Your job contains 1 sequence.
>022116
MMGQQVKPDPAFENGWPDLGKIVAPAAGYGFGPGFEASYAISRTSSSPPAVVPEAVDVKG
KVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAER
VRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF
NVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEM
GLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQNFYNVASFPSQQFTGTLEASNLKM
EM
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022116
(302 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2139484 - symbol:CIB1 "AT4G34530" species:3702... 450 1.8e-46 2
UNIPROTKB|Q69JJ6 - symbol:OSJNBa0026C08.22 "TA1 protein-l... 456 3.5e-43 1
UNIPROTKB|Q6Z2G7 - symbol:P0680A05.9 "Putative bHLH trans... 454 5.7e-43 1
UNIPROTKB|Q5N802 - symbol:P0004D12.24 "BHLH transcription... 451 1.2e-42 1
UNIPROTKB|Q84QW1 - symbol:OJ1191_A10.109 "BHLH transcript... 450 1.5e-42 1
TAIR|locus:2205420 - symbol:AT1G68920 species:3702 "Arabi... 439 2.2e-41 1
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 412 5.2e-41 2
UNIPROTKB|Q5VR96 - symbol:P0038C05.31-1 "Os06g0275600 pro... 431 1.6e-40 1
TAIR|locus:2028804 - symbol:CIB5 "AT1G26260" species:3702... 424 8.7e-40 1
TAIR|locus:2079676 - symbol:AT3G07340 "AT3G07340" species... 423 1.1e-39 1
TAIR|locus:2152551 - symbol:AT5G48560 "AT5G48560" species... 418 3.7e-39 1
TAIR|locus:2115200 - symbol:BEE2 "AT4G36540" species:3702... 408 4.3e-38 1
UNIPROTKB|Q6ZCV8 - symbol:P0028A08.20 "Os08g0487700 prote... 403 1.5e-37 1
TAIR|locus:2095198 - symbol:AT3G23690 "AT3G23690" species... 395 1.0e-36 1
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 386 9.2e-36 1
TAIR|locus:2053766 - symbol:AT2G42300 "AT2G42300" species... 379 5.1e-35 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 365 1.5e-33 1
TAIR|locus:2076581 - symbol:AT3G57800 "AT3G57800" species... 216 4.2e-33 2
UNIPROTKB|Q8GZV6 - symbol:OJ1017C11.10 "Putative uncharac... 368 6.2e-33 1
TAIR|locus:2202867 - symbol:BPEp "AT1G59640" species:3702... 354 2.3e-32 1
TAIR|locus:505006688 - symbol:AT5G50915 "AT5G50915" speci... 353 2.9e-32 1
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 322 6.9e-32 2
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 343 3.3e-31 1
UNIPROTKB|Q75M33 - symbol:P0668H12.5 "BHLH transcription ... 334 3.0e-30 1
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 320 9.1e-29 1
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 319 1.2e-28 1
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 307 2.2e-27 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 233 1.5e-19 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 226 8.3e-19 1
UNIPROTKB|Q69WX7 - symbol:P0417G12.19 "Basic helix-loop-h... 222 2.2e-18 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 229 2.6e-18 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 222 3.2e-18 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 219 1.4e-17 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 213 2.0e-17 1
UNIPROTKB|Q6EPZ6 - symbol:P0014G10.34 "BHLH transcription... 214 9.7e-17 1
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 206 5.8e-16 1
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 206 7.9e-16 1
UNIPROTKB|Q6Z1F9 - symbol:OSJNBa0033D24.39 "BHLH transcri... 183 3.5e-14 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 195 2.4e-13 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 195 3.1e-13 1
UNIPROTKB|Q8S490 - symbol:rau1 "Transcription factor RAU1... 167 2.7e-12 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 185 3.6e-12 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 180 5.2e-12 1
UNIPROTKB|Q6K8Y4 - symbol:OJ1695_H09.18 "Basic helix-loop... 150 7.6e-12 2
TAIR|locus:2141573 - symbol:FBH2 "AT4G09180" species:3702... 170 3.8e-11 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 173 4.4e-11 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 156 5.0e-11 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 156 5.0e-11 1
TAIR|locus:2059979 - symbol:FBH4 "AT2G42280" species:3702... 174 5.2e-11 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 175 6.5e-11 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 176 7.9e-11 1
TAIR|locus:2008693 - symbol:FBH1 "AT1G35460" species:3702... 167 8.7e-11 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 174 1.2e-10 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 171 1.7e-10 1
TAIR|locus:2026037 - symbol:FBH3 "AT1G51140" species:3702... 169 2.4e-10 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 165 3.4e-10 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 167 5.2e-10 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 163 1.8e-09 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 161 2.4e-09 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 159 3.5e-09 1
UNIPROTKB|Q2QMM0 - symbol:LOC_Os12g40710 "Helix-loop-heli... 154 4.8e-09 1
UNIPROTKB|Q7XT55 - symbol:OSJNBa0084K20.3 "OSJNBa0076N16.... 149 4.9e-09 1
TAIR|locus:2041369 - symbol:PIL1 "phytochrome interacting... 155 1.3e-08 1
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 146 4.0e-08 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 149 5.1e-08 1
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 146 7.1e-08 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 143 7.6e-08 1
UNIPROTKB|Q2QMN2 - symbol:LOC_Os12g40590 "Helix-loop-heli... 143 1.0e-07 1
TAIR|locus:2089418 - symbol:AT3G21330 "AT3G21330" species... 146 1.2e-07 1
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 144 1.7e-07 1
TAIR|locus:505006103 - symbol:AT1G05805 "AT1G05805" speci... 144 1.9e-07 1
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 136 4.5e-07 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 133 8.0e-07 1
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 133 9.5e-07 1
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 132 1.1e-06 1
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 130 2.6e-06 1
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 125 3.1e-06 1
UNIPROTKB|Q6AV35 - symbol:OSJNBa0063J18.7 "Putative trans... 131 4.2e-06 1
UNIPROTKB|Q651K2 - symbol:B1089G05.30 "BHLH protein-like"... 126 1.4e-05 1
UNIPROTKB|Q9ASJ3 - symbol:P0439B06.24 "Putative uncharact... 126 1.4e-05 1
UNIPROTKB|Q69TX2 - symbol:P0021C04.13 "BHLH protein-like"... 122 1.4e-05 1
UNIPROTKB|Q8W5G3 - symbol:OSJNBa0002J24.23 "Helix-loop-he... 124 2.7e-05 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 125 2.8e-05 1
UNIPROTKB|Q8S0N2 - symbol:P0692C11.41-1 "BHLH transcripti... 125 3.3e-05 1
UNIPROTKB|Q2R0R9 - symbol:LOC_Os11g41640 "Helix-loop-heli... 121 3.3e-05 1
TAIR|locus:2205455 - symbol:BIM2 "AT1G69010" species:3702... 112 4.6e-05 2
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 124 8.1e-05 1
TAIR|locus:2028957 - symbol:RHD6 "AT1G66470" species:3702... 119 9.3e-05 1
UNIPROTKB|Q5TKP7 - symbol:OJ1362_G11.11 "Putative unchara... 121 0.00010 1
TAIR|locus:2204898 - symbol:HFR1 "AT1G02340" species:3702... 118 0.00012 1
TAIR|locus:2156015 - symbol:RSL1 "AT5G37800" species:3702... 118 0.00013 1
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 122 0.00015 1
UNIPROTKB|Q6ZFY4 - symbol:OJ1311_H06.19 "BHLH protein-lik... 117 0.00016 1
ZFIN|ZDB-GENE-041210-21 - symbol:tfec "transcription fact... 119 0.00016 1
UNIPROTKB|Q657D1 - symbol:P0697C12.40 "BHLH transcription... 120 0.00017 1
TAIR|locus:2179122 - symbol:APTX "APRATAXIN-like" species... 123 0.00018 1
UNIPROTKB|Q5MP56 - symbol:BA1 "Uncharacterized protein" s... 113 0.00020 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 116 0.00024 1
TAIR|locus:2126856 - symbol:IND "AT4G00120" species:3702 ... 110 0.00032 1
TAIR|locus:2098008 - symbol:PIL2 "phytochrome interacting... 115 0.00039 1
WARNING: Descriptions of 6 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 450 (163.5 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 109/206 (52%), Positives = 135/206 (65%)
Query: 51 VVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKAS----EVQKHDYIHVRA 106
+V E + K K++ N + ++ + K +K + + +S E++K DYIHVRA
Sbjct: 117 LVEEGEEEKSKITEQ--NNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEKTDYIHVRA 174
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
RRGQATDSHS+AERVRREKISERMK+LQDLVPGC+KITGKAGMLDEIINYVQSLQRQ+EF
Sbjct: 175 RRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEF 234
Query: 167 LSMKLAAVNPRLDFNVDNLFAKEA----FPVCPSNFPTI-GMSSEMTHP--------AAY 213
LSMKLA VNPR DF++D++FAKE V PS + G S EM H + Y
Sbjct: 235 LSMKLAIVNPRPDFDMDDIFAKEVASTPMTVVPSPEMVLSGYSHEMVHSGYSSEMVNSGY 294
Query: 214 LHQFNSLQQQAVSCSGLDLGIINPSE 239
LH N +QQ V+ S L N E
Sbjct: 295 LH-VNPMQQ--VNTSSDPLSCFNNGE 317
Score = 54 (24.1 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 249 PVSAPETFIDS-SCYPHLQPSSNWDSDLQNFY 279
P+ T D SC+ + + S WDS +QN Y
Sbjct: 299 PMQQVNTSSDPLSCFNNGEAPSMWDSHVQNLY 330
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 115/227 (50%), Positives = 139/227 (61%)
Query: 44 TSSSPPAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIH 103
+S+ P E+V K K E+ S A K K K + SE QK +YIH
Sbjct: 198 SSNLPSDSANESVHSKDK------GEESSPATTNGGKSKGKGAK----ETSESQKEEYIH 247
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQAT+SHSLAER+RREKISERMK LQDLVPGC+K+TGKA MLDEIINYVQSLQRQ
Sbjct: 248 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 307
Query: 164 VEFLSMKLAAVNPRLDFNVDNLFAKEA--FPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQ 221
VEFLSMKLA VNPRLD N++ L +K+ FP PS+ +IG S EM HP L Q +
Sbjct: 308 VEFLSMKLATVNPRLDLNIEGLLSKDLLRFPGVPSS--SIGFSPEMMHPQLQLSQPGLIH 365
Query: 222 QQAVSCSGLDL-GIINPSEMGLRRTISAPVSAPETFIDSS--CYPHL 265
+ D+ I +++G + P S +F D S YP L
Sbjct: 366 GGTAGMANPDVFRRIIQAQLGAKDGSQMPHSLNGSFSDVSQMAYPSL 412
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 108/221 (48%), Positives = 135/221 (61%)
Query: 91 TKASEV---QKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKA 147
T AS V QK DYIHVRARRGQATDSHSLAERVRRE+ISERM+YLQ+LVPGCNK+TGKA
Sbjct: 148 TSASTVTAGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKA 207
Query: 148 GMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN-VDNLFAKE-AFPVC-PSNFPTIGMS 204
GMLDEIINYVQSLQ+QVEFLSMK+AA NP ++FN V++LF ++ + C P+ P + +
Sbjct: 208 GMLDEIINYVQSLQKQVEFLSMKIAASNPVVNFNIVEDLFGRQLSQAACNPAALPAMALP 267
Query: 205 SEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTIS---APVSAPETFIDSSC 261
P+ Q + LQQ S G+ EM + S P+S P C
Sbjct: 268 MAQVEPSCL--QMSPLQQMQTSAGSSGYGL----EMVVSNQYSPPGGPMSVPAGASVEPC 321
Query: 262 YPHLQPSSNWDSDLQNFYNVASFPSQQFTGTLEASNLKMEM 302
++ ++ WD ++ P Q NLKMEM
Sbjct: 322 L-NVNGAAGWDIGSHGLFSGFDAPFQSVQSDCLLDNLKMEM 361
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 114/233 (48%), Positives = 143/233 (61%)
Query: 83 RKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 142
+K K ++K E K DYIHVRARRG+ATDSHSLAERVRREKIS+RMK LQDLVPGCNK
Sbjct: 257 KKQGKDSSSKPPEPPK-DYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNK 315
Query: 143 ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN-VDNLFAKEAFPVC-P---SN 197
+ GKA MLDEIINYVQSLQRQVEFLSMKLA VNP+LDFN + NL AK+ C P S+
Sbjct: 316 VVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLAKDMHQSCSPLQSSH 375
Query: 198 FPTIGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMG-LRRTISAPVSAPETF 256
FP + S P Y++Q Q + C GL G+ N M L P+ + F
Sbjct: 376 FP-LETSGA---PLPYINQ--PQQGNPLGC-GLTNGMDNQGSMHPLDPAFCRPMGSHHPF 428
Query: 257 IDSSCYPHLQPSSNWDSDLQNFYNVASFPSQQ-------FTGTLEASNLKMEM 302
++ Q + W DLQ+ + SQ+ + G+L+ ++KME+
Sbjct: 429 LNGVSDAASQVGAFWQDDLQSVVQMDMGQSQEIATSSNSYNGSLQTVHMKMEL 481
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 109/227 (48%), Positives = 142/227 (62%)
Query: 83 RKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 142
+K K +N K E K DY+HVRARRGQATDSHSLAERVRRE+IS+RMK LQDLVPGCNK
Sbjct: 184 QKQGKGKNAKPVEPPK-DYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNK 242
Query: 143 ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVCPSNFPTI 201
+ GKA MLDEIINYVQSLQRQVEFLSMKLA VNP LDF N+ L K+ F C + ++
Sbjct: 243 VIGKALMLDEIINYVQSLQRQVEFLSMKLATVNP-LDFSNLPTLLQKDMFQACGPSASSV 301
Query: 202 GMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSC 261
S E ++ A + + QQ S +N ++ L + +A A F D +
Sbjct: 302 -FSLESSNSAFRFAEQGDVFQQFAQNSMESQCTLNQLDLALSQATNA---AQYAFQDGTA 357
Query: 262 YPHLQPSSNWDSDLQNFYNVASFPSQQ-------FTGTLEASNLKME 301
+LQ + W+ DLQ+ +++ + SQ+ F G +A ++KME
Sbjct: 358 GANLQQRNFWEDDLQSVFHIENGQSQENGVSAPNFHGQQQAGHMKME 404
>TAIR|locus:2205420 [details] [associations]
symbol:AT1G68920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AF488584 EMBL:AY128299
EMBL:BT002259 IPI:IPI00536565 IPI:IPI00545990 PIR:G96713
RefSeq:NP_001031255.1 RefSeq:NP_177058.1 RefSeq:NP_849863.2
UniGene:At.28096 ProteinModelPortal:Q9CAA9 SMR:Q9CAA9 STRING:Q9CAA9
EnsemblPlants:AT1G68920.1 EnsemblPlants:AT1G68920.2 GeneID:843225
KEGG:ath:AT1G68920 TAIR:At1g68920 eggNOG:NOG301979
HOGENOM:HOG000238007 InParanoid:Q3E6P7 OMA:MLKGGIF PhylomeDB:Q9CAA9
ProtClustDB:CLSN2682343 Genevestigator:Q9CAA9 Uniprot:Q9CAA9
Length = 486
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 95/165 (57%), Positives = 116/165 (70%)
Query: 81 KKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
KK + K Q ++S+ K YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC
Sbjct: 280 KKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGC 339
Query: 141 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPT 200
NK+TGKA MLDEIINYVQSLQRQVEFLSMKLA VNP++DFN++ L AK+A + + T
Sbjct: 340 NKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAGSSST 399
Query: 201 IGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDL-GIINPSEMGLRR 244
M+ AY + QQ +S G + ++P G +R
Sbjct: 400 TPFPPNMS--MAYPPLPHGFMQQTLSSIGRTITSPLSPMNGGFKR 442
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 412 (150.1 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 89/159 (55%), Positives = 111/159 (69%)
Query: 52 VPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNT------KASEVQKHDYIHVR 105
+PEA K +V E +S KK K D+ + T ++ E K +YIH+R
Sbjct: 149 LPEAESQWNKKAVEEFQEDPQRG-NDQSQKKHKNDQSKETVNKESSQSEEAPKENYIHMR 207
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
ARRGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNKITGKA MLDEIINYVQSLQ+QVE
Sbjct: 208 ARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 267
Query: 166 FLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMS 204
FLSMKLA VNP ++ ++D + AK+ N PT+G++
Sbjct: 268 FLSMKLATVNPEINIDIDRILAKDLLQSRDRNTPTLGLN 306
Score = 40 (19.1 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 267 PSSNWDSDLQNFYNVASFPSQQFTGTLEASN--LKMEM 302
P + +S+LQN Y + F S T + + N LK E+
Sbjct: 330 PQTTLESELQNLYQMG-FVSNPSTMSSFSPNGRLKPEL 366
>UNIPROTKB|Q5VR96 [details] [associations]
symbol:P0038C05.31-1 "Os06g0275600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003044 RefSeq:NP_001057380.1 UniGene:Os.32526
EnsemblPlants:LOC_Os06g16400.1 EnsemblPlants:LOC_Os06g16400.2
GeneID:4340749 KEGG:osa:4340749 ProtClustDB:CLSN2697804
Uniprot:Q5VR96
Length = 437
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 100/203 (49%), Positives = 128/203 (63%)
Query: 77 RESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 136
R S K+ Q + K DYIHVRARRGQAT+SHSLAERVRREKISERMKYLQDL
Sbjct: 233 RSSVASGKSSGKQIKDNAGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDL 292
Query: 137 VPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPS 196
VPGC+K+TGKA MLDEIINYVQSLQRQVEFLSMKLA+VNP LDFN++ + +K+ F C
Sbjct: 293 VPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQ-CRG 351
Query: 197 NFPT--IGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPE 254
+ G ++ HP + ++ + G+ I+NP++ R I AP+
Sbjct: 352 TTASSAFGFFPDIVHPRLHPPKYTQV--------GMP-SIVNPTD-AFGRVIHAPLGTNS 401
Query: 255 TFIDSSCYPHLQPSSNWDSDLQN 277
F + H P+ N + + Q+
Sbjct: 402 AFKEPK---HQMPN-NLNGEFQD 420
>TAIR|locus:2028804 [details] [associations]
symbol:CIB5 "AT1G26260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0048513 "organ development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238007
EMBL:AK117355 EMBL:BT005334 EMBL:AJ630483 EMBL:AY568655
EMBL:AF488608 IPI:IPI00529982 IPI:IPI00547855 PIR:H86388
RefSeq:NP_001031093.1 RefSeq:NP_173950.1 RefSeq:NP_973913.1
UniGene:At.41276 ProteinModelPortal:Q9C670 SMR:Q9C670 IntAct:Q9C670
STRING:Q9C670 EnsemblPlants:AT1G26260.1 EnsemblPlants:AT1G26260.2
GeneID:839167 KEGG:ath:AT1G26260 TAIR:At1g26260 eggNOG:NOG284637
InParanoid:Q9C670 OMA:ETHGYES PhylomeDB:Q9C670
ProtClustDB:CLSN2682645 Genevestigator:Q9C670 Uniprot:Q9C670
Length = 390
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 103/193 (53%), Positives = 128/193 (66%)
Query: 57 DVK-GKVSVAALNEKVSAAVGR----ESFKKRKADKVQNTKA----SEVQKHD-----YI 102
D K G+ S + K +G+ E KK+K ++ + A SE Q D YI
Sbjct: 162 DAKCGQTSSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPTSNANKTNSEKQPSDSLKDGYI 221
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
H+RARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+K+TGKA MLDEIINYVQSLQ
Sbjct: 222 HMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQC 281
Query: 163 QVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHP-AAYLHQFNSLQ 221
Q+EFLSMKL+AVNP LDFN+++L AK+A S+ PT + M +P +YL Q +Q
Sbjct: 282 QIEFLSMKLSAVNPVLDFNLESLLAKDALQ---SSAPTFPHNMSMLYPPVSYLSQTGFMQ 338
Query: 222 QQAVSCSGLDLGI 234
S S L G+
Sbjct: 339 PNISSMSLLSGGL 351
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 100/181 (55%), Positives = 118/181 (65%)
Query: 82 KRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCN 141
K+ + TK+ + K DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCN
Sbjct: 237 KKSEENGDKTKSIDPYK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCN 295
Query: 142 KITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTI 201
K+TGKA MLDEIINYVQSLQRQVEFLSMKL++VN RLDFN+D L +K+ FP +N
Sbjct: 296 KVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFP-SSNNLMHH 354
Query: 202 GMSSEMTHPAAYL---HQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFID 258
++ A L H +LQ S +INP E R+ + + F D
Sbjct: 355 QQVLQLDSSAETLLGDHHNKNLQLNPDISSN---NVINPLETSETRSFISHLPTLAHFTD 411
Query: 259 S 259
S
Sbjct: 412 S 412
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 103/215 (47%), Positives = 133/215 (61%)
Query: 84 KADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI 143
+ +K NTK E K DYIHVRARRGQATDSHSLAERVRREKI ERMK LQDLVPGCNK+
Sbjct: 282 EGNKSNNTKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKV 340
Query: 144 TGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNP-RLDFNVDNLFAKEAFPVCPSNFPTIG 202
TGKA MLDEIINYVQSLQRQVEFLSMKL++VN RLDFNVD L +K+ + PS+ +
Sbjct: 341 TGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDV--MIPSSNNRLH 398
Query: 203 MSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCY 262
+ +++ HQ QQ + + L + N S + + +P+++ ET + +
Sbjct: 399 EEGLQSKSSSHHHQ----QQLNIYNNNSQL-LPNISSNNMM--LQSPMNSLETSTLARSF 451
Query: 263 PHLQPSSNWDSDLQNFYNVASFPSQQFTGTLEASN 297
HL + + + + + Q G A N
Sbjct: 452 THLPTLTQFTDSISQYQMFSEEDLQSIVGMGVAEN 486
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 89/161 (55%), Positives = 114/161 (70%)
Query: 69 EKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISE 128
+K+ A E K K++ +SE+QK DYIHVRARRG+ATD HSLAER RREKIS+
Sbjct: 106 KKIKAEDETEPSMKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISK 165
Query: 129 RMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAK 188
+MK LQD+VPGCNK+TGKAGMLDEIINYVQSLQ+QVEFLSMKL+ +NP L+ ++D+L AK
Sbjct: 166 KMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPELECHIDDLSAK 225
Query: 189 EAFPVCPSNFPTIGMSSE--MTHPAAY-LHQFNSLQQQAVS 226
+ F + P G S + M ++ LHQ SL ++
Sbjct: 226 Q-FQAYFTG-PPEGDSKQSIMADFRSFPLHQQGSLDYSVIN 264
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 102/186 (54%), Positives = 125/186 (67%)
Query: 57 DVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHS 116
DV G+V + +AA G +S K K K A E QK Y HVRAR+GQAT++HS
Sbjct: 139 DVNGEV----IGPPATAAAGGKS--KGKGAK----DAGEAQKEGYSHVRARKGQATNNHS 188
Query: 117 LAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNP 176
LAER+RREKISERMK LQDLVPGC+K+TGKA MLDEIINYVQSLQRQVEFLSMKL+AVNP
Sbjct: 189 LAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQVEFLSMKLSAVNP 248
Query: 177 RLDFNVDNLF--AKEA--FPVCPSNFPT-IGMSSEMTHPAAYLHQFNSLQQQAVSCSGLD 231
R+D ++++L +K+ FP PS+ P S+EM P L + LQ G+
Sbjct: 249 RIDLDIESLVNNSKDVLRFPGQPSSAPMGFSFSTEMM-PGLQLSRPGILQ------GGVH 301
Query: 232 LGIINP 237
G+INP
Sbjct: 302 -GMINP 306
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 87/132 (65%), Positives = 97/132 (73%)
Query: 84 KADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI 143
K D + K E K DYIHVRARRGQATDSHSLAER RREKISERM LQDLVPGCN+I
Sbjct: 172 KGDNKDDAKPPEAPK-DYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRI 230
Query: 144 TGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTI-G 202
TGKA MLDEIINYVQSLQRQVEFLSMKLA VNPR++FN + + E S ++
Sbjct: 231 TGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANASLSTEMIQPGESLTQSLYA 290
Query: 203 MS-SEMTHPAAY 213
M+ SE P+AY
Sbjct: 291 MACSEQRLPSAY 302
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 86/191 (45%), Positives = 123/191 (64%)
Query: 61 KVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAER 120
+ V++ E++S + + K +++ + K DY+HVRA+RGQAT+SHSLAER
Sbjct: 105 QTEVSSQQERISMEEDNQKSCSKMQSK-EDSSDGDGTKEDYVHVRAKRGQATNSHSLAER 163
Query: 121 VRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 180
+RR+KISERMK LQDLVPGC+KITGKA MLDEIINYVQSLQRQVEFLSMKLA VNP L F
Sbjct: 164 LRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPELSF 223
Query: 181 NVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEM 240
+++ + +K+ + G+ + A+ +Q + Q + C+ + NP+++
Sbjct: 224 DIEQILSKQMMLSQDRHLAFYGVDPGSSALVAHFNQ--GIMQPEMLCN-----VSNPADV 276
Query: 241 GLRRTISAPVS 251
L+ T +S
Sbjct: 277 -LQGTTIQDIS 286
>TAIR|locus:2053766 [details] [associations]
symbol:AT2G42300 "AT2G42300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005956 EMBL:AY065411 EMBL:AY096521 EMBL:AK175584
EMBL:AK176019 EMBL:AK176634 EMBL:AF488583 IPI:IPI00532521
PIR:C84852 RefSeq:NP_850368.1 UniGene:At.28495
ProteinModelPortal:Q8VZ02 SMR:Q8VZ02 EnsemblPlants:AT2G42300.1
GeneID:818831 KEGG:ath:AT2G42300 TAIR:At2g42300 eggNOG:NOG301522
HOGENOM:HOG000037005 InParanoid:Q8VZ02 OMA:PEWGREE PhylomeDB:Q8VZ02
ProtClustDB:CLSN2680198 Genevestigator:Q8VZ02 Uniprot:Q8VZ02
Length = 327
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 76/122 (62%), Positives = 95/122 (77%)
Query: 68 NEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKIS 127
N+ S+ +E KK K+ +N + E K Y+HVRARRGQATD+HSLAER RREKI+
Sbjct: 149 NQSYSSGKRKEREKKVKSSTKKNKSSVESDKLPYVHVRARRGQATDNHSLAERARREKIN 208
Query: 128 ERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFA 187
RMK LQ+LVPGC+KI G A +LDEIIN+VQ+LQRQVE LSM+LAAVNPR+DFN+D++ A
Sbjct: 209 ARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEMLSMRLAAVNPRIDFNLDSILA 268
Query: 188 KE 189
E
Sbjct: 269 SE 270
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 80/118 (67%), Positives = 88/118 (74%)
Query: 83 RKADKV--QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
R A K QN E K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC
Sbjct: 113 RNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 172
Query: 141 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNF 198
NK+ GKA +LDEIINY+Q+LQRQVEFLSMKL AVN ++ + EAFP P +F
Sbjct: 173 NKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNAHVNNGI------EAFP--PKDF 222
>TAIR|locus:2076581 [details] [associations]
symbol:AT3G57800 "AT3G57800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL049660 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000037005 ProtClustDB:CLSN2680198
EMBL:AF488593 EMBL:AL132977 EMBL:AY139773 EMBL:BT003037
EMBL:AY085849 IPI:IPI00532305 IPI:IPI00535946 PIR:T46002
RefSeq:NP_567057.2 RefSeq:NP_850745.1 UniGene:At.34797
ProteinModelPortal:Q3EAI1 EnsemblPlants:AT3G57800.1 GeneID:825530
KEGG:ath:AT3G57800 TAIR:At3g57800 eggNOG:NOG254513
InParanoid:Q3EAI1 OMA:MVASANL PhylomeDB:Q3EAI1
Genevestigator:Q3EAI1 Uniprot:Q3EAI1
Length = 426
Score = 216 (81.1 bits), Expect = 4.2e-33, Sum P(2) = 4.2e-33
Identities = 44/75 (58%), Positives = 56/75 (74%)
Query: 77 RESFKKR-KADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
R+ F+K+ K+ +N + E +K Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ+
Sbjct: 176 RKDFEKKGKSSTKKNKSSEENEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQE 235
Query: 136 LVPGCNKITGKAGML 150
LVPGC+K T G +
Sbjct: 236 LVPGCDKGTDFGGKI 250
Score = 172 (65.6 bits), Expect = 4.2e-33, Sum P(2) = 4.2e-33
Identities = 41/83 (49%), Positives = 51/83 (61%)
Query: 142 KITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTI 201
+I G A +LDEIIN+VQSLQRQVE LSM+LAAVNPR+DFN+D + A E + +F
Sbjct: 289 RIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASENGSLMDGSFNAA 348
Query: 202 GMSSEMTHPAAYLHQ-FNSLQQQ 223
M A Q F+ Q Q
Sbjct: 349 PMQLAWPQQAIETEQSFHHRQLQ 371
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 368 (134.6 bits), Expect = 6.2e-33, P = 6.2e-33
Identities = 89/185 (48%), Positives = 119/185 (64%)
Query: 77 RESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 136
RE + +K + AS + +Y+HVRA+RGQAT+SHSLAER RREKI+ERMK LQDL
Sbjct: 604 RELSMEHAGEKAGDADAS---REEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDL 660
Query: 137 VPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPS 196
VPGCNKITGKA MLDEIINYVQSLQRQVEFLSMKL+ ++P L+ ++D ++ +
Sbjct: 661 VPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISPELNSDLD---LQDILCSQDA 717
Query: 197 NFPTIGMSSEMT--HPAAYLHQFNSLQQQAVSCSGL--DLGIINPSEMGLRRTISAPVSA 252
+G S +++ HP Y QQ +S GL + + NP+++ L R S
Sbjct: 718 RSAFLGCSPQLSNAHPNLY-----RAAQQCLSPPGLYGSVCVPNPADVHLARA-GHLASF 771
Query: 253 PETFI 257
P+ +I
Sbjct: 772 PQVYI 776
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 75/114 (65%), Positives = 86/114 (75%)
Query: 76 GRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
G+ + + Q + E K DYIHVRARRGQATDSHSLAER RREKISERMK LQD
Sbjct: 109 GKAEAESLGTETEQKKQQMEPTK-DYIHVRARRGQATDSHSLAERARREKISERMKILQD 167
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
LVPGCNK+ GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++ ++ KE
Sbjct: 168 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIEVFPPKE 221
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 79/139 (56%), Positives = 98/139 (70%)
Query: 46 SSPPAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVR 105
S P+ + +G+ + + N K GR+S K+++ K E DYIHVR
Sbjct: 86 SHGPSAITNTGKTRGRKARNSNNSK-EGVEGRKSKKQKRGSK-------EEPPTDYIHVR 137
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
ARRGQATDSHSLAERVRREKISERM+ LQ+LVPGC+K+TGKA MLDEIINYVQ+LQ QVE
Sbjct: 138 ARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVE 197
Query: 166 FLSMKLAAVNPRL-DFNVD 183
FLSMKL +++P + DF D
Sbjct: 198 FLSMKLTSISPVVYDFGSD 216
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 322 (118.4 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 75/133 (56%), Positives = 86/133 (64%)
Query: 44 TSSSPPAVVPEAVDVKGKVSVAAL-NEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYI 102
+SSS + E+ D K K+ + N S E+ K K DYI
Sbjct: 92 SSSSSGNELKESGDKKRKLCGSESGNGDGSMRPEGETSSGGGGSKATEQKNKPEPPKDYI 151
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
HVRARRGQATD HSLAER RREKISE+M LQD++PGCNKI GKA +LDEIINY+QSLQR
Sbjct: 152 HVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQR 211
Query: 163 QVEFLSMKLAAVN 175
QVEFLSMKL VN
Sbjct: 212 QVEFLSMKLEVVN 224
Score = 43 (20.2 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 216 QFNSLQQQAVSC---SGLDLGIINPSEMG-----LRRTISAPVSAPETFIDSSCYPHLQP 267
+F S++ + V+ +G +G+ ++G + RTI A ET + + H+Q
Sbjct: 214 EFLSMKLEVVNSGASTGPTIGVFPSGDLGTLPIDVHRTIYEQQEANETRVSQPEWLHMQV 273
Query: 268 SSNWD 272
N++
Sbjct: 274 DGNFN 278
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 87/158 (55%), Positives = 97/158 (61%)
Query: 53 PEAVDVKGKVSVAALNEKVSAAVGRESFKKRKA-DKVQNTKASEVQKHDYIHVRARRGQA 111
PEA +K S + N+ + G +S KA DK N E K DYIHVRARRGQA
Sbjct: 79 PEAKRLKPMKS-SDKNDSLRTEAGTDSGNSSKAADK--NATPPEPPKQDYIHVRARRGQA 135
Query: 112 TDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF----- 166
TDSHSLAER RREKISERMK LQDLVPGCNK+ GKA +LDEIINY+QSLQ QVEF
Sbjct: 136 TDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFMFKYL 195
Query: 167 -------LSMKLAAVNPRLDFNVDNLFAKEAFPVCPSN 197
LSMKL AVN + N F + F P N
Sbjct: 196 IELFLQFLSMKLEAVNSHM-INGIVAFPSKDFGAQPYN 232
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 73/118 (61%), Positives = 83/118 (70%)
Query: 59 KGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLA 118
+ V + L EK + V K + E YIHVRARRGQATDSHSLA
Sbjct: 136 RSNVGLKGLEEKKARRVVLHQHDDDVKKKAKEAAGGEPPA-GYIHVRARRGQATDSHSLA 194
Query: 119 ERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNP 176
ERVRREKISERMK LQ LVPGC+K+TGKA MLDEII+YVQSLQ QVEFLSMKLA+++P
Sbjct: 195 ERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFLSMKLASLSP 252
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 76/133 (57%), Positives = 90/133 (67%)
Query: 54 EAVDV-KGKVSVAALNEKVSAAV---GRESFKKRKADKVQNTKASEVQKH-DYIHVRARR 108
EAV + VS L+ SA V G S K + + + +K E +K + +HVRARR
Sbjct: 93 EAVSTSENSVSDQTLSTS-SAQVSINGNISTKNNSSRRGKRSKNREEEKEREVVHVRARR 151
Query: 109 GQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
GQATDSHS+AERVRR KI+ER+K LQD+VPGC K G A MLDEIINYVQSLQ QVEFLS
Sbjct: 152 GQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLS 211
Query: 169 MKLAAVNPRLDFN 181
MKL A + DFN
Sbjct: 212 MKLTAASSYYDFN 224
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 66/108 (61%), Positives = 80/108 (74%)
Query: 75 VGRESFKKRKADKVQNTKASEVQKH-DYIHVRARRGQATDSHSLAERVRREKISERMKYL 133
+ E+ R+ +++ K E +K + +HVRARRGQATDSHSLAERVRR KI+ER++ L
Sbjct: 115 IATETGSLRRGKRLKKKKEEEDEKEREVVHVRARRGQATDSHSLAERVRRGKINERLRCL 174
Query: 134 QDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 181
QD+VPGC K G A MLDEIINYVQSLQ QVEFLSMKL A + DFN
Sbjct: 175 QDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSFYDFN 222
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 62/102 (60%), Positives = 79/102 (77%)
Query: 81 KKRKADKVQNTKASEVQK-HDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPG 139
+++++++ + E QK D +HVRA+RGQATDSHSLAERVRREKI+ER+K LQDLVPG
Sbjct: 80 RRKRSEEEEAMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPG 139
Query: 140 CNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 181
C K G A MLD II+YV+SLQ Q+EFLSMKL+A + D N
Sbjct: 140 CYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLN 181
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 56/96 (58%), Positives = 67/96 (69%)
Query: 88 VQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKA 147
V T A V++ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA
Sbjct: 85 VSTTSAPVVRQKP--RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKA 141
Query: 148 GMLDEIINYVQSLQRQVEFLSMK----LAAVNPRLD 179
MLDEII YV+ LQ QV+ LSM +V PRL+
Sbjct: 142 SMLDEIIEYVRFLQLQVKVLSMSRLGGAGSVGPRLN 177
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 52/94 (55%), Positives = 65/94 (69%)
Query: 76 GRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
G ++ + +A T + Q VRARRGQATD HS+AER+RRE+I+ERMK LQ+
Sbjct: 102 GGQTQTQSQATASATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQE 161
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 162 LVPNGNK-TDKASMLDEIIDYVKFLQLQVKVLSM 194
>UNIPROTKB|Q69WX7 [details] [associations]
symbol:P0417G12.19 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 GO:GO:0005634 Gene3D:4.10.280.10
EMBL:AP003626 EMBL:AP003711 EMBL:AK070970
EnsemblPlants:LOC_Os06g41060.1 OMA:KNGMDLE Uniprot:Q69WX7
Length = 154
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 58/126 (46%), Positives = 78/126 (61%)
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN-VDNLFAK 188
M+ L++LVPGC+K++G A +LDEIIN+VQSLQRQVE+LSM+LAAVNPR+DF +DN
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDNFLTT 60
Query: 189 EAFPVCPSNFPTIGMSSE-MTHPAAYLHQFNSLQQ-QAVSCSGLDLG--IINPSEMGLRR 244
E + N+ GM E +T P +H +L Q Q G DL + PS+ R
Sbjct: 61 ECGRITGLNYKN-GMDLEQVTWPDMGVHGARNLMQLQQQFWHG-DLAHPLQPPSQWEKRT 118
Query: 245 TISAPV 250
+ PV
Sbjct: 119 DTNPPV 124
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 229 (85.7 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 51/71 (71%), Positives = 59/71 (83%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RREKIS+RMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQLQ 372
Query: 164 VEFLSM-KLAA 173
V+ LSM +L A
Sbjct: 373 VKVLSMSRLGA 383
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 222 (83.2 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 47/66 (71%), Positives = 56/66 (84%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 138 IRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQLQ 196
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 197 VKVLSM 202
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 219 (82.2 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 57/102 (55%), Positives = 68/102 (66%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RARRGQATD HS+AER+RREKISERMK LQ LVP NK KA MLDEII+YV+ LQ QV
Sbjct: 240 RARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQLQV 298
Query: 165 EFLSM-KLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSS 205
+ LSM +L A L +E+ C SN P++ S+
Sbjct: 299 KVLSMSRLGAPGAVLPL------LRESQTECHSN-PSLSAST 333
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 44/66 (66%), Positives = 56/66 (84%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 133 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 191
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 192 VKVLSM 197
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 214 (80.4 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 45/64 (70%), Positives = 54/64 (84%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI--TGKAGMLDEIINYVQSLQ 161
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK+ T KA MLDEII+YV+ LQ
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQ 309
Query: 162 RQVE 165
QV+
Sbjct: 310 LQVK 313
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 206 (77.6 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 42/66 (63%), Positives = 56/66 (84%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 202
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 203 VKVLSM 208
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 206 (77.6 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 42/66 (63%), Positives = 56/66 (84%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 205 VKVLSM 210
>UNIPROTKB|Q6Z1F9 [details] [associations]
symbol:OSJNBa0033D24.39 "BHLH transcription factor-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 GO:GO:0005634
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005439
EMBL:AP004464 RefSeq:NP_001062365.1 UniGene:Os.89290 GeneID:4346166
KEGG:osa:4346166 Uniprot:Q6Z1F9
Length = 143
Score = 183 (69.5 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 37/56 (66%), Positives = 48/56 (85%)
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNVDN 184
M+ LQ LVPGC+K+TGKA +LDEIINYVQSLQ QVEFLSM++A+++P L F +D+
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGMDS 56
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 195 (73.7 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 44/125 (35%), Positives = 71/125 (56%)
Query: 50 AVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRA--- 106
A+ A+++ G S ++ +KRK + T +E + + R
Sbjct: 219 AMTAPAIEITGTSSSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTT 278
Query: 107 --RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK + KA MLDE I Y++SLQ Q+
Sbjct: 279 STKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQI 337
Query: 165 EFLSM 169
+ +SM
Sbjct: 338 QMMSM 342
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 195 (73.7 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 46/115 (40%), Positives = 69/115 (60%)
Query: 66 ALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIH--VRARRGQATDSHSLAERVRR 123
A E+V RE+ K DK + +E+Q + H +R +A D H+L+ER RR
Sbjct: 313 AETERVQIQPERET--KITEDKKREETIAEIQGTEEAHGSTSRKRSRAADMHNLSERRRR 370
Query: 124 EKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
E+I+ERMK LQ+L+P C K T K ML+++I YV+SLQ Q++ +SM + P +
Sbjct: 371 ERINERMKTLQELLPRCRK-TDKVSMLEDVIEYVKSLQLQIQMMSMGHGMMPPMM 424
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 167 (63.8 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 69 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 128
Query: 164 VEFLS 168
V+ L+
Sbjct: 129 VKGLN 133
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 185 (70.2 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 64/204 (31%), Positives = 102/204 (50%)
Query: 38 SYAISRTSSSPPAVVPEAVDVKGKVSVAALNEKVSA-AVGRESFKKRKADKVQNTKASEV 96
S + R+ + + P A G S + + + A GR RK ++ +T S V
Sbjct: 178 SMSHDRSKNIEEKLNPNASSSSGGSSGCSFGKDIKEMASGRCITTDRKRKRINHTDES-V 236
Query: 97 QKHDYIHVRA-------RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 149
D I ++ RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T KA +
Sbjct: 237 SLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASI 295
Query: 150 LDEIINYVQSLQRQVEFL----SMKLAAVNPRLDF-NVD-NLFAKEA-FPVCPSNFPTIG 202
LDE I+Y++SLQ Q++ + M AA + + F V F ++ PV FP +
Sbjct: 296 LDEAIDYLKSLQLQLQVMWMGSGMAAAAASAPMMFPGVQPQQFIRQIQSPVQLPRFPVMD 355
Query: 203 MSSEMTHPAAYLHQFNSLQQQAVS 226
S+ +P N +Q Q +S
Sbjct: 356 QSAIQNNPGLVCQ--NPVQNQIIS 377
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 180 (68.4 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 51/139 (36%), Positives = 76/139 (54%)
Query: 39 YAISRTSSSPPAVVPEAVDVKGKVSVAALNEKV-SAAVGRESFKKRKADKVQNTKASEVQ 97
Y S +S PA P++ VS+A K S+A + R A ++Q T+ +
Sbjct: 89 YLCSELYASTPAPHPQS-----SVSLAPPPPKPPSSAPYGQIIAPRSAPRIQGTEEARGS 143
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
+R +A + H+LAER RREKI+ERMK LQ L+P CNK T K ML+++I YV
Sbjct: 144 ------TSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKST-KVSMLEDVIEYV 196
Query: 158 QSLQRQV-EFLSMKLAAVN 175
+SL+ Q+ +F+ +N
Sbjct: 197 KSLEMQINQFMPHMAMGMN 215
>UNIPROTKB|Q6K8Y4 [details] [associations]
symbol:OJ1695_H09.18 "Basic helix-loop-helix (BHLH)-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000239571 EMBL:AP003975 EMBL:AP004094
EnsemblPlants:LOC_Os02g55250.1 OMA:GQDDFFD Uniprot:Q6K8Y4
Length = 463
Score = 150 (57.9 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 33/49 (67%), Positives = 40/49 (81%)
Query: 121 VRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 251 LRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 298
Score = 76 (31.8 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 105 RARRGQATDSHSLAERV 121
RARRGQATD HS+AERV
Sbjct: 213 RARRGQATDPHSIAERV 229
>TAIR|locus:2141573 [details] [associations]
symbol:FBH2 "AT4G09180" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL161514 HOGENOM:HOG000095218 ProtClustDB:CLSN2679906
EMBL:AF488613 EMBL:BT010423 EMBL:AK230384 IPI:IPI00545642
PIR:B85093 RefSeq:NP_192657.1 UniGene:At.33710
ProteinModelPortal:Q9M0R0 SMR:Q9M0R0 PaxDb:Q9M0R0 PRIDE:Q9M0R0
EnsemblPlants:AT4G09180.1 GeneID:826499 KEGG:ath:AT4G09180
TAIR:At4g09180 eggNOG:NOG277140 InParanoid:Q9M0R0 OMA:MENLMED
PhylomeDB:Q9M0R0 Genevestigator:Q9M0R0 Uniprot:Q9M0R0
Length = 262
Score = 170 (64.9 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 35/65 (53%), Positives = 49/65 (75%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV+ LQRQ
Sbjct: 184 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQ 243
Query: 164 VEFLS 168
++ L+
Sbjct: 244 IQELT 248
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 173 (66.0 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 55/167 (32%), Positives = 83/167 (49%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 166 FLSMKLAA-VNPR-LDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQ 223
LSM+ +NP L ++ A + F N T+ HP + N Q
Sbjct: 158 MLSMRNGVYLNPSYLSGALEPAQASQMFAALGGNNVTV------VHPGTVMPPVN----Q 207
Query: 224 AVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSN 270
+ L +N +++ P S P T I + HL+ S +
Sbjct: 208 SSGAHHL-FDPLNSPPQNQPQSLILP-SVPSTAIPEPPF-HLESSQS 251
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 156 (60.0 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 30/63 (47%), Positives = 47/63 (74%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
RR ++ + H+ +ER RR++I+E++K LQ+L+P C K T K MLDE I+Y++SLQ Q++
Sbjct: 10 RRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQM 68
Query: 167 LSM 169
L M
Sbjct: 69 LVM 71
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 156 (60.0 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 46/139 (33%), Positives = 76/139 (54%)
Query: 41 ISRTSSSPPAVVPEAVDVKG-KVSVAALNEKVSAAVGRESFKKRKADKVQ-NTKASEVQK 98
+SRT ++ P+ P++ +V + +++ ++VG + DK K S ++
Sbjct: 27 LSRTPTAQPSSPPKSTNVSSAETFFPSVSGGAVSSVGY-GVSETGQDKYAFEHKRSGAKQ 85
Query: 99 HDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQ 158
+ + +R H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++
Sbjct: 86 RNSL----KRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLK 140
Query: 159 SLQRQVEFLS-MKLAAVNP 176
LQ QV+ L+ M +NP
Sbjct: 141 QLQLQVQTLAVMNGLGLNP 159
>TAIR|locus:2059979 [details] [associations]
symbol:FBH4 "AT2G42280" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0046685
"response to arsenic-containing substance" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC002561 GO:GO:0048573
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG312535
HOGENOM:HOG000242890 EMBL:BT015339 EMBL:BT015712 EMBL:AK228981
IPI:IPI00530686 IPI:IPI00538142 PIR:T00937 RefSeq:NP_181757.2
RefSeq:NP_973670.1 UniGene:At.12448 UniGene:At.43726
ProteinModelPortal:Q66GR3 SMR:Q66GR3 PRIDE:Q66GR3
EnsemblPlants:AT2G42280.1 GeneID:818829 KEGG:ath:AT2G42280
TAIR:At2g42280 InParanoid:Q66GR3 OMA:NDNRANC PhylomeDB:Q66GR3
ProtClustDB:CLSN2681218 Genevestigator:Q66GR3 Uniprot:Q66GR3
Length = 359
Score = 174 (66.3 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 38/84 (45%), Positives = 55/84 (65%)
Query: 85 ADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIT 144
+D V K ++Q +RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T
Sbjct: 260 SDMVSVDKYLQLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQT 319
Query: 145 GKAGMLDEIINYVQSLQRQVEFLS 168
+ MLD ++Y++ LQRQ + L+
Sbjct: 320 NTSDMLDLAVDYIKDLQRQYKILN 343
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 175 (66.7 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 48/130 (36%), Positives = 73/130 (56%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ T KA +LDE I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQV 311
Query: 167 LSM-------KLAAVNPRLDFNVD-----NLFAKEAFPVCPSNFPTIGMSSEMTHPAAYL 214
+ M AA +P + V N A ++ + S FP + S+ HP
Sbjct: 312 MWMGSGMAAAAAAAASPMMFPGVQSSPYINQMAMQS-QMQLSQFPVMNRSAPQNHPGLVC 370
Query: 215 HQFNSLQQQA 224
LQ QA
Sbjct: 371 QNPVQLQLQA 380
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 176 (67.0 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 50/159 (31%), Positives = 83/159 (52%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNKI KA MLDE I Y+++LQ QV+
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 367
Query: 167 LSMKLAAVNPRLDFNVDNLFAKEAFPVCP-SNFPTIGMSSEMTHPAAYLHQFNSLQQQAV 225
+SM P + A + + P ++FP +GM + +LQ +
Sbjct: 368 MSMGTGLCIPPMLLPT----AMQHLQIPPMAHFPHLGMGLGYGMGVFDMSNTGALQMPPM 423
Query: 226 SCSGLDLGII---NPSEMGLRRTISAPV-SAPETFIDSS 260
+ +I +P +G+ T + P+ P I SS
Sbjct: 424 PGAHFPCPMIPGASPQGLGIPGTSTMPMFGVPGQTIPSS 462
>TAIR|locus:2008693 [details] [associations]
symbol:FBH1 "AT1G35460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488612 EMBL:AC023064 EMBL:AF411791 EMBL:AY093794
IPI:IPI00538359 PIR:F86475 RefSeq:NP_174776.1 UniGene:At.18017
ProteinModelPortal:Q9C8P8 SMR:Q9C8P8 PRIDE:Q9C8P8
EnsemblPlants:AT1G35460.1 GeneID:840438 KEGG:ath:AT1G35460
TAIR:At1g35460 eggNOG:NOG263612 HOGENOM:HOG000095218
InParanoid:Q9C8P8 OMA:NLCLTEL PhylomeDB:Q9C8P8
ProtClustDB:CLSN2679906 Genevestigator:Q9C8P8 Uniprot:Q9C8P8
Length = 259
Score = 167 (63.8 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV++LQ Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240
Query: 164 VEFLS 168
++ L+
Sbjct: 241 IQELT 245
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 174 (66.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 32/64 (50%), Positives = 51/64 (79%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R ++ + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y++SLQ QV+
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKSLQLQVQ 397
Query: 166 FLSM 169
+SM
Sbjct: 398 IMSM 401
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 171 (65.3 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 38/98 (38%), Positives = 58/98 (59%)
Query: 81 KKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
K R+ V+N E + ++R +A H L+ER RR+KI+E MK LQ+L+P C
Sbjct: 252 KTREETNVENQGTEEARDS----TSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRC 307
Query: 141 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
K T ++ MLD++I YV+SLQ Q++ SM + P +
Sbjct: 308 TK-TDRSSMLDDVIEYVKSLQSQIQMFSMGHVMIPPMM 344
>TAIR|locus:2026037 [details] [associations]
symbol:FBH3 "AT1G51140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048573 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC079828 EMBL:AY034941 EMBL:AY063120
IPI:IPI00519239 PIR:H96548 RefSeq:NP_564583.1 UniGene:At.19155
ProteinModelPortal:Q9C690 SMR:Q9C690 PaxDb:Q9C690 PRIDE:Q9C690
EnsemblPlants:AT1G51140.1 GeneID:841537 KEGG:ath:AT1G51140
TAIR:At1g51140 eggNOG:NOG312535 HOGENOM:HOG000242890
InParanoid:Q9C690 OMA:TKDEDSA PhylomeDB:Q9C690
ProtClustDB:CLSN2917227 Genevestigator:Q9C690 Uniprot:Q9C690
Length = 379
Score = 169 (64.5 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 36/64 (56%), Positives = 45/64 (70%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR KISERM+ LQDLVP + T A MLD + Y++ LQ Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363
Query: 164 VEFL 167
V+ L
Sbjct: 364 VKAL 367
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 165 (63.1 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 41/114 (35%), Positives = 65/114 (57%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLD+ I Y++ LQ QV
Sbjct: 27 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQLQLQV 85
Query: 165 EFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFN 218
+ LSM+ P + N+ A E P+ + S++ + P+ L N
Sbjct: 86 QMLSMRNGLYLPPV--NLSG--APEHLPIPQMSAALDQNSAKASDPSVVLQPVN 135
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 167 (63.8 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 37/96 (38%), Positives = 62/96 (64%)
Query: 80 FKKRKADKVQN-TKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVP 138
FK+ + + V + ++ ++ + RR +A + H+L+ER RR++I+E+++ LQ+LVP
Sbjct: 197 FKRGREELVDSLSEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVP 256
Query: 139 GCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAV 174
CNK T KA +LDE I Y++SLQ QV+ + M V
Sbjct: 257 HCNK-TDKASILDEAIEYLKSLQMQVQIMWMTTGIV 291
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 163 (62.4 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 49/127 (38%), Positives = 65/127 (51%)
Query: 50 AVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRG 109
AV EA A E V ES K KA + T +E + +R
Sbjct: 202 AVAVEAAGTPSSGVCKAETEPVQIQPATES--KLKAR--EETHGTEEARGS---TSRKRS 254
Query: 110 QATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE-FLS 168
+ + H+LAER RREKI+E+MK LQ L+P CNK T K LD+ I YV+SLQ Q++ +S
Sbjct: 255 RTAEMHNLAERRRREKINEKMKTLQQLIPRCNKST-KVSTLDDAIEYVKSLQSQIQGMMS 313
Query: 169 MKLAAVN 175
+ A N
Sbjct: 314 PMMNAGN 320
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 161 (61.7 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 45/135 (33%), Positives = 72/135 (53%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
V +R +A H+ +ER RR+KI++RMK LQ LVP +K T KA MLDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 265
Query: 164 VEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQ 223
V +S ++ + L + ++ + + P +G+ M P L NS+ +
Sbjct: 266 VSMMS-RMNMPSMMLPMAMQQ---QQQLQMSLMSNP-MGLGMGMGMPGLGLLDLNSMNRA 320
Query: 224 AVSCSGLDLGII-NP 237
A S + ++ NP
Sbjct: 321 AASAPNIHANMMPNP 335
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 159 (61.0 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 32/65 (49%), Positives = 48/65 (73%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+E+ RR +I+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 193 SKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 251
Query: 166 FLSMK 170
L+M+
Sbjct: 252 MLTMR 256
>UNIPROTKB|Q2QMM0 [details] [associations]
symbol:LOC_Os12g40710 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 Gramene:Q2QMM0 Uniprot:Q2QMM0
Length = 266
Score = 154 (59.3 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 42/124 (33%), Positives = 68/124 (54%)
Query: 46 SSPPAVVPEAVDVKGKVSVAALN-EKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHV 104
++PPA + +D V+ +N ++ S G KK+KA ++ A + +H +
Sbjct: 30 AAPPAPEKKQMDNMPAVASPTMNKDEASDDSGERKKKKKKA----SSAAGKASRHRH--- 82
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
A +H+L E+ RR KI+ER + LQ LVPGC+ + +A LD+ I Y++SLQ Q+
Sbjct: 83 ------AAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQL 136
Query: 165 EFLS 168
E S
Sbjct: 137 EATS 140
>UNIPROTKB|Q7XT55 [details] [associations]
symbol:OSJNBa0084K20.3 "OSJNBa0076N16.1 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000141 EMBL:AL606613 EMBL:AL731617 Uniprot:Q7XT55
Length = 218
Score = 149 (57.5 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 32/72 (44%), Positives = 49/72 (68%)
Query: 98 KHDYI--HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIIN 155
+HD + VRA+RG AT S+AER RR +ISE+++ LQ LVP +K T + MLD ++
Sbjct: 126 QHDQVPFRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVD 185
Query: 156 YVQSLQRQVEFL 167
+++ LQ Q++ L
Sbjct: 186 HIKGLQSQLQTL 197
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 53/183 (28%), Positives = 88/183 (48%)
Query: 102 IHVRAR-----RGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 156
+H R R R ++T+ H L ER RR++ +++M+ LQDL+P C K KA +LDE I Y
Sbjct: 216 VHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYK-DDKASLLDEAIKY 274
Query: 157 VQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAA--YL 214
+++LQ QV+ +SM + P P+ ++ +G+ M A +
Sbjct: 275 MRTLQLQVQMMSMGNGLIRP-----------PTMLPM--GHYSPMGLGMHMGAAATPTSI 321
Query: 215 HQFNSLQQQAVSCSGLD------LGIIN-PSEMGLRRTISAPV-SAPETFIDSSCYPHLQ 266
QF + QA G++ L +N PS + I +P+ + + F+ SC Q
Sbjct: 322 PQFLPMNVQATGFPGMNNAPPQMLSFLNHPSGLIPNTPIFSPLENCSQPFVVPSCVSQTQ 381
Query: 267 PSS 269
+S
Sbjct: 382 ATS 384
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 146 (56.5 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RA +G ATD SL R RREKI+ER+K LQ+LVP K+ ML+E ++YV+ LQ Q+
Sbjct: 168 RATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDIST-MLEEAVHYVKFLQLQI 226
Query: 165 EFLS 168
+ LS
Sbjct: 227 KLLS 230
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 149 (57.5 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 35/101 (34%), Positives = 63/101 (62%)
Query: 72 SAAVG-RESFKKRKADKVQNTKASEVQ-KHDYIHVRARRGQATDSHSLAERVRREKISER 129
+A G R+ F R + Q+T+ E + + + RRG+A H+ +ER RR++I++R
Sbjct: 128 TARTGDRDYF--RSGSETQDTEGDEQETRGEAGRSNGRRGRAAAIHNESERRRRDRINQR 185
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMK 170
M+ LQ L+P +K K +LD++I +++ LQ QV+F+S++
Sbjct: 186 MRTLQKLLPTASK-ADKVSILDDVIEHLKQLQAQVQFMSLR 225
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 146 (56.5 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 40/88 (45%), Positives = 54/88 (61%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RA RG ATD SL R RRE+I+ER+K LQ+LVP K+ ML+E ++YV+ LQ Q+
Sbjct: 217 RAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKVDIST-MLEEAVHYVKFLQLQI 275
Query: 165 EFLS---MKLAA------VNPRLDFNVD 183
+ LS M + A +N LD N+D
Sbjct: 276 KLLSSDEMWMYAPIAYNGMNIGLDLNID 303
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 143 (55.4 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 111 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMK 170
+TD S+A R+RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ L +
Sbjct: 158 STDPQSVAARMRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKTQVQSLE-R 215
Query: 171 LAAVN 175
AA N
Sbjct: 216 AAAAN 220
>UNIPROTKB|Q2QMN2 [details] [associations]
symbol:LOC_Os12g40590 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 EMBL:CM000149 eggNOG:NOG272270
KEGG:dosa:Os12t0597800-01 Uniprot:Q2QMN2
Length = 265
Score = 143 (55.4 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 36/97 (37%), Positives = 60/97 (61%)
Query: 84 KADKVQNTKASEVQKHDYIHVRARRGQA-TDSHSLAERVRREKISERMKYLQDLVPGCNK 142
K DK T+ E ++ + +ARR ++H L E+ RR +I+E+ K LQ LVPGC+K
Sbjct: 128 KMDKKLPTRTEERRR---VKHKARRNPGYAETHGLTEKRRRSRINEKFKMLQRLVPGCDK 184
Query: 143 ITGKAGMLDEIINYVQSLQRQVEFL---SMKLAAVNP 176
+ ++ LD I+Y++SLQ+Q++ + ++ AAV P
Sbjct: 185 CS-QSSTLDRTIHYMKSLQQQLQAMYPTMVRPAAVYP 220
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 146 (56.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 38/101 (37%), Positives = 60/101 (59%)
Query: 111 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMK 170
+TD ++A R RRE+ISE+++ LQ LVPG K+ A MLDE NY++ L+ QV+ L
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTKMD-TASMLDEAANYLKFLRAQVKALEN- 333
Query: 171 LAAVNPRLD-FNVDNLFAKEAFPVCPSNFPTIGMSSEMTHP 210
+ P+LD N+ A +FP+ +F + +++ HP
Sbjct: 334 ---LRPKLDQTNLSFSSAPTSFPLFHPSFLPLQNPNQIHHP 371
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 144 (55.7 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RA RG ATD SL R RRE+I+ER++ LQ+LVP K+ ML+E ++YV+ LQ Q+
Sbjct: 267 RASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDIST-MLEEAVHYVKFLQLQI 325
Query: 165 EFLS 168
+ LS
Sbjct: 326 KLLS 329
>TAIR|locus:505006103 [details] [associations]
symbol:AT1G05805 "AT1G05805" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC009999 HOGENOM:HOG000242890 EMBL:BT000954 EMBL:AY086106
IPI:IPI00516925 PIR:F86192 RefSeq:NP_563749.1 UniGene:At.11933
ProteinModelPortal:Q8H102 SMR:Q8H102 IntAct:Q8H102 STRING:Q8H102
PaxDb:Q8H102 PRIDE:Q8H102 EnsemblPlants:AT1G05805.1 GeneID:837090
KEGG:ath:AT1G05805 TAIR:At1g05805 eggNOG:NOG249421
InParanoid:Q8H102 OMA:NEVNETP PhylomeDB:Q8H102
ProtClustDB:CLSN2687697 Genevestigator:Q8H102 Uniprot:Q8H102
Length = 362
Score = 144 (55.7 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 342
Query: 164 VEFL 167
++ L
Sbjct: 343 LQNL 346
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 136 (52.9 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 32/61 (52%), Positives = 42/61 (68%)
Query: 113 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLA 172
D S+A R+RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ L A
Sbjct: 150 DPQSVAARLRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKSQVQSLERAAA 208
Query: 173 A 173
A
Sbjct: 209 A 209
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 133 (51.9 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 34/81 (41%), Positives = 49/81 (60%)
Query: 88 VQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKA 147
V NT S +K +A RG A+D SL R RRE+I++R+K LQ LVP K+
Sbjct: 121 VSNTSKSLKRK-----AKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDIST 175
Query: 148 GMLDEIINYVQSLQRQVEFLS 168
ML++ ++YV+ LQ Q++ LS
Sbjct: 176 -MLEDAVHYVKFLQLQIKLLS 195
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 133 (51.9 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 33/63 (52%), Positives = 44/63 (69%)
Query: 113 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLA 172
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L++QV+ L + A
Sbjct: 128 DPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKKQVQSLE-EHA 185
Query: 173 AVN 175
VN
Sbjct: 186 VVN 188
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 132 (51.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 30/56 (53%), Positives = 39/56 (69%)
Query: 113 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L+
Sbjct: 128 DPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLLN 182
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 130 (50.8 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 30/55 (54%), Positives = 40/55 (72%)
Query: 113 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I+YV+ L++QV+ L
Sbjct: 131 DPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKKQVQSL 184
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 125 (49.1 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 122 RREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS------MKLAAVN 175
RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ LQ QV+ +S M +
Sbjct: 13 RRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIDYLKQLQAQVQVMSRMGSMMMPMGMAM 71
Query: 176 PRLDFNV 182
P+L +V
Sbjct: 72 PQLQMSV 78
>UNIPROTKB|Q6AV35 [details] [associations]
symbol:OSJNBa0063J18.7 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140
EMBL:AC107206 RefSeq:NP_001050667.1 UniGene:Os.79759
EnsemblPlants:LOC_Os03g42100.1 GeneID:4333457 KEGG:osa:4333457
eggNOG:NOG300710 OMA:CTSENDS ProtClustDB:CLSN2694086 Uniprot:Q6AV35
Length = 310
Score = 131 (51.2 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 40/113 (35%), Positives = 60/113 (53%)
Query: 59 KGKVSVAALNEKVSAAV-GRESFK--KRKADKVQNTKASEVQKHDYIHVRARRGQATDSH 115
+GK + E S AV R+S + D + ++ S V ++ ATD
Sbjct: 174 RGKKAAQCEGEDGSIAVTNRQSLSCCTSENDSI-GSQESPVAAKSNGKAQSGHRSATDPQ 232
Query: 116 SLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
SL R RRE+I+ER+K LQ+LVP K+ ML+E ++YV+ LQ Q++ LS
Sbjct: 233 SLYARKRRERINERLKILQNLVPNGTKVDIST-MLEEAMHYVKFLQLQIKLLS 284
>UNIPROTKB|Q651K2 [details] [associations]
symbol:B1089G05.30 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CM000143 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005967 EnsemblPlants:LOC_Os06g30090.1 Uniprot:Q651K2
Length = 294
Score = 126 (49.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 40/130 (30%), Positives = 64/130 (49%)
Query: 39 YAISRTSSSPPAVVPEAVDV-KGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQ 97
Y + +SSP + G V V + +AA G + +R + SE+
Sbjct: 130 YGPTAATSSPSSCFSSGGSGDSGMVMVTTTTPRSAAASGSQ---RRARPPPSPLQGSEL- 185
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
H+Y + +R ++ S A + RRE+ISER++ LQ+LVP K+ MLD I+YV
Sbjct: 186 -HEYS--KKQRANNKETQSSAAKSRRERISERLRALQELVPSGGKVD-MVTMLDRAISYV 241
Query: 158 QSLQRQVEFL 167
+ +Q Q+ L
Sbjct: 242 KFMQMQLRVL 251
>UNIPROTKB|Q9ASJ3 [details] [associations]
symbol:P0439B06.24 "Putative uncharacterized protein
P0439B06.24" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP002882 UniGene:Os.30617
ProteinModelPortal:Q9ASJ3 Gramene:Q9ASJ3 OMA:KAITYVK
ProtClustDB:CLSN2918925 Uniprot:Q9ASJ3
Length = 294
Score = 126 (49.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 29/53 (54%), Positives = 38/53 (71%)
Query: 116 SLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
S A +VRRE+ISER+K LQDLVP K+ ML++ INYV+ LQ QV+ L+
Sbjct: 210 SAAAKVRRERISERLKVLQDLVPNGTKVD-LVTMLEKAINYVKFLQLQVKVLA 261
>UNIPROTKB|Q69TX2 [details] [associations]
symbol:P0021C04.13 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004687
ProteinModelPortal:Q69TX2 EnsemblPlants:LOC_Os06g10820.1
Gramene:Q69TX2 HOGENOM:HOG000241748 Uniprot:Q69TX2
Length = 211
Score = 122 (48.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/74 (41%), Positives = 47/74 (63%)
Query: 105 RARRGQA---TDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 161
R RR A ++ S+A R+RRE++S+RM+ LQ LVPG ++ A ML+E I YV+ L+
Sbjct: 112 RPRRRNARVSSEPQSVAARLRRERVSQRMRALQRLVPGGARLD-TASMLEEAIRYVKFLK 170
Query: 162 RQVEFLSMKLAAVN 175
V+ L AA++
Sbjct: 171 GHVQSLERAAAALH 184
>UNIPROTKB|Q8W5G3 [details] [associations]
symbol:OSJNBa0002J24.23 "Helix-loop-helix DNA-binding
domain containing protein, expressed" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000140 HOGENOM:HOG000240244 EMBL:AC090713
EnsemblPlants:LOC_Os03g55550.1 eggNOG:NOG237829 OMA:WIWERRR
Uniprot:Q8W5G3
Length = 310
Score = 124 (48.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 37/107 (34%), Positives = 53/107 (49%)
Query: 59 KGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLA 118
K K V+ + S G S + +V K V V ARR AT + SL
Sbjct: 165 KKKARVSDKRNQESMQSGSCSDNESNCSQVNRRKVDRVAGGGNGKVPARRRSATIAQSLY 224
Query: 119 ERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
R RRE+I+ R++ LQ LVP K+ ML+E ++YV+ LQ Q++
Sbjct: 225 ARRRRERINGRLRILQKLVPNGTKVDIST-MLEEAVHYVKFLQLQIK 270
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 125 (49.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 39/110 (35%), Positives = 52/110 (47%)
Query: 60 GKVSVAALNEKVSAAVGRESFKKRKADK--VQNTKASEVQKHDYIHVRARRGQATDSHSL 117
G S AAL K F + + K A++V K +R H L
Sbjct: 126 GGASAAALKPKQELDAAAAPFSQARPVKRSYDAMVAADVAKAPAA-AASRPASQNQEHIL 184
Query: 118 AERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
AER RREK+S+R L +VPG K+ KA +L + I YV+ LQ QV+ L
Sbjct: 185 AERKRREKLSQRFIALSKIVPGLKKMD-KASVLGDAIKYVKQLQDQVKGL 233
>UNIPROTKB|Q8S0N2 [details] [associations]
symbol:P0692C11.41-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 EMBL:AP003381 EMBL:AP003273 EMBL:AK106119
RefSeq:NP_001044022.1 UniGene:Os.25546 GeneID:4327679
KEGG:osa:4327679 eggNOG:NOG254276 OMA:EPDMEAM
ProtClustDB:CLSN2919059 Uniprot:Q8S0N2
Length = 393
Score = 125 (49.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 26/57 (45%), Positives = 42/57 (73%)
Query: 111 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
++D ++A R+RRE++S+R++ LQ LVPG NK+ A MLDE +Y++ L+ QV+ L
Sbjct: 282 SSDPQTVAARLRRERVSDRLRVLQKLVPGGNKMD-TASMLDEAASYLKFLKSQVQKL 337
>UNIPROTKB|Q2R0R9 [details] [associations]
symbol:LOC_Os11g41640 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240244 KEGG:dosa:Os11t0634700-00 Gramene:Q2R0R9
OMA:SLYAKRR Uniprot:Q2R0R9
Length = 246
Score = 121 (47.7 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 31/83 (37%), Positives = 47/83 (56%)
Query: 86 DKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITG 145
D + T S V K + R + + D+ SL + RRE+I+ER++ LQ LVP K+
Sbjct: 138 DSIAATDGSVVLKQSD-NSRGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDI 196
Query: 146 KAGMLDEIINYVQSLQRQVEFLS 168
ML+E + YV+ LQ Q++ LS
Sbjct: 197 ST-MLEEAVQYVKFLQLQIKLLS 218
>TAIR|locus:2205455 [details] [associations]
symbol:BIM2 "AT1G69010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011665 EMBL:BT002352 EMBL:AY080650 EMBL:AY086798
EMBL:AF488627 IPI:IPI00519398 PIR:E96714 RefSeq:NP_177064.1
UniGene:At.35458 ProteinModelPortal:Q9CAA4 SMR:Q9CAA4 PaxDb:Q9CAA4
PRIDE:Q9CAA4 EnsemblPlants:AT1G69010.1 GeneID:843233
KEGG:ath:AT1G69010 TAIR:At1g69010 eggNOG:NOG246683
HOGENOM:HOG000070523 InParanoid:Q9CAA4 OMA:YVQYLQE PhylomeDB:Q9CAA4
ProtClustDB:CLSN2682349 Genevestigator:Q9CAA4 GermOnline:AT1G69010
Uniprot:Q9CAA4
Length = 311
Score = 112 (44.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 76 GRESFKKRKADKVQNTKA-SEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQ 134
G E F ++ NT S + A R + HS+ E+ RR KI+ER + L+
Sbjct: 14 GEEDFNSKREGPSSNTTVHSNRDSKENDKASAIRSK----HSVTEQRRRSKINERFQILR 69
Query: 135 DLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
+L+P + A L E+I+YVQ LQ +V+
Sbjct: 70 ELIPNSEQKRDTASFLLEVIDYVQYLQEKVQ 100
Score = 48 (22.0 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 159 SLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEM-------THPA 211
S++ Q E L + P L V A E CP+ +G S+++ + +
Sbjct: 181 SIESQPELDDKGLPPLQPILPM-VQGEQANE----CPATSDGLGQSNDLVIEGGTISISS 235
Query: 212 AYLHQFNSLQQQAVSCSGLDL 232
AY H+ S QA+ +G+DL
Sbjct: 236 AYSHELLSSLTQALQNAGIDL 256
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 124 (48.7 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 24/58 (41%), Positives = 41/58 (70%)
Query: 110 QATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
+ T +H+L+E+ RREK++ER L+ ++P +KI K +LD+ I Y+Q LQ++V+ L
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISKID-KVSILDDTIEYLQDLQKRVQEL 457
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 119 (46.9 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 113 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
D SLA + RRE+ISER+K LQ+LVP K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 204 DPQSLAAKNRRERISERLKILQELVPNGTKVD-LVTMLEKAISYVKFLQVQVKVLA 258
>UNIPROTKB|Q5TKP7 [details] [associations]
symbol:OJ1362_G11.11 "Putative uncharacterized protein
OJ1362_G11.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC104713 ProteinModelPortal:Q5TKP7
EnsemblPlants:LOC_Os05g46370.1 KEGG:dosa:Os05t0541400-00
Gramene:Q5TKP7 HOGENOM:HOG000238211 Uniprot:Q5TKP7
Length = 416
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 26/57 (45%), Positives = 42/57 (73%)
Query: 111 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
++D ++A R+RRE++SER++ LQ LVPG +K+ A MLDE +Y++ L+ Q+E L
Sbjct: 304 SSDPQTVAARLRRERVSERLRVLQRLVPGGSKMD-TATMLDEAASYLKFLKSQLEAL 359
>TAIR|locus:2204898 [details] [associations]
symbol:HFR1 "AT1G02340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009585 "red, far-red light
phototransduction" evidence=TAS] [GO:0009642 "response to light
intensity" evidence=IEP] [GO:0009785 "blue light signaling pathway"
evidence=TAS] [GO:0003712 "transcription cofactor activity"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009738
"abscisic acid mediated signaling pathway" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003712
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC064879
GO:GO:0009642 GO:GO:0009785 EMBL:AF288287 EMBL:AF324245
EMBL:AF323182 EMBL:AK117248 IPI:IPI00545685 PIR:G86153
RefSeq:NP_563650.1 UniGene:At.24795 ProteinModelPortal:Q9FE22
SMR:Q9FE22 IntAct:Q9FE22 STRING:Q9FE22 PRIDE:Q9FE22
EnsemblPlants:AT1G02340.1 GeneID:839300 KEGG:ath:AT1G02340
TAIR:At1g02340 eggNOG:NOG274868 HOGENOM:HOG000112891 OMA:FSSHAMR
PhylomeDB:Q9FE22 ProtClustDB:CLSN2916946 Genevestigator:Q9FE22
GermOnline:AT1G02340 Uniprot:Q9FE22
Length = 292
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 35/99 (35%), Positives = 53/99 (53%)
Query: 78 ESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLV 137
E+ KKR+ + + SE + V R+G R R EK+S +M+ LQ LV
Sbjct: 110 ENPKKRRIQVLSSDDESEEFTREVPSV-TRKGSK-------RRRRDEKMSNKMRKLQQLV 161
Query: 138 PGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNP 176
P C+K T K +LD+ I Y+++LQ Q++ +S VNP
Sbjct: 162 PNCHK-TDKVSVLDKTIEYMKNLQLQLQMMST--VGVNP 197
Score = 110 (43.8 bits), Expect = 0.00096, P = 0.00096
Identities = 43/139 (30%), Positives = 69/139 (49%)
Query: 120 RVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLD 179
R R EK+S +M+ LQ LVP C+K T K +LD+ I Y+++LQ Q++ +S VNP
Sbjct: 144 RRRDEKMSNKMRKLQQLVPNCHK-TDKVSVLDKTIEYMKNLQLQLQMMST--VGVNPYF- 199
Query: 180 FNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQAVSCS---GLDLGIIN 236
L A F + ++ T S+ +PA H S A++ ++ +
Sbjct: 200 -----LPATLGFGM-HNHMLTAMASAHGLNPAN--HMMPSPLIPALNWPLPPFTNISFPH 251
Query: 237 PSEMGLRRTISAPVSAPET 255
S L T S+P S+P++
Sbjct: 252 SSSQSLFLTTSSPASSPQS 270
>TAIR|locus:2156015 [details] [associations]
symbol:RSL1 "AT5G37800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006063 ProtClustDB:CLSN2681768 EMBL:AB016873
IPI:IPI00523734 RefSeq:NP_198596.1 UniGene:At.55195
ProteinModelPortal:Q9FJ00 SMR:Q9FJ00 EnsemblPlants:AT5G37800.1
GeneID:833758 KEGG:ath:AT5G37800 TAIR:At5g37800 eggNOG:NOG303056
InParanoid:Q9FJ00 OMA:MDFNASS PhylomeDB:Q9FJ00
Genevestigator:Q9FJ00 Uniprot:Q9FJ00
Length = 307
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 113 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
D SLA + RRE+ISER+K LQ+LVP K+ ML++ I YV+ LQ QV+ L+
Sbjct: 210 DPQSLAAKNRRERISERLKVLQELVPNGTKVD-LVTMLEKAIGYVKFLQVQVKVLA 264
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 24/56 (42%), Positives = 39/56 (69%)
Query: 112 TDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
T +H++ E+ RREK++ER L+ ++P NKI K +LD+ I Y+Q L+R+V+ L
Sbjct: 439 TGNHAVLEKKRREKLNERFMTLRKIIPSINKID-KVSILDDTIEYLQELERRVQEL 493
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 117 (46.2 bits), Expect = 0.00016, P = 0.00016
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 113 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
D SLA + RRE+ISER++ LQ+LVP K+ ML++ I+YV+ LQ QV+ L+
Sbjct: 206 DPQSLAAKNRRERISERLRILQELVPNGTKVD-LVTMLEKAISYVKFLQLQVKVLA 260
>ZFIN|ZDB-GENE-041210-21 [details] [associations]
symbol:tfec "transcription factor EC" species:7955
"Danio rerio" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 InterPro:IPR021802
InterPro:IPR024097 InterPro:IPR024101 Pfam:PF00010 Pfam:PF11851
PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-041210-21 GO:GO:0006355
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
HOGENOM:HOG000231368 HOVERGEN:HBG006768 CTD:22797 eggNOG:NOG323513
KO:K15591 OrthoDB:EOG4PC9SS PANTHER:PTHR10014:SF13 EMBL:BC116471
IPI:IPI00500966 RefSeq:NP_001025276.2 UniGene:Dr.48383
GeneID:556894 KEGG:dre:556894 NextBio:20881715 Uniprot:Q1JQ62
Length = 396
Score = 119 (46.9 bits), Expect = 0.00016, P = 0.00016
Identities = 52/194 (26%), Positives = 80/194 (41%)
Query: 97 QKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIT---GKAGMLDEI 153
Q+HD V A+ Q D+H+L ER RR I+ R+K L L+P N K +L
Sbjct: 151 QEHD-TRVLAKERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKAS 209
Query: 154 INYVQSLQ------RQVEFLSMKLAAVNPRLDFNVDNLFAK---EAFPVCPSNFPTIGMS 204
+ Y++ LQ R +E KL N RL + L + P ++ T+ +S
Sbjct: 210 VEYIKWLQKEQQHARDLESRQKKLEQANRRLQLRIQELEIQAHAHGLPSMTASMGTVELS 269
Query: 205 SEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPH 264
S + + Q + Q A + I P E G +S+P T + S
Sbjct: 270 SHLLKQQHHQTQATAASQSAQAPQSTQPPIY-PQE-G----VSSPEYTQRTSLPSIVGEQ 323
Query: 265 LQPSSNWDSDLQNF 278
S+N+ L +F
Sbjct: 324 SDGSNNFSDPLSHF 337
>UNIPROTKB|Q657D1 [details] [associations]
symbol:P0697C12.40 "BHLH transcription-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003141
EMBL:AP003296 Uniprot:Q657D1
Length = 484
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 27/57 (47%), Positives = 39/57 (68%)
Query: 111 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
++D ++A R RRE+ISER++ LQ LVPG K+ A MLDE NY++ L+ Q+ L
Sbjct: 371 SSDPQTVAARQRRERISERLRVLQKLVPGGAKMD-TASMLDEAANYLRFLKSQIREL 426
>TAIR|locus:2179122 [details] [associations]
symbol:APTX "APRATAXIN-like" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006790 "sulfur compound metabolic
process" evidence=IDA] [GO:0009150 "purine ribonucleotide metabolic
process" evidence=IDA] [GO:0047627 "adenylylsulfatase activity"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0006310 "DNA
recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR011146
InterPro:IPR011598 InterPro:IPR015880 Pfam:PF00010 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS50888 PROSITE:PS51084 SMART:SM00353
SMART:SM00355 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 Gene3D:3.30.428.10 InterPro:IPR001310
SUPFAM:SSF54197 PROSITE:PS00892 InterPro:IPR019808 eggNOG:NOG278510
KO:K10863 PANTHER:PTHR12486 GO:GO:0006790 EMBL:AL161746
IPI:IPI00539681 PIR:T48153 RefSeq:NP_195751.1 UniGene:At.54671
ProteinModelPortal:Q9M041 SMR:Q9M041 PRIDE:Q9M041
EnsemblPlants:AT5G01310.1 GeneID:830940 KEGG:ath:AT5G01310
GeneFarm:3073 TAIR:At5g01310 HOGENOM:HOG000083464 InParanoid:Q9M041
OMA:GHEGNLQ PhylomeDB:Q9M041 ProtClustDB:CLSN2687115
BioCyc:ARA:AT5G01310-MONOMER Genevestigator:Q9M041 GO:GO:0047627
GO:GO:0009150 InterPro:IPR002589 Pfam:PF01661 PROSITE:PS51154
Uniprot:Q9M041
Length = 912
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 37/108 (34%), Positives = 55/108 (50%)
Query: 68 NEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKIS 127
N + + SF + K++ NTK S R+ +TD S+A R RR +IS
Sbjct: 12 NSSSTTSSSSSSFHRHKSE-TGNTKRS----------RSTSTLSTDPQSVAARDRRHRIS 60
Query: 128 ERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVN 175
+R K LQ +VPG K+ MLDE I+YV+ L+ Q+ + L +N
Sbjct: 61 DRFKILQSMVPGGAKMD-TVSMLDEAISYVKFLKAQIWYHQNMLLFIN 107
>UNIPROTKB|Q5MP56 [details] [associations]
symbol:BA1 "Uncharacterized protein" species:4577 "Zea
mays" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY683001 EMBL:AY683002
EMBL:BT062649 RefSeq:NP_001105271.1 UniGene:Zm.18382 IntAct:Q5MP56
GeneID:542186 KEGG:zma:542186 HOGENOM:HOG000238432 OMA:MLEQAIH
Uniprot:Q5MP56
Length = 219
Score = 113 (44.8 bits), Expect = 0.00020, P = 0.00020
Identities = 42/129 (32%), Positives = 65/129 (50%)
Query: 105 RARRGQ--ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
R R G +TD S+A R RR +IS+R + L+ LVPG +K+ ML++ I+YV+ L+
Sbjct: 45 RRRPGAKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMD-TVSMLEQAIHYVKFLKT 103
Query: 163 QVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQ 222
Q+ S+ AA+ + L A A V N T+ S T + Q +
Sbjct: 104 QI---SLHQAALMQHEEGCHAELAAYSAVAVVGDNEVTLA-SHGRTGACDEMMQLQVAAE 159
Query: 223 QAVSCSGLD 231
+A+S G+D
Sbjct: 160 EALSY-GVD 167
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 116 (45.9 bits), Expect = 0.00024, P = 0.00024
Identities = 39/143 (27%), Positives = 71/143 (49%)
Query: 41 ISRTSSSPPAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHD 100
++ TSSSP + +S + + K + +F + + + K +K D
Sbjct: 62 MNSTSSSPSSSSSSGSRTSQVISFGSPDTKTNPVETSLNFSNQVS---MDQKVGSKRK-D 117
Query: 101 YIHVRARRG-QATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
++ RR H LAER RR+K++ER+ L L+PG K T KA +L++ I +++
Sbjct: 118 CVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKK-TDKATVLEDAIKHLKQ 176
Query: 160 LQRQVEFLSMKLAAVNPRLDFNV 182
LQ +V+ L + V ++D ++
Sbjct: 177 LQERVKKLEEE-RVVTKKMDQSI 198
>TAIR|locus:2126856 [details] [associations]
symbol:IND "AT4G00120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010197 "polar nucleus fusion" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161471
GO:GO:0010197 EMBL:AF069299 EMBL:BT029443 EMBL:AF488578
IPI:IPI00532644 PIR:T01340 RefSeq:NP_191923.1 UniGene:At.34598
ProteinModelPortal:O81313 SMR:O81313 IntAct:O81313 STRING:O81313
PRIDE:O81313 EnsemblPlants:AT4G00120.1 GeneID:827911
KEGG:ath:AT4G00120 TAIR:At4g00120 eggNOG:NOG274244
HOGENOM:HOG000113070 InParanoid:O81313 OMA:DWNKAND PhylomeDB:O81313
ProtClustDB:CLSN2916160 Genevestigator:O81313 Uniprot:O81313
Length = 198
Score = 110 (43.8 bits), Expect = 0.00032, P = 0.00032
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 113 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
D ++ R RRE+ISE+++ L+ +VPG K+ A MLDE I Y + L+RQV L
Sbjct: 121 DPQTVVARRRRERISEKIRILKRIVPGGAKMD-TASMLDEAIRYTKFLKRQVRIL 174
>TAIR|locus:2098008 [details] [associations]
symbol:PIL2 "phytochrome interacting factor 3-like 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010017 "red or far-red light signaling
pathway" evidence=IEP] [GO:0010089 "xylem development"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 GO:GO:0010017
EMBL:AL138651 EMBL:AB090874 EMBL:BT033108 IPI:IPI00525935
IPI:IPI00846835 PIR:T48001 RefSeq:NP_001078329.1 RefSeq:NP_191768.2
UniGene:At.1005 UniGene:At.50304 ProteinModelPortal:Q8L5W7
SMR:Q8L5W7 IntAct:Q8L5W7 STRING:Q8L5W7 EnsemblPlants:AT3G62090.2
GeneID:825382 KEGG:ath:AT3G62090 TAIR:At3g62090 eggNOG:NOG305930
HOGENOM:HOG000115543 InParanoid:Q8L5W7 OMA:ETNMLES PhylomeDB:Q8L5W7
ProtClustDB:CLSN2680935 Genevestigator:Q8L5W7 Uniprot:Q8L5W7
Length = 363
Score = 115 (45.5 bits), Expect = 0.00039, P = 0.00039
Identities = 25/72 (34%), Positives = 47/72 (65%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
+R + ++++ ER +R I+++M+ LQ+L+P +K ++ MLDE INY+ +LQ QV+
Sbjct: 185 KRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNES-MLDEAINYMTNLQLQVQM 243
Query: 167 LSMKLAAVNPRL 178
++M V P +
Sbjct: 244 MTMGNRFVTPSM 255
>TAIR|locus:2199307 [details] [associations]
symbol:AT1G68240 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009686 "gibberellin biosynthetic process" evidence=RCA]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC016447
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AJ577585 EMBL:AY735551
EMBL:AY735552 EMBL:AY924719 IPI:IPI00528459 IPI:IPI00657054
IPI:IPI00919318 PIR:H96705 RefSeq:NP_001031251.1 RefSeq:NP_176991.2
UniGene:At.35550 ProteinModelPortal:Q5XVH0 SMR:Q5XVH0
EnsemblPlants:AT1G68240.1 GeneID:843153 KEGG:ath:AT1G68240
TAIR:At1g68240 eggNOG:NOG270610 HOGENOM:HOG000095221 OMA:EGTHEEE
PhylomeDB:Q5XVH0 ProtClustDB:CLSN2681409 Genevestigator:Q5XVH0
Uniprot:Q5XVH0
Length = 185
Score = 108 (43.1 bits), Expect = 0.00043, P = 0.00043
Identities = 28/85 (32%), Positives = 50/85 (58%)
Query: 91 TKASEVQKHDY-----IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPG-CNKIT 144
TK ++ +KHD + A+R ++ + + E+ RR++I +++ LQ L+P C K
Sbjct: 43 TKNNDHEKHDEEPDEESYRMAKRQRSMEYRMMMEKKRRKEIKDKVDILQGLMPNHCTK-P 101
Query: 145 GKAGMLDEIINYVQSLQRQVEFLSM 169
A L+ II Y++SL+ QV+ +SM
Sbjct: 102 DLASKLENIIEYIKSLKYQVDVMSM 126
>UNIPROTKB|Q2QML8 [details] [associations]
symbol:LOC_Os12g40730 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 KEGG:dosa:Os12t0599400-00
KEGG:dosa:Os12t0599550-00 Gramene:Q2QML8 HOGENOM:HOG000244163
Uniprot:Q2QML8
Length = 387
Score = 115 (45.5 bits), Expect = 0.00044, P = 0.00044
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 122 RREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
RR KI+ER + LQ LVPGC+K + +A LD+ I Y++SLQ Q++ +S+
Sbjct: 226 RRFKITERFRTLQRLVPGCDK-SNQASTLDQTIQYMKSLQHQLKAMSV 272
>UNIPROTKB|Q2QMM8 [details] [associations]
symbol:LOC_Os12g40630 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 Gramene:Q2QMM8
eggNOG:NOG272270 Uniprot:Q2QMM8
Length = 249
Score = 110 (43.8 bits), Expect = 0.00067, P = 0.00067
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 112 TDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
TD RR KI+E +K LQ LVP C+K +A LD+ I Y++SLQ+ + +S+
Sbjct: 98 TDEGICVMEKRRCKINENLKTLQQLVPVCDKSNNQASTLDKTIRYMKSLQQHAQAMSV 155
>RGD|3092 [details] [associations]
symbol:Mitf "microphthalmia-associated transcription factor"
species:10116 "Rattus norvegicus" [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISO] [GO:0006461 "protein complex
assembly" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA;ISO] [GO:0030154 "cell differentiation" evidence=ISO]
[GO:0030316 "osteoclast differentiation" evidence=IEA;ISO]
[GO:0030318 "melanocyte differentiation" evidence=IEA;ISO]
[GO:0042127 "regulation of cell proliferation" evidence=IEA;ISO]
[GO:0042981 "regulation of apoptotic process" evidence=ISO]
[GO:0043010 "camera-type eye development" evidence=IEA;ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA;ISO] [GO:0043234 "protein complex" evidence=IEA;ISO]
[GO:0043473 "pigmentation" evidence=ISO] [GO:0045165 "cell fate
commitment" evidence=IEA;ISO] [GO:0045670 "regulation of osteoclast
differentiation" evidence=IEA;ISO] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046849 "bone remodeling" evidence=IEA;ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 InterPro:IPR024097 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:3092 GO:GO:0005634 GO:GO:0043066 GO:GO:0043234
GO:GO:0006461 GO:GO:0016055 GO:GO:0003677 GO:GO:0046849 GO:GO:0003682
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0043010 GO:GO:0045670
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014 GO:GO:0030318
GO:GO:0045165 GO:GO:0030316 eggNOG:NOG251286 HOGENOM:HOG000231368
OrthoDB:EOG495ZRR EMBL:AF029886 IPI:IPI00563001 UniGene:Rn.31427
ProteinModelPortal:O88368 STRING:O88368 UCSC:RGD:3092
InParanoid:O88368 ArrayExpress:O88368 Genevestigator:O88368
GermOnline:ENSRNOG00000008658 Uniprot:O88368
Length = 110
Score = 91 (37.1 bits), Expect = 0.00083, P = 0.00083
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIT---GKAGMLDEIINYVQSLQR 162
A+ Q D+H+L ER RR I++R+K L L+P N K +L ++Y++ LQR
Sbjct: 16 AKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQR 75
Query: 163 Q 163
+
Sbjct: 76 E 76
>UNIPROTKB|O88368 [details] [associations]
symbol:Mitf "Microphthalmia-associated transcription
factor" species:10116 "Rattus norvegicus" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
InterPro:IPR024097 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
RGD:3092 GO:GO:0005634 GO:GO:0043066 GO:GO:0043234 GO:GO:0006461
GO:GO:0016055 GO:GO:0003677 GO:GO:0046849 GO:GO:0003682
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0043010
GO:GO:0045670 Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
GO:GO:0030318 GO:GO:0045165 GO:GO:0030316 eggNOG:NOG251286
HOGENOM:HOG000231368 OrthoDB:EOG495ZRR EMBL:AF029886
IPI:IPI00563001 UniGene:Rn.31427 ProteinModelPortal:O88368
STRING:O88368 UCSC:RGD:3092 InParanoid:O88368 ArrayExpress:O88368
Genevestigator:O88368 GermOnline:ENSRNOG00000008658 Uniprot:O88368
Length = 110
Score = 91 (37.1 bits), Expect = 0.00083, P = 0.00083
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIT---GKAGMLDEIINYVQSLQR 162
A+ Q D+H+L ER RR I++R+K L L+P N K +L ++Y++ LQR
Sbjct: 16 AKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQR 75
Query: 163 Q 163
+
Sbjct: 76 E 76
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 112 (44.5 bits), Expect = 0.00088, P = 0.00088
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 111 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
A+ SHS AER RRE+I+ + L+ ++P K T KA +L E+I +V+ L+R+ +S
Sbjct: 174 ASKSHSEAERRRRERINNHLAKLRSILPNTTK-TDKASLLAEVIQHVKELKRETSVIS 230
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.129 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 302 288 0.00087 115 3 11 22 0.40 34
33 0.43 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 106
No. of states in DFA: 604 (64 KB)
Total size of DFA: 192 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.91u 0.07s 24.98t Elapsed: 00:00:01
Total cpu time: 24.92u 0.07s 24.99t Elapsed: 00:00:01
Start: Sat May 11 06:26:03 2013 End: Sat May 11 06:26:04 2013
WARNINGS ISSUED: 1