346)
T 1syy_A 254 QQEIVELIKRAVDLEIEYAQDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIYHTKNPFPWMSETIDLNKEK-NFFE 332 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSSCBTTBCHHHHHHHHHHHHHHHHHHTTCCCSSCCCCSCTTC---------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCchHHHHHhCcCCCC-CCCc
Confidence 111122211000 003334 3222 3 4678887433 443333222222358898887666556 9986
No 22
>2e0z_A Virus-like particle; bacteriophage, HK97; 3.60A {Pyrococcus furiosus}
Probab=91.59 E-value=0.034 Score=52.18 Aligned_cols=56 Identities=25% Similarity=0.336 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhc
Q 022114 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLS 194 (302)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~ 194 (302)
.+.++-|.-+..+|..|.=.|.++.... +||.++++|..++.||-+|+|-+=.-+.
T Consensus 18 ~el~~air~ai~~E~eAi~~Y~q~A~~~--~d~~~K~vl~~ia~EEk~H~~~f~~ll~ 73 (345)
T 2e0z_A 18 EELMEILRLAIIAELDAINLYEQMARYS--EDENVRKILLDVAREEKAHVGEFMALLL 73 (345)
T ss_dssp ----------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567788889999999999999999988 8999999999999999999994333333
No 23
>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} SCOP: a.25.1.1
Probab=91.49 E-value=0.53 Score=36.83 Aligned_cols=133 Identities=20% Similarity=0.143 Sum_probs=96.7
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccc
Q 022114 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKP 216 (302)
Q Consensus 138 ~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~P 216 (302)
..++.|-+-...|+.....|.-.+..+++. .+.+++.|.-.+-+|..||--|-+-+.+.|-...++-+.+-+. .-.+
T Consensus 6 ~~~~~Ln~~la~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Had~l~eri~~lGg~p~~~~~~~~~~--~~~~ 83 (161)
T 3gvy_A 6 KVIEYLNAALRSELTAVSQYWLHYRLQEDWGFGSIAHKSRKESIEEMHHADKLIQRIIFLGGHPNLQRLNPLRI--GQTL 83 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC--CSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCccCCCCCCCC--CCCH
Confidence 478889999999999999999999988765 5899999999999999999999999999887766644432221 1123
Q ss_pred hhhhhhhhhccccchhhHHHHHHHhhhCC-CCcccchhhhhHhhhhccccchhHHHHHHhh
Q 022114 217 KFIFYATYLSEKIGYWRYITIYRHLKANP-EFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (302)
Q Consensus 217 kfIfYAtYLSEKIGYwRYItIyRHLe~~P-e~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (302)
.=++=+.+=.|+ .-|..||.+-+.- +..-+.+-++|+....||-.|-++|...++.
T Consensus 84 ~e~l~~~l~~E~----~~~~~~~~~~~~A~~~~D~~t~~~l~~~~~eEe~h~~~l~~~l~~ 140 (161)
T 3gvy_A 84 RETLDADLAAEH----DARTLYIEARDHCEKVRDYPSKMLFEELIADEEGHIDYLETQIDL 140 (161)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHTTTTCHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333343443 3556666544322 2445667778888889999999999887754
No 24
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=91.34 E-value=0.12 Score=41.40 Aligned_cols=55 Identities=22% Similarity=0.233 Sum_probs=48.5
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcc
Q 022114 139 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSD 195 (302)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~D 195 (302)
..+-|.-....|-....+|+++.+++ .+|.++++|..++.||..|...|-+.+.+
T Consensus 101 ~~~~l~~ai~~E~~a~~~Y~~~a~~~--~d~~~k~l~~~la~eE~~H~~~l~~~~~~ 155 (157)
T 1vjx_A 101 LKEVLDIAISVEKDSIILYYELKDGL--VNSDAQKTVKKIIDQEKEHLRKLLEMKRE 155 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC--CSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 56667778889999999999999998 78999999999999999999988776543
No 25
>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308}
Probab=90.82 E-value=0.49 Score=38.76 Aligned_cols=136 Identities=18% Similarity=0.061 Sum_probs=97.7
Q ss_pred HHHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccc
Q 022114 136 RQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFF 214 (302)
Q Consensus 136 r~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF 214 (302)
.+..++.|-+-...|+.....|.-++..+++. .+.+++.|.-.+-+|..||--|-+-+.+.|-...++-+.+-+ .. -
T Consensus 25 ~~~~~~~LN~~la~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~eE~~Had~laeri~~lGg~p~~~~~~~~~-~~-~ 102 (182)
T 3fvb_A 25 EPKVIERLNEALFLELGAVNQYWLHYRLLNDWGYTRLAKKEREESIEEMHHADKLIDRIIFLEGFPNLQTVSPLR-IG-Q 102 (182)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBCCCCC-CC-S
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcCCCCCCCC-CC-C
Confidence 45688999999999999999999999999765 588999999999999999999999999988776664443321 11 2
Q ss_pred cchhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHhh
Q 022114 215 KPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (302)
Q Consensus 215 ~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (302)
.+.=++=+.+=.|+-.-..|-.+...-++.. -+.+-++|+....||-.|-++|..+++.
T Consensus 103 ~~~e~l~~~l~~E~~~~~~y~~~i~~A~~~~---D~~t~~~L~~il~eEe~h~~~l~~~l~~ 161 (182)
T 3fvb_A 103 NVKEVLEADLKGEYDARASYKESREICDKLG---DYVSKQLFDELLADEEGHIDFLETQLDL 161 (182)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444433333333333333343 4556777888889999999999887754
No 26
>4etr_A Putative uncharacterized protein; DUF2383, domain of unknown function, cytoplasmic, unknown FU; 2.25A {Pseudomonas aeruginosa}
Probab=90.80 E-value=0.17 Score=41.03 Aligned_cols=72 Identities=15% Similarity=0.070 Sum_probs=60.6
Q ss_pred hcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhccccccccc
Q 022114 129 DKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDL 202 (302)
Q Consensus 129 d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDL 202 (302)
+||.-+..+..++=|-.-+..+..|..-|+....++ .+|.|+.+|.-|+-+..+|+.=|..-+...|-..+-
T Consensus 2 ~~~~~~~~~~~i~~Ln~Li~~~~D~~~gY~~aae~~--~d~~lk~~f~~~a~~~~~~~~eL~~~i~~lGg~p~~ 73 (153)
T 4etr_A 2 SHMNQTNLDDTLDVLNDLLQTSKDGEAGFHACAEDL--RDPQLKAAMLEQSRDCAAAADELERIVLELGGKPKD 73 (153)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC--
T ss_pred cchhHhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 467777778899999999999999999999999999 899999999999999999999999999999976653
No 27
>3pvt_A Phenylacetic acid degradation protein PAAA; protein-protein complex, ferritin-like fold, bacterial multi monooxygenase, structural genomics; HET: 3HC; 2.03A {Escherichia coli} PDB: 3pvr_A* 3pvy_A* 3pw1_A* 3pw8_C* 3pwq_C
Probab=90.55 E-value=0.16 Score=47.07 Aligned_cols=153 Identities=17% Similarity=0.203 Sum_probs=102.7
Q ss_pred hhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhh--ccccchhhhhhhhhhhhcccccccc-cc-
Q 022114 128 ADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFS--LMSRDEARHAGFLNKGLSDFNYALD-LG- 203 (302)
Q Consensus 128 ~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~--lMaRDEARHAGFlNkal~Df~l~lD-Lg- 203 (302)
-|.||++-|+..+++|.+-.-+|..|+.-..|...+- |.|.+-.. -|+-||.+|+-.|...+.++|++-| |-
T Consensus 22 ~d~mP~~Yr~~L~~ll~~laD~ELi~~~rl~ew~~~A----P~Lee~iALa~ia~DE~GHa~~l~~~a~~lG~d~d~l~~ 97 (311)
T 3pvt_A 22 QDWMPDAYRKTLIRQIGQHAHSEIVGMLPEGNWITRA----PTLRRKAILLAKVQDEAGHGLYLYSAAETLGCAREDIYQ 97 (311)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHHHHTHHHHHTTGGGC----SSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 3679999999999999999999999999999888877 98887655 4678999999999999999987532 11
Q ss_pred cccccCcccc---c-cc--hhh--hhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHh
Q 022114 204 FLTKARKYTF---F-KP--KFI--FYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMK 275 (302)
Q Consensus 204 fLtk~k~YTf---F-~P--kfI--fYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmr 275 (302)
++-.. .+.| | .| .|. +--.||-+-.+.-. |+-|. +..+-|+=.=...=|-+|-.|-++-...++
T Consensus 98 ~~r~~-~~~~~~lfe~P~~dWad~vvr~~l~D~~a~~~----~~~L~---~ss~~plA~~a~ki~kEE~yH~~~g~~wv~ 169 (311)
T 3pvt_A 98 KMLDG-RMKYSSIFNYPTLSWADIGVIGWLVDGAAIVN----QVALC---RTSYGPYARAMVKICKEESFHQRQGFEACM 169 (311)
T ss_dssp HHHTT-SSCCCGGGGSCCCSHHHHHHHHHHHHHHHHHH----HHTTT---TCSBHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcc-hhhhhhHHhCCCCCHHHHHHHHHHHHHHHHHH----HHHHH---cCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22221 2221 2 23 221 12345555443333 23333 445667777788889899888777544433
Q ss_pred ----hCc---cchhhhhhHHHHHH
Q 022114 276 ----AQP---QFLNDWKAKLWARF 292 (302)
Q Consensus 276 ----aqP---~ll~g~~~kLW~RF 292 (302)
..| +.+..-.+++|...
T Consensus 170 rL~~gt~esr~r~Q~Al~~~wp~~ 193 (311)
T 3pvt_A 170 ALAQGSEAQKQMLQDAINRFWWPA 193 (311)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHH
Confidence 233 34555567888765
No 28
>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1
Probab=90.38 E-value=0.61 Score=36.92 Aligned_cols=126 Identities=15% Similarity=0.158 Sum_probs=95.8
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcc--cccccccccccccCcccccc
Q 022114 139 FVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSD--FNYALDLGFLTKARKYTFFK 215 (302)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~D--f~l~lDLgfLtk~k~YTfF~ 215 (302)
.++.|......|+...-.|--+++..++. -|.+++.|.--|.+|..||.-+=+-+.+ .|. + +-.+.+=.
T Consensus 9 ~~~~Ln~a~~~E~~A~~~Y~~~A~~a~~~g~~~~a~~f~~~A~eE~~HA~~~~~~l~~~~lg~----p----~~~~p~~~ 80 (144)
T 1j30_A 9 TAENLKQGFIGESMANRRYLYFAKRADEEGYPEIAGLLRSIAEGETAHAFGHLDFIRQGGLTD----P----ATDKPIGT 80 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBC----T----TTSCBCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC----C----CcCCCCcc
Confidence 88999999999999999999999988655 5999999999999999999988777776 543 1 11122223
Q ss_pred chhhhhhhhhccccch-hhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHh
Q 022114 216 PKFIFYATYLSEKIGY-WRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMK 275 (302)
Q Consensus 216 PkfIfYAtYLSEKIGY-wRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmr 275 (302)
++=++=..+=.|+--+ -+|-.+...-+.. ..+.+.++|+.=..||-.|.+.|..++.
T Consensus 81 ~~e~L~~al~~E~~~~~~~y~~~~~~A~~e---gd~~~~~~f~~i~~~E~~H~~~~~~~l~ 138 (144)
T 1j30_A 81 LEQMIESAIAGETYEWTQMYPGFAKVAREE---GFPEVAEWFETLARAEKSHAEKFQNVLK 138 (144)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHc---CcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666666677665 6666666665554 4556778888889999999999998875
No 29
>2o1z_A Ribonucleotide reductase subunit R2; small subunit ribonucleotide reductase, oxidoreductase, DNA replication, iron, DIIRON, radical, R2 subunit; 2.40A {Plasmodium vivax}
Probab=90.20 E-value=0.1 Score=47.43 Aligned_cols=44 Identities=20% Similarity=0.041 Sum_probs=36.4
Q ss_pred ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhccc
Q 022114 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDF 196 (302)
Q Consensus 151 FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df 196 (302)
+|||...--+++|. .-|-++++..+.+|||++|..|.-..++..
T Consensus 196 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~f~~~l~~~l 239 (311)
T 2o1z_A 196 SGSFCAIFWFKKQN--KLHGLTFSNELISRDEGLHTDFNCLIYSLL 239 (311)
T ss_dssp HHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcC--CcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48887777788875 789999999999999999998877666543
No 30
>3ee4_A Probable ribonucleoside-diphosphate reductase; manganese, iron, DIIRON, carboxylate, oxidase, ligand, C monooxygenase; HET: MYR; 1.90A {Mycobacterium tuberculosis} PDB: 4ac8_A*
Probab=89.45 E-value=0.12 Score=47.37 Aligned_cols=42 Identities=21% Similarity=0.250 Sum_probs=32.3
Q ss_pred ccch-hhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhc
Q 022114 151 FSGF-LLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLS 194 (302)
Q Consensus 151 FSGf-lLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~ 194 (302)
+||| ..+.-+++|. +-|-++++.++.+|||++|..|.-..++
T Consensus 181 ysgF~~~~~~l~~rg--~m~G~~~~i~lI~RDE~~H~~f~~~l~~ 223 (323)
T 3ee4_A 181 LTGYYAWHKICVERA--ILPGMQELVRRIGDDERRHMAWGTFTCR 223 (323)
T ss_dssp HHHHHHHHHHHTTTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC--CCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677 3444577764 6799999999999999999988655444
No 31
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=89.36 E-value=0.24 Score=39.82 Aligned_cols=54 Identities=24% Similarity=0.263 Sum_probs=47.7
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhc
Q 022114 139 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLS 194 (302)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~ 194 (302)
..+=|.-..-.|-.|.-.|+++..+. .+|.++++|.-+++||.+|...|-+-+.
T Consensus 94 ~~~~l~~A~~~E~~a~~fY~~~a~~~--~d~~~k~~~~~la~eE~~H~~~l~~~~~ 147 (167)
T 2oh3_A 94 PYHALRYARDNEIRGMEYYKEAAANS--ADPEVKRLGADFAAEEAEHVVALDKWIE 147 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777889999999999999988 7899999999999999999999877654
No 32
>1h0o_A Ribonucleoside-diphosphate reductase; oxidoreductase, ribonucleotide reductase, dinuclear metal-cluster; 2.2A {Mus musculus} SCOP: a.25.1.2 PDB: 1h0n_A 1w68_A 1w69_A 1xsm_A 2uw2_A 3hf1_A 2vux_A
Probab=89.26 E-value=0.49 Score=44.62 Aligned_cols=43 Identities=26% Similarity=0.168 Sum_probs=36.5
Q ss_pred ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcc
Q 022114 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSD 195 (302)
Q Consensus 151 FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~D 195 (302)
+|||...--+++|. .-|-++++..+.+|||++|..|.-..++.
T Consensus 238 ys~F~~~~~l~~rg--~MpG~~~~i~lI~RDE~lH~~f~~~l~~~ 280 (390)
T 1h0o_A 238 SGSFASIFWLKKRG--LMPGLTFSNELISRDEGLHCDFACLMFKH 280 (390)
T ss_dssp HHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcC--CCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68888777888875 78999999999999999999887666654
No 33
>3pf7_A Benzoyl-COA oxygenase component B; DIIRON center, epoxidase, benzoyl coenzyme A, oxidoreductase; 1.90A {Azoarcus evansii} PDB: 3per_A 3pm5_A* 3q1g_A
Probab=89.17 E-value=0.15 Score=50.40 Aligned_cols=155 Identities=15% Similarity=0.252 Sum_probs=108.1
Q ss_pred HhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccc--cchhhhhh-hhhhhhccccccc---
Q 022114 127 AADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMS--RDEARHAG-FLNKGLSDFNYAL--- 200 (302)
Q Consensus 127 ~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMa--RDEARHAG-FlNkal~Df~l~l--- 200 (302)
.|++||++-|+..+.-++..+-+|..|..-+.++..+- |.|.+.-.+|+ -||+||+- .+--+..+||..-
T Consensus 97 ~WqemP~eYR~~LiRlI~~haDSEiagve~e~~wi~~A----PSL~~k~~L~aiVqDE~gHg~~mlyllae~fG~Dr~e~ 172 (481)
T 3pf7_A 97 VWQEVPGEYRSTLRRIIVTQGDTEPASVEQQRHLGLTA----PSLYDLRNLFQVNVEEGRHLWAMVYLLHAHFGRDGREE 172 (481)
T ss_dssp CBSSCCGGGHHHHHHHHHHHHHHHHHHHHHHTTGGGGC----SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred chhhCCHHHHHHHHHHHHHHhhhHHhhchhhhhHHhcC----CCHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHH
Confidence 68899999999999999999999999999999888776 99888666665 49999996 5666669999873
Q ss_pred -cccc---ccccCc----ccccc--chh--hhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccc--
Q 022114 201 -DLGF---LTKARK----YTFFK--PKF--IFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRH-- 266 (302)
Q Consensus 201 -DLgf---Ltk~k~----YTfF~--Pkf--IfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRH-- 266 (302)
|... .-+.++ +-|=- |.| ++-.+||-+.-|.- +|..--+-.|-|+=+=+..=|-+|..|
T Consensus 173 ad~LL~R~sGd~~~pk~L~~FNyPt~~WaD~~~f~~LvDrAgi~-------qL~~L~~sSY~PlARamr~I~kEEafH~~ 245 (481)
T 3pf7_A 173 GEALLERRSGDEDNPRILTAFNEKTPDWLSFFMFTFITDRDGKF-------QLASLAESAFDPLARTCKFMLTEEAHHLF 245 (481)
T ss_dssp HHHHHHCCTTCSSSCCSSGGGSSCCCSHHHHHHHHHHTHHHHHH-------HHHHHTTCSBHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccCCcccccccccccCCCCCHHHHHHHHHhhhHHHHH-------HHHHHHhCCcHHHHHHHHHHhhHHHHHHH
Confidence 3221 112111 12222 222 23567787776643 344444678999999999999999765
Q ss_pred -hhH-HHHHHh-----------hCc-----------cchhhhhhHHHHHH
Q 022114 267 -GDF-FSALMK-----------AQP-----------QFLNDWKAKLWARF 292 (302)
Q Consensus 267 -Gdf-Fa~lmr-----------aqP-----------~ll~g~~~kLW~RF 292 (302)
|+- ...|++ .+| ++++.-.|+.|.+-
T Consensus 246 ~Ge~gl~rli~~t~e~~~~~gt~d~~~~r~~g~i~l~~~Q~alNrWwp~~ 295 (481)
T 3pf7_A 246 VGESGIARVIQRTCEVMKELGTDDPAKLRAAGVIDLPTLQKYLNFHYSVT 295 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCHHHHHHTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhccCcchhhhhhhcccccHHHHHHHHHHHhHHH
Confidence 552 222322 233 36677778888874
No 34
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=88.35 E-value=0.35 Score=40.82 Aligned_cols=117 Identities=16% Similarity=0.137 Sum_probs=75.4
Q ss_pred HHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccchh
Q 022114 140 VEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKF 218 (302)
Q Consensus 140 idFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~Pkf 218 (302)
++.|...-..|...---|-=.++.-++. .|.|+++|.-.|.+|..||.-+=+.|.+.| -....|...
T Consensus 8 ~~nL~~afagEs~A~~~Y~~~A~~A~~eG~~~iA~~F~~~A~~E~~HA~~~~~~L~~i~--~t~enL~~a---------- 75 (170)
T 3pwf_A 8 KKFLEEAFAGESMAHMRYLIFAEKAEQEGFPNIAKLFRAIAYAEFVHAKNHFIALGKLG--KTPENLQMG---------- 75 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCC--CHHHHHHHH----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH----------
Confidence 5667777788888876666666655544 899999999999999999985555665422 111222111
Q ss_pred hhhhhhhccccchhhHHHHHHH-hhhCCCCcccchhhhhHhhhhccccchhHHHHHHhh
Q 022114 219 IFYATYLSEKIGYWRYITIYRH-LKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (302)
Q Consensus 219 IfYAtYLSEKIGYwRYItIyRH-Le~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (302)
.-.|.. -+..+|.. .+.--+-.+.-|-++|+.=..||-+|+|.|..++..
T Consensus 76 -----~~gE~~---e~~~mY~~~a~~A~eeg~~~~a~~f~~i~~~E~~H~~~~~~~l~~ 126 (170)
T 3pwf_A 76 -----IEGETF---EVEEMYPVYNKAAEFQGEKEAVRTTHYALEAEKIHAELYRKAKEK 126 (170)
T ss_dssp -----HHHHHH---HHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----HHhHHH---HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 01222311 122234456778889999999999999999988764
No 35
>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}
Probab=88.29 E-value=0.23 Score=39.85 Aligned_cols=66 Identities=15% Similarity=0.168 Sum_probs=55.4
Q ss_pred HhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhccc
Q 022114 127 AADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDF 196 (302)
Q Consensus 127 ~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df 196 (302)
..+.|++++|..= -..+|..+|..-.-+|.....-. +||.+++++.-.+.+|-+|+|-+=..|...
T Consensus 9 p~e~Ls~e~~d~~--Rai~sl~~EleAI~~Y~q~a~~~--~d~~~k~vl~~i~~EEkeH~g~~lelLrr~ 74 (95)
T 3k6c_A 9 PTQELSDETRDMH--RAIISLREELEAVDLYNQRVNAC--KDKELKAILAHNRDEEKEHAAMLLEWIRRC 74 (95)
T ss_dssp CGGGSCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHhcCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3478888887643 24569999999999999999987 899999999999999999999887776643
No 36
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=88.20 E-value=0.87 Score=39.23 Aligned_cols=131 Identities=13% Similarity=0.117 Sum_probs=85.1
Q ss_pred HHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccchh
Q 022114 140 VEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKF 218 (302)
Q Consensus 140 idFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~Pkf 218 (302)
++-|......|....-.|...++..++. .+.++.+|...|.+|..||.-+-+.|.+.|-.+.+ -+.....+. ...=
T Consensus 30 ~~nL~~a~~gE~~a~~~Y~~~A~~A~~eG~~~iA~~F~~~A~~E~~HA~~~~~~l~~l~~~~~i-~~~p~~~~g--st~e 106 (202)
T 1yuz_A 30 LENLKAAIAGETGAHAKYTAFAKAAREQGYEQIARLFEATAAAELIHIGLEYALVAEMEPGYEK-PTVAAPSAY--SCDL 106 (202)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCC-CCC--CCCC--CHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcee-ccCCccCCC--CHHH
Confidence 4667777788888888888888877665 79999999999999999999999999876554433 111000000 1111
Q ss_pred hhhhhhhccccchhhHHHHHHHhhhC-CCCcccchhhhhHhhhhccccchhHHHHHHhh
Q 022114 219 IFYATYLSEKIGYWRYITIYRHLKAN-PEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (302)
Q Consensus 219 IfYAtYLSEKIGYwRYItIyRHLe~~-Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (302)
.+=+.+=-|. --+...|..+-+- -+-.++.+.++|+.=..+|-+|.+-|..++..
T Consensus 107 nL~~a~~gE~---~E~t~my~~~a~~A~eEgd~~~a~~f~~i~~~E~~H~~~~~~ll~~ 162 (202)
T 1yuz_A 107 NLISGANGEI---YETSDMYPAFIRKAQEEGNSKAVHVFTRAKLAESVHAERYLAAYND 162 (202)
T ss_dssp HHHHHHHHHH---HHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhHH---HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1211111220 1222223322111 13457789999999999999999999998864
No 37
>2p1i_A Ribonucleotide reductase, small chain; F222 twinning, plasmodb PY03671, S genomics consortium, SGC, oxidoreductase; 2.70A {Plasmodium yoelii yoelii}
Probab=88.13 E-value=0.17 Score=46.61 Aligned_cols=111 Identities=17% Similarity=0.137 Sum_probs=55.1
Q ss_pred ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccc------chhhhhhh-
Q 022114 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK------PKFIFYAT- 223 (302)
Q Consensus 151 FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~------PkfIfYAt- 223 (302)
+|||...--+++|. .-|-++++..+.+|||++|..|.-..++..--.. ++.+-+..++ -+|+-++.
T Consensus 197 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~f~~~l~~~l~~~~-----~~~~v~~l~~eave~E~~~~~~~l~ 269 (349)
T 2p1i_A 197 SGSFCAIFWFKKQN--KLHGLTFSNELISRDEGLHTDFNCLIYSLLENKL-----PENVVQNIVKEAVEVERSFICESLP 269 (349)
T ss_dssp HHHHHHHHHHHTTT--CSTTHHHHHHHHHHHHHHHHHHHHHHHHTCSSCC-----CHHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHhcC--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-----CHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 47887777788875 7899999999999999999988766665433211 1222222221 12221110
Q ss_pred ----hh--ccccchhhHHHHHH--HhhhCCCC-cccchhhhhHhhhhccccchhHHH
Q 022114 224 ----YL--SEKIGYWRYITIYR--HLKANPEF-QCYPIFKYFENWCQDENRHGDFFS 271 (302)
Q Consensus 224 ----YL--SEKIGYwRYItIyR--HLe~~Pe~-rf~PIFk~Fe~WCqDEnRHGdfFa 271 (302)
=| .+-..|-||++==| -|---|-+ .-.|+ .|++.|.-.. +-|||.
T Consensus 270 ~~~~Gl~~~~~~~Yi~y~an~~L~~LG~~~~y~~~nP~-~wm~~~~~~~--k~nFFe 323 (349)
T 2p1i_A 270 CDLIGMNSRLMSQYIEFVADRLLECLGCSKVFHSKNPF-NWMDLISLQG--KTNFFE 323 (349)
T ss_dssp STTTTCCHHHHHHHHHHHHHHHHHHTTCCCSSCCCCSC-CC----------------
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCh-HHHHHhcccc--cCCccc
Confidence 01 23345778877333 33222221 24564 8999996432 248985
No 38
>3mjo_A Ribonucleotide reductase subunit R2F; Mn ribonucleotide reductase, RNR, radical enzyme, split SIGN metallocofactor; 1.36A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1uzr_A*
Probab=87.61 E-value=0.21 Score=45.01 Aligned_cols=38 Identities=34% Similarity=0.509 Sum_probs=32.3
Q ss_pred ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhh
Q 022114 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLN 190 (302)
Q Consensus 151 FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlN 190 (302)
+|||...--+++|. .-|-++++.++.+|||+.|..|.-
T Consensus 172 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~lH~~f~~ 209 (296)
T 3mjo_A 172 YSGFYLPMYLSSRA--KLTNTADIIRLIIRDESVHGYYIG 209 (296)
T ss_dssp HHHTHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CcchHHHHHHHHHHHHHHHHHHHH
Confidence 38888777888875 789999999999999999987743
No 39
>1za0_A Possible acyl-[acyl-carrier protein] desaturase D (acyl-[ACP] desaturase) (stearoyl-ACP...; four-helix bundle, metal binding protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.2
Probab=87.30 E-value=0.23 Score=45.52 Aligned_cols=45 Identities=24% Similarity=0.501 Sum_probs=36.0
Q ss_pred hccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhc
Q 022114 148 TAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLS 194 (302)
Q Consensus 148 TaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~ 194 (302)
.-|-.=.+.|..+++.. ..|.|++|.+..|+||+||.+|--+-++
T Consensus 157 fqE~aT~v~y~n~a~~~--~dPvL~~i~~~IA~DE~RH~~~y~~~v~ 201 (275)
T 1za0_A 157 FYERCGAVFCRNLAAQI--EEPILAGLIDRIARDEVRHEEFFANLVT 201 (275)
T ss_dssp HHHHHHHHHHHHHHHHC--CSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555578899999765 7999999999999999999998544443
No 40
>1krq_A Ferritin; H-chain like four-helix bundle, binding protein; 2.70A {Campylobacter jejuni} SCOP: a.25.1.1
Probab=87.25 E-value=1.8 Score=35.06 Aligned_cols=135 Identities=15% Similarity=0.218 Sum_probs=107.3
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccc
Q 022114 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKP 216 (302)
Q Consensus 138 ~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~P 216 (302)
..++-|-+-...|+...-.|--+++-.++. -|-+++.|.-.|-+|-.||--+=+-+.+.|-.++++-+.+- .-.|=.+
T Consensus 5 ~~~~~Ln~~i~~El~A~~~Yl~~a~~~~~~gl~~~a~~f~~~a~eE~~HA~~l~~~i~~~gG~~~l~~i~~p-~~~~~~~ 83 (167)
T 1krq_A 5 EVVKLLNEQINKEMYAANLYLSMSSWCYENSLDGAGAFLFAHASEESDHAKKLITYLNETDSHVELQEVKQP-EQNFKSL 83 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCCCCC-CCCCSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCC-CCCcCCH
Confidence 467888889999999999999888877655 59999999999999999999998999999999988877654 2333456
Q ss_pred hhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHhh
Q 022114 217 KFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (302)
Q Consensus 217 kfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (302)
.=++=+..=-||.---.|-.++..-+.+-++ .+.++|+.--.||-.|.+-+.-++..
T Consensus 84 ~e~l~~al~~E~~~~~~~~~l~~~a~~~~D~---~~~~~l~~~l~Eq~e~~~~l~~~l~~ 140 (167)
T 1krq_A 84 LDVFEKTYEHEQFITKSINTLVEHMLTHKDY---STFNFLQWYVSEQHEEEALFRGIVDK 140 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH---HHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCh---hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777788888999999999999988877544 45556664456677798888877643
No 41
>3dhz_A Ribonucleotide reductase subunit R2F; metal free, hydrogen bond, metal binding protein; 1.63A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1kgo_A 1kgp_A 1oqu_A 1kgn_A
Probab=86.84 E-value=0.24 Score=45.28 Aligned_cols=109 Identities=25% Similarity=0.393 Sum_probs=56.5
Q ss_pred ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccchhhh----------
Q 022114 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIF---------- 220 (302)
Q Consensus 151 FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~PkfIf---------- 220 (302)
+|||...--+++|. +-|-++++.++.+|||+.|..|.-.-.... +.-++....=. + -.+|+
T Consensus 173 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~lH~~f~~~l~~~~-----~~~~~~~~~~e-~-~~~~~~l~~eave~E 243 (329)
T 3dhz_A 173 YSGFYLPMYLSSRA--KLTNTADIIRLIIRDESVHGYYIGYKYQQG-----VKKLSEAEQEE-Y-KAYTFDLMYDLYENE 243 (329)
T ss_dssp HHHHHHHHHHHTTT--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HTTSCHHHHHH-H-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CCccHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHhhhHHhHHH-H-HHHHHHHHHHHHHHH
Confidence 38888877888875 779999999999999999987743222111 00011100000 0 01233
Q ss_pred --hhhhhccccc-------hhhHHHHHH--HhhhCCCCc-----ccchhhhhHhhhhcc-ccchhHHH
Q 022114 221 --YATYLSEKIG-------YWRYITIYR--HLKANPEFQ-----CYPIFKYFENWCQDE-NRHGDFFS 271 (302)
Q Consensus 221 --YAtYLSEKIG-------YwRYItIyR--HLe~~Pe~r-----f~PIFk~Fe~WCqDE-nRHGdfFa 271 (302)
|+.|+-+.|| |=||++==| .|---|-+. ..|+. ..|-+.+ ..|-|||.
T Consensus 244 ~~~~~~~~~~iGl~~~~~~yi~y~An~~L~~lG~~~~y~~~~~~~nP~~---~~~~~~~~~~~~nFFe 308 (329)
T 3dhz_A 244 IEYTEDIYDDLGWTEDVKRFLRYNANKALNNLGYEGLFPTDETKVSPAI---LSSLSPNADENHDFFS 308 (329)
T ss_dssp HHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHTTCCCSSCGGGCCCCHHH---HHHHC-----------
T ss_pred HHHHHHHHhccCchHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCccc---HHHhccCccccCCCCC
Confidence 6666667888 888887443 222222221 34543 4477765 57889997
No 42
>3ee4_A Probable ribonucleoside-diphosphate reductase; manganese, iron, DIIRON, carboxylate, oxidase, ligand, C monooxygenase; HET: MYR; 1.90A {Mycobacterium tuberculosis} PDB: 4ac8_A*
Probab=86.78 E-value=1.3 Score=40.42 Aligned_cols=68 Identities=10% Similarity=0.081 Sum_probs=43.5
Q ss_pred HHhhcCChHHHHHHHHHHH-----hhhhccccchhhHHHHhhhhcc-cChhHHHHhhccccchhhhhhhhhhhhccccc
Q 022114 126 EAADKMQGPLRQIFVEFLE-----RSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGFLNKGLSDFNY 198 (302)
Q Consensus 126 ~~~d~l~~~~r~~FidFLe-----rScTaEFSGflLyKEl~rrlk~-~nP~lae~F~lMaRDEARHAGFlNkal~Df~l 198 (302)
++|..|+++.|..+.--|- .|..++.-+ .+...+.. .+|++.-.+...+=+|++|+-.-..-+.-+|.
T Consensus 53 ~dw~~Lt~~Er~~~~~vL~~ft~~D~iv~~nl~-----~~~~~v~~e~~pE~~~~l~~q~~~EaiHs~sYs~il~tl~~ 126 (323)
T 3ee4_A 53 ADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQ-----PFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGI 126 (323)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTH-----HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHhHHHHHHHH-----HHHHHhcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3677888888877643221 112222211 23333321 36999999999999999999988877776654
No 43
>3n37_A Ribonucleoside-diphosphate reductase 2 subunit BE; ribonucleotide reductase, four-helix bundle, dimanganese CLU oxidoreductase; 1.65A {Escherichia coli} PDB: 3n38_A 3n39_B* 3n3a_B* 3n3b_B* 1r2f_A 2bq1_I* 2r2f_A
Probab=86.73 E-value=0.25 Score=44.88 Aligned_cols=109 Identities=23% Similarity=0.336 Sum_probs=57.7
Q ss_pred ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccchhhh----------
Q 022114 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIF---------- 220 (302)
Q Consensus 151 FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~PkfIf---------- 220 (302)
+|||...--+++|. +-|-++++.++.+|||+.|..|.-.-.... +.-++....=. + -.+|+
T Consensus 163 ys~F~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~f~~~l~~~~-----~~~~~~~~~~e-~-~~~i~~l~~eave~E 233 (319)
T 3n37_A 163 YSGFWLPMYFSSRG--KLTNTADLIRLIIRDEAVHGYYIGYKYQKN-----MEKISLGQREE-L-KSFAFDLLLELYDNE 233 (319)
T ss_dssp HHHHHHHHHHHHTT--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HTTSCHHHHHH-H-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CchhHHHHHHHHHHhHHHHHHHHHHHHHHH-----HHhhhHHhHHH-H-HHHHHHHHHHHHHHH
Confidence 38888888888875 789999999999999999987633221111 00011100000 0 02244
Q ss_pred --hhhhhccccc-------hhhHHHHHH--HhhhCCCCc-----ccchhhhhHhhhhcc-ccchhHHH
Q 022114 221 --YATYLSEKIG-------YWRYITIYR--HLKANPEFQ-----CYPIFKYFENWCQDE-NRHGDFFS 271 (302)
Q Consensus 221 --YAtYLSEKIG-------YwRYItIyR--HLe~~Pe~r-----f~PIFk~Fe~WCqDE-nRHGdfFa 271 (302)
|+.|+-+.|| |=||++==| .|---|-+. ..|+ ..+|-+.+ ..|-|||.
T Consensus 234 ~~~~~~~~~~iGl~~~~~~yi~y~An~~L~~lG~~~~f~~~~~~~nP~---~~~~~~~~~~~~~nFFe 298 (319)
T 3n37_A 234 LQYTDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA---ILAALSPNADENHDFFS 298 (319)
T ss_dssp HHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHTTCCCCSCGGGCCCCHH---HHHHHCC----------
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCcc---cHHhhccCccccCCCCC
Confidence 6666667888 888887443 222222222 3454 34477776 67889997
No 44
>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} SCOP: a.25.1.0 PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A
Probab=86.21 E-value=2.4 Score=32.84 Aligned_cols=133 Identities=11% Similarity=-0.002 Sum_probs=94.1
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccc-
Q 022114 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFF- 214 (302)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF- 214 (302)
+..++.|-+-...|+.-...|.-++..+++. -+.+++.|.-.|-+|..||--|=+-+.+.|-...+ -+.+ ....
T Consensus 5 ~~~~~~Ln~~la~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~had~l~eri~~lGg~p~~-~~~~---~~~~~ 80 (154)
T 3r2k_A 5 PEVIDYLNTLLTGELAARDQYFIHSRMYEDWGFSKLYERLNHEMEEETQHADALLRRILLLEGTPRM-RPDD---IHPGT 80 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCC-CCCC---CCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC-CCCC---CCCCC
Confidence 3478889999999999999999999999765 68899999999999999999999988888866555 2221 1121
Q ss_pred cchhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhc-cccchhHHHHHHhh
Q 022114 215 KPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQD-ENRHGDFFSALMKA 276 (302)
Q Consensus 215 ~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqD-EnRHGdfFa~lmra 276 (302)
.+.=++=+.+=.|+-.-..|-.+...-++. .-+.+-++|+....| |-.|-++|...++.
T Consensus 81 ~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~---~D~~t~~~l~~~~~e~ee~h~~~l~~~l~~ 140 (154)
T 3r2k_A 81 TVPEMLEADLKLERHVRAALAKGIALCEQH---KDFVSRDILKAQLADTEEDHAYWLEQQLGL 140 (154)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233334344444444333333333333333 445666778888899 99999999887753
No 45
>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}
Probab=85.79 E-value=1.2 Score=36.43 Aligned_cols=123 Identities=16% Similarity=0.126 Sum_probs=78.8
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccch
Q 022114 139 FVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPK 217 (302)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~Pk 217 (302)
-++.|...-..|...---|-=.++.-++. .|.|+++|.-.|.+|..||.-+=+.|.+.|-. +-| +..=..+
T Consensus 13 t~~nL~~afagEs~A~~~Y~~~A~~A~~eG~~~iA~~F~~~A~~E~~HA~~~~~~L~~~~~p-~~~-------~~~~~T~ 84 (144)
T 4di0_A 13 TEENLKYAFAGESQANRRYLYFASKADVEGQNDIAALFRSTAEGETGHAHGHLEYLEAVGDP-ATG-------LPFGTSR 84 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCT-TTS-------CCCSSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc-ccC-------CCCCcHH
Confidence 56778888889988887777666655443 89999999999999999999766777765411 111 0000001
Q ss_pred hhhhhhhhcccc----chhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHh
Q 022114 218 FIFYATYLSEKI----GYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMK 275 (302)
Q Consensus 218 fIfYAtYLSEKI----GYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmr 275 (302)
=-+-+-.=.|.- .|-.|+.+=|-- -+.-|=++|+.=+.||-+|++-|..+|.
T Consensus 85 enL~~A~~GE~~e~~~~Y~~~a~~A~~e------G~~~ia~~f~~~a~~E~~Ha~~~~~~l~ 140 (144)
T 4di0_A 85 QNLQSAIAGETHEYTDMYPGMAKTARDE------GFEEIANWFETLAKAERSHANRYTKALD 140 (144)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHH------TCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHC------CcHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111111111211 233334333221 3556779999999999999999998876
No 46
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=84.42 E-value=0.59 Score=37.62 Aligned_cols=55 Identities=13% Similarity=0.121 Sum_probs=48.2
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcc
Q 022114 139 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSD 195 (302)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~D 195 (302)
..+-|.-..-.|-...-+|+++.... .+|.++++|.-+++||.+|.-.|-+.+..
T Consensus 106 ~~~~L~~ai~~E~~a~~~Y~~~a~~~--~d~~~r~l~~~ia~eE~~H~~~l~~~l~~ 160 (175)
T 2fzf_A 106 IIDLIRWAMKAEEIAAEFYLKLEEMV--KEEEKKRLMRYLADMERGHYYTLRAEYEL 160 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTS--CSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777888889999999999999988 57999999999999999999988776654
No 47
>4a58_A Ribonucleoside-diphosphate reductase small chain; oxidoreductase, epstein-BARR virus, R2 subunit; 1.68A {Human herpesvirus 4} PDB: 4a5c_A 4a5d_A 4a5e_A 4a5f_A 4a5h_A 4a5i_A 4a5j_A
Probab=83.96 E-value=0.39 Score=43.94 Aligned_cols=39 Identities=26% Similarity=0.170 Sum_probs=32.2
Q ss_pred ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhh
Q 022114 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNK 191 (302)
Q Consensus 151 FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNk 191 (302)
+|||...--+++|. +-|-++++.++.+|||+.|..|.-.
T Consensus 181 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~lH~~f~~~ 219 (324)
T 4a58_A 181 ISSFYSIALLRVRG--LMPGICLANNYISRDELLHTRAASL 219 (324)
T ss_dssp HHHHHHHHHHHHHT--CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CchhHHHHHHHHHHHHHHHHHHHHH
Confidence 47887666788875 7899999999999999999987443
No 48
>1eum_A Ferritin 1; ECFTNA, metal binding protein; 2.05A {Escherichia coli} SCOP: a.25.1.1
Probab=83.90 E-value=3.4 Score=33.30 Aligned_cols=135 Identities=16% Similarity=0.226 Sum_probs=108.3
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccc
Q 022114 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKP 216 (302)
Q Consensus 138 ~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~P 216 (302)
..++-|-+=...|+...-.|--+++-.++. -|-+++.|.-.|-+|-.||--+=+-+.+.|-.++++-+.+-.. .|=.|
T Consensus 5 ~~~~~LN~~i~~El~A~~~Yl~~a~~~~~~gl~~~a~~f~~~a~eE~~HA~~l~~~i~~~gg~~~l~~i~~p~~-~~~~~ 83 (165)
T 1eum_A 5 EMIEKLNEQMNLELYSSLLYQQMSAWCSYHTFEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFA-EYSSL 83 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC-CCSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCC-CCCCH
Confidence 466777777888999988888888776655 5999999999999999999988888999999999988776554 44467
Q ss_pred hhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHhh
Q 022114 217 KFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (302)
Q Consensus 217 kfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (302)
.=++=+..=-||.---.|-.+++.-+++- .+.+.++|+.--.||-.|-+-+.-++..
T Consensus 84 ~e~l~~al~~E~~~~~~~~~l~~~a~~~~---D~~~~~fl~~~l~eq~e~~~~l~~~l~~ 140 (165)
T 1eum_A 84 DELFQETYKHEQLITQKINELAHAAMTNQ---DYPTFNFLQWYVSEQHEEEKLFKSIIDK 140 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC---ChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888888889999999999999888764 4556667773457788898888877643
No 49
>2uw1_A Desaturase, plastid delta4 multifunctional acyl-ACYL carrier desaturase; electron transfer, oxidoreductase, lipid synthesis, fatty AC biosynthesis; HET: GVM; 1.95A {Hedera helix} PDB: 2uw1_B* 1oq4_A 1oq7_A 1oq9_A 1oqb_A 2xz0_A* 2xz1_A* 1afr_A 2j2f_A
Probab=82.80 E-value=0.45 Score=44.99 Aligned_cols=45 Identities=22% Similarity=0.248 Sum_probs=34.7
Q ss_pred cccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhc
Q 022114 150 EFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLS 194 (302)
Q Consensus 150 EFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~ 194 (302)
|-.-.+.|..++|.-+.. .|.|++|.+..|+||+||.+|--+-++
T Consensus 171 E~AT~vsh~n~~r~A~~~gdPvLa~i~~~IA~DE~RH~~~Y~~~v~ 216 (338)
T 2uw1_A 171 ERATFISHANTAKLAQHYGDKKLAHICGSIASDEKRHATAYTKIVE 216 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444466777777664444 999999999999999999998665554
No 50
>2jd6_0 Ferritin homolog, ferritin; metal transport, iron, pores, archaeon, entry channels, thermostability, hyperthermophIle, ferroxidase center; 2.75A {Pyrococcus furiosus} PDB: 2jd7_0 2jd8_0 2x17_0
Probab=82.38 E-value=3.2 Score=33.20 Aligned_cols=135 Identities=15% Similarity=0.136 Sum_probs=102.2
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccc
Q 022114 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKP 216 (302)
Q Consensus 138 ~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~P 216 (302)
..++-|-+-...|+....+|--++...++. -|.+++.|.-.|-+|..||.-|=+-+.+.|-.++++-+.+.+ -.|-.+
T Consensus 5 ~~~~~Ln~~l~~El~a~~~Yl~~a~~~~~~~~~~l~~~f~~~a~ee~~had~laeri~~lGg~p~~~~i~~~~-~~~~~~ 83 (174)
T 2jd6_0 5 RMLKALNDQLNRELYSAYLYFAMAAYFEDLGLEGFANWMKAQAEEEIGHALRFYNYIYDRNGRVELDEIPKPP-KEWESP 83 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCC-CCCSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCC-cCcCCH
Confidence 467778888899998888888887766533 488999999999999999999999999999998887776653 334466
Q ss_pred hhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHhh
Q 022114 217 KFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (302)
Q Consensus 217 kfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (302)
.=++=+..=.||-.-..|-.+...-+..-+ +..-++++...++|-.|...+..++..
T Consensus 84 ~e~l~~~l~~E~~~~~~~~~~~~~A~~~~D---~~t~~~l~~~l~eq~e~~~~l~~~l~~ 140 (174)
T 2jd6_0 84 LKAFEAAYEHEKFISKSIYELAALAEEEKD---YSTRAFLEWFINEQVEEEASVKKILDK 140 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---HHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---HhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666777666666666666665544 456677776778888999988877653
No 51
>1s3q_A Ferritin; ferroxidase, four helix bundle, iron storage, metal binding; 2.10A {Archaeoglobus fulgidus} SCOP: a.25.1.1 PDB: 1sq3_A 3kx9_A
Probab=79.92 E-value=3.4 Score=33.99 Aligned_cols=136 Identities=15% Similarity=0.133 Sum_probs=111.3
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccc
Q 022114 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (302)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~ 215 (302)
+..++-|-+=...|+...-+|--+++-..+. -|-+++.|.-.|-+|-.||--|=+-+.+.|-.++|+-+.+- .-.|=.
T Consensus 6 ~~v~~~LN~qi~~El~as~~Yl~~a~~~~~~~l~g~a~~f~~~a~EE~~HA~~l~~~i~~~gg~~~l~~i~~p-~~~~~~ 84 (173)
T 1s3q_A 6 EKMVEALNRQINAEIYSAYLYLSMASYFDSIGLKGFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEEP-PSEWDS 84 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCC-CCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCC-CCCCCC
Confidence 3467888888899999999999888777655 59999999999999999999999999999999999988765 344556
Q ss_pred chhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHhh
Q 022114 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (302)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (302)
|.=++=+.+=-||.--..|-.++..-+.+-++.-.-++.| --.||-.|-+-+.-++..
T Consensus 85 ~~e~le~aL~~E~~v~~~~~~l~~~a~~~~D~~t~~fle~---~l~eq~e~~~~l~~~l~~ 142 (173)
T 1s3q_A 85 PLAAFEHVYEHEVNVTKRIHELVEMAMQEKDFATYNFLQW---YVAEQVEEEASALDIVEK 142 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHH---HHHHHHHHHHHHHHHHHH
Confidence 7788888899999999999999999988766655544444 457788898888776643
No 52
>3olj_A Ribonucleoside-diphosphate reductase subunit M2; metal-binding, HRRM2, oxidoreductase; 2.10A {Homo sapiens} PDB: 4djn_A
Probab=79.61 E-value=0.73 Score=41.23 Aligned_cols=49 Identities=24% Similarity=0.121 Sum_probs=35.9
Q ss_pred HHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhc
Q 022114 142 FLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLS 194 (302)
Q Consensus 142 FLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~ 194 (302)
+||. +-- ++||...--+++|. +=|-++++..+.+|||+.|..|.-.-.+
T Consensus 166 ~lEg-i~f-~~~F~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~~~~~l~~ 214 (286)
T 3olj_A 166 AVEG-IFF-SGSFASIFWLKKRG--LMPGLTFSNELISRDEGLHCDFACLMFK 214 (286)
T ss_dssp HHHH-TTT-HHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHH-HHHHHHHHHHHHCC--CchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4553 433 66777555677765 6799999999999999999988655444
No 53
>3oj5_A Ferritin family protein; ferroxidase, cytosol, oxidoreductase; 2.85A {Mycobacterium tuberculosis} PDB: 3qd8_A
Probab=78.95 E-value=4.6 Score=33.11 Aligned_cols=135 Identities=14% Similarity=0.167 Sum_probs=101.7
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccc
Q 022114 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKP 216 (302)
Q Consensus 138 ~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~P 216 (302)
..++-|-+-...|+....+|--++...+.. -|.+++.|.-.|-+|..||.-|=+-+.+.|-.++++-+.+.+ -.+-.+
T Consensus 10 ~v~~~LN~~la~El~a~~~Yl~~a~~~~~~gf~~l~~~f~~~a~ee~~Had~laeri~~lGg~p~~~~i~~~~-~~~~~~ 88 (189)
T 3oj5_A 10 KFHALMQEQIHNEFTAAQQYVAIAVYFDSEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVR-NQFDRP 88 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCC-CCCSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCCCCCC-CCCCCH
Confidence 467888888899998888888777766544 488999999999999999999999999999998887776653 223355
Q ss_pred hhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHhh
Q 022114 217 KFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (302)
Q Consensus 217 kfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (302)
.=++=+..=.|+..-..|-.+...-+..- -+..-++++..-++|-.|-..+..++..
T Consensus 89 ~e~l~~~l~~E~~~~~~~~~l~~~A~~~~---D~~t~~~l~~~l~eqe~~~~~l~~~l~~ 145 (189)
T 3oj5_A 89 REALALALDQERTVTDQVGRLTAVARDEG---DFLGEQFMQWFLQEQIEEVALMATLVRV 145 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666666667766556656665555554 4556677776778899999999888753
No 54
>3qhb_A Symerythrin, ORF180; four-helix bundle, carboxylate bridged-DIIRON, ferritin-like superfamily, metal transport; 1.20A {Cyanophora paradoxa} PDB: 3qhc_A 3sid_A
Probab=77.50 E-value=0.4 Score=41.44 Aligned_cols=149 Identities=17% Similarity=0.240 Sum_probs=89.3
Q ss_pred ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccc-hhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhh
Q 022114 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSG-FLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFL 189 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSG-flLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFl 189 (302)
.|||.-|.--+-|-+.+..++. -++-|..+-..|-.- --.|...++.-++. .|.|+.+|.-.|..|..||.-.
T Consensus 3 ~~~~~~~~~~~~~f~~~~~i~~-----T~eNL~~A~~GE~~E~~~~Y~~fA~~A~~EG~~~IA~~F~~~A~~E~~HA~r~ 77 (179)
T 3qhb_A 3 NYNQEDFMGLDRFFQDAVSHNN-----TDANAASSIEVEMYECDCMYPTFAEIARRSGQPEIGAMFDAIAKEEGMHAQLL 77 (179)
T ss_dssp SSCCCCGGGGGGGCCCCCCCSS-----HHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHhHHHHHHHhcccCc-----HHHHHHHHHHhHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHH
Confidence 5788877766655444444443 356677777777766 33565555555444 8999999999999999999988
Q ss_pred hhhhcccccccc------cccccccCccccccchhhhhhhh------hc--------c-ccchhhHHHHHHHhhhCCCCc
Q 022114 190 NKGLSDFNYALD------LGFLTKARKYTFFKPKFIFYATY------LS--------E-KIGYWRYITIYRHLKANPEFQ 248 (302)
Q Consensus 190 Nkal~Df~l~lD------LgfLtk~k~YTfF~PkfIfYAtY------LS--------E-KIGYwRYItIyRHLe~~Pe~r 248 (302)
-+.|........ +..+. .-.| |..++=.|- |- | .-.|-.|+-+=| +--
T Consensus 78 ~kll~~l~~~~~~~~~~~~~~v~-~~~~----p~~~~~~T~eN~~~~L~~A~~GE~~E~~~mYp~fA~~A~------eEG 146 (179)
T 3qhb_A 78 TKLYSELEVKDSAETLEAKRLVS-TIES----QIDAVASDSRGLRRALETALEVETIESQKTYPAFAKLAA------EQG 146 (179)
T ss_dssp HHHSTTCCCCCCHHHHHHHHHHH-HHHH----THHHHHHSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH------HTT
T ss_pred HHHHhcccccccccccccccccc-cccc----cccccCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH------HCC
Confidence 888876432210 00000 0011 111111111 00 0 012333333322 223
Q ss_pred ccchhhhhHhhhhccccchhHHHHHHhh
Q 022114 249 CYPIFKYFENWCQDENRHGDFFSALMKA 276 (302)
Q Consensus 249 f~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (302)
+--|=++|+.=+.+|-+|++-|..++..
T Consensus 147 ~~eiA~~F~~ia~~Ek~H~~ry~~ll~~ 174 (179)
T 3qhb_A 147 NMEVATAFEAIVKSETKHANWVKRALEN 174 (179)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5557899999999999999999988764
No 55
>1za0_A Possible acyl-[acyl-carrier protein] desaturase D (acyl-[ACP] desaturase) (stearoyl-ACP...; four-helix bundle, metal binding protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.2
Probab=77.05 E-value=1.1 Score=40.97 Aligned_cols=165 Identities=16% Similarity=0.132 Sum_probs=87.5
Q ss_pred cHHHHHHHHHHHhhccCCcccccCh---hHHH--------HhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc
Q 022114 98 NQAEFEALLQEFKTDYNQTHFVRNK---EFKE--------AADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (302)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~---eF~~--------~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~ 166 (302)
+++.++..|+ ..+.-|.+-|+-.+ .|+. ....||++.+.. |+--+.-| ++-..|.-.-.++-.
T Consensus 18 ~~~~~~~~l~-~~~~W~p~d~lPw~~~~~F~~~~~~~~~~~~~~L~d~~~~~----l~~~~itE-d~LP~Y~~~L~~~~~ 91 (275)
T 1za0_A 18 VEANMTRHLD-TEDIWFAHDYVPFDQGENFAFLGGRDWDPSQSTLPRTITDA----CEILLILK-DNLAGHHRELVEHFI 91 (275)
T ss_dssp HHHHHHHHHH-TCCCCCGGGGCCGGGCCCCGGGTSCCCCGGGCCSCHHHHHH----HHHHHHHH-HC-------------
T ss_pred HHHHHHHHhh-hhccCChhhcCCCcccccchhcccccccHhhccCCHHHHHH----HHHHHHHh-hcchHHHHHHHHhcC
Confidence 4456666777 77778888888766 5643 335677765554 34444556 566666644344443
Q ss_pred cChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccc---ccchh-----hhhhhhhccccchhhHHHHH
Q 022114 167 TNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTF---FKPKF-----IFYATYLSEKIGYWRYITIY 238 (302)
Q Consensus 167 ~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTf---F~Pkf-----IfYAtYLSEKIGYwRYItIy 238 (302)
.++..+.--.-=...|.||+=-||+-|---|. +|...|-+.+.|.. |.|.. -+=.|-.-|+-- -.-|
T Consensus 92 ~d~~w~~w~~~WtaEE~rHg~aL~~YL~~sg~-vdp~~lE~~~~~~i~~g~~~~~~~p~~~~vy~~fqE~aT----~v~y 166 (275)
T 1za0_A 92 LEDWWGRWLGRWTAEEHLHAIALREYLVVTRE-VDPVANEDVRVQHVMKGYRAEKYTQVETLVYMAFYERCG----AVFC 166 (275)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-SCTTTTTCTTC----------CCCHHHHHHHHHHHHHHH----HHHH
T ss_pred CCchHHHHhhhHhHHHHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHH----HHHH
Confidence 45667776666678999999999999975565 78888888877532 22321 111111222211 0114
Q ss_pred HHhhhCCCCcccchhh-hhHhhhhccccchhHHHHHHhh
Q 022114 239 RHLKANPEFQCYPIFK-YFENWCQDENRHGDFFSALMKA 276 (302)
Q Consensus 239 RHLe~~Pe~rf~PIFk-~Fe~WCqDEnRHGdfFa~lmra 276 (302)
|.+.+.-+ .|+.+ -...=-.||+||..||.-+++.
T Consensus 167 ~n~a~~~~---dPvL~~i~~~IA~DE~RH~~~y~~~v~~ 202 (275)
T 1za0_A 167 RNLAAQIE---EPILAGLIDRIARDEVRHEEFFANLVTH 202 (275)
T ss_dssp HHHHHHCC---SHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcC---ChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44443222 45431 2222336999999999877664
No 56
>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}
Probab=76.14 E-value=1.4 Score=36.13 Aligned_cols=56 Identities=18% Similarity=0.300 Sum_probs=43.0
Q ss_pred HHHHHhhhhccccch-hhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcc
Q 022114 140 VEFLERSCTAEFSGF-LLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSD 195 (302)
Q Consensus 140 idFLerScTaEFSGf-lLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~D 195 (302)
.+-|+...-.|-.-+ -.|.+..+.-++. .+.++.+|..+++||.+|+.-.-+.|..
T Consensus 84 ~enL~~A~~GE~~e~~~~Y~~~a~~A~~eG~~~ia~~f~~~a~~E~~Ha~~~~~~l~~ 141 (144)
T 4di0_A 84 RQNLQSAIAGETHEYTDMYPGMAKTARDEGFEEIANWFETLAKAERSHANRYTKALDG 141 (144)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 455666667776665 3676666655444 8999999999999999999998888864
No 57
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=75.97 E-value=6.3 Score=30.57 Aligned_cols=75 Identities=11% Similarity=0.174 Sum_probs=45.3
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCC-------hHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHH
Q 022114 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ-------GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVA 172 (302)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~-------~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~la 172 (302)
+++..+...+ |.|..-.+--+||...+..+- +...+..++-+-+.+-..=+|.|-|.|+.+-++ ++|.+.
T Consensus 88 ~~~~~~F~~~--D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~-~~~~~~ 164 (198)
T 2r2i_A 88 QKLRWYFKLY--DVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQ-KDEVLL 164 (198)
T ss_dssp HHHHHHHHHH--CTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHT-TCHHHH
T ss_pred HHHHHHHHHh--cCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-cCHHHH
Confidence 3444444443 556666677777876665441 222233344444455556678888888888775 678888
Q ss_pred HHhhc
Q 022114 173 EIFSL 177 (302)
Q Consensus 173 e~F~l 177 (302)
+++..
T Consensus 165 ~~~~~ 169 (198)
T 2r2i_A 165 DILTR 169 (198)
T ss_dssp HHHHS
T ss_pred HHHhc
Confidence 87764
No 58
>3bvf_A Ferritin; iron storage, metal-binding, oxidoreductase; 1.50A {Helicobacter pylori} PDB: 3bve_A 3bvi_A 3bvk_A 3bvl_A 3egm_A
Probab=75.37 E-value=5.1 Score=32.98 Aligned_cols=122 Identities=16% Similarity=0.137 Sum_probs=98.1
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccc
Q 022114 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (302)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~ 215 (302)
+..++-|-+-...|+....+|--+++-.++. -|-+++.|.-.|-+|..||--|=+-+.+.|-.++++-+.+- .-.|-.
T Consensus 18 ~~~~~~LN~~i~~El~a~~~Yl~~a~~~~~~gl~~~a~~f~~~a~EE~~HA~~l~e~i~~lGG~p~l~~i~~p-~~~~~~ 96 (181)
T 3bvf_A 18 KDIIKLLNEQVNKEMNSSNLYMSMSSWCYTHSLDGAGLFLFDHAAEEYEHAKKLIIFLNENNVPVQLTSISAP-EHKFEG 96 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCC-CCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCC-CCCCCC
Confidence 4577888888899999999999888877554 58999999999999999999999999999999998887766 344556
Q ss_pred chhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhc
Q 022114 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQD 262 (302)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqD 262 (302)
+.=++=+..=-||.---.|-.+...-++.-+. .+.++|+.--.|
T Consensus 97 ~~e~le~aL~~E~~~~~~~~~l~~~A~~~~D~---~t~~~l~~~l~e 140 (181)
T 3bvf_A 97 LTQIFQKAYEHEQHISESINNIVDHAIKSKDH---ATFNFLQWYVAE 140 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH---HHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH---hHHHHHHHHHHH
Confidence 77788888888988888888888887776544 455566655655
No 59
>2uw1_A Desaturase, plastid delta4 multifunctional acyl-ACYL carrier desaturase; electron transfer, oxidoreductase, lipid synthesis, fatty AC biosynthesis; HET: GVM; 1.95A {Hedera helix} PDB: 2uw1_B* 1oq4_A 1oq7_A 1oq9_A 1oqb_A 2xz0_A* 2xz1_A* 1afr_A 2j2f_A
Probab=75.36 E-value=1.3 Score=41.91 Aligned_cols=54 Identities=17% Similarity=0.328 Sum_probs=38.2
Q ss_pred chhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHh----hCccchhh
Q 022114 230 GYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMK----AQPQFLND 283 (302)
Q Consensus 230 GYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmr----aqP~ll~g 283 (302)
+|-|+|+-+-.+..+-...-.|...|-..|--.||||||....-|. .+|..+..
T Consensus 85 tY~~~L~~~fgvrd~~g~~~~~w~~w~~~WtaEEnrHg~aL~~YL~lsgrvDp~~lE~ 142 (338)
T 2uw1_A 85 TYMSMLNRCDGIKDETGAEPSAWAMWTRAWTAEENRHGDLLNKYLYLSGRVDMRKIEK 142 (338)
T ss_dssp HHHHHHTTSTTTSCSSSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHH
T ss_pred HHHHHHHHHcCcccccCCCcchHHHHhhhHhHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 4556665554554443334578889999999999999999886554 67776644
No 60
>2hz8_A De novo designed DIIRON protein; four-helix bundle, de novo protein; NMR {Escherichia coli} PDB: 2lfd_A 2lff_A
Probab=74.30 E-value=0.5 Score=38.98 Aligned_cols=68 Identities=22% Similarity=0.319 Sum_probs=56.5
Q ss_pred HHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhc
Q 022114 125 KEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLS 194 (302)
Q Consensus 125 ~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~ 194 (302)
+..+....+...+++.+-|-....||.+-..+|..|.... -|+....++.-..+||-||.|..-....
T Consensus 19 ~~~~~~~~~~~~~el~~lIr~~ikaE~~AI~~Y~qLA~~A--P~ee~k~iI~eIr~DE~rH~~~F~~lY~ 86 (115)
T 2hz8_A 19 KEVLKKAKEGDEQELARLIQEIVKAEKQAVKVYKEAAEKA--RNPEKRQVIDKILEDEEKHIEWLKAASK 86 (115)
T ss_dssp HHHHHHHHHTCHHHHTTTHHHHHHHHHHHHHHHHHHHHSC--CCTTTTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445554555677788888888899999999999999977 6888999999999999999998877766
No 61
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=73.14 E-value=3.9 Score=31.05 Aligned_cols=65 Identities=17% Similarity=0.275 Sum_probs=36.7
Q ss_pred ccCCcccccChhHHHHhhcC------------ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhc
Q 022114 112 DYNQTHFVRNKEFKEAADKM------------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSL 177 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l------------~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~l 177 (302)
|.|..-.+--+||...+..+ .++....-++-+-+.+-..=+|.|-|.|+.+-++ ++|.+.++|.+
T Consensus 109 D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~-~~~~~~~~~~~ 185 (190)
T 1g8i_A 109 DLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSK-ADPSIVQALSL 185 (190)
T ss_dssp CTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHH-HCHHHHHHHCC
T ss_pred cCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHH-hChHHHHHHhh
Confidence 55555666666776554431 1112222233334444555678888888877664 56777777654
No 62
>2o1z_A Ribonucleotide reductase subunit R2; small subunit ribonucleotide reductase, oxidoreductase, DNA replication, iron, DIIRON, radical, R2 subunit; 2.40A {Plasmodium vivax}
Probab=73.13 E-value=6.9 Score=35.49 Aligned_cols=143 Identities=12% Similarity=0.105 Sum_probs=76.5
Q ss_pred HHhhcCChHHHHHHHHHHHhhhhcc-ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccc-------
Q 022114 126 EAADKMQGPLRQIFVEFLERSCTAE-FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFN------- 197 (302)
Q Consensus 126 ~~~d~l~~~~r~~FidFLerScTaE-FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~------- 197 (302)
++|.+|+++.|..+.-=|--=..++ ..|-.+--.+.+-+ .+|++.-.+...+=+|++|+-.-+.-+.-++
T Consensus 74 ~dw~~Lt~~Er~~~~~~l~~~~~~D~iv~~~l~~~l~~~v--~~~E~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e~~ 151 (311)
T 2o1z_A 74 KDFEKLNDNEKHFIKHVLAFFAASDGIVLENLASKFLRQV--KITEAKKFYAFQIAVENIHSETYSLLIDNYIKDEKERM 151 (311)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHC-------CHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 4677888888876654332211111 22233334455656 6799999999999999999876665555543
Q ss_pred ----cccccccccccCc-----c----ccccchhhhhhhhhccccch-hhHHHHHHHhhhCCCCcccchhhhhHhhhhcc
Q 022114 198 ----YALDLGFLTKARK-----Y----TFFKPKFIFYATYLSEKIGY-WRYITIYRHLKANPEFQCYPIFKYFENWCQDE 263 (302)
Q Consensus 198 ----l~lDLgfLtk~k~-----Y----TfF~PkfIfYAtYLSEKIGY-wRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDE 263 (302)
-..+...|.++-+ | ++. -+.|-| ++-|.|=+ -=|-.|| .|.++. ..-=+=+=.+-=+.||
T Consensus 152 ~~f~~~~~~p~l~~K~~~i~~~~~~~~~~~-~~lva~--~~lEGi~fysgF~~~~-~l~~~g--~m~g~~~~i~~I~RDE 225 (311)
T 2o1z_A 152 NLFHAIENIPAVKNKALWAAKWINDTNSFA-ERIVAN--ACVEGILFSGSFCAIF-WFKKQN--KLHGLTFSNELISRDE 225 (311)
T ss_dssp HHHHHHTTSHHHHHHHHHHHHHSSTTSCHH-HHHHHH--HHHHHTTTHHHHHHHH-HHHHTT--CCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHcCccHHH-HHHHHH--HHHHHHHHHHHHHHHH-HHHHcC--CcccHHHHHHHHHHHH
Confidence 2233334432200 1 111 122323 24555532 3344444 454442 2222222334446799
Q ss_pred ccchhHHHHHHhh
Q 022114 264 NRHGDFFSALMKA 276 (302)
Q Consensus 264 nRHGdfFa~lmra 276 (302)
.+||+|...+++.
T Consensus 226 ~~H~~f~~~l~~~ 238 (311)
T 2o1z_A 226 GLHTDFNCLIYSL 238 (311)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999875
No 63
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=72.44 E-value=7.6 Score=30.84 Aligned_cols=64 Identities=14% Similarity=0.128 Sum_probs=39.5
Q ss_pred ccCCcccccChhHHHHhhcC------ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhh
Q 022114 112 DYNQTHFVRNKEFKEAADKM------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFS 176 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l------~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~ 176 (302)
|.|..-++--+||...+..+ .+...++-++-+-+.+-..=+|.|-|.|+.+-+. ++|.+.++|.
T Consensus 103 D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~-~~~~~~~~~~ 172 (211)
T 2ggz_A 103 DADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMA-KDQDLLEIVY 172 (211)
T ss_dssp CTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHH-TTTTTHHHHH
T ss_pred cCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHH-hCHHHHHHHh
Confidence 66666677777776655443 2222223333333444455578888888888775 6788888877
No 64
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=72.17 E-value=14 Score=28.32 Aligned_cols=70 Identities=19% Similarity=0.153 Sum_probs=50.1
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 022114 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (302)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (302)
......++++.++..+ |.|..-.+--+||...+.....+.+..-+.-+-+.+-..=+|.|-..|+.+-++
T Consensus 67 ~~~~~~~~~~~~~~~~--D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 136 (204)
T 3e3r_A 67 GLVLDQAEAEGVCRKW--DRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYS 136 (204)
T ss_dssp TCCCCHHHHHHHHHHH--CTTCSSSBCHHHHHHHTSCCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHCC
T ss_pred CCCCCHHHHHHHHHHh--ccCCCCcCcHHHHHHHHHhhcCchHHHHHHHHHHHhCcCCCCeEeHHHHHHHHc
Confidence 4556677888888887 555555666678877777665555555555666666777889999999988775
No 65
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=72.06 E-value=10 Score=30.76 Aligned_cols=64 Identities=9% Similarity=0.258 Sum_probs=37.4
Q ss_pred ccCCcccccChhHHHHhh---------cCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhh
Q 022114 112 DYNQTHFVRNKEFKEAAD---------KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFS 176 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d---------~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~ 176 (302)
|.|..=++--+||...+. .++++.-+..++-+.+.+-..=.|.|-|.|..+-++ ++|.+.+.|.
T Consensus 139 D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~-~~p~~~~~l~ 211 (214)
T 2l4h_A 139 DFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS-RSPDFASSFK 211 (214)
T ss_dssp CTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHHHHH-TCHHHHHHTS
T ss_pred CCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHH-hChHHHHhcc
Confidence 555555666666655442 344444444444455555555567777777777664 5677766654
No 66
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=72.04 E-value=8.7 Score=29.14 Aligned_cols=65 Identities=14% Similarity=0.242 Sum_probs=38.4
Q ss_pred ccCCcccccChhHHHHhhcC----C--------hHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhc
Q 022114 112 DYNQTHFVRNKEFKEAADKM----Q--------GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSL 177 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l----~--------~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~l 177 (302)
|.|..-.+--+||...+..+ . +.....-++-+-+.+-..=+|.|-|.|+.+-++ ++|.+.++|..
T Consensus 109 D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~-~~~~~~~~~~~ 185 (190)
T 1fpw_A 109 DLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSK-VDPSIIGALNL 185 (190)
T ss_dssp CSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHH-SSTTHHHHHHH
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-hChHHHHHHhh
Confidence 55655666667776555431 0 112222233333444555678888888888775 67888887764
No 67
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=71.28 E-value=6.7 Score=28.80 Aligned_cols=94 Identities=16% Similarity=0.311 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHhh-ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc------cChhH
Q 022114 99 QAEFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK------TNPVV 171 (302)
Q Consensus 99 r~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~------~nP~l 171 (302)
.++++.+..-|+. |.|+.-.+--+||...+..+....-..-++-+.+.+ +|.|-|.|...-+.. ....+
T Consensus 12 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~----~g~i~~~eF~~~~~~~~~~~~~~~~l 87 (153)
T 2ovk_B 12 QRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQLNFTAFLTLFGEKVSGTDPEDAL 87 (153)
T ss_dssp HHHHHHHHHHHHHHCCSTTTCCCHHHHHHHTTTTTSCCCHHHHHHHHHHS----SSCCCSHHHHHTTTTTTTTCCCTTHH
T ss_pred HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHc----CCCCCHHHHHHHHHHHhccCChHHHH
Confidence 3445555555543 778878888888888776653222222233333333 999999987765543 23568
Q ss_pred HHHhhccccchhhhhhhhhh-----hhcccccc
Q 022114 172 AEIFSLMSRDEARHAGFLNK-----GLSDFNYA 199 (302)
Q Consensus 172 ae~F~lMaRDEARHAGFlNk-----al~Df~l~ 199 (302)
.++|..+-+| +-|+|+. +|..+|..
T Consensus 88 ~~~F~~~D~d---~~G~I~~~el~~~l~~~g~~ 117 (153)
T 2ovk_B 88 RNAFSMFDED---GQGFIPEDYLKDLLENMGDN 117 (153)
T ss_dssp HHHHHTTCSS---CSSCCCHHHHHHHHHHSSSC
T ss_pred HHHHHHHCCC---CCCeEcHHHHHHHHHHcCCC
Confidence 8999887665 4576654 45555543
No 68
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=70.16 E-value=4.2 Score=29.98 Aligned_cols=53 Identities=15% Similarity=0.177 Sum_probs=27.9
Q ss_pred ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 022114 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (302)
|.|..-++--+||...+..+....-..=++-+.+.+-.. +|.|-|.|..+-++
T Consensus 97 D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~ 149 (156)
T 1wdc_B 97 DEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIK 149 (156)
T ss_dssp CTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHH
T ss_pred CcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHh
Confidence 555555566666665555442222222234444445455 77777777666554
No 69
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=70.11 E-value=15 Score=25.48 Aligned_cols=85 Identities=15% Similarity=0.101 Sum_probs=52.4
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhh----cCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCh
Q 022114 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAAD----KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNP 169 (302)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d----~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP 169 (302)
...+..++++.+++.+ |.|..-.+--+||...+. ...+...+. +.-+-+.+-..=+|.|-+.|+.+-++...+
T Consensus 30 ~~~~~~~~~~~~~~~~--D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~-~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~ 106 (134)
T 1jfj_A 30 RAIKNEQLLQLIFKSI--DADGNGEIDQNEFAKFYGSIQGQDLSDDKIG-LKVLYKLMDVDGDGKLTKEEVTSFFKKHGI 106 (134)
T ss_dssp CCSSHHHHHHHHHHHH--CSSCCSEEEHHHHHHHTTCSSCCSSHHHHHH-HHHHHHHHCCSSSSEEEHHHHHHHHTTTTC
T ss_pred CCCCCHHHHHHHHHHH--cCCCCCeEcHHHHHHHHHHhcccccCCCHHH-HHHHHHHHCCCCCCccCHHHHHHHHHHhCH
Confidence 3455567788887766 555555666678877663 222222222 444555666777899999999887764432
Q ss_pred -hHHHHhhccccc
Q 022114 170 -VVAEIFSLMSRD 181 (302)
Q Consensus 170 -~lae~F~lMaRD 181 (302)
.+.++|..+-.|
T Consensus 107 ~~~~~~~~~~D~~ 119 (134)
T 1jfj_A 107 EKVAEQVMKADAN 119 (134)
T ss_dssp HHHHHHHHHHHCS
T ss_pred HHHHHHHHHhCCC
Confidence 266666665544
No 70
>3qhb_A Symerythrin, ORF180; four-helix bundle, carboxylate bridged-DIIRON, ferritin-like superfamily, metal transport; 1.20A {Cyanophora paradoxa} PDB: 3qhc_A 3sid_A
Probab=69.82 E-value=1.9 Score=37.17 Aligned_cols=61 Identities=20% Similarity=0.259 Sum_probs=47.2
Q ss_pred HHHHHHHHHHhhhhccccc-hhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcc
Q 022114 135 LRQIFVEFLERSCTAEFSG-FLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSD 195 (302)
Q Consensus 135 ~r~~FidFLerScTaEFSG-flLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~D 195 (302)
+.+--.+-|+.+...|--- --.|.+..+.-+.. ++.++..|..++.+|.+|+.-..++|..
T Consensus 112 T~eN~~~~L~~A~~GE~~E~~~mYp~fA~~A~eEG~~eiA~~F~~ia~~Ek~H~~ry~~ll~~ 174 (179)
T 3qhb_A 112 DSRGLRRALETALEVETIESQKTYPAFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRALEN 174 (179)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444577777777753 35688888777665 8999999999999999999999888764
No 71
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=69.77 E-value=14 Score=28.76 Aligned_cols=75 Identities=17% Similarity=0.238 Sum_probs=39.4
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhh--------cCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhH
Q 022114 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAAD--------KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVV 171 (302)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d--------~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~l 171 (302)
+++..+...+ |.|..-++--+||...+. .++++.-+..++-+-+.+-..=+|.|-|.|..+-++ .+|.+
T Consensus 111 ~~l~~~F~~~--D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~-~~~~~ 187 (207)
T 2ehb_A 111 EKVKFAFKLY--DLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVS-LNPSL 187 (207)
T ss_dssp HHHHHHHHHH--CTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH-HCGGG
T ss_pred HHHHHHHHHh--CCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-hChHH
Confidence 3344444433 445555566666655442 344444333333333445555677777777776664 46666
Q ss_pred HHHhhc
Q 022114 172 AEIFSL 177 (302)
Q Consensus 172 ae~F~l 177 (302)
.+.+..
T Consensus 188 ~~~~~~ 193 (207)
T 2ehb_A 188 IKNMTL 193 (207)
T ss_dssp GGGGCC
T ss_pred HHHhcc
Confidence 555544
No 72
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=69.44 E-value=10 Score=29.45 Aligned_cols=64 Identities=11% Similarity=0.122 Sum_probs=37.5
Q ss_pred ccCCcccccChhHHHHhhcCC--------h---------HHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHH
Q 022114 112 DYNQTHFVRNKEFKEAADKMQ--------G---------PLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEI 174 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~--------~---------~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~ 174 (302)
|.|..-.+--+||...+..+. + .....-++-+-+.+-..=+|.|-|.|+.+-++ ++|.+.++
T Consensus 105 D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~-~~~~~~~~ 183 (204)
T 1jba_A 105 DKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGAR-RDKWVMKM 183 (204)
T ss_dssp CSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHT-TTTTHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH-cChHHHHH
Confidence 556666666667765554330 0 02223333344444555578888888887775 67887777
Q ss_pred hh
Q 022114 175 FS 176 (302)
Q Consensus 175 F~ 176 (302)
+.
T Consensus 184 ~~ 185 (204)
T 1jba_A 184 LQ 185 (204)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 73
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=69.02 E-value=11 Score=28.57 Aligned_cols=31 Identities=23% Similarity=0.300 Sum_probs=18.4
Q ss_pred hhhccccchhhHHHHhhhhcccChhHHHHhhc
Q 022114 146 SCTAEFSGFLLYKELGRRLKKTNPVVAEIFSL 177 (302)
Q Consensus 146 ScTaEFSGflLyKEl~rrlk~~nP~lae~F~l 177 (302)
.+-..=+|.|-|.|+.+-++ .+|.+.++|..
T Consensus 155 ~~D~d~dG~I~~~Ef~~~~~-~~~~~~~~l~~ 185 (190)
T 2l2e_A 155 MMDKNKDGQLTLEEFCEGSK-RDPTIVSALSL 185 (190)
T ss_dssp HHTCCSSCCBCHHHHHHHHH-TCTHHHHHHHT
T ss_pred HhCCCCCCcCcHHHHHHHHH-hCcHHHHHHHH
Confidence 33445567777777766554 56666666553
No 74
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=68.02 E-value=8.9 Score=29.18 Aligned_cols=63 Identities=17% Similarity=0.156 Sum_probs=33.0
Q ss_pred HHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 022114 101 EFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (302)
Q Consensus 101 E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (302)
+++.++..+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+.+-++
T Consensus 64 ~~~~~f~~~--D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~ 126 (190)
T 2l2e_A 64 FAEYVFNVF--DADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVD 126 (190)
T ss_dssp HHHHHHHHH--CSSSTTCEEHHHHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHH
T ss_pred HHHHHHHHh--cCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHH
Confidence 444444443 455555566667766665543211111222233444556678888888776553
No 75
>2p1i_A Ribonucleotide reductase, small chain; F222 twinning, plasmodb PY03671, S genomics consortium, SGC, oxidoreductase; 2.70A {Plasmodium yoelii yoelii}
Probab=66.94 E-value=13 Score=34.21 Aligned_cols=143 Identities=13% Similarity=0.089 Sum_probs=77.4
Q ss_pred HHhhcCChHHHHHHHHHHHhhhhcc-ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhccccc------
Q 022114 126 EAADKMQGPLRQIFVEFLERSCTAE-FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNY------ 198 (302)
Q Consensus 126 ~~~d~l~~~~r~~FidFLerScTaE-FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l------ 198 (302)
++|.+|+++.|..+.-=|--=..++ ..|-.+-..+..-+ .+|++.-.+...+=.|+.|+-.-..-+.-++.
T Consensus 75 ~dw~~Lt~~Er~~~~~~l~~~~~~D~iv~~~l~~~l~~~v--~~~E~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e~~ 152 (349)
T 2p1i_A 75 KDFEKLNVNEKHFIKHVLAFFAASDGIVLENLASKFLREV--EIIEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERL 152 (349)
T ss_dssp HHHHHSCTTTHHHHHHHHHHHTTC-----CCCHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSHHHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 4667778877776654332211111 12222333455556 67999999999999999998776665555442
Q ss_pred -----ccccccccccC-----cc----ccccchhhhhhhhhccccch-hhHHHHHHHhhhCCCCcccchhhhhHhhhhcc
Q 022114 199 -----ALDLGFLTKAR-----KY----TFFKPKFIFYATYLSEKIGY-WRYITIYRHLKANPEFQCYPIFKYFENWCQDE 263 (302)
Q Consensus 199 -----~lDLgfLtk~k-----~Y----TfF~PkfIfYAtYLSEKIGY-wRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDE 263 (302)
..+...|.|+- -| ++. -+.|-+ ++-|.|=+ -=|..|| .|.++. ..--+=+=.+-=+.||
T Consensus 153 ~~f~~~~~~p~l~~K~~~i~~~~~~~~~~~-~~lva~--~~lEGi~FysgF~~~~-~l~~~g--~m~g~~~~i~~I~RDE 226 (349)
T 2p1i_A 153 NLFHAIENIPAIKNKALWAAKWINDTNSFA-ERIVAN--ACVEGILFSGSFCAIF-WFKKQN--KLHGLTFSNELISRDE 226 (349)
T ss_dssp HTTHHHHSCHHHHHHHHHHHHTSSCSSCHH-HHHHHH--HHHTTTTTHHHHHHHH-HHHTTT--CSTTHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHcCchHHH-HHHHHH--HHHHHHHHHHHHHHHH-HHHhcC--CCccHHHHHHHHHHHH
Confidence 12233333221 11 111 122333 34566632 3344454 555542 2222333344456799
Q ss_pred ccchhHHHHHHhh
Q 022114 264 NRHGDFFSALMKA 276 (302)
Q Consensus 264 nRHGdfFa~lmra 276 (302)
.+||++...+++.
T Consensus 227 ~~H~~f~~~l~~~ 239 (349)
T 2p1i_A 227 GLHTDFNCLIYSL 239 (349)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999875
No 76
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=66.25 E-value=5.9 Score=27.64 Aligned_cols=70 Identities=19% Similarity=0.188 Sum_probs=45.9
Q ss_pred ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc---c-----cChhHHHHhhccccc
Q 022114 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK---K-----TNPVVAEIFSLMSRD 181 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk---~-----~nP~lae~F~lMaRD 181 (302)
|.|+.-.+.-+||...+..+.....+.-++-+-+.+-..-+|.|-|.|+..-+. . ....+.++|..+-+|
T Consensus 10 D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f~~~D~d 87 (134)
T 1jfj_A 10 DVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVD 87 (134)
T ss_dssp CTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHHHHHCCC
Confidence 556666666677776666664444455566677777788899999999887663 1 123466666666544
No 77
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=66.08 E-value=2.5 Score=35.56 Aligned_cols=61 Identities=15% Similarity=0.045 Sum_probs=43.7
Q ss_pred HHHHhhhhccccc-hhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccc
Q 022114 141 EFLERSCTAEFSG-FLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALD 201 (302)
Q Consensus 141 dFLerScTaEFSG-flLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lD 201 (302)
+=|+.+.-.|--. --.|+++.+.-+.. ++.++.+|..++.||.+|+..+.++|....-+-|
T Consensus 70 enL~~a~~gE~~e~~~mY~~~a~~A~eeg~~~~a~~f~~i~~~E~~H~~~~~~~l~~l~~~~~ 132 (170)
T 3pwf_A 70 ENLQMGIEGETFEVEEMYPVYNKAAEFQGEKEAVRTTHYALEAEKIHAELYRKAKEKAEKGED 132 (170)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 4444444555432 34566666655443 8999999999999999999999999987754444
No 78
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=65.51 E-value=19 Score=28.94 Aligned_cols=65 Identities=14% Similarity=0.220 Sum_probs=33.7
Q ss_pred ccCCcccccChhHHHHhh--------cCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhc
Q 022114 112 DYNQTHFVRNKEFKEAAD--------KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSL 177 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d--------~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~l 177 (302)
|.|..-++--+||...+. .++++.-+..++-+-+.+-..=+|.|-|.|..+-++ ++|.+.+.+..
T Consensus 132 D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~-~~~~~~~~~~~ 204 (226)
T 2zfd_A 132 DLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL-RHPSLLKNMTL 204 (226)
T ss_dssp CTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHH-HSGGGGGGGCC
T ss_pred CCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-hChHHHHHhch
Confidence 555555566666655442 233333333333223344455567777777766554 45666555543
No 79
>3olj_A Ribonucleoside-diphosphate reductase subunit M2; metal-binding, HRRM2, oxidoreductase; 2.10A {Homo sapiens} PDB: 4djn_A
Probab=65.39 E-value=14 Score=32.90 Aligned_cols=143 Identities=12% Similarity=0.082 Sum_probs=70.7
Q ss_pred HHhhcCChHHHHHHHHHHHhhhh-cc-ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhccccc-----
Q 022114 126 EAADKMQGPLRQIFVEFLERSCT-AE-FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNY----- 198 (302)
Q Consensus 126 ~~~d~l~~~~r~~FidFLerScT-aE-FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l----- 198 (302)
++|..|+++.|.. +..+-.--| ++ ..|--+...+..-+ .+|++.-.+...+=.|+.|+-.-..-+.-++.
T Consensus 50 ~dw~~L~~~Er~~-~~~~l~~~~~~D~iv~~~l~~~~~~~v--~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e~ 126 (286)
T 3olj_A 50 QHWESLKPEERYF-ISHVLAFFAASDGIVNENLVERFSQEV--QITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKER 126 (286)
T ss_dssp HHHHHSCHHHHHH-HHHHHHHHHHHHHHHHHHHHHTHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_pred HHHHhCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 4667788877773 333221111 11 01112223334434 58999988999999999999876555544432
Q ss_pred ------ccccccccccCcc----------ccccchhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhc
Q 022114 199 ------ALDLGFLTKARKY----------TFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQD 262 (302)
Q Consensus 199 ------~lDLgfLtk~k~Y----------TfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqD 262 (302)
..+...|.|+-++ +|. -+.|-+ ++-|.|-|-=..++.-.|.++. ..--+=+=.+-=+.|
T Consensus 127 ~~~f~~~~~~p~l~~K~~~~~~~~~~~~~~~~-~~lva~--~~lEgi~f~~~F~~~~~l~~~g--~m~g~~~~i~~I~RD 201 (286)
T 3olj_A 127 EFLFNAIETMPCVKKKADWALRWIGDKEATYG-ERVVAF--AAVEGIFFSGSFASIFWLKKRG--LMPGLTFSNELISRD 201 (286)
T ss_dssp HHHHTHHHHCGGGHHHHHHHHHHHHCSSSCHH-HHHHHH--HHHHHTTTHHHHHHHHHHHHTT--CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHhCChhHHH-HHHHHH--HHHHHHHHHHHHHHHHHHHHCC--CchhHHHHHHHHHHH
Confidence 2334445443211 010 011211 1344443322222222443321 111111223344679
Q ss_pred cccchhHHHHHHhh
Q 022114 263 ENRHGDFFSALMKA 276 (302)
Q Consensus 263 EnRHGdfFa~lmra 276 (302)
|..||++...+.+.
T Consensus 202 E~~H~~~~~~l~~~ 215 (286)
T 3olj_A 202 EGLHCDFACLMFKH 215 (286)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988763
No 80
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=65.29 E-value=9.2 Score=28.90 Aligned_cols=65 Identities=11% Similarity=0.229 Sum_probs=35.5
Q ss_pred ccCCcccccChhHHHHhhcC------------ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhc
Q 022114 112 DYNQTHFVRNKEFKEAADKM------------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSL 177 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l------------~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~l 177 (302)
|.|..-.+--+||...+..+ +++.-..-++-+-+.+-..=+|.|-|.|..+-++ ++|.+.+.|+.
T Consensus 102 D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~-~~~~~~~~l~~ 178 (183)
T 1s6c_A 102 DINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQ-EDDNIMRSLQL 178 (183)
T ss_dssp CTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTT-SCCHHHHHHHH
T ss_pred CCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHh-cChHHHHHHHH
Confidence 55555566666776554432 1111112333344444555677888888877664 57777777664
No 81
>2v2p_A Ferritin light chain; metal transport, iron, haemin, apoferritin, iron storage, metal-binding; 1.15A {Equus caballus} PDB: 2v2r_A 2v2m_A 2v2l_A 2v2s_A 2v2o_A 2v2n_A 2za6_A 2v2j_A 2v2i_A 2z5p_A 1dat_A 2g4h_A 1aew_A 3h7g_A 2zg9_X 2zg8_X 3fi6_A 3o7r_A 2w0o_A 1hrs_A* ...
Probab=64.18 E-value=13 Score=30.48 Aligned_cols=135 Identities=13% Similarity=0.047 Sum_probs=109.3
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhcccC---hhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccc
Q 022114 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKTN---PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFF 214 (302)
Q Consensus 138 ~FidFLerScTaEFSGflLyKEl~rrlk~~n---P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF 214 (302)
..++-|-+=...|+.....|--+++-..+.+ |-+++.|.-.|-+|-.||--|=+-+.+.|-.++|+-+.+-..-.|=
T Consensus 11 ~v~~~LN~qi~~El~as~~Yl~~a~~~~~~~~~l~g~a~~f~~~s~EE~~HA~~l~~~i~~rgg~~~l~~i~~p~~~~~~ 90 (174)
T 2v2p_A 11 EVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRQLAQQKMQGAERLLKMQNQRGGRALFQDLQKPSQDEWG 90 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccccC
Confidence 4677788888999999999999999887644 9999999999999999999999999999999999998765233444
Q ss_pred cchhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhh-hhccccchhHHHHHHh
Q 022114 215 KPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENW-CQDENRHGDFFSALMK 275 (302)
Q Consensus 215 ~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~W-CqDEnRHGdfFa~lmr 275 (302)
.+.=++=+.+=-||.--.+|-.++..-+++-|+. ..+|++.| -.+|-.|-+-+.-++.
T Consensus 91 ~~~e~le~aL~~Ek~v~~~l~~l~~~a~~~~D~~---t~~fLe~~~l~eq~e~~~~l~~~l~ 149 (174)
T 2v2p_A 91 TTPDAMKAAIVLEKSLNQALLDLHALGSAQADPH---LCDFLESHFLDEEVKLIKKMGDHLT 149 (174)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH---HHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778888999999999999999999998876554 45666663 4667777777666554
No 82
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=63.92 E-value=9.7 Score=27.72 Aligned_cols=89 Identities=18% Similarity=0.238 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHhh-ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc------ChhH
Q 022114 99 QAEFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT------NPVV 171 (302)
Q Consensus 99 r~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~------nP~l 171 (302)
.++.+.+..-|+. |.|+.-.+--+||...+..+....-..-++-+.+.+-..=+|.|-|.|...-+... -..+
T Consensus 19 ~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 98 (161)
T 3fwb_A 19 EEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEI 98 (161)
T ss_dssp HHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHHH
Confidence 3344444444433 67777777777777666655322233335555566666667877777765444321 3457
Q ss_pred HHHhhccccchhhhhhhhh
Q 022114 172 AEIFSLMSRDEARHAGFLN 190 (302)
Q Consensus 172 ae~F~lMaRDEARHAGFlN 190 (302)
.++|..+-+| +-|+|+
T Consensus 99 ~~~F~~~D~d---~~G~i~ 114 (161)
T 3fwb_A 99 KRAFQLFDDD---HTGKIS 114 (161)
T ss_dssp HHHHHHHCTT---CSSEEC
T ss_pred HHHHHHHcCC---CCCeEe
Confidence 7778776554 345554
No 83
>1rcd_A L ferritin; iron storage; 2.00A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 1rcg_A 1rci_A 1rcc_A 1rce_A
Probab=63.37 E-value=14 Score=30.30 Aligned_cols=136 Identities=12% Similarity=0.053 Sum_probs=110.4
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc---ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccc
Q 022114 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTF 213 (302)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~---nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTf 213 (302)
+..++-|-+=...|+...-.|--+++-..+. -|-+++.|.-.|.+|-.||--|=+-+.+.|-.++|+-+.+-..-.|
T Consensus 11 ~~v~~~LN~qi~~El~as~~Yl~~a~~~~~~~~~l~g~a~~f~~~s~EE~~HA~~l~~~i~~rgg~~~l~~i~~p~~~~~ 90 (173)
T 1rcd_A 11 QDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEHAEKLIEYQNQRGGRVFLQSVEKPERDDW 90 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcccc
Confidence 3567788888899999999999999888652 4999999999999999999999999999999999999877634444
Q ss_pred ccchhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhh-hccccchhHHHHHHh
Q 022114 214 FKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWC-QDENRHGDFFSALMK 275 (302)
Q Consensus 214 F~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WC-qDEnRHGdfFa~lmr 275 (302)
=.|.=++=+.+=-||.--.+|-.++..-+++-|+. ..+|+++|. .++-.|-+-+.-++.
T Consensus 91 ~~~~e~le~aL~~E~~v~~~l~~l~~~a~~~~D~~---t~~fLe~~~l~eq~e~~~~l~~~l~ 150 (173)
T 1rcd_A 91 ANGLEALQTALKLQKSVNQALLDLHAVAADKSDPH---MTDFLESPYLSESVETIKKLGDHIT 150 (173)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH---HHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56778888999999999999999999998875544 456777554 566777777666553
No 84
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=62.22 E-value=7.8 Score=29.76 Aligned_cols=80 Identities=15% Similarity=0.233 Sum_probs=50.8
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccc
Q 022114 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMS 179 (302)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMa 179 (302)
+++..+...| |.|+.-++--+||...+..+-...-..-++-+.+.+-..=+|.|-|.|...-+....+.+.++|..+-
T Consensus 50 ~~l~~~F~~~--D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~i~~aF~~~D 127 (150)
T 2jjz_A 50 TAFKEKYMEF--DLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGKRSAVLKLVMMFE 127 (150)
T ss_dssp HHHHHHHTTS--CCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSSSCCHHHHHHC--
T ss_pred HHHHHHHHHh--CCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHhHHHHHHHHHHHc
Confidence 3444444433 77887888888888777655322212224444455555668999999998888766888999999877
Q ss_pred cc
Q 022114 180 RD 181 (302)
Q Consensus 180 RD 181 (302)
.|
T Consensus 128 ~d 129 (150)
T 2jjz_A 128 GK 129 (150)
T ss_dssp --
T ss_pred CC
Confidence 65
No 85
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=61.10 E-value=7.6 Score=28.77 Aligned_cols=86 Identities=16% Similarity=0.142 Sum_probs=50.6
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC-ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc-----
Q 022114 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT----- 167 (302)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~----- 167 (302)
.+.+..++++.++..+ |.|..-.+-=+||...+... .......-+.-+-+.+-..=+|.|-..|+.+-++..
T Consensus 58 ~~~~~~~~~~~~~~~~--d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~ 135 (169)
T 3qrx_A 58 GFEPKKEEIKKMISEI--DKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLT 135 (169)
T ss_dssp SCCCCHHHHHHHHHHH--CSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCC
T ss_pred CCCCCHHHHHHHHHHh--cCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCC
Confidence 5566677888888877 55555566667776554432 111112222223334456678888888887766433
Q ss_pred ChhHHHHhhccccc
Q 022114 168 NPVVAEIFSLMSRD 181 (302)
Q Consensus 168 nP~lae~F~lMaRD 181 (302)
...+.++|..+-.|
T Consensus 136 ~~~~~~~~~~~D~~ 149 (169)
T 3qrx_A 136 EEELQEMIAEADRN 149 (169)
T ss_dssp HHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHhCCC
Confidence 24577777766554
No 86
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=61.04 E-value=8.9 Score=27.56 Aligned_cols=65 Identities=20% Similarity=0.280 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 022114 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (302)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (302)
++++..+...+ |.|..-++--+||...+..+....-..=++-+.+.+-..=+|.|-|.|..+-++
T Consensus 75 ~~~l~~~F~~~--D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 139 (143)
T 3j04_B 75 EDVIRNAFACF--DEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILK 139 (143)
T ss_dssp HHHHHHHHTTS--CSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHH
T ss_pred HHHHHHHHHHH--CCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHh
Confidence 34444444433 666777777778877776554333333344555555555677777777776664
No 87
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=61.03 E-value=25 Score=27.35 Aligned_cols=64 Identities=23% Similarity=0.213 Sum_probs=37.3
Q ss_pred ccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc
Q 022114 95 KKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (302)
Q Consensus 95 ~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~ 166 (302)
.....++++.++..+ |.|..-.+--+||...+..+ .+.++.|-.| -..-+|.|-..|+.+-++.
T Consensus 58 ~~~~~~~~~~l~~~~--D~d~dG~I~~~EF~~~~~~~-~~~~~~F~~~-----D~d~~G~i~~~e~~~~l~~ 121 (191)
T 1y1x_A 58 VPFSLATTEKLLHMY--DKNHSGEITFDEFKDLHHFI-LSMREGFRKR-----DSSGDGRLDSNEVRAALLS 121 (191)
T ss_dssp BCCCHHHHHHHHHHH--CTTCSSSBCHHHHHHHHHHH-HHHHHHHHHH-----CTTSSSCBCHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHh--CCCCCCeEcHHHHHHHHHHH-HHHHHHHHHh-----CCCCCCeEcHHHHHHHHHH
Confidence 344556777777665 44444456666776555433 3455555433 4456777777777776643
No 88
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=60.65 E-value=21 Score=25.48 Aligned_cols=83 Identities=11% Similarity=0.101 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHhhccCCcccccChhHHHHhhcCChH-HHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-------hh
Q 022114 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGP-LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-------PV 170 (302)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~-~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n-------P~ 170 (302)
++|+..+...+ |.|+.-.+--+||...+..+... ........+.. .-+|.|-|.|...-+.... ..
T Consensus 4 ~~el~~~F~~~--D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 77 (145)
T 2bl0_B 4 ADQIQECFQIF--DKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ----LNAKEFDLATFKTVYRKPIKTPTEQSKE 77 (145)
T ss_dssp HHHHHHHHHHH--CTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH----HTSSEECHHHHHHHHTSCCCCGGGGHHH
T ss_pred HHHHHHHHHHh--CCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh----cCCCeEcHHHHHHHHHHHhhcCcccHHH
Confidence 44566666655 66677777778887666544211 12222222222 5678888888776664432 46
Q ss_pred HHHHhhccccchhhhhhhhh
Q 022114 171 VAEIFSLMSRDEARHAGFLN 190 (302)
Q Consensus 171 lae~F~lMaRDEARHAGFlN 190 (302)
+.++|..+-+| +-|+|+
T Consensus 78 l~~~F~~~D~d---~~G~i~ 94 (145)
T 2bl0_B 78 MLDAFRALDKE---GNGTIQ 94 (145)
T ss_dssp HHHHHHHHCSS---SSSEEE
T ss_pred HHHHHHHhCCC---CCCeEc
Confidence 77888776554 345543
No 89
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=60.43 E-value=7.9 Score=27.74 Aligned_cols=87 Identities=11% Similarity=0.229 Sum_probs=48.7
Q ss_pred HHHHHHHHHhh-ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc----------Ch
Q 022114 101 EFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT----------NP 169 (302)
Q Consensus 101 E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~----------nP 169 (302)
+.+.+..-|+. |.|+.-.+--+||...+..+....-..-++-+.+.+-..-+|.|-|.|...-+... -.
T Consensus 9 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~ 88 (153)
T 3ox6_A 9 EIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVK 88 (153)
T ss_dssp HHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHH
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHH
Confidence 33334333332 55666677777887766655322223334445556666678888888876554211 13
Q ss_pred hHHHHhhccccchhhhhhhhh
Q 022114 170 VVAEIFSLMSRDEARHAGFLN 190 (302)
Q Consensus 170 ~lae~F~lMaRDEARHAGFlN 190 (302)
.+.++|..+-+| +-|+|+
T Consensus 89 ~~~~~F~~~D~d---~~G~i~ 106 (153)
T 3ox6_A 89 ELRDAFREFDTN---GDGEIS 106 (153)
T ss_dssp HHHHHHHHHCTT---CSSSBC
T ss_pred HHHHHHHHhCCC---CCCcCc
Confidence 467778766544 345543
No 90
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=59.39 E-value=13 Score=28.32 Aligned_cols=63 Identities=10% Similarity=0.233 Sum_probs=33.6
Q ss_pred ccCCcccccChhHHHHhhcC---------ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHh
Q 022114 112 DYNQTHFVRNKEFKEAADKM---------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIF 175 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l---------~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F 175 (302)
|.|..-++--+||...+..+ +++.-+..++-+.+.+-..=+|.|-|.|..+-++ .+|.+.++|
T Consensus 108 D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~-~~~~~~~~~ 179 (183)
T 1dgu_A 108 DFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS-RSPDFASSF 179 (183)
T ss_dssp CTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHHHHC-SSCHHHHCC
T ss_pred CCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH-hChHHHHhc
Confidence 55555566666665554432 2222222233344445555567777777777664 466665554
No 91
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=59.36 E-value=10 Score=31.29 Aligned_cols=99 Identities=13% Similarity=0.124 Sum_probs=51.9
Q ss_pred ChHHHhhhccccccccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHH
Q 022114 81 DFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKEL 160 (302)
Q Consensus 81 DFd~m~~lf~~eid~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl 160 (302)
+++++.+++..-.......++++.++..+ |.|..-.+--+||...+..+.......=+..+-+-+-..=+|.|-+.|+
T Consensus 110 ~~~ef~~~l~~~~~~~~~~~~~~~~f~~~--D~d~dG~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef 187 (256)
T 2jul_A 110 DEDTFKLIYSQFFPQGDATTYAHFLFNAF--DADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEM 187 (256)
T ss_dssp EHHHHHHHHHHHCCSSCCHHHHHHHHHHS--SCSCCSEECSHHHHHHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHH
T ss_pred CHHHHHHHHHHHcccCCcHHHHHHHHHHh--ccCCCCcCcHHHHHHHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 45555444332222344556777777765 5555556666777655544321111222333334556666777777777
Q ss_pred hhhhcc-----------------cChhHHHHhhccccc
Q 022114 161 GRRLKK-----------------TNPVVAEIFSLMSRD 181 (302)
Q Consensus 161 ~rrlk~-----------------~nP~lae~F~lMaRD 181 (302)
..=++. ....+.++|..+-+|
T Consensus 188 ~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d 225 (256)
T 2jul_A 188 LAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRN 225 (256)
T ss_dssp HHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCC
Confidence 654432 124566777666555
No 92
>2cih_A Ferritin heavy chain; apoferritin, ferroxidase, DI-iron non-heme protein, iron storage, iron, metal-binding, oxidoreductase, phosphorylation; 1.5A {Homo sapiens} PDB: 2chi_A 2cei_A 1fha_A 2fha_A 2cn7_A 2iu2_A 2clu_A 2cn6_A 3ajo_A 3ajq_A 3ajp_A 3erz_A 3es3_A 2z6m_A 1r03_A
Probab=59.24 E-value=17 Score=30.17 Aligned_cols=136 Identities=12% Similarity=0.030 Sum_probs=109.8
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc---ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccc
Q 022114 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTF 213 (302)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~---nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTf 213 (302)
+..++.|-+=...|+...-+|=-+++-..+. -|-+++.|.-.|-+|-.||--|=+-+.+.|-.+.|+-+.+-..-.|
T Consensus 15 ~~~~~~LN~qi~~El~As~~Yl~~a~~~~~~d~~l~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~~~~~ 94 (183)
T 2cih_A 15 QDSEAAINRQINLDLYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIQKPDCDDW 94 (183)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCCCcccc
Confidence 4567888888899999999999999988763 4999999999999999999999999999999999999887654445
Q ss_pred ccchhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhh-hhccccchhHHHHHHh
Q 022114 214 FKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENW-CQDENRHGDFFSALMK 275 (302)
Q Consensus 214 F~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~W-CqDEnRHGdfFa~lmr 275 (302)
=.|.=++=+.+=-||----+|-.++..-+++-|+. ..+|++.| -.++-.|-+-+.-++.
T Consensus 95 ~~~~e~le~aL~~Ek~v~~~l~~l~~~a~~~~D~~---t~~fLe~~fl~eq~e~~~~l~~~l~ 154 (183)
T 2cih_A 95 ESGLNAMECALHLEKNVNQSLLELHKLATDKNDPH---LCDFIETHYLNEQVKAIKELGDHVT 154 (183)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH---HHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777888999999999999999999988876654 44566644 4556667666665543
No 93
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=59.04 E-value=9.7 Score=28.17 Aligned_cols=88 Identities=15% Similarity=0.203 Sum_probs=48.4
Q ss_pred HHHHHHHHHhh-ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc------cChhHHH
Q 022114 101 EFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK------TNPVVAE 173 (302)
Q Consensus 101 E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~------~nP~lae 173 (302)
+.+.+.+-|+. |.|+.-.+--+||...+..+....-..-++-+.+.+-..=+|.|-|.|...-+.. ....+.+
T Consensus 26 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~ 105 (169)
T 3qrx_A 26 QKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILK 105 (169)
T ss_dssp HHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHHHHHH
Confidence 33333333332 6666667777777666655433222333444555555556777777776655432 1345677
Q ss_pred Hhhccccchhhhhhhhhh
Q 022114 174 IFSLMSRDEARHAGFLNK 191 (302)
Q Consensus 174 ~F~lMaRDEARHAGFlNk 191 (302)
+|..+-+| +-|+|+.
T Consensus 106 ~F~~~D~d---~~G~i~~ 120 (169)
T 3qrx_A 106 AFRLFDDD---NSGTITI 120 (169)
T ss_dssp HHHHHCTT---CSSSBCH
T ss_pred HHHHhCCC---CCCcCCH
Confidence 78776554 3555543
No 94
>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1
Probab=58.63 E-value=4.9 Score=31.66 Aligned_cols=58 Identities=22% Similarity=0.338 Sum_probs=46.4
Q ss_pred HHHHHHhhhhccccc-hhhHHHHhhhhcc-cChhHHHHhhccccchhhhhhhhhhhhccc
Q 022114 139 FVEFLERSCTAEFSG-FLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGFLNKGLSDF 196 (302)
Q Consensus 139 FidFLerScTaEFSG-flLyKEl~rrlk~-~nP~lae~F~lMaRDEARHAGFlNkal~Df 196 (302)
-.+-|+.+.-.|-.- --.|+++.+.-++ ..+.++++|..++.||.+|+..+.+.|...
T Consensus 81 ~~e~L~~al~~E~~~~~~~y~~~~~~A~~egd~~~~~~f~~i~~~E~~H~~~~~~~l~~i 140 (144)
T 1j30_A 81 LEQMIESAIAGETYEWTQMYPGFAKVAREEGFPEVAEWFETLARAEKSHAEKFQNVLKQL 140 (144)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346677777778777 4788877776543 389999999999999999999999988753
No 95
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=58.60 E-value=24 Score=27.33 Aligned_cols=81 Identities=22% Similarity=0.282 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhh-ccC--CcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC------hh
Q 022114 100 AEFEALLQEFKT-DYN--QTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN------PV 170 (302)
Q Consensus 100 ~E~~Aml~Efr~-DyN--r~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n------P~ 170 (302)
+|++.+.+-|.. |.| +.-.+--+||...+.. .+......++-+-+.+-..-+|.|-|.|...-+.... ..
T Consensus 34 ~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~ 112 (207)
T 2ehb_A 34 EEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEK 112 (207)
T ss_dssp HHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSCHHHH
T ss_pred HHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCCHHHH
Confidence 445545444442 555 7777777788776644 2222223444444555666789999998877665332 23
Q ss_pred HHHHhhccccc
Q 022114 171 VAEIFSLMSRD 181 (302)
Q Consensus 171 lae~F~lMaRD 181 (302)
+.++|..+-+|
T Consensus 113 l~~~F~~~D~d 123 (207)
T 2ehb_A 113 VKFAFKLYDLR 123 (207)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHhCCC
Confidence 77777766554
No 96
>3qz3_A Ferritin; structural genomics, the center for structural genomics of I diseases, csgid, cytoplasmic, oxidoreductase; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: a.25.1.1
Probab=58.20 E-value=17 Score=30.28 Aligned_cols=140 Identities=16% Similarity=0.191 Sum_probs=108.0
Q ss_pred HhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccc
Q 022114 127 AADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFL 205 (302)
Q Consensus 127 ~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfL 205 (302)
.|--+++ ..++-|-+-...|+...-.|--+++-..+. -|-++..|.-.|.+|-.||--|=+-+.+.|-.++|+-+
T Consensus 7 ~~~m~~~----~v~~~LN~qin~EL~as~~Yl~~a~~f~~~~l~g~a~~f~~~a~EE~~HA~~l~~~i~~~Gg~~~l~~i 82 (184)
T 3qz3_A 7 EFFMLSQ----AMVEHLNEQINLEFFSSNLYLQMSAWCEDKGFDGAAEFLRAHAVEEMQHMQRLFTYVSETGALPILGAI 82 (184)
T ss_dssp --CCSCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCB
T ss_pred CeeecCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcccCCC
Confidence 4444554 466777777888999888998888877644 58899999999999999999999999999999999999
Q ss_pred cccCccccccchhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHH
Q 022114 206 TKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALM 274 (302)
Q Consensus 206 tk~k~YTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lm 274 (302)
.+-+ -.+=.+.=++=+.+-.||.--..|-.++..-+++-|+.-. +|++..-+++-.|-+-+.-++
T Consensus 83 ~~p~-~~~~~~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~---~fLe~fl~EQve~~~~l~~~l 147 (184)
T 3qz3_A 83 AAPR-HDFASLGEVFRETYQHEQKITQQINKLAHVAFTSQDYSTF---NFLQWYVAEQHEEEKLFKGIL 147 (184)
T ss_dssp CCCC-CCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcc-cCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHhHH---HHHHHHHHHHHHHHHHHHHHH
Confidence 8876 3455677788888889999999999999999888776544 556633355566655555443
No 97
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=58.15 E-value=16 Score=26.90 Aligned_cols=70 Identities=20% Similarity=0.185 Sum_probs=33.9
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 022114 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (302)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (302)
...+..++++.++..+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-..|+.+-++
T Consensus 57 ~~~~~~~~~~~~~~~~--d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~ 126 (166)
T 2aao_A 57 GANLKESEILDLMQAA--DVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACE 126 (166)
T ss_dssp TCCCCHHHHHHHHHHH--CTTCCSSBCHHHHHHHHTTCHHHHTTHHHHHHHHHHCTTCSSSBCHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHh--CCCCCCeEcHHHHHHHHHHHhhcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 3444555666666655 344444455556655544432211111222222333445566776666666554
No 98
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=56.91 E-value=9.7 Score=27.17 Aligned_cols=84 Identities=18% Similarity=0.160 Sum_probs=47.4
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC-ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc-----
Q 022114 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT----- 167 (302)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~----- 167 (302)
...+..++++.++..+ |.|..-.+-=+||...+..+ .......-+.-+-+.+-..=+|.|-..|+.+-++.-
T Consensus 41 ~~~~~~~~~~~l~~~~--d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~ 118 (147)
T 4ds7_A 41 GLSPSEAEVADLMNEI--DVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLT 118 (147)
T ss_dssp TCCCCHHHHHHHHHHH--CTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC
T ss_pred CCCCCHHHHHHHHHHh--ccCCCCcCcHHHHHHHHHHhccCCCcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCC
Confidence 4556667777777776 55555556666775544322 111111222222244455668888888887766533
Q ss_pred ChhHHHHhhccc
Q 022114 168 NPVVAEIFSLMS 179 (302)
Q Consensus 168 nP~lae~F~lMa 179 (302)
...+.++|..+.
T Consensus 119 ~~~~~~~~~~~d 130 (147)
T 4ds7_A 119 DAEVDEMLREVS 130 (147)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhc
Confidence 245666777664
No 99
>2itb_A TRNA-(MS(2)IO(6)A)-hydroxylase, putative; putative ATTH, structural genomics, joint center for structu genomics, JCSG; 2.05A {Pseudomonas putida} SCOP: a.25.1.7
Probab=56.53 E-value=24 Score=31.51 Aligned_cols=111 Identities=17% Similarity=0.200 Sum_probs=74.7
Q ss_pred cccChHHHhhhccccccccccHHHH---HHHHHHHhhccCCcccccChhH-HHHhhcCChHHHHHHHHHHHhhhhccccc
Q 022114 78 YTTDFDEMETLFNTEINKKLNQAEF---EALLQEFKTDYNQTHFVRNKEF-KEAADKMQGPLRQIFVEFLERSCTAEFSG 153 (302)
Q Consensus 78 YTTDFd~m~~lf~~eid~~~~r~E~---~Aml~Efr~DyNr~HFvR~~eF-~~~~d~l~~~~r~~FidFLerScTaEFSG 153 (302)
|...-+=+++| ....+||+ +.+++-|++-.-.--=.+.+.+ ++....+....-..++|=|.=+-.=|--+
T Consensus 53 Yp~~~~Lv~~m------~~LarEEL~HFeqVl~im~~Rgi~l~~~~~~~Ya~~L~k~vr~~ep~~l~D~Llv~AlIEARS 126 (206)
T 2itb_A 53 YNTHLDLINMM------SRLAREELVHHEQVLRLMKRRGVPLRPVSAGRYASGLRRLVRAHEPVKLVDTLVVGAFIEARS 126 (206)
T ss_dssp TTTCHHHHHHH------HHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCSHHHHHHTTSCSSTTHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHH------HHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHHh
Confidence 34444445555 44566664 5677777765444434455566 44555665555577899887666677777
Q ss_pred hhhHHHHhhhhcccChhHHHHhhccccchhhhhh-hhhhhhcccc
Q 022114 154 FLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAG-FLNKGLSDFN 197 (302)
Q Consensus 154 flLyKEl~rrlk~~nP~lae~F~lMaRDEARHAG-FlNkal~Df~ 197 (302)
|==|+-|+-.+. .+ |++.+.-+-+.||||-+ ||.-|-.-++
T Consensus 127 CERF~lLa~~l~--d~-L~~FY~~Ll~SEArHy~~yl~LA~~y~~ 168 (206)
T 2itb_A 127 CERFAALVPHLD--EE-LGRFYHGLLKSEARHYQGYLKLAHNYGD 168 (206)
T ss_dssp HHHHHHHGGGSC--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhcCc--HH-HHHHHHHHHHHHhhHHHHHHHHHHHHcC
Confidence 778888999884 34 99999999999999975 6665554443
No 100
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=55.89 E-value=23 Score=26.77 Aligned_cols=63 Identities=19% Similarity=0.269 Sum_probs=34.9
Q ss_pred ccCCcccccChhHHHHhhc----------CChH--HHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHh
Q 022114 112 DYNQTHFVRNKEFKEAADK----------MQGP--LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIF 175 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~----------l~~~--~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F 175 (302)
|.|..-.+--+||...+.. ++.+ ....-++-+-+.+-..=+|.|-|.|+.+-+. ++|.+.++|
T Consensus 109 D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~-~~~~~~~~~ 183 (193)
T 1bjf_A 109 DLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAK-SDPSIVRLL 183 (193)
T ss_dssp CTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHH-HCTHHHHTT
T ss_pred CCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHh-cCHHHHHHh
Confidence 5555556666667554432 3321 1222333333444555677777777777664 566777666
No 101
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=55.81 E-value=12 Score=28.22 Aligned_cols=75 Identities=16% Similarity=0.173 Sum_probs=45.3
Q ss_pred ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhh
Q 022114 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNK 191 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNk 191 (302)
|.|..-.+--+||...+..+....-..-++-+.+.+ .=+|.|-|.|..+-+. ..+.+.++|..+-+| +-|.|+.
T Consensus 82 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~-~~~~~~~~F~~~D~d---~~G~i~~ 155 (167)
T 1gjy_A 82 DSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCV-KLRALTDSFRRRDSA---QQGMVNF 155 (167)
T ss_dssp CTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHH-HHHHHHHHHHHHCTT---CCSEEEE
T ss_pred CCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHH-HHHHHHHHHHHhCCC---CCeeEEe
Confidence 777777788888877766543221111222222333 4578888888877664 347788888877655 4566654
Q ss_pred h
Q 022114 192 G 192 (302)
Q Consensus 192 a 192 (302)
.
T Consensus 156 ~ 156 (167)
T 1gjy_A 156 S 156 (167)
T ss_dssp E
T ss_pred e
Confidence 3
No 102
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=55.76 E-value=6.3 Score=26.20 Aligned_cols=62 Identities=16% Similarity=0.213 Sum_probs=33.6
Q ss_pred HHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 022114 101 EFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (302)
Q Consensus 101 E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (302)
++..+...+ |.|+.-.+--+||...+..+. ..-..-++-+.+.+-..=+|.|-|.|...-+.
T Consensus 4 ~l~~~F~~~--D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~ 65 (78)
T 1k9u_A 4 DMERIFKRF--DTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCN 65 (78)
T ss_dssp HHHHHHHHH--CTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred HHHHHHHHH--CCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 444444444 555555555566654443322 11112244445555666688888888877665
No 103
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=55.70 E-value=30 Score=27.34 Aligned_cols=87 Identities=16% Similarity=0.263 Sum_probs=47.7
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHH------HHHHHHHhhhhccccchhhHHHHhhhhc--------
Q 022114 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQ------IFVEFLERSCTAEFSGFLLYKELGRRLK-------- 165 (302)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~------~FidFLerScTaEFSGflLyKEl~rrlk-------- 165 (302)
+++..+...+ |.|+.-.+--+||...+..+....-. ..++-|.+.+-..=+|.|-|.|...-+.
T Consensus 16 ~~l~~~F~~~--D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~ 93 (263)
T 2f33_A 16 SQFFEIWLHF--DADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEENFLLL 93 (263)
T ss_dssp HHHHHHHHHH--CTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSCTTHHHH
T ss_pred HHHHHHHHHh--CCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhhhhHHHH
Confidence 4555555554 55555666666666554433111111 2333344445555677777777765442
Q ss_pred ------ccChhHHHHhhccccchhhhhhhhhh
Q 022114 166 ------KTNPVVAEIFSLMSRDEARHAGFLNK 191 (302)
Q Consensus 166 ------~~nP~lae~F~lMaRDEARHAGFlNk 191 (302)
.....+.++|..+-+| +-|+|+.
T Consensus 94 ~~~~~~~~~~~l~~~F~~~D~d---~~G~i~~ 122 (263)
T 2f33_A 94 FRCQQLKSCEEFMKTWRKYDTD---HSGFIET 122 (263)
T ss_dssp HGGGTSSCHHHHHHHHTTSSTT---TCSSBCH
T ss_pred HHHhhccHHHHHHHHHHHHCCC---CCCCcCH
Confidence 2235678889887665 5566553
No 104
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=55.68 E-value=5.4 Score=30.10 Aligned_cols=26 Identities=8% Similarity=0.350 Sum_probs=22.0
Q ss_pred chhhHHhhccCCCCccccChHHHhhh
Q 022114 63 SNKTAIKETLLTPRFYTTDFDEMETL 88 (302)
Q Consensus 63 ~~k~a~~etlLtPRFYTTDFd~m~~l 88 (302)
.....+++.|-.|-||.+|++++..+
T Consensus 36 ~~i~~le~~ladp~~y~~d~~~~~~l 61 (89)
T 2lw1_A 36 AKLEALQTQVADASFFSQPHEQTQKV 61 (89)
T ss_dssp HHHHHHHHHHHSTTGGGSCHHHHHHH
T ss_pred HHHHHHHHHHhCcccccCCHHHHHHH
Confidence 34567888899999999999999886
No 105
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=55.44 E-value=9.5 Score=29.73 Aligned_cols=90 Identities=17% Similarity=0.183 Sum_probs=49.7
Q ss_pred ccHHHHHHHHHH-------Hh-hccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC
Q 022114 97 LNQAEFEALLQE-------FK-TDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN 168 (302)
Q Consensus 97 ~~r~E~~Aml~E-------fr-~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n 168 (302)
...+||.+++.. |+ -|.|+.-++--+||...+..+....-..-++-+.+.+ .=+|.|-|.|..+-+. ..
T Consensus 90 i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~-~~ 166 (198)
T 1juo_A 90 MGFNEFKELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCV-KL 166 (198)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHH-HH
T ss_pred ECHHHHHHHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHH-HH
Confidence 455566555433 22 2666666777777776665442221112222233333 4478888888777554 23
Q ss_pred hhHHHHhhccccchhhhhhhhhhh
Q 022114 169 PVVAEIFSLMSRDEARHAGFLNKG 192 (302)
Q Consensus 169 P~lae~F~lMaRDEARHAGFlNka 192 (302)
+.+.++|..+-+| +-|.|+..
T Consensus 167 ~~~~~~F~~~D~d---~~G~is~~ 187 (198)
T 1juo_A 167 RALTDSFRRRDTA---QQGVVNFP 187 (198)
T ss_dssp HHHHHHHHHTCTT---CCSEEEEE
T ss_pred HHHHHHHHHhCCC---CCCeEeec
Confidence 6677778777554 45666543
No 106
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=55.39 E-value=9.7 Score=27.91 Aligned_cols=15 Identities=27% Similarity=0.253 Sum_probs=7.3
Q ss_pred cccchhhHHHHhhhh
Q 022114 150 EFSGFLLYKELGRRL 164 (302)
Q Consensus 150 EFSGflLyKEl~rrl 164 (302)
.=+|.|-..|+.+=+
T Consensus 97 d~~G~I~~~el~~~l 111 (153)
T 2ovk_B 97 DGQGFIPEDYLKDLL 111 (153)
T ss_dssp SCSSCCCHHHHHHHH
T ss_pred CCCCeEcHHHHHHHH
Confidence 344555555554444
No 107
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=53.86 E-value=15 Score=27.57 Aligned_cols=75 Identities=17% Similarity=0.301 Sum_probs=48.7
Q ss_pred ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhh
Q 022114 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLN 190 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlN 190 (302)
|.|+.-.+--+||...+..+....-..-++-+.+.+-..=+|.|-|.|..+-+. ....+.++|..+-+| +-|+|.
T Consensus 84 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~-~~~~~~~~F~~~D~d---~dG~i~ 158 (172)
T 2znd_A 84 DRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI-VLQRLTDIFRRYDTD---QDGWIQ 158 (172)
T ss_dssp CTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH-HHHHHHHHHHHHCTT---SSSCCC
T ss_pred CCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HHHHHHHHHHHhCCC---CCCeEe
Confidence 777777787888877666553333333455555566666688888888777664 236777888877554 456664
No 108
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=52.54 E-value=15 Score=27.56 Aligned_cols=73 Identities=11% Similarity=0.104 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHhhccCCcccccChhHHHHhhcCC-hHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHH
Q 022114 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ-GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAE 173 (302)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~-~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae 173 (302)
.+++..+...| |.|..-++--+||...+..+. ...-..=++-+.+.+-..=+|.|-|.|..+-+++..|.+-+
T Consensus 39 ~~~l~~~F~~~--D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~ 112 (135)
T 3h4s_E 39 VSELCKGFSLL--ADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMME 112 (135)
T ss_dssp HHHHHHHHHHH--SBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHHHCSSCSSSBCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--CCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCHHHHH
Confidence 35555555555 777778888889988776554 12222234445555566668999999998888665555433
No 109
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=52.29 E-value=21 Score=26.85 Aligned_cols=65 Identities=15% Similarity=0.115 Sum_probs=29.8
Q ss_pred cHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 022114 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (302)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrl 164 (302)
..++++.++..+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+.+-+
T Consensus 54 ~~~~~~~~f~~~--D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~ 118 (183)
T 1s6c_A 54 ASTYAHYLFNAF--DTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIV 118 (183)
T ss_dssp CHHHHHHHHHHH--CTTCSSCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred hHHHHHHHHHHh--CCCCCCcEeHHHHHHHHHHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 344555555544 33333345555555444332111112222333344455566777777766554
No 110
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=51.94 E-value=15 Score=30.22 Aligned_cols=94 Identities=18% Similarity=0.300 Sum_probs=59.6
Q ss_pred ChHHHhhhccccccccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC-ChHHHHHHHHHHHhhhhccccchhhHHH
Q 022114 81 DFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-QGPLRQIFVEFLERSCTAEFSGFLLYKE 159 (302)
Q Consensus 81 DFd~m~~lf~~eid~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-~~~~r~~FidFLerScTaEFSGflLyKE 159 (302)
++..+.+. ....++|++.+...|..+ |+.-.+--+||...+..+ +.......++-+-+.+-..=+|.|-+.|
T Consensus 78 ~l~~l~~~------~~~s~~ei~~l~~~fd~~-~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~E 150 (256)
T 2jul_A 78 GLDQLQAQ------TKFTKKELQSLYRGFKNE-CPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFED 150 (256)
T ss_dssp HHHHHHHH------TTSCHHHHHHHHHHHHHH-CTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHH
T ss_pred HHHHHHHH------hCCCHHHHHHHHHHHHhh-CCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHH
Confidence 45555543 345667888888888865 566777778888776654 2222334455555556667788888888
Q ss_pred Hhhhhcc-----cChhHHHHhhccccc
Q 022114 160 LGRRLKK-----TNPVVAEIFSLMSRD 181 (302)
Q Consensus 160 l~rrlk~-----~nP~lae~F~lMaRD 181 (302)
+..-+.. ....+.++|..+-.|
T Consensus 151 f~~~l~~~~~~~~~~~l~~~F~~~D~d 177 (256)
T 2jul_A 151 FVVGLSILLRGTVHEKLKWAFNLYDIN 177 (256)
T ss_dssp HHHHHHHHHSCCHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHhccChHHHHHHHHHHhCCC
Confidence 7665432 234678888765544
No 111
>3bjd_A Putative 3-oxoacyl-(acyl-carrier-protein) synthas; structural genomics, APC5632, 3-oxoacyl-(acyl-carrier-protei synthase, PSI-2; HET: MSE; 1.85A {Pseudomonas aeruginosa PAO1}
Probab=51.77 E-value=7.7 Score=35.27 Aligned_cols=97 Identities=13% Similarity=0.155 Sum_probs=64.9
Q ss_pred cchhhhhhhhhhhhcccccccccccc---cccCccccccchhh--------hhhhhhccccchhhHHHHHHHhhhCCCCc
Q 022114 180 RDEARHAGFLNKGLSDFNYALDLGFL---TKARKYTFFKPKFI--------FYATYLSEKIGYWRYITIYRHLKANPEFQ 248 (302)
Q Consensus 180 RDEARHAGFlNkal~Df~l~lDLgfL---tk~k~YTfF~PkfI--------fYAtYLSEKIGYwRYItIyRHLe~~Pe~r 248 (302)
..|-.|....-+.|.++|++-+..-+ ...+.|+=+...++ +=+.+..|....|.|-.|-+.|++.+-
T Consensus 188 ~~e~~H~el~~~~l~~lGld~~~~~~~~~p~~~~~v~~~~~~~~~~~~~~alaal~~~E~~~p~~y~~i~~~l~~~g~-- 265 (332)
T 3bjd_A 188 DEKGSHPRLLAKLLEAIGLEADFQAVSTMPEEIAYLNNRARAFRHAEVGWGLAVFYITELVVPGNHEKLYRALLQAGL-- 265 (332)
T ss_dssp CGGGCHHHHHHHHHHHTTCCCCTTCCCCCHHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred CccccHHHHHHHHHHHcCCChhHhcccCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCC--
Confidence 45667888888999999988774221 11222333333332 223477789999999999999998542
Q ss_pred ccc-hhhhhHhhhhccccch-hHHHHHHhhCcc
Q 022114 249 CYP-IFKYFENWCQDENRHG-DFFSALMKAQPQ 279 (302)
Q Consensus 249 f~P-IFk~Fe~WCqDEnRHG-dfFa~lmraqP~ 279 (302)
-| -..||..|..=..+|| ..+..+|..-|.
T Consensus 266 -~~~~~~yf~~HI~lD~~H~~~~~~~ll~~~~~ 297 (332)
T 3bjd_A 266 -SEDQAEYYKVHISLVPPRAKREWQLIARRIPD 297 (332)
T ss_dssp -CTTTTHHHHHHHHHCC---CTTHHHHHTTTTC
T ss_pred -CcccchHHHHHHHHhHHHHHHHHHHHHHhCCC
Confidence 22 4589999998888999 888888877763
No 112
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=51.27 E-value=41 Score=25.02 Aligned_cols=74 Identities=14% Similarity=0.134 Sum_probs=45.1
Q ss_pred ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhh
Q 022114 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNK 191 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNk 191 (302)
|.|..-.+--+||...+..+....-..-++-+.+.+ .=+|.|-|.|..+-+. ..+.+.++|..+-+| +-|+|..
T Consensus 80 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~-~~~~~~~~F~~~D~d---~~G~i~~ 153 (165)
T 1k94_A 80 DQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCV-KLRALTDFFRKRDHL---QQGSANF 153 (165)
T ss_dssp CTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHH-HHHHHHHHHHTTCTT---CCSEEEE
T ss_pred CCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHH-HHHHHHHHHHHhCCC---CCCeEee
Confidence 777777888888877766542211111222222233 4578888888877664 337788888887655 4566543
No 113
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=51.07 E-value=13 Score=30.23 Aligned_cols=25 Identities=8% Similarity=0.107 Sum_probs=12.9
Q ss_pred ccchhhHHHHhhhhcccChhHHHHhh
Q 022114 151 FSGFLLYKELGRRLKKTNPVVAEIFS 176 (302)
Q Consensus 151 FSGflLyKEl~rrlk~~nP~lae~F~ 176 (302)
=+|.|-|.|..+-++ ++|.+.+.|+
T Consensus 199 ~dG~Is~~EF~~~~~-~~~~~~~~~~ 223 (229)
T 3dd4_A 199 KDGVVTIDEFIESCQ-KDENIMRSMQ 223 (229)
T ss_dssp CSSBCCHHHHHHHHH-TCHHHHHHHH
T ss_pred CCCcEeHHHHHHHHH-hCHHHHHHHH
Confidence 355555555555443 4555555554
No 114
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=50.68 E-value=19 Score=27.63 Aligned_cols=81 Identities=15% Similarity=0.217 Sum_probs=52.1
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccc
Q 022114 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMS 179 (302)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMa 179 (302)
+++..+...| |.|..-.+--+||...+..+....-..-++-+.+.+-..=+|.|-|.|...-+....+.+.++|..+-
T Consensus 48 ~~l~~~F~~~--D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~aF~~~D 125 (147)
T 1wy9_A 48 EAFKVKYMEF--DLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGKRSAILRMILMYE 125 (147)
T ss_dssp HHHHHHHTTS--CCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSSGGGGGGGGGGCC
T ss_pred HHHHHHHHHH--CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHhHHHHHHHHHHHc
Confidence 3444444433 77777788888888777665322222334444555556668999999988877655677888888776
Q ss_pred cch
Q 022114 180 RDE 182 (302)
Q Consensus 180 RDE 182 (302)
+|-
T Consensus 126 ~d~ 128 (147)
T 1wy9_A 126 EKN 128 (147)
T ss_dssp CC-
T ss_pred cCC
Confidence 653
No 115
>1tjo_A Iron-rich DPSA-homolog protein; ferritin, low-iron, metal binding protein; 1.60A {Halobacterium salinarum} SCOP: a.25.1.1 PDB: 1moj_A 1tk6_A 1tko_A 1tkp_A
Probab=50.43 E-value=67 Score=26.25 Aligned_cols=149 Identities=5% Similarity=-0.070 Sum_probs=108.4
Q ss_pred hcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-hhHHHHhhccccchhhhhhhhhhhhccccccccccc--c
Q 022114 129 DKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF--L 205 (302)
Q Consensus 129 d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf--L 205 (302)
..|+++.++.-++-|-.-...|++..+-|+--...++..+ ..+.+.|.-.+-+|..||-=|-.-+...|-..+... +
T Consensus 20 ~~l~~~~~~~vi~~LN~~La~~~~~~~~~~~~hw~v~G~~f~~lh~~~ee~~~e~~~haD~laERI~~LGg~P~~~~~~~ 99 (182)
T 1tjo_A 20 LRMDADRAEQCVDALNADLANVYVLYHQLKKHHWNVEGAEFRDLHLFLGEAAETAEEVADELAERVQALGGVPHASPETL 99 (182)
T ss_dssp TTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
Confidence 4578889999999999999999999999999999986553 568899999999999999999999999998888722 2
Q ss_pred ---cccCcc--ccccchhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHhhCccc
Q 022114 206 ---TKARKY--TFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQF 280 (302)
Q Consensus 206 ---tk~k~Y--TfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmraqP~l 280 (302)
+.-+.+ .+..++=++=...=.|+..=.+|=-+...-+..-+. .--+.++.+..++-.|-+++.+.+...|-.
T Consensus 100 ~~~s~i~e~~~~~~~~~e~l~~~l~~e~~~i~~~r~~i~~a~e~~D~---~T~dll~~~l~~~Ek~~w~L~a~l~~~~~~ 176 (182)
T 1tjo_A 100 QAEASVDVEDEDVYDIRTSLANDMAIYGDIIEATREHTELAENLGDH---ATAHMLREGLIELEDDAHHIEHYLEDDTLV 176 (182)
T ss_dssp HHHCCSCCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH---HHHHHHHHHHHHHHHHHHHHHHHTSSCCSC
T ss_pred HHhCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHCCCH---HHHHHHHHHHHHHHHHHHHHHHHhCCCcch
Confidence 211222 134566566555544544444444444444455454 445566777888999999999999865543
No 116
>1n1q_A DPS protein; four-helix bundle, unknown function; 2.20A {Brevibacillus brevis} SCOP: a.25.1.1
Probab=50.02 E-value=64 Score=24.85 Aligned_cols=138 Identities=8% Similarity=0.001 Sum_probs=103.2
Q ss_pred ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-hhHHHHhhccccchhhhhhhhhhhhccccccccccc------
Q 022114 132 QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF------ 204 (302)
Q Consensus 132 ~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf------ 204 (302)
..+.++..++-|-.-...|++..+.|+-..-.++..+ ..+++.|.-.+-+|..||-=|-+-+.+.|-..+++.
T Consensus 2 ~~~~~~~v~~~LN~~la~e~~~~~~~~~~hw~v~g~~f~~lh~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~ 81 (149)
T 1n1q_A 2 KTSIQQLVAVLLNRQVANWVVLYVKLHNFHWNVNGPNFFTLHEKFEELYTEASGHIDTLAERVLSIGGSPIATLAASLEE 81 (149)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHhccchheeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhH
Confidence 3467788899999999999999999999988886554 668999999999999999999999999999988875
Q ss_pred --ccccCccccccchhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHH
Q 022114 205 --LTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALM 274 (302)
Q Consensus 205 --Ltk~k~YTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lm 274 (302)
+.... -.+ .++=++=..+=.|+..=.+|=.+...-+..-+..-..++ +...+++-.|-.++.+.+
T Consensus 82 s~i~~~~-~~~-~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~~ll---~~~l~e~ek~~w~l~~~l 148 (149)
T 1n1q_A 82 ASIKEAT-GGE-SAAEMVSSVVNDFVDLVGELKVARDVADEADDEATADML---DAIEAGLEKHVWMLEAFL 148 (149)
T ss_dssp CCSCCCC-SCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCC-CCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH---HHHHHHHHHHHHHHHHhc
Confidence 33322 223 677777777777766655555555555555565555554 445566777877776654
No 117
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=49.96 E-value=13 Score=30.16 Aligned_cols=117 Identities=13% Similarity=0.075 Sum_probs=65.5
Q ss_pred ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhh-
Q 022114 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLN- 190 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlN- 190 (302)
|.|+.-.+--+||...+..+....-..-++-|.+.+-..=+|.|-|.|...-+.. -..+.++|..+-+| +-|+|+
T Consensus 61 D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~-~~~l~~~F~~~D~d---~~G~I~~ 136 (220)
T 3sjs_A 61 DRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKF-MELAYNLFVMNARA---RSGTLEP 136 (220)
T ss_dssp CTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH-HHHHHHHHHHHCCS---STTEECH
T ss_pred CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH-HHHHHHHHHHHCCC---CCCCCcH
Confidence 6667777777778766555432222334444555555566788888887765542 25678888877665 356554
Q ss_pred ----hhhcccccccccccccccCccccccchhhhhhhhhccccchhhHHHHHHHhh
Q 022114 191 ----KGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLK 242 (302)
Q Consensus 191 ----kal~Df~l~lDLgfLtk~k~YTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe 242 (302)
++|...|..++-.-+. ..+=...==..+|.|--|+.+...+.
T Consensus 137 ~El~~~l~~~g~~~~~~~~~----------~l~~~~dd~dg~I~~~eF~~~~~~l~ 182 (220)
T 3sjs_A 137 HEILPALQQLGFYINQRTSL----------LLHRLFARGMAFCDLNCWIAICAFAA 182 (220)
T ss_dssp HHHHHHHHHHTCCCCHHHHH----------HHHHHHC--CCSEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCHHHHH----------HHHHHhcCCCCcCcHHHHHHHHHHHH
Confidence 3566666544322111 01111111124677888877777664
No 118
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=49.93 E-value=26 Score=24.96 Aligned_cols=83 Identities=18% Similarity=0.067 Sum_probs=45.1
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCC--hHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc----
Q 022114 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ--GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---- 167 (302)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~--~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~---- 167 (302)
...+..++++.++.. |..--+--++|...+..+. ......-+.-+-+.+-..=+|.|-..|+.+=++..
T Consensus 35 ~~~~~~~~~~~~~~~-----~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~ 109 (145)
T 2bl0_B 35 GKNPTNAELNTIKGQ-----LNAKEFDLATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDAL 109 (145)
T ss_dssp TCCCCHHHHHHHHHH-----HTSSEECHHHHHHHHTSCCCCGGGGHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSSCC
T ss_pred CCCCCHHHHHHHHHh-----cCCCeEcHHHHHHHHHHHhhcCcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCCCC
Confidence 444556677777666 4444566667766655542 22222222222234455667888777777665432
Q ss_pred -ChhHHHHhhccccc
Q 022114 168 -NPVVAEIFSLMSRD 181 (302)
Q Consensus 168 -nP~lae~F~lMaRD 181 (302)
...+.++|..+-.|
T Consensus 110 ~~~~~~~~~~~~d~~ 124 (145)
T 2bl0_B 110 TSSEVEELMKEVSVS 124 (145)
T ss_dssp CHHHHHHHHTTCCCC
T ss_pred CHHHHHHHHHHcCCC
Confidence 23566777766554
No 119
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=49.82 E-value=33 Score=24.92 Aligned_cols=87 Identities=10% Similarity=0.105 Sum_probs=51.1
Q ss_pred HHHHHHHHHh-hc-cCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc----------ccC
Q 022114 101 EFEALLQEFK-TD-YNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK----------KTN 168 (302)
Q Consensus 101 E~~Aml~Efr-~D-yNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk----------~~n 168 (302)
++..+.+-|+ -| .|+.-.+--+||...+..+.......-++-|.+.+-..=+|.|-|.|...-+. ...
T Consensus 11 ~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~ 90 (158)
T 2jnf_A 11 QVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQ 90 (158)
T ss_dssp HHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCTTTTS
T ss_pred HHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccchhhHH
Confidence 3444444443 36 66666777777776665543222333455566666666788888888765543 234
Q ss_pred hhHHHHhhccccchhhhhhhhh
Q 022114 169 PVVAEIFSLMSRDEARHAGFLN 190 (302)
Q Consensus 169 P~lae~F~lMaRDEARHAGFlN 190 (302)
..+.++|..+-+| +-|+|+
T Consensus 91 ~~~~~~F~~~D~d---~~G~I~ 109 (158)
T 2jnf_A 91 QELREAFRLYDKE---GNGYIS 109 (158)
T ss_dssp STHHHHHHHHCSS---SSSSEE
T ss_pred HHHHHHHHHhCCC---CCCeEc
Confidence 5688888877654 345543
No 120
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=49.44 E-value=35 Score=27.66 Aligned_cols=96 Identities=14% Similarity=0.271 Sum_probs=61.7
Q ss_pred ccChHHHhhhccccccccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChH-HHHHHHHHHHhhhhccccchhhH
Q 022114 79 TTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGP-LRQIFVEFLERSCTAEFSGFLLY 157 (302)
Q Consensus 79 TTDFd~m~~lf~~eid~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~-~r~~FidFLerScTaEFSGflLy 157 (302)
..+++.+.+. ....++|++.+.+.|..+ |+.-.+--+||...+..+-+. .....++-+-+.+-..=+|.|-+
T Consensus 36 ~~~l~~l~~~------~~~s~~ei~~l~~~Fd~~-d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~ 108 (224)
T 1s1e_A 36 PEGLEQLEAQ------TNFTKRELQVLYRGFKNE-CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKF 108 (224)
T ss_dssp --CHHHHHHH------SSCCHHHHHHHHHHHHHH-CTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCH
T ss_pred HHHHHHHHHH------cCCCHHHHHHHHHHHHhh-CCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeH
Confidence 4556666664 345678999999999885 345567778998888766332 23344455555666777899988
Q ss_pred HHHhhhhcc-----cChhHHHHhhccccc
Q 022114 158 KELGRRLKK-----TNPVVAEIFSLMSRD 181 (302)
Q Consensus 158 KEl~rrlk~-----~nP~lae~F~lMaRD 181 (302)
.|...-+.. ....+.++|..+-.|
T Consensus 109 ~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d 137 (224)
T 1s1e_A 109 EDFVTALSILLRGTVHEKLRWTFNLYDIN 137 (224)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHccCCHHHHHHHHHHHHcCC
Confidence 888765532 123566677665444
No 121
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=48.96 E-value=45 Score=23.64 Aligned_cols=71 Identities=17% Similarity=0.056 Sum_probs=40.7
Q ss_pred cccccHHHHHHHHHHHhh-ccCCcccccChhHHHHhhcC---ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 022114 94 NKKLNQAEFEALLQEFKT-DYNQTHFVRNKEFKEAADKM---QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (302)
Q Consensus 94 d~~~~r~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l---~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (302)
...+..+++..++..+.. |.|. -.+-=++|...+..+ .+.....-+.-+-+.+-..-+|.|-..|+.+-++
T Consensus 38 ~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~ 112 (149)
T 2mys_C 38 GQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLA 112 (149)
T ss_pred CCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCceEcHHHHHHHHH
Confidence 445556788888887732 6666 566666776655543 1111111122222344556688888888877664
No 122
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=48.82 E-value=26 Score=29.49 Aligned_cols=132 Identities=19% Similarity=0.111 Sum_probs=87.4
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccc
Q 022114 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKP 216 (302)
Q Consensus 138 ~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~P 216 (302)
.-++-|......|+..--+|--+++..++. -|.++.+|.-.|.+|..||.-+=+.|. |-.+.++-.. ..-.+=.+
T Consensus 8 ~t~~~Ln~a~~~E~~A~~~Yl~~A~~a~~~G~~~iA~~f~~~A~eE~~HA~~~~~~l~--gg~~~i~~~~--p~~~~~s~ 83 (191)
T 1lko_A 8 RTEKNILTAFAGESQARNRYNYFGGQAKKDGFVQISDIFAETADQEREHAKRLFKFLE--GGDLEIVAAF--PAGIIADT 83 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHCC--SSCCCCCCCC--CCCCCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCccccCcC--CccccCCH
Confidence 366788888899999999999988887655 699999999999999999987777775 4333333211 11111223
Q ss_pred hhhhhhhhhccccch-hhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHhh
Q 022114 217 KFIFYATYLSEKIGY-WRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (302)
Q Consensus 217 kfIfYAtYLSEKIGY-wRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (302)
.=.+=+.+=-|..-+ -+|=.+...-+ +-.++.+.++|+.--.+|-+|.+-|..++..
T Consensus 84 ~e~l~~al~~E~~e~t~~y~~~~~~A~---eegd~~~~~~f~~~~~~E~ehe~~~~~~l~~ 141 (191)
T 1lko_A 84 HANLIASAAGEHHEYTEMYPSFARIAR---EEGYEEIARVFASIAVAEEFHEKRFLDFARN 141 (191)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHH---HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHH---HhCcHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334444444452211 12323333222 3345677788887889999999999988753
No 123
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=48.73 E-value=30 Score=28.08 Aligned_cols=67 Identities=16% Similarity=0.108 Sum_probs=39.1
Q ss_pred ccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 022114 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (302)
Q Consensus 97 ~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (302)
...++++.+++.+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+.+-++
T Consensus 86 ~~~~~~~~~f~~~--D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~ 152 (224)
T 1s1e_A 86 DASTYAHYLFNAF--DTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVK 152 (224)
T ss_dssp CCHHHHHHHHHHH--CTTCSSCBCHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHH
T ss_pred CcHHHHHHHHHHh--cCCCCCcEeHHHHHHHHHHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHH
Confidence 3445666666655 445555566677866655432211222233334455667789999999987664
No 124
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=47.34 E-value=23 Score=26.63 Aligned_cols=76 Identities=18% Similarity=0.239 Sum_probs=42.5
Q ss_pred ccCCcccccChhHHHHhhcC-----------ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc-----ChhHHHHh
Q 022114 112 DYNQTHFVRNKEFKEAADKM-----------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-----NPVVAEIF 175 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l-----------~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~-----nP~lae~F 175 (302)
|.|..-.+--+||...+..+ ....-...++-+.+.+-..=+|.|-|.|...-+... ...+.++|
T Consensus 50 D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F 129 (191)
T 3khe_A 50 DNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAF 129 (191)
T ss_dssp CTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHH
T ss_pred cCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcccchHHHHHHHH
Confidence 44555555555555544433 223334445556666666667888888776544221 23567777
Q ss_pred hccccchhhhhhhhh
Q 022114 176 SLMSRDEARHAGFLN 190 (302)
Q Consensus 176 ~lMaRDEARHAGFlN 190 (302)
..+-.| +-|+|+
T Consensus 130 ~~~D~d---~~G~I~ 141 (191)
T 3khe_A 130 QQFDSD---GSGKIT 141 (191)
T ss_dssp HHHCTT---CSSEEC
T ss_pred HHHCCC---CcCcCC
Confidence 776554 445554
No 125
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=47.28 E-value=29 Score=26.75 Aligned_cols=81 Identities=17% Similarity=0.418 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhh-ccCCcccccChhHHHHhhcCCh-HHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCh--hHHHHh
Q 022114 100 AEFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQG-PLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNP--VVAEIF 175 (302)
Q Consensus 100 ~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~-~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP--~lae~F 175 (302)
+|++.+-+-|+. |-|..-.+--.|+...+..|.. .+..++...+ ..+....+.--....+.+.++..++ .|.+.|
T Consensus 13 ~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~-~~~~~~i~f~ef~~~~~~~~~~~~~~~~l~~aF 91 (153)
T 3i5g_B 13 RQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAML-KECPGQLNFTAFLTLFGEKVSGTDPEDALRNAF 91 (153)
T ss_dssp HHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHH-HTSSSCCCSHHHHHTTTTTTTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHH-HhccCCccHHHHHHHHHhhhcccccHHHHHHHH
Confidence 333333333332 5555555666666555544321 1222333322 2222222222222334444443333 577788
Q ss_pred hccccc
Q 022114 176 SLMSRD 181 (302)
Q Consensus 176 ~lMaRD 181 (302)
...-+|
T Consensus 92 ~~fD~d 97 (153)
T 3i5g_B 92 SMFDED 97 (153)
T ss_dssp HTTCSS
T ss_pred hccccC
Confidence 766554
No 126
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=47.20 E-value=18 Score=27.36 Aligned_cols=17 Identities=12% Similarity=0.241 Sum_probs=9.0
Q ss_pred hccccchhhHHHHhhhh
Q 022114 148 TAEFSGFLLYKELGRRL 164 (302)
Q Consensus 148 TaEFSGflLyKEl~rrl 164 (302)
-..=+|.|-+.|+.+=+
T Consensus 109 D~d~~G~i~~~e~~~~l 125 (190)
T 1g8i_A 109 DLDNDGYITRNEMLDIV 125 (190)
T ss_dssp CTTCSSEEEHHHHHHHH
T ss_pred cCCCCCeECHHHHHHHH
Confidence 34445666666555443
No 127
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=46.94 E-value=34 Score=27.71 Aligned_cols=64 Identities=20% Similarity=0.152 Sum_probs=44.5
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 022114 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (302)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (302)
......++++.+++++ |.|..-.+-=+||...+..+ .+.+..|-.| -..=+|.|-..|+.+=++
T Consensus 81 g~~~~~~~~~~l~~~~--D~d~dg~I~~~EF~~~~~~~-~~l~~~F~~~-----D~d~~G~I~~~El~~~l~ 144 (220)
T 3sjs_A 81 GIRLSPQTALRMMRIF--DTDFNGHISFYEFMAMYKFM-ELAYNLFVMN-----ARARSGTLEPHEILPALQ 144 (220)
T ss_dssp GBCCCHHHHHHHHHHH--CTTCSSCBCHHHHHHHHHHH-HHHHHHHHHH-----CCSSTTEECHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHh--CCCCCCcCCHHHHHHHHHHH-HHHHHHHHHH-----CCCCCCCCcHHHHHHHHH
Confidence 4556677888888887 55555566667887766654 4566666544 556789999999887664
No 128
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=46.88 E-value=33 Score=25.33 Aligned_cols=33 Identities=9% Similarity=0.087 Sum_probs=17.2
Q ss_pred hccccchhhHHHHhhhhccc-----ChhHHHHhhcccc
Q 022114 148 TAEFSGFLLYKELGRRLKKT-----NPVVAEIFSLMSR 180 (302)
Q Consensus 148 TaEFSGflLyKEl~rrlk~~-----nP~lae~F~lMaR 180 (302)
-..-+|+|-..|+.+=++.- ...+.++|..+-.
T Consensus 105 D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~ 142 (166)
T 2mys_B 105 DPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPP 142 (166)
T ss_pred CCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCC
Confidence 44556666666666555322 2345555555433
No 129
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=46.85 E-value=39 Score=26.01 Aligned_cols=64 Identities=16% Similarity=0.188 Sum_probs=40.1
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 022114 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (302)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (302)
++++.++..+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+.+=++
T Consensus 52 ~~~~~~f~~~--D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~ 115 (198)
T 2r2i_A 52 KYVEQMFETF--DFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIK 115 (198)
T ss_dssp HHHHHHHHHH--CTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred HHHHHHHHHH--CCCCCCeEcHHHHHHHHHHHccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence 4577777776 555555677778876665443222222333444555677789999999887664
No 130
>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}
Probab=46.73 E-value=13 Score=27.84 Aligned_cols=61 Identities=20% Similarity=0.200 Sum_probs=46.2
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcc-cChhHHHHhhccccchhhhhhhhhhhhcccccc
Q 022114 139 FVEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYA 199 (302)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~-~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~ 199 (302)
-.+-|+.....|-...-.|+++.+...+ ..|..++++.-+..||-+|+-+|...|.+.+..
T Consensus 86 ~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~~~~~ 147 (149)
T 2qqy_A 86 VREMLEYARQSEYETIKRYEKRKEQAANLNMTELVVKLEDMIADETNHMEELDRLLNDKAMV 147 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 3455666777788788889998876543 579999999999999999999999999876543
No 131
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=46.41 E-value=23 Score=25.18 Aligned_cols=79 Identities=13% Similarity=0.182 Sum_probs=49.3
Q ss_pred HHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc------cChhHHHH
Q 022114 101 EFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK------TNPVVAEI 174 (302)
Q Consensus 101 E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~------~nP~lae~ 174 (302)
++..+...+ |.|+.-.+--+||...+..+....-..-++-|.+.+...-+|.|-|.|...-+.. ....+.++
T Consensus 12 ~l~~~F~~~--D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~ 89 (147)
T 4ds7_A 12 EFKEAFALF--DKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEA 89 (147)
T ss_dssp HHHHHHHHH--CTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHH--CCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHHHHHHH
Confidence 344444433 6777777777888777666543334444666667777778899998887654432 12456677
Q ss_pred hhccccc
Q 022114 175 FSLMSRD 181 (302)
Q Consensus 175 F~lMaRD 181 (302)
|..+-+|
T Consensus 90 F~~~D~d 96 (147)
T 4ds7_A 90 FKVFDKN 96 (147)
T ss_dssp HHHHCTT
T ss_pred HHHhCCC
Confidence 7766444
No 132
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=46.19 E-value=40 Score=22.55 Aligned_cols=65 Identities=17% Similarity=0.254 Sum_probs=41.9
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc
Q 022114 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (302)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~ 167 (302)
+++..+...+ |.|+.-.+--+||...+..+. ..-..-++-+.+.+-..=+|.|-|.|...-++..
T Consensus 11 ~~l~~~F~~~--D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 75 (86)
T 2opo_A 11 ADRERIFKRF--DTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 75 (86)
T ss_dssp HHHHHHHHHH--CTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred HHHHHHHHHH--CCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence 4444454444 777777788888877776654 2223335555566666668999999888776543
No 133
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=45.62 E-value=35 Score=25.01 Aligned_cols=65 Identities=18% Similarity=0.263 Sum_probs=41.7
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC------ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 022114 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (302)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l------~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (302)
...+..++++.|+.++ |.|..-.+-=+||...+... ..+.++.|--| -..=+|+|-..|+.+=++
T Consensus 36 g~~~~~~~~~~~~~~~--d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~-----D~d~~G~I~~~el~~~l~ 106 (143)
T 2obh_A 36 GFEPKKEEIKKMISEI--DKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLF-----DDDETGKISFKNLKRVAK 106 (143)
T ss_dssp TCCCCHHHHHHHHHHH--TTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CTTCSSSBCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHh--CCCCCCeeeHHHHHHHHHHHhccccHHHHHHHHHHHh-----CCCCCCcCcHHHHHHHHH
Confidence 4556677888888887 55555566667786544322 12345555433 556689999999887654
No 134
>1jk0_A RNR Y2, ribonucleoside-diphosphate reductase small chain 1; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1smq_A
Probab=45.60 E-value=30 Score=33.09 Aligned_cols=143 Identities=14% Similarity=0.121 Sum_probs=76.8
Q ss_pred HHhh-cCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc--cChhHHHHhhccccchhhhhhhhhhhhcccc-----
Q 022114 126 EAAD-KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK--TNPVVAEIFSLMSRDEARHAGFLNKGLSDFN----- 197 (302)
Q Consensus 126 ~~~d-~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~--~nP~lae~F~lMaRDEARHAGFlNkal~Df~----- 197 (302)
.+|. .|+++.|..+.-=|--=..++ |.+ -..|.-++.. ..|++.-++...+=.|++|+-.-..-+.-++
T Consensus 140 ~dw~~~Lt~~Er~~~~~vLa~fa~~D--siv-~~nl~~~l~~~v~~pE~~~~~~~Q~~~EaIHsesYS~il~tl~~d~~e 216 (419)
T 1jk0_A 140 HDWNNRMNENERFFISRVLAFFAASD--GIV-NENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPKE 216 (419)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHTTS--SHH-HHHHCCCCCTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHH--HHH-HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 5777 999998886654332212222 111 1222223322 4799998888888889999876555554433
Q ss_pred ------cccccccccccCc----------cccccchhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhh
Q 022114 198 ------YALDLGFLTKARK----------YTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQ 261 (302)
Q Consensus 198 ------l~lDLgfLtk~k~----------YTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCq 261 (302)
-..+...|.++-+ -++.+ +.|-| ++-|.|=|-=+.++.-.|.++. ..-=+=+=.+-=+.
T Consensus 217 ~~~iF~~i~~~p~L~~Ka~~i~~~~~~~~~~~~~-~lva~--~~lEGI~fsg~Fa~~~~l~~rg--~MpG~~~~i~lI~R 291 (419)
T 1jk0_A 217 SEFLFNAIHTIPEIGEKAEWALRWIQDADALFGE-RLVAF--ASIEGVFFSGSFASIFWLKKRG--MMPGLTFSNELICR 291 (419)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTTSSSCCHHH-HHHHH--HHHHHTTTHHHHHHHHHHHHTT--CCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHhccchhHHH-HHHHH--HHHHHHHHHHHHHHHHHHHHcC--CCccHHHHHHHHHH
Confidence 2233444432211 11221 22333 4557776544444223555542 22222233444568
Q ss_pred ccccchhHHHHHHhh
Q 022114 262 DENRHGDFFSALMKA 276 (302)
Q Consensus 262 DEnRHGdfFa~lmra 276 (302)
||.+||+|...+++.
T Consensus 292 DE~lH~~f~~~l~~~ 306 (419)
T 1jk0_A 292 DEGLHTDFACLLFAH 306 (419)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988773
No 135
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=45.58 E-value=3.8 Score=34.22 Aligned_cols=23 Identities=30% Similarity=0.743 Sum_probs=20.2
Q ss_pred cchhhHHHHHHHhhhCCCCcccc
Q 022114 229 IGYWRYITIYRHLKANPEFQCYP 251 (302)
Q Consensus 229 IGYwRYItIyRHLe~~Pe~rf~P 251 (302)
|-|.||++++-.|.+|||++=..
T Consensus 63 ilymRy~~L~~kIpkHpdyk~~~ 85 (144)
T 2a9u_A 63 VLYMKYVTVYNLIKKRPDFKQQQ 85 (144)
T ss_dssp HHHHHHHHHHHHHTTSHHHHHTH
T ss_pred HHHHHHHHHHHHHhcCcchhhhh
Confidence 78999999999999999987543
No 136
>3uno_A Probable bacterioferritin BFRB; ferroxidase activity, iron storage, oxidoreductase; 2.50A {Mycobacterium tuberculosis} PDB: 3oj5_A 3qd8_A
Probab=45.31 E-value=34 Score=28.82 Aligned_cols=135 Identities=14% Similarity=0.192 Sum_probs=107.6
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccc
Q 022114 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (302)
Q Consensus 137 ~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~ 215 (302)
+..++-|-+=...|+.-.-.|--+++-.++. -|-+++.|.-.|-+|-.||--|=+-+.+.|-.++|+-+.+- .-.|=.
T Consensus 9 ~~v~~~LN~qi~~El~As~~Yl~~a~~f~~~~l~g~a~~f~~~A~EE~~HA~~l~~~i~~rGG~~~l~~i~~p-~~~~~s 87 (189)
T 3uno_A 9 TKFHALMQEQIHNEFTAAQQYVAIAVYFDSEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTV-RNQFDR 87 (189)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCC-CCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCC-CccchH
Confidence 4577888888888988888888888766544 58899999999999999999998999999999999888766 344556
Q ss_pred chhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHh
Q 022114 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMK 275 (302)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmr 275 (302)
+.=++=+.+--||.---.|--++..-+++-|+... ++++..-++|-.|-+-+.-++.
T Consensus 88 ~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~---~fLe~fL~EQve~~~~l~~~l~ 144 (189)
T 3uno_A 88 PREALALALDQERTVTDQVGRLTAVARDEGDFLGE---QFMQWFLQEQIEEVALMATLVR 144 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 77788888888999888999999998888776554 5555334677888777776554
No 137
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=45.23 E-value=34 Score=27.02 Aligned_cols=64 Identities=19% Similarity=0.184 Sum_probs=40.1
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 022114 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (302)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (302)
++++.+++.+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+.+-++
T Consensus 57 ~~~~~~f~~~--D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~ 120 (211)
T 2ggz_A 57 KHIDQVYNTF--DTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFM 120 (211)
T ss_dssp HHHHHHHHHH--CTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHH--cCCCCCeEeHHHHHHHHHHhccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence 4577777766 556666677778876655432222222333444556677799999999987664
No 138
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=44.51 E-value=20 Score=27.13 Aligned_cols=85 Identities=14% Similarity=0.195 Sum_probs=48.4
Q ss_pred cccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC-ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc-----cCh
Q 022114 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----TNP 169 (302)
Q Consensus 96 ~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~-----~nP 169 (302)
...++|+..+.+.|..| |+...+--+||...+..+ +.......++-+-+.+-..=+|.|-+.|+..-+.. ...
T Consensus 21 ~~~~~~i~~~~~~fd~~-~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~ 99 (190)
T 1fpw_A 21 YFDRREIQQWHKGFLRD-CPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEE 99 (190)
T ss_dssp CSTHHHHHHHHHHHHHH-CTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTH
T ss_pred CCCHHHHHHHHHHHHHH-CCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCcHH
Confidence 44566777777777776 455566667776665543 10011122333444455566888888887765432 234
Q ss_pred hHHHHhhccccc
Q 022114 170 VVAEIFSLMSRD 181 (302)
Q Consensus 170 ~lae~F~lMaRD 181 (302)
.+.++|..+-+|
T Consensus 100 ~~~~~f~~~D~d 111 (190)
T 1fpw_A 100 KLSWAFELYDLN 111 (190)
T ss_dssp HHHHHHHHHCSS
T ss_pred HHHHHHHHhcCC
Confidence 566667665444
No 139
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=44.46 E-value=25 Score=26.27 Aligned_cols=16 Identities=19% Similarity=0.331 Sum_probs=7.1
Q ss_pred ccccchhhHHHHhhhh
Q 022114 149 AEFSGFLLYKELGRRL 164 (302)
Q Consensus 149 aEFSGflLyKEl~rrl 164 (302)
..=+|.|-..|+.+-+
T Consensus 95 ~d~~G~I~~~E~~~~l 110 (179)
T 2f2o_A 95 KDGNGYISAAELRHVM 110 (179)
T ss_dssp TTCSSEECHHHHHHHH
T ss_pred CCCCCcCcHHHHHHHH
Confidence 3344444444444433
No 140
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=44.05 E-value=20 Score=26.07 Aligned_cols=81 Identities=19% Similarity=0.319 Sum_probs=53.7
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC------ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc-
Q 022114 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK- 166 (302)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l------~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~- 166 (302)
.+.+..++++.++..+ |.|..-.+-=+||...+... ..+.+..| +.+-..=+|.|-..|+.+=++.
T Consensus 53 ~~~~~~~~~~~l~~~~--d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F-----~~~D~d~~G~i~~~el~~~l~~~ 125 (161)
T 3fwb_A 53 GFELPKREILDLIDEY--DSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAF-----QLFDDDHTGKISIKNLRRVAKEL 125 (161)
T ss_dssp TCCCCHHHHHHHHHHH--CTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHHHH-----HHHCTTCSSEECHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHh--CcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHHHH-----HHHcCCCCCeEeHHHHHHHHHHh
Confidence 5667778899998887 44555556667786555432 22334444 3446677899999998886653
Q ss_pred ----cChhHHHHhhccccc
Q 022114 167 ----TNPVVAEIFSLMSRD 181 (302)
Q Consensus 167 ----~nP~lae~F~lMaRD 181 (302)
....+.++|..+..|
T Consensus 126 ~~~~~~~~~~~~~~~~d~~ 144 (161)
T 3fwb_A 126 GETLTDEELRAMIEEFDLD 144 (161)
T ss_dssp TCCCCHHHHHHHHHTTCSS
T ss_pred CCCCCHHHHHHHHHHhCCC
Confidence 345688888887665
No 141
>2clb_A DPS-like protein; DI-iron carboxylate, hypothetical protein, bacterioferritin, hydrogen peroxide, metal binding protein, archaea; 2.4A {Sulfolobus solfataricus}
Probab=43.81 E-value=30 Score=28.71 Aligned_cols=140 Identities=16% Similarity=0.246 Sum_probs=106.2
Q ss_pred HHHHHHHHHhhhhccccchhhHHHHhhhhcccC-hhHHHHhhccccchhhhhhhhhhhhccccccccccc-----ccccC
Q 022114 136 RQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF-----LTKAR 209 (302)
Q Consensus 136 r~~FidFLerScTaEFSGflLyKEl~rrlk~~n-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf-----Ltk~k 209 (302)
++.-++-|-.-...|++..+.|+-....++..+ ..+.+.|.-.+-+|..||--|-.-+...|-..+.+. ++.-+
T Consensus 23 ~~~v~~~LN~~La~e~~~~~~y~~~hw~v~G~~f~~lh~~f~~~~~ee~~haD~iaERI~~LGg~p~~~~~~~~~~s~I~ 102 (188)
T 2clb_A 23 IKKLVDKLVKATAAEFTTYYYYTILRMHLTGMEGEGLKEIAEDARLEDRLHFELMTQRIYELGGGLPRDIRQLADISACS 102 (188)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHhccCC
Confidence 566789999999999999999999999885542 569999999999999999999999999999988654 33322
Q ss_pred -c---cccccchhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHhhCcc
Q 022114 210 -K---YTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQ 279 (302)
Q Consensus 210 -~---YTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmraqP~ 279 (302)
. -.+..++=++=+.+=.|+.-=.+|=.+...-+.. |+.-..++ +....++-.|-+.|..++...|.
T Consensus 103 ~e~~~~~~~~~~e~l~~~l~~e~~v~~~~~~~i~~A~e~-D~~T~dlL---~~~l~e~ee~~~~l~~~L~~~~~ 172 (188)
T 2clb_A 103 DAYLPENWKDPKEILKVLLEAEQCAIRTWKEVCDMTYGK-DPRTYDLA---QRILQEEIEHEAWFLELLYGRPS 172 (188)
T ss_dssp CCCCCTTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CHHHHHHH---HHHHHHHHHHHHHHHHHHSCCCC
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHH---HHHHHHHHHHHHHHHHHhccCCC
Confidence 2 2345677777777766666655665666666666 66655555 44556677799999999987654
No 142
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=43.77 E-value=20 Score=26.19 Aligned_cols=53 Identities=13% Similarity=0.273 Sum_probs=21.3
Q ss_pred ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhh--hhccccchhhHHHHhhhh
Q 022114 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERS--CTAEFSGFLLYKELGRRL 164 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerS--cTaEFSGflLyKEl~rrl 164 (302)
|.|+.-++--+||...+..+....-..-++-+.+. +-..=+|.|-|.|..+-+
T Consensus 94 D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~ 148 (156)
T 1wdc_C 94 DREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKV 148 (156)
T ss_dssp CSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHH
Confidence 44444444445554444433211111122222333 333335555555554444
No 143
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=43.39 E-value=60 Score=25.73 Aligned_cols=88 Identities=20% Similarity=0.338 Sum_probs=55.0
Q ss_pred cHHHHHHHHHHHhhccCCcccccChhHHHHhh----------cCChHHHHHHHHHHHhhhhccccchhhHHHHhhhh---
Q 022114 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAAD----------KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL--- 164 (302)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d----------~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrl--- 164 (302)
..+++..+...| |.|..-.+--+||...+. .++++.-+.+++-+.+.+-..=+|.|-|.|...-+
T Consensus 9 ~~~~l~~~F~~~--D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~ 86 (272)
T 2be4_A 9 DAAGFLQIWQHF--DADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMILPQ 86 (272)
T ss_dssp CHHHHHHHHHHH--CTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHHSCH
T ss_pred CHHHHHHHHHHh--cCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHHhhh
Confidence 345677777766 667777788888877655 44554444444444455556667888888876652
Q ss_pred -------------cccChhHHHHhhccccchhhhhhhhh
Q 022114 165 -------------KKTNPVVAEIFSLMSRDEARHAGFLN 190 (302)
Q Consensus 165 -------------k~~nP~lae~F~lMaRDEARHAGFlN 190 (302)
......+.++|..+-+| +-|.|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d---~~G~i~ 122 (272)
T 2be4_A 87 EENFLLIFRREAPLDNSVEFMKIWRKYDAD---SSGYIS 122 (272)
T ss_dssp HHHHHHHHHHHSCCCCHHHHHHHHHHHCTT---CCSEEE
T ss_pred hHHHHHHHhhccCcccHHHHHHHHHHhCCC---CCCccC
Confidence 22345677888877554 355554
No 144
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=43.16 E-value=26 Score=27.41 Aligned_cols=33 Identities=9% Similarity=-0.217 Sum_probs=18.4
Q ss_pred hccccchhhHHHHhhhhccc-----ChhHHHHhhccccc
Q 022114 148 TAEFSGFLLYKELGRRLKKT-----NPVVAEIFSLMSRD 181 (302)
Q Consensus 148 TaEFSGflLyKEl~rrlk~~-----nP~lae~F~lMaRD 181 (302)
-..=+|+|-..|+.+=+ .- ...+.++|..+-.|
T Consensus 136 D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d 173 (196)
T 3dtp_E 136 DEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPID 173 (196)
T ss_dssp CSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEE
T ss_pred CCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCC
Confidence 44556777666666655 32 23456666665544
No 145
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=42.90 E-value=56 Score=24.65 Aligned_cols=63 Identities=14% Similarity=0.086 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 022114 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (302)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrl 164 (302)
++++.++..+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+..=+
T Consensus 63 ~~~~~~f~~~--D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~ 125 (193)
T 1bjf_A 63 KFAEHVFRTF--DANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIV 125 (193)
T ss_dssp HHHHHHHHHH--CSSCSSEEEHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred HHHHHHHHHh--CCCCCCcCcHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHH
Confidence 4455555554 44555556666776555443222222223333345566668888888877644
No 146
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=42.69 E-value=52 Score=25.49 Aligned_cols=93 Identities=16% Similarity=0.160 Sum_probs=59.8
Q ss_pred ccHHHHHHHHHH-------Hh-hccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC
Q 022114 97 LNQAEFEALLQE-------FK-TDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN 168 (302)
Q Consensus 97 ~~r~E~~Aml~E-------fr-~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n 168 (302)
...+||.+++.. |+ -|.|+.-++--+||...+..+....-..-++-+.+.+-.-=+|.|-|.|..+-+. ..
T Consensus 80 I~~~EF~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~-~~ 158 (191)
T 1y1x_A 80 ITFDEFKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSI-FV 158 (191)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH-HH
T ss_pred EcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH-HH
Confidence 455666655432 11 2778888888899988877653332233344455555556689999999988775 35
Q ss_pred hhHHHHhhccccchhhhhhhhhhhh
Q 022114 169 PVVAEIFSLMSRDEARHAGFLNKGL 193 (302)
Q Consensus 169 P~lae~F~lMaRDEARHAGFlNkal 193 (302)
+.+.++|..+-+| +-|.|+-..
T Consensus 159 ~~~~~~F~~~D~d---~dG~i~~~~ 180 (191)
T 1y1x_A 159 CRVRNVFAFYDRE---RTGQVTFTF 180 (191)
T ss_dssp HHHHHHHHHHCTT---CCSEEEEEH
T ss_pred HHHHHHHHHhCcC---CCceEEeeH
Confidence 7888888887555 345544333
No 147
>4g5o_E G-protein-signaling modulator 2; galphai, goloco, galpha signaling, asymmetric cell division, cycle-signaling protein complex; HET: GDP CIT; 2.90A {Mus musculus} PDB: 4g5q_E* 4g5r_E*
Probab=42.39 E-value=6.1 Score=25.25 Aligned_cols=16 Identities=31% Similarity=0.721 Sum_probs=12.9
Q ss_pred hhHHHHHHhhCccchh
Q 022114 267 GDFFSALMKAQPQFLN 282 (302)
Q Consensus 267 GdfFa~lmraqP~ll~ 282 (302)
-|||++++|+|.+-..
T Consensus 2 edffslilrsqakrmd 17 (26)
T 4g5o_E 2 EDFFSLILRSQAKRMD 17 (26)
T ss_dssp CCHHHHHHHHHHCSCG
T ss_pred chHHHHHHHHHHHhhh
Confidence 3899999999876544
No 148
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=41.89 E-value=32 Score=26.94 Aligned_cols=83 Identities=12% Similarity=0.234 Sum_probs=46.7
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc------cChhHHH
Q 022114 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK------TNPVVAE 173 (302)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~------~nP~lae 173 (302)
.+|..+...| |.|..-.+--.+|...+..+....-..-+.-|.+.+ +|.|-|.|...-+.. ....+..
T Consensus 57 ~~l~~~F~~~--D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~~~~l~~ 130 (196)
T 3dtp_E 57 QEFKEAFQLI--DQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTDEEDVIVN 130 (196)
T ss_dssp HHHHHHHHHH--CCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSCCHHHHHH
T ss_pred HHHHHHHHHH--CCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCCcHHHHHH
Confidence 3444444444 666666677777766666542221122222233333 899998887665432 1246888
Q ss_pred Hhhccccchhhhhhhhhh
Q 022114 174 IFSLMSRDEARHAGFLNK 191 (302)
Q Consensus 174 ~F~lMaRDEARHAGFlNk 191 (302)
+|..+-+| +-|+|+.
T Consensus 131 ~F~~~D~d---~~G~Is~ 145 (196)
T 3dtp_E 131 AFNLFDEG---DGKCKEE 145 (196)
T ss_dssp HHHTTCSS---SSCCBHH
T ss_pred HHHHHCCC---CCCcCcH
Confidence 89887665 4566653
No 149
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=41.20 E-value=9.9 Score=31.34 Aligned_cols=23 Identities=26% Similarity=0.557 Sum_probs=19.4
Q ss_pred cchhhHHHHH-HHhhhCCCCcccc
Q 022114 229 IGYWRYITIY-RHLKANPEFQCYP 251 (302)
Q Consensus 229 IGYwRYItIy-RHLe~~Pe~rf~P 251 (302)
|-|.||++|+ ..|-+|||++-..
T Consensus 61 ily~R~~~L~~e~IpkHpdy~~~~ 84 (146)
T 2xze_A 61 ILYNKYITLFIEKLPKHRDYKSAV 84 (146)
T ss_dssp HHHHHHHHHHHTTGGGSTTTTTCC
T ss_pred HHHHHHHHHHHHHcccCccchhhh
Confidence 5689999999 6999999997543
No 150
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=41.14 E-value=41 Score=24.85 Aligned_cols=72 Identities=17% Similarity=0.256 Sum_probs=37.2
Q ss_pred ccCCcccccChhHHHHhhcCCh--HHHHHHHHHHHhhhhccccchhhHHHHhhhhcc------cChhHHHHhhccccchh
Q 022114 112 DYNQTHFVRNKEFKEAADKMQG--PLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK------TNPVVAEIFSLMSRDEA 183 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~--~~r~~FidFLerScTaEFSGflLyKEl~rrlk~------~nP~lae~F~lMaRDEA 183 (302)
|.|..-.+--+||...+..+.. ........ |.+ +.+|.|-|.|...-+.. ....+.++|..+-+|
T Consensus 35 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~-l~~----~~dg~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d-- 107 (166)
T 2mys_B 35 DQNADGIIDKDDLRETFAAMGRLNVKNEELDA-MIK----EASGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPD-- 107 (166)
T ss_pred CCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHH-HHH----HCCCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCC--
Confidence 4555555555666555443321 11122222 222 23788888877654432 224678888877665
Q ss_pred hhhhhhhh
Q 022114 184 RHAGFLNK 191 (302)
Q Consensus 184 RHAGFlNk 191 (302)
+-|+|+.
T Consensus 108 -~~G~I~~ 114 (166)
T 2mys_B 108 -GKGSIKK 114 (166)
T ss_pred -CCcceeH
Confidence 4566553
No 151
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=40.38 E-value=27 Score=23.15 Aligned_cols=67 Identities=22% Similarity=0.250 Sum_probs=40.9
Q ss_pred cHHHHHHHHHHHhhccCCcccccChhHHHHhhcCC-hHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc
Q 022114 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ-GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (302)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~-~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~ 167 (302)
.++++. +...| |.|..-++--+||...+..+. ...-..-++-+.+.+-..=+|.|-|.|...-+...
T Consensus 7 ~~~~l~-~F~~~--D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 74 (81)
T 1c7v_A 7 EEEILR-AFKVF--DANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKS 74 (81)
T ss_dssp CHHHHH-HHHHH--SCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC
T ss_pred HHHHHH-HHHHH--CCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhh
Confidence 345666 66655 666666777777877766554 32223334445555555667888888877766543
No 152
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=40.01 E-value=15 Score=36.13 Aligned_cols=102 Identities=18% Similarity=0.205 Sum_probs=45.9
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC--ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc----
Q 022114 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM--QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---- 167 (302)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l--~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~---- 167 (302)
......+|++.|+.++- .|..-.+--+||...+..+ .++.+++|-.|= .. +|++-+.||.+=+++.
T Consensus 41 g~~~s~~el~~lf~~~D--~d~~G~I~f~EF~~~~~~l~~~~el~~aF~~fD-----~~-~G~Is~~EL~~fL~~~qge~ 112 (624)
T 1djx_A 41 NIQVDDGYARKIFRECD--HSQTDSLEDEEIETFYKMLTQRAEIDRAFEEAA-----GS-AETLSVERLVTFLQHQQREE 112 (624)
T ss_dssp -----------------------------CTTHHHHHHTCCHHHHHHHHHHH-----TT-SSSEEHHHHHHHHHHTSCCS
T ss_pred CCCCCHHHHHHHHHHhC--CCCCCeEeHHHHHHHHHHhccHHHHHHHHHHhc-----CC-CCeecHHHHHHHHHHHhCCC
Confidence 45556678999998874 4444567777886655443 567888888773 23 7999999998877532
Q ss_pred ---ChhHHHHhhccccc-hhhhh------hhhhhhhcccccccccc
Q 022114 168 ---NPVVAEIFSLMSRD-EARHA------GFLNKGLSDFNYALDLG 203 (302)
Q Consensus 168 ---nP~lae~F~lMaRD-EARHA------GFlNkal~Df~l~lDLg 203 (302)
...+.+++.-+-.| ++++. ||++--+++.|-.+|-.
T Consensus 113 ~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s~~~~~~~p~ 158 (624)
T 1djx_A 113 EAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSADGNAFSLA 158 (624)
T ss_dssp SCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHSTTTBSBCGG
T ss_pred CCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcCccccccCcc
Confidence 12466666665555 23333 35555555555555543
No 153
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=39.90 E-value=55 Score=23.97 Aligned_cols=76 Identities=17% Similarity=0.275 Sum_probs=48.9
Q ss_pred ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc-----cChhHHHHhhccccchhhhh
Q 022114 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----TNPVVAEIFSLMSRDEARHA 186 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~-----~nP~lae~F~lMaRDEARHA 186 (302)
|.|..-.+--+||...+..+....-..-++-+.+.+-..-+|.|-|.|...-+.. ....+..+|..+-+| +-
T Consensus 37 D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d---~~ 113 (166)
T 2aao_A 37 DADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKD---GS 113 (166)
T ss_dssp CTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHHHHTTHHHHHHHHHHCTT---CS
T ss_pred CCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhcccHHHHHHHHHHhCCC---CC
Confidence 7777778888888877766533323334666666777777888888887654432 234677888776554 34
Q ss_pred hhhh
Q 022114 187 GFLN 190 (302)
Q Consensus 187 GFlN 190 (302)
|+|+
T Consensus 114 G~i~ 117 (166)
T 2aao_A 114 GYIT 117 (166)
T ss_dssp SSBC
T ss_pred CcCc
Confidence 5544
No 154
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=39.57 E-value=36 Score=27.60 Aligned_cols=61 Identities=18% Similarity=0.315 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhc-CChHHHHHHHHHHHhhhhccccchhhHHHHh
Q 022114 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADK-MQGPLRQIFVEFLERSCTAEFSGFLLYKELG 161 (302)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~-l~~~~r~~FidFLerScTaEFSGflLyKEl~ 161 (302)
+|++.+...|+. .|+.-.+--++|...+.. .+......+++-+-+.+-..=+|.|-|.|..
T Consensus 64 ~ei~~l~~~F~~-~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~ 125 (229)
T 3dd4_A 64 KELQILYRGFKN-ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFI 125 (229)
T ss_dssp HHHHHHHHHHHT-TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHH
T ss_pred HHHHHHHHHHHh-hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHH
Confidence 444445444433 233333444455444433 2222333344444444444445555555443
No 155
>3chh_A P-aminobenzoate N-oxygenase; DI-iron oxygenase, oxidoreductase; 2.00A {Streptomyces thioluteus} PDB: 3chi_A 3cht_A* 3chu_A 2jcd_A
Probab=38.77 E-value=22 Score=32.94 Aligned_cols=66 Identities=21% Similarity=0.180 Sum_probs=43.8
Q ss_pred hhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcc
Q 022114 128 ADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSD 195 (302)
Q Consensus 128 ~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~D 195 (302)
....++ ..+.++-++.-.|.+|=+-=-+-+++.+- ..-.|.+.++...=.+||+||.+|--..++.
T Consensus 175 la~~~~-~~~~~l~~~a~~lvaEeiid~~~r~~~~D-~~vQP~vR~v~riHv~DEaRH~~fare~~~~ 240 (336)
T 3chh_A 175 LADMPE-QWERDIAVLVWGAVAETCINALLALLARD-ATIQPMHSLITTLHLRDETAHGSIVVEVVRE 240 (336)
T ss_dssp HTTCCC-HHHHHHHHHHHHHHHHHSBCHHHHHHHTC-SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HccCch-hhhhHHHHHHHHHHHHHHHHHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334433 33445555555566776655555566553 2247999999999999999999998775544
No 156
>2blf_B SORB, sulfite\:cytochrome C oxidoreductase subunit B; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_B* 2c9x_B* 2ca3_B* 2ca4_B*
Probab=38.66 E-value=46 Score=23.97 Aligned_cols=34 Identities=18% Similarity=0.312 Sum_probs=26.8
Q ss_pred cHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHh
Q 022114 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLER 145 (302)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLer 145 (302)
.+++|+++++.|..-+. ..|+++.++..++||..
T Consensus 46 ~~~~W~~~v~~M~~~~g--------------~~ls~~e~~~I~~YL~~ 79 (81)
T 2blf_B 46 GQAFWDAEVQKMIKVYH--------------APVDEADAKAIADYLAK 79 (81)
T ss_dssp CHHHHHHHHHHHHHTSC--------------CCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcC--------------CCCCHHHHHHHHHHHHH
Confidence 46799999999975432 26889999999999964
No 157
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=38.49 E-value=39 Score=24.49 Aligned_cols=81 Identities=11% Similarity=0.149 Sum_probs=45.2
Q ss_pred HHHHHHHHHh-hccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc---------cChh
Q 022114 101 EFEALLQEFK-TDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK---------TNPV 170 (302)
Q Consensus 101 E~~Aml~Efr-~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~---------~nP~ 170 (302)
+++.+.+-|+ -|.|..-.+--++|...+..+.......-++-+.+.+-..-+|.|-|.|...-+.. ....
T Consensus 18 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 97 (162)
T 1top_A 18 MIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEE 97 (162)
T ss_dssp HHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccccccccHHH
Confidence 3333333332 36667777777778776665432222334444555556666788877776655432 2234
Q ss_pred HHHHhhccccc
Q 022114 171 VAEIFSLMSRD 181 (302)
Q Consensus 171 lae~F~lMaRD 181 (302)
+.++|..+-+|
T Consensus 98 ~~~~F~~~D~d 108 (162)
T 1top_A 98 LANCFRIFDKN 108 (162)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHhCCC
Confidence 66777766544
No 158
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=38.39 E-value=43 Score=24.30 Aligned_cols=76 Identities=9% Similarity=0.189 Sum_probs=43.3
Q ss_pred ccCC-cccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc---------ChhHHHHhhccccc
Q 022114 112 DYNQ-THFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---------NPVVAEIFSLMSRD 181 (302)
Q Consensus 112 DyNr-~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~---------nP~lae~F~lMaRD 181 (302)
|.|. .-.+--+||...+..+....-..-++-+.+.+-..=+|.|-|.|...-+... ...+.++|..+-+|
T Consensus 28 D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d 107 (161)
T 1dtl_A 28 VLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKN 107 (161)
T ss_dssp TTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTT
T ss_pred cCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCC
Confidence 5565 5666667776666544322222334555556666678888888766544321 23467778776554
Q ss_pred hhhhhhhhh
Q 022114 182 EARHAGFLN 190 (302)
Q Consensus 182 EARHAGFlN 190 (302)
+-|+|+
T Consensus 108 ---~~G~i~ 113 (161)
T 1dtl_A 108 ---ADGYID 113 (161)
T ss_dssp ---CSSEEE
T ss_pred ---CCCcCc
Confidence 345544
No 159
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=38.29 E-value=74 Score=23.03 Aligned_cols=71 Identities=17% Similarity=0.145 Sum_probs=42.4
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCC----hHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc
Q 022114 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ----GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (302)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~----~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~ 166 (302)
...+..++++.++..+ |.|..-.+--+||...+.... ......-+.-+-+.+-..=+|.|-..|+.+=++.
T Consensus 49 ~~~~~~~~~~~~~~~~--D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~ 123 (161)
T 1dtl_A 49 GQNPTPEELQEMIDEV--DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQA 123 (161)
T ss_dssp TCCCCHHHHHHHHHHH--CTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTT
T ss_pred CCCCCHHHHHHHHHHh--CCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 4455667788888776 555556677777866544321 1111122233334446677899999999887754
No 160
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=38.28 E-value=67 Score=24.09 Aligned_cols=76 Identities=13% Similarity=0.180 Sum_probs=47.4
Q ss_pred ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhh
Q 022114 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNK 191 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNk 191 (302)
|.|..-.+--+||...+..+....-..-++-+.+.+. .=+|.|-|.|..+-+. ....+.++|..+-+| +-|.|..
T Consensus 87 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~-~~~~~~~~F~~~D~d---~~G~i~~ 161 (173)
T 1alv_A 87 DVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLV-RLDAMFRAFKSLDKD---GTGQIQV 161 (173)
T ss_dssp CTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHH-HHHHHHHHHHHHSSS---CCSEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHH-HHHHHHHHHHHhCCC---CCCeecH
Confidence 7777778888888776654422222223333444444 5688899998876664 346778888887665 4566554
Q ss_pred h
Q 022114 192 G 192 (302)
Q Consensus 192 a 192 (302)
.
T Consensus 162 ~ 162 (173)
T 1alv_A 162 N 162 (173)
T ss_dssp E
T ss_pred h
Confidence 3
No 161
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=38.23 E-value=60 Score=22.59 Aligned_cols=78 Identities=18% Similarity=0.229 Sum_probs=44.8
Q ss_pred ccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC---ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc----
Q 022114 95 KKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM---QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---- 167 (302)
Q Consensus 95 ~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l---~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~---- 167 (302)
..+..+|++.|++++- ..-.+-=+||...+... ..+.++.|--| -..=+|.|-..|+.+=++.-
T Consensus 5 ~~~~~~ei~~~~~~~D----~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~-----D~d~~G~i~~~el~~~l~~~~~~~ 75 (109)
T 3fs7_A 5 DILSAKDIESALSSCQ----AADSFNYKSFFSTVGLSSKTPDQIKKVFGIL-----DQDKSGFIEEEELQLFLKNFSSSA 75 (109)
T ss_dssp GTSCHHHHHHHHHHTC----STTCCCHHHHHHHHTCTTCCHHHHHHHHHHH-----STTCSSSBCHHHHHTTGGGTCTTS
T ss_pred CcCCHHHHHHHHHhcC----CCCcCcHHHHHHHHhcCCCcHHHHHHHHHHH-----CCCCCCeEeHHHHHHHHHHHhccc
Confidence 3455678888887773 22234445676555421 22344555433 55667888888887765533
Q ss_pred ----ChhHHHHhhccccc
Q 022114 168 ----NPVVAEIFSLMSRD 181 (302)
Q Consensus 168 ----nP~lae~F~lMaRD 181 (302)
...+.++|..+-.|
T Consensus 76 ~~~~~~~~~~~~~~~D~~ 93 (109)
T 3fs7_A 76 RVLTSAETKAFLAAGDTD 93 (109)
T ss_dssp CCCCHHHHHHHHHHHCTT
T ss_pred ccCCHHHHHHHHHHhCCC
Confidence 23566677666544
No 162
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=37.95 E-value=20 Score=27.79 Aligned_cols=17 Identities=12% Similarity=0.063 Sum_probs=9.1
Q ss_pred hccccchhhHHHHhhhh
Q 022114 148 TAEFSGFLLYKELGRRL 164 (302)
Q Consensus 148 TaEFSGflLyKEl~rrl 164 (302)
-..=+|.|-+.|+.+-+
T Consensus 117 D~d~~G~I~~~E~~~~l 133 (207)
T 2d8n_A 117 DVDGNGTISKNEVLEIV 133 (207)
T ss_dssp CTTCSSEECHHHHHHHH
T ss_pred cCCCCCeEcHHHHHHHH
Confidence 33445666666665544
No 163
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=37.83 E-value=28 Score=24.83 Aligned_cols=70 Identities=10% Similarity=0.197 Sum_probs=30.7
Q ss_pred ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc------cChhHHHHhhccccc
Q 022114 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK------TNPVVAEIFSLMSRD 181 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~------~nP~lae~F~lMaRD 181 (302)
|.|+.-.+--+||...+..+....-..-++-|.+.+-..=+|.|-|.|...-+.. ....+.++|..+-+|
T Consensus 16 D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d 91 (142)
T 2bl0_C 16 DSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPE 91 (142)
T ss_dssp CTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHHHHTCCS
T ss_pred CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHHHHHCCC
Confidence 4444444444555443332211111122333344444445566666665444332 223456666655444
No 164
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=37.74 E-value=57 Score=26.10 Aligned_cols=87 Identities=23% Similarity=0.353 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhh-ccC--CcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC------hh
Q 022114 100 AEFEALLQEFKT-DYN--QTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN------PV 170 (302)
Q Consensus 100 ~E~~Aml~Efr~-DyN--r~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n------P~ 170 (302)
+|++.+.+-|.. |.| +.-.+--+||...+.. ++......++-+.+.+-..=+|.|-|.|...-+.... ..
T Consensus 45 ~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~ 123 (226)
T 2zfd_A 45 SEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDK 123 (226)
T ss_dssp HHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHH
T ss_pred HHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHH
Confidence 344444444432 444 7777777788766543 2111122333344445566688888888776554222 24
Q ss_pred HHHHhhccccchhhhhhhhh
Q 022114 171 VAEIFSLMSRDEARHAGFLN 190 (302)
Q Consensus 171 lae~F~lMaRDEARHAGFlN 190 (302)
+.++|..+-+| +-|+|+
T Consensus 124 l~~~F~~~D~d---~~G~Is 140 (226)
T 2zfd_A 124 IHFSFQLYDLK---QQGFIE 140 (226)
T ss_dssp HHHHHHHHCTT---SSSSEE
T ss_pred HHHHHHHhCCC---CCCccc
Confidence 78888877665 345554
No 165
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=37.48 E-value=67 Score=22.29 Aligned_cols=75 Identities=19% Similarity=0.224 Sum_probs=37.1
Q ss_pred ccHHHHHHHHHHHhhccCCcccccChhHHHHhhc---CChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc------
Q 022114 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADK---MQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT------ 167 (302)
Q Consensus 97 ~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~---l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~------ 167 (302)
+.++|++.|++++- ....+-=+||...+.. -..+.++.|-.| -..=+|.|-..|+.+-++.-
T Consensus 6 ~~~~e~~~l~~~~d----~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~-----D~d~~G~I~~~el~~~l~~~~~~g~~ 76 (108)
T 2pvb_A 6 LKDADVAAALAACS----AADSFKHKEFFAKVGLASKSLDDVKKAFYVI-----DQDKSGFIEEDELKLFLQNFSPSARA 76 (108)
T ss_dssp SCHHHHHHHHHHTC----STTCCCHHHHHHHHTGGGSCHHHHHHHHHHH-----CTTCSSSBCHHHHHTGGGGTCTTSCC
T ss_pred CCHHHHHHHHHHhC----CCCcCcHHHHHHHHhCChhHHHHHHHHHHHH-----CCCCCCcCCHHHHHHHHHHHhccCCC
Confidence 44566666666653 1222444456544321 122344444433 44556777777777665432
Q ss_pred --ChhHHHHhhcccc
Q 022114 168 --NPVVAEIFSLMSR 180 (302)
Q Consensus 168 --nP~lae~F~lMaR 180 (302)
...+.++|..+-.
T Consensus 77 ~~~~~~~~~~~~~D~ 91 (108)
T 2pvb_A 77 LTDAETKAFLADGDK 91 (108)
T ss_dssp CCHHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHhCC
Confidence 2345555555443
No 166
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=37.22 E-value=93 Score=23.08 Aligned_cols=9 Identities=22% Similarity=0.504 Sum_probs=4.6
Q ss_pred hHHHHhhcc
Q 022114 170 VVAEIFSLM 178 (302)
Q Consensus 170 ~lae~F~lM 178 (302)
.+.++|..+
T Consensus 85 ~~~~~F~~~ 93 (179)
T 2f2o_A 85 EIREAFRVF 93 (179)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 355555544
No 167
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=37.22 E-value=42 Score=23.83 Aligned_cols=81 Identities=19% Similarity=0.189 Sum_probs=48.4
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC----------ChHHHHHHHHHHHhhhhccccchhhHHHHhhh
Q 022114 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM----------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRR 163 (302)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l----------~~~~r~~FidFLerScTaEFSGflLyKEl~rr 163 (302)
...+..++++.++..+-.| ..-.+-=+||...+... ..+.+..| +.+-..-+|.|-..|+.+=
T Consensus 41 ~~~~~~~~~~~l~~~~d~~--~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F-----~~~D~d~~G~i~~~el~~~ 113 (153)
T 3ox6_A 41 GYMPTEMELIELSQQINMN--LGGHVDFDDFVELMGPKLLAETADMIGVKELRDAF-----REFDTNGDGEISTSELREA 113 (153)
T ss_dssp TCCCCHHHHHHHHHHHHTT--STTCCCHHHHHHHHHHHHTTCCHHHHCHHHHHHHH-----HHHCTTCSSSBCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCC--CCccCcHHHHHHHHHHHhhccccccccHHHHHHHH-----HHhCCCCCCcCcHHHHHHH
Confidence 4566677888888887544 33445556775544321 12233444 3446677899999999876
Q ss_pred hcc------cChhHHHHhhccccc
Q 022114 164 LKK------TNPVVAEIFSLMSRD 181 (302)
Q Consensus 164 lk~------~nP~lae~F~lMaRD 181 (302)
++. ....+.++|..+-.|
T Consensus 114 l~~~~~~~~~~~~~~~~~~~~d~~ 137 (153)
T 3ox6_A 114 MRALLGHQVGHRDIEEIIRDVDLN 137 (153)
T ss_dssp HHHHHSSCCCHHHHHHHHHHHCSS
T ss_pred HHHHhcCCCCHHHHHHHHHHhCCC
Confidence 654 223566666665443
No 168
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=37.08 E-value=68 Score=22.72 Aligned_cols=69 Identities=7% Similarity=0.042 Sum_probs=37.5
Q ss_pred ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhh---hccccchhhHHHHhhhhccc--------ChhHHHHhhcccc
Q 022114 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSC---TAEFSGFLLYKELGRRLKKT--------NPVVAEIFSLMSR 180 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerSc---TaEFSGflLyKEl~rrlk~~--------nP~lae~F~lMaR 180 (302)
|.|+.-.+--++|...+..+....-..-++-|.+.+ -..- |.|-|.|...-+... ...+.++|..+-+
T Consensus 18 D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~ 96 (149)
T 2mys_C 18 DRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDK 96 (149)
T ss_pred CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHHHHHHHHHHhCC
Confidence 666666666677766555442221122233344444 3333 888888776555332 2456777877655
Q ss_pred c
Q 022114 181 D 181 (302)
Q Consensus 181 D 181 (302)
|
T Consensus 97 d 97 (149)
T 2mys_C 97 E 97 (149)
T ss_pred C
Confidence 4
No 169
>1vlg_A Ferritin; TM1128, structural genomics, JCSG, protein structu initiative, PSI, joint center for structural genomics, META protein; 2.00A {Thermotoga maritima} SCOP: a.25.1.1 PDB: 1z4a_A*
Probab=36.85 E-value=44 Score=26.92 Aligned_cols=136 Identities=12% Similarity=0.096 Sum_probs=96.9
Q ss_pred HHHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccc
Q 022114 136 RQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFF 214 (302)
Q Consensus 136 r~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF 214 (302)
++..++-|-+-...|+...-+|--++.-.++. -|.+++.|.-.|-+|..||--|=+-+.+.|-.+.++-+.+-+ -.|-
T Consensus 17 ~~~~~~~Ln~~l~~El~a~~~Yl~~a~~~~~~~~~~la~~f~~~a~EE~~HAd~l~eri~~lGg~~~l~~i~~p~-~~~~ 95 (176)
T 1vlg_A 17 SEKVRKALNDQLNREIYSSYLYLSMATYFDAEGFKGFAHWMKKQAQEELTHAMKFYEYIYERGGRVELEAIEKPP-SNWN 95 (176)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCC-CCCS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCCCCCC-CCCC
Confidence 34567788888888888777777777665544 589999999999999999999999999999998887776653 2344
Q ss_pred cchhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHh
Q 022114 215 KPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMK 275 (302)
Q Consensus 215 ~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmr 275 (302)
.+.=++=+..=.||.--.+|-.+...-+..-+. ..-++++..-+++-.|...+..++.
T Consensus 96 ~~~e~le~~l~~E~~v~~~~~~l~~~A~~~~D~---~t~~~l~~~l~eq~ee~~~l~~~l~ 153 (176)
T 1vlg_A 96 GIKDAFEAALKHEEFVTQSIYNILELASEEKDH---ATVSFLKWFVDEQVEEEDQVREILD 153 (176)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH---hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566666666667777666676777666666444 4455555555665555555555543
No 170
>1ji5_A DLP-1; dodecamer, four-helix bundle, metal transport; 2.50A {Bacillus anthracis} SCOP: a.25.1.1
Probab=36.72 E-value=88 Score=23.62 Aligned_cols=130 Identities=9% Similarity=-0.006 Sum_probs=91.0
Q ss_pred HHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhccccccccccc--------ccccCc
Q 022114 140 VEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF--------LTKARK 210 (302)
Q Consensus 140 idFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf--------Ltk~k~ 210 (302)
++-|-.-...|++.++-++-..=.++.. -+.+++.|.-.+.+|..||-=|-+-+.+.|-..+++. +.....
T Consensus 3 ~~~Ln~~la~e~~~~~~~~~~hw~v~g~~f~~l~~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i~~~~~ 82 (142)
T 1ji5_A 3 IEVLNKQVADWSVLFTKLHNFHWYVKGPQFFTLHEKFEELYTESATHIDEIAERILAIGGKPVATMKEYLEISSIQEAAY 82 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCCCCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhhCCCCCCCC
Confidence 4556666777887777777655545544 3788999999999999999999999999999988865 554433
Q ss_pred cccccchhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHH
Q 022114 211 YTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALM 274 (302)
Q Consensus 211 YTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lm 274 (302)
- + .++=++=...=.|+..=.+|=.+...-+..-|..-.. +++...++|-.|-.++.+.+
T Consensus 83 ~-~-~~~e~l~~~l~~e~~~~~~~~~~~~~a~~~~D~~t~~---~l~~~l~e~ek~~w~l~~~l 141 (142)
T 1ji5_A 83 G-E-TAEGMVEAIMKDYEMMLVELKKGMEIAQNSDDEMTSD---LLLGIYTELEKHAWMLRAFL 141 (142)
T ss_dssp T-C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH---HHHHHHHHHHHHHHHHHHHH
T ss_pred C-C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH---HHHHHHHHHHHHHHHHHHhc
Confidence 3 3 6777777777667755455545555445555555444 45556677888888777654
No 171
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=36.39 E-value=17 Score=27.44 Aligned_cols=81 Identities=19% Similarity=0.253 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc---cChhHHHHh
Q 022114 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK---TNPVVAEIF 175 (302)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~---~nP~lae~F 175 (302)
.++++.++..+ |.|..-.+--+||...+..........-+..+-+.+-..=+|.|-..|+.+-++. ....+.++|
T Consensus 86 ~~~~~~~~~~~--D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~ 163 (191)
T 3khe_A 86 EAEVDHILQSV--DFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVL 163 (191)
T ss_dssp HHHHHHHHHHT--CTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTTSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHh--CCCCCCcCCHHHHHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHccCCCCHHHHHHHH
Confidence 34445555444 5666666777788666543322222222333334556778999999999987752 123455566
Q ss_pred hccccc
Q 022114 176 SLMSRD 181 (302)
Q Consensus 176 ~lMaRD 181 (302)
..+..|
T Consensus 164 ~~~D~~ 169 (191)
T 3khe_A 164 QECDKN 169 (191)
T ss_dssp HHHCTT
T ss_pred HHhCCC
Confidence 555443
No 172
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=36.33 E-value=74 Score=25.20 Aligned_cols=67 Identities=12% Similarity=0.143 Sum_probs=39.5
Q ss_pred ccCCcccccChhHHHHhhcC----ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccc
Q 022114 112 DYNQTHFVRNKEFKEAADKM----QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRD 181 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l----~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRD 181 (302)
| |+.-++--+|+...+..+ ....-..-++-+.+-+. .=+|.|-|.|..+-+. ..+.+.++|+.+-+|
T Consensus 86 D-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~-~~~~~~~~F~~~D~d 156 (174)
T 2i7a_A 86 Q-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLM-RLEAMAKTFRNLSKD 156 (174)
T ss_dssp C-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHH-HHHHHHHHHHHHCSS
T ss_pred c-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHH-HHHHHHHHHHHhCCC
Confidence 7 777788888888777766 22111222233333333 3477788877665443 235677777777665
No 173
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=36.07 E-value=39 Score=24.49 Aligned_cols=86 Identities=16% Similarity=0.221 Sum_probs=49.0
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCC-hHH---HHHHHHHHHhhhhccccchhhHHHHhhhhcccC-
Q 022114 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ-GPL---RQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN- 168 (302)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~-~~~---r~~FidFLerScTaEFSGflLyKEl~rrlk~~n- 168 (302)
.+.+..++++.++..+ |.|..-.+.-+||...+.... ... ...-+.-+-+.+-..=+|.|-..|+.+-++...
T Consensus 50 ~~~~~~~~~~~~~~~~--d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~ 127 (162)
T 1top_A 50 GQNPTKEELDAIIEEV--DEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGE 127 (162)
T ss_dssp TCCCCHHHHHHHHHHH--CTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTC
T ss_pred CCCCCHHHHHHHHHHH--cCCCCCcEeHHHHHHHHHHHhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC
Confidence 4455667777777777 445555666677755443321 111 122222333344566688888888877665432
Q ss_pred ----hhHHHHhhccccc
Q 022114 169 ----PVVAEIFSLMSRD 181 (302)
Q Consensus 169 ----P~lae~F~lMaRD 181 (302)
..+.++|..+-.|
T Consensus 128 ~~~~~~~~~~~~~~d~~ 144 (162)
T 1top_A 128 HVTEEDIEDLMKDSDKN 144 (162)
T ss_dssp CCCHHHHHHHHHHHCTT
T ss_pred CCCHHHHHHHHHHhCCC
Confidence 4567777776554
No 174
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=35.58 E-value=40 Score=24.71 Aligned_cols=65 Identities=14% Similarity=0.300 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhh--hccccchhhHHHHhhhhc
Q 022114 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSC--TAEFSGFLLYKELGRRLK 165 (302)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerSc--TaEFSGflLyKEl~rrlk 165 (302)
.+++..+...+ |.|..-++--+||...+..+....-..=++-+.+.| -..=+|.|-|.|..+-+.
T Consensus 84 ~~~l~~~F~~~--D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 150 (159)
T 2ovk_C 84 ADEFMEAFKTF--DREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVM 150 (159)
T ss_dssp HHHHHHHHHHT--CTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCTTCCEEHHHHHHHHH
T ss_pred HHHHHHHHHHH--CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCCcEeHHHHHHHHh
Confidence 34444444433 555555566666665554432222222233334422 333456666666665553
No 175
>2yuk_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=35.20 E-value=13 Score=28.80 Aligned_cols=32 Identities=22% Similarity=0.155 Sum_probs=24.1
Q ss_pred ccchhhHH-HHhhhhcccChhHH-------HHhhccccch
Q 022114 151 FSGFLLYK-ELGRRLKKTNPVVA-------EIFSLMSRDE 182 (302)
Q Consensus 151 FSGflLyK-El~rrlk~~nP~la-------e~F~lMaRDE 182 (302)
-|+|+||- |-..+|+..||.+. +....|+-+|
T Consensus 27 ~sAf~lf~~e~R~kik~enP~~s~~~~eIse~Wk~ls~ee 66 (90)
T 2yuk_A 27 TVAPVLYTNINFPNLKEEFPDWTTRVKQIAKLWRKASSQE 66 (90)
T ss_dssp SSSHHHHHHHHCTTHHHHCCSHHHHHHHHHHHHHHSCHHH
T ss_pred ccHHHHHHHHhHHHHHHHCcCccchHHHHHHHHHcCCHHH
Confidence 37888886 66678888899877 6677776555
No 176
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=35.04 E-value=35 Score=24.33 Aligned_cols=84 Identities=17% Similarity=0.214 Sum_probs=44.5
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhc-CChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc-----
Q 022114 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADK-MQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT----- 167 (302)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~-l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~----- 167 (302)
...+..++++.++..+ |.|..-.+--+||...+.. +.......-+..+-+.+-..-+|.|-..|+.+=++..
T Consensus 36 ~~~~~~~~~~~l~~~~--d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~ 113 (142)
T 2bl0_C 36 GVRVEPAAFNEMFNEA--DATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLK 113 (142)
T ss_dssp TCCCCHHHHHHHHHHH--CTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCC
T ss_pred CCCCCHHHHHHHHHHh--CcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCC
Confidence 3444556677777665 3344444555666544432 1111111122222334456678888888887766533
Q ss_pred ChhHHHHhhccc
Q 022114 168 NPVVAEIFSLMS 179 (302)
Q Consensus 168 nP~lae~F~lMa 179 (302)
...+.++|..+-
T Consensus 114 ~~~~~~~~~~~d 125 (142)
T 2bl0_C 114 PHEFAEFLGITE 125 (142)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 335677777664
No 177
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=34.99 E-value=89 Score=21.64 Aligned_cols=61 Identities=25% Similarity=0.305 Sum_probs=28.4
Q ss_pred ccHHHHHHHHHHHhhccCCcccccChhHHHHhhc---CChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc
Q 022114 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADK---MQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (302)
Q Consensus 97 ~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~---l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~ 166 (302)
+.++|++.|++++- ..-.+--+||...+.. -..+.++.|-. +-..=+|.|-..|+.+-++.
T Consensus 6 ~t~~e~~~~~~~~d----~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~-----~D~d~~G~I~~~el~~~l~~ 69 (108)
T 1rro_A 6 LSAEDIAAALQECQ----DPDTFEPQKFFQTSGLSKMSASQVKDIFRF-----IDNDQSGYLDGDELKYFLQK 69 (108)
T ss_dssp SCHHHHHHHHHHTC----STTCCCHHHHHHHHSGGGSCHHHHHHHHHH-----HCTTCSSEECTHHHHTGGGG
T ss_pred CCHHHHHHHHHHcc----CCCCcCHHHHHHHHhcCcccHHHHHHHHHH-----hCCCCCCcCCHHHHHHHHHH
Confidence 34456666666652 1122334455444321 11223334432 24455666666666655543
No 178
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=34.84 E-value=1.7e+02 Score=23.12 Aligned_cols=68 Identities=18% Similarity=0.263 Sum_probs=48.1
Q ss_pred cccHHHHHHHHHHHhhccCCcccccChhHHHHhh--------cCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 022114 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAAD--------KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (302)
Q Consensus 96 ~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d--------~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (302)
....+++..+...+ |.|+.-.+--+||...+. .++++.-+.+++-+.+.+-..-+|.|-|.|...-+.
T Consensus 100 ~~~~~~l~~~F~~~--D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~ 175 (272)
T 2be4_A 100 LDNSVEFMKIWRKY--DADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILA 175 (272)
T ss_dssp CCCHHHHHHHHHHH--CTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSC
T ss_pred cccHHHHHHHHHHh--CCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHh
Confidence 44556666666666 777778888899977654 345544444566677777777899999999988764
No 179
>2pv4_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.95A {Shewanella amazonensis} SCOP: a.286.1.1
Probab=34.62 E-value=21 Score=30.58 Aligned_cols=65 Identities=29% Similarity=0.474 Sum_probs=40.3
Q ss_pred HHHHHHHHhhccCCcccccChhHHHHhhcCChHHH-----HHHHHH------HHhhh----------------hccccch
Q 022114 102 FEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLR-----QIFVEF------LERSC----------------TAEFSGF 154 (302)
Q Consensus 102 ~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r-----~~FidF------LerSc----------------TaEFSGf 154 (302)
...+.+|+-.| +++.|.++|+.||...+ ..|--| +-=|- ..|+.|
T Consensus 38 y~~l~~elled-------~e~~f~~aWdaLPaSAqnlld~eqFHgfyianawvqlsrVaQ~iaE~~d~d~e~~~~EY~~- 109 (145)
T 2pv4_A 38 YRSLCDELLAD-------RDGRFTRAWDQLPDSASSLFERCVFHGFYLANAWIQLSIVARDISELQDTDEAIAEQEYSG- 109 (145)
T ss_dssp HHHHHHHHHHT-------TTCHHHHHHHHSCHHHHTSSCHHHHHHHHHHHHHHHHHHHCCCHHHHHHTTTTSCHHHHHH-
T ss_pred HHHHHHHHHHh-------hhHHHHHHHHhCcHHHHhcccHHHhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHH-
Confidence 34455555554 78889999999998765 456555 32111 235677
Q ss_pred hh-------HHHHhhhhccc--ChhHHHH
Q 022114 155 LL-------YKELGRRLKKT--NPVVAEI 174 (302)
Q Consensus 155 lL-------yKEl~rrlk~~--nP~lae~ 174 (302)
++ -||+.|+||+. +|.+..=
T Consensus 110 l~~rv~~~~lKe~vKkLKKARtdr~m~ns 138 (145)
T 2pv4_A 110 LYVRVAEAALKESVKKLKKARTDRSMYNS 138 (145)
T ss_dssp HHHHHHHTHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHccCHHHHHH
Confidence 33 46888888865 5555433
No 180
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=34.24 E-value=80 Score=23.38 Aligned_cols=62 Identities=16% Similarity=0.211 Sum_probs=40.3
Q ss_pred cccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 022114 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (302)
Q Consensus 96 ~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (302)
.+..++++.|++++ |.|..-.+--+||...+..+ .+.++.|-.| -..=+|.|-..|+.+-++
T Consensus 36 ~~~~~~~~~l~~~~--D~~~~g~i~~~eF~~~~~~~-~~~~~~F~~~-----D~d~~G~i~~~el~~~l~ 97 (165)
T 1k94_A 36 PFSLETCRIMIAML--DRDHTGKMGFNAFKELWAAL-NAWKENFMTV-----DQDGSGTVEHHELRQAIG 97 (165)
T ss_dssp CCCHHHHHHHHHHH--CTTCSSCBCHHHHHHHHHHH-HHHHHHHHHH-----CTTCCSBCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHh--CCCCCCcCCHHHHHHHHHHH-HHHHHHHHHh-----CCCCCceECHHHHHHHHH
Confidence 34567888888876 45555556667776665543 4456666433 455688888888877664
No 181
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=33.35 E-value=32 Score=21.55 Aligned_cols=53 Identities=19% Similarity=0.081 Sum_probs=24.5
Q ss_pred ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 022114 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrl 164 (302)
|.|..-.+--+||...+..+....-..-++-+.+.+-..=+|.|-|.|...-+
T Consensus 11 D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~ 63 (67)
T 1tiz_A 11 DKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63 (67)
T ss_dssp CTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 33444444444444444433222112223334444455556777777766544
No 182
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=33.33 E-value=24 Score=25.52 Aligned_cols=76 Identities=9% Similarity=-0.022 Sum_probs=44.8
Q ss_pred ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhcc--ccchhhHHHHhhhhccc--------ChhHHHHhhccccc
Q 022114 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAE--FSGFLLYKELGRRLKKT--------NPVVAEIFSLMSRD 181 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaE--FSGflLyKEl~rrlk~~--------nP~lae~F~lMaRD 181 (302)
|.|+.-.+--+||...+..+....-..-++-|.+.+-.. -+|.|-|.|...-+... ...+.++|..+-+|
T Consensus 20 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~~F~~~D~d 99 (151)
T 1w7j_B 20 DRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKE 99 (151)
T ss_dssp CCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCHHHHHTTCTT
T ss_pred CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCCCCcHHHHHHHHHHhCCC
Confidence 666667777778877666542222233355555666555 67888888776554321 24567788877654
Q ss_pred hhhhhhhhh
Q 022114 182 EARHAGFLN 190 (302)
Q Consensus 182 EARHAGFlN 190 (302)
+-|+|+
T Consensus 100 ---~~G~I~ 105 (151)
T 1w7j_B 100 ---GNGKVM 105 (151)
T ss_dssp ---SSSEEE
T ss_pred ---CCCcCc
Confidence 455554
No 183
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=33.29 E-value=54 Score=25.76 Aligned_cols=18 Identities=22% Similarity=0.303 Sum_probs=8.0
Q ss_pred ccCCcccccChhHHHHhh
Q 022114 112 DYNQTHFVRNKEFKEAAD 129 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d 129 (302)
|.|..-++--+||...+.
T Consensus 94 D~d~~G~I~~~el~~~l~ 111 (176)
T 2lhi_A 94 DKNGDGLISAAELKHVLT 111 (176)
T ss_dssp CSSCSSSBCHHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHH
Confidence 444444444444444433
No 184
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=33.11 E-value=31 Score=26.98 Aligned_cols=80 Identities=19% Similarity=0.326 Sum_probs=46.5
Q ss_pred ccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCC-----hHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc--
Q 022114 95 KKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ-----GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-- 167 (302)
Q Consensus 95 ~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~-----~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~-- 167 (302)
..+..++++.|+..+ |.|..-.+--+||...+..+. ...+..|-.| -..=+|+|-..|+.+=++.-
T Consensus 41 ~~~~~~~~~~l~~~~--D~d~dG~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~-----D~d~dG~Is~~El~~~l~~~g~ 113 (188)
T 1s6i_A 41 SELMESEIKDLMDAA--DIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYF-----DKDGSGYITLDEIQQACKDFGL 113 (188)
T ss_dssp CCCCHHHHHHHHHHT--CTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHHHT-----TTTCSSEEEHHHHHHTTTTTTC
T ss_pred CCCCHHHHHHHHHHc--CCCCCCeEeHHHHHHHHHHHhccCHHHHHHHHHHHH-----CCCCCCcCcHHHHHHHHHHcCC
Confidence 444556777777765 444444455567766554442 3455555433 45668888888888766432
Q ss_pred -ChhHHHHhhccccc
Q 022114 168 -NPVVAEIFSLMSRD 181 (302)
Q Consensus 168 -nP~lae~F~lMaRD 181 (302)
...+.++|..+-.|
T Consensus 114 ~~~~~~~~~~~~D~d 128 (188)
T 1s6i_A 114 DDIHIDDMIKEIDQD 128 (188)
T ss_dssp CTTHHHHHHHHHCSS
T ss_pred CHHHHHHHHHHHCCC
Confidence 23455666555433
No 185
>1jig_A DLP-2; dodecamer, four-helix bundle, metal transport; 1.46A {Bacillus anthracis} SCOP: a.25.1.1
Probab=33.11 E-value=1.2e+02 Score=23.17 Aligned_cols=135 Identities=7% Similarity=-0.060 Sum_probs=99.2
Q ss_pred HHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-hhHHHHhhccccchhhhhhhhhhhhccccccccccc--------c
Q 022114 135 LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF--------L 205 (302)
Q Consensus 135 ~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf--------L 205 (302)
.|+.-++-|-.-...|++..+.|+-..=.++..+ ..+++.|.-.+-+|..||-=|-+-+.+.|-..+++. +
T Consensus 2 ~~~~v~~~LN~~la~~~~~~~~~~~~hw~v~g~~f~~lh~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i 81 (146)
T 1jig_A 2 TKTNVVEVLNKQVANWNVLYVKLHNYHWYVTGPHFFTLHEKFEEFYNEAGTYIDELAERILALEGKPLATMKEYLATSSV 81 (146)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCcC
Confidence 3566788888889999999999999988886554 568999999999999999999999999999998875 3
Q ss_pred cccCccccccchhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHH
Q 022114 206 TKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALM 274 (302)
Q Consensus 206 tk~k~YTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lm 274 (302)
+..+ -.+ .++=++=..+=.|+..=.+|=.+...-+..-++.-..+ ++...+++-.|-.++.+.+
T Consensus 82 ~~~~-~~~-~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~~l---l~~~l~e~ek~~w~l~~~l 145 (146)
T 1jig_A 82 NEGT-SKE-SAEEMVQTLVNDYSALIQELKEGMEVAGEAGDATSADM---LLAIHTTLEQHVWMLSAFL 145 (146)
T ss_dssp CCCC-SCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH---HHHHHHHHHHHHHHHHHHT
T ss_pred CCCC-CCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH---HHHHHHHHHHHHHHHHHhc
Confidence 3322 223 67777777776666655555555555555555555544 4455666777877776654
No 186
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=33.00 E-value=39 Score=25.13 Aligned_cols=70 Identities=17% Similarity=0.221 Sum_probs=41.7
Q ss_pred ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhh----cccC--hhHHHHhhccccc
Q 022114 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL----KKTN--PVVAEIFSLMSRD 181 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrl----k~~n--P~lae~F~lMaRD 181 (302)
|.|..-.+--+||...+..+.......-+.-+.+.+...-+|.+-|.|....+ +... ..|.++|..+-+|
T Consensus 20 D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~D~d 95 (148)
T 2lmt_A 20 DKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRD 95 (148)
T ss_dssp HCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHHHSS
T ss_pred cCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHHHHHHCCC
Confidence 66777777778887666544332223334455566677778888888765433 2222 2377788765444
No 187
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=32.74 E-value=40 Score=26.60 Aligned_cols=88 Identities=16% Similarity=0.167 Sum_probs=46.7
Q ss_pred HHHHHHHHHHhh-ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc-----cChhHHH
Q 022114 100 AEFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----TNPVVAE 173 (302)
Q Consensus 100 ~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~-----~nP~lae 173 (302)
+|.+.+.+-|+. |.|+.-.+--+||...+..+....-...++-|.+.+-..-+|.|-|.|...-+.. ....+..
T Consensus 54 ~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~ 133 (197)
T 3pm8_A 54 VEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLI 133 (197)
T ss_dssp HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHHH
Confidence 344444444433 6777777777888777665544444455666666666677888888887654322 1235677
Q ss_pred Hhhccccchhhhhhhhh
Q 022114 174 IFSLMSRDEARHAGFLN 190 (302)
Q Consensus 174 ~F~lMaRDEARHAGFlN 190 (302)
+|..+-.| +-|+|+
T Consensus 134 ~F~~~D~d---~~G~Is 147 (197)
T 3pm8_A 134 PFKFFDID---GNGKIS 147 (197)
T ss_dssp HHHHHCTT---CSSEEC
T ss_pred HHHHHCCC---CCCCCC
Confidence 78776554 345554
No 188
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=32.70 E-value=76 Score=24.47 Aligned_cols=84 Identities=14% Similarity=0.149 Sum_probs=52.0
Q ss_pred ccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc-----cChhH
Q 022114 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----TNPVV 171 (302)
Q Consensus 97 ~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~-----~nP~l 171 (302)
...+|++.+...|-.|. +.-.+--+||...+..+........++-+-+.+-..=+|.|-+.|+..-+.. ....+
T Consensus 19 ~~~~el~~~f~~~D~~~-~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~ 97 (204)
T 1jba_A 19 ADAAQLQEWYKKFLEEC-PSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKL 97 (204)
T ss_dssp HHHHHHHHHHHHHHSSS-TTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHH
T ss_pred CCHHHHHHHHHHHHhhC-CCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHH
Confidence 34567777777764431 4556667788877776654444445555556666677888888887665432 23356
Q ss_pred HHHhhccccc
Q 022114 172 AEIFSLMSRD 181 (302)
Q Consensus 172 ae~F~lMaRD 181 (302)
.++|..+-+|
T Consensus 98 ~~~F~~~D~d 107 (204)
T 1jba_A 98 KWTFKIYDKD 107 (204)
T ss_dssp HHHHHHHCSS
T ss_pred HHHHHHhCCC
Confidence 7777765444
No 189
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=32.29 E-value=50 Score=23.30 Aligned_cols=65 Identities=14% Similarity=0.224 Sum_probs=31.6
Q ss_pred cHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 022114 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (302)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrl 164 (302)
.++++..+...| |.|..-++--+||...+..+....-..-++-+.+.+-..-+|.|-|.|...-+
T Consensus 27 ~~~~l~~~F~~~--D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~ 91 (94)
T 2kz2_A 27 SEEEIREAFRVE--DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 91 (94)
T ss_dssp CHHHHHHHHHHH--CTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred HHHHHHHHHHHH--CCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 344555555544 55555556666665554433211111112223333444557777777766544
No 190
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=31.99 E-value=58 Score=29.05 Aligned_cols=79 Identities=18% Similarity=0.221 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc---cChhHHHHh
Q 022114 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK---TNPVVAEIF 175 (302)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~---~nP~lae~F 175 (302)
+++++.+++++ |.|..-.+--+||...+........+.-+.-+-+.+-..=+|.+-..|+.+-++. ...++.++|
T Consensus 381 ~~~~~~~~~~~--D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~ 458 (484)
T 3nyv_A 381 EHEVDQVLDAV--DFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVL 458 (484)
T ss_dssp HHHHHHHHHHH--TCCTTSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHh--CCCCCCeEeHHHHHHHHHhccccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhcCCCHHHHHHHH
Confidence 44555555555 5556666777778665544332222233333444456677899988888876643 123345555
Q ss_pred hccc
Q 022114 176 SLMS 179 (302)
Q Consensus 176 ~lMa 179 (302)
.-+-
T Consensus 459 ~~~D 462 (484)
T 3nyv_A 459 SEVD 462 (484)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 5443
No 191
>3ka8_A Ferritin, middle subunit; iron storage, DIIRON, iron, metal-binding, oxidoreductase; 1.35A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 3ka9_A 3ka3_A 1mfr_A 3ka4_A 3rbc_A 3re7_A 3rgd_A 4das_A* 3ka6_A 3shx_A 3sh6_A 3se1_A 1bg7_A
Probab=31.62 E-value=88 Score=25.69 Aligned_cols=132 Identities=14% Similarity=0.084 Sum_probs=103.5
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhccc---ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccc
Q 022114 139 FVEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (302)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~~---nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k~YTfF~ 215 (302)
.++-|-+=...|+.-.-+|--++.-.... -|-++..|.-.|-+|-.||--|=+-+.+.|-.+.|+-+.|-..-.|=.
T Consensus 13 v~~~LN~qin~El~As~~Yl~ma~~f~~~d~~l~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~~~~~~~ 92 (176)
T 3ka8_A 13 CEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMKYQNKRGGRVVLQDIKKPERDEWGN 92 (176)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeCcccCCCccccCC
Confidence 45566666678888888888888877633 588999999999999999999999999999999999998875555666
Q ss_pred chhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhh-hccccchhHHHHH
Q 022114 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWC-QDENRHGDFFSAL 273 (302)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WC-qDEnRHGdfFa~l 273 (302)
|.=++=+++--||---..+-.++..=+++-|+. ..+|++.|. .++-.|-+-+.-+
T Consensus 93 ~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~---t~~fLe~~fl~eQve~~~~l~~~ 148 (176)
T 3ka8_A 93 TLEAMQAALQLEKTVNQALLDLHKLATDKVDPH---LCDFLESEYLEEQVKHIKRIGDF 148 (176)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH---HHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChh---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 778888888899999999999999988876654 456677644 4555665555443
No 192
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=31.18 E-value=1.5e+02 Score=23.34 Aligned_cols=80 Identities=18% Similarity=0.313 Sum_probs=50.1
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhh--------cCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc-----
Q 022114 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAAD--------KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK----- 166 (302)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d--------~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~----- 166 (302)
+++..+...+ |.|+.-++--+||...+. .++++.-+.+++-+.+.+-..=+|.|-|.|...-+..
T Consensus 103 ~~l~~~F~~~--D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~ 180 (263)
T 2f33_A 103 EEFMKTWRKY--DTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFL 180 (263)
T ss_dssp HHHHHHHTTS--STTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSH
T ss_pred HHHHHHHHHH--CCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHH
Confidence 4444444433 666777777778876554 3444444445666777777777899999988765532
Q ss_pred --------cChhHHHHhhccccc
Q 022114 167 --------TNPVVAEIFSLMSRD 181 (302)
Q Consensus 167 --------~nP~lae~F~lMaRD 181 (302)
....+.++|..+-+|
T Consensus 181 ~~~~~~~~~~~~~~~~F~~~D~d 203 (263)
T 2f33_A 181 LKFQGIKMCGKEFNKAFELYDQD 203 (263)
T ss_dssp HHHHHTCCCHHHHHHHHHHHCCS
T ss_pred HHhcCcchHHHHHHHHHHHhCCC
Confidence 124567777766554
No 193
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=31.15 E-value=43 Score=24.39 Aligned_cols=81 Identities=16% Similarity=0.230 Sum_probs=47.6
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC------ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc
Q 022114 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (302)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l------~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~ 167 (302)
...+..++++.|++++-. |..-.+-=+||...+... ..+.++.|- .+-..=+|+|-..|+.+=++..
T Consensus 40 g~~~~~~~~~~l~~~~d~--~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~-----~~D~d~~G~I~~~el~~~l~~~ 112 (148)
T 1exr_A 40 GQNPTEAELQDMINEVDA--DGNGTIDFPEFLSLMARKMKEQDSEEELIEAFK-----VFDRDGNGLISAAELRHVMTNL 112 (148)
T ss_dssp TCCCCHHHHHHHHHHHCT--TCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHSTTCSSCBCHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHCC--CCCCcCcHHHHHHHHHhcccCCCcHHHHHHHHH-----HhCCCCCCcCCHHHHHHHHHHh
Confidence 445566778888877644 444455556775544321 123445553 3355668888888887765432
Q ss_pred -----ChhHHHHhhccccc
Q 022114 168 -----NPVVAEIFSLMSRD 181 (302)
Q Consensus 168 -----nP~lae~F~lMaRD 181 (302)
...+.++|.-+-.|
T Consensus 113 g~~~~~~~~~~~~~~~d~d 131 (148)
T 1exr_A 113 GEKLTDDEVDEMIREADID 131 (148)
T ss_dssp TCCCCHHHHHHHHHHHCSS
T ss_pred CCCCCHHHHHHHHHHhCCC
Confidence 34567777766544
No 194
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=30.92 E-value=41 Score=24.12 Aligned_cols=65 Identities=8% Similarity=0.039 Sum_probs=31.5
Q ss_pred ccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC-----------ChHHHHHHHHHHHhhhhccccchhhHHHHhhh
Q 022114 95 KKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-----------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRR 163 (302)
Q Consensus 95 ~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-----------~~~~r~~FidFLerScTaEFSGflLyKEl~rr 163 (302)
..+..++++.|+.++. |.|..-.+--++|...+... ....+..|- ..-..=+|.|-..|+.+=
T Consensus 35 ~~~~~~~~~~l~~~~~-D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~F~-----~~D~d~~G~I~~~el~~~ 108 (148)
T 1m45_A 35 YNPTNQLVQDIINADS-SLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQ-----VFDKESTGKVSVGDLRYM 108 (148)
T ss_dssp CCCCHHHHHHHHHC---CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHHHHHHH-----TTCSSSSSEEEHHHHHHH
T ss_pred CCCCHHHHHHHHHHhh-CCCCCCeEcHHHHHHHHHHHHhhccccccccHHHHHHHHH-----HhCCCCCCcCCHHHHHHH
Confidence 3444556666665542 33443344445554443333 133344443 234455788888877766
Q ss_pred hc
Q 022114 164 LK 165 (302)
Q Consensus 164 lk 165 (302)
++
T Consensus 109 l~ 110 (148)
T 1m45_A 109 LT 110 (148)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 195
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=30.49 E-value=55 Score=23.60 Aligned_cols=74 Identities=8% Similarity=0.177 Sum_probs=39.8
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhc-CC-----hHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc
Q 022114 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADK-MQ-----GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (302)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~-l~-----~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~ 167 (302)
...+..++++.++..+-.| +-=++|...+.. +. .+.+..| +.+-..=+|+|-..|+.+=++.-
T Consensus 45 g~~~~~~~~~~l~~~~d~~------i~~~eF~~~~~~~~~~~~~~~~l~~~F-----~~~D~d~~G~I~~~el~~~l~~~ 113 (146)
T 2qac_A 45 GLAPSSIDEKKIKELYGDN------LTYEQYLEYLSICVHDKDNVEELIKMF-----AHFDNNCTGYLTKSQMKNILTTW 113 (146)
T ss_dssp TCCCCHHHHHHHHHHHCSE------ECHHHHHHHHHHTCCTTCCHHHHHHHH-----HTTCTTCSSEEEHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHhCCC------CCHHHHHHHHHHHhcCcchHHHHHHHH-----HHhCCCCCCCCCHHHHHHHHHHh
Confidence 3445556666666665444 555566554442 21 2233444 33345567888777777655432
Q ss_pred -----ChhHHHHhhcc
Q 022114 168 -----NPVVAEIFSLM 178 (302)
Q Consensus 168 -----nP~lae~F~lM 178 (302)
...+.++|..+
T Consensus 114 g~~~~~~~~~~~~~~~ 129 (146)
T 2qac_A 114 GDALTDQEAIDALNAF 129 (146)
T ss_dssp SSCCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHc
Confidence 23566666655
No 196
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=30.32 E-value=99 Score=23.80 Aligned_cols=84 Identities=24% Similarity=0.284 Sum_probs=50.0
Q ss_pred ccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChH-HHHHHHHHHHhhhhccccchhhHHHHhhhhcc-----cChh
Q 022114 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGP-LRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----TNPV 170 (302)
Q Consensus 97 ~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~-~r~~FidFLerScTaEFSGflLyKEl~rrlk~-----~nP~ 170 (302)
..++|++.+.+.|..|. +.-.+--+||...+..+-+. .-...+.-+-+.+-..=+|.|-+.|+..-+.. ....
T Consensus 30 ~~~~~i~~~f~~~d~~~-~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~ 108 (207)
T 2d8n_A 30 FSEEELCSWYQSFLKDC-PTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQK 108 (207)
T ss_dssp CCHHHHHHHHHHHHHHC-TTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSSSTT
T ss_pred CCHHHHHHHHHHHHhhC-CCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHH
Confidence 35678888888886652 34456667787766655221 11233444445556667899988888765532 2335
Q ss_pred HHHHhhccccc
Q 022114 171 VAEIFSLMSRD 181 (302)
Q Consensus 171 lae~F~lMaRD 181 (302)
+.++|..+-+|
T Consensus 109 ~~~~f~~~D~d 119 (207)
T 2d8n_A 109 LEWAFSLYDVD 119 (207)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHhcCC
Confidence 66677655443
No 197
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=30.05 E-value=46 Score=23.66 Aligned_cols=63 Identities=14% Similarity=0.154 Sum_probs=36.8
Q ss_pred ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHH
Q 022114 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEI 174 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~ 174 (302)
|.|..-++--+||...+..+....-..-++-+.+.+-..-+|.|-|.|...-+... ++.++.+
T Consensus 42 D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~~~~~l~~i 105 (107)
T 2d58_A 42 DLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKMI 105 (107)
T ss_dssp CCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSSSSCCHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcccHHHHHH
Confidence 66777777777787666554322222223344444555567888888877666443 5555543
No 198
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=30.01 E-value=60 Score=24.69 Aligned_cols=85 Identities=22% Similarity=0.287 Sum_probs=50.3
Q ss_pred HHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-----hhHHHHh
Q 022114 101 EFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-----PVVAEIF 175 (302)
Q Consensus 101 E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n-----P~lae~F 175 (302)
++..+...+ |.|+.-.+--+||...+..+.......-++-+.+.+-..=+|.|-|.|...-+.... ..+.++|
T Consensus 38 ~l~~~F~~~--D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~~~F 115 (204)
T 3e3r_A 38 GLARFFRQL--DRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAF 115 (204)
T ss_dssp --CHHHHHH--CTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHH--ccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHHHHHH
Confidence 334444433 666666777777777666554333334455555566666789999998877665332 2577778
Q ss_pred hccccchhhhhhhhh
Q 022114 176 SLMSRDEARHAGFLN 190 (302)
Q Consensus 176 ~lMaRDEARHAGFlN 190 (302)
..+-+| +-|+|+
T Consensus 116 ~~~D~d---~~G~I~ 127 (204)
T 3e3r_A 116 AKLDRS---GDGVVT 127 (204)
T ss_dssp HHHCTT---CSSEEC
T ss_pred HHhCcC---CCCeEe
Confidence 776554 345554
No 199
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=29.77 E-value=52 Score=28.03 Aligned_cols=47 Identities=17% Similarity=0.220 Sum_probs=28.0
Q ss_pred cHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhh
Q 022114 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERS 146 (302)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerS 146 (302)
.+++++++.+.++.-|.+ -...+..++..++++.+.-+.|++||.+|
T Consensus 207 ~~~~~~~l~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 253 (266)
T 3r0s_A 207 DKDEVDRLSRAFKTLFRQ--GDLKENAKNLLENQESENVKKMCHFILET 253 (266)
T ss_dssp CHHHHHHHHHHHHHHHSS--SCHHHHHHHHHTTCCCHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHcc--CcHHHHHHHHHhhcCCHHHHHHHHHHHhc
Confidence 346777777777776654 22222333333333445677899999866
No 200
>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}
Probab=29.71 E-value=68 Score=29.09 Aligned_cols=149 Identities=17% Similarity=0.225 Sum_probs=83.6
Q ss_pred HHhhcCChHHHHHHHHHHHhh-hhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhccccccc----
Q 022114 126 EAADKMQGPLRQIFVEFLERS-CTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYAL---- 200 (302)
Q Consensus 126 ~~~d~l~~~~r~~FidFLerS-cTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~l---- 200 (302)
++|.+|+++.|..+.-=|--= ..-...|-.+ -.+..-+ .+|++.-.+...+=.|++|+-.-+.-+.-++..-
T Consensus 65 ~dw~~Lt~~Er~~~~~~l~~~~~~D~~v~~~l-~~l~~~~--~~~e~~~~~~~q~~~E~iHs~sYs~il~tl~~~~e~~~ 141 (346)
T 2rcc_A 65 KQFPTLTETEQEAFKKIIGLLAFLDSVQTDYS-MRAAEYL--TDSSLAALMSVLSFQEVVHNQSYSYVLSSLVPKATQDE 141 (346)
T ss_dssp HHGGGSCHHHHHHHHHHHHHHHHTTTTCCCHH-HHHHTTB--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHHH
Confidence 578889998888765433221 1112334445 6677777 6799999999999999999987777776665421
Q ss_pred ------ccccccccC-----ccccc--c--c-hhh--hhhhhhccccc-hhhHHHHHHHhhhCCCCcccchhhhhHhhhh
Q 022114 201 ------DLGFLTKAR-----KYTFF--K--P-KFI--FYATYLSEKIG-YWRYITIYRHLKANPEFQCYPIFKYFENWCQ 261 (302)
Q Consensus 201 ------DLgfLtk~k-----~YTfF--~--P-kfI--fYAtYLSEKIG-YwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCq 261 (302)
+...|.++- -|.=+ . | .+. +-|.++-|.|= |.=|-.|| .|.++. ..--+=+=.+-=+.
T Consensus 142 ~f~~~~~~p~l~~k~~~i~~~~~~~~~~~~~~~~~~~lva~~~lEgi~FysgF~~~~-~l~~~g--~m~g~~~~i~~I~R 218 (346)
T 2rcc_A 142 IFEYWKHDDVLKERNEFIIDGYEKFVDNPTPKTFLESIVYDVILEGLNFYSGFAFFY-NLARNQ--KMVSTSTMINYINR 218 (346)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTTTHHHHHHHH-HHHHTT--SSHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCC--CchhHHHHHHHHHh
Confidence 222333211 11000 0 0 110 11234445554 34444555 555542 22222222344467
Q ss_pred ccccchhHHHHHHh----hCccc
Q 022114 262 DENRHGDFFSALMK----AQPQF 280 (302)
Q Consensus 262 DEnRHGdfFa~lmr----aqP~l 280 (302)
||.+||+|...+++ ..|++
T Consensus 219 DE~~H~~f~~~l~~~l~~e~~~~ 241 (346)
T 2rcc_A 219 DEQLHVYLFTNIFKELLVEFPEL 241 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHCGGG
T ss_pred hHHHHHHHHHHHHHHHHhcCChh
Confidence 99999999888765 47766
No 201
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=29.66 E-value=1.3e+02 Score=22.27 Aligned_cols=63 Identities=24% Similarity=0.305 Sum_probs=41.7
Q ss_pred cccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc
Q 022114 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (302)
Q Consensus 96 ~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~ 166 (302)
.+..++++.++.++ |.|..-.+--+||...+..+ .+.++.|-.| -..=+|.|-..|+.+-++.
T Consensus 38 ~~~~~~~~~l~~~~--D~~~~g~i~~~eF~~~~~~~-~~~~~~F~~~-----D~d~~G~i~~~el~~~l~~ 100 (167)
T 1gjy_A 38 PFNLETCRLMVSML--DRDMSGTMGFNEFKELWAVL-NGWRQHFISF-----DSDRSGTVDPQELQKALTT 100 (167)
T ss_dssp CCCHHHHHHHHHHH--CTTCCSCBCHHHHHHHHHHH-HHHHHHHHHH-----CTTCCSEECHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHH--CCCCCCcCCHHHHHHHHHHH-HHHHHHHHHh-----CCCCCCcCCHHHHHHHHHH
Confidence 34567788888876 44555566667787666543 4566666533 5566899988888876653
No 202
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=29.22 E-value=35 Score=24.53 Aligned_cols=53 Identities=17% Similarity=0.152 Sum_probs=25.0
Q ss_pred ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 022114 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrl 164 (302)
|.|+.-++--+||...+..+....-..=++-+.+.+-..=+|.|-|.|..+-+
T Consensus 93 D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~ 145 (148)
T 1m45_A 93 DKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDV 145 (148)
T ss_dssp CSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence 55555555555665555443222222223333344444445666666655544
No 203
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=29.14 E-value=78 Score=24.15 Aligned_cols=75 Identities=15% Similarity=0.223 Sum_probs=42.3
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCC----hHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc---ChhHH
Q 022114 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ----GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVA 172 (302)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~----~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~---nP~la 172 (302)
++++.++..+ |.|..-.+-=+||...+..+. .+.++.|- .+-..=+|+|-..|+.+-++.. ..++.
T Consensus 73 ~~~~~~~~~~--D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~F~-----~~D~d~~G~I~~~El~~~l~~~~~~~~~~~ 145 (180)
T 3mse_B 73 WDINRILQAL--DINDRGNITYTEFMAGCYRWKNIESTFLKAAFN-----KIDKDEDGYISKSDIVSLVHDKVLDNNDID 145 (180)
T ss_dssp HHHHHHHHHH--CTTCCSEECHHHHHHHHSCCTTC--CHHHHHHH-----HHCTTCSSCBCHHHHHHHTTTSSCCHHHHH
T ss_pred HHHHHHHHHh--CCCCCCcCcHHHHHHHHHhcccCCHHHHHHHHH-----HHCCCCCCCCCHHHHHHHHcCCCCCHHHHH
Confidence 5666666655 444445566667766555442 23444443 3355567888888887766522 23455
Q ss_pred HHhhccccc
Q 022114 173 EIFSLMSRD 181 (302)
Q Consensus 173 e~F~lMaRD 181 (302)
++|..+-.|
T Consensus 146 ~~~~~~d~~ 154 (180)
T 3mse_B 146 NFFLSVHSI 154 (180)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHhhhc
Confidence 566555444
No 204
>2gs4_A Protein YCIF; stress proteins, rubrerythrin, metal binding protein; 2.00A {Escherichia coli} SCOP: a.25.1.4
Probab=29.14 E-value=50 Score=27.65 Aligned_cols=138 Identities=13% Similarity=0.103 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcc-ccccccc-------ccc
Q 022114 134 PLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSD-FNYALDL-------GFL 205 (302)
Q Consensus 134 ~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~D-f~l~lDL-------gfL 205 (302)
.++..|++-|-.=.-+|-..-=.+..+.+++ .||.|++.|.--..+=-+|..=|...+.. .|....= |.+
T Consensus 5 ~l~dlf~~~L~D~y~aE~q~~~al~~~~~~a--~~p~Lk~~l~~h~~eT~~qi~rLe~i~~~~lg~~~~~~~c~am~gli 82 (166)
T 2gs4_A 5 TIEDVFIHLLSDTYSAEKQLTRALAKLARAT--SNEKLSQAFHAHLEETHGQIERIDQVVESESNLKIKRMKCVAMEGLI 82 (166)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC--SCHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCCCCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCchHHHHHH
Confidence 3578999999999999999999999999999 77999999987666667788888888888 8764321 111
Q ss_pred cccCcc-ccccchhhhh-----hhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHHHHhh
Q 022114 206 TKARKY-TFFKPKFIFY-----ATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (302)
Q Consensus 206 tk~k~Y-TfF~PkfIfY-----AtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmra 276 (302)
...+.. .-+...=|.= +.|-.|-..=++|=+.-..=+.-.... .-+-++.=-++|-+|-+....+..+
T Consensus 83 ~e~~~~~~~~~~~~vlda~li~aaq~~EhyEIA~YgtL~a~A~~lG~~~---~~~lL~~~L~EE~~~d~~L~~la~~ 156 (166)
T 2gs4_A 83 EEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTLATLAEQLGYRK---AAKLLKETLEEEKATDIKLTDLAIN 156 (166)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111110 1122222332 223444444444433333222222222 3355666677777777777666543
No 205
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=29.07 E-value=1.6e+02 Score=21.01 Aligned_cols=16 Identities=19% Similarity=0.231 Sum_probs=7.6
Q ss_pred hccccchhhHHHHhhh
Q 022114 148 TAEFSGFLLYKELGRR 163 (302)
Q Consensus 148 TaEFSGflLyKEl~rr 163 (302)
-..=+|.|-..|+.+-
T Consensus 85 D~d~~G~i~~~e~~~~ 100 (155)
T 3ll8_B 85 DMDKDGYISNGELFQV 100 (155)
T ss_dssp CTTCSSCBCHHHHHHH
T ss_pred CCCCCCcCcHHHHHHH
Confidence 3444555555554443
No 206
>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*
Probab=28.99 E-value=30 Score=26.68 Aligned_cols=59 Identities=17% Similarity=0.187 Sum_probs=46.4
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcc-cChhHHHHhhccccchhhhhhhhhhhhcccc
Q 022114 139 FVEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGFLNKGLSDFN 197 (302)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~-~nP~lae~F~lMaRDEARHAGFlNkal~Df~ 197 (302)
-.+-|+.....|-...-.|+++..-..+ ..|.++.++.-+..||-.|+-+|.+.|...+
T Consensus 85 ~~e~l~~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~i~ 144 (161)
T 3uoi_A 85 LREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMD 144 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666667777777788888654432 5899999999999999999999999887654
No 207
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=28.95 E-value=67 Score=22.25 Aligned_cols=17 Identities=41% Similarity=0.554 Sum_probs=9.1
Q ss_pred hccccchhhHHHHhhhh
Q 022114 148 TAEFSGFLLYKELGRRL 164 (302)
Q Consensus 148 TaEFSGflLyKEl~rrl 164 (302)
-..=+|.|-..|+.+-+
T Consensus 51 D~d~~G~I~~~el~~~l 67 (109)
T 1rwy_A 51 DKDKSGFIEEDELGSIL 67 (109)
T ss_dssp STTCSSEECHHHHHTHH
T ss_pred CCCCCCeEcHHHHHHHH
Confidence 34445666666655444
No 208
>3n37_A Ribonucleoside-diphosphate reductase 2 subunit BE; ribonucleotide reductase, four-helix bundle, dimanganese CLU oxidoreductase; 1.65A {Escherichia coli} PDB: 3n38_A 3n39_B* 3n3a_B* 3n3b_B* 1r2f_A 2bq1_I* 2r2f_A
Probab=28.94 E-value=55 Score=29.56 Aligned_cols=141 Identities=16% Similarity=0.080 Sum_probs=77.5
Q ss_pred HHHhhcCChHHHHHHHHHHHhhhhccc-cchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccc----
Q 022114 125 KEAADKMQGPLRQIFVEFLERSCTAEF-SGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYA---- 199 (302)
Q Consensus 125 ~~~~d~l~~~~r~~FidFLerScTaEF-SGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~---- 199 (302)
.++|..|+++.|..+.--|--=..++- .|-.+-.-+...+ .+|.....+...+-.|+.|+-.-..-+.-++..
T Consensus 42 ~~dw~~Lt~~Er~~~~~~l~~~~~~D~iq~~~~~~~~~~~~--~~pe~~~~~~~q~~~E~iHs~sYs~il~tl~~~~e~~ 119 (319)
T 3n37_A 42 IPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDA--LTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVD 119 (319)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTHHHHHGGGC--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
Confidence 357889999998876543321111110 1222223344555 579999999999999999998776666555432
Q ss_pred ------cccccccccCc-----c---ccccchhhhhhhhhccccc-hhhHHHHHHHhhhCCCCcccchhhhhHhhhhccc
Q 022114 200 ------LDLGFLTKARK-----Y---TFFKPKFIFYATYLSEKIG-YWRYITIYRHLKANPEFQCYPIFKYFENWCQDEN 264 (302)
Q Consensus 200 ------lDLgfLtk~k~-----Y---TfF~PkfIfYAtYLSEKIG-YwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEn 264 (302)
.+...|.++-+ | ++.+ +.| |-++-|.|- |-=|..|| .|.++. ..--+=+=.+-=+.||.
T Consensus 120 ~~f~~i~~~p~l~~K~~~i~~~~~~~~~~~-~~v--a~~~lEgi~Fys~F~~~~-~l~~~g--~m~g~~~~i~~I~RDE~ 193 (319)
T 3n37_A 120 AAYAWSEENAPLQRKAQIIQQHYRGDDPLK-KKI--ASVFLESFLFYSGFWLPM-YFSSRG--KLTNTADLIRLIIRDEA 193 (319)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHSSCHHH-HHH--HHHHHHHTTTHHHHHHHH-HHHHTT--CSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHcCchHHH-HHH--HHHHHHHHHHHHHHHHHH-HHHhCC--CchhHHHHHHHHHHhHH
Confidence 22333433211 0 1111 112 244556653 35555555 565542 22222233444578999
Q ss_pred cchhHHHHH
Q 022114 265 RHGDFFSAL 273 (302)
Q Consensus 265 RHGdfFa~l 273 (302)
.||+|...+
T Consensus 194 ~H~~f~~~l 202 (319)
T 3n37_A 194 VHGYYIGYK 202 (319)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999985544
No 209
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=28.90 E-value=55 Score=24.28 Aligned_cols=81 Identities=22% Similarity=0.300 Sum_probs=48.2
Q ss_pred cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhc-CC-----hHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc-
Q 022114 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADK-MQ-----GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK- 166 (302)
Q Consensus 94 d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~-l~-----~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~- 166 (302)
...+..+++..++.++-.| ..-.+.-.+|...+.. +. .+.++.|--| -..=+|+|-..||.+=++.
T Consensus 40 ~~~~~~~~~~~~~~~~d~~--~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~-----D~d~~G~I~~~El~~~l~~~ 112 (148)
T 2lmt_A 40 GQNPTEAELQDLIAEAENN--NNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIF-----DRDGDGFISPAELRFVMINL 112 (148)
T ss_dssp TCCCCHHHHHHHHHHHHTT--STTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHH-----HSSCSSEECHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHhcccC--CCCcccHHHHHHHHHHHhcccCcHHHHHHHHHHH-----CCCCcCcCcHHHHHHHHHHc
Confidence 5566677888888776444 4444555666543322 21 3356666543 5667888888887665432
Q ss_pred ----cChhHHHHhhccccc
Q 022114 167 ----TNPVVAEIFSLMSRD 181 (302)
Q Consensus 167 ----~nP~lae~F~lMaRD 181 (302)
+...+.++|..+-.|
T Consensus 113 g~~~~~~e~~~l~~~~D~d 131 (148)
T 2lmt_A 113 GEKVTDEEIDEMIREADFD 131 (148)
T ss_dssp TCCCCHHHHHHHHHHHCCS
T ss_pred CccccHHHHHHHHHHhCCC
Confidence 234567777766554
No 210
>3dka_A DINB-like protein; DINB/YFIT-like putative metalloenzyme fold, structural genom joint center for structural genomics, JCSG; 2.30A {Bacillus subtilis}
Probab=28.68 E-value=40 Score=25.15 Aligned_cols=32 Identities=16% Similarity=0.123 Sum_probs=27.6
Q ss_pred hhHHHHhhccccchhhhhhhhhhhhccccccc
Q 022114 169 PVVAEIFSLMSRDEARHAGFLNKGLSDFNYAL 200 (302)
Q Consensus 169 P~lae~F~lMaRDEARHAGFlNkal~Df~l~l 200 (302)
-.+.++...+.-.++.|.|=|.-.|+..|+..
T Consensus 116 ~t~~~~l~~~~~H~~hH~GQi~~~lr~~g~~~ 147 (155)
T 3dka_A 116 VTGRALLQLAMEHEIHHKGNLFVYVREMGHTE 147 (155)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccHHHHHHHHHhHHHHhHHHHHHHHHHcCCCC
Confidence 45677888889999999999999999998864
No 211
>1z6o_M Ferritin heavy chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1
Probab=28.53 E-value=2.3e+02 Score=23.52 Aligned_cols=121 Identities=16% Similarity=0.116 Sum_probs=101.2
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhcc---cChhHHHHhhccccchhhhhhhhhhhhccccccc----ccccccccCc
Q 022114 138 IFVEFLERSCTAEFSGFLLYKELGRRLKK---TNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYAL----DLGFLTKARK 210 (302)
Q Consensus 138 ~FidFLerScTaEFSGflLyKEl~rrlk~---~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~l----DLgfLtk~k~ 210 (302)
..++-|-+=...|+...-+|=-+++-..+ .-|-++..|.-.|-+|-.||-=|=+-+.+.|-.+ .|+-+.+-..
T Consensus 20 ~~~~~LN~qin~El~As~~Yl~ma~~f~~~~~~l~g~a~~f~~~s~EE~~HA~kli~yi~~rGg~~~~~~~l~~i~~p~~ 99 (191)
T 1z6o_M 20 SCRNSMRQQIQMEVGASLQYLAMGAHFSKDVVNRPGFAQLFFDAASEEREHAMKLIEYLLMRGELTNDVSSLLQVRPPTR 99 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCGGGCCCCCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhhhcCCCCCc
Confidence 46677777779999999999999988866 2499999999999999999988888888888888 7777766544
Q ss_pred cccccchhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHh
Q 022114 211 YTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFEN 258 (302)
Q Consensus 211 YTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~ 258 (302)
-.|=.|.=++=+.+=-||--=.++-.++..-+++.++.=+.+.+|+|.
T Consensus 100 ~~~~~~~e~le~aL~~Ek~v~~~i~~l~~~a~~~~D~~d~~~~d~Le~ 147 (191)
T 1z6o_M 100 SSWKGGVEALEHALSMESDVTKSIRNVIKACEDDSEFNDYHLVDYLTG 147 (191)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHH
Confidence 445577788888888999999999999999999988888888888765
No 212
>3e6s_A Ferritin; iron storage, ferroxidase, oxidoreductase; 1.95A {Pseudo-nitzschia multiseries} SCOP: a.25.1.1 PDB: 3e6r_A
Probab=28.45 E-value=1e+02 Score=25.19 Aligned_cols=131 Identities=12% Similarity=0.137 Sum_probs=99.9
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccccccccccccC-ccccccc
Q 022114 139 FVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKAR-KYTFFKP 216 (302)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~k-~YTfF~P 216 (302)
.++-|-+=...|+.-.-+|--++.-..+. -|-++..|.-.|-+|-.||--|=+-+.+.|-.+.|+-+.|-+ .-.|=.|
T Consensus 5 v~~~LN~qin~El~As~~Yl~ma~~f~~~~l~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~~~~~~~~~ 84 (168)
T 3e6s_A 5 LLDLFNRQVTQEFTASQVYLSASIWFDQNDWEGMAAYMLAESAEEREHGLGFVDFANKRNIPIELQAVPAPVSCAEWSSP 84 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCGGGTCCSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcCCCCccccCCCH
Confidence 44555555666776666777666655433 488999999999999999998888899999999999988876 2445577
Q ss_pred hhhhhhhhhccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhccccchhHHHH
Q 022114 217 KFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSA 272 (302)
Q Consensus 217 kfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~ 272 (302)
.=++=+.+--||---..+-.++..=+++-|+.-.-++.|| -.++-.|-+-+.-
T Consensus 85 ~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe~f---l~eQve~~~~l~~ 137 (168)
T 3e6s_A 85 EDVWQSILELEQANTRSLLNLAEAASTCHDFAVMAFLNPF---HLQQVNEEDKIGS 137 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHhHHHHHHHH---HHHHHHHHHHHHH
Confidence 7789999999999999999999999988887776665554 3455666555543
No 213
>3mjo_A Ribonucleotide reductase subunit R2F; Mn ribonucleotide reductase, RNR, radical enzyme, split SIGN metallocofactor; 1.36A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1uzr_A*
Probab=28.37 E-value=54 Score=29.34 Aligned_cols=140 Identities=15% Similarity=0.084 Sum_probs=76.3
Q ss_pred HHhhcCChHHHHHHHHHHHhhhhccc-cchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccc-----
Q 022114 126 EAADKMQGPLRQIFVEFLERSCTAEF-SGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYA----- 199 (302)
Q Consensus 126 ~~~d~l~~~~r~~FidFLerScTaEF-SGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~----- 199 (302)
++|..|+++.|..+.--|--=..++- .|-.+-.-+...+ ..|.....+...+-.|+.|+-.-..-+.-++..
T Consensus 52 ~dw~~Ls~~Er~~~~~~l~~~~~~D~iq~~~~~~~~~~~~--~~pe~~~~~~~q~~~E~iHs~sYs~il~tl~~~~e~~~ 129 (296)
T 3mjo_A 52 QSWNKMTPQEQLATMRVFTGLTLLDTIQGTVGAISLLPDA--ETMHEEAVYTNIAFMESVHAKSYSNIFMTLASTPQINE 129 (296)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTHHHHHGGGC--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 57888999888776543321111110 1212223344555 579999999999999999998766666555432
Q ss_pred -----cccccccccCc-----c---ccccchhhhhhhhhccccc-hhhHHHHHHHhhhCCCCcccchhhhhHhhhhcccc
Q 022114 200 -----LDLGFLTKARK-----Y---TFFKPKFIFYATYLSEKIG-YWRYITIYRHLKANPEFQCYPIFKYFENWCQDENR 265 (302)
Q Consensus 200 -----lDLgfLtk~k~-----Y---TfF~PkfIfYAtYLSEKIG-YwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEnR 265 (302)
.+...|.|+-+ | ++.+ +.| |-++-|.|- |-=|-.|| .|.++. ..--+=+=.+-=+.||..
T Consensus 130 ~f~~i~~~p~l~~K~~~i~~~~~~~~~~~-~~v--a~~~lEGi~FysgF~~~~-~l~~~g--~m~g~~~~i~~I~RDE~l 203 (296)
T 3mjo_A 130 AFRWSEENENLQRKAKIIMSYYNGDDPLK-KKV--ASTLLESFLFYSGFYLPM-YLSSRA--KLTNTADIIRLIIRDESV 203 (296)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHTSSCHHH-HHH--HHHHHHHTHHHHHTHHHH-HHHHTT--SSHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHhcCCcHHH-HHH--HHHHHHHHHHHHHHHHHH-HHHhCC--CcchHHHHHHHHHHHHHH
Confidence 22333333211 0 1111 122 244556553 34455555 565542 222233334455789999
Q ss_pred chhHHHHH
Q 022114 266 HGDFFSAL 273 (302)
Q Consensus 266 HGdfFa~l 273 (302)
||+|...+
T Consensus 204 H~~f~~~l 211 (296)
T 3mjo_A 204 HGYYIGYK 211 (296)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99985544
No 214
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=28.15 E-value=68 Score=23.29 Aligned_cols=84 Identities=14% Similarity=0.147 Sum_probs=50.3
Q ss_pred HHHHHHHHHhhcc--CCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc-------ChhH
Q 022114 101 EFEALLQEFKTDY--NQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-------NPVV 171 (302)
Q Consensus 101 E~~Aml~Efr~Dy--Nr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~-------nP~l 171 (302)
++..+...+ |. |+.-.+--+||...+..+....-..-++-| +.+-..=+|.|-|.|...-+... ...+
T Consensus 10 ~l~~~F~~~--D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l 86 (156)
T 1wdc_C 10 DLKDVFELF--DFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADY 86 (156)
T ss_dssp HHHHHHHHH--HHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHH
T ss_pred HHHHHHHHH--ccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHH
Confidence 344444444 55 666677778887776654322222335555 66666678888888876544322 2567
Q ss_pred HHHhhccccchhhhhhhhh
Q 022114 172 AEIFSLMSRDEARHAGFLN 190 (302)
Q Consensus 172 ae~F~lMaRDEARHAGFlN 190 (302)
.++|..+-+| +-|+|+
T Consensus 87 ~~~F~~~D~d---~~G~I~ 102 (156)
T 1wdc_C 87 MEAFKTFDRE---GQGFIS 102 (156)
T ss_dssp HHHHHTTCSS---SSSEEE
T ss_pred HHHHHHhCCC---CCCcCc
Confidence 8888877655 345554
No 215
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=28.14 E-value=71 Score=22.19 Aligned_cols=78 Identities=19% Similarity=0.212 Sum_probs=42.2
Q ss_pred ccccHHHHHHHHHHHhhccCCcccccChhHHHHhhc---CChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc-----
Q 022114 95 KKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADK---MQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK----- 166 (302)
Q Consensus 95 ~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~---l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~----- 166 (302)
.++..+|+++|++++- ..-.+-=+||...+.. -..+.++.|-.| -..=+|.|-..|+.+-++.
T Consensus 5 ~~~~~~e~~~~~~~~d----~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~-----D~d~~G~I~~~el~~~l~~~~~~g 75 (109)
T 1bu3_A 5 GILADADVAAALKACE----AADSFNYKAFFAKVGLTAKSADDIKKAFFVI-----DQDKSGFIEEDELKLFLQVFSAGA 75 (109)
T ss_dssp CSSCHHHHHHHHHHTC----STTCCCHHHHHHHHTGGGSCHHHHHHHHHHH-----CTTCSSSEEHHHHHTHHHHHSTTC
T ss_pred ccCCHHHHHHHHHHhC----CCCcCcHHHHHHHHHcChhhHHHHHHHHHHH-----CCCCCCcCcHHHHHHHHHHHcccC
Confidence 4455667777777753 1223444566554431 122344555433 4556788877777765542
Q ss_pred ---cChhHHHHhhccccc
Q 022114 167 ---TNPVVAEIFSLMSRD 181 (302)
Q Consensus 167 ---~nP~lae~F~lMaRD 181 (302)
....+.++|..+-.|
T Consensus 76 ~~~~~~~~~~~~~~~D~~ 93 (109)
T 1bu3_A 76 RALTDAETKAFLKAGDSD 93 (109)
T ss_dssp CCCCHHHHHHHHHHHCTT
T ss_pred CCCCHHHHHHHHHHhCCC
Confidence 234566666655443
No 216
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=27.80 E-value=31 Score=25.07 Aligned_cols=16 Identities=13% Similarity=0.264 Sum_probs=9.5
Q ss_pred ccccHHHHHHHHHHHh
Q 022114 95 KKLNQAEFEALLQEFK 110 (302)
Q Consensus 95 ~~~~r~E~~Aml~Efr 110 (302)
-...-+||-+++....
T Consensus 65 g~i~~~eF~~~~~~~~ 80 (158)
T 2jnf_A 65 GDIDFDSFKIIGARFL 80 (158)
T ss_dssp SEECHHHHHHHHHHHC
T ss_pred CcCcHHHHHHHHHHHh
Confidence 3355667777766543
No 217
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=27.73 E-value=1.2e+02 Score=20.95 Aligned_cols=76 Identities=20% Similarity=0.300 Sum_probs=38.8
Q ss_pred cccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCC----hHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc----
Q 022114 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ----GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---- 167 (302)
Q Consensus 96 ~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~----~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~---- 167 (302)
.+..+|++.|+.++- .| --+--+||...+. ++ .+.++.|- .+-..=+|+|-..|+.+-++.-
T Consensus 6 ~~t~~e~~~~~~~~d--~~--g~i~~~ef~~~~~-~~~~~~~~l~~~F~-----~~D~d~~G~I~~~el~~~l~~~~~~g 75 (110)
T 1pva_A 6 LLKADDIKKALDAVK--AE--GSFNHKKFFALVG-LKAMSANDVKKVFK-----AIDADASGFIEEEELKFVLKSFAADG 75 (110)
T ss_dssp HSCHHHHHHHHHHTC--ST--TCCCHHHHHHHHT-CTTSCHHHHHHHHH-----HHCTTCSSSBCHHHHHTGGGGTCTTC
T ss_pred cCCHHHHHHHHHhcC--CC--CcCcHHHHHHHHc-cCcchHHHHHHHHH-----HhCCCCCCcCcHHHHHHHHHHHhhcC
Confidence 344567777777653 11 1233356655542 22 22344443 2345567777777777665532
Q ss_pred ----ChhHHHHhhccccc
Q 022114 168 ----NPVVAEIFSLMSRD 181 (302)
Q Consensus 168 ----nP~lae~F~lMaRD 181 (302)
...+.++|..+-.|
T Consensus 76 ~~~~~~~~~~~~~~~d~~ 93 (110)
T 1pva_A 76 RDLTDAETKAFLKAADKD 93 (110)
T ss_dssp CCCCHHHHHHHHHHHCTT
T ss_pred CCCCHHHHHHHHHHhCCC
Confidence 23455666655443
No 218
>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*
Probab=27.70 E-value=35 Score=25.93 Aligned_cols=58 Identities=21% Similarity=0.222 Sum_probs=47.6
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcc-cChhHHHHhhccccchhhhhhhhhhhhccc
Q 022114 139 FVEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGFLNKGLSDF 196 (302)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~-~nP~lae~F~lMaRDEARHAGFlNkal~Df 196 (302)
-.+-|+.....|-...-.|+++.+...+ ..|..+.++.-+..||..|+-+|...|...
T Consensus 83 ~~e~l~~~l~~E~~~~~~y~~~~~~a~~~~D~~t~~~l~~~~~ee~~h~~~l~~~l~~l 141 (158)
T 2y3q_A 83 VEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLI 141 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4466677778888888889998886543 579999999999999999999999887653
No 219
>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*
Probab=27.56 E-value=37 Score=26.84 Aligned_cols=58 Identities=17% Similarity=0.190 Sum_probs=47.7
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcc-cChhHHHHhhccccchhhhhhhhhhhhccc
Q 022114 139 FVEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGFLNKGLSDF 196 (302)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~-~nP~lae~F~lMaRDEARHAGFlNkal~Df 196 (302)
-.+-|+.....|-...-.|+++.....+ ..|..+.++.-+..||..|+-.|...|...
T Consensus 88 ~~e~l~~al~~E~~~~~~y~~l~~~a~~~~D~~t~~~l~~~~~eEe~h~~~l~~~l~~l 146 (179)
T 1nfv_A 88 VPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHI 146 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777888888888899998875532 589999999999999999998888877643
No 220
>3dhz_A Ribonucleotide reductase subunit R2F; metal free, hydrogen bond, metal binding protein; 1.63A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1kgo_A 1kgp_A 1oqu_A 1kgn_A
Probab=27.31 E-value=54 Score=29.80 Aligned_cols=141 Identities=15% Similarity=0.078 Sum_probs=77.0
Q ss_pred HHHhhcCChHHHHHHHHHHHhhhhccc-cchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccc----
Q 022114 125 KEAADKMQGPLRQIFVEFLERSCTAEF-SGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYA---- 199 (302)
Q Consensus 125 ~~~~d~l~~~~r~~FidFLerScTaEF-SGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~---- 199 (302)
.++|..|+++.|..+.--|--=..++- .|-++-.-+...+ ..|.....+...+-.|+.|+-.-..-+.-++..
T Consensus 52 ~~dw~~Lt~~Er~~~~~~l~~~~~~D~iq~~~~~~~~~~~~--~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~~~e~~ 129 (329)
T 3dhz_A 52 IQSWNKMTPQEQLATMRVFTGLTLLDTIQGTVGAISLLPDA--ETMHEEAVYTNIAFMESVHAKSYSNIFMTLASTPQIN 129 (329)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHTHHHHTGGGC--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 357888999988876543321111111 1222222344555 569999999999999999998766666555432
Q ss_pred ------cccccccccCc-----c---ccccchhhhhhhhhccccc-hhhHHHHHHHhhhCCCCcccchhhhhHhhhhccc
Q 022114 200 ------LDLGFLTKARK-----Y---TFFKPKFIFYATYLSEKIG-YWRYITIYRHLKANPEFQCYPIFKYFENWCQDEN 264 (302)
Q Consensus 200 ------lDLgfLtk~k~-----Y---TfF~PkfIfYAtYLSEKIG-YwRYItIyRHLe~~Pe~rf~PIFk~Fe~WCqDEn 264 (302)
.+...|.++-+ | ++.+ +.| |-++-|.|- |-=|..|| .|.++. ..--+=+=.+-=+.||.
T Consensus 130 ~~f~~i~~~p~l~~K~~~i~~~~~~~~~~~-~~v--a~~~lEGi~FysgF~~~~-~l~~~g--~m~g~~~~i~~I~RDE~ 203 (329)
T 3dhz_A 130 EAFRWSEENENLQRKAKIIMSYYNGDDPLK-KKV--ASTLLESFLFYSGFYLPM-YLSSRA--KLTNTADIIRLIIRDES 203 (329)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHTSSCHHH-HHH--HHHHHHHTTTHHHHHHHH-HHHTTT--SSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHcCCcHHH-HHH--HHHHHHHHHHHHHHHHHH-HHHhCC--CCccHHHHHHHHHHHHH
Confidence 22333433211 0 1111 112 244556653 35555566 555542 22222233344578999
Q ss_pred cchhHHHHH
Q 022114 265 RHGDFFSAL 273 (302)
Q Consensus 265 RHGdfFa~l 273 (302)
.||+|...+
T Consensus 204 lH~~f~~~l 212 (329)
T 3dhz_A 204 VHGYYIGYK 212 (329)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999975544
No 221
>2gyq_A YCFI, putative structural protein; structural genomics, APC6105, iron-binding, PSI, protein STR initiative; 1.40A {Rhodopseudomonas palustris} SCOP: a.25.1.4
Probab=27.00 E-value=53 Score=27.73 Aligned_cols=65 Identities=9% Similarity=0.036 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhccccccc
Q 022114 134 PLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYAL 200 (302)
Q Consensus 134 ~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~l 200 (302)
.++..|++.|..=.-+|-..-=.+..+.+++ .||.|++.|.---.+=-+|..=|...+...|...
T Consensus 12 ~l~dlf~~~L~Diy~aE~q~~~aL~~~~~~a--~~p~Lk~~l~~H~~eT~~qi~rLe~i~~~lg~~~ 76 (173)
T 2gyq_A 12 TMEDLLLHGLRDIYYAEQQITKALPKMIEQA--TNRDLSQGLTSHLEETQKQIERLDQVFKKLGQKP 76 (173)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 4678999999999999999999999999999 7799999998766666778888888888877643
No 222
>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} SCOP: a.25.1.1
Probab=26.91 E-value=28 Score=26.90 Aligned_cols=59 Identities=20% Similarity=0.246 Sum_probs=46.5
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhc-ccChhHHHHhhccccchhhhhhhhhhhhcccc
Q 022114 139 FVEFLERSCTAEFSGFLLYKELGRRLK-KTNPVVAEIFSLMSRDEARHAGFLNKGLSDFN 197 (302)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk-~~nP~lae~F~lMaRDEARHAGFlNkal~Df~ 197 (302)
-.+-|+.....|-...-.|+++..--. ...|..+.+|.-+.+||-.|+-+|.+.+...+
T Consensus 83 ~~e~l~~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~~~~eEe~h~~~l~~~l~~i~ 142 (161)
T 3gvy_A 83 LRETLDADLAAEHDARTLYIEARDHCEKVRDYPSKMLFEELIADEEGHIDYLETQIDLMG 142 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCHHHHTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666777778777778888765443 25799999999999999999999999876543
No 223
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=26.89 E-value=43 Score=23.90 Aligned_cols=38 Identities=13% Similarity=0.283 Sum_probs=22.3
Q ss_pred cccchhhHHHHhhhhcccC--------hhHHHHhhccccchhhhhhhhh
Q 022114 150 EFSGFLLYKELGRRLKKTN--------PVVAEIFSLMSRDEARHAGFLN 190 (302)
Q Consensus 150 EFSGflLyKEl~rrlk~~n--------P~lae~F~lMaRDEARHAGFlN 190 (302)
.-+|.|-|.|...-+.... ..+.++|..+-+| +-|+|+
T Consensus 49 ~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~d---~~G~i~ 94 (140)
T 1ggw_A 49 TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKD---ATGMIG 94 (140)
T ss_dssp TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHHHHHTTCSS---CSSCCC
T ss_pred CCCCcCcHHHHHHHHHHHhcccCcccHHHHHHHHHHhCCC---CCCcEe
Confidence 4467777777655443321 5677888776655 345443
No 224
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=26.47 E-value=73 Score=22.16 Aligned_cols=66 Identities=17% Similarity=0.224 Sum_probs=38.2
Q ss_pred cHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 022114 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (302)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (302)
..+++..+...| |.|+.-++--++|...+..+....-..=++-|.+.+-..=+|.|-|.|..+-+.
T Consensus 22 ~~~~l~~~F~~~--D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~ 87 (105)
T 1wlz_A 22 HYHAITQEFENF--DTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFS 87 (105)
T ss_dssp THHHHHHHHHHH--CTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC
T ss_pred hHHHHHHHHHHH--CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHh
Confidence 345555555555 666667777777776655432211112233344455555678888888877664
No 225
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=25.78 E-value=86 Score=23.88 Aligned_cols=62 Identities=16% Similarity=0.220 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHhhccCCcccccChhHHHHhhc------------CChHHHHHHHHHHHhhhhccccchhhHHHHhh
Q 022114 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADK------------MQGPLRQIFVEFLERSCTAEFSGFLLYKELGR 162 (302)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~------------l~~~~r~~FidFLerScTaEFSGflLyKEl~r 162 (302)
++++..+...| |.|..-++--+||...+.. ++++.-+..++-+-+.+-..=.|.|-|.|..+
T Consensus 67 ~~~l~~~F~~~--D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~ 140 (143)
T 3a4u_B 67 QELQLHYFKMH--DYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAK 140 (143)
T ss_dssp HHHHHHHHHHT--CTTCSSCEEHHHHHHTCC-------------CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC
T ss_pred HHHHHHHHHHh--CCCCCCccCHHHHHHHHHHHHhhhccccCCCCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHH
Confidence 45666666655 6677677777777766544 33333333344444555555567777777654
No 226
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=25.07 E-value=1.3e+02 Score=22.00 Aligned_cols=39 Identities=15% Similarity=0.260 Sum_probs=21.8
Q ss_pred HHHHHhhhhccccchhhHHHHhhhhccc---ChhHHHHhhcc
Q 022114 140 VEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVAEIFSLM 178 (302)
Q Consensus 140 idFLerScTaEFSGflLyKEl~rrlk~~---nP~lae~F~lM 178 (302)
+.-+-+.+-..=+|.|-+.|+.+=++.. ...+.++|..+
T Consensus 107 ~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~~~~~~~~~~~~~ 148 (185)
T 2sas_A 107 IPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVYNVI 148 (185)
T ss_dssp HHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHHHHH
T ss_pred HHHHHHHHcCCCCCeEcHHHHHHHHHHhCCCHHHHHHHHHHh
Confidence 3334444556667888888887766432 23444444444
No 227
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=24.95 E-value=60 Score=20.36 Aligned_cols=25 Identities=16% Similarity=0.204 Sum_probs=15.3
Q ss_pred HHHHHhhhhccccchhhHHHHhhhh
Q 022114 140 VEFLERSCTAEFSGFLLYKELGRRL 164 (302)
Q Consensus 140 idFLerScTaEFSGflLyKEl~rrl 164 (302)
++-+.+.+-..=+|.|-|.|..+-+
T Consensus 38 ~~~~~~~~D~~~~g~i~~~ef~~~~ 62 (66)
T 3li6_A 38 LQLIFKSIDADGNGEIDQNEFAKFY 62 (66)
T ss_dssp HHHHHHHHCTTCSSSCCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 3444445555667777777776654
No 228
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=24.54 E-value=27 Score=27.48 Aligned_cols=70 Identities=10% Similarity=0.104 Sum_probs=32.7
Q ss_pred ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC------hhHHHHhhccccc
Q 022114 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN------PVVAEIFSLMSRD 181 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n------P~lae~F~lMaRD 181 (302)
|.|..-.+--+||...+..+-...-..-++-+.+.+-..=+|.+-|.|...-+.... ..|.+.|...-+|
T Consensus 21 D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~fD~d 96 (176)
T 2lhi_A 21 DKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKN 96 (176)
T ss_dssp CSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHHHHHHHHHHHHHCSS
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCcHHHHHHHHHHhCCC
Confidence 555555555555555444332222223344444555555566666655543332111 1366666655443
No 229
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=24.54 E-value=1.1e+02 Score=20.17 Aligned_cols=53 Identities=8% Similarity=0.047 Sum_probs=34.2
Q ss_pred ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 022114 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrl 164 (302)
|.|..-++--+||...+..+....-..-++-+.+.+-..=+|.|-|.|..+-+
T Consensus 24 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~ 76 (85)
T 2ktg_A 24 DKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTIM 76 (85)
T ss_dssp CTTCCSEEEHHHHHHHHHTTSSCCCHHHHHHHHHHHSSSSCSEEEHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 77777778888888777665433333345555556666667888888765433
No 230
>1i11_A Transcription factor SOX-5; HMG BOX, DNA bending, DNA recognition, chromatin, DNA binding protein, DNA sequence specific, testis determining.; NMR {Mus musculus} SCOP: a.21.1.1
Probab=24.53 E-value=24 Score=25.22 Aligned_cols=14 Identities=29% Similarity=0.724 Sum_probs=8.3
Q ss_pred HHhhhCCCCcccch
Q 022114 239 RHLKANPEFQCYPI 252 (302)
Q Consensus 239 RHLe~~Pe~rf~PI 252 (302)
+|.+.||++++.|-
T Consensus 64 ~~~~~~p~Yky~pr 77 (81)
T 1i11_A 64 QHLEKYPDYKYKPR 77 (81)
T ss_dssp HHHTTCSCC-----
T ss_pred HHHHHCCCCeeccC
Confidence 79999999999883
No 231
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=24.22 E-value=84 Score=20.28 Aligned_cols=62 Identities=18% Similarity=0.199 Sum_probs=35.5
Q ss_pred HHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 022114 101 EFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (302)
Q Consensus 101 E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrl 164 (302)
++..+...+ |.|..-++--+||...+..+....-..-++-+.+.+-..=+|.|-|.|..+-+
T Consensus 8 ~l~~~F~~~--D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~ 69 (77)
T 2joj_A 8 EIKEAFDLF--DTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIM 69 (77)
T ss_dssp HHHHHHHHH--CCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHH
T ss_pred HHHHHHHHh--CCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 334444433 66666667777776665544322233334555555566667888888776654
No 232
>4g5s_E PINS homolog, G-protein-signaling modulator 2; galpha, goloco, galpha signaling, asymmetric cell division, cycle-signaling protein complex; HET: GDP CIT; 3.62A {Mus musculus}
Probab=24.14 E-value=27 Score=22.37 Aligned_cols=17 Identities=47% Similarity=0.704 Sum_probs=12.8
Q ss_pred hhHHHHHHhhCccchhh
Q 022114 267 GDFFSALMKAQPQFLND 283 (302)
Q Consensus 267 GdfFa~lmraqP~ll~g 283 (302)
-|||.+|+|+|-.-+.+
T Consensus 2 d~ff~ml~kcq~srldd 18 (26)
T 4g5s_E 2 EDFFDILVKCQGSRLDD 18 (26)
T ss_dssp -CHHHHHHHHSCCCCSS
T ss_pred hhHHHHHHHhccccccc
Confidence 37999999999765543
No 233
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=24.12 E-value=1.1e+02 Score=21.87 Aligned_cols=81 Identities=16% Similarity=0.247 Sum_probs=47.6
Q ss_pred HHHHHHHHHh-hccCCcccccChhHHHHhhcC--ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc------ChhH
Q 022114 101 EFEALLQEFK-TDYNQTHFVRNKEFKEAADKM--QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT------NPVV 171 (302)
Q Consensus 101 E~~Aml~Efr-~DyNr~HFvR~~eF~~~~d~l--~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~------nP~l 171 (302)
|++.+.+-|+ -|.|+.-.+--+|| ..+..+ .++.+ -+.+.+-..=+|.|-|.|...-+... ...+
T Consensus 4 ~~~~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~~~~~~-----~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 77 (155)
T 3ll8_B 4 EIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPLVQ-----RVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKL 77 (155)
T ss_dssp HHHHHHHHHHHHCTTCSSSBCHHHH-TTSGGGTTCTTHH-----HHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHH
T ss_pred HHHHHHHHHHHhCcCCCCeEcHHHH-HHhhccccchHHH-----HHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHH
Confidence 3344444443 37777777877888 333332 33333 34445566678999998887666432 1567
Q ss_pred HHHhhccccchhhhhhhhh
Q 022114 172 AEIFSLMSRDEARHAGFLN 190 (302)
Q Consensus 172 ae~F~lMaRDEARHAGFlN 190 (302)
.++|..+-+| +-|+|+
T Consensus 78 ~~~F~~~D~d---~~G~i~ 93 (155)
T 3ll8_B 78 RFAFRIYDMD---KDGYIS 93 (155)
T ss_dssp HHHHHHHCTT---CSSCBC
T ss_pred HHHHHHhCCC---CCCcCc
Confidence 8888876554 345554
No 234
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=23.84 E-value=32 Score=27.10 Aligned_cols=67 Identities=16% Similarity=0.183 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc
Q 022114 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (302)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~ 167 (302)
.++++.++..+ |.|..-.+-=+||...+..+.......-+..+-+.+-..=+|+|-..|+.+=++..
T Consensus 92 ~~~~~~l~~~~--D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~ 158 (197)
T 3pm8_A 92 PPDIHQVLRDI--DSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRD 158 (197)
T ss_dssp CHHHHHHHHC---------CEEHHHHHHTTCCHHHHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC--
T ss_pred HHHHHHHHHHh--CCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence 34455555444 33333344445665544333222222223333344567789999999998877643
No 235
>1utg_A Uteroglobin; steroid binding; 1.34A {Oryctolagus cuniculus} SCOP: a.101.1.1 PDB: 2utg_A
Probab=23.75 E-value=63 Score=23.64 Aligned_cols=48 Identities=19% Similarity=0.413 Sum_probs=33.0
Q ss_pred cHHHHHHHHHHHhhccCCcccccC--hhHHHHhhcCChHHHHHHHHHHHhhhhc
Q 022114 98 NQAEFEALLQEFKTDYNQTHFVRN--KEFKEAADKMQGPLRQIFVEFLERSCTA 149 (302)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~--~eF~~~~d~l~~~~r~~FidFLerScTa 149 (302)
..+|..+-+++|..|+. ... .++++..|.|++++|..+..+|++=-.|
T Consensus 17 s~~~Y~~~l~~y~~~~~----~~~A~~~lK~C~d~ls~e~~~~i~~~l~kI~~S 66 (70)
T 1utg_A 17 TPSSYETSLKEFEPDDT----MKDAGMQMKKVLDSLPQTTRENIMKLTEKIVKS 66 (70)
T ss_dssp CHHHHHHHHHTTCCCHH----HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHhcCCCHH----HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHcC
Confidence 34566666665544432 222 2789999999999999999999864433
No 236
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=23.73 E-value=1.5e+02 Score=28.86 Aligned_cols=87 Identities=21% Similarity=0.316 Sum_probs=0.0
Q ss_pred HHHhhhccccccccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC------ChHHHHHHHHHHHhhhhccccchhh
Q 022114 83 DEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM------QGPLRQIFVEFLERSCTAEFSGFLL 156 (302)
Q Consensus 83 d~m~~lf~~eid~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l------~~~~r~~FidFLerScTaEFSGflL 156 (302)
..|..+ .+.+..+|++.|++++ |.|..-.+-=+||...+... ..+.+++|--| -.+=+|+|-
T Consensus 326 ~aLrsL-----G~~~TeeEI~~Lf~~~--D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreAFk~f-----DkDgdG~IS 393 (440)
T 3u0k_A 326 TVMRSL-----GQNPTEAELQDMINEV--DADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVF-----DKDGNGYIS 393 (440)
T ss_dssp HHHHHT-----TCCCCHHHHHHHHHHH--CSSCSSSEEHHHHHHHHHTC------CHHHHHHHHHH-----CTTCSSEEC
T ss_pred HHHHHc-----CCCCCHHHHHHHHHHh--CCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHH-----CCCCcCcCC
Q ss_pred HHHHhhhhcc-----cChhHHHHhhccccc
Q 022114 157 YKELGRRLKK-----TNPVVAEIFSLMSRD 181 (302)
Q Consensus 157 yKEl~rrlk~-----~nP~lae~F~lMaRD 181 (302)
..||.+=++. ...++.++|..+-.|
T Consensus 394 ~eELr~vL~~lGe~LSdeEIdeLfke~D~D 423 (440)
T 3u0k_A 394 AAELRHVMTNLGEKLTDEEVDEMIREADID 423 (440)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHhCCC
No 237
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=23.48 E-value=57 Score=24.40 Aligned_cols=79 Identities=15% Similarity=0.177 Sum_probs=37.2
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCC-hHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccChhHHHHhhcc
Q 022114 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ-GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLM 178 (302)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~-~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP~lae~F~lM 178 (302)
+++..+...+ |.|+.-.+--+||...+..+. ......-++-+.+.+-..=+|.|-|.|...-+. .-..+.++|..+
T Consensus 7 ~~l~~~F~~~--D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~-~~~~~~~~F~~~ 83 (172)
T 2znd_A 7 SFLWNVFQRV--DKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWK-YITDWQNVFRTY 83 (172)
T ss_dssp HHHHHHHHHH--CTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHH-HHHHHHHHHHHH
T ss_pred hHHHHHHHHh--CCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHH-HHHHHHHHHHHH
Confidence 3444444443 444555566666665554332 111112223333344444566666666554432 224566666655
Q ss_pred ccc
Q 022114 179 SRD 181 (302)
Q Consensus 179 aRD 181 (302)
-+|
T Consensus 84 D~d 86 (172)
T 2znd_A 84 DRD 86 (172)
T ss_dssp CTT
T ss_pred CCC
Confidence 443
No 238
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=23.45 E-value=1.3e+02 Score=22.01 Aligned_cols=73 Identities=18% Similarity=0.231 Sum_probs=39.0
Q ss_pred HHHHHHhhccCCcccccChhHHHHhhcC---ChH-----HHHHHHHHHHhhhhccccchhhHHHHhhhhccc---ChhHH
Q 022114 104 ALLQEFKTDYNQTHFVRNKEFKEAADKM---QGP-----LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVA 172 (302)
Q Consensus 104 Aml~Efr~DyNr~HFvR~~eF~~~~d~l---~~~-----~r~~FidFLerScTaEFSGflLyKEl~rrlk~~---nP~la 172 (302)
.++..+ |.|..-.+--+||...+..+ ++. ..+..+.-+-+.+-..=+|.|-..|+.+=++.. ...+.
T Consensus 62 ~lf~~~--D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~ 139 (176)
T 1nya_A 62 YLAKEA--GVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAA 139 (176)
T ss_dssp HHHHHH--TSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHh--CCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhCCCHHHHH
Confidence 444444 55555667667776554432 111 112334444445566778999999987766432 22344
Q ss_pred HHhhcc
Q 022114 173 EIFSLM 178 (302)
Q Consensus 173 e~F~lM 178 (302)
++|..+
T Consensus 140 ~~~~~~ 145 (176)
T 1nya_A 140 EAFNQV 145 (176)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 444444
No 239
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=23.42 E-value=79 Score=21.95 Aligned_cols=76 Identities=18% Similarity=0.270 Sum_probs=39.1
Q ss_pred ccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC---ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc-------
Q 022114 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM---QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK------- 166 (302)
Q Consensus 97 ~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l---~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~------- 166 (302)
+..+|++.|++++-. .-.+-=+||...+... ..+.++.|- .+-..=+|+|-..|+.+=++.
T Consensus 6 ~s~~ei~~~~~~~d~----~g~i~~~eF~~~~~~~~~~~~~l~~~F~-----~~D~d~~G~i~~~el~~~l~~~~~~g~~ 76 (109)
T 5pal_A 6 LKADDINKAISAFKD----PGTFDYKRFFHLVGLKGKTDAQVKEVFE-----ILDKDQSGFIEEEELKGVLKGFSAHGRD 76 (109)
T ss_dssp SCHHHHHHHHHHTCS----TTCCCHHHHHHHHTCTTCCHHHHHHHHH-----HHCTTCSSEECHHHHHTHHHHHCTTCCC
T ss_pred CCHHHHHHHHHHhCC----CCcCcHHHHHHHHhhccCcHHHHHHHHH-----HHCCCCCCcCcHHHHHHHHHHHHHcCCC
Confidence 345667777776643 1123334565544321 122334443 335556777777777655432
Q ss_pred -cChhHHHHhhccccc
Q 022114 167 -TNPVVAEIFSLMSRD 181 (302)
Q Consensus 167 -~nP~lae~F~lMaRD 181 (302)
....+.++|..+-.|
T Consensus 77 ~~~~~~~~~~~~~D~~ 92 (109)
T 5pal_A 77 LNDTETKALLAAGDSD 92 (109)
T ss_dssp CCHHHHHHHHHHHCTT
T ss_pred CCHHHHHHHHHHhCCC
Confidence 234566666665444
No 240
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=23.37 E-value=2.5e+02 Score=21.53 Aligned_cols=68 Identities=12% Similarity=0.084 Sum_probs=39.8
Q ss_pred cccHHHHHHHH-------HHHhhccCCcccccChhHHHHhh---------cC--ChHHHHHHHHHHHhhhhccccchhhH
Q 022114 96 KLNQAEFEALL-------QEFKTDYNQTHFVRNKEFKEAAD---------KM--QGPLRQIFVEFLERSCTAEFSGFLLY 157 (302)
Q Consensus 96 ~~~r~E~~Aml-------~Efr~DyNr~HFvR~~eF~~~~d---------~l--~~~~r~~FidFLerScTaEFSGflLy 157 (302)
.+..++++.|+ ..+ |.|..-.+--+||...+. .+ +++..+..+.-+-+.+-..=+|+|-.
T Consensus 70 ~~~~~~~~~l~~~~~~lf~~~--D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~ 147 (208)
T 2hpk_A 70 NATDEQVEKMRDAVRVFFLHK--GVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDV 147 (208)
T ss_dssp CCCHHHHHHHHHHHHHHHHHT--TCBTTTBEEGGGHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCH
T ss_pred CCCHHHHHHHHHHHHHHHHHh--CCCCCCeEcHHHHHHHHHHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCH
Confidence 34456666666 433 555556677778866543 22 33333343444444556677888888
Q ss_pred HHHhhhhc
Q 022114 158 KELGRRLK 165 (302)
Q Consensus 158 KEl~rrlk 165 (302)
.|+.+=++
T Consensus 148 ~El~~~l~ 155 (208)
T 2hpk_A 148 DELKTMMK 155 (208)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877664
No 241
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=23.31 E-value=78 Score=25.24 Aligned_cols=15 Identities=13% Similarity=0.027 Sum_probs=8.0
Q ss_pred cccchhhHHHHhhhh
Q 022114 150 EFSGFLLYKELGRRL 164 (302)
Q Consensus 150 EFSGflLyKEl~rrl 164 (302)
.=+|+|-..|+.+=+
T Consensus 142 d~~G~Is~~El~~~l 156 (219)
T 3cs1_A 142 SGNMLVDEEEFKRAV 156 (219)
T ss_dssp SSSSEEEHHHHHHHH
T ss_pred CCCCcCcHHHHHHHH
Confidence 345666555555443
No 242
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=23.10 E-value=90 Score=23.70 Aligned_cols=46 Identities=9% Similarity=0.177 Sum_probs=27.2
Q ss_pred ccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHH
Q 022114 95 KKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEF 142 (302)
Q Consensus 95 ~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidF 142 (302)
.....+|+++|+.++ |.|..-.+-=+||...+....++.++.|--|
T Consensus 81 ~~~~~~e~~~l~~~~--D~d~dg~I~~~eF~~~~~~~~~~i~~aF~~~ 126 (150)
T 2jjz_A 81 VPKTHLEMKKMISEV--TGGVSDTISYRDFVNMMLGKRSAVLKLVMMF 126 (150)
T ss_dssp CCCCHHHHHHHHHHH--HTTSCSSBCHHHHHHHHHSSSCCHHHHHHC-
T ss_pred CCCCHHHHHHHHHHH--CCCCCCcEeHHHHHHHHHHhHHHHHHHHHHH
Confidence 344566777777766 4444445666677666666566666666533
No 243
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=22.85 E-value=78 Score=22.50 Aligned_cols=82 Identities=12% Similarity=0.329 Sum_probs=43.5
Q ss_pred HHHHHHHHHh-hccCCcccccChhHHHHhhcCChH-HHHHHHHHHHhhhhccccchhhHHHHhhhhccc------ChhHH
Q 022114 101 EFEALLQEFK-TDYNQTHFVRNKEFKEAADKMQGP-LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT------NPVVA 172 (302)
Q Consensus 101 E~~Aml~Efr-~DyNr~HFvR~~eF~~~~d~l~~~-~r~~FidFLerScTaEFSGflLyKEl~rrlk~~------nP~la 172 (302)
+++.+.+-|+ -|.|+.-.+--+||...+..+... ...++...+.. -+|.|-|.|...-+... ...+.
T Consensus 5 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-----~~g~i~~~eF~~~~~~~~~~~~~~~~l~ 79 (143)
T 3j04_B 5 QIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE-----APGPINFTMFLTMFGEKLNGTDPEDVIR 79 (143)
T ss_dssp HHHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTT-----SSSCCCHHHHHHHHHHTTTSSCCHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHh-----CCCCcCHHHHHHHHHHHhccCCcHHHHH
Confidence 4444444443 266666667777776655544211 22222222221 57788787765544321 24578
Q ss_pred HHhhccccchhhhhhhhh
Q 022114 173 EIFSLMSRDEARHAGFLN 190 (302)
Q Consensus 173 e~F~lMaRDEARHAGFlN 190 (302)
++|..+-+| +-|+|+
T Consensus 80 ~~F~~~D~d---~~G~I~ 94 (143)
T 3j04_B 80 NAFACFDEE---ASGFIH 94 (143)
T ss_dssp HHHTTSCSS---SCCCCC
T ss_pred HHHHHHCCC---CCCeEc
Confidence 888877655 346554
No 244
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=22.63 E-value=83 Score=22.96 Aligned_cols=53 Identities=17% Similarity=0.131 Sum_probs=28.8
Q ss_pred ccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 022114 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrl 164 (302)
|.|..-++--+||...+..+-...-..=++-+.+.+-..=.|.|-|.|..+-+
T Consensus 89 D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~ 141 (143)
T 2obh_A 89 DDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 141 (143)
T ss_dssp CTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 77777778888887766544211111112222233344457888888776544
No 245
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=22.31 E-value=1.7e+02 Score=22.02 Aligned_cols=101 Identities=10% Similarity=0.085 Sum_probs=0.0
Q ss_pred ChHHHhhhccccc---cccccHHHHHHHHHHH---------hhccCCcccccChhHHHHhhcCC---------hHHHHHH
Q 022114 81 DFDEMETLFNTEI---NKKLNQAEFEALLQEF---------KTDYNQTHFVRNKEFKEAADKMQ---------GPLRQIF 139 (302)
Q Consensus 81 DFd~m~~lf~~ei---d~~~~r~E~~Aml~Ef---------r~DyNr~HFvR~~eF~~~~d~l~---------~~~r~~F 139 (302)
+.+++.++...-. ...+..++++.+++.+ ..|.|..-.+--+||...+..+. ++..+..
T Consensus 31 ~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~ 110 (191)
T 2ccm_A 31 EWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKY 110 (191)
T ss_dssp CHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred eHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHHHHHHhccccchhhchHHHHHH
Q ss_pred HHHHHhhhhccccchhhHHHHhhhhcccC---hhHHHHhhccccc
Q 022114 140 VEFLERSCTAEFSGFLLYKELGRRLKKTN---PVVAEIFSLMSRD 181 (302)
Q Consensus 140 idFLerScTaEFSGflLyKEl~rrlk~~n---P~lae~F~lMaRD 181 (302)
+.-+-+.+-..=+|.|-+.|+.+=++..+ ..+.++|..+-.|
T Consensus 111 ~~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~~~~D~d 155 (191)
T 2ccm_A 111 MNFMFDVNDTSGDNIIDKHEYSTVYMSYGIPKSDCDAAFDTLSDG 155 (191)
T ss_dssp HHHHHHHHCTTCSSBCCHHHHHHHHHTTTCCHHHHHHHHHHHTTT
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCHHHHHHHHHHhCCC
No 246
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=22.09 E-value=86 Score=28.38 Aligned_cols=75 Identities=19% Similarity=0.328 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHhhccCCcccccChhHHHHhhcC-----ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc---Chh
Q 022114 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-----QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---NPV 170 (302)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-----~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~---nP~ 170 (302)
.++++.|++++ |.|..-.+--+||...+... ..+.++.|-. +-..=+|.+-..|+.+-++.. ..+
T Consensus 398 ~~~~~~~~~~~--D~d~dG~I~~~EF~~~~~~~~~~~~~~~~~~~F~~-----~D~d~dG~Is~~El~~~l~~~~~~~~~ 470 (504)
T 3q5i_A 398 EEEVDNILKEV--DFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNL-----FDTDKSGKITKEELANLFGLTSISEKT 470 (504)
T ss_dssp HHHHHHHHHHH--CTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHH-----HCTTCCSEECHHHHHHHTTCSCCCHHH
T ss_pred HHHHHHHHHHh--CCCCCCcEeHHHHHHHHHhhhcccCHHHHHHHHHH-----hcCCCCCcCcHHHHHHHHhhCCCCHHH
Confidence 34555555554 44455556666776655433 2344444443 356678999999988776532 234
Q ss_pred HHHHhhcccc
Q 022114 171 VAEIFSLMSR 180 (302)
Q Consensus 171 lae~F~lMaR 180 (302)
+.++|.-+-.
T Consensus 471 ~~~~~~~~D~ 480 (504)
T 3q5i_A 471 WNDVLGEADQ 480 (504)
T ss_dssp HHHHHHTTCS
T ss_pred HHHHHHHhCC
Confidence 5555554443
No 247
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=21.81 E-value=93 Score=28.05 Aligned_cols=73 Identities=19% Similarity=0.289 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHhhccCCcccccChhHHHHhhcC-----ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc---cChh
Q 022114 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-----QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK---TNPV 170 (302)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-----~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~---~nP~ 170 (302)
.++++.|++++ |.|..-.+--+||...+... ..+.++.|-. +-..=+|.+-..|+.+=++. ...+
T Consensus 389 ~~~~~~~~~~~--D~d~~G~I~~~EF~~~~~~~~~~~~~~~~~~~F~~-----~D~d~~G~Is~~El~~~l~~~~~~~~~ 461 (494)
T 3lij_A 389 ESEVDAILGAA--DFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQK-----FDQDGNGKISVDELASVFGLDHLESKT 461 (494)
T ss_dssp HHHHHHHHHHH--CTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHH-----HCTTCSSEECHHHHHHHC-CCSCCCHH
T ss_pred HHHHHHHHHHh--CCCCCCcCcHHHHHHHHHhhhccccHHHHHHHHHH-----HCCCCCCcCCHHHHHHHHHhcCCCHHH
Confidence 55666666655 55555566667776654332 2234444443 35566888888888876643 1233
Q ss_pred HHHHhhcc
Q 022114 171 VAEIFSLM 178 (302)
Q Consensus 171 lae~F~lM 178 (302)
+.++|.-+
T Consensus 462 ~~~~~~~~ 469 (494)
T 3lij_A 462 WKEMISGI 469 (494)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 44444443
No 248
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=21.77 E-value=92 Score=24.66 Aligned_cols=61 Identities=15% Similarity=0.253 Sum_probs=41.8
Q ss_pred cccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 022114 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (302)
Q Consensus 96 ~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk 165 (302)
.+..+|++.|++++-. |..-.+.=+||...+..+ .+.++.|--| - .=+|++-.+||+.=++
T Consensus 42 ~~~~~~~~~l~~~~D~--d~~G~I~f~EF~~~~~~~-~~l~~aF~~f-----D-d~~G~I~~~El~~~l~ 102 (174)
T 2i7a_A 42 MFSLDECRSLVALMEL--KVNGRLDQEEFARLWKRL-VHYQHVFQKV-----Q-TSPGVLLSSDLWKAIE 102 (174)
T ss_dssp CCCHHHHHHHHHHHCS--SCSSEECHHHHHHHHHHH-HHHHHHHHHH-----C-SBTTBEEGGGHHHHHH
T ss_pred CCCHHHHHHHHHHHCC--CCCCcCCHHHHHHHHHHH-HHHHHHHHHh-----c-CCCCcCCHHHHHHHHH
Confidence 3446788888888744 444456667887776654 4567777654 5 6689998888877664
No 249
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=21.73 E-value=1.4e+02 Score=20.12 Aligned_cols=63 Identities=17% Similarity=0.292 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 022114 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (302)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrl 164 (302)
+++..+...+ |.|..-++--++|...+..+....-..=++-|.+.+-..=+|.|-|.|...-+
T Consensus 9 ~~l~~~F~~~--D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~ 71 (92)
T 2kn2_A 9 EELKEAFKVF--DKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 71 (92)
T ss_dssp HHHHHHHHHH--CTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHH
T ss_pred HHHHHHHHHH--CCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 3444444444 55555566666676655554322222223334444555557777777765443
No 250
>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A*
Probab=21.71 E-value=49 Score=25.96 Aligned_cols=58 Identities=17% Similarity=0.178 Sum_probs=46.4
Q ss_pred HHHHHhhhhccccchhhHHHHhhhhcc-cChhHHHHhhccccchhhhhhhhhhhhcccc
Q 022114 140 VEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGFLNKGLSDFN 197 (302)
Q Consensus 140 idFLerScTaEFSGflLyKEl~rrlk~-~nP~lae~F~lMaRDEARHAGFlNkal~Df~ 197 (302)
.+-|+.....|-...-.|+++.+-..+ ..|.++.++.-+.++|-.|+-.|...+...+
T Consensus 86 ~e~l~~al~~E~~~~~~y~~l~~~a~~~~D~~t~~~l~~~l~eEe~h~~~l~~~l~~i~ 144 (174)
T 3qb9_A 86 REQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMD 144 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666777787778889988865433 5899999999999999999999998876543
No 251
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=21.58 E-value=84 Score=23.38 Aligned_cols=34 Identities=12% Similarity=0.226 Sum_probs=21.6
Q ss_pred cccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC
Q 022114 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM 131 (302)
Q Consensus 96 ~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l 131 (302)
....+|++.|+.++ |.|..-.+--+||...+..+
T Consensus 73 ~~~~~e~~~~~~~~--D~d~dG~I~~~EF~~~~~~~ 106 (135)
T 3h4s_E 73 GMSKEDAQGMVREG--DLDGDGALNQTEFCVLMVRL 106 (135)
T ss_dssp CCCHHHHHHHHHHH--CSSCSSSBCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHh--CCCCCCCCcHHHHHHHHHHh
Confidence 45667888888876 44444445556676655544
No 252
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=21.55 E-value=1.1e+02 Score=23.44 Aligned_cols=18 Identities=22% Similarity=0.233 Sum_probs=9.7
Q ss_pred hccccchhhHHHHhhhhc
Q 022114 148 TAEFSGFLLYKELGRRLK 165 (302)
Q Consensus 148 TaEFSGflLyKEl~rrlk 165 (302)
-..=||++-..||++=++
T Consensus 95 D~d~~G~I~~~el~~~l~ 112 (153)
T 3i5g_B 95 DEDGQGFIPEDYLKDLLE 112 (153)
T ss_dssp CSSCSSCCCHHHHHHHHH
T ss_pred ccCCCCeEeHHHHHHHHH
Confidence 344456666666655443
No 253
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=21.36 E-value=1.2e+02 Score=29.83 Aligned_cols=93 Identities=16% Similarity=0.224 Sum_probs=0.0
Q ss_pred ChHHHhhhccccc-------cccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccc
Q 022114 81 DFDEMETLFNTEI-------NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSG 153 (302)
Q Consensus 81 DFd~m~~lf~~ei-------d~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSG 153 (302)
|.+++.++++.-+ ......++++.|++++ |.|..-.+-=+||...+..+ .+.++.|-.| -..=+|
T Consensus 549 s~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~--D~d~~G~I~f~EF~~l~~~~-~~l~~~F~~~-----D~d~dG 620 (714)
T 3bow_A 549 SAFELQTILRRVLAKREDIKSDGFSIETCKIMVDML--DEDGSGKLGLKEFYILWTKI-QKYQKIYREI-----DVDRSG 620 (714)
T ss_dssp CHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHH--CCSSCSSBCHHHHHHHHHHH-HHHHHHHHHH-----CTTCCS
T ss_pred CHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHh--CCCCCCcCcHHHHHHHHHHH-HHHHHHHHHh-----CCCCCC
Q ss_pred hhhHHHHhhhhcc-----cChhHHHHhhccccch
Q 022114 154 FLLYKELGRRLKK-----TNPVVAEIFSLMSRDE 182 (302)
Q Consensus 154 flLyKEl~rrlk~-----~nP~lae~F~lMaRDE 182 (302)
.|-..|+.+=++. .+.++.++|..+. |.
T Consensus 621 ~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~ 653 (714)
T 3bow_A 621 TMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DD 653 (714)
T ss_dssp SEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CT
T ss_pred eECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CC
No 254
>1syy_A Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune EVAS replication, oxidoreductase; 1.70A {Chlamydia trachomatis} SCOP: a.25.1.2 PDB: 4d8g_A 4d8f_A 2ani_A
Probab=21.09 E-value=78 Score=28.76 Aligned_cols=151 Identities=17% Similarity=0.157 Sum_probs=79.1
Q ss_pred HHhh--cCChHHHHHHHHHHHhhhhcc-ccchhhHHHHhhhhcccChhHHHHhhccccchhhhhhhhhhhhcccccc---
Q 022114 126 EAAD--KMQGPLRQIFVEFLERSCTAE-FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYA--- 199 (302)
Q Consensus 126 ~~~d--~l~~~~r~~FidFLerScTaE-FSGflLyKEl~rrlk~~nP~lae~F~lMaRDEARHAGFlNkal~Df~l~--- 199 (302)
++|. +|+++.|..+.-=|--=..++ ..|-.+-..+..-+ ++|++...+...+-.|++|+-.-..-+.-++..
T Consensus 63 ~dw~~~~Lt~~Er~~~~~~l~~~~~~D~iv~~~~~~~l~~~v--~~~E~~~~l~~q~~~EaiHs~sYs~il~tl~~~~~e 140 (346)
T 1syy_A 63 ELWKSDRLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHV--TNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKE 140 (346)
T ss_dssp HHHHSSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHH
T ss_pred HHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
Confidence 4677 899988887654332211111 11222222344555 589999999999999999987766666555432
Q ss_pred -----cccccccccC-----ccccc-c-----------chhh-hhhh--hhccccc-hhhHHHHHHHhhhCCCCcccchh
Q 022114 200 -----LDLGFLTKAR-----KYTFF-K-----------PKFI-FYAT--YLSEKIG-YWRYITIYRHLKANPEFQCYPIF 253 (302)
Q Consensus 200 -----lDLgfLtk~k-----~YTfF-~-----------PkfI-fYAt--YLSEKIG-YwRYItIyRHLe~~Pe~rf~PIF 253 (302)
.+...|.|+- -|.=+ . ..+. =+.. .+-|.|= |-=|-.|| .|.++. ..--+=
T Consensus 141 ~f~~~~~~p~l~~k~~~i~~~y~~~~~~~~~~~~~~~~~~~~~~lva~~~~lEGi~FysgF~~~~-~l~~~g--~m~g~~ 217 (346)
T 1syy_A 141 IFNAYNERAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMIL-SFHRQN--KMIGIG 217 (346)
T ss_dssp HTTHHHHCHHHHHHHHHHHHTTSGGGSTTCCSSSHHHHHHHHHHHHHHHTTTTTTHHHHHHHHHH-HHHHTT--SSHHHH
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCC--CchhHH
Confidence 1223332211 12111 0 1111 0111 2456662 23333443 444442 222222
Q ss_pred hhhHhhhhccccchhHHHHHHh----hCccch
Q 022114 254 KYFENWCQDENRHGDFFSALMK----AQPQFL 281 (302)
Q Consensus 254 k~Fe~WCqDEnRHGdfFa~lmr----aqP~ll 281 (302)
+=.+-=+.||.+||+|...+++ ..|++.
T Consensus 218 ~~i~~I~RDE~~H~~f~~~l~~~~~~e~p~~~ 249 (346)
T 1syy_A 218 EQYQYILRDETIHLNFGIDLINGIKEENPEIW 249 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCChhh
Confidence 2234446799999999988765 467754
No 255
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=21.07 E-value=52 Score=28.13 Aligned_cols=59 Identities=17% Similarity=0.199 Sum_probs=43.3
Q ss_pred HHHHhhhhcc-ccchhhHHHHhhhhccc-ChhHHHHhhccccchhhhhhhhhhhhcccccc
Q 022114 141 EFLERSCTAE-FSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYA 199 (302)
Q Consensus 141 dFLerScTaE-FSGflLyKEl~rrlk~~-nP~lae~F~lMaRDEARHAGFlNkal~Df~l~ 199 (302)
+=|+.+.-.| .----.|.++.+.-+.. +..++..|..++++|.+|+.-+.+.|.....+
T Consensus 106 enL~~a~~gE~~E~t~my~~~a~~A~eEgd~~~a~~f~~i~~~E~~H~~~~~~ll~~l~~~ 166 (202)
T 1yuz_A 106 LNLISGANGEIYETSDMYPAFIRKAQEEGNSKAVHVFTRAKLAESVHAERYLAAYNDIDAP 166 (202)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3344445555 44445677666655444 89999999999999999999999999876544
No 256
>1o9r_A Agrobacterium tumefaciens DPS; iron-binding protein, DNA protection from oxidative damage, DNA-binding, iron- binding protein; 1.45A {Agrobacterium tumefaciens} SCOP: a.25.1.1 PDB: 3ge4_A*
Probab=21.06 E-value=1.1e+02 Score=24.43 Aligned_cols=140 Identities=13% Similarity=0.136 Sum_probs=94.3
Q ss_pred hcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-hhHHHHhhccccchhhhhhhhhhhhccccccccccc--c
Q 022114 129 DKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF--L 205 (302)
Q Consensus 129 d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~n-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf--L 205 (302)
..|+++.++.-++.|-.-...|+...+-|+--...++..+ -.|.+.|.-.+-+|..||--|-.-+...|-.-+... +
T Consensus 8 ~~l~~~~~~~vi~~Ln~~La~~~~l~~q~~~~hw~v~G~~f~~lh~~~ee~~~e~~~~aD~lAERI~~LGg~P~~~~~~~ 87 (162)
T 1o9r_A 8 NDLPSNAKSTVIGILNESLASVIDLALVTKQAHWNLKGPQFIAVHELLDTFRTQLDNHGDTIAERVVQLGGTALGSLQAV 87 (162)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheECcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHH
Confidence 3578889999999999999999999999999999995542 348889999999999999999999999988777652 1
Q ss_pred cc---cCccc--cccchhhhhhhhhccccchhhHHHHHHHh----hhCCCCcccchhhhhHhhhhccccchhHHHHHHh
Q 022114 206 TK---ARKYT--FFKPKFIFYATYLSEKIGYWRYITIYRHL----KANPEFQCYPIFKYFENWCQDENRHGDFFSALMK 275 (302)
Q Consensus 206 tk---~k~YT--fF~PkfIfYAtYLSEKIGYwRYItIyRHL----e~~Pe~rf~PIFk~Fe~WCqDEnRHGdfFa~lmr 275 (302)
.+ -+.+. ...++=++=..-= ++.-.|.-||-. +..-+ +.-=+.++.+..|+-.|-+++.+.+.
T Consensus 88 ~~~s~i~e~~~~~~~~~eml~~~l~----~~~~~i~~~r~~i~~a~~~~D---~~T~dll~~il~~~Ek~~w~L~a~l~ 159 (162)
T 1o9r_A 88 SSTTKLKAYPTDIYKIHDHLDALIE----RYGEVANMIRKAIDDSDEAGD---PTTADIFTAASRDLDKSLWFLEAHVQ 159 (162)
T ss_dssp HHHCCSCCCCSSCCBHHHHHHHHHH----HHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HhHCCCCCCCCCCCCHHHHHHHHHH----HHHHHHHHHHHHHHHHhhCCC---HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11 12221 1223322222111 233344444443 22222 33445667788888888777766554
No 257
>2a9g_A Arginine deiminase; arginine degradation pathway, catalyti mechanism, hydrolase; HET: ARG; 2.30A {Pseudomonas aeruginosa} SCOP: d.126.1.4 PDB: 1rxx_A 2abr_A* 2aci_A 2aaf_A*
Probab=21.02 E-value=1.2e+02 Score=28.27 Aligned_cols=85 Identities=11% Similarity=0.094 Sum_probs=55.5
Q ss_pred ccccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCh--h
Q 022114 93 INKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNP--V 170 (302)
Q Consensus 93 id~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~~~r~~FidFLerScTaEFSGflLyKEl~rrlk~~nP--~ 170 (302)
++++..++|++++.+-+|.-.=.-|... +-..+.++ +++.|+.|+|....... + |--+.++++.-+..-.| +
T Consensus 46 ~~~~~A~~Ehd~f~~~Lr~~GV~V~~l~-~ll~e~l~--~~~~r~~~~~~~~~~~~--~-~~~~~~~~~~~l~~~~~~~l 119 (418)
T 2a9g_A 46 IWVNQAKRDHFDFVTKMRERGIDVLEMH-NLLTETIQ--NPEALKWILDRKITADS--V-GLGLTSELRSWLESLEPRKL 119 (418)
T ss_dssp CCHHHHHHHHHHHHHHHTTTTCEEEEHH-HHHHHHHT--SHHHHHHHHHHHSSTTT--T-CTTTHHHHHHHHHHSCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEch-HHHHHHhc--CHHHHHHHHHHHhhhcc--c-chHHHHHHHHHHHcCCHHHH
Confidence 4788899999999999998665555544 23455566 58999999999776433 3 66666777766654322 2
Q ss_pred HHHHhhccccchh
Q 022114 171 VAEIFSLMSRDEA 183 (302)
Q Consensus 171 lae~F~lMaRDEA 183 (302)
+.-+..=+.++|-
T Consensus 120 ~~~~~~g~~~~e~ 132 (418)
T 2a9g_A 120 AEYLIGGVAADDL 132 (418)
T ss_dssp HHHHHHCBCGGGS
T ss_pred HHHHHcCCCHHHc
Confidence 2223334455553
No 258
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=21.01 E-value=95 Score=22.30 Aligned_cols=11 Identities=9% Similarity=0.347 Sum_probs=5.8
Q ss_pred hHHHHhhcccc
Q 022114 170 VVAEIFSLMSR 180 (302)
Q Consensus 170 ~lae~F~lMaR 180 (302)
.+.++|..+-+
T Consensus 85 ~l~~~F~~~D~ 95 (146)
T 2qac_A 85 ELIKMFAHFDN 95 (146)
T ss_dssp HHHHHHHTTCT
T ss_pred HHHHHHHHhCC
Confidence 45556655544
No 259
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=20.97 E-value=47 Score=21.12 Aligned_cols=19 Identities=16% Similarity=0.228 Sum_probs=8.7
Q ss_pred ccCCcccccChhHHHHhhc
Q 022114 112 DYNQTHFVRNKEFKEAADK 130 (302)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~ 130 (302)
|.|+.-.+--+||...+..
T Consensus 16 D~d~~G~i~~~el~~~l~~ 34 (71)
T 2b1u_A 16 DQDGDGHITVDELRRAMAG 34 (71)
T ss_dssp CCSSSSEEEHHHHHHHGGG
T ss_pred CCCCCCcCcHHHHHHHHHH
Confidence 4444444444455444443
No 260
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=20.77 E-value=1.8e+02 Score=22.23 Aligned_cols=28 Identities=18% Similarity=0.278 Sum_probs=12.8
Q ss_pred hHHHhhhccccccccccHHHHHHHHHHH
Q 022114 82 FDEMETLFNTEINKKLNQAEFEALLQEF 109 (302)
Q Consensus 82 Fd~m~~lf~~eid~~~~r~E~~Aml~Ef 109 (302)
.+.+-+.+..+-|-...-+||-+++...
T Consensus 63 ~~~l~~~~D~d~dg~i~~~EF~~~~~~~ 90 (202)
T 2bec_A 63 GDRIIESFFPDGSQRVDFPGFVRVLAHF 90 (202)
T ss_dssp HHHHHHTTSCSSCCCCCHHHHHHHHGGG
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHh
Confidence 3444443333333334556666665443
No 261
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=20.73 E-value=1.1e+02 Score=29.18 Aligned_cols=99 Identities=15% Similarity=0.190 Sum_probs=0.0
Q ss_pred ChHHHhhhccccccccccHHHHHHHHHHHhhccCCcccccChhHHHHhhcC-ChHHHHHHHHHHHhhhhccccchhhHHH
Q 022114 81 DFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-QGPLRQIFVEFLERSCTAEFSGFLLYKE 159 (302)
Q Consensus 81 DFd~m~~lf~~eid~~~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-~~~~r~~FidFLerScTaEFSGflLyKE 159 (302)
+.+++.++++. +......++++.|++++ |.|..-.+-=+||...|..+ .......-+.-+-+.+-..=+|+|-..|
T Consensus 330 s~~EL~~~L~~-lg~~~s~eel~~Lf~~~--D~DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~aFk~fD~D~dG~Is~eE 406 (450)
T 3sg6_A 330 TTKELGTVMRS-LGQNPTEAELQDMINEV--DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 406 (450)
T ss_dssp CHHHHHHHHHH-TTCCCCHHHHHHHHHTT--CTTSSSSEEHHHHHHHHHC------CHHHHHHHHHHHCTTCSSEECHHH
T ss_pred cHHHHHHHHHH-hCCCCCHHHHHHHHHHh--ccCCCCcccHHHHHHHHHhhccccchhhHHHHHHHHhCCCCCCeEeHHH
Q ss_pred HhhhhcccC-----hhHHHHhhccccch
Q 022114 160 LGRRLKKTN-----PVVAEIFSLMSRDE 182 (302)
Q Consensus 160 l~rrlk~~n-----P~lae~F~lMaRDE 182 (302)
+.+=++..+ .++.++|..+..|.
T Consensus 407 Lr~~L~~lG~~ls~eei~~Lf~~~D~D~ 434 (450)
T 3sg6_A 407 LRHVMTNLGEKLTDEEVDEMIREADIDG 434 (450)
T ss_dssp HHHHHHHHTCCCCHHHHHHHHHHHCTTS
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHhCCCC
No 262
>1ccd_A Clara cell 17 KD protein; phospholipase A2 inhibitor; 3.00A {Rattus rattus} SCOP: a.101.1.1
Probab=20.30 E-value=74 Score=23.76 Aligned_cols=46 Identities=22% Similarity=0.398 Sum_probs=30.9
Q ss_pred cHHHHHHHHHHHhhccCCcccccC--hhHHHHhhcCChHHHHHHHHHHHhhh
Q 022114 98 NQAEFEALLQEFKTDYNQTHFVRN--KEFKEAADKMQGPLRQIFVEFLERSC 147 (302)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~--~eF~~~~d~l~~~~r~~FidFLerSc 147 (302)
..+|..+-+++|..|+. ... .++++..|.|++++|..+..+|++=-
T Consensus 19 s~~~Y~~~l~~y~~~~~----a~eA~~~lK~C~D~ls~e~r~~i~~~l~kI~ 66 (77)
T 1ccd_A 19 SESNYEAALKPFNPASD----LQNAGTQLKRLVDTLPQETRINIVKLTEKIL 66 (77)
T ss_dssp CHHHHHHHHTTTCCCHH----HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCCHH----HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 33455555554433322 222 26899999999999999999998643
No 263
>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1
Probab=20.02 E-value=61 Score=24.65 Aligned_cols=57 Identities=28% Similarity=0.325 Sum_probs=46.4
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcc-cChhHHHHhhccccchhhhhhhhhhhhcc
Q 022114 139 FVEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGFLNKGLSD 195 (302)
Q Consensus 139 FidFLerScTaEFSGflLyKEl~rrlk~-~nP~lae~F~lMaRDEARHAGFlNkal~D 195 (302)
-.+-|+.....|-...-.|+++.+...+ ..|.++.++.-+..+|-.|+-++...|..
T Consensus 83 ~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~ee~~h~~~l~~~l~~ 140 (161)
T 1jgc_A 83 PRETLECDLAGEHDALKLYREARDYCAEVGDIVSKNIFESLITDEEGHVDFLETQISL 140 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456667777787788889998876644 58999999999999999999999987764
Done!