BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022116
(302 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 347 bits (890), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 199/374 (53%), Positives = 236/374 (63%), Gaps = 78/374 (20%)
Query: 1 MMGQQVKPDPAFENGWPDLGKIVAPAAGY-----GF-------GPGFEASYAISRTSSSP 48
++G+ VK DP EN WP+ GK+ P G+ GF GFE ++ SRTSS P
Sbjct: 89 LLGRAVKADPGLENVWPEFGKLTMPGTGFNVENAGFESAGILNCSGFEMNHTTSRTSSCP 148
Query: 49 PA---------VVPEAV-DVKGKVSVAALN-EKVSA--AVGRESFKKRKAD--------- 86
A V+PE + G+ S +KV + V E K ++
Sbjct: 149 LAAAEAKVRESVLPEKIASAVGRESFKKRKADKVQSPKVVAEEETKDKRIKGCAEDGESK 208
Query: 87 ------------------------------KVQNTKASEVQKHDYIHVRARRGQATDSHS 116
+K SEVQK DYIHVRARRGQATDSHS
Sbjct: 209 ITEANNNKNSTTTTTTTATTTTTNNNNRETSADTSKVSEVQKPDYIHVRARRGQATDSHS 268
Query: 117 LAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNP 176
LAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNP
Sbjct: 269 LAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNP 328
Query: 177 RLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIIN 236
RLDFN+DN AKE FP C +NFPTIGMSSEMT+P +YLH ++ +QQ V+ G+++G IN
Sbjct: 329 RLDFNIDNFLAKEVFPACAANFPTIGMSSEMTNP-SYLH-YDPIQQ--VATCGVEMG-IN 383
Query: 237 PSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQNFYN-------VASFPSQ-Q 288
P+E+ LRRTISAPVS P+TF+D SC+ +QPSS WD+DLQN Y + SFPSQ
Sbjct: 384 PAEIALRRTISAPVSIPDTFLD-SCFTQIQPSSTWDADLQNLYGPEFHQGRLMSFPSQAA 442
Query: 289 FTGTLEASNLKMEM 302
FTG ++ASNLKMEM
Sbjct: 443 FTGPIDASNLKMEM 456
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 206/372 (55%), Positives = 236/372 (63%), Gaps = 80/372 (21%)
Query: 4 QQVKPDPAF-ENG-WPDLGKIVAPAAGYGFGP-GF-EASYAISRTSSSPP---------- 49
+ VKPDP F +NG W + + G+GP GF ++AISRTSS PP
Sbjct: 80 RSVKPDPGFLDNGCWSN----TSSTDLVGYGPCGFGNMNFAISRTSSCPPTVADAGPVLV 135
Query: 50 ----AVVPEAVDV--------KGKVSVAALNEKVSAAVGRESFKKRKA------------ 85
+VV E + K KV N KV A K+ K
Sbjct: 136 KGRESVVSEKLTCGVGSESTKKRKVDKVQNNTKVVAEDDNCRDKRIKVCAEEGESKMITE 195
Query: 86 --------------------DKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREK 125
N+K +EVQK DYIHVRARRGQATDSHSLAERVRREK
Sbjct: 196 KNNNNKSSSSKNSNKENSAETSKDNSKVTEVQKPDYIHVRARRGQATDSHSLAERVRREK 255
Query: 126 ISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNL 185
ISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN+DNL
Sbjct: 256 ISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNL 315
Query: 186 FAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQA--------VSCSGLDLGIINP 237
AKE FP CP+NFP IG+SS+MT+P AYL QFN +QQQ V+C GLD+GI NP
Sbjct: 316 IAKETFPPCPTNFPAIGLSSDMTNP-AYL-QFNPVQQQQQQQQQQQLVTCCGLDMGINNP 373
Query: 238 SEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQNFYNVA-------SFPSQQFT 290
+MG+RRTISAPVS PE++IDSSC+ +Q SS WD+DLQN YNVA SFP+Q FT
Sbjct: 374 -DMGIRRTISAPVSIPESYIDSSCFNQIQSSSTWDADLQNLYNVAFDQGRSTSFPTQPFT 432
Query: 291 GTLEASNLKMEM 302
G ++A NLKMEM
Sbjct: 433 GAIDAGNLKMEM 444
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 343 bits (880), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 169/220 (76%), Positives = 186/220 (84%), Gaps = 10/220 (4%)
Query: 90 NTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 149
N+K +EVQK DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM
Sbjct: 223 NSKVTEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 282
Query: 150 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTH 209
LDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN DNLFA+EAFP C NFPTIGMSS+MT+
Sbjct: 283 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNFDNLFAREAFPACSVNFPTIGMSSDMTN 342
Query: 210 PAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSS 269
P AYL QFN QQQ V+C GLD+G +P +MGL+RT S+P S PETF+DSSC+ P
Sbjct: 343 P-AYL-QFNPAQQQLVTCCGLDMG-TDPPDMGLKRTTSSPESIPETFLDSSCFTQAHPPP 399
Query: 270 NWDSDLQNFYNVA-------SFPSQQFTGTLEASNLKMEM 302
WD+DLQN YNVA SFP+Q FTG++EASNLKMEM
Sbjct: 400 AWDADLQNLYNVAFDQGRQTSFPTQPFTGSIEASNLKMEM 439
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 164/221 (74%), Positives = 186/221 (84%), Gaps = 14/221 (6%)
Query: 90 NTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 149
+K SEVQK DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM
Sbjct: 131 TSKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 190
Query: 150 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTH 209
LDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN+DN AKE FP C +NFPTIGMSSEMT+
Sbjct: 191 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNFLAKEVFPACAANFPTIGMSSEMTN 250
Query: 210 PAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSS 269
P +YLH ++ +QQ V+ G+++G INP+E+ LRRTISAPVS P+TF+D SC+ +QPSS
Sbjct: 251 P-SYLH-YDPIQQ--VATCGVEMG-INPAEIALRRTISAPVSIPDTFLD-SCFTQIQPSS 304
Query: 270 NWDSDLQNFYN-------VASFPSQ-QFTGTLEASNLKMEM 302
WD+DLQN Y + SFPSQ FTG ++ASNLKMEM
Sbjct: 305 TWDADLQNLYGPEFHQGRLMSFPSQAAFTGPIDASNLKMEM 345
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/225 (72%), Positives = 181/225 (80%), Gaps = 13/225 (5%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
+N+KASEVQK DYIHVRARRGQATDSHSLAER RREKISERMKYLQDLVPGCNKITGKAG
Sbjct: 234 ENSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAG 293
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFP--VCPSNFPTI-GMSS 205
MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVD+LF KE FP +NFP++ GMSS
Sbjct: 294 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDDLFNKEVFPPSCTAANFPSVGGMSS 353
Query: 206 EMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHL 265
EMT P++YL QFN QQ SC GL++G IN S + LRRTISAPVS PE F+DSSC
Sbjct: 354 EMTDPSSYL-QFNPNNQQMDSCCGLEMG-INTSHVALRRTISAPVSFPENFLDSSCLTQF 411
Query: 266 QPSSNWDSDLQNFYNVA--------SFPSQQFTGTLEASNLKMEM 302
QPSS WD DLQN YNV +F S +TG++EA N+KMEM
Sbjct: 412 QPSSGWDVDLQNMYNVGFDQGRSSNAFSSHPYTGSIEAGNIKMEM 456
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 24/89 (26%)
Query: 6 VKPDPAFENGWPDLGK-----IVAPAAGYGFGPGFEASYAISRTSSSPPAVVPEAVDVKG 60
VKPDP E+GW ++GK ++ P A E + ++SRTSS P V P
Sbjct: 97 VKPDPGLEDGWSEMGKFDPSLLLNPTA-------CELNSSLSRTSSCLPVVAP------- 142
Query: 61 KVSVAALNEKVSAAVGRESFKKRKADKVQ 89
+ EK+ + GRESFKKRKA+K
Sbjct: 143 -----TVAEKMGSMAGRESFKKRKAEKAH 166
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 182/333 (54%), Positives = 209/333 (62%), Gaps = 81/333 (24%)
Query: 32 GPGFEA-SYAISRTSSSPPAVV-PEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADK-- 87
PG A S +ISRT S PPA+V PE + +++G++SFKKRK DK
Sbjct: 85 APGLHANSSSISRTFSCPPALVDPEP-------------KPTDSSIGKDSFKKRKTDKPH 131
Query: 88 ------------------------------------------------VQNTKASEVQKH 99
QN+KASE K
Sbjct: 132 NPKVVAENENKDKRIKVGADDGESKITKCNTINTNTNNKETCTDTSNSKQNSKASE--KP 189
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DYIHVRARRGQATDSHSLAERVRREKISERM YLQDLVPGCNK+TGKAGMLDEIINYVQS
Sbjct: 190 DYIHVRARRGQATDSHSLAERVRREKISERMNYLQDLVPGCNKVTGKAGMLDEIINYVQS 249
Query: 160 LQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGM---SSEMTHPAAYLHQ 216
LQRQVEFLSMKLAAVNPRLDF++D+LF K+ FP C +NFP IGM SS++T+P AYL
Sbjct: 250 LQRQVEFLSMKLAAVNPRLDFSMDDLFDKDVFPTCAANFPNIGMSSTSSDITNP-AYL-P 307
Query: 217 FNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQ 276
FNS QQ GLD G INPS++GLRRTISAPVS PET++ SSC+ + PSS W+ D Q
Sbjct: 308 FNS-PQQIFQYDGLDTG-INPSDVGLRRTISAPVSMPETYLQSSCFTQMLPSSTWEGDFQ 365
Query: 277 NFYN-------VASFPSQQFTGTLEASNLKMEM 302
N N SFPSQ +G +EA NLKMEM
Sbjct: 366 NLCNFDVDQARATSFPSQLLSGLVEAGNLKMEM 398
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 177/304 (58%), Positives = 210/304 (69%), Gaps = 29/304 (9%)
Query: 19 LGKIVAPAAGYGFGPGFEASYAISRTSSSPPAVVPEAVDVKGKVSVAALNEKVSAAV-GR 77
LG++VA + G GFE + + V ++ D + KVSV K++ + G
Sbjct: 50 LGEVVANSMKPG-DLGFENVEETVKKRKADHKVDMKSKDKRIKVSVEEGESKITEQIKGN 108
Query: 78 ESFK---KRKADKV---QNTKASEVQKH--DYIHVRARRGQATDSHSLAERVRREKISER 129
++ K + D V +N+K SE+Q H DYIHVRARRGQATDSHSLAERVRREKISER
Sbjct: 109 KNTKLKNRENCDDVGSKENSKGSEIQNHKPDYIHVRARRGQATDSHSLAERVRREKISER 168
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
MKYLQDLVPGCNKI GKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN+D LFAKE
Sbjct: 169 MKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFAKE 228
Query: 190 AFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQAVSCSGL--DLGIINPSEMGLRRTIS 247
F NF M SEM++P AYL QFNS QQQ C GL ++GI+ P E+G+RR I+
Sbjct: 229 VF---TQNFQM--MQSEMSNP-AYL-QFNSAQQQVSCCGGLINNMGIL-PPEIGVRRNIN 280
Query: 248 APVSA--PETFIDSSCYPHLQPSSNWDSDLQNFYNV-------ASFPSQQFTGTLEASNL 298
AP SA PE F+D SC+ H+ PSS W+ D QN ++V SFPSQ FTG +EASNL
Sbjct: 281 APASASLPEIFLDPSCFTHILPSSTWEGDFQNLHSVDFDQGRSTSFPSQPFTGMIEASNL 340
Query: 299 KMEM 302
KMEM
Sbjct: 341 KMEM 344
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 157/225 (69%), Positives = 178/225 (79%), Gaps = 14/225 (6%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
+N+K S+VQK DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG
Sbjct: 176 ENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 235
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSN--FPTIGMSSE 206
MLDEIINYVQSLQ+QVEFLSMKLA VNPRLDFN+D+LF KE FP C +N F +GMS+
Sbjct: 236 MLDEIINYVQSLQKQVEFLSMKLATVNPRLDFNIDDLFEKEVFPNCDANASFQAMGMSTG 295
Query: 207 MTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQ 266
+ YL QFNS QQ V GLD G +NPS+MGLRR+ISAPVS P+TFIDSSC+ +
Sbjct: 296 LNSNNPYL-QFNS-PQQFVPYGGLDAG-MNPSDMGLRRSISAPVSIPQTFIDSSCFSQIL 352
Query: 267 PSSNWDSDLQNFYN-------VASFP--SQQFTGTLEASNLKMEM 302
PS+ W+ D QN YN SFP SQ FTG +EA+NLK+EM
Sbjct: 353 PSTIWEGDFQNLYNFNFDQARATSFPTQSQLFTGLVEANNLKIEM 397
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 157/215 (73%), Positives = 172/215 (80%), Gaps = 13/215 (6%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
+N+KASEVQK DYIHVRARRGQATDSHSLAER RREKISERMKYLQDLVPGCNKITGKAG
Sbjct: 234 ENSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAG 293
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFP--VCPSNFPTI-GMSS 205
MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVD+LF KE FP +NFP++ GMSS
Sbjct: 294 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDDLFNKEVFPPSCTAANFPSVGGMSS 353
Query: 206 EMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHL 265
EMT P++YL QFN QQ SC GL++G IN S + LRRTISAPVS PE F+DSSC
Sbjct: 354 EMTDPSSYL-QFNPNNQQMDSCCGLEMG-INTSHVALRRTISAPVSFPENFLDSSCLTQF 411
Query: 266 QPSSNWDSDLQNFYNVA--------SFPSQQFTGT 292
QPSS WD DLQN YNV +F S +TG+
Sbjct: 412 QPSSGWDVDLQNMYNVGFDQGRSSNAFSSHPYTGS 446
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 24/94 (25%)
Query: 1 MMGQQVKPDPAFENGWPDLGK-----IVAPAAGYGFGPGFEASYAISRTSSSPPAVVPEA 55
M+ VKPDP E+GW ++GK ++ P A E + ++SRTSS P V P
Sbjct: 92 MVMGAVKPDPGLEDGWSEMGKFDPSLLLNPTA-------CELNSSLSRTSSCLPVVAP-- 142
Query: 56 VDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQ 89
+ EK+ + GRESFKKRKA+K
Sbjct: 143 ----------TVAEKMGSMAGRESFKKRKAEKAH 166
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 175/321 (54%), Positives = 203/321 (63%), Gaps = 72/321 (22%)
Query: 38 SYAISRTSSSPPAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADK---------- 87
S +ISRT S PPA+V + K K + ++VG++ FKKRK DK
Sbjct: 80 SSSISRTFSCPPALVEPESESKPKP------KPTDSSVGKDGFKKRKPDKPHHPKVVAEN 133
Query: 88 -------------------------------------VQNTKASEVQKHDYIHVRARRGQ 110
N+KASE K DYIHVRARRGQ
Sbjct: 134 DNKDKRIKFGSDDGESKITKSNTTNTNTNNNKETCAETSNSKASE--KPDYIHVRARRGQ 191
Query: 111 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMK 170
ATDSHSLAERVRREKISERMKYLQDLVPGCNK+TGKAGMLDEIINYVQSLQRQVEFLSMK
Sbjct: 192 ATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFLSMK 251
Query: 171 LAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMS--SEMTHPAAYLHQFNSLQQQAVSCS 228
LAAVNPRLD ++D+LF K+ F C +NFP IG+S S++++P AYL QFNS QQ S
Sbjct: 252 LAAVNPRLDLSIDDLFDKDVFSTCATNFPNIGISSTSDISNP-AYL-QFNS-PQQIFSYD 308
Query: 229 GLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQNFYN-------V 281
GLD PS+MGLRRTISAPVS PET++ SSC+ + PSS W+ D QN N
Sbjct: 309 GLD-----PSDMGLRRTISAPVSMPETYLQSSCFTQMLPSSTWEGDFQNLCNFDFDQARA 363
Query: 282 ASFPSQQFTGTLEASNLKMEM 302
SFPSQ +G +EA NLKMEM
Sbjct: 364 TSFPSQLLSGLVEAGNLKMEM 384
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 301 bits (770), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 157/226 (69%), Positives = 178/226 (78%), Gaps = 15/226 (6%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
+N+K S+VQK DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG
Sbjct: 176 ENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 235
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSN--FPTIGMSSE 206
MLDEIINYVQSLQ+QVEFLSMKLA VNPRLDFN+D+LF KE FP C +N F +GMS+
Sbjct: 236 MLDEIINYVQSLQKQVEFLSMKLATVNPRLDFNIDDLFEKEVFPNCDANASFQAMGMSTG 295
Query: 207 MTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYP-HL 265
+ YL QFNS QQ V GLD G +NPS+MGLRR+ISAPVS P+TFIDSSC+ +
Sbjct: 296 LNSNNPYL-QFNS-PQQFVPYGGLDAG-MNPSDMGLRRSISAPVSIPQTFIDSSCFSQQI 352
Query: 266 QPSSNWDSDLQNFYN-------VASFP--SQQFTGTLEASNLKMEM 302
PS+ W+ D QN YN SFP SQ FTG +EA+NLK+EM
Sbjct: 353 LPSTIWEGDFQNLYNFNFDQARATSFPTQSQLFTGLVEANNLKIEM 398
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 183/355 (51%), Positives = 215/355 (60%), Gaps = 66/355 (18%)
Query: 1 MMGQQVKPDPAFENGWPDLGKIVAPAAGYGFGPGFEASYAISRTSS------SPPAVVPE 54
++ VKPDP WP+ AG+G GF + IS T S SP +
Sbjct: 79 VLTHSVKPDPGV---WPEFD------AGFGSSSGFLPT--ISPTCSRGGDLVSPKENMAS 127
Query: 55 A-------------------------VDVKGKVSVAALNEKVSAAVGRESFKKRKADKV- 88
A V G+ + + E+ S G+ + K +
Sbjct: 128 AKENTKKRKPQNSKVVAASDNKQDKRVKASGEEGESKVTEQTSNKNGKSNANKNNNRETT 187
Query: 89 ------QNTKASEVQ--KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
N+K SEVQ K +YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC
Sbjct: 188 SAETSKDNSKGSEVQNQKPEYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 247
Query: 141 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPT 200
NK+ GKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN+D LF KE FP C +FP
Sbjct: 248 NKVAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNLDELFTKEVFPSCAQSFPN 307
Query: 201 IGMSSE--MTHPAAYLHQFNSLQQQAVSCSGL--DLGIINPSEMGLRRTIS-APVSAPET 255
IGM + M++ +YL FNS QQ C GL ++G I+P MGLRR IS +PV PET
Sbjct: 308 IGMPLDMSMSNNPSYL-PFNSAQQLVSCCGGLINNMG-ISPPNMGLRRNISTSPVPLPET 365
Query: 256 FIDSSCYPHLQPSSNWD-SDLQNFYNV-------ASFPSQQFTGTLEASNLKMEM 302
F+DSSC+ + PSSNW+ D Q+ YNV ASFPSQ FTG +EASNLKMEM
Sbjct: 366 FLDSSCFTQILPSSNWEGGDFQSLYNVAFDQGRTASFPSQPFTGLVEASNLKMEM 420
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 181/353 (51%), Positives = 210/353 (59%), Gaps = 72/353 (20%)
Query: 1 MMGQQVKPDPAFENGWPDLGKIVAPAAGYGFGPGFEASYAISRTSSSPPAVV-PEAVDVK 59
++ VKPDP WP+ +GF P AISRT S +V P+
Sbjct: 71 VLTHSVKPDPGV---WPE----------FGFLP------AISRTCSRDGDLVSPKENMAS 111
Query: 60 GKVSVAALNEKVSAAVGRESFKKRKADKVQNT---------------------------- 91
GK + + S V K K +V+ T
Sbjct: 112 GKENAKKRKPQNSKVVAEIDNNKDKDKRVKVTGEEGESKVTEHHTRNKNAKSNANKNNRE 171
Query: 92 ------KASEVQ--KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI 143
K SEVQ K DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL+PGCNK+
Sbjct: 172 TSADTSKGSEVQNQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKV 231
Query: 144 TGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGM 203
GKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN+D LFAKE FP C +FP IG+
Sbjct: 232 AGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFAKEVFPSCAQSFPNIGI 291
Query: 204 SSEM--THPAAYLHQFNSLQQQAVSCSGL--DLGIINPSEMGLRRTI--SAPVSAPETFI 257
S+M ++ +YL QFNS QQ C GL +G I+P MGLR I ++ V PETF+
Sbjct: 292 PSDMSISNNPSYL-QFNSAQQLVSCCGGLINSMG-ISPPNMGLRTNIISTSTVPLPETFL 349
Query: 258 DSSCYPHLQPSSNWD-SDLQNFYNV-------ASFPSQQFTGTLEASNLKMEM 302
DSSC+ + PSSNW+ D Q+ YNV ASFP Q FTG +EASNLKMEM
Sbjct: 350 DSSCFAQILPSSNWEGGDFQSLYNVAFDQGRTASFPPQPFTGLVEASNLKMEM 402
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 180/353 (50%), Positives = 209/353 (59%), Gaps = 72/353 (20%)
Query: 1 MMGQQVKPDPAFENGWPDLGKIVAPAAGYGFGPGFEASYAISRTSSSPPAVV-PEAVDVK 59
++ VKPDP WP+ +GF P AISRT S +V P+
Sbjct: 71 VLTHSVKPDPGV---WPE----------FGFLP------AISRTCSRDGDLVSPKENMAS 111
Query: 60 GKVSVAALNEKVSAAVGRESFKKRKADKVQNT---------------------------- 91
GK + + S V K K +V+ T
Sbjct: 112 GKENAKKRKPQNSKVVAEIDNNKDKDKRVKVTGEEGESKVTEHHTRNKNAKSNANKNNRE 171
Query: 92 ------KASEVQ--KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI 143
K SEVQ K DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL+PGCNK+
Sbjct: 172 TSADTSKGSEVQNQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKV 231
Query: 144 TGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGM 203
GKAGMLDEIINYVQSLQRQVEFLSMKLAAVNP LDFN+D LFAKE FP C +FP IG+
Sbjct: 232 AGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPGLDFNIDELFAKEVFPSCAQSFPNIGI 291
Query: 204 SSEM--THPAAYLHQFNSLQQQAVSCSGL--DLGIINPSEMGLRRTI--SAPVSAPETFI 257
S+M ++ +YL QFNS QQ C GL +G I+P MGLR I ++ V PETF+
Sbjct: 292 PSDMSISNNPSYL-QFNSAQQLVSCCGGLINSMG-ISPPNMGLRTNIISTSTVPLPETFL 349
Query: 258 DSSCYPHLQPSSNWD-SDLQNFYNV-------ASFPSQQFTGTLEASNLKMEM 302
DSSC+ + PSSNW+ D Q+ YNV ASFP Q FTG +EASNLKMEM
Sbjct: 350 DSSCFAQILPSSNWEGGDFQSLYNVAFDQGRTASFPPQPFTGLVEASNLKMEM 402
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 165/307 (53%), Positives = 184/307 (59%), Gaps = 81/307 (26%)
Query: 19 LGKIVAPAAGYGF-----GP------GFEASYAISRTSSSPPAVVPEAVDVKGKVSVAAL 67
L ++VA A F GP G + + AISRT S PP +V A
Sbjct: 33 LAEVVAQAHSIKFHMPPAGPEPSPASGPDLNSAISRTFSCPPTLVE-----------AKA 81
Query: 68 NEKVSAAVGRESFKKRKADKVQN------------------------------------- 90
NE S + +ES+KKRK+DK N
Sbjct: 82 NEFFS--IKKESYKKRKSDKPHNPKIVAENDSKDKRIKVDSEDGESNITGKISIKDNKTA 139
Query: 91 --------------TKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 136
+K +E QK DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL
Sbjct: 140 TKSKNRGTCANSSNSKENEDQKLDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 199
Query: 137 VPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPS 196
VPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLA VNP L+FN D+LF K FP C S
Sbjct: 200 VPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLATVNPALEFNSDDLFDKVVFPSCDS 259
Query: 197 NFPTIGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGI-INPSEMGLRRTISAPVSAPET 255
FP I +T+PA YL QFNS QQ VS GLD G+ +NPS++GLRRTISAPVS PET
Sbjct: 260 TFPAIN----LTNPATYL-QFNSPPQQMVSYGGLDTGMNMNPSDVGLRRTISAPVSVPET 314
Query: 256 FIDSSCY 262
FIDSSCY
Sbjct: 315 FIDSSCY 321
>gi|224077848|ref|XP_002305434.1| predicted protein [Populus trichocarpa]
gi|222848398|gb|EEE85945.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 266 bits (681), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 133/180 (73%), Positives = 147/180 (81%), Gaps = 10/180 (5%)
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
MKYLQDLVPGCN ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN+DNLFAKE
Sbjct: 1 MKYLQDLVPGCNNITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNLFAKE 60
Query: 190 AFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAP 249
AFP C +NFP IGMS +MT+ AAYL QFN QQQ VSC GLD+G INP +MGLRRT S P
Sbjct: 61 AFPACSTNFPAIGMSPDMTN-AAYL-QFNPAQQQLVSCCGLDMG-INPPDMGLRRTTSTP 117
Query: 250 VSAPETFIDSSCYPHLQPSSNWDSDLQNFYNVA-------SFPSQQFTGTLEASNLKMEM 302
VS PETF+DSSC+ +Q WD+DL N YNVA +FP Q F+G++EASNLKMEM
Sbjct: 118 VSIPETFLDSSCFTQIQAPPTWDADLPNLYNVAFDQGRQTTFPVQPFSGSVEASNLKMEM 177
>gi|388493796|gb|AFK34964.1| unknown [Lotus japonicus]
gi|388513685|gb|AFK44904.1| unknown [Lotus japonicus]
Length = 180
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 119/182 (65%), Positives = 138/182 (75%), Gaps = 11/182 (6%)
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
MKYLQDLVPGCNKI GKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN+D LF KE
Sbjct: 1 MKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKE 60
Query: 190 AFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQAVSCSGL--DLGIINPSEMGLRRTIS 247
FP C +FP+IGM S+MT+ AYL QFNS QQ C GL + II P++MG+RR ++
Sbjct: 61 VFPACAQSFPSIGMQSDMTNHPAYL-QFNSAQQLVSYCGGLVNNTEII-PTDMGVRRNMN 118
Query: 248 APVSAPETFIDSSCYPHLQPSSNWDSDLQNFYNVA-------SFPSQQFTGTLEASNLKM 300
PVS PETF+DSSC+ + PS +W+ D QN +VA SFP Q FT +EAS+LKM
Sbjct: 119 VPVSMPETFLDSSCFTQILPSLSWEGDFQNLQSVAFDQGRSSSFPFQPFTDLVEASDLKM 178
Query: 301 EM 302
EM
Sbjct: 179 EM 180
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 149/319 (46%), Positives = 182/319 (57%), Gaps = 62/319 (19%)
Query: 6 VKPDPAFENGWPDLGKIVAPAAGYGF---GPGFE----------ASYAISRTSSSPPAVV 52
+K + +++NG P LG P AG F G GFE ++ISRTSS P +
Sbjct: 62 MKAENSWDNGLPGLGDF--PTAGTDFRGHGMGFELPEIAGSSLEMDHSISRTSSCPLPDL 119
Query: 53 PEAVDVKGKVSVAALNEKVSAAVGRESFKKRKAD-------KVQNTK------------- 92
A V G+ GR S KKRKA+ K Q K
Sbjct: 120 GAATSVDGR-----------ELAGRNSVKKRKAEVALTEECKDQKIKRDEEEEESKIEEK 168
Query: 93 -------ASEVQ---KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 142
AS+V K DYIHVRARRGQATDSHSLAER RREKIS++MKYLQDLVPGCNK
Sbjct: 169 HSEISPNASKVSGSPKPDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNK 228
Query: 143 ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIG 202
ITGKAGMLDEIINYVQSLQRQVEFLS+KLA +NPR DFN+D KE + FPT
Sbjct: 229 ITGKAGMLDEIINYVQSLQRQVEFLSLKLATMNPRTDFNLDTFLGKEFPAYVAAGFPTAA 288
Query: 203 MSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGI-INPSEMGLRRTISAPVSAPETFIDSSC 261
SSEM + +L QF + Q SC +L + I+P + L+ T S+ S PE F +S+
Sbjct: 289 ASSEMAN-LPFL-QFQPVPQGITSC---ELHMPIDPPQSALQMTTSSSTSVPEMFTNSTS 343
Query: 262 YPHLQPSSNWDSDLQNFYN 280
+ +QP + WD+DLQ+ Y
Sbjct: 344 FSQVQPFTTWDTDLQSLYT 362
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 138/303 (45%), Positives = 170/303 (56%), Gaps = 62/303 (20%)
Query: 4 QQVKPDPAFENGWPDLGKIVAPAAGYGF---GPGFE----------ASYAISRTSSSPPA 50
+ +K + +++NG P LG P AG F G GFE ++ISRTSS P
Sbjct: 60 RSMKAENSWDNGLPGLGDF--PTAGTDFRGHGMGFELPEIAGSSLEMDHSISRTSSCPLP 117
Query: 51 VVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKAD----------KVQN---------- 90
+ A V G+ GR S KKRKA+ K++
Sbjct: 118 DLGAATSVDGR-----------ELAGRNSVKKRKAEVALTEECKDQKIKRDEEEEESKIE 166
Query: 91 ----------TKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
+K S K DYIHVRARRGQATDSHSLAER RREKIS++MKYLQDLVPGC
Sbjct: 167 EKHSEISPNASKVSGSPKPDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGC 226
Query: 141 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPT 200
NKITGKAGMLDEIINYVQSLQRQVEFLS+KLA +NPR DFN+D KE + FPT
Sbjct: 227 NKITGKAGMLDEIINYVQSLQRQVEFLSLKLATMNPRTDFNLDTFLGKEFPAYVAAGFPT 286
Query: 201 IGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGI-INPSEMGLRRTISAPVSAPETFIDS 259
SSEM + +L QF + Q SC +L + I+P + L+ T S+ S PE F +S
Sbjct: 287 AAASSEMAN-LPFL-QFQPVPQGITSC---ELHMPIDPPQSALQMTTSSSTSVPEMFTNS 341
Query: 260 SCY 262
+ +
Sbjct: 342 TSF 344
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 199 bits (507), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 134/199 (67%), Gaps = 19/199 (9%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
+NTK E K DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGCNK+TGKA
Sbjct: 359 ENTKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAV 417
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEA--FPVCPSNFPTIGMSSE 206
MLDEIINYVQSLQRQVEFLSMKLAAVNPRL+FNV++L KE P+NF +G
Sbjct: 418 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLEFNVESLLGKEVPHGRASPTNF-VLG---- 472
Query: 207 MTHPAAYLHQFNSLQQQAVSCSGLDLGIINP-SEMGLRRTISAPVSAPETFIDSSCYPHL 265
P +Y Q + Q A+ +G DL + E+ +RR + P +D P
Sbjct: 473 ---PQSYSQQLHQAQHSALQLAGFDLRTLTGLQEVAMRRG-AFPC------LDPYSDPAS 522
Query: 266 QPSSNWDSDLQNFYNVASF 284
Q SS WD +LQN ++ F
Sbjct: 523 QTSSVWDGELQNIVHMMGF 541
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/217 (52%), Positives = 141/217 (64%), Gaps = 25/217 (11%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGC+K+TGKA MLDEIINYVQS
Sbjct: 400 DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQS 459
Query: 160 LQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEM---THPAAYLHQ 216
LQRQVEFLSMKLA VNPRLDFN+D L AK+ + G S M T P A Q
Sbjct: 460 LQRQVEFLSMKLATVNPRLDFNMDGLIAKDM-------LQSHGSSPRMLFSTDPTAAFPQ 512
Query: 217 FNSLQQQ----AVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWD 272
+ QQ V+C + +P E LRRT++A + + DS P + ++ WD
Sbjct: 513 LHQPQQGPVQVGVTCGTEGHRMGHPVEGALRRTMNAQPPCIDGYGDS--IPQV--ANVWD 568
Query: 273 SDLQNFYNV-------ASFPSQQFTGTLEASNLKMEM 302
DLQ+ + + F SQ F G++ S++K+E+
Sbjct: 569 EDLQSVVQMGFGQNRQSPFTSQGFHGSVPTSHMKIEL 605
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 128/186 (68%), Gaps = 18/186 (9%)
Query: 95 EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 154
E++K DYIHVRARRGQATDSHS+AERVRREKISERMK+LQDLVPGC+KITGKAGMLDEII
Sbjct: 160 ELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEII 219
Query: 155 NYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYL 214
NYVQSLQRQ+EFLSMKLA VNPR DF++D++F KE P T+ S EM H + Y
Sbjct: 220 NYVQSLQRQIEFLSMKLAVVNPRPDFDMDDIFDKEVIVSTPM---TVVPSPEMVH-SGYS 275
Query: 215 HQF-NSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDS 273
H+ NS + SG +NP M T S P+ SC+ + Q S WDS
Sbjct: 276 HEMVNSGYSNEMVNSGYHH--VNP--MQQAETSSDPL---------SCFNNGQAPSMWDS 322
Query: 274 DLQNFY 279
+QN Y
Sbjct: 323 YVQNLY 328
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 106/190 (55%), Positives = 124/190 (65%), Gaps = 27/190 (14%)
Query: 95 EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 154
E++K DYIHVRARRGQATDSHS+AERVRREKISERMK+LQDLVPGC+KITGKAGMLDEII
Sbjct: 163 ELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEII 222
Query: 155 NYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEA----FPVCPS-NFPTIGMSSEMTH 209
NYVQSLQRQ+EFLSMKLA VNPR DF++D++FAKE V PS G S EM H
Sbjct: 223 NYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEVASTPMTVVPSPEMVLSGYSHEMVH 282
Query: 210 PAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSS 269
NS G ++ + M T S P+ SC+ + + S
Sbjct: 283 SGYSSEMVNS-------------GYLHVNPMQQVNTSSDPL---------SCFNNGEAPS 320
Query: 270 NWDSDLQNFY 279
WDS +QN Y
Sbjct: 321 MWDSHVQNLY 330
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 106/190 (55%), Positives = 124/190 (65%), Gaps = 27/190 (14%)
Query: 95 EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 154
E++K DYIHVRARRGQATDSHS+AERVRREKISERMK+LQDLVPGC+KITGKAGMLDEII
Sbjct: 163 ELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEII 222
Query: 155 NYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEA----FPVCPS-NFPTIGMSSEMTH 209
NYVQSLQRQ+EFLSMKLA VNPR DF++D++FAKE V PS G S EM H
Sbjct: 223 NYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEVASTPMTVVPSPEMVLSGYSHEMVH 282
Query: 210 PAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSS 269
NS G ++ + M T S P+ SC+ + + S
Sbjct: 283 SGYSSEMVNS-------------GYLHVNPMQQVNTSSDPL---------SCFNNGEAPS 320
Query: 270 NWDSDLQNFY 279
WDS +QN Y
Sbjct: 321 MWDSHVQNLY 330
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 106/190 (55%), Positives = 124/190 (65%), Gaps = 27/190 (14%)
Query: 95 EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 154
E++K DYIHVRARRGQATDSHS+AERVRREKISERMK+LQDLVPGC+KITGKAGMLDEII
Sbjct: 163 ELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEII 222
Query: 155 NYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEA----FPVCPS-NFPTIGMSSEMTH 209
NYVQSLQRQ+EFLSMKLA VNPR DF++D++FAKE V PS G S EM H
Sbjct: 223 NYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEVASTPMTVVPSPEMVLSGYSHEMVH 282
Query: 210 PAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSS 269
NS G ++ + M T S P+ SC+ + + S
Sbjct: 283 SGYSSEMVNS-------------GYLHVNPMQQVNTSSDPL---------SCFNNGEAPS 320
Query: 270 NWDSDLQNFY 279
WDS +QN Y
Sbjct: 321 MWDSHVQNLY 330
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/221 (52%), Positives = 144/221 (65%), Gaps = 18/221 (8%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
Q +AS+ K +YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+K+TGKA
Sbjct: 287 QGAQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 346
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFP--VCPSNFPTIGMSSE 206
MLDEIINYVQSLQRQVEFLSMKLA VNPRLDFN++ + K+ V PS+ T+G S E
Sbjct: 347 MLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGMLGKDILQSRVGPSS--TMGFSPE 404
Query: 207 MTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQ 266
T P LH Q + GL G+ N S+ +RRTI++ ++A S P L
Sbjct: 405 TTMPYPQLHP----SQPGLIQVGLP-GLGNSSD-AIRRTINSQLAAMSGGYKESA-PQL- 456
Query: 267 PSSNWDSDLQN-----FYNVASFPSQQFTGTLEASNLKMEM 302
+ W+ +L N F A SQ G+L ++K E+
Sbjct: 457 -PNVWEDELHNVVQMGFSTGAPLNSQDLNGSLPPGHMKAEL 496
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/165 (61%), Positives = 119/165 (72%), Gaps = 13/165 (7%)
Query: 92 KASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLD 151
+ SE QK DYIHVRARRGQAT+SHSLAER+RREKISERMK LQDLVPGC+K+TGKA MLD
Sbjct: 244 ETSESQKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLD 303
Query: 152 EIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEA--FPVCPSNFPTIGMSSEMTH 209
EIINYVQSLQRQVEFLSMKLA VNPRLD N++ L +K+ FP PS+ ++G S EM H
Sbjct: 304 EIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLRFPGVPSS--SLGFSPEMMH 361
Query: 210 PAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPE 254
P L Q +Q A G+ NP RR + A +SA +
Sbjct: 362 PQLQLSQPGLIQGGAA-------GMANPDV--FRRIMQAQLSAKD 397
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 102/165 (61%), Positives = 119/165 (72%), Gaps = 13/165 (7%)
Query: 92 KASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLD 151
+ SE QK DYIHVRARRGQAT+SHSLAER+RREKISERMK LQDLVPGC+K+TGKA MLD
Sbjct: 241 ETSESQKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLD 300
Query: 152 EIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE--AFPVCPSNFPTIGMSSEMTH 209
EIINYVQSLQRQVEFLSMKLA VNPRLD N++ L +K+ FP PS+ ++G S EM H
Sbjct: 301 EIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLRFPGVPSS--SLGFSPEMMH 358
Query: 210 PAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPE 254
P L Q +Q A G+ NP RR + A +SA +
Sbjct: 359 PQLQLSQPGLIQGGAA-------GMANPDV--FRRIMQAQLSAKD 394
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 111/200 (55%), Positives = 128/200 (64%), Gaps = 26/200 (13%)
Query: 84 KADKVQNTKASEVQKHD-YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 142
K K +N+ S QK D YIHVRARRGQATDSHSLAERVRREKI++RMK+LQDLVP CNK
Sbjct: 277 KKGKEKNSNVS--QKDDNYIHVRARRGQATDSHSLAERVRREKINQRMKFLQDLVPTCNK 334
Query: 143 ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIG 202
+TGKA MLDEIINYVQSLQ QVEFLSMKLA VNP+LDFN+DN FAKE +F + G
Sbjct: 335 VTGKAVMLDEIINYVQSLQHQVEFLSMKLATVNPKLDFNIDNFFAKE----MSGSFSSKG 390
Query: 203 MSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCY 262
MS H L Q Q V G D+ PS M + V + E F +
Sbjct: 391 MSPTYFH----LDQLKQASLQTVPSPGSDI----PSTM-------SSVDSAEMFDGT--- 432
Query: 263 PHLQPSSNWDSDLQNFYNVA 282
+ Q WDS+LQN YN+
Sbjct: 433 -NFQRQEGWDSELQNMYNMG 451
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 189 bits (481), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 115/229 (50%), Positives = 144/229 (62%), Gaps = 26/229 (11%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
Q +AS+ K +YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+K+TGKA
Sbjct: 392 QGAQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 451
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVC----------PSNF 198
MLDEIINYVQSLQRQVEFLSMKLA VNPRLDFN++ + K+ + PS+
Sbjct: 452 MLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGMLGKDVSEIAXQKILQSRVGPSS- 510
Query: 199 PTIGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFID 258
T+G S E T P LH Q + GL G+ N S+ +RRTI++ ++A
Sbjct: 511 -TMGFSPETTMPYPQLHP----SQPGLIQVGLP-GLGNSSD-AIRRTINSQLAAMSGGYK 563
Query: 259 SSCYPHLQPSSNWDSDLQN-----FYNVASFPSQQFTGTLEASNLKMEM 302
S P L + W+ +L N F A SQ G+L ++K E+
Sbjct: 564 ESA-PQL--PNVWEDELHNVVQMGFSTGAPLNSQDLNGSLPPGHMKAEL 609
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 120/175 (68%), Gaps = 17/175 (9%)
Query: 92 KASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLD 151
+ SE QK +YIHVRARRGQAT+SHSLAER+RREKISERMK LQDLVPGC+K+TGKA MLD
Sbjct: 236 ETSESQKEEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLD 295
Query: 152 EIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEA--FPVCPSNFPTIGMSSEMTH 209
EIINYVQSLQRQVEFLSMKLA VNPRLD N++ L +K+ FP PS+ +IG S EM H
Sbjct: 296 EIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLRFPGVPSS--SIGFSPEMMH 353
Query: 210 PAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPH 264
P L Q + G G+ NP RR I A + A D S PH
Sbjct: 354 PQLQLSQPGLIH-------GGTAGMANPDV--FRRIIQAQLGAK----DGSQMPH 395
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 120/175 (68%), Gaps = 17/175 (9%)
Query: 92 KASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLD 151
+ SE QK +YIHVRARRGQAT+SHSLAER+RREKISERMK LQDLVPGC+K+TGKA MLD
Sbjct: 617 ETSESQKEEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLD 676
Query: 152 EIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEA--FPVCPSNFPTIGMSSEMTH 209
EIINYVQSLQRQVEFLSMKLA VNPRLD N++ L +K+ FP PS+ +IG S EM H
Sbjct: 677 EIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLRFPGVPSS--SIGFSPEMMH 734
Query: 210 PAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPH 264
P L Q + G G+ NP RR I A + A D S PH
Sbjct: 735 PQLQLSQPGLIH-------GGTAGMANPDV--FRRIIQAQLGAK----DGSQMPH 776
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/172 (60%), Positives = 118/172 (68%), Gaps = 17/172 (9%)
Query: 95 EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 154
E QK +YIHVRARRGQAT+SHSLAER+RREKISERMK LQDLVPGC+K+TGKA MLDEII
Sbjct: 239 ESQKEEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEII 298
Query: 155 NYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEA--FPVCPSNFPTIGMSSEMTHPAA 212
NYVQSLQRQVEFLSMKLA VNPRLD N++ L +K+ FP PS+ +IG S EM HP
Sbjct: 299 NYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLRFPGVPSS--SIGFSPEMMHPQL 356
Query: 213 YLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPH 264
L Q + G G+ NP RR I A + A D S PH
Sbjct: 357 QLSQPGLIH-------GGTAGMANPDV--FRRIIQAQLGAK----DGSQMPH 395
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/228 (46%), Positives = 133/228 (58%), Gaps = 37/228 (16%)
Query: 91 TKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGML 150
++AS+ K +YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+K+TGKA ML
Sbjct: 208 SQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 267
Query: 151 DEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHP 210
DEIINYVQSLQRQVEFLSMKLA VNPRLDFN++ L AK+ P +G +M+
Sbjct: 268 DEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILQQRPGPSSALGFPLDMSMA 327
Query: 211 AAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSN 270
LH P + GL + ++ + + +P L P +
Sbjct: 328 FPPLH---------------------PPQPGLIHPVIPNMANSSDILQRTIHPQLAPLNG 366
Query: 271 -----------WDSDLQN-----FYNVASFPSQQFTGTLEASNLKMEM 302
W+ +L N F A SQ F GT AS +K+E+
Sbjct: 367 GLKEPNQLPDVWEDELHNVVQMSFATTAPLTSQDFDGTGPASQMKVEL 414
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 98/149 (65%), Positives = 110/149 (73%), Gaps = 14/149 (9%)
Query: 95 EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 154
E++K DYIHVRARRGQATDSHS+AERVRREKISERMK+LQDLVPGC+KITGKAGMLDEII
Sbjct: 163 ELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEII 222
Query: 155 NYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEA----FPVCPS-NFPTIGMSSEMTH 209
NYVQSLQRQ+EFLSMKLA VNPR DF++D++FAKE V PS G S EM H
Sbjct: 223 NYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEVASTPMTVVPSPEMVLSGYSHEMVH 282
Query: 210 P--------AAYLHQFNSLQQQAVSCSGL 230
+ YLH N +QQ S L
Sbjct: 283 SGYSSEMVNSGYLH-VNPMQQVNTSSDPL 310
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/246 (48%), Positives = 158/246 (64%), Gaps = 31/246 (12%)
Query: 68 NEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKIS 127
++K ++ + S K+ K Q ++ S+ K +YIHVRARRGQAT+SHSLAERVRREKIS
Sbjct: 337 DQKPTSTTSKASGKQGK----QGSQGSDQPKEEYIHVRARRGQATNSHSLAERVRREKIS 392
Query: 128 ERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFA 187
ERMK+LQDLVPGC+K+TGKA MLDEIINYVQSLQRQVEFLSMKLA VNPRLDFN++ L A
Sbjct: 393 ERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLA 452
Query: 188 KEAF---PVCPSNFPTIGMSSEMTHPAAY--LHQFNSLQQQAVSCSGLDLGIINPSEMGL 242
K+ V PS ++ SSEM P AY LHQ Q + + G+ + S++ +
Sbjct: 453 KDILQSRAVPPS---SLAFSSEM--PMAYPALHQ----SQPGLIPTAFP-GMESHSDI-I 501
Query: 243 RRTISAPVSA-PETFIDSSCYPHLQPSSNWDSDLQN-----FYNVASFPSQQFTGTLEAS 296
RRTI++ ++A F + + P++ WD +L N + A SQ L
Sbjct: 502 RRTINSQLTAMTAGFKEPAQLPNV-----WDDELHNVVQMTYGTSAPQDSQDVNEPLPPG 556
Query: 297 NLKMEM 302
+LK+E+
Sbjct: 557 HLKVEL 562
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 105/208 (50%), Positives = 133/208 (63%), Gaps = 10/208 (4%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGCNK+TGKA MLDEIINYVQS
Sbjct: 23 DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 82
Query: 160 LQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFP---VCPSNFPTIGMSSEMTHPAAYLHQ 216
LQRQVEFLSMK+A VNP+++ N++ +K+ F P + SS P Y Q
Sbjct: 83 LQRQVEFLSMKMATVNPKMEINMETFLSKDIFQSRGSMPHGLYPLD-SSTPAFPYGYQSQ 141
Query: 217 FNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQ 276
Q +S + +NP LRR+ S + A + F D+S Q S+ W DLQ
Sbjct: 142 QGLALQDGMSRNAESQFSMNPLNAALRRSSSMQLPALDGFGDASH----QASAMWQDDLQ 197
Query: 277 NFYNVASFPSQQ--FTGTLEASNLKMEM 302
+ + +QQ F G++ + +K+E+
Sbjct: 198 SVVQMGYGQNQQQDFQGSVPPTQMKIEL 225
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/201 (51%), Positives = 128/201 (63%), Gaps = 22/201 (10%)
Query: 81 KKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
KK + K Q ++S+ K YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC
Sbjct: 279 KKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGC 338
Query: 141 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPT 200
NK+TGKA MLDEIINYVQSLQRQVEFLSMKLA VNP++DFN++ L AK+A + + T
Sbjct: 339 NKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAGSSST 398
Query: 201 IGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSS 260
M+ AY + QQ +S G RTI++P+S
Sbjct: 399 TPFPPNMS--MAYPPLPHGFMQQTLSSIG--------------RTITSPLSPMNGGF--- 439
Query: 261 CYPHLQPSSNWDSDLQNFYNV 281
Q ++ W+ DLQN ++
Sbjct: 440 ---KRQETNGWEGDLQNVIHI 457
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/201 (51%), Positives = 128/201 (63%), Gaps = 22/201 (10%)
Query: 81 KKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
KK + K Q ++S+ K YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC
Sbjct: 280 KKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGC 339
Query: 141 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPT 200
NK+TGKA MLDEIINYVQSLQRQVEFLSMKLA VNP++DFN++ L AK+A + + T
Sbjct: 340 NKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAGSSST 399
Query: 201 IGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSS 260
M+ AY + QQ +S G RTI++P+S
Sbjct: 400 TPFPPNMS--MAYPPLPHGFMQQTLSSIG--------------RTITSPLSPMNGGF--- 440
Query: 261 CYPHLQPSSNWDSDLQNFYNV 281
Q ++ W+ DLQN ++
Sbjct: 441 ---KRQETNGWEGDLQNVIHI 458
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/273 (42%), Positives = 160/273 (58%), Gaps = 27/273 (9%)
Query: 49 PAVVPEAVDVKGKVSVAALNEKVSA---------AVGRESFKKRKADKVQNTKASEVQK- 98
P+ P A DVK VAA N++ A +++ K+++ + + K
Sbjct: 304 PSSSPSASDVK----VAAENDESKAKRSKSDETNGSDKDTAKEKEEENGNQKQNKNNSKP 359
Query: 99 ----HDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 154
DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGCNK+TGKA MLDEII
Sbjct: 360 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 419
Query: 155 NYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFP---VCPSNFPTIGMSSEMTHPA 211
NYVQSLQRQVEFLSMKL++VNPR++ N++ L +K+ F P + + S+ + P
Sbjct: 420 NYVQSLQRQVEFLSMKLSSVNPRMEINMETLLSKDIFQSRGSMPHSLYPLDASTPV-FPY 478
Query: 212 AYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNW 271
Y Q Q + + +NP LRR S + + F D + LQ S+ W
Sbjct: 479 GYQSQQGLALQNGMPSNAETQFSMNPLNAALRRNPSMHLPHLDGFGDPAA---LQASAMW 535
Query: 272 DSDLQNFYNVASFPSQQ--FTGTLEASNLKMEM 302
+ DLQ+ + + Q F G++ ++++K+E+
Sbjct: 536 EDDLQSVVQMGYGQNHQESFQGSVPSTHMKIEL 568
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 100/170 (58%), Positives = 116/170 (68%), Gaps = 17/170 (10%)
Query: 97 QKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 156
+K DYIHVRARRGQAT+SHSLAER+RREKISERMK LQDLVPGC+K+TGKA MLDEIINY
Sbjct: 234 EKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINY 293
Query: 157 VQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE--AFPVCPSNFPTIGMSSEMTHPAAYL 214
VQSLQRQVEFLSMKLA VNPRLD N++ L +K+ FP S+ +IG S EM HP L
Sbjct: 294 VQSLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLRFPGVSSS--SIGFSPEMMHPQLQL 351
Query: 215 HQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPH 264
Q +Q A + D+ RR + A + A D S PH
Sbjct: 352 SQPGLMQGGAAGMANQDV---------FRRIMQAQLGAK----DGSQMPH 388
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/219 (50%), Positives = 135/219 (61%), Gaps = 14/219 (6%)
Query: 90 NTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 149
N K E K DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGCNK+TGKA M
Sbjct: 359 NPKPPEAPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 417
Query: 150 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAF----PVCPSNFPTIGMSS 205
LDEIINYVQSLQRQVEFLSMKLA VNPR+DFN++ L +KE F + + +P SS
Sbjct: 418 LDEIINYVQSLQRQVEFLSMKLATVNPRMDFNMEALLSKEIFQSRGSLPQAMYPLD--SS 475
Query: 206 EMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHL 265
+ P Y Q Q + +NP +RRT S S ID
Sbjct: 476 ALAFPYGYQPQQGPSLQNGIPNGTETPFSVNPLNSAIRRTSSMLPS-----IDGFGEAAS 530
Query: 266 QPSSNWDSDLQNF--YNVASFPSQQFTGTLEASNLKMEM 302
Q S+ W+ +L + + Q F G++ A+ +K+E+
Sbjct: 531 QVSTFWEDELHSVVQMGIGQNQPQGFPGSMGAAQMKIEL 569
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 111/219 (50%), Positives = 135/219 (61%), Gaps = 14/219 (6%)
Query: 90 NTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 149
N K E K DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGCNK+TGKA M
Sbjct: 359 NPKPPEAPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 417
Query: 150 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAF----PVCPSNFPTIGMSS 205
LDEIINYVQSLQRQVEFLSMKLA VNPR+DFN++ L +KE F + + +P SS
Sbjct: 418 LDEIINYVQSLQRQVEFLSMKLATVNPRMDFNMEALLSKEIFQSRGSLPQAMYPLD--SS 475
Query: 206 EMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHL 265
+ P Y Q Q + +NP +RRT S S ID
Sbjct: 476 ALAFPYGYQPQQGPSLQNGIPNGTETPFSVNPLNSAIRRTSSMLPS-----IDGFGEAAS 530
Query: 266 QPSSNWDSDLQNF--YNVASFPSQQFTGTLEASNLKMEM 302
Q S+ W+ +L + + Q F G++ A+ +K+E+
Sbjct: 531 QVSTFWEDELHSVVQMGIGQNQPQGFPGSMGAAQMKIEL 569
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 124/283 (43%), Positives = 165/283 (58%), Gaps = 32/283 (11%)
Query: 43 RTSSSPPAVVPEAVDVKGKVSVAALN-----EKVSAAVGRESFKKRKADKVQNTKASEVQ 97
+++S+PPA + + + + E ++ V E K D +QN S
Sbjct: 290 QSASNPPASATKDAETDDNSNTKRIKPNEGEENENSPVKAEEEPKGSGDDIQNKANSRPP 349
Query: 98 K--HDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIIN 155
+ DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNK+TGKA MLDEIIN
Sbjct: 350 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 409
Query: 156 YVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVC-PSNFPTIGMSSEMTHPAAYL 214
YVQSLQRQVEFLSMKLA+VN RLDFN+D L +K+ F P P + S + PAA
Sbjct: 410 YVQSLQRQVEFLSMKLASVNTRLDFNMDTLISKDIFQSSQPLPHPIFPLDS--SAPAAI- 466
Query: 215 HQFNSLQQQ------AVSCSGLDLGIINPSE-MGLRRTISAPVSAPETFIDSSCYPHLQP 267
F+ QQQ +S + ++P + GL +T++A + + F ++ H P
Sbjct: 467 --FSHQQQQNPPLHSNISNGAVTHCSVDPLDTTGLCQTLNAQLPPLDGFTQNA---HQYP 521
Query: 268 SSNWDSDLQNFY--------NVASFPSQQFTGTLEASNLKMEM 302
+ D DLQ N+ +F Q F G+ + S++K+E+
Sbjct: 522 TFCED-DLQTIVQMGYGQNPNLETFLPQNFHGSNQVSHMKIEL 563
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 104/201 (51%), Positives = 130/201 (64%), Gaps = 23/201 (11%)
Query: 82 KRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCN 141
K + K Q ++S++ K YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGCN
Sbjct: 281 KTNSGKRQGKQSSDLPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCN 340
Query: 142 KITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPV-CPSNFPT 200
K+TGKA MLDEIINYVQSLQRQVEFLSMKLA VNP++DFN++ L AK+A + S+ T
Sbjct: 341 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAGSSSTT 400
Query: 201 IGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSS 260
+ M AY + QQ +S G RTIS+P+S+
Sbjct: 401 TPFTPNMA--MAYPPLPHGFMQQTLSSIG--------------RTISSPLSSMNGGF--- 441
Query: 261 CYPHLQPSSNWDSDLQNFYNV 281
Q ++ W+ DLQN ++
Sbjct: 442 ---KRQETNGWEGDLQNVIHI 459
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 102/201 (50%), Positives = 128/201 (63%), Gaps = 22/201 (10%)
Query: 81 KKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
KK + K Q ++S+ K YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC
Sbjct: 280 KKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGC 339
Query: 141 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPT 200
NK+TGKA MLDEIINYVQSLQRQVEFLSMKLA VNP++DFN++ L AK+A + + T
Sbjct: 340 NKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAGSSST 399
Query: 201 IGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSS 260
M+ +Y + QQ +S G RTI++P+S
Sbjct: 400 TPFPPNMS--MSYPPLPHGFMQQTLSSIG--------------RTITSPLSPMNGGF--- 440
Query: 261 CYPHLQPSSNWDSDLQNFYNV 281
Q ++ W+ DLQN ++
Sbjct: 441 ---KRQETNGWEGDLQNVIHI 458
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 131/219 (59%), Gaps = 18/219 (8%)
Query: 7 KPDPAFENGWPDLGK---IVAPAAGYGFGPGFEASYAISRTSSSPPAVV----------P 53
K D E G P+LG+ +++P A G G + S+ P VV P
Sbjct: 147 KKDVVGEKGEPELGRDDGVLSPEAAGG-GDCSSKGTSDSKKRRRPNEVVGSDQVQSANLP 205
Query: 54 EAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATD 113
A V E+ S A K+ + E QK DYIH+RARRGQAT+
Sbjct: 206 SADSANESVHSMDKGEESSPATTTAGAGPGKSRGKGEKEVPESQKEDYIHIRARRGQATN 265
Query: 114 SHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAA 173
SHSLAER+RREKISERMK LQDLVPGC+K+TGKA MLDEIINYVQSLQRQVEFLSMKLA
Sbjct: 266 SHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAT 325
Query: 174 VNPRLDFNVDNLFAKEA--FPVCPSNFPTIGMSSEMTHP 210
VNPRLD N++ L +K+ FP PS+ ++G EM HP
Sbjct: 326 VNPRLDLNIEGLLSKDLLRFPGAPSS--SLGFPPEMMHP 362
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 131/219 (59%), Gaps = 18/219 (8%)
Query: 7 KPDPAFENGWPDLGK---IVAPAAGYGFGPGFEASYAISRTSSSPPAVV----------P 53
K D E G P+LG+ +++P A G G + S+ P VV P
Sbjct: 137 KKDVVGEKGEPELGRDDGVLSPEAAGG-GDCSSKGTSDSKKRRRPNEVVGSDQVQSANLP 195
Query: 54 EAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATD 113
A V E+ S A K+ + E QK DYIH+RARRGQAT+
Sbjct: 196 SADSANESVHSMDKGEESSPATTTAGAGPGKSRGKGEKEVPESQKEDYIHIRARRGQATN 255
Query: 114 SHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAA 173
SHSLAER+RREKISERMK LQDLVPGC+K+TGKA MLDEIINYVQSLQRQVEFLSMKLA
Sbjct: 256 SHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAT 315
Query: 174 VNPRLDFNVDNLFAKEA--FPVCPSNFPTIGMSSEMTHP 210
VNPRLD N++ L +K+ FP PS+ ++G EM HP
Sbjct: 316 VNPRLDLNIEGLLSKDLLRFPGAPSS--SLGFPPEMMHP 352
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/299 (42%), Positives = 159/299 (53%), Gaps = 71/299 (23%)
Query: 19 LGKIVAPAAGYGFGPGFEASYAISRTSS---SPPAVV--------------------PEA 55
LG P GFGP EA ISRTSS P + PE
Sbjct: 73 LGSGFGPNYNIGFGPPHEA---ISRTSSCHMEPVDTIEVLLKTGEENRAIALKNKRNPE- 128
Query: 56 VDVKG------KVSVAALNEKVSAAVGRESFKKRKAD----KVQNTKASEVQKHDYIHVR 105
V +G K+ V A E S+ G+ + + +A K + KASE+QK DYIHVR
Sbjct: 129 VKTRGEEKTEKKIKVEAETE--SSMKGKSNMRNTEASSDTSKETSKKASEIQKLDYIHVR 186
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
ARRGQATD HSLAER RREKIS++MKYLQD+VPGCNK+TGKAGMLDEIINYVQ LQRQVE
Sbjct: 187 ARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVE 246
Query: 166 FLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQAV 225
FLSMKLA +NP L+ V+++ K+ F +N S + P L Q S
Sbjct: 247 FLSMKLAVLNPELELAVEDVSVKQ-FQAYFTNVVASKQSIMVDVPLFPLDQQGS------ 299
Query: 226 SCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQNFYNVASF 284
LDL INP++ T I++ PS++W++ Q+ YN +S
Sbjct: 300 ----LDLSAINPNQT--------------TSIEA-------PSASWETQSQSLYNTSSL 333
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/228 (46%), Positives = 132/228 (57%), Gaps = 37/228 (16%)
Query: 91 TKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGML 150
++AS+ K +YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+K+TGKA ML
Sbjct: 345 SQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVML 404
Query: 151 DEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHP 210
DEIINYVQSLQRQVEFLSMKLA VNPRLDFN++ L AK+ P +G +M+
Sbjct: 405 DEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILQQRPDPSTALGFPLDMSMA 464
Query: 211 AAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSN 270
LH P + GL + ++ + + +P L P +
Sbjct: 465 FPPLH---------------------PPQPGLIHPVIPNMTNSSDILQRTIHPQLAPLNG 503
Query: 271 -----------WDSDLQN-----FYNVASFPSQQFTGTLEASNLKMEM 302
W+ +L N F A SQ GT AS +K+E+
Sbjct: 504 GFKEPNQLPDVWEDELHNVVQMSFATTAPPTSQDVDGTGPASQMKVEL 551
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/296 (42%), Positives = 156/296 (52%), Gaps = 67/296 (22%)
Query: 19 LGKIVAPAAGYGFGPGFEASYAISRTSSS--PPAVVPEAVDVKGKVS--VAALNEKVSAA 74
LG P GFGP E+ ISRTSS P E + G+ + VA N++
Sbjct: 73 LGSGFGPNYNMGFGPPHES---ISRTSSCHMEPVDTMEVLLKTGEETRAVALKNKRKPEV 129
Query: 75 VGRESFKKRKADKVQ--------------NTKAS------------EVQKHDYIHVRARR 108
RE K K KV+ NT+AS E QK DYIHVRARR
Sbjct: 130 KTREEQKTEKKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARR 189
Query: 109 GQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
GQATD HSLAER RREKIS++MKYLQD+VPGCNK+TGKAGMLDEIINYVQ LQRQVEFLS
Sbjct: 190 GQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLS 249
Query: 169 MKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQAVSCS 228
MKLA +NP L+ V+++ K+A+ F + S + L L QQ
Sbjct: 250 MKLAVLNPELELAVEDVSVKQAY------FTNVVASKQSIMVDVPLF---PLDQQG---- 296
Query: 229 GLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQNFYNVASF 284
LDL INP++ T I++ PS +W++ Q+ YN +S
Sbjct: 297 SLDLSAINPNQT--------------TSIEA-------PSGSWETQSQSLYNTSSL 331
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/187 (53%), Positives = 122/187 (65%), Gaps = 16/187 (8%)
Query: 97 QKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 156
+K DYIHVRARRGQAT+SHSLAER+RREKISERMK LQDLVPGC+K+TGKA MLDEIINY
Sbjct: 234 EKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINY 293
Query: 157 VQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE--AFPVCPSNFPTIGMSSEMTHPAAYL 214
VQSLQRQVEFLSMKLA VNPRLD N++ L +K+ FP S+ ++G S EM HP L
Sbjct: 294 VQSLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLRFPGVSSS--SMGFSPEMMHPQLQL 351
Query: 215 HQFNSLQQQAVSCSGLD---------LGIINPSEMGLRRTISAPVSAPETFIDSSCYPHL 265
Q +Q A + + D LG + S + ++ P S + YP +
Sbjct: 352 SQPGLMQGGAAAMANSDVFRRIMQAQLGAKDGSHSQMAHALNGPFS---EHVAQMAYPSM 408
Query: 266 QPSSNWD 272
S + D
Sbjct: 409 GSSHSQD 415
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/221 (48%), Positives = 135/221 (61%), Gaps = 16/221 (7%)
Query: 91 TKASEV---QKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKA 147
T AS V QK DYIHVRARRGQATDSHSLAERVRRE+ISERM+YLQ+LVPGCNK+TGKA
Sbjct: 148 TSASTVTAGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKA 207
Query: 148 GMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN-VDNLFAKE-AFPVC-PSNFPTIGMS 204
GMLDEIINYVQSLQ+QVEFLSMK+AA NP ++FN V++LF ++ + C P+ P + +
Sbjct: 208 GMLDEIINYVQSLQKQVEFLSMKIAASNPVVNFNIVEDLFGRQLSQAACNPAALPAMALP 267
Query: 205 SEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTIS---APVSAPETFIDSSC 261
P+ Q + LQQ S G+ EM + S P+S P C
Sbjct: 268 MAQVEPSCL--QMSPLQQMQTSAGSSGYGL----EMVVSNQYSPPGGPMSVPAGASVEPC 321
Query: 262 YPHLQPSSNWDSDLQNFYNVASFPSQQFTGTLEASNLKMEM 302
++ ++ WD ++ P Q NLKMEM
Sbjct: 322 L-NVNGAAGWDIGSHGLFSGFDAPFQSVQSDCLLDNLKMEM 361
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/221 (48%), Positives = 135/221 (61%), Gaps = 16/221 (7%)
Query: 91 TKASEV---QKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKA 147
T AS V QK DYIHVRARRGQATDSHSLAERVRRE+ISERM+YLQ+LVPGCNK+TGKA
Sbjct: 148 TSASTVTAGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKA 207
Query: 148 GMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN-VDNLFAKE-AFPVC-PSNFPTIGMS 204
GMLDEIINYVQSLQ+QVEFLSMK+AA NP ++FN V++LF ++ + C P+ P + +
Sbjct: 208 GMLDEIINYVQSLQKQVEFLSMKIAASNPVVNFNIVEDLFGRQLSQAACNPAALPAMALP 267
Query: 205 SEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTIS---APVSAPETFIDSSC 261
P+ Q + LQQ S G+ EM + S P+S P C
Sbjct: 268 MAQVEPSCL--QMSPLQQMQTSAGSSGYGL----EMVVSNQYSPPGGPMSVPAGASVEPC 321
Query: 262 YPHLQPSSNWDSDLQNFYNVASFPSQQFTGTLEASNLKMEM 302
++ ++ WD ++ P Q NLKMEM
Sbjct: 322 L-NVNGAAGWDIGSHGLFSGFDAPFQSVQSDCLLDNLKMEM 361
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 129/312 (41%), Positives = 166/312 (53%), Gaps = 32/312 (10%)
Query: 16 WPDLGKIVAPAAGYGFGPGFEASYAISRTSSSPPAVVPEAVDV-----------KGKVSV 64
WPD+ A G+G P E S + S S D +GK V
Sbjct: 57 WPDMSSACY-AGGFGATPVQEVSNGGNSFSCSGGGSTKRKSDAYLDAKGECKRPRGKQQV 115
Query: 65 AALN--------EKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHS 116
L+ EK A R+ K A + Q+ +A+ QK DYIHVRARRGQATDSHS
Sbjct: 116 CELDQSSGRGKPEKAKPAGTRK--KGDVAAQKQDPRAAGGQKTDYIHVRARRGQATDSHS 173
Query: 117 LAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNP 176
LAERVRRE+ISERM+YLQ+LVPGC+K+TGKAGMLDEIINYVQSLQ+QVEFLSMK+AA NP
Sbjct: 174 LAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNP 233
Query: 177 RLDFN-VDNLF-AKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGI 234
++F+ V++LF + C T+ M + L Q + Q A + GL++ +
Sbjct: 234 VVNFDIVEDLFGGRRLGQACSPAAATMPMPIHGQMDTSCL-QMQQMHQPAAAGFGLEMVV 292
Query: 235 INPSEMGLRRTISA----PVSAPETFIDSSCYPHLQPSSNWDSDLQNFYNVASFPSQQFT 290
N R + A PVSA + SC + ++ WD QN ++ QQ
Sbjct: 293 NNQYTPAQSRPLPAATPPPVSAGASV--ESCL-DVNGAAAWDIGSQNLFSGFDAQFQQVQ 349
Query: 291 GTLEASNLKMEM 302
NLKMEM
Sbjct: 350 SDCLLDNLKMEM 361
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/182 (57%), Positives = 123/182 (67%), Gaps = 10/182 (5%)
Query: 82 KRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCN 141
K+ D TK+ + K DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCN
Sbjct: 237 KKSEDNGDKTKSIDPYK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCN 295
Query: 142 KITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTI 201
K+TGKA MLDEIINYVQSLQRQVEFLSMKL++VN RLDFN+D L +K+ FP +N
Sbjct: 296 KVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFPSS-NNLMHH 354
Query: 202 GMSSEMTHPAAYL---HQFNSLQQQA-VSCSGLDLGIINPSEMGLRRTISAPVSAPETFI 257
++ A L H N+L+ +SC+ IINPSE R+ + + F
Sbjct: 355 QHVLQLDSSAETLLGDHHNNNLRLNPDISCN----NIINPSETSETRSFISHLPTLAHFT 410
Query: 258 DS 259
DS
Sbjct: 411 DS 412
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 107/197 (54%), Positives = 133/197 (67%), Gaps = 16/197 (8%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
Q ++AS+ K +YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+K+TGKA
Sbjct: 356 QGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 415
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMT 208
MLDEIINYVQSLQRQVEFLSMKLA VNPRLDFN++ L AK+ T+ S +M
Sbjct: 416 MLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILHSRAVPSSTLAFSPDMI 475
Query: 209 HPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISA---PVSAPETFIDSSCYPHL 265
AY FN+ Q + S G+ + S++ LRRTIS+ P+S F + + P+
Sbjct: 476 --MAY-PPFNTSQPGLIQAS--FPGMESHSDV-LRRTISSQLTPLSG--VFKEPTQLPNA 527
Query: 266 QPSSNWDSDLQNFYNVA 282
WD +L N +
Sbjct: 528 -----WDDELHNVVQMG 539
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 140/238 (58%), Gaps = 21/238 (8%)
Query: 78 ESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLV 137
E+ +K K ++K E K DYIHVRARRG+ATDSHSLAERVRREKIS+RMK LQDLV
Sbjct: 252 ENGGGKKQGKDSSSKPPEPPK-DYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLV 310
Query: 138 PGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVC-- 194
PGCNK+ GKA MLDEIINYVQSLQRQVEFLSMKLA VNP+LDF N+ NL AK+ C
Sbjct: 311 PGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLAKDMHQSCSP 370
Query: 195 --PSNFPTIGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMG-LRRTISAPVS 251
S+FP + A L N QQ GL G+ N M L P+
Sbjct: 371 LQSSHFP-------LETSGAPLPYINQPQQGNPLGCGLTNGMDNQGSMHPLDPAFCRPMG 423
Query: 252 APETFIDSSCYPHLQPSSNWDSDLQNFYNVASFPSQQ-------FTGTLEASNLKMEM 302
+ F++ Q + W DLQ+ + SQ+ + G+L+ ++KME+
Sbjct: 424 SHHPFLNGVSDAASQVGAFWQDDLQSVVQMDMGQSQEIATSSNSYNGSLQTVHMKMEL 481
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 126/296 (42%), Positives = 155/296 (52%), Gaps = 65/296 (21%)
Query: 19 LGKIVAPAAGYGFGPGFEASYAISRTSSS--PPAVVPEAVDVKGKVS--VAALNEKVSAA 74
LG P GFGP E+ ISRTSS P E + G+ + VA N++
Sbjct: 73 LGSGFGPNYNMGFGPPHES---ISRTSSCHMEPVDTMEVLLKTGEETRAVALKNKRKPEV 129
Query: 75 VGRESFKKRKADKVQ--------------NTKAS------------EVQKHDYIHVRARR 108
RE K K KV+ NT+AS E QK DYIHVRARR
Sbjct: 130 KTREEQKTEKKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARR 189
Query: 109 GQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
GQATD HSLAER RREKIS++MKYLQD+VPGCNK+TGKAGMLDEIINYVQ LQRQVEFLS
Sbjct: 190 GQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLS 249
Query: 169 MKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQAVSCS 228
MKLA +NP L+ V+++ K+ F +N S + P L Q S
Sbjct: 250 MKLAVLNPELELAVEDVSVKQ-FQAYFTNVVASKQSIMVDVPLFPLDQQGS--------- 299
Query: 229 GLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQNFYNVASF 284
LDL INP++ T I++ PS +W++ Q+ YN +S
Sbjct: 300 -LDLSAINPNQT--------------TSIEA-------PSGSWETQSQSLYNTSSL 333
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/297 (43%), Positives = 157/297 (52%), Gaps = 69/297 (23%)
Query: 19 LGKIVAPAAGYGFGPGFEASYAISRTSSSPPAVVPEAVDVKGKV--------SVAALNEK 70
LG P GFGP ISRTSS + VD G + +VA N++
Sbjct: 72 LGSDFGPNYNMGFGPNEAMDGCISRTSSCQM----DQVDTMGIMLKSSDEDRAVALKNKR 127
Query: 71 VSAA---------------VGRESFKKRKADKVQNTKAS------------EVQKHDYIH 103
S V ES K K++ + NT+AS E QK DYIH
Sbjct: 128 KSEIKTKEEEKTEKKIKVEVETESNMKGKSN-MGNTEASSDTSKEISKGASESQKLDYIH 186
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HSLAER RREKIS++MKYLQDLVPGCNK+TGKAGMLDEIINYVQSLQRQ
Sbjct: 187 VRARRGQATDRHSLAERARREKISKKMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQ 246
Query: 164 VEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQ 223
VEFLSMKLA +NP L+ V++L K+ F +N P + S P L QQ
Sbjct: 247 VEFLSMKLAVLNPELELAVEDLSVKQ-FQAYFTNLPVVVDSKP---PIMVDVPLFPLDQQ 302
Query: 224 AVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQNFYN 280
LDL +INP++ T I++ PS++W++ Q+ YN
Sbjct: 303 G----SLDLSVINPNQT--------------TSIEA-------PSASWETQSQSLYN 334
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/296 (42%), Positives = 155/296 (52%), Gaps = 65/296 (21%)
Query: 19 LGKIVAPAAGYGFGPGFEASYAISRTSSS--PPAVVPEAVDVKGKVS--VAALNEKVSAA 74
LG P GFGP E+ ISRTSS P E + G+ + VA N++
Sbjct: 73 LGSGFGPNYNMGFGPPHES---ISRTSSCHMEPVDTMEVLLKTGEETRAVALKNKRKPEV 129
Query: 75 VGRESFKKRKADKVQ--------------NTKAS------------EVQKHDYIHVRARR 108
RE K K KV+ NT+AS E QK DYIHVRARR
Sbjct: 130 KTREEQKTEKKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARR 189
Query: 109 GQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
GQATD HSLAER RREKIS++MKYLQD+VPGCNK+TGKAGMLDEIINYVQ LQRQVEFLS
Sbjct: 190 GQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLS 249
Query: 169 MKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQAVSCS 228
MKLA +NP L+ V+++ K+ F +N S + P L Q S
Sbjct: 250 MKLAVLNPELELAVEDVSVKQ-FQAYFTNVVASKQSIMVDVPLFPLDQQGS--------- 299
Query: 229 GLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQNFYNVASF 284
LDL INP++ T I++ PS +W++ Q+ YN +S
Sbjct: 300 -LDLSAINPNQT--------------TSIEA-------PSGSWETQSQSLYNTSSL 333
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 140/238 (58%), Gaps = 21/238 (8%)
Query: 78 ESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLV 137
E+ +K K ++K E K DYIHVRARRG+ATDSHSLAERVRREKIS+RMK LQDLV
Sbjct: 254 ENGGGKKQGKDSSSKPPEPPK-DYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLV 312
Query: 138 PGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVC-- 194
PGCNK+ GKA MLDEIINYVQSLQRQVEFLSMKLA VNP+LDF N+ NL AK+ C
Sbjct: 313 PGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLAKDMHQSCSP 372
Query: 195 --PSNFPTIGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMG-LRRTISAPVS 251
S+FP + A L N QQ GL G+ N M L P+
Sbjct: 373 LQSSHFP-------LETSGAPLPYINQPQQGNPLGCGLTNGMDNQGSMHPLDPAFCRPMG 425
Query: 252 APETFIDSSCYPHLQPSSNWDSDLQNFYNVASFPSQQ-------FTGTLEASNLKMEM 302
+ F++ Q + W DLQ+ + SQ+ + G+L+ ++KME+
Sbjct: 426 SHHPFLNGVSDAASQVGAFWQDDLQSVVQMDMGQSQEIATSSNSYNGSLQTVHMKMEL 483
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/211 (49%), Positives = 135/211 (63%), Gaps = 13/211 (6%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DY+HVRARRGQATDSHSLAERVRRE+IS+RMK LQDLVPGCNK+ GKA MLDEIINYVQS
Sbjct: 200 DYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQS 259
Query: 160 LQRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFN 218
LQRQVEFLSMKLA VNP LDF N+ L K+ F C + ++ S E ++ A +
Sbjct: 260 LQRQVEFLSMKLATVNP-LDFSNLPTLLQKDMFQACGPSASSV-FSLESSNSAFPFAEQG 317
Query: 219 SLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQNF 278
+ QQ S +N ++ L + +A A F D + +LQ + W+ DLQ+
Sbjct: 318 DVFQQFAQNSMESQCTLNQLDLALSQATNA---AQYAFQDGTAGANLQQRNFWEDDLQSV 374
Query: 279 YNVASFPSQQ-------FTGTLEASNLKMEM 302
+++ + SQ+ F G L+A ++KME
Sbjct: 375 FHIENGQSQENGVSAPNFHGQLQAGHMKMEF 405
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 132/203 (65%), Gaps = 19/203 (9%)
Query: 83 RKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 142
RK++ Q S+ K DYIH+RAR GQAT+SHSLAERVRREKISERMK+LQDLVPGC+K
Sbjct: 244 RKSNGKQTEDKSDAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 303
Query: 143 ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIG 202
+ GKA MLDEIINYVQSLQRQVEFLSMKL+AVNP LDFN++ + +K+ F + T G
Sbjct: 304 VIGKAVMLDEIINYVQSLQRQVEFLSMKLSAVNPALDFNIERILSKDLFQSQGTASSTFG 363
Query: 203 MSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCY 262
++ H +LH Q S I+NP++ R +APV TF +++
Sbjct: 364 FLPDIGH--QFLHPPKHSQAALHS-------IVNPAD-AFGRVTNAPVGC--TFKEAT-- 409
Query: 263 PHLQPSSNWDSDLQNFYNVASFP 285
H P +N+D + F+NV P
Sbjct: 410 -HQVP-NNFDGE---FHNVIGMP 427
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 128/202 (63%), Gaps = 15/202 (7%)
Query: 77 RESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 136
R S RK+ Q + K DYIHVRARRGQAT+SHSLAERVRREKISERMKYLQDL
Sbjct: 231 RSSVASRKSSGKQTKDNAGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDL 290
Query: 137 VPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPS 196
VPGC+K+TGKA MLDEIINYVQSLQRQVEFLSMKLA+VNP LDFN++ + +K+ F +
Sbjct: 291 VPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQSRGT 350
Query: 197 NFPT-IGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPET 255
+ G ++ HP + ++ + + I+NP++ R AP+ +
Sbjct: 351 TASSAFGFFPDIVHPRLHPPKYTQVGMPS---------IVNPTD-AFGRATHAPLGTNSS 400
Query: 256 FIDSSCYPHLQPSSNWDSDLQN 277
F + P Q +N + + Q+
Sbjct: 401 FKE----PKHQMPNNLNGEFQD 418
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/102 (83%), Positives = 91/102 (89%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
+N+K E K DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGC+K+TGKA
Sbjct: 1 ENSKPPEPPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 60
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEA 190
MLDEIINYVQSLQRQVEFLSMKLAAVNPRLD N+D L KE
Sbjct: 61 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDINLDGLLTKEV 102
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/250 (46%), Positives = 141/250 (56%), Gaps = 34/250 (13%)
Query: 69 EKVSAAVGRESFKKRKADKVQNTKASEVQ-KHDYIHVRARRGQATDSHSLAERVRREKIS 127
E+ ++A ES K+ D N K S V K DYIHVRARRGQATDSHSLAERVRREKIS
Sbjct: 89 EESNSAETAESCPKQTVD---NAKPSSVSVKQDYIHVRARRGQATDSHSLAERVRREKIS 145
Query: 128 ERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFA 187
ERMK LQDLVPGCNK+TGKA MLDEIINYVQ+LQ QVEFLSMKLAAVNP+LD NV+ +
Sbjct: 146 ERMKLLQDLVPGCNKVTGKAVMLDEIINYVQALQCQVEFLSMKLAAVNPQLDCNVEGGYL 205
Query: 188 KEAF--PVCPSNFPTIGMSSEMTHP--AAYLHQFNSLQ----QQAVSCSGLDLGIINPSE 239
P C S S+M P A Q N LQ Q + C + E
Sbjct: 206 TRDVLQPHCSS-------ISKMFAPDTTAAASQINQLQKTPLQHGLQCRA------DRQE 252
Query: 240 MGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQNFYNVA-------SFPSQQFTGT 292
+ +R + + + D + LQ S WD + QN ++ S F G
Sbjct: 253 LAIRGMMDTQFTCMNGYADPTF--QLQMSQGWDDEFQNAVDIGLDQNRSNPLKSHGFHGV 310
Query: 293 LEASNLKMEM 302
L ++K+E+
Sbjct: 311 LPTGHMKVEL 320
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 114/248 (45%), Positives = 142/248 (57%), Gaps = 25/248 (10%)
Query: 70 KVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISER 129
K AA +K K +K E K DYIHVRARRG+ATDSHSLAERVRREKIS+R
Sbjct: 247 KGKAAQSNSENGGKKQGKDSTSKPPEPPK-DYIHVRARRGEATDSHSLAERVRREKISQR 305
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFAK 188
MK LQDLVPGCNK+ GKA MLDEIINYVQSLQRQVEFLSMKLA VNP+LDF N+ NL K
Sbjct: 306 MKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLPK 365
Query: 189 EAFPVCP----SNFP--TIGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGL 242
+ C S+FP T G P YL+Q + S +G+D S L
Sbjct: 366 DIHQSCGPLQNSHFPLETSGA------PLPYLNQPHQGNPLGCSLTGMD---SQSSMHPL 416
Query: 243 RRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQNFYN--------VASFPSQQFTGTLE 294
P+++ F++ Q + W DLQ+ + +A S + G+L+
Sbjct: 417 DPAFCRPMNSQHPFLNGVSDAASQVGTFWQDDLQSVVHMDIGQSQEIAPTSSNSYNGSLQ 476
Query: 295 ASNLKMEM 302
++KME+
Sbjct: 477 TVHMKMEL 484
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 88/115 (76%), Positives = 98/115 (85%), Gaps = 1/115 (0%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
+NTK E K DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGCNK+TGKA
Sbjct: 44 ENTKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAV 102
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGM 203
MLDEIINYVQSLQRQVEFLSMKLAAVNPRL+FNV++L KE + F ++ +
Sbjct: 103 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLEFNVESLLGKEVRTLLKILFFSVSL 157
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 134/211 (63%), Gaps = 13/211 (6%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DY+HVRARRGQATDSHSLAERVRRE+IS+RMK LQDLVPGCNK+ GKA MLDEIINYVQS
Sbjct: 200 DYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQS 259
Query: 160 LQRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFN 218
LQRQVEFLSMKLA VNP LDF N+ L K+ F C + ++ S E ++ A +
Sbjct: 260 LQRQVEFLSMKLATVNP-LDFSNLPTLLQKDMFQACGPSASSV-FSLESSNSAFRFAEQG 317
Query: 219 SLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQNF 278
+ QQ S +N ++ L + +A A F D + +LQ + W+ DLQ+
Sbjct: 318 DVFQQFAQNSMESQCTLNQLDLALSQATNA---AQYAFQDGTAGANLQQRNFWEDDLQSV 374
Query: 279 YNVASFPSQQ-------FTGTLEASNLKMEM 302
+++ + SQ+ F G +A ++KME
Sbjct: 375 FHIENGQSQENGVSAPNFHGQQQAGHMKMEF 405
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 117/251 (46%), Positives = 155/251 (61%), Gaps = 36/251 (14%)
Query: 68 NEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKIS 127
++K ++ +++ K+ K Q + S+ K +YIHVRARRGQAT+SHSLAERVRREKIS
Sbjct: 118 DQKPTSTTSKDAGKQGK----QGSLGSDQPKEEYIHVRARRGQATNSHSLAERVRREKIS 173
Query: 128 ERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFA 187
ERMK+LQDLVPGC+K+TGKA MLDEIINYVQSLQRQVEFLSMKLA VNPRLD N++ L A
Sbjct: 174 ERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLA 233
Query: 188 KEAF--------PVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSE 239
K+ F V PS ++ S EM P AY S QA G+ N S+
Sbjct: 234 KDVFDPKILQLHAVPPS---SLAFSLEM--PMAYPPSHPS---QAGLIPTAFPGMNNHSD 285
Query: 240 MGLRRTISA---PVSAPETFIDSSCYPHLQPSSNWDSDLQN-----FYNVASFPSQQFTG 291
+ + RTI++ P++A F + + P++ WD +L+N + A SQ
Sbjct: 286 I-ICRTINSQLTPMTA--GFKEPAQLPNV-----WDDELRNVVQMSYETSAPHDSQDVNK 337
Query: 292 TLEASNLKMEM 302
L +LK+E+
Sbjct: 338 PLPPGHLKVEL 348
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 133/210 (63%), Gaps = 22/210 (10%)
Query: 69 EKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISE 128
E+ S A G+ S K+ K + + K DYIHVRARRGQAT+SHSLAERVRREKISE
Sbjct: 232 ERSSVASGKSSGKQIKDN-------AGSPKEDYIHVRARRGQATNSHSLAERVRREKISE 284
Query: 129 RMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAK 188
RMKYLQDLVPGC+K+TGKA MLDEIINYVQSLQRQVEFLSMKLA+VNP LDFN++ + +K
Sbjct: 285 RMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIERILSK 344
Query: 189 EAFPVCPSNFPT-IGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTIS 247
+ F + + G ++ HP + ++ + + I+NP++ R I
Sbjct: 345 DIFQCRGTTASSAFGFFPDIVHPRLHPPKYTQVGMPS---------IVNPTD-AFGRVIH 394
Query: 248 APVSAPETFIDSSCYPHLQPSSNWDSDLQN 277
AP+ F + P Q +N + + Q+
Sbjct: 395 APLGTNSAFKE----PKHQMPNNLNGEFQD 420
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 119/252 (47%), Positives = 152/252 (60%), Gaps = 12/252 (4%)
Query: 59 KGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLA 118
+GK + +E AA GR K A K + A+ QK DYIHVRARRGQATDSHSLA
Sbjct: 106 RGKQQLRDPDEAGGAAKGRPEKPKACARK-KPEAAAAGQKTDYIHVRARRGQATDSHSLA 164
Query: 119 ERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
ERVRRE+ISERM+YLQ+LVPGC+K+TGKAGMLDEIINYVQSLQ+QVEFLSMK+AA NP +
Sbjct: 165 ERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAAANPVV 224
Query: 179 DFN-VDNLFA--KEAFPVCP-SNFP--TIGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDL 232
+FN VD+LF + + P P + P T+ M P+ ++QQ +G L
Sbjct: 225 NFNIVDDLFGGRRMSQPCGPAAALPAMTLPMHHGQLDPSCLQMSNTAMQQMQQPAAGFGL 284
Query: 233 GIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQNFYNV--ASFPSQQFT 290
++ LR + P SA SC + ++ WD QN ++ A F S Q
Sbjct: 285 DMVLNHPYPLRSAAATPASASAATSVESCL-DVNGAAAWDIASQNLFSGFDAQFQSVQSD 343
Query: 291 GTLEASNLKMEM 302
L+ NLKME+
Sbjct: 344 CLLD--NLKMEL 353
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 103/191 (53%), Positives = 128/191 (67%), Gaps = 15/191 (7%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
Q+++ S+ K +YIHVRARRGQAT+SHSLAERVRREKISERM+ LQDLVPGC+K+TGKA
Sbjct: 326 QDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAV 385
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAF--PVCPSNFPTIGMSSE 206
MLDEIINYVQSLQRQVEFLSMKLA VNPRLDFN++ L KE PS F G +
Sbjct: 386 MLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLTKEFIQSKAGPSLF---GFPPD 442
Query: 207 MTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQ 266
M P YL Q +S C L + S LRRTI++ ++ + + P +Q
Sbjct: 443 M--PVPYLPQHSSHHGLIPPC----LPTMGSSPDLLRRTINSQLT---SLVGGFKEP-VQ 492
Query: 267 PSSNWDSDLQN 277
+ W+++L N
Sbjct: 493 LPNRWENELHN 503
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/162 (60%), Positives = 111/162 (68%), Gaps = 7/162 (4%)
Query: 90 NTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 149
N K E K DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGCNK+TGKA M
Sbjct: 250 NPKPPEAPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 308
Query: 150 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAF----PVCPSNFPTIGMSS 205
LDEIINYVQSLQRQVEFLSMKLA VNPR+DFN++ L +KE F + + +P SS
Sbjct: 309 LDEIINYVQSLQRQVEFLSMKLATVNPRMDFNMEALLSKEIFQSRGSLPQAMYPLD--SS 366
Query: 206 EMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTIS 247
+ P Y Q Q + +NP +RRT S
Sbjct: 367 ALAFPYGYQPQQGPSLQNGIPNGTETPFSVNPLNSAIRRTSS 408
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 88/123 (71%), Positives = 100/123 (81%), Gaps = 5/123 (4%)
Query: 95 EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 154
E QK DYIH+RARRGQAT+SHSLAER+RREKISERMK LQDLVPGC+K+TGKA MLDEII
Sbjct: 248 ESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEII 307
Query: 155 NYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEA--FPVCPSNFPTIGMSSEMTHPAA 212
NYVQSLQRQVEFLSMKLA VNPRLD N++ L +K+ FP PS+ ++G EM HP
Sbjct: 308 NYVQSLQRQVEFLSMKLATVNPRLD-NIEGLLSKDLLRFPGAPSS--SLGFPPEMMHPPQ 364
Query: 213 YLH 215
L
Sbjct: 365 LLQ 367
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/158 (62%), Positives = 108/158 (68%), Gaps = 6/158 (3%)
Query: 37 ASYAISRTSSSPPAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQN---TKA 93
A A S+ + P + VD + NEK V E K D QN TK
Sbjct: 283 APKAKSKEAPQPNSAKDAEVDDNSNAKRSKGNEKND--VKAEEEHKGNGDDKQNKASTKP 340
Query: 94 SEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEI 153
E K DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNK+TGKA MLDEI
Sbjct: 341 PEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEI 399
Query: 154 INYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAF 191
INYVQSLQRQVEFLSMKLA+VN RLD N+D L +K+ F
Sbjct: 400 INYVQSLQRQVEFLSMKLASVNTRLDINLDTLMSKDIF 437
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/125 (68%), Positives = 100/125 (80%), Gaps = 1/125 (0%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
K DYIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+K+TGKA MLDEIINYV
Sbjct: 70 KEDYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 129
Query: 158 QSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSE-MTHPAAYLHQ 216
QSLQRQVEFLSMKLAAVNP LDFN++ L +K+ + + IG S + + HP + Q
Sbjct: 130 QSLQRQVEFLSMKLAAVNPTLDFNIEGLLSKDLLQLRGGSSSAIGFSPQRILHPQLHPSQ 189
Query: 217 FNSLQ 221
+Q
Sbjct: 190 QGLIQ 194
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/111 (76%), Positives = 95/111 (85%), Gaps = 1/111 (0%)
Query: 82 KRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCN 141
K+ + TK+ + K DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCN
Sbjct: 237 KKSEENGDKTKSIDPYK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCN 295
Query: 142 KITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFP 192
K+TGKA MLDEIINYVQSLQRQVEFLSMKL++VN RLDFN+D L +K+ FP
Sbjct: 296 KVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFP 346
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/111 (76%), Positives = 95/111 (85%), Gaps = 1/111 (0%)
Query: 82 KRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCN 141
K+ + TK+ + K DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCN
Sbjct: 237 KKSEENGDKTKSIDPYK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCN 295
Query: 142 KITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFP 192
K+TGKA MLDEIINYVQSLQRQVEFLSMKL++VN RLDFN+D L +K+ FP
Sbjct: 296 KVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFP 346
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/93 (87%), Positives = 87/93 (93%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNK+TGKA MLDEIINYVQS
Sbjct: 248 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 307
Query: 160 LQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFP 192
LQRQVEFLSMKL++VN RLDFN+D L +K+ FP
Sbjct: 308 LQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFP 340
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 121/181 (66%), Gaps = 15/181 (8%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
K DYIHVRARRGQAT+SHSLAERVRREKISERMKYLQDLVPGC+K+TGKA MLDEIINYV
Sbjct: 254 KEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYV 313
Query: 158 QSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPT-IGMSSEMTHPAAYLHQ 216
QSLQRQVEFLSMKLA+VNP LDFN++ + +K+ F + + G ++ HP + +
Sbjct: 314 QSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQCRGTTASSAFGFFPDIVHPRLHPPK 373
Query: 217 FNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQ 276
+ + + I+NP++ R I AP+ F + P Q +N + + Q
Sbjct: 374 YTQVGMPS---------IVNPTD-AFGRVIHAPLGTNSAFKE----PKHQMPNNLNGEFQ 419
Query: 277 N 277
+
Sbjct: 420 D 420
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 121/181 (66%), Gaps = 15/181 (8%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
K DYIHVRARRGQAT+SHSLAERVRREKISERMKYLQDLVPGC+K+TGKA MLDEIINYV
Sbjct: 311 KEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYV 370
Query: 158 QSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPT-IGMSSEMTHPAAYLHQ 216
QSLQRQVEFLSMKLA+VNP LDFN++ + +K+ F + + G ++ HP + +
Sbjct: 371 QSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQCRGTTASSAFGFFPDIVHPRLHPPK 430
Query: 217 FNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQ 276
+ + + I+NP++ R I AP+ F + P Q +N + + Q
Sbjct: 431 YTQVGMPS---------IVNPTDA-FGRVIHAPLGTNSAFKE----PKHQMPNNLNGEFQ 476
Query: 277 N 277
+
Sbjct: 477 D 477
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 121/181 (66%), Gaps = 15/181 (8%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
K DYIHVRARRGQAT+SHSLAERVRREKISERMKYLQDLVPGC+K+TGKA MLDEIINYV
Sbjct: 362 KEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYV 421
Query: 158 QSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPT-IGMSSEMTHPAAYLHQ 216
QSLQRQVEFLSMKLA+VNP LDFN++ + +K+ F + + G ++ HP + +
Sbjct: 422 QSLQRQVEFLSMKLASVNPTLDFNIERILSKDIFQCRGTTASSAFGFFPDIVHPRLHPPK 481
Query: 217 FNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQ 276
+ + + I+NP++ R I AP+ F + P Q +N + + Q
Sbjct: 482 YTQVGMPS---------IVNPTD-AFGRVIHAPLGTNSAFKE----PKHQMPNNLNGEFQ 527
Query: 277 N 277
+
Sbjct: 528 D 528
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 134/210 (63%), Gaps = 20/210 (9%)
Query: 83 RKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 142
RK++ Q S+ K DYIH+RAR GQAT+SHSLAERVRREKISERMK+LQDLVPGC+K
Sbjct: 242 RKSNGKQTEDNSDAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 301
Query: 143 ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPV--CPSNFPT 200
+ GKA MLDEIINYVQSLQRQVEFLSMKL+ VNP LDFN++ + +K+ F P++
Sbjct: 302 VIGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPALDFNIERILSKDFFQSQGTPAS-SA 360
Query: 201 IGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSS 260
G E +H +LHQ Q A+ GI+NP++ R +A V + +F +
Sbjct: 361 FGFLPENSH--HFLHQ-PKHSQAALH------GIVNPTD-AFGRVTNAQVGSSSSFKE-- 408
Query: 261 CYPHLQPSSNWDSDLQNFYNVASFPSQQFT 290
P Q +N+D + F+NV P F
Sbjct: 409 --PVHQMPNNFDGE---FHNVTGMPFSLFN 433
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DY+HVRARRGQATDSHSLAERVRRE+IS+RMK LQDLVPGCNK+ GKA MLDEIINYVQS
Sbjct: 200 DYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQS 259
Query: 160 LQRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFN 218
LQRQVEFLSMKLA VNP LDF N+ L K+ C + ++ S E ++ A +
Sbjct: 260 LQRQVEFLSMKLATVNP-LDFSNLPTLLQKDMLQACGPSASSV-FSLESSNSAFRFAEQG 317
Query: 219 SLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQNF 278
+ QQ S +N ++ L + +A A F D + +LQ + W+ DLQ+
Sbjct: 318 DVFQQFAQNSMESQCTLNQLDLALSQATNA---AQYAFQDGTAGANLQQRNFWEDDLQSV 374
Query: 279 YNVASFPSQQ-------FTGTLEASNLKMEM 302
+++ + SQ+ F G +A ++KME
Sbjct: 375 FHIENGQSQENGVSAPNFHGQQQAGHMKMEF 405
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 83/139 (59%), Positives = 105/139 (75%)
Query: 63 SVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVR 122
+V N++ + RE + K +N + +K Y+HVRARRGQATDSHSLAER R
Sbjct: 160 TVENTNQRSAKRKEREKKGRGSTKKSKNESNEDAEKLPYVHVRARRGQATDSHSLAERAR 219
Query: 123 REKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNV 182
REKI+ RMK LQ+LVPGCNKI+G A +LDEIIN+VQSLQRQVEFLSM+LAAVNPR+DFN+
Sbjct: 220 REKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRVDFNI 279
Query: 183 DNLFAKEAFPVCPSNFPTI 201
+++ A E P+ SNFPT+
Sbjct: 280 ESILATENEPILESNFPTM 298
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 126/191 (65%), Gaps = 15/191 (7%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
Q+++ S+ K +YIHVRARRGQAT+SHSLAERVRREKISERM+ LQDLVPGC+K+TGKA
Sbjct: 326 QDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAV 385
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAF--PVCPSNFPTIGMSSE 206
MLDEIINYVQSLQRQVEFLSMKLA VNPRLDFN++ L KE PS F G +
Sbjct: 386 MLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLTKEFIQSKAGPSLF---GFPPD 442
Query: 207 MTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQ 266
M P YL Q +S C L + S LRR I++ ++ + + P +Q
Sbjct: 443 M--PVPYLPQHSSHHGLIPPC----LPTMGSSPDLLRRAINSQLT---SLVGGFKEP-VQ 492
Query: 267 PSSNWDSDLQN 277
+ W ++L N
Sbjct: 493 LPNRWGNELHN 503
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 118/178 (66%), Gaps = 12/178 (6%)
Query: 49 PAVVPEAVDVK---GKVSVAALNEKVSAAVGRESFK-----KRKADKVQNTKASEVQKHD 100
P+ P A DVK K A K A G + K +K +K NTK E K D
Sbjct: 285 PSSSPSASDVKVAAEKDESTAKRSKSDEANGHDKAKAEQNGNQKQNK-DNTKLPEPPK-D 342
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
YIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGCNK+TGKA MLDEIINYVQSL
Sbjct: 343 YIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 402
Query: 161 QRQVEFLSMKLAAVNPRLDFNVDNLFAK--EAFPVCPSNFPTIGMSSEMTHPAAYLHQ 216
QRQVEFLSMKLA VNPR+D N++ L ++F P + + S+ + P +Y Q
Sbjct: 403 QRQVEFLSMKLATVNPRMDVNMEALSKDVFQSFGSLPHSLYPLDSSAALALPYSYQSQ 460
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 107/234 (45%), Positives = 136/234 (58%), Gaps = 24/234 (10%)
Query: 82 KRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCN 141
+++ K TK DYIHVRARRG+ATDSHSLAERVRREKIS+RMK LQDLVPGCN
Sbjct: 258 RKQQGKESATKPPAEAPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCN 317
Query: 142 KITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN-VDNLFAKEAF--PVCPSNF 198
K+ GKA MLDEIINYVQSLQRQVEFLSMKLA VNP+LDFN + NL + P P +F
Sbjct: 318 KVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNSLPNLLLPKDIHQPCGPPHF 377
Query: 199 P--TIGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETF 256
P T G P YL Q + C G ++P + R P++ F
Sbjct: 378 PLETSGA------PLPYLSQPHHGSPLGC-CMDTQGGSMHPLDAAFCR----PMNPQHPF 426
Query: 257 IDSSCYPHLQPSSNWDSDLQNFYN--------VASFPSQQFTGTLEASNLKMEM 302
++ + Q + W DLQ+ + +A S + G+L+ ++KME+
Sbjct: 427 LNGASDAASQVGTFWQDDLQSVVHMDIGQSQEIAPTSSNSYNGSLQTVHMKMEL 480
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 124/296 (41%), Positives = 152/296 (51%), Gaps = 65/296 (21%)
Query: 19 LGKIVAPAAGYGFGPGFEASYAISRTSSS--PPAVVPEAVDVKGKVS--VAALNEKVSAA 74
LG P GFGP E+ ISRTSS P E + G+ + VA N++
Sbjct: 56 LGSGFGPNYNMGFGPPHES---ISRTSSCHMEPVDTMEVLLKTGEETRAVALKNKRKPEV 112
Query: 75 VGRESFKKRKADKVQ--------------NTKAS------------EVQKHDYIHVRARR 108
RE K K KV+ NT+AS E QK DYIHVRARR
Sbjct: 113 KTREEQKTEKKIKVEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARR 172
Query: 109 GQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
GQATD HSLAER RREKIS++MKYLQD+VPGCNK+TGKAGMLDEIINYVQ LQRQVEFLS
Sbjct: 173 GQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLS 232
Query: 169 MKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQAVSCS 228
MKLA +NP L+ V+++ K+ F +N S + P L Q S
Sbjct: 233 MKLAVLNPELELAVEDVSVKQ-FQAYFTNVVASKQSIMVDVPLFPLDQQGS--------- 282
Query: 229 GLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQNFYNVASF 284
LD INP++ +I AP + W++ Q+ YN +S
Sbjct: 283 -LDSFAINPNQT---TSIEAPFGS------------------WETQSQSLYNTSSL 316
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 86/126 (68%), Positives = 103/126 (81%), Gaps = 3/126 (2%)
Query: 69 EKVSAAVGR-ESFKKRKADKVQNTKASEVQK--HDYIHVRARRGQATDSHSLAERVRREK 125
+++ A G+ E+ A++ QN +S+ + DYIHVRARRGQATDSHSLAERVRREK
Sbjct: 315 KEIDGAKGKAEAKSSGDANQKQNNDSSKPPEPPKDYIHVRARRGQATDSHSLAERVRREK 374
Query: 126 ISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNL 185
IS+RMK+LQDLVPGCNK+TGKA MLDEIINYVQSLQRQVEFLSMKLA VNPR+DFN++ L
Sbjct: 375 ISKRMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNMETL 434
Query: 186 FAKEAF 191
K+ F
Sbjct: 435 VPKDIF 440
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/119 (70%), Positives = 97/119 (81%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
Q ++ S+ K +YIHVRARRGQAT+SHSLAERVRREKISERMK+LQ+LVPGC+K+TGKA
Sbjct: 354 QASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV 413
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEM 207
MLDEIINYVQSLQRQVEFLSMKLA VNPRLD N+D + AK+ T+G SS M
Sbjct: 414 MLDEIINYVQSLQRQVEFLSMKLATVNPRLDINIDGVVAKDILQSRVGPLSTLGFSSHM 472
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 84/119 (70%), Positives = 97/119 (81%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
Q ++ S+ K +YIHVRARRGQAT+SHSLAERVRREKISERMK+LQ+LVPGC+K+TGKA
Sbjct: 310 QASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV 369
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEM 207
MLDEIINYVQSLQRQVEFLSMKLA VNPRLD N+D + AK+ T+G SS M
Sbjct: 370 MLDEIINYVQSLQRQVEFLSMKLATVNPRLDINIDGVVAKDILQSRVGPLSTLGFSSHM 428
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/94 (84%), Positives = 88/94 (93%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
K +YIHVRARRGQAT+SHSLAERVRREKISERMKYLQDLVPGC+K+TGKA MLDEIINYV
Sbjct: 243 KEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYV 302
Query: 158 QSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAF 191
QSLQRQVEFLSMKLA+VNP LDFN+D + +K+ F
Sbjct: 303 QSLQRQVEFLSMKLASVNPTLDFNIDRILSKDIF 336
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/116 (73%), Positives = 95/116 (81%), Gaps = 1/116 (0%)
Query: 76 GRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
G S + N+K E K DYIHVRARRGQATDSHSLAERVRREKISERMK LQD
Sbjct: 359 GNNSNANDEKQNKSNSKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQD 417
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAF 191
LVPGCNK+TGKA MLDEIINYVQSLQRQVEFLSMKLA+VN RLDF++++L +K+ F
Sbjct: 418 LVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFSIESLISKDIF 473
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/102 (81%), Positives = 92/102 (90%), Gaps = 1/102 (0%)
Query: 90 NTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 149
N+K E K DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNK+TGKA M
Sbjct: 372 NSKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 430
Query: 150 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAF 191
LDEIINYVQSLQRQVEFLSMKLA+VN RLDF++++L +K+ F
Sbjct: 431 LDEIINYVQSLQRQVEFLSMKLASVNTRLDFSIESLISKDIF 472
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/97 (82%), Positives = 88/97 (90%), Gaps = 1/97 (1%)
Query: 95 EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 154
++ K DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGC+KITGKA MLDEII
Sbjct: 60 DLSKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLDEII 119
Query: 155 NYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAF 191
NYVQSLQRQ+EFLSMKLAAVNPRLD++ D L K+
Sbjct: 120 NYVQSLQRQIEFLSMKLAAVNPRLDYSYD-LLGKDML 155
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/176 (53%), Positives = 119/176 (67%), Gaps = 11/176 (6%)
Query: 31 FGPGFEASYA-ISRTSSSPPAVVP-----EAVDVKGKVSVAALNEK-----VSAAVGRES 79
FGP ++ + ISRTSS V A+ ++ K EK + A E
Sbjct: 57 FGPDYDTTDGCISRTSSFHMEPVKNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEP 116
Query: 80 FKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPG 139
K K++ +SE+QK DYIHVRARRG+ATD HSLAER RREKIS++MK LQD+VPG
Sbjct: 117 SMKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPG 176
Query: 140 CNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCP 195
CNK+TGKAGMLDEIINYVQSLQ+QVEFLSMKL+ +NP L+ ++D+L AK+A+ P
Sbjct: 177 CNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQAYFTGP 232
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/101 (80%), Positives = 90/101 (89%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
+N + S + K DYIHVRARRGQATDSHSLAER RREKIS++MK LQDLVPGCNKITG+AG
Sbjct: 187 ENQQTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKSLQDLVPGCNKITGRAG 246
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
MLDEIINYVQSLQRQVEFLSMKLAA+NPR +FN+DN KE
Sbjct: 247 MLDEIINYVQSLQRQVEFLSMKLAALNPRPEFNIDNFSGKE 287
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 126/189 (66%), Gaps = 17/189 (8%)
Query: 60 GKVSVAALNEKVSAAVGR----ESFKKRKADKVQNT---------KASEVQKHDYIHVRA 106
G S N K +G+ E K +K ++ N+ +AS+ K YIH+RA
Sbjct: 111 GVTSSKGFNSKKRKRIGKDCEGEEDKMQKDEQSSNSNVNKTNSEKQASDSLKDGYIHMRA 170
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
RRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+K+TGKA MLDEIINYVQSLQ Q+EF
Sbjct: 171 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEF 230
Query: 167 LSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTH-PAAYLHQFNSLQQQAV 225
LSMKL+AVNP LDFN+++L AK+A S+ PT + M + P +YL Q ++
Sbjct: 231 LSMKLSAVNPVLDFNLESLLAKDAL---QSSAPTFPQNMSMLYPPLSYLSQTGFMEPNRS 287
Query: 226 SCSGLDLGI 234
S S L+ G+
Sbjct: 288 SMSLLNGGL 296
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 114/180 (63%), Gaps = 35/180 (19%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DY+HVRARRG+ATDSHSLAER RREKISERMKYLQ+LVPGCNKI GKAGMLDEIINYVQS
Sbjct: 2 DYVHVRARRGKATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQS 61
Query: 160 LQRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFN 218
LQ+QVEFLSMK+AA+N R+DF NVD+L AK+ FP N ++Y Q
Sbjct: 62 LQQQVEFLSMKVAALNHRVDFINVDDLLAKQMFPTITDN------------RSSYDTQ-- 107
Query: 219 SLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQNF 278
LGI+ S + + +T P + S H + SS W +LQ F
Sbjct: 108 -------------LGIMGSSSLTIPQT-------PLINSNLSSITHFEVSSTWGGELQRF 147
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 123/188 (65%), Gaps = 15/188 (7%)
Query: 60 GKVSVAALNEKVSAAVGR----ESFKKRK--------ADKVQNTKA-SEVQKHDYIHVRA 106
G+ S + K +G+ E KK+K A+K + K S+ K YIH+RA
Sbjct: 115 GQTSSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPTSNANKTNSEKQPSDSLKDGYIHMRA 174
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
RRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+K+TGKA MLDEIINYVQSLQ Q+EF
Sbjct: 175 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEF 234
Query: 167 LSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQAVS 226
LSMKL+AVNP LDFN+++L AK+A FP S + P +YL Q +Q S
Sbjct: 235 LSMKLSAVNPVLDFNLESLLAKDALQSSAPTFPH--NMSMLYPPVSYLSQTGFMQPNISS 292
Query: 227 CSGLDLGI 234
S L G+
Sbjct: 293 MSLLSGGL 300
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/263 (42%), Positives = 148/263 (56%), Gaps = 42/263 (15%)
Query: 31 FGPGFEASYA-ISRTSSSPPAVVP-----EAVDVKGKVSVAALNEK-----VSAAVGRES 79
FGP ++ + ISRTSS V A+ ++ K EK + A ES
Sbjct: 57 FGPDYDTTDGCISRTSSFQMEPVKNSGHNRAISLQNKRKPEGKTEKREKKKIKAEDETES 116
Query: 80 FKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPG 139
K K + +SE+QK DYIHVRARRG+ATD HSLAER RREKIS++MK LQD+VPG
Sbjct: 117 SMKGKTNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPG 176
Query: 140 CNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFP 199
CNK+TGKAGMLDEIINYVQSLQ+QVEFLSMKL+ +NP L+ ++D+L AK+ F + P
Sbjct: 177 CNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQ-FQAYFTGLP 235
Query: 200 TIGMSSEMTHPAAYLHQFNS--LQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFI 257
E + + F S L QQ +D ++N T++ + + +
Sbjct: 236 ------EADSKQSIMADFRSFPLHQQG----SIDYSVLNG-------TVTISLCSKD--- 275
Query: 258 DSSCYPHLQPSSNWDSDLQNFYN 280
Q SS+W++ Q YN
Sbjct: 276 --------QTSSSWETHSQCLYN 290
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 123/188 (65%), Gaps = 15/188 (7%)
Query: 60 GKVSVAALNEKVSAAVGR----ESFKKRK--------ADKVQNTKA-SEVQKHDYIHVRA 106
G+ S + K +G+ E KK+K A+K + K S+ K YIH+RA
Sbjct: 166 GQTSSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPTSNANKTNSEKQPSDSLKDGYIHMRA 225
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
RRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+K+TGKA MLDEIINYVQSLQ Q+EF
Sbjct: 226 RRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEF 285
Query: 167 LSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQAVS 226
LSMKL+AVNP LDFN+++L AK+A FP S + P +YL Q +Q S
Sbjct: 286 LSMKLSAVNPVLDFNLESLLAKDALQSSAPTFPH--NMSMLYPPVSYLSQTGFMQPNISS 343
Query: 227 CSGLDLGI 234
S L G+
Sbjct: 344 MSLLSGGL 351
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 128/219 (58%), Gaps = 20/219 (9%)
Query: 97 QKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 156
QK DYIHVRARRGQATDSHSLAERVRRE+ISERM+YLQ+LVPGC+K+TGKAGMLDEIINY
Sbjct: 139 QKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINY 198
Query: 157 VQSLQRQVEFLSMKLAAVNPRLDFN-VDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLH 215
VQSLQ+QVEFLSMK+AA NP + F+ V++LF ++ C G ++ P+
Sbjct: 199 VQSLQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQAC-------GPAAGQLEPSCLQM 251
Query: 216 QFNSLQQQAVSCSGLDLGIINPSEMGLRR-----TISAPVSAPETFIDSSCYPHLQPSSN 270
+ +QQ + P +M L S PVSA + ++ ++P N
Sbjct: 252 SMSPMQQVVHPSAAAGSTGFGPLDMVLSNLYAPAAASCPVSAAPSVSVAAGPSTIEPCLN 311
Query: 271 -------WDSDLQNFYNVASFPSQQFTGTLEASNLKMEM 302
WD QN ++ Q NLKMEM
Sbjct: 312 VNGTAAAWDIGSQNLFSGFDAQFQSVESGCLLDNLKMEM 350
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 82/102 (80%), Positives = 91/102 (89%), Gaps = 1/102 (0%)
Query: 90 NTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 149
N+K E K DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNK+TGKA M
Sbjct: 326 NSKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 384
Query: 150 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAF 191
LDEIINYVQSLQRQVEFLSMKLA+VN R+D +++NL +K+ F
Sbjct: 385 LDEIINYVQSLQRQVEFLSMKLASVNTRMDLSIENLISKDVF 426
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 80/121 (66%), Positives = 98/121 (80%)
Query: 83 RKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 142
+K N + E +K Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ+LVPGCNK
Sbjct: 176 KKCKNASNETSEEAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNK 235
Query: 143 ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIG 202
I+G A +LDEII++VQSLQRQVEFLSM+LAAVNPR+DFN+D+L A E+ + SNFP++
Sbjct: 236 ISGTALVLDEIISHVQSLQRQVEFLSMRLAAVNPRIDFNLDSLLAPESGSLVDSNFPSMV 295
Query: 203 M 203
M
Sbjct: 296 M 296
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 115/245 (46%), Positives = 143/245 (58%), Gaps = 41/245 (16%)
Query: 78 ESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLV 137
E ++RK K +N K E K DY+HVRARRGQATDSHSLAERVRRE+IS+RMK+LQDLV
Sbjct: 161 EDGEQRKG-KGKNAKPVEPPK-DYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDLV 218
Query: 138 PGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSN 197
PGCNK+ GKA MLDEIINYVQSLQRQVEFLSMKLA VNP LDF SN
Sbjct: 219 PGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNP-LDF---------------SN 262
Query: 198 FPTIGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIIN----PSEMGLRRTIS------ 247
PT+ + +M P+A A S D G + P+ M + T++
Sbjct: 263 LPTL-LHKDMYGPSASSVFSLESSSSAFPFS--DQGDVFQSFLPNSMESQCTLNQLDLAL 319
Query: 248 --APVSAPETFIDSSCYPHLQPSSN-WDSDLQNFYNVASFPSQQ-------FTGTLEASN 297
A +A F D++ +LQ N W+ DLQ+ ++V + SQ F G L+A
Sbjct: 320 SQATNAAQYGFQDATASTNLQQQRNFWEDDLQSVFHVDNRQSQDNGVSAESFHGDLQAGQ 379
Query: 298 LKMEM 302
+KME
Sbjct: 380 MKMEF 384
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 81/115 (70%), Positives = 95/115 (82%)
Query: 77 RESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 136
R S K+ + Q + K +YIHVRARRGQAT+SHSLAERVRREKISERMKYLQDL
Sbjct: 226 RSSVAPGKSSRKQAKDNAGSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQDL 285
Query: 137 VPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAF 191
VPGC+K+TGKA MLDEIINYVQSLQRQVEFLSMKLA+VNP LD N++++ +K+ F
Sbjct: 286 VPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDLNIESILSKDIF 340
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/88 (88%), Positives = 83/88 (94%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
K DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGC+K+TGKA MLDEIINYV
Sbjct: 67 KQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 126
Query: 158 QSLQRQVEFLSMKLAAVNPRLDFNVDNL 185
QSLQRQ+EFLSMKLAAVNPRLD+ D L
Sbjct: 127 QSLQRQIEFLSMKLAAVNPRLDYGFDVL 154
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/115 (70%), Positives = 93/115 (80%)
Query: 77 RESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 136
R S K+ Q + K +YIHVRARRGQAT+SHSLAERVRREKISERMKYLQ+L
Sbjct: 232 RSSVASGKSSGKQTKDNAGSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQNL 291
Query: 137 VPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAF 191
VPGC K+TGKA MLDEIINYVQSLQRQVEFLSMKLA+VNP LDFN++ + +K+ F
Sbjct: 292 VPGCTKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDFNIERILSKDIF 346
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 148/247 (59%), Gaps = 35/247 (14%)
Query: 60 GKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAE 119
G+ S + +++ + AV + KA +E + DY+H+RA+RGQAT++HSLAE
Sbjct: 80 GEGSSSMHSQEGTGAVSKREVNSEKAGD------AESNREDYVHIRAKRGQATNNHSLAE 133
Query: 120 RVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLD 179
R RREKI+ERMK+LQDLVPGCNKITGKA MLDEIINYVQSLQRQVEFLSMKL+AV+P L+
Sbjct: 134 RFRREKINERMKHLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSAVSPELN 193
Query: 180 FNVDNLFAKEAFPVCP----SNFPTIGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGII 235
++D F +CP S FP G HP Y QQ +S L
Sbjct: 194 CDLD--FQD---ILCPQDARSAFPGYGPRLSNVHPNLY-----RASQQGLSRPELYGSSP 243
Query: 236 NPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQNFYNVASFPSQQFTGTLEA 295
NP+ + L RT A +SA +P Q S WD +L+N +V FPS T +LE
Sbjct: 244 NPANVHLART--AQLSA---------FP--QRSVVWDEELRNIGSVV-FPSDAGTSSLEN 289
Query: 296 SN-LKME 301
S+ +K+E
Sbjct: 290 SDPMKVE 296
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 111/159 (69%), Gaps = 7/159 (4%)
Query: 52 VPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNT------KASEVQKHDYIHVR 105
+PEA K +V E +S KK K D+ + T ++ E K +YIH+R
Sbjct: 97 LPEAESQWNKKAVEEFQEDPQRG-NDQSQKKHKNDQSKETVNKESSQSEEAPKENYIHMR 155
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
ARRGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNKITGKA MLDEIINYVQSLQ+QVE
Sbjct: 156 ARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 215
Query: 166 FLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMS 204
FLSMKLA VNP ++ ++D + AK+ N PT+G++
Sbjct: 216 FLSMKLATVNPEINIDIDRILAKDLLQSRDRNTPTLGLN 254
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 111/159 (69%), Gaps = 7/159 (4%)
Query: 52 VPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNT------KASEVQKHDYIHVR 105
+PEA K +V E +S KK K D+ + T ++ E K +YIH+R
Sbjct: 147 LPEAESQWNKKAVEEFQEDPQRG-SDQSQKKHKNDQSKETVNKESSQSEEAPKENYIHMR 205
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
ARRGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNKITGKA MLDEIINYVQSLQ+QVE
Sbjct: 206 ARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 265
Query: 166 FLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMS 204
FLSMKLA VNP ++ ++D + AK+ N PT+G++
Sbjct: 266 FLSMKLATVNPEINIDIDRILAKDLLQSRDRNTPTLGLN 304
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 111/159 (69%), Gaps = 7/159 (4%)
Query: 52 VPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNT------KASEVQKHDYIHVR 105
+PEA K +V E +S KK K D+ + T ++ E K +YIH+R
Sbjct: 149 LPEAESQWNKKAVEEFQEDPQRG-NDQSQKKHKNDQSKETVNKESSQSEEAPKENYIHMR 207
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
ARRGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNKITGKA MLDEIINYVQSLQ+QVE
Sbjct: 208 ARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 267
Query: 166 FLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMS 204
FLSMKLA VNP ++ ++D + AK+ N PT+G++
Sbjct: 268 FLSMKLATVNPEINIDIDRILAKDLLQSRDRNTPTLGLN 306
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/107 (79%), Positives = 91/107 (85%), Gaps = 2/107 (1%)
Query: 86 DKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITG 145
+K NTK E K DYIHVRARRGQATDSHSLAERVRREKI ERMK LQDLVPGCNK+TG
Sbjct: 284 NKSNNTKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTG 342
Query: 146 KAGMLDEIINYVQSLQRQVEFLSMKLAAVN-PRLDFNVDNLFAKEAF 191
KA MLDEIINYVQSLQRQVEFLSMKL++VN RLDFNVD L +K+
Sbjct: 343 KALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVM 389
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/114 (70%), Positives = 98/114 (85%), Gaps = 2/114 (1%)
Query: 76 GRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
G++S K+ K + N+++ E K ++IHVRARRGQAT+SHSLAERVRREKISERM+ LQ+
Sbjct: 243 GKQSVKQAKDNN--NSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQE 300
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
LVPGCNKITGKA MLDEIINYVQSLQ+QVEFLSMKLA VNP L+F+VD + +K+
Sbjct: 301 LVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVDRILSKD 354
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/232 (47%), Positives = 133/232 (57%), Gaps = 28/232 (12%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
+N + + K DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC+K+TGKA
Sbjct: 426 ENNSSKDHAKQDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAV 485
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNP-----RLDFNVDNLFAKEAFPVCPSNFPTIGM 203
MLDEIINYVQSLQRQVE LSMKLA+VNP R+D N + K+ S ++G
Sbjct: 486 MLDEIINYVQSLQRQVENLSMKLASVNPGPSSTRIDHNFETTMNKDMLQSQMSG--SLGG 543
Query: 204 SSEMT----------HPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMG-LRRTISAPVSA 252
S T P H N C GLD + S G LRR+ SAP+
Sbjct: 544 SESTTTFGMMQQHQHQPQPQGHMMNG------HC-GLDFRAMGTSMDGYLRRSNSAPIRV 596
Query: 253 PE--TFIDSSCYPHLQPSSNWDSDLQNFYNVASFPSQQFTGTLEASNLKMEM 302
T +D S + S WD +LQ+ N F Q G+ +L+ ++
Sbjct: 597 QSGITSLD-SFGDDVSQSIGWDGELQSIVNQMGFSFQGRYGSSPLDSLQCQL 647
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/107 (79%), Positives = 91/107 (85%), Gaps = 2/107 (1%)
Query: 86 DKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITG 145
+K NTK E K DYIHVRARRGQATDSHSLAERVRREKI ERMK LQDLVPGCNK+TG
Sbjct: 284 NKSNNTKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTG 342
Query: 146 KAGMLDEIINYVQSLQRQVEFLSMKLAAVN-PRLDFNVDNLFAKEAF 191
KA MLDEIINYVQSLQRQVEFLSMKL++VN RLDFNVD L +K+
Sbjct: 343 KALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVM 389
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/243 (45%), Positives = 135/243 (55%), Gaps = 49/243 (20%)
Query: 87 KVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGK 146
K +N K E K DY+HVRARRGQATDSHSLAERVRRE+IS+RMK LQDLVPGCNK+ GK
Sbjct: 177 KGKNAKLVEPPK-DYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGK 235
Query: 147 AGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVC-PS-------- 196
A MLDEIINYVQSLQRQVEFLSMKLA VNP LDF N+ L K+ F C PS
Sbjct: 236 ALMLDEIINYVQSLQRQVEFLSMKLATVNP-LDFSNLPTLLQKDMFQACGPSASSVFSLE 294
Query: 197 ----NFPTIGMSSEMTHPAAYLHQF--NSLQQQAVSCSGLDLGIINPSEMGLRRTISAPV 250
FP + F N L+ Q C +NP ++ L +
Sbjct: 295 SSSSGFP-------FSDHGDVFQSFVPNGLENQ---CG------LNPLDLALSHATTGQY 338
Query: 251 SAPETFIDSSC-YPHLQPSSNWDSDLQNFYNV----------ASFPSQQFTGTLEASNLK 299
F D + +LQ S W+ DLQ+ +++ S +Q F G L+ ++K
Sbjct: 339 G----FQDGTAGTTNLQQRSYWEEDLQSVFHIDNNGQSQENGVSVSAQSFHGQLQEGHMK 394
Query: 300 MEM 302
ME
Sbjct: 395 MEF 397
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/200 (52%), Positives = 130/200 (65%), Gaps = 22/200 (11%)
Query: 87 KVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGK 146
K + + +E DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVP CNK+TGK
Sbjct: 15 KGKEKEVAEDPHKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPSCNKVTGK 74
Query: 147 AGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFP-TIGMSS 205
A MLDEIINYVQSLQRQVEFLSMKL+ VNP+++F+VDN K+ C + P T ++
Sbjct: 75 AVMLDEIINYVQSLQRQVEFLSMKLSTVNPQMEFDVDNFLPKDDNEPC--SLPATAYTAA 132
Query: 206 EMTHPAAYLHQFN------SLQQQAVS-CSGLDLGIINPSEMGLRRTISAPVSAPETFID 258
E +PAA+ + + ++QQ A++ CS G PS TI A S E I
Sbjct: 133 EGANPAAFCYPPSPEAGKATMQQSALAICSK---GFEVPSLFVTHGTIPASSSHQE-LIQ 188
Query: 259 SSCYPHLQPSSNW-DSDLQN 277
++C + W D DLQ+
Sbjct: 189 NAC-------NLWEDDDLQS 201
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/114 (70%), Positives = 98/114 (85%), Gaps = 3/114 (2%)
Query: 76 GRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
G++S K+ K + N+++ E K ++IHVRARRGQAT+SHSLAERVRREKISERM+ LQ+
Sbjct: 238 GKQSVKQAKDN---NSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQE 294
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
LVPGCNKITGKA MLDEIINYVQSLQ+QVEFLSMKLA VNP L+F+VD + +K+
Sbjct: 295 LVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVDRILSKD 348
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/232 (46%), Positives = 140/232 (60%), Gaps = 25/232 (10%)
Query: 87 KVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGK 146
K +N K E + DY+HVRARRGQATDSHSLAERVRRE+IS+RMK LQDLVPGCNK+ GK
Sbjct: 178 KGKNAKPVEPPR-DYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGK 236
Query: 147 AGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVCPSNFPTIGMSS 205
A MLDEIINYVQSLQRQVEFLSMKLA VNP LD N+ L K+ F C ++ ++ S
Sbjct: 237 ALMLDEIINYVQSLQRQVEFLSMKLATVNP-LDLSNLPTLLQKDMFQACGASASSV-FSL 294
Query: 206 EMTHPA-AYLHQFNSLQQQAVSCSGLD--LGIINPSEMGLRRTISAPVSAPETFIDSSCY 262
E P + Q + Q+ + +GL+ G +NP ++ L F D +
Sbjct: 295 ESCSPGFPFGGQGDVF--QSFAPNGLENPCGGLNPLDLALSHATGGQFG----FQDGTAG 348
Query: 263 PHLQPSSNW--DSDLQNFYNV----------ASFPSQQFTGTLEASNLKMEM 302
+LQ + W + DLQ+ +++ AS +Q F G L++ M+M
Sbjct: 349 TNLQQRNYWEEEEDLQSVFHIDDNGQSQEHGASASAQSFHGQLQSQEGHMKM 400
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 115/165 (69%), Gaps = 12/165 (7%)
Query: 83 RKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 142
RK++ Q S+ K DYIH+RAR GQAT+SHSLAERVRREKISERMK+LQDLVPGC+K
Sbjct: 242 RKSNGKQTEDNSDAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 301
Query: 143 ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPV--CPSNFPT 200
+ GKA MLDEIINYVQSLQRQVEFLSMKL+ VNP LDFN++ + +K+ F P++
Sbjct: 302 VIGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPALDFNIERILSKDFFQSQGTPAS-SA 360
Query: 201 IGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRT 245
G E +H +LHQ Q A+ GI+NP++ R T
Sbjct: 361 FGFLPENSH--HFLHQ-PKHSQAALH------GIVNPTDAFGRVT 396
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 97/125 (77%), Gaps = 2/125 (1%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
Q ++AS+ Y+HVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGCNK+TGKA
Sbjct: 290 QGSQASDPPNEGYVHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAV 349
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMT 208
MLDEIINYVQSLQ+QVEFLSMKLA VNP +DFN++ L K+ P +G EM
Sbjct: 350 MLDEIINYVQSLQQQVEFLSMKLATVNPHVDFNMERLLPKDILQHQPGPSSALGFLREM- 408
Query: 209 HPAAY 213
P A+
Sbjct: 409 -PMAF 412
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/102 (79%), Positives = 90/102 (88%), Gaps = 1/102 (0%)
Query: 90 NTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 149
N+K E K DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNK+TGKA M
Sbjct: 359 NSKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 417
Query: 150 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAF 191
LDEIINYVQSLQRQVEFLSMKLA+VN R+D ++++L K+ F
Sbjct: 418 LDEIINYVQSLQRQVEFLSMKLASVNTRMDLSIESLVTKDVF 459
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/263 (42%), Positives = 146/263 (55%), Gaps = 42/263 (15%)
Query: 31 FGPGFEA-SYAISRTSS--SPPAV---VPEAVDVKGKVSVAALNEK-----VSAAVGRES 79
FGP + ISRTSS P V A+ + K EK + E+
Sbjct: 57 FGPDYNVIDGCISRTSSFQMEPVKNDEVNRAISFQNKRKPEGKTEKREKKKIKTEAETET 116
Query: 80 FKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPG 139
K K++ +SE+QK DYIHVRARRG+ATD HSLAER RREKIS++MK LQD+VPG
Sbjct: 117 SMKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPG 176
Query: 140 CNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFP 199
C K+TGKAGMLDEIINYVQSLQ+QVEFLSMKL+ +NP L+F+++ L K+ F ++ P
Sbjct: 177 CTKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVLNPELEFHINELSTKQ-FQAYFADLP 235
Query: 200 -TIGMSSEMTHPAAY-LHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFI 257
+ S M ++ LHQ S LD +IN S+ T S +
Sbjct: 236 EAVSKQSVMADLQSFPLHQQGS----------LDYSVINSSQ-----TTSLGIKD----- 275
Query: 258 DSSCYPHLQPSSNWDSDLQNFYN 280
Q S++W++ Q+ YN
Sbjct: 276 --------QTSASWETHSQSLYN 290
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 116/170 (68%), Gaps = 11/170 (6%)
Query: 31 FGPGFEASYA-ISRTSSSPPAVVP-----EAVDVKGKVSVAALNEK-----VSAAVGRES 79
FGP ++ + ISRTSS V A+ ++ K EK + A E
Sbjct: 57 FGPDYDTTDGCISRTSSFHMEPVKNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEP 116
Query: 80 FKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPG 139
K K++ +SE+QK DYIHVRARRG+ATD HSLAER RREKIS++MK LQD+VPG
Sbjct: 117 SMKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPG 176
Query: 140 CNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
CNK+TGKAGMLDEIINYVQSLQ+QVEFLSMKL+ +NP L+ ++D+L AK+
Sbjct: 177 CNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQ 226
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 116/170 (68%), Gaps = 11/170 (6%)
Query: 31 FGPGFEASYA-ISRTSSSPPAVVP-----EAVDVKGKVSVAALNEK-----VSAAVGRES 79
FGP ++ + ISRTSS V A+ ++ K EK + A E
Sbjct: 53 FGPDYDTTDGCISRTSSFHMEPVKNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEP 112
Query: 80 FKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPG 139
K K++ +SE+QK DYIHVRARRG+ATD HSLAER RREKIS++MK LQD+VPG
Sbjct: 113 SMKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPG 172
Query: 140 CNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
CNK+TGKAGMLDEIINYVQSLQ+QVEFLSMKL+ +NP L+ ++D+L AK+
Sbjct: 173 CNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQ 222
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 116/170 (68%), Gaps = 11/170 (6%)
Query: 31 FGPGFEASYA-ISRTSSSPPAVVP-----EAVDVKGKVSVAALNEK-----VSAAVGRES 79
FGP ++ + ISRTSS V A+ ++ K EK + A E
Sbjct: 41 FGPDYDTTDGCISRTSSFHMEPVKNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEP 100
Query: 80 FKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPG 139
K K++ +SE+QK DYIHVRARRG+ATD HSLAER RREKIS++MK LQD+VPG
Sbjct: 101 SMKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPG 160
Query: 140 CNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
CNK+TGKAGMLDEIINYVQSLQ+QVEFLSMKL+ +NP L+ ++D+L AK+
Sbjct: 161 CNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQ 210
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/241 (47%), Positives = 143/241 (59%), Gaps = 33/241 (13%)
Query: 83 RKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 142
+K K +K E K DYIHVRARRG+ATDSHSLAERVRREKIS+RMK LQDLVPGCNK
Sbjct: 232 KKQGKDGASKPPEPPK-DYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNK 290
Query: 143 ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVCP----SN 197
+ GKA MLDEIINYVQSLQRQVEFLSMKLA VNP+LDF N+ NL K+ C S+
Sbjct: 291 VVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLPKDMHQSCGPLQNSH 350
Query: 198 FP--TIGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIIN--PSEMGLRRTISAPVSAP 253
FP T G P YL+Q N L + C GL G+ N S L P+S+
Sbjct: 351 FPLETSGA------PLPYLNQGNPL----IGC-GLPNGMDNSQSSMHPLDPAFCRPMSSQ 399
Query: 254 E-TFIDSSCYPHLQPSSNWDSDLQNFYN----------VASFPSQQFT-GTLEASNLKME 301
+ F++ + + W DLQ+ + +A S + G+L+ ++KME
Sbjct: 400 QHPFLNGVSDAASKVGTFWQDDLQSVVHMDMGQQSQQEMAPTSSNSYNDGSLQTVHMKME 459
Query: 302 M 302
+
Sbjct: 460 L 460
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 116/170 (68%), Gaps = 11/170 (6%)
Query: 31 FGPGFEASYA-ISRTSSSPPAVVP-----EAVDVKGKVSVAALNEK-----VSAAVGRES 79
FGP ++ + ISRTSS V A+ ++ K EK + A E
Sbjct: 57 FGPDYDTTDGCISRTSSFHMEPVKYNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEP 116
Query: 80 FKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPG 139
K K++ +SE+QK DYIHVRARRG+ATD HSLAER RREKIS++MK LQD+VPG
Sbjct: 117 SMKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPG 176
Query: 140 CNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
CNK+TGKAGMLDEIINYVQSLQ+QVEFLSMKL+ +NP L+ ++D+L AK+
Sbjct: 177 CNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQ 226
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 116/170 (68%), Gaps = 11/170 (6%)
Query: 31 FGPGFEASYA-ISRTSSSPPAVVP-----EAVDVKGKVSVAALNEK-----VSAAVGRES 79
FGP ++ + ISRTSS V A+ ++ K EK + A E
Sbjct: 57 FGPDYDTTDGCISRTSSFHMEPVKNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEP 116
Query: 80 FKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPG 139
K K++ +SE+QK DYIHVRARRG+ATD HSLAER RREKIS++MK LQD+VPG
Sbjct: 117 SMKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPG 176
Query: 140 CNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
CNK+TGKAGMLDEIINYVQSLQ+QVEFLSMKL+ +NP L+ ++D+L AK+
Sbjct: 177 CNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQ 226
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/109 (74%), Positives = 94/109 (86%), Gaps = 2/109 (1%)
Query: 85 ADKVQNTKASEVQK--HDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 142
D+ QN +S+ + DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNK
Sbjct: 269 GDEKQNMSSSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNK 328
Query: 143 ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAF 191
+TGKA MLDEIINYV+SLQRQVEFLSMKL++VN RLDF+ ++L +K+ F
Sbjct: 329 VTGKALMLDEIINYVRSLQRQVEFLSMKLSSVNTRLDFSTESLISKDIF 377
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 116/170 (68%), Gaps = 11/170 (6%)
Query: 31 FGPGFEASYA-ISRTSSSPPAVVP-----EAVDVKGKVSVAALNEK-----VSAAVGRES 79
FGP ++ + ISRTSS V A+ ++ K EK + A E
Sbjct: 41 FGPDYDTTDGCISRTSSFHMEPVKNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEP 100
Query: 80 FKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPG 139
K K++ +SE+QK DYIHVRARRG+ATD HSLAER RREKIS++MK LQD+VPG
Sbjct: 101 SMKGKSNMSNXETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPG 160
Query: 140 CNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
CNK+TGKAGMLDEIINYVQSLQ+QVEFLSMKL+ +NP L+ ++D+L AK+
Sbjct: 161 CNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPELECHIDDLSAKQ 210
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/159 (55%), Positives = 110/159 (69%), Gaps = 7/159 (4%)
Query: 52 VPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNT------KASEVQKHDYIHVR 105
+PEA K +V E +S KK K D+ + T ++ E K +YIH+R
Sbjct: 149 LPEAESQWNKKAVEEFQEDPQRG-NDQSQKKHKNDQSKETVNKESSQSEEAPKENYIHMR 207
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
ARRGQAT+SHSLAERVRREKISERM+ LQ+L PGCNKITGKA MLDEIINYVQSLQ+QVE
Sbjct: 208 ARRGQATNSHSLAERVRREKISERMRLLQELAPGCNKITGKAVMLDEIINYVQSLQQQVE 267
Query: 166 FLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMS 204
FLSMKLA VNP ++ ++D + AK+ N PT+G++
Sbjct: 268 FLSMKLATVNPEINIDIDRILAKDLLQSRDRNTPTLGLN 306
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 132/217 (60%), Gaps = 21/217 (9%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DYIHVRARRG+ATDSHSLAERVRREKIS+RMK LQDLVPGCNK+ GKA MLDEIINYVQS
Sbjct: 266 DYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQS 325
Query: 160 LQRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVC----PSNFPTIGMSSEMTHPAAYL 214
LQRQVEFLSMKLA VNP+LDF N+ NL AK+ C S+FP + P Y+
Sbjct: 326 LQRQVEFLSMKLATVNPQLDFNNLPNLLAKDMQQSCGQLQSSHFPLEASGA----PLPYM 381
Query: 215 HQFNSLQQQAVSCSGLDLGIINPSEMG--LRRTISAPVSAPETFIDSSCYPHLQPSSNWD 272
Q + + C G+ G+ + M L P+ + F++ Q + W
Sbjct: 382 SQPHQ-GSNPLDC-GMTDGMDDQGSMHHQLDPAFCRPMGSHHHFLNGVSDAASQVGAFW- 438
Query: 273 SDLQNFYNVASFPSQQ-------FTGTLEASNLKMEM 302
DLQ+ + SQ+ + G+L+ ++KME+
Sbjct: 439 QDLQSVVQMDMGQSQEIATSSNSYDGSLQTVHMKMEL 475
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 132/216 (61%), Gaps = 10/216 (4%)
Query: 69 EKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISE 128
E+ + E + + K K +N K E K DY+HVRARRGQATDSHSLAERVRRE+IS+
Sbjct: 156 EQARSGSSVEDYGEPKKGKGKNAKPVEPPK-DYVHVRARRGQATDSHSLAERVRRERISQ 214
Query: 129 RMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFA 187
RMK+LQDLVPGCNK+ GKA MLDEIINYVQSLQRQVEFLSMKLA VNP LDF N+ L
Sbjct: 215 RMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNP-LDFSNLPTLLH 273
Query: 188 KEAFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTIS 247
K+ + C + ++ S E ++ A + Q V S +N ++ L S
Sbjct: 274 KDMYQACGPSASSV-FSLESSNSAFPFSDQGDVFQSFVPNSMESQCTLNQLDLALSHATS 332
Query: 248 APVSAPETFIDSSCYPHLQPSSN--WDSDLQNFYNV 281
A + F D + +LQ W+ DLQ+ ++V
Sbjct: 333 AQYA----FQDGTGSTNLQQQQRNFWEDDLQSVFHV 364
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/153 (62%), Positives = 107/153 (69%), Gaps = 6/153 (3%)
Query: 47 SPPAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKR--KADKVQNTK--ASEVQKHDYI 102
S P V EA K A +N KV A S R K K +N+ A+E K DY+
Sbjct: 114 SSPCEVGEAKAPDSKKCKAEVNPKVEEAASDGSVGDRVQKQGKGKNSSKPAAEPPK-DYV 172
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
HVRARRGQATDSHSLAERVRREKIS+RMK LQDLVPGCNK+ GKA MLDEIINYVQSLQ+
Sbjct: 173 HVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQ 232
Query: 163 QVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVC 194
QVEFLSMKLA VNP+LDF N+ L K+ F C
Sbjct: 233 QVEFLSMKLATVNPQLDFGNLSTLLQKDMFQSC 265
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/153 (62%), Positives = 107/153 (69%), Gaps = 6/153 (3%)
Query: 47 SPPAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKR--KADKVQNTK--ASEVQKHDYI 102
S P V EA K A +N KV A S R K K +N+ A+E K DY+
Sbjct: 114 SSPCEVGEAKAPDSKKCKAEVNPKVEEAASDGSVGDRVQKQGKGKNSSKPAAEPPK-DYV 172
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
HVRARRGQATDSHSLAERVRREKIS+RMK LQDLVPGCNK+ GKA MLDEIINYVQSLQ+
Sbjct: 173 HVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQ 232
Query: 163 QVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVC 194
QVEFLSMKLA VNP+LDF N+ L K+ F C
Sbjct: 233 QVEFLSMKLATVNPQLDFGNLSTLLQKDMFQSC 265
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 115/241 (47%), Positives = 142/241 (58%), Gaps = 33/241 (13%)
Query: 83 RKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 142
+K K +K E K DYIH RARRG+ATDSHSLAERVRREKIS+RMK LQDLVPGCNK
Sbjct: 232 KKQGKDGASKPPEPPK-DYIHFRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNK 290
Query: 143 ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVCP----SN 197
+ GKA MLDEIINYVQSLQRQVEFLSMKLA VNP+LDF N+ NL K+ C S+
Sbjct: 291 VVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLPKDMHQSCGPLQNSH 350
Query: 198 FP--TIGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIIN--PSEMGLRRTISAPVSAP 253
FP T G P YL+Q N L + C GL G+ N S L P+S+
Sbjct: 351 FPLETSGA------PLPYLNQGNPL----IGC-GLPNGMDNSQSSMHPLDPAFCRPMSSQ 399
Query: 254 E-TFIDSSCYPHLQPSSNWDSDLQNFYN----------VASFPSQQFT-GTLEASNLKME 301
+ F++ Q + W DLQ+ + +A S + G+L+ ++KME
Sbjct: 400 QHPFLNGVSDAASQVGTFWQDDLQSVVHMDMGQQSQQEMAPTSSNSYNDGSLQTVHMKME 459
Query: 302 M 302
+
Sbjct: 460 L 460
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 108/158 (68%), Gaps = 7/158 (4%)
Query: 69 EKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISE 128
E+V+A+ K +K K + K + DY+HVRARRGQATDSHSLAERVRREKIS+
Sbjct: 122 EEVAASDASVELKAQKKGKGKTAKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQ 181
Query: 129 RMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFA 187
RMK+LQDLVPGCNK+ GKA MLDEIINYVQSLQ+QVEFLSMKLA VNP+LDF N+ L
Sbjct: 182 RMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLH 241
Query: 188 KEAFPVCP----SNFP--TIGMSSEMTHPAAYLHQFNS 219
K+ + C S FP + G + A H F S
Sbjct: 242 KDMYQPCGPSANSVFPLESDGAAFPFCDQADLFHSFGS 279
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 108/158 (68%), Gaps = 7/158 (4%)
Query: 69 EKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISE 128
E+V+A+ K +K K + K + DY+HVRARRGQATDSHSLAERVRREKIS+
Sbjct: 122 EEVAASDASVELKAQKKGKGKTAKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQ 181
Query: 129 RMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFA 187
RMK+LQDLVPGCNK+ GKA MLDEIINYVQSLQ+QVEFLSMKLA VNP+LDF N+ L
Sbjct: 182 RMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLH 241
Query: 188 KEAFPVCP----SNFP--TIGMSSEMTHPAAYLHQFNS 219
K+ + C S FP + G + A H F S
Sbjct: 242 KDMYQPCGPSANSVFPLESDGAAFPFCDQADLFHSFGS 279
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 108/158 (68%), Gaps = 7/158 (4%)
Query: 69 EKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISE 128
E+V+A+ K +K K + K + DY+HVRARRGQATDSHSLAERVRREKIS+
Sbjct: 122 EEVAASDASVELKAQKKGKGKTAKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQ 181
Query: 129 RMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFA 187
RMK+LQDLVPGCNK+ GKA MLDEIINYVQSLQ+QVEFLSMKLA VNP+LDF N+ L
Sbjct: 182 RMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLH 241
Query: 188 KEAFPVCP----SNFP--TIGMSSEMTHPAAYLHQFNS 219
K+ + C S FP + G + A H F S
Sbjct: 242 KDMYQPCGPSANSVFPLESDGAAFPFCDQADLFHSFGS 279
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 88/127 (69%), Positives = 99/127 (77%), Gaps = 6/127 (4%)
Query: 78 ESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLV 137
E+ +K K ++K E K DYIHVRARRG+ATDSHSLAERVRREKIS+RMK LQDLV
Sbjct: 49 ENGGGKKQGKDSSSKPPEPPK-DYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLV 107
Query: 138 PGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVC-- 194
PGCNK+ GKA MLDEIINYVQSLQRQVEFLSMKLA VNP+LDF N+ NL AK+ C
Sbjct: 108 PGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLAKDMHQSCSP 167
Query: 195 --PSNFP 199
S+FP
Sbjct: 168 LQSSHFP 174
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/231 (45%), Positives = 135/231 (58%), Gaps = 22/231 (9%)
Query: 87 KVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGK 146
K +N K E + DY+HVRARRGQATDSHSLAERVRRE+IS+RMK LQDLVPGCNK+ GK
Sbjct: 178 KGKNAKPVEPPR-DYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGK 236
Query: 147 AGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSE 206
A MLDEIINYVQSLQRQVEFLSMKLA VNP N+ L K+ F C ++ ++ S E
Sbjct: 237 ALMLDEIINYVQSLQRQVEFLSMKLATVNPLDLSNLPTLLQKDMFQACGASASSV-FSLE 295
Query: 207 MTHPAAYLHQFNSLQQQAVSCSGLD--LGIINPSEMGLRRTISAPVSAPETFIDSSCYPH 264
P + Q V +GL+ G +NP ++ L + F D + +
Sbjct: 296 SCSPGFPFGGQGDVFQSFVP-NGLENPCGGLNPLDLALSQATGGQFG----FQDGTAGTN 350
Query: 265 LQPSSNW---DSDLQNFYNV----------ASFPSQQFTGTLEASNLKMEM 302
LQ + W + DLQ+ +++ AS +Q F G L+ M+M
Sbjct: 351 LQQRNYWEEEEEDLQSVFHIDDNGQSQEHGASASAQSFHGQLQPQEGHMKM 401
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/236 (45%), Positives = 134/236 (56%), Gaps = 31/236 (13%)
Query: 59 KGKVSVAALNEKV------SAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQAT 112
K KV VA + KV +A G K+ K ++ +A + DY+HVRARRGQAT
Sbjct: 126 KCKVEVAPVKPKVEETASDGSAGGERGRKQAKGKSSKSKQADDEPPRDYVHVRARRGQAT 185
Query: 113 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLA 172
DSHSLAERVRREKI+ +MK LQDLVPGCNK+ GKA MLDEIINYVQSLQ+QVEFLSMKLA
Sbjct: 186 DSHSLAERVRREKITIKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQQQVEFLSMKLA 245
Query: 173 AVNPRLDFN-VDNLFAK---EAFPVCPSN-FP--TIGMSSEMTHPAAYLHQFNSLQQQAV 225
VNP+LDF+ + L K EAF PS+ FP + G + A F S +
Sbjct: 246 TVNPQLDFSTLSTLLHKDMNEAFGPSPSSVFPLESAGGAFPFYEQADIFQSFGSGSME-- 303
Query: 226 SCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQNFYNV 281
N +GL T+ S P+ H Q + WD +LQN ++
Sbjct: 304 ----------NQCPLGLLDTVLPHASNPQYAF------HKQQQNFWDENLQNALHI 343
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/106 (78%), Positives = 93/106 (87%), Gaps = 4/106 (3%)
Query: 91 TKASEV---QKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKA 147
T AS V QK DYIHVRARRGQATDSHSLAERVRRE+ISERM+YLQ+LVPGCNK+TGKA
Sbjct: 148 TSASTVTAGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKA 207
Query: 148 GMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN-VDNLFAKEAFP 192
GMLDEIINYVQSLQ+QVEFLSMK+AA NP ++FN V++LF A P
Sbjct: 208 GMLDEIINYVQSLQKQVEFLSMKIAASNPVVNFNIVEDLFGPAAQP 253
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 121/197 (61%), Gaps = 20/197 (10%)
Query: 97 QKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 156
QK DYIHVRARRGQATDSHSLAERVRRE+ISERM+YLQ+LVPGC+K+TGKAGMLDEIINY
Sbjct: 139 QKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINY 198
Query: 157 VQSLQRQVEFLSMKLAAVNPRLDFN-VDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLH 215
VQSLQ+QVEFLSMK+AA NP + F+ V++LF ++ C G ++ P+
Sbjct: 199 VQSLQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQAC-------GPAAGQLEPSCLQM 251
Query: 216 QFNSLQQQAVSCSGLDLGIINPSEMGLRR-----TISAPVSAPETFIDSSCYPHLQPSSN 270
+ +QQ + P +M L S PVSA + ++ ++P N
Sbjct: 252 SMSPMQQVVHPSAAAGSTGFGPLDMVLSNLYAPAAASCPVSAAPSVSVAAGPSTIEPCLN 311
Query: 271 -------WDSDLQNFYN 280
WD QN ++
Sbjct: 312 VNGTAAAWDIGSQNLFS 328
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/93 (86%), Positives = 86/93 (92%), Gaps = 2/93 (2%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
K DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGC+K+TGKA MLDEIINYV
Sbjct: 70 KQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 129
Query: 158 QSLQRQVEFLSMKLAAVN-PRLDFNVDNLFAKE 189
QSLQRQ+EFLSMKLAAVN PRLD N D L +K+
Sbjct: 130 QSLQRQIEFLSMKLAAVNPPRLDHNYD-LLSKD 161
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/131 (67%), Positives = 98/131 (74%), Gaps = 5/131 (3%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DYIHVRARRGQATDSHSLAERVRREKI ERMK LQDLVPGCNK+TGKA MLDEIINYVQS
Sbjct: 295 DYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 354
Query: 160 LQRQVEFLSMKLAAVN-PRLDFNVDNLFAKEAF-PVCPSNFPTIGM---SSEMTHPAAYL 214
LQRQVEFLSMKL++VN RLDFNVD L +K+ P + G+ SS H L
Sbjct: 355 LQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVMIPSSNNRLHEEGLQSKSSSRHHQQQQL 414
Query: 215 HQFNSLQQQAV 225
+ +NS Q +
Sbjct: 415 NMYNSNNAQLL 425
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/117 (70%), Positives = 94/117 (80%), Gaps = 3/117 (2%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DYIHVRARRGQATDSHSLAERVRREKI ERMK LQDLVPGC+K+TGKA MLDEIINYVQS
Sbjct: 252 DYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQS 311
Query: 160 LQRQVEFLSMKLAAVNPRLDFNVDNLFA--KEAFPVCPSNFPTIGMSSE-MTHPAAY 213
LQRQVEFLSMKL+ VNPRL+ D+ F +A +C + +I M+ + + PAAY
Sbjct: 312 LQRQVEFLSMKLSTVNPRLELGADDSFVPRDDANKMCAAATSSISMAQQPLPLPAAY 368
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/113 (72%), Positives = 90/113 (79%), Gaps = 5/113 (4%)
Query: 84 KADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI 143
+A K N + + K DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK+
Sbjct: 34 RALKDSNNRNKILSKQDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKV 93
Query: 144 TGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNP-----RLDFNVDNLFAKEAF 191
TGKA MLDEIINYVQSLQRQVE LSMKLA+VNP RLD+N + K+
Sbjct: 94 TGKAVMLDEIINYVQSLQRQVESLSMKLASVNPGPSTARLDYNFETALNKDML 146
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 107/158 (67%), Gaps = 7/158 (4%)
Query: 69 EKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISE 128
E+V+A+ K +K K + K + DY+HVRARRGQATDSHSLAERVRREKIS+
Sbjct: 122 EEVAASDASVELKAQKKGKGKTAKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQ 181
Query: 129 RMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFA 187
RMK+LQDLVPGCNK+ GKA MLDEIINYVQSLQ+QVEFLSMKLA VNP+LDF N+ L
Sbjct: 182 RMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLH 241
Query: 188 KEAFPVCP----SNFP--TIGMSSEMTHPAAYLHQFNS 219
K+ C S FP + G + A H F S
Sbjct: 242 KDMHQPCGPSANSVFPLESDGAAFPFCDQADLFHSFGS 279
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 106/139 (76%), Gaps = 5/139 (3%)
Query: 76 GRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
G+++ K+ K +N+ + E K +YIHVRARRGQAT+SHSLAERVRREKISERM+ LQ+
Sbjct: 218 GKQAAKQAK----ENSHSGEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQE 273
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCP 195
LVPGCNKITGKA MLDEIINYVQSLQ+QVEFLSMKLA VNP L+ +++ + +K+
Sbjct: 274 LVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNIDIERILSKDILHSRG 333
Query: 196 SNFPTIGMSSEMT-HPAAY 213
N +G+S + HP ++
Sbjct: 334 GNAAIMGLSPGINAHPYSH 352
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/171 (53%), Positives = 102/171 (59%), Gaps = 34/171 (19%)
Query: 63 SVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQK-----------------HDYIHVR 105
S+ A N KVS G KR V + + V+K DYIHVR
Sbjct: 133 SLTASNSKVSGENGGSKGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPKDYIHVR 192
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
ARRGQATDSHSLAER RREKISERM LQDLVPGCN+ITGKA MLDEIINYVQSLQRQVE
Sbjct: 193 ARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVE 252
Query: 166 FLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQ 216
FLSMKLA VNPR++FN + +S+EM P L Q
Sbjct: 253 FLSMKLATVNPRMEFNAN-----------------ASLSTEMIQPGESLTQ 286
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 88/99 (88%), Gaps = 2/99 (2%)
Query: 90 NTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 149
N+K E K DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNK+TGKA M
Sbjct: 203 NSKPPEAPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 261
Query: 150 LDEIINYVQSLQRQVEFLSMKLAAVN-PRLDFNVDNLFA 187
LDEIINYVQSLQ QVEFLSMKLA+VN R+DFNVD+L +
Sbjct: 262 LDEIINYVQSLQHQVEFLSMKLASVNTTRVDFNVDSLIS 300
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/139 (60%), Positives = 105/139 (75%), Gaps = 5/139 (3%)
Query: 76 GRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
G+++ K+ K D T++ EV K +Y HVRARRGQAT+SHSLAERVRREKISERM+ LQ+
Sbjct: 139 GKQAAKQAKDD----TQSGEVPKENYFHVRARRGQATNSHSLAERVRREKISERMRMLQE 194
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCP 195
LVPGCNKITGKA MLDEIINYVQSLQ+QVEFLSMKLA VNP L +V+ + +K+
Sbjct: 195 LVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELQIDVERILSKDILHSRG 254
Query: 196 SNFPTIGMSSEM-THPAAY 213
N +G S + +HP ++
Sbjct: 255 GNAAILGFSPGISSHPYSH 273
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 102/172 (59%), Gaps = 36/172 (20%)
Query: 63 SVAALNEKVSAAVGRESFKKR------------------KADKVQNTKASEVQKHDYIHV 104
S+ A N KVS G KR K D + K E K DYIHV
Sbjct: 136 SLTASNSKVSGENGGSKGGKRSKQDEAGSSKNGVEKCDSKGDNKDDAKPPEAPK-DYIHV 194
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RARRGQATDSHSLAER RREKISERM LQDLVPGCN+ITGKA MLDEIINYVQSLQRQV
Sbjct: 195 RARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQV 254
Query: 165 EFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQ 216
EFLSMKLA VNPR++FN + +S+EM P L Q
Sbjct: 255 EFLSMKLATVNPRMEFNAN-----------------AALSTEMIQPGESLTQ 289
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/227 (44%), Positives = 136/227 (59%), Gaps = 38/227 (16%)
Query: 77 RESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 136
R++ K+ K N+ +E K +YIHVRA+RGQAT+SHSLAERVRRE+ISERM+ LQ+L
Sbjct: 211 RQAVKEAK----DNSSGAEASKENYIHVRAKRGQATNSHSLAERVRRERISERMRLLQEL 266
Query: 137 VPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPS 196
VPGCNKITGKA MLDEIINYVQSLQ+QVEFLSMKLA VNP L+ +++ L +K+ S
Sbjct: 267 VPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNVDIERLLSKDILHSRGS 326
Query: 197 NFPTIGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETF 256
N +G+ ++ H F L Q G +N + P +AP+
Sbjct: 327 NATALGIGPGLSSS----HPFQGLPQ----------GTLN----------AFPGTAPQ-- 360
Query: 257 IDSSCYPHLQPSSNWDSDLQNFYNVASFPSQQFTGTLEASNL-KMEM 302
+ L P + W+++LQN + S G+L S L KME+
Sbjct: 361 -----FQSL-PQNLWNNELQNILQ-NGYDSNPSVGSLGPSGLSKMEL 400
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/93 (86%), Positives = 86/93 (92%), Gaps = 2/93 (2%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
K DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGC+K+TGKA MLDEIINYV
Sbjct: 58 KQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYV 117
Query: 158 QSLQRQVEFLSMKLAAVN-PRLDFNVDNLFAKE 189
QSLQRQVEFLSMKLA VN PRLD++ D L +KE
Sbjct: 118 QSLQRQVEFLSMKLATVNVPRLDYSYD-LLSKE 149
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 88/99 (88%), Gaps = 2/99 (2%)
Query: 90 NTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 149
N+K E K DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNK+TGKA M
Sbjct: 241 NSKPPEAPK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 299
Query: 150 LDEIINYVQSLQRQVEFLSMKLAAVN-PRLDFNVDNLFA 187
LDEIINYVQSLQ QVEFLSMKLA+VN R+DFNVD+L +
Sbjct: 300 LDEIINYVQSLQHQVEFLSMKLASVNTTRVDFNVDSLIS 338
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/137 (63%), Positives = 97/137 (70%), Gaps = 9/137 (6%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DYIHVRARRGQATDSHSLAERVRRE+ISERMK LQ LVPGCNKITGKA MLDEIINYVQS
Sbjct: 77 DYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQS 136
Query: 160 LQRQVEFLSMKLAAVNPRLDFNVDNLFAKEA----FPVCPSNFPTIGMSSEMTHPAAYLH 215
LQRQVEFLSMKLA +NP+LDF+ + +K+ P PS+ PT + T A
Sbjct: 137 LQRQVEFLSMKLATMNPQLDFDSHYMPSKDMSHMPVPAYPSSDPTTTTAFSYTGSPATAD 196
Query: 216 QFNSLQQQAVSCSGLDL 232
F +C LDL
Sbjct: 197 PFT-----VYNCWELDL 208
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 79/126 (62%), Positives = 94/126 (74%)
Query: 90 NTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 149
N+ E K +YIHVRARRGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNKITGKA M
Sbjct: 251 NSSNGEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVM 310
Query: 150 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTH 209
LDEIINYVQSLQ+QVEFLSMKLA VNP L+ +++ L +K+ + +G M+
Sbjct: 311 LDEIINYVQSLQQQVEFLSMKLATVNPELNIDIERLLSKDILNSRGGSTSVLGFGPGMSS 370
Query: 210 PAAYLH 215
Y H
Sbjct: 371 SHPYPH 376
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 77/119 (64%), Positives = 98/119 (82%)
Query: 84 KADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI 143
K K +++ ++E K +YIHVRARRGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNKI
Sbjct: 59 KQTKEKSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI 118
Query: 144 TGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIG 202
TGKA MLDEIINYVQSLQ+QVEFLSMKLA VNP ++ +++ + +K+ F + S+ +G
Sbjct: 119 TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPDVNVDIERILSKDIFNIRGSSGNVLG 177
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 77/119 (64%), Positives = 98/119 (82%)
Query: 84 KADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI 143
K K +++ ++E K +YIHVRARRGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNKI
Sbjct: 212 KQTKEKSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI 271
Query: 144 TGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIG 202
TGKA MLDEIINYVQSLQ+QVEFLSMKLA VNP ++ +++ + +K+ F + S+ +G
Sbjct: 272 TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPDVNVDIERILSKDIFNIRGSSGNVLG 330
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 109/158 (68%), Gaps = 7/158 (4%)
Query: 34 GFEASYAISRTSSSPPAVVPEAVDVKGKVS--VAALNEKVSAAVGRESFKKRKADKVQNT 91
G ++ + T ++P + PE K K+S V +E+ A G +V
Sbjct: 172 GGKSKAKVVVTPAAPKSRAPETRAKKCKLSTDVGHDDEEQKPAAGEAWHDNSNGKEV--- 228
Query: 92 KASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLD 151
A+E K DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGC+K+TGKA MLD
Sbjct: 229 -AAEPSK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLD 286
Query: 152 EIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
EIINYVQSLQRQVEFLSMKL+ VNPRL +VD+ K+
Sbjct: 287 EIINYVQSLQRQVEFLSMKLSTVNPRLKLDVDSCIPKD 324
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/223 (46%), Positives = 132/223 (59%), Gaps = 28/223 (12%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
D+IHVRARRG+ATDSHSLAERVRREKIS+RMK LQDLVPGCNK+ GKA MLDEIINYVQS
Sbjct: 260 DFIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQS 319
Query: 160 LQRQVEFLSMKLAAVNPRLDF-NVDNLFAKE-------AFPVCPSNFPTIGMSSEMTHPA 211
LQRQVEFLSMKLA VNP+LDF N+ NL AK+ S+FP + +
Sbjct: 320 LQRQVEFLSMKLATVNPQLDFNNLPNLLAKDMQQQSCGQLQQGSSHFPLEASGAALP--- 376
Query: 212 AYLHQFNSLQQQAVSCS----GLDLGIINPSEMGLRRTI-SAPVSAPETFIDSSCYPHLQ 266
Y+ Q N+ S G D G ++P + R + S + F+ + Q
Sbjct: 377 -YMGQGNNDHLGGCGMSDGGMGDDQGAMHPLDQAFCRPMGSQQQQQQQHFLSDAAS---Q 432
Query: 267 PSSNWDSDLQNFYNVASFPSQQ-------FTGTLEASNLKMEM 302
+ W DLQ+ + SQ+ + G+L+ ++KME+
Sbjct: 433 VGAFW-QDLQSVVQMDMGQSQEIATSSNSYDGSLQTVHMKMEL 474
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/150 (60%), Positives = 106/150 (70%), Gaps = 13/150 (8%)
Query: 93 ASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDE 152
A E QK Y HVRAR+GQAT++HSLAER+RREKISERMK LQDLVPGC+K+TGKA MLDE
Sbjct: 165 AGEAQKEGYSHVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDE 224
Query: 153 IINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEA----FPVCPSNFPT-IGMSSEM 207
IINYVQSLQRQVEFLSMKL+AVNPR+D ++++L FP PS+ P S+EM
Sbjct: 225 IINYVQSLQRQVEFLSMKLSAVNPRIDLDIESLVNNSKDVLRFPGQPSSAPMGFSFSTEM 284
Query: 208 THPAAYLHQFNSLQQQAVSCSGLDLGIINP 237
P L + LQ G G+INP
Sbjct: 285 M-PGLQLSRPGILQ-------GGVHGMINP 306
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/223 (46%), Positives = 132/223 (59%), Gaps = 28/223 (12%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
D+IHVRARRG+ATDSHSLAERVRREKIS+RMK LQDLVPGCNK+ GKA MLDEIINYVQS
Sbjct: 260 DFIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQS 319
Query: 160 LQRQVEFLSMKLAAVNPRLDF-NVDNLFAKE-------AFPVCPSNFPTIGMSSEMTHPA 211
LQRQVEFLSMKLA VNP+LDF N+ NL AK+ S+FP + +
Sbjct: 320 LQRQVEFLSMKLATVNPQLDFNNLPNLLAKDMQQQSCGQLQQGSSHFPLEASGAALP--- 376
Query: 212 AYLHQFNSLQQQAVSCS----GLDLGIINPSEMGLRRTI-SAPVSAPETFIDSSCYPHLQ 266
Y+ Q N+ S G D G ++P + R + S + F+ + Q
Sbjct: 377 -YMGQGNNDHLGGCGMSDGGMGDDQGAMHPLDQAFCRPMGSQQQQQQQHFLSDAAS---Q 432
Query: 267 PSSNWDSDLQNFYNVASFPSQQ-------FTGTLEASNLKMEM 302
+ W DLQ+ + SQ+ + G+L+ ++KME+
Sbjct: 433 VGAFW-QDLQSVVQMDMGQSQEIATSSNSYDGSLQTVHMKMEL 474
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/137 (63%), Positives = 97/137 (70%), Gaps = 9/137 (6%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DYIHVRARRGQATDSHSLAERVRRE+ISERMK LQ LVPGCNKITGKA MLDEIINYVQS
Sbjct: 107 DYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQS 166
Query: 160 LQRQVEFLSMKLAAVNPRLDFNVDNLFAKEA----FPVCPSNFPTIGMSSEMTHPAAYLH 215
LQRQVEFLSMKLA +NP+LDF+ + +K+ P PS+ PT + T A
Sbjct: 167 LQRQVEFLSMKLATMNPQLDFDSHYMPSKDMSHMPVPAYPSSDPTTTTAFSYTGSPATAD 226
Query: 216 QFNSLQQQAVSCSGLDL 232
F +C LDL
Sbjct: 227 PFT-----VYNCWELDL 238
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/121 (66%), Positives = 97/121 (80%), Gaps = 6/121 (4%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
Y+HVRARRGQATDSHSLAER RREKI++RMK LQ+LVPGCNKI+G A +LDEIIN+VQSL
Sbjct: 174 YVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQSL 233
Query: 161 QRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYL----HQ 216
Q QVEFLSM+LAAVNPR+DFN+D++ + E+ + SNFP GM + P A + HQ
Sbjct: 234 QCQVEFLSMRLAAVNPRIDFNLDSMLSAESGSLIDSNFP--GMVMPLMWPEAEVNGNRHQ 291
Query: 217 F 217
F
Sbjct: 292 F 292
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 132/223 (59%), Gaps = 37/223 (16%)
Query: 3 GQQVKPDPAFENGWPDLGK-----IVAPAAGYGFGP-GFEASYAIS--------RTSSS- 47
GQQ P+ G LG P GY GP GF+A Y++ R+SS
Sbjct: 4 GQQSDQGPSVNGGTEFLGGNWNSVATHPKMGYNSGPYGFQA-YSMELEERPGPYRSSSGT 62
Query: 48 ----------PPAVVPEAVDVKGKVS------VAALNEKVSAAVGRESFKKRK--ADKVQ 89
P VV + + S V +VS+ R S ++ + + K+Q
Sbjct: 63 FSQNIQLSVEPSGVVKKRKGIDDCTSLLNPSNVGDQQTEVSSQTERNSLEENRTISPKMQ 122
Query: 90 NTKAS---EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGK 146
+ + S + K DY+H+RA+RGQAT+SHSLAER+RR+KISERMK LQDLVPGC+KITGK
Sbjct: 123 SKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGK 182
Query: 147 AGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
A MLDEIINYVQSLQRQVEFLSMKLA VNP L F+++ + +K+
Sbjct: 183 AVMLDEIINYVQSLQRQVEFLSMKLATVNPELGFDIEQILSKQ 225
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/112 (73%), Positives = 96/112 (85%), Gaps = 6/112 (5%)
Query: 81 KKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
K+ K+D +K E QK DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGC
Sbjct: 273 KQNKSD----SKPPEPQK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGC 327
Query: 141 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNL-FAKEAF 191
NK+TGKA MLDEIINYVQSLQRQVEFLSMKL++VN ++D ++++L +K+ F
Sbjct: 328 NKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTKMDLSIESLVVSKDIF 379
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/116 (66%), Positives = 98/116 (84%), Gaps = 4/116 (3%)
Query: 75 VGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQ 134
G++ K++K D +++ E K ++IHVRARRGQAT+SHSLAERVRREKISERM+ LQ
Sbjct: 206 CGKQLLKQKKDD----SESEEGSKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQ 261
Query: 135 DLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEA 190
+LVPGC+K TGKA MLDEIINYVQSLQ+QVEFLSMKLA VNP+L+FNV+ + +K++
Sbjct: 262 ELVPGCDKKTGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPQLNFNVEQICSKDS 317
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/94 (79%), Positives = 88/94 (93%), Gaps = 1/94 (1%)
Query: 97 QKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 156
QK DYIHVRARRGQATDSHSLAERVRRE+ISERM+YLQ+LVPGC+K+TGKAGMLDEIINY
Sbjct: 146 QKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINY 205
Query: 157 VQSLQRQVEFLSMKLAAVNPRLDFN-VDNLFAKE 189
VQSLQ+QVEFLSMK+AA NP + F+ V++LF ++
Sbjct: 206 VQSLQKQVEFLSMKIAASNPVVSFDIVEDLFGRQ 239
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/231 (45%), Positives = 135/231 (58%), Gaps = 25/231 (10%)
Query: 87 KVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGK 146
K +N K E + DY+HVRARRGQATDSHSLAERVRRE+IS+RMK LQDLVPGCNK+ GK
Sbjct: 178 KGKNAKPVEPPR-DYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGK 236
Query: 147 AGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSE 206
A MLDEIINYVQSLQRQVEFLSMKLA VNP N+ L K+A C ++ ++ S E
Sbjct: 237 ALMLDEIINYVQSLQRQVEFLSMKLATVNPLDLSNLPTLLQKDA---CGASASSV-FSLE 292
Query: 207 MTHPAAYLHQFNSLQQQAVSCSGLD--LGIINPSEMGLRRTISAPVSAPETFIDSSCYPH 264
P + Q V +GL+ G +NP ++ L + F D + +
Sbjct: 293 SCSPGFPFGGQGDVFQSFVP-NGLENPCGGLNPLDLALSQATGGQFG----FQDGTAGTN 347
Query: 265 LQPSSNW---DSDLQNFYNV----------ASFPSQQFTGTLEASNLKMEM 302
LQ + W + DLQ+ +++ AS +Q F G L+ M+M
Sbjct: 348 LQQRNYWEEEEEDLQSVFHIDDNGQSQEHGASASAQSFHGQLQPQEGHMKM 398
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/115 (66%), Positives = 89/115 (77%)
Query: 84 KADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI 143
+ K + A++ + YIHVRAR+GQAT+ HSLAER+RREKISERMK LQDLVPGC K+
Sbjct: 154 RKKKGKGASAADGESESYIHVRARKGQATNRHSLAERLRREKISERMKLLQDLVPGCTKV 213
Query: 144 TGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNF 198
TGKA MLDEIINYVQSLQRQVEFLSMKLAAVNP+L N+ L +K+ C F
Sbjct: 214 TGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPQLGLNIKQLLSKDFCKKCAPKF 268
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 93/127 (73%), Gaps = 9/127 (7%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DY+HVRARRGQATDSHSLAERVRREKIS+RMK+LQDLVPGCNK+ GKA MLDEIINYVQS
Sbjct: 152 DYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQS 211
Query: 160 LQRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAF------PVCPSNFP--TIGMSSEMTHP 210
LQ+QVEFLSMKLA VNP LDF N+ L K+ + P S FP + G +
Sbjct: 212 LQQQVEFLSMKLATVNPELDFSNLSTLLHKDMYQQPCGGPSASSVFPLESAGAAFPFCEQ 271
Query: 211 AAYLHQF 217
A H F
Sbjct: 272 ADLFHSF 278
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 93/127 (73%), Gaps = 9/127 (7%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DY+HVRARRGQATDSHSLAERVRREKIS+RMK+LQDLVPGCNK+ GKA MLDEIINYVQS
Sbjct: 152 DYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQS 211
Query: 160 LQRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAF------PVCPSNFP--TIGMSSEMTHP 210
LQ+QVEFLSMKLA VNP LDF N+ L K+ + P S FP + G +
Sbjct: 212 LQQQVEFLSMKLATVNPELDFSNLSTLLHKDMYQQPCGGPSASSVFPLESAGAAFPFCEQ 271
Query: 211 AAYLHQF 217
A H F
Sbjct: 272 ADLFHSF 278
>gi|125578091|gb|EAZ19313.1| hypothetical protein OsJ_34859 [Oryza sativa Japonica Group]
Length = 311
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/105 (76%), Positives = 85/105 (80%), Gaps = 14/105 (13%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK--------------ITG 145
DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNK +TG
Sbjct: 141 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTG 200
Query: 146 KAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEA 190
KA MLDEIINYVQSLQRQVEFLSMKL+ VNP+LDF+VDN K+A
Sbjct: 201 KAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQLDFDVDNFIPKDA 245
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/92 (79%), Positives = 84/92 (91%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
K DY+HVRA+RGQAT+SHSLAER+RR+KISERMK LQDLVPGCNKITGKA MLDEIINYV
Sbjct: 132 KEDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYV 191
Query: 158 QSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
QSLQRQVEFLSMKLA VNP L F+++ + +K+
Sbjct: 192 QSLQRQVEFLSMKLATVNPELGFDIEQIISKQ 223
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 132/229 (57%), Gaps = 43/229 (18%)
Query: 3 GQQVKPDPAFENGWPDLGK-----IVAPAAGYGFGP-GFEASYAIS--------RTSSS- 47
GQQ P+ G LG P GY GP GF+A Y++ R+SS
Sbjct: 4 GQQSDQGPSVNGGTEFLGGNWNSVATHPKMGYNSGPYGFQA-YSMELEERPGPYRSSSGT 62
Query: 48 ----------PPAVVPEAVDVKGKVS------------VAALNEKVSAAVGRESFKKRK- 84
P VV + + S V +VS+ R S ++ +
Sbjct: 63 FSQNIQLSVEPSGVVKKRKGIDDCTSLLNPSASSRMQNVGDQQTEVSSQTERNSLEENRT 122
Query: 85 -ADKVQNTKAS---EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
+ K+Q+ + S + K DY+H+RA+RGQAT+SHSLAER+RR+KISERMK LQDLVPGC
Sbjct: 123 ISPKMQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGC 182
Query: 141 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
+KITGKA MLDEIINYVQSLQRQVEFLSMKLA VNP L F+++ + +K+
Sbjct: 183 SKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPELGFDIEQILSKQ 231
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 82/126 (65%), Positives = 92/126 (73%), Gaps = 5/126 (3%)
Query: 69 EKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISE 128
E+ +A G S K+KA K + DYIHVRARRGQATDSHSLAERVRRE+ISE
Sbjct: 102 EEGTARGGATSKNKKKASGSDAPKET-----DYIHVRARRGQATDSHSLAERVRRERISE 156
Query: 129 RMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAK 188
RMKYLQ+LVPGC+KI GKA LDEIINYVQSLQRQVEFLSMKLAA PR+ + N F +
Sbjct: 157 RMKYLQELVPGCSKIMGKASTLDEIINYVQSLQRQVEFLSMKLAAAEPRMHLSSSNFFDR 216
Query: 189 EAFPVC 194
E C
Sbjct: 217 EEVHGC 222
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 77/90 (85%), Positives = 80/90 (88%)
Query: 87 KVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGK 146
K N KA E K DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC K+TGK
Sbjct: 371 KENNQKAKEFSKQDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGK 430
Query: 147 AGMLDEIINYVQSLQRQVEFLSMKLAAVNP 176
A MLDEIINYVQSLQRQVE LSMK+A+VNP
Sbjct: 431 AVMLDEIINYVQSLQRQVESLSMKVASVNP 460
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 109/178 (61%), Gaps = 15/178 (8%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DYIHVRARRGQATD HSLAERVRREKI ERMK LQDLVPGCNKITGKA M+DEIINYVQS
Sbjct: 214 DYIHVRARRGQATDRHSLAERVRREKIGERMKLLQDLVPGCNKITGKAVMVDEIINYVQS 273
Query: 160 LQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFNS 219
LQ QVEFLSMKL AVNP+L N++ A++ PS F T + P Q +
Sbjct: 274 LQCQVEFLSMKLEAVNPKLACNMEGFLARDMLE--PS-FNTAKAYPQFHQPEWLAMQVGT 330
Query: 220 LQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQN 277
+ C G N ++ LRR ++ E D+ S+ WD +LQN
Sbjct: 331 SCEMEEQCMG------NARQVALRRIMNENSPLIEGCGDAKI------SNVWDDELQN 376
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 124/193 (64%), Gaps = 19/193 (9%)
Query: 16 WPDLGKIVAPAAGY--GFGPGFEASYAISRTSSSPPAVVPEAVDVKGKVS---------- 63
WPDLG + G G G E+S + S S + +D G +
Sbjct: 37 WPDLGAMCGANLGVPAMAGNGNESSCSGSGGSRKRKPDAYDGLDATGGANDMSKRPRGKR 96
Query: 64 VAALNEKVSAAVGRE------SFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSL 117
++ ++E V+ G++ + KK +A A+ K DYIHVRARRGQATDSHSL
Sbjct: 97 LSGISEIVAPGKGKQERPKAGTKKKAEAASAAAAAAAAGHKTDYIHVRARRGQATDSHSL 156
Query: 118 AERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPR 177
AERVRRE+ISERM+YLQ+LVPGC+K+TGKAGMLDEIINYVQSLQ+QVEFLSMK+AA NP
Sbjct: 157 AERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPV 216
Query: 178 LDFN-VDNLFAKE 189
+ F+ V++LF ++
Sbjct: 217 VSFDIVEDLFGRQ 229
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 124/193 (64%), Gaps = 19/193 (9%)
Query: 16 WPDLGKIVAPAAGY--GFGPGFEASYAISRTSSSPPAVVPEAVDVKGKVS---------- 63
WPDLG + G G G E+S + S S + +D G +
Sbjct: 37 WPDLGAMCGANLGVPAMAGNGNESSCSGSGGSRKRKPDAYDGLDATGGANDMSKRPRGKR 96
Query: 64 VAALNEKVSAAVGRE------SFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSL 117
++ ++E V+ G++ + KK +A A+ K DYIHVRARRGQATDSHSL
Sbjct: 97 LSGISEIVAPGKGKQERPKAGTKKKAEAASAAAAAAAAGHKTDYIHVRARRGQATDSHSL 156
Query: 118 AERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPR 177
AERVRRE+ISERM+YLQ+LVPGC+K+TGKAGMLDEIINYVQSLQ+QVEFLSMK+AA NP
Sbjct: 157 AERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPV 216
Query: 178 LDFN-VDNLFAKE 189
+ F+ V++LF ++
Sbjct: 217 VSFDIVEDLFGRQ 229
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 124/193 (64%), Gaps = 19/193 (9%)
Query: 16 WPDLGKIVAPAAGY--GFGPGFEASYAISRTSSSPPAVVPEAVDVKGKVS---------- 63
WPDLG + G G G E+S + S S + +D G +
Sbjct: 37 WPDLGAMCGANLGVPAMAGNGNESSCSGSGGSRKRKPDAYDGLDATGGANDMSKRPRGKR 96
Query: 64 VAALNEKVSAAVGRE------SFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSL 117
++ ++E V+ G++ + KK +A A+ K DYIHVRARRGQATDSHSL
Sbjct: 97 LSGISEIVAPGKGKQERPKAGTKKKAEAASAAAAAAAAGHKTDYIHVRARRGQATDSHSL 156
Query: 118 AERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPR 177
AERVRRE+ISERM+YLQ+LVPGC+K+TGKAGMLDEIINYVQSLQ+QVEFLSMK+AA NP
Sbjct: 157 AERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPV 216
Query: 178 LDFN-VDNLFAKE 189
+ F+ V++LF ++
Sbjct: 217 VSFDIVEDLFGRQ 229
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 95/128 (74%), Gaps = 5/128 (3%)
Query: 90 NTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 149
N ++ E K DYIHVRARRGQAT+SHSLAERVRREKISERM+ LQ+LVPGCNKITGKA M
Sbjct: 226 NPQSGEAPKDDYIHVRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVM 285
Query: 150 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTH 209
LDEIINYVQSLQ+QVEFLSMKLA VNP L +V+ + +K+ N +G S
Sbjct: 286 LDEIINYVQSLQQQVEFLSMKLATVNPELYNDVEKIQSKDILHSRGGNAAILGFS----- 340
Query: 210 PAAYLHQF 217
P HQ+
Sbjct: 341 PGINSHQY 348
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 112/177 (63%), Gaps = 21/177 (11%)
Query: 15 GWPDLGKIVAPAAGYGFGPGFEASYAISRTSSSPPAVV-PEAVDVKGKVSVAALNEKVSA 73
GWP + + G GFG +A+S SS P V P A V+ +V+
Sbjct: 80 GWPATSDVSPTSQGVGFG----GVWAMSEASSGPSTVRHPWAGGVR---------LRVNG 126
Query: 74 AVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYL 133
+ S KK K K + K +IHVRARRGQATD HSLAER RREKIS RMK+L
Sbjct: 127 VLPGHSGKKVK-------KKEQPPKQGFIHVRARRGQATDGHSLAERARREKISNRMKFL 179
Query: 134 QDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEA 190
Q LVPGC+++TGKA ML+EIINYV+SLQRQ+EFLSMKLAAV+PR+D NV+ L EA
Sbjct: 180 QALVPGCSEVTGKAVMLEEIINYVKSLQRQIEFLSMKLAAVDPRVDTNVEGLLKMEA 236
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 127/209 (60%), Gaps = 30/209 (14%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
K DY+H+RA+RGQAT+SHSLAER+RR+KISERMK LQDLVPGC+KITGKA MLDEIINYV
Sbjct: 100 KEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYV 159
Query: 158 QSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGM---SSEMTHPAAYL 214
QSLQRQVEFLSMKLA VNP L F+++ + +K+ + G+ SS +T P
Sbjct: 160 QSLQRQVEFLSMKLATVNPELGFDIEQIISKQMLLSQDRHLAFYGVEPGSSGLTGP---- 215
Query: 215 HQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFI-DSSCYPHLQPSSNWDS 273
FN GI+ P L TI+ PV I D+S H+ S W+
Sbjct: 216 --FNQ-------------GIMQPE---LMCTIANPVDVLHGAIHDASTMNHI--PSMWEG 255
Query: 274 DLQNFYNVASFPS-QQFTGTLEASNLKME 301
LQN + P +GT + ++K+E
Sbjct: 256 -LQNMPQMNFNPGVAADSGTNNSGSMKIE 283
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/104 (75%), Positives = 86/104 (82%), Gaps = 2/104 (1%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
QN+K SE K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA
Sbjct: 131 QNSKISEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 190
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN--VDNLFAKEA 190
+LDEIINY+QSLQRQVEFLSMKL AVN R+ N V+ K+A
Sbjct: 191 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMGMNPTVEGFHPKDA 234
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 102/132 (77%), Gaps = 7/132 (5%)
Query: 61 KVSVAALNEKVSAAVGRESFKKRKADKVQNTKAS---EVQKHDYIHVRARRGQATDSHSL 117
+ V++ E++S E ++ K+Q+ + S + K DY+HVRA+RGQAT+SHSL
Sbjct: 105 QTEVSSQQERISM----EEDNQKSCSKMQSKEDSSDGDGTKEDYVHVRAKRGQATNSHSL 160
Query: 118 AERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPR 177
AER+RR+KISERMK LQDLVPGC+KITGKA MLDEIINYVQSLQRQVEFLSMKLA VNP
Sbjct: 161 AERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPE 220
Query: 178 LDFNVDNLFAKE 189
L F+++ + +K+
Sbjct: 221 LSFDIEQILSKQ 232
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/125 (64%), Positives = 93/125 (74%), Gaps = 12/125 (9%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DY+HVRARRGQATDSHSLAERVRREKIS+RMK+LQDLVPGCNK+ GKA MLDEIINYVQS
Sbjct: 154 DYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQS 213
Query: 160 LQRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFN 218
LQ+QVEFLSMKLA VNP LDF N+ L K+ + ++ A YLH +
Sbjct: 214 LQQQVEFLSMKLATVNPELDFSNLSTLLHKD-----------VSLTHTSISDALYLHIKS 262
Query: 219 SLQQQ 223
+L +
Sbjct: 263 ALDTR 267
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/125 (64%), Positives = 93/125 (74%), Gaps = 12/125 (9%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DY+HVRARRGQATDSHSLAERVRREKIS+RMK+LQDLVPGCNK+ GKA MLDEIINYVQS
Sbjct: 152 DYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQS 211
Query: 160 LQRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFN 218
LQ+QVEFLSMKLA VNP LDF N+ L K+ + ++ A YLH +
Sbjct: 212 LQQQVEFLSMKLATVNPELDFSNLSTLLHKD-----------VSLTHTSISDALYLHIKS 260
Query: 219 SLQQQ 223
+L +
Sbjct: 261 ALDTR 265
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/149 (55%), Positives = 102/149 (68%), Gaps = 15/149 (10%)
Query: 74 AVGRESFKKRKADK--VQN-------------TKASEVQKHDYIHVRARRGQATDSHSLA 118
+GR+ +K+KA++ V N ++ E K DYIHVRA+RGQAT+SHSLA
Sbjct: 201 CLGRQDERKQKAEQKIVANNCGKLIGAEVKMSSQTGEAPKEDYIHVRAKRGQATNSHSLA 260
Query: 119 ERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
ERVRRE+ISERMK+LQDLVPGCNKITGKA MLDEIINYVQSLQRQVEFLSMKLA V P +
Sbjct: 261 ERVRRERISERMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVYPEM 320
Query: 179 DFNVDNLFAKEAFPVCPSNFPTIGMSSEM 207
+ ++ + + + P +G M
Sbjct: 321 NVQIERILSSDIHHSKGGTAPILGFGPGM 349
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/93 (83%), Positives = 84/93 (90%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
K YIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVP C+K+TGKA MLDEIINYV
Sbjct: 19 KQHYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPSCSKVTGKAVMLDEIINYV 78
Query: 158 QSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEA 190
QSLQRQ+EFLSMKLAAV+PRLD N+ NL KE
Sbjct: 79 QSLQRQIEFLSMKLAAVDPRLDINLLNLLNKEV 111
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/105 (72%), Positives = 85/105 (80%), Gaps = 6/105 (5%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
+ +K +E K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA
Sbjct: 127 EESKPAEQSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 186
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPV 193
+LDEIINY+QSLQRQVEFLSMKL AVN R++ V E FP+
Sbjct: 187 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNHTV------EGFPL 225
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/105 (72%), Positives = 85/105 (80%), Gaps = 6/105 (5%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
+ +K +E K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA
Sbjct: 142 EESKPAEQSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 201
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPV 193
+LDEIINY+QSLQRQVEFLSMKL AVN R++ V E FP+
Sbjct: 202 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNHTV------EGFPL 240
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/124 (63%), Positives = 95/124 (76%), Gaps = 6/124 (4%)
Query: 78 ESFKKRKADKVQNT------KASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMK 131
+S KK K D+ + T + E K YIH+RARRGQAT+SHSLAERVRREKISERM+
Sbjct: 16 QSQKKHKNDQSKETMNKESSQNEEEPKEKYIHMRARRGQATNSHSLAERVRREKISERMR 75
Query: 132 YLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAF 191
LQ+LVPGCNKITGKA MLDEIINY+QSLQ+QVEFLSMKLA VNP ++ ++D + AK+
Sbjct: 76 LLQELVPGCNKITGKAFMLDEIINYIQSLQQQVEFLSMKLATVNPDINIDIDRILAKDVR 135
Query: 192 PVCP 195
P
Sbjct: 136 AQNP 139
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/92 (77%), Positives = 84/92 (91%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
K +Y+H+RA+RGQAT+SHSLAER+RR+KISERMK LQDLVPGCNKITGKA MLDEIINYV
Sbjct: 132 KENYVHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYV 191
Query: 158 QSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
QSLQRQVEFLSMKLA VNP L F+++ + +K+
Sbjct: 192 QSLQRQVEFLSMKLATVNPELGFDIEQILSKQ 223
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 105/147 (71%), Gaps = 5/147 (3%)
Query: 59 KGKVSVAALNEKVSAAVGRESFKKRKADKVQN-TKASEVQKHDYIHVRARRGQATDSHSL 117
+G + L ++ +A+V + + V++ T+ E K DYIHVRARRGQATDSHSL
Sbjct: 28 RGHFDLLNLEQRAAASVRKHEAEPSSGKHVEHKTQPPEPSKQDYIHVRARRGQATDSHSL 87
Query: 118 AERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPR 177
AER RREKISERMK LQDLVPGCNK+ GKA +LDEIINY+QSLQRQVEFLSMKL AVN R
Sbjct: 88 AERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNTR 147
Query: 178 LDFNVDNLFAKEAFPVCPSNFPTIGMS 204
++ ++ +FA + F F T GM+
Sbjct: 148 MNPGIE-VFASKDF---GQTFDTAGMA 170
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats.
Identities = 75/83 (90%), Positives = 80/83 (96%)
Query: 99 HDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQ 158
DYIHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGC+KITGKA ML+EIINYVQ
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQ 60
Query: 159 SLQRQVEFLSMKLAAVNPRLDFN 181
SLQRQ+EFLSMKLAAV+PRLD N
Sbjct: 61 SLQRQIEFLSMKLAAVDPRLDIN 83
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 105/178 (58%), Gaps = 55/178 (30%)
Query: 38 SYAISRTSSSPPAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADK---------- 87
S +ISRT S PPA+V + K K + ++VG++ FKKRK DK
Sbjct: 24 SSSISRTFSWPPALVEPESESKPKP------KPTDSSVGKDGFKKRKPDKPHHPKVVAEN 77
Query: 88 -------------------------------------VQNTKASEVQKHDYIHVRARRGQ 110
N+KASE K DYIHVRARRGQ
Sbjct: 78 DNKDKRIKFGSDDGESKITKSNTTNTNTNNNKETCAETSNSKASE--KPDYIHVRARRGQ 135
Query: 111 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
ATDSHSLAERVRREKISERMKYLQDLVPGCNK+TGKAGMLDEIINYVQSLQRQVEFLS
Sbjct: 136 ATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFLS 193
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/103 (73%), Positives = 85/103 (82%), Gaps = 2/103 (1%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
Q+ K E K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA
Sbjct: 124 QSNKPCEAPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 183
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN--VDNLFAKE 189
+LDEIINY+QSLQRQVEFLSMKL AVN R++ N +D +K+
Sbjct: 184 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNMNPTIDGFPSKD 226
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 101/136 (74%), Gaps = 4/136 (2%)
Query: 58 VKGKVSVAALNEKVS-AAVGRESFKKRKADKVQNTK--ASEVQKHDYIHVRARRGQATDS 114
V+ KV A S + G E +K+ KV +K A++ DY+HVRARRGQATDS
Sbjct: 19 VRPKVEEEAATATASDGSAGGERGRKQAKGKVSKSKQPAADEPPRDYVHVRARRGQATDS 78
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAV 174
HSLAERVRREKI+ +MK LQDLVPGCNK+ GKA MLDEIINYVQSLQ+QVEFLSMKL+ V
Sbjct: 79 HSLAERVRREKITLKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQQQVEFLSMKLSTV 138
Query: 175 NPRLDFN-VDNLFAKE 189
NP+LDF+ + NL K+
Sbjct: 139 NPQLDFDTLSNLLHKD 154
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 74/87 (85%), Positives = 80/87 (91%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
+N K S + K DYIHVRARRGQATDSHSLAER RREKIS++MK LQDLVPGCNKITG+AG
Sbjct: 22 ENQKTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKCLQDLVPGCNKITGRAG 81
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVN 175
MLDEIINYVQSLQRQVEF+SMKLAAVN
Sbjct: 82 MLDEIINYVQSLQRQVEFISMKLAAVN 108
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/124 (66%), Positives = 94/124 (75%), Gaps = 6/124 (4%)
Query: 85 ADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIT 144
A V+ K+ V+ DYIHVRARRGQATDSHSLAERVRREKI ERMK LQ LVP CNKIT
Sbjct: 241 AGAVEEEKSEPVK--DYIHVRARRGQATDSHSLAERVRREKIGERMKLLQSLVPSCNKIT 298
Query: 145 GKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE----AFPVCPSNFPT 200
GKA MLDEIINYVQSLQRQVEFLSMKL+ +NP+L+ + + +KE A PV PS+
Sbjct: 299 GKALMLDEIINYVQSLQRQVEFLSMKLSTMNPQLELDEQCIPSKEMNQMAVPVYPSDDRN 358
Query: 201 IGMS 204
G S
Sbjct: 359 PGFS 362
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 120/176 (68%), Gaps = 19/176 (10%)
Query: 78 ESFKKRKADKVQNTKAS---EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQ 134
E ++ + K+Q+ + S + K DY+H+RA+RGQAT+SHSLAER+RR+KISERMK LQ
Sbjct: 109 EEGNRKISPKIQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQ 168
Query: 135 DLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVC 194
DLVPGC+KITGKA MLDEIINYVQSLQRQVEFLSMKL+ VNP L F+++ + +K+
Sbjct: 169 DLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPELGFDIEQIISKQMMLSQ 228
Query: 195 PSNFPTIGM---SSEMTHPAAYLHQFN-SLQQQAVSCSGLDLGIINPSEMGLRRTI 246
+ G+ SS +T P FN + Q A+ C+ I NP+++ L TI
Sbjct: 229 DRHLAFYGVDPGSSSLTAP------FNQGIVQPAMMCN-----ISNPADV-LHGTI 272
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 70/94 (74%), Positives = 84/94 (89%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
K DY+H+RA+RGQAT+SHSLAER+RR+KISERMK LQDLVPGC+KITGKA MLDEIINYV
Sbjct: 25 KEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYV 84
Query: 158 QSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAF 191
QSLQRQVEFLSMKL+ VNP L F+++ + +K+
Sbjct: 85 QSLQRQVEFLSMKLSTVNPELGFDIEQIISKQMM 118
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 80/106 (75%), Positives = 86/106 (81%), Gaps = 8/106 (7%)
Query: 93 ASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDE 152
ASE K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA +LDE
Sbjct: 135 ASEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 194
Query: 153 IINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNF 198
IINY+QSLQRQVEFLSMKL AVN RL+ + EAFP P +F
Sbjct: 195 IINYIQSLQRQVEFLSMKLEAVNSRLNSGI------EAFP--PKDF 232
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/104 (75%), Positives = 85/104 (81%), Gaps = 6/104 (5%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
QNT+ E+ K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA
Sbjct: 123 QNTQPPELPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 182
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFP 192
+LDEIINY+QSLQRQVEFLSMKL AVN R+ + EAFP
Sbjct: 183 VLDEIINYIQSLQRQVEFLSMKLEAVNTRMTPGI------EAFP 220
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 86/110 (78%), Gaps = 8/110 (7%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
QNT+ E K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA
Sbjct: 44 QNTQPLEAPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAS 103
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNF 198
+LDEIINY+Q+LQRQVEFLSMKL AVN R + + E FP P +F
Sbjct: 104 VLDEIINYIQALQRQVEFLSMKLEAVNSRTNSGI------EGFP--PKDF 145
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 76/123 (61%), Positives = 97/123 (78%), Gaps = 2/123 (1%)
Query: 79 SFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVP 138
S KKRK+ + + + +K Y+HVR RRGQATDSHSLAER RREKI+ RMK LQ+LVP
Sbjct: 177 SSKKRKS--AADETSGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVP 234
Query: 139 GCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNF 198
GC+KI+G A +LDEIIN+VQSLQRQVE LSMKLAAVNPR+DF++D+L A + + +N
Sbjct: 235 GCDKISGTAMVLDEIINHVQSLQRQVEILSMKLAAVNPRIDFSLDSLLATDGASLMDNNL 294
Query: 199 PTI 201
P++
Sbjct: 295 PSM 297
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/106 (72%), Positives = 86/106 (81%)
Query: 84 KADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI 143
KA+ + K +E K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+
Sbjct: 124 KAEGEETAKPAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 183
Query: 144 TGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
GKA +LDEIINY+QSLQRQVEFLSMKL AVN RL ++ +KE
Sbjct: 184 IGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLSPGIEGFPSKE 229
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/100 (73%), Positives = 85/100 (85%)
Query: 93 ASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDE 152
A E QK Y+HVRAR QAT+SHS+AE++RREKISERMK LQDLVPGC+K+TGKA MLDE
Sbjct: 137 AGERQKEGYVHVRARSEQATNSHSIAEKLRREKISERMKLLQDLVPGCSKVTGKAVMLDE 196
Query: 153 IINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFP 192
IINYVQSLQRQVEFLSMKL+ VNPRL +++ L AK+ P
Sbjct: 197 IINYVQSLQRQVEFLSMKLSTVNPRLGVDIELLLAKDILP 236
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 97/134 (72%), Gaps = 10/134 (7%)
Query: 48 PPAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRAR 107
P V A+ + +V+ +++ +A + ++ K + V+ DYIHVRAR
Sbjct: 201 PATAVTNAIPKRPRVTDGGSSDENAAVPAKVELEEEKPEPVK----------DYIHVRAR 250
Query: 108 RGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
RGQATDSHSLAERVRR++ISERMK LQ LVPGCNKITGKA MLDEIINYVQSLQRQVEFL
Sbjct: 251 RGQATDSHSLAERVRRKRISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFL 310
Query: 168 SMKLAAVNPRLDFN 181
SMKL+ +NP+LD +
Sbjct: 311 SMKLSTMNPQLDLD 324
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/90 (83%), Positives = 79/90 (87%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
+N+K DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGC+K+TGKA
Sbjct: 18 ENSKPGAGNTQDYIHVRARRGQATDSHSLAERVRREKISERMKTLQDLVPGCSKVTGKAM 77
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
MLDEIINYVQSLQRQVEFLSMKLAAV P L
Sbjct: 78 MLDEIINYVQSLQRQVEFLSMKLAAVKPAL 107
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 113/177 (63%), Gaps = 7/177 (3%)
Query: 33 PGFEASYAISRTSSSPPAVVPEAVDVKGKVSVAALNEKVSAAVGRES---FKKRKADKVQ 89
P + S I TSS A EA +KG S NE ++ E+ + AD Q
Sbjct: 60 PSEDESSKIMSTSSGNDATDSEAKRLKGMKSGDG-NENSNSKTEAEASSGLCNKLAD--Q 116
Query: 90 NTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 149
+ + SE K DYIHVRARRGQATDSHSLAER RREKISERM LQDLVPGCNK+ GKA +
Sbjct: 117 SNQPSEAPKQDYIHVRARRGQATDSHSLAERARREKISERMNILQDLVPGCNKVIGKASV 176
Query: 150 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSE 206
LDEIINY+Q+LQRQVEFLSMKL AVN +++ ++ F + F P++ SS+
Sbjct: 177 LDEIINYIQALQRQVEFLSMKLEAVNSQMNPGIEG-FPPKDFGAQAYETPSLAFSSQ 232
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/149 (57%), Positives = 98/149 (65%), Gaps = 9/149 (6%)
Query: 50 AVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRG 109
A AVD G + S GRE+ + A++ SE K DYIHVRARRG
Sbjct: 80 ASTTNAVDEGGGGDGKRIKASESGEGGRENSSGKPAEQ-SGKPPSEPPKQDYIHVRARRG 138
Query: 110 QATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
QATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA +LDEIINY+QSLQRQ EFLSM
Sbjct: 139 QATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLQRQAEFLSM 198
Query: 170 KLAAVNPRLDFNVDNLFAKEAFPVCPSNF 198
KL AVN R++ + E FP P +F
Sbjct: 199 KLEAVNSRMESGI------EVFP--PKDF 219
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/84 (85%), Positives = 80/84 (95%)
Query: 97 QKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 156
QK DYIHVRARRGQATDSHSLAERVRRE+ISERM+YLQ+LVPGC+K+TGKAGMLDEIINY
Sbjct: 139 QKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINY 198
Query: 157 VQSLQRQVEFLSMKLAAVNPRLDF 180
VQSLQ+QVEFLSMK+AA NP + F
Sbjct: 199 VQSLQKQVEFLSMKIAASNPVVSF 222
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/117 (64%), Positives = 88/117 (75%)
Query: 95 EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 154
E +K Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ+LVPGC+KI G A +LDEII
Sbjct: 191 ETEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEII 250
Query: 155 NYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPA 211
N+VQSLQRQVE LSM+LAAVNPR+DFN+D + A E + +F M H A
Sbjct: 251 NHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASENGSLMDGSFNGTAMQLAWPHQA 307
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/146 (58%), Positives = 100/146 (68%), Gaps = 2/146 (1%)
Query: 36 EASYAISRTSSSPPAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASE 95
E+S +S T+S+ +K VS A V S K DK N+K +E
Sbjct: 27 ESSKIVSTTTSANELNDSNGKRMKTPVSKNGNTGSKEAEVEASSADGSKPDK--NSKPAE 84
Query: 96 VQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIIN 155
K DYIHVRARRGQATDSHSLAER RRE+ISERMK LQDLVPGCNK+ GKA +LDEIIN
Sbjct: 85 PPKQDYIHVRARRGQATDSHSLAERARRERISERMKILQDLVPGCNKVIGKALVLDEIIN 144
Query: 156 YVQSLQRQVEFLSMKLAAVNPRLDFN 181
Y+QSLQ+QVEFLSMKL AVN R++ N
Sbjct: 145 YIQSLQQQVEFLSMKLEAVNSRINVN 170
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/104 (69%), Positives = 85/104 (81%)
Query: 97 QKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 156
+K Y+HVR RRGQATDSHSLAER RREKI+ RMK LQ+LVPGC KI+G A +LDEIIN+
Sbjct: 166 EKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINH 225
Query: 157 VQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPT 200
VQ+LQRQVE LSMKLAAVNPR+DFN+D L A + + SN P+
Sbjct: 226 VQTLQRQVEILSMKLAAVNPRIDFNLDRLLAADGSSLMDSNLPS 269
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 85/110 (77%), Gaps = 8/110 (7%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
QN E K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA
Sbjct: 121 QNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAS 180
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNF 198
+LDEIINY+Q+LQRQVEFLSMKL AVN ++ + EAFP P +F
Sbjct: 181 VLDEIINYIQALQRQVEFLSMKLEAVNAHVNNGI------EAFP--PKDF 222
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 85/110 (77%), Gaps = 8/110 (7%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
QN E K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA
Sbjct: 121 QNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAS 180
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNF 198
+LDEIINY+Q+LQRQVEFLSMKL AVN ++ + EAFP P +F
Sbjct: 181 VLDEIINYIQALQRQVEFLSMKLEAVNAHVNNGI------EAFP--PKDF 222
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 85/110 (77%), Gaps = 8/110 (7%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
QN E K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA
Sbjct: 119 QNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAS 178
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNF 198
+LDEIINY+Q+LQRQVEFLSMKL AVN ++ + EAFP P +F
Sbjct: 179 VLDEIINYIQALQRQVEFLSMKLEAVNAHVNNGI------EAFP--PKDF 220
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 71/105 (67%), Positives = 88/105 (83%)
Query: 97 QKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 156
+K Y+HVR RRGQATDSHSLAER RREKI+ RMK LQ+LVPGC+KI+G A +LDEIIN+
Sbjct: 199 EKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINH 258
Query: 157 VQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTI 201
VQSLQRQVE LSMKLAAVNPR+DF++D+L A + + +N P++
Sbjct: 259 VQSLQRQVEILSMKLAAVNPRIDFSLDSLLATDGASLMDNNLPSM 303
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 85/110 (77%), Gaps = 8/110 (7%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
QN E K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA
Sbjct: 80 QNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAS 139
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNF 198
+LDEIINY+Q+LQRQVEFLSMKL AVN ++ + EAFP P +F
Sbjct: 140 VLDEIINYIQALQRQVEFLSMKLEAVNAHVNNGI------EAFP--PKDF 181
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 75/103 (72%), Positives = 84/103 (81%), Gaps = 2/103 (1%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
Q+ K E K DYIHVRARRGQATDSHSLAER RREKISERMK LQDL PGCNK+ GKA
Sbjct: 99 QSNKPCEAPKPDYIHVRARRGQATDSHSLAERARREKISERMKILQDLAPGCNKVIGKAL 158
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN--VDNLFAKE 189
+LDEIINY+QSLQRQVEFLSMKL AVN R++ N +D +K+
Sbjct: 159 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNTNPTIDGFPSKD 201
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 78/106 (73%), Positives = 85/106 (80%), Gaps = 6/106 (5%)
Query: 89 QNTKASEVQ--KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGK 146
Q+TK SE + K DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPGCNK+ GK
Sbjct: 102 QSTKPSESEPPKQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGK 161
Query: 147 AGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFP 192
A +LDEIINY+QSLQ QVEFLSMKL AVN R + N N E FP
Sbjct: 162 ALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANMNPTN----EGFP 203
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/101 (71%), Positives = 86/101 (85%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
QN ++++ K D+IHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA
Sbjct: 67 QNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 126
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
+LDEIINY+QSLQRQVEFLSMKL AVN R++ ++ +K+
Sbjct: 127 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNSGIEGFPSKD 167
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/101 (71%), Positives = 86/101 (85%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
QN ++++ K D+IHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA
Sbjct: 136 QNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 195
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
+LDEIINY+QSLQRQVEFLSMKL AVN R++ ++ +K+
Sbjct: 196 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNSGIEGFPSKD 236
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/95 (73%), Positives = 84/95 (88%)
Query: 95 EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 154
E +K Y+HVRARRGQATDSHSLAER RREKI++RMK LQ+LVPGCNKI+G A +LDEII
Sbjct: 173 EEEKLPYVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEII 232
Query: 155 NYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
N+VQ LQRQVE LSM+LAAVNPR+DFN+D++ + E
Sbjct: 233 NHVQFLQRQVEILSMRLAAVNPRIDFNLDSMLSAE 267
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/101 (71%), Positives = 86/101 (85%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
QN ++++ K D+IHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA
Sbjct: 136 QNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 195
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
+LDEIINY+QSLQRQVEFLSMKL AVN R++ ++ +K+
Sbjct: 196 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNSGIEGFPSKD 236
>gi|357440189|ref|XP_003590372.1| Transcription factor BEE [Medicago truncatula]
gi|355479420|gb|AES60623.1| Transcription factor BEE [Medicago truncatula]
Length = 326
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 83/99 (83%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
Y+HVR RRGQATDSHSLAER RREKI+ RMK LQ+LVPGCNKI+G A +LD+IIN+VQSL
Sbjct: 157 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSL 216
Query: 161 QRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFP 199
Q +VE LSMKLAAVNP +DFN+D++ A E + SNFP
Sbjct: 217 QHEVEILSMKLAAVNPIIDFNLDSILAAEGMSLMDSNFP 255
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/95 (74%), Positives = 82/95 (86%)
Query: 95 EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 154
E +K Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ+LVPGC+KI G A +LDEII
Sbjct: 195 ENEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEII 254
Query: 155 NYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
N+VQSLQRQVE LSM+LAAVNPR+DFN+D + A E
Sbjct: 255 NHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASE 289
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/95 (74%), Positives = 82/95 (86%)
Query: 95 EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 154
E +K Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ+LVPGC+KI G A +LDEII
Sbjct: 195 ENEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEII 254
Query: 155 NYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
N+VQSLQRQVE LSM+LAAVNPR+DFN+D + A E
Sbjct: 255 NHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASE 289
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/106 (68%), Positives = 86/106 (81%), Gaps = 3/106 (2%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
K +IHVRARRGQAT+SHSLAER RREKIS RMK+LQ LVPGC+++TGKA ML+EIINYV
Sbjct: 13 KQGFIHVRARRGQATNSHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYV 72
Query: 158 QSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGM 203
+SLQRQ+EFLSMKLAAV+PRLD NV+ L E VC ++ M
Sbjct: 73 KSLQRQIEFLSMKLAAVDPRLDTNVEGLLKME---VCAVRLVSVPM 115
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 98/139 (70%), Gaps = 5/139 (3%)
Query: 44 TSSSPPAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIH 103
T+++P + PE + + K+S A ++ G K K + K DYIH
Sbjct: 223 TTATPKSREPETMAKRRKLSTDAARDEA----GSHGNGKGKEVAPAAEPEPQPPK-DYIH 277
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATDSHSLAERVRREKISERMK LQDLVPGC+K+TGKA MLDEIINYVQSLQ Q
Sbjct: 278 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQ 337
Query: 164 VEFLSMKLAAVNPRLDFNV 182
VEFLSMKL+ V+PR + +V
Sbjct: 338 VEFLSMKLSTVDPRRELDV 356
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/122 (62%), Positives = 96/122 (78%), Gaps = 3/122 (2%)
Query: 62 VSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERV 121
V V L + ++A+ RE + +K + +A ++ DY+HVRA+RGQAT+SHSLAER
Sbjct: 89 VHVNVLLQGETSALQREVSMECADEKAGDARA---KREDYVHVRAKRGQATNSHSLAERF 145
Query: 122 RREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 181
RREKI+ERMK LQDLVPGCNKITGKA MLDEIINYVQSLQRQ+EFLSMKL+A+ P L+ +
Sbjct: 146 RREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFLSMKLSAIGPGLNCD 205
Query: 182 VD 183
+D
Sbjct: 206 LD 207
>gi|119655907|gb|ABL86246.1| BHLHogu [Brassica rapa subsp. chinensis]
Length = 122
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/114 (67%), Positives = 90/114 (78%), Gaps = 1/114 (0%)
Query: 77 RESFKKRKADKVQNTKASEVQ-KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
+E KK K +K+SE K Y+HVRARRGQATDSHSLAER RREKI+ RMK L++
Sbjct: 5 KELDKKVKGSTKMKSKSSEENGKLPYVHVRARRGQATDSHSLAERARREKINARMKLLRE 64
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
LVPGC+KI G A +LDEIIN+VQSLQRQVE LSM+LAAVNPR+DFN+D L A E
Sbjct: 65 LVPGCDKIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTLLASE 118
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 98/139 (70%), Gaps = 5/139 (3%)
Query: 44 TSSSPPAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIH 103
T+++P + PE + + K+S A ++ G K K + K DYIH
Sbjct: 203 TTATPKSREPETMAKRRKLSTDAARDEA----GSHGNGKGKEVAPAAEPEPQPPK-DYIH 257
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATDSHSLAERVRREKISERMK LQDLVPGC+K+TGKA MLDEIINYVQSLQ Q
Sbjct: 258 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQ 317
Query: 164 VEFLSMKLAAVNPRLDFNV 182
VEFLSMKL+ V+PR + +V
Sbjct: 318 VEFLSMKLSTVDPRRELDV 336
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/101 (73%), Positives = 83/101 (82%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
+N A+E K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA
Sbjct: 111 KNIPAAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKAS 170
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
+LDEIINY+QSLQ QVEFLSMKL AVN + + V+ AK+
Sbjct: 171 VLDEIINYIQSLQCQVEFLSMKLEAVNAQANQGVEVFPAKD 211
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 81/87 (93%)
Query: 97 QKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 156
++ DY+HVRA+RGQAT+SHSLAER RREKI+ERMK LQDLVPGCNKITGKA MLDEIINY
Sbjct: 116 KREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 175
Query: 157 VQSLQRQVEFLSMKLAAVNPRLDFNVD 183
VQSLQRQVEFLSMKL+A++P L+ ++D
Sbjct: 176 VQSLQRQVEFLSMKLSAISPELNCDLD 202
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/101 (75%), Positives = 81/101 (80%), Gaps = 6/101 (5%)
Query: 93 ASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDE 152
A+E K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA +LDE
Sbjct: 113 AAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDE 172
Query: 153 IINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPV 193
IINY+QSLQ QVEFLSMKL AVN + V EAFPV
Sbjct: 173 IINYIQSLQCQVEFLSMKLEAVNAHANQGV------EAFPV 207
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 121/191 (63%), Gaps = 28/191 (14%)
Query: 77 RESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 136
RE + +K + AS + +Y+HVRA+RGQAT+SHSLAER RREKI+ERMK LQDL
Sbjct: 604 RELSMEHAGEKAGDADAS---REEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDL 660
Query: 137 VPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL--DFNVDNLF----AKEA 190
VPGCNKITGKA MLDEIINYVQSLQRQVEFLSMKL+ ++P L D ++ ++ A+ A
Sbjct: 661 VPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISPELNSDLDLQDILCSQDARSA 720
Query: 191 FPVCPSNFPTIGMSSEMT--HPAAYLHQFNSLQQQAVSCSGL--DLGIINPSEMGLRRTI 246
F +G S +++ HP Y QQ +S GL + + NP+++ L R
Sbjct: 721 F---------LGCSPQLSNAHPNLY-----RAAQQCLSPPGLYGSVCVPNPADVHLARA- 765
Query: 247 SAPVSAPETFI 257
S P+ +I
Sbjct: 766 GHLASFPQVYI 776
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 86/110 (78%), Gaps = 3/110 (2%)
Query: 94 SEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEI 153
SE K DYIHVRARRGQATDSHSLAER RREKISERMK LQD+VPGCNK+ GKA +LDEI
Sbjct: 127 SEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEI 186
Query: 154 INYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGM 203
INY+QSLQRQVEFLSMKL AVN RL ++ +F + F F T GM
Sbjct: 187 INYIQSLQRQVEFLSMKLEAVNSRLAPRIE-VFPPKDFDQ--QTFDTTGM 233
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 116/178 (65%), Gaps = 27/178 (15%)
Query: 77 RESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 136
RE + +K + AS + +Y+HVRA+RGQAT+SHSLAER RREKI+ERMK LQDL
Sbjct: 604 RELSMEHAGEKAGDADAS---REEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDL 660
Query: 137 VPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL--DFNVDNLF----AKEA 190
VPGCNKITGKA MLDEIINYVQSLQRQVEFLSMKL+ ++P L D ++ ++ A+ A
Sbjct: 661 VPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISPELNSDLDLQDILCSQDARSA 720
Query: 191 FPVCPSNFPTIGMSSEMT--HPAAYLHQFNSLQQQAVSCSGL--DLGIINPSEMGLRR 244
F +G S +++ HP Y QQ +S GL + + NP+++ L R
Sbjct: 721 F---------LGCSPQLSNAHPNLY-----RAAQQCLSPPGLYGSVCVPNPADVHLAR 764
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/121 (62%), Positives = 97/121 (80%), Gaps = 5/121 (4%)
Query: 63 SVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVR 122
S+ +L E ++A+ RE + +K + +A ++ DY+HVRA+RGQAT+SHSLAER R
Sbjct: 88 SLRSLGE--TSALQREVSMECADEKAGDARA---KREDYVHVRAKRGQATNSHSLAERFR 142
Query: 123 REKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNV 182
REKI+ERMK LQDLVPGCNKITGKA MLDEIINYVQSLQRQ+EFLSMKL+A+ P L+ ++
Sbjct: 143 REKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFLSMKLSAIGPGLNCDL 202
Query: 183 D 183
D
Sbjct: 203 D 203
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 116/178 (65%), Gaps = 27/178 (15%)
Query: 77 RESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 136
RE + +K + AS + +Y+HVRA+RGQAT+SHSLAER RREKI+ERMK LQDL
Sbjct: 604 RELSMEHAGEKAGDADAS---REEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDL 660
Query: 137 VPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL--DFNVDNLF----AKEA 190
VPGCNKITGKA MLDEIINYVQSLQRQVEFLSMKL+ ++P L D ++ ++ A+ A
Sbjct: 661 VPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISPELNSDLDLQDILCSQDARSA 720
Query: 191 FPVCPSNFPTIGMSSEMT--HPAAYLHQFNSLQQQAVSCSGL--DLGIINPSEMGLRR 244
F +G S +++ HP Y QQ +S GL + + NP+++ L R
Sbjct: 721 F---------LGCSPQLSNAHPNLY-----RAAQQCLSPPGLYGSVCVPNPADVHLAR 764
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/104 (68%), Positives = 85/104 (81%)
Query: 95 EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 154
E K Y+HVRARRGQATD+HSLAER RREKI+ RMK LQ+LVPGC+KI G A +LDEII
Sbjct: 175 ESDKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEII 234
Query: 155 NYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNF 198
N+VQSLQRQVE LSM+LAAVNPR++FN+D++ A E + NF
Sbjct: 235 NHVQSLQRQVEMLSMRLAAVNPRVEFNLDSILASENGSLMDGNF 278
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 108/154 (70%), Gaps = 12/154 (7%)
Query: 63 SVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVR 122
S+ +L E ++A+ RE + +K + +A ++ DY+HVRA+RGQAT+SHSLAER R
Sbjct: 62 SLRSLGE--TSALQREVSMECADEKAGDARA---KREDYVHVRAKRGQATNSHSLAERFR 116
Query: 123 REKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNV 182
REKI+ERMK LQDLVPGCNKITGKA MLDEIINYVQSLQRQ+EFLSMKL+A+ P L+ ++
Sbjct: 117 REKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFLSMKLSAIGPGLNCDL 176
Query: 183 ---DNLFAKEAFPVCPSNFPTIGMSSEMTHPAAY 213
D L ++A S FP + + H Y
Sbjct: 177 DLQDILCTQDA----SSAFPGYNLQTSNVHINLY 206
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/121 (62%), Positives = 97/121 (80%), Gaps = 5/121 (4%)
Query: 63 SVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVR 122
S+ +L E ++A+ RE + +K + +A ++ DY+HVRA+RGQAT+SHSLAER R
Sbjct: 88 SLRSLGE--TSALQREVSMECADEKAGDARA---KREDYVHVRAKRGQATNSHSLAERFR 142
Query: 123 REKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNV 182
REKI+ERMK LQDLVPGCNKITGKA MLDEIINYVQSLQRQ+EFLSMKL+A+ P L+ ++
Sbjct: 143 REKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFLSMKLSAIGPGLNCDL 202
Query: 183 D 183
D
Sbjct: 203 D 203
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/121 (62%), Positives = 97/121 (80%), Gaps = 5/121 (4%)
Query: 63 SVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVR 122
S+ +L E ++A+ RE + +K + +A ++ DY+HVRA+RGQAT+SHSLAER R
Sbjct: 88 SLRSLGE--TSALQREVSMECADEKAGDARA---KREDYVHVRAKRGQATNSHSLAERFR 142
Query: 123 REKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNV 182
REKI+ERMK LQDLVPGCNKITGKA MLDEIINYVQSLQRQ+EFLSMKL+A+ P L+ ++
Sbjct: 143 REKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFLSMKLSAIGPGLNCDL 202
Query: 183 D 183
D
Sbjct: 203 D 203
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/121 (62%), Positives = 97/121 (80%), Gaps = 5/121 (4%)
Query: 63 SVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVR 122
S+ +L E ++A+ RE + +K + +A ++ DY+HVRA+RGQAT+SHSLAER R
Sbjct: 62 SLRSLGE--TSALQREVSMECADEKAGDARA---KREDYVHVRAKRGQATNSHSLAERFR 116
Query: 123 REKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNV 182
REKI+ERMK LQDLVPGCNKITGKA MLDEIINYVQSLQRQ+EFLSMKL+A+ P L+ ++
Sbjct: 117 REKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIEFLSMKLSAIGPGLNCDL 176
Query: 183 D 183
D
Sbjct: 177 D 177
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/103 (68%), Positives = 83/103 (80%)
Query: 97 QKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 156
+K Y+HVR RRGQATDSHSLAER RREKI+ RMK LQ+LVPGCNKI+G A +LD+IIN+
Sbjct: 185 EKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINH 244
Query: 157 VQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFP 199
VQSLQ +VE LSMKLAAVNP +DFN+D+L A E NFP
Sbjct: 245 VQSLQNEVEILSMKLAAVNPVIDFNLDSLLATEGVTPMDCNFP 287
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 102/153 (66%), Gaps = 14/153 (9%)
Query: 37 ASYAISRTSSSPPAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEV 96
AS + + S P V KG V+ A EK ++ KAD + K ++
Sbjct: 127 ASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSP---------KADSEK--KVAKE 175
Query: 97 QKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 156
DYIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+K+TGKA MLDEIINY
Sbjct: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
Query: 157 VQSLQRQVEFLSMKLAAVNPRL-DF--NVDNLF 186
VQ LQ QVEFLSMKLA+VNP DF ++DN F
Sbjct: 236 VQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTF 268
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/138 (61%), Positives = 97/138 (70%), Gaps = 8/138 (5%)
Query: 57 DVKGKVSVAA--LNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDS 114
D GK + A+ NE V E+ + A++ S+ K DYIHVRARRGQATDS
Sbjct: 102 DSDGKRTKASGNKNEGGDGKVEGEASSGKHAEQSSKPPPSDPPKQDYIHVRARRGQATDS 161
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAV 174
HSLAER RREKISERMK LQDLVPGCNK+ GKA +LDEIINY+QSLQRQVEFLSMKL AV
Sbjct: 162 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 221
Query: 175 NPRLDFNVDNLFAKEAFP 192
N RL+ + EAFP
Sbjct: 222 NSRLNTGI------EAFP 233
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 86/110 (78%), Gaps = 3/110 (2%)
Query: 94 SEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEI 153
SE K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA +LDEI
Sbjct: 118 SEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 177
Query: 154 INYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGM 203
INY+QSLQRQVEFLSMKL AVN R+ ++ +F + F F T GM
Sbjct: 178 INYIQSLQRQVEFLSMKLEAVNSRIAPGIE-VFPPKDFDQ--QTFDTTGM 224
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/141 (60%), Positives = 98/141 (69%), Gaps = 14/141 (9%)
Query: 56 VDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHD------------YIH 103
+D K K S + K A GR +K+ ++V+ K + +K D YIH
Sbjct: 113 MDKKRKSSFNSAQSK-DARDGRGKKQKKCNNEVKEDKKPKAEKKDQKKVPDQEPPTGYIH 171
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+K+TGKA MLDEIINYVQSLQ Q
Sbjct: 172 VRARRGQATDSHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 231
Query: 164 VEFLSMKLAAVNPRL-DFNVD 183
VEFLSMKLA+VNP DF +D
Sbjct: 232 VEFLSMKLASVNPLFYDFGMD 252
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 90/128 (70%), Gaps = 8/128 (6%)
Query: 83 RKADKV--QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
R KV QN E K DYIHVRARRGQATDSHSLAER RREKI+ERMK LQDLVPGC
Sbjct: 91 RNGSKVVDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKITERMKILQDLVPGC 150
Query: 141 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPT 200
NK+ GKA +LDEIINYVQ+L+RQVEFLSMKL AVN ++ V E FP + PT
Sbjct: 151 NKVIGKASVLDEIINYVQALERQVEFLSMKLEAVNAHVNNGV------ETFPSKDFSAPT 204
Query: 201 IGMSSEMT 208
+ +T
Sbjct: 205 FNTAPGLT 212
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 111/176 (63%), Gaps = 23/176 (13%)
Query: 77 RESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 136
RE + +K + AS + +Y+HVRA+RGQAT+SHSLAER RREKI+ERMK LQDL
Sbjct: 101 RELSMEHAGEKAGDADAS---REEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDL 157
Query: 137 VPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL--DFNVDNLF----AKEA 190
VPGCNKITGKA MLDEIINYVQSLQRQVEFLSMKL+ ++P L D ++ ++ A+ A
Sbjct: 158 VPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISPELNSDLDLQDILCSQDARSA 217
Query: 191 FPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQAVSCSGL--DLGIINPSEMGLRR 244
F C HP Y QQ +S GL + + NP+++ L R
Sbjct: 218 FLGCSPQLSN-------AHPNLY-----RAAQQCLSPPGLYGSVCVPNPADVHLAR 261
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/103 (68%), Positives = 83/103 (80%)
Query: 97 QKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 156
+K Y+HVR RRGQATDSHSLAER RREKI+ RMK LQ+LVPGCNKI+G A +LD+IIN+
Sbjct: 181 EKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINH 240
Query: 157 VQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFP 199
VQSLQ +VE LSMKLAAVNP +DFN+D+L A E NFP
Sbjct: 241 VQSLQNEVEILSMKLAAVNPVIDFNLDSLLATEGVTPMDCNFP 283
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/102 (75%), Positives = 85/102 (83%), Gaps = 5/102 (4%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
YIHVRARRGQATDSHSLAERVRRE+ISERMK LQ LVPGC+KITGKA MLDEIINYVQSL
Sbjct: 171 YIHVRARRGQATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIINYVQSL 230
Query: 161 QRQVEFLSMKLAAVNPRL-DFNVDNLFAKEAFPVCPSNFPTI 201
Q QVEFLSMKLA+VNP L DF +D ++AF V P ++
Sbjct: 231 QNQVEFLSMKLASVNPLLYDFGMD----RDAFMVRPERLSSM 268
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 95/129 (73%), Gaps = 18/129 (13%)
Query: 81 KKRKADKVQNTKA--------SEVQKH------DYIHVRARRGQATDSHSLAERVRREKI 126
K++K D+V + KA +E +K DYIHVRARRGQATDSHSLAER RREKI
Sbjct: 99 KRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKI 158
Query: 127 SERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNL- 185
SERMK LQDLVPGCNK+ GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++ ++
Sbjct: 159 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIEVFP 218
Query: 186 ---FAKEAF 191
F ++AF
Sbjct: 219 PKEFGQQAF 227
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 95/129 (73%), Gaps = 18/129 (13%)
Query: 81 KKRKADKVQNTKA--------SEVQKH------DYIHVRARRGQATDSHSLAERVRREKI 126
K++K D+V + KA +E +K DYIHVRARRGQATDSHSLAER RREKI
Sbjct: 99 KRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKI 158
Query: 127 SERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNL- 185
SERMK LQDLVPGCNK+ GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++ ++
Sbjct: 159 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIEVFP 218
Query: 186 ---FAKEAF 191
F ++AF
Sbjct: 219 PKEFGQQAF 227
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 74/93 (79%), Positives = 80/93 (86%), Gaps = 1/93 (1%)
Query: 92 KASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLD 151
KA+E YIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+K+TGKA MLD
Sbjct: 152 KANEEAPTGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLD 211
Query: 152 EIINYVQSLQRQVEFLSMKLAAVNPR-LDFNVD 183
EIINYVQSLQ QVEFLSMKLA++NP DF +D
Sbjct: 212 EIINYVQSLQNQVEFLSMKLASLNPMYYDFGMD 244
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 72/91 (79%), Positives = 79/91 (86%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
Q++K SE K DYIHVRARRGQATDSHSLAER RREKISERM LQDLVPGCNK+ GKA
Sbjct: 69 QSSKPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMNMLQDLVPGCNKVIGKAL 128
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLD 179
+LDEIINY+QSLQ QVEFLSMKL AVN R++
Sbjct: 129 VLDEIINYIQSLQCQVEFLSMKLEAVNSRMN 159
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 74/97 (76%), Positives = 81/97 (83%), Gaps = 1/97 (1%)
Query: 83 RKADKVQNTKASEVQ-KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCN 141
R QN++ + Q K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCN
Sbjct: 149 RSGKTEQNSQPTPEQPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 208
Query: 142 KITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
K+ GKA +LDEIINY+QSLQRQVEFLSMKL AVN R+
Sbjct: 209 KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRI 245
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 70/104 (67%), Positives = 85/104 (81%)
Query: 95 EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 154
E K Y+HVRARRGQATD+HSLAER RREKI+ RMK LQ+LVPGC+KI G A +LDEII
Sbjct: 176 ESDKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEII 235
Query: 155 NYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNF 198
N+VQ+LQRQVE LSM+LAAVNPR+DFN+D++ A E + +F
Sbjct: 236 NHVQTLQRQVEMLSMRLAAVNPRIDFNLDSILASENGSLMDGSF 279
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 109/177 (61%), Gaps = 21/177 (11%)
Query: 56 VDVKGKVSVAALNEKVSAAVGRESFKKRK---ADKVQNTKASEVQKH-------DYIHVR 105
VD K K + +LN S V K++K D Q K + K Y+HVR
Sbjct: 114 VDRKRKTTNGSLNSAQSKDVKEVKSKRQKKCRGDMKQEEKRPKAVKKVPEEPPTGYVHVR 173
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
ARRGQATDSHSLAERVRREKISERMK LQ LVPGC+K+TGKA MLDEIINYVQSLQ QVE
Sbjct: 174 ARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVE 233
Query: 166 FLSMKLAAVNPRL-DFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQ 221
FLSMKLA+VNP DF ++ +AF V P S M+ P L Q + +Q
Sbjct: 234 FLSMKLASVNPMFYDFGME----LDAFMVRPERL------SSMSPPLPSLQQCSPIQ 280
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/138 (61%), Positives = 97/138 (70%), Gaps = 8/138 (5%)
Query: 57 DVKGKVSVAA--LNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDS 114
D GK + A+ NE V E+ + A++ S+ K DYIHVRARRGQATDS
Sbjct: 102 DSDGKRTKASGNKNEGGDGKVEGEASSGKHAEQSSKPPPSDPPKQDYIHVRARRGQATDS 161
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAV 174
HSLAER RREKISERMK LQDLVPGCNK+ GKA +LDEIINY+QSLQRQVEFLSMKL AV
Sbjct: 162 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 221
Query: 175 NPRLDFNVDNLFAKEAFP 192
N RL+ + EAFP
Sbjct: 222 NSRLNTGI------EAFP 233
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/97 (76%), Positives = 81/97 (83%), Gaps = 1/97 (1%)
Query: 83 RKADKVQNTKASEVQ-KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCN 141
R QN++ + Q K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCN
Sbjct: 25 RSGKTEQNSQPTPEQPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 84
Query: 142 KITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
K+ GKA +LDEIINY+QSLQRQVEFLSMKL AVN R+
Sbjct: 85 KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRI 121
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/119 (65%), Positives = 90/119 (75%), Gaps = 5/119 (4%)
Query: 92 KASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLD 151
KA+E YIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+K+TGKA MLD
Sbjct: 141 KANEEAPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQSLVPGCDKVTGKALMLD 200
Query: 152 EIINYVQSLQRQVEFLSMKLAAVNPR-LDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTH 209
EIINYVQSLQ QVEFLSMKL ++NP DF +D +A V P + G+ ++M +
Sbjct: 201 EIINYVQSLQNQVEFLSMKLTSLNPMYYDFGMD----LDALMVRPDDQSLSGLETQMAN 255
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/112 (68%), Positives = 84/112 (75%), Gaps = 3/112 (2%)
Query: 68 NEKVSAAVGRESFKKRKA-DKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKI 126
N+ + G +S KA DK N E K DYIHVRARRGQATDSHSLAER RREKI
Sbjct: 93 NDSLRTEAGTDSGNSSKAADK--NATPPEPPKQDYIHVRARRGQATDSHSLAERARREKI 150
Query: 127 SERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
SERMK LQDLVPGCNK+ GKA +LDEIINY+QSLQ QVEFLSMKL AVN +
Sbjct: 151 SERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFLSMKLEAVNSHM 202
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/81 (85%), Positives = 74/81 (91%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA +LDEIINY+QS
Sbjct: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
Query: 160 LQRQVEFLSMKLAAVNPRLDF 180
LQRQVEFLSMKL AVN R++
Sbjct: 203 LQRQVEFLSMKLEAVNSRMNI 223
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/98 (73%), Positives = 79/98 (80%), Gaps = 1/98 (1%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DYIHVRARRGQATDSHSLAER RREKISERMK LQD+VPGCNK+ GKA +LDEIINY+QS
Sbjct: 119 DYIHVRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQS 178
Query: 160 LQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSN 197
LQRQVEFLSMKL A+N + N F + F V P N
Sbjct: 179 LQRQVEFLSMKLEAINAHVS-NATVAFPTKDFGVAPYN 215
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/138 (60%), Positives = 96/138 (69%), Gaps = 8/138 (5%)
Query: 57 DVKGKVSVAA--LNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDS 114
D GK + A+ NE V E+ + A++ S+ K DYIHVRARRGQATDS
Sbjct: 102 DSDGKRTKASGNKNEGGDGKVEGEASSGKHAEQSSKPPPSDPPKQDYIHVRARRGQATDS 161
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAV 174
H LAER RREKISERMK LQDLVPGCNK+ GKA +LDEIINY+QSLQRQVEFLSMKL AV
Sbjct: 162 HGLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 221
Query: 175 NPRLDFNVDNLFAKEAFP 192
N RL+ + EAFP
Sbjct: 222 NSRLNTGI------EAFP 233
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/104 (68%), Positives = 82/104 (78%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA +LDEIINY+QS
Sbjct: 165 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 224
Query: 160 LQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGM 203
LQRQVEFLSMKL VN ++ ++ +K+ + P+ F M
Sbjct: 225 LQRQVEFLSMKLEVVNSGVNPAINCFPSKDVNQLAPTTFEAAAM 268
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/113 (68%), Positives = 88/113 (77%), Gaps = 14/113 (12%)
Query: 81 KKRKADKVQNTKA--------SEVQKH------DYIHVRARRGQATDSHSLAERVRREKI 126
K++K D+V + KA +E +K DYIHVRARRGQATDSHSLAER RREKI
Sbjct: 93 KRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKI 152
Query: 127 SERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLD 179
SERMK LQDLVPGCNK+ GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++
Sbjct: 153 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 205
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/113 (68%), Positives = 88/113 (77%), Gaps = 14/113 (12%)
Query: 81 KKRKADKVQNTKA--------SEVQKH------DYIHVRARRGQATDSHSLAERVRREKI 126
K++K D+V + KA +E +K DYIHVRARRGQATDSHSLAER RREKI
Sbjct: 99 KRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKI 158
Query: 127 SERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLD 179
SERMK LQDLVPGCNK+ GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++
Sbjct: 159 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 211
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/136 (57%), Positives = 97/136 (71%), Gaps = 9/136 (6%)
Query: 49 PAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARR 108
P+ + +G+ + + N K GR+S K+++ K E DYIHVRARR
Sbjct: 89 PSAITNTGKTRGRKARNSNNSK-EGVEGRKSKKQKRGSK-------EEPPTDYIHVRARR 140
Query: 109 GQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
GQATDSHSLAERVRREKISERM+ LQ+LVPGC+K+TGKA MLDEIINYVQ+LQ QVEFLS
Sbjct: 141 GQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLS 200
Query: 169 MKLAAVNPRL-DFNVD 183
MKL +++P + DF D
Sbjct: 201 MKLTSISPVVYDFGSD 216
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/113 (68%), Positives = 88/113 (77%), Gaps = 14/113 (12%)
Query: 81 KKRKADKVQNTKA--------SEVQKH------DYIHVRARRGQATDSHSLAERVRREKI 126
K++K D+V + KA +E +K DYIHVRARRGQATDSHSLAER RREKI
Sbjct: 99 KRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKI 158
Query: 127 SERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLD 179
SERMK LQDLVPGCNK+ GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++
Sbjct: 159 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 211
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/123 (64%), Positives = 92/123 (74%), Gaps = 14/123 (11%)
Query: 81 KKRKADKVQNTKA--------SEVQK------HDYIHVRARRGQATDSHSLAERVRREKI 126
K++K D+V + KA +E +K DYIHVRARRGQATDSHSLAER RREKI
Sbjct: 99 KRQKIDEVCDGKAEAESLGTETEQKKLQIEPTKDYIHVRARRGQATDSHSLAERARREKI 158
Query: 127 SERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLF 186
SERMK LQDLVPGCNK+ GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++ ++
Sbjct: 159 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIEVFP 218
Query: 187 AKE 189
KE
Sbjct: 219 PKE 221
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/104 (66%), Positives = 84/104 (80%)
Query: 95 EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 154
E K Y+HVRARRGQATD+HSLAER RREKI+ RMK LQ+LVPGC+KI G +LDEII
Sbjct: 176 ESDKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTGLVLDEII 235
Query: 155 NYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNF 198
N+VQ+LQRQVE LSM+LAAVNPR+DFN+D++ A E + +F
Sbjct: 236 NHVQTLQRQVEMLSMRLAAVNPRIDFNLDSILASENGSLMDGSF 279
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/84 (85%), Positives = 76/84 (90%), Gaps = 1/84 (1%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
YIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+K+TGKA MLDEIINYVQSL
Sbjct: 168 YIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIINYVQSL 227
Query: 161 QRQVEFLSMKLAAVNPRL-DFNVD 183
Q QVEFLSMKLA+VNP DF +D
Sbjct: 228 QNQVEFLSMKLASVNPMFYDFGMD 251
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/112 (69%), Positives = 89/112 (79%), Gaps = 5/112 (4%)
Query: 77 RESFKKRKADKVQNTKASEVQKHD----YIHVRARRGQATDSHSLAERVRREKISERMKY 132
R+S KK KA++ K ++ + YIHVRARRGQATDSHSLAERVRREKISERMK
Sbjct: 104 RKSQKKPKANESDEMKERTQEEEEAPVGYIHVRARRGQATDSHSLAERVRREKISERMKL 163
Query: 133 LQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNVD 183
LQ LVPGC+K+TGKA MLDEIINYVQSLQ QVEFLSMKLA V+P L +F +D
Sbjct: 164 LQALVPGCDKVTGKAVMLDEIINYVQSLQNQVEFLSMKLATVSPMLYEFGLD 215
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/84 (82%), Positives = 74/84 (88%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
K DYIHVRARRGQATDSHSLAER RREKISERMK LQD+VPGCNK+ GKA +LDEIINY+
Sbjct: 94 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYI 153
Query: 158 QSLQRQVEFLSMKLAAVNPRLDFN 181
QSLQ QVEFLSMKL AVN RL +
Sbjct: 154 QSLQHQVEFLSMKLEAVNSRLSMS 177
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/92 (73%), Positives = 79/92 (85%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
K DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPGCNK+ GKA +LDEIINY+
Sbjct: 106 KQDYIHVRARRGQATDSHSIAERARREKISERMKMLQDLVPGCNKVIGKASVLDEIINYI 165
Query: 158 QSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
Q+LQRQVEFLSMKL AVN ++ + + +K+
Sbjct: 166 QALQRQVEFLSMKLEAVNAHVNNRIASFQSKD 197
>gi|295913280|gb|ADG57897.1| transcription factor [Lycoris longituba]
Length = 176
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/125 (60%), Positives = 96/125 (76%), Gaps = 4/125 (3%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ+LVPGC+KI+G A +LDEIIN+VQSL
Sbjct: 4 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKISGTALVLDEIINHVQSL 63
Query: 161 QRQVEFLSMKLAAVNPRLDFN-VDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLH-QFN 218
QR+VEFLSM+LAAVNPR+DF+ +D++ + E + +N IG + +A+L N
Sbjct: 64 QREVEFLSMRLAAVNPRIDFSGLDSILSSECGHLTSNN--RIGTGTVAMEQSAWLDGMIN 121
Query: 219 SLQQQ 223
+QQ
Sbjct: 122 GCKQQ 126
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/91 (79%), Positives = 78/91 (85%), Gaps = 3/91 (3%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
YIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+K+TGKA MLDEIINYVQSL
Sbjct: 161 YIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSL 220
Query: 161 QRQVEFLSMKLAAVNPR---LDFNVDNLFAK 188
Q QVEFLSMKLA+VNP L ++D L +
Sbjct: 221 QNQVEFLSMKLASVNPMFYDLATDLDTLLVR 251
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/108 (71%), Positives = 84/108 (77%), Gaps = 9/108 (8%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DYIHVRARRGQATDSHSLAER RREKISERMK LQD+VPGCNK+TGKA +LDEIINY+QS
Sbjct: 137 DYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQS 196
Query: 160 LQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFP---VCPSNFPTIGMS 204
LQRQVEFLSMKL AVN L+ N + E FP F T GM+
Sbjct: 197 LQRQVEFLSMKLEAVN--LNMNPET----EVFPSKDFGQHTFDTAGMA 238
>gi|125526612|gb|EAY74726.1| hypothetical protein OsI_02617 [Oryza sativa Indica Group]
Length = 386
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/137 (58%), Positives = 85/137 (62%), Gaps = 46/137 (33%)
Query: 100 DYIHVRARRGQATDSHSLAERV--------------------------------RREKIS 127
DYIHVRARRGQATDSHSLAERV RREKIS
Sbjct: 153 DYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREKIS 212
Query: 128 ERMKYLQDLVPGCNKI--------------TGKAGMLDEIINYVQSLQRQVEFLSMKLAA 173
ERMK LQDLVPGCNK+ TGKA MLDEIINYVQSLQRQVEFLSMKL+
Sbjct: 213 ERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSMKLST 272
Query: 174 VNPRLDFNVDNLFAKEA 190
VNP+LDF+VDN K+A
Sbjct: 273 VNPQLDFDVDNFIPKDA 289
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/82 (84%), Positives = 73/82 (89%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA +LDEIINY+QS
Sbjct: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
Query: 160 LQRQVEFLSMKLAAVNPRLDFN 181
LQ QVEFLSMKL AVN R + N
Sbjct: 147 LQHQVEFLSMKLEAVNSRFNMN 168
>gi|62701739|gb|AAX92812.1| expressed protein [Oryza sativa Japonica Group]
Length = 507
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/137 (58%), Positives = 85/137 (62%), Gaps = 46/137 (33%)
Query: 100 DYIHVRARRGQATDSHSLAERV--------------------------------RREKIS 127
DYIHVRARRGQATDSHSLAERV RREKIS
Sbjct: 274 DYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREKIS 333
Query: 128 ERMKYLQDLVPGCNKI--------------TGKAGMLDEIINYVQSLQRQVEFLSMKLAA 173
ERMK LQDLVPGCNK+ TGKA MLDEIINYVQSLQRQVEFLSMKL+
Sbjct: 334 ERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSMKLST 393
Query: 174 VNPRLDFNVDNLFAKEA 190
VNP+LDF+VDN K+A
Sbjct: 394 VNPQLDFDVDNFIPKDA 410
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/84 (84%), Positives = 76/84 (90%), Gaps = 1/84 (1%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
YIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+K+TGKA MLDEIINYVQSL
Sbjct: 145 YIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSL 204
Query: 161 QRQVEFLSMKLAAVNPR-LDFNVD 183
Q QVEFLSMKLA++NP DF +D
Sbjct: 205 QNQVEFLSMKLASLNPIFFDFRMD 228
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/84 (84%), Positives = 76/84 (90%), Gaps = 1/84 (1%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
YIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+K+TGKA MLDEIINYVQSL
Sbjct: 177 YIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSL 236
Query: 161 QRQVEFLSMKLAAVNP-RLDFNVD 183
Q QVEFLSMKLA++NP DF +D
Sbjct: 237 QNQVEFLSMKLASLNPIFFDFRMD 260
>gi|357117653|ref|XP_003560578.1| PREDICTED: transcription factor bHLH48-like [Brachypodium
distachyon]
Length = 259
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/152 (53%), Positives = 104/152 (68%), Gaps = 11/152 (7%)
Query: 82 KRKADKV-----QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 136
KRKAD ++ E +K Y+HVRARRGQATDSHSLAER RREKI+ RM+ L++L
Sbjct: 53 KRKADHAADRASKDAGGGEDEKPAYVHVRARRGQATDSHSLAERARREKINARMELLKEL 112
Query: 137 VPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVCP 195
VPGC+K++G A +LDEIIN+VQSLQRQVE+LSM+LAAVNPR+DF +D+ E +
Sbjct: 113 VPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDSFLTSECGRITG 172
Query: 196 SNFPTIGMSSE-MTHPAAYLH---QFNSLQQQ 223
N + GM E +T P +H LQQQ
Sbjct: 173 LNCKS-GMDLEQVTWPDMGVHGARHLMQLQQQ 203
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 78/91 (85%), Gaps = 3/91 (3%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
YIHVRARRGQATDSHSLAERVRREKISERM LQ LVPGC+K+TGKA +L+EIINYVQSL
Sbjct: 116 YIHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSL 175
Query: 161 QRQVEFLSMKLAAVNPRL---DFNVDNLFAK 188
Q QVEFLSMKLA+VNP L ++DNL +
Sbjct: 176 QHQVEFLSMKLASVNPMLFDMAMDLDNLLVR 206
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/98 (71%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DYIHVRARRGQATDSHSLAER RREKISERMK LQD+VPGCNK+ GKA +LDEIINY+QS
Sbjct: 46 DYIHVRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQS 105
Query: 160 LQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSN 197
LQRQVEFLSMKL +N ++ N F + F P N
Sbjct: 106 LQRQVEFLSMKLETINAHMN-NATVAFPTKDFGAPPYN 142
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/91 (79%), Positives = 78/91 (85%), Gaps = 3/91 (3%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
YIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+K+TGKA MLDEIINYVQSL
Sbjct: 144 YIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSL 203
Query: 161 QRQVEFLSMKLAAVNP---RLDFNVDNLFAK 188
Q QVEFLSMKLA+VNP L ++D L +
Sbjct: 204 QNQVEFLSMKLASVNPMFYDLATDLDTLLVR 234
>gi|295913282|gb|ADG57898.1| transcription factor [Lycoris longituba]
Length = 206
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 97/131 (74%), Gaps = 6/131 (4%)
Query: 97 QKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK--ITGKAGMLDEII 154
+K Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ+LVPGC+K I+G A +LD+II
Sbjct: 25 EKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKGQISGTALVLDKII 84
Query: 155 NYVQSLQRQVEFLSMKLAAVNPRLDFN-VDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAY 213
N+VQSLQRQVEFLSM+LAAV PR+DF+ +DN+ + E + SN IGM + + +
Sbjct: 85 NHVQSLQRQVEFLSMRLAAVTPRIDFSGLDNILSSECGRLTSSN--RIGMGTVAMEQSTW 142
Query: 214 LH-QFNSLQQQ 223
L N +QQ
Sbjct: 143 LDGMINGCKQQ 153
>gi|4567302|gb|AAD23713.1| unknown protein [Arabidopsis thaliana]
Length = 226
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/103 (67%), Positives = 83/103 (80%), Gaps = 8/103 (7%)
Query: 95 EVQKHDYIHVRARRGQATDSHSLAERV--------RREKISERMKYLQDLVPGCNKITGK 146
E K Y+HVRARRGQATD+HSLAERV RREKI+ RMK LQ+LVPGC+KI G
Sbjct: 120 ESDKLPYVHVRARRGQATDNHSLAERVIHNLTDMARREKINARMKLLQELVPGCDKIQGT 179
Query: 147 AGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
A +LDEIIN+VQ+LQRQVE LSM+LAAVNPR+DFN+D++ A E
Sbjct: 180 ALVLDEIINHVQTLQRQVEMLSMRLAAVNPRIDFNLDSILASE 222
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/126 (61%), Positives = 93/126 (73%), Gaps = 17/126 (13%)
Query: 73 AAVGRESFKKRKADKVQNTK------ASEVQKH--------DYIHVRARRGQATDSHSLA 118
+G++ + RKA V N+K S+ QK DYIHVRARRGQATDSHSLA
Sbjct: 94 TTIGKK--RGRKARNVSNSKEGVEGTKSKKQKRGSKEEPPKDYIHVRARRGQATDSHSLA 151
Query: 119 ERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
ERVRREKISERM+ LQ+LVPGC+K+TGKA MLDEIINYVQ+LQ QVEFLSMKL +++P +
Sbjct: 152 ERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQNQVEFLSMKLTSISPVV 211
Query: 179 -DFNVD 183
DF D
Sbjct: 212 YDFGSD 217
>gi|108864345|gb|ABA93365.2| expressed protein [Oryza sativa Japonica Group]
Length = 508
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 84/136 (61%), Gaps = 46/136 (33%)
Query: 100 DYIHVRARRGQATDSHSLAERV--------------------------------RREKIS 127
DYIHVRARRGQATDSHSLAERV RREKIS
Sbjct: 274 DYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREKIS 333
Query: 128 ERMKYLQDLVPGCNKI--------------TGKAGMLDEIINYVQSLQRQVEFLSMKLAA 173
ERMK LQDLVPGCNK+ TGKA MLDEIINYVQSLQRQVEFLSMKL+
Sbjct: 334 ERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSMKLST 393
Query: 174 VNPRLDFNVDNLFAKE 189
VNP+LDF+VDN K+
Sbjct: 394 VNPQLDFDVDNFIPKD 409
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/83 (83%), Positives = 73/83 (87%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
K DYIHVRARRGQATD+HSLAER RREKISERMK LQDLVPGCNK+ GKA +LD IINYV
Sbjct: 93 KQDYIHVRARRGQATDNHSLAERARREKISERMKILQDLVPGCNKVIGKAFVLDGIINYV 152
Query: 158 QSLQRQVEFLSMKLAAVNPRLDF 180
QSLQRQVEFLSMKL AV+ RL
Sbjct: 153 QSLQRQVEFLSMKLEAVSSRLSM 175
>gi|223702424|gb|ACN21643.1| putative basic helix-loop-helix protein BHLH6 [Lotus japonicus]
Length = 364
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/122 (64%), Positives = 86/122 (70%), Gaps = 22/122 (18%)
Query: 89 QNTKASEVQ--KHDYIHVRARRGQATDSHSLAERV----------------RREKISERM 130
Q+TK SE + K DYIHVRARRGQATDSHS+AERV RREKISERM
Sbjct: 107 QSTKPSESEPPKQDYIHVRARRGQATDSHSIAERVIHFSLCLSISYLLLVARREKISERM 166
Query: 131 KYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEA 190
K LQDLVPGCNK+ GKA +LDEIINY+QSLQ QVEFLSMKL AVN R + N N E
Sbjct: 167 KILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLNPTN----EG 222
Query: 191 FP 192
FP
Sbjct: 223 FP 224
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/84 (80%), Positives = 73/84 (86%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
K DYIHVRARRGQATDSHSLAER RREKISERMK LQD+VPGCNK+ GKA +LDEIINY+
Sbjct: 94 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYI 153
Query: 158 QSLQRQVEFLSMKLAAVNPRLDFN 181
QSLQ QVEFL MKL AVN RL +
Sbjct: 154 QSLQHQVEFLFMKLEAVNSRLSMS 177
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/84 (83%), Positives = 76/84 (90%), Gaps = 1/84 (1%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
YIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+++TGKA +LDEIINYVQSL
Sbjct: 142 YIHVRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYVQSL 201
Query: 161 QRQVEFLSMKLAAVNP-RLDFNVD 183
Q QVEFLSMKLA+VNP DF +D
Sbjct: 202 QNQVEFLSMKLASVNPIFFDFAMD 225
>gi|413954819|gb|AFW87468.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 372
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 103/152 (67%), Gaps = 4/152 (2%)
Query: 76 GRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
G+ + K + A++ + +K Y+HVRARRGQATDSHSLAER RREKI+ RM+ L++
Sbjct: 165 GKAAKKGKTAEEKLAGGDGDDEKPAYVHVRARRGQATDSHSLAERARREKINARMELLKE 224
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVC 194
LVPGC+K++G A +LDEIIN+VQSLQRQVE+LSM+LAAVNPR+DF +D+ E +
Sbjct: 225 LVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDSFLTTECGRIA 284
Query: 195 PSNFPTIGMSSEMTHPAAYLH---QFNSLQQQ 223
N ++T P +H Q LQQQ
Sbjct: 285 GFNCKNGIDLEQVTWPEMGVHGARQLMQLQQQ 316
>gi|218198545|gb|EEC80972.1| hypothetical protein OsI_23697 [Oryza sativa Indica Group]
Length = 286
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/124 (59%), Positives = 93/124 (75%), Gaps = 3/124 (2%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
Y+HVRARRGQATDSHSLAER RREKI+ RM+ L++LVPGC+K++G A +LDEIIN+VQSL
Sbjct: 104 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 163
Query: 161 QRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVCPSNFPTIGMSSE-MTHPAAYLHQFN 218
QRQVE+LSM+LAAVNPR+DF +DN E + N+ GM E +T P +H
Sbjct: 164 QRQVEYLSMRLAAVNPRVDFGGLDNFLTTECGRITGLNYKN-GMDLEQVTWPDMGVHGAR 222
Query: 219 SLQQ 222
+L Q
Sbjct: 223 NLMQ 226
>gi|222635879|gb|EEE66011.1| hypothetical protein OsJ_21966 [Oryza sativa Japonica Group]
Length = 325
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/124 (59%), Positives = 93/124 (75%), Gaps = 3/124 (2%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
Y+HVRARRGQATDSHSLAER RREKI+ RM+ L++LVPGC+K++G A +LDEIIN+VQSL
Sbjct: 143 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 202
Query: 161 QRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVCPSNFPTIGMSSE-MTHPAAYLHQFN 218
QRQVE+LSM+LAAVNPR+DF +DN E + N+ GM E +T P +H
Sbjct: 203 QRQVEYLSMRLAAVNPRVDFGGLDNFLTTECGRITGLNYKN-GMDLEQVTWPDMGVHGAR 261
Query: 219 SLQQ 222
+L Q
Sbjct: 262 NLMQ 265
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 71/80 (88%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA +LDEIINY+
Sbjct: 106 KKDYIHVRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYI 165
Query: 158 QSLQRQVEFLSMKLAAVNPR 177
QSL QVEFLSMKL AVN R
Sbjct: 166 QSLHHQVEFLSMKLEAVNSR 185
>gi|413954820|gb|AFW87469.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 94/131 (71%), Gaps = 4/131 (3%)
Query: 97 QKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 156
+K Y+HVRARRGQATDSHSLAER RREKI+ RM+ L++LVPGC+K++G A +LDEIIN+
Sbjct: 173 EKPAYVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINH 232
Query: 157 VQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLH 215
VQSLQRQVE+LSM+LAAVNPR+DF +D+ E + N ++T P +H
Sbjct: 233 VQSLQRQVEYLSMRLAAVNPRVDFGGLDSFLTTECGRIAGFNCKNGIDLEQVTWPEMGVH 292
Query: 216 ---QFNSLQQQ 223
Q LQQQ
Sbjct: 293 GARQLMQLQQQ 303
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/76 (86%), Positives = 70/76 (92%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DYIHVRARRGQATD HSLAER RREKISERMK+LQDL+PGCNKI GKA +LDEIINY+QS
Sbjct: 136 DYIHVRARRGQATDRHSLAERARREKISERMKFLQDLIPGCNKIIGKALVLDEIINYIQS 195
Query: 160 LQRQVEFLSMKLAAVN 175
LQRQVEFLSMKL VN
Sbjct: 196 LQRQVEFLSMKLEIVN 211
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 108/165 (65%), Gaps = 15/165 (9%)
Query: 35 FEASYAISRTSSSPPAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKK------RKADKV 88
++S A+ TS P A ++ K A + +S+A +E K+ R+ +
Sbjct: 56 LQSSSAVVDTSPQPQGSAAAASPMERKRKPAEDSATLSSAQSKEDCKQQQESKSRRGKRP 115
Query: 89 QNTKASEVQK--------HDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
N +A+ +K YIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ LVPGC
Sbjct: 116 HNKEANTEEKSATEDEATRGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGC 175
Query: 141 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNVDN 184
+K+TGKA +LDEIINYVQSLQ QVEFLSM++A+++P L F +D+
Sbjct: 176 DKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGLDS 220
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 108/165 (65%), Gaps = 15/165 (9%)
Query: 35 FEASYAISRTSSSPPAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKK------RKADKV 88
++S A+ TS P A ++ K A + +S+A +E K+ R+ +
Sbjct: 56 LQSSSAVVDTSPQPQGSAAAASPMERKRKPAEDSATLSSAQSKEDCKQQQESKSRRGKRP 115
Query: 89 QNTKASEVQK--------HDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
N +A+ +K YIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ LVPGC
Sbjct: 116 HNKEANTEEKSATEDEATRGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGC 175
Query: 141 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNVDN 184
+K+TGKA +LDEIINYVQSLQ QVEFLSM++A+++P L F +D+
Sbjct: 176 DKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGLDS 220
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 78/91 (85%), Gaps = 2/91 (2%)
Query: 93 ASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDE 152
A+ ++ DY HVRA+RGQAT+SHSLAER RREKI+ RMK LQDLVPGCNKITGKA MLDE
Sbjct: 143 AAGAKREDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDE 202
Query: 153 IINYVQSLQRQVEFLSMKLAAVNPRLDFNVD 183
IINYVQSLQRQVEFLSMKL+A+ P FN D
Sbjct: 203 IINYVQSLQRQVEFLSMKLSAIRP--GFNRD 231
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/132 (56%), Positives = 98/132 (74%), Gaps = 2/132 (1%)
Query: 55 AVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQK-HDYIHVRARRGQATD 113
+VD K K + + + K S G+ K+ + +V+ +E + YIHVRARRGQATD
Sbjct: 73 SVDRKRKAAEDSAHSKDSCKDGKSRRGKKASKEVEEKSTTEDEPPKGYIHVRARRGQATD 132
Query: 114 SHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAA 173
SHSLAERVRRE+ISERM+ LQ LVPGC+K+TGKA +LDEIINYVQSLQ QVEFLSM++A+
Sbjct: 133 SHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS 192
Query: 174 VNPRL-DFNVDN 184
++P L F +D+
Sbjct: 193 MSPVLYGFGMDS 204
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 78/91 (85%), Gaps = 2/91 (2%)
Query: 93 ASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDE 152
A+ ++ DY HVRA+RGQAT+SHSLAER RREKI+ RMK LQDLVPGCNKITGKA MLDE
Sbjct: 143 AAGAKREDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDE 202
Query: 153 IINYVQSLQRQVEFLSMKLAAVNPRLDFNVD 183
IINYVQSLQRQVEFLSMKL+A+ P FN D
Sbjct: 203 IINYVQSLQRQVEFLSMKLSAIRP--GFNRD 231
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/105 (64%), Positives = 85/105 (80%), Gaps = 1/105 (0%)
Query: 81 KKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
K R+ + +++ E YIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ LVPGC
Sbjct: 102 KSRRGKREKSSTDQEEAPKGYIHVRARRGQATDSHSLAERVRRERISERMRLLQTLVPGC 161
Query: 141 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNVDN 184
+K+TGKA +LDEIINYVQSLQ QVEFLSM++A+++P L F +D+
Sbjct: 162 DKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGLDS 206
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 74/88 (84%)
Query: 91 TKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGML 150
+K SE DYIHVR+RRGQATDSHSLAER RRE+I ERMK LQDLVPGCNK+ GKA L
Sbjct: 130 SKPSEPPMQDYIHVRSRRGQATDSHSLAERARRERIGERMKILQDLVPGCNKVIGKALAL 189
Query: 151 DEIINYVQSLQRQVEFLSMKLAAVNPRL 178
DEIINY+QSLQ QVEFLSMKL AVN R+
Sbjct: 190 DEIINYIQSLQCQVEFLSMKLEAVNSRM 217
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/110 (64%), Positives = 89/110 (80%), Gaps = 2/110 (1%)
Query: 77 RESFKKRKADKVQNTK-ASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
+ES KK+ + +++K E + YIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ
Sbjct: 81 KESTKKKGGKRDRSSKEVDEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQA 140
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNVDN 184
LVPGC+K+TGKA +LDEIINYVQSLQ QVEFLSM++A+++P L F +D
Sbjct: 141 LVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASLSPVLYGFGMDT 190
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/121 (60%), Positives = 90/121 (74%), Gaps = 2/121 (1%)
Query: 64 VAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRR 123
A+LN S +E+ +KR K + E +IHVRARRGQATDSHSLAERVRR
Sbjct: 68 TASLNSAHSKEA-KENGRKRGGKKHSRDQMEEEAPQGFIHVRARRGQATDSHSLAERVRR 126
Query: 124 EKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNV 182
E+ISERM+ LQ LVPGC+K+TGKA +LDEIINYVQSLQ QVEFLSM++A+++P L F +
Sbjct: 127 ERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASLSPVLYGFGI 186
Query: 183 D 183
D
Sbjct: 187 D 187
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/78 (85%), Positives = 73/78 (93%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
YIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+K+TGKA MLDEII+YVQSL
Sbjct: 177 YIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSL 236
Query: 161 QRQVEFLSMKLAAVNPRL 178
Q QVEFLSMKLA++NP +
Sbjct: 237 QNQVEFLSMKLASLNPLM 254
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 108/165 (65%), Gaps = 15/165 (9%)
Query: 35 FEASYAISRTSSSPPAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKK------RKADKV 88
++S A+ TS P A ++ K A + +S+A +E K+ R+ +
Sbjct: 56 LQSSSAVVDTSPQPQGSAAAASPMERKRKPAEDSATLSSAQSKEDCKQQQESKSRRGKRP 115
Query: 89 QNTKASEVQK--------HDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
N +A+ +K YIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ LVPGC
Sbjct: 116 HNKEANTEEKSATEDEATRGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGC 175
Query: 141 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNVDN 184
+K+TGKA +LDEIINYVQSLQ QVEFLSM++A+++P L F +D+
Sbjct: 176 DKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGLDS 220
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/109 (65%), Positives = 86/109 (78%), Gaps = 3/109 (2%)
Query: 79 SFKKRKADKVQNTKA--SEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 136
S K R + +++K E + YIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ L
Sbjct: 94 STKNRGGKRGRSSKEVDEEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQAL 153
Query: 137 VPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNVDN 184
VPGC+K+TGKA +LDEIINYVQSLQ QVEFLSMK+A+++P L F +D
Sbjct: 154 VPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKIASLSPVLYGFGMDT 202
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 71/109 (65%), Positives = 86/109 (78%), Gaps = 3/109 (2%)
Query: 79 SFKKRKADKVQNTKA--SEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 136
S K R + +++K E + YIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ L
Sbjct: 84 STKNRGGKRGRSSKEVDEEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQAL 143
Query: 137 VPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNVDN 184
VPGC+K+TGKA +LDEIINYVQSLQ QVEFLSMK+A+++P L F +D
Sbjct: 144 VPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKIASLSPVLYGFGMDT 192
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/149 (54%), Positives = 104/149 (69%), Gaps = 9/149 (6%)
Query: 36 EASYAISRTSSS----PPAVVPEAVDVKGKV---SVAALNEKVSAAVGRESFKKRKADKV 88
+A+ A SR SS P V +++ K K + A+LN S +ES +KR K
Sbjct: 30 DAAAAASREGSSVVLDTPLVATASMEKKRKPKEDTTASLNSAHSKET-KESTRKRGGKKQ 88
Query: 89 -QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKA 147
+ T E + YIHVRARRGQATDSHSL+ERVRRE+ISERM+ LQ LVPGC+K+TGKA
Sbjct: 89 DKETAEEEEEPKGYIHVRARRGQATDSHSLSERVRRERISERMRMLQSLVPGCDKVTGKA 148
Query: 148 GMLDEIINYVQSLQRQVEFLSMKLAAVNP 176
+LDEIINYV+SLQ QVEFLSM++A+++P
Sbjct: 149 LILDEIINYVRSLQNQVEFLSMRIASLSP 177
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/110 (64%), Positives = 87/110 (79%), Gaps = 4/110 (3%)
Query: 79 SFKKRKADKVQNTKASEVQKHD---YIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
S K R + +++K E + + YIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ
Sbjct: 92 STKNRGGKRGRSSKEVEDDEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQA 151
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNVDN 184
LVPGC+K+TGKA +LDEIINYVQSLQ QVEFLSMK+A+++P L F +D
Sbjct: 152 LVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKIASLSPVLYGFGMDT 201
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/124 (62%), Positives = 84/124 (67%), Gaps = 15/124 (12%)
Query: 68 NEKVSAAVGRESFKKRKA-DKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKI 126
N+ + G +S KA DK N E K DYIHVRARRGQATDSHSLAER RREKI
Sbjct: 93 NDSLRTEAGTDSGNSSKAADK--NATPPEPPKQDYIHVRARRGQATDSHSLAERARREKI 150
Query: 127 SERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE------------FLSMKLAAV 174
SERMK LQDLVPGCNK+ GKA +LDEIINY+QSLQ QVE FLSMKL AV
Sbjct: 151 SERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFMFKYLIELFLQFLSMKLEAV 210
Query: 175 NPRL 178
N +
Sbjct: 211 NSHM 214
>gi|413943655|gb|AFW76304.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 370
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 93/133 (69%), Gaps = 4/133 (3%)
Query: 95 EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 154
E +K Y+HVRARRGQATDSHSLAER RREKI+ RM+ L++LVPGC+K++G A +LDEII
Sbjct: 148 EDEKPAYVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEII 207
Query: 155 NYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAY 213
N+VQSLQRQVE+LSM+LA VNPR DF +D+ E + N ++T P
Sbjct: 208 NHVQSLQRQVEYLSMRLATVNPRGDFGGLDSFLTTECGRIASFNCKNGIDLEQVTWPEMG 267
Query: 214 LH---QFNSLQQQ 223
+H Q LQQQ
Sbjct: 268 VHGARQLMQLQQQ 280
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/110 (62%), Positives = 89/110 (80%), Gaps = 2/110 (1%)
Query: 77 RESFKKRKADKVQNTK-ASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
+ES K+ + +++K E + YIHVRARRGQATD+HSLAERVRRE+ISERM+ LQ
Sbjct: 83 KESSKRSGGKRDRSSKKVDEEEPKGYIHVRARRGQATDNHSLAERVRRERISERMRVLQA 142
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNVDN 184
LVPGC+K+TGKA +LDEIINYVQSLQ QVEFLSM++A+++P L F +D+
Sbjct: 143 LVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASLSPVLYGFGMDS 192
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/110 (62%), Positives = 89/110 (80%), Gaps = 2/110 (1%)
Query: 77 RESFKKRKADKVQNTK-ASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
+ES K+ + +++K E + YIHVRARRGQATD+HSLAERVRRE+ISERM+ LQ
Sbjct: 83 KESSKRSGGKRDRSSKKVDEEEPKGYIHVRARRGQATDNHSLAERVRRERISERMRVLQA 142
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNVDN 184
LVPGC+K+TGKA +LDEIINYVQSLQ QVEFLSM++A+++P L F +D+
Sbjct: 143 LVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASLSPVLYGFGMDS 192
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/97 (68%), Positives = 82/97 (84%), Gaps = 1/97 (1%)
Query: 82 KRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCN 141
+++ ++ +T E K YIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ LVPGC+
Sbjct: 110 RKETEEKSSTDEDEASK-GYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCD 168
Query: 142 KITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
K+TGKA +LDEIINYVQSLQ QVEFLSM++A+++P L
Sbjct: 169 KVTGKAMVLDEIINYVQSLQNQVEFLSMRIASMSPVL 205
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/116 (63%), Positives = 87/116 (75%), Gaps = 12/116 (10%)
Query: 75 VGRESFKKRKADKVQ--------NTKASEVQKHD----YIHVRARRGQATDSHSLAERVR 122
VG + +++KA +V KA E + YIHVRARRGQATDSHSLAERVR
Sbjct: 139 VGLKGLEEKKARRVVLHQHDDDVKKKAKEAAGGEPPAGYIHVRARRGQATDSHSLAERVR 198
Query: 123 REKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
REKISERMK LQ LVPGC+K+TGKA MLDEII+YVQSLQ QVEFLSMKLA+++P +
Sbjct: 199 REKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFLSMKLASLSPLM 254
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 77/85 (90%), Gaps = 1/85 (1%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
YIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ LVPGC+K+TGKA +LDEIINYVQSL
Sbjct: 119 YIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSL 178
Query: 161 QRQVEFLSMKLAAVNPRL-DFNVDN 184
Q QVEFLSM++A+++P L F +D+
Sbjct: 179 QNQVEFLSMRIASMSPVLYGFGLDS 203
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 74/91 (81%), Gaps = 5/91 (5%)
Query: 97 QKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 156
QK DYIHVRARRGQATDSHSLAERVRRE+ISERM+YLQ+LVPGC+K+TGKAGMLDEIINY
Sbjct: 139 QKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINY 198
Query: 157 VQSLQRQVEFLSMKLAAVNPRLDFNVDNLFA 187
VQSLQ+QVE A D NLF+
Sbjct: 199 VQSLQKQVEVNGTAAA-----WDIGSQNLFS 224
>gi|356511528|ref|XP_003524477.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 324
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/76 (86%), Positives = 71/76 (93%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
YIHVRARRGQATDSHSLAERVRREKIS+RM LQ LVPGC+K+TGKA +LDEIINYVQSL
Sbjct: 135 YIHVRARRGQATDSHSLAERVRREKISKRMTTLQRLVPGCDKVTGKALVLDEIINYVQSL 194
Query: 161 QRQVEFLSMKLAAVNP 176
Q QVEFLSMKLA+VNP
Sbjct: 195 QNQVEFLSMKLASVNP 210
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/144 (52%), Positives = 97/144 (67%), Gaps = 15/144 (10%)
Query: 55 AVDVKGKVSVAALNEKVSAAVGRE-SFKKRKADKVQNTKASEVQKHD------------Y 101
+++ G S+ + E V + + S K ++ + V + K ++H Y
Sbjct: 95 SIERSGTTSLGSAQEMVGKQLHMDGSRKHQRNNNVASVKEKRPREHGGADVDVKEAPAGY 154
Query: 102 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 161
IHVRA+RGQA DSHSLAERVRREKISE+M LQ LVPGC+K+TGKA MLDEII+YVQSLQ
Sbjct: 155 IHVRAKRGQARDSHSLAERVRREKISEKMLLLQSLVPGCDKVTGKAMMLDEIISYVQSLQ 214
Query: 162 RQVEFLSMKLAAVNPRL--DFNVD 183
QVEFLSMKLA++NP + +F VD
Sbjct: 215 NQVEFLSMKLASLNPMMMYEFGVD 238
>gi|147821091|emb|CAN75381.1| hypothetical protein VITISV_027596 [Vitis vinifera]
Length = 328
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/149 (51%), Positives = 86/149 (57%), Gaps = 50/149 (33%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERV--------------------------- 121
+ +K +E K DYIHVRARRGQATDSHSLAERV
Sbjct: 142 EESKPAEQSKQDYIHVRARRGQATDSHSLAERVMQFYTLLIFCFLVVPQMPKLKRIGLSW 201
Query: 122 -----------------RREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RREKISERMK LQDLVPGCNK+ GKA +LDEIINY+QSLQRQV
Sbjct: 202 NSRSRCRCIGVSVYINARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 261
Query: 165 EFLSMKLAAVNPRLDFNVDNLFAKEAFPV 193
EFLSMKL AVN R++ V E FP+
Sbjct: 262 EFLSMKLEAVNSRMNHTV------EGFPL 284
>gi|15241896|ref|NP_201067.1| transcription factor bHLH79 [Arabidopsis thaliana]
gi|75311612|sp|Q9LV17.1|BH079_ARATH RecName: Full=Transcription factor bHLH79; AltName: Full=Basic
helix-loop-helix protein 79; Short=AtbHLH79; Short=bHLH
79; AltName: Full=Transcription factor EN 81; AltName:
Full=bHLH transcription factor bHLH079
gi|8809657|dbj|BAA97208.1| unnamed protein product [Arabidopsis thaliana]
gi|18175779|gb|AAL59926.1| unknown protein [Arabidopsis thaliana]
gi|21536811|gb|AAM61143.1| unknown [Arabidopsis thaliana]
gi|21689825|gb|AAM67556.1| unknown protein [Arabidopsis thaliana]
gi|332010247|gb|AED97630.1| transcription factor bHLH79 [Arabidopsis thaliana]
Length = 281
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 68/76 (89%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DYIHVRARRGQATD HSLAER RREKISE+M LQD++PGCNKI GKA +LDEIINY+QS
Sbjct: 149 DYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQS 208
Query: 160 LQRQVEFLSMKLAAVN 175
LQRQVEFLSMKL VN
Sbjct: 209 LQRQVEFLSMKLEVVN 224
>gi|297797231|ref|XP_002866500.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312335|gb|EFH42759.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 68/76 (89%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DYIHVRARRGQATD HSLAER RREKISE+M LQD++PGCNKI GKA +LDEIINY+QS
Sbjct: 150 DYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQS 209
Query: 160 LQRQVEFLSMKLAAVN 175
LQRQVEFLSMKL VN
Sbjct: 210 LQRQVEFLSMKLEVVN 225
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/83 (75%), Positives = 73/83 (87%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DYIH+R+RRGQAT+SHSLAERVRREKISERMK LQDLVPGCNK+TGKA +L+ IINYVQS
Sbjct: 108 DYIHLRSRRGQATNSHSLAERVRREKISERMKVLQDLVPGCNKVTGKALVLENIINYVQS 167
Query: 160 LQRQVEFLSMKLAAVNPRLDFNV 182
LQ QVE LS+KL +V R F++
Sbjct: 168 LQSQVEILSVKLTSVLSRCHFDL 190
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 84/114 (73%)
Query: 70 KVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISER 129
+VS + ++ R+ +V++ + E + + +HVRARRGQATDSHSLAERVRR KI+ER
Sbjct: 123 RVSESGSKKRKSSRRGKRVKSNEEEEEKTREVVHVRARRGQATDSHSLAERVRRGKINER 182
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVD 183
++ LQD+VPGC K G A MLDEIINYVQSLQ QVEFLSMKL A + DFN +
Sbjct: 183 LRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNAE 236
>gi|297606176|ref|NP_001058071.2| Os06g0613500 [Oryza sativa Japonica Group]
gi|255677227|dbj|BAF19985.2| Os06g0613500, partial [Oryza sativa Japonica Group]
Length = 178
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 88/119 (73%), Gaps = 3/119 (2%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
ARRGQATDSHSLAER RREKI+ RM+ L++LVPGC+K++G A +LDEIIN+VQSLQRQVE
Sbjct: 1 ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 60
Query: 166 FLSMKLAAVNPRLDF-NVDNLFAKEAFPVCPSNFPTIGMSSE-MTHPAAYLHQFNSLQQ 222
+LSM+LAAVNPR+DF +DN E + N+ GM E +T P +H +L Q
Sbjct: 61 YLSMRLAAVNPRVDFGGLDNFLTTECGRITGLNYKN-GMDLEQVTWPDMGVHGARNLMQ 118
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 94/151 (62%), Gaps = 7/151 (4%)
Query: 33 PGFEASYAISRTSSSPPAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTK 92
P F+A I +PE +V+ K+ + GR K+ K++ + K
Sbjct: 92 PIFQAENEIHEGKKRKSVDLPETSSANSTPAVSESGSKIKHSSGRG--KRVKSNVTEEEK 149
Query: 93 ASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDE 152
A EV +HVRARRGQATDSHSLAERVRR KI+E+++ LQ++VPGC K G A MLDE
Sbjct: 150 AKEV-----VHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDE 204
Query: 153 IINYVQSLQRQVEFLSMKLAAVNPRLDFNVD 183
IINYVQSLQ QVEFLS+KL A + DFN +
Sbjct: 205 IINYVQSLQHQVEFLSLKLTAASTFYDFNSE 235
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 86/123 (69%), Gaps = 8/123 (6%)
Query: 61 KVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAER 120
+VS + N K S+ G+ + + +K + EV +HVRARRGQATDSHSLAER
Sbjct: 113 QVSESGFNTKYSSGKGK---RLKSLEKEEEKSTREV-----VHVRARRGQATDSHSLAER 164
Query: 121 VRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 180
VRR KI+ER++ L+D+VPGC K G A MLDEIINYVQSLQ QVEFLSMKLAA + DF
Sbjct: 165 VRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLAAASSFYDF 224
Query: 181 NVD 183
N +
Sbjct: 225 NSE 227
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 94/151 (62%), Gaps = 7/151 (4%)
Query: 33 PGFEASYAISRTSSSPPAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTK 92
P F+A I +PE +V+ K+ + GR K+ K++ + K
Sbjct: 91 PIFQAENEIHEGKKRKSMDLPETSSANSTPAVSESGSKIKHSSGRG--KRVKSNVTEEEK 148
Query: 93 ASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDE 152
A EV +HVRARRGQATDSHSLAERVRR KI+E+++ LQ++VPGC K G A MLDE
Sbjct: 149 AKEV-----VHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDE 203
Query: 153 IINYVQSLQRQVEFLSMKLAAVNPRLDFNVD 183
IINYVQSLQ QVEFLS+KL A + DFN +
Sbjct: 204 IINYVQSLQHQVEFLSLKLTAASTFYDFNSE 234
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 80/101 (79%), Gaps = 5/101 (4%)
Query: 81 KKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
K++++++ +N K EV IHVRA+RGQATDSHSLAERVRREKI+E+++ LQDLVPGC
Sbjct: 122 KRKRSNERENNKPREV-----IHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGC 176
Query: 141 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 181
K G A MLD IINYVQSLQ Q+EFLSMKL+A + DFN
Sbjct: 177 YKTMGMAVMLDVIINYVQSLQNQIEFLSMKLSAASTFYDFN 217
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/76 (81%), Positives = 66/76 (86%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
DYIHVRARRGQATDSHSLAERVRREKI ERMK LQDLVPGC+K+TGKA MLDEIINYVQS
Sbjct: 252 DYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQS 311
Query: 160 LQRQVEFLSMKLAAVN 175
LQRQVE + L +
Sbjct: 312 LQRQVEVRRVCLLCIG 327
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 80/101 (79%), Gaps = 5/101 (4%)
Query: 81 KKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
K++++++ +N K EV IHVRA+RGQATDSHSLAERVRREKI+E+++ LQDLVPGC
Sbjct: 105 KRKRSNERENNKPREV-----IHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGC 159
Query: 141 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 181
K G A MLD IINYVQSLQ Q+EFLSMKL+A + DFN
Sbjct: 160 YKTMGMAVMLDVIINYVQSLQNQIEFLSMKLSAASTFYDFN 200
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 80/101 (79%), Gaps = 5/101 (4%)
Query: 81 KKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
K++++++ +N K EV IHVRA+RGQATDSHSLAERVRREKI+E+++ LQDLVPGC
Sbjct: 101 KRKRSNERENNKPREV-----IHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGC 155
Query: 141 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 181
K G A MLD IINYVQSLQ Q+EFLSMKL+A + DFN
Sbjct: 156 YKTMGMAVMLDVIINYVQSLQNQIEFLSMKLSAASTFYDFN 196
>gi|449450566|ref|XP_004143033.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/105 (63%), Positives = 82/105 (78%), Gaps = 3/105 (2%)
Query: 70 KVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISER 129
++SA + K+ QN +A K +YIHV+ARRG+A ++HSLAERVRREKISER
Sbjct: 174 RLSANFNTKPDSKKAKGGSQNVQAP---KENYIHVQARRGRAANNHSLAERVRREKISER 230
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAV 174
MK LQ LVPGC++ITGK +LDEIINYVQSLQ+QVEFLSMKLA+V
Sbjct: 231 MKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQQVEFLSMKLASV 275
>gi|295913621|gb|ADG58055.1| transcription factor [Lycoris longituba]
Length = 207
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/68 (88%), Positives = 65/68 (95%)
Query: 94 SEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEI 153
+E +K DYIHVRARRG+ATDSHSLAERVRRE+ISERMKYL+ LVPGCNKITGKAGMLDEI
Sbjct: 140 NEDKKQDYIHVRARRGEATDSHSLAERVRRERISERMKYLEGLVPGCNKITGKAGMLDEI 199
Query: 154 INYVQSLQ 161
INYVQSLQ
Sbjct: 200 INYVQSLQ 207
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats.
Identities = 62/67 (92%), Positives = 63/67 (94%)
Query: 99 HDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQ 158
DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC K+TGKA MLDEIINYVQ
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQ 60
Query: 159 SLQRQVE 165
LQRQVE
Sbjct: 61 FLQRQVE 67
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/99 (64%), Positives = 76/99 (76%), Gaps = 2/99 (2%)
Query: 83 RKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 142
R+ + +N + E + + +HVRARRGQATDSHS+AERVRR KI+ER+K LQD+VPGC K
Sbjct: 130 RRGKRSKNRE--EEKDREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYK 187
Query: 143 ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 181
G A MLDEIINYVQSLQ QVEFLSMKL A + DFN
Sbjct: 188 TMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFN 226
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 106/194 (54%), Gaps = 22/194 (11%)
Query: 4 QQVKPDPAFENGWPD----------LGKIVAPAAGYGFGP----GFEASYAISRTSSSPP 49
Q P P F W + +I+ P + F P G + + R +
Sbjct: 47 QTAVPSPRFLENWGENFQGIFSHHQANQIITPTSSPVFEPKNLFGNDLHGSKKRKLENND 106
Query: 50 AVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRG 109
A + + +VS +N K + G+E + +K D K EV +HVRARRG
Sbjct: 107 AYESSSGNSTPQVSENGINTKNNN--GKEK-RSKKGDTNDGEKPREV-----VHVRARRG 158
Query: 110 QATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
QATDSHS+AER+RR KI+ER++ LQD+VPGC K G A MLDEIINYVQSLQ QVEFLSM
Sbjct: 159 QATDSHSVAERIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSM 218
Query: 170 KLAAVNPRLDFNVD 183
KL A + DFN D
Sbjct: 219 KLTAASSYHDFNSD 232
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 69/84 (82%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
D +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G A MLDEIINYVQS
Sbjct: 152 DVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQS 211
Query: 160 LQRQVEFLSMKLAAVNPRLDFNVD 183
LQ QVEFLSMKL A + DFN +
Sbjct: 212 LQNQVEFLSMKLTAASTFYDFNAE 235
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/85 (72%), Positives = 69/85 (81%)
Query: 99 HDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQ 158
+ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G A MLDEIINYVQ
Sbjct: 142 REVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQ 201
Query: 159 SLQRQVEFLSMKLAAVNPRLDFNVD 183
SLQ QVEFLSMKL A + DFN D
Sbjct: 202 SLQNQVEFLSMKLTAASQYYDFNSD 226
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/80 (76%), Positives = 67/80 (83%)
Query: 102 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 161
+HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 143 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 202
Query: 162 RQVEFLSMKLAAVNPRLDFN 181
QVEFLSMKL A + DFN
Sbjct: 203 NQVEFLSMKLTAASSFYDFN 222
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/78 (82%), Positives = 69/78 (88%), Gaps = 1/78 (1%)
Query: 88 VQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKA 147
+QN KA+ DYIHVRAR+GQATDSHSL ERVRREKISERMK LQ+LVPGCNK+TGKA
Sbjct: 117 IQN-KANSKPPEDYIHVRARKGQATDSHSLVERVRREKISERMKLLQNLVPGCNKVTGKA 175
Query: 148 GMLDEIINYVQSLQRQVE 165
MLDEIINYVQSLQRQVE
Sbjct: 176 FMLDEIINYVQSLQRQVE 193
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/79 (77%), Positives = 66/79 (83%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
HVRARRGQATDSHS+AERVRR KI+ER+K LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 163 QVEFLSMKLAAVNPRLDFN 181
QVEFLSMKL A + DFN
Sbjct: 206 QVEFLSMKLTAASSYYDFN 224
>gi|449520908|ref|XP_004167474.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 81/105 (77%), Gaps = 3/105 (2%)
Query: 70 KVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISER 129
++SA + K+ QN +A K +YIHV+ARRG+A ++HSLAERVRREKISER
Sbjct: 174 RLSANFNTKPDSKKAKGGSQNVQAP---KENYIHVQARRGRAANNHSLAERVRREKISER 230
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAV 174
MK LQ LVPGC++ITGK +LDEIINYVQSLQ+QVE LSMKLA+V
Sbjct: 231 MKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQQVELLSMKLASV 275
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/79 (77%), Positives = 66/79 (83%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
HVRARRGQATDSHS+AERVRR KI+ER+K LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 163 QVEFLSMKLAAVNPRLDFN 181
QVEFLSMKL A + DFN
Sbjct: 206 QVEFLSMKLTAASSYYDFN 224
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 84/119 (70%), Gaps = 5/119 (4%)
Query: 63 SVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVR 122
SV+ K+ GR K+ + ++ K+++V +HVRARRGQATDSHSLAERVR
Sbjct: 116 SVSESESKIKNCSGRGKRVKKNMMEEEDKKSTQV-----VHVRARRGQATDSHSLAERVR 170
Query: 123 REKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 181
R KI+E++K LQ++VPGC K G A MLDEIINYVQSLQ QVEFLSMKL A + DFN
Sbjct: 171 RGKINEKLKCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLTAASTFYDFN 229
>gi|30695832|ref|NP_567057.2| transcription factor bHLH60 [Arabidopsis thaliana]
gi|122214701|sp|Q3EAI1.1|BH060_ARATH RecName: Full=Transcription factor bHLH60; AltName: Full=Basic
helix-loop-helix protein 60; Short=AtbHLH60; Short=bHLH
60; AltName: Full=Transcription factor EN 91; AltName:
Full=bHLH transcription factor bHLH060
gi|332646181|gb|AEE79702.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 426
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 82/142 (57%), Gaps = 47/142 (33%)
Query: 95 EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK------------ 142
E +K Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ+LVPGC+K
Sbjct: 195 ENEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKV 254
Query: 143 -----------------------------------ITGKAGMLDEIINYVQSLQRQVEFL 167
I G A +LDEIIN+VQSLQRQVE L
Sbjct: 255 CFGVHLLMISGKKVAIFLWKVSCEDLIDCSFSPPRIQGTALVLDEIINHVQSLQRQVEML 314
Query: 168 SMKLAAVNPRLDFNVDNLFAKE 189
SM+LAAVNPR+DFN+D + A E
Sbjct: 315 SMRLAAVNPRIDFNLDTILASE 336
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/79 (77%), Positives = 66/79 (83%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
HVRARRGQATDSHS+AERVRR KI+ER+K LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 135 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 194
Query: 163 QVEFLSMKLAAVNPRLDFN 181
QVEFLSMKL A + DFN
Sbjct: 195 QVEFLSMKLTAASSYYDFN 213
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 74/100 (74%), Gaps = 5/100 (5%)
Query: 82 KRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCN 141
KR K + K EV +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC
Sbjct: 56 KRTKSKEDDEKPKEV-----VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCY 110
Query: 142 KITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 181
K G A MLDEIINYVQSLQ QVEFLSMKL A + DFN
Sbjct: 111 KTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFN 150
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 69/78 (88%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
++HVRARRG+ATDSHSLAER RREKISERMK+LQ LVPGC+KI GK +LDEIINYV+SL
Sbjct: 105 FVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSL 164
Query: 161 QRQVEFLSMKLAAVNPRL 178
Q QVEFL KLA+++P L
Sbjct: 165 QNQVEFLVGKLASISPML 182
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 69/78 (88%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
++HVRARRG+ATDSHSLAER RREKISERMK+LQ LVPGC+KI GK +LDEIINYV+SL
Sbjct: 39 FVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSL 98
Query: 161 QRQVEFLSMKLAAVNPRL 178
Q QVEFL KLA+++P L
Sbjct: 99 QNQVEFLVGKLASISPML 116
>gi|89257428|gb|ABD64920.1| bHLH transcription factor, putative [Brassica oleracea]
Length = 155
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/102 (66%), Positives = 77/102 (75%), Gaps = 4/102 (3%)
Query: 80 FKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPG 139
KK +AD +TK E K DYIHVRARRGQ DSH AERVRREKISE + LQDLVP
Sbjct: 1 MKKLEAD---DTKPPEPPK-DYIHVRARRGQPADSHRFAERVRREKISEMLTLLQDLVPD 56
Query: 140 CNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 181
++ITGKA LDEIINYVQSL+RQVE L MKLA +NPR++ N
Sbjct: 57 SSRITGKADSLDEIINYVQSLKRQVELLYMKLATINPRMESN 98
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/80 (76%), Positives = 67/80 (83%)
Query: 102 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 161
+HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 1037 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 1096
Query: 162 RQVEFLSMKLAAVNPRLDFN 181
QVEFLSMKL A + DFN
Sbjct: 1097 NQVEFLSMKLTAASSFYDFN 1116
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 68/78 (87%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
++HVRARRG+ATDSHSLAER RREKISERMK LQ LVPGC+KI GK +LDEIINYV+SL
Sbjct: 105 FVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYVKSL 164
Query: 161 QRQVEFLSMKLAAVNPRL 178
Q QVEFL KLA+++P L
Sbjct: 165 QNQVEFLVGKLASISPML 182
>gi|168061161|ref|XP_001782559.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665966|gb|EDQ52634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 154
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/116 (61%), Positives = 83/116 (71%), Gaps = 4/116 (3%)
Query: 95 EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 154
E K D+I VRARRGQATDS S+AE VR EKI +RMKYLQDLVPGC K+TGK MLDEII
Sbjct: 2 EYSKQDFIRVRARRGQATDSLSVAEWVRCEKIRKRMKYLQDLVPGCRKVTGKTDMLDEII 61
Query: 155 NYVQSLQRQVEFLSMKLAAVNPR-LD-FNVDNLFAKEAFPVCPSNFPTIGMSSEMT 208
NYVQSLQ Q E LSMKL AV+P LD +++L + E V S + I +S+ T
Sbjct: 62 NYVQSLQCQAESLSMKLGAVHPAPLDHLTLESLLSIE--EVLQSQWSNILCTSDST 115
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 68/78 (87%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
++HVRARRG+ATDSHSLAER RREKISERMK LQ LVPGC+K+ GK +LDEIINYV+SL
Sbjct: 105 FVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYVKSL 164
Query: 161 QRQVEFLSMKLAAVNPRL 178
Q QVEFL KLA+++P L
Sbjct: 165 QNQVEFLVGKLASISPML 182
>gi|356513103|ref|XP_003525253.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 246
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 82/112 (73%), Gaps = 7/112 (6%)
Query: 70 KVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISER 129
K + GR K+ K + +++ K +EV +HVRA+RGQATDSHSLAERVRR KI+E+
Sbjct: 100 KTKNSCGRG--KRVKRNMIEDKKPNEV-----VHVRAKRGQATDSHSLAERVRRGKINEK 152
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 181
++ LQ++VPGC K G A MLDEIINYVQSLQ QVEFLSMKL A + DFN
Sbjct: 153 LRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLNAASTYYDFN 204
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/80 (75%), Positives = 66/80 (82%)
Query: 102 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 161
+HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 146 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEIINYVQSLQ 205
Query: 162 RQVEFLSMKLAAVNPRLDFN 181
QVE LSMKL A + DFN
Sbjct: 206 NQVELLSMKLTAASSFYDFN 225
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/79 (75%), Positives = 66/79 (83%)
Query: 102 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 161
+HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G A MLDEIINYVQSLQ
Sbjct: 1026 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 1085
Query: 162 RQVEFLSMKLAAVNPRLDF 180
QVEFLSMKL A + DF
Sbjct: 1086 NQVEFLSMKLNAASSFYDF 1104
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 73/89 (82%)
Query: 102 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 161
IHVRA+RGQATDSHS+AERVRREKI+ +++ LQDLVPGC+K G A ML+EIINYV SLQ
Sbjct: 147 IHVRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEIINYVHSLQ 206
Query: 162 RQVEFLSMKLAAVNPRLDFNVDNLFAKEA 190
QVEFLSM+LAA + D N++ +K+A
Sbjct: 207 NQVEFLSMELAAASCSYDLNLETESSKKA 235
>gi|356554137|ref|XP_003545405.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 305
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 88/149 (59%), Gaps = 7/149 (4%)
Query: 33 PGFEASYAISRTSSSPPAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTK 92
P F+A I +PE V V+ K + GR +V+N
Sbjct: 89 PIFQAENEIHEGKKRKSMDLPETSSVNSTPKVSESGNKFKHSSGR-------GKRVKNNV 141
Query: 93 ASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDE 152
E + + ++VRAR GQATDS +LAERVRR KI+E+++YLQ++VPGC K G A MLDE
Sbjct: 142 TEEEKAKEVVNVRARSGQATDSRNLAERVRRGKINEKLRYLQNIVPGCYKTMGMAVMLDE 201
Query: 153 IINYVQSLQRQVEFLSMKLAAVNPRLDFN 181
IINYVQSLQ QVEFLS+KL A + DFN
Sbjct: 202 IINYVQSLQNQVEFLSLKLTAPSTFYDFN 230
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 77/101 (76%), Gaps = 5/101 (4%)
Query: 81 KKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
K+ K + +++ K +EV +HVRA+RGQATDSHSLAERVRR KI+E+++ LQ++VPGC
Sbjct: 115 KRVKRNSIEDKKPNEV-----VHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGC 169
Query: 141 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 181
K G A MLDEIINYVQSLQ QVEFLSMKL A + D N
Sbjct: 170 YKTMGMAIMLDEIINYVQSLQHQVEFLSMKLTAASTYYDLN 210
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 71/90 (78%), Gaps = 1/90 (1%)
Query: 93 ASEVQK-HDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLD 151
E QK D +HVRA+RGQATDSHSLAERVRREKI+ER+K LQDLVPGC K G A MLD
Sbjct: 35 GDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLD 94
Query: 152 EIINYVQSLQRQVEFLSMKLAAVNPRLDFN 181
II+YV+SLQ Q+EFLSMKL+A + D N
Sbjct: 95 VIIDYVRSLQNQIEFLSMKLSAASACYDLN 124
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 71/90 (78%), Gaps = 1/90 (1%)
Query: 93 ASEVQK-HDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLD 151
E QK D +HVRA+RGQATDSHSLAERVRREKI+ER+K LQDLVPGC K G A MLD
Sbjct: 92 GDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLD 151
Query: 152 EIINYVQSLQRQVEFLSMKLAAVNPRLDFN 181
II+YV+SLQ Q+EFLSMKL+A + D N
Sbjct: 152 VIIDYVRSLQNQIEFLSMKLSAASACYDLN 181
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 71/90 (78%), Gaps = 1/90 (1%)
Query: 93 ASEVQK-HDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLD 151
E QK D +HVRA+RGQATDSHSLAERVRREKI+ER+K LQDLVPGC K G A MLD
Sbjct: 92 GDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLD 151
Query: 152 EIINYVQSLQRQVEFLSMKLAAVNPRLDFN 181
II+YV+SLQ Q+EFLSMKL+A + D N
Sbjct: 152 VIIDYVRSLQNQIEFLSMKLSAASACYDLN 181
>gi|255563356|ref|XP_002522681.1| hypothetical protein RCOM_0886600 [Ricinus communis]
gi|223538157|gb|EEF39768.1| hypothetical protein RCOM_0886600 [Ricinus communis]
Length = 77
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/72 (84%), Positives = 66/72 (91%), Gaps = 2/72 (2%)
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMT 208
MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN++NL AKE FP CP+NFP IGMSS+MT
Sbjct: 1 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNINNLIAKETFPPCPTNFPAIGMSSDMT 60
Query: 209 HPAAYLHQFNSL 220
+P AYL QFNSL
Sbjct: 61 NP-AYL-QFNSL 70
>gi|224127674|ref|XP_002329336.1| predicted protein [Populus trichocarpa]
gi|222870790|gb|EEF07921.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 76/101 (75%), Gaps = 5/101 (4%)
Query: 81 KKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
KK + + + KA EV IHVRA+RGQATDSHS+AERVRREKI+ +++ LQDLVPGC
Sbjct: 130 KKGENKEKEGDKAEEV-----IHVRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGC 184
Query: 141 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 181
++ G A ML+EIINYV SLQ QVEFLSM+LAA + D N
Sbjct: 185 HRSMGMAVMLEEIINYVHSLQNQVEFLSMELAAASSSNDLN 225
>gi|168024073|ref|XP_001764561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684139|gb|EDQ70543.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 62
Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats.
Identities = 59/62 (95%), Positives = 60/62 (96%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC K+TGKA MLDEIINYVQSLQRQ
Sbjct: 1 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQ 60
Query: 164 VE 165
VE
Sbjct: 61 VE 62
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 66/79 (83%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
HVRARRGQATDSHSLAERVRR KI+E+++ LQ++VPGC K G A MLDEIINYVQSLQ
Sbjct: 156 HVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQH 215
Query: 163 QVEFLSMKLAAVNPRLDFN 181
QVEFLS+KL A + DFN
Sbjct: 216 QVEFLSLKLTAASTYYDFN 234
>gi|296087271|emb|CBI33645.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 75/108 (69%), Gaps = 5/108 (4%)
Query: 83 RKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 142
R +DK K EV IHVRARRGQATD+HS+AERVRREKI R++ LQDLVPGC K
Sbjct: 186 RNSDKELLDKPDEV-----IHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYK 240
Query: 143 ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEA 190
G A MLDEIINYV SLQ QVEFLS +LAA + +FN + K A
Sbjct: 241 NKGMAVMLDEIINYVHSLQNQVEFLSRELAAASSLHNFNSETEAIKNA 288
>gi|255543172|ref|XP_002512649.1| conserved hypothetical protein [Ricinus communis]
gi|223548610|gb|EEF50101.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/94 (61%), Positives = 73/94 (77%), Gaps = 3/94 (3%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
Y+HVRARRG+ATD HSLAERVRR+KIS RMK LQ LVPGC+K+TGKA +LDEII +V SL
Sbjct: 161 YVHVRARRGEATDPHSLAERVRRKKISVRMKLLQSLVPGCDKLTGKAQILDEIIRHVLSL 220
Query: 161 QRQVEFLSMKLAAVN---PRLDFNVDNLFAKEAF 191
Q QVEFL+ K + N +++ ++ L AKE +
Sbjct: 221 QNQVEFLAAKFTSENGIANEVNYEMNTLVAKELY 254
>gi|218194642|gb|EEC77069.1| hypothetical protein OsI_15464 [Oryza sativa Indica Group]
Length = 403
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 76/116 (65%), Gaps = 9/116 (7%)
Query: 121 VRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 180
VRRE+ISERMK LQ LVPGCNKITGKA MLDEIINYVQSLQRQVEFLSMKLA +NP+LDF
Sbjct: 204 VRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLATMNPQLDF 263
Query: 181 NVDNLFAKEA----FPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDL 232
+ + +K+ P PS+ PT + T A F +C LDL
Sbjct: 264 DSHYMPSKDMSHMPVPAYPSSDPTTTTAFSYTGSPATADPFT-----VYNCWELDL 314
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 67/81 (82%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
+ IHVRA+RGQATDSHS+AER+RREKI+ +++ LQD+VPGC+K G A ML+EIINYV S
Sbjct: 154 EVIHVRAKRGQATDSHSIAERIRREKINNKLRCLQDIVPGCHKSMGMAVMLEEIINYVHS 213
Query: 160 LQRQVEFLSMKLAAVNPRLDF 180
LQ QVEFLSM+LAA + D
Sbjct: 214 LQNQVEFLSMELAAASCSNDL 234
>gi|125526611|gb|EAY74725.1| hypothetical protein OsI_02616 [Oryza sativa Indica Group]
Length = 467
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/101 (60%), Positives = 72/101 (71%), Gaps = 10/101 (9%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKI---------SERMKYLQDLVPGCN-KITGKAGM 149
DYIHVRARRGQATDSHSLAERV + S + + + + ++TGKA M
Sbjct: 270 DYIHVRARRGQATDSHSLAERVNTAGVYAAIHNFVFSSILAFADAIAAVFHLQVTGKAVM 329
Query: 150 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEA 190
LDEIINYVQSLQRQVEFLSMKL+ VNP+LDF+VDN K+A
Sbjct: 330 LDEIINYVQSLQRQVEFLSMKLSTVNPQLDFDVDNFIPKDA 370
>gi|147810591|emb|CAN71967.1| hypothetical protein VITISV_017400 [Vitis vinifera]
Length = 271
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 76/113 (67%), Gaps = 10/113 (8%)
Query: 83 RKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 142
R +DK K EV IHVRARRGQATD+HS+AERVRREKI R++ LQDLVPGC K
Sbjct: 132 RNSDKELLDKPDEV-----IHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYK 186
Query: 143 I-----TGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEA 190
+ G A MLDEIINYV SLQ QVEFLS +LAA + +FN + K A
Sbjct: 187 VYDPQNKGMAVMLDEIINYVHSLQNQVEFLSRELAAASSLHNFNSETEAIKNA 239
>gi|341941279|gb|AEL12217.1| putative cryptochrome-interacting basic helix-loop-helix 5 [Beta
vulgaris]
Length = 225
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 84/137 (61%), Gaps = 7/137 (5%)
Query: 52 VPEAVDVKGKVSVAALNEKVSAAVGRESFKKR--KADKVQNT-----KASEVQKHDYIHV 104
V AV K SV + R+ F++ K D V + K + V + +++V
Sbjct: 77 VLTAVSDNNKNSVHFQETSQDKKISRQRFRRNDMKEDNVCRSGSLARKDATVNEDGFVYV 136
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RARRG+A DSHSLAERVRR+KIS +MK LQ LVPGC+K TGK +LD IINY+ SLQ QV
Sbjct: 137 RARRGEAVDSHSLAERVRRQKISSKMKLLQSLVPGCDKTTGKVPILDTIINYIHSLQDQV 196
Query: 165 EFLSMKLAAVNPRLDFN 181
+ L +LA V+P D N
Sbjct: 197 KSLMEELALVDPTFDVN 213
>gi|356564005|ref|XP_003550247.1| PREDICTED: transcription factor BEE 1-like [Glycine max]
Length = 268
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 64/77 (83%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RARRGQATDSH+LAERVRR KI+E+++YLQ++VPGC K A MLDEIINYVQSLQ QV
Sbjct: 152 RARRGQATDSHNLAERVRRGKINEKLRYLQNIVPGCYKTMSMAVMLDEIINYVQSLQHQV 211
Query: 165 EFLSMKLAAVNPRLDFN 181
EFLS++L A + DFN
Sbjct: 212 EFLSLELTAASTFYDFN 228
>gi|414591362|tpg|DAA41933.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 384
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 86/157 (54%), Gaps = 34/157 (21%)
Query: 44 TSSSPPAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIH 103
T+++P + PE + + K+S A ++ G K K + K DYIH
Sbjct: 223 TTATPKSREPETMAKRRKLSTDAARDEA----GSHGNGKGKEVAPAAEPEPQPPK-DYIH 277
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCN---------------------- 141
VRARRGQATDSHSLAERVRREKISERMK LQDLVPGC+
Sbjct: 278 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVSKHRRPLLKIRLKTHAYFNF 337
Query: 142 -------KITGKAGMLDEIINYVQSLQRQVEFLSMKL 171
K+TGKA MLDEIINYVQSLQ QVE + L
Sbjct: 338 QRLLDLVKVTGKAVMLDEIINYVQSLQCQVEVRAYDL 374
>gi|295913612|gb|ADG58051.1| transcription factor [Lycoris longituba]
Length = 95
Score = 115 bits (288), Expect = 3e-23, Method: Composition-based stats.
Identities = 53/60 (88%), Positives = 56/60 (93%)
Query: 119 ERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
ERVRRE+I ERMKYLQ LVPGCNKITGKAGML+EIINYVQSLQRQVEFLSMKLA VNP +
Sbjct: 3 ERVRRERIGERMKYLQGLVPGCNKITGKAGMLEEIINYVQSLQRQVEFLSMKLAGVNPEI 62
>gi|3540186|gb|AAC34336.1| Hypothetical protein [Arabidopsis thaliana]
Length = 339
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 90/159 (56%), Gaps = 29/159 (18%)
Query: 52 VPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNT------KASEVQKHDYIHVR 105
+PEA K +V E +S KK K D+ + T ++ E K +YIH+R
Sbjct: 149 LPEAESQWNKKAVEEFQEDPQRG-NDQSQKKHKNDQSKETVNKESSQSEEAPKENYIHMR 207
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
ARRGQAT+SHSLAER ITGKA MLDEIINYVQSLQ+QVE
Sbjct: 208 ARRGQATNSHSLAER----------------------ITGKAVMLDEIINYVQSLQQQVE 245
Query: 166 FLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMS 204
FLSMKLA VNP ++ ++D + AK+ N PT+G++
Sbjct: 246 FLSMKLATVNPEINIDIDRILAKDLLQSRDRNTPTLGLN 284
>gi|224057820|ref|XP_002299340.1| predicted protein [Populus trichocarpa]
gi|222846598|gb|EEE84145.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 71/93 (76%), Gaps = 2/93 (2%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
Y+HVRARRG+ATDSHSLAERVRRE+IS +MK LQ LVPGC++ITGKA +LDEII YVQSL
Sbjct: 74 YVHVRARRGEATDSHSLAERVRRERISAKMKLLQSLVPGCDQITGKALILDEIIRYVQSL 133
Query: 161 QRQVEFLSMKLAAVNPRL--DFNVDNLFAKEAF 191
+ ++ L +L VN + DF V+ +A+
Sbjct: 134 KDRIGSLEAELVLVNEMVINDFKVNYNMETQAW 166
>gi|224101643|ref|XP_002312365.1| predicted protein [Populus trichocarpa]
gi|222852185|gb|EEE89732.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 98/178 (55%), Gaps = 15/178 (8%)
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
MK+LQDLVPGC+K+TGKA MLDEIINYVQSLQRQVEFLSMKLA VNPRLD N++ L AK+
Sbjct: 1 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLAKD 60
Query: 190 AFPVCPSNFPTIGMSSEMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAP 249
+ ++ S EM P AY S QA G+ N S++ R S
Sbjct: 61 ILQLHAVPPSSLAFSLEM--PMAYPPSHPS---QAGLIPTAFPGMNNHSDIICRTINSQL 115
Query: 250 VSAPETFIDSSCYPHLQPSSNWDSDLQNFYNV-----ASFPSQQFTGTLEASNLKMEM 302
F + + P++ WD +L+N + A SQ L +LK+E+
Sbjct: 116 TPMTAGFKEPAQLPNV-----WDDELRNVVQMSYETSAPHDSQDVNKPLPPGHLKVEL 168
>gi|224072488|ref|XP_002303756.1| predicted protein [Populus trichocarpa]
gi|222841188|gb|EEE78735.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/65 (78%), Positives = 59/65 (90%)
Query: 101 YIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
Y+HVRARRG+ATDSHSLAERVRREKIS RMK LQ LVPGC+KITGKA +LDEII+YVQ L
Sbjct: 158 YVHVRARRGEATDSHSLAERVRREKISSRMKLLQSLVPGCDKITGKALVLDEIISYVQFL 217
Query: 161 QRQVE 165
+ +V+
Sbjct: 218 KDRVQ 222
>gi|147818198|emb|CAN60403.1| hypothetical protein VITISV_034133 [Vitis vinifera]
Length = 484
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 73/126 (57%), Gaps = 22/126 (17%)
Query: 90 NTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 149
N+ E K +YIHVRARRGQAT+SHSLAER ITGKA M
Sbjct: 251 NSSNGEAPKENYIHVRARRGQATNSHSLAER----------------------ITGKAVM 288
Query: 150 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTH 209
LDEIINYVQSLQ+QVEFLSMKLA VNP L+ +++ L +K+ + +G M+
Sbjct: 289 LDEIINYVQSLQQQVEFLSMKLATVNPELNIDIERLLSKDILNSRGGSTSVLGFGPGMSS 348
Query: 210 PAAYLH 215
Y H
Sbjct: 349 SHPYPH 354
>gi|357500329|ref|XP_003620453.1| Transcription factor BEE [Medicago truncatula]
gi|355495468|gb|AES76671.1| Transcription factor BEE [Medicago truncatula]
Length = 263
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 76/120 (63%), Gaps = 18/120 (15%)
Query: 62 VSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERV 121
VS + K+S G K+ K+ + + KA EV +HVRARRGQATDSHSLAERV
Sbjct: 122 VSESGSKTKLSGGRG----KRVKSYETEEEKAKEV-----VHVRARRGQATDSHSLAERV 172
Query: 122 RREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 181
RR KI+E++K LQ++VPGC K G A MLDEIINY FLS+KL A + DFN
Sbjct: 173 RRGKINEKLKCLQNIVPGCYKTMGMAVMLDEIINY---------FLSLKLTAASTYYDFN 223
>gi|255572100|ref|XP_002526990.1| DNA binding protein, putative [Ricinus communis]
gi|223533625|gb|EEF35362.1| DNA binding protein, putative [Ricinus communis]
Length = 189
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 57/66 (86%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
+ IHVRA+RGQATDSHSLAERVRRE+I+E+++ LQDLVPGC K G A MLD IINYVQS
Sbjct: 117 EVIHVRAKRGQATDSHSLAERVRRERINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQS 176
Query: 160 LQRQVE 165
LQ Q+E
Sbjct: 177 LQNQIE 182
>gi|223948547|gb|ACN28357.1| unknown [Zea mays]
Length = 188
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 65/87 (74%), Gaps = 3/87 (3%)
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFA-- 187
MK LQDLVPGC+K+TGKA MLDEIINYVQSLQRQVEFLSMKL+ VNPRL+ D+ F
Sbjct: 1 MKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPRLELGADDSFVPR 60
Query: 188 KEAFPVCPSNFPTIGMSSE-MTHPAAY 213
+A +C + +I M+ + + PAAY
Sbjct: 61 DDANKMCAAATSSISMAQQPLPLPAAY 87
>gi|225456606|ref|XP_002267823.1| PREDICTED: transcription factor bHLH79 isoform 2 [Vitis vinifera]
Length = 262
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 65/105 (61%), Gaps = 28/105 (26%)
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
+ +K +E K DYIHVRARRGQATDSHSLAERV GKA
Sbjct: 142 EESKPAEQSKQDYIHVRARRGQATDSHSLAERV----------------------IGKAL 179
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPV 193
+LDEIINY+QSLQRQVEFLSMKL AVN R++ V E FP+
Sbjct: 180 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNHTV------EGFPL 218
>gi|147797633|emb|CAN71939.1| hypothetical protein VITISV_038910 [Vitis vinifera]
Length = 381
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 80/149 (53%), Gaps = 37/149 (24%)
Query: 74 AVGRESFKKRKADK--VQN-------------TKASEVQKHDYIHVRARRGQATDSHSLA 118
+GR+ +K+KA++ V N ++ E K DYIHVRA+RGQAT+SHSLA
Sbjct: 201 CLGRQDERKQKAEQKIVANNCGKLIGEEVKMSSQTGEAPKEDYIHVRAKRGQATNSHSLA 260
Query: 119 ERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
ER ITGKA MLDEIINYVQSLQRQVEFLSMKLA V P +
Sbjct: 261 ER----------------------ITGKAVMLDEIINYVQSLQRQVEFLSMKLATVYPEM 298
Query: 179 DFNVDNLFAKEAFPVCPSNFPTIGMSSEM 207
+ ++ + + + P +G M
Sbjct: 299 NVQIERILSSDIHHSKGGTAPILGFGPGM 327
>gi|414886198|tpg|DAA62212.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 172
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 65/97 (67%), Gaps = 7/97 (7%)
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFAK 188
MK+LQDLVPGCNK+ GKA MLDEIINYVQSLQ+QVEFLSMKLA VNP+LDF N+ L K
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHK 60
Query: 189 EAFPVCP----SNFP--TIGMSSEMTHPAAYLHQFNS 219
+ + C S FP + G + A H F S
Sbjct: 61 DMYQPCGPSANSVFPLESDGAAFPFCDQADLFHSFGS 97
>gi|414886200|tpg|DAA62214.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 161
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 65/97 (67%), Gaps = 7/97 (7%)
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFAK 188
MK+LQDLVPGCNK+ GKA MLDEIINYVQSLQ+QVEFLSMKLA VNP+LDF N+ L K
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHK 60
Query: 189 EAFPVCP----SNFP--TIGMSSEMTHPAAYLHQFNS 219
+ + C S FP + G + A H F S
Sbjct: 61 DMYQPCGPSANSVFPLESDGAAFPFCDQADLFHSFGS 97
>gi|414886199|tpg|DAA62213.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 162
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 65/97 (67%), Gaps = 7/97 (7%)
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFAK 188
MK+LQDLVPGCNK+ GKA MLDEIINYVQSLQ+QVEFLSMKLA VNP+LDF N+ L K
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHK 60
Query: 189 EAFPVCP----SNFP--TIGMSSEMTHPAAYLHQFNS 219
+ + C S FP + G + A H F S
Sbjct: 61 DMYQPCGPSANSVFPLESDGAAFPFCDQADLFHSFGS 97
>gi|116309555|emb|CAH66617.1| OSIGBa0144C23.3 [Oryza sativa Indica Group]
Length = 157
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 58/75 (77%), Gaps = 4/75 (5%)
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
MK LQ LVPGCNKITGKA MLDEIINYVQSLQRQVEFLSMKLA +NP+LDF+ + +K+
Sbjct: 1 MKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKD 60
Query: 190 A----FPVCPSNFPT 200
P PS+ PT
Sbjct: 61 MSHMPVPAYPSSDPT 75
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 5/81 (6%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII YV+ LQ
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQL 156
Query: 163 QVEFLSMK----LAAVNPRLD 179
QV+ LSM AV PRL+
Sbjct: 157 QVKVLSMSRLGGAGAVGPRLN 177
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 71/112 (63%), Gaps = 6/112 (5%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 30 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNK-TDKASMLDEIIDYVKFLQL 88
Query: 163 QVEFLSMKL-----AAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTH 209
QV+ LSM A VN N FA A SN G++S +T
Sbjct: 89 QVKVLSMSRLGGAGALVNSDPPAEGGNNFAASAGSSGVSNPAQDGLASALTE 140
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 61/81 (75%), Gaps = 5/81 (6%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII YV+ LQ
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQL 156
Query: 163 QVEFLSMK----LAAVNPRLD 179
QV+ LSM +V PRL+
Sbjct: 157 QVKVLSMSRLGGAGSVGPRLN 177
>gi|125564328|gb|EAZ09708.1| hypothetical protein OsI_31996 [Oryza sativa Indica Group]
Length = 236
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 65/83 (78%), Gaps = 4/83 (4%)
Query: 105 RARRGQATDSHSL---AERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 161
+ R+ + D+ SL +VRRE+ISERM+ LQ LVPGC+K+TGKA +LDEIINYVQSLQ
Sbjct: 59 KKRKPREEDTASLNSAHSKVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQ 118
Query: 162 RQVEFLSMKLAAVNPRL-DFNVD 183
QVEFLSM++A+++P L F +D
Sbjct: 119 NQVEFLSMRIASLSPVLYGFGID 141
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Query: 76 GRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
G ++ + +A T + Q VRARRGQATD HS+AER+RRE+I+ERMK LQ+
Sbjct: 102 GGQTQTQSQATASATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQE 161
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 162 LVPNGNK-TDKASMLDEIIDYVKFLQLQVKVLSM 194
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Query: 76 GRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
G ++ + +A T + Q VRARRGQATD HS+AER+RRE+I+ERMK LQ+
Sbjct: 102 GGQTQTQSQATASATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQE 161
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 162 LVPNGNK-TDKASMLDEIIDYVKFLQLQVKVLSM 194
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RREKIS+RMK LQDLVP NK KA MLDEII+YV+ LQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 340
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 341 VKVLSM 346
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RREKIS+RMK LQDLVP NK KA MLDEII+YV+ LQ Q
Sbjct: 317 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 375
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 376 VKVLSM 381
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RREKIS+RMK LQDLVP NK KA MLDEII+YV+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 378
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 67/103 (65%), Gaps = 14/103 (13%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
VRARRGQATD HS+AER+RRE+I+ERMK LQDLVP NK T KA MLDEI++YV+ LQ
Sbjct: 3 RVRARRGQATDPHSIAERLRRERIAERMKALQDLVPNANK-TDKASMLDEIVDYVKFLQL 61
Query: 163 QVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSS 205
QV+ LSM L + A P ++ P+ G +S
Sbjct: 62 QVKVLSMS-------------RLGSAAAVPSLVADLPSEGANS 91
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 90/171 (52%), Gaps = 22/171 (12%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII YV+ LQ Q
Sbjct: 30 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIGYVKFLQLQ 88
Query: 164 VEFLSMK----LAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFNS 219
V+ LSM AAV P L A + V N T+ S+ T HQ
Sbjct: 89 VKVLSMSRLGGAAAVAP--------LVADISSEVRNGNNGTVTASTNDTLTVTE-HQVVK 139
Query: 220 LQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSN 270
L ++ D+G G + P+S ++C+P + P N
Sbjct: 140 LMEE-------DMGSAMQYLQG-KGLCLMPISLASAISTATCHPRVNPXHN 182
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RREKIS+RMK LQDLVP NK KA MLDEII+YV+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 378
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RARRGQATD HS+AER+RREKISERMK LQDLVP NK KA MLDEII+YV+ LQ Q
Sbjct: 315 TRARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 373
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 374 VKVLSM 379
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RREKIS+RMK LQDLVP NK KA MLDEII+YV+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDYVKFLQLQ 378
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 136 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 194
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 195 VKVLSM 200
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Query: 76 GRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
G ++ + +A T + Q VRARRGQATD HS+AER+RRE+I+ERMK LQ+
Sbjct: 159 GGQTQTQSQATASATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQE 218
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 219 LVPNGNK-TDKASMLDEIIDYVKFLQLQVKVLSM 251
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 174 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 232
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 233 VKVLSM 238
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Query: 102 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 161
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 181 TRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQ 239
Query: 162 RQVEFLSM 169
QV+ LSM
Sbjct: 240 LQVKVLSM 247
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 60/77 (77%), Gaps = 5/77 (6%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 37 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 95
Query: 164 VEFLSMK----LAAVNP 176
V+ LSM AAV P
Sbjct: 96 VKVLSMSRLGGAAAVAP 112
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 225 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 283
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 284 VKVLSM 289
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 31 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNK-TDKASMLDEIIDYVKFLQL 89
Query: 163 QVEFLSM 169
QV+ LSM
Sbjct: 90 QVKVLSM 96
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 253 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 311
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 312 VKVLSM 317
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 199 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQVQ 257
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 258 VKVLSM 263
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 196 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQVQ 254
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 255 VKVLSM 260
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 197 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 255
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 256 VKVLSM 261
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 60/77 (77%), Gaps = 5/77 (6%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 247 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 305
Query: 164 VEFLSMK----LAAVNP 176
V+ LSM AAV P
Sbjct: 306 VKVLSMSRLGGAAAVAP 322
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 138 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQLQ 196
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 197 VKVLSM 202
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 204 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 262
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 263 VKVLSM 268
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RREKIS+RMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQLQ 372
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 373 VKVLSM 378
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RREKIS+RMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQLQ 372
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 373 VKVLSM 378
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP CNK T +A MLDEI++YV+ L+ Q
Sbjct: 58 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQ 116
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 117 VKVLSM 122
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 73/110 (66%), Gaps = 6/110 (5%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 104 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 162
Query: 164 VEFLSMK----LAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTH 209
V+ LSM AAV P L ++ + + ++ PT G ++ T
Sbjct: 163 VKVLSMSRLGGAAAVAP-LVADMSSEGGGDCIQASGTSGPTGGRATNGTQ 211
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/74 (67%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Query: 96 VQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIIN 155
VQ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+
Sbjct: 120 VQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIID 178
Query: 156 YVQSLQRQVEFLSM 169
YV+ LQ QV+ LSM
Sbjct: 179 YVKFLQLQVKVLSM 192
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RARRGQATD HS+AER+RREKISERMK LQDLVP NK K+ MLDEII+YV+ LQ QV
Sbjct: 321 RARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNK-ADKSSMLDEIIDYVKFLQLQV 379
Query: 165 EFLSM 169
+ LSM
Sbjct: 380 KVLSM 384
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+ISER+K LQ+LVP CNK T +A MLDEI++YV+ L+ Q
Sbjct: 142 VRARRGQATDPHSIAERLRRERISERIKALQELVPSCNK-TDRAAMLDEILDYVKFLRLQ 200
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 201 VKVLSM 206
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 138 IRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVEFLQLQ 196
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 197 VKVLSM 202
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 256 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 314
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 315 VKVLSM 320
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 138 IRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQLQ 196
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 197 VKVLSM 202
>gi|293336149|ref|NP_001169231.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975699|gb|ACN32037.1| unknown [Zea mays]
gi|414885895|tpg|DAA61909.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 332
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 48/52 (92%)
Query: 92 KASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI 143
+ SE QK DYIHVRARRGQAT+SHSLAER+RREKISERMK LQDLVPGC+K+
Sbjct: 241 ETSESQKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKV 292
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 138 IRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQLQ 196
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 197 VKVLSM 202
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+ISER+K LQ+LVP CNK T +A MLDEI++YV+ L+ Q
Sbjct: 141 VRARRGQATDPHSIAERLRRERISERIKALQELVPSCNK-TDRAAMLDEILDYVKFLRLQ 199
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 200 VKVLSM 205
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 60/77 (77%), Gaps = 5/77 (6%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEI++YV+ LQ Q
Sbjct: 240 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIVDYVKFLQLQ 298
Query: 164 VEFLSMK----LAAVNP 176
V+ LSM AAV P
Sbjct: 299 VKVLSMSRLGGAAAVAP 315
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 60/77 (77%), Gaps = 5/77 (6%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEI++YV+ LQ Q
Sbjct: 239 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIVDYVKFLQLQ 297
Query: 164 VEFLSMK----LAAVNP 176
V+ LSM AAV P
Sbjct: 298 VKVLSMSRLGGAAAVAP 314
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 204 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQLQ 262
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 263 VKVLSM 268
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 204 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQLQ 262
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 263 VKVLSM 268
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII YV+ LQ Q
Sbjct: 296 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIEYVKFLQLQ 354
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 355 VKVLSM 360
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RREKIS+RMK LQDLVP NK KA MLDEII++V+ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNK-ADKASMLDEIIDHVKFLQLQ 378
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK T KA MLDEII YV+ LQ Q
Sbjct: 149 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIEYVKFLQLQ 207
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 208 VKVLSM 213
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP CNK T +A MLDEI++YV+ L+ Q
Sbjct: 157 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNK-TDRAAMLDEIVDYVKFLRLQ 215
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 216 VKVLSM 221
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDKASMLDEIIDYVKFLQVQ 202
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 203 VKVLSM 208
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 217 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 275
Query: 164 VEFLSM 169
V+ LS+
Sbjct: 276 VKVLSV 281
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
VRARRGQATD HS+AER+RREKIS+RMK LQ+LVP N+ T KA MLDEII YV+ LQ
Sbjct: 297 RVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNR-TDKASMLDEIIEYVKFLQL 355
Query: 163 QVEFLSM 169
QV+ LSM
Sbjct: 356 QVKVLSM 362
>gi|413951547|gb|AFW84196.1| putative HLH DNA-binding domain superfamily protein, partial [Zea
mays]
Length = 236
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/51 (86%), Positives = 47/51 (92%)
Query: 131 KYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN 181
+ LQDLVPGCNK+ GKA MLDEIINYVQSLQRQVEFLSMKLA VNP+LDFN
Sbjct: 119 RSLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 169
>gi|118485745|gb|ABK94722.1| unknown [Populus trichocarpa]
Length = 77
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 54/75 (72%), Gaps = 7/75 (9%)
Query: 235 INPSEMGLRRTISAPVSAPETFIDSSCYPHLQPSSNWDSDLQNFYNVA-------SFPSQ 287
INP +MGLRRT S PVS PETF+DSSC+ +Q WD+DL N YNVA +FP Q
Sbjct: 3 INPPDMGLRRTTSTPVSIPETFLDSSCFTQIQAPPTWDADLPNLYNVAFDQGRQTTFPVQ 62
Query: 288 QFTGTLEASNLKMEM 302
F+G++EASNLKMEM
Sbjct: 63 PFSGSVEASNLKMEM 77
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RARRGQATD HS+AER+RREKISERMK LQDLVP NK K+ MLDEII+YV+ LQ Q
Sbjct: 319 ARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNK-ADKSSMLDEIIDYVKFLQLQ 377
Query: 164 VEFLSM 169
V+ L M
Sbjct: 378 VKVLCM 383
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 59/77 (76%), Gaps = 5/77 (6%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQAT HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 260 VRARRGQATHPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 318
Query: 164 VEFLSMK----LAAVNP 176
V+ LSM AAV P
Sbjct: 319 VKVLSMSRLGGAAAVAP 335
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/65 (72%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RARRGQATD HS+AER+RREKISERMK LQ+LVP NK K+ MLDEII+YV+ LQ QV
Sbjct: 322 RARRGQATDPHSIAERLRREKISERMKNLQELVPNSNK-ADKSSMLDEIIDYVKFLQLQV 380
Query: 165 EFLSM 169
+ LSM
Sbjct: 381 KVLSM 385
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RARRGQATD HS+AER+RREKISERMK LQ LVP NK KA MLDEII+YV+ LQ Q
Sbjct: 316 TRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQLQ 374
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 375 VKVLSM 380
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RARRGQATD HS+AER+RREKISERMK LQ LVP NK KA MLDEII+YV+ LQ Q
Sbjct: 316 TRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQLQ 374
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 375 VKVLSM 380
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RARRGQATD HS+AER+RREKISERMK LQ LVP NK KA MLDEII+YV+ LQ Q
Sbjct: 316 TRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQLQ 374
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 375 VKVLSM 380
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
VRARRG ATD HS+AER+RREKI+ERMK LQ+LVP NK+ KA MLDEII YV+ LQ
Sbjct: 239 RVRARRGHATDPHSIAERLRREKIAERMKNLQELVPNSNKVD-KASMLDEIIEYVKFLQL 297
Query: 163 QVEFLSM 169
QV+ LSM
Sbjct: 298 QVKVLSM 304
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RARRGQATD HS+AER+RREKISERMK LQ LVP NK KA MLDEII+YV+ LQ Q
Sbjct: 239 TRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQLQ 297
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 298 VKVLSM 303
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERM+ LQDLVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 181 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNK-TDRAAMLDEILDYVKFLRLQ 239
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 240 VKVLSM 245
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+ISER+K LQ+LVP CNK T +A ++DEI++YV+ L+ Q
Sbjct: 134 VRARRGQATDPHSIAERLRRERISERIKALQELVPNCNK-TDRAALVDEILDYVKFLRLQ 192
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 193 VKVLSM 198
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP +K+ KA MLDEII YV+ LQ
Sbjct: 350 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSSKVD-KASMLDEIIEYVKFLQL 408
Query: 163 QVEFLSM 169
QV+ LSM
Sbjct: 409 QVKVLSM 415
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERM+ LQDLVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 132 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNK-TDRAAMLDEILDYVKFLRLQ 190
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 191 VKVLSM 196
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 169 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDRAAMLDEIVDYVKFLRLQ 227
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 228 VKVLSM 233
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 151 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNK-TDRAAMLDEIVDYVKFLRLQ 209
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 210 VKVLSM 215
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
VRARRGQATD HS+AER+RR +I+ER+K LQ+LVP CNK T +A MLDEI++YV+ L+
Sbjct: 19 RVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNK-TDRAAMLDEIVDYVKFLRL 77
Query: 163 QVEFLSM 169
QV+ LSM
Sbjct: 78 QVKVLSM 84
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RA+RGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV
Sbjct: 195 RAKRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVRFLQLQV 253
Query: 165 EFLSM 169
+ LSM
Sbjct: 254 KVLSM 258
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 99 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDRAAMLDEIVDYVKFLRLQ 157
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 158 VKVLSM 163
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RA+RGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV
Sbjct: 189 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 247
Query: 165 EFLSM 169
+ LSM
Sbjct: 248 KVLSM 252
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 166 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSINK-TDRAAMLDEIVDYVKFLRLQ 224
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 225 VKVLSM 230
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 175 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNK-TDRAAMLDEIVDYVKFLRLQ 233
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 234 VKVLSM 239
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 54/64 (84%), Gaps = 2/64 (3%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI--TGKAGMLDEIINYVQSLQ 161
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK+ T KA MLDEII+YV+ LQ
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQ 309
Query: 162 RQVE 165
QV+
Sbjct: 310 LQVK 313
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RA+RGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV
Sbjct: 196 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 254
Query: 165 EFLSM 169
+ LSM
Sbjct: 255 KVLSM 259
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 169 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSINK-TDRAAMLDEIVDYVKFLRLQ 227
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 228 VKVLSM 233
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 115 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 173
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 174 VKVLSM 179
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 116 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 174
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 175 VKVLSM 180
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RREKIS+RMK LQ+LVP NK T KA ML+EII Y++ LQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNK-TDKASMLEEIIEYIKFLQLQ 340
Query: 164 VEFLSM-KLAAVNPRLDFNVDN 184
+ LSM +L A + + +D+
Sbjct: 341 TKVLSMSRLGATDALVPLLMDS 362
>gi|326521778|dbj|BAK00465.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 173
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 49/63 (77%), Gaps = 6/63 (9%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
K D+IHVRARRGQATDSHSLAER RREKI+ERMK LQDLVPGCNK ++ + Y
Sbjct: 114 KQDFIHVRARRGQATDSHSLAERARREKITERMKILQDLVPGCNK------LMRPWLGYW 167
Query: 158 QSL 160
QS+
Sbjct: 168 QSI 170
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
VRARRGQATD HS+AER+RR +I+ER+K LQ+LVP CNK T +A MLDEI++YV+ L+
Sbjct: 15 RVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNK-TDRAAMLDEIVDYVKFLRL 73
Query: 163 QVEFLSM 169
Q++ LSM
Sbjct: 74 QIKVLSM 80
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 163 VRARRGQATDPHSIAERLRRERIAERMKALQELVPTANK-TDRAAMIDEIVDYVKFLRLQ 221
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 222 VKVLSM 227
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 159 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 217
Query: 164 VE 165
V+
Sbjct: 218 VK 219
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 124 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 182
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 183 VKVLSM 188
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ Q
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 308
Query: 164 VEFLS 168
V +S
Sbjct: 309 VLSMS 313
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 24 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 82
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 83 VKVLSM 88
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 133 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 191
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 192 VKVLSM 197
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 133 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 191
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 192 VKVLSM 197
>gi|51090923|dbj|BAD35528.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|51090957|dbj|BAD35560.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|215678579|dbj|BAG92234.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 154
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 66/95 (69%), Gaps = 3/95 (3%)
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFAK 188
M+ L++LVPGC+K++G A +LDEIIN+VQSLQRQVE+LSM+LAAVNPR+DF +DN
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDNFLTT 60
Query: 189 EAFPVCPSNFPTIGMSSE-MTHPAAYLHQFNSLQQ 222
E + N+ GM E +T P +H +L Q
Sbjct: 61 ECGRITGLNYKN-GMDLEQVTWPDMGVHGARNLMQ 94
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK + +A MLDEI++YV+ L+ Q
Sbjct: 180 VRARRGQATDPHSIAERLRRERIAERMRALQELVPSINK-SDRAAMLDEIVDYVKFLRLQ 238
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 239 VKVLSM 244
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 122 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAVMLDEILDYVKFLRLQ 180
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 181 VKVLSM 186
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 52/65 (80%), Gaps = 5/65 (7%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI-----TGKAGMLDEIINYVQ 158
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK+ T KA MLDEII+YV+
Sbjct: 285 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKASMLDEIIDYVK 344
Query: 159 SLQRQ 163
LQ Q
Sbjct: 345 FLQLQ 349
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI++YV+ L+ QV
Sbjct: 127 RARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQV 185
Query: 165 EFLSM 169
+ LSM
Sbjct: 186 KVLSM 190
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 53/64 (82%), Gaps = 2/64 (3%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI--TGKAGMLDEIINYVQSLQ 161
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ
Sbjct: 238 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQ 297
Query: 162 RQVE 165
QV+
Sbjct: 298 LQVK 301
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 133 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRLQ 191
Query: 164 VEFLSM 169
V+ LS+
Sbjct: 192 VKVLSI 197
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
VRARRGQATD HS+AER+RREKIS+RMK LQ+LVP N+ T KA MLDEII YV+ LQ
Sbjct: 297 RVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNR-TDKASMLDEIIEYVKFLQL 355
Query: 163 QVEFLS 168
QV+ S
Sbjct: 356 QVKVRS 361
>gi|388509910|gb|AFK43021.1| unknown [Medicago truncatula]
Length = 102
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 59/91 (64%), Gaps = 11/91 (12%)
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVD----NL 185
MK LQDLVPGCNK+ GKA +LDEIINY+QSLQRQVEFLSMKL AVN RL+ ++
Sbjct: 1 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTGIEASPPKD 60
Query: 186 FAKEAFPVCPSNF-------PTIGMSSEMTH 209
+ ++ F + F P+ G S E H
Sbjct: 61 YGQQTFDLAGMPFVSQATREPSRGFSPEWLH 91
>gi|226493556|ref|NP_001141213.1| uncharacterized protein LOC100273300 [Zea mays]
gi|194703300|gb|ACF85734.1| unknown [Zea mays]
gi|223946721|gb|ACN27444.1| unknown [Zea mays]
Length = 154
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 65/98 (66%), Gaps = 4/98 (4%)
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFAK 188
M+ L++LVPGC+K++G A +LDEIIN+VQSLQRQVE+LSM+LAAVNPR+DF +D+
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDSFLTT 60
Query: 189 EAFPVCPSNFPTIGMSSEMTHPAAYLH---QFNSLQQQ 223
E + N ++T P +H Q LQQQ
Sbjct: 61 ECGRIAGFNCKNGIDLEQVTWPEMGVHGARQLMQLQQQ 98
>gi|326505424|dbj|BAJ95383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 199
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 45/47 (95%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIT 144
K +Y+H+RA+RGQAT+SHSLAER+RR+KISERMK LQDLVPGCNK+T
Sbjct: 132 KENYVHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKVT 178
>gi|414865639|tpg|DAA44196.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 201
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 61/87 (70%), Gaps = 3/87 (3%)
Query: 62 VSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERV 121
V V L + ++A+ RE + +K + +A ++ DY+HVRA+RGQAT+SHSLAER
Sbjct: 115 VHVNVLLQGETSALQREVSMECADEKAGDARA---KREDYVHVRAKRGQATNSHSLAERF 171
Query: 122 RREKISERMKYLQDLVPGCNKITGKAG 148
RREKI+ERMK LQDLVPGCNK + G
Sbjct: 172 RREKINERMKLLQDLVPGCNKADYRQG 198
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LV NK T KA MLDEII+YV+ LQ Q
Sbjct: 145 VRARRGQATDPHSIAERLRRERIAERMKALQELVSNANK-TDKASMLDEIIDYVKFLQLQ 203
Query: 164 VEFLSMKLAAVNPR 177
V +S A R
Sbjct: 204 VLSMSRLGGAARSR 217
>gi|307136009|gb|ADN33865.1| bHLH transcription factor [Cucumis melo subsp. melo]
Length = 135
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 48/55 (87%), Gaps = 1/55 (1%)
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNVD 183
MK LQ LVPGC+K+TGKA MLDEIINYVQSLQ QVEFLSMKLA+++P L DF +D
Sbjct: 1 MKVLQTLVPGCHKVTGKASMLDEIINYVQSLQNQVEFLSMKLASLHPVLYDFGMD 55
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LV NK T KA MLDEII+YV+ LQ
Sbjct: 116 RVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANK-TDKASMLDEIIDYVKFLQL 174
Query: 163 QVEFLSMKLAAVNPR 177
QV +S A R
Sbjct: 175 QVLSMSRLGGAARSR 189
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 55/72 (76%), Gaps = 5/72 (6%)
Query: 109 GQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
GQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LS
Sbjct: 169 GQATDPHSIAERLRRERIAERMKALQELVPSANK-TDKASMLDEIIDYVKFLQLQVKVLS 227
Query: 169 MK----LAAVNP 176
M AAV P
Sbjct: 228 MSRLGGAAAVGP 239
>gi|449440508|ref|XP_004138026.1| PREDICTED: uncharacterized protein LOC101208544 [Cucumis sativus]
gi|449501436|ref|XP_004161366.1| PREDICTED: uncharacterized LOC101208544 [Cucumis sativus]
Length = 135
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 48/55 (87%), Gaps = 1/55 (1%)
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNVD 183
MK LQ LVPGC+K+TGKA MLDEIINYVQSLQ QVEFLSMKLA+++P L DF +D
Sbjct: 1 MKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPVLHDFGMD 55
>gi|242096368|ref|XP_002438674.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
gi|241916897|gb|EER90041.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
Length = 154
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 64/98 (65%), Gaps = 4/98 (4%)
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-NVDNLFAK 188
M+ L++LVPGC+K++G A +LDEIIN+VQSLQRQVE+LSM+LAAVNPR+DF +D+
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDSFLTT 60
Query: 189 EAFPVCPSNFPTIGMSSEMTHPAAYLH---QFNSLQQQ 223
E + N ++T P +H Q LQQ
Sbjct: 61 ECGRIAGFNCKNGIDLEQVTWPEMGVHGTRQLMQLQQH 98
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 109 GQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
GQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLS 322
Query: 169 M 169
M
Sbjct: 323 M 323
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 109 GQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
GQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLS 322
Query: 169 M 169
M
Sbjct: 323 M 323
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 57/76 (75%), Gaps = 7/76 (9%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RA RGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV
Sbjct: 240 RAWRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 298
Query: 165 EFLSMK----LAAVNP 176
LSM AAV P
Sbjct: 299 --LSMSRLGGAAAVAP 312
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 50/67 (74%)
Query: 102 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 161
+ RA+RG AT S+AERVRR KISERMK LQDLVP +K T + MLDE + YV+SLQ
Sbjct: 381 MRTRAKRGCATHPRSIAERVRRTKISERMKKLQDLVPSMDKQTNTSDMLDETVEYVKSLQ 440
Query: 162 RQVEFLS 168
RQV+ LS
Sbjct: 441 RQVQELS 447
>gi|297820582|ref|XP_002878174.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324012|gb|EFH54433.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 439
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 45/56 (80%)
Query: 95 EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGML 150
E +K Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ+LVPGC+K T G +
Sbjct: 195 ENEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKI 250
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 47/74 (63%)
Query: 143 ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIG 202
I G A +LDEIIN+VQSLQRQVE LSM+LAAVNPR+DFN+D + A E + +F
Sbjct: 303 IQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASENGSLMDGSFNGTP 362
Query: 203 MSSEMTHPAAYLHQ 216
M H A Q
Sbjct: 363 MQLAWPHQAIETEQ 376
>gi|168027605|ref|XP_001766320.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682534|gb|EDQ68952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 120
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 53/73 (72%)
Query: 102 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 161
+ RA+RG AT S+AERVRR KISERMK LQDLVP +K T + MLDE + YV+SLQ
Sbjct: 30 MRTRAKRGCATHPRSIAERVRRTKISERMKRLQDLVPNMDKQTNTSDMLDETVEYVKSLQ 89
Query: 162 RQVEFLSMKLAAV 174
R+V+ LS +A +
Sbjct: 90 RKVQELSDTVARL 102
>gi|79324891|ref|NP_001031530.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|330255009|gb|AEC10103.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 233
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 42/49 (85%)
Query: 95 EVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI 143
E K Y+HVRARRGQATD+HSLAER RREKI+ RMK LQ+LVPGC+K+
Sbjct: 176 ESDKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKV 224
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 6/125 (4%)
Query: 50 AVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVR---- 105
A+ A+++ G S ++ +KRK + T +E + + R
Sbjct: 219 AMTAPAIEITGTSSSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTT 278
Query: 106 -ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK + KA MLDE I Y++SLQ Q+
Sbjct: 279 STKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQI 337
Query: 165 EFLSM 169
+ +SM
Sbjct: 338 QMMSM 342
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 6/125 (4%)
Query: 50 AVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVR---- 105
A+ A+++ G S ++ +KRK + T +E + + R
Sbjct: 148 AMTAPAIEITGTSSSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTT 207
Query: 106 -ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK + KA MLDE I Y++SLQ Q+
Sbjct: 208 STKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQI 266
Query: 165 EFLSM 169
+ +SM
Sbjct: 267 QMMSM 271
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 6/125 (4%)
Query: 50 AVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVR---- 105
A+ A+++ G S ++ +KRK + T +E + + R
Sbjct: 148 AMTAPAIEITGTSSSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTT 207
Query: 106 -ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK + KA MLDE I Y++SLQ Q+
Sbjct: 208 STKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQI 266
Query: 165 EFLSM 169
+ +SM
Sbjct: 267 QMMSM 271
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 6/125 (4%)
Query: 50 AVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVR---- 105
A+ A+++ G S ++ +KRK + T +E + + R
Sbjct: 219 AMTAPAIEITGTSSSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTT 278
Query: 106 -ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK + KA MLDE I Y++SLQ Q+
Sbjct: 279 STKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQI 337
Query: 165 EFLSM 169
+ +SM
Sbjct: 338 QMMSM 342
>gi|255637743|gb|ACU19194.1| unknown [Glycine max]
Length = 156
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNVD 183
MK LQ LVPGC+K+TGKA +LDEIINYVQSLQ QVEFLSMKLA VNP D +D
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLALVNPMFYDLAID 55
>gi|356527670|ref|XP_003532431.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 156
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNVD 183
MK LQ LVPGC+K+TGKA +LDEIINYVQSLQ QVEFLSMKLA VNP D +D
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLALVNPMFYDLAID 55
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISERM+ LQDLVP +K T + MLD ++Y++ LQRQ
Sbjct: 339 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 398
Query: 164 VEFLS 168
VE LS
Sbjct: 399 VETLS 403
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR KISERM+ LQDLVP +K T A MLD ++Y++ LQ+Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 392
Query: 164 VEFLS 168
V+ LS
Sbjct: 393 VQTLS 397
>gi|168056355|ref|XP_001780186.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668419|gb|EDQ55027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 51/71 (71%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA RG AT S+AERVRR KISERMK LQDLVP ++ T A MLD+ + YV+ LQ+Q
Sbjct: 63 IRANRGHATHPRSIAERVRRGKISERMKKLQDLVPSMDRQTNTADMLDDAVEYVKQLQQQ 122
Query: 164 VEFLSMKLAAV 174
V+ LS +A +
Sbjct: 123 VQELSKTVAEL 133
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 68/111 (61%), Gaps = 11/111 (9%)
Query: 78 ESFKKRKADKVQNTKASEVQKHDYIHVR----------ARRGQATDSHSLAERVRREKIS 127
E+ K++ D ++ SE + + + + ++RG+A + H+L+ER RR++I+
Sbjct: 279 ENLKRKHRDTEESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRIN 338
Query: 128 ERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+ +SM P +
Sbjct: 339 EKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSMGAGMYMPSM 388
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 49/59 (83%), Gaps = 1/59 (1%)
Query: 111 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
ATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 220 ATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 277
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 68/111 (61%), Gaps = 11/111 (9%)
Query: 78 ESFKKRKADKVQNTKASEVQKHDYIHVR----------ARRGQATDSHSLAERVRREKIS 127
E+ K++ D ++ SE + + + + ++RG+A + H+L+ER RR++I+
Sbjct: 279 ENLKRKHRDTEESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRIN 338
Query: 128 ERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+ +SM P +
Sbjct: 339 EKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSMGAGMYMPSM 388
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 68/111 (61%), Gaps = 11/111 (9%)
Query: 78 ESFKKRKADKVQNTKASEVQKHDYIHVR----------ARRGQATDSHSLAERVRREKIS 127
E+ K++ D ++ SE + + + + ++RG+A + H+L+ER RR++I+
Sbjct: 279 ENLKRKHRDTEESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRIN 338
Query: 128 ERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+ +SM P +
Sbjct: 339 EKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSMGAGMYMPSM 388
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 68/111 (61%), Gaps = 11/111 (9%)
Query: 78 ESFKKRKADKVQNTKASEVQKHDYIHVR----------ARRGQATDSHSLAERVRREKIS 127
E+ K++ D ++ SE + + + + ++RG+A + H+L+ER RR++I+
Sbjct: 279 ENLKRKHRDTEESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRIN 338
Query: 128 ERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+ +SM P +
Sbjct: 339 EKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSMGAGMYMPSM 388
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 68/111 (61%), Gaps = 11/111 (9%)
Query: 78 ESFKKRKADKVQNTKASEVQKHDYIHVR----------ARRGQATDSHSLAERVRREKIS 127
E+ K++ D ++ SE + + + + ++RG+A + H+L+ER RR++I+
Sbjct: 279 ENLKRKHRDTEESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRIN 338
Query: 128 ERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+ +SM P +
Sbjct: 339 EKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSMGAGIYMPSM 388
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 47/65 (72%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR KISERM+ LQDLVP +K T A MLD + Y++ LQ Q
Sbjct: 337 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 396
Query: 164 VEFLS 168
VE LS
Sbjct: 397 VEALS 401
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR KISERM+ LQDLVP +K T A MLD ++Y++ LQ+Q
Sbjct: 330 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 389
Query: 164 VEFLS 168
V+ LS
Sbjct: 390 VQTLS 394
>gi|195643094|gb|ACG41015.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 151
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 48/56 (85%), Gaps = 1/56 (1%)
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNVDN 184
M+ LQ LVPGC+K+TGKA +LDEIINYVQSLQ QVEFLSM++A+++P L F +D+
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGLDS 56
>gi|357444375|ref|XP_003592465.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355481513|gb|AES62716.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 433
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR KISERM+ LQDLVP +K T + MLD + Y++ LQ Q
Sbjct: 355 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQNQ 414
Query: 164 VEFLS 168
VE LS
Sbjct: 415 VETLS 419
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR KISERM+ LQDLVP +K T A MLD + Y++ LQ Q
Sbjct: 340 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 399
Query: 164 VEFLS 168
V+ LS
Sbjct: 400 VQTLS 404
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 70/118 (59%), Gaps = 10/118 (8%)
Query: 65 AALNEKVSAAVGRESFKKRKADKVQNTKA--------SEVQKHDYIHVRARRGQATDSHS 116
++ +E V A E +KRK + + + SE +K +R +A + H+
Sbjct: 256 SSCDEPVQVAAAEED-RKRKGREAEEWECQSEDVDFESEAKKQVCGSTSTKRSRAAEVHN 314
Query: 117 LAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAV 174
L+ER RR++I+E+MK LQ+L+P CNK + KA MLDE I+Y++SLQ QV+ +SM V
Sbjct: 315 LSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAISYLKSLQLQVQMMSMGCGMV 371
>gi|297728315|ref|NP_001176521.1| Os11g0442650 [Oryza sativa Japonica Group]
gi|255680061|dbj|BAH95249.1| Os11g0442650 [Oryza sativa Japonica Group]
Length = 461
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 43/76 (56%), Gaps = 32/76 (42%)
Query: 100 DYIHVRARRGQATDSHSLAER--------------------------------VRREKIS 127
DYIHVRARRGQATDSHSLAER VRREKIS
Sbjct: 274 DYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRREKIS 333
Query: 128 ERMKYLQDLVPGCNKI 143
ERMK LQDLVPGCNK+
Sbjct: 334 ERMKLLQDLVPGCNKV 349
>gi|115477539|ref|NP_001062365.1| Os08g0536800 [Oryza sativa Japonica Group]
gi|38175541|dbj|BAD01234.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|45736094|dbj|BAD13119.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|113624334|dbj|BAF24279.1| Os08g0536800 [Oryza sativa Japonica Group]
Length = 143
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 48/56 (85%), Gaps = 1/56 (1%)
Query: 130 MKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNVDN 184
M+ LQ LVPGC+K+TGKA +LDEIINYVQSLQ QVEFLSM++A+++P L F +D+
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGMDS 56
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 266 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 324
Query: 166 FLSMKLAAV 174
+SM + V
Sbjct: 325 MMSMGCSMV 333
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 77 RESFKKRKADKVQNTKASEVQKHDYIHV---------RARRGQATDSHSLAERVRREKIS 127
R S +KR D + SE + + + + ARR +A + H+L+ER RR++I+
Sbjct: 273 RSSKRKRGLDTEDSESPSEDAESESLALDRKPPQKLTTARRSRAAEVHNLSERRRRDRIN 332
Query: 128 ERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLA-AVNPRLDFNVDNLF 186
E+M+ LQ+L+P CNK T KA MLDE I Y+++LQ QV+ + M A P + F + +
Sbjct: 333 EKMRALQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQMMWMGGGMAAPPAVMFPGMHQY 391
Query: 187 AKEAFPVCPSNFPTIGMSSEMTHPAAYLH 215
+ P + P + + + P Y H
Sbjct: 392 LPQMGPASMARMPFMAPQQQGSLPEQYAH 420
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 304 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 362
Query: 166 FLSMKLAAV 174
+SM + V
Sbjct: 363 MMSMGCSMV 371
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 77/140 (55%), Gaps = 6/140 (4%)
Query: 34 GFEASYAISRTSSSPPAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKVQNT-- 91
G ++S ++R + P A+++ G S ++ KKRK +
Sbjct: 214 GTDSSAGLNRKGKAVAMTAP-AIEITGTSSSVVSKSEIEPEKTNFDDKKRKEREATTEEA 272
Query: 92 --KASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGM 149
++ E ++ +R +A + H+L+ER RR++I+ERMK LQ+L+P CNK + KA M
Sbjct: 273 ECRSEETKQARGSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASM 331
Query: 150 LDEIINYVQSLQRQVEFLSM 169
LDE I Y++SLQ Q++ +SM
Sbjct: 332 LDEAIEYMKSLQLQIQVMSM 351
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Query: 76 GRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
GRE + + + ++ E +K + +R +A + H+L+ER RR++I+E+MK LQ+
Sbjct: 229 GREHEESEFQSEDVDFESPEAKKQVHGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQE 288
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAV 174
L+P CNK + KA MLDE I Y++SLQ QV+ +SM V
Sbjct: 289 LIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGYGMV 326
>gi|223942973|gb|ACN25570.1| unknown [Zea mays]
gi|413951549|gb|AFW84198.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 156
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 149 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN-VDNLFAKEAF--PVCPSNFPTIGMSS 205
MLDEIINYVQSLQRQVEFLSMKLA VNP+LDFN + NL + P P +FP +
Sbjct: 1 MLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNSLPNLLLPKDIHQPCGPPHFPLETSGA 60
Query: 206 EMTHPAAYLHQFNSLQQQAVSCSGLDLGIINPSEMGLRRTISAPVSAPETFIDSSCYPHL 265
P YL Q + C G ++P + R P++ F++ +
Sbjct: 61 ----PLPYLSQPHHGSPLGC-CMDTQGGSMHPLDAAFCR----PMNPQHPFLNGASDAAS 111
Query: 266 QPSSNWDSDLQNFYN--------VASFPSQQFTGTLEASNLKMEM 302
Q + W DLQ+ + +A S + G+L+ ++KME+
Sbjct: 112 QVGTFWQDDLQSVVHMDIGQSQEIAPTSSNSYNGSLQTVHMKMEL 156
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 56/90 (62%)
Query: 79 SFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVP 138
S K +D K ++Q +RA+RG AT S+AERVRR +ISERM+ LQDLVP
Sbjct: 257 SLPKNVSDVASIEKLLQLQDAVPCRIRAKRGCATHPRSIAERVRRTRISERMRKLQDLVP 316
Query: 139 GCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
+K T A MLD ++Y++ LQ+Q + LS
Sbjct: 317 NMDKQTNTADMLDLAVDYIKELQKQFKTLS 346
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ QV+
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 387
Query: 166 FLSMKLAAV 174
+ M A +
Sbjct: 388 MMWMGSAGI 396
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ QV+
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 387
Query: 166 FLSMKLAAV 174
+ M A +
Sbjct: 388 MMWMGSAGI 396
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 50/71 (70%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA RG AT S+AERVRR KISERMK LQ+LVP ++ T A MLD+ + YV+ LQ Q
Sbjct: 379 LRANRGHATHPRSIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVEYVKQLQLQ 438
Query: 164 VEFLSMKLAAV 174
V+ L+ +A +
Sbjct: 439 VQELTNTVAEL 449
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
Query: 76 GRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
GR+ + + + +A + + RR +A + H+ +ER RR++I+E+MK LQ+
Sbjct: 109 GRDELDDSRCEDADDCEAVDETRTSRRPAGKRRARAAEVHNQSERRRRDRINEKMKALQE 168
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCP 195
LVP CNK + KA +LDE I Y++SLQ QV+ + M + P + L + A + P
Sbjct: 169 LVPHCNK-SDKASILDEAIEYLKSLQLQVQIMWMT-TGMAPMMFPGAHQLMPQMAMGLNP 226
Query: 196 SNFPTIGMSSEMTHPAAYLH 215
+ PT S++ A +++
Sbjct: 227 ACMPTAQSLSQLQRVAPFMN 246
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 68/112 (60%), Gaps = 11/112 (9%)
Query: 77 RESFKKRKADKVQNTKASEVQKHDYIHVR----------ARRGQATDSHSLAERVRREKI 126
+ + K++ D ++ SE + + + VR ++R +A + H+L+ER RR++I
Sbjct: 419 KHNLKRKCRDTEESECPSEDVEEESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRI 478
Query: 127 SERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+ +SM P +
Sbjct: 479 NEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSMGTGLCMPPM 529
>gi|224053374|ref|XP_002297788.1| predicted protein [Populus trichocarpa]
gi|222845046|gb|EEE82593.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA+RG AT S+AERVRR +ISERM+ LQDLVP +K T + MLD ++Y++ LQRQ
Sbjct: 32 TRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 91
Query: 164 VEFLS---MKLAAVN 175
V+ LS + A +N
Sbjct: 92 VQTLSEIRARCACIN 106
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 96 VQKHDYIH-VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 154
V+K D+ + ++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I
Sbjct: 440 VKKGDHARGMGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAI 498
Query: 155 NYVQSLQRQVEFLSM 169
Y+++LQ QV+ +SM
Sbjct: 499 EYLKTLQLQVQMMSM 513
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 68/112 (60%), Gaps = 11/112 (9%)
Query: 77 RESFKKRKADKVQNTKASEVQKHDYIHVR----------ARRGQATDSHSLAERVRREKI 126
+ + K++ D ++ SE + + + VR ++R +A + H+L+ER RR++I
Sbjct: 404 KHNLKRKCRDTEESECPSEDVEEESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRI 463
Query: 127 SERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+ +SM P +
Sbjct: 464 NEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSMGTGLCMPPM 514
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y+++LQ QV+
Sbjct: 32 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQ 90
Query: 166 FLSMKLA-AVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLH 215
+ M A P + F + + + P + P + + + P Y H
Sbjct: 91 MMWMGGGMAAPPAVMFPGMHQYLPQMGPASMARMPFMAPQQQGSLPEQYAH 141
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 68/112 (60%), Gaps = 11/112 (9%)
Query: 77 RESFKKRKADKVQNTKASEVQKHDYIHVR----------ARRGQATDSHSLAERVRREKI 126
+ + K++ D ++ SE + + + VR ++R +A + H+L+ER RR++I
Sbjct: 283 KHNLKRKCRDTEESECPSEDVEEESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRI 342
Query: 127 SERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+ +SM P +
Sbjct: 343 NEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSMGTGLCMPPM 393
>gi|224075772|ref|XP_002304761.1| predicted protein [Populus trichocarpa]
gi|222842193|gb|EEE79740.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 49/69 (71%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISERM+ LQDLVP +K T + MLD ++Y++ LQRQ
Sbjct: 344 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 403
Query: 164 VEFLSMKLA 172
+ LS A
Sbjct: 404 FKALSENRA 412
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
ARR +A + H+L+ER RR++I+E+MK LQ+L+P CNK T KA MLDE I Y+++LQ QV+
Sbjct: 262 ARRSRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQ 320
Query: 166 FLSMKLAAVNPRLDF 180
+ M P + F
Sbjct: 321 MMWMGSGMAPPAVMF 335
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%)
Query: 102 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 161
+ +RA+RG AT S+AERVRR KISERM+ LQDLVP +K T A MLD ++Y++ LQ
Sbjct: 330 MKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQ 389
Query: 162 RQVEFL 167
+Q + L
Sbjct: 390 KQAQKL 395
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 67/111 (60%), Gaps = 11/111 (9%)
Query: 78 ESFKKRKADKVQNTKASEVQKHDYIHVR----------ARRGQATDSHSLAERVRREKIS 127
E+ K++ D ++ SE + + + + ++R +A + H+L+ER RR++I+
Sbjct: 415 ENLKRKHRDTEESEGPSEDVEEESVGAKKQAPARAGNGSKRNRAAEVHNLSERRRRDRIN 474
Query: 128 ERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+ +SM P +
Sbjct: 475 EKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSMGAGLYMPSM 524
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 464 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 522
Query: 166 FLSMKLAAVNPRL 178
+SM P++
Sbjct: 523 MMSMGAGLYMPQM 535
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 516
Query: 166 FLSMKLAAVNPRLDF 180
+SM P + F
Sbjct: 517 IMSMGAGLFMPPMMF 531
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 74/128 (57%), Gaps = 14/128 (10%)
Query: 54 EAVDVKGKVSVAALNEKVSAAVGR--ESFKKRKADKVQNTKASEVQKHD----------Y 101
+A + G + +++ A G+ ES++++K +Q + S Q D
Sbjct: 317 KASEAAGATATSSVCSGNGAGTGKDDESWRQQKRKTLQ-AECSASQDDDPDDESGGMRRS 375
Query: 102 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 161
A+R + + H+L+ER RR++I+E+M+ LQ+L+P CNKI KA MLDE I Y+++LQ
Sbjct: 376 CSRGAKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQ 434
Query: 162 RQVEFLSM 169
QV+ +SM
Sbjct: 435 LQVQMMSM 442
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/64 (62%), Positives = 46/64 (71%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RARRG AT S+AER RR +ISERMK LQDLVP +K T A MLDE + YV+ LQ QV
Sbjct: 16 RARRGYATHPRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADMLDEAVEYVKHLQTQV 75
Query: 165 EFLS 168
+ LS
Sbjct: 76 KDLS 79
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 51/63 (80%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
+R ++++ H+L+ER RR++I+E+M+ LQ+LVP CNK KA ML+E+I Y++SLQ QV+
Sbjct: 217 KRSRSSEVHNLSERRRRDRINEKMRALQELVPCCNKQVDKASMLEEVIEYLKSLQMQVQA 276
Query: 167 LSM 169
+SM
Sbjct: 277 MSM 279
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 74/128 (57%), Gaps = 14/128 (10%)
Query: 54 EAVDVKGKVSVAALNEKVSAAVGR--ESFKKRKADKVQNTKASEVQKHD----------Y 101
+A + G + +++ A G+ ES++++K +Q + S Q D
Sbjct: 114 KASEAAGATATSSVCSGNGAGTGKDDESWRQQKRKTLQ-AECSASQDDDPDDESGGMRRS 172
Query: 102 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 161
A+R + + H+L+ER RR++I+E+M+ LQ+L+P CNKI KA MLDE I Y+++LQ
Sbjct: 173 CSRGAKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQ 231
Query: 162 RQVEFLSM 169
QV+ +SM
Sbjct: 232 LQVQMMSM 239
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 367 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 425
Query: 166 FLSM 169
+SM
Sbjct: 426 IMSM 429
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
+R A + H+L+ER RR++I+E+MK LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 272 TKRSHAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 330
Query: 166 FLSMKLAAV 174
+SM V
Sbjct: 331 MMSMGCGMV 339
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 55/87 (63%)
Query: 82 KRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCN 141
K AD K + Q +RA+RG AT S+AERVRR +ISERM+ LQ+LVP +
Sbjct: 197 KTSADLTTIEKYLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMD 256
Query: 142 KITGKAGMLDEIINYVQSLQRQVEFLS 168
K T + MLD ++Y++ LQ+QV+ LS
Sbjct: 257 KQTNTSDMLDLAVDYIKDLQKQVKTLS 283
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR KISERM+ LQ+LVP +K T + MLD + Y++ LQ+Q
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQ 418
Query: 164 VEFLS 168
V+ LS
Sbjct: 419 VQTLS 423
>gi|42569863|ref|NP_181757.2| transcription factor bHLH130 [Arabidopsis thaliana]
gi|75288858|sp|Q66GR3.1|BH130_ARATH RecName: Full=Transcription factor bHLH130; AltName: Full=Basic
helix-loop-helix protein 130; Short=AtbHLH130;
Short=bHLH 130; AltName: Full=Transcription factor EN
69; AltName: Full=bHLH transcription factor bHLH130
gi|51536448|gb|AAU05462.1| At2g42280 [Arabidopsis thaliana]
gi|52421281|gb|AAU45210.1| At2g42280 [Arabidopsis thaliana]
gi|110737862|dbj|BAF00869.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255005|gb|AEC10099.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 359
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 55/84 (65%)
Query: 85 ADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIT 144
+D V K ++Q +RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T
Sbjct: 260 SDMVSVDKYLQLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQT 319
Query: 145 GKAGMLDEIINYVQSLQRQVEFLS 168
+ MLD ++Y++ LQRQ + L+
Sbjct: 320 NTSDMLDLAVDYIKDLQRQYKILN 343
>gi|2673918|gb|AAB88652.1| unknown protein [Arabidopsis thaliana]
Length = 380
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 55/84 (65%)
Query: 85 ADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIT 144
+D V K ++Q +RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T
Sbjct: 281 SDMVSVDKYLQLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQT 340
Query: 145 GKAGMLDEIINYVQSLQRQVEFLS 168
+ MLD ++Y++ LQRQ + L+
Sbjct: 341 NTSDMLDLAVDYIKDLQRQYKILN 364
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR KISERM+ LQ+LVP +K T + MLD + Y++ LQ+Q
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQ 418
Query: 164 VEFLS 168
V+ LS
Sbjct: 419 VQTLS 423
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 461 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 519
Query: 166 FLSMKLAAVNPRL 178
+SM P +
Sbjct: 520 IMSMGAGLYMPSM 532
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 431 SKRSRAAEVHNLSERKRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 489
Query: 166 FLSM 169
+SM
Sbjct: 490 IMSM 493
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 357 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQM 415
Query: 167 LSMKLAAV 174
+SM + V
Sbjct: 416 MSMGCSMV 423
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK + KA MLDE I Y++SLQ QV+
Sbjct: 363 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 421
Query: 166 FLSMKLAAV 174
+SM + V
Sbjct: 422 MMSMGCSMV 430
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 10/92 (10%)
Query: 92 KASEVQKHDYI-----HVRA----RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 142
K E DY+ VR +R +A + H+L+ER RR++I+E+MK LQ+L+P CNK
Sbjct: 274 KGKETDDSDYLCYSTKQVRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK 333
Query: 143 ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAV 174
KA MLDE I Y+++LQ QV+ +SM V
Sbjct: 334 -ADKASMLDEAIEYLKTLQLQVQMMSMGCGMV 364
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ QV+
Sbjct: 324 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 382
Query: 166 FLSMKLAAVNP 176
+ M P
Sbjct: 383 MMWMGSGIAAP 393
>gi|168045219|ref|XP_001775076.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673663|gb|EDQ60183.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 73
Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/71 (56%), Positives = 48/71 (67%)
Query: 102 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 161
+ RA+RG AT S+AERVRR +ISERMK LQDLVP K T A MLDE + YV+SLQ
Sbjct: 3 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTADMLDETVEYVKSLQ 62
Query: 162 RQVEFLSMKLA 172
+V L +A
Sbjct: 63 VKVSELQETIA 73
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD + Y++ LQ+Q
Sbjct: 294 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPHMDKQTNTADMLDLAVEYIKDLQKQ 353
Query: 164 VEFLSMKLAAVN----PRLDFN 181
+ LS K A P+ D N
Sbjct: 354 FKTLSEKRANCKCISMPKADTN 375
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 49/69 (71%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD + Y++ LQ+Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 359
Query: 164 VEFLSMKLA 172
+ LS K A
Sbjct: 360 FKTLSEKRA 368
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 55/84 (65%)
Query: 85 ADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIT 144
+D V K ++Q +RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T
Sbjct: 260 SDMVSVDKYLQLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQT 319
Query: 145 GKAGMLDEIINYVQSLQRQVEFLS 168
+ MLD ++Y++ LQRQ + L+
Sbjct: 320 NTSDMLDLAVDYIKDLQRQYKILN 343
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
Query: 92 KASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLD 151
+ASE K + RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA +LD
Sbjct: 306 EASEETKPSRRYGTKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILD 364
Query: 152 EIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEM 207
E I Y++SLQ QV+ + M + + P + V + A + P P S+M
Sbjct: 365 ETIEYLKSLQMQVQIMWMT-SGMAPMMFPGVHQFIPQMALGMNPGCIPAAQGLSQM 419
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK T KA MLDE I Y+++LQ QV+
Sbjct: 312 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-TDKASMLDEAIEYLKTLQLQVQ 370
Query: 166 FLSM 169
+SM
Sbjct: 371 MMSM 374
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 76 GRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
GRE R D + E + + RR +A + H+L+ER RR++I+E+M+ LQ+
Sbjct: 287 GREDSDSRSED-AECEATEETKSSSRRYGSKRRTRAAEVHNLSERRRRDRINEKMRALQE 345
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
L+P CNK T KA +LDE I Y++SLQ QV+ + M
Sbjct: 346 LIPHCNK-TDKASILDEAIEYLKSLQMQVQIMWM 378
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 76 GRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
GRE R D + E + + RR +A + H+L+ER RR++I+E+M+ LQ+
Sbjct: 187 GREDSDSRSED-AECEATEETKSSSRRYGSKRRTRAAEVHNLSERRRRDRINEKMRALQE 245
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
L+P CNK T KA +LDE I Y++SLQ QV+ + M
Sbjct: 246 LIPHCNK-TDKASILDEAIEYLKSLQMQVQIMWM 278
>gi|312282767|dbj|BAJ34249.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T + MLD ++Y++ LQRQ
Sbjct: 285 VRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 344
Query: 164 VEFLS 168
+ L+
Sbjct: 345 YKILN 349
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 76 GRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
GRE R D + E + + RR +A + H+L+ER RR++I+E+M+ LQ+
Sbjct: 198 GREDSDSRSED-AECEATEETKSSSRRYGSKRRTRAAEVHNLSERRRRDRINEKMRALQE 256
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
L+P CNK T KA +LDE I Y++SLQ QV+ + M
Sbjct: 257 LIPHCNK-TDKASILDEAIEYLKSLQMQVQIMWM 289
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 8 PDPAFENGWPDLGKIVAPAAGYGFGPGFEASYAISRTSSSPPAVVPEAVDVKGKVSVAAL 67
P PAF + +AP+ G GF SY ++ SSP + V
Sbjct: 80 PSPAFHRQNSSPPEFLAPS---GIAEGFYTSYPLN---SSPTLDISPTSKPSTDVDAQNF 133
Query: 68 NEKVSAAVGRESFKKRKADKVQNTKASEVQK--HDYI--HVRARRGQATDSHSLAERVRR 123
K S + KR+ V + E++K D + VRA+RG AT S+AERVRR
Sbjct: 134 FPKFSPQL------KREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRR 187
Query: 124 EKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
+IS+R++ LQ++VP +K T A ML+E + YV+ LQ+Q++ L+
Sbjct: 188 TRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELT 232
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIT-GKAGMLDEIINYVQSLQR 162
VRA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLDE + YV+SLQ+
Sbjct: 468 VRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNSDKQTVNIADMLDEAVEYVKSLQK 527
Query: 163 QVEFLS 168
QV+ L+
Sbjct: 528 QVQELA 533
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 49/65 (75%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A MLDE + YV+ LQ+Q
Sbjct: 81 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQKQ 140
Query: 164 VEFLS 168
+E LS
Sbjct: 141 IEELS 145
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 76 GRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
GRE R D + E + + RR +A + H+L+ER RR++I+E+M+ LQ+
Sbjct: 303 GREDSDSRSED-AECEATEETKSSSRRYGSKRRTRAAEVHNLSERRRRDRINEKMRALQE 361
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
L+P CNK T KA +LDE I Y++SLQ QV+ + M
Sbjct: 362 LIPHCNK-TDKASILDEAIEYLKSLQMQVQIMWM 394
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 45/64 (70%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR KISERM+ LQDLVP + T A MLD + Y++ LQ Q
Sbjct: 303 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 362
Query: 164 VEFL 167
V+ L
Sbjct: 363 VKTL 366
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A MLDE + YV+ LQR
Sbjct: 169 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEALAYVKFLQR 228
Query: 163 QVEFLS 168
Q++ L+
Sbjct: 229 QIQELT 234
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R ++ + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y++SLQ QV+
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKSLQLQVQ 397
Query: 166 FLSM 169
+SM
Sbjct: 398 IMSM 401
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 45/64 (70%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR KISERM+ LQDLVP + T A MLD + Y++ LQ Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363
Query: 164 VEFL 167
V+ L
Sbjct: 364 VKAL 367
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 54/90 (60%)
Query: 79 SFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVP 138
S K D V K Q +RA+RG AT S+AERVRR +ISERM+ LQ+LVP
Sbjct: 246 SLPKASVDMVAMEKFLHFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVP 305
Query: 139 GCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
+K T A MLD ++Y++ LQ+Q + LS
Sbjct: 306 NMDKQTNTADMLDLAVDYIKDLQKQYKTLS 335
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R ++ + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y++SLQ QV+
Sbjct: 337 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKSLQLQVQ 395
Query: 166 FLSM 169
+SM
Sbjct: 396 IMSM 399
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNKI KA MLDE I Y+++LQ QV+
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 367
Query: 167 LSM 169
+SM
Sbjct: 368 MSM 370
>gi|168056250|ref|XP_001780134.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668446|gb|EDQ55053.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 74.3 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 102 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 161
+ RA+RG AT S+AERVRR +ISERMK LQDLVP K T + MLDE + YV+SLQ
Sbjct: 1 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTSDMLDETVEYVKSLQ 60
Query: 162 RQVEFLSMKLA 172
+V+ L+ +A
Sbjct: 61 MKVKELTETIA 71
>gi|4678267|emb|CAB41175.1| putative protein [Arabidopsis thaliana]
Length = 137
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 40/47 (85%)
Query: 143 ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKE 189
I G A +LDEIIN+VQSLQRQVE LSM+LAAVNPR+DFN+D + A E
Sbjct: 1 IQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASE 47
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNKI KA MLDE I Y+++LQ QV+
Sbjct: 381 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 439
Query: 167 LSM 169
+SM
Sbjct: 440 MSM 442
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E ++YV+ LQRQ
Sbjct: 188 IRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQRQ 247
Query: 164 VEFLS 168
++ L+
Sbjct: 248 IQELT 252
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 372
Query: 166 FLSM 169
+ M
Sbjct: 373 MMWM 376
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 292 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 351
Query: 164 VEFL 167
V+ L
Sbjct: 352 VKVL 355
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 372
Query: 166 FLSM 169
+ M
Sbjct: 373 MMWM 376
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 285 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 344
Query: 164 VEFL 167
V+ L
Sbjct: 345 VKVL 348
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNKI KA MLDE I Y+++LQ QV+
Sbjct: 402 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 460
Query: 167 LSM 169
+SM
Sbjct: 461 MSM 463
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR KISER++ LQ+LVP K T A MLD ++Y++ LQ+Q
Sbjct: 325 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQ 384
Query: 164 VEFLS 168
V+ L+
Sbjct: 385 VKVLN 389
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 323
Query: 166 FLSMKLAAVNPRLDF 180
+ M P + F
Sbjct: 324 MMWMGGGMAPPAVMF 338
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNKI KA MLDE I Y+++LQ QV+
Sbjct: 437 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 495
Query: 167 LSM 169
+SM
Sbjct: 496 MSM 498
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 323
Query: 166 FLSMKLAAVNPRLDF 180
+ M P + F
Sbjct: 324 MMWMGGGMAPPAVMF 338
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 49/67 (73%)
Query: 102 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 161
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV+ LQ
Sbjct: 184 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQ 243
Query: 162 RQVEFLS 168
RQ++ L+
Sbjct: 244 RQIQELT 250
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNKI KA MLDE I Y+++LQ QV+
Sbjct: 449 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 507
Query: 167 LSM 169
+SM
Sbjct: 508 MSM 510
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 49/67 (73%)
Query: 102 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 161
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV+ LQ
Sbjct: 182 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQ 241
Query: 162 RQVEFLS 168
RQ++ L+
Sbjct: 242 RQIQELT 248
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA MLDE I Y+++LQ QV+
Sbjct: 301 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-ADKASMLDEAIEYLKTLQLQVQ 359
Query: 166 FLSMKLAAV 174
+SM V
Sbjct: 360 MMSMGCGMV 368
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A MLDE + YV+ LQ Q
Sbjct: 118 IRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQ 177
Query: 164 VEFLS 168
+E LS
Sbjct: 178 IEELS 182
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISERM+ LQDL P +K T A MLD + Y++ LQ+Q
Sbjct: 350 IRAKRGFATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTADMLDLAVEYIKDLQKQ 409
Query: 164 VEFL 167
V+ L
Sbjct: 410 VKTL 413
>gi|224139834|ref|XP_002323299.1| predicted protein [Populus trichocarpa]
gi|222867929|gb|EEF05060.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 30 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 89
Query: 164 VEFLS 168
+ LS
Sbjct: 90 YKTLS 94
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y++SLQ QV+
Sbjct: 339 SKRSRLAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKSLQLQVQ 397
Query: 166 FLSM 169
+SM
Sbjct: 398 IMSM 401
>gi|147862096|emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 53/84 (63%)
Query: 82 KRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCN 141
K AD K + Q +RA+RG AT S+AERVRR +ISERM+ LQ+LVP +
Sbjct: 340 KTSADLTTIEKYLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMD 399
Query: 142 KITGKAGMLDEIINYVQSLQRQVE 165
K T + MLD ++Y++ LQ+QV+
Sbjct: 400 KQTNTSDMLDLAVDYIKDLQKQVK 423
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 295 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 353
Query: 166 FLSM 169
+ M
Sbjct: 354 MMWM 357
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (70%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 164 VEFLSMKLAAVN 175
V+ L+ A+
Sbjct: 357 VKALNESRASCT 368
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (70%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 164 VEFLSMKLAAVN 175
V+ L+ A+
Sbjct: 357 VKALNESRASCT 368
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
H RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA +LDE I Y++SLQ
Sbjct: 223 HGPKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDETIEYLKSLQM 281
Query: 163 QVEFLSM 169
QV+ + M
Sbjct: 282 QVQIMWM 288
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISER++ LQ+LVP K T A MLD ++Y++ LQ+Q
Sbjct: 319 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 378
Query: 164 VEFL 167
V+ L
Sbjct: 379 VKVL 382
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 48/67 (71%)
Query: 102 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 161
+RA+RG AT S+AERVRR KISER++ LQ+LVP K T A MLD ++Y++ LQ
Sbjct: 158 CKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQ 217
Query: 162 RQVEFLS 168
+QV+ L+
Sbjct: 218 KQVKVLN 224
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 274 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 332
Query: 166 FLSM 169
+ M
Sbjct: 333 MMWM 336
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISER++ LQ+LVP K T A MLD ++Y++ LQ+Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 377
Query: 164 VEFL 167
V+ L
Sbjct: 378 VKVL 381
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNKI KA MLDE I Y+++LQ QV+
Sbjct: 349 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 407
Query: 167 LSM 169
++M
Sbjct: 408 MAM 410
>gi|356525636|ref|XP_003531430.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 450
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
Query: 91 TKASEVQKHDYIH------VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIT 144
TK S ++K I +RA+RG AT S+AERVRR +ISER+K LQDL P K T
Sbjct: 347 TKMSSIEKFLQIQGSVPCKIRAKRGFATHPRSIAERVRRTRISERIKKLQDLFPKSEKQT 406
Query: 145 GKAGMLDEIINYVQSLQRQVEFLS 168
A MLD + Y++ LQ++V+ LS
Sbjct: 407 STADMLDLAVEYIKDLQQKVKILS 430
>gi|357509821|ref|XP_003625199.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355500214|gb|AES81417.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 319
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT SLAERVRR +ISERM+ LQ++VP +K T + MLD + Y++ LQ+Q
Sbjct: 243 IRAKRGFATHPRSLAERVRRTRISERMRKLQEIVPNIDKQTCTSEMLDLAVEYIKDLQKQ 302
Query: 164 VEFLSMKLAAVNPR 177
++ +S K A R
Sbjct: 303 LKTMSAKRAKCRCR 316
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNKI KA MLDE I Y+++LQ QV+
Sbjct: 159 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLDEAIEYLKTLQLQVQM 217
Query: 167 LSM 169
++M
Sbjct: 218 MAM 220
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISER++ LQ+LVP K T A MLD ++Y++ LQ+Q
Sbjct: 297 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 356
Query: 164 VEFLS 168
V+ L+
Sbjct: 357 VKVLN 361
>gi|356572238|ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+
Sbjct: 129 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 187
Query: 163 QVEFLSM 169
QV+ LSM
Sbjct: 188 QVKVLSM 194
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (70%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 194 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 253
Query: 164 VEFLSMKLAAVN 175
V+ L+ A+
Sbjct: 254 VKALNESRASCT 265
>gi|356504971|ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 130 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 188
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 189 VKVLSM 194
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 76 GRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
GR+ R D +A+E K H RR +A + H+ +ER RR++I+E+M+ LQ+
Sbjct: 203 GRDDSDSRSEDA--EFEATEETKSSRRHGSKRRSRAAEVHNQSERRRRDRINEKMRSLQE 260
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
L+P CNK KA +LDE I Y++SLQ Q++ + M
Sbjct: 261 LIPHCNKAD-KASILDEAIEYLKSLQMQLQIMWM 293
>gi|242084064|ref|XP_002442457.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
gi|241943150|gb|EES16295.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
Length = 353
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
+RR + H+L E+ RR KI+ER+K LQ LVPGC+K + +A LD+ I+Y++SLQ+QV+
Sbjct: 188 SRRSHHGEGHNLTEKRRRHKINERLKTLQKLVPGCSK-SNQASTLDQTIHYMKSLQQQVQ 246
Query: 166 FLSMKLAA 173
+S+ LAA
Sbjct: 247 AMSVGLAA 254
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISERM+ LQ+L P +K T A MLD + Y++ LQ+Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQ 392
Query: 164 VEFLS 168
V+ L+
Sbjct: 393 VKTLN 397
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 31 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQV 89
Query: 167 LSM 169
+ M
Sbjct: 90 MWM 92
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 322 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 381
Query: 164 VEFLS 168
V+ L+
Sbjct: 382 VKGLN 386
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV+ LQ+
Sbjct: 182 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQK 241
Query: 163 QVEFLS 168
Q++ L+
Sbjct: 242 QIQELT 247
>gi|224066311|ref|XP_002302077.1| predicted protein [Populus trichocarpa]
gi|222843803|gb|EEE81350.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+
Sbjct: 137 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 195
Query: 163 QVEFLSM 169
QV+ LSM
Sbjct: 196 QVKILSM 202
>gi|356504823|ref|XP_003521194.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 387
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 50/69 (72%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 303 IRAKRGFATHPRSIAERVRRTRISERIRKLQELVPTMDKQTSTAEMLDLALDYIKDLQKQ 362
Query: 164 VEFLSMKLA 172
+ LS K A
Sbjct: 363 FKTLSDKRA 371
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
A+R + + H+++ER RR++I+E+M+ LQ+L+P CNKI KA ML+E I Y+++LQ QV+
Sbjct: 257 AKRSRTAEVHNMSERRRRDRINEKMRALQELIPNCNKI-DKASMLEEAIEYLKTLQLQVQ 315
Query: 166 FLSMKLAAVNP 176
+SM P
Sbjct: 316 MMSMGTGLCMP 326
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 51/72 (70%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 317 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 376
Query: 164 VEFLSMKLAAVN 175
V+ L+ A+
Sbjct: 377 VKALNESRASCT 388
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNKI KA ML+E I Y+++LQ QV+
Sbjct: 331 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLEEAIEYLKTLQLQVQ 389
Query: 166 FLSM 169
+SM
Sbjct: 390 MMSM 393
>gi|357440517|ref|XP_003590536.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479584|gb|AES60787.1| Transcription factor UNE12 [Medicago truncatula]
Length = 282
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 120 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 178
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 179 VKVLSM 184
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 377
Query: 164 VEFLS 168
V+ L+
Sbjct: 378 VKGLN 382
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV+ LQ+
Sbjct: 83 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKGLQK 142
Query: 163 QVEFL 167
Q+E L
Sbjct: 143 QIEEL 147
>gi|225437207|ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297735488|emb|CBI17928.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+
Sbjct: 126 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 184
Query: 163 QVEFLSM 169
QV+ LSM
Sbjct: 185 QVKVLSM 191
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNKI KA ML+E I Y+++LQ QV+
Sbjct: 331 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLEEAIEYLKTLQLQVQ 389
Query: 166 FLSM 169
+SM
Sbjct: 390 MMSM 393
>gi|255559915|ref|XP_002520976.1| DNA binding protein, putative [Ricinus communis]
gi|223539813|gb|EEF41393.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 137 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 195
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 196 VKVLSM 201
>gi|357440519|ref|XP_003590537.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479585|gb|AES60788.1| Transcription factor UNE12 [Medicago truncatula]
Length = 285
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 123 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 181
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 182 VKVLSM 187
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ+Q
Sbjct: 69 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 128
Query: 164 VEFLS 168
V+ L+
Sbjct: 129 VKGLN 133
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISERM+ LQ+L P +K T A MLD + Y++ LQ+Q
Sbjct: 171 IRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQ 230
Query: 164 VEFLS 168
V+ L+
Sbjct: 231 VKTLN 235
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
RR +A + H+++ER RR++I+E+M+ LQ+LVP CNK T KA +LDE I Y++SLQ QV+
Sbjct: 245 RRTRAAEVHNMSERRRRDRINEKMRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 303
Query: 167 LSM 169
+ M
Sbjct: 304 MWM 306
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD + Y++ LQ+Q
Sbjct: 271 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVVYIKDLQKQ 330
Query: 164 VEFLS 168
+ LS
Sbjct: 331 YKTLS 335
>gi|223702398|gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
Length = 297
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 135 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 193
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 194 VKVLSM 199
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 15/117 (12%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK T KA +LDE I Y++SLQ QV+
Sbjct: 225 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 283
Query: 167 LSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMS-SEMTHPAAYLHQFNSLQQ 222
+ M V P + FP P +GM + P A N +Q+
Sbjct: 284 MWMTTGIV-PMM------------FPGTHQLMPPMGMGLNTACMPGAQAQGLNQMQR 327
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD + Y++ LQ+Q
Sbjct: 321 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 380
Query: 164 VEFLS 168
L+
Sbjct: 381 YNTLT 385
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
+R +A + H+L+ER RR++I+E+MK LQ+L+P NK + KA MLDE I+Y++SLQ QV+
Sbjct: 254 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNK-SDKASMLDEAIDYLKSLQLQVQ 312
Query: 166 FLSMKLAAV 174
+SM V
Sbjct: 313 MMSMGCGMV 321
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNKI KA ML+E I Y+++LQ QV+
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQM 379
Query: 167 LS 168
+S
Sbjct: 380 MS 381
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNKI KA ML+E I Y+++LQ QV+
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQM 379
Query: 167 LS 168
+S
Sbjct: 380 MS 381
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 22 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 80
Query: 166 FLSMK 170
LSM+
Sbjct: 81 MLSMR 85
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 15/117 (12%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK T KA +LDE I Y++SLQ QV+
Sbjct: 222 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 280
Query: 167 LSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMS-SEMTHPAAYLHQFNSLQQ 222
+ M V P + FP P +GM + P A N +Q+
Sbjct: 281 MWMTTGIV-PMM------------FPGTHQLMPPMGMGLNTACMPGAQAQGLNQMQR 324
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 76 GRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
G++ R D +A+E K H RR +A + H+ +ER RR++I+E+M+ LQ+
Sbjct: 174 GKDDSDSRSEDV--ECEATEETKSSRRHGSKRRSRAAEVHNQSERRRRDRINEKMRSLQE 231
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
L+P CNK KA +LDE I Y++SLQ QV+ + M
Sbjct: 232 LIPHCNKAD-KASILDEAIEYLKSLQMQVQVMWM 264
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD + Y++ LQ+Q
Sbjct: 310 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 369
Query: 164 VEFLS 168
L+
Sbjct: 370 YNTLT 374
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 76 GRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQD 135
G++ R D +A+E K H RR +A + H+ +ER RR++I+E+M+ LQ+
Sbjct: 165 GKDDSDSRSEDV--ECEATEETKSSRRHGSKRRSRAAEVHNQSERRRRDRINEKMRSLQE 222
Query: 136 LVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
L+P CNK KA +LDE I Y++SLQ QV+ + M
Sbjct: 223 LIPHCNKAD-KASILDEAIEYLKSLQMQVQVMWM 255
>gi|414590534|tpg|DAA41105.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ+Q
Sbjct: 288 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 347
Query: 164 VE 165
V+
Sbjct: 348 VK 349
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK T KA +LDE I Y++SLQ QV+
Sbjct: 226 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 284
Query: 167 LSMKLAAV 174
+ M V
Sbjct: 285 MWMTTGIV 292
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 15/117 (12%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK T KA +LDE I Y++SLQ QV+
Sbjct: 325 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 383
Query: 167 LSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMS-SEMTHPAAYLHQFNSLQQ 222
+ M V P + FP P +GM + P A N +Q+
Sbjct: 384 MWMTTGIV-PMM------------FPGTHQLMPPMGMGLNTACMPGAQAQGLNQMQR 427
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNKI KA ML+E I Y+++LQ QV+
Sbjct: 325 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQM 383
Query: 167 LS 168
+S
Sbjct: 384 MS 385
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNKI KA ML+E I Y+++LQ QV+
Sbjct: 115 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI-DKASMLEEAIEYLKTLQLQVQ 173
Query: 166 FLSM 169
+SM
Sbjct: 174 MMSM 177
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 228
Query: 166 FLSMK 170
LSM+
Sbjct: 229 MLSMR 233
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNKI KA ML+E I Y+++LQ QV+
Sbjct: 266 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQM 324
Query: 167 LS 168
+S
Sbjct: 325 MS 326
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
ARR ++ + H+ +ER RR+KI+E++K LQ+L+P CNK T K MLDE I+Y++SLQ Q++
Sbjct: 14 ARRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNK-TDKVSMLDEAIDYLKSLQLQLQ 72
Query: 166 FLSM 169
L M
Sbjct: 73 MLVM 76
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T A MLD + Y++ LQ+Q
Sbjct: 196 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 255
Query: 164 VEFLS 168
L+
Sbjct: 256 YNTLT 260
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 50/71 (70%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 307 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQ 366
Query: 164 VEFLSMKLAAV 174
V+ ++ A+
Sbjct: 367 VKVINESRASC 377
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 154 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 212
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 213 VKVLSM 218
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 228
Query: 166 FLSMK 170
LSM+
Sbjct: 229 MLSMR 233
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNKI KA ML+E I Y+++LQ QV+
Sbjct: 210 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQ 268
Query: 166 FLSM 169
+SM
Sbjct: 269 MMSM 272
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 15/117 (12%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK T KA +LDE I Y++SLQ QV+
Sbjct: 401 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 459
Query: 167 LSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMS-SEMTHPAAYLHQFNSLQQ 222
+ M V P + FP P +GM + P A N +Q+
Sbjct: 460 MWMTTGIV-PMM------------FPGTHQLMPPMGMGLNTACMPGAQAQGLNQMQR 503
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQ 359
Query: 164 VEFL 167
V+ +
Sbjct: 360 VKVI 363
>gi|42567227|ref|NP_194608.3| transcription factor bHLH23 [Arabidopsis thaliana]
gi|75313939|sp|Q9SVU6.1|BH023_ARATH RecName: Full=Transcription factor bHLH23; AltName: Full=Basic
helix-loop-helix protein 23; Short=AtbHLH23; Short=bHLH
23; AltName: Full=Transcription factor EN 107; AltName:
Full=bHLH transcription factor bHLH023
gi|4218119|emb|CAA22973.1| putative protein [Arabidopsis thaliana]
gi|7269734|emb|CAB81467.1| putative protein [Arabidopsis thaliana]
gi|225898825|dbj|BAH30543.1| hypothetical protein [Arabidopsis thaliana]
gi|332660145|gb|AEE85545.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 413
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 5/98 (5%)
Query: 81 KKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
K R+ V+N E + ++R +A H L+ER RR+KI+E MK LQ+L+P C
Sbjct: 252 KTREETNVENQGTEEARDS----TSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRC 307
Query: 141 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL 178
K T ++ MLD++I YV+SLQ Q++ SM + P +
Sbjct: 308 TK-TDRSSMLDDVIEYVKSLQSQIQMFSMGHVMIPPMM 344
>gi|145334165|ref|NP_001078463.1| transcription factor bHLH127 [Arabidopsis thaliana]
gi|75296238|sp|Q7XHI7.1|BH127_ARATH RecName: Full=Transcription factor bHLH127; AltName: Full=Basic
helix-loop-helix protein 127; Short=AtbHLH127;
Short=bHLH 127; AltName: Full=bHLH transcription factor
bHLH127
gi|33111973|emb|CAE12173.1| putative bHLH127 transcription factor [Arabidopsis thaliana]
gi|332660148|gb|AEE85548.1| transcription factor bHLH127 [Arabidopsis thaliana]
Length = 307
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 8/94 (8%)
Query: 83 RKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 142
R A ++Q T+ + +R +A + H+LAER RREKI+ERMK LQ L+P CNK
Sbjct: 129 RSAPRIQGTEEARGS------TSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNK 182
Query: 143 ITGKAGMLDEIINYVQSLQRQV-EFLSMKLAAVN 175
T K ML+++I YV+SL+ Q+ +F+ +N
Sbjct: 183 ST-KVSMLEDVIEYVKSLEMQINQFMPHMAMGMN 215
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV++LQ Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240
Query: 164 VEFLS 168
++ L+
Sbjct: 241 IQELT 245
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
A+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK+ K+ ML+E I Y+++LQ QV+
Sbjct: 318 AKRCRTAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KSSMLEEAIEYLKTLQLQVQ 376
Query: 166 FLSMKLAAVNP 176
+SM P
Sbjct: 377 MMSMGTGLCMP 387
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 139 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 197
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 198 VKVLSM 203
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
+R +A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 180 TKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 238
Query: 166 FLSMK 170
LSMK
Sbjct: 239 MLSMK 243
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR KISER++ LQ+LVP K T + MLD ++Y++ LQ Q
Sbjct: 327 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 386
Query: 164 VEFLS 168
V+ ++
Sbjct: 387 VKVMN 391
>gi|297848526|ref|XP_002892144.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337986|gb|EFH68403.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 148 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 206
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 207 VKVLSM 212
>gi|18379045|ref|NP_563672.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|75305862|sp|Q93Y00.1|BH007_ARATH RecName: Full=Transcription factor bHLH7; AltName: Full=Basic
helix-loop-helix protein 7; Short=AtbHLH7; Short=bHLH 7;
AltName: Full=Transcription factor EN 92; AltName:
Full=bHLH transcription factor bHLH007
gi|21735477|gb|AAL55714.2|AF251692_1 putative transcription factor BHLH7 [Arabidopsis thaliana]
gi|15450779|gb|AAK96661.1| Unknown protein [Arabidopsis thaliana]
gi|21387097|gb|AAM47952.1| unknown protein [Arabidopsis thaliana]
gi|332189397|gb|AEE27518.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 302
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 202
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 203 VKVLSM 208
>gi|226510391|ref|NP_001150862.1| LOC100284495 [Zea mays]
gi|195642440|gb|ACG40688.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 359
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRG AT S+AER RR +IS+R+K LQDLVP +K T + MLD ++Y++ L+ Q
Sbjct: 280 VRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDQ 339
Query: 164 VEFL 167
VE L
Sbjct: 340 VEKL 343
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
+R +A + H+LAER RREKI+E+MK LQ+L+P CNK T K L+++I Y++SLQ Q++
Sbjct: 1139 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLEDVIEYMKSLQMQIQM 1197
Query: 167 LS 168
+S
Sbjct: 1198 MS 1199
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 60/98 (61%), Gaps = 6/98 (6%)
Query: 74 AVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYL 133
A GRE +K + + + + +E + R+R A + H+LAER RREKI+E+MK L
Sbjct: 1541 ADGRE--RKEREETIAGIQGTEEARGSTSRKRSR---AAEMHNLAERRRREKINEKMKTL 1595
Query: 134 QDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKL 171
Q+L+P CNK T K L+++I YV+SL+ Q++ M
Sbjct: 1596 QELIPRCNKST-KVSTLEDVIEYVKSLEMQIQHYVMNF 1632
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Query: 59 KGKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRA----RRGQATDS 114
KGK V E S+ V K + + VQ A+ V+ R +R + +
Sbjct: 534 KGKAVVIETAETPSSGVC-----KAETEPVQIQPATIVEIQGTEEARGSMSRKRSRTAEM 588
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAV 174
H+LAER RREKI+E +K LQ+L+P CNK T K LD+ I YV+ LQ Q++ +S +
Sbjct: 589 HNLAERRRREKINENIKTLQELIPRCNKST-KVSTLDDAIEYVKWLQSQIQMMSTGQGMM 647
Query: 175 NPRL 178
P +
Sbjct: 648 PPMM 651
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
+R +A + H+LAER RREKI+E+MK LQ+L+P CNK T K LD I YV+ LQ Q++
Sbjct: 135 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLDAAIEYVKWLQSQIQM 193
Query: 167 LSM 169
+ M
Sbjct: 194 ILM 196
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 59/72 (81%), Gaps = 2/72 (2%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 164 VEFLSM-KLAAV 174
V+ LSM +L V
Sbjct: 205 VKVLSMSRLGGV 216
>gi|297809891|ref|XP_002872829.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
gi|297318666|gb|EFH49088.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 205 VKVLSM 210
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 77 RESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 136
++S A+ V+ A + + A+R +A + H+L+ER RR++I+E+MK LQ+L
Sbjct: 281 KQSVDATDAEDVEFESADVTCEPAHKTATAKRRRAAEVHNLSERRRRDRINEKMKALQEL 340
Query: 137 VPGCNKITGKAGMLDEIINYVQSLQRQVE 165
+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 341 IPHCNK-TDKASMLDEAIEYLKSLQLQLQ 368
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 19/113 (16%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 142 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 200
Query: 166 FLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQFN 218
L+M+ +PVC P + +E++H H+ N
Sbjct: 201 MLTMRNGV---------------SLYPVC---LPGVLQPNEISHMRMGYHEGN 235
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV++LQ Q
Sbjct: 178 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQGQ 237
Query: 164 VEFLS 168
++ L+
Sbjct: 238 IQELT 242
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%), Gaps = 5/83 (6%)
Query: 92 KASEVQKHDYIHVRAR----RGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKA 147
K +EV + VR R R +A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA
Sbjct: 103 KGAEVAEVPSETVRPRNSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKA 161
Query: 148 GMLDEIINYVQSLQRQVEFLSMK 170
MLDE I Y++ LQ QV+ L+M+
Sbjct: 162 SMLDEAIEYLKQLQLQVQMLTMR 184
>gi|18411987|ref|NP_567245.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|79324985|ref|NP_001031577.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|75277341|sp|O22768.2|UNE12_ARATH RecName: Full=Transcription factor UNE12; AltName: Full=Basic
helix-loop-helix protein 59; Short=AtbHLH59; Short=bHLH
59; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 12;
AltName: Full=Transcription factor EN 93; AltName:
Full=bHLH transcription factor bHLH059
gi|13605859|gb|AAK32915.1|AF367328_1 AT4g02590/T10P11_13 [Arabidopsis thaliana]
gi|3892050|gb|AAC78259.1| hypothetical protein [Arabidopsis thaliana]
gi|7269019|emb|CAB80752.1| hypothetical protein [Arabidopsis thaliana]
gi|23506061|gb|AAN28890.1| At4g02590/T10P11_13 [Arabidopsis thaliana]
gi|222422973|dbj|BAH19471.1| AT4G02590 [Arabidopsis thaliana]
gi|332656799|gb|AEE82199.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656800|gb|AEE82200.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 310
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 205 VKVLSM 210
>gi|223702400|gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lotus japonicus]
Length = 275
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 123 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAVMLDEIVDYVKFLRLQ 181
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 182 VKVLSM 187
>gi|20127058|gb|AAM10948.1|AF488592_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 205 VKVLSM 210
>gi|312281971|dbj|BAJ33851.1| unnamed protein product [Thellungiella halophila]
Length = 310
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 205 VKVLSM 210
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
ARR +A H+ +ER RR++I+E+MK LQ LVP +K T KA MLDE+I Y++ LQ QV+
Sbjct: 257 ARRSRAAAIHNQSERRRRDRINEKMKALQKLVPNASK-TDKASMLDEVIEYLKQLQAQVQ 315
Query: 166 FLSMK 170
F+S++
Sbjct: 316 FMSVR 320
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 23/119 (19%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +AT+ H+L+ER RR++I+++M+ LQDL+P NK+ KA ML E I+Y++SLQ QV+
Sbjct: 377 SKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKVD-KASMLGEAIDYLKSLQLQVQ 435
Query: 166 FLSMK---------------------LAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGM 203
+SM LA +P + +D + P+ FP GM
Sbjct: 436 MMSMGTRLCMPLMMLPTGMQHIHAPLLAQFSP-MGVGMDTRLMQMGVGCSPATFPASGM 493
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR KISER++ LQ+LVP K T + MLD ++Y++ LQ Q
Sbjct: 324 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 383
Query: 164 VEFLS 168
V+ ++
Sbjct: 384 VKVMN 388
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 12/103 (11%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
R +R +A + H+L+E+ RR KI+E+MK LQ LVP +K T KA MLD+ I Y++ LQ QV
Sbjct: 45 RGKRARAAEVHNLSEKRRRCKINEKMKALQSLVPNSSK-TDKASMLDDAIEYLKHLQLQV 103
Query: 165 EFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEM 207
+ LSM+ P ++ P P + PT M + +
Sbjct: 104 QMLSMRNGVYRPSVN-----------LPGPPEHLPTSQMCAAL 135
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 23/119 (19%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +AT+ H+L+ER RR++I+++M+ LQDL+P NK+ KA ML E I+Y++SLQ QV+
Sbjct: 371 SKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKVD-KASMLGEAIDYLKSLQLQVQ 429
Query: 166 FLSMK---------------------LAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGM 203
+SM LA +P + +D + P+ FP GM
Sbjct: 430 MMSMGTRLCMPLMMLPTGMQHIHAPLLAQFSP-MGVGMDTRLMQMGVGCSPATFPASGM 487
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV+ LQ+
Sbjct: 174 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQ 233
Query: 163 QVEFLS 168
+++ LS
Sbjct: 234 KIQELS 239
>gi|186511471|ref|NP_001118919.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656801|gb|AEE82201.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 247
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A M+DEI++YV+ L+ Q
Sbjct: 83 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 141
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 142 VKVLSM 147
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 135 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 193
Query: 166 FLSMK 170
LSM+
Sbjct: 194 MLSMR 198
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
Length = 85
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 46/62 (74%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T + MLDE + Y++ LQ+
Sbjct: 24 RLRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKQTNTSDMLDEAVEYMKFLQK 83
Query: 163 QV 164
QV
Sbjct: 84 QV 85
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 70.5 bits (171), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 48/59 (81%), Gaps = 1/59 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
+RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNK+ KA MLDE I Y+++LQ QV+
Sbjct: 1 KRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 58
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
RR ++ + H+ +ER RR+KI+E++K LQ+L+P CNK T K MLDE I+Y++SLQ Q++
Sbjct: 14 TRRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNK-TDKVSMLDEAIDYLKSLQLQLQ 72
Query: 166 FLSM 169
L M
Sbjct: 73 MLVM 76
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
+R +A + H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 102 KRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQM 160
Query: 167 LSMK 170
LSM+
Sbjct: 161 LSMR 164
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 7/71 (9%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI-------TGKAGMLDEIINYVQ 158
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK+ T KA MLDE I Y++
Sbjct: 54 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKLSSFTDSQTDKASMLDEAIEYLK 113
Query: 159 SLQRQVEFLSM 169
+LQ QV+ +
Sbjct: 114 TLQLQVQIFVL 124
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 166 FLSMK 170
LSM+
Sbjct: 158 MLSMR 162
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
A+R +A H+L+ER RR++I+E+M+ LQ+LVP CNK T KA MLDE I Y++SLQ Q++
Sbjct: 233 AKRRRAAQVHNLSERRRRDRINEKMRALQELVPHCNK-TDKASMLDEAIEYLKSLQLQLQ 291
Query: 166 FL 167
+
Sbjct: 292 VM 293
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 166 FLSMK 170
LSM+
Sbjct: 158 MLSMR 162
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A ML+E + YV+ LQ+
Sbjct: 104 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQ 163
Query: 163 QVEFLS 168
+++ LS
Sbjct: 164 KIQELS 169
>gi|224106043|ref|XP_002314023.1| predicted protein [Populus trichocarpa]
gi|222850431|gb|EEE87978.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISERM+ LQ+L P +K T A MLD + +++ LQ+Q
Sbjct: 337 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEHIKDLQKQ 396
Query: 164 VEFLS 168
V+ L+
Sbjct: 397 VKTLT 401
>gi|414879181|tpg|DAA56312.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 231
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%)
Query: 102 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 161
VRARRG AT S+AER RR +IS+R+K LQDLVP +K T + MLD + Y++ L+
Sbjct: 150 CRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVEYIKELK 209
Query: 162 RQVEFL 167
QVE L
Sbjct: 210 DQVEKL 215
>gi|242084068|ref|XP_002442459.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
gi|241943152|gb|EES16297.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
Length = 342
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 51/69 (73%), Gaps = 4/69 (5%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
R+ G+A H L E+ RR KI+ER+K LQ LVPGC+K + +A LD+ I+Y++SLQ+QV
Sbjct: 168 RSHHGEA---HKLTEKRRRHKINERLKTLQQLVPGCSK-SNQASTLDQTIHYMKSLQQQV 223
Query: 165 EFLSMKLAA 173
+ +S+ LAA
Sbjct: 224 QAMSVGLAA 232
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+++E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 154 SKRSRAAEVHNMSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 212
Query: 166 FLSMK 170
LSM+
Sbjct: 213 MLSMR 217
>gi|356557136|ref|XP_003546874.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 445
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 47/69 (68%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AER RR +ISER+K LQDL P K T A MLD + +++ LQ+Q
Sbjct: 361 IRAKRGFATHPRSIAERERRTRISERIKKLQDLFPRSEKPTSTADMLDLAVEHIKDLQQQ 420
Query: 164 VEFLSMKLA 172
V+ LS + A
Sbjct: 421 VQILSDRKA 429
>gi|118488234|gb|ABK95936.1| unknown [Populus trichocarpa]
Length = 283
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 36/40 (90%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI 143
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK+
Sbjct: 241 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKV 280
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 121 SKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 179
Query: 166 FL 167
+L
Sbjct: 180 YL 181
>gi|449436269|ref|XP_004135915.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449521930|ref|XP_004167982.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 419
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AER+RR +ISER+K LQ+L P +K T A ML+ + Y++ LQRQ
Sbjct: 342 IRAKRGCATHPRSIAERMRRTRISERIKKLQELFPDMDKQTSTADMLELAVEYIKGLQRQ 401
Query: 164 VEFLS 168
V+ L+
Sbjct: 402 VKTLT 406
>gi|242084066|ref|XP_002442458.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
gi|241943151|gb|EES16296.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
Length = 340
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 51/69 (73%), Gaps = 4/69 (5%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
R+ G+A H+L E+ RR KI+ER+K LQ LVPGC+K + +A LD+ I+Y++SLQ QV
Sbjct: 162 RSHHGEA---HNLTEKRRRHKINERLKTLQQLVPGCSK-SNQASTLDQTIHYMKSLQHQV 217
Query: 165 EFLSMKLAA 173
+ +S+ LA+
Sbjct: 218 QAMSVGLAS 226
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
A+R +A H+L+ER RR++I+E+MK LQ+L+P CNK KA MLDE I Y++SLQ Q++
Sbjct: 247 AKRRRAAQVHNLSERRRRDRINEKMKALQELIPHCNKAD-KASMLDEAIEYLKSLQLQLQ 305
Query: 166 FLSM 169
+ M
Sbjct: 306 VVWM 309
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|378405153|sp|Q9SVU7.2|BH056_ARATH RecName: Full=Putative transcription factor bHLH056; AltName:
Full=Basic helix-loop-helix protein 56; Short=AtbHLH56;
Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
gi|332660146|gb|AEE85546.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 445
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 17/135 (12%)
Query: 49 PAVVPEAVDVKGKVSVAALNEKVSA----AVGRESFKKRKAD----KVQNTKASEVQKHD 100
PA A V G ++ L K A A G S KA+ ++Q S+++ +
Sbjct: 178 PATEGTASRVSGTLAAHDLGRKGKAVAVEAAGTPSSGVCKAETEPVQIQPATESKLKARE 237
Query: 101 YIH--------VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDE 152
H +R + + H+LAER RREKI+E+MK LQ L+P CNK T K LD+
Sbjct: 238 ETHGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKST-KVSTLDD 296
Query: 153 IINYVQSLQRQVEFL 167
I YV+SLQ Q++ +
Sbjct: 297 AIEYVKSLQSQIQGM 311
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
+R +A + H+L+E+ RR +I+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 159 KRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQM 217
Query: 167 LSMK 170
LSM+
Sbjct: 218 LSMR 221
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+E+ RR +I+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 102 SKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 160
Query: 166 FLSMK 170
LSM+
Sbjct: 161 MLSMR 165
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
RR +A + H+L+ER RR++I+E+M+ LQ+L+P C K T KA MLDE I Y++SLQ Q++
Sbjct: 183 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCYK-TDKASMLDEAIEYLKSLQLQLQV 241
Query: 167 LSM 169
+ M
Sbjct: 242 MWM 244
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K T + MLD ++Y++ LQ Q
Sbjct: 300 VRAKRGCATHPRSIAERERRTRISKRLRRLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQ 359
Query: 164 VEFL 167
+E L
Sbjct: 360 IEKL 363
>gi|388503832|gb|AFK39982.1| unknown [Medicago truncatula]
Length = 406
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +IS+R+K LQ L P +K T A MLD + Y++ LQ Q
Sbjct: 322 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 381
Query: 164 VEFLS 168
V+ L+
Sbjct: 382 VQILT 386
>gi|357457619|ref|XP_003599090.1| DNA binding protein [Medicago truncatula]
gi|355488138|gb|AES69341.1| DNA binding protein [Medicago truncatula]
Length = 403
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +IS+R+K LQ L P +K T A MLD + Y++ LQ Q
Sbjct: 319 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 378
Query: 164 VEFLS 168
V+ L+
Sbjct: 379 VQILT 383
>gi|225446765|ref|XP_002278399.1| PREDICTED: transcription factor PIF5-like [Vitis vinifera]
Length = 531
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
RR +A + H+L+ER RR++I+E+MK LQ+L+P NK + KA MLDE I Y++SLQ Q++
Sbjct: 334 TRRSRAAEVHNLSERRRRDRINEKMKALQELIPHSNK-SDKASMLDEAIEYLKSLQLQLQ 392
Query: 166 FLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTI 201
+ M V P + V + A+ +CP P+I
Sbjct: 393 LMWMG-GGVAPMMFPGVQHYMARMGMGMCPPPLPSI 427
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AER RR +IS R+K LQDL P +K T A MLD + Y++ LQ+Q
Sbjct: 360 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKSDKQTSTADMLDLAVEYIKDLQKQ 419
Query: 164 VEFL 167
V+ L
Sbjct: 420 VKIL 423
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Query: 119 ERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
+R+RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 151 QRLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 200
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 23/80 (28%)
Query: 112 TDSHSLAERV----------------------RREKISERMKYLQDLVPGCNKITGKAGM 149
TD HS+AERV RRE+I+ERMK LQ+LVP NK T KA M
Sbjct: 219 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 277
Query: 150 LDEIINYVQSLQRQVEFLSM 169
LDEII+YV+ LQ QV+ LSM
Sbjct: 278 LDEIIDYVKFLQLQVKVLSM 297
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AER RR +IS R+K LQDL P +K T A MLD + Y++ LQ+Q
Sbjct: 356 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKTDKQTSTADMLDLAVEYIKDLQKQ 415
Query: 164 VEFL 167
V+ L
Sbjct: 416 VKML 419
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R ++ + H+++E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 250
Query: 166 FLSMK 170
LSM+
Sbjct: 251 MLSMR 255
>gi|302143504|emb|CBI22065.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
RR +A + H+L+ER RR++I+E+MK LQ+L+P NK + KA MLDE I Y++SLQ Q++
Sbjct: 334 TRRSRAAEVHNLSERRRRDRINEKMKALQELIPHSNK-SDKASMLDEAIEYLKSLQLQLQ 392
Query: 166 FLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTI 201
+ M V P + V + A+ +CP P+I
Sbjct: 393 LMWMG-GGVAPMMFPGVQHYMARMGMGMCPPPLPSI 427
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 23/80 (28%)
Query: 112 TDSHSLAERV----------------------RREKISERMKYLQDLVPGCNKITGKAGM 149
TD HS+AERV RRE+I+ERMK LQ+LVP NK T KA M
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 278
Query: 150 LDEIINYVQSLQRQVEFLSM 169
LDEII+YV+ LQ QV+ LSM
Sbjct: 279 LDEIIDYVKFLQLQVKVLSM 298
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K T + MLD ++Y++ LQ Q
Sbjct: 295 VRAKRGCATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQ 354
Query: 164 VEFL 167
+E L
Sbjct: 355 IEKL 358
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+ER RR++I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 16 SKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQ 74
Query: 166 FLS 168
LS
Sbjct: 75 VLS 77
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RARRG ATD S+ R RREKI+ER+K LQ LVP K+ MLDE I+YVQ LQ QV
Sbjct: 443 RARRGSATDPQSVYARHRREKINERLKTLQHLVPNGAKV-DIVTMLDEAIHYVQFLQLQV 501
Query: 165 EFL 167
L
Sbjct: 502 TLL 504
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RA+RG ATD S+ R RREKI+ER+K LQ+LVP K+ MLDE I+YV+ LQ QV
Sbjct: 443 RAKRGSATDPQSVYARHRREKINERLKNLQNLVPNGAKV-DIVTMLDEAIHYVKFLQTQV 501
Query: 165 EFL 167
E L
Sbjct: 502 ELL 504
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLD+ I Y++ LQ QV
Sbjct: 27 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQLQLQV 85
Query: 165 EFLSMK 170
+ LSM+
Sbjct: 86 QMLSMR 91
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 23/80 (28%)
Query: 112 TDSHSLAERV----------------------RREKISERMKYLQDLVPGCNKITGKAGM 149
TD HS+AERV RRE+I+ERMK LQ+LVP NK T KA M
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 278
Query: 150 LDEIINYVQSLQRQVEFLSM 169
LDEII+YV+ LQ QV+ LSM
Sbjct: 279 LDEIIDYVKFLQLQVKVLSM 298
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+ER RR++I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 16 SKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQ 74
Query: 166 FLS 168
LS
Sbjct: 75 VLS 77
>gi|222619693|gb|EEE55825.1| hypothetical protein OsJ_04431 [Oryza sativa Japonica Group]
Length = 171
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 44/64 (68%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA+RG AT S+AER RR +IS+R+K LQDLVP +K T + MLD + Y++ LQ Q
Sbjct: 93 ARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQ 152
Query: 164 VEFL 167
VE L
Sbjct: 153 VEKL 156
>gi|312282747|dbj|BAJ34239.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+ L+ Q
Sbjct: 150 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVSK-TDRAAMIDEIVDYVKFLRLQ 208
Query: 164 VEFLSM 169
V+ LSM
Sbjct: 209 VKVLSM 214
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 157 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 215
Query: 166 FLSMK 170
LS++
Sbjct: 216 MLSLR 220
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLD+ I Y++ LQ QV
Sbjct: 49 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQLQLQV 107
Query: 165 EFLSMK 170
+ LSM+
Sbjct: 108 QMLSMR 113
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLD+ I Y++ LQ QV
Sbjct: 49 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQLQLQV 107
Query: 165 EFLSMK 170
+ LSM+
Sbjct: 108 QMLSMR 113
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLD+ I Y++ LQ QV
Sbjct: 41 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKQLQLQV 99
Query: 165 EFLSMK 170
+ LSM+
Sbjct: 100 QMLSMR 105
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 152 SKRSRAAEVHNLSEKRRRNRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKKLQLQVQ 210
Query: 166 FLSMK 170
LS +
Sbjct: 211 MLSAR 215
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
RR ++ D H+ +ER RR++I+E++K LQ+L+P C K T K MLDE I+Y++SLQ Q++
Sbjct: 16 TRRSRSADFHNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQ 74
Query: 166 FLSM 169
L M
Sbjct: 75 MLVM 78
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 14/134 (10%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
RR ++ D H+ +ER RR++I+E+++ LQ+L+P C K T K MLDE I+Y++SLQ Q++
Sbjct: 16 TRRSRSADFHNFSERRRRDRINEKLRALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQ 74
Query: 166 FLSMKLAA-----VNPRLDFNVDNLFAKEAFPVCPSNF--------PTIGMSSEMTHPAA 212
L M V P L + + A A + P P G +TH AA
Sbjct: 75 MLVMGKGGGMAPVVPPELQQYMHYITADPAHQMMPPPLRPSAGQLQPAAGRQFHITHQAA 134
Query: 213 YLHQFNSLQQQAVS 226
+ N Q++ S
Sbjct: 135 AANNDNDPQRRRQS 148
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%), Gaps = 3/66 (4%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQ--DLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
ARR +A + H+L+ER RR++I+E+M+ LQ +L+P CNK T KA MLDE I Y++SLQ Q
Sbjct: 162 ARRSRAAEVHNLSERRRRDRINEKMRALQELELIPHCNK-TDKASMLDEAIEYLKSLQLQ 220
Query: 164 VEFLSM 169
+ + M
Sbjct: 221 LRVMWM 226
>gi|20161601|dbj|BAB90521.1| B1065G12.3 [Oryza sativa Japonica Group]
Length = 234
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 44/64 (68%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA+RG AT S+AER RR +IS+R+K LQDLVP +K T + MLD + Y++ LQ Q
Sbjct: 156 ARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQ 215
Query: 164 VEFL 167
VE L
Sbjct: 216 VEKL 219
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 6/85 (7%)
Query: 86 DKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITG 145
D+ + TK V+ H +RR +A H+ +ER RR++I+++MK LQ LVP +K T
Sbjct: 228 DEDRETKTETVRSHS-----SRRTRAAAVHNQSERRRRDRINQKMKALQKLVPNASK-TD 281
Query: 146 KAGMLDEIINYVQSLQRQVEFLSMK 170
KA MLDE+I Y++ LQ QV+ +S++
Sbjct: 282 KASMLDEVIEYLKQLQAQVQAMSVR 306
>gi|28207148|gb|AAO37214.1| hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 6/80 (7%)
Query: 102 IHVRAR-----RGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 156
+H R R R ++T+ H L ER RR++ +++M+ LQDL+P C K KA +LDE I Y
Sbjct: 216 VHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYK-DDKASLLDEAIKY 274
Query: 157 VQSLQRQVEFLSMKLAAVNP 176
+++LQ QV+ +SM + P
Sbjct: 275 MRTLQLQVQMMSMGNGLIRP 294
>gi|42569994|ref|NP_182220.2| transcription factor PIL1 [Arabidopsis thaliana]
gi|75301051|sp|Q8L5W8.1|PIL1_ARATH RecName: Full=Transcription factor PIL1; AltName: Full=Basic
helix-loop-helix protein 124; Short=AtbHLH124;
Short=bHLH 124; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 1; AltName: Full=Transcription
factor EN 110; AltName: Full=bHLH transcription factor
bHLH124
gi|22535492|dbj|BAC10689.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|61742691|gb|AAX55166.1| hypothetical protein At2g46970 [Arabidopsis thaliana]
gi|330255685|gb|AEC10779.1| transcription factor PIL1 [Arabidopsis thaliana]
Length = 416
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 6/80 (7%)
Query: 102 IHVRAR-----RGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 156
+H R R R ++T+ H L ER RR++ +++M+ LQDL+P C K KA +LDE I Y
Sbjct: 216 VHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYK-DDKASLLDEAIKY 274
Query: 157 VQSLQRQVEFLSMKLAAVNP 176
+++LQ QV+ +SM + P
Sbjct: 275 MRTLQLQVQMMSMGNGLIRP 294
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R ++ + H+++E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 250
Query: 166 FLSMK 170
LSM+
Sbjct: 251 MLSMR 255
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R ++ + H+++E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 250
Query: 166 FLSMK 170
LSM+
Sbjct: 251 MLSMR 255
>gi|323388933|gb|ADX60271.1| bHLH transcription factor [Oryza sativa Japonica Group]
gi|323388951|gb|ADX60280.1| HLH transcription factor [Oryza sativa Japonica Group]
Length = 387
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RA+RG AT S+AER RR +IS+R+K LQDLVP +K T + MLD + Y++ LQ QV
Sbjct: 310 RAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQV 369
Query: 165 EFL 167
E L
Sbjct: 370 EKL 372
>gi|115441653|ref|NP_001045106.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|56784863|dbj|BAD82103.1| putative helix-loop-helix protein 1A [Oryza sativa Japonica Group]
gi|113534637|dbj|BAF07020.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|215687014|dbj|BAG90828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189543|gb|EEC71970.1| hypothetical protein OsI_04807 [Oryza sativa Indica Group]
Length = 387
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RA+RG AT S+AER RR +IS+R+K LQDLVP +K T + MLD + Y++ LQ QV
Sbjct: 310 RAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQV 369
Query: 165 EFL 167
E L
Sbjct: 370 EKL 372
>gi|242055293|ref|XP_002456792.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
gi|241928767|gb|EES01912.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
Length = 361
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRA+RG AT S+AER RR +IS+R+K LQDLVP +K T + MLD ++Y++ L+ +
Sbjct: 281 VRAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDR 340
Query: 164 VEFL 167
VE L
Sbjct: 341 VEKL 344
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLD+ I Y++ LQ QV
Sbjct: 40 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKHLQLQV 98
Query: 165 EFLSMK 170
+ LSM+
Sbjct: 99 QMLSMR 104
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLD+ I Y++ LQ QV
Sbjct: 42 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKHLQLQV 100
Query: 165 EFLSMK 170
+ LSM+
Sbjct: 101 QMLSMR 106
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLD+ I Y++ LQ QV
Sbjct: 40 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKHLQLQV 98
Query: 165 EFLSMK 170
+ LSM+
Sbjct: 99 QMLSMR 104
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
K D R RR + H+L+E+ RREKI+++M+ L++L+P CNK+ KA MLD+ I+Y+
Sbjct: 314 KQDRDGNRVRRIRNPVVHNLSEKKRREKINKKMRTLKELIPNCNKV-DKASMLDDAIDYL 372
Query: 158 QSLQRQVEFLSM 169
++L+ Q++ +SM
Sbjct: 373 KTLKLQLQIMSM 384
>gi|218187187|gb|EEC69614.1| hypothetical protein OsI_38988 [Oryza sativa Indica Group]
Length = 271
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 92 KASEVQKHDYIHVRARRG-QATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGML 150
+ SE K RARR + + +HSL ER RR KI+E +K LQ LVPGC+K +A L
Sbjct: 99 RRSESSKERRKITRARRSSRYSQTHSLTERKRRCKINENLKTLQQLVPGCDKSNNQASTL 158
Query: 151 DEIINYVQSLQRQVEFLSM 169
D+ I Y++SLQ+ V+ +S+
Sbjct: 159 DKTIRYMKSLQQHVQAMSV 177
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 111 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMK 170
A + H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 84 AAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 142
>gi|302813935|ref|XP_002988652.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
gi|300143473|gb|EFJ10163.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
Length = 61
Score = 67.4 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/39 (79%), Positives = 35/39 (89%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 142
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP NK
Sbjct: 1 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK 39
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+E+ RR KI+E++K LQ+L+P NK T KA MLDE I Y++ LQ QV+
Sbjct: 87 SKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 145
Query: 166 FLSMK 170
L ++
Sbjct: 146 MLMVR 150
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
RR ++ D H+ +ER RR++I+E+++ LQ+L+P C K T K MLDE I+Y++SLQ Q++
Sbjct: 15 TRRSRSADFHNFSERRRRDRINEKLRALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQ 73
Query: 166 FLSM 169
L M
Sbjct: 74 MLVM 77
>gi|414868828|tpg|DAA47385.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 327
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
+RR ++H+L E+ RR KI+ER+K LQ +VPGC+K + +A LD+ I+Y++SLQ QV+
Sbjct: 172 SRRSHHGEAHNLTEKRRRHKINERLKTLQQIVPGCSK-SNQASTLDQTIHYMKSLQHQVQ 230
Query: 166 FLS 168
+S
Sbjct: 231 AMS 233
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 10/88 (11%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RA RG ATD SL R RRE+I+ER+K LQ+LVP K+ + ML+E ++YV+ LQ Q+
Sbjct: 217 RAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 275
Query: 165 EFLS---------MKLAAVNPRLDFNVD 183
+ LS + +N LD N+D
Sbjct: 276 KLLSSDEMWMYAPIAYNGMNIGLDLNID 303
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 111 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMK 170
A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+ L+M+
Sbjct: 188 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTMR 246
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
+R +A + H+L+ER RR++I+E+MK LQ+L+P NK + KA MLDE I+Y++SLQ QV+
Sbjct: 254 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNK-SDKASMLDEAIDYLKSLQLQVQ 312
Query: 166 FLSM 169
+ +
Sbjct: 313 RVQL 316
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
RR ++ + H+ +ER RR++I+E++K LQ+L+P C K T K MLDE I+Y++SLQ Q++
Sbjct: 15 TRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQ 73
Query: 166 FLSM 169
L M
Sbjct: 74 MLVM 77
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
V +R +A H+ +ER RR+KI++RMK LQ LVP +K T KA MLDE+I Y++ LQ Q
Sbjct: 277 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 335
Query: 164 VEFLS 168
V+ +S
Sbjct: 336 VQMMS 340
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 111 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMK 170
A + H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 145 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 203
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Query: 63 SVAALNEKVSA--AVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAER 120
S LN+ + A G +F + +K N A Q++ + R R A H+L+E+
Sbjct: 56 STELLNQTLPAISTPGSSNFFAGEENKTNNENALGNQRNKAVRTRQRSIDA-KFHNLSEK 114
Query: 121 VRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS-MKLAAVNP 176
RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+ M +NP
Sbjct: 115 RRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQALAVMNGLGLNP 170
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R ++ + HSL+E+ RR++I+++M+ LQ+L+P C K+ K +LDE I+Y+++LQ QV+
Sbjct: 379 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVD-KISILDEAIDYLKTLQLQVQ 437
Query: 166 FLSM 169
+SM
Sbjct: 438 VMSM 441
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 6/70 (8%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI------TGKAGMLDEIINYV 157
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP +K T + MLDE + Y+
Sbjct: 416 LRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKSLAVIQQTNTSDMLDEAVEYM 475
Query: 158 QSLQRQVEFL 167
+ LQ+QV+ L
Sbjct: 476 KFLQKQVDDL 485
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RAR+G A D S+A RVRRE+ISER+K LQ L+P +K+ ML++ I YVQ L+ Q+
Sbjct: 755 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVD-MVTMLEKAITYVQCLELQI 813
Query: 165 EFL 167
+ L
Sbjct: 814 KML 816
>gi|388520611|gb|AFK48367.1| unknown [Lotus japonicus]
Length = 251
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISE++K L+ L P +K T A MLD + Y++ LQ Q
Sbjct: 167 IRAKRGFATHPRSVAERVRRTRISEKIKKLEGLFPKSDKQTSTADMLDSAVEYIKDLQEQ 226
Query: 164 VEFLS 168
V+ L+
Sbjct: 227 VKTLT 231
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 98 KHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 157
K D R +R + + H+L+E+ RREKI+++M+ L+DL+P CNK+ KA MLD+ I+Y+
Sbjct: 324 KQDREGNRVKRSRNPEVHNLSEKKRREKINKKMRTLKDLIPNCNKV-DKASMLDDAIDYL 382
Query: 158 QSLQRQVE 165
++L+ Q++
Sbjct: 383 KTLKLQLQ 390
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R ++ + HSL+E+ RR++I+++M+ LQ+L+P C K+ K +LDE I+Y+++LQ QV+
Sbjct: 10 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVD-KISILDEAIDYLKTLQLQVQ 68
Query: 166 FLSM 169
+SM
Sbjct: 69 VMSM 72
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+ER RR++I+ERMK LQ+L+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNK-TDKASMLDEAIEYLKLLQHQLQ 62
Query: 166 FL 167
+
Sbjct: 63 VV 64
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RAR+G A D S+A RVRRE+ISER+K LQ L+P +K+ ML++ I+YVQ L+ Q+
Sbjct: 640 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVD-MVTMLEKAISYVQCLEFQI 698
Query: 165 EFL 167
+ L
Sbjct: 699 KML 701
>gi|297745167|emb|CBI39159.3| unnamed protein product [Vitis vinifera]
Length = 410
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRA+RG AT S+AER RR +IS ++K LQDLVP +K T A MLD + +++ LQ +
Sbjct: 332 VRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNE 391
Query: 164 VEFLSMKL 171
V+ L+ +L
Sbjct: 392 VQKLNKEL 399
>gi|359478054|ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vitis vinifera]
Length = 357
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRA+RG AT S+AER RR +IS ++K LQDLVP +K T A MLD + +++ LQ +
Sbjct: 279 VRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNE 338
Query: 164 VEFLSMKL 171
V+ L+ +L
Sbjct: 339 VQKLNKEL 346
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 17/94 (18%)
Query: 91 TKASEVQKHDYIH----------------VRARRGQATDSHSLAERVRREKISERMKYLQ 134
TK + +++HD + V +R +A H+ +ER RR+KI++RMK LQ
Sbjct: 235 TKTTTIEEHDSVSHNGDEEKKKRANGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQ 294
Query: 135 DLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
LVP +K T KA MLDE+I Y++ LQ QV+ ++
Sbjct: 295 KLVPNSSK-TDKASMLDEVIEYLKQLQAQVQMMN 327
>gi|255572912|ref|XP_002527387.1| DNA binding protein, putative [Ricinus communis]
gi|223533239|gb|EEF34994.1| DNA binding protein, putative [Ricinus communis]
Length = 377
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AER RR +IS R+K LQDLVP +K T A MLD + +++ LQ +
Sbjct: 299 IRAKRGCATHPRSIAERERRTRISGRLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQGE 358
Query: 164 VEFLSMKL 171
V+ L +L
Sbjct: 359 VQKLHKEL 366
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+ER RR++I+ERMK LQ+L+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNK-TDKASMLDEAIEYLKLLQHQLQ 62
Query: 166 FL 167
+
Sbjct: 63 VV 64
>gi|42573075|ref|NP_974634.1| transcription factor bHLH23 [Arabidopsis thaliana]
gi|332660144|gb|AEE85544.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 340
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 81 KKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
K R+ V+N E + ++R +A H L+ER RR+KI+E MK LQ+L+P C
Sbjct: 252 KTREETNVENQGTEEARDS----TSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRC 307
Query: 141 NKITGKAGMLDEIINYVQSLQRQVEFLSMKL 171
K T ++ MLD++I YV+SLQ Q++ +++
Sbjct: 308 TK-TDRSSMLDDVIEYVKSLQSQIQGKHLRI 337
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 45/61 (73%), Gaps = 5/61 (8%)
Query: 120 RVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMK----LAAVN 175
++RRE+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LSM AAV
Sbjct: 140 QLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVG 198
Query: 176 P 176
P
Sbjct: 199 P 199
>gi|297828431|ref|XP_002882098.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
gi|297327937|gb|EFH58357.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
Length = 413
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%), Gaps = 6/80 (7%)
Query: 102 IHVRAR-----RGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 156
+H R R R ++T+ H L ER RR++ +++M+ LQD++P C K KA +LDE + Y
Sbjct: 213 VHARIRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDILPNCYK-DDKASLLDEAVKY 271
Query: 157 VQSLQRQVEFLSMKLAAVNP 176
+++LQ QV+ +SM + P
Sbjct: 272 MRTLQHQVQMMSMGNGLIRP 291
>gi|356576919|ref|XP_003556577.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 286
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T A MLD + +++ LQ Q
Sbjct: 208 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQTQ 267
Query: 164 VEFLSMKL 171
V+ L ++
Sbjct: 268 VQKLHKEM 275
>gi|218191124|gb|EEC73551.1| hypothetical protein OsI_07971 [Oryza sativa Indica Group]
Length = 217
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 98 KHDYI--HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIIN 155
+HD + VRA+RG AT S+AER RR +ISE+++ LQ+LVP +K T A MLD +
Sbjct: 133 QHDQVPFKVRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVE 192
Query: 156 YVQSLQRQVEFL 167
+++ LQ Q++ L
Sbjct: 193 HIKGLQSQLQAL 204
>gi|414868827|tpg|DAA47384.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 339
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
+RR ++H+L E+ RR KI+ER K LQ +VPGC+K + +A LD+ I+Y++SLQ QV+
Sbjct: 175 SRRSHHGEAHNLTEKRRRHKINERFKTLQQIVPGCSK-SNQASTLDQTIHYMKSLQHQVQ 233
Query: 166 FLS 168
+S
Sbjct: 234 AMS 236
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RAR+G A D S+A RVRRE+ISER+K LQ L+P +K+ ML++ I+YVQ L+ Q+
Sbjct: 823 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVD-MVTMLEKAISYVQCLEFQI 881
Query: 165 EFL 167
+ L
Sbjct: 882 KML 884
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
V +R +A H+ +ER RR+KI++RMK LQ LVP NK T KA MLDE+I Y++ LQ Q
Sbjct: 287 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNK-TDKASMLDEVIEYLKQLQAQ 345
Query: 164 VE 165
V+
Sbjct: 346 VQ 347
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RRE+I+ER++ LQ+LVP K+ + ML+E +NYV+ LQ Q
Sbjct: 264 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVNYVKFLQLQ 322
Query: 164 VEFLS 168
++ LS
Sbjct: 323 IKLLS 327
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
V +R +A H+ +ER RR+KI++RMK LQ LVP NK T KA MLDE+I Y++ LQ Q
Sbjct: 287 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNK-TDKASMLDEVIEYLKQLQAQ 345
Query: 164 VE 165
V+
Sbjct: 346 VQ 347
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
V +R +A H+ +ER RR+KI++RMK LQ LVP +K T KA MLDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 265
Query: 164 VEFLS 168
V +S
Sbjct: 266 VSMMS 270
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMK 170
H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 149 HNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 203
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
V +R +A H+ +ER RR+KI++RMK LQ LVP +K T KA MLDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 265
Query: 164 VEFLS 168
V +S
Sbjct: 266 VSMMS 270
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
RR +A H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I Y++ LQ QV+
Sbjct: 182 RRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQM 240
Query: 167 LSMK 170
+S++
Sbjct: 241 MSVR 244
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
RR +A H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I Y++ LQ QV+
Sbjct: 220 RRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQM 278
Query: 167 LSMK 170
+S++
Sbjct: 279 MSVR 282
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RAR+G A D S+A RVRRE+ISER+K LQ L+P +K+ ML++ I YVQ L+ Q+
Sbjct: 49 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVD-MVTMLEKAITYVQCLELQI 107
Query: 165 EFL 167
+ L
Sbjct: 108 KML 110
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 110 QATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
+A + H+L+E+ RR +I+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+M
Sbjct: 176 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTM 234
Query: 170 K 170
+
Sbjct: 235 R 235
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 110 QATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
+A + H+L+E+ RR +I+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTM 255
Query: 170 K 170
+
Sbjct: 256 R 256
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RRE+I+ER++ LQ+LVP K+ + ML+E +NYV+ LQ Q
Sbjct: 261 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVNYVKFLQLQ 319
Query: 164 VEFLS 168
++ LS
Sbjct: 320 IKLLS 324
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
+R +A + H+ +ER RR++I+E+M+ LQ+L+P NK T KA MLDE I+Y++ LQ Q++
Sbjct: 730 TKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIDYLKILQLQLQ 788
Query: 166 FLSMKLAAVNP 176
+S++ P
Sbjct: 789 MMSIRTGMTLP 799
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
+R +A + H+ +ER RR++I+E+M+ LQ+L+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 591 TKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQ 649
Query: 166 FLSMKLAAVNPRL 178
+S++ P +
Sbjct: 650 MMSIRTGMTLPPM 662
>gi|302754898|ref|XP_002960873.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
gi|300171812|gb|EFJ38412.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
Length = 638
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RARRG AT S+AERVRR KISE +K L DLVP +K T A ML+ + Y++ L+ +
Sbjct: 557 LRARRGCATHPRSVAERVRRTKISEGIKRLHDLVPNMDKQTNTADMLNHAMEYMKQLKEK 616
Query: 164 VEFLSMKL 171
+E + +L
Sbjct: 617 IEQMKEEL 624
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMK 170
H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 145 HNLSEKRRRGRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 199
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 52/77 (67%), Gaps = 9/77 (11%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
R+R Q H+L ER RR+KI++RM+ L++L+P CNK T KA MLD+ I Y+++L+ Q+
Sbjct: 749 RSRNAQV---HNLCERKRRDKINKRMRILKELIPNCNK-TDKASMLDDAIEYLKTLKLQI 804
Query: 165 E-----FLSMKLAAVNP 176
+ F S ++A V P
Sbjct: 805 QVNFKSFSSYQIAFVRP 821
>gi|224055255|ref|XP_002298446.1| predicted protein [Populus trichocarpa]
gi|222845704|gb|EEE83251.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AERVRR +ISERM+ LQ+L P +K T A LD I ++ LQ+Q
Sbjct: 336 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPDMDKQTSTADKLDLSIELIKDLQKQ 395
Query: 164 VEFLS 168
V+ L+
Sbjct: 396 VKSLA 400
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMK 170
H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+ L+M+
Sbjct: 128 HNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTMR 182
>gi|414876673|tpg|DAA53804.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 310
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 142 KITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN-VDNLFAKEA 190
++ G A ML EIINYVQSLQRQVEF+SMKLA VNP++D N + N+ K++
Sbjct: 183 QVVGNAVMLGEIINYVQSLQRQVEFMSMKLATVNPQVDLNSLPNVLPKDS 232
>gi|414876674|tpg|DAA53805.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 149
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 142 KITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFN-VDNLFAKEA 190
++ G A ML EIINYVQSLQRQVEF+SMKLA VNP++D N + N+ K++
Sbjct: 33 QVVGNAVMLGEIINYVQSLQRQVEFMSMKLATVNPQVDLNSLPNVLPKDS 82
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
V +R +A H+ +ER RR+KI++RMK LQ LVP +K T KA MLDE+I Y++ LQ Q
Sbjct: 209 VSTKRSRAAAIHNQSERKRRDKINQRMKILQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 267
Query: 164 VEFLS 168
V +S
Sbjct: 268 VSMMS 272
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 110 QATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
+A + H+L+E+ RR +I+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTM 255
Query: 170 K 170
+
Sbjct: 256 R 256
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
R +R +A + H+L+ER RR++I+E+M+ LQ+L+P NK T KA MLDE I Y++ LQ Q
Sbjct: 11 TRPKRSRAAEVHNLSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQ 69
Query: 164 VEFLSMKL 171
++ ++L
Sbjct: 70 LQVPKIEL 77
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMK 170
H+L+E+ RR +I+E+MK LQ+L+P NK T KA MLDE I Y++ LQ QV+ LS++
Sbjct: 116 HNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSLR 170
>gi|357511681|ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatula]
gi|355501144|gb|AES82347.1| Transcription factor PIF3 [Medicago truncatula]
Length = 682
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
+++ ++T+ H+L+ER RR++I+ERM+ LQ+L+P CNK KA MLDE I Y++SLQ Q++
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNK-ADKASMLDEAIEYLKSLQLQLQ 483
Query: 166 FLSM 169
+SM
Sbjct: 484 IMSM 487
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RAR+G A D S+A R RRE+IS+R+K LQ+LVP K+ ML++ INYV+ LQ QV
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKV-DLVTMLEKAINYVKFLQLQV 417
Query: 165 EFLS 168
+ L+
Sbjct: 418 KVLT 421
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAV 174
H+L+ER RR+KI+E+++ L++L+P CNK+ KA MLD+ I+Y+++L+ Q++ +SM A
Sbjct: 213 HNLSERKRRDKINEKIRALKELIPNCNKM-DKASMLDDAIDYLKTLKLQLQIMSMGRALC 271
Query: 175 NPRLDF 180
P F
Sbjct: 272 MPLNHF 277
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAV 174
H+L+ER RR+KI+E+++ L++L+P CNK+ KA MLD+ I+Y+++L+ Q++ +SM A
Sbjct: 213 HNLSERKRRDKINEKIRALKELIPNCNKM-DKASMLDDAIDYLKTLKLQLQIMSMGRALC 271
Query: 175 NPRLDF 180
P F
Sbjct: 272 MPLNHF 277
>gi|115459116|ref|NP_001053158.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|113564729|dbj|BAF15072.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|215695534|dbj|BAG90725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195100|gb|EEC77527.1| hypothetical protein OsI_16412 [Oryza sativa Indica Group]
Length = 369
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 98 KHDYI--HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIIN 155
+HD + VRA+RG AT S+AER RR +ISE+++ LQ LVP +K T + MLD ++
Sbjct: 277 QHDQVPFRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVD 336
Query: 156 YVQSLQRQVEFL 167
+++ LQ Q++ L
Sbjct: 337 HIKGLQSQLQTL 348
>gi|222623194|gb|EEE57326.1| hypothetical protein OsJ_07428 [Oryza sativa Japonica Group]
Length = 103
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 98 KHDYI--HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIIN 155
+HD + VRA+RG AT S+AER RR +ISE+++ LQ+LVP +K T A MLD +
Sbjct: 19 QHDQVPFKVRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVE 78
Query: 156 YVQSLQRQVEFL 167
+++ LQ Q++ L
Sbjct: 79 HIKGLQSQLQAL 90
>gi|242084060|ref|XP_002442455.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
gi|241943148|gb|EES16293.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
Length = 155
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
ARR ++H+L E+ RR KI +++K L+ LVPGC+ + +A +LD+ I +++SLQ+Q++
Sbjct: 19 ARRSHPAETHNLTEKRRRRKIDDKLKTLRQLVPGCDDKSNQASILDQTIQHIKSLQQQIQ 78
Query: 166 F----LSMKLAAVNP 176
+S+ A+ P
Sbjct: 79 VQPKAISLGCDAIKP 93
>gi|224131550|ref|XP_002321112.1| predicted protein [Populus trichocarpa]
gi|222861885|gb|EEE99427.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T A ML+ + +++ LQ +
Sbjct: 263 IRAKRGCATHPRSIAERERRTRISGKLKTLQDLVPNMDKQTSYADMLELAVKHIKGLQNE 322
Query: 164 VEFLSMKLAAV 174
VE L +L
Sbjct: 323 VEKLHKELEGC 333
>gi|38345229|emb|CAE01659.2| OSJNBa0084K20.3 [Oryza sativa Japonica Group]
gi|38347437|emb|CAE02480.2| OSJNBa0076N16.1 [Oryza sativa Japonica Group]
gi|222629103|gb|EEE61235.1| hypothetical protein OsJ_15277 [Oryza sativa Japonica Group]
Length = 218
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 98 KHDYI--HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIIN 155
+HD + VRA+RG AT S+AER RR +ISE+++ LQ LVP +K T + MLD ++
Sbjct: 126 QHDQVPFRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVD 185
Query: 156 YVQSLQRQVEFL 167
+++ LQ Q++ L
Sbjct: 186 HIKGLQSQLQTL 197
>gi|87241328|gb|ABD33186.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 689
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 52/70 (74%), Gaps = 6/70 (8%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI------TGKAGMLDEIINYVQS 159
+++ ++T+ H+L+ER RR++I+ERM+ LQ+L+P CNK+ KA MLDE I Y++S
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKVDLFFLQADKASMLDEAIEYLKS 484
Query: 160 LQRQVEFLSM 169
LQ Q++ +SM
Sbjct: 485 LQLQLQIMSM 494
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RRE+I+ER+K LQ+LVP K+ + ML+E ++YV LQ Q
Sbjct: 272 TRATRGAATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVHYVNFLQLQ 330
Query: 164 VEFLS 168
++ LS
Sbjct: 331 IKLLS 335
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RRE+I+ER+K LQ+LVP K+ + ML+E + YV+ LQ Q
Sbjct: 259 ARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVEYVKFLQLQ 317
Query: 164 VEFLS 168
++ LS
Sbjct: 318 IKLLS 322
>gi|297824267|ref|XP_002880016.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
gi|297325855|gb|EFH56275.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 10/143 (6%)
Query: 35 FEASYAISRTSSSPPAVVPEAVDVKGKVSVAALNEKVSA-AVGRESFKKRKADKVQNTKA 93
F+AS + R+ + + P A G S + + + A GR RK + +T
Sbjct: 174 FDASMSQDRSKNIEEKLNPNASSSSGGSSGCSFGKDIKEMACGRSITTDRKRKHIMDTDD 233
Query: 94 SEVQKHDYIHVRA-------RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGK 146
S V D I ++ RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T K
Sbjct: 234 S-VSLSDVIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDK 291
Query: 147 AGMLDEIINYVQSLQRQVEFLSM 169
A +LDE I+Y++SLQ Q++ + M
Sbjct: 292 ASILDEAIDYLKSLQLQLQVMWM 314
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
RA RG ATD SL R RRE+I+ER+K LQ+LVP K+ + ML+E + YV+ LQ
Sbjct: 254 KARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVEYVKFLQL 312
Query: 163 QVEFLS 168
Q++ LS
Sbjct: 313 QIKLLS 318
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RRE+I+ER++ LQ+LVP K+ + ML+E + YV+ LQ Q
Sbjct: 187 TRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQ 245
Query: 164 VEFLS 168
++ LS
Sbjct: 246 IKLLS 250
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
+RR +A + H+ +ER RR++I+E+M+ LQ L+P NK T KA ML+E I Y++SLQ Q++
Sbjct: 356 SRRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNK-TDKASMLEEAIEYLKSLQFQLQ 414
Query: 166 FLSM 169
+ M
Sbjct: 415 VMWM 418
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RA RG ATD SL R RREKI+ER++ LQ+LVP K+ + ML++ I+YV+ LQ Q+
Sbjct: 199 RANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKV-DISTMLEDAIHYVKFLQLQI 257
Query: 165 EFLS 168
+ LS
Sbjct: 258 KLLS 261
>gi|224065030|ref|XP_002301638.1| predicted protein [Populus trichocarpa]
gi|222843364|gb|EEE80911.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T A MLD + +++ LQ +
Sbjct: 77 IRAKRGFATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDFAVQHIKGLQNE 136
Query: 164 VEFLSMKL 171
VE L ++
Sbjct: 137 VEKLHKEM 144
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RRE+I+ER++ LQ+LVP K+ + ML+E + YV+ LQ Q
Sbjct: 187 TRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQ 245
Query: 164 VEFLS 168
++ LS
Sbjct: 246 IKLLS 250
>gi|357504213|ref|XP_003622395.1| BHLH transcription factor [Medicago truncatula]
gi|355497410|gb|AES78613.1| BHLH transcription factor [Medicago truncatula]
Length = 141
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 122 RREKISERMKYLQDLVPGCNK-ITGKAGMLDEIINYVQSLQRQVEFLSMKLAA-VNPRLD 179
RREKISER+K L+DLVP K + GK ML EIINY+QSLQ QVE + + ++ R++
Sbjct: 60 RREKISERIKMLEDLVPRYTKLVIGKTLMLYEIINYIQSLQHQVEIHAYVFSIFLHERIN 119
Query: 180 FNVDNLFAKEAFP 192
F ++ + + FP
Sbjct: 120 FILNMHSSIDCFP 132
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RRE+I+ER+K LQ+LVP K+ + ML+E + YV+ LQ Q
Sbjct: 254 ARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVEYVKFLQLQ 312
Query: 164 VEFLS 168
++ LS
Sbjct: 313 IKLLS 317
>gi|242062246|ref|XP_002452412.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
gi|241932243|gb|EES05388.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
Length = 338
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRA+RG AT S+AER RR +ISE+++ LQDLVP +K T A MLD + +++ LQ +
Sbjct: 262 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTADMLDLAVEHIKGLQSE 321
Query: 164 VEFL 167
++ L
Sbjct: 322 LQAL 325
>gi|449521074|ref|XP_004167556.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 356
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AER RR +IS ++K LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 292 IRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQ 351
Query: 164 VEFL 167
++ L
Sbjct: 352 IQVL 355
>gi|334184893|ref|NP_001189738.1| transcription factor bHLH129 [Arabidopsis thaliana]
gi|330255120|gb|AEC10214.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 309
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA+RG AT S+AER RR +IS ++K LQ+LVP +K T A MLD + +++ LQ Q
Sbjct: 231 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 290
Query: 164 VEFL 167
VE L
Sbjct: 291 VESL 294
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RREKI+ER++ LQ+LVP K+ + ML++ I+YV+ LQ Q
Sbjct: 184 ARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKV-DISTMLEDAIHYVKFLQLQ 242
Query: 164 VEFLS 168
++ LS
Sbjct: 243 IKLLS 247
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
R+ RG ATD S+ R RREKI+ER+K LQ+LVP K+ + ML+E + YV+ LQ Q+
Sbjct: 247 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVD-ISTMLEEAVQYVKFLQLQI 305
Query: 165 EFLS---------MKLAAVNPRLDFNV 182
+ LS + +N LD N+
Sbjct: 306 KLLSSDDLWMYAPIAFNGMNIGLDLNL 332
>gi|77556977|gb|ABA99773.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 266
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
R A +H+L E+ RR KI+ER + LQ LVPGC+ + +A LD+ I Y++SLQ Q+E
Sbjct: 79 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEA 138
Query: 167 LS 168
S
Sbjct: 139 TS 140
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 21/140 (15%)
Query: 31 FGPGFEASY--AISRTSSSPPAVVPEAVDVKGKVSVAALNEKVSAAVGRESFKKRKADKV 88
FG GF ++ ++ TSS+ VD VS S VG + + +K K
Sbjct: 207 FGVGFTSTSINSLENTSSAKHCTKTTTVDDHDSVSH-------SKPVGEDQDEGKK--KR 257
Query: 89 QNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 148
N K+S V +R +A H+ +ER RR+KI++RMK LQ LVP +K + KA
Sbjct: 258 ANGKSS---------VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-SDKAS 307
Query: 149 MLDEIINYVQSLQRQVEFLS 168
MLDE+I Y++ LQ Q++ ++
Sbjct: 308 MLDEVIEYLKQLQAQLQMIN 327
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA +G ATD SL R RREKI+ER+K LQ+LVP K+ + ML+E ++YV+ LQ Q
Sbjct: 167 TRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 225
Query: 164 VEFLS 168
++ LS
Sbjct: 226 IKLLS 230
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RRE+I+ER++ LQ+LVP K+ + ML+E ++YV+ LQ Q
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 345
Query: 164 VEFLS 168
++ LS
Sbjct: 346 IKLLS 350
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+L+E+ RR +I+E+MK LQ+L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 134 SKRTRAAEVHNLSEKRRRSRINEKMKALQNLIPNSSK-TDKASMLDEAIEYLKLLQLQVQ 192
Query: 166 FLSMKLAAV 174
LS++ +
Sbjct: 193 GLSVRFLEI 201
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RRE+I+ER++ LQ+LVP K+ + ML+E ++YV+ LQ Q
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 345
Query: 164 VEFLS 168
++ LS
Sbjct: 346 IKLLS 350
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA +G ATD SL R RREKI+ER+K LQ+LVP K+ + ML+E ++YV+ LQ Q
Sbjct: 167 TRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 225
Query: 164 VEFLS 168
++ LS
Sbjct: 226 IKLLS 230
>gi|357445143|ref|XP_003592849.1| Transcription factor bHLH128 [Medicago truncatula]
gi|355481897|gb|AES63100.1| Transcription factor bHLH128 [Medicago truncatula]
Length = 343
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 265 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQTQ 324
Query: 164 VEFLSMKL 171
V+ L L
Sbjct: 325 VQKLHEDL 332
>gi|297828011|ref|XP_002881888.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
gi|297327727|gb|EFH58147.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA+RG AT S+AER RR +IS ++K LQ+LVP +K T A MLD + +++ LQ Q
Sbjct: 233 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 292
Query: 164 VE 165
VE
Sbjct: 293 VE 294
>gi|145360933|ref|NP_181843.2| transcription factor bHLH129 [Arabidopsis thaliana]
gi|218563526|sp|Q9ZW81.2|BH129_ARATH RecName: Full=Transcription factor bHLH129; AltName: Full=Basic
helix-loop-helix protein 129; Short=AtbHLH129;
Short=bHLH 129; AltName: Full=Transcription factor EN
73; AltName: Full=bHLH transcription factor bHLH129
gi|330255119|gb|AEC10213.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 297
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA+RG AT S+AER RR +IS ++K LQ+LVP +K T A MLD + +++ LQ Q
Sbjct: 233 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 292
Query: 164 VE 165
VE
Sbjct: 293 VE 294
>gi|3763923|gb|AAC64303.1| hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA+RG AT S+AER RR +IS ++K LQ+LVP +K T A MLD + +++ LQ Q
Sbjct: 231 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 290
Query: 164 VE 165
VE
Sbjct: 291 VE 292
>gi|357142794|ref|XP_003572696.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 317
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRA+RG AT S+AER RR +ISE+++ LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 241 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTSDMLDLAVEHIKGLQSQ 300
Query: 164 VEFL 167
++ +
Sbjct: 301 LQAM 304
>gi|21554238|gb|AAM63313.1| Contains similarity to bHLH transcription factor GBOF-1 from Tulipa
gesneriana gb|AF185269 [Arabidopsis thaliana]
Length = 362
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 342
Query: 164 VEFL 167
++ L
Sbjct: 343 LQNL 346
>gi|18390573|ref|NP_563749.1| transcription factor bHLH128 [Arabidopsis thaliana]
gi|75299737|sp|Q8H102.1|BH128_ARATH RecName: Full=Transcription factor bHLH128; AltName: Full=Basic
helix-loop-helix protein 128; Short=AtbHLH128;
Short=bHLH 128; AltName: Full=Transcription factor EN
74; AltName: Full=bHLH transcription factor bHLH128
gi|24030386|gb|AAN41354.1| unknown protein [Arabidopsis thaliana]
gi|332189775|gb|AEE27896.1| transcription factor bHLH128 [Arabidopsis thaliana]
Length = 362
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 342
Query: 164 VEFL 167
++ L
Sbjct: 343 LQNL 346
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RRE+I+ER++ LQ+LVP K+ + ML+E ++YV+ LQ Q
Sbjct: 266 TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 324
Query: 164 VEFLS 168
++ LS
Sbjct: 325 IKLLS 329
>gi|312282787|dbj|BAJ34259.1| unnamed protein product [Thellungiella halophila]
Length = 353
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 274 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 333
Query: 164 VEFL 167
++ L
Sbjct: 334 LQNL 337
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS-MKLAA 173
H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+ M
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
Query: 174 VNP 176
+NP
Sbjct: 157 LNP 159
>gi|297820750|ref|XP_002878258.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
gi|297324096|gb|EFH54517.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
Length = 439
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 250 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQMQLQ 308
Query: 166 FLSM 169
+ M
Sbjct: 309 VMWM 312
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RRE+I+ER++ LQ+LVP K+ + ML+E ++YV+ LQ Q
Sbjct: 265 TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 323
Query: 164 VEFLS 168
++ LS
Sbjct: 324 IKLLS 328
>gi|218187189|gb|EEC69616.1| hypothetical protein OsI_38990 [Oryza sativa Indica Group]
Length = 379
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEF 166
R A +H+L E+ RR KI+ER + LQ LVPGC+ + +A LD+ I Y++SLQ Q+E
Sbjct: 192 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEA 251
Query: 167 LS 168
S
Sbjct: 252 TS 253
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RRE+I+ER++ LQ+LVP K+ + ML+E ++YV+ LQ Q
Sbjct: 93 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 151
Query: 164 VEFLS 168
++ LS
Sbjct: 152 IKLLS 156
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS-MKLAA 173
H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+ M
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
Query: 174 VNP 176
+NP
Sbjct: 157 LNP 159
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RRE+I+ER++ LQ+LVP K+ + ML+E ++YV+ LQ Q
Sbjct: 263 TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 321
Query: 164 VEFLS 168
++ LS
Sbjct: 322 IKLLS 326
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS-MKLAA 173
H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+ M
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
Query: 174 VNP 176
+NP
Sbjct: 157 LNP 159
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RRE+I+ER++ LQ+LVP K+ + ML+E ++YV+ LQ Q
Sbjct: 266 TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 324
Query: 164 VEFLS 168
++ LS
Sbjct: 325 IKLLS 329
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
++R +A + H+ +ER RR++I+E+M+ LQ L+P NK T KA ML+E I Y++SLQ Q++
Sbjct: 356 SKRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNK-TDKASMLEEAIEYLKSLQFQLQ 414
Query: 166 FLSM 169
+ M
Sbjct: 415 VMWM 418
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS-MKLAA 173
H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+ M
Sbjct: 97 HNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYMKQLQLQVQTLAVMNGLG 155
Query: 174 VNP 176
+NP
Sbjct: 156 LNP 158
>gi|297843372|ref|XP_002889567.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335409|gb|EFH65826.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 357
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 278 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 337
Query: 164 VEFL 167
++ L
Sbjct: 338 LQNL 341
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
R+ RG ATD SL R RRE+I+ER+K LQ+LVP K+ + ML+E + YV+ LQ Q+
Sbjct: 225 RSSRGPATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
Query: 165 EFLS 168
+ LS
Sbjct: 284 KLLS 287
>gi|449468734|ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 370
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RA+RG AT S+AER RR +IS ++K LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 292 IRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQ 351
Query: 164 VEFLSMKL 171
++ L+ ++
Sbjct: 352 IQKLNKEV 359
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RA+RG ATD S+ R RRE+I+ER+K LQ LVP K+ ML+E I+YV+ LQ QV
Sbjct: 212 RAKRGSATDPQSVYARHRRERINERLKTLQHLVPNGAKV-DIVTMLEEAIHYVKFLQLQV 270
Query: 165 EFLS 168
LS
Sbjct: 271 NMLS 274
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
H+ +ER RR++I+E++K LQ+L+P C K T K MLDE I+Y++SLQ Q++ L M
Sbjct: 18 HNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQMLVM 71
>gi|356536570|ref|XP_003536810.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 283
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Query: 109 GQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
GQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ QV+ LS
Sbjct: 127 GQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLS 185
Query: 169 M 169
M
Sbjct: 186 M 186
>gi|302767438|ref|XP_002967139.1| hypothetical protein SELMODRAFT_86848 [Selaginella moellendorffii]
gi|300165130|gb|EFJ31738.1| hypothetical protein SELMODRAFT_86848 [Selaginella moellendorffii]
Length = 110
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+RARRG AT S+AERVRR KISE +K L DLVP +K T A ML+ + Y++ L+ +
Sbjct: 44 LRARRGCATHPRSVAERVRRTKISEGIKRLHDLVPNMDKQTNTADMLNHAMEYMKQLKEK 103
Query: 164 VE 165
+E
Sbjct: 104 IE 105
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RAR+G A D S+A R RRE+IS+R+K LQ+LVP K+ ML++ INYV+ LQ QV
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKV-DLVTMLEKAINYVKFLQLQV 417
Query: 165 E 165
+
Sbjct: 418 K 418
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
R +RG ATD S+ R RREKI+ER++ LQ L+P K+ MLDE ++YVQ L+RQV
Sbjct: 448 RVQRGSATDPQSVHARARREKIAERLRKLQHLIPNGGKV-DIVTMLDEAVHYVQFLKRQV 506
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RRE+I+ER++ LQ LVP K+ + ML+E + YV+ LQ Q
Sbjct: 264 TRASRGAATDPQSLYARKRRERINERLRILQTLVPNGTKVD-ISTMLEEAVQYVKFLQLQ 322
Query: 164 VEFLS 168
++ LS
Sbjct: 323 IKLLS 327
>gi|339716186|gb|AEJ88332.1| putative MYC protein, partial [Tamarix hispida]
Length = 181
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 38/58 (65%), Gaps = 6/58 (10%)
Query: 68 NEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREK 125
N KV A +G + +QNTK+ DYIHVRARRGQATDSHSLAER RREK
Sbjct: 130 NSKVDAELGT------GKETMQNTKSPPDPSKDYIHVRARRGQATDSHSLAERARREK 181
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS-MKLAA 173
H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+ M
Sbjct: 94 HNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 152
Query: 174 VNP 176
+NP
Sbjct: 153 LNP 155
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 70/149 (46%), Gaps = 16/149 (10%)
Query: 19 LGKIVAPAAGYGFGPGFEASYAISRTSSSPPAVVPEAVDVKGKVSVAALNEKVSAAVGRE 78
L I P G PG + +SR S + D K A + A+ R
Sbjct: 338 LQSIFLPGQGSSRKPGIKTVEEMSRRCS----LQDNNRDAKRHKGSTAQRTRFGASSKRG 393
Query: 79 SFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVP 138
+ KR+ N K RA++G A D S+A R RRE+IS+R+K LQ+L+P
Sbjct: 394 NSHKREPALNTNLKP-----------RAKQGCANDPQSIAARQRRERISDRLKILQELIP 442
Query: 139 GCNKITGKAGMLDEIINYVQSLQRQVEFL 167
+K+ ML++ INYV+ LQ QV+ L
Sbjct: 443 NGSKVD-LVTMLEKAINYVKFLQLQVKVL 470
>gi|312283297|dbj|BAJ34514.1| unnamed protein product [Thellungiella halophila]
Length = 448
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T KA +LDE I+Y++SLQ Q++
Sbjct: 256 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQMQLQ 314
Query: 166 FLSM 169
+ M
Sbjct: 315 VMWM 318
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS-MKLAA 173
H+L+E+ RR KI+E+MK LQ L+P NK T KA MLDE I Y++ LQ QV+ L+ M
Sbjct: 97 HNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 155
Query: 174 VNP 176
+NP
Sbjct: 156 LNP 158
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 103 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 162
+ RA RG ATD SL R RRE+I+ER++ LQ LVP K+ + ML+E YV+ LQ
Sbjct: 189 YTRASRGAATDPQSLYARKRRERINERLRILQKLVPNGTKV-DISTMLEEAAQYVKFLQL 247
Query: 163 QVEFLS 168
Q++ LS
Sbjct: 248 QIKLLS 253
>gi|356506557|ref|XP_003522046.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 397
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 95 EVQKHDYIHVRARRGQATDS--------HSLAERVRREKISERMKYLQDLVPGCNKITGK 146
EV DY + R ++ H +ER RR+KI++RMK LQ LVP +K T K
Sbjct: 211 EVPDEDYKATKVDRSSGSNKRIKANSVVHKQSERRRRDKINQRMKELQKLVPNSSK-TDK 269
Query: 147 AGMLDEIINYVQSLQRQVEFLS-MKL 171
A MLDE+I Y++ LQ QV+ ++ MK+
Sbjct: 270 ASMLDEVIQYMKQLQAQVQMMNWMKM 295
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RRE+I+ER++ LQ+LVP K+ + ML+E +NYV+ LQ Q
Sbjct: 274 TRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTKV-DISTMLEEAVNYVKFLQTQ 332
Query: 164 VEFLSM 169
++ ++
Sbjct: 333 IKVCTI 338
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RA RG ATD SL R RRE+I+ER++ LQ LVP K+ + ML+E ++YV+ LQ Q+
Sbjct: 238 RASRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 296
Query: 165 EFLS 168
+ LS
Sbjct: 297 KLLS 300
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 122 RREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
RR++I+E+M+ LQ+L+P CNKI KA MLDE I Y+++LQ QV+ +SM
Sbjct: 12 RRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQMMSM 58
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD S+ R RRE+I+ER++ LQ+LVP K+ + ML+E ++YV+ LQ Q
Sbjct: 207 TRASRGAATDPQSIYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 265
Query: 164 VEFLS 168
++ LS
Sbjct: 266 IKLLS 270
>gi|242076304|ref|XP_002448088.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
gi|241939271|gb|EES12416.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
Length = 226
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K T A MLD +++++ LQ +
Sbjct: 146 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQSE 205
Query: 164 VEFL 167
++ L
Sbjct: 206 LQAL 209
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RRE+I+ER++ LQ LVP K+ + ML+E ++YV+ LQ Q
Sbjct: 237 TRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKV-DISTMLEEAVHYVKFLQLQ 295
Query: 164 VEFLS 168
++ LS
Sbjct: 296 IKLLS 300
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
H+ +ER RR++I+E++K LQ+L+P C K T K MLDE I+Y++SLQ Q++ L M
Sbjct: 22 HNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQIQLQMLVM 75
>gi|242084062|ref|XP_002442456.1| hypothetical protein SORBIDRAFT_08g020280 [Sorghum bicolor]
gi|241943149|gb|EES16294.1| hypothetical protein SORBIDRAFT_08g020280 [Sorghum bicolor]
Length = 219
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 9/112 (8%)
Query: 54 EAVDVKGKVS-VAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVRARRGQAT 112
+AV V G+ + V ++ V + G ES K + + T ++ K + H A
Sbjct: 113 DAVVVAGRRAWVVDDDQMVPSGKGLESSSDHKLQEKRKTSSTGRGKRSHHHAEA------ 166
Query: 113 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
HSL E+ RR KI E++K LQ LVPGC + +A LD+ I Y++SLQ+ +
Sbjct: 167 --HSLTEKRRRLKIKEKLKTLQQLVPGCPNNSNQASTLDQTIRYIKSLQQHI 216
>gi|357143431|ref|XP_003572919.1| PREDICTED: transcription factor SPATULA-like [Brachypodium
distachyon]
Length = 312
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAV 174
H+L+E+ RR +I+E+MK LQ LVP +K T KA MLD+ I Y++ LQ QV+ LSM+
Sbjct: 70 HNLSEKRRRCRINEKMKALQSLVPNSSK-TDKASMLDDAIEYLKQLQLQVQMLSMRNGLY 128
Query: 175 NPRLDFNV 182
P+++ V
Sbjct: 129 LPQVNLPV 136
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RA RG ATD SL R RRE+I+ER++ LQ LVP K+ + ML+E + YV+ LQ Q+
Sbjct: 185 RASRGSATDPQSLYARKRRERINERLRILQTLVPNGTKV-DISTMLEEAVQYVKFLQLQI 243
Query: 165 EFLS 168
+ LS
Sbjct: 244 KLLS 247
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAV 174
HSL+ER RR+KI+++M+ LQ L+P +K+ KA MLD+ I Y+++LQ Q++ +SM+ +
Sbjct: 385 HSLSERKRRDKINKKMRALQALIPNSDKV-DKASMLDKAIEYLKTLQLQLQMMSMRGSCY 443
Query: 175 NP 176
P
Sbjct: 444 MP 445
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RRE+I+ER++ LQ LVP K+ + ML+E ++YV+ LQ Q
Sbjct: 237 TRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKV-DISTMLEEAVHYVKFLQLQ 295
Query: 164 VEFLS 168
++ LS
Sbjct: 296 IKLLS 300
>gi|291506702|gb|ADE08783.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506704|gb|ADE08784.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506706|gb|ADE08785.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506708|gb|ADE08786.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506710|gb|ADE08787.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506712|gb|ADE08788.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 430
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 64/101 (63%), Gaps = 9/101 (8%)
Query: 74 AVGRESFKKRKADKVQNTKASEVQKHDYIHVRA-------RRGQATDSHSLAERVRREKI 126
A GR RK ++ +T S V D I ++ RR +A + H+L+ER RR++I
Sbjct: 215 ASGRCITTDRKRKRINDTDES-VSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRI 273
Query: 127 SERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
+ERMK LQ+L+P C+K T KA +LDE I+Y++SLQ Q++ +
Sbjct: 274 NERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQVM 313
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RA RG ATD SL R RRE+I+ER++ LQ+LVP K+ + ML+E + YV+ LQ Q+
Sbjct: 238 RAGRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVQYVKFLQLQI 296
Query: 165 EFLS 168
+ LS
Sbjct: 297 KLLS 300
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RA RG ATD SL R RRE+I+ER++ LQ LVP K+ + ML+E + YV+ LQ Q+
Sbjct: 248 RASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKV-DISTMLEEAVQYVKFLQLQI 306
Query: 165 EFLS 168
+ LS
Sbjct: 307 KLLS 310
>gi|413918730|gb|AFW58662.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 223
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K T A MLD +++++ LQ +
Sbjct: 143 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQNE 202
Query: 164 VEFL 167
++ L
Sbjct: 203 LQAL 206
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 9/141 (6%)
Query: 33 PGFEASYAISRTSSSPPAVVPEAVDVKG-----KVSVAALNEKVSAAVGRESFKKRKADK 87
P +Y PP +A+D G S ++ K SA + K +K
Sbjct: 154 PPLYVNYLTDANRRMPPLGSSQALDQPGAPRIISNSCSSPTRKRSADDQNTTNALSKREK 213
Query: 88 VQNTKASEVQK---HDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIT 144
+ ++ AS + + R+R+G A D S+A R RRE+IS+R+K LQDLVP +K+
Sbjct: 214 IDSSPASSCCTTALNTNLKPRSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSKV- 272
Query: 145 GKAGMLDEIINYVQSLQRQVE 165
ML++ INYV+ +Q Q++
Sbjct: 273 DLVTMLEKAINYVKFMQLQLQ 293
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLD+ I Y++ LQ QV
Sbjct: 27 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQLQLQV 85
Query: 165 EFL 167
+ +
Sbjct: 86 QMI 88
>gi|30689224|ref|NP_850381.1| transcription factor PIF4 [Arabidopsis thaliana]
gi|330255104|gb|AEC10198.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 428
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 64/101 (63%), Gaps = 9/101 (8%)
Query: 74 AVGRESFKKRKADKVQNTKASEVQKHDYIHVRA-------RRGQATDSHSLAERVRREKI 126
A GR RK ++ +T S V D I ++ RR +A + H+L+ER RR++I
Sbjct: 215 ASGRCITTDRKRKRINHTDES-VSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRI 273
Query: 127 SERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
+ERMK LQ+L+P C+K T KA +LDE I+Y++SLQ Q++ +
Sbjct: 274 NERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQVM 313
>gi|222424750|dbj|BAH20328.1| AT2G43010 [Arabidopsis thaliana]
Length = 409
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 64/101 (63%), Gaps = 9/101 (8%)
Query: 74 AVGRESFKKRKADKVQNTKASEVQKHDYIHVRA-------RRGQATDSHSLAERVRREKI 126
A GR RK ++ +T S V D I ++ RR +A + H+L+ER RR++I
Sbjct: 194 ASGRCITTDRKRKRINHTDES-VSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRI 252
Query: 127 SERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
+ERMK LQ+L+P C+K T KA +LDE I+Y++SLQ Q++ +
Sbjct: 253 NERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQVM 292
>gi|20127070|gb|AAM10954.1|AF488598_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 442
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ T KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQ 310
Query: 166 FLSM 169
+ M
Sbjct: 311 VMWM 314
>gi|30694919|ref|NP_851021.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|7529749|emb|CAB86934.1| putative protein [Arabidopsis thaliana]
gi|332646347|gb|AEE79868.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 442
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ T KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQ 310
Query: 166 FLSM 169
+ M
Sbjct: 311 VMWM 314
>gi|30689218|ref|NP_565991.2| transcription factor PIF4 [Arabidopsis thaliana]
gi|28201855|sp|Q8W2F3.1|PIF4_ARATH RecName: Full=Transcription factor PIF4; AltName: Full=Basic
helix-loop-helix protein 9; Short=AtbHLH9; Short=bHLH 9;
AltName: Full=Phytochrome-interacting factor 4; AltName:
Full=Short under red-light 2; AltName:
Full=Transcription factor EN 102; AltName: Full=bHLH
transcription factor bHLH009
gi|18026966|gb|AAL55716.1|AF251694_1 putative transcription factor BHLH9 [Arabidopsis thaliana]
gi|21068661|emb|CAD29449.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|222423257|dbj|BAH19605.1| AT2G43010 [Arabidopsis thaliana]
gi|225898591|dbj|BAH30426.1| hypothetical protein [Arabidopsis thaliana]
gi|291506714|gb|ADE08789.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506716|gb|ADE08790.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506718|gb|ADE08791.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506720|gb|ADE08792.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506722|gb|ADE08793.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506724|gb|ADE08794.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506726|gb|ADE08795.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506728|gb|ADE08796.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|330255103|gb|AEC10197.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 430
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 64/101 (63%), Gaps = 9/101 (8%)
Query: 74 AVGRESFKKRKADKVQNTKASEVQKHDYIHVRA-------RRGQATDSHSLAERVRREKI 126
A GR RK ++ +T S V D I ++ RR +A + H+L+ER RR++I
Sbjct: 215 ASGRCITTDRKRKRINHTDES-VSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRI 273
Query: 127 SERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
+ERMK LQ+L+P C+K T KA +LDE I+Y++SLQ Q++ +
Sbjct: 274 NERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQVM 313
>gi|30694924|ref|NP_191465.3| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315658|ref|NP_001030889.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315685|ref|NP_001030890.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|75297820|sp|Q84LH8.1|PIF5_ARATH RecName: Full=Transcription factor PIF5; AltName: Full=Basic
helix-loop-helix protein 65; Short=AtbHLH65; Short=bHLH
65; AltName: Full=Phytochrome interacting factor-like 6;
AltName: Full=Phytochrome-interacting factor 5; AltName:
Full=Transcription factor EN 103; AltName: Full=bHLH
transcription factor bHLH065
gi|28372349|dbj|BAC56978.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|222424174|dbj|BAH20046.1| AT3G59060 [Arabidopsis thaliana]
gi|225898729|dbj|BAH30495.1| hypothetical protein [Arabidopsis thaliana]
gi|332646348|gb|AEE79869.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646349|gb|AEE79870.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646350|gb|AEE79871.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 444
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ T KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQ 310
Query: 166 FLSM 169
+ M
Sbjct: 311 VMWM 314
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 10/88 (11%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG +TD SL R RRE+I+ER+K LQ LVP K+ + ML+E ++YV+ LQ Q
Sbjct: 215 ARAARGASTDPQSLYARKRRERINERLKTLQTLVPNGTKVD-MSTMLEEAVHYVKFLQLQ 273
Query: 164 VEFLS---------MKLAAVNPRLDFNV 182
++ LS + +N LD N+
Sbjct: 274 IKVLSSDDMWMYAPLAYNGMNIGLDLNM 301
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA +G ATD SL R RRE+I+ER++ LQ+LVP K+ + ML+E + YV+ LQ Q
Sbjct: 224 TRASKGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVQYVKFLQLQ 282
Query: 164 VEFLS 168
++ LS
Sbjct: 283 IKLLS 287
>gi|449463597|ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
gi|449505798|ref|XP_004162571.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
Length = 550
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
+RR +A + H+L+ER RRE+I+E+MK LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 347 SRRTRAAEVHNLSERRRRERINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 405
Query: 166 FLSM 169
+ M
Sbjct: 406 VMWM 409
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
A+R +A + H+ +ER RR++I+E+M+ LQ+L+P NK T KA MLDE I Y++ LQ Q++
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQ 77
Query: 166 FLSM 169
++
Sbjct: 78 VCAV 81
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RRE+I+ER++ LQ+LVP K+ + ML+E YV+ LQ Q
Sbjct: 196 TRASRGGATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAAQYVKFLQLQ 254
Query: 164 VEFLS 168
++ LS
Sbjct: 255 IKLLS 259
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 81 KKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 140
K+ K D + + + R+R+G A D S+A R RRE+IS+R+K LQDLVP
Sbjct: 210 KREKIDSSPASSCCTTALNTNLKPRSRQGTANDPQSIAARQRRERISQRLKILQDLVPNG 269
Query: 141 NKITGKAGMLDEIINYVQSLQRQVE 165
+K+ ML++ INYV+ +Q Q++
Sbjct: 270 SKV-DLVTMLEKAINYVKFMQLQLQ 293
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 12/119 (10%)
Query: 60 GKVSVAALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIHVR-----------ARR 108
G +V ++ + S K+ K Q T+ K H R A++
Sbjct: 353 GIKTVEEMSRRCSLQENNRDAKRHKGSTAQRTRFGASSKRGNSHKREPALNTNLKPRAKQ 412
Query: 109 GQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
G A D S+A R RRE+IS+R+K LQ+L+P +K+ ML++ INYV+ LQ QV+ L
Sbjct: 413 GCANDPQSIAARQRRERISDRLKILQELIPNGSKVD-LVTMLEKAINYVKFLQLQVKVL 470
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RRE+I+ER++ LQ LVP K+ + ML+E + YV+ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKV-DISTMLEEAVQYVKFLQLQ 295
Query: 164 VEFLS 168
++ LS
Sbjct: 296 IKLLS 300
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RRE+I+ER++ LQ LVP K+ + ML+E + YV+ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKV-DISTMLEEAVQYVKFLQLQ 295
Query: 164 VEFLS 168
++ LS
Sbjct: 296 IKLLS 300
>gi|255561634|ref|XP_002521827.1| DNA binding protein, putative [Ricinus communis]
gi|223539040|gb|EEF40637.1| DNA binding protein, putative [Ricinus communis]
Length = 284
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 42/58 (72%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQ 161
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP +K T A MLDE + ++++
Sbjct: 192 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVGNSRNIK 249
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 85 ADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIT 144
A K ++K SEV RA RG ATD SL R RRE+I+ER+K LQ +VP K+
Sbjct: 252 ASKDSDSKVSEVLSSSG-KTRASRGAATDPQSLYARKRRERINERLKILQHIVPNGTKV- 309
Query: 145 GKAGMLDEIINYVQSLQRQVE 165
+ ML+E ++YV+ LQ Q++
Sbjct: 310 DISTMLEEAVHYVKFLQLQIK 330
>gi|413932893|gb|AFW67444.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 387
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 100 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
D +HV R+G D RR++I E+M+ LQ+L+P CNK T KA +LDE I Y++S
Sbjct: 179 DSVHVHKRKGMCRDESDSRSERRRDRIKEKMRALQELIPHCNK-TDKASILDETIEYLKS 237
Query: 160 LQRQVEFLSMKLAAV 174
LQ QV+ + M V
Sbjct: 238 LQMQVQIMWMTSGMV 252
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA RG ATD SL R RRE+I+ER++ LQ LVP K+ + ML+E + YV+ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVH-ISTMLEEAVQYVKFLQLQ 295
Query: 164 VEFLS 168
++ LS
Sbjct: 296 IKLLS 300
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 111 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
+ D S+A R RRE+ISERM+ LQ LVPG K+ A MLDE I+YV+ L++QV+ L
Sbjct: 164 SKDPQSVAARHRRERISERMRILQRLVPGGTKM-DTASMLDEAIHYVKFLKKQVQSL 219
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RA G ATD SL R RRE+I+ER++ LQ+LVP K+ + ML+E + YV+ LQ Q+
Sbjct: 265 RATTGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 323
Query: 165 EFLS 168
+ LS
Sbjct: 324 KLLS 327
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 113 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
D S+A R+RRE+ISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 118 DPQSIAARLRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
>gi|242084070|ref|XP_002442460.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
gi|241943153|gb|EES16298.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
Length = 373
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 122 RREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAA 173
RR KI+ER+K LQ LVPGC+K + +A LD+ I+Y++SLQ QV+ +S+ LA+
Sbjct: 225 RRHKINERLKTLQQLVPGCSK-SNQASTLDQTIHYMKSLQHQVQAMSVGLAS 275
>gi|218184992|gb|EEC67419.1| hypothetical protein OsI_34609 [Oryza sativa Indica Group]
Length = 465
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+ +R +A H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ LQ Q
Sbjct: 269 ISTKRSRAAAIHNESERKRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIDYLKQLQAQ 327
Query: 164 VEF 166
V+
Sbjct: 328 VQV 330
>gi|297734539|emb|CBI16590.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
H+ +ER RR+KI++RMK LQ LVP +K T KA MLDE+I Y++ LQ QV+
Sbjct: 33 HNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQ 82
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
RA +G ATD SL R RREKI+ER+K LQ+LVP K+ + ML+E ++YV+ LQ Q
Sbjct: 167 TRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 225
Query: 164 VE 165
++
Sbjct: 226 IK 227
>gi|359489230|ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 465
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 115 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
H+ +ER RR+KI++RMK LQ LVP +K T KA MLDE+I Y++ LQ QV+
Sbjct: 287 HNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQ 336
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 109 GQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
G ATD S+ R RREKI+ER+K LQ+LVP K+ MLDE I+YV+ LQ QVE L
Sbjct: 1 GSATDPQSVYARHRREKINERLKSLQNLVPNGAKVD-IVTMLDEAIHYVKFLQNQVELL 58
>gi|297830832|ref|XP_002883298.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329138|gb|EFH59557.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Query: 111 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMK 170
+TD ++A R RRE+ISE+++ LQ LVPG K+ A MLDE NY++ L+ QV+
Sbjct: 278 STDPQTVAARQRRERISEKIRVLQTLVPGGTKM-DTASMLDEAANYLKFLRAQVK----A 332
Query: 171 LAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAA 212
L + P+LD + + +FP+ +F + +++ HP
Sbjct: 333 LENLRPKLDQTNLSFSSAPSFPLFHPSFLPLQNPNQIHHPGC 374
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RA+RG ATD S+ R RRE+I+ER++ LQ LVP K+ ML+E INYV+ LQ Q+
Sbjct: 238 RAKRGSATDPQSIYARQRRERINERLRALQGLVPNGAKV-DIVTMLEEAINYVKFLQLQL 296
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 111 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
+ D S+A R RRE+ISER+K LQ LVPG K+ A MLDE I+YV+ L++QV+ L
Sbjct: 137 SKDPQSVAARHRRERISERIKILQRLVPGGTKM-DTASMLDEAIHYVKFLKKQVQTL 192
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 109 GQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
G ATD S+ R RREKI+ER+K LQ+LVP K+ MLDE I+YV+ LQ QVE L
Sbjct: 1 GSATDPQSVYARHRREKINERLKNLQNLVPNGAKV-DIVTMLDEAIHYVKFLQTQVELL 58
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RA RG AT+ SL R RRE+I+ER++ LQ+LVP K+ + ML+E YV+ LQ Q+
Sbjct: 195 RASRGAATEPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAAQYVKFLQLQI 253
Query: 165 EFLS 168
+ LS
Sbjct: 254 KLLS 257
>gi|168039475|ref|XP_001772223.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676554|gb|EDQ63036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
A+R +A + H+ +ER RR++I+E+M+ LQ+L+P NK T KA ML+E I Y++ LQ Q++
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLEEAIEYLKMLQLQLQ 77
Query: 166 F 166
Sbjct: 78 V 78
>gi|15232534|ref|NP_188770.1| transcription factor bHLH87 [Arabidopsis thaliana]
gi|75303373|sp|Q8S3D2.1|BH087_ARATH RecName: Full=Transcription factor bHLH87; AltName: Full=Basic
helix-loop-helix protein 87; Short=AtbHLH87; Short=bHLH
87; AltName: Full=Transcription factor EN 121; AltName:
Full=bHLH transcription factor bHLH087
gi|20127095|gb|AAM10960.1|AF488617_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|56382001|gb|AAV85719.1| At3g21330 [Arabidopsis thaliana]
gi|332642972|gb|AEE76493.1| transcription factor bHLH87 [Arabidopsis thaliana]
Length = 373
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 6/101 (5%)
Query: 111 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMK 170
+TD ++A R RRE+ISE+++ LQ LVPG K+ A MLDE NY++ L+ QV+
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTKMD-TASMLDEAANYLKFLRAQVK----A 330
Query: 171 LAAVNPRLD-FNVDNLFAKEAFPVCPSNFPTIGMSSEMTHP 210
L + P+LD N+ A +FP+ +F + +++ HP
Sbjct: 331 LENLRPKLDQTNLSFSSAPTSFPLFHPSFLPLQNPNQIHHP 371
>gi|9294680|dbj|BAB03046.1| unnamed protein product [Arabidopsis thaliana]
Length = 402
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 6/101 (5%)
Query: 111 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMK 170
+TD ++A R RRE+ISE+++ LQ LVPG K+ A MLDE NY++ L+ QV+
Sbjct: 305 STDPQTVAARQRRERISEKIRVLQTLVPGGTKM-DTASMLDEAANYLKFLRAQVK----A 359
Query: 171 LAAVNPRLD-FNVDNLFAKEAFPVCPSNFPTIGMSSEMTHP 210
L + P+LD N+ A +FP+ +F + +++ HP
Sbjct: 360 LENLRPKLDQTNLSFSSAPTSFPLFHPSFLPLQNPNQIHHP 400
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 113 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
D S+A R RRE+ISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ FL
Sbjct: 127 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRFL 180
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 105 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 164
RA+RG ATD S+ R RREKI+ER+K LQ LVP ++ ML+E I++V+ L+ Q+
Sbjct: 471 RAKRGSATDPQSVYARHRREKINERLKTLQRLVPNGEQV-DIVTMLEEAIHFVKFLEFQL 529
Query: 165 EFL 167
E L
Sbjct: 530 ELL 532
>gi|140084359|gb|ABO84933.1| Rhd6-like 4 [Physcomitrella patens]
Length = 67
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 109 GQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
G ATD S+ R RREKI+ER++ LQ L+P K+ MLDE ++YVQ L+RQV L
Sbjct: 1 GSATDPQSVHARARREKIAERLRKLQHLIPNGGKVD-IVTMLDEAVHYVQFLKRQVTLL 58
>gi|145712853|gb|ABP96466.1| phytochrome interacting factor 4 [Arabidopsis lyrata subsp.
petraea]
Length = 250
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 43/54 (79%), Gaps = 2/54 (3%)
Query: 107 RRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K T KA +LD I+Y++SL
Sbjct: 199 RRSRAAEVHNLSER-RRDRINERMKALQELIPHCSK-TDKASILDGAIDYMKSL 250
>gi|90399331|emb|CAJ86131.1| H0313F03.15 [Oryza sativa Indica Group]
Length = 307
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 114 SHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 169
+H ++ + RR++I+E++K LQ+L+P C K T K MLDE I+Y++SLQ Q++ L M
Sbjct: 143 AHLVSRKRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQMLVM 197
>gi|28393737|gb|AAO42279.1| unknown protein [Arabidopsis thaliana]
Length = 373
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Query: 111 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMK 170
+TD ++A R RRE+ISE+++ LQ LVPG K+ A MLDE NY + L+ QV+
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTKMD-TASMLDEAANYFKFLRAQVK----A 330
Query: 171 LAAVNPRLD-FNVDNLFAKEAFPVCPSNFPTIGMSSEMTHP 210
L + P+LD N+ A +FP+ +F + +++ HP
Sbjct: 331 LENLRPKLDQTNLSFSSAPTSFPLFHPSFLPLQNPNQIHHP 371
>gi|77556450|gb|ABA99246.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|218187186|gb|EEC69613.1| hypothetical protein OsI_38987 [Oryza sativa Indica Group]
gi|222617411|gb|EEE53543.1| hypothetical protein OsJ_36752 [Oryza sativa Japonica Group]
Length = 265
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 60/97 (61%), Gaps = 8/97 (8%)
Query: 84 KADKVQNTKASEVQKHDYIHVRARRGQA-TDSHSLAERVRREKISERMKYLQDLVPGCNK 142
K DK T+ E ++ + +ARR ++H L E+ RR +I+E+ K LQ LVPGC+K
Sbjct: 128 KMDKKLPTRTEERRR---VKHKARRNPGYAETHGLTEKRRRSRINEKFKMLQRLVPGCDK 184
Query: 143 ITGKAGMLDEIINYVQSLQRQVEFL---SMKLAAVNP 176
+ ++ LD I+Y++SLQ+Q++ + ++ AAV P
Sbjct: 185 CS-QSSTLDRTIHYMKSLQQQLQAMYPTMVRPAAVYP 220
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 113 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLA 172
D S+A R RRE+ISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 133 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSIPQ 191
Query: 173 AVNP 176
+ NP
Sbjct: 192 SSNP 195
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 113 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
D S+A R RRE+ISE+++ LQ LVPG K+ A MLDE I+YV+ L+RQ+ L
Sbjct: 134 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKRQIRLL 187
>gi|356567480|ref|XP_003551947.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 397
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
ARR +A + H+L+ER RR++I+E+MK LQ L+P +K T KA ML+E I Y++S
Sbjct: 197 ARRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSK-TDKASMLEEAIEYLKS 249
>gi|357454361|ref|XP_003597461.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486509|gb|AES67712.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 411
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 33/42 (78%)
Query: 102 IHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI 143
+ +RA+RG AT S+AERVRR KISERM+ LQDLVP +KI
Sbjct: 330 MKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKI 371
>gi|140084346|gb|ABO84932.1| Rhd6-like 3 [Physcomitrella patens]
Length = 67
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 109 GQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
G ATD S+ R RREKI+ER+K LQ LVP K+ MLDE I+YVQ LQ QV L
Sbjct: 1 GSATDPQSVYARHRREKINERLKTLQHLVPNGAKVD-IVTMLDEAIHYVQFLQLQVTLL 58
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 113 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
D S+A R RRE+ISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 146 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 199
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 13/105 (12%)
Query: 113 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLA 172
D S+A R RRE+ISE+++ LQ LVPG K+ A MLDE I+YV+ L+ QV+ L + A
Sbjct: 154 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLE-RAA 211
Query: 173 AVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEMTHPAAYLHQF 217
A P A FPV SN + ++ + P+ LH +
Sbjct: 212 ANRP----------AGIGFPVTMSNGSYLPITKQY-QPSQNLHHY 245
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 113 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
D S+A R RRE+ISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ+ L
Sbjct: 138 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 191
>gi|357519927|ref|XP_003630252.1| Transcription factor HEC3 [Medicago truncatula]
gi|355524274|gb|AET04728.1| Transcription factor HEC3 [Medicago truncatula]
Length = 275
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 113 DSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
D S+A R RRE+ISE+++ LQ LVPG K+ A MLDE I YV+ L+RQ++ L
Sbjct: 123 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIKLL 176
>gi|356526934|ref|XP_003532070.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 266
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 106 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 159
ARR +A + H+L+ER RR++I+E+MK LQ L+P +K T KA ML+E I Y++S
Sbjct: 64 ARRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSK-TDKASMLEEAIEYLKS 116
>gi|218187376|gb|EEC69803.1| hypothetical protein OsI_00101 [Oryza sativa Indica Group]
Length = 288
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 79 SFKKRKADKVQNTKASEVQKHDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVP 138
S + R A K Q K S+ K + S A +VRRE+ISER+K LQDLVP
Sbjct: 167 SGEARAAGKKQCRKGSKPNKAASASSPSPSPNKEQPQSAAAKVRRERISERLKVLQDLVP 226
Query: 139 GCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
K+ ML++ INYV+ LQ QV+ L+
Sbjct: 227 NGTKVD-LVTMLEKAINYVKFLQLQVKVLA 255
>gi|145712878|gb|ABP96468.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712880|gb|ABP96469.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712882|gb|ABP96470.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712886|gb|ABP96472.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712892|gb|ABP96475.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712898|gb|ABP96478.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 251
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 59/94 (62%), Gaps = 9/94 (9%)
Query: 74 AVGRESFKKRKADKVQNTKASEVQKHDYIHVRA-------RRGQATDSHSLAERVRREKI 126
A GR RK ++ +T S V D I ++ RR +A + H+L+ER RR++I
Sbjct: 160 ASGRCITTDRKRKRINDTDES-VSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRI 218
Query: 127 SERMKYLQDLVPGCNKITGKAGMLDEIINYVQSL 160
+ERMK LQ+L+P C+K T KA +LDE I+Y++SL
Sbjct: 219 NERMKALQELIPHCSK-TDKASILDEAIDYLKSL 251
>gi|145334163|ref|NP_001078462.1| transcription factor bHLH119 [Arabidopsis thaliana]
gi|218563522|sp|Q8GT73.2|BH119_ARATH RecName: Full=Transcription factor bHLH119; AltName: Full=Basic
helix-loop-helix protein 119; Short=AtbHLH119;
Short=bHLH 119; AltName: Full=Transcription factor EN
104; AltName: Full=bHLH transcription factor bHLH119
gi|332660147|gb|AEE85547.1| transcription factor bHLH119 [Arabidopsis thaliana]
Length = 544
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 65/105 (61%), Gaps = 5/105 (4%)
Query: 66 ALNEKVSAAVGRESFKKRKADKVQNTKASEVQKHDYIH--VRARRGQATDSHSLAERVRR 123
A E+V RE+ K DK + +E+Q + H +R +A D H+L+ER RR
Sbjct: 313 AETERVQIQPERET--KITEDKKREETIAEIQGTEEAHGSTSRKRSRAADMHNLSERRRR 370
Query: 124 EKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 168
E+I+ERMK LQ+L+P C K T K ML+++I YV+SLQ Q++ +S
Sbjct: 371 ERINERMKTLQELLPRCRK-TDKVSMLEDVIEYVKSLQLQIQMMS 414
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 104 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 163
+A R AT+S SL R RRE+I+ER++ LQ+LVP K+ + ML+E + YV+ LQ Q
Sbjct: 210 AKADRRSATESQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVEYVKFLQLQ 268
Query: 164 VEFLS 168
++ LS
Sbjct: 269 IKLLS 273
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 14/111 (12%)
Query: 100 DYIHVRARRGQ---ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 156
+ + +R +R + D S+A R RRE+IS+R++ LQ VPG K+ A MLDE I+Y
Sbjct: 375 EIVQLRPKRRNVRISKDPQSVAARHRRERISDRVRVLQHFVPGGTKM-DTASMLDEAIHY 433
Query: 157 VQSLQRQVEFLSMKLAAVNPRLDFNVDNLFAKEAFPVCPSNFPTIGMSSEM 207
V+ LQ+Q++ L +PR F + P P P +G S+ M
Sbjct: 434 VKFLQQQLQTLERIGNMSDPR--------FMTQ--PGGPMILPQVGASTSM 474
>gi|413921524|gb|AFW61456.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 111 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
+ D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I Y++ L+RQV+ L
Sbjct: 160 SEDPQSVAARHRRERISERVRVLQRLVPGGTKMD-TASMLDEAIRYIKFLKRQVQEL 215
>gi|413921523|gb|AFW61455.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 287
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 111 ATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 167
+ D S+A R RRE+ISER++ LQ LVPG K+ A MLDE I Y++ L+RQV+ L
Sbjct: 159 SEDPQSVAARHRRERISERVRVLQRLVPGGTKMD-TASMLDEAIRYIKFLKRQVQEL 214
>gi|356502774|ref|XP_003520191.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 274
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Query: 109 GQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 165
GQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ QV+
Sbjct: 118 GQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVK 173
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.130 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,610,088,833
Number of Sequences: 23463169
Number of extensions: 186077135
Number of successful extensions: 535755
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 1790
Number of HSP's that attempted gapping in prelim test: 533325
Number of HSP's gapped (non-prelim): 3233
length of query: 302
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 161
effective length of database: 9,050,888,538
effective search space: 1457193054618
effective search space used: 1457193054618
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)