BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022126
(302 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9NPC3|CIP1_HUMAN E3 ubiquitin-protein ligase CCNB1IP1 OS=Homo sapiens GN=CCNB1IP1
PE=1 SV=1
Length = 277
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 92/179 (51%), Gaps = 11/179 (6%)
Query: 1 MRCN--ACWRELEGRAISTTCGHLLCTEDANKILSND-AACPICDQVLSKSL-MKPVDIN 56
+ CN C +L G A T C H+ C + + S A CP C+ LS L + +++
Sbjct: 8 LLCNYRKCRIKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLDIVRTELS 67
Query: 57 PNDEWVNMAMAGVSPQILMKSAYRSVMFY---LGQKELEMQYKMNRIVAQCRQKCEAMQE 113
P++E+ M +AG+ P+I++ + R++ F+ + Q+ L +Y ++ +Q M++
Sbjct: 68 PSEEYKAMVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQ----MEK 123
Query: 114 KFTEKLEQVHTAYQKMAKRCQMMEQEIESLSKDKQELQEKFSEKSRQKRKLDEMYDQLR 172
+T++++ M M++ +E K ++ EK E++RQ +KL +YD LR
Sbjct: 124 IYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDSLR 182
>sp|Q3UU96|MRCKA_MOUSE Serine/threonine-protein kinase MRCK alpha OS=Mus musculus
GN=Cdc42bpa PE=1 SV=2
Length = 1719
Score = 38.5 bits (88), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 61/120 (50%), Gaps = 13/120 (10%)
Query: 102 AQCRQKCEAMQE--KFTEKLEQVHTAYQKMAKRCQMMEQEIESLSKDKQELQEKFSEKSR 159
A C++K AMQE + E+L ++HT QK+A+ + E+E++ + + + L+++ R
Sbjct: 568 AHCQRKL-AMQEFMEINERLTELHTQKQKLARHVRDKEEEVDLVMQKAESLRQELRRAER 626
Query: 160 QKRKLDEMYDQLRSEYESMKRSAIQPSNSFYPRNDPDLFSANMMDNRDPIRKDWSVYSPG 219
K++L+ + L +E K+ R + +S + + + +++ YSPG
Sbjct: 627 AKKELEVHTEALIAEASKDKK----------LREQSEHYSKQLENELEGLKQKQISYSPG 676
>sp|Q9D4H7|LONF3_MOUSE LON peptidase N-terminal domain and RING finger protein 3 OS=Mus
musculus GN=Lonrf3 PE=2 SV=1
Length = 753
Score = 38.5 bits (88), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MRCNACWRELEGRAISTTCGHLLCTEDANKILSNDAACPICDQVLSKSL 49
+ C+ C R L ++T CGH C + + L ++A CP+C VL + L
Sbjct: 459 LECSLCMR-LFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDVLLQCL 506
>sp|Q5VT25|MRCKA_HUMAN Serine/threonine-protein kinase MRCK alpha OS=Homo sapiens
GN=CDC42BPA PE=1 SV=1
Length = 1732
Score = 38.1 bits (87), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 60/121 (49%), Gaps = 13/121 (10%)
Query: 102 AQCRQKCEAMQE--KFTEKLEQVHTAYQKMAKRCQMMEQEIESLSKDKQELQEKFSEKSR 159
A C++K AMQE + E+L ++HT QK+A+ + E+E++ + + + L+++ R
Sbjct: 568 AHCQRKL-AMQEFMEINERLTELHTQKQKLARHVRDKEEEVDLVMQKVESLRQELRRTER 626
Query: 160 QKRKLDEMYDQLRSEYESMKRSAIQPSNSFYPRNDPDLFSANMMDNRDPIRKDWSVYSPG 219
K++L+ + L A + S R + +S + + + +++ YSPG
Sbjct: 627 AKKELEVHTEAL----------AAEASKDRKLREQSEHYSKQLENELEGLKQKQISYSPG 676
Query: 220 T 220
Sbjct: 677 V 677
>sp|Q496Y0|LONF3_HUMAN LON peptidase N-terminal domain and RING finger protein 3 OS=Homo
sapiens GN=LONRF3 PE=1 SV=1
Length = 759
Score = 37.7 bits (86), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 1 MRCNACWRELEGRAISTTCGHLLCTEDANKILSNDAACPICDQVLSKSL 49
+ C C R L ++T CGH C + + L ++A CP+C LS+ L
Sbjct: 465 LECALCMR-LFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCL 512
>sp|Q8HXH0|LONF3_MACFA LON peptidase N-terminal domain and RING finger protein 3 OS=Macaca
fascicularis GN=LONRF3 PE=2 SV=1
Length = 718
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 1 MRCNACWRELEGRAISTTCGHLLCTEDANKILSNDAACPICDQVLSKSL 49
+ C C R L ++T CGH C + + L ++A CP+C LS+ L
Sbjct: 424 LECALCMR-LFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCL 471
>sp|Q6FPI4|RAD18_CANGA Postreplication repair E3 ubiquitin-protein ligase RAD18
OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=RAD18 PE=3 SV=1
Length = 411
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 1 MRCNACWRELEGRAISTTCGHLLCTEDANKILSNDAACPICDQVLSKSLMK 51
+RC+ C ++ + T CGH C+ LSN+ CP+C L +S+++
Sbjct: 25 LRCHIC-KDFLKNPVLTPCGHTFCSLCIRGYLSNEPKCPLCLHELRESMLR 74
>sp|P47037|SMC3_YEAST Structural maintenance of chromosomes protein 3 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SMC3 PE=1
SV=1
Length = 1230
Score = 37.4 bits (85), Expect = 0.15, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Query: 88 QKELEMQYKMNRIVAQCRQKCEAMQEKFTEKLEQVHTAYQKMAKRCQMMEQEIESLSKDK 147
Q+++E + + + ++ +++ E+ +KL ++ YQ++ K M + ++ SL + +
Sbjct: 321 QQQIESNEEQRNLDSATLKEIKSIIEQRKQKLSKILPRYQELTKEEAMYKLQLASLQQKQ 380
Query: 148 QELQEKFSEKSRQKRKLDEMYDQLRSEYESMKRSAIQPSNSFYPRNDPDLFSANMMDNRD 207
++L K E +R K K DE + SE E +K S+IQ N +L S MD R
Sbjct: 381 RDLILKKGEYARFKSK-DERDTWIHSEIEELK-SSIQNLN--------ELESQLQMD-RT 429
Query: 208 PIRKDWS 214
+RK +S
Sbjct: 430 SLRKQYS 436
>sp|Q6CTZ8|RAD18_KLULA Postreplication repair E3 ubiquitin-protein ligase RAD18
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=RAD18
PE=3 SV=1
Length = 427
Score = 36.6 bits (83), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 1 MRCNACWRELEGRAISTTCGHLLCTEDANKILSNDAACPICDQVLSKSLMK 51
+RC+ C ++ ++ T CGH C+ K L ++ CP+C L++S+++
Sbjct: 30 LRCHIC-KDFLKASVLTPCGHSFCSICIRKYLQKESKCPLCLSDLTESMLQ 79
>sp|O54874|MRCKA_RAT Serine/threonine-protein kinase MRCK alpha OS=Rattus norvegicus
GN=Cdc42bpa PE=1 SV=1
Length = 1732
Score = 36.2 bits (82), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 102 AQCRQKCEAMQE--KFTEKLEQVHTAYQKMAKRCQMMEQEIESLSKDKQELQEKFSEKSR 159
A C++K AMQE + E+L ++HT QK+A+ + E+E++ + + + L+++ R
Sbjct: 568 AHCQRKL-AMQEFMEINERLTELHTQKQKLARHVRDKEEEVDLVMQKAESLRQELRRAER 626
Query: 160 QKRKLDEMYDQLRSE 174
K++L+ + L +E
Sbjct: 627 AKKELEVHTEALIAE 641
>sp|O60292|SI1L3_HUMAN Signal-induced proliferation-associated 1-like protein 3 OS=Homo
sapiens GN=SIPA1L3 PE=1 SV=3
Length = 1781
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 119 LEQVHTAYQKMAKRCQMMEQEIESLSKDKQELQEKFSEKSRQKRKLDEMY 168
L+Q+HT QK + +++ E+ SL ++ Q LQE+ S Q RK E++
Sbjct: 1725 LKQLHTDLQKEKQDKVVLQSEVASLRQNNQRLQEESQAASEQLRKFAEIF 1774
>sp|O67124|RAD50_AQUAE Probable DNA double-strand break repair Rad50 ATPase OS=Aquifex
aeolicus (strain VF5) GN=rad50 PE=3 SV=1
Length = 978
Score = 34.7 bits (78), Expect = 0.87, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 69/172 (40%), Gaps = 16/172 (9%)
Query: 32 LSNDAACPICDQVLSKSLMKPVDINPNDEWVNMAMAGVSPQILMKSAYRSVMFYLGQKEL 91
LS CP+C + ++ VD E + + + + + + +
Sbjct: 480 LSPGDTCPVCGGIYRGKALENVDAEGISELKHAKELKEKEEREIDTTLKLYAQKINSLKE 539
Query: 92 EMQYKMNRIVAQCRQKCEAMQEKFTEKLEQVHTAYQKMAKRCQMMEQEIESLSKDKQE-- 149
EM+ N + ++ E ++E+ +KLE++ +K+ + + +E K K+E
Sbjct: 540 EMEKLRNEVEELRKEIPENLKERI-KKLEELRIEKEKLEHKLNKYRKALEDRQKQKEEAQ 598
Query: 150 ------------LQEKFSEKSRQKRKLDEMYDQLRSE-YESMKRSAIQPSNS 188
L+EK EKSR ++ E+Y R E YE + I NS
Sbjct: 599 AKLHKAQTELELLKEKIREKSRLVKEFKELYRVERLEDYEESLKEEINYINS 650
>sp|Q9C0U7|VPS5_SCHPO Vacuolar protein sorting-associated protein vps5
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=vps5 PE=1 SV=1
Length = 576
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 86 LGQKELEMQYKMNRIVAQCRQKCEAMQEKFTEKLEQVHTAYQKMAKRCQMMEQEIESLSK 145
L Q ++E+++ R VAQ E++ +E A+ K Q + ++++S+
Sbjct: 427 LSQLQVELRFVQERKVAQDNLTLGTTLEEYIRYVESAKNAFTTRQKLWQTWQSSVQAVSR 486
Query: 146 DKQELQE-KFSEKSRQKR--KLDEMYDQLRSEYESMKR 180
K +L++ K KS+QK L+E Y++ R++ +++
Sbjct: 487 AKTQLEKCKKQAKSQQKSLPYLEEQYEKYRAKAADLEK 524
>sp|Q5ZIB2|FBF1_CHICK Fas-binding factor 1 homolog OS=Gallus gallus GN=FBF1 PE=2 SV=1
Length = 1132
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 56/99 (56%), Gaps = 10/99 (10%)
Query: 74 LMKSAYRSVMFYLGQKELEMQYKMNRIVAQCRQKCE-AMQEKFTEKLEQVHTAYQKMAKR 132
L K + + Q+E E++ M+++ AQ ++ E A+Q+ ++E H A R
Sbjct: 955 LEKEKVKGATLRIRQQEEEIK-NMSKLSAQKYEEGERALQDAC--RIESEHQA------R 1005
Query: 133 CQMMEQEIESLSKDKQELQEKFSEKSRQKRKLDEMYDQL 171
Q+M+Q +E L + +Q LQ++ + Q+R+L++++ +L
Sbjct: 1006 LQVMQQHLEQLKQQEQHLQQERLSMAHQRRQLEQLHKKL 1044
>sp|Q3U3C9|GSE1_MOUSE Genetic suppressor element 1 OS=Mus musculus GN=Gse1 PE=2 SV=2
Length = 1213
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 42/75 (56%)
Query: 106 QKCEAMQEKFTEKLEQVHTAYQKMAKRCQMMEQEIESLSKDKQELQEKFSEKSRQKRKLD 165
Q EA+ E + E +E+ + Q + +C+ +E + SLS ++L +E QK+K+
Sbjct: 1120 QGIEAIFEAYQEHIEEQNLERQVLQTQCRRLEAQNYSLSLTAEQLSHSMAELRSQKQKMV 1179
Query: 166 EMYDQLRSEYESMKR 180
++L++E + +++
Sbjct: 1180 SERERLQAELDHLRK 1194
>sp|Q14687|GSE1_HUMAN Genetic suppressor element 1 OS=Homo sapiens GN=GSE1 PE=1 SV=3
Length = 1217
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 41/75 (54%)
Query: 106 QKCEAMQEKFTEKLEQVHTAYQKMAKRCQMMEQEIESLSKDKQELQEKFSEKSRQKRKLD 165
Q EA+ E + E +E+ + Q + +C+ +E SLS ++L +E QK+K+
Sbjct: 1124 QGIEAVFEAYQEHIEEQNLERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMV 1183
Query: 166 EMYDQLRSEYESMKR 180
++L++E + +++
Sbjct: 1184 SERERLQAELDHLRK 1198
>sp|Q8SS35|Y4A0_ENCCU Probable myosin havy chain ECU04_1000 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=ECU04_1000 PE=1 SV=1
Length = 1700
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 102 AQCRQKCEAMQEKFTEKLEQVHTAYQKMAKRCQMMEQEIESLSKDKQELQEKFSEKSRQK 161
A+ R+ EA+Q+K +++E + ++ + + +E E L + +++L + + +
Sbjct: 1061 AELREDYEALQKKLKDEVEDMQVENDRLHNEIRKISKEREELGRMQKKLLDDLEFERNRG 1120
Query: 162 RKLDEMYDQLRSEYESMKRSAIQPSNSF 189
KL++ + +LR EYE+++ +Q F
Sbjct: 1121 SKLEKAFQELRGEYEAVE-GQLQKERQF 1147
>sp|Q07DX4|CTTB2_NOMLE Cortactin-binding protein 2 OS=Nomascus leucogenys GN=CTTNBP2 PE=3
SV=1
Length = 1663
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 86 LGQKELEMQYKMNRIVAQCRQKCEAMQEKFTEKLEQVHTAYQKMAKRCQMMEQEIESLSK 145
L K +E K+ I+A K E ++K E E++ T ++ + ME+++
Sbjct: 181 LSGKVIEEAQKLEDIMA----KLEEEKKKTNELEEELSTEKRRSTEMEAQMEKQLSEFDT 236
Query: 146 DKQELQEKFSEKSRQKRKLDEMYDQLRSEYESMKRSAIQPSNSFYPRNDPD 196
++++L+ K + + L E D+++ E +KR + + PR D
Sbjct: 237 EREQLRAKLNREEAHTTDLKEEIDKMKKMIEQLKRGSDSKPSLSLPRKTKD 287
>sp|Q1LWL6|GSE1_DANRE Genetic suppressor element 1 OS=Danio rerio GN=gse1 PE=4 SV=1
Length = 1203
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%)
Query: 106 QKCEAMQEKFTEKLEQVHTAYQKMAKRCQMMEQEIESLSKDKQELQEKFSEKSRQKRKLD 165
Q EA+ E + E E+ Q + +C+ +E +LS ++L E QK+KL
Sbjct: 1109 QGIEAIFEAYQEYAEEQSIERQVLHSQCRRLEAHHYNLSLTAEQLSHSMGELMAQKQKLA 1168
Query: 166 EMYDQLRSEYESMKR 180
+ L++E E K+
Sbjct: 1169 AERENLQAELEHFKK 1183
>sp|O62479|SAS6_CAEEL Spindle assembly abnormal protein 6 OS=Caenorhabditis elegans
GN=sas-6 PE=1 SV=1
Length = 492
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 95 YKMNRIVAQCRQKCEAMQEKFTEKLEQVHTAYQKMAKRCQMMEQEIESLSKDKQELQEKF 154
YK +A RQKC + EK EKL V +++M+++ + +E E+E + ++++ ++
Sbjct: 191 YKSADELASLRQKCGDL-EKQVEKLSGVKEEFEEMSEKFKELEDEVELVKEERENIRLLV 249
Query: 155 SEKSRQKRKLDEMYDQLRSEYESMKR 180
+K DE+ D L+ + ES+++
Sbjct: 250 EDKE------DEVAD-LKQDTESLQK 268
>sp|Q02440|MYO5A_CHICK Unconventional myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1
Length = 1829
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 17/106 (16%)
Query: 124 TAYQKMAKRCQMMEQEIESLS-----KDKQELQEKFSEKSRQKRKLDEMYDQLRSEYESM 178
+ + K+ KR +EQE +SL K++Q L+ K E+ R + E+ EYES+
Sbjct: 1154 SLFLKLQKRVTELEQEKQSLQDELDRKEEQALRAKAKEEERPPIRGAEL------EYESL 1207
Query: 179 KRSAIQPSNSFYPRNDPDLFSANMMDNRDPIRKDWSVYSPGTPGPR 224
KR ++ N +N+ + + + R P V +PG P R
Sbjct: 1208 KRQELESENK-KLKNELNELQKALTETRAP-----EVTAPGAPAYR 1247
>sp|Q2QL82|CTTB2_MICMU Cortactin-binding protein 2 OS=Microcebus murinus GN=CTTNBP2 PE=3
SV=1
Length = 1647
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 89/213 (41%), Gaps = 35/213 (16%)
Query: 98 NRIVAQCRQKCEAM-----QEKFTEKLEQVHTAYQKMAKRCQM-MEQEIESLSKDKQELQ 151
+++ + ++ EAM ++K T +LE+ +A ++ + + ME+++ ++++L+
Sbjct: 183 GKVIEEAQKLEEAMAKLEEEKKKTNELEEELSAEKRRSTEMEAQMEKQLSEFDTEREQLR 242
Query: 152 EKFSEKSRQKRKLDEMYDQLRSEYESMKRSAIQPSNSFYPRNDPD--LFSANM------- 202
K + + L E D+++ E +KR + + PR D L S ++
Sbjct: 243 AKLNREEAHTTDLKEEIDKMKKMIEQLKRGSDSKPSLSLPRKTKDRRLVSISVGTEGPLT 302
Query: 203 ----------MDNRDPIRKDWSVYSPGTPGPREDIWPARQNSSNSGP-------FDIATG 245
++ D ++K + PG P P N+++ P TG
Sbjct: 303 RSVACQTDLAIEGTDHVKKS-PLTVPGKPSPGSAKGSVCANAAHVRPGMDRQASHGDLTG 361
Query: 246 SPAKQPVIPVDGGNRRADARPAFGGGAANPSMT 278
S A P +P NR + P+ G A PS T
Sbjct: 362 SSA--PSLPPASANRIEENGPSTGSTADLPSST 392
>sp|Q2IBE6|CTTB2_PONAB Cortactin-binding protein 2 OS=Pongo abelii GN=CTTNBP2 PE=3 SV=2
Length = 1663
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 86 LGQKELEMQYKMNRIVAQCRQKCEAMQEKFTEKLEQVHTAYQKMAKRCQMMEQEIESLSK 145
L K +E K+ ++A K E ++K E E++ T ++ + ME+++
Sbjct: 181 LSGKVIEEAQKLEDVMA----KLEEEKKKTNELEEELSTEKRRSTEMEAQMEKQLSEFDT 236
Query: 146 DKQELQEKFSEKSRQKRKLDEMYDQLRSEYESMKRSAIQPSNSFYPRNDPD 196
++++L+ K + + L E D+++ E +KR + + PR D
Sbjct: 237 EREQLRAKLNREEAHTTDLKEEIDKMKKMIEQLKRGSDSKPSLSLPRKTKD 287
>sp|Q09YM8|CTTB2_RABIT Cortactin-binding protein 2 OS=Oryctolagus cuniculus GN=CTTNBP2
PE=3 SV=1
Length = 1664
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 86 LGQKELEMQYKMNRIVAQCRQKCEAMQEKFTEKLEQVHTAYQKMAKRCQMMEQEIESLSK 145
L K +E K+ ++A ++ ++K + EQ+ T ++ A+ ME+++
Sbjct: 181 LSGKVIEEAQKLEEVMASLEEE----KKKTNDLEEQLCTEKRRSAEMEAQMEKQLSEFDT 236
Query: 146 DKQELQEKFSEKSRQKRKLDEMYDQLRSEYESMKRSAIQPSNSFYPRNDPD 196
++++L+ K + + L E D+++ E +KR + + PR D
Sbjct: 237 EREQLRAKLNREEAHTTDLKEEIDKMKKMIEQLKRGSDSKPSLSLPRKTKD 287
>sp|Q09YG9|CTTB2_SAIBB Cortactin-binding protein 2 OS=Saimiri boliviensis boliviensis
GN=CTTNBP2 PE=3 SV=1
Length = 1659
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 86 LGQKELEMQYKMNRIVAQCRQKCEAMQEKFTEKLEQVHTAYQKMAKRCQMMEQEIESLSK 145
L K +E K+ ++A K E ++K E E++ Q+ + ME+++
Sbjct: 181 LSGKVIEEAQKLEDVMA----KLEEEKKKTNELEEELSAEKQRSTEMEAQMEKQLSEFDT 236
Query: 146 DKQELQEKFSEKSRQKRKLDEMYDQLRSEYESMKRSAIQPSNSFYPRNDPD 196
++++L+ K + + L E D+++ E +KR + + PR D
Sbjct: 237 EREQLRAKLNREEAHTTDLKEEIDKMKKMIEQLKRGSDSKPSLSLPRKTKD 287
>sp|Q8WZ74|CTTB2_HUMAN Cortactin-binding protein 2 OS=Homo sapiens GN=CTTNBP2 PE=1 SV=1
Length = 1663
Score = 32.3 bits (72), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 86 LGQKELEMQYKMNRIVAQCRQKCEAMQEKFTEKLEQVHTAYQKMAKRCQM-MEQEIESLS 144
L K +E K+ ++A+ + ++K T +LE+ +A ++ + + ME+++
Sbjct: 181 LSGKVIEEAQKLEDVMAKLEE-----EKKKTNELEEELSAEKRRSTEMEAQMEKQLSEFD 235
Query: 145 KDKQELQEKFSEKSRQKRKLDEMYDQLRSEYESMKRSAIQPSNSFYPRNDPD 196
++++L+ K + + L E D++R E +KR + + PR D
Sbjct: 236 TEREQLRAKLNREEAHTTDLKEEIDKMRKMIEQLKRGSDSKPSLSLPRKTKD 287
>sp|Q09YI1|CTTB2_SHEEP Cortactin-binding protein 2 OS=Ovis aries GN=CTTNBP2 PE=3 SV=1
Length = 1641
Score = 32.3 bits (72), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 86 LGQKELEMQYKMNRIVAQCRQKCEAMQEKFTEKLEQVHTAYQKMAKRCQMMEQEIESLSK 145
L K LE K+ ++A K E ++K + E++ T ++ A+ ME+++
Sbjct: 181 LSGKVLEEAQKLEEVMA----KLEEEKKKTSALEEELATEKRRSAEMEAQMEKQLSEFDT 236
Query: 146 DKQELQEKFSEKSRQKRKLDEMYDQLRSEYESMKRSAIQPSNSFYPRNDPD 196
++++L+ K + L E D+++ E +KR + PR D
Sbjct: 237 EREQLRAKLHREEAHTTDLKEEIDKMKKMIEQLKRGNDSKPSLSLPRKTKD 287
>sp|P10587|MYH11_CHICK Myosin-11 OS=Gallus gallus GN=MYH11 PE=1 SV=4
Length = 1979
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 21/99 (21%)
Query: 101 VAQCRQKCEAMQEKFTEKLEQVHTAYQKMAKRCQMMEQ-------EIESLSKDK------ 147
V + RQK E+ TE+LEQ A + K Q +E+ EI SLS+ K
Sbjct: 1200 VQEMRQKHTQAVEELTEQLEQFKRAKANLDKTKQTLEKDNADLANEIRSLSQAKQDVEHK 1259
Query: 148 --------QELQEKFSEKSRQKRKLDEMYDQLRSEYESM 178
Q+LQ K+S+ R + +L+E +L+ E E++
Sbjct: 1260 KKKLEVQLQDLQSKYSDGERVRTELNEKVHKLQIEVENV 1298
>sp|Q28G12|CCD22_XENTR Coiled-coil domain-containing protein 22 OS=Xenopus tropicalis
GN=ccdc22 PE=2 SV=1
Length = 632
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Query: 95 YKMNRIVAQCRQKCEAMQEKFTEKLEQVHTAYQKMAKRCQMMEQEIESLSKDKQELQEKF 154
++M +V Q E+ Q + +E+ Y+++ + Q E E KD ++L EK
Sbjct: 417 HRMANLVGQW----ESHQVRLSEE-------YRELKRVQQEQEDESSRWMKDAKDLYEKI 465
Query: 155 SEKSRQKRKLDEMYDQLRSEYESM 178
+ + ++ +E+Y QL SEYES+
Sbjct: 466 RGAADEAKRKEELYKQLLSEYESL 489
>sp|Q9UBC2|EP15R_HUMAN Epidermal growth factor receptor substrate 15-like 1 OS=Homo
sapiens GN=EPS15L1 PE=1 SV=1
Length = 864
Score = 31.6 bits (70), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 85 YLGQKELEMQYKMNRIVAQCRQKCEAMQEKFTEKLEQVHTAYQKMAKRCQMMEQEIESLS 144
+ G KEL+ +++ +AQ +++ ++++ EK E + ++ + +++E SL
Sbjct: 380 FTGVKELD---DISQEIAQLQREKYSLEQDIREKEEAIRQKTSEVQELQNDLDRETSSLQ 436
Query: 145 K---DKQELQEKFSEKSRQKRKLDEMYDQLR 172
+ KQ+ Q++ E +QK KL +M +R
Sbjct: 437 ELEAQKQDAQDRLDEMDQQKAKLRDMLSDVR 467
>sp|Q1XHT8|TRI40_PANTR Tripartite motif-containing protein 40 OS=Pan troglodytes
GN=TRIM40 PE=3 SV=1
Length = 229
Score = 31.6 bits (70), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 3 CNACWRELEGRAISTTCGHLLC----TEDANKILSNDA-ACPICDQVLSKSLMKPVDINP 57
C C L+ A+ST CGHL C T+ K ++ CP+C + S+ ++ I P
Sbjct: 14 CPICQESLK-EAVSTNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPCSEEVLGTGYICP 72
Query: 58 NDE 60
N +
Sbjct: 73 NHQ 75
>sp|Q10218|PPC89_SCHPO Spindle pole body protein ppc89 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ppc89 PE=1 SV=1
Length = 783
Score = 31.6 bits (70), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 100 IVAQCRQKCEAMQEKFTEKLEQVHTAYQKMAKRCQMMEQEI--ESLSK------DKQELQ 151
I+ + R +C A ++ +KLE + AY + +R + +E+ + E L+K D
Sbjct: 302 ILKRERNECNAKIDELQDKLELLTDAYNREKRRARSLEERMSKEMLTKLGESNVDDGMAA 361
Query: 152 EKFSEKSRQKRKLDEMYDQLRSEYESMK 179
++ R+K +L E L+ +YE ++
Sbjct: 362 SRYDTVKREKERLSEHLKSLQEQYEHIQ 389
>sp|Q6DV79|STAT3_CHICK Signal transducer and activator of transcription 3 OS=Gallus gallus
GN=STAT3 PE=1 SV=2
Length = 771
Score = 31.6 bits (70), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 73 ILMKSAYRSVMFYLGQKELEMQYKMNRIVAQCRQKCEAMQEKFTEKLEQ----VHTAYQK 128
+L + R + +L + LE ++ RIVA+C + + + +Q H
Sbjct: 77 VLYQHNLRRIKQFLQSRYLEKPMEIARIVARCLWEESRLLQTAATAAQQGGQATHPTAAV 136
Query: 129 MAKRCQMMEQEIESLSKDKQELQEKFSEKSRQKRKLDEMYDQLRSE 174
+ ++ QM+EQ ++ + K Q+L++K + D Y L+S+
Sbjct: 137 VTEKQQMLEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLKSQ 182
>sp|A0M8S4|CTTB2_PAPAN Cortactin-binding protein 2 OS=Papio anubis GN=CTTNBP2 PE=3 SV=1
Length = 1663
Score = 31.6 bits (70), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 86 LGQKELEMQYKMNRIVAQCRQKCEAMQEKFTEKLEQVHTAYQKMAKRCQM-MEQEIESLS 144
L K +E K+ I+A+ + ++K T +LE+ +A ++ + + ME+++
Sbjct: 181 LSGKVIEEAQKLEDIMAKLEE-----EKKKTNELEEELSAEKRRSTEMEAQMEKQLSEFD 235
Query: 145 KDKQELQEKFSEKSRQKRKLDEMYDQLRSEYESMKRSAIQPSNSFYPRNDPD 196
++++L+ K + + L E D+++ E +KR + + PR D
Sbjct: 236 TEREQLRAKLNREEAHTTDLKEEIDKMKKMIEQLKRGSDSKPSLSLPRKTKD 287
>sp|Q2IBF8|CTTB2_EULMM Cortactin-binding protein 2 OS=Eulemur macaco macaco GN=CTTNBP2
PE=3 SV=1
Length = 1653
Score = 31.6 bits (70), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/118 (20%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query: 86 LGQKELEMQYKMNRIVAQCRQKCEAMQEKFTEKLEQVHTAYQKMAKRCQM-MEQEIESLS 144
L K +E K+ ++A+ + ++K T +LE+ +A ++ + + ME+++
Sbjct: 181 LSGKVIEEAQKLEEVMAKLEE-----EKKKTNELEEELSAEKRRSTEMEAQMEKQLSEFD 235
Query: 145 KDKQELQEKFSEKSRQKRKLDEMYDQLRSEYESMKRSAIQPSNSFYPRNDPDLFSANM 202
++++L+ K + + L E D+++ E +KR + + PR D S ++
Sbjct: 236 TEREQLRAKLNREEAHTTDLKEEIDKMKKMIEQLKRGSDSKPSLSLPRKTKDRRSVSI 293
>sp|Q07DY4|CTTB2_COLGU Cortactin-binding protein 2 OS=Colobus guereza GN=CTTNBP2 PE=3 SV=1
Length = 1663
Score = 31.6 bits (70), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 86 LGQKELEMQYKMNRIVAQCRQKCEAMQEKFTEKLEQVHTAYQKMAKRCQM-MEQEIESLS 144
L K +E K+ I+A+ + ++K T +LE+ +A ++ + + ME+++
Sbjct: 181 LSGKVIEEAQKLEDIMAKLEE-----EKKKTNELEEELSAEKRRSTEMEAQMEKQLSEFD 235
Query: 145 KDKQELQEKFSEKSRQKRKLDEMYDQLRSEYESMKRSAIQPSNSFYPRNDPD 196
++++L+ K + + L E D+++ E +KR + + PR D
Sbjct: 236 TEREQLRAKLNREEAHTTDLKEEIDKMKKMIEQLKRGSDSKPSLSLPRKTKD 287
>sp|Q07DW4|CTTB2_MUNRE Cortactin-binding protein 2 OS=Muntiacus reevesi GN=CTTNBP2 PE=3
SV=1
Length = 1642
Score = 31.2 bits (69), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 86 LGQKELEMQYKMNRIVAQCRQKCEAMQEKFTEKLEQVHTAYQKMAKRCQMMEQEIESLSK 145
L K LE K+ ++A K E ++K + E++ T ++ + ME+++
Sbjct: 181 LSGKVLEEAQKLEEVMA----KLEEEKKKTSALEEELATEKRRSTEMEAQMEKQLSEFDT 236
Query: 146 DKQELQEKFSEKSRQKRKLDEMYDQLRSEYESMKRSAIQPSNSFYPRNDPD 196
++++L+ K + L E D+++ E +KR PR D
Sbjct: 237 EREQLRAKLHREEAHTADLKEEIDKMKKMIEQLKRGTDSKPGLSLPRKTKD 287
>sp|Q09YJ3|CTTB2_MUNMU Cortactin-binding protein 2 OS=Muntiacus muntjak GN=CTTNBP2 PE=3
SV=1
Length = 1642
Score = 31.2 bits (69), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 86 LGQKELEMQYKMNRIVAQCRQKCEAMQEKFTEKLEQVHTAYQKMAKRCQMMEQEIESLSK 145
L K LE K+ ++A K E ++K + E++ T ++ + ME+++
Sbjct: 181 LSGKVLEEAQKLEEVMA----KLEEEKKKTSALEEELATEKRRSTEMEAQMEKQLSEFDT 236
Query: 146 DKQELQEKFSEKSRQKRKLDEMYDQLRSEYESMKRSAIQPSNSFYPRNDPD 196
++++L+ K + L E D+++ E +KR PR D
Sbjct: 237 EREQLRAKLHREEAHTADLKEEIDKMKKMIEQLKRGTDSKPGLSLPRKTKD 287
>sp|Q6PA15|CCD22_XENLA Coiled-coil domain-containing protein 22 OS=Xenopus laevis
GN=ccdc22 PE=2 SV=1
Length = 632
Score = 31.2 bits (69), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 126 YQKMAKRCQMMEQEIESLSKDKQELQEKFSEKSRQKRKLDEMYDQLRSEYESM 178
Y ++ + Q E E KD ++L EK + + ++ +E+Y QL SEYES+
Sbjct: 437 YMELNRVQQEQEDESSRWMKDAKDLYEKIQGSADEAKRKEELYKQLLSEYESL 489
>sp|Q00PJ1|CTTB2_ATEAB Cortactin-binding protein 2 OS=Atelerix albiventris GN=CTTNBP2 PE=3
SV=1
Length = 1654
Score = 31.2 bits (69), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 92 EMQYKMNRIVAQCRQKCEAMQEKFTE---KLEQVHTAYQKMAKRCQMMEQEIESLSKDKQ 148
E + K +V ++C+ + K E KL++V T ++ K+ +E+E LS +KQ
Sbjct: 162 EERNKNKHVVLMLVKECKQLSGKVIEEAQKLDEVMTKLEEEKKKTTALEEE---LSAEKQ 218
Query: 149 ELQEKFSEKSRQKRKLDEMYDQLRSEYE 176
E ++ +Q + D +QLR++
Sbjct: 219 RSTEMEAQMEKQLSEFDTEREQLRAKLH 246
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,536,599
Number of Sequences: 539616
Number of extensions: 4741517
Number of successful extensions: 31839
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 778
Number of HSP's that attempted gapping in prelim test: 27230
Number of HSP's gapped (non-prelim): 4986
length of query: 302
length of database: 191,569,459
effective HSP length: 117
effective length of query: 185
effective length of database: 128,434,387
effective search space: 23760361595
effective search space used: 23760361595
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)