BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 022119
         (302 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P58741|UPPP2_AGRT5 Undecaprenyl-diphosphatase 2 OS=Agrobacterium tumefaciens (strain
           C58 / ATCC 33970) GN=uppP2 PE=3 SV=1
          Length = 278

 Score = 33.9 bits (76), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 5/75 (6%)

Query: 182 FFYIKPAEHEKIIRKFYPEEMGP---VTNVDPIGNSPVIIKKYL--LEEISPTWLNVSLR 236
           F  +  + H +I  +F P    P    T +  IG    ++  +   +  I+  WL  +LR
Sbjct: 20  FLPVSSSAHLRIAGEFLPSGADPGAAFTAITQIGTEMAVLVYFWSDIMRIAAAWLRQNLR 79

Query: 237 MKDDHETDKQFGWVL 251
           + + ++ D + GW++
Sbjct: 80  LGEYNKADARLGWLI 94


>sp|Q8T116|HCYX_SCUCO Hemocyanin subunit X OS=Scutigera coleoptrata GN=HCX PE=2 SV=1
          Length = 685

 Score = 31.6 bits (70), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 11/76 (14%)

Query: 22  FFATYNLLTMVIQNKAADEIGKLNPLTQMPEKTGGGNSGMRFHVALTATDAIYSQWQSRI 81
           F+   +    VI  +  D  GK           G GN G+ + VA +A D ++ QW   +
Sbjct: 362 FYGNIHCYAHVIAARVTDPDGKY----------GQGN-GVMYDVATSARDPLFYQWHKFL 410

Query: 82  MYYWYKKVKDMPRSDM 97
            +++Y+ +  +P + +
Sbjct: 411 DHFFYEHLTKLPTNHL 426


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.322    0.140    0.441 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,493,702
Number of Sequences: 539616
Number of extensions: 5436351
Number of successful extensions: 10341
Number of sequences better than 100.0: 2
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 10339
Number of HSP's gapped (non-prelim): 3
length of query: 302
length of database: 191,569,459
effective HSP length: 117
effective length of query: 185
effective length of database: 128,434,387
effective search space: 23760361595
effective search space used: 23760361595
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)