BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022115
(302 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q04X87|SYH_LEPBL Histidine--tRNA ligase OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain L550) GN=hisS PE=3 SV=1
Length = 439
Score = 164 bits (416), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 126/202 (62%), Gaps = 2/202 (0%)
Query: 75 PPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD-QLY 133
P KGTRDF PE+MRLRNW+F +E FG+EE D P+LES L+ K+GEEI + QLY
Sbjct: 12 PYKGTRDFYPEEMRLRNWMFSIMRETVLSFGYEEYDGPILESFDLYKAKSGEEIVERQLY 71
Query: 134 CFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQW 193
F D+G RRVA+RPE+TP+LAR+V +++ P++WF++ WRYE+ +GR REH+Q
Sbjct: 72 DFIDKGERRVAIRPEMTPTLARMVAGNLRNLPRPVRWFSIPNLWRYEQPGKGRLREHWQL 131
Query: 194 NMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCH-SIPEHLFG 252
N+D+ GV AE E++ + K+ G ++S RK+L L+ + +H
Sbjct: 132 NVDLFGVDTHRAELEILLMADSILKKFGAPTGSYQIKVSHRKLLDSFLKNSLKLSDHQVH 191
Query: 253 KVCIIIDKIEKLPLDVIKNDLK 274
V ++DK K+ + + ++K
Sbjct: 192 GVSKLLDKKSKISPETFEAEIK 213
>sp|Q04WC4|SYH_LEPBJ Histidine--tRNA ligase OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain JB197) GN=hisS PE=3 SV=1
Length = 439
Score = 164 bits (416), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 126/202 (62%), Gaps = 2/202 (0%)
Query: 75 PPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD-QLY 133
P KGTRDF PE+MRLRNW+F +E FG+EE D P+LES L+ K+GEEI + QLY
Sbjct: 12 PYKGTRDFYPEEMRLRNWMFSIMRETVLSFGYEEYDGPILESFDLYKAKSGEEIVERQLY 71
Query: 134 CFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQW 193
F D+G RRVA+RPE+TP+LAR+V +++ P++WF++ WRYE+ +GR REH+Q
Sbjct: 72 DFIDKGERRVAIRPEMTPTLARMVAGNLRNLPRPVRWFSIPNLWRYEQPGKGRLREHWQL 131
Query: 194 NMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCH-SIPEHLFG 252
N+D+ GV AE E++ + K+ G ++S RK+L L+ + +H
Sbjct: 132 NVDLFGVDTHRAELEILLMADSILKKFGAPTGSYQIKVSHRKLLDSFLKNSLKLSDHQVH 191
Query: 253 KVCIIIDKIEKLPLDVIKNDLK 274
V ++DK K+ + + ++K
Sbjct: 192 GVSKLLDKKSKISPETFEAEIK 213
>sp|P62371|SYH_LEPIC Histidine--tRNA ligase OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar copenhageni (strain Fiocruz
L1-130) GN=hisS PE=3 SV=1
Length = 439
Score = 162 bits (410), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 125/202 (61%), Gaps = 2/202 (0%)
Query: 75 PPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD-QLY 133
P KGTRDF PEDMRLRNW+F +E FG+EE D P+LES L+ K+GEEI + QLY
Sbjct: 12 PYKGTRDFYPEDMRLRNWMFSVMRETVLSFGYEEYDGPILESFDLYKAKSGEEIVERQLY 71
Query: 134 CFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQW 193
F D+G RRVA+RPE+TP+LAR+V +++ P++WF++ WRYE+ +GR REH+Q
Sbjct: 72 DFIDKGERRVAIRPEMTPTLARMVAGNLRNLPKPVRWFSIPNLWRYEQPGKGRLREHWQL 131
Query: 194 NMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCH-SIPEHLFG 252
N+D+ GV + AE E++ + K+ G ++S RK+L L+ +
Sbjct: 132 NVDLFGVDSHRAELEILLIADSILKKFGAPIGSYQIKVSHRKLLDSFLKNSLKLNGDQVH 191
Query: 253 KVCIIIDKIEKLPLDVIKNDLK 274
V ++DK K+ + + ++K
Sbjct: 192 GVSKLLDKKSKISSEAFETEMK 213
>sp|Q5UXW4|SYH_HALMA Histidine--tRNA ligase OS=Haloarcula marismortui (strain ATCC 43049
/ DSM 3752 / JCM 8966 / VKM B-1809) GN=hisS PE=3 SV=1
Length = 435
Score = 162 bits (410), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 136/233 (58%), Gaps = 14/233 (6%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF P++M+ R W ++V++ +GF E+ P LE +++ K+GEEI ++LY FE
Sbjct: 6 KGFRDFYPKEMQARRWAMDTLEDVAQRYGFREIGTPALEPTEMYVDKSGEEIVEELYSFE 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R+VAL PELTP++AR+ + K + +S P+KW + WRYE +GR RE YQ N+D
Sbjct: 66 DKGGRKVALTPELTPTVARMFVAKQQELSKPIKWVSTRPFWRYEEPQQGRFREFYQTNVD 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCH----SIPEHLFG 252
I G TA+AE+++ + +G+T D R+S R +L VL +PE +
Sbjct: 126 IFGSAEPTADAEILAVAVDMLTDLGLTGEDFEIRVSHRDILSGVLESFEADVDVPEAIRA 185
Query: 253 KVCIIIDKIEKLPLDVIKNDLKSAGMSEA---AIEELLRVLS--IKSLTELEG 300
+DK K+ D + L AG+S +E+L++ + I++L +L G
Sbjct: 186 -----VDKRAKVDHDEYLDALAEAGLSYGQADTFDEMLQIDAEEIETLGDLTG 233
>sp|Q8F9Y3|SYH_LEPIN Histidine--tRNA ligase OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar Lai (strain 56601) GN=hisS
PE=3 SV=1
Length = 439
Score = 161 bits (408), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 125/202 (61%), Gaps = 2/202 (0%)
Query: 75 PPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD-QLY 133
P KGTRDF PEDMRLRNW+F +E FG+EE D P+LES L+ K+GEEI + QLY
Sbjct: 12 PYKGTRDFYPEDMRLRNWMFSVMRETVLSFGYEEYDGPILESFDLYKAKSGEEIVERQLY 71
Query: 134 CFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQW 193
F D+G RRVA+RPE+TP+LAR+V +++ P++WF++ WRYE+ +GR REH+Q
Sbjct: 72 DFIDKGERRVAIRPEMTPTLARMVAGNLRNLPKPVRWFSIPNLWRYEQPGKGRLREHWQL 131
Query: 194 NMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCH-SIPEHLFG 252
N+D+ GV + AE E++ + K+ G ++S RK+L L+ +
Sbjct: 132 NVDLFGVDSHRAELEILLIADSILKKFGAPIGSYQIKVSHRKLLDSFLKNSLKLNGDQVH 191
Query: 253 KVCIIIDKIEKLPLDVIKNDLK 274
V ++DK K+ + + ++K
Sbjct: 192 GVSKLLDKKSKISPEAFETEMK 213
>sp|B0SQQ4|SYH_LEPBP Histidine--tRNA ligase OS=Leptospira biflexa serovar Patoc (strain
Patoc 1 / ATCC 23582 / Paris) GN=hisS PE=3 SV=1
Length = 437
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 142/252 (56%), Gaps = 20/252 (7%)
Query: 69 QKIDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEI 128
QK+ KGTRDF PEDMRLRN+LF ++V R +G+EE D P++ES L+ K GEEI
Sbjct: 4 QKLTTENYKGTRDFYPEDMRLRNYLFSVMKDVVRSYGYEEYDGPMVESLDLYRAKTGEEI 63
Query: 129 -RDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRR 187
Q+Y F D+G+R VA+RPE+TP++AR+V +K + + P++WF++ WRYE+ GR
Sbjct: 64 VGKQIYNFIDKGDREVAIRPEMTPTVARMVAKKLRELPRPIRWFSIPNLWRYEQPGHGRL 123
Query: 188 REHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVL------ 241
REH+Q N+D+ GV + AE E++S G + IS R +L E L
Sbjct: 124 REHWQLNVDMFGVTSSRAELEILSLACDILFAFGAPKNSFKVTISHRSLLDEFLLDGLKV 183
Query: 242 ---RCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSE------AAIEELLRVLSI 292
+ H + + L K I D+ L I ND S+ +S+ A + L ++ I
Sbjct: 184 SPNQAHEVSKILDKKNKITQDEYVALVTKTIPND--SSAVSKIDLFLNATVNSLNQIPGI 241
Query: 293 K--SLTELEGWF 302
K +L ++G F
Sbjct: 242 KEETLAAIKGLF 253
>sp|B0SH39|SYH_LEPBA Histidine--tRNA ligase OS=Leptospira biflexa serovar Patoc (strain
Patoc 1 / Ames) GN=hisS PE=3 SV=1
Length = 437
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 142/252 (56%), Gaps = 20/252 (7%)
Query: 69 QKIDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEI 128
QK+ KGTRDF PEDMRLRN+LF ++V R +G+EE D P++ES L+ K GEEI
Sbjct: 4 QKLTTENYKGTRDFYPEDMRLRNYLFSVMKDVVRSYGYEEYDGPMVESLDLYRAKTGEEI 63
Query: 129 -RDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRR 187
Q+Y F D+G+R VA+RPE+TP++AR+V +K + + P++WF++ WRYE+ GR
Sbjct: 64 VGKQIYNFIDKGDREVAIRPEMTPTVARMVAKKLRELPRPIRWFSIPNLWRYEQPGHGRL 123
Query: 188 REHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVL------ 241
REH+Q N+D+ GV + AE E++S G + IS R +L E L
Sbjct: 124 REHWQLNVDMFGVTSSRAELEILSLACDILFAFGAPKNSFKVTISHRSLLDEFLLDGLKV 183
Query: 242 ---RCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSE------AAIEELLRVLSI 292
+ H + + L K I D+ L I ND S+ +S+ A + L ++ I
Sbjct: 184 SPNQAHEVSKILDKKNKITQDEYVALVTKTIPND--SSAVSKIDLFLNATVNSLNQIPGI 241
Query: 293 K--SLTELEGWF 302
K +L ++G F
Sbjct: 242 KEETLAAIKGLF 253
>sp|B1ZUW6|SYH_OPITP Histidine--tRNA ligase OS=Opitutus terrae (strain DSM 11246 /
PB90-1) GN=hisS PE=3 SV=1
Length = 437
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 126/223 (56%), Gaps = 1/223 (0%)
Query: 78 GTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFED 137
G R+F P+ + RN +F +++ + FGF E D PVLE L+ K+G+EI QL+ F D
Sbjct: 9 GFREFYPDALARRNHIFRLWRQTAVAFGFAEYDAPVLEPLELYKTKSGDEIEAQLFSFTD 68
Query: 138 RGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMDI 197
+G R VALRPE+TP++ R+V K ++ P+KWF++ + +RYER +GR R +Q+N D+
Sbjct: 69 KGGREVALRPEMTPTVCRMVGAKANALKRPIKWFSIAEYYRYERAQKGRERAFFQFNADL 128
Query: 198 IGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCII 257
P AE ELI+ + K G+T D R+S R + L + E V
Sbjct: 129 FAEPGPEAEIELIALLTQCLKAFGLTEQDFYIRLSDRNLWFFYLEALGLDEPRIRAVLSA 188
Query: 258 IDKIEKLPLDVIKNDLKSAGMSEAAIEE-LLRVLSIKSLTELE 299
+DK EK+ D K + G + A+++ +L L IK+L LE
Sbjct: 189 VDKFEKVGDDAFKPYAEQFGPLDLALKQRVLEFLQIKTLASLE 231
>sp|B9LRS2|SYH_HALLT Histidine--tRNA ligase OS=Halorubrum lacusprofundi (strain ATCC
49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=hisS PE=3 SV=1
Length = 442
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 133/226 (58%), Gaps = 3/226 (1%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF P + R + ++ + +GF E+ P LE +++ K+GEEI ++LY FE
Sbjct: 6 KGFRDFYPGEQSARREVTDAIEDAASRYGFREIATPALERTEMYVDKSGEEIVEELYAFE 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R V++ PELTP++AR+V+ KG+ +S P+KW + WRYE++ +GR RE YQ N+D
Sbjct: 66 DKGGRGVSMTPELTPTVARMVVAKGQELSKPIKWMSTRPFWRYEQVQQGRFREFYQTNID 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRC-HSIPEHLFGKVC 255
+ G A A+AE+++ +G+T D FR+S R +L ++R + P+ + K
Sbjct: 126 VFGSSAPEADAEVLAVAADALTDLGLTNDDFEFRVSHRDILGGLVRALAADPDAVDTKAA 185
Query: 256 I-IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLS-IKSLTELE 299
I +DK K+ L AG+ A +E ++S ++++ +L+
Sbjct: 186 IRAVDKRAKVDDGEYLGLLSDAGLDRATAQEFDDLISDVETVDDLD 231
>sp|Q3IMP5|SYH_NATPD Histidine--tRNA ligase OS=Natronomonas pharaonis (strain DSM 2160 /
ATCC 35678) GN=hisS PE=3 SV=1
Length = 432
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 129/227 (56%), Gaps = 4/227 (1%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG R+F P +M R + + +R +GF EV P LE L++ K+GEEI ++LY FE
Sbjct: 6 KGFREFYPGEMSARREVTDTIETRARRYGFREVGTPALERTQLYVDKSGEEIVEELYAFE 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R V+L PELTP++AR+V+ K ++++ P+KWF+ WRYE++ +GR RE YQ N+D
Sbjct: 66 DKGGREVSLTPELTPTVARMVVAKQQALAKPVKWFSTRPFWRYEQVQQGRFREFYQTNID 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
I G A+AE++++ +G+ +D FR+S R +L +L +
Sbjct: 126 IFGSERPEADAEVLATAADALTDLGLDGADFEFRVSHRDILGGLLAAMDSDVDTTDAIR- 184
Query: 257 IIDKIEKLPLDVIKNDLKSAGMSEA---AIEELLRVLSIKSLTELEG 300
+DK EK+ + ++ L AG++ + LLR + L E G
Sbjct: 185 AVDKREKIDDEEYRSLLVGAGLTHEEADTFDSLLRTDDLSELVEFAG 231
>sp|Q9HLX5|SYH_THEAC Histidine--tRNA ligase OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=hisS PE=1 SV=1
Length = 426
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 127/219 (57%), Gaps = 10/219 (4%)
Query: 68 LQKIDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEE 127
+ ++ + +G RDF PEDM + ++F +E + FGF +DFP LE L+ K+GEE
Sbjct: 1 MYRLQIEKIRGFRDFYPEDMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGEE 60
Query: 128 IRDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRR 187
+ Q Y F D+G R V L PE TPS R+V + K + PL+W++ + WRYE GR
Sbjct: 61 LLQQTYSFVDKGGREVTLIPEATPSTVRMVTSR-KDLQRPLRWYSFPKVWRYEEPQAGRY 119
Query: 188 REHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDV-GFRISSRKVLQEVL--RCH 244
REHYQ+N DI G + A+AE+I+ + R+G+ D+ RI+SRK+++E++
Sbjct: 120 REHYQFNADIFGSDSPEADAEVIALASSILDRLGL--QDIYEIRINSRKIMEEIIGGMTS 177
Query: 245 SIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAI 283
S P +F IID+ K+ + + L+SAG+ E +
Sbjct: 178 SDPFSVFS----IIDRYHKISREEFVDQLRSAGIGEDGV 212
>sp|Q97CE6|SYH_THEVO Histidine--tRNA ligase OS=Thermoplasma volcanium (strain ATCC 51530
/ DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=hisS PE=3
SV=1
Length = 426
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 123/215 (57%), Gaps = 4/215 (1%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF PEDM + ++F V+ +GF+ +DFP LE L+ K+GEE+ +Q Y F
Sbjct: 7 KGFRDFYPEDMEIEKFIFETASSVAESYGFKRIDFPSLEYIDLYRIKSGEELLNQTYSFT 66
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
DRG R V L PE TPS R++ + K ++ P++W++ + WRYE GR REHYQ+N D
Sbjct: 67 DRGGREVTLIPEATPSTVRMLTSR-KDIAKPVRWYSFPKVWRYEEPQAGRFREHYQFNAD 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
I G A+AE+IS +G++ + R++SR +++++L I + V
Sbjct: 126 IFGPSNEEADAEIISLASGILDGLGLSGA-YEIRVNSRIMMEDILNGMGIADPY--TVFS 182
Query: 257 IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLS 291
I+D+ K+ + +DL S G+SE + R+ S
Sbjct: 183 IVDRFHKVSKETFVDDLMSVGLSEENSNTIYRMCS 217
>sp|O58028|SYH_PYRHO Histidine--tRNA ligase OS=Pyrococcus horikoshii (strain ATCC 700860
/ DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=hisS
PE=3 SV=1
Length = 431
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 126/218 (57%), Gaps = 4/218 (1%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KGTRDF PEDM R W+F +EV +GF+E+ PV+E LF ++GEE+ QLY F+
Sbjct: 6 KGTRDFLPEDMAKRRWVFEKIREVFEAYGFKEILTPVMEYTKLFQLRSGEEVVKQLYAFK 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R V+LRP++T S+ARL + + P+KW+ + +RYE GR RE +Q ++
Sbjct: 66 DKGGRDVSLRPDMTSSVARLYVNSFQMAPKPIKWYYIANMFRYEEPQSGRYREFWQAGVE 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG V A+AE+I+ + + G+ D I R +L E + + + +
Sbjct: 126 LIGSDKVEADAEVIALFVESYLSTGL--RDFTVNIGDRILLDEFAGMLGVSDDI--GLMR 181
Query: 257 IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKS 294
IIDK +KL + N LK G+ E+ IE++L ++ IK
Sbjct: 182 IIDKRDKLSQEEFINLLKEFGLGESEIEKVLELVEIKG 219
>sp|Q9UY31|SYH_PYRAB Histidine--tRNA ligase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=hisS PE=3 SV=1
Length = 431
Score = 147 bits (371), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 125/218 (57%), Gaps = 4/218 (1%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KGTRDF PE+M R W+F +EV +GF+EV PV+E LF ++GEE+ QLY F+
Sbjct: 6 KGTRDFLPEEMVKRRWVFEKIREVFETYGFKEVLTPVMEYTKLFQLRSGEEVVKQLYAFK 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R VALRP++T S+ARL + ++ P+KW+ + +RYE GR RE +Q ++
Sbjct: 66 DKGGRDVALRPDMTSSVARLYVNSFQTAPKPIKWYYIANMFRYEEPQSGRYREFWQAGVE 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG + A+AE+I+ + + G+ D I R +L E + + + + +
Sbjct: 126 LIGSDKIEADAEVIALFVDSYLSTGL--KDFTVNIGDRVLLDEFAKMLGVKDDI--GLMR 181
Query: 257 IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKS 294
IIDK +KL + L G+ E IE++L ++ IK
Sbjct: 182 IIDKKDKLSQEEFLKALGEFGLDENGIEKVLNLIEIKG 219
>sp|Q18DQ2|SYH_HALWD Histidine--tRNA ligase OS=Haloquadratum walsbyi (strain DSM 16790)
GN=hisS PE=3 SV=1
Length = 434
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 122/224 (54%), Gaps = 2/224 (0%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF P +M R + + + +GF EV P LE +++ K+GE I ++LY F
Sbjct: 6 KGFRDFYPPEMTARRQVIDILETTATQYGFREVGTPTLEQTQMYVDKSGEGIEEELYAFS 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D G R V L PELTP++AR+V+ K +++S P+KW + WRYE++ +GR RE YQ N+D
Sbjct: 66 DDGGRDVTLIPELTPTVARMVVDKQQALSKPIKWVSTRPFWRYEQVQQGRFREFYQTNVD 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
I G A+AE+++ + +G+TASD FR+S R +L +L + +
Sbjct: 126 IFGTADPIADAEILAFAADALRNLGLTASDFEFRVSHRDILSGLLASITNDDADIDTRAA 185
Query: 257 I--IDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTEL 298
I +DK K+ L AG+S + +L+ L E+
Sbjct: 186 IRAVDKRAKIEQAEYHGLLTDAGLSYDQAQSFDDLLTTADLDEI 229
>sp|Q8U431|SYH_PYRFU Histidine--tRNA ligase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=hisS PE=3 SV=1
Length = 432
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 127/218 (58%), Gaps = 4/218 (1%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KGTRDF PE+M R W+F +E +GF+EV P +E LF ++GEE+ QLY F+
Sbjct: 6 KGTRDFLPEEMVKRRWVFERIRERFETYGFKEVLTPTMEYTKLFELRSGEEVVKQLYAFK 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R V+LRP++T S+ARL + ++ P+KW+ + +RYE GR RE +Q ++
Sbjct: 66 DKGGRDVSLRPDMTSSVARLYVNMFQTAPKPIKWYYIANMFRYEEPQSGRYREFWQAGVE 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG V A+AE+I+ + + G+ V I R +L E + + + + +
Sbjct: 126 LIGSDKVEADAEVIALFVESYLATGLREFTVN--IGDRILLDEFAKMLGVKDDI--GLMR 181
Query: 257 IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKS 294
IIDK +KLP + N LK G+ + IE++L +++IK
Sbjct: 182 IIDKKDKLPQEDFINALKEFGLDKNGIEKVLELINIKG 219
>sp|Q5JIM2|SYH_PYRKO Histidine--tRNA ligase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=hisS PE=3 SV=1
Length = 436
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 127/223 (56%), Gaps = 4/223 (1%)
Query: 73 VNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQL 132
++ KGTRD PE+M R W+F +EV F F+EV P E LF ++GEE+ QL
Sbjct: 4 LDKVKGTRDLLPEEMAKRRWVFERIREVFEGFNFQEVLTPTFEYTELFKLRSGEEVVKQL 63
Query: 133 YCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQ 192
Y F+D+G R ++LRP++T S+ARL + + ++ P+KW+ + +RYE GR RE +Q
Sbjct: 64 YAFQDKGGRDISLRPDMTSSVARLYVNRFQNAPKPIKWYYIANMFRYEEPQSGRYREFWQ 123
Query: 193 WNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFG 252
+++IG V A+AE+I+ + +G+ D I R +L E + + + +
Sbjct: 124 AGVELIGSDRVEADAEVIALFTQSYLAVGL--EDFTVNIGDRILLDEFAKMLGVEDDI-- 179
Query: 253 KVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSL 295
+ +IDK +K+ + L+ G+++ +E++L ++ IK L
Sbjct: 180 GLMRLIDKKDKMSREEFVGALREFGLNDDGVEKVLSLIEIKGL 222
>sp|Q9HNP5|SYH_HALSA Histidine--tRNA ligase OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=hisS PE=3 SV=1
Length = 432
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 101/165 (61%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF P +M R ++ + +GF EV P +E +++ K+G EI D+LY F
Sbjct: 6 KGFRDFYPAEMGPRRAAIDAIEDAAASYGFREVGTPAMERTEMYVDKSGAEIVDELYSFT 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R VAL PELTP++AR+V+ K +++S P+KW++ WRYE +GR RE YQ N+D
Sbjct: 66 DQGGRDVALTPELTPTVARMVVAKQQALSKPIKWYSSRPFWRYEEPQQGRFREFYQTNLD 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVL 241
I G A+AE+++ +G+T +D FR+S R +L +L
Sbjct: 126 IFGTSDPRADAEVLAVAADGLTSLGLTGADFEFRVSHRDILGGLL 170
>sp|B0R6V2|SYH_HALS3 Histidine--tRNA ligase OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=hisS PE=3 SV=1
Length = 432
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 101/165 (61%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF P +M R ++ + +GF EV P +E +++ K+G EI D+LY F
Sbjct: 6 KGFRDFYPAEMGPRRAAIDAIEDAAASYGFREVGTPAMERTEMYVDKSGAEIVDELYSFT 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R VAL PELTP++AR+V+ K +++S P+KW++ WRYE +GR RE YQ N+D
Sbjct: 66 DQGGRDVALTPELTPTVARMVVAKQQALSKPIKWYSSRPFWRYEEPQQGRFREFYQTNLD 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVL 241
I G A+AE+++ +G+T +D FR+S R +L +L
Sbjct: 126 IFGTSDPRADAEVLAVAADGLTSLGLTGADFEFRVSHRDILGGLL 170
>sp|B8GDZ3|SYH_METPE Histidine--tRNA ligase OS=Methanosphaerula palustris (strain ATCC
BAA-1556 / DSM 19958 / E1-9c) GN=hisS PE=3 SV=1
Length = 409
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 131/225 (58%), Gaps = 9/225 (4%)
Query: 73 VNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQL 132
V P+GTRDF P++M R + +E R +G+ EV P+ E +LF ++G+ I D++
Sbjct: 2 VQRPRGTRDFLPDEMEARRMIEGRMREAVRRWGYREVATPIFEDLSLFTMRSGQGIIDEM 61
Query: 133 YCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQ 192
Y F+D+G R +ALRPELT ++ R+ + + + ++ PL+W C+RYER +GR R+ +Q
Sbjct: 62 YVFQDKGGRDLALRPELTAAVLRMYVNEARVLAKPLRWCYFADCFRYERPQKGRYRQFWQ 121
Query: 193 WNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFG 252
+ +++IG A+AE+I + G+ D +I +++ +L + E +
Sbjct: 122 FGVELIGADTAAADAEVILVADNAIRSSGL---DYDLKIGHLGLMKHLL--ADVGEEVRR 176
Query: 253 KVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTE 297
KV +DK E D +K+ L++AG++ A + L R+L+ ++L E
Sbjct: 177 KVMAYLDKKE---FDGLKDYLETAGLA-ALTDPLTRLLAAETLDE 217
>sp|A6LIF7|SYH_PARD8 Histidine--tRNA ligase OS=Parabacteroides distasonis (strain ATCC
8503 / DSM 20701 / NCTC 11152) GN=hisS PE=3 SV=1
Length = 451
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 26/241 (10%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLY-- 133
PKGTRDF PE+M RN++F+ +EV L+GF++++ P +E+ + + K GEE L+
Sbjct: 7 PKGTRDFSPEEMAKRNYIFNTIREVFHLYGFQQIETPAMENLSTLMGKYGEEGDKLLFKI 66
Query: 134 -----CFEDRGNRRV---------------ALRPELTPSLARLVIQKGKSVSLPLKWFAV 173
CF + + LR +LT AR V+Q +S P K + +
Sbjct: 67 LNSGDCFAGISDEELMEKNPLRFAAKACEKGLRYDLTVPFARYVVQHRNEISFPFKRYQI 126
Query: 174 GQCWRYERMTRGRRREHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISS 233
WR +R +GR RE YQ + D++G ++ E ELI + F R GI V ++++
Sbjct: 127 QPVWRADRPQKGRYREFYQCDGDVVGSDSLINEVELIQIMDEVFHRFGIR---VCIKMNN 183
Query: 234 RKVLQEVLRCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIK 293
RK+L + + + + + IDK++K+ LD + +L+S G+ E AIE L ++ ++
Sbjct: 184 RKILSGIAEIIGEADKIV-DITVAIDKLDKIGLDNVNEELRSKGLPEEAIERLQPIIMLQ 242
Query: 294 S 294
Sbjct: 243 G 243
>sp|Q8TV61|SYH_METKA Histidine--tRNA ligase OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=hisS PE=3 SV=1
Length = 421
Score = 128 bits (322), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 125/229 (54%), Gaps = 9/229 (3%)
Query: 71 IDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD 130
+ V PKGTRDF PE+MR R WL +V R +G+EEV P E LF K+GEEI +
Sbjct: 6 MKVERPKGTRDFTPEEMRARRWLERYLLDVFRSYGYEEVLTPTFEHAKLFEEKSGEEILE 65
Query: 131 QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREH 190
++Y F+D+ R++ALRPE+T + R + K+ PLK + C+RYE+ RGR RE
Sbjct: 66 EMYVFKDKKGRKLALRPEMTAPVVRFYNAELKTRPHPLKLAYIVNCFRYEQPQRGRWREF 125
Query: 191 YQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHL 250
+Q +++ G A+ E+I F I + + R+ +L+ +L + I E +
Sbjct: 126 WQAGVEVFGSDRPEADVEVIELTYRIFDGI-LPSGAFEVRVGHLGILRGLLEEYGIGEDV 184
Query: 251 FGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTELE 299
KV ++DK E LD +K L + +A L V++ +S +E+E
Sbjct: 185 QNKVAHLVDKGE---LDEVKTLLPAEPAEKA-----LAVVTARSESEVE 225
>sp|O26346|SYH_METTH Histidine--tRNA ligase OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=hisS PE=3 SV=2
Length = 425
Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 121/217 (55%), Gaps = 2/217 (0%)
Query: 71 IDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD 130
+D++ P+GTRDF +MR R + + +G+ E+ P+ E LF K+GEE+ +
Sbjct: 1 MDISRPRGTRDFLFAEMRNRKEVEGVLRRTFETYGYHEIKTPIFEELKLFTVKSGEEVVN 60
Query: 131 QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREH 190
Q+Y F D+G R +ALRPELT +ARL + + + P+K + G C+RYER GR R+
Sbjct: 61 QIYHFTDKGGRELALRPELTAPVARLYMNEMQKKPKPIKMYYFGSCFRYERPQAGRFRQF 120
Query: 191 YQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHL 250
+Q+ ++IG + AEAE+IS +G+ +V I +L+ +L IP L
Sbjct: 121 WQFGCELIGGRSPLAEAEVISLASESLHELGLDGFEV--HIGHLGILRGILGREEIPSEL 178
Query: 251 FGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELL 287
++ +IDK + L+ + +++ +G S + +L+
Sbjct: 179 QDRIMGVIDKGDVEELEALLGEVEVSGESRELLMKLI 215
>sp|Q6L1Q5|SYH_PICTO Histidine--tRNA ligase OS=Picrophilus torridus (strain ATCC 700027
/ DSM 9790 / JCM 10055 / NBRC 100828) GN=hisS PE=3 SV=1
Length = 423
Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 120/217 (55%), Gaps = 11/217 (5%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RD P+DM +R + + FG++ +DFP LES L+ K+G E+ +Q + F
Sbjct: 7 KGFRDHYPDDMEIRYDFIKKMMDTAISFGYKMIDFPSLESMDLYRLKSGTELVEQTFSFT 66
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R V + PE TPS R++ + K + +P +WF++ + WRYE GR REH Q+N D
Sbjct: 67 DKGGREVTMIPEATPSTMRMLTSR-KDIKMPARWFSIPKVWRYEEPQEGRYREHIQFNAD 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLR--CHSIPEHLFGKV 254
+ G + A+AE+I T +G++ ++ R +++ +LR + P LF
Sbjct: 126 MFGADSPEADAEIIGLAATILDNLGLSGQ-YEINVNDRYLMELILRDLGSNNPVDLFP-- 182
Query: 255 CIIIDKIEKLPL-DVIKNDLKSAGMSEAAIEELLRVL 290
+ID+ +K+ L D K LK + + A E+L+ +L
Sbjct: 183 --VIDRFKKMDLTDFKKRLLKD--LDDDASEKLISLL 215
>sp|Q58406|SYH_METJA Histidine--tRNA ligase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=hisS PE=3 SV=1
Length = 416
Score = 124 bits (312), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 106/185 (57%), Gaps = 3/185 (1%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
P+GTRDF PE+M+ R ++ + +EV +G++E+ P ES L +K GEEIR QLY F
Sbjct: 8 PRGTRDFLPEEMKKRRFVENKLREVFERYGYKEILTPTFESFELIAKKTGEEIRKQLYVF 67
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
+D G R +ALRPE+T + R + + K++ PL+ + C+RYER GR RE +Q
Sbjct: 68 KDHGGREMALRPEMTSPVVRFYLNELKNLQKPLRLYYFANCFRYERPQAGRFREFWQMGC 127
Query: 196 DIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVC 255
++IG A+AE+++ + IG+ D I VL+ VL ++ E K+
Sbjct: 128 ELIGCKEPLADAEVLNLAMDGLINIGL---DFDVHIGHLGVLKGVLEKFNVSEEEEVKIR 184
Query: 256 IIIDK 260
+IDK
Sbjct: 185 RLIDK 189
>sp|Q2FTC5|SYH_METHJ Histidine--tRNA ligase OS=Methanospirillum hungatei (strain JF-1 /
DSM 864) GN=hisS PE=3 SV=1
Length = 408
Score = 124 bits (311), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 94/151 (62%)
Query: 73 VNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQL 132
+ P+GTRD P++M R + + +RL+GF E+ PV E LF ++GE I +++
Sbjct: 2 IQKPRGTRDMLPDEMERRREIEARMRARARLYGFREIATPVFEELELFTIRSGEGIINEM 61
Query: 133 YCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQ 192
Y FED+G R +ALRPELT + R+ +++G+S++ P+KW C+RYER +GR R+ +Q
Sbjct: 62 YVFEDKGGRSLALRPELTAPVLRMYVEEGRSLNKPVKWCYFADCFRYERPQKGRYRQFWQ 121
Query: 193 WNMDIIGVPAVTAEAELISSIITFFKRIGIT 223
+ ++IG + +AE+I+ + G+T
Sbjct: 122 FGAELIGADSAMGDAEVITLGYDLLRTAGVT 152
>sp|A2SQI5|SYH_METLZ Histidine--tRNA ligase OS=Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z) GN=hisS PE=3 SV=1
Length = 410
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 91/150 (60%)
Query: 73 VNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQL 132
+ P+GTRDF P +M R ++ + V+ FG+ E+ P+ E LF K+GE I +++
Sbjct: 2 IQKPRGTRDFLPAEMAQRRFVEQKMRAVAATFGYGEIVTPMFEELELFTIKSGEGIINEM 61
Query: 133 YCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQ 192
Y FED+G R++ LRPE+T ++ R + + + PL+WF +C+RYER +GR R+ +Q
Sbjct: 62 YAFEDKGGRKITLRPEITAAVLRAYVNEAQMAPKPLRWFYFAECFRYERPQKGRYRQFWQ 121
Query: 193 WNMDIIGVPAVTAEAELISSIITFFKRIGI 222
+ ++IG + A+AE+IS + G+
Sbjct: 122 FGSELIGADSAAADAEVISLAYELLRCTGV 151
>sp|A6VHK3|SYH_METM7 Histidine--tRNA ligase OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=hisS PE=3 SV=1
Length = 418
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 119/223 (53%), Gaps = 4/223 (1%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF PE+M+ R + ++V + F E++ P ES L +K G+EIR QL+ F
Sbjct: 7 PKGTRDFLPEEMKKRKVIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDEIRTQLFVF 66
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
+D G+R + LRPELT S+AR I + K+ P+K + C+RYE GR RE +Q
Sbjct: 67 KDHGDREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREFWQMGS 126
Query: 196 DIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVC 255
++IG A+AE+I+ I K I + D I VL+ V + + + ++
Sbjct: 127 ELIGSNKPIADAEVINMAIEGLKEINM---DFEINIGHLGVLKGVFEKYDLSDDEGNEIR 183
Query: 256 IIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTEL 298
+IDK + L N ++S E + E++ VL +K E+
Sbjct: 184 RLIDKEDMDGLKSALNRIESEKNIEIS-EKVFEVLDLKGGREV 225
>sp|A4G0V7|SYH_METM5 Histidine--tRNA ligase OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=hisS PE=3 SV=1
Length = 418
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 120/223 (53%), Gaps = 4/223 (1%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF PE+M+ R + ++V + F E++ P ES L +K G+EIR QL+ F
Sbjct: 7 PKGTRDFLPEEMKKRKVIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDEIRTQLFVF 66
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
+D GNR + LRPELT S+AR I + K+ P+K + C+RYE GR RE +Q
Sbjct: 67 KDHGNREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREFWQMGS 126
Query: 196 DIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVC 255
++IG A+AE+I+ I K I + D I VL+ V + + + ++
Sbjct: 127 ELIGSKKPIADAEVINMAIDGLKEINM---DFEINIGHLGVLKGVFEKYDLSDDEGTEIR 183
Query: 256 IIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTEL 298
+IDK + L + + ++S E + +++ VL +K E+
Sbjct: 184 RLIDKEDMEGLKTVLSRIESEKNIEIS-KKVFEVLELKGGREV 225
>sp|Q64QS2|SYH_BACFR Histidine--tRNA ligase OS=Bacteroides fragilis (strain YCH46)
GN=hisS PE=3 SV=1
Length = 454
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 121/233 (51%), Gaps = 26/233 (11%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF P +M RN++F+ ++V L+GF++++ P +E + + K GEE L+
Sbjct: 8 PKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGEEGDKLLFKI 67
Query: 136 EDRGN------------RRVA----------LRPELTPSLARLVIQKGKSVSLPLKWFAV 173
++ G+ R A LR +LT AR V+ ++ P K + +
Sbjct: 68 QNSGDYFSGITDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEITFPFKRYQI 127
Query: 174 GQCWRYERMTRGRRREHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISS 233
WR +R +GR RE YQ + D++G ++ E EL+ + T F R GI V +I++
Sbjct: 128 QPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTRFGIR---VCIKINN 184
Query: 234 RKVLQEVLRCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEEL 286
RK+L + + + + + IDK++K+ LD + +L G+SE AI +L
Sbjct: 185 RKILTGIAEIIGEADKIV-DITVAIDKLDKIGLDNVNKELAEKGISEEAIAKL 236
>sp|A9A947|SYH_METM6 Histidine--tRNA ligase OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=hisS PE=3 SV=1
Length = 418
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 102/185 (55%), Gaps = 3/185 (1%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF PE+M+ R + ++V + F E++ P ES L +K GEEIR QL+ F
Sbjct: 7 PKGTRDFLPEEMKKRKNIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGEEIRKQLFVF 66
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
+D G+R + LRPELT S+AR I + K+ P+K + C+RYE GR RE +Q
Sbjct: 67 KDHGDREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREFWQMGS 126
Query: 196 DIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVC 255
++IG A+AE+I+ I K I + D I VL+ V + + + ++
Sbjct: 127 ELIGSKKPIADAEVINLAIEGLKEINM---DFEINIGHLGVLKGVFEKYDLSDDEGNEIR 183
Query: 256 IIIDK 260
+IDK
Sbjct: 184 RLIDK 188
>sp|A6UQQ6|SYH_METVS Histidine--tRNA ligase OS=Methanococcus vannielii (strain SB / ATCC
35089 / DSM 1224) GN=hisS PE=3 SV=1
Length = 418
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 95/174 (54%), Gaps = 3/174 (1%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF P +M+ R + + + + F E++ P ES L +K GEEIR+QL+ F
Sbjct: 5 PKGTRDFLPVEMKKRKLIEKKLRNIFDSYNFSEINTPTFESFELLSKKTGEEIRNQLFVF 64
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
D GNR + LRPE T S+AR I + K+ P+K + G C+RYE GR RE +Q
Sbjct: 65 NDHGNREMGLRPEFTSSVARFYINEFKNTPKPVKMYYFGNCFRYENPQAGRYREFWQMGA 124
Query: 196 DIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEH 249
++IG ++AE+++ I K I + D I VL+ V +S+ E
Sbjct: 125 ELIGSNKSISDAEVLNMAIEGLKSINM---DFEINIGHLGVLKGVFEKYSLSEE 175
>sp|Q5LAE0|SYH_BACFN Histidine--tRNA ligase OS=Bacteroides fragilis (strain ATCC 25285 /
NCTC 9343) GN=hisS PE=3 SV=1
Length = 454
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 120/233 (51%), Gaps = 26/233 (11%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF P +M RN++F+ ++V L+GF++++ P +E + + K GEE L+
Sbjct: 8 PKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGEEGDKLLFKI 67
Query: 136 EDRGN------------RRVA----------LRPELTPSLARLVIQKGKSVSLPLKWFAV 173
++ GN R A LR +LT AR V+ ++ P K + +
Sbjct: 68 QNSGNYFSGITDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEITFPFKRYQI 127
Query: 174 GQCWRYERMTRGRRREHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISS 233
WR +R +GR RE YQ + D++G ++ E EL+ + T F R GI V +I++
Sbjct: 128 QPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTRFGIR---VCIKINN 184
Query: 234 RKVLQEVLRCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEEL 286
RK+L + + + + + IDK++K+ LD + +L G+S AI +L
Sbjct: 185 RKILTGIAEIIGEADKIV-DITVAIDKLDKIGLDNVNKELAEKGISGEAIAKL 236
>sp|P60921|SYH_METMP Histidine--tRNA ligase OS=Methanococcus maripaludis (strain S2 /
LL) GN=hisS PE=3 SV=1
Length = 416
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 120/223 (53%), Gaps = 4/223 (1%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF PE+M+ R + ++V + F E++ P ES L +K G+EIR QL+ F
Sbjct: 5 PKGTRDFLPEEMKKRKTIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDEIRTQLFVF 64
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
D G+R + LRPELT S+AR I + K+ P+K + C+RYE GR RE +Q
Sbjct: 65 RDHGDREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREFWQMGS 124
Query: 196 DIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVC 255
++IG A+AE+++ I K I + D I VL+ V +++ + ++
Sbjct: 125 ELIGSKKPIADAEVVNMAIEGLKEINM---DFEIHIGHLGVLKGVFEKYNLSDDEGNEIR 181
Query: 256 IIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTEL 298
+IDK + L + + L+S E + +++ VL +K E+
Sbjct: 182 RLIDKEDMDGLKSVLSRLESEKNIEIS-KKVFEVLDLKGGKEV 223
>sp|Q7MTB3|SYH_PORGI Histidine--tRNA ligase OS=Porphyromonas gingivalis (strain ATCC
BAA-308 / W83) GN=hisS PE=3 SV=1
Length = 454
Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 121/242 (50%), Gaps = 28/242 (11%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQL--- 132
PKG RDF P +M RN++F +EV LFGF +++ P +E + + K GEE D+L
Sbjct: 7 PKGMRDFSPVEMSRRNYIFDTIREVYELFGFNQIETPTMEMLSTLMGKYGEE-GDRLLFK 65
Query: 133 ----------YCFEDRGNRRV----------ALRPELTPSLARLVIQKGKSVSLPLKWFA 172
+C E+ + LR +LT AR V+ ++ P K +
Sbjct: 66 VLNSGDVLADFCAEELAEKNSLRFAAKACEKGLRYDLTVPFARYVVMHRNEINFPFKRYQ 125
Query: 173 VGQCWRYERMTRGRRREHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRIS 232
+ WR +R +GR RE YQ + D+IG ++ E ELI I F+R+GI ++
Sbjct: 126 IQPVWRADRPQKGRYREFYQCDGDVIGSDSLMNEVELIQIISEVFRRLGIRTR---ILLN 182
Query: 233 SRKVLQEVLRCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSI 292
+RK+L + + L + + IDK++K+ LD + ++L++ G E AIE L + +
Sbjct: 183 NRKILSGIAEVVDEADRL-TDITVAIDKLDKIGLDKVNDELRTKGFGEEAIERLRPFIEM 241
Query: 293 KS 294
K
Sbjct: 242 KG 243
>sp|A7I940|SYH_METB6 Histidine--tRNA ligase OS=Methanoregula boonei (strain 6A8) GN=hisS
PE=3 SV=1
Length = 410
Score = 121 bits (303), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 87/151 (57%)
Query: 73 VNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQL 132
+ P+GTRDF P++M R + +E R FG+ EV P E LF ++GE I ++
Sbjct: 2 IQKPRGTRDFLPDEMEARRSIEAKMREAVRRFGYREVCTPEFEELELFTLRSGEGIMQEM 61
Query: 133 YCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQ 192
Y FED+G R++ALRPE+T ++ R+ I + K PL+W C+RYER +GR R+ +Q
Sbjct: 62 YVFEDKGGRKLALRPEITAAVIRMYINEAKVAPKPLRWCYFADCFRYERPQKGRYRQFWQ 121
Query: 193 WNMDIIGVPAVTAEAELISSIITFFKRIGIT 223
+ ++IG A+AE+I G+T
Sbjct: 122 FGAELIGADTALADAEVIMLAAEALNATGVT 152
>sp|Q6HG86|SYH1_BACHK Histidine--tRNA ligase 1 OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=hisS1 PE=3 SV=1
Length = 425
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 119/206 (57%), Gaps = 6/206 (2%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRK--AGEEIRDQLYC 134
KGT+D+ PE+ LRN + ++ +G + ++ P L L K G+EI ++Y
Sbjct: 7 KGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEILKEIYT 66
Query: 135 FEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWN 194
+D+G R +ALR +LT A+ V+ ++ LP K + +G+ +R + +GR RE Q +
Sbjct: 67 LQDQGKRDLALRYDLTIPFAK-VVAMNPNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCD 125
Query: 195 MDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKV 254
+DI+GV +V AEAEL+S F+ + + +V + ++RK+L +L+ IP L V
Sbjct: 126 VDIVGVESVMAEAELMSMAFELFQTLNL---EVTIQYNNRKLLNGILQAIHIPTELTSDV 182
Query: 255 CIIIDKIEKLPLDVIKNDLKSAGMSE 280
+ +DKIEK+ +D ++ D+ G+SE
Sbjct: 183 ILSLDKIEKIGIDGVRKDVLERGISE 208
>sp|C3MY40|SYH_SULIM Histidine--tRNA ligase OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=hisS PE=3 SV=1
Length = 426
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 137/229 (59%), Gaps = 8/229 (3%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
+G +D+ D +L F++++ +G+ E+ PV+E LF K GEE+R+ +Y F+
Sbjct: 8 RGMKDYIGIDAEKIRYLESTFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRETMYVFK 67
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+ +R ++LRPE+TPS+AR IQ +S P++ F G +RY+ GR RE Q ++
Sbjct: 68 DKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYREFRQAGIE 127
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG ++ A+ E++ + F+ ++ + ++D+ +I++ + ++++ ++I ++L +
Sbjct: 128 MIGDSSILADLEVLDLLYNFYDKLNL-SNDITIKINNIGIFRKIMDKYNIEDNLQEHILH 186
Query: 257 IIDKIEKL--PLDVIKNDLKSAGM----SEAAIEELLRVLSIKSLTELE 299
+IDK K+ LD+++ +LK+ + ++ ++ ++ I+SL ELE
Sbjct: 187 LIDK-NKINEALDILEKNLKNKDIIDFFNKILTKKDTKLEDIESLAELE 234
>sp|C3MRE4|SYH_SULIL Histidine--tRNA ligase OS=Sulfolobus islandicus (strain L.S.2.15 /
Lassen #1) GN=hisS PE=3 SV=1
Length = 426
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 137/229 (59%), Gaps = 8/229 (3%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
+G +D+ D +L F++++ +G+ E+ PV+E LF K GEE+R+ +Y F+
Sbjct: 8 RGMKDYIGIDAEKIRYLESTFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRETMYVFK 67
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+ +R ++LRPE+TPS+AR IQ +S P++ F G +RY+ GR RE Q ++
Sbjct: 68 DKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYREFRQAGIE 127
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG ++ A+ E++ + F+ ++ + ++D+ +I++ + ++++ ++I ++L +
Sbjct: 128 MIGDSSILADLEVLDLLYNFYDKLNL-SNDITIKINNIGIFRKIMDKYNIEDNLQEHILH 186
Query: 257 IIDKIEKL--PLDVIKNDLKSAGM----SEAAIEELLRVLSIKSLTELE 299
+IDK K+ LD+++ +LK+ + ++ ++ ++ I+SL ELE
Sbjct: 187 LIDK-NKINEALDILEKNLKNKDIIDFFNKILTKKDTKLEDIESLAELE 234
>sp|C4KIQ9|SYH_SULIK Histidine--tRNA ligase OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=hisS PE=3 SV=1
Length = 426
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 137/229 (59%), Gaps = 8/229 (3%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
+G +D+ D +L F++++ +G+ E+ PV+E LF K GEE+R+ +Y F+
Sbjct: 8 RGMKDYIGIDAEKIRYLESTFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRETMYVFK 67
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+ +R ++LRPE+TPS+AR IQ +S P++ F G +RY+ GR RE Q ++
Sbjct: 68 DKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYREFRQAGIE 127
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG ++ A+ E++ + F+ ++ + ++D+ +I++ + ++++ ++I ++L +
Sbjct: 128 MIGDSSILADLEVLDLLYNFYDKLNL-SNDITIKINNIGIFRKIMDKYNIEDNLQEHILH 186
Query: 257 IIDKIEKL--PLDVIKNDLKSAGM----SEAAIEELLRVLSIKSLTELE 299
+IDK K+ LD+++ +LK+ + ++ ++ ++ I+SL ELE
Sbjct: 187 LIDK-NKINEALDILEKNLKNKDIIDFFNKILTKKDTKLEDIESLAELE 234
>sp|C3N7K1|SYH_SULIY Histidine--tRNA ligase OS=Sulfolobus islandicus (strain Y.G.57.14 /
Yellowstone #1) GN=hisS PE=3 SV=1
Length = 426
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 137/229 (59%), Gaps = 8/229 (3%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
+G +D+ D +L F++++ +G+ E+ PV+E LF K GEE+R+ +Y F+
Sbjct: 8 RGMKDYIGIDAEKIRYLESTFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRETMYVFK 67
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+ +R ++LRPE+TPS+AR IQ +S P++ F G +RY+ GR RE Q ++
Sbjct: 68 DKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYREFRQAGIE 127
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG ++ A+ E++ + F+ ++ + ++D+ +I++ + ++++ ++I ++L +
Sbjct: 128 MIGDSSILADLEVLDLLYNFYDKLNL-SNDITIKINNIGIFRKIMDKYNIEDNLQEHILH 186
Query: 257 IIDKIEKL--PLDVIKNDLKSAGM----SEAAIEELLRVLSIKSLTELE 299
+IDK K+ LD+++ +LK+ + ++ ++ ++ I+SL ELE
Sbjct: 187 LIDK-NKINEALDILEKNLKNKDIIDFFNKILTKKDTKLEDIESLAELE 234
>sp|C3NFX3|SYH_SULIN Histidine--tRNA ligase OS=Sulfolobus islandicus (strain Y.N.15.51 /
Yellowstone #2) GN=hisS PE=3 SV=1
Length = 426
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 137/233 (58%), Gaps = 16/233 (6%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
+G +D+ D +L F++++ +G+ E+ PV+E LF K GEE+R+ +Y F+
Sbjct: 8 RGMKDYIGIDAEKIRYLESTFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRETMYVFK 67
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+ +R ++LRPE+TPS+AR IQ +S P++ F G +RY+ GR RE Q ++
Sbjct: 68 DKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYREFRQAGIE 127
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG ++ A+ E++ + F+ ++ + ++D+ +I++ + ++++ ++I ++L +
Sbjct: 128 MIGDSSILADLEVLDLLYNFYDKLNL-SNDITIKINNIGIFRKIMDKYNIEDNLQEHILH 186
Query: 257 IIDKIEKL--PLDVIKNDLKSAGMSEAAIEELLRVLS--------IKSLTELE 299
+IDK K+ LD+++ +LK+ + I+ ++L+ I+SL ELE
Sbjct: 187 LIDK-NKINEALDILEKNLKNKDI----IDFFYKILTKKDTKLEDIESLAELE 234
>sp|O28631|SYH_ARCFU Histidine--tRNA ligase OS=Archaeoglobus fulgidus (strain ATCC 49558
/ VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=hisS
PE=3 SV=1
Length = 409
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 127/230 (55%), Gaps = 14/230 (6%)
Query: 71 IDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD 130
+ + P+GTRDF P++M R + ++++ FG+ EV P E LF RK+GE I +
Sbjct: 1 MKIERPRGTRDFLPDEMERRREIEKRMRKIAESFGYREVATPTFEYLELFTRKSGEGIIE 60
Query: 131 QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREH 190
++Y F+D+ R +ALRPELT + R+ + + + PL+++ C+RYER +GR RE
Sbjct: 61 EMYVFKDKSGRDLALRPELTAPVMRMFVNECSVMPKPLRFYYFANCFRYERPQKGRYREF 120
Query: 191 YQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHL 250
+Q+ +++IG + A+AE+I K +G+ S I +++ +L+ I E
Sbjct: 121 WQFGVELIGSESYLADAEVIILADKILKDVGVNFS---LEIGHVGIMRHLLK--PIGEDR 175
Query: 251 FGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTELEG 300
KV +IDK ++ L+ + ++E + E LR I SL EL+G
Sbjct: 176 ASKVMRLIDKGDREGLE--------SYLAEIRVNEDLRD-KIFSLLELKG 216
>sp|Q81B71|SYH1_BACCR Histidine--tRNA ligase 1 OS=Bacillus cereus (strain ATCC 14579 /
DSM 31) GN=hisS-1 PE=3 SV=1
Length = 426
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 126/223 (56%), Gaps = 7/223 (3%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRK--AGEEIRDQLYC 134
KGT+D+ PE+ LRN + ++ +G + ++ P L L K G+EI ++Y
Sbjct: 8 KGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEILKEIYT 67
Query: 135 FEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWN 194
+D+G R +ALR +LT A+ V+ ++ LP K + +G+ +R + +GR RE Q +
Sbjct: 68 LQDQGKRELALRYDLTIPFAK-VVAMNPNLRLPFKRYEIGKVFRDGPIKQGRFREFIQCD 126
Query: 195 MDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKV 254
+DI+GV +V AEAEL++ F+ + + ++ + ++RK+L +L +IP L V
Sbjct: 127 VDIVGVESVMAEAELMAMAFELFRTLNL---EITIQYNNRKLLNGILESINIPTELTSDV 183
Query: 255 CIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLR-VLSIKSLT 296
+ +DKIEK+ +D ++ D+ G+SE + + VLS LT
Sbjct: 184 ILSLDKIEKIGIDGVRKDVLERGISEEMADTICNTVLSCLKLT 226
>sp|P62367|SYH1_BACC1 Histidine--tRNA ligase 1 OS=Bacillus cereus (strain ATCC 10987)
GN=hisS1 PE=3 SV=1
Length = 436
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 125/223 (56%), Gaps = 7/223 (3%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRK--AGEEIRDQLYC 134
KGT+D+ PE+ LRN + ++ +G + ++ P L L K G+EI ++Y
Sbjct: 7 KGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEILKEIYT 66
Query: 135 FEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWN 194
+D+G R +ALR +LT A+ V+ ++ LP K + +G+ +R + +GR RE Q +
Sbjct: 67 LQDQGKRNLALRYDLTIPFAK-VVAMNPNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCD 125
Query: 195 MDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKV 254
+DI+GV +V AEAEL+S F+ + + +V + ++RK+L +L +IP V
Sbjct: 126 VDIVGVESVMAEAELMSMAFELFRTLNL---EVTIQYNNRKLLNGILESINIPTERTSDV 182
Query: 255 CIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLR-VLSIKSLT 296
+ +DKIEK+ +D ++ D+ G+SE + + VLS LT
Sbjct: 183 ILSLDKIEKIGIDGVRKDVLERGISEEMADTICNTVLSCLKLT 225
>sp|Q81N41|SYH1_BACAN Histidine--tRNA ligase 1 OS=Bacillus anthracis GN=hisS-1 PE=3 SV=1
Length = 425
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 123/212 (58%), Gaps = 6/212 (2%)
Query: 71 IDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRK--AGEEI 128
+++ KGT+D+ PE+ LR+ + ++ +G + ++ P L L K G+EI
Sbjct: 1 MEIRNVKGTKDYLPEEQVLRSKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 60
Query: 129 RDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRR 188
++Y +D+G R +ALR +LT A+ V+ ++ LP K + +G+ +R + +GR R
Sbjct: 61 LKEIYTLQDQGKRDLALRYDLTIPFAK-VVAMNPNIRLPFKRYEIGKVFRDGPIKQGRFR 119
Query: 189 EHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPE 248
E Q ++DI+GV +V AEAEL+S F+ + + +V + ++RK+L +L+ +IP
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFQTLNL---EVTIQYNNRKLLNGILQAINIPT 176
Query: 249 HLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSE 280
L V + +DKIEK+ +D ++ D+ G+SE
Sbjct: 177 ELTSDVILSLDKIEKIGIDGVRKDVLERGISE 208
>sp|Q980L3|SYH_SULSO Histidine--tRNA ligase OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=hisS PE=3 SV=1
Length = 426
Score = 118 bits (295), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 111/184 (60%), Gaps = 1/184 (0%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
+G +D+ D +L F+++++ +G+ E+ PV+E LF K GEE+R +Y F+
Sbjct: 8 RGMKDYIGIDAEKIRYLESTFRDLAKKYGYSEIITPVVEEFKLFELKGGEELRQTMYVFK 67
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+ +R ++LRPE+TPS+AR IQ +S P++ F G +RY+ GR RE Q ++
Sbjct: 68 DKADREISLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYREFRQAGIE 127
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG ++ A+ E++ + F+ ++ ++ D+ +I++ + ++++ ++I ++L V
Sbjct: 128 MIGDSSILADVEVLDLLYNFYDKLNLS-KDITIKINNIGIFRKIMDKYNIEDNLQEHVLH 186
Query: 257 IIDK 260
+IDK
Sbjct: 187 LIDK 190
>sp|Q7VF68|SYH_HELHP Histidine--tRNA ligase OS=Helicobacter hepaticus (strain ATCC 51449
/ 3B1) GN=hisS PE=3 SV=1
Length = 442
Score = 118 bits (295), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 117/227 (51%), Gaps = 4/227 (1%)
Query: 78 GTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFED 137
G +D P++ + L + V FGF ++ P LE + I++ +EI+ +LY F+D
Sbjct: 11 GFKDRLPKEALAKAHLLNKVSNVFMNFGFVPIETPHLEYADVLIKQGSDEIQKELYRFKD 70
Query: 138 RGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMDI 197
G R VALR +LT LAR V Q V LP K +A+G +R ER RGR RE Q + D
Sbjct: 71 HGGRDVALRFDLTVPLARFVSQYKNEVGLPFKRYAIGNVFRGERAQRGRYREFTQCDFDF 130
Query: 198 IGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLR-CHSIPEHLFGKVCI 256
IG +++ +AE++ I ++GI + ++ R +L + C E
Sbjct: 131 IGSDSISCDAEILQVIYASLMKLGI--EEFTIWLNHRSILNGICEYCGITQEKDINVALR 188
Query: 257 IIDKIEKLPLDVIKNDL-KSAGMSEAAIEELLRVLSIKSLTELEGWF 302
IIDK++K+ + + +L K G++ +E LL SIK E E +F
Sbjct: 189 IIDKLDKIGKERVSEELQKELGLNNNQVENLLEYTSIKQQGESESFF 235
>sp|A6KXA6|SYH_BACV8 Histidine--tRNA ligase OS=Bacteroides vulgatus (strain ATCC 8482 /
DSM 1447 / NCTC 11154) GN=hisS PE=3 SV=1
Length = 454
Score = 117 bits (294), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 120/233 (51%), Gaps = 26/233 (11%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF P +M RN++F+ ++V LFG+++++ P +E+ + + K G+E L+
Sbjct: 8 PKGTRDFSPVEMAKRNYIFNTIRDVFHLFGYQQIETPSMENLSTLMGKYGDEGDKLLFKI 67
Query: 136 EDRGNR----------------------RVALRPELTPSLARLVIQKGKSVSLPLKWFAV 173
++ G+ LR +LT AR V+ +S P K + +
Sbjct: 68 QNSGDYFNGITDEELLSRNAVKLASKFCEKGLRYDLTVPFARYVVMHRDEISFPFKRYQI 127
Query: 174 GQCWRYERMTRGRRREHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISS 233
WR +R +GR RE YQ + D++G ++ E EL+ I F + G+ S +I++
Sbjct: 128 QPVWRADRPQKGRYREFYQCDADVVGSNSLLNEVELVQMIDRVFGKFGVRVS---IKINN 184
Query: 234 RKVLQEVLRCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEEL 286
RK+L + + + + + IDK++K+ L+ + +L S G+ + AI++L
Sbjct: 185 RKILTGIAEIIGEADKIV-DITVAIDKLDKIGLENVNAELASKGIPQEAIDKL 236
>sp|A6UT01|SYH_META3 Histidine--tRNA ligase OS=Methanococcus aeolicus (strain Nankai-3 /
ATCC BAA-1280) GN=hisS PE=3 SV=1
Length = 418
Score = 117 bits (294), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 100/187 (53%), Gaps = 3/187 (1%)
Query: 74 NPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLY 133
N PKGTRDF P +M+ R + + + V + F E++ P E L +K GE+IR QL+
Sbjct: 3 NRPKGTRDFAPSEMKKRKIIENKLKSVFMAYNFNEINTPTFEYFELLSKKTGEDIRKQLF 62
Query: 134 CFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQW 193
F+D GNR + LRPE+T S+ R I + K++ P K F C+RYE+ GR RE +Q
Sbjct: 63 VFKDHGNREMGLRPEITSSVVRFYINELKNLPKPQKLFYFANCFRYEQPQAGRYREFWQM 122
Query: 194 NMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGK 253
+++G A+AE+I+ + +I + D I VL+ V + E K
Sbjct: 123 GCELLGSKNPIADAEVINLAMDGLNKINM---DYEIHIGHLGVLKGVFEEFGLTEDEELK 179
Query: 254 VCIIIDK 260
+ +IDK
Sbjct: 180 IRRLIDK 186
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,799,952
Number of Sequences: 539616
Number of extensions: 4797449
Number of successful extensions: 13817
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 145
Number of HSP's that attempted gapping in prelim test: 11909
Number of HSP's gapped (non-prelim): 961
length of query: 302
length of database: 191,569,459
effective HSP length: 117
effective length of query: 185
effective length of database: 128,434,387
effective search space: 23760361595
effective search space used: 23760361595
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)