Query 022127
Match_columns 302
No_of_seqs 519 out of 1168
Neff 11.5
Searched_HMMs 46136
Date Fri Mar 29 08:14:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022127.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022127hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2532 Permease of the major 100.0 3.6E-36 7.7E-41 251.2 25.9 300 1-300 146-451 (466)
2 COG2271 UhpC Sugar phosphate p 100.0 1.9E-34 4.1E-39 228.8 18.6 290 1-297 135-435 (448)
3 TIGR00894 2A0114euk Na(+)-depe 100.0 1.5E-31 3.2E-36 228.7 27.8 299 1-299 149-453 (465)
4 TIGR00893 2A0114 d-galactonate 100.0 3.3E-29 7.2E-34 210.1 27.6 291 2-294 101-397 (399)
5 PRK11663 regulatory protein Uh 100.0 3.6E-29 7.9E-34 211.8 25.8 295 1-300 129-428 (434)
6 COG2814 AraJ Arabinose efflux 100.0 6.9E-29 1.5E-33 199.6 25.8 269 2-299 120-389 (394)
7 PRK09556 uhpT sugar phosphate 100.0 1.5E-29 3.2E-34 216.2 22.6 285 1-295 140-448 (467)
8 TIGR00903 2A0129 major facilit 100.0 1.8E-28 3.9E-33 202.2 26.4 264 3-293 98-362 (368)
9 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.3E-28 2.9E-33 206.9 22.4 275 2-285 115-410 (412)
10 PRK03545 putative arabinose tr 100.0 7.7E-28 1.7E-32 201.4 26.5 266 2-298 116-382 (390)
11 COG2223 NarK Nitrate/nitrite t 100.0 3.9E-28 8.5E-33 193.2 20.9 270 1-296 122-401 (417)
12 PRK11273 glpT sn-glycerol-3-ph 100.0 4.6E-27 9.9E-32 200.1 27.3 291 2-299 139-438 (452)
13 TIGR00712 glpT glycerol-3-phos 100.0 1.5E-27 3.3E-32 202.3 24.0 293 2-301 137-438 (438)
14 PLN00028 nitrate transmembrane 100.0 1.3E-26 2.9E-31 198.0 23.3 281 4-296 144-433 (476)
15 TIGR00899 2A0120 sugar efflux 100.0 3.6E-26 7.8E-31 190.5 25.2 266 2-295 106-373 (375)
16 PRK10642 proline/glycine betai 100.0 1.8E-25 4E-30 192.0 27.3 280 1-295 136-429 (490)
17 PRK11551 putative 3-hydroxyphe 100.0 6.7E-26 1.5E-30 190.8 24.1 270 2-295 122-395 (406)
18 TIGR00897 2A0118 polyol permea 100.0 1.9E-25 4.2E-30 187.5 26.7 274 2-295 124-400 (402)
19 PRK10406 alpha-ketoglutarate t 99.9 1.2E-25 2.5E-30 190.5 24.3 272 1-299 142-427 (432)
20 PRK09952 shikimate transporter 99.9 3.1E-25 6.8E-30 187.9 25.4 277 1-298 143-435 (438)
21 PRK10213 nepI ribonucleoside t 99.9 7E-25 1.5E-29 183.3 26.9 259 2-290 127-385 (394)
22 PRK10091 MFS transport protein 99.9 6.9E-25 1.5E-29 183.0 26.6 267 2-299 110-379 (382)
23 PRK15011 sugar efflux transpor 99.9 5.5E-25 1.2E-29 184.2 25.6 264 2-295 124-390 (393)
24 PRK10489 enterobactin exporter 99.9 6.1E-25 1.3E-29 185.5 25.9 268 2-294 129-397 (417)
25 TIGR00892 2A0113 monocarboxyla 99.9 1E-25 2.2E-30 191.6 21.1 283 2-291 127-416 (455)
26 TIGR00881 2A0104 phosphoglycer 99.9 2.8E-26 6.1E-31 191.3 17.5 270 1-277 101-378 (379)
27 PRK11010 ampG muropeptide tran 99.9 1.4E-24 3E-29 186.0 28.1 272 2-296 126-403 (491)
28 TIGR00900 2A0121 H+ Antiporter 99.9 6.7E-25 1.5E-29 182.1 24.0 252 2-272 111-365 (365)
29 TIGR00890 2A0111 Oxalate/Forma 99.9 5E-25 1.1E-29 183.6 23.3 263 2-289 110-375 (377)
30 PRK03699 putative transporter; 99.9 8.9E-25 1.9E-29 183.0 24.0 267 2-297 114-381 (394)
31 PRK09705 cynX putative cyanate 99.9 2.5E-24 5.4E-29 180.1 25.6 265 2-299 116-384 (393)
32 TIGR00710 efflux_Bcr_CflA drug 99.9 1.4E-23 3.1E-28 175.5 26.6 245 2-270 112-361 (385)
33 PRK15402 multidrug efflux syst 99.9 2.3E-23 5E-28 175.3 27.7 251 2-275 120-375 (406)
34 PRK11102 bicyclomycin/multidru 99.9 2.6E-23 5.6E-28 173.5 27.3 274 2-300 98-376 (377)
35 TIGR00902 2A0127 phenyl propri 99.9 1.6E-23 3.4E-28 174.7 25.4 261 2-291 113-374 (382)
36 PRK14995 methyl viologen resis 99.9 4.4E-24 9.5E-29 183.6 22.7 259 2-269 113-412 (495)
37 PRK15034 nitrate/nitrite trans 99.9 7.1E-24 1.5E-28 176.5 23.0 263 1-295 145-453 (462)
38 PRK09874 drug efflux system pr 99.9 1.1E-23 2.3E-28 177.6 24.3 269 2-296 125-398 (408)
39 TIGR00883 2A0106 metabolite-pr 99.9 4.4E-24 9.5E-29 179.0 21.4 262 2-286 115-391 (394)
40 PF07690 MFS_1: Major Facilita 99.9 5.7E-25 1.2E-29 181.7 15.4 245 2-261 104-352 (352)
41 PRK11646 multidrug resistance 99.9 1.4E-23 3.1E-28 175.8 23.4 268 2-298 118-390 (400)
42 KOG2533 Permease of the major 99.9 8.1E-25 1.8E-29 183.6 15.6 273 1-278 152-438 (495)
43 TIGR00891 2A0112 putative sial 99.9 7.2E-24 1.6E-28 178.4 20.9 270 2-281 119-401 (405)
44 PRK11195 lysophospholipid tran 99.9 1.9E-23 4.2E-28 174.6 22.9 279 1-302 106-389 (393)
45 TIGR00711 efflux_EmrB drug res 99.9 1E-23 2.2E-28 181.6 21.9 260 2-270 109-410 (485)
46 PRK15075 citrate-proton sympor 99.9 3E-23 6.6E-28 175.9 23.4 247 2-272 136-396 (434)
47 PRK11902 ampG muropeptide tran 99.9 2.3E-22 4.9E-27 169.0 28.2 270 2-295 113-389 (402)
48 PRK12307 putative sialic acid 99.9 4E-23 8.6E-28 175.1 23.8 259 2-277 125-389 (426)
49 TIGR01299 synapt_SV2 synaptic 99.9 8.6E-23 1.9E-27 179.7 25.9 283 2-296 274-734 (742)
50 TIGR00879 SP MFS transporter, 99.9 7.5E-24 1.6E-28 182.1 18.6 286 2-299 146-473 (481)
51 PRK10504 putative transporter; 99.9 1.6E-22 3.5E-27 173.5 26.7 262 2-272 117-417 (471)
52 PRK09528 lacY galactoside perm 99.9 2.1E-23 4.6E-28 176.3 19.4 265 15-299 137-406 (420)
53 TIGR00887 2A0109 phosphate:H+ 99.9 7.3E-23 1.6E-27 176.6 22.8 286 2-299 134-491 (502)
54 PRK11128 putative 3-phenylprop 99.9 2.1E-22 4.6E-27 168.0 24.8 260 2-290 113-373 (382)
55 PRK05122 major facilitator sup 99.9 2.6E-22 5.6E-27 168.7 25.4 260 2-298 131-391 (399)
56 PRK12382 putative transporter; 99.9 2.8E-22 6E-27 168.1 25.3 259 2-297 131-390 (392)
57 PRK10077 xylE D-xylose transpo 99.9 6.8E-23 1.5E-27 176.3 22.2 286 1-298 138-459 (479)
58 PRK06814 acylglycerophosphoeth 99.9 1.5E-22 3.2E-27 190.6 24.4 269 1-289 126-415 (1140)
59 PRK11043 putative transporter; 99.9 9.2E-22 2E-26 165.4 26.3 242 4-271 115-358 (401)
60 TIGR01272 gluP glucose/galacto 99.9 7.6E-22 1.6E-26 159.1 24.3 257 2-284 29-303 (310)
61 TIGR02718 sider_RhtX_FptX side 99.9 1.5E-21 3.2E-26 163.5 26.9 259 5-291 119-386 (390)
62 cd06174 MFS The Major Facilita 99.9 6.7E-22 1.5E-26 163.2 24.0 243 2-293 106-349 (352)
63 TIGR00895 2A0115 benzoate tran 99.9 2.4E-22 5.2E-27 168.7 21.6 256 2-267 124-397 (398)
64 TIGR00886 2A0108 nitrite extru 99.9 1E-22 2.3E-27 169.1 18.5 244 2-256 109-365 (366)
65 TIGR00901 2A0125 AmpG-related 99.9 5.9E-22 1.3E-26 164.0 22.5 230 2-254 102-355 (356)
66 KOG2504 Monocarboxylate transp 99.9 2.2E-22 4.8E-27 170.6 19.9 286 2-296 154-476 (509)
67 PF05977 MFS_3: Transmembrane 99.9 1.9E-21 4.1E-26 165.8 25.3 271 2-295 122-393 (524)
68 PRK10473 multidrug efflux syst 99.9 1.9E-21 4.1E-26 163.1 24.9 240 2-272 110-351 (392)
69 PRK15403 multidrug efflux syst 99.9 5E-21 1.1E-25 161.1 26.9 264 4-287 125-388 (413)
70 PRK11652 emrD multidrug resist 99.9 8.3E-21 1.8E-25 159.3 27.6 243 3-270 116-360 (394)
71 PRK10054 putative transporter; 99.9 1.5E-21 3.2E-26 163.4 22.9 263 2-293 115-381 (395)
72 TIGR00898 2A0119 cation transp 99.9 1.2E-21 2.7E-26 169.5 22.7 275 2-296 199-495 (505)
73 PRK03893 putative sialic acid 99.9 5.2E-22 1.1E-26 171.5 19.6 275 2-287 127-444 (496)
74 TIGR00896 CynX cyanate transpo 99.9 1.5E-21 3.3E-26 161.5 21.2 243 3-275 107-353 (355)
75 COG2807 CynX Cyanate permease 99.9 4.4E-21 9.5E-26 150.2 21.5 264 5-298 121-387 (395)
76 PRK03633 putative MFS family t 99.9 1.7E-20 3.6E-25 156.6 25.4 257 2-294 113-370 (381)
77 PRK10133 L-fucose transporter; 99.9 1.4E-20 3.1E-25 159.2 24.7 265 2-291 136-428 (438)
78 TIGR00882 2A0105 oligosacchari 99.9 3.6E-21 7.9E-26 161.5 21.0 258 16-293 130-392 (396)
79 PRK08633 2-acyl-glycerophospho 99.9 6.5E-21 1.4E-25 180.1 24.4 269 2-287 122-401 (1146)
80 TIGR00792 gph sugar (Glycoside 99.9 1E-20 2.2E-25 161.0 21.5 245 5-272 121-382 (437)
81 KOG0569 Permease of the major 99.9 9.5E-20 2.1E-24 151.4 23.2 284 4-300 137-458 (485)
82 PF11700 ATG22: Vacuole efflux 99.9 6.5E-19 1.4E-23 148.8 27.4 278 5-298 148-470 (477)
83 TIGR00889 2A0110 nucleoside tr 99.9 2.6E-19 5.6E-24 150.8 23.8 246 29-298 140-404 (418)
84 TIGR00885 fucP L-fucose:H+ sym 99.9 5.7E-19 1.2E-23 148.2 23.9 259 2-287 113-403 (410)
85 TIGR00924 yjdL_sub1_fam amino 99.8 6.2E-18 1.3E-22 144.4 23.4 292 2-297 121-469 (475)
86 KOG3764 Vesicular amine transp 99.8 1.7E-19 3.6E-24 142.7 12.6 269 2-296 178-454 (464)
87 TIGR00805 oat sodium-independe 99.8 2.3E-18 5.1E-23 151.1 20.2 176 1-177 190-397 (633)
88 KOG1330 Sugar transporter/spin 99.8 2.3E-20 5E-25 150.5 6.0 268 2-275 140-417 (493)
89 COG0738 FucP Fucose permease [ 99.8 1.1E-17 2.4E-22 133.2 19.2 261 3-290 124-403 (422)
90 PRK10207 dipeptide/tripeptide 99.8 6E-17 1.3E-21 138.5 22.9 288 2-294 124-474 (489)
91 PF13347 MFS_2: MFS/sugar tran 99.8 3.6E-17 7.8E-22 138.6 20.4 245 4-272 124-386 (428)
92 KOG0253 Synaptic vesicle trans 99.8 3E-17 6.5E-22 128.8 18.1 285 2-300 184-523 (528)
93 PRK09669 putative symporter Ya 99.8 2.6E-16 5.5E-21 134.1 23.3 242 5-272 131-390 (444)
94 KOG4686 Predicted sugar transp 99.8 9.4E-17 2E-21 121.8 17.3 273 3-298 156-445 (459)
95 COG2270 Permeases of the major 99.7 3.9E-16 8.4E-21 125.3 18.8 276 5-298 137-431 (438)
96 PF01306 LacY_symp: LacY proto 99.7 8.8E-16 1.9E-20 125.6 20.2 263 17-299 136-403 (412)
97 PF03825 Nuc_H_symport: Nucleo 99.7 4E-15 8.6E-20 123.7 24.5 260 17-299 123-398 (400)
98 TIGR01301 GPH_sucrose GPH fami 99.7 2.2E-15 4.7E-20 126.9 22.8 283 3-299 134-474 (477)
99 PF03209 PUCC: PUCC protein; 99.7 8.6E-15 1.9E-19 117.9 23.8 275 4-299 110-401 (403)
100 COG2211 MelB Na+/melibiose sym 99.7 3.4E-15 7.3E-20 123.4 21.9 246 6-272 135-398 (467)
101 KOG2615 Permease of the major 99.7 2.9E-16 6.2E-21 123.9 14.7 259 3-271 140-415 (451)
102 PRK09848 glucuronide transport 99.7 5E-15 1.1E-19 126.4 23.5 161 103-272 220-390 (448)
103 PF06609 TRI12: Fungal trichot 99.7 6.3E-15 1.4E-19 126.0 23.0 255 6-268 153-465 (599)
104 COG2271 UhpC Sugar phosphate p 99.7 5.8E-16 1.3E-20 124.2 14.7 179 112-301 30-211 (448)
105 PRK11663 regulatory protein Uh 99.7 5.1E-15 1.1E-19 125.7 19.4 170 112-292 24-194 (434)
106 PRK10054 putative transporter; 99.7 4.3E-15 9.3E-20 124.5 18.4 172 111-293 7-179 (395)
107 PRK10429 melibiose:sodium symp 99.7 1.4E-14 3E-19 124.3 21.8 248 4-272 127-395 (473)
108 TIGR00788 fbt folate/biopterin 99.7 2.8E-15 6.1E-20 127.9 15.7 257 3-272 140-415 (468)
109 PRK11462 putative transporter; 99.7 6.4E-14 1.4E-18 119.5 23.4 241 6-272 132-389 (460)
110 TIGR00924 yjdL_sub1_fam amino 99.7 7.1E-15 1.5E-19 125.8 17.5 176 109-294 7-190 (475)
111 PRK09584 tppB putative tripept 99.7 8.1E-14 1.8E-18 120.0 23.4 285 2-293 131-476 (500)
112 PF00083 Sugar_tr: Sugar (and 99.7 7E-20 1.5E-24 156.4 -14.0 285 2-300 121-440 (451)
113 KOG0254 Predicted transporter 99.6 3.1E-14 6.7E-19 123.3 19.7 284 4-300 163-487 (513)
114 PRK09584 tppB putative tripept 99.6 3.8E-14 8.3E-19 122.0 19.7 178 105-292 14-197 (500)
115 PRK11646 multidrug resistance 99.6 3.6E-14 7.8E-19 119.2 19.0 171 114-295 13-184 (400)
116 PTZ00207 hypothetical protein; 99.6 6.6E-14 1.4E-18 120.5 19.6 296 2-300 139-556 (591)
117 PRK10489 enterobactin exporter 99.6 2.6E-14 5.6E-19 120.9 16.3 182 103-295 9-196 (417)
118 PRK15462 dipeptide/tripeptide 99.6 5E-14 1.1E-18 119.2 17.2 174 111-294 9-187 (493)
119 PRK10504 putative transporter; 99.6 9.7E-14 2.1E-18 119.4 19.3 174 111-295 10-184 (471)
120 PRK03545 putative arabinose tr 99.6 1.1E-13 2.3E-18 116.2 18.3 171 113-294 11-182 (390)
121 KOG0252 Inorganic phosphate tr 99.6 2.7E-15 5.8E-20 121.3 7.6 284 1-296 162-498 (538)
122 TIGR00900 2A0121 H+ Antiporter 99.6 1.1E-13 2.3E-18 115.0 17.4 170 115-295 3-178 (365)
123 KOG0255 Synaptic vesicle trans 99.6 1.6E-12 3.5E-17 113.1 25.3 250 3-269 191-467 (521)
124 PRK10091 MFS transport protein 99.6 1.9E-13 4.1E-18 114.3 18.6 172 111-293 3-175 (382)
125 PRK10213 nepI ribonucleoside t 99.6 3.3E-13 7.1E-18 113.2 20.0 155 126-291 35-190 (394)
126 TIGR02332 HpaX 4-hydroxyphenyl 99.6 2E-13 4.4E-18 115.1 18.8 173 114-297 11-190 (412)
127 KOG2563 Permease of the major 99.6 1.7E-14 3.6E-19 116.7 11.1 272 6-296 163-450 (480)
128 TIGR00710 efflux_Bcr_CflA drug 99.6 1.6E-13 3.4E-18 114.9 17.5 166 120-296 14-180 (385)
129 PF07690 MFS_1: Major Facilita 99.6 1.4E-13 3.1E-18 113.7 16.6 165 117-291 2-167 (352)
130 COG2814 AraJ Arabinose efflux 99.6 4.2E-13 9.1E-18 108.9 18.4 176 111-297 13-189 (394)
131 PRK10207 dipeptide/tripeptide 99.6 3.6E-13 7.8E-18 115.5 18.6 174 111-294 14-192 (489)
132 TIGR00890 2A0111 Oxalate/Forma 99.6 1.5E-13 3.3E-18 114.5 16.1 168 117-295 9-176 (377)
133 TIGR00712 glpT glycerol-3-phos 99.6 3.2E-13 6.9E-18 115.0 17.9 174 111-295 27-205 (438)
134 PRK03699 putative transporter; 99.6 6.7E-13 1.4E-17 111.5 19.2 171 113-293 9-180 (394)
135 PRK14995 methyl viologen resis 99.6 8.9E-13 1.9E-17 113.9 20.1 173 113-296 8-182 (495)
136 TIGR00806 rfc RFC reduced fola 99.6 1E-12 2.2E-17 108.8 19.2 280 3-290 134-442 (511)
137 PRK11551 putative 3-hydroxyphe 99.6 6.8E-13 1.5E-17 112.0 19.0 169 115-294 19-188 (406)
138 TIGR00711 efflux_EmrB drug res 99.6 3.2E-13 7E-18 116.6 17.2 170 115-295 6-176 (485)
139 PRK05122 major facilitator sup 99.6 3.1E-13 6.8E-18 113.7 16.7 170 110-289 14-192 (399)
140 TIGR00893 2A0114 d-galactonate 99.6 1.9E-13 4.1E-18 114.7 15.3 157 128-295 11-168 (399)
141 TIGR00899 2A0120 sugar efflux 99.5 4.8E-13 1E-17 111.6 17.4 168 118-294 4-174 (375)
142 PRK10473 multidrug efflux syst 99.5 1E-12 2.2E-17 110.4 19.4 172 114-296 6-178 (392)
143 TIGR01299 synapt_SV2 synaptic 99.5 5E-13 1.1E-17 118.5 18.0 154 130-293 186-352 (742)
144 TIGR00903 2A0129 major facilit 99.5 6.9E-13 1.5E-17 109.8 17.5 163 124-298 4-167 (368)
145 PRK15462 dipeptide/tripeptide 99.5 9.3E-12 2E-16 105.6 24.4 280 2-288 119-469 (493)
146 PRK11043 putative transporter; 99.5 1.4E-12 3E-17 109.9 19.4 165 123-297 15-182 (401)
147 PRK09528 lacY galactoside perm 99.5 4.9E-13 1.1E-17 113.3 16.5 180 106-296 5-191 (420)
148 PRK11195 lysophospholipid tran 99.5 8.9E-13 1.9E-17 110.5 17.9 171 110-295 2-173 (393)
149 TIGR00895 2A0115 benzoate tran 99.5 3.2E-13 7E-18 113.4 14.4 159 124-293 30-189 (398)
150 PRK12382 putative transporter; 99.5 1.4E-12 3E-17 109.6 18.1 165 110-284 14-187 (392)
151 PRK15011 sugar efflux transpor 99.5 2.5E-12 5.4E-17 108.0 19.6 176 110-295 14-193 (393)
152 TIGR00891 2A0112 putative sial 99.5 1.6E-12 3.6E-17 109.5 18.6 168 113-290 14-183 (405)
153 PLN00028 nitrate transmembrane 99.5 1.3E-12 2.9E-17 112.1 17.9 162 124-296 49-219 (476)
154 TIGR00886 2A0108 nitrite extru 99.5 1.8E-12 3.8E-17 107.9 17.9 166 112-287 2-179 (366)
155 cd06174 MFS The Major Facilita 99.5 8E-13 1.7E-17 109.1 15.8 168 115-293 3-171 (352)
156 PRK09705 cynX putative cyanate 99.5 1.9E-12 4.1E-17 108.6 17.8 155 128-292 26-180 (393)
157 PRK11102 bicyclomycin/multidru 99.5 1.4E-12 3.1E-17 108.9 16.8 159 126-295 6-165 (377)
158 TIGR00881 2A0104 phosphoglycer 99.5 2.8E-13 6.1E-18 113.0 12.0 165 120-295 4-170 (379)
159 PRK15402 multidrug efflux syst 99.5 2.9E-12 6.4E-17 108.1 18.1 159 127-296 29-188 (406)
160 PRK09874 drug efflux system pr 99.5 2.9E-12 6.2E-17 108.2 17.6 172 112-295 15-192 (408)
161 PRK11652 emrD multidrug resist 99.5 4.6E-12 1E-16 106.5 18.7 169 116-295 13-182 (394)
162 PF03137 OATP: Organic Anion T 99.5 4.2E-15 9E-20 127.6 0.0 268 1-271 159-515 (539)
163 PRK03633 putative MFS family t 99.5 5.1E-12 1.1E-16 105.7 18.4 150 111-270 6-156 (381)
164 PRK09556 uhpT sugar phosphate 99.5 9.7E-13 2.1E-17 112.9 14.1 160 126-295 44-211 (467)
165 PRK15403 multidrug efflux syst 99.5 7.1E-12 1.5E-16 105.8 18.9 153 131-294 36-189 (413)
166 PRK03893 putative sialic acid 99.5 7.8E-12 1.7E-16 108.4 19.2 163 113-286 22-185 (496)
167 PRK11273 glpT sn-glycerol-3-ph 99.5 1.2E-11 2.6E-16 105.8 20.0 153 131-295 49-207 (452)
168 TIGR00897 2A0118 polyol permea 99.5 1E-11 2.2E-16 104.6 18.9 162 111-283 13-180 (402)
169 PRK12307 putative sialic acid 99.5 6.5E-12 1.4E-16 106.7 17.7 161 113-284 20-181 (426)
170 TIGR00902 2A0127 phenyl propri 99.5 8.7E-12 1.9E-16 104.3 17.7 165 113-287 6-170 (382)
171 PRK15034 nitrate/nitrite trans 99.4 1.2E-11 2.6E-16 103.8 18.0 178 111-298 34-234 (462)
172 TIGR00892 2A0113 monocarboxyla 99.4 4.6E-12 1E-16 108.2 15.7 155 130-295 38-193 (455)
173 TIGR00882 2A0105 oligosacchari 99.4 6.8E-12 1.5E-16 105.5 16.4 176 110-295 1-182 (396)
174 PF05977 MFS_3: Transmembrane 99.4 1.5E-11 3.2E-16 105.7 17.7 186 106-297 5-191 (524)
175 PRK11128 putative 3-phenylprop 99.4 1.5E-11 3.3E-16 102.9 17.2 161 120-290 13-173 (382)
176 KOG2816 Predicted transporter 99.4 5.2E-12 1.1E-16 106.2 13.8 258 3-270 132-392 (463)
177 TIGR00806 rfc RFC reduced fola 99.4 3.2E-11 6.9E-16 100.0 17.8 159 131-300 45-207 (511)
178 KOG3626 Organic anion transpor 99.4 1.2E-11 2.6E-16 107.2 15.8 177 1-177 255-459 (735)
179 PRK11902 ampG muropeptide tran 99.4 6.7E-11 1.5E-15 99.7 18.7 167 116-293 4-179 (402)
180 TIGR00885 fucP L-fucose:H+ sym 99.4 8.7E-11 1.9E-15 98.9 19.2 170 113-292 5-203 (410)
181 TIGR00896 CynX cyanate transpo 99.4 2E-11 4.3E-16 101.2 14.1 148 130-288 19-167 (355)
182 PRK10133 L-fucose transporter; 99.4 1.7E-10 3.6E-15 98.1 19.4 147 112-268 27-177 (438)
183 PRK11010 ampG muropeptide tran 99.3 2E-10 4.4E-15 99.0 19.9 179 106-295 7-194 (491)
184 PRK06814 acylglycerophosphoeth 99.3 8.7E-11 1.9E-15 111.6 19.2 184 105-295 5-194 (1140)
185 TIGR00879 SP MFS transporter, 99.3 6.8E-11 1.5E-15 101.8 16.5 139 146-294 70-215 (481)
186 TIGR01301 GPH_sucrose GPH fami 99.3 1.8E-10 3.9E-15 97.5 18.4 178 113-299 6-221 (477)
187 TIGR00880 2_A_01_02 Multidrug 99.3 3.1E-11 6.7E-16 85.8 11.9 135 153-297 4-139 (141)
188 KOG1330 Sugar transporter/spin 99.3 6.8E-13 1.5E-17 107.9 3.4 177 113-299 35-212 (493)
189 COG2223 NarK Nitrate/nitrite t 99.3 1.3E-10 2.8E-15 93.9 14.5 175 112-298 15-195 (417)
190 TIGR00792 gph sugar (Glycoside 99.3 1.7E-10 3.7E-15 98.4 16.4 172 122-297 10-195 (437)
191 TIGR00894 2A0114euk Na(+)-depe 99.3 4.7E-11 1E-15 102.6 13.0 147 141-296 70-219 (465)
192 TIGR00901 2A0125 AmpG-related 99.3 2.7E-10 5.9E-15 94.4 16.8 162 130-297 7-179 (356)
193 PF06609 TRI12: Fungal trichot 99.3 2.9E-10 6.2E-15 97.9 17.0 175 108-295 37-216 (599)
194 COG3104 PTR2 Dipeptide/tripept 99.3 8.1E-11 1.7E-15 97.2 12.2 183 105-297 14-207 (498)
195 TIGR00805 oat sodium-independe 99.3 6.7E-11 1.5E-15 104.5 12.4 155 132-296 54-281 (633)
196 PF01306 LacY_symp: LacY proto 99.3 1.1E-10 2.5E-15 95.9 12.7 177 108-296 4-188 (412)
197 PRK08633 2-acyl-glycerophospho 99.3 5.4E-10 1.2E-14 106.5 19.1 156 106-270 4-165 (1146)
198 PTZ00207 hypothetical protein; 99.3 1E-09 2.3E-14 95.0 18.8 158 126-296 42-205 (591)
199 PRK10077 xylE D-xylose transpo 99.3 3.3E-10 7.1E-15 97.8 16.0 144 143-296 51-215 (479)
200 KOG3764 Vesicular amine transp 99.2 3.4E-11 7.4E-16 96.2 8.5 147 142-298 101-249 (464)
201 PRK10406 alpha-ketoglutarate t 99.2 2.4E-09 5.2E-14 91.2 20.0 161 118-289 29-212 (432)
202 PF03092 BT1: BT1 family; Int 99.2 2E-10 4.2E-15 97.1 12.3 282 6-299 109-416 (433)
203 PRK09952 shikimate transporter 99.2 3.4E-09 7.3E-14 90.4 19.3 163 114-287 25-211 (438)
204 TIGR00887 2A0109 phosphate:H+ 99.2 3E-09 6.6E-14 92.3 19.2 139 144-291 53-220 (502)
205 PRK10642 proline/glycine betai 99.2 2.4E-09 5.1E-14 92.6 18.1 165 114-289 19-206 (490)
206 TIGR02718 sider_RhtX_FptX side 99.2 6.6E-09 1.4E-13 87.3 20.0 175 113-296 3-184 (390)
207 COG3104 PTR2 Dipeptide/tripept 99.2 2.9E-09 6.3E-14 88.2 17.1 287 2-294 136-485 (498)
208 PRK15075 citrate-proton sympor 99.2 3E-09 6.5E-14 90.6 17.7 160 113-283 17-199 (434)
209 PRK09669 putative symporter Ya 99.2 2.1E-09 4.5E-14 91.9 16.6 175 117-295 15-203 (444)
210 TIGR00898 2A0119 cation transp 99.2 3.7E-10 8.1E-15 98.1 12.0 149 133-295 111-263 (505)
211 PRK11462 putative transporter; 99.1 6.5E-09 1.4E-13 89.0 17.8 174 117-294 15-202 (460)
212 KOG2532 Permease of the major 99.1 1.3E-09 2.8E-14 92.3 12.0 149 141-299 67-219 (466)
213 KOG2615 Permease of the major 99.1 1E-09 2.2E-14 87.5 10.3 125 144-278 65-193 (451)
214 TIGR00889 2A0110 nucleoside tr 99.1 7.5E-09 1.6E-13 87.6 15.7 163 115-293 6-177 (418)
215 PRK10429 melibiose:sodium symp 99.1 1.2E-08 2.6E-13 87.9 16.8 171 116-294 11-199 (473)
216 PF13347 MFS_2: MFS/sugar tran 99.1 4.8E-09 1.1E-13 89.2 14.3 170 121-298 11-200 (428)
217 COG0738 FucP Fucose permease [ 99.0 4.5E-08 9.8E-13 79.1 17.7 158 130-296 31-210 (422)
218 TIGR00788 fbt folate/biopterin 99.0 1.9E-08 4.2E-13 86.2 15.5 177 113-296 28-209 (468)
219 PF03825 Nuc_H_symport: Nucleo 98.9 7.3E-08 1.6E-12 80.6 16.3 139 115-263 6-144 (400)
220 KOG2504 Monocarboxylate transp 98.9 1.2E-08 2.6E-13 87.5 11.6 173 114-297 45-222 (509)
221 COG2807 CynX Cyanate permease 98.9 1.8E-07 3.9E-12 74.6 17.0 156 129-295 30-185 (395)
222 TIGR00883 2A0106 metabolite-pr 98.9 1.5E-07 3.3E-12 79.0 17.1 124 158-291 46-186 (394)
223 PF06963 FPN1: Ferroportin1 (F 98.9 1.4E-07 2.9E-12 78.9 16.0 247 13-264 143-412 (432)
224 COG2211 MelB Na+/melibiose sym 98.9 2.8E-07 6.1E-12 77.1 16.4 180 115-298 16-209 (467)
225 PRK09848 glucuronide transport 98.8 3.9E-07 8.4E-12 78.1 17.5 145 117-265 14-172 (448)
226 KOG0254 Predicted transporter 98.8 2.6E-07 5.6E-12 80.5 16.5 134 148-291 90-225 (513)
227 KOG2533 Permease of the major 98.8 5.4E-08 1.2E-12 82.9 11.7 148 140-297 74-228 (495)
228 PF01770 Folate_carrier: Reduc 98.8 2E-06 4.3E-11 70.9 19.9 247 5-259 115-391 (412)
229 KOG3810 Micronutrient transpor 98.8 4.5E-07 9.8E-12 71.8 15.0 280 5-296 116-421 (433)
230 KOG0255 Synaptic vesicle trans 98.8 1.3E-07 2.8E-12 82.6 13.3 140 140-292 111-251 (521)
231 KOG0569 Permease of the major 98.8 8.8E-07 1.9E-11 74.8 16.3 141 150-296 63-205 (485)
232 KOG2325 Predicted transporter/ 98.7 1.3E-07 2.7E-12 79.4 11.0 275 6-295 152-474 (488)
233 PF06813 Nodulin-like: Nodulin 98.7 1.2E-06 2.6E-11 67.8 14.4 136 124-270 15-157 (250)
234 KOG3762 Predicted transporter 98.7 9.3E-07 2E-11 74.1 13.5 179 106-295 366-546 (618)
235 PF05631 DUF791: Protein of un 98.6 3.8E-05 8.3E-10 61.9 19.7 160 124-294 47-214 (354)
236 PF07672 MFS_Mycoplasma: Mycop 98.5 4.8E-06 1E-10 63.7 13.6 239 15-268 2-266 (267)
237 TIGR00769 AAA ADP/ATP carrier 98.5 0.00022 4.8E-09 60.7 24.0 167 5-177 151-333 (472)
238 TIGR00880 2_A_01_02 Multidrug 98.5 3.3E-07 7.2E-12 64.8 5.6 71 2-72 70-140 (141)
239 PF11700 ATG22: Vacuole efflux 98.5 3.6E-05 7.8E-10 66.0 18.4 142 150-299 73-250 (477)
240 PF12832 MFS_1_like: MFS_1 lik 98.4 1.6E-06 3.5E-11 54.0 7.3 63 115-178 4-66 (77)
241 PF03092 BT1: BT1 family; Int 98.4 1.3E-05 2.8E-10 68.1 13.8 158 134-297 12-176 (433)
242 TIGR00926 2A1704 Peptide:H+ sy 98.4 1.8E-05 3.8E-10 70.3 14.9 163 126-296 2-182 (654)
243 KOG2325 Predicted transporter/ 98.3 1.4E-05 3.1E-10 67.4 12.7 177 113-298 36-231 (488)
244 PF00083 Sugar_tr: Sugar (and 98.3 1.7E-08 3.6E-13 86.6 -5.9 136 148-292 47-188 (451)
245 PF02487 CLN3: CLN3 protein; 98.3 0.00024 5.2E-09 58.9 18.3 237 19-267 143-394 (402)
246 KOG0252 Inorganic phosphate tr 98.2 7.7E-06 1.7E-10 67.5 8.4 112 144-262 81-198 (538)
247 KOG0253 Synaptic vesicle trans 98.2 9.4E-05 2E-09 59.8 13.8 150 131-292 97-247 (528)
248 PF03219 TLC: TLC ATP/ADP tran 98.2 0.0003 6.5E-09 60.3 17.1 167 6-177 167-349 (491)
249 PF03209 PUCC: PUCC protein; 98.1 0.00034 7.5E-09 57.5 15.7 131 140-272 8-153 (403)
250 KOG2816 Predicted transporter 98.0 0.00017 3.7E-09 61.4 13.5 130 157-299 72-202 (463)
251 KOG2563 Permease of the major 97.9 0.00035 7.7E-09 57.9 12.7 126 135-271 68-203 (480)
252 KOG3098 Uncharacterized conser 97.9 0.0047 1E-07 52.3 18.6 246 4-266 123-410 (461)
253 PF05631 DUF791: Protein of un 97.9 0.0013 2.8E-08 53.3 14.6 146 12-173 155-304 (354)
254 PRK03612 spermidine synthase; 97.8 0.0028 6.1E-08 55.2 17.6 160 116-281 19-183 (521)
255 KOG0637 Sucrose transporter an 97.8 7.5E-05 1.6E-09 61.8 6.4 263 4-287 163-487 (498)
256 KOG3574 Acetyl-CoA transporter 97.7 0.0035 7.6E-08 51.1 14.3 245 11-271 161-432 (510)
257 TIGR00769 AAA ADP/ATP carrier 97.7 0.0065 1.4E-07 52.0 16.6 148 112-268 8-189 (472)
258 KOG0637 Sucrose transporter an 97.6 0.00011 2.3E-09 61.0 5.3 152 111-267 32-202 (498)
259 COG2270 Permeases of the major 97.6 0.0012 2.5E-08 54.6 11.2 159 130-297 34-221 (438)
260 COG3202 ATP/ADP translocase [E 97.6 0.035 7.5E-07 47.1 20.3 165 7-176 172-351 (509)
261 TIGR00926 2A1704 Peptide:H+ sy 97.5 0.0065 1.4E-07 54.4 14.9 66 2-67 104-179 (654)
262 PF13000 Acatn: Acetyl-coenzym 97.5 0.022 4.8E-07 48.4 16.7 254 12-270 147-467 (544)
263 PF01770 Folate_carrier: Reduc 97.5 0.012 2.6E-07 49.2 15.1 161 130-300 22-186 (412)
264 PF06779 DUF1228: Protein of u 97.4 0.0015 3.2E-08 41.2 7.3 77 124-210 5-81 (85)
265 PF06963 FPN1: Ferroportin1 (F 97.4 0.055 1.2E-06 46.0 18.6 178 112-292 3-196 (432)
266 COG0477 ProP Permeases of the 97.4 0.039 8.4E-07 44.2 17.7 147 129-285 20-174 (338)
267 PF00854 PTR2: POT family; In 97.2 0.00087 1.9E-08 56.1 6.1 64 2-65 52-118 (372)
268 TIGR01272 gluP glucose/galacto 97.1 0.0061 1.3E-07 49.6 9.9 88 208-295 9-112 (310)
269 PF05978 UNC-93: Ion channel r 96.9 0.08 1.7E-06 38.0 14.2 108 152-269 42-150 (156)
270 KOG3626 Organic anion transpor 96.9 0.014 3.1E-07 52.1 11.2 162 129-299 114-346 (735)
271 KOG3762 Predicted transporter 96.7 0.0029 6.2E-08 54.0 4.6 67 1-67 477-544 (618)
272 TIGR00939 2a57 Equilibrative N 96.4 0.42 9.1E-06 41.0 15.9 56 208-263 371-427 (437)
273 PF03137 OATP: Organic Anion T 96.3 0.00058 1.3E-08 59.7 -1.4 165 125-298 16-252 (539)
274 PF00854 PTR2: POT family; In 96.3 0.092 2E-06 44.0 11.4 84 211-295 35-122 (372)
275 KOG1479 Nucleoside transporter 96.2 0.056 1.2E-06 45.0 9.4 134 132-267 264-401 (406)
276 KOG4686 Predicted sugar transp 96.2 0.0012 2.6E-08 51.6 -0.1 153 112-272 42-200 (459)
277 KOG4332 Predicted sugar transp 95.9 0.67 1.5E-05 36.6 16.3 179 104-291 241-426 (454)
278 KOG3880 Predicted small molecu 95.6 0.097 2.1E-06 41.8 8.1 63 203-265 336-399 (409)
279 KOG1237 H+/oligopeptide sympor 94.8 0.92 2E-05 40.3 12.7 171 115-294 41-243 (571)
280 KOG1479 Nucleoside transporter 94.7 2.3 5E-05 35.8 14.9 179 113-295 20-203 (406)
281 PF02487 CLN3: CLN3 protein; 93.9 2.8 6.1E-05 35.4 12.9 126 152-291 64-190 (402)
282 PF07857 DUF1632: CEO family ( 93.7 0.99 2.1E-05 35.3 9.4 26 117-142 184-209 (254)
283 PF01733 Nucleoside_tran: Nucl 93.5 0.023 5E-07 46.2 0.3 55 210-264 249-304 (309)
284 KOG3574 Acetyl-CoA transporter 92.9 2.6 5.6E-05 35.2 10.8 65 111-179 31-100 (510)
285 KOG4332 Predicted sugar transp 92.9 0.33 7.1E-06 38.2 5.5 43 137-179 62-104 (454)
286 PF06813 Nodulin-like: Nodulin 92.1 0.49 1.1E-05 37.1 5.8 66 8-75 121-186 (250)
287 KOG1237 H+/oligopeptide sympor 91.0 11 0.00024 33.7 17.5 64 2-65 171-240 (571)
288 PF02990 EMP70: Endomembrane p 89.7 3.3 7.1E-05 36.6 9.2 35 145-179 291-329 (521)
289 KOG2601 Iron transporter [Inor 88.6 14 0.00029 31.1 11.5 170 111-287 27-217 (503)
290 TIGR00939 2a57 Equilibrative N 88.5 15 0.00033 31.7 13.9 27 215-241 112-138 (437)
291 COG0477 ProP Permeases of the 88.4 1 2.3E-05 35.8 5.2 60 2-61 113-176 (338)
292 KOG3098 Uncharacterized conser 87.5 13 0.00028 32.2 11.0 110 149-268 51-162 (461)
293 COG5336 Uncharacterized protei 77.6 17 0.00037 24.1 6.1 32 240-271 38-69 (116)
294 PF12832 MFS_1_like: MFS_1 lik 75.5 16 0.00036 22.5 7.3 40 241-280 32-71 (77)
295 PF13000 Acatn: Acetyl-coenzym 72.5 69 0.0015 28.3 10.4 67 114-180 3-73 (544)
296 KOG4830 Predicted sugar transp 65.9 29 0.00063 27.6 6.1 67 100-166 190-256 (412)
297 PF05255 UPF0220: Uncharacteri 62.9 58 0.0013 23.8 8.2 57 10-66 13-75 (166)
298 PF11947 DUF3464: Protein of u 59.0 45 0.00098 23.9 5.7 30 231-260 116-146 (153)
299 PF04024 PspC: PspC domain; I 58.3 30 0.00065 20.3 4.0 28 48-75 31-61 (61)
300 COG4262 Predicted spermidine s 58.2 1.1E+02 0.0025 25.7 14.5 131 134-268 30-163 (508)
301 PF10183 ESSS: ESSS subunit of 58.2 15 0.00032 24.5 3.0 31 44-74 55-85 (105)
302 KOG1278 Endosomal membrane pro 56.9 15 0.00032 32.3 3.5 31 144-174 356-386 (628)
303 PF11368 DUF3169: Protein of u 55.8 93 0.002 24.5 7.7 25 18-42 9-33 (248)
304 PF03596 Cad: Cadmium resistan 53.1 96 0.0021 23.3 7.1 29 36-64 43-71 (191)
305 PF11511 RhodobacterPufX: Intr 52.9 48 0.001 19.8 4.1 32 47-78 29-60 (67)
306 PF02694 UPF0060: Uncharacteri 52.9 19 0.00041 23.8 2.8 33 147-179 54-86 (107)
307 KOG1277 Endosomal membrane pro 49.5 45 0.00097 28.7 5.1 30 150-179 326-359 (593)
308 PRK10263 DNA translocase FtsK; 48.5 3E+02 0.0066 27.9 10.8 18 255-272 142-159 (1355)
309 PRK02237 hypothetical protein; 46.5 34 0.00075 22.7 3.2 34 147-180 56-89 (109)
310 PF04226 Transgly_assoc: Trans 45.1 54 0.0012 18.1 5.0 35 34-68 6-44 (48)
311 PF03741 TerC: Integral membra 41.7 1.5E+02 0.0032 22.2 13.8 52 4-57 17-68 (183)
312 TIGR02978 phageshock_pspC phag 41.6 89 0.0019 21.5 4.8 14 63-76 51-64 (121)
313 PRK03612 spermidine synthase; 41.3 78 0.0017 28.2 5.8 49 17-65 143-192 (521)
314 COG3162 Predicted membrane pro 41.1 1E+02 0.0022 20.2 5.1 38 103-140 14-53 (102)
315 COG1983 PspC Putative stress-r 40.8 76 0.0016 19.3 3.8 35 41-75 20-65 (70)
316 PF14362 DUF4407: Domain of un 40.3 1.3E+02 0.0027 24.6 6.5 37 13-49 8-44 (301)
317 PRK10995 inner membrane protei 39.8 1.8E+02 0.0038 22.5 7.9 29 33-61 56-85 (221)
318 PF12273 RCR: Chitin synthesis 39.7 20 0.00043 24.9 1.6 15 49-63 1-15 (130)
319 PF03219 TLC: TLC ATP/ADP tran 38.6 2.9E+02 0.0062 24.6 24.5 34 143-176 172-205 (491)
320 KOG4830 Predicted sugar transp 38.5 60 0.0013 26.0 4.0 62 116-178 22-92 (412)
321 COG1457 CodB Purine-cytosine p 38.0 2.8E+02 0.006 24.3 18.2 145 9-175 11-156 (442)
322 PF03616 Glt_symporter: Sodium 36.9 2.6E+02 0.0057 23.7 12.2 24 157-180 250-273 (368)
323 COG2095 MarC Multiple antibiot 35.6 2E+02 0.0043 21.9 7.1 50 8-57 30-80 (203)
324 PRK13629 threonine/serine tran 34.9 3.1E+02 0.0067 24.0 14.1 41 14-59 19-59 (443)
325 PRK11111 hypothetical protein; 34.8 2.1E+02 0.0046 22.0 7.0 48 10-57 35-83 (214)
326 PF06779 DUF1228: Protein of u 33.7 1.3E+02 0.0028 19.2 5.6 40 21-60 29-68 (85)
327 KOG2881 Predicted membrane pro 33.3 2.5E+02 0.0054 22.4 11.2 21 109-129 205-225 (294)
328 KOG3880 Predicted small molecu 33.2 1.1E+02 0.0025 25.3 4.9 137 149-298 64-202 (409)
329 COG5336 Uncharacterized protei 31.2 1.7E+02 0.0036 19.7 6.3 52 14-65 37-90 (116)
330 PF11151 DUF2929: Protein of u 30.0 1.2E+02 0.0025 17.6 4.9 34 30-63 13-46 (57)
331 COG1585 Membrane protein impli 29.8 1.8E+02 0.0038 20.6 5.0 28 45-72 44-71 (140)
332 PRK10697 DNA-binding transcrip 29.0 1.3E+02 0.0028 20.6 4.0 17 60-76 53-69 (118)
333 TIGR03717 R_switched_YjbE inte 29.0 2.4E+02 0.0053 20.9 7.4 39 6-44 21-59 (176)
334 PF11299 DUF3100: Protein of u 28.9 57 0.0012 25.3 2.5 43 222-264 184-226 (241)
335 PTZ00370 STEVOR; Provisional 28.9 1E+02 0.0022 24.7 3.9 27 273-299 256-282 (296)
336 PF07760 DUF1616: Protein of u 28.6 3.2E+02 0.0069 22.1 7.0 45 3-48 38-82 (287)
337 PHA03231 glycoprotein BALF4; P 28.6 89 0.0019 29.4 4.1 23 246-268 676-698 (829)
338 COG1288 Predicted membrane pro 28.0 4.1E+02 0.0089 23.2 8.6 33 45-77 215-248 (481)
339 PF05545 FixQ: Cbb3-type cytoc 27.9 96 0.0021 17.1 2.8 22 278-299 14-35 (49)
340 PF04281 Tom22: Mitochondrial 27.7 2.2E+02 0.0049 20.1 5.2 27 8-34 60-86 (137)
341 KOG2601 Iron transporter [Inor 27.4 2.2E+02 0.0048 24.4 5.7 47 15-61 171-217 (503)
342 PF15061 DUF4538: Domain of un 27.3 1.4E+02 0.0029 17.4 3.7 21 47-67 4-24 (58)
343 PF13073 DUF3937: Protein of u 26.9 1.4E+02 0.0031 17.6 3.5 36 108-143 2-37 (73)
344 PF02554 CstA: Carbon starvati 26.9 4E+02 0.0086 22.7 14.8 35 10-49 48-83 (376)
345 KOG3097 Predicted membrane pro 26.6 3.9E+02 0.0085 22.5 7.0 60 111-177 29-88 (390)
346 PRK10457 hypothetical protein; 26.1 1.8E+02 0.0038 18.4 5.5 14 53-66 63-76 (82)
347 PF11833 DUF3353: Protein of u 26.1 2.9E+02 0.0063 20.9 6.0 30 15-44 137-166 (194)
348 PF06645 SPC12: Microsomal sig 24.0 1.4E+02 0.0031 18.4 3.3 48 22-75 11-58 (76)
349 PF15192 TMEM213: TMEM213 fami 23.7 1.1E+02 0.0024 18.6 2.5 15 40-54 46-60 (82)
350 cd02434 Nodulin-21_like_3 Nodu 23.5 3.6E+02 0.0077 21.0 6.8 20 160-179 180-199 (225)
351 KOG3810 Micronutrient transpor 23.0 1.3E+02 0.0028 25.5 3.6 71 230-300 115-187 (433)
352 PF11947 DUF3464: Protein of u 22.8 3E+02 0.0065 19.9 5.7 74 103-177 52-126 (153)
353 PF02667 SCFA_trans: Short cha 22.7 4E+02 0.0086 23.4 6.6 18 101-118 241-258 (453)
354 PF04341 DUF485: Protein of un 21.9 2.3E+02 0.005 18.2 4.6 51 104-154 7-59 (91)
355 PF06783 UPF0239: Uncharacteri 21.1 1.9E+02 0.0041 18.4 3.3 17 49-65 23-39 (85)
356 PF04117 Mpv17_PMP22: Mpv17 / 20.3 59 0.0013 19.4 1.1 27 2-28 32-58 (68)
357 PF09911 DUF2140: Uncharacteri 20.1 50 0.0011 24.7 0.8 17 47-63 2-18 (187)
No 1
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.6e-36 Score=251.19 Aligned_cols=300 Identities=32% Similarity=0.660 Sum_probs=272.3
Q ss_pred CchhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhh-cCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 022127 1 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST-IGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPF 79 (302)
Q Consensus 1 ~p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~ 79 (302)
+|+...+.++|.|++||++..++..++..+|.+++.+++|++.+. +||+++|++.+.++++..++++.+..|+|++++.
T Consensus 146 ~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~ 225 (466)
T KOG2532|consen 146 FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPN 225 (466)
T ss_pred HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCC
Confidence 588899999999999999999999999999999999999999998 9999999999999999999999999999999999
Q ss_pred CChHHHHHHHhcCcccccC-CCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHH
Q 022127 80 VSKSELRLIQAGKSDSVKK-RNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWG 158 (302)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~ 158 (302)
.+++|++.++++..+++.+ +.+.+++++++++.+|...+..++.++..+.+..|.|.|+++++|+|..+.|++.++..+
T Consensus 226 is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l 305 (466)
T KOG2532|consen 226 ISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFL 305 (466)
T ss_pred CCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHH
Confidence 9999999999887765333 367899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhccc--chHHHHHHHHHHHHHhhhhhhhhhhHHhh
Q 022127 159 TMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK--SPAVAAVLITIALSLSSFSQAGYLLNIQE 236 (302)
Q Consensus 159 ~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (302)
...+..+++|.++||+.+|....+..||....++....++.++.+.+.+ +.+..+.++.+.....++..+..+....+
T Consensus 306 ~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~ 385 (466)
T KOG2532|consen 306 AMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQD 385 (466)
T ss_pred HHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhh
Confidence 9999999999999999888777777899999999999999998888876 34456677777777888888888888888
Q ss_pred hccchhhhHHHHHHHHHHHHHHHHHHHhhhhhcc--ccchhHHHHHHHHHHHHHHHHHHhhccCcc
Q 022127 237 IAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQW--LGSFQAFLTVTAGLYFVTTIFWNLYSTGER 300 (302)
Q Consensus 237 ~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (302)
..|++.+..+|+.+....+.++++|.+.|.+... ..+|+.+|.+.+++.+++.+++.++.+.|+
T Consensus 386 ~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~e~ 451 (466)
T KOG2532|consen 386 IAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFGSGEP 451 (466)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEeecCcc
Confidence 8999999999999999999999999999999842 236999999999999999988888765544
No 2
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-34 Score=228.80 Aligned_cols=290 Identities=19% Similarity=0.190 Sum_probs=224.9
Q ss_pred CchhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHH--HHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 022127 1 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLT--PIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSP 78 (302)
Q Consensus 1 ~p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~ 78 (302)
+|++...+.+|+|++|||+..++++++.++|..+.|++. +++..+.+||..|++.++++++..++.++..+|+|++..
T Consensus 135 wpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~G 214 (448)
T COG2271 135 WPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEG 214 (448)
T ss_pred CcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccC
Confidence 589999999999999999999999999999999999999 899889999999999999999999999999999999765
Q ss_pred CCChHHHHHHHhcCcccccCC-----CCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHh
Q 022127 79 FVSKSELRLIQAGKSDSVKKR-----NPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFS 153 (302)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~ 153 (302)
-.+.+|......+..+++++. ...-.+.+++||.+|.+++...+.+...+++..|.|.|+.|..|+|..+++...
T Consensus 215 LP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~ 294 (448)
T COG2271 215 LPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAI 294 (448)
T ss_pred CCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHH
Confidence 544333221111111111111 112355678999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccch--HHHHHHHHHHHHHhhhhhhhhh
Q 022127 154 AVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSP--AVAAVLITIALSLSSFSQAGYL 231 (302)
Q Consensus 154 ~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 231 (302)
+.+..+++.|++++|+++||+-+.+ |.....+.++...+++......++. ....+++...+++...-....-
T Consensus 295 ~lfE~agl~G~Ll~GwlSDklfkgr------R~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiG 368 (448)
T COG2271 295 SLFEVAGLPGTLLAGWLSDKLFKGR------RGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIG 368 (448)
T ss_pred HHHHHHhhHHHHHHHHHHHHhcccc------cchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHH
Confidence 9999999999999999999986432 2333345555555555555555433 4433333333333222223334
Q ss_pred hHHhhhcc-chhhhHHHHHHHHHHH-HHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhcc
Q 022127 232 LNIQEIAP-DCAGFLHGIANSAGTL-AAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYST 297 (302)
Q Consensus 232 ~~~~~~~p-~~~~~~~g~~~~~~~~-g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (302)
....|..| +..|++.|+...+.++ |.+.+....|++.|.+| |...|++..+.++++.++++...+
T Consensus 369 l~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~g-W~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 369 LAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWG-WDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred HHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCC-CcchHHHHHHHHHHHHHHHHHHHh
Confidence 45578888 6789999999999999 88999999999999987 999999988888888777655443
No 3
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=1.5e-31 Score=228.70 Aligned_cols=299 Identities=25% Similarity=0.455 Sum_probs=228.0
Q ss_pred CchhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhc-CCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 022127 1 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-GISGPFILFSSLGLLWLSTWTSKVTNDPCNSPF 79 (302)
Q Consensus 1 ~p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~ 79 (302)
+|+..+++.||+|+++|++++++...+..+|.++++++++.+.+.. |||+.|++.++++++..++++...+|+|+++++
T Consensus 149 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~ 228 (465)
T TIGR00894 149 SPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPC 228 (465)
T ss_pred hhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCC
Confidence 4677899999999999999999999999999999999999999884 999999999998888877777777888876665
Q ss_pred CChHHHHHHHhcCcccc-cCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHH
Q 022127 80 VSKSELRLIQAGKSDSV-KKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWG 158 (302)
Q Consensus 80 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~ 158 (302)
.+++|++..++..++++ +++.+.++++++++|.+|...+..++.+...+.+..|+|.|+++.+|.+..+.++..+...+
T Consensus 229 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~ 308 (465)
T TIGR00894 229 ISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYL 308 (465)
T ss_pred CCHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHH
Confidence 55555555444322221 22234568999999999999999999999999999999999999899999999999999999
Q ss_pred HHHhhhhhhhcccchhhccCCchhH-HHHHHHHHhhhhhHHHHHHhhc-ccchHHHHHHHHHHHHHhhhhhhhhhhHHhh
Q 022127 159 TMAVSGYMAGKASDSLIKAGYSLTL-VRKIMQSIGFIGPGVSLLCLNY-AKSPAVAAVLITIALSLSSFSQAGYLLNIQE 236 (302)
Q Consensus 159 ~~~~~~~~~g~l~dr~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (302)
+..++.++.|+++||+++|+..... .++....++.....+..+.... ..+....+..+.+..++.+...+.......+
T Consensus 309 ~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 388 (465)
T TIGR00894 309 FAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLD 388 (465)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhh
Confidence 9999999999999999876543221 2233333333222222222222 2333333444445444444444555566678
Q ss_pred hccchhhhHHHHHHHHHHHHHHHHHHHhhhhhccc--cchhHHHHHHHHHHHHHHHHHHhhccCc
Q 022127 237 IAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWL--GSFQAFLTVTAGLYFVTTIFWNLYSTGE 299 (302)
Q Consensus 237 ~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (302)
..|+.+|.+.|+.+..+++++.++|.+.|.+.|.. ++|...|.+.++..+++.++...+.+.+
T Consensus 389 ~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~ 453 (465)
T TIGR00894 389 LAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFGSAE 453 (465)
T ss_pred cChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeeecce
Confidence 88899999999999999999999999999988754 4588899999888888887766655444
No 4
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.97 E-value=3.3e-29 Score=210.08 Aligned_cols=291 Identities=24% Similarity=0.406 Sum_probs=214.2
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|+..+++.|++|+|+|++++++.+...++|..+++.+++.+.+..+||+.|++.+++.++..+...+..||+|++++..+
T Consensus 101 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (399)
T TIGR00893 101 PGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLT 180 (399)
T ss_pred hHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCccccCC
Confidence 56778999999999999999999999999999999999999999999999999888888777666666777665443333
Q ss_pred hHHHHHHHhcC-----cccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHH
Q 022127 82 KSELRLIQAGK-----SDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVP 156 (302)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~ 156 (302)
+++++...+.. +++++++.+...++.+++|+++...+..++..........+.|.|+++.+|.++.+.+...+..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (399)
T TIGR00893 181 EEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLP 260 (399)
T ss_pred HHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHH
Confidence 33322211110 1112223344677889999999999999998889999999999999988999999999999999
Q ss_pred HHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhh
Q 022127 157 WGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQE 236 (302)
Q Consensus 157 ~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (302)
.++..++.+..|++.||+++|+..... .......+..............++.+.......+..+..+ ..+.......|
T Consensus 261 ~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 338 (399)
T TIGR00893 261 GIVGFIGMILGGRLSDLLLRRGKSLVF-ARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISD 338 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccchhH-HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHh
Confidence 999999999999999999988522111 1111111111112222222222233333333333333333 56677788888
Q ss_pred hcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHh
Q 022127 237 IAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNL 294 (302)
Q Consensus 237 ~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 294 (302)
..| ++|+++.|+.+...++|+.++|.+.|.+.|..|+++..+.+.++..+++.+..+.
T Consensus 339 ~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 339 NAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred hcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 887 8899999999999999999999999999998877888998888887777665543
No 5
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.97 E-value=3.6e-29 Score=211.84 Aligned_cols=295 Identities=14% Similarity=0.108 Sum_probs=199.5
Q ss_pred CchhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCC
Q 022127 1 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFV 80 (302)
Q Consensus 1 ~p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (302)
+|...+++.|++|+++|++++++.+.+.++|..+++.+++.+.+.+|||+.|++.+++.++..+...+.+||+|++.+..
T Consensus 129 ~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~ 208 (434)
T PRK11663 129 WPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLP 208 (434)
T ss_pred chHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCC
Confidence 35677899999999999999999999999999999999999999999999999988877766655555677776533211
Q ss_pred ChHHHHHHHhcCccccc--CCCCcc-h-HHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHH
Q 022127 81 SKSELRLIQAGKSDSVK--KRNPPS-L-RHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVP 156 (302)
Q Consensus 81 ~~~~~~~~~~~~~~~~~--~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~ 156 (302)
+.++.+...++.+++++ +.+..+ . +..+++|.+|...+..++.......+..|+|.|+++.+|++..+++...+..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~ 288 (434)
T PRK11663 209 SVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMF 288 (434)
T ss_pred CcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHH
Confidence 11100000000000000 001111 1 2367789999888888877777788889999999877899999999999999
Q ss_pred HHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhh
Q 022127 157 WGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQE 236 (302)
Q Consensus 157 ~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (302)
.+++.+++++.|+++||+.+++... .......+............ ..+...........+++.............|
T Consensus 289 ~~~~~~g~~~~g~l~dr~~~~~r~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 364 (434)
T PRK11663 289 ELGGFIGALVAGWGSDKLFNGNRGP---MNLIFAAGILLSVGSLWLMP-FASYVMQAACFFTIGFFVFGPQMLIGMAAAE 364 (434)
T ss_pred HHHHHHHHHHHhhhHHHhccCCccH---HHHHHHHHHHHHHHHHHHcc-cccHHHHHHHHHHHHHHHhhHHHHHHHHHHh
Confidence 9999999999999999995432110 11111122222222222222 2222221111111111111111122344567
Q ss_pred hcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhccCcc
Q 022127 237 IAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGER 300 (302)
Q Consensus 237 ~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (302)
..| ++++++.|+.+...++|++++|.+.|++.|+.| |...|...+++.+++.+..+...|+++
T Consensus 365 ~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~~~~ 428 (434)
T PRK11663 365 CSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWH-WTGFFVVISIAAGISALLLLPFLNAQA 428 (434)
T ss_pred cccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 776 889999999999999999999999999999987 999999998888887776665555544
No 6
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=6.9e-29 Score=199.57 Aligned_cols=269 Identities=19% Similarity=0.237 Sum_probs=211.3
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
+...++..|..||++|++++++...+..++.++|.+++.++.+.+|||+.|++.+.++++..+..+..+| |++.++..
T Consensus 120 ~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~~ 197 (394)
T COG2814 120 SIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEISGSL 197 (394)
T ss_pred HHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCCC
Confidence 4567788999999999999999999999999999999999999999999999999999998888888888 22111111
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMA 161 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ 161 (302)
+. +..+..+.+|+|+++...+..++...+.+...+|+.+++++..|+|....++....++++..
T Consensus 198 ~~----------------~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~ 261 (394)
T COG2814 198 PG----------------PLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGF 261 (394)
T ss_pred Cc----------------chhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHH
Confidence 01 01124678999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc-ccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhccc
Q 022127 162 VSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY-AKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAPD 240 (302)
Q Consensus 162 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 240 (302)
+|+.++|++.|| +.| +.+. ....+..+.+..+.+ ..+.+.......+.++..............+..||
T Consensus 262 ~Gn~~gGrl~dr-~~~--------~~l~-~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~ 331 (394)
T COG2814 262 IGNLLGGRLADR-GPR--------RALI-AALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLARLAPD 331 (394)
T ss_pred HHHHHHhhhccc-cch--------hHHH-HHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCC
Confidence 999999999999 543 2222 232333333333333 34444444444444443333333444445556679
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhccCc
Q 022127 241 CAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGE 299 (302)
Q Consensus 241 ~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (302)
.+..+.+++....|+|..+|..++|.+.|+.| +....++.+...+++.++.+...+.+
T Consensus 332 ~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g-~~~~~~~~a~l~~~a~~~~~~~~~~~ 389 (394)
T COG2814 332 AADLAGSLNVAAFNLGIALGAALGGLVLDALG-YAATGWVGAALLLLALLLALLSARKD 389 (394)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999976 99999999999888888776655543
No 7
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.97 E-value=1.5e-29 Score=216.21 Aligned_cols=285 Identities=15% Similarity=0.088 Sum_probs=200.8
Q ss_pred CchhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhc---CCchHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 022127 1 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI---GISGPFILFSSLGLLWLSTWTSKVTNDPCNS 77 (302)
Q Consensus 1 ~p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~ 77 (302)
+|+..++++||+|++||++++|+...+.++|.++++.+..++.+.. +||..|.+.+++.++..++.+++.+|+|+++
T Consensus 140 ~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~ 219 (467)
T PRK09556 140 GPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEEL 219 (467)
T ss_pred chHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhc
Confidence 3677889999999999999999999999999999999988777653 6999999988888887777777778877654
Q ss_pred CCCChHHHHHHHhcCc-cc-ccCCCCcc-----hHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhh
Q 022127 78 PFVSKSELRLIQAGKS-DS-VKKRNPPS-----LRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAA 150 (302)
Q Consensus 78 ~~~~~~~~~~~~~~~~-~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~ 150 (302)
+..++++. ..+... ++ .+++++.+ .++.+|||.+|...+..++.+...+....|+|.|+++.+|+|..+++
T Consensus 220 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~ 297 (467)
T PRK09556 220 GWGKAEEI--FGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAI 297 (467)
T ss_pred CCCChhhc--ccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHH
Confidence 43332221 000000 00 00001111 22378999999999999988888888899999999988999999999
Q ss_pred HHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhh
Q 022127 151 WFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGY 230 (302)
Q Consensus 151 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (302)
...+...++..++.+..|+++||+++|+... ..................++.........+.+..........
T Consensus 298 ~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 370 (467)
T PRK09556 298 NTFTLFEIGALVGSLLWGWLSDLANGRRALV-------ACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLI 370 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCchHH-------HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHH
Confidence 9999999999999999999999999874321 111111111111222222333332222222222211111222
Q ss_pred hhHHhhhcc-chhhhHHHHHHHHHHH-HHHHHHHHhhhhhc------------cccchhHHHHHHHHHHHHHHHHHHhh
Q 022127 231 LLNIQEIAP-DCAGFLHGIANSAGTL-AAIISTIGTGYFVQ------------WLGSFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 231 ~~~~~~~~p-~~~~~~~g~~~~~~~~-g~~i~~~i~g~l~~------------~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
.....|..| +.+|++.|+.+...++ |++++|.+.|.+.| ..| |+..|.+..++.+++.+..+.+
T Consensus 371 ~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 371 GVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTG-WAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred HHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccC-hHHHHHHHHHHHHHHHHHHHHH
Confidence 345568778 7899999999999997 77999999999999 455 9999999888888877766554
No 8
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.97 E-value=1.8e-28 Score=202.18 Aligned_cols=264 Identities=13% Similarity=0.041 Sum_probs=194.3
Q ss_pred hhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCh
Q 022127 3 AMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSK 82 (302)
Q Consensus 3 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 82 (302)
+..+.++|++|+|||++++++.+.+..+|..+++++++++.+++|||+.|++.++++++..+++++.+||+|+++++..+
T Consensus 98 ~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~~~ 177 (368)
T TIGR00903 98 NAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQAAEGFG 177 (368)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcc
Confidence 34566799999999999999999999999999999999999999999999999999888887788888988764321110
Q ss_pred HHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHh
Q 022127 83 SELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAV 162 (302)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~ 162 (302)
.+ + ...++++++|||.+|...+..++.....+.+.+|+|.|+++ .|++.. .+.......+.+.+
T Consensus 178 ~~-~-------------~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~ 241 (368)
T TIGR00903 178 FK-D-------------AVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLI 241 (368)
T ss_pred hH-H-------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHH
Confidence 00 0 01147789999999999999999999999999999999987 678864 56555555555554
Q ss_pred hhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-ch
Q 022127 163 SGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DC 241 (302)
Q Consensus 163 ~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~ 241 (302)
+ .++++||..||+. |+..........++.........+.........+.+++.....+..+.+.+|..| +.
T Consensus 242 g---~~~~~d~~~r~~~-----r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~ 313 (368)
T TIGR00903 242 G---VAVIPDRVARAGL-----RSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL 313 (368)
T ss_pred H---HHHhhHHhhhhhh-----HHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh
Confidence 4 5788998876532 1221111222223333333333334333444444555555555667788899998 78
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHH
Q 022127 242 AGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWN 293 (302)
Q Consensus 242 ~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 293 (302)
|+++.|+.+..+++++..+|.+.+.+.. + ....|.+.++..+++.+...
T Consensus 314 rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~-~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 314 HGKAAGAIGFTSRAISVALALAAMLFIS--S-AEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred cCcccchhhHHHHHHHHHHHHHHHHHhc--C-HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998874 3 67778888887777776654
No 9
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.97 E-value=1.3e-28 Score=206.87 Aligned_cols=275 Identities=15% Similarity=0.149 Sum_probs=192.1
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHh------hcCCchHHHHHHHHHHHHHHHHHhhhcCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS------TIGISGPFILFSSLGLLWLSTWTSKVTNDPC 75 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~ 75 (302)
|+..+++.||+|+++|++++++++.+.++|..+++.+++++.+ ..|||+.|++.++++++..++.++++||+|+
T Consensus 115 ~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 115 PGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 5667889999999999999999999999999999999998874 3699999999988888877777777899887
Q ss_pred CCCCCChHHHHHHHhcCc------c-ccc--CCC----CcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHh-
Q 022127 76 NSPFVSKSELRLIQAGKS------D-SVK--KRN----PPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTV- 141 (302)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~------~-~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 141 (302)
+.+..++++++..++..+ + .++ ++. +..+++++ +|.+|...+..++.....+.+.+|+|.|+++.
T Consensus 195 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~ 273 (412)
T TIGR02332 195 KAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFN 273 (412)
T ss_pred cCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 655444433332211100 0 000 011 11234444 58888888888888888889999999999882
Q ss_pred hccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHH
Q 022127 142 FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALS 221 (302)
Q Consensus 142 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (302)
.|.+..+++.......++..++.+..|+++||+++|+. .. ........+.+......++.........+...
T Consensus 274 ~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (412)
T TIGR02332 274 QGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKH-------HT-ALPYLFAAAGWLLASATDHNLIQLLGIIMASM 345 (412)
T ss_pred CCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHH-------HH-HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 46788888999999999999999999999999987632 11 11222222222222222222222222222222
Q ss_pred HhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHH
Q 022127 222 LSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLY 285 (302)
Q Consensus 222 ~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~ 285 (302)
+.....+.......|..| ++|+++.|+.+...++|++++|.+.|.+.|..|+|+..+.+.++..
T Consensus 346 g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 346 GSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred HhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 121222223344455566 8899999999999999999999999999999888998888776654
No 10
>PRK03545 putative arabinose transporter; Provisional
Probab=99.97 E-value=7.7e-28 Score=201.36 Aligned_cols=266 Identities=16% Similarity=0.124 Sum_probs=200.5
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|...+++.|++|+|||++++|+...+.++|..++|++++.+.++.|||+.|++.++++++..+..+...||+|++++
T Consensus 116 ~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~--- 192 (390)
T PRK03545 116 SITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSEHS--- 192 (390)
T ss_pred HHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc---
Confidence 56678899999999999999999999999999999999999999999999999998887766665555665443211
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMA 161 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ 161 (302)
++ ..+.++.+|+|.++......++.....+....+.|.|+++..|.|+.+.+...+...+++.
T Consensus 193 -~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~ 255 (390)
T PRK03545 193 -GS----------------LKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGI 255 (390)
T ss_pred -ch----------------HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHH
Confidence 00 1135678899988877666666666666667788888888789999999999999999999
Q ss_pred hhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHH-HhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhccc
Q 022127 162 VSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLL-CLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAPD 240 (302)
Q Consensus 162 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 240 (302)
++++..|++.||.++|. .. .+..+...... .....++.+.......+.+.......+.......+..|+
T Consensus 256 ~g~~~~g~l~dr~~~~~--------~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 325 (390)
T PRK03545 256 IGSVLFSRLGNRHPSGF--------LL--IAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD 325 (390)
T ss_pred HHHHHHHHHhhccchhH--------HH--HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC
Confidence 99999999999997542 11 22222222222 222334444433444444444444344556666777888
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhccC
Q 022127 241 CAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTG 298 (302)
Q Consensus 241 ~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (302)
++++++|+.+...++|..+||.+.|.+.|+.| ++..+...+.+.+++.+......++
T Consensus 326 ~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
T PRK03545 326 ATDVAMALFSGIFNIGIGAGALLGNQVSLHLG-LSSIGYVGAALALAALVWSILIFRR 382 (390)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhHHHHHHHHHHHHHHHHHHHHccc
Confidence 89999999999999999999999999999987 9999999998888888776665543
No 11
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.96 E-value=3.9e-28 Score=193.23 Aligned_cols=270 Identities=17% Similarity=0.217 Sum_probs=223.2
Q ss_pred CchhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcC---CchHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 022127 1 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG---ISGPFILFSSLGLLWLSTWTSKVTNDPCNS 77 (302)
Q Consensus 1 ~p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g---wr~~f~~~~~~~~~~~~~~~~~~~~~p~~~ 77 (302)
|...+..+++|+|||++|.++|+.. ..|+|..+...++..+....| ||....+..+..++..+..++...|.|+.+
T Consensus 122 Fav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r 200 (417)
T COG2223 122 FAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHR 200 (417)
T ss_pred ehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhh
Confidence 3467788999999999999999999 999999999999999999999 999999988888888888888888888743
Q ss_pred CCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHH
Q 022127 78 PFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPW 157 (302)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~ 157 (302)
+..++.+. ...+.+++||+.|.+.+.++....++.++..++|.|+++++|.++.+++.......
T Consensus 201 ~~~~~~~~----------------~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~ 264 (417)
T COG2223 201 ASVKPQLP----------------AQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFP 264 (417)
T ss_pred ccccccch----------------hHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHH
Confidence 32222110 24678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcc-------cchHHHHHHHHHHHHHhhhhhhhh
Q 022127 158 GTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA-------KSPAVAAVLITIALSLSSFSQAGY 230 (302)
Q Consensus 158 ~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 230 (302)
+.+.+.++.+|+++||+|.+|.. . .....+.++....... .+.......+.....+.+......
T Consensus 265 ~~g~l~Rp~GG~LsDR~Gg~rv~-------~--~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsv 335 (417)
T COG2223 265 LIGALARPLGGWLSDRIGGRRVT-------L--AVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSV 335 (417)
T ss_pred HHHHHHHhccchhhhhccchhHH-------H--HHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchh
Confidence 99999999999999999987432 1 2222223332222222 334445555556667788888888
Q ss_pred hhHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhc
Q 022127 231 LLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 231 ~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
+..+...+|++.|.+.|+...++.+|+..-|...|...|.+|++...|++...+.+++.+......
T Consensus 336 fk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 336 FKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred eeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999888887655443
No 12
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.96 E-value=4.6e-27 Score=200.10 Aligned_cols=291 Identities=17% Similarity=0.208 Sum_probs=191.2
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHH-HHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNV-VGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFV 80 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (302)
|...+.+.|++|+++|++++++.+.+.++|.. .++..+..+....|||+.|++.+++.++..++..+++||+|++....
T Consensus 139 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (452)
T PRK11273 139 PPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLP 218 (452)
T ss_pred hHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCC
Confidence 55667889999999999999999999999874 45554444444559999999988888877777777778877653222
Q ss_pred ChHHHHH-HHhcCcccccCC--CCcc-hHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHH
Q 022127 81 SKSELRL-IQAGKSDSVKKR--NPPS-LRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVP 156 (302)
Q Consensus 81 ~~~~~~~-~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~ 156 (302)
++++.+. ..++.+++++++ .+.. .+.++|+|.+|...+..++.+...+....++|.|++++.|++..+.+......
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~ 298 (452)
T PRK11273 219 PIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLY 298 (452)
T ss_pred ChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 2211110 000000000000 0111 13467899999988888888888888889999999998899999999888888
Q ss_pred HHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHH--hhcccchHHHHHHHHHHHHHhhhhhhhhhhHH
Q 022127 157 WGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLC--LNYAKSPAVAAVLITIALSLSSFSQAGYLLNI 234 (302)
Q Consensus 157 ~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (302)
.++..++.++.|+++||+++++.. ... .....+..+.... .....+...........+..............
T Consensus 299 ~~~~~~g~~~~G~l~dr~~~~r~~-----~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 372 (452)
T PRK11273 299 EYAGIPGTLLCGWMSDKVFRGNRG-----ATG-VFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHA 372 (452)
T ss_pred HHHHHHHHHHHHHHHHHHccCCcc-----hHH-HHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 899999999999999999543211 011 1111111122211 11122332222222222221111112223345
Q ss_pred hhhcc-chhhhHHHHHHHHHHHHHHH-HHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhccCc
Q 022127 235 QEIAP-DCAGFLHGIANSAGTLAAII-STIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGE 299 (302)
Q Consensus 235 ~~~~p-~~~~~~~g~~~~~~~~g~~i-~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (302)
.|..| +.+|+++|+.+...++|+.+ +|.+.|.+.|+.| |+..|.++++.++++.+....+.+.|
T Consensus 373 ~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~~~ 438 (452)
T PRK11273 373 LELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVILLIVVMIGE 438 (452)
T ss_pred HHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHhccc
Confidence 67777 78999999999999998765 7999999999987 99999988888888777666554433
No 13
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.96 E-value=1.5e-27 Score=202.28 Aligned_cols=293 Identities=16% Similarity=0.210 Sum_probs=197.3
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHh-hcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS-TIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFV 80 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (302)
|.....+.|++|+++|++++++.+.+.++|..+++.+.+...+ +.+||+.|++.+++.++..+..++.+||+|++++..
T Consensus 137 ~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 216 (438)
T TIGR00712 137 PPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLP 216 (438)
T ss_pred HHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCC
Confidence 4566788999999999999999999999999999888776444 579999999999888887767677778776543211
Q ss_pred ChHHH-H-HHHhcCcccccCC-CCcc-hHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHH
Q 022127 81 SKSEL-R-LIQAGKSDSVKKR-NPPS-LRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVP 156 (302)
Q Consensus 81 ~~~~~-~-~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~ 156 (302)
+.++. + ..++..++++++. .+.. .+.++|++.+|...+..++.+...+....+.|.|+++..|+|+.+++......
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~ 296 (438)
T TIGR00712 217 PIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLY 296 (438)
T ss_pred CchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHH
Confidence 11110 0 0000000000000 0111 22478899999988888887888888889999999998899999999999999
Q ss_pred HHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc--ccchHHHHHHHHHHHHHhhhhhhhhhhHH
Q 022127 157 WGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY--AKSPAVAAVLITIALSLSSFSQAGYLLNI 234 (302)
Q Consensus 157 ~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (302)
.+.++++++..|+++||+++++... ..........+....... ..+.+.........+..............
T Consensus 297 ~~~~~ig~~~~g~l~dr~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 370 (438)
T TIGR00712 297 EYAGIPGTLLCGWMSDKVFKGNRGA------TGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHA 370 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccCcccH------HHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 9999999999999999997553221 101111111111111111 12222222211111111111111112345
Q ss_pred hhhcc-chhhhHHHHHHHHHHHHH-HHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhccCccc
Q 022127 235 QEIAP-DCAGFLHGIANSAGTLAA-IISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGERV 301 (302)
Q Consensus 235 ~~~~p-~~~~~~~g~~~~~~~~g~-~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (302)
.|..| ++|+++.|+.+...++++ +++|.+.|.+.|+.| |...+.+..+..+++.+..+++.++||+
T Consensus 371 ~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (438)
T TIGR00712 371 LELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVILLIVVMIGEKR 438 (438)
T ss_pred HHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc-chHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 67777 789999999999988875 689999999999887 9999999888888888888888887764
No 14
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.95 E-value=1.3e-26 Score=198.02 Aligned_cols=281 Identities=16% Similarity=0.077 Sum_probs=195.0
Q ss_pred hhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHh---------hcCCchHHHHHHHHHHHHHHHHHhhhcCCC
Q 022127 4 MSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS---------TIGISGPFILFSSLGLLWLSTWTSKVTNDP 74 (302)
Q Consensus 4 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p 74 (302)
...+++|++|+++|++++++.+...++|..+++.+.+.+.. ..|||+.|++.+++.++..++.+++.+|.|
T Consensus 144 ~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p 223 (476)
T PLN00028 144 CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLP 223 (476)
T ss_pred HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCC
Confidence 45578999999999999999988888888877766655432 258999999999988887766666544444
Q ss_pred CCCCCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhh
Q 022127 75 CNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSA 154 (302)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 154 (302)
+++ .++. +++.+. +++.....+++.++++++|...+..+......+....+.|.|+.+.+|+++.+++.+.+
T Consensus 224 ~~~----~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~ 295 (476)
T PLN00028 224 DGN----YREL---KKSGTM-PKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAA 295 (476)
T ss_pred CCc----hhhH---HhcCcc-ccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHH
Confidence 321 0110 000000 00111123566788999988888777766666777889999998888999999999999
Q ss_pred HHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHH
Q 022127 155 VPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNI 234 (302)
Q Consensus 155 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (302)
...+++.+++++.|+++||+++|+... .|+........+.++....+...++.........+...+.+...+..+...
T Consensus 296 ~~~~~~~ig~~~~G~lsDr~~~r~~~~--~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 373 (476)
T PLN00028 296 SFGLMNLFARPAGGYLSDVAARRFGMR--GRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIV 373 (476)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhcCcc--hhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccC
Confidence 999999999999999999999875322 134443344444444444444444443333333444444444455566666
Q ss_pred hhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhc
Q 022127 235 QEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 235 ~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
.+..|+++|+..|+.+...++|+.++|.+.+ .+..++|+..|.+.+++.+++.++.++.+
T Consensus 374 ~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~--~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 374 PFVSRRSLGVISGLTGAGGNVGAVLTQLLFF--TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred cccChhhchhhhhhhhccccHHHHHHHHHHH--hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 7778899999999998888888888887765 22334699999999988888887776664
No 15
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.95 E-value=3.6e-26 Score=190.51 Aligned_cols=266 Identities=15% Similarity=0.072 Sum_probs=194.1
Q ss_pred chhhhhhhcccCccchhhH--HHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASA--IGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPF 79 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~ 79 (302)
|...++..|+.|+++|++. .+....+.++|..+++.+++.+.+.+|||+.|++.+++.++..+..++.+||+|+++++
T Consensus 106 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (375)
T TIGR00899 106 PQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPG 185 (375)
T ss_pred HHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCccc
Confidence 5566778888887777754 68888889999999999999999999999999999888777766666667776543221
Q ss_pred CChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHH
Q 022127 80 VSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGT 159 (302)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~ 159 (302)
.+ .+.+.++.+++|+++......++..........+.|.|+++++|.++.+.+.........
T Consensus 186 ~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~ 247 (375)
T TIGR00899 186 AL------------------TRLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGL 247 (375)
T ss_pred cc------------------CcchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 00 011234467778777666666555555555667889999888999999999888777777
Q ss_pred HHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc
Q 022127 160 MAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP 239 (302)
Q Consensus 160 ~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 239 (302)
..++.+..|++.||+++|+.. ..+.....+........++.+.......+.+.+.+...+......+|..|
T Consensus 248 ~~~~~~~~g~l~~r~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~ 318 (375)
T TIGR00899 248 EIPFMLLAGYLIKRFGKRRLM---------LLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMP 318 (375)
T ss_pred HHHHHHhHHHHHHHhcchhHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 888889999999999976321 12233333333333333444444444444445555556666777788889
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhh
Q 022127 240 DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 240 ~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
++++++.|+.+...++|..++|.+.|.+.|..| ++..+.+.+++.+++.++....
T Consensus 319 ~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 319 GRAGAATTLYTNTGRVGWIIAGSVGGILAERWS-YHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHhee
Confidence 888899999999999999999999999999876 8999998888888777665443
No 16
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.95 E-value=1.8e-25 Score=191.99 Aligned_cols=280 Identities=14% Similarity=0.118 Sum_probs=178.9
Q ss_pred CchhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHH--------hhcCCchHHHHHHHHHHHHHHHHHhhhcC
Q 022127 1 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML--------STIGISGPFILFSSLGLLWLSTWTSKVTN 72 (302)
Q Consensus 1 ~p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 72 (302)
+|+..++++|++|+++|+++.++...+..+|..+++.+...+. +.+|||+.|++.++++++ .++....+||
T Consensus 136 ~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~e 214 (490)
T PRK10642 136 YTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEE 214 (490)
T ss_pred HHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCC
Confidence 3677889999999999999999999999999988887765543 257999999997665554 3334455677
Q ss_pred CCCCCCCCChHHHHHHHhcCcccccCCCCcchHHhhcC-ccHHH-HHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhh
Q 022127 73 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSK-LPSWT-VIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAA 150 (302)
Q Consensus 73 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~ 150 (302)
+|+..+. ++..++...++.+++++.++++++++ ++.+. .....++....++....|+|.|+++.+|++..+.+
T Consensus 215 sp~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~ 289 (490)
T PRK10642 215 TPAFQQH-----VDKLEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGV 289 (490)
T ss_pred ChhHHHH-----HHhhhhhccccccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 6642110 00000000000011123356667653 33322 22333445667788889999999887899988888
Q ss_pred HHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhh-hH--HHHHHhhcccchHHHHHHHHHHHHHhhhhh
Q 022127 151 WFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIG-PG--VSLLCLNYAKSPAVAAVLITIALSLSSFSQ 227 (302)
Q Consensus 151 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (302)
.......++..++.++.|+++||+|||+. + ..+.+. .. .........++.........+.++..+...
T Consensus 290 ~~~~~~~~~~~~~~~~~g~l~dr~grr~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 360 (490)
T PRK10642 290 LIIIAIMIGMLFVQPVMGLLSDRFGRRPF--------V-ILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFT 360 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHH--------H-HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 77778888899999999999999998632 1 122211 11 111111122233333333333333334444
Q ss_pred hhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhh
Q 022127 228 AGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 228 ~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
+.......+.+| +.|+++.|..+....+++.++|.+.+++.+..+++...+....+..+++.+..++.
T Consensus 361 g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 429 (490)
T PRK10642 361 GVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTM 429 (490)
T ss_pred HHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 555666678888 88999999877777788899999999998876656666655555555555554444
No 17
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.95 E-value=6.7e-26 Score=190.82 Aligned_cols=270 Identities=17% Similarity=0.126 Sum_probs=190.5
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+||+.|++.+++.++..+.....+||+|+..+..+
T Consensus 122 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 201 (406)
T PRK11551 122 PNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAG 201 (406)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccC
Confidence 55678899999999999999999999999999999999988888999999999887766666556666777654321110
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcC---ccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSK---LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWG 158 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~ 158 (302)
+++. .+...++.+++ ++.+......+......+....|.|.|+++ .|.++.+.+...+...+
T Consensus 202 ~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~ 266 (406)
T PRK11551 202 AGKQ--------------RAPVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNI 266 (406)
T ss_pred cchh--------------hhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHH
Confidence 0000 00011222222 233444444555555666777889999988 79999999999999999
Q ss_pred HHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhc
Q 022127 159 TMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIA 238 (302)
Q Consensus 159 ~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (302)
+..++.++.|++.||+++|+. + ..+.....++.......++.+.......+.++......+.......|..
T Consensus 267 ~~~~~~~~~g~l~dr~g~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 337 (406)
T PRK11551 267 GGALGSLLIGALMDRLRPRRV--------V-LLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFY 337 (406)
T ss_pred HHHHHHHHHHHHHHHHhHHHH--------H-HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHc
Confidence 999999999999999987532 1 1233333333333344444443333333333334444566677778887
Q ss_pred c-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhh
Q 022127 239 P-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 239 p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
| ++|+++.|+.+...+++..++|.+.|.+.|+.+++...+.....+.+++.+..+..
T Consensus 338 p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 338 PTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred chhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 7 88999999999999999999999999999987767777777776666666555544
No 18
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.95 E-value=1.9e-25 Score=187.46 Aligned_cols=274 Identities=14% Similarity=0.088 Sum_probs=187.8
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHH-HHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGN-VVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFV 80 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (302)
|...+.+.|++|+|+|++++|+.+++.++|. .+++.+++.+.+.+||+..++......++..++..+..+|.+++++..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (402)
T TIGR00897 124 YSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFTPQHMQ 203 (402)
T ss_pred hHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCCccccc
Confidence 3455677899999999999999999999997 689999999988889776666544433333334444444433211110
Q ss_pred ChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHH
Q 022127 81 SKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTM 160 (302)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~ 160 (302)
++++ .++....+++++|+|+++...+..++.....+....+.|.|+++ +|+++.+.+.......+++
T Consensus 204 ~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~ 270 (402)
T TIGR00897 204 TREK------------FSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTN 270 (402)
T ss_pred CCcc------------hhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHH
Confidence 0000 00111246678999999988888888888888889999999977 8999999998888889999
Q ss_pred HhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhh--cccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhc
Q 022127 161 AVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLN--YAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIA 238 (302)
Q Consensus 161 ~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (302)
.++++..|+++||+++|+... ........+....+.... ..++.+.......+.+.+.+.. .+......+..
T Consensus 271 ~ig~~~~g~l~dr~~~~~~~~-----~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~~~~~~~~~ 344 (402)
T TIGR00897 271 IVFNVIFGIVGDKLGWMNTVR-----WFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGY-VPLAAVFPTLA 344 (402)
T ss_pred HHHHHHHHHHHHhhcchhHHH-----HHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHH-HHHHHHHHhhC
Confidence 999999999999999764210 010111111111111111 1223333333333333333332 23345567777
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhh
Q 022127 239 PDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 239 p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
|++|+++.|+.+...++++.++|.+.|.+.|..| +...+++.+++.+++.++..+.
T Consensus 345 ~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g-~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 345 PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFG-AIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hHHHHHHHHHHHHHHHHHHHHh
Confidence 8899999999999999999999999999999987 8888888888887777665544
No 19
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.95 E-value=1.2e-25 Score=190.47 Aligned_cols=272 Identities=15% Similarity=0.145 Sum_probs=181.1
Q ss_pred CchhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHH--------hhcCCchHHHHHHHHHHHHHHHHHhhhcC
Q 022127 1 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML--------STIGISGPFILFSSLGLLWLSTWTSKVTN 72 (302)
Q Consensus 1 ~p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 72 (302)
+|...++++|++|+++|+++.++...+...|..+++.+...+. +.+|||+.|++.++++++.. ......||
T Consensus 142 ~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~-~~~~~~~e 220 (432)
T PRK10406 142 YGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVAL-WLRRQLDE 220 (432)
T ss_pred HhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH-HHHhcCCC
Confidence 4778899999999999999999999999999888887765554 25799999998777666543 22333444
Q ss_pred CCCCCCCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHh-hhHHHHHHHhhhhHHHHHhhccchhhhhH
Q 022127 73 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANIT-NNWGYFVLLSWMPIYFNTVFNVNLKQAAW 151 (302)
Q Consensus 73 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~s~~~~~~ 151 (302)
+|+. |++.. ++..++++++|+|+.+...+...+ .....+....|+|.|+++.+|.+..+.+.
T Consensus 221 ~~~~-------~~~~~----------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~ 283 (432)
T PRK10406 221 TSQQ-------ETRAL----------KEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASG 283 (432)
T ss_pred CchH-------HHhhh----------cccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 3321 11000 012257888999988876665554 36677888899999998888999988888
Q ss_pred HhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHH--HHH-hhcccchHHHHHHHHHHHHHhhhhhh
Q 022127 152 FSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVS--LLC-LNYAKSPAVAAVLITIALSLSSFSQA 228 (302)
Q Consensus 152 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (302)
......+...++.++.|+++||++||+. ....+.+..... ... ....++.........+..+..+...+
T Consensus 284 ~~~i~~~~~~i~~~~~G~l~Dr~grr~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (432)
T PRK10406 284 IMTAALFVFMLIQPLIGALSDKIGRRTS--------MLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTS 355 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCchHH--------HHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888889999999999998732 111111111111 111 11122333222222323333333344
Q ss_pred hhhhHHhhhcc-chhhhHHHHHHHHHHH-HHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhccCc
Q 022127 229 GYLLNIQEIAP-DCAGFLHGIANSAGTL-AAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGE 299 (302)
Q Consensus 229 ~~~~~~~~~~p-~~~~~~~g~~~~~~~~-g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (302)
......+|.+| +.|+++.|+.+...++ .+...|.+.+.+ +..|++...++..++..+++.+..+++.++.
T Consensus 356 ~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~l~~~~ 427 (432)
T PRK10406 356 ISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLMLHRKG 427 (432)
T ss_pred HHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 55677789998 8899999999988775 345578877754 5566677777777777777666655554443
No 20
>PRK09952 shikimate transporter; Provisional
Probab=99.95 E-value=3.1e-25 Score=187.93 Aligned_cols=277 Identities=11% Similarity=0.060 Sum_probs=182.0
Q ss_pred CchhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHh--------hcCCchHHHHHHHHHHHHHHHHHhhhcC
Q 022127 1 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS--------TIGISGPFILFSSLGLLWLSTWTSKVTN 72 (302)
Q Consensus 1 ~p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--------~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 72 (302)
+|+..+++.|++|+|+|++..+..+.+..+|..++..+...+.+ .+|||+.|++.+++.++. .......||
T Consensus 143 ~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~e 221 (438)
T PRK09952 143 WGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEE 221 (438)
T ss_pred HHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCC
Confidence 36677899999999999999999999999999999887776653 579999999877655442 222223344
Q ss_pred CCCCCCCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHH-HHHhhhHHHHHHHhhhhHHHHHhhccchhhhhH
Q 022127 73 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVII-ANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAW 151 (302)
Q Consensus 73 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~ 151 (302)
+|+.. ++++ +. +++ +++....+.++++|+.+.... ..++.....+....|.|.|+++.+|.+......
T Consensus 222 s~~~~-----~~~~---~~-~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~ 290 (438)
T PRK09952 222 SAEFE-----QQQH---EQ-AAA--KKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLN 290 (438)
T ss_pred ChhHH-----HHHh---hc-ccc--cccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 43210 0000 00 000 001112334667777766544 455556677778899999998888988876655
Q ss_pred HhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHH--h-hccc-chHHHHHHHHHHHHHhhhhh
Q 022127 152 FSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLC--L-NYAK-SPAVAAVLITIALSLSSFSQ 227 (302)
Q Consensus 152 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~-~~~~~~~~~~~~~~~~~~~~ 227 (302)
.....+....++.++.|+++||++||+.. . .+.++..+.... . .... +.........+..+..+...
T Consensus 291 ~~~~~g~~~~i~~~~~g~l~Dr~grr~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 361 (438)
T PRK09952 291 IGLLVGGLSCLTIPCFAWLADRFGRRRVY-------I--TGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVV 361 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCchHHH-------H--HHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHH
Confidence 55566777888889999999999987422 1 222222221111 1 1122 22222333344444555556
Q ss_pred hhhhhHHhhhcc-chhhhHHHHHHHHHH-HHHHHHHHHhhhhhccc-cchhHHHHHHHHHHHHHHHHHHhhccC
Q 022127 228 AGYLLNIQEIAP-DCAGFLHGIANSAGT-LAAIISTIGTGYFVQWL-GSFQAFLTVTAGLYFVTTIFWNLYSTG 298 (302)
Q Consensus 228 ~~~~~~~~~~~p-~~~~~~~g~~~~~~~-~g~~i~~~i~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (302)
+..++...|..| +.|+++.|+.+.... +++.++|.+.+++.|.. ++|...+...+++.+++.+..+..+++
T Consensus 362 ~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 362 CVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred HHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHcccc
Confidence 667788899888 889999999766654 89999999999998854 458888888888888877776655443
No 21
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.95 E-value=7e-25 Score=183.29 Aligned_cols=259 Identities=15% Similarity=0.136 Sum_probs=184.8
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|...+++.|++|+|+|++++++...+.++|..++|++++.+.+.+|||+.|++.++++++..+......||+|++++
T Consensus 127 ~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~--- 203 (394)
T PRK10213 127 AMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPS--- 203 (394)
T ss_pred HHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCcccc---
Confidence 56778899999999999999999999999999999999999999999999999887776655444444555432110
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMA 161 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ 161 (302)
+ ...+.++.+|+|.++...+..++.....+....+.+.++.+++|+++.+.+......+++..
T Consensus 204 ~-----------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~i 266 (394)
T PRK10213 204 H-----------------QKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASF 266 (394)
T ss_pred c-----------------chhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHH
Confidence 0 01134578899999887776666666666666676444444589999999999999999999
Q ss_pred hhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhccch
Q 022127 162 VSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAPDC 241 (302)
Q Consensus 162 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 241 (302)
++.++.+++.||.++ +.+.....+.....+.+....++.+.......+.+.+.+...+...+..++..|++
T Consensus 267 ig~~~~~~l~~r~~~---------~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 337 (394)
T PRK10213 267 VGTSLSSFILKRSVK---------LALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQ 337 (394)
T ss_pred HHHHHHHHHHhccch---------hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCccc
Confidence 999999999998532 21112222222222333233344444444445555555666666666777777877
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHH
Q 022127 242 AGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTI 290 (302)
Q Consensus 242 ~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 290 (302)
+++..+......++|..+||.+.|.+.|..| +...+...+.+.++..+
T Consensus 338 ~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g-~~~~~~~~~~~~~~~~~ 385 (394)
T PRK10213 338 AEKAGSIQVAVIQLANTCGAAIGGYALDNIG-LTSPLMLSGTLMLLTAL 385 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhhHHHHHHHHHHHHHH
Confidence 7788888888889999999999999999886 77777776655544443
No 22
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.95 E-value=6.9e-25 Score=182.97 Aligned_cols=267 Identities=15% Similarity=0.129 Sum_probs=181.3
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|...+++.|++|+++|++++++...+..+|..+++++++.+.+..|||+.|++.+++.++..+..++.+||.+++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~--- 186 (382)
T PRK10091 110 GVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEAK--- 186 (382)
T ss_pred HHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCcccc---
Confidence 34466789999999999999999999999999999999999999999999999988877766655565666542211
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMA 161 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ 161 (302)
.+.+ +..+.+|+++.|......++.....+....+.+.++++.+|.++.+.+...+...++..
T Consensus 187 ~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ 249 (382)
T PRK10091 187 GGLR-----------------EQFHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMV 249 (382)
T ss_pred cCHH-----------------HHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 0000 11245677777776666555555555666777888887789999999999999999999
Q ss_pred hhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc-ccchHHHHHHHHHHHHHhhhhhhhhh-hHHhhhcc
Q 022127 162 VSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY-AKSPAVAAVLITIALSLSSFSQAGYL-LNIQEIAP 239 (302)
Q Consensus 162 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p 239 (302)
+++++.|++.||+++|+.. ..+..+..++.+.... .++.+.......+...+.....++.. ....+..|
T Consensus 250 ig~~~~g~l~~r~~~~~~~---------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 320 (382)
T PRK10091 250 LGNLLSGRLSGRYSPLRIA---------AVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKG 320 (382)
T ss_pred HHhHHHheeccccCchhHH---------HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCc
Confidence 9999999999999876432 1333333333332222 23333222322222222222222222 23334333
Q ss_pred -chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhccCc
Q 022127 240 -DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGE 299 (302)
Q Consensus 240 -~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (302)
+.++.+ ..+...++|.++||.+.|.+.|..++|+..+.+.++...+.......+.++|
T Consensus 321 ~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (382)
T PRK10091 321 GELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYK 379 (382)
T ss_pred chHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHhhhh
Confidence 445544 3467788999999999999999866799999988777776665554444433
No 23
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.95 E-value=5.5e-25 Score=184.21 Aligned_cols=264 Identities=13% Similarity=0.050 Sum_probs=183.8
Q ss_pred chhhhhhhcccCccch--hhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHER--ASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPF 79 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~ 79 (302)
|...+++.|+.++++| +...++.+.+.++|.+++|++++.+.+++|||..|+..++..++..+..+..+||++++++.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (393)
T PRK15011 124 PQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPL 203 (393)
T ss_pred HHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCcc
Confidence 4566777888776655 34568889999999999999999999999999999999888887777766667776543221
Q ss_pred CChHHHHHHHhcCcccccCCCCcchHHhhcC-ccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHH
Q 022127 80 VSKSELRLIQAGKSDSVKKRNPPSLRHLLSK-LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWG 158 (302)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~ 158 (302)
.+ ++ . + .. .++ +..+......+...........+.|.|+++.+|.++.+.+.+.+...+
T Consensus 204 ~~-~~-------~-~--------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~ 263 (393)
T PRK15011 204 AT-GT-------L-E--------AP---RRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAG 263 (393)
T ss_pred cc-cc-------c-c--------cc---ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 10 00 0 0 00 112 223333333344444555566789999988899999999988887778
Q ss_pred HHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhc
Q 022127 159 TMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIA 238 (302)
Q Consensus 159 ~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (302)
..+++.++.|+++||+++|+. + ..+..............++.+.......+.....+...+......+|..
T Consensus 264 ~~i~~~~~~G~l~dr~g~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~ 334 (393)
T PRK15011 264 LEIPTMLIAGYFAKRLGKRFL--------M-RVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLM 334 (393)
T ss_pred HHHHHHHHHHHHHHHhChHHH--------H-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 888899999999999997632 1 1222222222222223344444344444444444444455556678888
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhh
Q 022127 239 PDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 239 p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
|++++++.++.+...++|..++|.+.|.+.|+.| |+..+.+.+++.+++.+..+..
T Consensus 335 p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 335 PGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWN-YHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHhh
Confidence 9889999999999999999999999999999876 9989988888877777665544
No 24
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.95 E-value=6.1e-25 Score=185.51 Aligned_cols=268 Identities=15% Similarity=0.073 Sum_probs=188.7
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|+..+++.|++|+++|+++.++.....++|..+||.+++.+.+..+||+.|++.++..++..++. ..+|++++++++.+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~ 207 (417)
T PRK10489 129 TALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPL-LRLPALPPPPQPRE 207 (417)
T ss_pred HHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhCCCCCCCCcccc
Confidence 45677889999999999999999999999999999999999998999999998777666544443 44565543221111
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMA 161 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ 161 (302)
+ +.+. ....++..+++|.++...+..++.. .......++|.|.++.+|.++.+.+++.+...++..
T Consensus 208 ~-~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ 273 (417)
T PRK10489 208 H-PLRS------------LLAGFRFLLASPVVGGIALLGGLLT-MASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAA 273 (417)
T ss_pred c-chHH------------HHHHHHHHHcChHHHHHHHHHHHHH-HHHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHH
Confidence 0 0000 1123566778888766655554433 345667889999999889999999999999999999
Q ss_pred hhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-c
Q 022127 162 VSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-D 240 (302)
Q Consensus 162 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~ 240 (302)
++.++.+++.||.++++ .+ ..+..+..+....+...++.+.......+.+.+.+...+...+..++..| +
T Consensus 274 ig~~~~~~l~~~~~~~~--------~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 344 (417)
T PRK10489 274 LGALTSGWLAHSARPGL--------LM-LLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDE 344 (417)
T ss_pred HHHHHHHHhhhccCcch--------HH-HHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHH
Confidence 99999999999854432 11 23333444444444445554444444444444445445555677788877 7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHh
Q 022127 241 CAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNL 294 (302)
Q Consensus 241 ~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 294 (302)
+||+++|+.+...++|..++|.+.|.+.|..| +...+...+++.++..++...
T Consensus 345 ~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 397 (417)
T PRK10489 345 MLGRINGLWTAQNVTGDAIGAALLGGLGAMMT-PVASASASGFGLLIIGVLLLL 397 (417)
T ss_pred HHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc-hhhHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999887 666666555554444443333
No 25
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.95 E-value=1e-25 Score=191.64 Aligned_cols=283 Identities=14% Similarity=0.076 Sum_probs=195.6
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
+...+++.++++ ++|++++++.+.+..+|..++|++++.+.+.+|||+.|++.+++.++..+..++..++.+.++...+
T Consensus 127 ~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 205 (455)
T TIGR00892 127 QPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKS 205 (455)
T ss_pred hHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccc
Confidence 445677889996 7899999999999999999999999999999999999999998877655544443332221110000
Q ss_pred h-HHHHHHHhcCcc---c--ccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhH
Q 022127 82 K-SELRLIQAGKSD---S--VKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAV 155 (302)
Q Consensus 82 ~-~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~ 155 (302)
+ ++........++ + .++..+....+++++|+++......++.....+....++|.|.++ .|+++.+++...+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~ 284 (455)
T TIGR00892 206 KSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSI 284 (455)
T ss_pred cccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHH
Confidence 0 000000000000 0 000001111357899999988888887777777788899999987 79999999999999
Q ss_pred HHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHh
Q 022127 156 PWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQ 235 (302)
Q Consensus 156 ~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (302)
.+++.+++++..|++.||.+.++. ++.....+....++..+.....++.+.......+.+...+...+...+...
T Consensus 285 ~~~~~~~~~~~~g~l~d~~~~~~~-----~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~ 359 (455)
T TIGR00892 285 IGFVDIFARPSCGLIAGLKWIRPH-----VQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLM 359 (455)
T ss_pred HHHHHHHHHHHHHHHhcccccCHH-----HHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 999999999999999997432210 222222333333333333344455554444444555555556666677777
Q ss_pred hhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHH
Q 022127 236 EIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIF 291 (302)
Q Consensus 236 ~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 291 (302)
|..| ++++++.|+++...++|++++|.+.|.+.|..|+|+..|++.+++.+++.+.
T Consensus 360 ~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 360 DLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 7776 7899999999999999999999999999998877988888888777666553
No 26
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.95 E-value=2.8e-26 Score=191.27 Aligned_cols=270 Identities=17% Similarity=0.170 Sum_probs=186.6
Q ss_pred CchhhhhhhcccCccchhhHHHHHhhhhhhHHHHHH-HHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 022127 1 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGL-LLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPF 79 (302)
Q Consensus 1 ~p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~ 79 (302)
+|...+++.|++|+++|++++++.+.+..+|..+++ .+++.+.+..+||+.|++.+++.++..++.++..||+|++++.
T Consensus 101 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (379)
T TIGR00881 101 WPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGL 180 (379)
T ss_pred CCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCcccccc
Confidence 367788999999999999999999999999999999 5777777788999999998888877777777667776654322
Q ss_pred CChHHHH--HHHhcCc--ccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhH
Q 022127 80 VSKSELR--LIQAGKS--DSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAV 155 (302)
Q Consensus 80 ~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~ 155 (302)
.++++.+ +.+++.+ +++.+..+...++++++|.++...+..++..........+.|.|+++.+|.++.+.+...+.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 260 (379)
T TIGR00881 181 PPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTL 260 (379)
T ss_pred CccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 1111100 0000000 00111122345678899999999888888888888899999999998899999999999999
Q ss_pred HHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc--ccchHHHHHHHHHHHHHhhhhhhhhhhH
Q 022127 156 PWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY--AKSPAVAAVLITIALSLSSFSQAGYLLN 233 (302)
Q Consensus 156 ~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (302)
..++..++.++.|++.||..+++.. ................... ..+...........+.......+.....
T Consensus 261 ~~~~~~~~~~~~g~l~~r~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 334 (379)
T TIGR00881 261 YELGGLVGTLLAGWLSDKLFNGRRG------PLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVI 334 (379)
T ss_pred HHHHcchhHHHHHHHHHHHcCCcch------HHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 9999999999999999987544321 1111111111222222222 1222222222222222222223344556
Q ss_pred Hhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHH
Q 022127 234 IQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAF 277 (302)
Q Consensus 234 ~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~ 277 (302)
..|..| ++|+++.|+.+...++++.++|.+.|.+.|+.| |+..
T Consensus 335 ~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~ 378 (379)
T TIGR00881 335 ASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG-WAGA 378 (379)
T ss_pred HHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc-cccc
Confidence 677777 889999999999999999999999999999876 6643
No 27
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.95 E-value=1.4e-24 Score=186.01 Aligned_cols=272 Identities=11% Similarity=0.164 Sum_probs=194.3
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHh-hcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS-TIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFV 80 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (302)
++..+++.|++|+|||+++.++...+..+|.++++.+++++.+ ..|||..|++.+++.++..+..++ .||++++.+.
T Consensus 126 i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~-~~e~~~~~~~- 203 (491)
T PRK11010 126 IVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL-APEPTDTIPV- 203 (491)
T ss_pred HHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh-cCCCcccccc-
Confidence 3456888999999999999999999999999999999999988 579999999988877766544443 6664432111
Q ss_pred ChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhh-HHHHH
Q 022127 81 SKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSA-VPWGT 159 (302)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~-~~~~~ 159 (302)
++++++ +...++++.+++++.|...+..++..........+.+.|+.+..|+|+.+.+.... ...++
T Consensus 204 ~~~~~~------------~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~ 271 (491)
T PRK11010 204 PKTLEQ------------AVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLA 271 (491)
T ss_pred ccchhh------------hHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 000000 01124677888888887776666666666666778888887778999999999874 55679
Q ss_pred HHhhhhhhhcccchhhccCCchhHHHHHHHHHhhh--hhHHHHHHhhcc-cchHHHHHHHHHHHHHhhhhhhhhhhHHhh
Q 022127 160 MAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFI--GPGVSLLCLNYA-KSPAVAAVLITIALSLSSFSQAGYLLNIQE 236 (302)
Q Consensus 160 ~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (302)
.+++.+++|+++||+++|+ .+...+.. +........... ++.........+..+..+...+...+...+
T Consensus 272 ~iiG~ll~G~L~dr~g~~~--------~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~ 343 (491)
T PRK11010 272 TIVGALYGGILMQRLSLFR--------ALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMT 343 (491)
T ss_pred HHHHHHHHHHHHHHHhHHH--------HHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999753 22112211 111111222222 233222323333333445555666777788
Q ss_pred hcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhc
Q 022127 237 IAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 237 ~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
..+ +..++..|+.+...++|..+++.+.|.+.|..| |+..|.+.+++.+.+.+.....+
T Consensus 344 l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G-~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 344 LCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHG-WPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 777 778999999999999999999999999999887 99999999988888877766554
No 28
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.94 E-value=6.7e-25 Score=182.11 Aligned_cols=252 Identities=14% Similarity=0.084 Sum_probs=185.4
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|+..+++.|++|+++|++++++.+.+..+|..++|.+++.+.+..|||+.|++.++..++..+..+...+++++++++.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (365)
T TIGR00900 111 PAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQA 190 (365)
T ss_pred HHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCccccc
Confidence 56778999999999999999999999999999999999999999999999998777665544443332222221111111
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHH-hhhhHHHHHhhccchhhhhHHhhHHHHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLL-SWMPIYFNTVFNVNLKQAAWFSAVPWGTM 160 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~s~~~~~~~~~~~~~~~ 160 (302)
.++ +..+ +.....++++|+|.++......+.......... .+.|.|.++.+|.++.+.+.......++.
T Consensus 191 ~~~-~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (365)
T TIGR00900 191 LSN-AVLR---------DTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGA 260 (365)
T ss_pred cch-hHHH---------HHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 010 0000 011246778899999888887777777776666 88899998878999999999999999999
Q ss_pred HhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccc-hHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc
Q 022127 161 AVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKS-PAVAAVLITIALSLSSFSQAGYLLNIQEIAP 239 (302)
Q Consensus 161 ~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 239 (302)
.++.+..+++.||.++|+. ...+....++........++ .+.......+.+.+.+...+.......|..|
T Consensus 261 ~~~~~~~~~l~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 331 (365)
T TIGR00900 261 LLGALLLGLLGRYFKRMAL---------MTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVP 331 (365)
T ss_pred HHHHHHHHHHHHHhchhHH---------HHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999986521 12334444444444444442 4444455555556666666777788888877
Q ss_pred -chhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 022127 240 -DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 272 (302)
Q Consensus 240 -~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g 272 (302)
++|+++.|+.+...+++..++|.+.|.+.|..|
T Consensus 332 ~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 332 AELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 889999999999999999999999999988653
No 29
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.94 E-value=5e-25 Score=183.62 Aligned_cols=263 Identities=15% Similarity=0.152 Sum_probs=189.7
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
+.....+.|++| |+|++++++...+.++|..+++++.+.+.+..|||+.|++.+++.++..+..++..+|+|+++++.+
T Consensus 110 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (377)
T TIGR00890 110 GIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTN 188 (377)
T ss_pred HhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhccccC
Confidence 345567788887 5799999999999999998888788888888899999999998888877776666655443211100
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMA 161 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ 161 (302)
++ .++++.+.++.+|+|+++......++..........+.+.|.++ +|.+..+.+...+...++..
T Consensus 189 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 254 (377)
T TIGR00890 189 IE-------------VSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNG 254 (377)
T ss_pred cc-------------cchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHH
Confidence 00 00111245678899999888777777666666666777777766 78888889999999999999
Q ss_pred hhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccch--HHHHHHHHHHHHHhhhhhhhhhhHHhhhcc
Q 022127 162 VSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSP--AVAAVLITIALSLSSFSQAGYLLNIQEIAP 239 (302)
Q Consensus 162 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 239 (302)
++++..|++.||++||+.. ..+.....++.......++. ........+.+...+...+.......|..|
T Consensus 255 ~~~~~~g~l~dr~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~ 325 (377)
T TIGR00890 255 GGRPFLGALSDKIGRQKTM---------SIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFG 325 (377)
T ss_pred HHHHHHHHHHHHHhhhhhh---------hHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhh
Confidence 9999999999999876432 23334444444433333321 222222333334444444555667788777
Q ss_pred -chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHH
Q 022127 240 -DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTT 289 (302)
Q Consensus 240 -~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~ 289 (302)
++|+++.|+.+...++|..++|.+.|.+.|+.| |+..|.+.+++.+++.
T Consensus 326 ~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 326 PANSAANYGFLYTAKAVAGIFGGLIASHALTEIG-FEYTFIVTGAFALTSL 375 (377)
T ss_pred hhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhc-hhhHHHHHHHHHHHhc
Confidence 889999999999999999999999999999887 9999988887776654
No 30
>PRK03699 putative transporter; Provisional
Probab=99.94 E-value=8.9e-25 Score=183.04 Aligned_cols=267 Identities=15% Similarity=0.109 Sum_probs=187.6
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHh-hcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS-TIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFV 80 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (302)
|...+++.|++|+++|+++++..+....+|..++|.+.+.+.+ ..|||+.|.+.+++.++..++.++ ++.|+.+++.
T Consensus 114 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~--~~~p~~~~~~ 191 (394)
T PRK03699 114 SIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF--SEFPALGKHA 191 (394)
T ss_pred cchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh--cCCccccccC
Confidence 4567888999999999999999999999999999999888764 579999999988877665544332 2333211110
Q ss_pred ChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHH
Q 022127 81 SKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTM 160 (302)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~ 160 (302)
++ + + ++. .++ ..++.++...+..++.....+.+..|.|.|+++.+|+|+.+.+...+...++.
T Consensus 192 ~~-------~----~-~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~ 254 (394)
T PRK03699 192 PK-------A----D-KPV----AKE-KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAY 254 (394)
T ss_pred cc-------c----c-Ccc----ccc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHH
Confidence 00 0 0 000 011 12466777777777777777888899999998889999999999999999999
Q ss_pred HhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhccc
Q 022127 161 AVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAPD 240 (302)
Q Consensus 161 ~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 240 (302)
.+++++.|+++||+++|+.. .....+..+....+...++...........+++.+...+...+...+..|+
T Consensus 255 ~ig~~~~g~l~dr~~~~~~l---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 325 (394)
T PRK03699 255 MVGMWIFSFIVRFFDLQRIL---------TVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKV 325 (394)
T ss_pred HHHHHHHHHHHHHhchhhHH---------HHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 99999999999999876432 122223333333333344443333333334444444455555666677776
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhcc
Q 022127 241 CAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYST 297 (302)
Q Consensus 241 ~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (302)
++++..|......++|..++|.+.|++.|..| ++..++..+++.+++.+..+...+
T Consensus 326 ~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 326 ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFG-LQAALLTANGLYAVVFVMCILLGF 381 (394)
T ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC-chhhhhhhHHHHHHHHHHHHHHHH
Confidence 67888899999999999999999999999887 888888877777777655544433
No 31
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.94 E-value=2.5e-24 Score=180.09 Aligned_cols=265 Identities=13% Similarity=0.109 Sum_probs=187.3
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhc-CCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-GISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFV 80 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (302)
+...+++.|++| ++|+++++.+..+...|..+++.+++++.++. +||+.+.+.++..++.....+...+++|++++
T Consensus 116 ~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 192 (393)
T PRK09705 116 AVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVASSH-- 192 (393)
T ss_pred hhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc--
Confidence 456678899997 78999999999999999999999999998875 89999877666554433333222222222110
Q ss_pred ChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHH
Q 022127 81 SKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTM 160 (302)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~ 160 (302)
++ +...++.+++|+.|...+..++....++....|.|.|+++ +|.+..+++...+...++.
T Consensus 193 --~~----------------~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~ 253 (393)
T PRK09705 193 --KT----------------TTTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQ 253 (393)
T ss_pred --CC----------------CcCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHH
Confidence 00 0012345677888887777777777888889999999988 7999999999999999999
Q ss_pred HhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhh-cccchHHHHHHHHHHHHHhhhhhhhhhhHHhhh-c
Q 022127 161 AVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLN-YAKSPAVAAVLITIALSLSSFSQAGYLLNIQEI-A 238 (302)
Q Consensus 161 ~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 238 (302)
+++++..+++.||.++|+.. ..+..+..++...+. ..++... . ...+.+.+.+...+.......+. .
T Consensus 254 i~g~~~~g~l~~r~~~~~~~---------~~~~~l~~~~~~~~~~~~~~~~~-~-~~~l~g~g~g~~~~~~~~~~~~~~~ 322 (393)
T PRK09705 254 AAGALLMPAMARHQDRRKLL---------MLALVLQLVGFCGFIWLPLQLPV-L-WAMVCGLGLGGAFPLCLLLALDHSV 322 (393)
T ss_pred HHHHHHHHHHHhhccchHHH---------HHHHHHHHHHHHHHHHccchHHH-H-HHHHHHHhccchHHHHHHHHHhhcC
Confidence 99999999999999876321 123333333333222 2222221 1 12223333344444444444444 3
Q ss_pred c-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhccCc
Q 022127 239 P-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGE 299 (302)
Q Consensus 239 p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (302)
| +++++..|+.+...++++.++|.+.|++.|+.|++...|.+.+++.+++.+....+.+++
T Consensus 323 ~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (393)
T PRK09705 323 QPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPAR 384 (393)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccc
Confidence 4 678999999999999999999999999999998899999988888887777666665554
No 32
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.93 E-value=1.4e-23 Score=175.54 Aligned_cols=245 Identities=16% Similarity=0.102 Sum_probs=176.7
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|+..+++.|++|+++|++++++.+....+|..+++.+++.+.++.+||+.|++.+++.++..+..++..||+++++++.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (385)
T TIGR00710 112 VISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEARIQ 191 (385)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccCC
Confidence 45678899999999999999999999999999999999999999999999999888877766666665666544322111
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMA 161 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ 161 (302)
+++ ...+.++.+|+|+++...+.........+....+.|.++++.+|.++.+.+...+...++..
T Consensus 192 ~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~ 256 (385)
T TIGR00710 192 IST---------------YFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMI 256 (385)
T ss_pred HHH---------------HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 110 01245678899999888877777777777888889999988899999999999999999999
Q ss_pred hhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc---cc--chHHHHHHHHHHHHHhhhhhhhhhhHHhh
Q 022127 162 VSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY---AK--SPAVAAVLITIALSLSSFSQAGYLLNIQE 236 (302)
Q Consensus 162 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (302)
++.++.|++.||+++|+.. . .+.....++...+.. .. ..........+.+.+.+...+.......|
T Consensus 257 ~~~~~~g~l~~~~~~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 327 (385)
T TIGR00710 257 FGGFLNGRFIKKWGAKSLL-------R--MGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALE 327 (385)
T ss_pred HHHHHHHHHHHhcCHHHHH-------H--HHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999876321 1 222222222222111 11 12222223333444455555666666677
Q ss_pred hccchhhhHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 022127 237 IAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQW 270 (302)
Q Consensus 237 ~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~ 270 (302)
..|++++++.++.+.....++.+.+.+.+.+.+.
T Consensus 328 ~~~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~ 361 (385)
T TIGR00710 328 DFPHVAGTASALFGTLRLVLGAIVGYLVSLIHGN 361 (385)
T ss_pred cCcccchHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 7788899999999999887777777677755443
No 33
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.93 E-value=2.3e-23 Score=175.34 Aligned_cols=251 Identities=9% Similarity=0.008 Sum_probs=180.4
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|...+.+.|++|+++|.+.+++......+|..++|.+++.+.++.+||+.|++.+++.++..+..++..||+++++++..
T Consensus 120 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (406)
T PRK15402 120 AVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKL 199 (406)
T ss_pred HHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCccccccc
Confidence 45667889999999999999999999999999999999999999999999999888887766655555666543221110
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMA 161 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ 161 (302)
+ .+. ...+++++++||+++...+..++..........+.|.|+++.+|.++.+.+.......++..
T Consensus 200 ~--~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~ 265 (406)
T PRK15402 200 S--LKE------------LGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALI 265 (406)
T ss_pred c--HHH------------HHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 0 000 11246788999999888877777666666677778999888899999999988877788889
Q ss_pred hhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc-----ccchHHHHHHHHHHHHHhhhhhhhhhhHHhh
Q 022127 162 VSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY-----AKSPAVAAVLITIALSLSSFSQAGYLLNIQE 236 (302)
Q Consensus 162 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (302)
++.++.+++.||+++|+. + ..+.+...++...... ..+.+.......+.+.+.+...+........
T Consensus 266 ~g~~~~g~l~~r~~~~~~--------~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~ 336 (406)
T PRK15402 266 AGNLTLARLTSRRPLRSL--------I-RMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLF 336 (406)
T ss_pred HHHHHHHHHHHhcCHHHH--------H-HHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhh
Confidence 999999999999987532 1 2333333333222221 1223333333444444444444555454555
Q ss_pred hccchhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchh
Q 022127 237 IAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQ 275 (302)
Q Consensus 237 ~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~ 275 (302)
..|+++|+..+..+....++..+|+.+.+.+.+..+.+.
T Consensus 337 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 375 (406)
T PRK15402 337 SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGL 375 (406)
T ss_pred hccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHH
Confidence 556889999999999999999999999999998877444
No 34
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.93 E-value=2.6e-23 Score=173.45 Aligned_cols=274 Identities=12% Similarity=0.058 Sum_probs=181.6
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|...+++.|++|+|+|++++++.+....+|..++|.+++.+.+..+||+.|++.+.+.++..+...+..||+++++++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (377)
T PRK11102 98 VVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETLPKERRQP 177 (377)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccCcccccCC
Confidence 45678899999999999999999999999999999999999999999999999888887766666666666543321111
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMA 161 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ 161 (302)
.+.++ ...+.++.+++|+++...+..++.....+....+.|.++.+.+|.++.+.+.......++..
T Consensus 178 ~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~ 244 (377)
T PRK11102 178 FHLRT-------------TIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLF 244 (377)
T ss_pred CChHH-------------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 10000 11245678889988887777777777777777888888888889999999999999999999
Q ss_pred hhhhhhhcccchhhccCCchhHHHHHHHHHhhhh---hHHHHHHhhccc-chHHHHHHHHHHHHHhhhhhhhhhhHHhhh
Q 022127 162 VSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIG---PGVSLLCLNYAK-SPAVAAVLITIALSLSSFSQAGYLLNIQEI 237 (302)
Q Consensus 162 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (302)
++.+..|++.||+++|+.. ..+... ..+........+ +.+.......+.....+...........|.
T Consensus 245 ~~~~~~g~l~~r~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (377)
T PRK11102 245 VMTIINSRFVRRVGALNML---------RFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDE 315 (377)
T ss_pred HHHHHHHHHHHHhCHHHHH---------HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcc
Confidence 9999999999999976321 122211 122222222222 222222222222233333334444556777
Q ss_pred ccchhhhHHHHHHHHHH-HHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhccCcc
Q 022127 238 APDCAGFLHGIANSAGT-LAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGER 300 (302)
Q Consensus 238 ~p~~~~~~~g~~~~~~~-~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (302)
.|++++++.++.+.... ++..+++.+.+. .+. ++...+...+++.+++.+..++..++++
T Consensus 316 ~~~~~g~~~~~~~~~~~~~g~~~g~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (377)
T PRK11102 316 FPHMAGTASSLAGTLRFGIGAIVGALLSLA-PFT--SAWPMVWSMAFCSILSILFYLYASRPKK 376 (377)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHhc-cCC--ChHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 78889999999877654 556666665443 222 2333444444444555555555555443
No 35
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.93 E-value=1.6e-23 Score=174.73 Aligned_cols=261 Identities=10% Similarity=0.009 Sum_probs=196.5
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|...++..|+ ++||++..|......++|.+++|++++.+.+++|||..|++.+... +..+.... .+|+++++++.+
T Consensus 113 p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~-~~~~~~~~-~~~~~~~~~~~~ 188 (382)
T TIGR00902 113 PIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGL-AFMLIGFL-IKPTIPPKDAIP 188 (382)
T ss_pred hHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHH-HHHHHHHH-cCCCCCCCcccc
Confidence 4555666554 4778999999999999999999999999999999999998876543 22223333 333322111100
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMA 161 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ 161 (302)
++ +++...+.++++|||+++...+..++..........+.|.|+++ .|.++.+.|.......++.+
T Consensus 189 ~~-------------~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i 254 (382)
T TIGR00902 189 ED-------------ESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEI 254 (382)
T ss_pred cc-------------ccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHH
Confidence 00 00112246789999999999998888888888899999999988 89999999999998889999
Q ss_pred hhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhccch
Q 022127 162 VSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAPDC 241 (302)
Q Consensus 162 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 241 (302)
++.+..+++.||+++| + .+..+.+...+........++.+.......+-+...+...+....++++..+++
T Consensus 255 ~~~~~~~~l~~r~g~~--------~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~~~~~ 325 (382)
T TIGR00902 255 IIFAFSNKLFQNCSAR--------D-LLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQPGSE 325 (382)
T ss_pred HHHHHhHHHHhhCCHH--------H-HHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh
Confidence 9999999999999864 2 224666666766666676777776666677777777777777777788773378
Q ss_pred hhhHHHHHHH-HHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHH
Q 022127 242 AGFLHGIANS-AGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIF 291 (302)
Q Consensus 242 ~~~~~g~~~~-~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 291 (302)
+++..++++. ...+|..++|.+.|++.|+.| + ..|...+++.+++.++
T Consensus 326 ~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 326 IAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-A-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHHHHH
Confidence 8999999874 567899999999999999986 4 6677777777665433
No 36
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.93 E-value=4.4e-24 Score=183.62 Aligned_cols=259 Identities=15% Similarity=0.057 Sum_probs=188.0
Q ss_pred chhhhhhhccc-CccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCC
Q 022127 2 PAMSTLTSRWF-PSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFV 80 (302)
Q Consensus 2 p~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (302)
|.....+.+++ |+++|++++|+......+|..+||.+++.+.++.|||+.|++...+.++..++..+.+||+++++++.
T Consensus 113 ~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~ 192 (495)
T PRK14995 113 PATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQP 192 (495)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 44556666665 67899999999999999999999999999999999999999988888877777777777765433221
Q ss_pred ChHHHH------------HHHhcCc------------------------ccccCCCCcchHHhhcCccHHHHHHHHHhhh
Q 022127 81 SKSELR------------LIQAGKS------------------------DSVKKRNPPSLRHLLSKLPSWTVIIANITNN 124 (302)
Q Consensus 81 ~~~~~~------------~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (302)
.+.... ..++..+ .|.+.+.+.-..+++|+|.+....+..++..
T Consensus 193 ~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~ 272 (495)
T PRK14995 193 LNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAM 272 (495)
T ss_pred CChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHH
Confidence 111100 0000000 0111122223357899999988888888888
Q ss_pred HHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhh
Q 022127 125 WGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLN 204 (302)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (302)
...+....+.|.|+++.+|+|+.++|.......++..+++++.|++.||+++|+. ...+..+..++...+.
T Consensus 273 ~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~---------~~~g~~~~~~~~~~l~ 343 (495)
T PRK14995 273 ITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLV---------ATGGMALSALSFYGLA 343 (495)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH---------HHHHHHHHHHHHHHHH
Confidence 8888888999999999999999999999999999999999999999999997532 1234444443333322
Q ss_pred c---ccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhc
Q 022127 205 Y---AKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ 269 (302)
Q Consensus 205 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~ 269 (302)
. .++.+.......+.+.+.+...+.......+..| ++++.+.++.++.+++|+.+|+.+.|.+.+
T Consensus 344 ~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 344 MTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2233333444555556666666666666666666 889999999999999999999999998864
No 37
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.93 E-value=7.1e-24 Score=176.52 Aligned_cols=263 Identities=16% Similarity=0.127 Sum_probs=186.4
Q ss_pred CchhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHH-----h-------------hcCCchHHHHHHHHHHHH
Q 022127 1 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML-----S-------------TIGISGPFILFSSLGLLW 62 (302)
Q Consensus 1 ~p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~-----~-------------~~gwr~~f~~~~~~~~~~ 62 (302)
|++.++.+++|+|++|||+++|+.....++|..+++.+...+. + ..+||...++..++.++.
T Consensus 145 f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~ 224 (462)
T PRK15034 145 FASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIA 224 (462)
T ss_pred HHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHH
Confidence 4677889999999999999999998777788877766665433 2 233677777777777776
Q ss_pred HHHHHhhhcCCCCCCCCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhh
Q 022127 63 LSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVF 142 (302)
Q Consensus 63 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (302)
.++.++..+|.|+++. + ..+.++.+|+|+.|.+.+.+++.+..+.++..++|.|.++.+
T Consensus 225 ~i~~~~~~~~~~~~~~--~-------------------~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~ 283 (462)
T PRK15034 225 TIAAWSGMNDIASSRA--S-------------------IADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF 283 (462)
T ss_pred HHHHHHhCCCcccccc--C-------------------HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 6666665544332110 1 113567899999999999999999999999999999998855
Q ss_pred ccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHH----HHhhcc--cchHHHHHHH
Q 022127 143 NVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSL----LCLNYA--KSPAVAAVLI 216 (302)
Q Consensus 143 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~ 216 (302)
+............+...+.++++|+++||+|+++.. . .+.+...+.. ...... .+.+.....+
T Consensus 284 --~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl-------~--~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~ 352 (462)
T PRK15034 284 --PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVT-------L--INFIFMAIFSALLFLTLPGTGSGNFIAFYAVF 352 (462)
T ss_pred --ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHH-------H--HHHHHHHHHHHHHHHHhccccccHHHHHHHHH
Confidence 333333334445678888999999999999986432 1 2222111111 111111 1233344444
Q ss_pred HHHHHHhhhhhhhhhhHHhhhccc----------------------hhhhHHHHHHHHHHHHHHHHHHHhhhhhccccch
Q 022127 217 TIALSLSSFSQAGYLLNIQEIAPD----------------------CAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSF 274 (302)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~p~----------------------~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~ 274 (302)
.......+......+.++.+.+|+ +.|.+.|+....+.+|+++-|.+.|...+.+|++
T Consensus 353 ~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~ 432 (462)
T PRK15034 353 MGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSP 432 (462)
T ss_pred HHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCc
Confidence 444456677777777777666653 6788999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhh
Q 022127 275 QAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~ 295 (302)
...|+...+..+++.++.+..
T Consensus 433 ~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 433 VGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888887765443
No 38
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.93 E-value=1.1e-23 Score=177.61 Aligned_cols=269 Identities=13% Similarity=0.112 Sum_probs=187.1
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|...+++.|++|+++|++++++...+..+|..++|.+++.+.+..+||+.|++.+++.++..+...+..||++++.++.+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (408)
T PRK09874 125 PNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKE 204 (408)
T ss_pred HhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchh
Confidence 45567888999999999999999999999999999999999999999999999888877766666666666543211110
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHH-HHHHhhhHHHHHHHhhhhHHHHHhhccchh---hhhHHhhHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVI-IANITNNWGYFVLLSWMPIYFNTVFNVNLK---QAAWFSAVPW 157 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~---~~~~~~~~~~ 157 (302)
+.+ . .+..+.+++|+++... ...+...........++|.|.++..+.... ..+.+.....
T Consensus 205 ~~~---~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 268 (408)
T PRK09874 205 MLH---M-------------REVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPG 268 (408)
T ss_pred hhH---H-------------HHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 000 0 0123456777765433 333333444455667788888874432221 2345556667
Q ss_pred HHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhh
Q 022127 158 GTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEI 237 (302)
Q Consensus 158 ~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (302)
++..++.+..|++.||+++|+.. ..+.....+........++.+.......+.+.+.+...+.......+.
T Consensus 269 l~~~~~~~~~g~l~dr~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 269 VAALLSAPRLGKLGDRIGPEKIL---------ITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHhccccchhH---------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 88888899999999999976432 133333333333334444444444444445555566666666666776
Q ss_pred cc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhc
Q 022127 238 AP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 238 ~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
.| +++|+.++..+...++|..++|.+.|.+.|..| |+..|.+.+++.+++.+......
T Consensus 340 ~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 340 SSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYG-FRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred CCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcc-hhHHHHHHHHHHHHHHHHHHHHH
Confidence 66 789999999999999999999999999999886 99999999988888777665433
No 39
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.93 E-value=4.4e-24 Score=179.00 Aligned_cols=262 Identities=15% Similarity=0.141 Sum_probs=182.4
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHH--------hhcCCchHHHHHHHHHHHHHHHHHhhhcCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML--------STIGISGPFILFSSLGLLWLSTWTSKVTND 73 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~ 73 (302)
|+..+++.|++|+++|++..++.+.+..+|..+++.++..+. +.++||+.|.+.+++.++.. ......||+
T Consensus 115 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~ 193 (394)
T TIGR00883 115 GGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGL-YLRRNLEET 193 (394)
T ss_pred cccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHH-HHHHhcCCC
Confidence 566788999999999999999999999999999998877664 35799999998766555433 222334443
Q ss_pred CCCCCCCChHHHHHHHhcCcccccCCCCcchHHhhcCcc--HHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhH
Q 022127 74 PCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLP--SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAW 151 (302)
Q Consensus 74 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~ 151 (302)
|+.++ +++ ++++.+.+.++.+++++ ++......++.....+....+.|.|+++.+|.++.+.+.
T Consensus 194 ~~~~~-----~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 259 (394)
T TIGR00883 194 PVFEK-----AQE---------KHKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALL 259 (394)
T ss_pred hhHHH-----HHh---------ccccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHH
Confidence 32110 000 01112335677777766 777777777777777788899999998878999999999
Q ss_pred HhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHH--HH-HhhcccchHHHHHHHHHHHHHhhhhhh
Q 022127 152 FSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVS--LL-CLNYAKSPAVAAVLITIALSLSSFSQA 228 (302)
Q Consensus 152 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (302)
......+...++.++.|++.||+++|+. ....+....... .. .....++.+.......+.+...+...+
T Consensus 260 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 331 (394)
T TIGR00883 260 VLMLSLILFFITIPLSGALSDRIGRRPV--------LIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTG 331 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchHHH--------HHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999997632 111222221111 11 111123334434444445555556677
Q ss_pred hhhhHHhhhcc-chhhhHHHHH-HHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHH
Q 022127 229 GYLLNIQEIAP-DCAGFLHGIA-NSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYF 286 (302)
Q Consensus 229 ~~~~~~~~~~p-~~~~~~~g~~-~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~ 286 (302)
.......|..| ++|+++.|+. +....+|..++|.+.|.+.|+.|.++..++......+
T Consensus 332 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 332 PMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred hHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 77888889888 7899999985 4455678889999999999988767666665555443
No 40
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.93 E-value=5.7e-25 Score=181.69 Aligned_cols=245 Identities=24% Similarity=0.343 Sum_probs=179.3
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|+..+++.|++|+|+|++++++.+...++|..+++.+++.+.+..+||+.|++.+++.++..++.....+++|++++..+
T Consensus 104 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~ 183 (352)
T PF07690_consen 104 PASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERES 183 (352)
T ss_dssp HHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--S
T ss_pred ccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhccccccccc
Confidence 56788999999999999999999999999999999999999989999999999999888877654455555554433322
Q ss_pred hHHHH-HHHhcCcccccCCCCc-chHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccc-hhhhhHHhhHHHH
Q 022127 82 KSELR-LIQAGKSDSVKKRNPP-SLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVN-LKQAAWFSAVPWG 158 (302)
Q Consensus 82 ~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s-~~~~~~~~~~~~~ 158 (302)
+++++ ..+ ++.. .+++++++|.+|......+...........+.|.|+++.+|.+ ..+.+...+...+
T Consensus 184 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 254 (352)
T PF07690_consen 184 PKESESKKP---------KPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGI 254 (352)
T ss_dssp STTTT--HH---------HCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHH
T ss_pred ccccccccc---------cccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHH
Confidence 22210 000 1111 3677888888886666666666677788999999988889999 8899999999999
Q ss_pred HHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhc
Q 022127 159 TMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIA 238 (302)
Q Consensus 159 ~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (302)
...++.++.|++.||+++++ +.........+....+......++.........+.+.+.+...+.......+..
T Consensus 255 ~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 328 (352)
T PF07690_consen 255 VGIIGSLLAGRLSDRFGRRR------RLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELV 328 (352)
T ss_dssp HHHHHHHHHHHHHHHTTCHH------HHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHcCcHH------HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999998752 122222222222222222222333444444455555567777888888889988
Q ss_pred c-chhhhHHHHHHHHHHHHHHHHH
Q 022127 239 P-DCAGFLHGIANSAGTLAAIIST 261 (302)
Q Consensus 239 p-~~~~~~~g~~~~~~~~g~~i~~ 261 (302)
| +++|++.|+.+...++++.++|
T Consensus 329 ~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 329 PPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCC
Confidence 7 8999999999999999999987
No 41
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.93 E-value=1.4e-23 Score=175.81 Aligned_cols=268 Identities=13% Similarity=0.089 Sum_probs=181.6
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|+..+++.|++|+|+|++++++.....++|..+||.+++.+. .+|||+.|++.++..++..++..+..||.+++ +.
T Consensus 118 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~-~~-- 193 (400)
T PRK11646 118 PPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLS-TV-- 193 (400)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCccccc-cc--
Confidence 566788999999999999999999999999999999999998 77999999998877776655544545542211 00
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMA 161 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ 161 (302)
++ +.+.++++.+++|+++...+..+...........+.|.|+++..+ ++.+.+...+...+...
T Consensus 194 ~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~ 257 (400)
T PRK11646 194 RT---------------PVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSL 257 (400)
T ss_pred ch---------------hhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHH
Confidence 00 011246778899988766655554444444456788999988544 77788888777776666
Q ss_pred hhhhhhhcccch-hhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-
Q 022127 162 VSGYMAGKASDS-LIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP- 239 (302)
Q Consensus 162 ~~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p- 239 (302)
.+....+++.|| .+.+ +.+ ..+..+..++...+...++.+.......+...+.+...+...+...+..|
T Consensus 258 ~~~~~~~~~~~~r~~~~--------~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~ 328 (400)
T PRK11646 258 TLLYPIARWSEKRFRLE--------HRL-MAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADA 328 (400)
T ss_pred HHHHHHHHHHHHhcchh--------HHH-HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCc
Confidence 555555555554 4322 211 24444444455444445554443333334444455556666777888777
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccc---hhHHHHHHHHHHHHHHHHHHhhccC
Q 022127 240 DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGS---FQAFLTVTAGLYFVTTIFWNLYSTG 298 (302)
Q Consensus 240 ~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (302)
+++|++.|+.+...++|..+||.+.|.+.|+.++ ....+...+.+.+++.+......|+
T Consensus 329 ~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (400)
T PRK11646 329 RARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLALYWQFSQ 390 (400)
T ss_pred ccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHHhh
Confidence 8999999999999999999999999999998542 3456666666666665554443333
No 42
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.93 E-value=8.1e-25 Score=183.64 Aligned_cols=273 Identities=17% Similarity=0.090 Sum_probs=192.0
Q ss_pred CchhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHh------hcCCchHHHHHHHHHHHHHHHHHhhhcCCC
Q 022127 1 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS------TIGISGPFILFSSLGLLWLSTWTSKVTNDP 74 (302)
Q Consensus 1 ~p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p 74 (302)
||+...+++.|+.++||++.++++.+..++|.++|.+++..+.+ ..||||.|.+.|++.++..++.++++|++|
T Consensus 152 wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P 231 (495)
T KOG2533|consen 152 WPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNP 231 (495)
T ss_pred chHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCCh
Confidence 68999999999999999999999999999999999999988643 469999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHhcCc----cc-ccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhh
Q 022127 75 CNSPFVSKSELRLIQAGKS----DS-VKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQA 149 (302)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~ 149 (302)
++.+..+++|++...++.+ .+ .++.++..+++.+++|++|...+..++.....+++.+|+|.|+++..|+|..++
T Consensus 232 ~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a 311 (495)
T KOG2533|consen 232 SKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQA 311 (495)
T ss_pred hhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHh
Confidence 9887777777543322222 11 122455678899999999999999999999999999999999999667999999
Q ss_pred hHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhh
Q 022127 150 AWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAG 229 (302)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (302)
..+..+..++++++.+++|.++||+..- ...|........+...++...+...............+........+.
T Consensus 312 ~~ls~~~~~~g~v~~i~ag~lsdr~~~~----~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (495)
T KOG2533|consen 312 NLLSTPYDVGGIVGLILAGYLSDRLKTI----FARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAII 387 (495)
T ss_pred ccccchHHhhhHHHHHHHHHHHHHHhhh----HHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHH
Confidence 9999999999999999999999996400 001222222333333444333333332332222222222333333344
Q ss_pred hhhHHhhhc-c-chhhhHHHHHHHHHHHHHHHHHHHhhh-hhccccchhHHH
Q 022127 230 YLLNIQEIA-P-DCAGFLHGIANSAGTLAAIISTIGTGY-FVQWLGSFQAFL 278 (302)
Q Consensus 230 ~~~~~~~~~-p-~~~~~~~g~~~~~~~~g~~i~~~i~g~-l~~~~g~~~~~~ 278 (302)
.....++.. + .++-+..+......+.++.++|.+.-. .....+ +...|
T Consensus 388 ~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~-~~~~f 438 (495)
T KOG2533|consen 388 ALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYG-WGAVF 438 (495)
T ss_pred HHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchh-hhhHH
Confidence 444444433 3 334455555555666666666555433 333333 55555
No 43
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.93 E-value=7.2e-24 Score=178.44 Aligned_cols=270 Identities=13% Similarity=0.094 Sum_probs=172.1
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcC--CchHHHHHHHHHHHHHHHHHhhhcCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG--ISGPFILFSSLGLLWLSTWTSKVTNDPCNSPF 79 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g--wr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~ 79 (302)
|...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+ ||+.|.+.++..++. ++.....||+++.++.
T Consensus 119 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~ 197 (405)
T TIGR00891 119 GSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA-LWLRKNIPEAEDWKEK 197 (405)
T ss_pred HHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH-HHHHHhCCCChhHHHH
Confidence 5667889999999999999999999999999999999999988776 999998865544443 3344445665432111
Q ss_pred CChHH--HHHHHhcCcccc-cCC----CCcchHHhhcCc--cHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhh
Q 022127 80 VSKSE--LRLIQAGKSDSV-KKR----NPPSLRHLLSKL--PSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAA 150 (302)
Q Consensus 80 ~~~~~--~~~~~~~~~~~~-~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~ 150 (302)
.++++ ++..++..++++ .+. .....++..+++ .+...................++|.|+++.+|++..+.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~ 277 (405)
T TIGR00891 198 HAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVA 277 (405)
T ss_pred hhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHH
Confidence 11000 000000000000 000 000011111111 122233333334445556667899999888999999999
Q ss_pred HHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHH-HHHHhhcccchHHHHHHHHHHHHHhhhhhhh
Q 022127 151 WFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGV-SLLCLNYAKSPAVAAVLITIALSLSSFSQAG 229 (302)
Q Consensus 151 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (302)
...+...++..++.++.|++.||+++|+... .+.....+ ........++.+.......+.+.......+.
T Consensus 278 ~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (405)
T TIGR00891 278 NIVVFSNIGAIVGGCVFGFLGDWLGRRKAYV---------CSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGI 348 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchhhhH---------HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhh
Confidence 9999999999999999999999999874321 22222211 1222222333333333323333333444455
Q ss_pred hhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHH
Q 022127 230 YLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVT 281 (302)
Q Consensus 230 ~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~ 281 (302)
......|..| ++|+++.|+.+...++++.++|.+.|.+.|+.|+|+..+...
T Consensus 349 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 349 LPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALASL 401 (405)
T ss_pred HHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHhh
Confidence 6677788887 889999999999999999999999999999988777666543
No 44
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.93 E-value=1.9e-23 Score=174.60 Aligned_cols=279 Identities=16% Similarity=0.085 Sum_probs=189.4
Q ss_pred CchhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCC
Q 022127 1 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFV 80 (302)
Q Consensus 1 ~p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (302)
+|+..+++.|++|+|||++++++.+...++|.++||.+++.+.+. .|+..+.+.+...++. .+..+.+||+|+++++.
T Consensus 106 ~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~ 183 (393)
T PRK11195 106 SPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLA-ALFNLFIPRLGARRPGQ 183 (393)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHhcCCCCccccccc
Confidence 478899999999999999999999999999999999999999875 4777777765544333 33445577765433221
Q ss_pred ChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHH
Q 022127 81 SKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTM 160 (302)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~ 160 (302)
++++....++ .....++++++|.+........+............|.|+++.+|.++.+.|...+...++.
T Consensus 184 ~~~~~~~~~~---------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~ 254 (393)
T PRK11195 184 SWNPIALLRD---------FFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGI 254 (393)
T ss_pred CCCHHHHHHH---------HHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHH
Confidence 1111111110 0113467788888776555555545555566677788888889999999999999999999
Q ss_pred HhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhccc
Q 022127 161 AVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAPD 240 (302)
Q Consensus 161 ~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 240 (302)
.++++..+++.||.++++.. ..+... +.....+...++.+.......+.+.+.+...++..+..++..|+
T Consensus 255 i~g~~~~~~l~~~~~~~~~~---------~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~ 324 (393)
T PRK11195 255 AVGAGAAARLVTLETVLRVL---------PAGILM-GLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGHV 324 (393)
T ss_pred HHHHHHHHHHhcCCcccchH---------HHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcc
Confidence 99999999999987765321 123222 22222333334444344444455555666666677777887775
Q ss_pred h--hhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhc---cCcccC
Q 022127 241 C--AGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYS---TGERVF 302 (302)
Q Consensus 241 ~--~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 302 (302)
+ +|++.++.+..++++..++..+.+.+ +..| .+..+.+.+...+++..+.+.++ +++|||
T Consensus 325 ~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK11195 325 LVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLG-VPVVAVIVGFGLLVALAMALLWRWHRRNQRQF 389 (393)
T ss_pred cccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcC-CCHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 3 69999999999999999999999966 5555 66666666655556555544443 344554
No 45
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.93 E-value=1e-23 Score=181.63 Aligned_cols=260 Identities=13% Similarity=0.027 Sum_probs=188.1
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|...+++.|++|+++|++++++...+..+|..++|.+++++.++.|||+.|++.+.++++..++..+..||+++++++..
T Consensus 109 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (485)
T TIGR00711 109 PLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENF 188 (485)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCC
Confidence 56778999999999999999999999999999999999999999999999999888887776666666666543322111
Q ss_pred hHHHH------------HHHhcCcc-------------------------cccCCCCcchHHhhcCccHHHHHHHHHhhh
Q 022127 82 KSELR------------LIQAGKSD-------------------------SVKKRNPPSLRHLLSKLPSWTVIIANITNN 124 (302)
Q Consensus 82 ~~~~~------------~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (302)
+.... ...+..+. +.+++++....+++++|+++...+..++..
T Consensus 189 d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (485)
T TIGR00711 189 DFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLG 268 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHH
Confidence 11000 00000000 011112222346889999998888888888
Q ss_pred HHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhh
Q 022127 125 WGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLN 204 (302)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (302)
...+....++|.|+++.+|.++.+++.......++..++.++.|++.||+++|+. ...+..+..++...+.
T Consensus 269 ~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~---------~~~g~~~~~~~~~~~~ 339 (485)
T TIGR00711 269 LGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKL---------VTIGLILYAVGFYWRA 339 (485)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHH---------HHHHHHHHHHHHHHHh
Confidence 8888888999999999899999999999999999999999999999999987532 2244444444444433
Q ss_pred --cc--cchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 022127 205 --YA--KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQW 270 (302)
Q Consensus 205 --~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~ 270 (302)
.. .+.+.......+.+++.+...++......+..| ++++++.|+.+..+++|+.+|+.+.+.+.++
T Consensus 340 ~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 340 FTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 123333334444555555555555555555555 8999999999999999999999999998764
No 46
>PRK15075 citrate-proton symporter; Provisional
Probab=99.92 E-value=3e-23 Score=175.88 Aligned_cols=247 Identities=11% Similarity=0.059 Sum_probs=157.1
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHH--------hhcCCchHHHHHHHHHHHHHHHHHhhhcCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML--------STIGISGPFILFSSLGLLWLSTWTSKVTND 73 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~ 73 (302)
|+..++++|++|+++|++++++...+.++|..+++.+++.+. +.+|||+.|++..... ... +..++.
T Consensus 136 ~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~-~~~----~~~~~~ 210 (434)
T PRK15075 136 GGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIV-PFI----FLIRRS 210 (434)
T ss_pred HHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHH-HHH----HHHHHh
Confidence 556788999999999999999999999999888888887763 4689999999744322 111 112222
Q ss_pred CCCCCCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHH-HHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHH
Q 022127 74 PCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTV-IIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 152 (302)
Q Consensus 74 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~ 152 (302)
+++.+ +.+++ ++ +.+.+..+++..++++.+.. ....+......+....|.|.|+++.+|++..+.++.
T Consensus 211 ~~e~~---~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~ 279 (434)
T PRK15075 211 LEETE---EFLAR--KH------RPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLV 279 (434)
T ss_pred cCCCH---HHHHh--hh------ccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 22111 00000 00 00111224445566555543 333444556677788999999998889999999888
Q ss_pred hhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHH---HhhcccchHHHHHHHHHHHHHhhhhhhh
Q 022127 153 SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLL---CLNYAKSPAVAAVLITIALSLSSFSQAG 229 (302)
Q Consensus 153 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (302)
.....+++.++.++.|+++||++||+.. ............. .....++.........+.+.+.+...+.
T Consensus 280 ~~~~~~~~~~~~~~~g~l~Dr~g~r~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 351 (434)
T PRK15075 280 TLCVGVSNFIWLPIGGALSDRIGRRPVL--------IAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGA 351 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchHHH--------HHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhh
Confidence 8888999999999999999999986421 1111111111111 1111222222222222233344444455
Q ss_pred hhhHHhhhcc-chhhhHHHHHHHHHHH-HHHHHHHHhhhhhcccc
Q 022127 230 YLLNIQEIAP-DCAGFLHGIANSAGTL-AAIISTIGTGYFVQWLG 272 (302)
Q Consensus 230 ~~~~~~~~~p-~~~~~~~g~~~~~~~~-g~~i~~~i~g~l~~~~g 272 (302)
......|..| +.|+++.|+.+..... ++.++|.+.|++.|+.|
T Consensus 352 ~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 352 MVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred HHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 5667788888 8899999997665554 58899999999999877
No 47
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.92 E-value=2.3e-22 Score=169.00 Aligned_cols=270 Identities=13% Similarity=0.117 Sum_probs=177.3
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhh-cCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST-IGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFV 80 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (302)
|+..+++.|++|+|||+++.++...+.++|..+++.+++.+.+. .|||..|++.+++.++..+. .+..||+++++++
T Consensus 113 ~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~-~~~~~e~~~~~~~- 190 (402)
T PRK11902 113 IVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT-TLWAPEPEVPARP- 190 (402)
T ss_pred HHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH-HHhcCCCcccccc-
Confidence 56678899999999999999999999999999999999999885 59999999988877665443 3445554332211
Q ss_pred ChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHH-HH
Q 022127 81 SKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPW-GT 159 (302)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~-~~ 159 (302)
+++.++. .+.++++++|||.++...+..++..........+.+.++.+.+|+++.+.+......+ .+
T Consensus 191 ~~~~~~~------------~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~ 258 (402)
T PRK11902 191 PRSLGEA------------VVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAA 258 (402)
T ss_pred cchhHHH------------HHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHH
Confidence 1111000 1225778999999988777766665554444445556666768999999999876554 46
Q ss_pred HHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhH---HHHHHhhcc-cchHHHHHHHHHHHHHhhhhhhhhhhHHh
Q 022127 160 MAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPG---VSLLCLNYA-KSPAVAAVLITIALSLSSFSQAGYLLNIQ 235 (302)
Q Consensus 160 ~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (302)
.+++.+++|++.||+++|+. . ..+..... +........ ++.+.......+..+..+...........
T Consensus 259 ~i~g~~~~g~l~~r~g~~~~--------l-~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 329 (402)
T PRK11902 259 TIVGALAGGTLMVRLGLYRS--------L-MLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLM 329 (402)
T ss_pred HHHHHHHHHHHHHHHhHHHH--------H-HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999987532 1 12222212 222222232 33333333332222333333333344333
Q ss_pred hhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhh
Q 022127 236 EIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 236 ~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
...+ +..++..+..+...+++..+++.+.|.+.|+.| |+..|.+.+.+.+++.++....
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G-~~~~f~~~~~~~~~~~~~~~~~ 389 (402)
T PRK11902 330 ALCNRSFSATQYALLSALASVGRVYVGPTSGYLVEAYG-WPGFYLMTVVIALPGLALLWLM 389 (402)
T ss_pred HhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHH
Confidence 3333 333445566666777888877789999999997 9999999888887776655433
No 48
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.92 E-value=4e-23 Score=175.12 Aligned_cols=259 Identities=13% Similarity=0.118 Sum_probs=164.5
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|....++.|++|+|+|++++++...+.++|.++++.+.+.+.+..|||+.|++.....++ .+......||+++ .
T Consensus 125 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~-~~~~~~~~p~~~~---~-- 198 (426)
T PRK12307 125 ACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLL-VIYIRARAPESKE---W-- 198 (426)
T ss_pred HHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHH-HHHHHHHCCCChH---H--
Confidence 566788999999999999999999999999999999999998889999999885433222 2211111222211 0
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHH---hhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANI---TNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWG 158 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~ 158 (302)
++++...+++.+++..+....++++++++|.++....... ......+....++|.|+++ .|.++.+.+...+...+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~ 277 (426)
T PRK12307 199 EEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAF 277 (426)
T ss_pred HHhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH
Confidence 0000000000000000111225678888888765443322 2233334467789999988 69999999998899999
Q ss_pred HHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc-ccchHHHHHHHHHHHHHh-hhhhhhhhhHHhh
Q 022127 159 TMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY-AKSPAVAAVLITIALSLS-SFSQAGYLLNIQE 236 (302)
Q Consensus 159 ~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 236 (302)
+..++.++.|++.||+++|+. . ..+.++..+....... ..+..........+.... ....+.......|
T Consensus 278 ~~~~g~~~~g~l~dr~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (426)
T PRK12307 278 GTVLGNIVWGLCADRIGLKKT--------F-SIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYD 348 (426)
T ss_pred HHHHHHHHHHHHHHHhccHHH--------H-HHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHH
Confidence 999999999999999987632 1 2333333333222222 222222121112221111 1122334556678
Q ss_pred hcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHH
Q 022127 237 IAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAF 277 (302)
Q Consensus 237 ~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~ 277 (302)
..| ++++++.|+.+...++++.++|.+.|++.|+.| +...
T Consensus 349 ~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g-~~~~ 389 (426)
T PRK12307 349 YFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMG-LGAA 389 (426)
T ss_pred hCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHccc-HHHH
Confidence 888 789999999999999999999999999999886 5443
No 49
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.92 E-value=8.6e-23 Score=179.65 Aligned_cols=283 Identities=12% Similarity=0.094 Sum_probs=191.6
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhc-------------CCchHHHHHHHHHHHHHHHHHh
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-------------GISGPFILFSSLGLLWLSTWTS 68 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-------------gwr~~f~~~~~~~~~~~~~~~~ 68 (302)
|...+++.|++|+++|++.+++...+..+|.++++.++..+...+ +||+.+++.++..++. ++..+
T Consensus 274 p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~-ll~~~ 352 (742)
T TIGR01299 274 PIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFA-IGALT 352 (742)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHH-HHHHH
Confidence 667889999999999999999999999999999999887776543 5889888876655544 45556
Q ss_pred hhcCCCCC---CCCCCh------------------HHHH----HHHhc-Ccc-----cccCCC----------------C
Q 022127 69 KVTNDPCN---SPFVSK------------------SELR----LIQAG-KSD-----SVKKRN----------------P 101 (302)
Q Consensus 69 ~~~~~p~~---~~~~~~------------------~~~~----~~~~~-~~~-----~~~~~~----------------~ 101 (302)
++||+|+. +.+.++ .++. ..+.. ..+ ++++.. .
T Consensus 353 ~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (742)
T TIGR01299 353 FMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIW 432 (742)
T ss_pred HcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHH
Confidence 68999862 111000 0000 00000 000 000000 0
Q ss_pred cchHHhhcCc---cHHHHHHHHHhhhHHHHHHHhhhhHHHHHh----h-----------------ccch-----------
Q 022127 102 PSLRHLLSKL---PSWTVIIANITNNWGYFVLLSWMPIYFNTV----F-----------------NVNL----------- 146 (302)
Q Consensus 102 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----------------g~s~----------- 146 (302)
.+++++++.+ +.+.+.+.+++..++++++..|+|.++++. + +++.
T Consensus 433 ~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (742)
T TIGR01299 433 GNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYD 512 (742)
T ss_pred HHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccc
Confidence 1244455543 456788888999999999999999886541 0 0000
Q ss_pred --------------------------------------------------------------------------------
Q 022127 147 -------------------------------------------------------------------------------- 146 (302)
Q Consensus 147 -------------------------------------------------------------------------------- 146 (302)
T Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 592 (742)
T TIGR01299 513 NDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDE 592 (742)
T ss_pred cchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccch
Confidence
Q ss_pred --hhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhh
Q 022127 147 --KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSS 224 (302)
Q Consensus 147 --~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (302)
........+..++.+++.++.|+++||+|||+. +..+.++.+++.+++...++....++..++.+++.+
T Consensus 593 ~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~---------l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~ 663 (742)
T TIGR01299 593 GAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRM---------LAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSI 663 (742)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH---------HHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 011233456678889999999999999997632 245566666666555555554444444455555555
Q ss_pred hhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhc
Q 022127 225 FSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 225 ~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
...+....++.|++| +.|++++|+.+...++|++++|.+.+.+.+. + ...+|++.+++.+++.++.++++
T Consensus 664 ~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~-~~~pf~i~a~~lll~~ll~~~LP 734 (742)
T TIGR01299 664 AAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-T-KAAPILFASAALACGGLLALKLP 734 (742)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-h-hHHHHHHHHHHHHHHHHHHHhCC
Confidence 667778888999999 8899999999999999999999999988775 2 56778877777777766665553
No 50
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.92 E-value=7.5e-24 Score=182.10 Aligned_cols=286 Identities=17% Similarity=0.112 Sum_probs=180.6
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHH---HHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCC-
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLT---PIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNS- 77 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~---~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~- 77 (302)
|...+++.|++|+++|++++++.+.+..+|..+++.++ ....+..+||+.|++.++..++. ++..+++||+|+..
T Consensus 146 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~-~~~~~~l~~~~~~~~ 224 (481)
T TIGR00879 146 ALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLL-FLGLFFLPESPRWLV 224 (481)
T ss_pred hHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHH-HHHHhcCCCChHHHH
Confidence 55678899999999999999999999999999999998 66667789999999966555444 34445577776421
Q ss_pred -CCCChHHHHHHHhc---Cccc----------------ccCCCCcchHHhhcC------ccHHHHHHHHHhhhHHHHHHH
Q 022127 78 -PFVSKSELRLIQAG---KSDS----------------VKKRNPPSLRHLLSK------LPSWTVIIANITNNWGYFVLL 131 (302)
Q Consensus 78 -~~~~~~~~~~~~~~---~~~~----------------~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 131 (302)
+...++.++...+. .+++ +.+..+..+++.++. +.++...+..+..........
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (481)
T TIGR00879 225 GKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIM 304 (481)
T ss_pred HcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehH
Confidence 11111111111000 0000 000001113333332 222333333333333334455
Q ss_pred hhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhh-----cc
Q 022127 132 SWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLN-----YA 206 (302)
Q Consensus 132 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 206 (302)
.+.|.+.++ .|++..+.+.......++..++.++.|+++||+++|+.. ..+..+..++...+. ..
T Consensus 305 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 374 (481)
T TIGR00879 305 YYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLL---------LIGAAGMAICLFVLGILGASFV 374 (481)
T ss_pred HHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH---------HHHHHHHHHHHHHHHHHhhccc
Confidence 667776666 799998888888899999999999999999999976422 122333333332222 11
Q ss_pred cc-----hHHHHHHHHHHHHHhhh-hhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHH
Q 022127 207 KS-----PAVAAVLITIALSLSSF-SQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLT 279 (302)
Q Consensus 207 ~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~ 279 (302)
++ .........+...+.+. ..+.......|..| ++|+++.|+.+...+++++++|.+.+.+.++.+ +...|+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~-~~~~f~ 453 (481)
T TIGR00879 375 TGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIG-VGGVFI 453 (481)
T ss_pred CCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ccceeh
Confidence 11 22222222222222332 23444566688888 789999999999999999999999999998876 888888
Q ss_pred HHHHHHHHHHHHHHhhccCc
Q 022127 280 VTAGLYFVTTIFWNLYSTGE 299 (302)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~ 299 (302)
+.+++++++.++.+++.+++
T Consensus 454 ~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 454 FFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred hHHHHHHHHHHHHheecccC
Confidence 88888887777665554433
No 51
>PRK10504 putative transporter; Provisional
Probab=99.92 E-value=1.6e-22 Score=173.48 Aligned_cols=262 Identities=10% Similarity=0.025 Sum_probs=183.0
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|...+++.|++|+++|+++.++.....++|..++|.+++.+.++.|||+.|++......+..+......|+++.+.++.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~ 196 (471)
T PRK10504 117 PVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFD 196 (471)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCC
Confidence 56678889999999999999999999999999999999999999999999999887777666665555555443322222
Q ss_pred hHHHHH-----------HHhcCc------------------------ccccCCCCcchHHhhcCccHHHHHHHHHhhhHH
Q 022127 82 KSELRL-----------IQAGKS------------------------DSVKKRNPPSLRHLLSKLPSWTVIIANITNNWG 126 (302)
Q Consensus 82 ~~~~~~-----------~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (302)
...... .++... +++..+++....+++|||+++......++....
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~ 276 (471)
T PRK10504 197 LSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIG 276 (471)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHHH
Confidence 111000 000000 011111122223588999999888888888777
Q ss_pred HHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcc
Q 022127 127 YFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA 206 (302)
Q Consensus 127 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (302)
......+.|.|+++..|.++.+.++......++..++.++.+++.||+++|+. + ..+..+..+....+...
T Consensus 277 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~--------~-~~~~~~~~~~~~~~~~~ 347 (471)
T PRK10504 277 SGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRV--------L-VATTLGLALVSLLFMLV 347 (471)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH--------H-HHHHHHHHHHHHHHHhc
Confidence 77777889999998789999999999888888888888999999999987632 2 23333333332222221
Q ss_pred ---cchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 022127 207 ---KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 272 (302)
Q Consensus 207 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g 272 (302)
++.+.......+.+.+.+...+.......+..| +++++++|+.++..++|..+|+.+.|.+.+..|
T Consensus 348 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 348 ALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFG 417 (471)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 222222222333334455556666666666666 889999999999999999999999999987654
No 52
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.92 E-value=2.1e-23 Score=176.27 Aligned_cols=265 Identities=15% Similarity=0.113 Sum_probs=178.5
Q ss_pred cchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCChHHHHHHHhcCcc
Q 022127 15 HERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSD 94 (302)
Q Consensus 15 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 94 (302)
+++++.+|......++|..++|.+++.+.+ .+|++.|++.+++.++..++.++..+|++++.+. +++++ +
T Consensus 137 ~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~ 206 (420)
T PRK09528 137 RRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPSTAKV-ANALG--------A 206 (420)
T ss_pred hhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccchhhh-ccchh--------c
Confidence 456778889999999999999999998875 5999999998877776665555544443322110 00000 0
Q ss_pred cccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhh---ccchhhhhHHhhHHHHHHHhhhhhhhccc
Q 022127 95 SVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVF---NVNLKQAAWFSAVPWGTMAVSGYMAGKAS 171 (302)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~s~~~~~~~~~~~~~~~~~~~~~~g~l~ 171 (302)
++++....+.++.+|||+++...+..+...........+.|.|+.+.+ +.+..+.+...+...+...++.+..|++.
T Consensus 207 ~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~ 286 (420)
T PRK09528 207 NASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFII 286 (420)
T ss_pred ccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011111234556888998877666555555555555567788876643 45666778888888899999999999999
Q ss_pred chhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHH-H
Q 022127 172 DSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGI-A 249 (302)
Q Consensus 172 dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~-~ 249 (302)
||+++|+.. ..+.++..+........++++.......+.+...+...........+..| +.+++..+. .
T Consensus 287 dr~g~~~~~---------~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 357 (420)
T PRK09528 287 NRIGAKNAL---------LLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGF 357 (420)
T ss_pred HHhCcchhh---------HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehH
Confidence 999987432 23444444455555556666554444444444444444444556666666 778877665 6
Q ss_pred HHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhccCc
Q 022127 250 NSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGE 299 (302)
Q Consensus 250 ~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (302)
+....+|.+++|.+.|++.|..| |+..|...+++.++..++.....+++
T Consensus 358 ~~~~~lg~~ig~~~~G~l~~~~G-~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 358 QFAKQLGAVFLSTLAGNLYDSIG-FQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC-chHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 77888999999999999999887 99999988888777666655554443
No 53
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.92 E-value=7.3e-23 Score=176.58 Aligned_cols=286 Identities=14% Similarity=0.106 Sum_probs=174.2
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHh-----------------------hcCCchHHHHHHHH
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS-----------------------TIGISGPFILFSSL 58 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-----------------------~~gwr~~f~~~~~~ 58 (302)
|....+++|++|+++|++++++.+....+|..+++.++..+.. .++||+.|.+.+++
T Consensus 134 ~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip 213 (502)
T TIGR00887 134 PLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVP 213 (502)
T ss_pred HHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHH
Confidence 6678999999999999999999999999999999988876542 24799999887766
Q ss_pred HHHHHHHHHhhhcCCCCC---CCCCChHHHHHHHh----cCc---cc----c--cCCCCcchHHhhcC---ccH----HH
Q 022127 59 GLLWLSTWTSKVTNDPCN---SPFVSKSELRLIQA----GKS---DS----V--KKRNPPSLRHLLSK---LPS----WT 115 (302)
Q Consensus 59 ~~~~~~~~~~~~~~~p~~---~~~~~~~~~~~~~~----~~~---~~----~--~~~~~~~~~~~~~~---~~~----~~ 115 (302)
+++.. +..+++||+|+- +++.+++.++...+ +.+ ++ + ++..+.++++++++ ++. +.
T Consensus 214 ~~i~~-~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 292 (502)
T TIGR00887 214 ALLAL-YFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLG 292 (502)
T ss_pred HHHHH-HHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHH
Confidence 65544 445668999872 22221111111110 000 00 0 01112357777753 222 12
Q ss_pred HHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhH------------HhhHHHHHHHhhhhhhhcccchhhccCCchhH
Q 022127 116 VIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAW------------FSAVPWGTMAVSGYMAGKASDSLIKAGYSLTL 183 (302)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~ 183 (302)
.....+......++...+.|.++++ .|++..+.+. ......++.+++.++.++++||+|||+..
T Consensus 293 ~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l--- 368 (502)
T TIGR00887 293 TAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQ--- 368 (502)
T ss_pred HHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHH---
Confidence 2233444455666777888999976 7876543221 12334456677888999999999987432
Q ss_pred HHHHHHHHhhhhhHHHHHHhhcc--c-chHHHHHHHHHHHHHh-hhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHH
Q 022127 184 VRKIMQSIGFIGPGVSLLCLNYA--K-SPAVAAVLITIALSLS-SFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAI 258 (302)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~ 258 (302)
..+..+..++...+... . +.........+...+. ....+..+....|.+| +.|+++.|+.+...+++++
T Consensus 369 ------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~ 442 (502)
T TIGR00887 369 ------LMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAI 442 (502)
T ss_pred ------HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHH
Confidence 12333323222222211 1 1111112222222222 2233455667789998 8899999999999999999
Q ss_pred HHHHHhhhhhcccc---------chhHHHHHHHHHHHHHHHHHHhhccCc
Q 022127 259 ISTIGTGYFVQWLG---------SFQAFLTVTAGLYFVTTIFWNLYSTGE 299 (302)
Q Consensus 259 i~~~i~g~l~~~~g---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (302)
++|.+.+.+.|..+ ++...+.+.+++.+++.+..+ +.+++
T Consensus 443 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~-~lpEt 491 (502)
T TIGR00887 443 IGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTL-LIPET 491 (502)
T ss_pred HHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHhe-EeccC
Confidence 99999999988431 245677777777777665543 33443
No 54
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.92 E-value=2.1e-22 Score=168.03 Aligned_cols=260 Identities=12% Similarity=0.055 Sum_probs=184.7
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|+..+++.++ +++|+++++......++|..+||++++++.+++|||..|++.++..++.. +.....||++++. +
T Consensus 113 ~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~~~~~~---~ 186 (382)
T PRK11128 113 PLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASML-LGQLLRPTIMPQG---E 186 (382)
T ss_pred cHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH-HHHHccCCCCCcc---c
Confidence 4555666666 45678888999999999999999999999999999999998776444433 3333334322111 0
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMA 161 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ 161 (302)
++++ .++...++++++|+|+++...+..++..........+.|.|+++ .|.++.+.|...+...+...
T Consensus 187 -~~~~----------~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~ 254 (382)
T PRK11128 187 -SRQQ----------ESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEV 254 (382)
T ss_pred -cccc----------cccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHH
Confidence 0000 00112367899999999988887777777777778888999977 89999999999998888899
Q ss_pred hhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhccch
Q 022127 162 VSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAPDC 241 (302)
Q Consensus 162 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 241 (302)
+..+..+++.||+++|+ . +..+.....+........++.+.......+.+...+...+.......+..+++
T Consensus 255 ~~~~~~g~l~~r~~~~~--------~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~ 325 (382)
T PRK11128 255 LIFAFSNRLFRRWSARD--------L-LLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAARPGSE 325 (382)
T ss_pred HHHHHHHHHHHHCCHHH--------H-HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHhh
Confidence 99999999999998652 2 23455555555555555666665555555556656666666666666766677
Q ss_pred hhhHHHHHHHH-HHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHH
Q 022127 242 AGFLHGIANSA-GTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTI 290 (302)
Q Consensus 242 ~~~~~g~~~~~-~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 290 (302)
+++..+..+.. ...|..++|.+.|.+.|+.| + ..++..+++.+++.+
T Consensus 326 ~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g-~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 326 VIRLQALYSALAMGGSIAIMTVLSGFLYQHLG-A-GVFWVMALVALPALF 373 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHHHH
Confidence 78888888744 45677899999999999987 4 456666655554433
No 55
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.92 E-value=2.6e-22 Score=168.66 Aligned_cols=260 Identities=15% Similarity=0.103 Sum_probs=175.6
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|+..+++.|++|+|+|++++++...+..+|..+++.+++.+.+.+|||+.+++..++.++.... .++.|++++..
T Consensus 131 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~- 205 (399)
T PRK05122 131 TGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLL----ARPRPAVPPVK- 205 (399)
T ss_pred chHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH----HhcCCCCCCCC-
Confidence 5566778899999999999999999999999999999999999999999988766554433222 22222211110
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMA 161 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ 161 (302)
++ +.++++.++ +.+.......+..........+.|.|+++ .|.+ +.+...+...++..
T Consensus 206 -~~----------------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~ 263 (399)
T PRK05122 206 -GE----------------RLPFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFV 263 (399)
T ss_pred -cc----------------chhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHH
Confidence 00 011223332 22222233333444555666788888876 5653 45666677788889
Q ss_pred hhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-c
Q 022127 162 VSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-D 240 (302)
Q Consensus 162 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~ 240 (302)
++.+..|++.||+++|+. . ..+..+..++.......++.+.......+.+++.+...+.......+..| +
T Consensus 264 ~~~~~~g~l~~r~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 334 (399)
T PRK05122 264 GARLLFGNLINRLGGLRV--------A-IVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQ 334 (399)
T ss_pred HHHHHHHHHHHHhccHHH--------H-HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHH
Confidence 999999999999986532 1 23334444444444444555444444444445555555555555556666 8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhccC
Q 022127 241 CAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTG 298 (302)
Q Consensus 241 ~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (302)
+++++.|+.+...++|..++|.+.|.+.|+.| ++..+.+.+++.+++.+....+.++
T Consensus 335 ~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 335 NRGAALGAYSVFLDLSLGITGPLAGLVASWFG-YPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHhccc
Confidence 89999999999999999999999999999886 9999999888888877666555443
No 56
>PRK12382 putative transporter; Provisional
Probab=99.92 E-value=2.8e-22 Score=168.08 Aligned_cols=259 Identities=15% Similarity=0.092 Sum_probs=172.5
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|+..+++.|++|+|+|++++++.+.+.+.|..++|++++.+.+..|||+.+.+..+..++... ..++.|+++++.+
T Consensus 131 ~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 206 (392)
T PRK12382 131 TGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWA----FNGTVRKVPAHAG 206 (392)
T ss_pred HHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH----HHHhccCCCCCcc
Confidence 455678889999999999999999999999999999999999999999877765444333221 1222222111000
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMA 161 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ 161 (302)
+ +.+.++..+ .++...+..++..........+.|.|+++ .|.+. .+.......++.+
T Consensus 207 --~----------------~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~ 263 (392)
T PRK12382 207 --E----------------RPSLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFV 263 (392)
T ss_pred --c----------------CchHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHH
Confidence 0 001122221 11221222223334455566778888877 56553 4555666777888
Q ss_pred hhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-c
Q 022127 162 VSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-D 240 (302)
Q Consensus 162 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~ 240 (302)
++++..|++.||+++|+... .+..+..+........++.+.......+.+.+.+...+.......+..| +
T Consensus 264 ~~~~~~g~l~~r~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~ 334 (392)
T PRK12382 264 LMRVLFGWMPDRFGGVKVAI---------VSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQ 334 (392)
T ss_pred HHHHHHHHHHHhcCCCeehH---------HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHH
Confidence 99999999999999875431 2333333344344444554444444444445455555555566666665 8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhcc
Q 022127 241 CAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYST 297 (302)
Q Consensus 241 ~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (302)
+||++.|+.+...++|..++|.+.|.+.|+.| |+..|.+.+++.+++.++.+...+
T Consensus 335 ~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 390 (392)
T PRK12382 335 VRGTALGGYAAFQDIAYGVSGPLAGMLATSFG-YPSVFLAGAISAVLGIIVTILSFR 390 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999887 999999999888888776665544
No 57
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.92 E-value=6.8e-23 Score=176.26 Aligned_cols=286 Identities=14% Similarity=0.099 Sum_probs=170.4
Q ss_pred CchhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHH--------hhcCCchHHHHHHHHHHHHHHHHHhhhcC
Q 022127 1 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML--------STIGISGPFILFSSLGLLWLSTWTSKVTN 72 (302)
Q Consensus 1 ~p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 72 (302)
+|...++++|++|+++|++++++.+.+..+|..+++.+++.+. +.+|||+.|++.+++.++..+ ..+++||
T Consensus 138 ~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~-~~~~l~~ 216 (479)
T PRK10077 138 SMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLM-LLYFVPE 216 (479)
T ss_pred hhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHH-HHHcCCC
Confidence 3667889999999999999999999999999999988776554 356999999998877777554 4556888
Q ss_pred CCCCCCCC-ChHHHHH-HHhcCcccccCCCCcchHHhhc-----CccHH-----HH----HHHHHhhhHHHHHHHhhhhH
Q 022127 73 DPCNSPFV-SKSELRL-IQAGKSDSVKKRNPPSLRHLLS-----KLPSW-----TV----IIANITNNWGYFVLLSWMPI 136 (302)
Q Consensus 73 ~p~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-----~~----~~~~~~~~~~~~~~~~~~~~ 136 (302)
+|+..... ++++.+. .++....++.++...+.++..+ .+..+ .. ....+......+....+.|.
T Consensus 217 s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 296 (479)
T PRK10077 217 TPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPE 296 (479)
T ss_pred CcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHH
Confidence 87531111 1111111 1110000000000001111111 01110 00 11111112223334456677
Q ss_pred HHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc---ccch-HHH
Q 022127 137 YFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY---AKSP-AVA 212 (302)
Q Consensus 137 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~ 212 (302)
+.++ .|.+...........++...++.++.++++||++||+.. ..+..+..++...+.. .+.. ...
T Consensus 297 i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~---------i~~~~~~~v~~~~l~~~~~~~~~~~~~ 366 (479)
T PRK10077 297 IFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQ---------IIGALGMAIGMFSLGTAFYTQAPGIVA 366 (479)
T ss_pred HHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHH---------HHhHHHHHHHHHHHHHHHhcCcccHHH
Confidence 7666 788877777777788889999999999999999976322 2333333333333221 1111 112
Q ss_pred HHHHHHHHHHhhh-hhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhh------ccccchhHHHHHHHHH
Q 022127 213 AVLITIALSLSSF-SQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFV------QWLGSFQAFLTVTAGL 284 (302)
Q Consensus 213 ~~~~~~~~~~~~~-~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~------~~~g~~~~~~~~~~~~ 284 (302)
.....+...+.+. ..+..+....|..| ++|+++.|+.+...++++.+++.+.+.+. |..+ +...|++.++.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~ 445 (479)
T PRK10077 367 LLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFH-NGFSYWIYGCM 445 (479)
T ss_pred HHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhcc-CccHHHHHHHH
Confidence 2222222222222 23556788889888 88999999999999999999977776544 4554 56777777777
Q ss_pred HHHHHHHHHhhccC
Q 022127 285 YFVTTIFWNLYSTG 298 (302)
Q Consensus 285 ~~~~~~~~~~~~~~ 298 (302)
.+++.++.+++.++
T Consensus 446 ~~~~~~~~~~~~~e 459 (479)
T PRK10077 446 GVLAALFMWKFVPE 459 (479)
T ss_pred HHHHHHHHHhcccc
Confidence 66666665555443
No 58
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.91 E-value=1.5e-22 Score=190.64 Aligned_cols=269 Identities=14% Similarity=0.067 Sum_probs=192.9
Q ss_pred CchhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCC
Q 022127 1 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFV 80 (302)
Q Consensus 1 ~p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (302)
.|+..+++.|++|+++|++++|+.+++.++|.++||++++++.+..+|++.|....+..++ .++..+.+|+++++.+..
T Consensus 126 ~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 204 (1140)
T PRK06814 126 GPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVL-GWLASLFIPKTGNAAPDL 204 (1140)
T ss_pred chHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH-HHHHHhhCCCCCCCCCCC
Confidence 4788999999999999999999999999999999999999999999999999554444443 344444466554322211
Q ss_pred ChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHH
Q 022127 81 SKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTM 160 (302)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~ 160 (302)
+.+. ...++ ....++.+.++|.++...+..+..+........++|.|+++.+|.++.+.+++.+...++.
T Consensus 205 ~~~~-~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~ 274 (1140)
T PRK06814 205 KIDR-NIIRS---------TITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGV 274 (1140)
T ss_pred eecc-chHHH---------HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHH
Confidence 1100 00000 0124678889999999988888888888888899999999989999999999999999999
Q ss_pred HhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc--------------------ccchHHHHHHHHHHH
Q 022127 161 AVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY--------------------AKSPAVAAVLITIAL 220 (302)
Q Consensus 161 ~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~ 220 (302)
+++.+..|++.|+..+++... .+.++.++..+.+.. ..+.+...+...+.+
T Consensus 275 ~ig~~~~g~l~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 345 (1140)
T PRK06814 275 AVGSFLASKLSEGRITLLYVP---------IGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLA 345 (1140)
T ss_pred HHHHHHHHHHhCCceeeeeeh---------HHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHH
Confidence 999999999998876654221 111111111111111 134444444445555
Q ss_pred HHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHH
Q 022127 221 SLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTT 289 (302)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~ 289 (302)
++.+...+...+..++..| +++|+++|+.++..+++..+++.+.|.+.+...++...+.+.+.+.++..
T Consensus 346 ~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 415 (1140)
T PRK06814 346 AAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANLIVA 415 (1140)
T ss_pred HHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 6666666777888888887 88999999999999999999999999998654446666655554444333
No 59
>PRK11043 putative transporter; Provisional
Probab=99.91 E-value=9.2e-22 Score=165.44 Aligned_cols=242 Identities=10% Similarity=0.079 Sum_probs=172.2
Q ss_pred hhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCChH
Q 022127 4 MSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKS 83 (302)
Q Consensus 4 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 83 (302)
..+++.|++|++++++..+.......+|..++|.+++++.++.|||+.|++.+++.++..+..++ .+|++++++ +++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~ 191 (401)
T PRK11043 115 WQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLR-LKPSKKARK--QSQ 191 (401)
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH-cCCCCCccc--cch
Confidence 45678999999999999999999999999999999999999999999999988877776655544 444332211 000
Q ss_pred HHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhh
Q 022127 84 ELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVS 163 (302)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~ 163 (302)
++.++++++|+|+++...+.........+....+.|.++++ .|+++.+.+.......++..++
T Consensus 192 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g 254 (401)
T PRK11043 192 ----------------DALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVG 254 (401)
T ss_pred ----------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHH
Confidence 11246788899988876666666666667777889998877 7999999998888878888899
Q ss_pred hhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc--ccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhccch
Q 022127 164 GYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY--AKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAPDC 241 (302)
Q Consensus 164 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 241 (302)
.+..+++.||+++|+.. +.. .....+.......... .++.........+.+...+...+.......+..|++
T Consensus 255 ~~~~~~l~~r~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (401)
T PRK11043 255 GYGCRAALQKWGGEQLL-----PWL-LVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQA 328 (401)
T ss_pred HHHHHHHHHHcCHHHHH-----HHH-HHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCccc
Confidence 99999999999876321 111 1122222222222211 233333333344444555555666666666667888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 022127 242 AGFLHGIANSAGTLAAIISTIGTGYFVQWL 271 (302)
Q Consensus 242 ~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~ 271 (302)
++++.|+.+.....++..++.+.|.+.|..
T Consensus 329 ~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 358 (401)
T PRK11043 329 TGKAAALQNTLQLGLCFLASLLVSALISTP 358 (401)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 999999999999999999999999998754
No 60
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.91 E-value=7.6e-22 Score=159.11 Aligned_cols=257 Identities=12% Similarity=0.081 Sum_probs=183.8
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhh----------------cCCchHHHHHHHHHHHHHHH
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST----------------IGISGPFILFSSLGLLWLST 65 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~----------------~gwr~~f~~~~~~~~~~~~~ 65 (302)
++++.++++..|+|++++.+++.+...++|..++|.+++.+... .+|+++|++.+.+..+..+.
T Consensus 29 ~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~yl~ia~~~~~~~i~ 108 (310)
T TIGR01272 29 VAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHTPYLLLAGALAVLAII 108 (310)
T ss_pred hhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999988731 47999999777766555544
Q ss_pred HHhhhcCCCCCCCCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHh--hc
Q 022127 66 WTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTV--FN 143 (302)
Q Consensus 66 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g 143 (302)
+.+ . +.|+.+++.++++ .+ + +....++.+++|.++...+..+++.....+...|.+.|+++. +|
T Consensus 109 ~~~-~-~~p~~~~~~~~~~----~~----~----~~~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g 174 (310)
T TIGR01272 109 FAF-L-PLPELQEADVARV----SS----G----DTTQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALG 174 (310)
T ss_pred HHH-c-cCCCCCccccccc----cc----c----cccchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 333 2 2222111111000 00 0 001223567888898888888888878999999999999863 68
Q ss_pred cchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHh
Q 022127 144 VNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLS 223 (302)
Q Consensus 144 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (302)
+++.+.+...+....+.++|+++.+++.||+++|+. + ..+..+..+...+....++... .....+.+++.
T Consensus 175 ~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~--------l-~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~ 244 (310)
T TIGR01272 175 LPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRY--------L-AFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFN 244 (310)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH--------H-HHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHH
Confidence 999999999999999999999999999999987532 2 2333333333333333333222 23444555677
Q ss_pred hhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHH
Q 022127 224 SFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGL 284 (302)
Q Consensus 224 ~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~ 284 (302)
+..+|...+...+..|++.+++.++. ....+|+++.|.+.|.+.|..| .+..+++...+
T Consensus 245 s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g-~~~a~~v~~~~ 303 (310)
T TIGR01272 245 SIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLG-IQLAFALPVPC 303 (310)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHhcc-chHHHHHHHHH
Confidence 77788888888887887777888875 5678999999999999999887 77777644433
No 61
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.91 E-value=1.5e-21 Score=163.55 Aligned_cols=259 Identities=13% Similarity=0.114 Sum_probs=181.6
Q ss_pred hhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCChHH
Q 022127 5 STLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSE 84 (302)
Q Consensus 5 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 84 (302)
.++..|..++++++...+....+..+|..+|+...+++.+++|||..|++.+++.++..+..++..|+++++++ .+++
T Consensus 119 d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~-~~~~- 196 (390)
T TIGR02718 119 DGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAVASPE-APLA- 196 (390)
T ss_pred HHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcCccc-cchh-
Confidence 34566777777788888888888899999999999999999999999999998887766555443333322111 0000
Q ss_pred HHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHH-HHHhh
Q 022127 85 LRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWG-TMAVS 163 (302)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~ 163 (302)
...+.++.+|+|.++......++..........+.+.|++| .|+++++.+........ ...++
T Consensus 197 ---------------~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g 260 (390)
T TIGR02718 197 ---------------RRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLG 260 (390)
T ss_pred ---------------hHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHH
Confidence 11246788999998888888888877788888889999988 79999999998887764 66677
Q ss_pred hhhhhcccchhhccCCchhHHHHHHHHHhhhhh-HHHHHHhh--c---ccchHHHHHHHHHHHHHhhhhhhhhhhHHhhh
Q 022127 164 GYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGP-GVSLLCLN--Y---AKSPAVAAVLITIALSLSSFSQAGYLLNIQEI 237 (302)
Q Consensus 164 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (302)
.++.|++.||+++|+. +. .+.... ........ . .++.........+..+..+...+.......+.
T Consensus 261 ~~~~g~l~~r~g~~~~--------l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 331 (390)
T TIGR02718 261 CGGGAWLVRRAGLWRT--------FI-LGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRF 331 (390)
T ss_pred HHHHHHHHHHhhHHHH--------HH-HHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999997632 21 222222 11111111 1 12222222223333344555555555555444
Q ss_pred -cc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHH
Q 022127 238 -AP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIF 291 (302)
Q Consensus 238 -~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 291 (302)
.| +++++.+++.+...++|..++|.+.|.+.|..| ++..|...+++.+++.+.
T Consensus 332 ~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G-~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 332 AGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFG-YAGGFLSGTVLAVLAILL 386 (390)
T ss_pred hCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHHH
Confidence 45 788999999999999999999999999999887 888888887777666543
No 62
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.91 E-value=6.7e-22 Score=163.19 Aligned_cols=243 Identities=24% Similarity=0.404 Sum_probs=202.4
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|...+++.|++|+|+|++.+++.+...++|..+++.+++.+.+..+||+.+++.+.+.++..+...+ .+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------- 174 (352)
T cd06174 106 PAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLF-LL---------- 174 (352)
T ss_pred HhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-HH----------
Confidence 5677899999999999999999999999999999999999999999999999988877776555443 22
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMA 161 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ 161 (302)
|+++...+..++..........+.|.+.++.+|.+..+.+.......++..
T Consensus 175 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (352)
T cd06174 175 -----------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGI 225 (352)
T ss_pred -----------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 455677777888888888899999999999779999999999999999999
Q ss_pred hhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-c
Q 022127 162 VSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-D 240 (302)
Q Consensus 162 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~ 240 (302)
++.++.+++.||+++|+. ....+..+..++.......++.+.......+.+.+.+...+.......|..| +
T Consensus 226 i~~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 297 (352)
T cd06174 226 LGALLGGLLSDRLGRRRL--------LLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPE 297 (352)
T ss_pred HHHHHHHHHHHHHHhhhH--------HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHH
Confidence 999999999999987630 2235555555666655555555555666666667777777888888899888 8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHH
Q 022127 241 CAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWN 293 (302)
Q Consensus 241 ~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 293 (302)
+|++..|+.+...+++..++|.+.|.+.|..+ ++..+.+.+++.+++.+...
T Consensus 298 ~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~-~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 298 ARGTASGLFNTFGSLGGALGPLLAGLLLDTGG-YGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-cchHHHHHHHHHHHHHHHhe
Confidence 99999999999999999999999999998775 89999998888888776554
No 63
>TIGR00895 2A0115 benzoate transport.
Probab=99.91 E-value=2.4e-22 Score=168.73 Aligned_cols=256 Identities=20% Similarity=0.209 Sum_probs=174.3
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|...+++.|++|+++|++++++...+..+|..+++.+++.+.+..|||+.|++.+++.++..++....+||+++...+.+
T Consensus 124 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (398)
T TIGR00895 124 PNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKR 203 (398)
T ss_pred hhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcC
Confidence 56788999999999999999999999999999999999999999999999999877777666666666777654221111
Q ss_pred hHHH-HHHH---hcC--------ccccc-CC-CCcchHHhhcC---ccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhcc
Q 022127 82 KSEL-RLIQ---AGK--------SDSVK-KR-NPPSLRHLLSK---LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNV 144 (302)
Q Consensus 82 ~~~~-~~~~---~~~--------~~~~~-~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 144 (302)
+++. +..+ .+. .++++ ++ .+...+.++++ +..+...+..++.....+....+.|.+.+ ..|.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~ 282 (398)
T TIGR00895 204 PETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMV-ELGF 282 (398)
T ss_pred HHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCC
Confidence 1111 1000 000 00000 00 11112223333 33444455555666666777788885554 4899
Q ss_pred chhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhh
Q 022127 145 NLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSS 224 (302)
Q Consensus 145 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (302)
++.+.+...+...++..++.++.|++.||+++|+ ....................+.........+.+.+.+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 353 (398)
T TIGR00895 283 SLSLAATGGALFNFGGVIGSIIFGWLADRLGPRV---------TALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVN 353 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH---------HHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998651 1112222222222222223344444445555556666
Q ss_pred hhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhh
Q 022127 225 FSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYF 267 (302)
Q Consensus 225 ~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l 267 (302)
...+...+...|..| ++|+++.|+.+...++|..++|.+.|.+
T Consensus 354 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 354 GGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 667777888888888 8899999999999999999999999976
No 64
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.91 E-value=1e-22 Score=169.14 Aligned_cols=244 Identities=18% Similarity=0.213 Sum_probs=168.1
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHh----------hcCCchHH-HHHHHHHHHHHHHHHhhh
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS----------TIGISGPF-ILFSSLGLLWLSTWTSKV 70 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~----------~~gwr~~f-~~~~~~~~~~~~~~~~~~ 70 (302)
+...+++.|++|+++|++++++.....++|..+++.+++.+.+ +.+||+.| ...+++..+..++.....
T Consensus 109 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 188 (366)
T TIGR00886 109 ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVG 188 (366)
T ss_pred HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhc
Confidence 3457789999999999999999998888888888888877665 24899999 444555555555555556
Q ss_pred cCCCCCCCCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhh
Q 022127 71 TNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAA 150 (302)
Q Consensus 71 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~ 150 (302)
+|+|+++++.++.+ .++.. .+.+++.....++.+++|+++...+..++.....+....+.|.|+++.+|.++.+++
T Consensus 189 ~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 264 (366)
T TIGR00886 189 ADTPPGKPATGKLS---FKGAR-WSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAG 264 (366)
T ss_pred ccCCcccccchhcc---ccccc-ccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHH
Confidence 66664322111100 00000 000111112467788999999888888877777788889999999998999999999
Q ss_pred HHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhccc--chHHHHHHHHHHHHHhhhhhh
Q 022127 151 WFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK--SPAVAAVLITIALSLSSFSQA 228 (302)
Q Consensus 151 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 228 (302)
.+.+...+...++.++.|++.||+++|+. ..............+.....+ +.........+.....+...+
T Consensus 265 ~~~~~~~~~~~~~~~~~g~l~~r~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 337 (366)
T TIGR00886 265 AYASLGGLLGSLARPLGGAISDRLGGARK-------LLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNG 337 (366)
T ss_pred HHHHHHHHHHHHHhhccchHHHhhccchh-------HHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccc
Confidence 99899999999999999999999998732 221222222222222222222 333334444555556666677
Q ss_pred hhhhHHhhhccchhhhHHHHHHHHHHHH
Q 022127 229 GYLLNIQEIAPDCAGFLHGIANSAGTLA 256 (302)
Q Consensus 229 ~~~~~~~~~~p~~~~~~~g~~~~~~~~g 256 (302)
..+....+..|+++|+++|+.+..+++|
T Consensus 338 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 338 STFALVPHIFRRATGAVSGLVGAIGNLG 365 (366)
T ss_pred hhhhcchhhchhhcccHHHHHHHhccCC
Confidence 7788888889999999999999988875
No 65
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.91 E-value=5.9e-22 Score=164.00 Aligned_cols=230 Identities=10% Similarity=0.042 Sum_probs=164.6
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcC--------CchHHHHHHHHHHHHHHHHHhhhcCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG--------ISGPFILFSSLGLLWLSTWTSKVTND 73 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g--------wr~~f~~~~~~~~~~~~~~~~~~~~~ 73 (302)
|+..+++.|++|+|+|+++.++...+.++|.++++.+++.+.++.| ||..|++.++..++..+..++..||+
T Consensus 102 ~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 102 IALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred HHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 4567889999999999999999999999999999999999988888 99999998887766554444445553
Q ss_pred CCCCCCCChHHHHHHHhcCcccccCCCCcchHHhhcCcc---HHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhh
Q 022127 74 PCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLP---SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAA 150 (302)
Q Consensus 74 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~ 150 (302)
++ +++.++++++. .+.++++++++|. ++...+..++.....+....+.|.|+++ +|+++.+.+
T Consensus 182 ~~-~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g 247 (356)
T TIGR00901 182 QE-DASVPKPLTQA------------VLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIA 247 (356)
T ss_pred Cc-ccccchhHHHH------------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHH
Confidence 22 21111111111 0124667778775 7777777777777888888999999998 899999999
Q ss_pred HHhhHHH-HHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcc-----------cchHHHHHHHHH
Q 022127 151 WFSAVPW-GTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA-----------KSPAVAAVLITI 218 (302)
Q Consensus 151 ~~~~~~~-~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 218 (302)
......+ +...++.+++|++.||+|+|+. + ..+.++..+........ ++.+.......+
T Consensus 248 ~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~--------l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 318 (356)
T TIGR00901 248 LVAKINGLLGAILGGLIGGIIMQPLNILYA--------L-LLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITL 318 (356)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhhhhHHHH--------H-HHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHH
Confidence 8877655 5778999999999999997632 1 12223333322222111 223334444455
Q ss_pred HHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHH
Q 022127 219 ALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGT 254 (302)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~ 254 (302)
..+..+...+...+...+..| +++|+..|+.+...+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 319 EAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 566677778888899999888 889999999887765
No 66
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.90 E-value=2.2e-22 Score=170.64 Aligned_cols=286 Identities=15% Similarity=0.178 Sum_probs=222.0
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCC--
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPF-- 79 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~-- 79 (302)
.++..++..|| +|+|+.++|+...+.++|..+-|.+..++.+.+|||+.+++.+.+.+-.++......|..++..+.
T Consensus 154 ~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~ 232 (509)
T KOG2504|consen 154 LPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEE 232 (509)
T ss_pred cchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhh
Confidence 34556777777 467999999999999999999999999999999999999999998877666666655533322111
Q ss_pred --------------------C------Ch----HHHHHHHhcCccccc-CCCCcc---hHHhhcCccHHHHHHHHHhhhH
Q 022127 80 --------------------V------SK----SELRLIQAGKSDSVK-KRNPPS---LRHLLSKLPSWTVIIANITNNW 125 (302)
Q Consensus 80 --------------------~------~~----~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 125 (302)
. .. .+.+..++..++.+. ..+... ..+++++|.++.+.+...+...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~ 312 (509)
T KOG2504|consen 233 KDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYL 312 (509)
T ss_pred hhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHH
Confidence 0 00 000000000000010 111111 2688999999999999999999
Q ss_pred HHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc
Q 022127 126 GYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY 205 (302)
Q Consensus 126 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (302)
++.....++|.|.++ .|++..+++.+.+..++..++++++.|++.|+...+ ++.+..++.+..++.....+.
T Consensus 313 g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~-------~~~~~~~~ll~~gl~~~~~p~ 384 (509)
T KOG2504|consen 313 GFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIR-------ALVLFLLTLLIAGLARLFLPF 384 (509)
T ss_pred HHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccc-------hHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999997 899999999999999999999999999999999854 455556777777777777777
Q ss_pred ccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHH
Q 022127 206 AKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGL 284 (302)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~ 284 (302)
.++.+.......+.++..+.........+.|..+ ++-..+.|+...++.++..+||++.|++.|.+|+|...|+.++..
T Consensus 385 ~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~ 464 (509)
T KOG2504|consen 385 ATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLC 464 (509)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChH
Confidence 7777666666666666666655555667788887 889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhc
Q 022127 285 YFVTTIFWNLYS 296 (302)
Q Consensus 285 ~~~~~~~~~~~~ 296 (302)
.+++...+++..
T Consensus 465 ~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 465 FLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHHHhH
Confidence 999887766554
No 67
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.90 E-value=1.9e-21 Score=165.76 Aligned_cols=271 Identities=14% Similarity=0.135 Sum_probs=204.6
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|+-++++.|..|+++..+++++.+...+++.++||.++|.+...+|-.+.|.+.++..++....... .++++++++.
T Consensus 122 PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~-~~~~~~~~~~-- 198 (524)
T PF05977_consen 122 PAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLR-WKPPPPPSSL-- 198 (524)
T ss_pred HHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cccccccccc--
Confidence 7889999999999999999999999999999999999999999999999999877655443333332 3322221111
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMA 161 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ 161 (302)
++| ...+ +.+..++.+.++|.+.......+............+|.+.++.+|.++...|++.+..+++.+
T Consensus 199 ~~e--~~~~--------~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai 268 (524)
T PF05977_consen 199 PRE--RFFS--------ALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAI 268 (524)
T ss_pred chh--hhhh--------hHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 111 1111 112246666677877766665666565555667778999999999999999999999999999
Q ss_pred hhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-c
Q 022127 162 VSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-D 240 (302)
Q Consensus 162 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~ 240 (302)
+|+++.+++.+|+++++.. ..+.+..++.++.+.+.++.+.....+.+.+.+.........+..++..| +
T Consensus 269 ~Gal~~~~l~~~~~~~~lv---------~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~ 339 (524)
T PF05977_consen 269 LGALLLPRLRRRLSSRRLV---------LLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDW 339 (524)
T ss_pred HHHHHHHHhhcccCcchhh---------HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 9999999998888754321 24555666667777777777776666677777667667777788888888 7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhh
Q 022127 241 CAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 241 ~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
.+|++++++++....+..+|..+.|.+.|..| .+..+.+.++..+++.++....
T Consensus 340 ~~GRv~si~~~~~~g~~~lGsll~G~la~~~g-~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 340 VRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG-VRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999987 7777877777666666555443
No 68
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.90 E-value=1.9e-21 Score=163.05 Aligned_cols=240 Identities=14% Similarity=0.062 Sum_probs=158.0
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..|||+.|++.+++.++..++.....||+++++++.+
T Consensus 110 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 189 (392)
T PRK10473 110 VVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPARAPAA 189 (392)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCCc
Confidence 45677889999999999999999999999999999999998888999999999988887777666666666543221110
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMA 161 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ 161 (302)
++ .....++.++||+++...+...+..........+.|.++++.+|+++.+.+...+...++.+
T Consensus 190 ~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i 253 (392)
T PRK10473 190 SS----------------KPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSM 253 (392)
T ss_pred cc----------------hHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 00 01134567788887766665555555555666777888888889999999999999999999
Q ss_pred hhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-c
Q 022127 162 VSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-D 240 (302)
Q Consensus 162 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~ 240 (302)
++.+..+++.||+++|+. . ..+.....++...+...++.........+...+.+...+ .....+..| +
T Consensus 254 ~~~~~~~~l~~r~g~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~--~~~~~~~~~~~ 322 (392)
T PRK10473 254 TVSFSTPFALGIFKPRTL--------M-LTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFG--VAMSQALGPFS 322 (392)
T ss_pred HHHHHHHHHHHhcCHHHH--------H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH--HHHHHHhccCc
Confidence 999999999999987532 1 233333344443333333332222222222222222222 233344555 3
Q ss_pred h-hhhHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 022127 241 C-AGFLHGIANSAGTLAAIISTIGTGYFVQWLG 272 (302)
Q Consensus 241 ~-~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g 272 (302)
+ .+.+. ....++..+++.+.+++.++.|
T Consensus 323 ~~~g~~~----~~~~~~~~~g~~~~~~l~~~~g 351 (392)
T PRK10473 323 LRAGVAS----STLGIAQVCGSSLWIWLAAVLG 351 (392)
T ss_pred ccccHHH----HHHHHHHHHHHHHHHHHHHHhc
Confidence 3 33444 4445566666777777766665
No 69
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.90 E-value=5e-21 Score=161.06 Aligned_cols=264 Identities=9% Similarity=-0.026 Sum_probs=176.7
Q ss_pred hhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCChH
Q 022127 4 MSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKS 83 (302)
Q Consensus 4 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 83 (302)
..+++.|++|+++|++++++......+|..+||.+++.+.++.|||+.|++.+++.++..+..++.+||+++++++..+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~~~- 203 (413)
T PRK15403 125 GYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAVPFS- 203 (413)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCCC-
Confidence 4567889999999999999999999999999999999999999999999999888877665555557776432211100
Q ss_pred HHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhh
Q 022127 84 ELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVS 163 (302)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~ 163 (302)
.++ ...++++++|||+++...+..++.....+.+..+.|.++++.+|.++.+.++.......+..++
T Consensus 204 ~~~-------------~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~ 270 (413)
T PRK15403 204 AKS-------------VLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVA 270 (413)
T ss_pred hHH-------------HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 000 0124678899999999888888888888888888999999988999999999888778888887
Q ss_pred hhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhccchhh
Q 022127 164 GYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAG 243 (302)
Q Consensus 164 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 243 (302)
+.+.+++.+|..+++.... ...+..++..+...... ...++.........+...+.+...+..........+..+|
T Consensus 271 ~~l~~~~~~~~~~~~~~~~--~~~~~~ig~~l~~~~~~--~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~~~G 346 (413)
T PRK15403 271 NAIVARFVKDPTEPRFIWR--AVPIQLVGLALLIVGNL--LWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLPKG 346 (413)
T ss_pred HHHHHHHhccCCchhHHHH--HHHHHHHHHHHHHHHHH--HccccHHHHHHHHHHHHHHHHHHhHHHHHHHhccCCCCCc
Confidence 7777776544333221100 00111122222111111 1122222223344444445555555554433222234589
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHH
Q 022127 244 FLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFV 287 (302)
Q Consensus 244 ~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~ 287 (302)
++.|+.+.....+...++...+++.++. -...+....++..+
T Consensus 347 ~a~a~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~ 388 (413)
T PRK15403 347 TVSASLNMVILMVMAVSVEIGRWLWFNG--GRLPFHLLAVVAGV 388 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC--CchHHHHHHHHHHH
Confidence 9999999999999999999999988773 34455544444333
No 70
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.90 E-value=8.3e-21 Score=159.27 Aligned_cols=243 Identities=12% Similarity=0.077 Sum_probs=174.5
Q ss_pred hhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCh
Q 022127 3 AMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSK 82 (302)
Q Consensus 3 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 82 (302)
....+..|++++++|+++++..+.+..+|..++|.+++.+.+..|||+.|++.++..++..+...+..||+++++++.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 193 (394)
T PRK11652 116 MARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPADARR-- 193 (394)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccccch--
Confidence 345677889999999999999999999999999999999999899999999988877766655555566654322111
Q ss_pred HHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHh
Q 022127 83 SELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAV 162 (302)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~ 162 (302)
++ . +.++++.+++|+++...+..+........+..+.+.++++.+|.++.+.++.......+..+
T Consensus 194 ~~---~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 258 (394)
T PRK11652 194 TR---V------------LASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFF 258 (394)
T ss_pred hH---H------------HHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 00 0 12467788899888766666655556666667788899888999999999888887888888
Q ss_pred hhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc--ccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhccc
Q 022127 163 SGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY--AKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAPD 240 (302)
Q Consensus 163 ~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 240 (302)
++.+.+++.||.+++ ............+....... ..+.+.......+.+.+.+...+.......+..|+
T Consensus 259 g~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 330 (394)
T PRK11652 259 GAWFAGRPNKRFSTL--------MWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPY 330 (394)
T ss_pred HHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 888888888888632 11111222222222222111 12333344444555555666677777778888888
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 022127 241 CAGFLHGIANSAGTLAAIISTIGTGYFVQW 270 (302)
Q Consensus 241 ~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~ 270 (302)
+++++.++.+...++|+.+++.+.+.+.+.
T Consensus 331 ~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 331 LAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 899999999999999999999999988765
No 71
>PRK10054 putative transporter; Provisional
Probab=99.90 E-value=1.5e-21 Score=163.41 Aligned_cols=263 Identities=14% Similarity=0.077 Sum_probs=179.3
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|...++..|.+|+++|++++++.....++|.+++|.+++.+.+ .+||..|++.+++.++..+...+.+||+++++++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~-- 191 (395)
T PRK10054 115 TVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIAT-- 191 (395)
T ss_pred HHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhcccccccc--
Confidence 4566778899999999999999999999999999999998875 7999999998877776655555545554322111
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHh--hccchhhhhHHhhHHHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTV--FNVNLKQAAWFSAVPWGT 159 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~ 159 (302)
+++ + ..+.++.+|||+++...+..++..........+.+.|..+. .+.+....+.........
T Consensus 192 ~~~-~--------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 256 (395)
T PRK10054 192 ETG-S--------------VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAM 256 (395)
T ss_pred chh-h--------------hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhh
Confidence 000 0 01236678999998888777777766666666777777543 345566667777776666
Q ss_pred HHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcc-cchHHHHHHHHHHHHHhhhhhhhhhhHHhhhc
Q 022127 160 MAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA-KSPAVAAVLITIALSLSSFSQAGYLLNIQEIA 238 (302)
Q Consensus 160 ~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (302)
.....+..|++.||.++|+. ...++.+..++....... ++.+.......+.+.+.....+.....+.+..
T Consensus 257 ~~~~~~~~g~~~~~~~~~~~---------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~ 327 (395)
T PRK10054 257 VVSLQYSVGRRLNAANIRPL---------MTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIA 327 (395)
T ss_pred eeeehhHHHHHHccCCchhH---------HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhC
Confidence 66777788888999876532 123444444444333332 33333333334444444444556666777777
Q ss_pred c-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHH
Q 022127 239 P-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWN 293 (302)
Q Consensus 239 p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 293 (302)
| +.+++..+..+ ...+|..+||.+.|.+.|+.| +...+.+.+.+..+..++..
T Consensus 328 p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 328 PPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLP-PWSLFVILALAIVAAWLLML 381 (395)
T ss_pred CcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcC-hhhHHHHHHHHHHHHHHHHH
Confidence 7 78899888655 677899999999999999986 77777776666666555444
No 72
>TIGR00898 2A0119 cation transport protein.
Probab=99.90 E-value=1.2e-21 Score=169.51 Aligned_cols=275 Identities=14% Similarity=0.056 Sum_probs=176.4
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCC--CC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNS--PF 79 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~--~~ 79 (302)
|...+++.|++|+++|+++.++...+..+|.++++.++..+.+ ||+.|++.+++.++..+.. +++||+|+.. +.
T Consensus 199 ~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~~esp~~l~~~~ 274 (505)
T TIGR00898 199 VQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFVPESPRWLISQG 274 (505)
T ss_pred HHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-HhcCCChHHHHHCC
Confidence 5677889999999999999999999999999999998877653 9999999888877766555 5688887521 11
Q ss_pred CChHHHHHHHh-----c------------CcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhh
Q 022127 80 VSKSELRLIQA-----G------------KSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVF 142 (302)
Q Consensus 80 ~~~~~~~~~~~-----~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (302)
..++..+..++ + .+++++++++.+.++++++|+++...+................+.+..+ .
T Consensus 275 ~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 353 (505)
T TIGR00898 275 RIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGN-L 353 (505)
T ss_pred CHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccc-c
Confidence 11111111000 0 0000111123477889999988776655544433332222222333333 4
Q ss_pred ccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccch--HHHHHHHHHHH
Q 022127 143 NVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSP--AVAAVLITIAL 220 (302)
Q Consensus 143 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 220 (302)
+.+.. ......++..+++.++.+++.||+|||+. ...+.++.+++.+.+...++. +.......+..
T Consensus 354 ~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~---------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 421 (505)
T TIGR00898 354 GGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYT---------MAASLLLAGVALLLLLFVPVDLYFLRTALAVLGK 421 (505)
T ss_pred CCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHH---------HHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Confidence 54433 23334567778888999999999997632 124444444444444333322 33334444455
Q ss_pred HHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhc
Q 022127 221 SLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
++.....+..+.+..|..| +.|+++.|+.+....+|++++|.+.+ +.+ .+ +...+.+.++..+++.++.+++.
T Consensus 422 ~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~~-~~~~~~~~~~~~~~~~~~~~~lp 495 (505)
T TIGR00898 422 FGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE-KW-LFLPLVLFGGLALLAGILTLFLP 495 (505)
T ss_pred HHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-HH-HhhHHHHHHHHHHHHHHHHHcCc
Confidence 5555566777788899998 88999999999999999999999999 433 33 55677777777777666555544
No 73
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.90 E-value=5.2e-22 Score=171.53 Aligned_cols=275 Identities=13% Similarity=0.053 Sum_probs=162.3
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
+...+++.|++|+++|++++++...+.++|..+++.+++.+.++++||+.|++..+ .++..+......||+++.+++.+
T Consensus 127 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~-~~~~~~~~~~~~p~~~~~~~~~~ 205 (496)
T PRK03893 127 GSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGIL-PIIFALWLRKNLPEAEDWKEKHA 205 (496)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH-HHHHHHHHHHhCCCchhhhhhcc
Confidence 45667899999999999999999999999999999999999999999999987433 33333333333444332111000
Q ss_pred hH-HHHHHHhcCcccccCCCCcc--------hHHhh----------------------------c---CccHHHHHHHHH
Q 022127 82 KS-ELRLIQAGKSDSVKKRNPPS--------LRHLL----------------------------S---KLPSWTVIIANI 121 (302)
Q Consensus 82 ~~-~~~~~~~~~~~~~~~~~~~~--------~~~~~----------------------------~---~~~~~~~~~~~~ 121 (302)
++ +.+...+.....+++..... ....+ + .+.........+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (496)
T PRK03893 206 GKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVL 285 (496)
T ss_pred ccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHH
Confidence 00 00000000000000000000 00000 0 000001111111
Q ss_pred hhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHH
Q 022127 122 TNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLL 201 (302)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (302)
......+....++|.|+++.+|+++.+.+.+.+...++..++.++.|+++||+++|+.. ..+..+..+..+
T Consensus 286 ~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~---------~~~~~~~~~~~~ 356 (496)
T PRK03893 286 FAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAY---------VCSLLISQLLII 356 (496)
T ss_pred HHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH---------HHHHHHHHHHHH
Confidence 11111123457899999877999999999999999999999999999999999876321 123222222222
Q ss_pred Hhhcc--cchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHH
Q 022127 202 CLNYA--KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFL 278 (302)
Q Consensus 202 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~ 278 (302)
..... .+.+.......+..+......+.......+..| +++++++|+.+...++|+.++|.+.|.+.|+.| +...+
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g-~~~~~ 435 (496)
T PRK03893 357 PVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLD-LGTAL 435 (496)
T ss_pred HHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCC-hHHHH
Confidence 22222 222222222222222222223445566778777 789999999999999999999999999999987 77776
Q ss_pred HHHHHHHHH
Q 022127 279 TVTAGLYFV 287 (302)
Q Consensus 279 ~~~~~~~~~ 287 (302)
...+....+
T Consensus 436 ~~~~~~~~~ 444 (496)
T PRK03893 436 ASLSFSLTF 444 (496)
T ss_pred HHHHHHHHH
Confidence 555444333
No 74
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.89 E-value=1.5e-21 Score=161.47 Aligned_cols=243 Identities=15% Similarity=0.089 Sum_probs=168.1
Q ss_pred hhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhc--CCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCC
Q 022127 3 AMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI--GISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFV 80 (302)
Q Consensus 3 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (302)
....++.|++| ++|++++++.+.+.++|..+++.+++.+.++. +||+.|...+++.++... ..+|+.+++++..
T Consensus 107 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~---~~~~~~~~~~~~~ 182 (355)
T TIGR00896 107 LLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL---AWIPQVRRRVAAN 182 (355)
T ss_pred cchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH---HHhhhhccccCCC
Confidence 34567788886 68999999999999999999999999888765 399998876665443322 2234332211100
Q ss_pred ChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHH
Q 022127 81 SKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTM 160 (302)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~ 160 (302)
+ +..+...++.+|+|.++...+..++.....+....++|.|+++ .|.|+.+.+...+...++.
T Consensus 183 ~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~ 245 (355)
T TIGR00896 183 Q----------------TTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQ 245 (355)
T ss_pred C----------------CCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHH
Confidence 0 0011235677889998887777777777788888999999987 7999999999999999999
Q ss_pred HhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhh-hcc
Q 022127 161 AVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQE-IAP 239 (302)
Q Consensus 161 ~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p 239 (302)
+++++..|++.||+++|+ +.. ..+..+..++...+...++..... ...+.+.+.+...+.......+ ..+
T Consensus 246 i~~~~~~g~l~dr~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~ 316 (355)
T TIGR00896 246 AASALLIPALARRVKDQR-------GIV-AVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQ 316 (355)
T ss_pred HHHHHhHHHHHhhhccch-------HHH-HHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccC
Confidence 999999999999996542 111 233333333333333333222211 2333444455555555454443 333
Q ss_pred -chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchh
Q 022127 240 -DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQ 275 (302)
Q Consensus 240 -~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~ 275 (302)
+++++..++.+...+++.+++|.+.|.+.|+.|+|.
T Consensus 317 ~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 317 AAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 667899999999999999999999999999988764
No 75
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.89 E-value=4.4e-21 Score=150.15 Aligned_cols=264 Identities=17% Similarity=0.142 Sum_probs=196.5
Q ss_pred hhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhc-CCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCChH
Q 022127 5 STLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-GISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKS 83 (302)
Q Consensus 5 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 83 (302)
.+++.+.||+ +-+..+|+++...++|..+++.+...+.++. |||......+.++++..+.++... .+++ ..+
T Consensus 121 PslIK~~Fpk-~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~---~r~~-~~~-- 193 (395)
T COG2807 121 PSLIKRDFPK-RVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQA---LREQ-AAS-- 193 (395)
T ss_pred hHHHHhhccc-chhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhc---cccc-ccc--
Confidence 4667888875 4699999999999999999999999998887 799999999999988776655421 1110 000
Q ss_pred HHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhh
Q 022127 84 ELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVS 163 (302)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~ 163 (302)
.+.+..+..+++|||.-|.+.+.+.+++..+|....|+|.++.| .|+|++++|.+.+...+.....
T Consensus 194 -------------~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~ 259 (395)
T COG2807 194 -------------IATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPT 259 (395)
T ss_pred -------------cccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHH
Confidence 00112234568999999999999999999999999999999999 7999999999999999999999
Q ss_pred hhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhc--cch
Q 022127 164 GYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIA--PDC 241 (302)
Q Consensus 164 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~ 241 (302)
++....+.+|..+++. .. .....+..++.+.+.+.+....... ..+.+.+.+..++.......+-. |++
T Consensus 260 ~ll~P~la~R~~n~r~-------~~-~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~ 330 (395)
T COG2807 260 ALLIPLLARRSKNQRP-------LV-VLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAI 330 (395)
T ss_pred HHHHHHHHHHhcccch-------HH-HHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHH
Confidence 9999999999665432 22 2333333334433333332111111 24444445555666555555433 477
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhccC
Q 022127 242 AGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTG 298 (302)
Q Consensus 242 ~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (302)
.+.-+|+.+.++++-.+.||.+.|++.|.+|+|+..+.......++..+.-+...|+
T Consensus 331 Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~r~ 387 (395)
T COG2807 331 AAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAGRN 387 (395)
T ss_pred HHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcchh
Confidence 899999999999999999999999999999999999988887777766655555444
No 76
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.89 E-value=1.7e-20 Score=156.65 Aligned_cols=257 Identities=12% Similarity=0.039 Sum_probs=168.4
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|...+.+.|..++++|+++++..+.+.++|..+|+.+++.+.+...|+..+. .+.......... + .+.++++++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~-~-~~~~~~~~~--- 186 (381)
T PRK03633 113 VVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV-TGLVLAAILPLL-F-TRILNQQAE--- 186 (381)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHH-HHHHHHHHHHHH-H-hcccCCCCC---
Confidence 3445667788899999999999999999999999999999876644443333 232222222121 1 222221110
Q ss_pred hHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHH
Q 022127 82 KSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMA 161 (302)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ 161 (302)
+ + +..+.++.+|+|.++......+...........++|.|+++ .|.++.+.+...+...++.+
T Consensus 187 ~-~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~ 249 (381)
T PRK03633 187 N-H---------------DSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGI 249 (381)
T ss_pred C-C---------------CCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHH
Confidence 0 0 01245677888887765554444445555667789999987 69999999999899899999
Q ss_pred hhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-c
Q 022127 162 VSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-D 240 (302)
Q Consensus 162 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~ 240 (302)
++++..|++.||+++|+.. ..+.....++..... ..... .....+.+.......+.......|..| +
T Consensus 250 ~~~~~~g~l~dr~~~~~~l---------~~~~~~~~~~~~~~~--~~~~~-~~~~~l~g~~~~~~~p~~~~~~~~~~~~~ 317 (381)
T PRK03633 250 LGQWPIGRLADRFGRLLVL---------RVQVFVVILGSIAML--SQAAM-APALFILGAAGFTLYPVAMAWACEKVEHH 317 (381)
T ss_pred HHHhhhHHHHHHcCcHHHH---------HHHHHHHHHHHHHHh--hhHHH-HHHHHHHHHHHHhHHHHHHHHHHccCCHH
Confidence 9999999999999876321 123333233222222 11111 112222222233345666666667666 6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHh
Q 022127 241 CAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNL 294 (302)
Q Consensus 241 ~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 294 (302)
+++...+..+...++|++++|.+.|++.|+.| +...|.+.+.+.++..+..+.
T Consensus 318 ~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 318 ELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS-DNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHh
Confidence 77788888888899999999999999999987 888888887777766544433
No 77
>PRK10133 L-fucose transporter; Provisional
Probab=99.89 E-value=1.4e-20 Score=159.16 Aligned_cols=265 Identities=11% Similarity=0.061 Sum_probs=179.5
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHh------------------h--------cCCchHHHHH
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS------------------T--------IGISGPFILF 55 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~------------------~--------~gwr~~f~~~ 55 (302)
++.++++.|+.|+++|.+.+++.+....+|..+++.+++.+.. . .+||++|+..
T Consensus 136 ~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~ 215 (438)
T PRK10133 136 TAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMII 215 (438)
T ss_pred hhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHH
Confidence 4567788888777777778999999999999999999876541 0 2566666543
Q ss_pred HHHHH-HHHHHHHhhhcCCCCCCCCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhh
Q 022127 56 SSLGL-LWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWM 134 (302)
Q Consensus 56 ~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (302)
..+.. +..+......||.+++++ + + +++++...+.++++++|.++...+..++..........|.
T Consensus 216 ~~v~~~~~~~~~~~~~p~~~~~~~---~-~----------~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~ 281 (438)
T PRK10133 216 VAIVLLVALLIMLTKFPALQSDNH---S-D----------AKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYL 281 (438)
T ss_pred HHHHHHHHHHHHHhcCCCCCcccc---c-c----------ccccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 33332 322222222333221110 0 0 0000112246788999998887777777777777778889
Q ss_pred hHHH-HHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHH
Q 022127 135 PIYF-NTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAA 213 (302)
Q Consensus 135 ~~~~-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (302)
+.|+ ++.+|.++.+++.......++..++++..+++.||+++|+. + ..+..+....+......++. ...
T Consensus 282 ~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~--------l-~~~~~~~~~~~~~~~~~~~~-~~~ 351 (438)
T PRK10133 282 IRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKV--------L-AAYALIAMALCLISAFAGGH-VGL 351 (438)
T ss_pred HHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH--------H-HHHHHHHHHHHHHHHHcCCh-HHH
Confidence 9885 56689999999999999999999999999999999997632 2 12232322333322233332 224
Q ss_pred HHHHHHHHHhhhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHH
Q 022127 214 VLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIF 291 (302)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 291 (302)
..+.+.+++.+..+|..++...+..|++.+++.++.. ...+|+.++|.+.|.+.|..|+.+..|++...+.+.....
T Consensus 352 ~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 352 IALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccchhhccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 4455667778888899999888888887888888886 4557899999999999998764677777655555444433
No 78
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.89 E-value=3.6e-21 Score=161.48 Aligned_cols=258 Identities=14% Similarity=0.071 Sum_probs=172.2
Q ss_pred chhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCChHHHHHHHhcCccc
Q 022127 16 ERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDS 95 (302)
Q Consensus 16 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 95 (302)
++++..+......++|.+++|.+++.+.+ .+||..|++.+.+.++..++.+...||+|++++ +++ ..+++
T Consensus 130 ~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~----~~~~~ 199 (396)
T TIGR00882 130 NSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPSSAT-----VAN----ALGAN 199 (396)
T ss_pred hcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhh-----hhc----ccccc
Confidence 34557788888899999999999998764 599999999888888766555544444332110 000 00001
Q ss_pred ccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhh---ccchhhhhHHhhHHHHHHHhhhhhhhcccc
Q 022127 96 VKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVF---NVNLKQAAWFSAVPWGTMAVSGYMAGKASD 172 (302)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 172 (302)
+++++..+.++++|||+++...+..+...........+.|.|+++.+ +.+....+...+...+...++.+..|++.|
T Consensus 200 ~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~ 279 (396)
T TIGR00882 200 ASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIIN 279 (396)
T ss_pred cCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11122335788999999887777666666566666677888888754 455567788888888889999999999999
Q ss_pred hhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHH-HH
Q 022127 173 SLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGI-AN 250 (302)
Q Consensus 173 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~-~~ 250 (302)
|+++|+.. .++..+.++........++.+.......+.+...............+..| +.+++..+. .+
T Consensus 280 r~g~~~~l---------~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~ 350 (396)
T TIGR00882 280 RIGAKNAL---------LIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQ 350 (396)
T ss_pred HhccchhH---------HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHH
Confidence 99987432 24444444444444445555544444333333332222223333455455 566776665 67
Q ss_pred HHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHH
Q 022127 251 SAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWN 293 (302)
Q Consensus 251 ~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 293 (302)
....+|+.++|.+.|++.|..| |+.+|.+.+++.++..+...
T Consensus 351 ~~~~lg~~~~~~l~G~l~~~~G-~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 351 FAKQLAMIFLSTLAGNMYDSIG-FQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHHHHHHHhHHHHHHhcc-cHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999887 99999998888877766543
No 79
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.88 E-value=6.5e-21 Score=180.06 Aligned_cols=269 Identities=19% Similarity=0.123 Sum_probs=185.2
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhh--------c-CCchHHHHHHHHHHHHHHHHHhhhcC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST--------I-GISGPFILFSSLGLLWLSTWTSKVTN 72 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~--------~-gwr~~f~~~~~~~~~~~~~~~~~~~~ 72 (302)
|+..+++.|++|+++|++++|+...+.++|.++|+.+++++.+. + +|++.+.+..+...+..++..+.+||
T Consensus 122 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (1146)
T PRK08633 122 PAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPK 201 (1146)
T ss_pred hHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcC
Confidence 66788999999999999999999999999999999999999876 2 34444444444333333344444666
Q ss_pred CCCCCCCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchh-hhhH
Q 022127 73 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLK-QAAW 151 (302)
Q Consensus 73 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~-~~~~ 151 (302)
.|+..+...+.+.. ...+.....++.++++|.++...+..++..........++|.|+++.+|.+.. +.++
T Consensus 202 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~ 273 (1146)
T PRK08633 202 VPAAAPEVFDKKKY--------LFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQY 273 (1146)
T ss_pred CCCCCccccccccc--------ccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHH
Confidence 65432211100000 00000122466788889888887777777777777888999999998999998 8999
Q ss_pred HhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhh
Q 022127 152 FSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYL 231 (302)
Q Consensus 152 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (302)
+.+...++.+++.++.|++.||.++++.. .++.++.+++.+.+....+.+...+...+.+++.+...+...
T Consensus 274 ~~~~~~ig~~~g~~~~g~l~~r~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 344 (1146)
T PRK08633 274 LLAASAIGIGIGSLLAGRLSGRHIELGLV---------PLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLN 344 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCceEccch---------hHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHH
Confidence 99999999999999999999999876432 133333344444444444554444555555555666666777
Q ss_pred hHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHH
Q 022127 232 LNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFV 287 (302)
Q Consensus 232 ~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~ 287 (302)
+...+..| +.||+++|+.+.+.+++..+++.+.+.+.....++...+.+.+.+.++
T Consensus 345 ~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 345 ALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 88888777 889999999999999999888887776654211244455554444433
No 80
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.88 E-value=1e-20 Score=160.96 Aligned_cols=245 Identities=13% Similarity=0.100 Sum_probs=170.7
Q ss_pred hhhhhccc-CccchhhHHHHHhhhhhhHHHHHHHHHHHHHh-------hcCCchHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 022127 5 STLTSRWF-PSHERASAIGICMGGFHLGNVVGLLLTPIMLS-------TIGISGPFILFSSLGLLWLSTWTSKVTNDPCN 76 (302)
Q Consensus 5 ~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~ 76 (302)
.++..|.. +++||++..++.+.+..+|..+++.+.+.+.. ..+||+.+.+.++++++..++.++..||++++
T Consensus 121 ~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~ 200 (437)
T TIGR00792 121 WSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSE 200 (437)
T ss_pred hhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCC
Confidence 45667776 46899999999999999998888777666653 45899999999988888777766667765432
Q ss_pred CCCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHH
Q 022127 77 SPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVP 156 (302)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~ 156 (302)
.+.. ++ ++.+....++++++||+++...+..++..........+.+.|.++..+ ++.+.+.+....
T Consensus 201 ~~~~-~~------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 266 (437)
T TIGR00792 201 IPKN-IE------------KKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIA 266 (437)
T ss_pred CCcc-cc------------cCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHH
Confidence 1110 00 000112246788899999988888888777777766666666666555 556667777777
Q ss_pred HHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcc-cchHHHHHHHHHHHHHhhhhhhhhhhHHh
Q 022127 157 WGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA-KSPAVAAVLITIALSLSSFSQAGYLLNIQ 235 (302)
Q Consensus 157 ~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (302)
.++.+++.++.++++||+|+|+. . ..+..+..++....... ++.+.......+.+++.+...+..++...
T Consensus 267 ~i~~ii~~~~~~~l~~r~g~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 337 (437)
T TIGR00792 267 IVAGLIGVLLFPRLVKKFGRKIL--------F-AGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVA 337 (437)
T ss_pred HHHHHHHHHHHHHHHHHhCcHHH--------H-HHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999997632 1 23333333333333332 23334444445555555666666677766
Q ss_pred hhcc--------chhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 022127 236 EIAP--------DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 272 (302)
Q Consensus 236 ~~~p--------~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g 272 (302)
|..+ +++|+..|+.+....++..+++.+.|.+.|..|
T Consensus 338 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 338 DTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred hhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 6542 457999999999999999999999999988654
No 81
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.87 E-value=9.5e-20 Score=151.44 Aligned_cols=284 Identities=13% Similarity=0.066 Sum_probs=192.4
Q ss_pred hhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHH-HH-HhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCC----C
Q 022127 4 MSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTP-IM-LSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCN----S 77 (302)
Q Consensus 4 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~-~l-~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~----~ 77 (302)
..-++.|..|++.||........+..+|..++..++. .+ -+...|++.+....+++++..+.. .++||+|+. +
T Consensus 137 ~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l-~~~PESPk~Ll~~k 215 (485)
T KOG0569|consen 137 VPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALL-PFLPESPKYLLIKK 215 (485)
T ss_pred HHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHH-hcCCCCcchHHHHc
Confidence 4567899999999999999999999999999977763 33 345579999999888777765544 458999972 1
Q ss_pred CCCChHH---------------HHHHHhcCc-ccccCCCCcchHHhhcCccHHH-----HHHHHHhhhHHHHHHHhhhhH
Q 022127 78 PFVSKSE---------------LRLIQAGKS-DSVKKRNPPSLRHLLSKLPSWT-----VIIANITNNWGYFVLLSWMPI 136 (302)
Q Consensus 78 ~~~~~~~---------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 136 (302)
++.++.+ .+...++.+ ++..+++..+++++++||.... +.+....+..+.+....|...
T Consensus 216 ~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~ 295 (485)
T KOG0569|consen 216 GDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTS 295 (485)
T ss_pred CCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHH
Confidence 1111111 011111111 1122235667899999865432 333333444455556677777
Q ss_pred HHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc----cc-c-hH
Q 022127 137 YFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY----AK-S-PA 210 (302)
Q Consensus 137 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~-~~ 210 (302)
++++ .|++..++.+.....+..+.+.++++.++.||.|||.... .+..++.+..+.+.. .. . .+
T Consensus 296 i~~~-aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll---------~~~~~~~~~~~~~~~~~~l~~~~~~~ 365 (485)
T KOG0569|consen 296 IFKT-AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLL---------ISLSLMAVALLLMSIALFLSNSFGSW 365 (485)
T ss_pred HHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHH---------HHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 7777 8999999999999999999999999999999999875432 222222222222111 11 1 12
Q ss_pred H---HHHHHHHHHHHhhhh-hhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHH
Q 022127 211 V---AAVLITIALSLSSFS-QAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLY 285 (302)
Q Consensus 211 ~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~ 285 (302)
. .+...++.....+.. .|..+-..+|++| +.|+.+.++......+..++-......+.+..|. ..|....+.+
T Consensus 366 ~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~--~~filF~i~~ 443 (485)
T KOG0569|consen 366 LSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP--YVFILFVIPL 443 (485)
T ss_pred HHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hhhHHHHHHH
Confidence 1 233334444444444 3445777899998 8899999999999999999999999999998885 6777777777
Q ss_pred HHHHHHHHhhccCcc
Q 022127 286 FVTTIFWNLYSTGER 300 (302)
Q Consensus 286 ~~~~~~~~~~~~~~~ 300 (302)
++..+..+...+|+|
T Consensus 444 ~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 444 AIFLIYLYRYLPETK 458 (485)
T ss_pred HHHHHHHHHhCcccC
Confidence 777777777777665
No 82
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.86 E-value=6.5e-19 Score=148.84 Aligned_cols=278 Identities=15% Similarity=0.116 Sum_probs=211.4
Q ss_pred hhhhhcccCccch--------------------------hhHHHHHhhhhhhHHHHHHHHHHHHHhh--------cCCch
Q 022127 5 STLTSRWFPSHER--------------------------ASAIGICMGGFHLGNVVGLLLTPIMLST--------IGISG 50 (302)
Q Consensus 5 ~~~i~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~~~~~~~~l~~~--------~gwr~ 50 (302)
.+++.|..+++++ ++..+.-.....+|..+...+.-.+... .+-|.
T Consensus 148 na~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~ 227 (477)
T PF11700_consen 148 NAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRV 227 (477)
T ss_pred HHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhH
Confidence 4677788887777 9999999999999999888877665432 23588
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCCCCCChHH--HHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHH
Q 022127 51 PFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSE--LRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYF 128 (302)
Q Consensus 51 ~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (302)
.+.+.++--++..+..++.+||.|+.++..+..+ +...++ -....+++.|+|+....++.+++..-+..
T Consensus 228 ~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~---------l~~t~k~~~~~~~~~~fLia~~l~~dg~~ 298 (477)
T PF11700_consen 228 AFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKR---------LWRTFKEIRKLRQLFLFLIAYFLYSDGVN 298 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHH---------HHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 8888888888888888888888876322211111 111111 12246777788999999999999999999
Q ss_pred HHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhh-HHHHHHhh---
Q 022127 129 VLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGP-GVSLLCLN--- 204 (302)
Q Consensus 129 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--- 204 (302)
++......|.++++|++..+...+.....+.+++|+++.|++.||+|.|.. +.+ ..+.... .+....+.
T Consensus 299 ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~------~~l-~~~l~~~~~i~~~g~~G~~ 371 (477)
T PF11700_consen 299 TIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK------RTL-LISLILWIIIPLYGLFGFW 371 (477)
T ss_pred HHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh------HHH-HHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999998721 111 1222111 22222111
Q ss_pred ----cccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHH
Q 022127 205 ----YAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLT 279 (302)
Q Consensus 205 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~ 279 (302)
..++.+...+...+.+.+.+...+...++..++.| ++.+..+|++.......+.+||.+.|.+.|.+|+.+..+.
T Consensus 372 ~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~ 451 (477)
T PF11700_consen 372 PSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFL 451 (477)
T ss_pred hcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH
Confidence 13455556666666777777778888888999888 7889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccC
Q 022127 280 VTAGLYFVTTIFWNLYSTG 298 (302)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~ 298 (302)
...++.+++.++......+
T Consensus 452 ~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 452 FLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred HHHHHHHHHHHHHhhccch
Confidence 9999999988877655443
No 83
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.86 E-value=2.6e-19 Score=150.81 Aligned_cols=246 Identities=8% Similarity=0.019 Sum_probs=162.8
Q ss_pred hhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCChHHHHHHHhcCcccccCCCCcchHHhh
Q 022127 29 HLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLL 108 (302)
Q Consensus 29 ~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (302)
.+|.++++.+++.+.....|+ +|++.+++.++..+. .+.+||+|+++++.+.+.++ ..+.+.++++
T Consensus 140 ~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~------------~~~~~~~~~~ 205 (418)
T TIGR00889 140 TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVF-ALTLPDIPVAKSTAKMSIKV------------MLGLDAFILF 205 (418)
T ss_pred hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHH-HhcCCCCCCCccccccCHHH------------HhhhhHHHHh
Confidence 478888898888774333454 455666666655543 44567765322211110000 0112356788
Q ss_pred cCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccch--------hhhhHHhhHHHHHHHhhhhhhhcccchhhccCCc
Q 022127 109 SKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNL--------KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYS 180 (302)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~--------~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~ 180 (302)
|+|+++...+..++..........+.|.|+++ .|.++ ...+...+...+..+++.+..|++.||+|+|+.
T Consensus 206 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~- 283 (418)
T TIGR00889 206 KNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKV- 283 (418)
T ss_pred cCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH-
Confidence 99998888887777766666666788888877 55443 566888888899999999999999999997532
Q ss_pred hhHHHHHHHHHhhhhhHHHHHHhhccc-ch---HHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHH-HHHH
Q 022127 181 LTLVRKIMQSIGFIGPGVSLLCLNYAK-SP---AVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIAN-SAGT 254 (302)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~-~~~~ 254 (302)
+..+.+...+......... +. +.......+.+...+...+.....+.|..| ++|+++.|+.+ ....
T Consensus 284 --------l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~ 355 (418)
T TIGR00889 284 --------MLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNG 355 (418)
T ss_pred --------HHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHh
Confidence 2344444444443333322 11 222333344444445555666677788888 88999999997 5678
Q ss_pred HHHHHHHHHhhhhhcccc-----chhHHHHHHHHHHHHHHHHHHhhccC
Q 022127 255 LAAIISTIGTGYFVQWLG-----SFQAFLTVTAGLYFVTTIFWNLYSTG 298 (302)
Q Consensus 255 ~g~~i~~~i~g~l~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (302)
+|.++||.+.|.+.|+.| +|+..|.+.+++.+++.++..++.++
T Consensus 356 lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~ 404 (418)
T TIGR00889 356 FGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKY 404 (418)
T ss_pred hHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999865 38889988888877777666655544
No 84
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.85 E-value=5.7e-19 Score=148.17 Aligned_cols=259 Identities=10% Similarity=0.025 Sum_probs=173.9
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhh--------------------------cCCchHHHHH
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST--------------------------IGISGPFILF 55 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~--------------------------~gwr~~f~~~ 55 (302)
++.+.++.+..|+++|++.+++.+...++|..+++.+++.+... .+||++|.+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~ 192 (410)
T TIGR00885 113 TAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMII 192 (410)
T ss_pred hhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567888899999999999999999999999999999877432 4699999998
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhh
Q 022127 56 SSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMP 135 (302)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (302)
+++.++..+...+ . +.|+.+++ ++++ .+...+.++++|+|+++...+..++..........+++
T Consensus 193 a~~~~~~~~~~~~-~-~~p~~~~~--~~~~------------~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~ 256 (410)
T TIGR00885 193 GAVVLAVALLIML-T-KMPALNHS--DAKQ------------ISFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFII 256 (410)
T ss_pred HHHHHHHHHHHHH-h-cCCCCCcc--cccc------------ccchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877765544332 2 22221110 0000 00112456788999999888888888777778889999
Q ss_pred HHHHHhh-ccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHH
Q 022127 136 IYFNTVF-NVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAV 214 (302)
Q Consensus 136 ~~~~~~~-g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (302)
.|.++.. +.+...++...+.......+|+++++++.||+++| +.+ .+......+...+....++... ..
T Consensus 257 ~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~--------~~l-~i~~~~~~~~~ll~~~~~~~~~-~~ 326 (410)
T TIGR00885 257 QYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAH--------KVL-MAYAIIGMALCLGSIFAGGHVG-LY 326 (410)
T ss_pred HHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH--------HHH-HHHHHHHHHHHHHHHHcCChHH-HH
Confidence 9987632 44444455566666678899999999999999865 222 2334444444444444444333 34
Q ss_pred HHHHHHHHhhhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhhccc-----cchhHHHHHHHHHHHH
Q 022127 215 LITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWL-----GSFQAFLTVTAGLYFV 287 (302)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~-----g~~~~~~~~~~~~~~~ 287 (302)
.+.+.+++.+..+|..++...+..+++..++.+...+. .+|+++.|.+.|.+.|+. |+++..|++...+.+.
T Consensus 327 ~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~ 403 (410)
T TIGR00885 327 CLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAV 403 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH-HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHH
Confidence 44445566666678888888887776554444443333 399999999999999954 4577777765444433
No 85
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.82 E-value=6.2e-18 Score=144.44 Aligned_cols=292 Identities=11% Similarity=0.047 Sum_probs=181.6
Q ss_pred chhhhhhhcccCccc---hhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhc----CCC
Q 022127 2 PAMSTLTSRWFPSHE---RASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT----NDP 74 (302)
Q Consensus 2 p~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~----~~p 74 (302)
|+..++++|++|+++ |++++++.+.+.++|.++||.+++++.++.|||+.|.+.++..++. ++.+...+ +.|
T Consensus 121 ~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~-~l~~~~~~~~~~~~~ 199 (475)
T TIGR00924 121 ANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIG-LLTFFAGRHMLRDIG 199 (475)
T ss_pred CCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHH-HHHHHHcccccccCC
Confidence 667789999998764 8889999999999999999999999999999999999977544443 33333333 222
Q ss_pred CCCCCCChHHHHHHHhc-----------------Ccccc-------------------cCCCCcchHHhhcCccHHHHHH
Q 022127 75 CNSPFVSKSELRLIQAG-----------------KSDSV-------------------KKRNPPSLRHLLSKLPSWTVII 118 (302)
Q Consensus 75 ~~~~~~~~~~~~~~~~~-----------------~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~ 118 (302)
+++++.++++++..... .+... ..+++....+-.|.+.+..+.+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~ 279 (475)
T TIGR00924 200 SVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFL 279 (475)
T ss_pred CCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHH
Confidence 21111111111100000 00000 0000001111112223344444
Q ss_pred HHHhhhHHHHHHHhhhhHHHHHhhccchh----hhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhh
Q 022127 119 ANITNNWGYFVLLSWMPIYFNTVFNVNLK----QAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFI 194 (302)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~----~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 194 (302)
...+....+....+.++.+.++..+.+.. ..+.+.+...+..++..++..++..|.++|+.......|. .++++
T Consensus 280 ~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~--~~G~~ 357 (475)
T TIGR00924 280 EAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKF--TLGML 357 (475)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHH--HHHHH
Confidence 44455555555666678777765444322 2567777778887777777666555666542211111222 35555
Q ss_pred hhHHHHHHhhc---------ccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHh
Q 022127 195 GPGVSLLCLNY---------AKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGT 264 (302)
Q Consensus 195 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~ 264 (302)
+.+++...... ..+.++.+....+...+.....+.......+..| +.||+.+|+......+|..+++.+.
T Consensus 358 l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~ 437 (475)
T TIGR00924 358 FCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLA 437 (475)
T ss_pred HHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555544432 3466666777777777888888999999999988 7899999999999999999999998
Q ss_pred hhhhccccchhHHHHHHHHHHHHHHHHHHhhcc
Q 022127 265 GYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYST 297 (302)
Q Consensus 265 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (302)
....+..+ +...+...++..++..++.++..+
T Consensus 438 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 438 TFGAVPQG-VTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHhcccc-hhhHHHHHHHHHHHHHHHHHHHHH
Confidence 88776654 777777777766666655544433
No 86
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.82 E-value=1.7e-19 Score=142.69 Aligned_cols=269 Identities=20% Similarity=0.145 Sum_probs=199.9
Q ss_pred chhhhhhhcccCcc-chhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSH-ERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFV 80 (302)
Q Consensus 2 p~~~~~i~~~~~~~-~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (302)
.+..++++|.+|++ ||++++|+...+.++|..+||+.||.+.+..|.+.+|.+.+++.++-..+.++.++++..+.+
T Consensus 178 tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~-- 255 (464)
T KOG3764|consen 178 TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPD-- 255 (464)
T ss_pred hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcc--
Confidence 35678999999975 589999999999999999999999999999999999999999999988777776644322211
Q ss_pred ChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHH
Q 022127 81 SKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTM 160 (302)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~ 160 (302)
+ .++..++++++++|.++.........+.+.......++.+..+.+..+.-+.|.......+..
T Consensus 256 ~----------------~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y 319 (464)
T KOG3764|consen 256 S----------------TEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSY 319 (464)
T ss_pred c----------------cccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccch
Confidence 0 112346889999999999888888888888788888899888878855558899988999999
Q ss_pred HhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhc--
Q 022127 161 AVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIA-- 238 (302)
Q Consensus 161 ~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 238 (302)
.++..+.|.+.||+++. |......+++..+......++.++....++..+...+..+...........++.
T Consensus 320 ~ig~~lfg~la~k~~~~-------~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~ 392 (464)
T KOG3764|consen 320 AIGTNLFGKLADKYPHL-------RWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDP 392 (464)
T ss_pred hccCchHHHHHHhcCch-------hHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcch
Confidence 99999999999999865 322323455555555555555555544443333333333333333333333322
Q ss_pred -c-c---hhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhc
Q 022127 239 -P-D---CAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 239 -p-~---~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
. + ..|..+++......+|.++||.++|.+.+..| +.+...+.+...++-.-++.+++
T Consensus 393 rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iG-F~wl~~iig~~n~iyapvl~ll~ 454 (464)
T KOG3764|consen 393 RHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIG-FEWLMTIIGILNLIYAPVLLLLR 454 (464)
T ss_pred hhccccceeeeHHHHHHHHHHHhhhccccccchheeehh-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 2 46899999999999999999999999999998 88888887777776665554443
No 87
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.82 E-value=2.3e-18 Score=151.14 Aligned_cols=176 Identities=16% Similarity=0.213 Sum_probs=131.5
Q ss_pred CchhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhc----------------------CCchHHHHHHHH
Q 022127 1 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI----------------------GISGPFILFSSL 58 (302)
Q Consensus 1 ~p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~----------------------gwr~~f~~~~~~ 58 (302)
+|...+++.|++|+++|++++++...+..+|..+|+++++++.+.+ +||..|++.+++
T Consensus 190 ~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l 269 (633)
T TIGR00805 190 FPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGV 269 (633)
T ss_pred hhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 3667899999999999999999999999999999999999988643 277789888888
Q ss_pred HHHHHHHHHhhhcCC-CCCCCCCC--hHHHHHHHhcCcccc------cCCCCcchHHhhcCccHHHHHHHHHhhhHHHHH
Q 022127 59 GLLWLSTWTSKVTND-PCNSPFVS--KSELRLIQAGKSDSV------KKRNPPSLRHLLSKLPSWTVIIANITNNWGYFV 129 (302)
Q Consensus 59 ~~~~~~~~~~~~~~~-p~~~~~~~--~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (302)
.++..+..++ +|++ |++.++.+ ..+++..++..++++ .++.+...+++++||.++...+..++.....+.
T Consensus 270 ~~l~~v~l~~-~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~ 348 (633)
T TIGR00805 270 ALLTSIPFFF-FPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNG 348 (633)
T ss_pred HHHHHHHHHh-CccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 8877665544 4443 43221111 111110000000000 001123467899999999999999999999999
Q ss_pred HHhhhhHHHHHhhccchhhhhHHhhHHHH-HHHhhhhhhhcccchhhcc
Q 022127 130 LLSWMPIYFNTVFNVNLKQAAWFSAVPWG-TMAVSGYMAGKASDSLIKA 177 (302)
Q Consensus 130 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~ 177 (302)
+..|+|.|+++++|+++.+++.+.....+ +.+++.+++|+++||++.+
T Consensus 349 ~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 349 YITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 99999999999999999999999887766 5688999999999999865
No 88
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.81 E-value=2.3e-20 Score=150.51 Aligned_cols=268 Identities=15% Similarity=0.082 Sum_probs=181.3
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcC-CchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG-ISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFV 80 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (302)
|.++++++|.+|.++|++++++++.+.++|..+|.+.+..+.+..+ |||.|+..+++++++.++.+++.+|+++..+++
T Consensus 140 ~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~ 219 (493)
T KOG1330|consen 140 PIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDE 219 (493)
T ss_pred ccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccc
Confidence 7889999999999999999999999999999999999999988766 999999999999999988888776654422211
Q ss_pred ChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHh---hccchhhhhHHhhHHH
Q 022127 81 SKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTV---FNVNLKQAAWFSAVPW 157 (302)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~s~~~~~~~~~~~~ 157 (302)
.+.+.+ .........++.+.+.|+|.+....+......+...++..|.|.+.... .|.+..+..++..+..
T Consensus 220 ~~~~~~------~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~ 293 (493)
T KOG1330|consen 220 VDGENK------MVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTC 293 (493)
T ss_pred cccCCc------CCCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHH
Confidence 111100 0011112233556667778777777777777777777777777776542 3556666677778889
Q ss_pred HHHHhhhhhhhcccchhhccCCc--hhHHHHHHHHHhhhhhHHHHHHhhccc--chHHHHHHHHHHHHHhhhhhhhhhhH
Q 022127 158 GTMAVSGYMAGKASDSLIKAGYS--LTLVRKIMQSIGFIGPGVSLLCLNYAK--SPAVAAVLITIALSLSSFSQAGYLLN 233 (302)
Q Consensus 158 ~~~~~~~~~~g~l~dr~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (302)
.++.+|.+.+|.++||+.++... ...........+...+...+.+..... +.+..++++.++........+....+
T Consensus 294 ~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i 373 (493)
T KOG1330|consen 294 AGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPI 373 (493)
T ss_pred hhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccce
Confidence 99999999999999996553322 111223333334444444443333332 23334444444444444445555555
Q ss_pred Hhhhcc-chhhhHHHHHHHHHHH-HHHHHHHHhhhhhccccchh
Q 022127 234 IQEIAP-DCAGFLHGIANSAGTL-AAIISTIGTGYFVQWLGSFQ 275 (302)
Q Consensus 234 ~~~~~p-~~~~~~~g~~~~~~~~-g~~i~~~i~g~l~~~~g~~~ 275 (302)
..++.| ++|.++.++-..+..+ |.+-+|++.|.+.|+.-+++
T Consensus 374 ~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 374 FLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred eeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 566555 9999999998877775 55666779999988754344
No 89
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.80 E-value=1.1e-17 Score=133.19 Aligned_cols=261 Identities=13% Similarity=0.115 Sum_probs=188.2
Q ss_pred hhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhh-------------------cCCchHHHHHHHHHHHHH
Q 022127 3 AMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST-------------------IGISGPFILFSSLGLLWL 63 (302)
Q Consensus 3 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-------------------~gwr~~f~~~~~~~~~~~ 63 (302)
+++.+++...|+++..+.+.+.+...++|.+++|++++.+..+ -.||++|...+...+++.
T Consensus 124 aaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~ 203 (422)
T COG0738 124 AANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLA 203 (422)
T ss_pred ccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 5678899999998889999999999999999999999988762 258999998877766655
Q ss_pred HHHHhhhcCCCCCCCCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhc
Q 022127 64 STWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFN 143 (302)
Q Consensus 64 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 143 (302)
+..... +.|+.++..++ + .+.+.....+++|+|+++...+..|++-........|++.|+.+..|
T Consensus 204 v~~~~~--k~p~~~~~~~~-~------------~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g 268 (422)
T COG0738 204 VLILLS--KLPDLQVAAPS-L------------GASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLG 268 (422)
T ss_pred HHHHhc--cCCcCCccccc-c------------cccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCC
Confidence 544332 22222111100 0 00111146789999999999999999999999999999999999889
Q ss_pred cchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHh
Q 022127 144 VNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLS 223 (302)
Q Consensus 144 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (302)
.+..+++...+....+.++|++++.++..|+... |.+. ...++..+.++.....++.+ .+....+.+.+.
T Consensus 269 ~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~--------k~La-f~a~~~ill~~~~~l~~g~v-~~~~l~~ig~F~ 338 (422)
T COG0738 269 LNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE--------KYLA-FYALIAILLLLAVALIGGVV-ALYALFLIGLFN 338 (422)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH--------HHHH-HHHHHHHHHHHHHHHhcChH-HHHHHHHHHHHh
Confidence 9999999999999999999999999998888754 3332 33333333344444455533 344445556677
Q ss_pred hhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHH
Q 022127 224 SFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTI 290 (302)
Q Consensus 224 ~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 290 (302)
+..+|..++...+..|++...+.++ -....+|+++.|++.|++.|+.| ....+......+.+-.+
T Consensus 339 simfPTIfslal~~l~~~ts~~s~~-l~maivGGAiiP~l~G~i~d~~g-~~~~~~~~pllc~lyV~ 403 (422)
T COG0738 339 SIMFPTIFSLALKNLGEHTSVGSGL-LVMAIVGGAIIPPLQGVIADMFG-IQLTFLIVPLLCYLYVL 403 (422)
T ss_pred HHHHHHHHHHHHhccCcccccccee-eeeheecchHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHH
Confidence 8888998888888777555444444 45567899999999999999987 44444433344433333
No 90
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.79 E-value=6e-17 Score=138.53 Aligned_cols=288 Identities=14% Similarity=0.115 Sum_probs=170.8
Q ss_pred chhhhhhhcccCcc--chhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCC-
Q 022127 2 PAMSTLTSRWFPSH--ERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSP- 78 (302)
Q Consensus 2 p~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~- 78 (302)
|...+++.|++|++ +|++++++++.+.++|..+||.+++++.++.|||+.|++.++ +++..++.+...++..++.+
T Consensus 124 ~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i-~~~~~~~~~~~~~~~~~~~~~ 202 (489)
T PRK10207 124 ANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA-GLIIALLVYFACRGMVKDIGS 202 (489)
T ss_pred CCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHHHHcchhhcccCC
Confidence 67789999999877 457899999999999999999999999999999999999654 44444444433332221110
Q ss_pred ---CCChHHHHHH----------------HhcCcccc---------------cCCCCcchHHhhcCccHHHHHHH--HHh
Q 022127 79 ---FVSKSELRLI----------------QAGKSDSV---------------KKRNPPSLRHLLSKLPSWTVIIA--NIT 122 (302)
Q Consensus 79 ---~~~~~~~~~~----------------~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~--~~~ 122 (302)
+.+.+.+... .+...... .++.+ ..+.+|+|.+....+. ...
T Consensus 203 ~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~--~~~~~r~r~~~~~~l~~~~~~ 280 (489)
T PRK10207 203 EPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFK--LDKTGRNKMFVAFVLMLEAVV 280 (489)
T ss_pred CCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHHH
Confidence 0000000000 00000000 00000 1145566655443322 333
Q ss_pred hhHHHHHHHhhhhHHHHHhhccch----hhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHH
Q 022127 123 NNWGYFVLLSWMPIYFNTVFNVNL----KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGV 198 (302)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~g~s~----~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (302)
....+......++.+.++..+.+. .....+.+...+..++.+++.+++.||+++|+.......|.. +++++.++
T Consensus 281 f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~--~G~~l~~~ 358 (489)
T PRK10207 281 FYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFT--LGMFLCSL 358 (489)
T ss_pred HHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHH--HHHHHHHH
Confidence 333444444777778775333221 122334445556676788888999999998864222223333 33333333
Q ss_pred HHHH-------hhcc---cchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhh
Q 022127 199 SLLC-------LNYA---KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYF 267 (302)
Q Consensus 199 ~~~~-------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l 267 (302)
++.. .... .+.+..+....+.+.+..+..+.....+.+..| +.++.++|+.+...++|+.++..+....
T Consensus 359 ~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 359 GFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3321 1111 234555556666677777778888888888777 8899999999999999999999888655
Q ss_pred hc------c---ccchhHHHHHHHHHHHHHHHHHHh
Q 022127 268 VQ------W---LGSFQAFLTVTAGLYFVTTIFWNL 294 (302)
Q Consensus 268 ~~------~---~g~~~~~~~~~~~~~~~~~~~~~~ 294 (302)
.. . .+.+...|...++..++..+++++
T Consensus 439 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 439 AVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred ccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 21 0 112566777777666655555444
No 91
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.78 E-value=3.6e-17 Score=138.63 Aligned_cols=245 Identities=17% Similarity=0.188 Sum_probs=183.4
Q ss_pred hhhhhhcccC-ccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhc-------CCchHHHHHHHHHHHHHHHHHhhhcCCCC
Q 022127 4 MSTLTSRWFP-SHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-------GISGPFILFSSLGLLWLSTWTSKVTNDPC 75 (302)
Q Consensus 4 ~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-------gwr~~f~~~~~~~~~~~~~~~~~~~~~p~ 75 (302)
-.++..|..+ ++||.+..+....+..+|..+...+.+.+.+.. +|++...+.+++.++..++..+..||+++
T Consensus 124 ~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~ 203 (428)
T PF13347_consen 124 YNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSV 203 (428)
T ss_pred hhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccc
Confidence 3567888887 478999999999999999987777777665432 59999999888888877777777777221
Q ss_pred CCCCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhH
Q 022127 76 NSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAV 155 (302)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~ 155 (302)
+.++ + +++.+.++..+++++||+++.+....++............+.|.++..|.+ ...+.....
T Consensus 204 ~~~~--~------------~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~ 268 (428)
T PF13347_consen 204 EVTE--Q------------EKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLI 268 (428)
T ss_pred cccc--c------------ccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHH
Confidence 1110 0 011123446888999999999999999988888888888888888888866 566777778
Q ss_pred HHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcc--cchHHHHHHHHHHHHHhhhhhhhhhhH
Q 022127 156 PWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA--KSPAVAAVLITIALSLSSFSQAGYLLN 233 (302)
Q Consensus 156 ~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (302)
..+...++.++.++++||+|+|+.. ..+..+..++....... ++.+...+...+.+.+.+......+++
T Consensus 269 ~~~~~~v~~~~~~~l~~r~gk~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~ 339 (428)
T PF13347_consen 269 FFVASIVGSPLWGRLSKRFGKKKVY---------IIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAM 339 (428)
T ss_pred HHHHHHHHHHHHHHHHHHccceeeh---------hhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccc
Confidence 8899999999999999999988643 24444444444444333 366666666677777777777777888
Q ss_pred Hhhhcc--------chhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 022127 234 IQEIAP--------DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 272 (302)
Q Consensus 234 ~~~~~p--------~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g 272 (302)
..|..+ ++.|...|+.+....++..+++.+.+.+.+..|
T Consensus 340 ~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 340 LADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred cccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 777665 236899999999999999999999999876543
No 92
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.78 E-value=3e-17 Score=128.83 Aligned_cols=285 Identities=15% Similarity=0.082 Sum_probs=184.1
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 81 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 81 (302)
|...++-.|..|..+|...+-.. ..+.+|.+....+...+..++||||.....+.+..+.+ ...+.+||+|+-.-...
T Consensus 184 pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a-~f~~w~~ESpRf~~~~G 261 (528)
T KOG0253|consen 184 PVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAA-RFLVWVYESPRFYLAKG 261 (528)
T ss_pred cHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHH-HHHhhcccCcchhhhcC
Confidence 55566777888888888877666 99999999999999999999999999888775554444 44556899987321111
Q ss_pred hHHHH-----------------------------HHHhcCccc---ccCCCCcchHHhhcC---ccHHHHHHHHHhhhHH
Q 022127 82 KSELR-----------------------------LIQAGKSDS---VKKRNPPSLRHLLSK---LPSWTVIIANITNNWG 126 (302)
Q Consensus 82 ~~~~~-----------------------------~~~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 126 (302)
++++. +.+.+.++. ..++.+.+..+++.. +....+...+|...+.
T Consensus 262 ~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafs 341 (528)
T KOG0253|consen 262 DDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFS 341 (528)
T ss_pred ChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHH
Confidence 11100 000000000 112223334444432 2334555555666666
Q ss_pred HHHHHhhhhHHHHHhh-------------------ccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHH
Q 022127 127 YFVLLSWMPIYFNTVF-------------------NVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKI 187 (302)
Q Consensus 127 ~~~~~~~~~~~~~~~~-------------------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~ 187 (302)
+++.........+.+. ..+..+.-.=.....+....|.++.++++||+|||+.
T Consensus 342 yyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkT-------- 413 (528)
T KOG0253|consen 342 YYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKT-------- 413 (528)
T ss_pred HHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhH--------
Confidence 6665544444443311 0111111112234567888999999999999998743
Q ss_pred HHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhh
Q 022127 188 MQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGY 266 (302)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~ 266 (302)
+..++++.++..+.+....+......+.+.+-++....+...+.+..|++| ..|+++.|.......+|+++.|.++ .
T Consensus 414 -Mal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~ 491 (528)
T KOG0253|consen 414 -MALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-M 491 (528)
T ss_pred -HHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-H
Confidence 235666666666666555554445556666667777778889999999999 8899999999999999999999998 3
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHHHhhccCcc
Q 022127 267 FVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGER 300 (302)
Q Consensus 267 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (302)
..+. +...+..+.+.+++++.+...+++-++|
T Consensus 492 ~~e~--s~sl~i~vy~~~~ilagIavcffPiEtk 523 (528)
T KOG0253|consen 492 RAEL--STSLPIFVYGALFILAGIAVCFFPIETK 523 (528)
T ss_pred Hhcc--ceeehHHHHHHHHHHHHHHheeeeeccC
Confidence 3333 2445667777777888877777766554
No 93
>PRK09669 putative symporter YagG; Provisional
Probab=99.77 E-value=2.6e-16 Score=134.08 Aligned_cols=242 Identities=11% Similarity=0.036 Sum_probs=156.0
Q ss_pred hhhhhccc-CccchhhHHHHHhhhhhhHHHHHHHHHHHHHh-------hcCCchHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 022127 5 STLTSRWF-PSHERASAIGICMGGFHLGNVVGLLLTPIMLS-------TIGISGPFILFSSLGLLWLSTWTSKVTNDPCN 76 (302)
Q Consensus 5 ~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~ 76 (302)
.++.+|+. +++||++..++...+..+|..+++.+...+.. ..+|+..+.+.++++++..+..++..+|++++
T Consensus 131 ~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~ 210 (444)
T PRK09669 131 CAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTP 210 (444)
T ss_pred HHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCC
Confidence 46778887 45889999999999999998888776655443 24688888888887777666565555554322
Q ss_pred CCCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHH
Q 022127 77 SPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVP 156 (302)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~ 156 (302)
+++ + +.+...+.++++|||.++.+....++............+.|.+...+ +++..+......
T Consensus 211 ~~~----~------------~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~ 273 (444)
T PRK09669 211 EVD----N------------SSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTG 273 (444)
T ss_pred CCc----C------------CCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHH
Confidence 110 0 00112357788999999888877776655555444444444444333 333344455555
Q ss_pred HHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHH-HHHHhhc-ccchHHHHHHHHHHHHHhhhhhhhhhhHH
Q 022127 157 WGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGV-SLLCLNY-AKSPAVAAVLITIALSLSSFSQAGYLLNI 234 (302)
Q Consensus 157 ~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (302)
.+..+++.++.+++.||+|+|+.. . .+.....+ ....... .++.+...+...+.+.+.+...+..+++.
T Consensus 274 ~i~~ii~~~~~~~l~~r~gk~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ 344 (444)
T PRK09669 274 MIAGLFGALLSERLLGKFDRVRAF-------K--WTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMF 344 (444)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHH-------H--HHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677788889999999999876321 1 22222221 2212222 23444444445555666666677778888
Q ss_pred hhhcc--------chhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 022127 235 QEIAP--------DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 272 (302)
Q Consensus 235 ~~~~p--------~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g 272 (302)
.|..+ +..|...|..+....+|.++++.+.|.+.+..|
T Consensus 345 ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~G 390 (444)
T PRK09669 345 SDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVD 390 (444)
T ss_pred HhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 77654 225678899999999999999999999988654
No 94
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.76 E-value=9.4e-17 Score=121.83 Aligned_cols=273 Identities=18% Similarity=0.221 Sum_probs=174.7
Q ss_pred hhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCc------hHHHH---HHHHHHHHHHHHHhhhcCC
Q 022127 3 AMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGIS------GPFIL---FSSLGLLWLSTWTSKVTND 73 (302)
Q Consensus 3 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr------~~f~~---~~~~~~~~~~~~~~~~~~~ 73 (302)
+-+++...||..||.+.++|+..+..-+|..+--.+.+++.+..+-- ....+ .+.......+++...+
T Consensus 156 aQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~l--- 232 (459)
T KOG4686|consen 156 AQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSL--- 232 (459)
T ss_pred hhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 45678899999999999999999999999998888888887654311 11111 1111111111111111
Q ss_pred CCCCCCCChHHHHH--HHhcCcccccCCCCcchHHhhc-CccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhh
Q 022127 74 PCNSPFVSKSELRL--IQAGKSDSVKKRNPPSLRHLLS-KLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAA 150 (302)
Q Consensus 74 p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~ 150 (302)
...+++..+. .++....|.. ...+... .|.+|.+.+..++.+...+.+...-|.++++++|+|+.+++
T Consensus 233 ----g~~D~rAerilh~e~g~~Ge~p-----kLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~ 303 (459)
T KOG4686|consen 233 ----GLSDDRAERILHLEEGFLGEEP-----KLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAG 303 (459)
T ss_pred ----hhhhhHHHHHHhhhcCcccCCc-----ccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhcc
Confidence 0001111111 1111111100 1111111 37899999999999999999999999999999999999999
Q ss_pred HHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcc-cchHHHHHHHHHHHHHhhhhhhh
Q 022127 151 WFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA-KSPAVAAVLITIALSLSSFSQAG 229 (302)
Q Consensus 151 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 229 (302)
.+.+.....+.+.+++.|.++||.|++-... ..+.+....+-..+.+. .+++... ++.+.........
T Consensus 304 ~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv--------~~a~~~tl~~H~~l~Ft~lsPy~~m---~~lGLsysllAcs 372 (459)
T KOG4686|consen 304 NILSTVYGISAVLSPVFGAISDKYGFNLWWV--------ASACILTLLGHSGLFFTFLSPYTSM---TFLGLSYSLLACS 372 (459)
T ss_pred chhhhhhhhhhhhhhhHHHhHhhhcceehhH--------HHHHHHHHHHhhhHHhhhccHHHHH---HHHhhhHHHHHHH
Confidence 9999999999999999999999999874321 12222222222222222 2444333 2223223333344
Q ss_pred hhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhH---HHHHHHHHHHHHHHHHHhhccC
Q 022127 230 YLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQA---FLTVTAGLYFVTTIFWNLYSTG 298 (302)
Q Consensus 230 ~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~ 298 (302)
.+..+..+.| ++.|+++|.++.++|+|-++.|.+.|.+.|+-|+|.. .|..+..+++.+..+.+.+.++
T Consensus 373 lWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N~k 445 (459)
T KOG4686|consen 373 LWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLNKK 445 (459)
T ss_pred HhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhheecc
Confidence 6777788888 7789999999999999999999999999998876543 4455555566655555555444
No 95
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.74 E-value=3.9e-16 Score=125.30 Aligned_cols=276 Identities=13% Similarity=0.061 Sum_probs=203.1
Q ss_pred hhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHH--H----------------hhcCCchHHHHHHHHHHHHHHHH
Q 022127 5 STLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIM--L----------------STIGISGPFILFSSLGLLWLSTW 66 (302)
Q Consensus 5 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l--~----------------~~~gwr~~f~~~~~~~~~~~~~~ 66 (302)
.+++.|..++++-++..+.-.....+|..+.-...-.. . +...-|..+.+.++--++..+..
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm 216 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPM 216 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHH
Confidence 46788899999889999888888888888766554221 1 12346778888888777777777
Q ss_pred HhhhcCCCCCCCCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccch
Q 022127 67 TSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNL 146 (302)
Q Consensus 67 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~ 146 (302)
+...+|.++......+.-++..++ -..+.+++.+++++....+..++..-+..+.......|....+|++.
T Consensus 217 ~~~v~~~~~~~~~~~~~l~~g~k~---------L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~ 287 (438)
T COG2270 217 ILNVHDAEKISSPPPTALRNGFKE---------LKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSS 287 (438)
T ss_pred HhcccccccccccchHHHHHHHHH---------HHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccH
Confidence 777766654321111111111111 12357888889999999999999999999999999999998899999
Q ss_pred hhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhh
Q 022127 147 KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFS 226 (302)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (302)
.+...+.....+..++|+++.|++.||+|.|+... .++++..+..+...+.......+.+-.+.+...+..
T Consensus 288 ~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~---------~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~ 358 (438)
T COG2270 288 TELLLIGIALSVVAALGAIIAGFLDERFGSKPVLM---------IGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGA 358 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeh---------HHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchH
Confidence 99999999999999999999999999999885432 333332222222222333333344434445555666
Q ss_pred hhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhccC
Q 022127 227 QAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTG 298 (302)
Q Consensus 227 ~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (302)
++...++..+..| ++.++..|+++..+...+..||.+.+.+.+.+|+.+..+....++..++.++....+.+
T Consensus 359 qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 359 QASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 6777777888777 88999999999999999999999999999999999999999888888888776655543
No 96
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.73 E-value=8.8e-16 Score=125.59 Aligned_cols=263 Identities=14% Similarity=0.105 Sum_probs=180.4
Q ss_pred hhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCChHHHHHHHhcCcccc
Q 022127 17 RASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSV 96 (302)
Q Consensus 17 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 96 (302)
.+.-.|-.-+.+++|.+++..++|.+.+. +-+..||+....+++..++.....|+.+++.+..+.++. ++
T Consensus 136 ~~feYG~~R~wGSig~ai~s~~~G~L~~i-~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~---------~~ 205 (412)
T PF01306_consen 136 NGFEYGRARMWGSIGFAIASLLAGILFNI-NPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGA---------KK 205 (412)
T ss_dssp HSS-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS-----------
T ss_pred hcCCcchHHHHhhHHHHHHHHHhheeeee-CccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhccccc---------CC
Confidence 34455677788899999999999998864 446778876666666555555544444432221111100 00
Q ss_pred cCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhh---ccchhhhhHHhhHHHHHHHhhhhhhhcccch
Q 022127 97 KKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVF---NVNLKQAAWFSAVPWGTMAVSGYMAGKASDS 173 (302)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 173 (302)
++....+..+++|+|++|.+.+........+..+....|.|.++.+ +.+....|++.+...+..++...+.+++.+|
T Consensus 206 ~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~r 285 (412)
T PF01306_consen 206 DKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINR 285 (412)
T ss_dssp ----HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0011123568899999999888887777777777777888887633 3445668888888889999999999999999
Q ss_pred hhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHH-HH
Q 022127 174 LIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIA-NS 251 (302)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~-~~ 251 (302)
+|.| +.+ .++..+..+=.......++++.....-.+-+.-.........-++.+..| |..++...+. +.
T Consensus 286 ig~k--------~~L-llag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~ 356 (412)
T PF01306_consen 286 IGAK--------NLL-LLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQF 356 (412)
T ss_dssp H-HH--------HHH-HHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTT
T ss_pred cChH--------hHH-HHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHH
Confidence 9965 223 34555556666677778888877777777777777777777788888887 6678888885 67
Q ss_pred HHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhccCc
Q 022127 252 AGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGE 299 (302)
Q Consensus 252 ~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (302)
..+++..+.+.+.|.+.|+.| ++..+++.+.+.+...++..+..+++
T Consensus 357 ~~~~~~~i~s~~~G~lyd~~G-~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 357 AKQIGIIILSPLAGYLYDRIG-FQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp THHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHHHHHHHHhhhHHhhHhhcC-cHHHHHHHHHHHHHHHHHheeeecCC
Confidence 788999999999999999998 88899888888776666655544443
No 97
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.73 E-value=4e-15 Score=123.68 Aligned_cols=260 Identities=15% Similarity=0.116 Sum_probs=169.1
Q ss_pred hhhHHHHHhhhhhhHHHHHHHH-HHHHHhhcC---CchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCChHHHHHHHhcC
Q 022127 17 RASAIGICMGGFHLGNVVGLLL-TPIMLSTIG---ISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGK 92 (302)
Q Consensus 17 r~~~~~~~~~~~~~g~~~~~~~-~~~l~~~~g---wr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 92 (302)
+++-.|-....+++|-+++... ++.+....+ ....+++.+...++.... .+.+|+.|.+++..++.+
T Consensus 123 ~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~-~l~lp~~~~~~~~~~~~~-------- 193 (400)
T PF03825_consen 123 RGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGF-ALFLPKTPPKRSAKESVK-------- 193 (400)
T ss_pred ccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHH-HHhCCCCccccccCCCcc--------
Confidence 3444455566667777666543 233333333 234566655555444333 334677663222111110
Q ss_pred cccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccc
Q 022127 93 SDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASD 172 (302)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 172 (302)
+....+..+++|||++....+..++..........+.+.|+++.-|.+....+...+...+..++.....+++.+
T Consensus 194 -----~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~ 268 (400)
T PF03825_consen 194 -----KLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLK 268 (400)
T ss_pred -----cccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011123457999999999988888888888889999999999944377778888888888888888888899989
Q ss_pred hhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcc-cchHHHHHHHHH----HHHHhhhhhhhhhhHHhhhcc-chhhhHH
Q 022127 173 SLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA-KSPAVAAVLITI----ALSLSSFSQAGYLLNIQEIAP-DCAGFLH 246 (302)
Q Consensus 173 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~p-~~~~~~~ 246 (302)
|+|.+ .++.++.+..++=..+.... ++.+.......+ -+...+..+.....++.+..| +.|+++.
T Consensus 269 r~g~~---------~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q 339 (400)
T PF03825_consen 269 RFGIK---------WLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQ 339 (400)
T ss_pred hcCHH---------HHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHH
Confidence 88854 23345655555555555554 343333333333 445556666677777888888 7899999
Q ss_pred HHHHHHH-HHHHHHHHHHhhhhhcccc-----chhHHHHHHHHHHHHHHHHHHhhccCc
Q 022127 247 GIANSAG-TLAAIISTIGTGYFVQWLG-----SFQAFLTVTAGLYFVTTIFWNLYSTGE 299 (302)
Q Consensus 247 g~~~~~~-~~g~~i~~~i~g~l~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (302)
++++... .+|..+|..++|++.|+.| .+...+.+.+++.++..+++.++.|++
T Consensus 340 ~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 340 GLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 9988765 6899999999999999876 234556666666666666666555554
No 98
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.73 E-value=2.2e-15 Score=126.92 Aligned_cols=283 Identities=14% Similarity=0.105 Sum_probs=184.9
Q ss_pred hhhhhhhcccCccch--hhHHHHHhhhhhhHHHHHHHHHHHH--Hhhc-------------CCchHHHHHHHHHHHHHHH
Q 022127 3 AMSTLTSRWFPSHER--ASAIGICMGGFHLGNVVGLLLTPIM--LSTI-------------GISGPFILFSSLGLLWLST 65 (302)
Q Consensus 3 ~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~~~~~l--~~~~-------------gwr~~f~~~~~~~~~~~~~ 65 (302)
+..++++|.+|+++| +.+.++.+...++|.++|+.+++.. .+.+ +.|..|++.+++.++..++
T Consensus 134 p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~ 213 (477)
T TIGR01301 134 PCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYI 213 (477)
T ss_pred HHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHH
Confidence 456889999998765 6899999999999999999999875 2222 5688999988877777777
Q ss_pred HHhhhcCCCCCCCCCChHHHHHHHhcCcccccCCCCcchHHhhcC-----ccHHHHHHHHHhhhHHHHHHHhhhhHHHH-
Q 022127 66 WTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSK-----LPSWTVIIANITNNWGYFVLLSWMPIYFN- 139 (302)
Q Consensus 66 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 139 (302)
..+..||+|..+++..+++ +. +++++.+....+++++++ |.++.+++..++...+.+.+..|...|+.
T Consensus 214 t~~~v~E~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~ 287 (477)
T TIGR01301 214 ALSAVKENPLIGSDDFINS--EA----APPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGR 287 (477)
T ss_pred HeeeeeccCCCccccchhh--hc----ccccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 7777888764322111000 00 011111111234444443 57899999999999999999999998876
Q ss_pred Hhhccchh------h----hhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccc-
Q 022127 140 TVFNVNLK------Q----AAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKS- 208 (302)
Q Consensus 140 ~~~g~s~~------~----~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 208 (302)
+.++-++. + ..+......+...+.+++..++.+|+|+| |....++.++.++++....+..+
T Consensus 288 ~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~--------k~~~~~s~~~~~~~l~~~~~i~~~ 359 (477)
T TIGR01301 288 EVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAG--------KRLWGIVNIILAICLAATVLVTYV 359 (477)
T ss_pred HHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--------hhHHHHHHHHHHHHHHHHHHHHhh
Confidence 45554321 1 12233344555556666777788888753 22223454444444433332111
Q ss_pred --------------------hHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc---chhhhHHHHHHHHHHHHHHHHHHHhh
Q 022127 209 --------------------PAVAAVLITIALSLSSFSQAGYLLNIQEIAP---DCAGFLHGIANSAGTLAAIISTIGTG 265 (302)
Q Consensus 209 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~g~~~~~~~~g~~i~~~i~g 265 (302)
.+..+..+...++.....+...++++++..+ +..|..+|+.|.+..+.+.+.....|
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g 439 (477)
T TIGR01301 360 AKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSG 439 (477)
T ss_pred hhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 2444555555556666666777777777666 34699999999999999999999888
Q ss_pred hhhcccc-chhHHHHHHHHHHHHHHHHHHhhccCc
Q 022127 266 YFVQWLG-SFQAFLTVTAGLYFVTTIFWNLYSTGE 299 (302)
Q Consensus 266 ~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (302)
.+.+..| +....+.+.++.++++.+......++.
T Consensus 440 ~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~ 474 (477)
T TIGR01301 440 PWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRP 474 (477)
T ss_pred HHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCC
Confidence 8666555 355678888888888877766554443
No 99
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.72 E-value=8.6e-15 Score=117.88 Aligned_cols=275 Identities=13% Similarity=0.128 Sum_probs=193.0
Q ss_pred hhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHH---HHHHHHHHHHHhhhcCCCCCCCCC
Q 022127 4 MSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFS---SLGLLWLSTWTSKVTNDPCNSPFV 80 (302)
Q Consensus 4 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~---~~~~~~~~~~~~~~~~~p~~~~~~ 80 (302)
..++++|..|||+|+++.++...+.-+|.+++..+.+.+.+.++-.-..-+.. .+.++..++..+ -.|.+.++..
T Consensus 110 ~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia~w-g~E~r~~~~~- 187 (403)
T PF03209_consen 110 FLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNLIALW-GQEPRRSRRA- 187 (403)
T ss_pred HHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHHHH-hcccCCcccc-
Confidence 45788999999999999999999999999999999999988776433333322 223332222222 2222221111
Q ss_pred ChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHH
Q 022127 81 SKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTM 160 (302)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~ 160 (302)
+ .+++++.+....++++..+|+........+.....++.-...+-+|--+++|+++.+...+......+.
T Consensus 188 ~----------~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~ 257 (403)
T PF03209_consen 188 A----------AAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGT 257 (403)
T ss_pred c----------CCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHH
Confidence 0 001111222346788889999888888888888888888899999999999999999999999999999
Q ss_pred Hhhhhhhhcccch-hhccCCchhHHHHHHHHHhhhhhHHHH---HHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhh
Q 022127 161 AVSGYMAGKASDS-LIKAGYSLTLVRKIMQSIGFIGPGVSL---LCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQE 236 (302)
Q Consensus 161 ~~~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (302)
.++....|++..| .++++. + ..++..+..++ +......+.+.......+.++..+.......+.+.+
T Consensus 258 L~G~~~~g~~l~~~~~~~~~-----a----~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~ 328 (403)
T PF03209_consen 258 LLGMLLAGFLLSRRLGKKRT-----A----ALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMD 328 (403)
T ss_pred HHHHHHHHHHhcCCCCchHH-----H----HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHh
Confidence 9999999987664 333211 1 23333333333 233344566666666677777777777777777777
Q ss_pred hcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccc----c-----chhHHHHHHHHHHHHHHHHHHhhccCc
Q 022127 237 IAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWL----G-----SFQAFLTVTAGLYFVTTIFWNLYSTGE 299 (302)
Q Consensus 237 ~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~----g-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (302)
..+ ++.|..+|.....+.++..++..++|.+.|.. + .|..+|.+-++..+++..+..-+.+++
T Consensus 329 lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~~l~~~~ 401 (403)
T PF03209_consen 329 LTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLGRLDRRE 401 (403)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 775 88999999999999999999999999987741 2 377778877777777766655444443
No 100
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.72 E-value=3.4e-15 Score=123.42 Aligned_cols=246 Identities=15% Similarity=0.119 Sum_probs=183.1
Q ss_pred hhhhcccC-ccchhhHHHHHhhhhhhHHHHHHHHHHHHHh-------hcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 022127 6 TLTSRWFP-SHERASAIGICMGGFHLGNVVGLLLTPIMLS-------TIGISGPFILFSSLGLLWLSTWTSKVTNDPCNS 77 (302)
Q Consensus 6 ~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~ 77 (302)
++..|..+ ++||.+..++.+.+.++|..+...+...+.. ..||+..-.+.++++.+..+.+++..+|++.+.
T Consensus 135 al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~ 214 (467)
T COG2211 135 ALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVET 214 (467)
T ss_pred hcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCcc
Confidence 44555555 5899999999999999998888777776664 347888888888888888888888888876533
Q ss_pred CCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHH
Q 022127 78 PFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPW 157 (302)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~ 157 (302)
...+++++. +.+.....+++||++...++..++..............|.+..+|.+............
T Consensus 215 ~~~~~~~~~------------~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~ 282 (467)
T COG2211 215 QPTKTGVKL------------KLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASG 282 (467)
T ss_pred ccCcccccc------------cHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHH
Confidence 221111111 11223456889999999999888888787777888888888888888888878877777
Q ss_pred HHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhccc--chHHHHHHHHHHHHHhhhhhhhhhhHHh
Q 022127 158 GTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK--SPAVAAVLITIALSLSSFSQAGYLLNIQ 235 (302)
Q Consensus 158 ~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (302)
.+.+++.++..++.+|+|+|+.. ..+.++..++...+.+.+ +....++..++...+.+...+..+++.+
T Consensus 283 ~~~l~~~~~~p~L~~~~gkk~~~---------~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~ 353 (467)
T COG2211 283 AGLLIGLILWPRLVKKFGKKKLF---------LIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVA 353 (467)
T ss_pred HHHHHHHHhHHHHHHHhchHHHH---------HHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhc
Confidence 78888899999999999976432 244555555554444443 4455555557777778888888898887
Q ss_pred hhcc-c-------hhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 022127 236 EIAP-D-------CAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 272 (302)
Q Consensus 236 ~~~p-~-------~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g 272 (302)
|..+ + ..|...|...++..+|.+++..+.|+..+..|
T Consensus 354 d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 354 DTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred chhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 7654 2 26888999999999999999999999987654
No 101
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.72 E-value=2.9e-16 Score=123.90 Aligned_cols=259 Identities=16% Similarity=0.093 Sum_probs=160.6
Q ss_pred hhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHh---hcCCchHHHHHHHHHHHH----HHHHHhhhcCCCC
Q 022127 3 AMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS---TIGISGPFILFSSLGLLW----LSTWTSKVTNDPC 75 (302)
Q Consensus 3 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~gwr~~f~~~~~~~~~~----~~~~~~~~~~~p~ 75 (302)
...++++|.+++|+|++.++......++|.++||.+|+++.+ ..| +.+|.....+..+. .....+++||+-+
T Consensus 140 v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~ 218 (451)
T KOG2615|consen 140 VIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETLP 218 (451)
T ss_pred HHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 356899999999999999999999999999999999999987 233 22333322222221 1223344677643
Q ss_pred CCCCCChHHHHHHHhcCccc--ccCCCCcchHHhhcCccHH-------HHHHHHHhhhHHHHHHHhhhhHHHHHhhccch
Q 022127 76 NSPFVSKSELRLIQAGKSDS--VKKRNPPSLRHLLSKLPSW-------TVIIANITNNWGYFVLLSWMPIYFNTVFNVNL 146 (302)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~ 146 (302)
.++.. +|....++..+++ ..+..+.......||++.. ...+..+.+...+.....+.+.+-++.+|+++
T Consensus 219 ~rk~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss 296 (451)
T KOG2615|consen 219 LRKRN--DEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSS 296 (451)
T ss_pred chhhc--ccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCCh
Confidence 33222 1111111111111 0000111122334554322 22333333343333444444444466799999
Q ss_pred hhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhh
Q 022127 147 KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFS 226 (302)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (302)
.+.|.+.+..++.+.+.........||.+.. .+.....++..+.-...++.....+........+..+.....
T Consensus 297 ~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~-------~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~ 369 (451)
T KOG2615|consen 297 MQQGKVLSTTGLLMLVIQLALVPILPRYKGN-------IKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASV 369 (451)
T ss_pred hhheeeeehhhHHHHHHHHhccccccccccc-------hhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHh
Confidence 9999999988888888777766666666422 122223444444445555555555555555566666666667
Q ss_pred hhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 022127 227 QAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWL 271 (302)
Q Consensus 227 ~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~ 271 (302)
.+....+.....| ++||+.+|+..+.+.++.++||.+.|.+..+.
T Consensus 370 vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws 415 (451)
T KOG2615|consen 370 VTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWS 415 (451)
T ss_pred hHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEe
Confidence 7777888888888 89999999999999999999999999887653
No 102
>PRK09848 glucuronide transporter; Provisional
Probab=99.72 E-value=5e-15 Score=126.37 Aligned_cols=161 Identities=14% Similarity=0.059 Sum_probs=114.3
Q ss_pred chHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchh
Q 022127 103 SLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLT 182 (302)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 182 (302)
.+++++|||+++...+..++............|.|+++.+|.++...++......++.+++.++.+++.||+++|+.
T Consensus 220 ~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~--- 296 (448)
T PRK09848 220 SLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNT--- 296 (448)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH---
Confidence 46789999999998888888888888888888888888888777665555555566778889999999999987532
Q ss_pred HHHHHHHHHhhhhhHHHHHHhhccc--chHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-c-------hhhhHHHHHHHH
Q 022127 183 LVRKIMQSIGFIGPGVSLLCLNYAK--SPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-D-------CAGFLHGIANSA 252 (302)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~-------~~~~~~g~~~~~ 252 (302)
+ ..+..+..++...+...+ +.+.......+.+.+.+...+...+...|..| + ++|...|+.+..
T Consensus 297 -----~-~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~ 370 (448)
T PRK09848 297 -----F-LIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFT 370 (448)
T ss_pred -----H-HHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHH
Confidence 2 234444344333333322 33333333444555566666667777777665 2 358999999999
Q ss_pred HHHHHHHHHHHhhhhhcccc
Q 022127 253 GTLAAIISTIGTGYFVQWLG 272 (302)
Q Consensus 253 ~~~g~~i~~~i~g~l~~~~g 272 (302)
..+|..+++.+.+.+.+..|
T Consensus 371 ~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 371 RKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999876544
No 103
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.71 E-value=6.3e-15 Score=126.05 Aligned_cols=255 Identities=13% Similarity=0.057 Sum_probs=166.5
Q ss_pred hhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCC-CCCChHH
Q 022127 6 TLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNS-PFVSKSE 84 (302)
Q Consensus 6 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~ 84 (302)
..++|..|.|.|....++.....-.....++.++..+..+-+|||.|++..+...+.+++.+++..++++++ +..+...
T Consensus 153 ~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~ 232 (599)
T PF06609_consen 153 LAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSK 232 (599)
T ss_pred HHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcH
Confidence 457999999999888877776666666677777777766779999999998877775555443332222111 1111111
Q ss_pred HHHHHh------------------------cCcc------------------------cc--cCCCCcchHHhhcC-ccH
Q 022127 85 LRLIQA------------------------GKSD------------------------SV--KKRNPPSLRHLLSK-LPS 113 (302)
Q Consensus 85 ~~~~~~------------------------~~~~------------------------~~--~~~~~~~~~~~~~~-~~~ 113 (302)
++.+.+ .... |. +.+++.-..+++|+ |.+
T Consensus 233 ~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~ 312 (599)
T PF06609_consen 233 REQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGF 312 (599)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhccchHH
Confidence 111111 0000 11 11233445678888 456
Q ss_pred HHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchh---hhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHH
Q 022127 114 WTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLK---QAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS 190 (302)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 190 (302)
....+..+.....++....+.|+.....++-|+. +.++.....+++..++.++.|.+..++++- |+.+.
T Consensus 313 ~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~--------Kw~li 384 (599)
T PF06609_consen 313 AALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHI--------KWQLI 384 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccch--------hHHHH
Confidence 6666777777778888888999988887877653 567787888888999999999999888754 33333
Q ss_pred HhhhhhHH--HHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhh
Q 022127 191 IGFIGPGV--SLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYF 267 (302)
Q Consensus 191 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l 267 (302)
.+.+.... +.+.....++....+....+.+++.+..........+-..| ++.|++.|+..+++.+|+.+|..+...+
T Consensus 385 ~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I 464 (599)
T PF06609_consen 385 FGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAI 464 (599)
T ss_pred HHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 34333332 33333334454445566666666666655555666666666 8899999999999999999999887665
Q ss_pred h
Q 022127 268 V 268 (302)
Q Consensus 268 ~ 268 (302)
.
T Consensus 465 ~ 465 (599)
T PF06609_consen 465 F 465 (599)
T ss_pred H
Confidence 4
No 104
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.70 E-value=5.8e-16 Score=124.20 Aligned_cols=179 Identities=12% Similarity=0.079 Sum_probs=153.0
Q ss_pred cHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHH
Q 022127 112 PSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSI 191 (302)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 191 (302)
.+....+.+...+...-.+..-.|...++ .++|..|.|.+.+...+...++..+.|.++||.+.|+.. ..
T Consensus 30 if~~~fiGYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm---------~~ 99 (448)
T COG2271 30 IFLSIFIGYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFM---------AF 99 (448)
T ss_pred HHHHHHHHHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceee---------hH
Confidence 44556666666666666777777776666 789999999999999999999999999999999977543 48
Q ss_pred hhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHh--hhhh
Q 022127 192 GFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGT--GYFV 268 (302)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~--g~l~ 268 (302)
+++++++..+++.+.++.....++..+.+.+.+...|+....+.+.+| ++||+..++.|+..|+|+++.|.+. +.+.
T Consensus 100 gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~ 179 (448)
T COG2271 100 GLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFA 179 (448)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHH
Confidence 888999999999999888888888888999999999999999988887 8999999999999999999999999 8888
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHhhccCccc
Q 022127 269 QWLGSFQAFLTVTAGLYFVTTIFWNLYSTGERV 301 (302)
Q Consensus 269 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (302)
++. +|+..|++-++++++..++.+...|++.|
T Consensus 180 ~~~-~w~~~f~~pgiiaiival~~~~~~rd~Pq 211 (448)
T COG2271 180 FHG-GWRAAFYFPGIIAIIVALILLFLLRDRPQ 211 (448)
T ss_pred hcc-chhHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 876 49999999999988887777777666543
No 105
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.68 E-value=5.1e-15 Score=125.71 Aligned_cols=170 Identities=14% Similarity=0.147 Sum_probs=131.2
Q ss_pred cHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHH
Q 022127 112 PSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSI 191 (302)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 191 (302)
.++...+..+..+........++|.+.++ +|.|..+.++..+...++..++.++.|++.||+|+|+.. ..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~---------~~ 93 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFM---------GI 93 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhH---------HH
Confidence 34445555555555556677888888887 999999999999999999999999999999999987432 35
Q ss_pred hhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 022127 192 GFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQW 270 (302)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~ 270 (302)
+.++..++.......++.+.......+.+.+.+...+.......+..| ++|++++|+.+...++|..++|.+.+.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 173 (434)
T PRK11663 94 GLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALH 173 (434)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 555556666666666666555555555555566666777788888888 7899999999999999999999999999988
Q ss_pred ccchhHHHHHHHHHHHHHHHHH
Q 022127 271 LGSFQAFLTVTAGLYFVTTIFW 292 (302)
Q Consensus 271 ~g~~~~~~~~~~~~~~~~~~~~ 292 (302)
.| |+..|.+.++..++..+..
T Consensus 174 ~g-w~~~f~~~~i~~~~~~~~~ 194 (434)
T PRK11663 174 YG-WRYGMMIAGIIAIVVGLFL 194 (434)
T ss_pred cc-HHHHHHHHHHHHHHHHHHH
Confidence 76 9999988877665544433
No 106
>PRK10054 putative transporter; Provisional
Probab=99.68 E-value=4.3e-15 Score=124.54 Aligned_cols=172 Identities=8% Similarity=0.065 Sum_probs=131.7
Q ss_pred ccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHH
Q 022127 111 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS 190 (302)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 190 (302)
|+++.+.+..++...+.+....++|.|+++++|+|..+.|+..+...+...++.+..|+++||+|+|+.. .
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~---------~ 77 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYM---------L 77 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhH---------H
Confidence 4567777888888888888899999999988999999999999999999999999999999999987422 2
Q ss_pred HhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhc
Q 022127 191 IGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ 269 (302)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~ 269 (302)
.+.....++.....+.++.+.......+.+...+...+.......|..| ++|+++.|+.+...++|..++|.+.+.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~ 157 (395)
T PRK10054 78 LAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM 157 (395)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444445555555556665544444333333334445556667777776 789999999999999999999999999875
Q ss_pred cccchhHHHHHHHHHHHHHHHHHH
Q 022127 270 WLGSFQAFLTVTAGLYFVTTIFWN 293 (302)
Q Consensus 270 ~~g~~~~~~~~~~~~~~~~~~~~~ 293 (302)
.+ |+..|.+.+++.+++.+...
T Consensus 158 -~g-~~~~f~~~~~~~~i~~i~~~ 179 (395)
T PRK10054 158 -QS-INLPFWLAAICSAFPLVFIQ 179 (395)
T ss_pred -hc-cCcHHHHHHHHHHHHHHHHH
Confidence 44 88899988877777655443
No 107
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.68 E-value=1.4e-14 Score=124.28 Aligned_cols=248 Identities=10% Similarity=0.002 Sum_probs=155.8
Q ss_pred hhhhhhccc-CccchhhHHHHHhhhhhhHHHHHHHHHHHHHhh-------cCCchHHHHHHHHHHHHHHHHHhhhcCCCC
Q 022127 4 MSTLTSRWF-PSHERASAIGICMGGFHLGNVVGLLLTPIMLST-------IGISGPFILFSSLGLLWLSTWTSKVTNDPC 75 (302)
Q Consensus 4 ~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-------~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~ 75 (302)
-.++..|.. +++||.+..++...+.++|..+.+.+...+.+. .+|+....+.+++.++..+..++..||+++
T Consensus 127 ~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~ 206 (473)
T PRK10429 127 FWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYS 206 (473)
T ss_pred HHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCC
Confidence 346778888 578999999998888888877766655544332 246666666666666555555555666532
Q ss_pred CCCCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhH
Q 022127 76 NSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAV 155 (302)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~ 155 (302)
+++..++ + +++.+.+..++.+++||.++.+....++..........+.+.|.+...+ +....+.+...
T Consensus 207 ~~~~~~~-~----------~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~ 274 (473)
T PRK10429 207 SDNQVSA-E----------GSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSY 274 (473)
T ss_pred ccccccc-c----------ccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHH
Confidence 2110000 0 0001112245567789998888888887777777666776766665433 55566667677
Q ss_pred HHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHH---h--hcccchHHHHHHHHHHHHHhhhhhhhh
Q 022127 156 PWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLC---L--NYAKSPAVAAVLITIALSLSSFSQAGY 230 (302)
Q Consensus 156 ~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (302)
..++.+++.++.+++.||+|+|+.. . .+..+..++... . ...++.+...+...+.+.+.+...+..
T Consensus 275 ~~i~~ii~~~~~~~l~~r~gkk~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~ 345 (473)
T PRK10429 275 AGAANLVTLILFPRLVKSLSRRILW-------A--GASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQ 345 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcCcHHHH-------H--HHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788899999999999999986322 1 222222212111 1 112233333334444445555556666
Q ss_pred hhHHhhhcc--------chhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 022127 231 LLNIQEIAP--------DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 272 (302)
Q Consensus 231 ~~~~~~~~p--------~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g 272 (302)
.++.+|..+ +..|...|..+....++..+++.+.|.+.+..|
T Consensus 346 ~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 346 VIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIG 395 (473)
T ss_pred HHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 777777644 225668999999999999999999999987654
No 108
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.67 E-value=2.8e-15 Score=127.88 Aligned_cols=257 Identities=13% Similarity=0.004 Sum_probs=157.2
Q ss_pred hhhhhhhcccCccchhhHH---HHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCC-CCC
Q 022127 3 AMSTLTSRWFPSHERASAI---GICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPC-NSP 78 (302)
Q Consensus 3 ~~~~~i~~~~~~~~r~~~~---~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~-~~~ 78 (302)
+.-++..|..+ |+++... ++.....++|..+++.++|.+.+.++||..|++.+.+.++.. ....+.+|++. ..+
T Consensus 140 ~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~-~~~~~~~E~~~~~~~ 217 (468)
T TIGR00788 140 LVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQL-FVSNLSKERRAFVRP 217 (468)
T ss_pred hHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHH-HHHHhcccccccccc
Confidence 45567788887 5444433 333444558999999999999999999999999888877763 33445666531 111
Q ss_pred CCChHHHH---HHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHh-hhHHHHHHHhhhhHHHHHhhccchhhhhHHhh
Q 022127 79 FVSKSELR---LIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANIT-NNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSA 154 (302)
Q Consensus 79 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 154 (302)
+.++++.. ....... +..++.....++.+++|.++...+..++ ............ .+.++..|+++.+.|....
T Consensus 218 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f-~~~~~~lG~s~~~~G~~~~ 295 (468)
T TIGR00788 218 RIGTYLEMNMALLTLGVL-ANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVF-CATTQCLPGGPSFSGMSKV 295 (468)
T ss_pred cccccchhhhhhhhhhHH-HHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeE-EEEcccCCCCcchhhhHHH
Confidence 11110000 0000000 0000001134556788888775555544 221111111110 1233458999999999999
Q ss_pred HHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc----------ccchHHHHHHHHHHHHHhh
Q 022127 155 VPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY----------AKSPAVAAVLITIALSLSS 224 (302)
Q Consensus 155 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~ 224 (302)
..+++.+++....+++.+|++.| +.+ .++.++..++...... .++.+.......+.....+
T Consensus 296 ~~~v~~i~g~~~~~~~~~~~~~r--------~~l-~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g 366 (468)
T TIGR00788 296 VGNLGSLCGVGGYDRFLKTFPYR--------LLF-GVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQ 366 (468)
T ss_pred HHHHHHHHHHHHHHHHHhhCCHH--------HHH-HHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHH
Confidence 99999999988888887777643 222 2344333333322110 1222223333445556666
Q ss_pred hhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 022127 225 FSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 272 (302)
Q Consensus 225 ~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g 272 (302)
....+....+.+..| +++|+.+++.+++.++|..+++.++|.+.++.|
T Consensus 367 ~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 367 LKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 777777888888888 889999999999999999999999999988765
No 109
>PRK11462 putative transporter; Provisional
Probab=99.66 E-value=6.4e-14 Score=119.52 Aligned_cols=241 Identities=13% Similarity=0.047 Sum_probs=145.8
Q ss_pred hhhhcccC-ccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhc-------CCchHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 022127 6 TLTSRWFP-SHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-------GISGPFILFSSLGLLWLSTWTSKVTNDPCNS 77 (302)
Q Consensus 6 ~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-------gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~ 77 (302)
++..|..+ ++||++..++...+..+|..+++.+...+.+.. +|+....+.+++.++...+.+...+|+++++
T Consensus 132 al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~ 211 (460)
T PRK11462 132 ALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAP 211 (460)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCC
Confidence 56667776 689999999999999999988888776665543 5777777777766666555555455543221
Q ss_pred CCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHH
Q 022127 78 PFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPW 157 (302)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~ 157 (302)
+. +. +.+...+..++||.++.+....++..............|.+...|. +...+.+.....
T Consensus 212 ~~-~~----------------~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~ 273 (460)
T PRK11462 212 PT-TT----------------SMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYC 273 (460)
T ss_pred cc-CC----------------CHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHH
Confidence 10 00 0112466788899888776666666555555444455555554443 334455666777
Q ss_pred HHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhccc-chHHHHHHHHHHHHHhhhhhhhhhhHHhh
Q 022127 158 GTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK-SPAVAAVLITIALSLSSFSQAGYLLNIQE 236 (302)
Q Consensus 158 ~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (302)
++++++.+++++++||+++|+. .. .................. +........++.+.+.+...+..+++..|
T Consensus 274 i~~iig~~l~~~l~~r~gkk~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad 345 (460)
T PRK11462 274 VGNLIGSALAKPLTDWKCKVTI-------FW-WTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSD 345 (460)
T ss_pred HHHHHHHHHHHHHHHHhChHHH-------HH-HHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999987632 11 111111111222111122 22222223333333344444444566665
Q ss_pred hcc--------chhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 022127 237 IAP--------DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 272 (302)
Q Consensus 237 ~~p--------~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g 272 (302)
..+ +..|...+.......+|.++++.+.|.+.+..|
T Consensus 346 ~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~G 389 (460)
T PRK11462 346 TVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGG 389 (460)
T ss_pred hHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 544 124566677788999999999999999886543
No 110
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.66 E-value=7.1e-15 Score=125.77 Aligned_cols=176 Identities=10% Similarity=0.042 Sum_probs=137.3
Q ss_pred cCc-cHHHHHHHHHhhhHHHHHHHhhhhHHHHHh--hccchhhhhHHhhHHHHHHHhhhhhhhcccch-hhccCCchhHH
Q 022127 109 SKL-PSWTVIIANITNNWGYFVLLSWMPIYFNTV--FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDS-LIKAGYSLTLV 184 (302)
Q Consensus 109 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~ 184 (302)
++| .++.+.+..++...+++....++|.|+++. +|++..+++...+....+..++.+++|+++|| +|+|+
T Consensus 7 ~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~------ 80 (475)
T TIGR00924 7 GHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKK------ 80 (475)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHH------
Confidence 444 456677777777889999999999999987 89999999999999999999999999999999 78753
Q ss_pred HHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-c---hhhhHHHHHHHHHHHHHHHH
Q 022127 185 RKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-D---CAGFLHGIANSAGTLAAIIS 260 (302)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~---~~~~~~g~~~~~~~~g~~i~ 260 (302)
.+..+..+..++...+...++.+.......+.+.+.+...+...+...+..| + +|+++.++.+...++|..++
T Consensus 81 ---~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig 157 (475)
T TIGR00924 81 ---TMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFIS 157 (475)
T ss_pred ---HHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHH
Confidence 2235555666666666665555444444445555566666777788888776 3 38889999999999999999
Q ss_pred HHHhhhhhccccchhHHHHHHHHHHHHHHHHHHh
Q 022127 261 TIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNL 294 (302)
Q Consensus 261 ~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 294 (302)
|.+.+++.++.| |+..|.+.++..+++.+.+..
T Consensus 158 ~~l~g~l~~~~g-~~~~f~~~~~~~~~~~l~~~~ 190 (475)
T TIGR00924 158 PLLAGVIAENYG-YHVGFNLAAVGMVIGLLTFFA 190 (475)
T ss_pred HHHHHHHHHhcC-hHHHHHHHHHHHHHHHHHHHH
Confidence 999999999876 999999888766666555444
No 111
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.65 E-value=8.1e-14 Score=119.99 Aligned_cols=285 Identities=15% Similarity=0.092 Sum_probs=159.2
Q ss_pred chhhhhhhcccCccc--hhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHH---HHHHhhhcCCCCC
Q 022127 2 PAMSTLTSRWFPSHE--RASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWL---STWTSKVTNDPCN 76 (302)
Q Consensus 2 p~~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~---~~~~~~~~~~p~~ 76 (302)
|...+++.|++|+++ |+.++++++.+.++|..++|.+++++.+++|||+.|.+.++..++.. +.....++|.+++
T Consensus 131 ~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~ 210 (500)
T PRK09584 131 ANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSK 210 (500)
T ss_pred CCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCC
Confidence 566788999998654 45688999999999999999999999999999999999775443322 2223334443211
Q ss_pred CCCCChHHHHHH----------------HhcCccccc-------------CCCCcchHHhhcCccHHHHHHHHHhhhHHH
Q 022127 77 SPFVSKSELRLI----------------QAGKSDSVK-------------KRNPPSLRHLLSKLPSWTVIIANITNNWGY 127 (302)
Q Consensus 77 ~~~~~~~~~~~~----------------~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (302)
.+..+.+..... ..+.+..+. .......++.-+ ++.+.. +..+.....+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~i~f 288 (500)
T PRK09584 211 PDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFAMKGAAR-RKMIVA-FILMLEAIIF 288 (500)
T ss_pred CCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhcCHHHH-HHHHHH-HHHHHHHHHH
Confidence 111000000000 000000000 000000011111 222222 2233444455
Q ss_pred HHHHhhhhHHHHH--hhccch------hhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHH
Q 022127 128 FVLLSWMPIYFNT--VFNVNL------KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVS 199 (302)
Q Consensus 128 ~~~~~~~~~~~~~--~~g~s~------~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (302)
+......|.++.. ..+.+. ...+.+.+...+..++..++.+++-+|.++|... .++. .+++++.+++
T Consensus 289 ~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~---~~~~--~~G~~l~~l~ 363 (500)
T PRK09584 289 FVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPM---PHKF--AIGMVLCSGA 363 (500)
T ss_pred HHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCc---HHHH--HHHHHHHHHH
Confidence 5555556665443 111221 2245566667767777777776666666655322 1222 3666666666
Q ss_pred HHHhhccc---------chHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhc
Q 022127 200 LLCLNYAK---------SPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ 269 (302)
Q Consensus 200 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~ 269 (302)
...+.... +.++.+....+.+.+..+..|.....+.+..| +.||+.+|+......+|..++..+.+....
T Consensus 364 f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~ 443 (500)
T PRK09584 364 FLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAV 443 (500)
T ss_pred HHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 55543322 23445556666677777788888888989888 789999998877777777776666643211
Q ss_pred ---------cccchhHHHHHHHHHHHHHHHHHH
Q 022127 270 ---------WLGSFQAFLTVTAGLYFVTTIFWN 293 (302)
Q Consensus 270 ---------~~g~~~~~~~~~~~~~~~~~~~~~ 293 (302)
..+.+...|...++..++..++.+
T Consensus 444 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~ 476 (500)
T PRK09584 444 PDNVTDPLMSLEVYGRVFLQIGIATAVIAVLML 476 (500)
T ss_pred ccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 112266777777766554444333
No 112
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.65 E-value=7e-20 Score=156.43 Aligned_cols=285 Identities=15% Similarity=0.119 Sum_probs=172.3
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhh---cCCchHHHHHHHHHHHHHHHHHhhhcCCCCCC-
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST---IGISGPFILFSSLGLLWLSTWTSKVTNDPCNS- 77 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~- 77 (302)
+....++.|..|+++|++..++.+....+|..++..++..+.+. .+||..+...++++++..+ ...++||+|+--
T Consensus 121 ~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pESP~wL~ 199 (451)
T PF00083_consen 121 VVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLL-LRFFLPESPRWLL 199 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccceec
Confidence 45678899999999999999999999999999998887655443 3599999998887776554 445689998721
Q ss_pred --CCCChHHHHHH--------HhcCccc-----ccCCCCcchHHhhcCcc----HHHHHHHHHhhhH-HHHHHHhhhhHH
Q 022127 78 --PFVSKSELRLI--------QAGKSDS-----VKKRNPPSLRHLLSKLP----SWTVIIANITNNW-GYFVLLSWMPIY 137 (302)
Q Consensus 78 --~~~~~~~~~~~--------~~~~~~~-----~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~ 137 (302)
++.++.++... +++.+++ +.++.+..++++++++. ............. +......+.|.+
T Consensus 200 ~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i 279 (451)
T PF00083_consen 200 SKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSI 279 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccc
Confidence 11111110000 0000000 11111134667777643 2232333333322 333444555655
Q ss_pred HHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhh-----cccc----
Q 022127 138 FNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLN-----YAKS---- 208 (302)
Q Consensus 138 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---- 208 (302)
+++ .+.+.. -.......+...++.+.+..+.||+|||+... .+.....++...+. ..++
T Consensus 280 ~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (451)
T PF00083_consen 280 FEN-AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLI---------IGLLLMAICSLILGIIFFLGVSSSSWW 347 (451)
T ss_pred ccc-cccccc--cccccccccccccccccccccccccccccccc---------ccccccccccccccccccccccccccc
Confidence 555 666655 22333445667777788889999999885432 33333333333221 1112
Q ss_pred hHHHHHHHHHHHHHhh-hhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHH
Q 022127 209 PAVAAVLITIALSLSS-FSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYF 286 (302)
Q Consensus 209 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~ 286 (302)
....+....+.....+ ...+..+.+..|.+| +.|+++.|+....++++++++|.+...+.+..+ ....+.+.+++++
T Consensus 348 ~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~-~~~~~~i~~~~~~ 426 (451)
T PF00083_consen 348 SILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG-GWGVFLIFAGVCL 426 (451)
T ss_pred ccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccchhhHHHHH
Confidence 1122222222222223 223444577799999 899999999999999999999999998888765 3456666666666
Q ss_pred HHHHHHHhhccCcc
Q 022127 287 VTTIFWNLYSTGER 300 (302)
Q Consensus 287 ~~~~~~~~~~~~~~ 300 (302)
+..+....+.+|+|
T Consensus 427 i~~i~~~~~lpET~ 440 (451)
T PF00083_consen 427 IAIIFVYFFLPETK 440 (451)
T ss_pred HHHhheeEEEeeCC
Confidence 66666666666554
No 113
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.64 E-value=3.1e-14 Score=123.29 Aligned_cols=284 Identities=13% Similarity=0.071 Sum_probs=171.1
Q ss_pred hhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhh-cCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCC-CC
Q 022127 4 MSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST-IGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPF-VS 81 (302)
Q Consensus 4 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~ 81 (302)
...+++|..|++.||...+..+....+|..++..++....+. .+||..+.+..+.+++..+. .+++||+|+.--+ .+
T Consensus 163 ~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~ 241 (513)
T KOG0254|consen 163 APVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGR 241 (513)
T ss_pred chhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCC
Confidence 456889999999999999999999999999996555444332 48999999988888887777 7778999872111 01
Q ss_pred h-------------------HHHHHHHhcCccc-ccCCCCcchHHhhc----CccHHHHHHHHHhhhHHHHHHHhhhhHH
Q 022127 82 K-------------------SELRLIQAGKSDS-VKKRNPPSLRHLLS----KLPSWTVIIANITNNWGYFVLLSWMPIY 137 (302)
Q Consensus 82 ~-------------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (302)
. .+.+........+ ...+.+..++++++ ++.+....+..+.+..+......|.+.+
T Consensus 242 ~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~i 321 (513)
T KOG0254|consen 242 LEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTI 321 (513)
T ss_pred hHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHH
Confidence 1 1111111000000 00111112444443 2234455555666665666677888888
Q ss_pred HHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcc-----------
Q 022127 138 FNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA----------- 206 (302)
Q Consensus 138 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 206 (302)
+++ .|.+... .......++...++..+...+.||+|||+.. ..+.....++.+++...
T Consensus 322 f~~-~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~ll---------l~s~~~m~~~~~~~~~~~~~~~~~~~~~ 390 (513)
T KOG0254|consen 322 FKS-AGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLL---------LFGAAGMSICLVILAVVGVFALYYPNSS 390 (513)
T ss_pred HHh-cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHH---------HHhHHHHHHHHHHHHHHHHHhccCCCcc
Confidence 777 5665433 4455566777888888889999999976432 23333333333222210
Q ss_pred -cchHHHHHHHHHHHHHhhh-hhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHH
Q 022127 207 -KSPAVAAVLITIALSLSSF-SQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAG 283 (302)
Q Consensus 207 -~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~ 283 (302)
...+..+...++....... ..+..+....|.+| +.|+++.++........+.+-......+.+..+ ....|.....
T Consensus 391 ~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~-~~~~f~~f~~ 469 (513)
T KOG0254|consen 391 KGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALG-IGGTFGYFGG 469 (513)
T ss_pred cchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchHHHHHH
Confidence 1122333333333333333 33444667799999 899999999999999888776666666555433 3445555555
Q ss_pred HHHHHHH-HHHhhccCcc
Q 022127 284 LYFVTTI-FWNLYSTGER 300 (302)
Q Consensus 284 ~~~~~~~-~~~~~~~~~~ 300 (302)
...+... ..+++.+++|
T Consensus 470 ~~~~~~~~fv~~~~pETk 487 (513)
T KOG0254|consen 470 ICLLSLIIFVFFFVPETK 487 (513)
T ss_pred HHHHHHHHHheEEcccCC
Confidence 5555555 4555555544
No 114
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.64 E-value=3.8e-14 Score=121.99 Aligned_cols=178 Identities=9% Similarity=0.076 Sum_probs=129.2
Q ss_pred HHhhcCcc-HHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccch-hhccCCchh
Q 022127 105 RHLLSKLP-SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDS-LIKAGYSLT 182 (302)
Q Consensus 105 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~ 182 (302)
.+.+++|+ ++......++...+++....+++.|+++++|+|..+++...+..........+++|+++|| +|+|+.
T Consensus 14 ~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~--- 90 (500)
T PRK09584 14 LNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRV--- 90 (500)
T ss_pred hhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHH---
Confidence 45567774 8888888889999999999999999998899999988887776665555556789999999 587532
Q ss_pred HHHHHHHHHhhhhhHHHHHHhhccc-chHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-ch--hhhHHHHHHHHHHHHHH
Q 022127 183 LVRKIMQSIGFIGPGVSLLCLNYAK-SPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DC--AGFLHGIANSAGTLAAI 258 (302)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~--~~~~~g~~~~~~~~g~~ 258 (302)
...+.++..++.......+ +.........+.+.+.+...+...+...+.+| ++ +..+.++.+...++|..
T Consensus 91 ------~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~ 164 (500)
T PRK09584 91 ------IMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSF 164 (500)
T ss_pred ------HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHH
Confidence 2344445455544444433 23333333344455566666676778888776 32 45678888999999999
Q ss_pred HHHHHhhhhhccccchhHHHHHHHHHHHHHHHHH
Q 022127 259 ISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFW 292 (302)
Q Consensus 259 i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 292 (302)
++|.+.|++.|+.| |+..|.+.++..+++.+.+
T Consensus 165 ~gp~i~g~l~~~~g-~~~~F~i~~i~~~i~~i~~ 197 (500)
T PRK09584 165 FSMLATPWLAAKYG-WSVAFALSVVGMLITVVNF 197 (500)
T ss_pred HHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHH
Confidence 99999999999886 9999998876666555443
No 115
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.64 E-value=3.6e-14 Score=119.18 Aligned_cols=171 Identities=12% Similarity=0.131 Sum_probs=133.2
Q ss_pred HHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhh
Q 022127 114 WTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGF 193 (302)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 193 (302)
+.+....++...+.+....++|.|++++.|+|+.+.|+..+...+...+.+++.|+++||+++|+. ...+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~---------l~~~~ 83 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPM---------IVTGM 83 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHH---------HHHHH
Confidence 455677777788888888999999988899999999999999999999999999999999997632 23555
Q ss_pred hhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 022127 194 IGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 272 (302)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g 272 (302)
....+........++.+.......+.+...+...+...+...+..| ++|+++.|+.+...++|..+||.+.+.+. ..|
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g 162 (400)
T PRK11646 84 LMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYD 162 (400)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh
Confidence 5555555555556666655555555555555566677777888776 89999999999999999999999999998 455
Q ss_pred chhHHHHHHHHHHHHHHHHHHhh
Q 022127 273 SFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
|+..|++.+...++..++....
T Consensus 163 -~~~~f~~~~~~~~~~~i~~~~~ 184 (400)
T PRK11646 163 -FRLVCATGAVLFVLAAAFNAWL 184 (400)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999988877766655444333
No 116
>PTZ00207 hypothetical protein; Provisional
Probab=99.63 E-value=6.6e-14 Score=120.51 Aligned_cols=296 Identities=14% Similarity=0.037 Sum_probs=199.0
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCC---
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSP--- 78 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~--- 78 (302)
+++...+.+|+| ++||++.|+...+.++|.++.+.+...+.+ .+|+..|++.+++++++.++...++++.|....
T Consensus 139 ~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~ 216 (591)
T PTZ00207 139 LGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQ 216 (591)
T ss_pred HHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhccc
Confidence 355677899997 678999999999999999864444443333 478899999999999988887777766553211
Q ss_pred --CCChHHHH-----------------H---------------------------------------H------H-----
Q 022127 79 --FVSKSELR-----------------L---------------------------------------I------Q----- 89 (302)
Q Consensus 79 --~~~~~~~~-----------------~---------------------------------------~------~----- 89 (302)
..+++|+. . . .
T Consensus 217 ~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip 296 (591)
T PTZ00207 217 EKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFP 296 (591)
T ss_pred ccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 11222222 0 0 0
Q ss_pred ---------h-cCcc---------------cc-------c---CCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhh
Q 022127 90 ---------A-GKSD---------------SV-------K---KRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWM 134 (302)
Q Consensus 90 ---------~-~~~~---------------~~-------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (302)
+ +.+. +. + .+...+.++.+++.++|.+.+..++...........+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~ 376 (591)
T PTZ00207 297 LTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNA 376 (591)
T ss_pred HHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecH
Confidence 0 0000 00 0 0011256677888999999999999988888888888
Q ss_pred hHHHHHhhccchhh--hhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHH
Q 022127 135 PIYFNTVFNVNLKQ--AAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVA 212 (302)
Q Consensus 135 ~~~~~~~~g~s~~~--~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (302)
.++.+..-|.+.++ ...+.++.++++.+|++..|.++....+|+......|...+.+..+ ..++.+++.........
T Consensus 377 ~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L 455 (591)
T PTZ00207 377 RFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAAL 455 (591)
T ss_pred HHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHh
Confidence 88888832763333 3337789999999999999999844444331100124444445554 33333333332221345
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHH-HHHhhhhhcccc------------chhHHHH
Q 022127 213 AVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIIS-TIGTGYFVQWLG------------SFQAFLT 279 (302)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~-~~i~g~l~~~~g------------~~~~~~~ 279 (302)
.+...+.+++.|..++......+|++.|+-|+-+-+.....-+|+.+- -.+.|.++|+-. -++..|+
T Consensus 456 ~~~~~lvg~~~G~~~~~~~~i~selFgk~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~ 535 (591)
T PTZ00207 456 PLPYFIAAFANGFMAATIALVTRTIFAKDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLA 535 (591)
T ss_pred HHHHHHHHHHhhHhHHHHHHHHHHHhccchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHH
Confidence 666677778889999999999999998999998888888888887765 568888887521 2778999
Q ss_pred HHHHHHHHHHHHHHhhccCcc
Q 022127 280 VTAGLYFVTTIFWNLYSTGER 300 (302)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~ 300 (302)
+.+++++++.+...++..+.|
T Consensus 536 v~~~~~~~g~~~s~~l~~R~r 556 (591)
T PTZ00207 536 FLLGLSFLAFITSTYVHLQYR 556 (591)
T ss_pred HHHHHHHHHHHHHhheeeehH
Confidence 999999999888766654433
No 117
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.62 E-value=2.6e-14 Score=120.93 Aligned_cols=182 Identities=16% Similarity=0.068 Sum_probs=133.4
Q ss_pred chHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchh
Q 022127 103 SLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLT 182 (302)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 182 (302)
+++.+.|+|.++......++............|.+.++ .+.++.+.|+..+...++..+++++.|+++||++||+...
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~- 86 (417)
T PRK10489 9 DLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQM-MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLIL- 86 (417)
T ss_pred HHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEE-
Confidence 45556678888888888888887877778888988877 6779999999999999999999999999999999987542
Q ss_pred HHHHHHHHHhhhhhHHHHHHh-----hcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHH
Q 022127 183 LVRKIMQSIGFIGPGVSLLCL-----NYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLA 256 (302)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g 256 (302)
.+..+.+++.... ...++.+.......+.+.+.+...+.......+..| ++++++.++.+...++|
T Consensus 87 --------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 158 (417)
T PRK10489 87 --------LARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLG 158 (417)
T ss_pred --------ehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHH
Confidence 1222222221111 112344444444444445555555666777778776 78999999999999999
Q ss_pred HHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhh
Q 022127 257 AIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 257 ~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
..+||.+.+.+.+..+ |++.+.+.++..++..+.....
T Consensus 159 ~~~g~~l~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~l 196 (417)
T PRK10489 159 SVISPALGGLLIAAGG-VAWNYGLAAAGTFITLLPLLRL 196 (417)
T ss_pred HHhHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999988765 8888888777766665554444
No 118
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.61 E-value=5e-14 Score=119.23 Aligned_cols=174 Identities=11% Similarity=0.130 Sum_probs=129.9
Q ss_pred ccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchh-hccCCchhHHHHHHH
Q 022127 111 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSL-IKAGYSLTLVRKIMQ 189 (302)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~~~~~~~~~~~ 189 (302)
+.++......+...+.++++..++|.|+++.+|+++.+++...........++.+++|+++||+ |||+. +
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~--------i- 79 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMA--------V- 79 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHH--------H-
Confidence 4566777777888889999999999999988999999999999999999999999999999999 87632 2
Q ss_pred HHhhhhhHHHHHHhhccc-chHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-c--hhhhHHHHHHHHHHHHHHHHHHHhh
Q 022127 190 SIGFIGPGVSLLCLNYAK-SPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-D--CAGFLHGIANSAGTLAAIISTIGTG 265 (302)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~--~~~~~~g~~~~~~~~g~~i~~~i~g 265 (302)
..+.++..++...+...+ +.........+...+.+...+...+...|.+| + +|.++.++.+...++|+.++|.+.+
T Consensus 80 liG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g 159 (493)
T PRK15462 80 MLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACG 159 (493)
T ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHH
Confidence 244444444443433322 11222222223334445555666778888887 3 5899999999999999999999999
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHHh
Q 022127 266 YFVQWLGSFQAFLTVTAGLYFVTTIFWNL 294 (302)
Q Consensus 266 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 294 (302)
++.+..| |+..|.+.++..+++.+.+..
T Consensus 160 ~L~~~~G-w~~~F~iaaigm~l~li~~~~ 187 (493)
T PRK15462 160 YAQEEYS-WAMGFGLAAVGMIAGLVIFLC 187 (493)
T ss_pred HHHhhhC-hHHHHHHHHHHHHHHHHHHHH
Confidence 9998876 999999887766666655543
No 119
>PRK10504 putative transporter; Provisional
Probab=99.61 E-value=9.7e-14 Score=119.36 Aligned_cols=174 Identities=9% Similarity=0.018 Sum_probs=135.7
Q ss_pred ccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHH
Q 022127 111 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS 190 (302)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 190 (302)
+.+|.+.+..++..........++|.+.++ +|.|+.+.++..+...++..++.++.|+++||+|||+.. .
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~---------~ 79 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIF---------F 79 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH---------H
Confidence 356777888888887888888999999887 899999999999998999999999999999999986322 2
Q ss_pred HhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhc
Q 022127 191 IGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ 269 (302)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~ 269 (302)
.+..+..++.......++.+.......+.+.+.+...+.......|..| ++++++.|+.+...++|..++|.+.|.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~ 159 (471)
T PRK10504 80 TAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVE 159 (471)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh
Confidence 3333444444444455566655666666666666666777777888887 789999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHhh
Q 022127 270 WLGSFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 270 ~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
+.| |+..|.+......++.+.....
T Consensus 160 ~~g-w~~~f~~~~~~~~l~~~~~~~~ 184 (471)
T PRK10504 160 YAS-WHWIFLINIPVGIIGAIATLML 184 (471)
T ss_pred hcc-HHHHHHHHHHHHHHHHHHHHHh
Confidence 876 9999998877766666555444
No 120
>PRK03545 putative arabinose transporter; Provisional
Probab=99.60 E-value=1.1e-13 Score=116.17 Aligned_cols=171 Identities=12% Similarity=-0.012 Sum_probs=127.1
Q ss_pred HHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHh
Q 022127 113 SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIG 192 (302)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 192 (302)
++.+.+..+......+.....+|.+.++ +|.|+.+.++..+...++..++.+..|.+.||+|||+. +..+
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~---------~~~~ 80 (390)
T PRK03545 11 VVTLALAAFIFNTTEFVPVGLLSDIAQS-FHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKL---------LIGL 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHcchHHHHhH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHH---------HHHH
Confidence 3444444444333333344456766555 99999999999999999999999999999999997632 2355
Q ss_pred hhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 022127 193 FIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWL 271 (302)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~ 271 (302)
.....++.......++.+...+...+.+...+...+...+...+..| ++|+++.|+.....++|..++|.+.+.+.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~ 160 (390)
T PRK03545 81 FVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL 160 (390)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh
Confidence 55556666666667777766666555555555556667778888877 88999999999999999999999999998887
Q ss_pred cchhHHHHHHHHHHHHHHHHHHh
Q 022127 272 GSFQAFLTVTAGLYFVTTIFWNL 294 (302)
Q Consensus 272 g~~~~~~~~~~~~~~~~~~~~~~ 294 (302)
| |+..|.+.+++.++..+....
T Consensus 161 g-w~~~f~~~~~~~~l~~~~~~~ 182 (390)
T PRK03545 161 G-WRTTFLAIGGGALITLLLLIK 182 (390)
T ss_pred c-HHHHHHHHHHHHHHHHHHHHH
Confidence 6 999999988877766555444
No 121
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.59 E-value=2.7e-15 Score=121.33 Aligned_cols=284 Identities=15% Similarity=0.165 Sum_probs=187.7
Q ss_pred CchhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhc---------------CCchHHHHHHHHHHHHHHH
Q 022127 1 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI---------------GISGPFILFSSLGLLWLST 65 (302)
Q Consensus 1 ~p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---------------gwr~~f~~~~~~~~~~~~~ 65 (302)
||.+.++.+|...+++||...+...+..+.|...|.+++-.+..-+ -||..|.+..++++. .+.
T Consensus 162 YPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~-~ly 240 (538)
T KOG0252|consen 162 YPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALL-VLY 240 (538)
T ss_pred CcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHH-HHH
Confidence 7899999999999999999999999999999999888876665321 399999986665555 445
Q ss_pred HHhhhcCCCCCCCCCChHHH-------HHHHhcCc-----ccccCCCC---cchHHhhcC---ccHHHHHHHHHhhhHHH
Q 022127 66 WTSKVTNDPCNSPFVSKSEL-------RLIQAGKS-----DSVKKRNP---PSLRHLLSK---LPSWTVIIANITNNWGY 127 (302)
Q Consensus 66 ~~~~~~~~p~~~~~~~~~~~-------~~~~~~~~-----~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~ 127 (302)
....+||+++.....+.+.+ +....+.+ ++..+..+ ..+...+.. +.+......+|....++
T Consensus 241 ~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiaf 320 (538)
T KOG0252|consen 241 FRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAF 320 (538)
T ss_pred hhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 55557887653311110000 00000000 00001111 112222222 56677788899999999
Q ss_pred HHHHhhhhHHHHHhhccchhhhhH--------Hhh-HHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHH
Q 022127 128 FVLLSWMPIYFNTVFNVNLKQAAW--------FSA-VPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGV 198 (302)
Q Consensus 128 ~~~~~~~~~~~~~~~g~s~~~~~~--------~~~-~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (302)
|....+....+++ .|+.+.+... ... +...+.+.|-.+...++|++||++ ....++.+..+
T Consensus 321 y~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~---------iq~~GF~~~~i 390 (538)
T KOG0252|consen 321 YGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKY---------IQLMGFFIMTI 390 (538)
T ss_pred hccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHH---------HHHhhHHHHHH
Confidence 9999888888886 5665544333 111 222333446677788999999653 33466666666
Q ss_pred HHHHhhcccc----hHHHHHHHHHHHHHhhhhh-hhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhc---
Q 022127 199 SLLCLNYAKS----PAVAAVLITIALSLSSFSQ-AGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ--- 269 (302)
Q Consensus 199 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~--- 269 (302)
..+.+....+ .....++..+..++..+.. ........|.+| +.|++..|+....+..|++++.....++.+
T Consensus 391 ~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~y 470 (538)
T KOG0252|consen 391 FFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNY 470 (538)
T ss_pred HHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccC
Confidence 6666555433 2223344444444444432 233566689999 899999999999999999999999999998
Q ss_pred --cccchhHHHHHHHHHHHHHHHHHHhhc
Q 022127 270 --WLGSFQAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 270 --~~g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
..| .+.++++.+++.+++.+..+++.
T Consensus 471 p~~~g-~~~v~~i~~~~~~~gi~~T~l~p 498 (538)
T KOG0252|consen 471 PPNIG-VRNVFIILAGCMLLGILFTLLIP 498 (538)
T ss_pred Ccccc-chHHHHHHHHHHHHhHheeEEee
Confidence 555 88999999999999988877776
No 122
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.59 E-value=1.1e-13 Score=114.98 Aligned_cols=170 Identities=14% Similarity=0.077 Sum_probs=128.9
Q ss_pred HHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhh
Q 022127 115 TVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFI 194 (302)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 194 (302)
.+....+............+|.|..+ .+.++.+.++..+...++..++.++.|+++||+|||+.. ..+..
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~---------~~~~~ 72 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVM---------IGADL 72 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHH---------HHHHH
Confidence 34556666666777777888888887 789999999999999999999999999999999976322 23333
Q ss_pred hhHHHHHHhhccc-----chHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 022127 195 GPGVSLLCLNYAK-----SPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFV 268 (302)
Q Consensus 195 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~ 268 (302)
+..++.......+ +.+.......+.+.+.+...+...+...|..| ++|++..|..+....+|..++|.+.+.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 152 (365)
T TIGR00900 73 IRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMY 152 (365)
T ss_pred HHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333332222 55555666666666777777888888899888 88999999999999999999999999999
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHhh
Q 022127 269 QWLGSFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 269 ~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
+..| |+..+.+.++..+++.+.....
T Consensus 153 ~~~g-~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 153 ATLG-IKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred HHhh-HHHHHHHHHHHHHHHHHHHHhc
Confidence 8876 9998888777666665544443
No 123
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.59 E-value=1.6e-12 Score=113.13 Aligned_cols=250 Identities=12% Similarity=-0.003 Sum_probs=155.4
Q ss_pred hhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCC---CC
Q 022127 3 AMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNS---PF 79 (302)
Q Consensus 3 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~---~~ 79 (302)
....++.|++++++|+.+..+ ......++.+++..++++.+ +||+.+++..++..+..+. +++.||+|+-. .+
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g~ 266 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKGR 266 (521)
T ss_pred HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcCc
Confidence 456788999999999999999 88888888888888888877 9999999999888876655 55566888621 11
Q ss_pred CChHHHH--HHHh----cCcc--------------cccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHH
Q 022127 80 VSKSELR--LIQA----GKSD--------------SVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFN 139 (302)
Q Consensus 80 ~~~~~~~--~~~~----~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (302)
.++.++. ...+ ..+. ....+++..+.++++.|++....+...+.... +....+.-.+..
T Consensus 267 ~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~-~~~~y~gl~~~~ 345 (521)
T KOG0255|consen 267 IDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFV-FSLVYYGLSLNV 345 (521)
T ss_pred hHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHH-HhHHHHhhhhhh
Confidence 1111100 0000 0000 01111224567788887544333333322211 122222222222
Q ss_pred HhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccch---HHHHHHH
Q 022127 140 TVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSP---AVAAVLI 216 (302)
Q Consensus 140 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 216 (302)
+.+|.+.. ......+..........+...|+.||| .....+.....++++........ +......
T Consensus 346 ~~lg~~~~---~~~~~~~~~~~p~~~~~~~~~~~~gR~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (521)
T KOG0255|consen 346 SGLGGNIY---LNFTLSGLVELPAYFRNGLLLPEFGRR---------PPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILP 413 (521)
T ss_pred hhcCchHH---HHHHHHHHHHhhHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Confidence 22444432 222333335666666668888999754 33345555556665555544322 2355666
Q ss_pred HHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhc
Q 022127 217 TIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ 269 (302)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~ 269 (302)
.++.++.+......+....|..| ..|+.+.+..+....++++++|.+.-....
T Consensus 414 ~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 414 LLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 66667777777777888999999 889999999999999999999998865544
No 124
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.59 E-value=1.9e-13 Score=114.31 Aligned_cols=172 Identities=8% Similarity=-0.095 Sum_probs=135.8
Q ss_pred ccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHH
Q 022127 111 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS 190 (302)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 190 (302)
+.++...+..+............+|.+.++ +|.|..+.++..+...++..++.+..|++.||+|+|+. ..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~---------~~ 72 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHI---------LL 72 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHH---------HH
Confidence 456677777777777777888888887766 89999999999999999999999999999999997632 23
Q ss_pred HhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhc
Q 022127 191 IGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ 269 (302)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~ 269 (302)
.+..+.+++.+.....++.+...+...+.+.+.+...+.......+..| ++|+++.+.......++..++|.+.+.+.+
T Consensus 73 ~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~ 152 (382)
T PRK10091 73 FLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ 152 (382)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh
Confidence 5555566666666777777776666666666666555666667778777 678999999999999999999999999988
Q ss_pred cccchhHHHHHHHHHHHHHHHHHH
Q 022127 270 WLGSFQAFLTVTAGLYFVTTIFWN 293 (302)
Q Consensus 270 ~~g~~~~~~~~~~~~~~~~~~~~~ 293 (302)
..+ |+..|.+.++..++..+...
T Consensus 153 ~~g-wr~~f~~~~~~~~~~~~~~~ 175 (382)
T PRK10091 153 EFS-WRYTFLLIAVFNIAVLASIY 175 (382)
T ss_pred hcc-HHHHHHHHHHHHHHHHHHHH
Confidence 776 99999988877666555433
No 125
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.59 E-value=3.3e-13 Score=113.18 Aligned_cols=155 Identities=10% Similarity=-0.022 Sum_probs=122.2
Q ss_pred HHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc
Q 022127 126 GYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY 205 (302)
Q Consensus 126 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (302)
..+.....+|.+.++ +|.++.+.+...+...++..++.++.|++.||+|||+. +..+..+..++......
T Consensus 35 ~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~---------~~~~~~~~~~~~~~~~~ 104 (394)
T PRK10213 35 VEFLPVSLLTPMAQD-LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYV---------VILFAVLLTLSCLLVSF 104 (394)
T ss_pred HHHHHHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHH---------HHHHHHHHHHHHHHHHH
Confidence 333444567777666 89999999999999999999999999999999997632 23455555555555556
Q ss_pred ccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHH
Q 022127 206 AKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGL 284 (302)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~ 284 (302)
.++.+.......+.+...+...+.......|..| ++|+++.+......+++..++|.+.+.+.+..| |+..|++.+++
T Consensus 105 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~g-w~~~f~~~~~l 183 (394)
T PRK10213 105 ANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIG-WRNVFNAAAVM 183 (394)
T ss_pred HChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-HHHHHHHHHHH
Confidence 6677777776677777777777788888888887 889999999999999999999999999999886 99999888766
Q ss_pred HHHHHHH
Q 022127 285 YFVTTIF 291 (302)
Q Consensus 285 ~~~~~~~ 291 (302)
.++..+.
T Consensus 184 ~~~~~l~ 190 (394)
T PRK10213 184 GVLCIFW 190 (394)
T ss_pred HHHHHHH
Confidence 6654443
No 126
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.59 E-value=2e-13 Score=115.14 Aligned_cols=173 Identities=9% Similarity=-0.013 Sum_probs=129.4
Q ss_pred HHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhh
Q 022127 114 WTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGF 193 (302)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 193 (302)
....+.+++.+..........| .+++++|.|..+.++..+...++..++.+..|++.||+|+|+ ....+.
T Consensus 11 ~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~---------~~~~~~ 80 (412)
T TIGR02332 11 IFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARR---------WIAGIM 80 (412)
T ss_pred HHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHH---------HHHHHH
Confidence 3444444544555555556666 566669999999999999999999999999999999999763 223556
Q ss_pred hhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhcc--
Q 022127 194 IGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQW-- 270 (302)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~-- 270 (302)
++..++.......++.+.....-.+.+.+.+...+.......|..| ++|+++.|+.+....+|..+++.+.+++.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 160 (412)
T TIGR02332 81 VLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDG 160 (412)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5666666666666777666666666666666666777777888888 7899999999999999999999999988742
Q ss_pred ----ccchhHHHHHHHHHHHHHHHHHHhhcc
Q 022127 271 ----LGSFQAFLTVTAGLYFVTTIFWNLYST 297 (302)
Q Consensus 271 ----~g~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (302)
. +|+..|.+.++..++..++..++.+
T Consensus 161 ~~~~~-gwr~~f~~~~~~~l~~~~~~~~~~~ 190 (412)
T TIGR02332 161 LMALK-GWQWLFLLEGFPSVILGVMTWFWLD 190 (412)
T ss_pred CCCcc-chhHHHHHHHHHHHHHHHHHhhccC
Confidence 3 4999999987776665554444433
No 127
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.58 E-value=1.7e-14 Score=116.69 Aligned_cols=272 Identities=17% Similarity=0.145 Sum_probs=175.5
Q ss_pred hhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhh------cCCch--HHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 022127 6 TLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST------IGISG--PFILFSSLGLLWLSTWTSKVTNDPCNS 77 (302)
Q Consensus 6 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~------~gwr~--~f~~~~~~~~~~~~~~~~~~~~~p~~~ 77 (302)
.+..-|||++||+.+..+-.++..+|.+++.++...+..+ ..|.. .|+..++++.+..++..+..++.|+..
T Consensus 163 kiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tP 242 (480)
T KOG2563|consen 163 KIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTP 242 (480)
T ss_pred HHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 5567899999999999999999999999999988887653 34654 355555555555555555555655544
Q ss_pred CCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHH
Q 022127 78 PFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPW 157 (302)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~ 157 (302)
+.......+ ..+...+.++.++|+++..+.+.+......+++..+.+-.-+.. .|++...+|+......
T Consensus 243 ps~s~~~~~----------~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~i 311 (480)
T KOG2563|consen 243 PSASQAALQ----------DASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMI 311 (480)
T ss_pred CchhHhhhh----------cCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHH
Confidence 332222111 01134468899999999999999988888888877776655554 5777788999999999
Q ss_pred HHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHH-HHHhhccc---chHHHHHHHHHHHHHhhhhhhhhhhH
Q 022127 158 GTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVS-LLCLNYAK---SPAVAAVLITIALSLSSFSQAGYLLN 233 (302)
Q Consensus 158 ~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (302)
+++++++.+.|.+.||.++-+. .. .+......++ +.+..... ..+.......+.+++.....|...-.
T Consensus 312 v~Gmlga~~~gii~Dktk~fk~-------~~-~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~El 383 (480)
T KOG2563|consen 312 VAGMLGALASGIIADKTKKFKL-------TT-LVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFEL 383 (480)
T ss_pred HHHHHHHHHHHhhhhhhhhHHH-------HH-HHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceee
Confidence 9999999999999999976432 11 2222222222 22222111 12222222222223333334444433
Q ss_pred H-hhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc---chhHHHHHHHHHHHHHHHHHHhhc
Q 022127 234 I-QEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG---SFQAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 234 ~-~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
. +..+|...++..|+.+..+++-+.+-..+.+...+..+ ++...-+.....+.++.++..+++
T Consensus 384 gvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r 450 (480)
T KOG2563|consen 384 GVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFR 450 (480)
T ss_pred eeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhh
Confidence 3 44678888999999999999999999999999887655 123333334444444444444433
No 128
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.58 E-value=1.6e-13 Score=114.92 Aligned_cols=166 Identities=15% Similarity=0.102 Sum_probs=125.4
Q ss_pred HHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHH
Q 022127 120 NITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVS 199 (302)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (302)
.+.............|.+.++ +|.|+.+.++..+...++..++.++.|++.||+|||+.. ..+..+..++
T Consensus 14 ~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~---------~~~~~~~~~~ 83 (385)
T TIGR00710 14 SILGPLGIDMYLPAFPEIAAD-LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVL---------LLGLFIFALS 83 (385)
T ss_pred HHHHHHHHHHhcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH---------HHHHHHHHHH
Confidence 333344444455566766555 899999999999999999999999999999999976322 2444455555
Q ss_pred HHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHH
Q 022127 200 LLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFL 278 (302)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~ 278 (302)
.......++.+.......+.+.+.+...+.......|..| ++|++..|..+....++..++|.+.+.+.++.+ |+..+
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~~~~~ 162 (385)
T TIGR00710 84 SLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLS-WHAIF 162 (385)
T ss_pred HHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHH
Confidence 5555556666665655566666666667777888888887 789999999999999999999999999988876 99999
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 022127 279 TVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~ 296 (302)
.+.++..++..+......
T Consensus 163 ~~~~~~~~~~~~~~~~~~ 180 (385)
T TIGR00710 163 AFLSLAGILLSALIFFIL 180 (385)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 888777776665554443
No 129
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.58 E-value=1.4e-13 Score=113.66 Aligned_cols=165 Identities=18% Similarity=0.250 Sum_probs=129.2
Q ss_pred HHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhh
Q 022127 117 IIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGP 196 (302)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 196 (302)
.+..++...........+|.++.+++|.|+.+.++..+...++..++.++.|+++||+|+|+ ....+.++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~---------~l~~~~~~~ 72 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRR---------VLIIGLLLF 72 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHH---------HHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCee---------eEeehhhhh
Confidence 34555566666667777785666669999999999999999999999999999999999752 334555555
Q ss_pred HHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchh
Q 022127 197 GVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQ 275 (302)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~ 275 (302)
.++.....+.++.+.......+.+.+.+...+.......|..| ++|++..+..+...++|..++|.+.+.+.+..+ |+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~-~~ 151 (352)
T PF07690_consen 73 ALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG-WR 151 (352)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH-HC
T ss_pred hhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc-cc
Confidence 5553333333555566666667777777888888899999888 699999999999999999999999999997776 99
Q ss_pred HHHHHHHHHHHHHHHH
Q 022127 276 AFLTVTAGLYFVTTIF 291 (302)
Q Consensus 276 ~~~~~~~~~~~~~~~~ 291 (302)
..|++.++..++..++
T Consensus 152 ~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 152 WAFLISAILSLIAAIL 167 (352)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred cccccccchhhhhhhh
Confidence 9999999888888764
No 130
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.57 E-value=4.2e-13 Score=108.93 Aligned_cols=176 Identities=15% Similarity=0.016 Sum_probs=154.6
Q ss_pred ccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHH
Q 022127 111 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS 190 (302)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 190 (302)
...+.+.+..|......+.....+|...++ +|.|..++|...+.+.++..++.++...+.||+.|| .+..
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~d-l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr---------~lLl 82 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAAD-LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERR---------RLLL 82 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchH---------HHHH
Confidence 355678888888888999999999999998 999999999999999999999999999999999865 3334
Q ss_pred HhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhc
Q 022127 191 IGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ 269 (302)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~ 269 (302)
..+.+..++.......++.....+.-.+.+...+..++.......++.| ++|+++.++......++..+|.+++.++-|
T Consensus 83 ~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~ 162 (394)
T COG2814 83 GLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQ 162 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 6666667777888888999888888888888888889999999999887 899999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHhhcc
Q 022127 270 WLGSFQAFLTVTAGLYFVTTIFWNLYST 297 (302)
Q Consensus 270 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (302)
..| ||..|...+++.++..+......+
T Consensus 163 ~~G-WR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 163 LFG-WRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred Hhh-HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 998 999999999998888776655544
No 131
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.57 E-value=3.6e-13 Score=115.47 Aligned_cols=174 Identities=9% Similarity=0.075 Sum_probs=131.8
Q ss_pred ccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccch-hhccCCchhHHHHHHH
Q 022127 111 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDS-LIKAGYSLTLVRKIMQ 189 (302)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~~~~~~ 189 (302)
|.++.+.+..+...+++|....+++.|+++.+|.+..+++...........+..+++|+++|| +|||+..
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~--------- 84 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTI--------- 84 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHH---------
Confidence 456777788888889999999999999999999999999988888887888888899999999 8976322
Q ss_pred HHhhhhhHHHHHHhhcccchH-HHHHHHHHHHHHhhhhhhhhhhHHhhhcc-c--hhhhHHHHHHHHHHHHHHHHHHHhh
Q 022127 190 SIGFIGPGVSLLCLNYAKSPA-VAAVLITIALSLSSFSQAGYLLNIQEIAP-D--CAGFLHGIANSAGTLAAIISTIGTG 265 (302)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~--~~~~~~g~~~~~~~~g~~i~~~i~g 265 (302)
..+.++..++.+......+.. .......+.+.+.+...+...+...|.+| + +|+.+.+......++|..++|.+.|
T Consensus 85 ~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g 164 (489)
T PRK10207 85 VLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAP 164 (489)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 355555555555444443322 22234445556666677777888888886 4 3577899999999999999999999
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHHh
Q 022127 266 YFVQWLGSFQAFLTVTAGLYFVTTIFWNL 294 (302)
Q Consensus 266 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 294 (302)
++.++.| |+..|++.++..+++.+.+..
T Consensus 165 ~l~~~~g-w~~~F~i~~i~~~~~~~~~~~ 192 (489)
T PRK10207 165 VIADKFG-YSVTYNLCGAGLIIALLVYFA 192 (489)
T ss_pred HHHHhhC-hHHHHHHHHHHHHHHHHHHHH
Confidence 9999986 999998876655555444433
No 132
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.57 E-value=1.5e-13 Score=114.51 Aligned_cols=168 Identities=15% Similarity=0.076 Sum_probs=123.1
Q ss_pred HHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhh
Q 022127 117 IIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGP 196 (302)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 196 (302)
.+...+.....+......|.+.++ +|.|..+.+...+...++..++.+..|+++||+|||+.. ..+..+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~---------~~~~~~~ 78 (377)
T TIGR00890 9 TVIMCFTSGYVYTWTLLAPPLGRY-FGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVA---------MLGGILY 78 (377)
T ss_pred HHHHHHHhhHHhhhhhHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchh---------HHhHHHH
Confidence 333333344455556666665555 999999999999999999999999999999999987543 2445555
Q ss_pred HHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhH
Q 022127 197 GVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQA 276 (302)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~ 276 (302)
.++.......++.+.......+.+.+.+...+.......+..|++|+++.+.......+|..+++.+.+.+.+..| |+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~ 157 (377)
T TIGR00890 79 GLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINLEG-VPA 157 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhccc-HHH
Confidence 5555555666666665555555555555555555666777788889999999999999999888878887777665 999
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 022127 277 FLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~ 295 (302)
.|.+.++..++..+..+.+
T Consensus 158 ~f~~~~~~~~~~~~~~~~~ 176 (377)
T TIGR00890 158 AFIYMGIIFLLVIVLGAFL 176 (377)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9998888777666554433
No 133
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.56 E-value=3.2e-13 Score=114.97 Aligned_cols=174 Identities=14% Similarity=0.085 Sum_probs=117.7
Q ss_pred ccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHH
Q 022127 111 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS 190 (302)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 190 (302)
+.++...+.....+.....+....| ++++ .|.|+.+.++..+...++..++.+..|+++||+|+|+.. .
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~---------~ 95 (438)
T TIGR00712 27 QVFLGIFFGYAAYYLVRKNFALAMP-YLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFL---------P 95 (438)
T ss_pred HHHHHHHHHHHHHHHHhccHHhhhH-HHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceeh---------H
Confidence 3444444444444444444455555 4556 599999999999999999999999999999999987543 2
Q ss_pred HhhhhhHHHHHHhhcc----cchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhh
Q 022127 191 IGFIGPGVSLLCLNYA----KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTG 265 (302)
Q Consensus 191 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g 265 (302)
.+.++.+++....... ++.........+.+.+.+...+.......|..| ++|++++|+.+...++++.++|.+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~ 175 (438)
T TIGR00712 96 AGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVL 175 (438)
T ss_pred HHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHH
Confidence 3333334343333322 233333333444455555555666667778786 88999999999999999999998887
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHHhh
Q 022127 266 YFVQWLGSFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 266 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
...+...+|+..|++.++..++..+...++
T Consensus 176 ~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~ 205 (438)
T TIGR00712 176 LGMAWFNDWHAALYFPAICAIIVALFAFAM 205 (438)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 765543359999999888777655544443
No 134
>PRK03699 putative transporter; Provisional
Probab=99.56 E-value=6.7e-13 Score=111.49 Aligned_cols=171 Identities=12% Similarity=0.036 Sum_probs=127.0
Q ss_pred HHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHh
Q 022127 113 SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIG 192 (302)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 192 (302)
.+...+..++...........+|.+.++ +|.|..+.+...+...++..++.++.|++.||+|+|+. +..+
T Consensus 9 ~~~~~~~~~~~~~~~~~~g~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~---------~~~~ 78 (394)
T PRK03699 9 TWISFLSYALTGALVIVTGMVMGPIAEY-FNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQ---------LIFG 78 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH---------HHHH
Confidence 4455555555555555666778887666 89999999999999999999999999999999997632 2345
Q ss_pred hhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 022127 193 FIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWL 271 (302)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~ 271 (302)
..+..++.......++.+.......+.+.+.+...+.......+..| ++|+...+..+....+++.++|.+.+.+.+..
T Consensus 79 ~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 158 (394)
T PRK03699 79 FALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARS 158 (394)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 55555555555556666665555566666666666667777788877 78999999998888999999999999887654
Q ss_pred cchhHHHHHHHHHHHHHHHHHH
Q 022127 272 GSFQAFLTVTAGLYFVTTIFWN 293 (302)
Q Consensus 272 g~~~~~~~~~~~~~~~~~~~~~ 293 (302)
.+|+..|...++..++..++.+
T Consensus 159 ~gw~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 159 IEWYWVYACIGLVYVAIFILTL 180 (394)
T ss_pred ccHHHHHHHHHHHHHHHHHHHH
Confidence 3599999887777666554443
No 135
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.55 E-value=8.9e-13 Score=113.85 Aligned_cols=173 Identities=12% Similarity=0.084 Sum_probs=132.1
Q ss_pred HHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHh
Q 022127 113 SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIG 192 (302)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 192 (302)
+..+.+..+....-......-+|.+.++ +|.+..+.++..+.+.++...+.+..|+++||+|||+. ...+
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~---------l~~~ 77 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRL---------LMLG 77 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH---------HHHH
Confidence 3445555666665666677778988777 89999999999999999999999999999999997632 2355
Q ss_pred hhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhh-hcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 022127 193 FIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQE-IAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQW 270 (302)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~ 270 (302)
..+..++.......++.+..++...+.+.+.+...+.......+ ..| ++|+++.|+......+|..+||.+.|.+.++
T Consensus 78 ~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~ 157 (495)
T PRK14995 78 GTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH 157 (495)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 66666666666677777776666666666666655655555544 445 8899999999999999999999999999998
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHhhc
Q 022127 271 LGSFQAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 271 ~g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
.| |++.|++...+.++..++.....
T Consensus 158 ~g-wr~~f~i~~~~~~~~~~l~~~~l 182 (495)
T PRK14995 158 FY-WGSVFLINVPIVLVVMGLTARYV 182 (495)
T ss_pred CC-hHHHHHHHHHHHHHHHHHHHHhC
Confidence 86 99999988777776665554443
No 136
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.55 E-value=1e-12 Score=108.76 Aligned_cols=280 Identities=13% Similarity=0.057 Sum_probs=175.1
Q ss_pred hhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHH--HHHHHHHHHHHHhhhcCCCCC---C
Q 022127 3 AMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILF--SSLGLLWLSTWTSKVTNDPCN---S 77 (302)
Q Consensus 3 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~--~~~~~~~~~~~~~~~~~~p~~---~ 77 (302)
+..+++.+|+|++||+++.|+..++..+|.+++++++++ ...+|||+.+... ...+.+..+++.+++|..++. +
T Consensus 134 A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~ 212 (511)
T TIGR00806 134 AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKRSLFFN 212 (511)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhc
Confidence 567899999999999999999999999999999999999 5678999876553 223334455566667744331 1
Q ss_pred CCCChH--HHHHHHhcCcccc--cC----C--------CCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHh
Q 022127 78 PFVSKS--ELRLIQAGKSDSV--KK----R--------NPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTV 141 (302)
Q Consensus 78 ~~~~~~--~~~~~~~~~~~~~--~~----~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (302)
+..+.+ ...+.++...++. +. . ...+.++..+||.+....+-+.+...+++-+.+|.....++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v 292 (511)
T TIGR00806 213 RLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTL 292 (511)
T ss_pred cccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHc
Confidence 110000 0000000000000 00 0 011344557889888888888888888888888777777664
Q ss_pred hccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHH
Q 022127 142 FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALS 221 (302)
Q Consensus 142 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (302)
.+-++...|..-+...+.+.+.++..|++-.++.+. ....+.+..++.+..++++...++.+...+...+...
T Consensus 293 ~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~-------~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~ 365 (511)
T TIGR00806 293 DESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARW-------SKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRG 365 (511)
T ss_pred CCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhh-------HHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHH
Confidence 332223567777777888888999999885555221 2333344445555567777788888888888888777
Q ss_pred HhhhhhhhhhhHHhhh-ccchhhhHHHHHHHHHHHHHHHHHHHh----hhhhc---cccchhHHHHHHHHHHHHHHH
Q 022127 222 LSSFSQAGYLLNIQEI-APDCAGFLHGIANSAGTLAAIISTIGT----GYFVQ---WLGSFQAFLTVTAGLYFVTTI 290 (302)
Q Consensus 222 ~~~~~~~~~~~~~~~~-~p~~~~~~~g~~~~~~~~g~~i~~~i~----g~l~~---~~g~~~~~~~~~~~~~~~~~~ 290 (302)
...+..+....-+.+. ..+.-|...|+.+++.-+-..+-..+. |.=.| ++--|..-|.+.+.+.++..+
T Consensus 366 ~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iVvd~~gl~l~i~~Qf~vY~~yf~~~~~i~~~~~~ 442 (511)
T TIGR00806 366 IYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITAVVSDKRGLGLQVRKQFRIYSVYFLVLSIICFFGAG 442 (511)
T ss_pred HHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEEEEcccccCCCceeEEEehhhHHHHHHHHHHHHHH
Confidence 7777666665555544 446679999988877766555544433 22111 111244455555555555544
No 137
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.55 E-value=6.8e-13 Score=111.96 Aligned_cols=169 Identities=8% Similarity=-0.030 Sum_probs=125.9
Q ss_pred HHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhh
Q 022127 115 TVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFI 194 (302)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 194 (302)
......+.............|.+.++ +|.|+.+.++..+...++..++.++.|+++||+|+|+.. ..+..
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~---------~~~~~ 88 (406)
T PRK11551 19 LCFLVALLEGLDLQSAGVAAPRMAQE-FGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRIL---------IVSVA 88 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH---------HHHHH
Confidence 33444445455555566667777666 899999999999999999999999999999999987543 23333
Q ss_pred hhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccc
Q 022127 195 GPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGS 273 (302)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~ 273 (302)
+..+..+.....++.+.......+.+...+...+.......|..| ++|++++++.+....+|..+++.+.+.+.+..+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~- 167 (406)
T PRK11551 89 LFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAA- 167 (406)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccC-
Confidence 444444444555666666666666666666667777888888887 889999999999999999999999888887765
Q ss_pred hhHHHHHHHHHHHHHHHHHHh
Q 022127 274 FQAFLTVTAGLYFVTTIFWNL 294 (302)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~ 294 (302)
|+..+++.+++.++..+....
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~ 188 (406)
T PRK11551 168 WRHIFYVGGVGPLLLVPLLMR 188 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 998888877665555544433
No 138
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.55 E-value=3.2e-13 Score=116.62 Aligned_cols=170 Identities=10% Similarity=0.046 Sum_probs=133.1
Q ss_pred HHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhh
Q 022127 115 TVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFI 194 (302)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 194 (302)
...+..+.............|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+. ...+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~---------~~~~~~ 75 (485)
T TIGR00711 6 VLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRL---------FLISTF 75 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHH---------HHHHHH
Confidence 44455555555556666778877776 89999999999999999999999999999999997632 235555
Q ss_pred hhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccc
Q 022127 195 GPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGS 273 (302)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~ 273 (302)
+..++.......++.........+.+.+.+...+.......|..| ++|+++.++......+|..++|.+.+++.++.+
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~- 154 (485)
T TIGR00711 76 AFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYH- 154 (485)
T ss_pred HHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcC-
Confidence 556666666666777766666666666677777778888889887 889999999999999999999999999999876
Q ss_pred hhHHHHHHHHHHHHHHHHHHhh
Q 022127 274 FQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
|+..|++.+...++..++....
T Consensus 155 w~~~f~~~~~~~~~~~~~~~~~ 176 (485)
T TIGR00711 155 WRWIFLINVPIGIIVVVVAFFI 176 (485)
T ss_pred ceehhhhhhHHHHHHHHHHHHH
Confidence 9999988777766665554443
No 139
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.55 E-value=3.1e-13 Score=113.75 Aligned_cols=170 Identities=15% Similarity=0.056 Sum_probs=123.2
Q ss_pred CccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHH
Q 022127 110 KLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQ 189 (302)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 189 (302)
++++..+.+..+............+|.++++++|.|+.+.++..+...++..+++++.|+++||+|||+...
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~-------- 85 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVV-------- 85 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHH--------
Confidence 356667777788888887778889999988889999999999999999999999999999999999875431
Q ss_pred HHhhhhhHHH---HHHhhccc-----chHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHH
Q 022127 190 SIGFIGPGVS---LLCLNYAK-----SPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIIS 260 (302)
Q Consensus 190 ~~~~~~~~~~---~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~ 260 (302)
.+.+...++ .......+ +....+....+.+.+.+...+.......+..| ++|+++.++.....++|..++
T Consensus 86 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g 164 (399)
T PRK05122 86 -FGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIG 164 (399)
T ss_pred -HHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHH
Confidence 333222222 11212222 12233334444455555555666666677766 889999999998899999999
Q ss_pred HHHhhhhhccccchhHHHHHHHHHHHHHH
Q 022127 261 TIGTGYFVQWLGSFQAFLTVTAGLYFVTT 289 (302)
Q Consensus 261 ~~i~g~l~~~~g~~~~~~~~~~~~~~~~~ 289 (302)
|.+.+.+.+..| |+..+.+..+..++..
T Consensus 165 ~~l~~~l~~~~g-~~~~~~~~~~~~~~~~ 192 (399)
T PRK05122 165 APLGVLLYHWGG-LAGLGLLIMLLALLGL 192 (399)
T ss_pred HHHHHHHHHccc-HHHHHHHHHHHHHHHH
Confidence 999999998876 8887776665544433
No 140
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.55 E-value=1.9e-13 Score=114.69 Aligned_cols=157 Identities=15% Similarity=0.080 Sum_probs=123.4
Q ss_pred HHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhccc
Q 022127 128 FVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK 207 (302)
Q Consensus 128 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (302)
.......|. +++++|.|..+.++..+...++..++.++.|+++||+|||+... .+.++..++.......+
T Consensus 11 ~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~---------~~~~~~~~~~~~~~~~~ 80 (399)
T TIGR00893 11 ANLSFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLA---------VFIVIWGVFTGLQAFAG 80 (399)
T ss_pred HhhhHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeH---------HHHHHHHHHHHHHHHHc
Confidence 344445555 55559999999999999999999999999999999999876542 44444455555555556
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHH
Q 022127 208 SPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYF 286 (302)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~ 286 (302)
+.+.......+.+.+.+...+.......|..| ++|++..++.+...++|..++|.+.+.+.+..+ |+..|.+.++..+
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~ 159 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFS-WQWAFIIEGVLGI 159 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCC-chHHHHHHHHHHH
Confidence 77666666677777777777888888899888 889999999999999999999999999988876 9999988887776
Q ss_pred HHHHHHHhh
Q 022127 287 VTTIFWNLY 295 (302)
Q Consensus 287 ~~~~~~~~~ 295 (302)
+..+.....
T Consensus 160 ~~~~~~~~~ 168 (399)
T TIGR00893 160 IWGVLWLKF 168 (399)
T ss_pred HHHHHhhhe
Confidence 665555443
No 141
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.55 E-value=4.8e-13 Score=111.61 Aligned_cols=168 Identities=10% Similarity=0.051 Sum_probs=118.9
Q ss_pred HHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhH
Q 022127 118 IANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPG 197 (302)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 197 (302)
+..++...+.......+|.|+++++|.|+.+.++..+...+...+..+..|+++||+|+|+. .+ ..+.....
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~-------~~-~~~~~~~~ 75 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKG-------LI-LFCCLLAA 75 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchH-------HH-HHHHHHHH
Confidence 44666667777788889999988799999999999999999999999999999999998632 12 23333333
Q ss_pred HHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhH--HHHHHHHHHHHHHHHHHHhhhhhccccch
Q 022127 198 VSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFL--HGIANSAGTLAAIISTIGTGYFVQWLGSF 274 (302)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~--~g~~~~~~~~g~~i~~~i~g~l~~~~g~~ 274 (302)
+........++.+.......+.+...+...+.......|..| +.|+.+ .+......++|..++|.+.+.+.+..| |
T Consensus 76 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~-~ 154 (375)
T TIGR00899 76 LACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFG-F 154 (375)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcc-c
Confidence 344444455555544333333333334445555566667666 445543 677788889999999999999998876 9
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q 022127 275 QAFLTVTAGLYFVTTIFWNL 294 (302)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~ 294 (302)
+..|++.+.+.++..+....
T Consensus 155 ~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 155 TVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999988877766655544
No 142
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.55 E-value=1e-12 Score=110.36 Aligned_cols=172 Identities=10% Similarity=-0.006 Sum_probs=126.4
Q ss_pred HHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhh
Q 022127 114 WTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGF 193 (302)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 193 (302)
.......+....+.......+|.+.++ +|.|..+.+...+...++..++.++.|+++||+|||+. + ..+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~--------l-~~~~ 75 (392)
T PRK10473 6 LCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPV--------A-IPGA 75 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHH--------H-HHHH
Confidence 334444455555555666778877776 89999999999999999999999999999999997632 1 2444
Q ss_pred hhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 022127 194 IGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 272 (302)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g 272 (302)
+...++.......++.+.......+.+.+.+...+.......|..| ++|+++.+..+...+++..++|.+.+.+.+..+
T Consensus 76 ~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g 155 (392)
T PRK10473 76 ALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFP 155 (392)
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 4555555555555565554444455555555556667777888877 889999999999999999999999998887765
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhc
Q 022127 273 SFQAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
|+..+.+.+++.++..++.....
T Consensus 156 -~~~~~~~~~~~~~i~~~~~~~~~ 178 (392)
T PRK10473 156 -WQSLFYTMAAMGILVLLLSLFIL 178 (392)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHc
Confidence 99988888877766665544443
No 143
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.54 E-value=5e-13 Score=118.55 Aligned_cols=154 Identities=10% Similarity=-0.020 Sum_probs=114.8
Q ss_pred HHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccch
Q 022127 130 LLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSP 209 (302)
Q Consensus 130 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (302)
+...+|.+.++ +|.+..+.+++.+...++.+++.+++|+++||+|||+.. .+++++..++.++..+.++.
T Consensus 186 is~ilp~i~~~-~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~l---------ii~lil~~i~~ll~afa~s~ 255 (742)
T TIGR01299 186 VGFVLPSAEKD-LCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCL---------LICLSVNGFFAFFSSFVQGY 255 (742)
T ss_pred HHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH---------HHHHHHHHHHHHHHHHHhhH
Confidence 34455554444 899999999999999999999999999999999986322 23444444444455555666
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc------------chhH
Q 022127 210 AVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG------------SFQA 276 (302)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g------------~~~~ 276 (302)
+..++..++.+++.+...+....++.|..| ++|+...+..+....+|.++++.++..+....| +|+.
T Consensus 256 ~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~ 335 (742)
T TIGR01299 256 GFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRV 335 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHH
Confidence 666666677777777777888899999998 889999999999999999999987766654321 4788
Q ss_pred HHHHHHHHHHHHHHHHH
Q 022127 277 FLTVTAGLYFVTTIFWN 293 (302)
Q Consensus 277 ~~~~~~~~~~~~~~~~~ 293 (302)
.+++.++..++..+..+
T Consensus 336 l~~i~~lp~ll~ll~~~ 352 (742)
T TIGR01299 336 FVIVCAFPCVFAIGALT 352 (742)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88777766665554433
No 144
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.54 E-value=6.9e-13 Score=109.83 Aligned_cols=163 Identities=9% Similarity=-0.065 Sum_probs=115.5
Q ss_pred hHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHh
Q 022127 124 NWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCL 203 (302)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (302)
+.....+...+|.+.++ +|.|+.+.++..+...++..++.+..|+++||+|||+. + .........+....
T Consensus 4 ~~~~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~--------~-~~~~~~~~~~~~~~ 73 (368)
T TIGR00903 4 QAIWVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWF--------L-FGSLATFAAAAGRL 73 (368)
T ss_pred hHHHHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHH--------H-HHHHHHHHHHHHHH
Confidence 34555566777877776 99999999999999999999999999999999996532 1 12222222222222
Q ss_pred hcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHH
Q 022127 204 NYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTA 282 (302)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~ 282 (302)
...++.......-.+.+.+.+.. ........|..| ++|+++.++.+....+|..+++.+.+.+.++.| |+..|.+.+
T Consensus 74 ~~~~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~g-Wr~~f~~~~ 151 (368)
T TIGR00903 74 LDPFNYEWLLACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGG-LQLLIIPIA 151 (368)
T ss_pred HHhccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-hHHHHHHHH
Confidence 22245555555555555555543 333344466666 899999999999999999999999999998876 999999988
Q ss_pred HHHHHHHHHHHhhccC
Q 022127 283 GLYFVTTIFWNLYSTG 298 (302)
Q Consensus 283 ~~~~~~~~~~~~~~~~ 298 (302)
++.++..++.....++
T Consensus 152 ~l~~~~~~~~~~~lp~ 167 (368)
T TIGR00903 152 AVAAAGIILVLAALPA 167 (368)
T ss_pred HHHHHHHHHHHHHcCC
Confidence 7776666555544443
No 145
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.54 E-value=9.3e-12 Score=105.59 Aligned_cols=280 Identities=10% Similarity=0.023 Sum_probs=154.5
Q ss_pred chhhhhhhcccCcc--chhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCC---
Q 022127 2 PAMSTLTSRWFPSH--ERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCN--- 76 (302)
Q Consensus 2 p~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~--- 76 (302)
|...++++|.+|++ +|..++++.+.+.++|..++|.+.+++.+..|||+.|.+.++.. +..++.+...++..++
T Consensus 119 ~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm-~l~li~~~~~~~~l~~~~~ 197 (493)
T PRK15462 119 SNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGM-IAGLVIFLCGNRHFTHTRG 197 (493)
T ss_pred ccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHH-HHHHHHHHHhhhhhccCCC
Confidence 45678899999975 69999999999999999999999999999999999999866533 3333333322211111
Q ss_pred -CCCCChHHHHH----------------HHhc-Cccccc------------------CCCCcchHHhhcCccHHHHH---
Q 022127 77 -SPFVSKSELRL----------------IQAG-KSDSVK------------------KRNPPSLRHLLSKLPSWTVI--- 117 (302)
Q Consensus 77 -~~~~~~~~~~~----------------~~~~-~~~~~~------------------~~~~~~~~~~~~~~~~~~~~--- 117 (302)
+++..++++.. .... ..++.. ...+.+..| | ++++...
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e--r-~r~~~~~~l~ 274 (493)
T PRK15462 198 VNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAENQKQ--R-KELGLIVTLT 274 (493)
T ss_pred CCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH--H-hhHHHHHHHH
Confidence 11111111100 0000 000000 000000000 1 2222222
Q ss_pred HHHHhhhHHHHHHHhhhhHHHHHh-----hccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHh
Q 022127 118 IANITNNWGYFVLLSWMPIYFNTV-----FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIG 192 (302)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 192 (302)
+........+....+-+..|.++. +|++ ...++..+...+.-++.+++.+++-.|..+|+.......|.. ++
T Consensus 275 ~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa--~g 351 (493)
T PRK15462 275 FFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFA--LG 351 (493)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHH--HH
Confidence 112222222222234444555443 2322 235677788888888888888888777744321111224444 55
Q ss_pred hhhhHHHHHHhhc----c-----cchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHH-HHHHHHHH
Q 022127 193 FIGPGVSLLCLNY----A-----KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAG-TLAAIIST 261 (302)
Q Consensus 193 ~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~-~~g~~i~~ 261 (302)
+++.+++...+.. . .+.++.+....+...+--+..|...+.+.++.| +.+|..+|...... .+|..++.
T Consensus 352 ~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g 431 (493)
T PRK15462 352 LGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAG 431 (493)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555444321 1 134444555555555666677888899999999 78999999986643 56766666
Q ss_pred HHhhhhhcc-----------ccchhHHHHHHHHHHHHH
Q 022127 262 IGTGYFVQW-----------LGSFQAFLTVTAGLYFVT 288 (302)
Q Consensus 262 ~i~g~l~~~-----------~g~~~~~~~~~~~~~~~~ 288 (302)
.+.+...+. ...|...|...+...++.
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 432 VIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 666655311 113556777766655544
No 146
>PRK11043 putative transporter; Provisional
Probab=99.54 E-value=1.4e-12 Score=109.88 Aligned_cols=165 Identities=11% Similarity=0.093 Sum_probs=117.3
Q ss_pred hhHHHHHHHhhhhHH--HHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHH
Q 022127 123 NNWGYFVLLSWMPIY--FNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSL 200 (302)
Q Consensus 123 ~~~~~~~~~~~~~~~--~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (302)
..........+.|.+ +++++|.++.+.+...+...++..++.++.|+++||+|||+.. ..+..+..++.
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~---------~~~~~~~~~~~ 85 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVL---------LAGLSLFALGS 85 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHH---------HHHHHHHHHHH
Confidence 334444445555544 4455899999999999999999999999999999999987422 24444444455
Q ss_pred HHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHH
Q 022127 201 LCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLT 279 (302)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~ 279 (302)
......++.+.......+.+.+.+...+.......|..| ++++...+..+....++..++|.+.+.+.+..| |+..++
T Consensus 86 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~~~~~ 164 (401)
T PRK11043 86 LGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFG-WQAIFA 164 (401)
T ss_pred HHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHH
Confidence 555555665555544444444444444455566777777 668888898888899999999999999998886 999998
Q ss_pred HHHHHHHHHHHHHHhhcc
Q 022127 280 VTAGLYFVTTIFWNLYST 297 (302)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~ 297 (302)
+.++..++..+....+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~ 182 (401)
T PRK11043 165 TLFAITLLLILPTLRLKP 182 (401)
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 887777766655544443
No 147
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.53 E-value=4.9e-13 Score=113.31 Aligned_cols=180 Identities=13% Similarity=0.034 Sum_probs=120.3
Q ss_pred HhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHH
Q 022127 106 HLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVR 185 (302)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~ 185 (302)
+.+++|++|...+..++...+......++|.|+++++|+|+.+.|...+...++..+++++.|+++||+|+|+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~----- 79 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHL----- 79 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH-----
Confidence 456789999999999998888888899999999998999999999999999999999999999999999987322
Q ss_pred HHHHHHhhhhhHHHHH---HhhcccchH-HHHHHHHHHHHHhhhhhhhhhhHHhhh---ccchhhhHHHHHHHHHHHHHH
Q 022127 186 KIMQSIGFIGPGVSLL---CLNYAKSPA-VAAVLITIALSLSSFSQAGYLLNIQEI---APDCAGFLHGIANSAGTLAAI 258 (302)
Q Consensus 186 ~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~p~~~~~~~g~~~~~~~~g~~ 258 (302)
. .+.....+... .....+... .......++....+...........+. .+++++..+|..+...++|..
T Consensus 80 --~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 155 (420)
T PRK09528 80 --L--WIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWA 155 (420)
T ss_pred --H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHH
Confidence 1 11111111111 111111000 011111222222222222222222222 234567788888999999999
Q ss_pred HHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhc
Q 022127 259 ISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 259 i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
++|.+.|.+.+. + ++..|++.++..++..++.+...
T Consensus 156 i~~~~~g~l~~~-~-~~~~f~~~~~~~~~~~~~~~~~~ 191 (420)
T PRK09528 156 LCAFIAGILFNI-N-PQINFWLGSGSALILLVLLFFAK 191 (420)
T ss_pred HHHHHHHHHHhc-C-chHhHHHHHHHHHHHHHHHhccc
Confidence 999999999875 3 78888888777766665555443
No 148
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.53 E-value=8.9e-13 Score=110.54 Aligned_cols=171 Identities=13% Similarity=0.047 Sum_probs=122.9
Q ss_pred CccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHH
Q 022127 110 KLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQ 189 (302)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 189 (302)
+|+++.+.+..++............+.+.++ ++.++.+.++..+...+...+..++.|+++||++||+...
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~-------- 72 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKE-LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMF-------- 72 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhH--------
Confidence 4667777777777776666566666666555 8889889999999999999999999999999999986432
Q ss_pred HHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 022127 190 SIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFV 268 (302)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~ 268 (302)
.+..+..++.+......+. .....+.+.+.+...+...+.+.|..| ++|++++|+.+...+++..+||.++|.+.
T Consensus 73 -~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~ 148 (393)
T PRK11195 73 -IANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALA 148 (393)
T ss_pred -HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2322222222222222222 333345566677778888899999888 88999999999999999999999999998
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHhh
Q 022127 269 QWLGSFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 269 ~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
+.. +...+.+.+...+++.+....+
T Consensus 149 ~~~--~~~~~~i~~~~~~~~~~~~~~l 173 (393)
T PRK11195 149 DPH--AEAALAVCALIYLLAALFNLFI 173 (393)
T ss_pred HHH--HHHHHHHHHHHHHHHHHHHhcC
Confidence 863 6666666655555444433333
No 149
>TIGR00895 2A0115 benzoate transport.
Probab=99.52 E-value=3.2e-13 Score=113.45 Aligned_cols=159 Identities=13% Similarity=0.073 Sum_probs=119.1
Q ss_pred hHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHh
Q 022127 124 NWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCL 203 (302)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (302)
...........|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+. ...+..+..++....
T Consensus 30 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~---------~~~~~~~~~~~~~~~ 99 (398)
T TIGR00895 30 GYDLAAMGFAAPAISAE-WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRV---------LLWSILLFSVFTLLC 99 (398)
T ss_pred HHHHHHHHhhHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHH---------HHHHHHHHHHHHHHH
Confidence 33344445556666555 89999999999999999999999999999999996532 234444455555555
Q ss_pred hcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHH
Q 022127 204 NYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTA 282 (302)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~ 282 (302)
...++.+.......+.+.+.+...+...+...|..| ++|+++.|+.+....+|..++|.+.+.+.+..| |+..+.+.+
T Consensus 100 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-~~~~~~~~~ 178 (398)
T TIGR00895 100 ALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFG-WRSLFYVGG 178 (398)
T ss_pred HHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccc-ceeehhhhh
Confidence 555666655555566666666677778888899888 789999999999999999999999999998876 888888776
Q ss_pred HHHHHHHHHHH
Q 022127 283 GLYFVTTIFWN 293 (302)
Q Consensus 283 ~~~~~~~~~~~ 293 (302)
+..++..++..
T Consensus 179 ~~~~~~~~~~~ 189 (398)
T TIGR00895 179 IAPLLLLLLLM 189 (398)
T ss_pred hHHHHHHHHHH
Confidence 55554444433
No 150
>PRK12382 putative transporter; Provisional
Probab=99.52 E-value=1.4e-12 Score=109.57 Aligned_cols=165 Identities=14% Similarity=0.021 Sum_probs=117.6
Q ss_pred CccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHH
Q 022127 110 KLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQ 189 (302)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 189 (302)
++.++...+..+............+|.++++++|.|+.+.+...+...++..+++++.|+++||+|||+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l--------- 84 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSA--------- 84 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHH---------
Confidence 45666777777777777777778889888877999999999999999999999999999999999987422
Q ss_pred HHhhhhhHHHHH---Hhhc-----ccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHH
Q 022127 190 SIGFIGPGVSLL---CLNY-----AKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIIS 260 (302)
Q Consensus 190 ~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~ 260 (302)
..+.+...++.. .... .++.+...+...+.+.+.+...+...+...+..| |+|++++|......+.+..++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g 164 (392)
T PRK12382 85 LQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAG 164 (392)
T ss_pred HHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHH
Confidence 233222222211 1111 1233333444444444455445555666677776 889999999999999999999
Q ss_pred HHHhhhhhccccchhHHHHHHHHH
Q 022127 261 TIGTGYFVQWLGSFQAFLTVTAGL 284 (302)
Q Consensus 261 ~~i~g~l~~~~g~~~~~~~~~~~~ 284 (302)
|.+.+.+.+..| |+..+.+....
T Consensus 165 ~~~~~~l~~~~g-~~~~~~~~~~~ 187 (392)
T PRK12382 165 APLGLLLHSHFG-FAALALTTMVL 187 (392)
T ss_pred HHHHHHHHhccC-hHHHHHHHHHH
Confidence 999999988876 87766554443
No 151
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.52 E-value=2.5e-12 Score=107.97 Aligned_cols=176 Identities=13% Similarity=0.096 Sum_probs=117.9
Q ss_pred CccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHH-HHHhhhhhhhcccchhhccCCchhHHHHHH
Q 022127 110 KLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWG-TMAVSGYMAGKASDSLIKAGYSLTLVRKIM 188 (302)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~ 188 (302)
|.+.+...+..++...........+|.|+++++|.|+.+.|...+...+ +...+.+.+++ .||+|+|+ +.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~-------~~~ 85 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRK-------SLI 85 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcccchh-------HHH
Confidence 5667777788888888888888999999988899999999998766555 45555555666 99999873 222
Q ss_pred HHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chh--hhHHHHHHHHHHHHHHHHHHHhh
Q 022127 189 QSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCA--GFLHGIANSAGTLAAIISTIGTG 265 (302)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~--~~~~g~~~~~~~~g~~i~~~i~g 265 (302)
..+.+...+........++.+.......+..+......+.......+..+ +.| +...+..+...++|..++|.+.+
T Consensus 86 -~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~ 164 (393)
T PRK15011 86 -VFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAY 164 (393)
T ss_pred -HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 23333333334444445555443322222223333444445555566544 333 34457888889999999999999
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHHhh
Q 022127 266 YFVQWLGSFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 266 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
.+.++.| |+..|++.++..++..+.....
T Consensus 165 ~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~ 193 (393)
T PRK15011 165 ALAMGFS-FTVMYLSAAVAFIVCGVMVWLF 193 (393)
T ss_pred HHHHhcC-hHHHHHHHHHHHHHHHHHHHhh
Confidence 9998886 9999998887776666554443
No 152
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.52 E-value=1.6e-12 Score=109.50 Aligned_cols=168 Identities=11% Similarity=0.022 Sum_probs=126.4
Q ss_pred HHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHh
Q 022127 113 SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIG 192 (302)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 192 (302)
+....+..+.............|.+.++ +|.|+.+.++..+...++..++.++.|+++||+|||+. + ..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~--------~-~~~ 83 (405)
T TIGR00891 14 FSAAWLGWLLDAFDFFLVALVLAEVAGE-FGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLP--------M-VTS 83 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH--------H-HHH
Confidence 3455555666666666666667766555 99999999999999999999999999999999997632 2 244
Q ss_pred hhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 022127 193 FIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWL 271 (302)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~ 271 (302)
.++..++.......++.+.......+.+.+.+...+.......|..| ++|+++.++.+....+|..+++.+.+.+.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~ 163 (405)
T TIGR00891 84 IVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVW 163 (405)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45555555555556666666666666666666677777788888887 88999999999999999999999999988765
Q ss_pred c-chhHHHHHHHHHHHHHHH
Q 022127 272 G-SFQAFLTVTAGLYFVTTI 290 (302)
Q Consensus 272 g-~~~~~~~~~~~~~~~~~~ 290 (302)
+ +|+..+.+.++..++..+
T Consensus 164 ~~~w~~~f~~~~~~~~~~~~ 183 (405)
T TIGR00891 164 GDGWRALFFISILPIIFALW 183 (405)
T ss_pred CccHHHHHHHHHHHHHHHHH
Confidence 4 488888876655555443
No 153
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.52 E-value=1.3e-12 Score=112.12 Aligned_cols=162 Identities=11% Similarity=0.032 Sum_probs=108.5
Q ss_pred hHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHh
Q 022127 124 NWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCL 203 (302)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (302)
....+......|.+.+ .+|+|..+.+...+...++..++.++.|+++||+|+|+. + ..+.+...++.+..
T Consensus 49 ~~~~~~~~~~~~~l~~-~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~--------~-~~~~~~~~~~~~~~ 118 (476)
T PLN00028 49 FVSTFAAAPLLPIIRD-NLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYG--------S-AFLLMLTAPAVFCM 118 (476)
T ss_pred HHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH--------H-HHHHHHHHHHHHHH
Confidence 3333344455555544 499999999999888889999999999999999998632 1 24444445555555
Q ss_pred hcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhc----c----ccch
Q 022127 204 NYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ----W----LGSF 274 (302)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~----~----~g~~ 274 (302)
...++.........+.+++.+.. ......+.+..| ++|++++|+.+...++|+.+++.+.+.+.+ . ..+|
T Consensus 119 ~~~~s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gW 197 (476)
T PLN00028 119 SLVSSATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAW 197 (476)
T ss_pred HHhcCHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhh
Confidence 55556554444434433333322 233445677777 889999999998888888888776665432 1 1149
Q ss_pred hHHHHHHHHHHHHHHHHHHhhc
Q 022127 275 QAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
+..|.+.+++.++..+...++.
T Consensus 198 r~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 198 RIAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 9999998887776665555544
No 154
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.51 E-value=1.8e-12 Score=107.87 Aligned_cols=166 Identities=15% Similarity=0.066 Sum_probs=119.1
Q ss_pred cHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHH
Q 022127 112 PSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSI 191 (302)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 191 (302)
+++...+..+......+....+.|.++++++|.|+.+.++..+...++..++.++.|+++||+|+|+.. ..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~---------~~ 72 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTT---------TL 72 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHH---------HH
Confidence 456677777777778888889999878777999999999999999999999999999999999976321 24
Q ss_pred hhhhhHHHHHHhhccc-chHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhc
Q 022127 192 GFIGPGVSLLCLNYAK-SPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ 269 (302)
Q Consensus 192 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~ 269 (302)
+.++..++.......+ +.+.......+.+...+ ..........+..| ++|+++.++.....++|..+++.+.+.+.+
T Consensus 73 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 73 SLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 5555555555555555 55555444444444333 33445667778777 889999999998888888888877776654
Q ss_pred c---------ccchhHHH-HHHHHHHHH
Q 022127 270 W---------LGSFQAFL-TVTAGLYFV 287 (302)
Q Consensus 270 ~---------~g~~~~~~-~~~~~~~~~ 287 (302)
. ..+|+..+ ...+....+
T Consensus 152 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 179 (366)
T TIGR00886 152 SLIFGAGLPAHLAWGWAFVIVPAGILLL 179 (366)
T ss_pred HHHhcccccccccccchhHHHHHHHHHH
Confidence 2 11488877 333444333
No 155
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.51 E-value=8e-13 Score=109.06 Aligned_cols=168 Identities=16% Similarity=0.111 Sum_probs=134.1
Q ss_pred HHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhh
Q 022127 115 TVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFI 194 (302)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 194 (302)
......+.............|.+.++ .|.++.+.+...+...++..++.++.|+++||+|||+.. ..+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~---------~~~~~ 72 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAED-LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVL---------LLGLL 72 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhh---------HHHHH
Confidence 44556666677777788888988877 799999999999999999999999999999999987532 35555
Q ss_pred hhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccc
Q 022127 195 GPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGS 273 (302)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~ 273 (302)
...++.......++.+.......+.+.+.+...+.......|..| |+|++..+..+....+|..++|.+.+.+.+..+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~- 151 (352)
T cd06174 73 LFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLG- 151 (352)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 555555555555666666666666666667777888888899888 789999999999999999999999999998875
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 022127 274 FQAFLTVTAGLYFVTTIFWN 293 (302)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~ 293 (302)
|+..+.+.+...++..+...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~ 171 (352)
T cd06174 152 WRWLFLILAILGLLLALLLL 171 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 88888888877776665543
No 156
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.51 E-value=1.9e-12 Score=108.62 Aligned_cols=155 Identities=15% Similarity=0.031 Sum_probs=123.2
Q ss_pred HHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhccc
Q 022127 128 FVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK 207 (302)
Q Consensus 128 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (302)
......+|...++ +|.|..+.++..+...++..++.+..|++.||+|+|+. ...+..+.+++.....+.+
T Consensus 26 ~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~---------l~~~~~l~~~~~~~~~~a~ 95 (393)
T PRK09705 26 TSVGPLLPQLRQA-SGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRS---------VAISLLLIAVGALMRELYP 95 (393)
T ss_pred hccchhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHH---------HHHHHHHHHHHHHHHHHCc
Confidence 4455667776665 99999999999999999999999999999999997633 2467777777887777888
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHH
Q 022127 208 SPAVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFV 287 (302)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~ 287 (302)
+.+.......+.+.+.+...+.......+.+|++|+.++|........|..+++.+.+.+.++..+|+..+...++..++
T Consensus 96 ~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~ 175 (393)
T PRK09705 96 QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVV 175 (393)
T ss_pred chHHHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 87777777777777777767777777788888889999999999999999999999999988764588877665555444
Q ss_pred HHHHH
Q 022127 288 TTIFW 292 (302)
Q Consensus 288 ~~~~~ 292 (302)
.....
T Consensus 176 ~~~~~ 180 (393)
T PRK09705 176 ALFAW 180 (393)
T ss_pred HHHHH
Confidence 43333
No 157
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.50 E-value=1.4e-12 Score=108.85 Aligned_cols=159 Identities=12% Similarity=0.115 Sum_probs=122.9
Q ss_pred HHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc
Q 022127 126 GYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY 205 (302)
Q Consensus 126 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (302)
+.......+|.+.++ +|.|+.+.+...+...++..++.++.|+++||+|||+. ...+..+..++......
T Consensus 6 ~~~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~---------~~~~~~~~~i~~~~~~~ 75 (377)
T PRK11102 6 AIDMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPV---------ILGGTLVFALAAVACAL 75 (377)
T ss_pred HHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHH---------HHHHHHHHHHHHHHHHH
Confidence 334455777888877 89999999999999999999999999999999997632 23455555555555555
Q ss_pred ccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHH
Q 022127 206 AKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGL 284 (302)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~ 284 (302)
.++.+.......+.+.+.+...+.......|..| ++|+++.++.+....+|..++|.+.+.+.+..+ |+..+.+.+..
T Consensus 76 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~ 154 (377)
T PRK11102 76 AQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFS-WHAIFWVLALA 154 (377)
T ss_pred HccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-hHHHHHHHHHH
Confidence 5666655555556566666666677788888887 789999999999999999999999999998776 99999888777
Q ss_pred HHHHHHHHHhh
Q 022127 285 YFVTTIFWNLY 295 (302)
Q Consensus 285 ~~~~~~~~~~~ 295 (302)
.++..+.....
T Consensus 155 ~~~~~~~~~~~ 165 (377)
T PRK11102 155 AILAAALVFFF 165 (377)
T ss_pred HHHHHHHHHHh
Confidence 77665554433
No 158
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.50 E-value=2.8e-13 Score=113.03 Aligned_cols=165 Identities=11% Similarity=0.024 Sum_probs=123.7
Q ss_pred HHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHH
Q 022127 120 NITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVS 199 (302)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (302)
++..+.....+....|.+. +++|.|..+.+++.+...++..++.++.|+++||+|||+.. ..+..+..++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~---------~~~~~~~~~~ 73 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLV-EEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFL---------PIGLILCAIV 73 (379)
T ss_pred hhHHHHhHHhhhhhhHHHH-HHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehh---------HHHHHHHHHH
Confidence 3444555556666677544 45999999999999999999999999999999999987543 2455555555
Q ss_pred HHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHH-HhhhhhccccchhHH
Q 022127 200 LLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTI-GTGYFVQWLGSFQAF 277 (302)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~-i~g~l~~~~g~~~~~ 277 (302)
.++....++.+...+...+.+.+.+...+...+...|..| ++|+++.++.+....+|..++|. +.+.+.+..+ |+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~ 152 (379)
T TIGR00881 74 NLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYS-WHWV 152 (379)
T ss_pred HHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCC-chhH
Confidence 5555566666666666666666667777888888889888 78999999999999999999994 6666666554 8888
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 022127 278 LTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~ 295 (302)
+.+.+.+.++..++...+
T Consensus 153 ~~~~~~~~~~~~~~~~~~ 170 (379)
T TIGR00881 153 FIVPGIIAIIVSLICFLL 170 (379)
T ss_pred HHHHHHHHHHHHHHHhee
Confidence 888777666655544443
No 159
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.49 E-value=2.9e-12 Score=108.08 Aligned_cols=159 Identities=14% Similarity=-0.000 Sum_probs=115.8
Q ss_pred HHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcc
Q 022127 127 YFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA 206 (302)
Q Consensus 127 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (302)
...+...+|.+.++ +|.|+.+.+...+...++..++.++.|.++||+|||+.. ..+.....++.......
T Consensus 29 ~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l---------~~~~~~~~~~~~~~~~~ 98 (406)
T PRK15402 29 NDMIQPGMLAVVED-FNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVM---------LAGVAFFILTCLAILLA 98 (406)
T ss_pred hhhHhcchHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH---------HHHHHHHHHHHHHHHHH
Confidence 33444556665555 999999999999999999999999999999999986321 24444445555555555
Q ss_pred cchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHH
Q 022127 207 KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLY 285 (302)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~ 285 (302)
++.+.......+.+...+...+.......|..| +++++..++......++..++|.+.+.+.++.+ |+..+++.+++.
T Consensus 99 ~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~-w~~~~~~~~~~~ 177 (406)
T PRK15402 99 QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP-WRGMFVLFAALA 177 (406)
T ss_pred ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHH
Confidence 666555555555555555555566677778777 778888999888888999999999999988765 999998888777
Q ss_pred HHHHHHHHhhc
Q 022127 286 FVTTIFWNLYS 296 (302)
Q Consensus 286 ~~~~~~~~~~~ 296 (302)
++..+......
T Consensus 178 ~~~~~~~~~~~ 188 (406)
T PRK15402 178 ALSFFGLWRAM 188 (406)
T ss_pred HHHHHHHHHhC
Confidence 77665544433
No 160
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.49 E-value=2.9e-12 Score=108.24 Aligned_cols=172 Identities=13% Similarity=0.205 Sum_probs=123.3
Q ss_pred cHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhh-----hhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHH
Q 022127 112 PSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQ-----AAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRK 186 (302)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-----~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~ 186 (302)
.+....+..++..........++|.|.++ +|.+..+ .+...+...+...++.++.|+++||+|||+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~------- 86 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVEQ-LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIM------- 86 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHH-hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHH-------
Confidence 44455666667777777778889999987 8888654 3778888899999999999999999997632
Q ss_pred HHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhh
Q 022127 187 IMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTG 265 (302)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g 265 (302)
+ ..+.....+........++.+.......+.+...+ ..+.......+..| ++|+++.|..+....+|..++|.+.+
T Consensus 87 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 163 (408)
T PRK09874 87 -L-LRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGG 163 (408)
T ss_pred -H-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 23444444444444445555554444444444333 34445556666666 88999999999999999999999999
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHHhh
Q 022127 266 YFVQWLGSFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 266 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
.+.+..+ |+..+.+.+++.++..+...++
T Consensus 164 ~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 192 (408)
T PRK09874 164 LLADSYG-LRPVFFITASVLFLCFLVTLFC 192 (408)
T ss_pred HHHHHhC-HHHHHHHHHHHHHHHHHHHHHH
Confidence 9988776 9999988887777666554443
No 161
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.49 E-value=4.6e-12 Score=106.47 Aligned_cols=169 Identities=12% Similarity=0.011 Sum_probs=118.8
Q ss_pred HHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhh
Q 022127 116 VIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIG 195 (302)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 195 (302)
......+...........+|.+.++ +|.|+.+.+...+...++..++.++.|+++||+|||+.. ..+...
T Consensus 13 ~~~~~~~~~~~~~~~~p~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~---------~~~~~~ 82 (394)
T PRK11652 13 LVLLVAVGQMAQTIYVPAIADMARD-LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVI---------LVGMSI 82 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH---------HHHHHH
Confidence 3334444444444455566776666 899999999999999999999999999999999986422 234444
Q ss_pred hHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccch
Q 022127 196 PGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSF 274 (302)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~ 274 (302)
..++.......++.+.......+.+.+.+...+.......|..+ ++++.+.+..+....++..++|.+.+.+.+..| |
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~ 161 (394)
T PRK11652 83 FILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFG-W 161 (394)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-h
Confidence 44444444455565555555555554444444455556677666 788999999999999999999999999988776 9
Q ss_pred hHHHHHHHHHHHHHHHHHHhh
Q 022127 275 QAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~ 295 (302)
+..|.+.++..++..+.....
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~~ 182 (394)
T PRK11652 162 RACYLFLLLLGAGVTFSMARW 182 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999988777665554443333
No 162
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.48 E-value=4.2e-15 Score=127.64 Aligned_cols=268 Identities=18% Similarity=0.122 Sum_probs=0.0
Q ss_pred CchhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhc----------------------CCchHHHHHHHH
Q 022127 1 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI----------------------GISGPFILFSSL 58 (302)
Q Consensus 1 ~p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~----------------------gwr~~f~~~~~~ 58 (302)
|+...+|+-|..++++-+..+|+..+...+|+++|..+++.+.+.+ .|...|.+.+.+
T Consensus 159 ~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~ 238 (539)
T PF03137_consen 159 YTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGIL 238 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 4667899999999999999999999999999999999998876421 388888888888
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCCh---HHHHH---HHhcCccc--------ccCCCCcchHHhhcCccHHHHHHHHHhhh
Q 022127 59 GLLWLSTWTSKVTNDPCNSPFVSK---SELRL---IQAGKSDS--------VKKRNPPSLRHLLSKLPSWTVIIANITNN 124 (302)
Q Consensus 59 ~~~~~~~~~~~~~~~p~~~~~~~~---~~~~~---~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (302)
.++..+....+-++-|++++..++ ++++. .+++..++ ..++.+...+++++||.+....+......
T Consensus 239 ~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~ 318 (539)
T PF03137_consen 239 LFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFES 318 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 887777666644444443111100 00000 00000000 11233456778999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHH-HHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHH-HHHH
Q 022127 125 WGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWG-TMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGV-SLLC 202 (302)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 202 (302)
....++.++.|.|++.+++.++.+++.+.....+ +.++|.+++|++.+|++-+.... .+.......+.... ....
T Consensus 319 ~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~---~~~~~v~~~v~~~~~~~~~ 395 (539)
T PF03137_consen 319 FIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGA---AKFCIVVSIVSVILYSPLF 395 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988765554 67788899999999986543221 12221222221111 0010
Q ss_pred hhccc-------------------------------------------------chHHHHHHHHHHHHHhhhhhhhhhhH
Q 022127 203 LNYAK-------------------------------------------------SPAVAAVLITIALSLSSFSQAGYLLN 233 (302)
Q Consensus 203 ~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (302)
+..-+ ......+...+..+..+....+....
T Consensus 396 ~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i 475 (539)
T PF03137_consen 396 FLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLI 475 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchhee
Confidence 00000 00111222222222333333333333
Q ss_pred Hhh-hccchhhhHHHHHHHHHH-HHHHHHHHHhhhhhccc
Q 022127 234 IQE-IAPDCAGFLHGIANSAGT-LAAIISTIGTGYFVQWL 271 (302)
Q Consensus 234 ~~~-~~p~~~~~~~g~~~~~~~-~g~~i~~~i~g~l~~~~ 271 (302)
... +.+++|+.+.|+...+.+ +|..-+|.+.|.+.|..
T Consensus 476 ~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 476 TLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp ----------------------------------------
T ss_pred eeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 333 445999999999987766 57889999999999974
No 163
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.48 E-value=5.1e-12 Score=105.67 Aligned_cols=150 Identities=9% Similarity=-0.079 Sum_probs=117.7
Q ss_pred ccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHH
Q 022127 111 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS 190 (302)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 190 (302)
+.++.+.+..+............+|.+.++ +|.|..+.|+..+...++..++.++.|+++||+|+|+. ..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~---------~~ 75 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRS---------YY 75 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH---------HH
Confidence 457778888888888888888999999987 89999999999999999999999999999999997632 23
Q ss_pred HhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhc
Q 022127 191 IGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ 269 (302)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~ 269 (302)
.+.++..++.......++.+.......+.+.+.+...+.......+..+ ++|+++.|..+...++|..++|.+.+.+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 155 (381)
T PRK03633 76 LASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVST 155 (381)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 4555555555555566676666665555555555555555555555555 889999999999999999999999999876
Q ss_pred c
Q 022127 270 W 270 (302)
Q Consensus 270 ~ 270 (302)
.
T Consensus 156 ~ 156 (381)
T PRK03633 156 E 156 (381)
T ss_pred c
Confidence 5
No 164
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.48 E-value=9.7e-13 Score=112.92 Aligned_cols=160 Identities=11% Similarity=0.007 Sum_probs=114.8
Q ss_pred HHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHH----
Q 022127 126 GYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLL---- 201 (302)
Q Consensus 126 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 201 (302)
....+....|.+.++ +|.|..+.|++.+...++..++.++.|+++||+|+|+... .+.+..++..+
T Consensus 44 ~r~~~~~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~---------~~~~~~~~~~~~~~~ 113 (467)
T PRK09556 44 IRKNFKAAQNDMIST-YGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLP---------FLLILSAICMLGFGA 113 (467)
T ss_pred HhcChhhhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHH---------HHHHHHHHHHHHHHH
Confidence 333455557766655 9999999999999999999999999999999999875431 22222222222
Q ss_pred -HhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccc--cchhHH
Q 022127 202 -CLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWL--GSFQAF 277 (302)
Q Consensus 202 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~--g~~~~~ 277 (302)
.....++.+.......+.+.+.+...+.....+.+..| ++||+++|+.+...++|.++++.+..++.+.. ++|+..
T Consensus 114 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~ 193 (467)
T PRK09556 114 SLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGM 193 (467)
T ss_pred HHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhH
Confidence 22234566666666666666667777777888888887 78999999999999999999999887776542 247777
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 022127 278 LTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~ 295 (302)
|.+.++..++..++.+++
T Consensus 194 f~~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 194 FIFPSIIALIIGFIGLRY 211 (467)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 777666665554444443
No 165
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.47 E-value=7.1e-12 Score=105.78 Aligned_cols=153 Identities=13% Similarity=0.049 Sum_probs=115.1
Q ss_pred HhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchH
Q 022127 131 LSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPA 210 (302)
Q Consensus 131 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (302)
..-+|...+ .+|.+..+.+...+...++..++.++.|.++||+|||+.. ..+..+..++.......++.+
T Consensus 36 ~p~l~~i~~-~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l---------~~~~~~~~~~~~~~~~a~~~~ 105 (413)
T PRK15403 36 QPGIINVVR-DFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVL---------ITGALIFTLACAATLFTTSMT 105 (413)
T ss_pred ccCHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHH---------HHHHHHHHHHHHHHHHcCCHH
Confidence 344455444 4899999999999999999999999999999999987322 244555555555555666766
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHH
Q 022127 211 VAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTT 289 (302)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~ 289 (302)
.......+.+.+.+...+.......|..| +++++..++.+....++..++|.+.+.+.++.| |+..|++.++..+++.
T Consensus 106 ~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~g-w~~~f~~~~~~~~i~~ 184 (413)
T PRK15403 106 QFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVH-WKVLFAIIAVMGLIAF 184 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHH
Confidence 66555555555444444455666778877 778999999999999999999999999988766 9999999888777766
Q ss_pred HHHHh
Q 022127 290 IFWNL 294 (302)
Q Consensus 290 ~~~~~ 294 (302)
+....
T Consensus 185 ~~~~~ 189 (413)
T PRK15403 185 VGLLL 189 (413)
T ss_pred HHHHH
Confidence 55443
No 166
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.47 E-value=7.8e-12 Score=108.35 Aligned_cols=163 Identities=12% Similarity=0.059 Sum_probs=121.3
Q ss_pred HHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHh
Q 022127 113 SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIG 192 (302)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 192 (302)
+..+.+..+.............|.+.++ +|.|+.+.+...+...++..++.++.|+++||+|||+. + ..+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~--------~-~~~ 91 (496)
T PRK03893 22 FSAAWLGYLLDGFDFVLITLVLTEVQGE-FGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLA--------M-VIS 91 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH--------H-HHH
Confidence 3455555555555555566666765555 99999999999999999999999999999999997632 2 244
Q ss_pred hhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 022127 193 FIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWL 271 (302)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~ 271 (302)
.++..++.......++.+.......+.+.+.+...+.......|..| ++|+++.++.+...++|..++|.+.+.+.+..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 171 (496)
T PRK03893 92 IVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVW 171 (496)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 44555555555555666655555556666566666777777888887 88999999999999999999999999999887
Q ss_pred cchhHHHHHHHHHHH
Q 022127 272 GSFQAFLTVTAGLYF 286 (302)
Q Consensus 272 g~~~~~~~~~~~~~~ 286 (302)
+ |+..|.+.....+
T Consensus 172 ~-w~~~f~~~~~~~~ 185 (496)
T PRK03893 172 G-WRALFFIGILPII 185 (496)
T ss_pred C-HHHHHHHHHHHHH
Confidence 6 9988876544333
No 167
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.47 E-value=1.2e-11 Score=105.81 Aligned_cols=153 Identities=14% Similarity=0.069 Sum_probs=102.9
Q ss_pred HhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcc----
Q 022127 131 LSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA---- 206 (302)
Q Consensus 131 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 206 (302)
....| ++++. |.|..+.++..+...++..++.++.|+++||+|+|+.. ..+.++.++..+.....
T Consensus 49 ~~~~p-~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l---------~~~~~~~~i~~~~~~~~~~~~ 117 (452)
T PRK11273 49 ALAMP-YLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL---------PAGLILAAAVMLFMGFVPWAT 117 (452)
T ss_pred HHhhH-HHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhH---------HHHHHHHHHHHHHHHhhhccc
Confidence 34555 55665 99999999999999999999999999999999987432 24444444444433332
Q ss_pred cchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHH-HHHHhhhhhccccchhHHHHHHHHH
Q 022127 207 KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAII-STIGTGYFVQWLGSFQAFLTVTAGL 284 (302)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i-~~~i~g~l~~~~g~~~~~~~~~~~~ 284 (302)
.+.+.......+.+.+.+...+.......+..| ++|+++.|+.+...++|+.+ +|.+...+.... +|+..|++.++.
T Consensus 118 ~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~-gw~~~f~i~~~~ 196 (452)
T PRK11273 118 SSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFN-DWHAALYMPAFA 196 (452)
T ss_pred ccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhc-cHHHHHHHHHHH
Confidence 234444444445555556555666666677666 88999999999999988754 454433333233 599999988777
Q ss_pred HHHHHHHHHhh
Q 022127 285 YFVTTIFWNLY 295 (302)
Q Consensus 285 ~~~~~~~~~~~ 295 (302)
.++..++..++
T Consensus 197 ~~~~~~l~~~~ 207 (452)
T PRK11273 197 AILVALFAFAM 207 (452)
T ss_pred HHHHHHHHHHH
Confidence 66655444443
No 168
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.46 E-value=1e-11 Score=104.62 Aligned_cols=162 Identities=12% Similarity=0.043 Sum_probs=110.7
Q ss_pred ccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHH
Q 022127 111 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS 190 (302)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 190 (302)
|.+....+..++..........++|.++++ +|.|+.+.+...+...++..++.++.|++.||+|||+.. .
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l---------~ 82 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTM---------M 82 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH---------H
Confidence 455666777777777777777788888876 899999999999999999999999999999999986322 2
Q ss_pred HhhhhhHHHHHHh---hcc-cchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHH-HHHHHHh
Q 022127 191 IGFIGPGVSLLCL---NYA-KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAA-IISTIGT 264 (302)
Q Consensus 191 ~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~-~i~~~i~ 264 (302)
.+..+..++.... ... ++.+.......+.+.+.+...+.......+..| ++|++++|+.+...++|. .++|.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~ 162 (402)
T TIGR00897 83 IGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYS 162 (402)
T ss_pred HHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333332221 222 244433333344333333333444455556555 899999999999999986 5899999
Q ss_pred hhhhccccchhHHHHHHHH
Q 022127 265 GYFVQWLGSFQAFLTVTAG 283 (302)
Q Consensus 265 g~l~~~~g~~~~~~~~~~~ 283 (302)
+.+.+..| ++..++....
T Consensus 163 ~~l~~~~g-~~~~~~~~~~ 180 (402)
T TIGR00897 163 SYAIPAFG-EMNTLWSALA 180 (402)
T ss_pred Hhcccccc-hHHHHHHHHH
Confidence 99888776 5444444333
No 169
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.46 E-value=6.5e-12 Score=106.72 Aligned_cols=161 Identities=11% Similarity=0.032 Sum_probs=119.6
Q ss_pred HHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHh
Q 022127 113 SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIG 192 (302)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 192 (302)
+....+..+.............|.+. +++|.|+.+.++..+...++..++.++.|+++||+|||+. ...+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~---------l~~~ 89 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYLIK-ADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPL---------MMWS 89 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH---------HHHH
Confidence 34444444444444445555555544 4599999999999999999999999999999999997632 2345
Q ss_pred hhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 022127 193 FIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWL 271 (302)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~ 271 (302)
.....++.......++.+...+...+.+.+.+...+.......|..| ++|+++.++......+|..+++.+.+.+.+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~ 169 (426)
T PRK12307 90 IVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY 169 (426)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC
Confidence 55555555555566666666666666666666667777778888887 78999999999999999999999999988877
Q ss_pred cchhHHHHHHHHH
Q 022127 272 GSFQAFLTVTAGL 284 (302)
Q Consensus 272 g~~~~~~~~~~~~ 284 (302)
+ |+..|++....
T Consensus 170 ~-w~~~f~i~~~~ 181 (426)
T PRK12307 170 G-WRAAFFVGLLP 181 (426)
T ss_pred C-HHHHHHHHHHH
Confidence 5 99998875443
No 170
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.45 E-value=8.7e-12 Score=104.29 Aligned_cols=165 Identities=10% Similarity=-0.008 Sum_probs=116.4
Q ss_pred HHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHh
Q 022127 113 SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIG 192 (302)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 192 (302)
.+.+.+..+..+........++|.|+++ +|.|..+.|...+...+...++.++.|.++||.+|+... ++... .+
T Consensus 6 ~~~l~~~~~~~~~~~~~~~p~l~~~l~~-~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~----~~~~~-~~ 79 (382)
T TIGR00902 6 FRWLALGFFGYFCAYGIFLPFFPAWLKG-IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIA----LRLLA-LA 79 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH----HHHHH-HH
Confidence 3446666777777777788999999988 899999999999999999999999999999999864221 22221 12
Q ss_pred hhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 022127 193 FIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 272 (302)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g 272 (302)
..+... ......++.+.......+.+.+.+...+...+...+. ++++++..|......++|..++|.+.|.+.++.|
T Consensus 80 ~~l~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~-~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g 156 (382)
T TIGR00902 80 SAIFAA--AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW-QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFD 156 (382)
T ss_pred HHHHHH--HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH-HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 111111 1222344555554444444444444455555555443 4778999999999999999999999999999887
Q ss_pred chhHHHHHHHHHHHH
Q 022127 273 SFQAFLTVTAGLYFV 287 (302)
Q Consensus 273 ~~~~~~~~~~~~~~~ 287 (302)
|+..|.+.....++
T Consensus 157 -~~~~f~~~~~~~~~ 170 (382)
T TIGR00902 157 -EQNILAILTAGLAF 170 (382)
T ss_pred -hhHHHHHHHHHHHH
Confidence 99888876655333
No 171
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.45 E-value=1.2e-11 Score=103.81 Aligned_cols=178 Identities=14% Similarity=0.042 Sum_probs=118.1
Q ss_pred ccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHH
Q 022127 111 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS 190 (302)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 190 (302)
|.++...+.........+......+.+-++.+|+|+.|.+++.+...+...+.++..|++.||+|.|+.. .
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~---------~ 104 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWT---------V 104 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH---------H
Confidence 4566666665555555555556566666646999999999999999999999999999999999986322 2
Q ss_pred HhhhhhHHHHHHhhcc-----cchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHh
Q 022127 191 IGFIGPGVSLLCLNYA-----KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGT 264 (302)
Q Consensus 191 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~ 264 (302)
.+.++..+..+...+. ++.+...+...+.+.. +..++.....+++.+| ++||++.|+....+++|..+++.+.
T Consensus 105 ~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~ 183 (462)
T PRK15034 105 FSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVA 183 (462)
T ss_pred HHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHH
Confidence 3444444444444433 4555555555555544 5566777777888888 7799999999777777776665555
Q ss_pred hhhh-----cccc------------chhHHHHHHHHHHHHHHHHHHhhccC
Q 022127 265 GYFV-----QWLG------------SFQAFLTVTAGLYFVTTIFWNLYSTG 298 (302)
Q Consensus 265 g~l~-----~~~g------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (302)
..+. +..| .++.+..+.....++..++.+++.++
T Consensus 184 p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~ 234 (462)
T PRK15034 184 PLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMND 234 (462)
T ss_pred HHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4432 2111 15666666666666666555554443
No 172
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.44 E-value=4.6e-12 Score=108.22 Aligned_cols=155 Identities=10% Similarity=0.110 Sum_probs=112.7
Q ss_pred HHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccch
Q 022127 130 LLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSP 209 (302)
Q Consensus 130 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (302)
+..+.|.+.++ +|.+..+.++..+...+...++.++.|+++||+++|+.. ..+.++..+..+.....++.
T Consensus 38 ~~~~~~~i~~~-~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l---------~~~~~~~~~~~~~~~~~~~~ 107 (455)
T TIGR00892 38 VTVFFKELQQI-FQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVV---------IAGGLLASLGMILASFSSNV 107 (455)
T ss_pred hhhhHHHHHHH-hCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHH---------HhhHHHHHHHHHHHHHhhhH
Confidence 44567766665 899999999999998888899999999999999987422 24444444455555555555
Q ss_pred HHHHHHH-HHHHHHhhhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHH
Q 022127 210 AVAAVLI-TIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVT 288 (302)
Q Consensus 210 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~ 288 (302)
+...... .+.+.+.+...++......+.+|++|+++.|+.+....+|..++|.+.+.+.+..| |+..|++.+++.++.
T Consensus 108 ~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g-wr~~f~~~~~~~~~~ 186 (455)
T TIGR00892 108 IELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG-WRGSFLILGGLLLHC 186 (455)
T ss_pred HHHHHHHHHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHH
Confidence 4433222 33333344434455566677778889999999999999999999999999998876 999999998877766
Q ss_pred HHHHHhh
Q 022127 289 TIFWNLY 295 (302)
Q Consensus 289 ~~~~~~~ 295 (302)
.+..++.
T Consensus 187 ~v~~~~~ 193 (455)
T TIGR00892 187 CVCGALM 193 (455)
T ss_pred HHHHHHh
Confidence 5544444
No 173
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.44 E-value=6.8e-12 Score=105.49 Aligned_cols=176 Identities=12% Similarity=0.036 Sum_probs=116.5
Q ss_pred CccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHH
Q 022127 110 KLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQ 189 (302)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 189 (302)
||.+|......++.+.+......++|.|+++++|.|+.+.+...+...+...++.+..|+++||+|||+.. +.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~-------~~ 73 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHL-------LW 73 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH-------HH
Confidence 57889999999999999999999999999988999999999999999999999999999999999987432 11
Q ss_pred H-HhhhhhHHHHHHhhcccc----hHH-HHHHHHHHHHHhhhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHH
Q 022127 190 S-IGFIGPGVSLLCLNYAKS----PAV-AAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIG 263 (302)
Q Consensus 190 ~-~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i 263 (302)
. ....+...........+. ... ......+.+...+...+.......+.. ++++...|......++|..++|.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~ 152 (396)
T TIGR00882 74 IISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS-RNSNFEYGKARMFGCVGWALCASI 152 (396)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh-hhcccccchhhhhcccHHHHHHHH
Confidence 1 111111111111111111 111 111111222222323333333333332 334556778888889999999999
Q ss_pred hhhhhccccchhHHHHHHHHHHHHHHHHHHhh
Q 022127 264 TGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 264 ~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
.|.+.+. + |+..|++.+.+.++..++.+..
T Consensus 153 ~g~l~~~-~-~~~~f~~~~~~~~~~~~~~~~~ 182 (396)
T TIGR00882 153 AGILFSI-D-PQIVFWLGSGFALILMLLLMFA 182 (396)
T ss_pred Hhhhhcc-C-chHHHHHHHHHHHHHHHHHHHh
Confidence 9988764 4 8899988877777665554443
No 174
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.43 E-value=1.5e-11 Score=105.66 Aligned_cols=186 Identities=15% Similarity=0.133 Sum_probs=138.8
Q ss_pred HhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHH
Q 022127 106 HLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVR 185 (302)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~ 185 (302)
.-+|||.+..+.......+.+......-.+-++.+ ..-|+...++......+...+.++++|.++||+.||+......
T Consensus 5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~-lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~- 82 (524)
T PF05977_consen 5 APLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ-LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQ- 82 (524)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH-
Confidence 35789999999999999888888887777777766 5678999999999999999999999999999999875432100
Q ss_pred HHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHh
Q 022127 186 KIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGT 264 (302)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~ 264 (302)
.+ .......+..+......+.+..+...++.+.+..+..|..++.+.++.| ++...++++.+...++...+||.++
T Consensus 83 -~~--~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalg 159 (524)
T PF05977_consen 83 -LL--RALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALG 159 (524)
T ss_pred -HH--HHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHH
Confidence 00 0011111111112222356666666677777788888999999999988 7889999999999999999999999
Q ss_pred hhhhccccchhHHHHHHHHHHHHHHHHHHhhcc
Q 022127 265 GYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYST 297 (302)
Q Consensus 265 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (302)
|.+....| ....|.+-++..++........++
T Consensus 160 G~Lva~~G-~~~~f~inalsfl~~i~~l~~~~~ 191 (524)
T PF05977_consen 160 GILVAFFG-AAAAFLINALSFLISILALLRWKP 191 (524)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHccc
Confidence 99998876 777888877777666555444443
No 175
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.42 E-value=1.5e-11 Score=102.90 Aligned_cols=161 Identities=13% Similarity=0.035 Sum_probs=113.1
Q ss_pred HHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHH
Q 022127 120 NITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVS 199 (302)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (302)
.+....+......++|.|+++ +|.|..+.|...+...+...++.++.|.++||++|+... ++.+... .... .
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~----~~~~~~~-~~~~--~ 84 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPA----LRLLALL-TLLF--A 84 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHH----HHHHHHH-HHHH--H
Confidence 555556667778899999988 899999999999999999999999999999999985221 2222211 1111 1
Q ss_pred HHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHH
Q 022127 200 LLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLT 279 (302)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~ 279 (302)
.......++.+.......+.+.+.+...+...+...+. +++++++.|......++|..++|.+++.+.++.| |+..|+
T Consensus 85 ~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g-~~~~f~ 162 (382)
T PRK11128 85 VAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFG-EQAILW 162 (382)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcC-hhHHHH
Confidence 22222234555544444444444555555555555554 4567888888888999999999999999999887 999988
Q ss_pred HHHHHHHHHHH
Q 022127 280 VTAGLYFVTTI 290 (302)
Q Consensus 280 ~~~~~~~~~~~ 290 (302)
+.++..++..+
T Consensus 163 ~~~~~~~~~~~ 173 (382)
T PRK11128 163 ILTAGVASMLL 173 (382)
T ss_pred HHHHHHHHHHH
Confidence 77765554443
No 176
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.41 E-value=5.2e-12 Score=106.17 Aligned_cols=258 Identities=16% Similarity=0.116 Sum_probs=181.3
Q ss_pred hhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCh
Q 022127 3 AMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSK 82 (302)
Q Consensus 3 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 82 (302)
...++++|....++|....|+.+.....+..++|.+++.+.+..|.-..|.+..+..++..+.....+||+-.+++..+.
T Consensus 132 ~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~ 211 (463)
T KOG2816|consen 132 VGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDA 211 (463)
T ss_pred hhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccc
Confidence 46788999999999999999999999999999999999999999999999999998888888888888886554332210
Q ss_pred HHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHh-hhhHHHHHhhccchhhhhHHhhHHHHHHH
Q 022127 83 SELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLS-WMPIYFNTVFNVNLKQAAWFSAVPWGTMA 161 (302)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ 161 (302)
..++........+...+.....++.-.+|..+.+.+..+........-.. ..+.|++..+++++.+.+.+.+.......
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~ 291 (463)
T KOG2816|consen 212 TLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGI 291 (463)
T ss_pred cccccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHH
Confidence 00000000000000000111111222345566656665555554443222 45778888899999999999998888899
Q ss_pred hhhhhhh-cccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-
Q 022127 162 VSGYMAG-KASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP- 239 (302)
Q Consensus 162 ~~~~~~g-~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p- 239 (302)
++..+.. .+...++.++ ....++..-.+......+.++.|.......+. .......+...+..+...+
T Consensus 292 i~~l~~~~~l~~~l~~~~---------~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~-~~~~~~~pa~~s~~s~~v~~ 361 (463)
T KOG2816|consen 292 ISQLLLLPLLSSILGEKR---------LISLGLLSEFLQLLLFAFATETWMMFAAGVVV-ALAGIVFPAIRAFASILVSP 361 (463)
T ss_pred HHHHHHHHHHHHHHhhhh---------HhhHHHHHHHHHHHHHHHhccchhhhHHHHHH-HhhcchhHHHHhHHHhhccc
Confidence 9887666 6666777542 33577777777777777777776644443333 3455566777777777665
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 022127 240 DCAGFLHGIANSAGTLAAIISTIGTGYFVQW 270 (302)
Q Consensus 240 ~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~ 270 (302)
+++|++.++...+..+.+.++|.+.+.+...
T Consensus 362 ~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 362 EEQGKVFGIISGIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred ccccchhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence 9999999999999999999999999988643
No 177
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.41 E-value=3.2e-11 Score=100.02 Aligned_cols=159 Identities=14% Similarity=0.025 Sum_probs=121.3
Q ss_pred HhhhhHHHHHhhccchhh-hhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccch
Q 022127 131 LSWMPIYFNTVFNVNLKQ-AAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSP 209 (302)
Q Consensus 131 ~~~~~~~~~~~~g~s~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (302)
..+...++.+.+|++..+ .|.+.+....+..+..+.+|+++||+|.|+ ++..+.+...+...+..+.++.
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~---------vL~l~~l~Wsl~t~L~~fa~Sl 115 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKP---------VLVLQALSFVCVWLLLLLGTSV 115 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchH---------HHHHHHHHHHHHHHHHHHHHHH
Confidence 344444666679999999 999999999999999999999999999753 2235566666666666666666
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc--chhHHHHHHHHHHH
Q 022127 210 AVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG--SFQAFLTVTAGLYF 286 (302)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g--~~~~~~~~~~~~~~ 286 (302)
....+.-++.+.+.+... ....++...+| ++|++++|..+....+|.++++++.+++. ..| +|....++..+...
T Consensus 116 ~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~gWr~y~~Ln~Isl~s~~ 193 (511)
T TIGR00806 116 WHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TLGWISYSTLNIISLVFMT 193 (511)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHHHHH
Confidence 666677777777777766 77777777777 99999999999999999999999999944 444 24445566666677
Q ss_pred HHHHHHHhhccCcc
Q 022127 287 VTTIFWNLYSTGER 300 (302)
Q Consensus 287 ~~~~~~~~~~~~~~ 300 (302)
++.++.+++++.+|
T Consensus 194 ~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 194 FSVFLALFLKRPKR 207 (511)
T ss_pred HHHHHHHhCCCCch
Confidence 77777777765544
No 178
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.41 E-value=1.2e-11 Score=107.18 Aligned_cols=177 Identities=18% Similarity=0.190 Sum_probs=132.7
Q ss_pred CchhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhc-------------------CCchHHHHHHHHHHH
Q 022127 1 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-------------------GISGPFILFSSLGLL 61 (302)
Q Consensus 1 ~p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-------------------gwr~~f~~~~~~~~~ 61 (302)
+|-..+|+-|...+++-+..+|+..+...+|+++|-++++++.+.+ .|..-|++.+.+.++
T Consensus 255 ~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~ 334 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLF 334 (735)
T ss_pred ccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHH
Confidence 4667889999999999999999999999999999999999987532 388888888888888
Q ss_pred HHHHHHhhhcCCCCCCCCCChHHHHHHHhcCc--cccc------CCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhh
Q 022127 62 WLSTWTSKVTNDPCNSPFVSKSELRLIQAGKS--DSVK------KRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSW 133 (302)
Q Consensus 62 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (302)
..+..+++-++.|++.++.+.++.+....+.+ ++++ ++.+...+++++||.+....+...+....+.++.++
T Consensus 335 ~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tF 414 (735)
T KOG3626|consen 335 SAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITF 414 (735)
T ss_pred HHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHh
Confidence 87777665444444332211111111111111 0100 122345678899999999999999999999999999
Q ss_pred hhHHHHHhhccchhhhhHHhhHHH-HHHHhhhhhhhcccchhhcc
Q 022127 134 MPIYFNTVFNVNLKQAAWFSAVPW-GTMAVSGYMAGKASDSLIKA 177 (302)
Q Consensus 134 ~~~~~~~~~g~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~~~~ 177 (302)
+|.|+++++|.++..+..+..... .+..+|.+++|++..|+.-+
T Consensus 415 lPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 415 LPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred hHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 999999999999999999885554 45667778999999998655
No 179
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.38 E-value=6.7e-11 Score=99.69 Aligned_cols=167 Identities=11% Similarity=0.095 Sum_probs=118.8
Q ss_pred HHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchh-----hccCCchhHHHHHHHH
Q 022127 116 VIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSL-----IKAGYSLTLVRKIMQS 190 (302)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----~~~~~~~~~~~~~~~~ 190 (302)
....++.+.........-+|.|+++ .|+|.++.|++...... .+..+++|.++||+ ||| |+++ .
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~r-------r~~l-~ 72 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRR-------RGWL-L 72 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcc-------hhHH-H
Confidence 3455666677777777889999999 69999999998665544 58889999999999 655 2222 3
Q ss_pred HhhhhhHHHHHHhhcc---cchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhh
Q 022127 191 IGFIGPGVSLLCLNYA---KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGY 266 (302)
Q Consensus 191 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~ 266 (302)
.+....+++...+... .+.+.......+...+.....+...+...|..| |+|+++.++.....++|..+++.+.+.
T Consensus 73 ~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~ 152 (402)
T PRK11902 73 LTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALW 152 (402)
T ss_pred HHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHH
Confidence 4444444344333333 233333333334445556666777888888888 779999999999999999999999999
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHHH
Q 022127 267 FVQWLGSFQAFLTVTAGLYFVTTIFWN 293 (302)
Q Consensus 267 l~~~~g~~~~~~~~~~~~~~~~~~~~~ 293 (302)
+.+...+|+..|++.++..++..+...
T Consensus 153 l~~~~~gw~~~f~i~a~~~l~~~l~~~ 179 (402)
T PRK11902 153 LADRVLGWGNTYLLMAGLMLAGALTTL 179 (402)
T ss_pred HHhcccCHHHHHHHHHHHHHHHHHHHH
Confidence 988643499999988877766555433
No 180
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.38 E-value=8.7e-11 Score=98.94 Aligned_cols=170 Identities=12% Similarity=0.042 Sum_probs=122.7
Q ss_pred HHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHh
Q 022127 113 SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIG 192 (302)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 192 (302)
++.+....+.............|.+ ++++|.|..+.++..+...++..++++..|++.||+|+|+. ...+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~---------~~~g 74 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAG---------ILLG 74 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH---------HHHH
Confidence 4455555555555555555777766 55599999999999999999999999999999999997632 2355
Q ss_pred hhhhHHHHHHhhc---ccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 022127 193 FIGPGVSLLCLNY---AKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFV 268 (302)
Q Consensus 193 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~ 268 (302)
..+.+++...... .++.+.......+.+.+.+...+..+....+..| +++++..++.+...++|..++|.+.+.+.
T Consensus 75 ~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 75 LFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555544322 2355555556666666777777777777777777 77899999999999999999999998875
Q ss_pred ccc-------------------------cchhHHHHHHHHHHHHHHHHH
Q 022127 269 QWL-------------------------GSFQAFLTVTAGLYFVTTIFW 292 (302)
Q Consensus 269 ~~~-------------------------g~~~~~~~~~~~~~~~~~~~~ 292 (302)
... .+|+.+|.+.+++.++..++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 155 LSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred hcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 321 138888888777666554443
No 181
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.36 E-value=2e-11 Score=101.16 Aligned_cols=148 Identities=16% Similarity=0.070 Sum_probs=107.8
Q ss_pred HHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccch
Q 022127 130 LLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSP 209 (302)
Q Consensus 130 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (302)
....+|.+.++ +|.|+.+.++..+...++..++.+..|+++||+|+|+.. ..+.....++.... ..++.
T Consensus 19 ~~~~lp~l~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~---------~~~~~~~~~~~~~~-~~~~~ 87 (355)
T TIGR00896 19 VGPLLPQIRSA-LGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSV---------AAGLLLIAAGILIR-SAPGT 87 (355)
T ss_pred CcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHH---------HHHHHHHHHHHHHH-HhccH
Confidence 44567776666 899999999999999999999999999999999987432 23333333333333 34455
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhhccccc-hhHHHHHHHHHHHHH
Q 022127 210 AVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGS-FQAFLTVTAGLYFVT 288 (302)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~-~~~~~~~~~~~~~~~ 288 (302)
+.......+.+.+.+...+.......+..|++|+++.|..+...++|..+++.+.+.+.+..+. |+..|...++..++.
T Consensus 88 ~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 88 ALLFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLA 167 (355)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 5444444445555555455556667788888899999999999999999999999998876543 888887766554444
No 182
>PRK10133 L-fucose transporter; Provisional
Probab=99.35 E-value=1.7e-10 Score=98.09 Aligned_cols=147 Identities=12% Similarity=0.006 Sum_probs=110.8
Q ss_pred cHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHH
Q 022127 112 PSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSI 191 (302)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 191 (302)
.+..+.+..+...+.........|.+ ++.+|.|+.+.++..+...++..++.+..|++.||+|+|+. +..
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~---------l~~ 96 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAG---------IIT 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH---------HHH
Confidence 34555666666666777777888887 66699999999999999999999999999999999997632 234
Q ss_pred hhhhhHHHHHHh---hcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhh
Q 022127 192 GFIGPGVSLLCL---NYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYF 267 (302)
Q Consensus 192 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l 267 (302)
+..+..++.+.. ...++.........+.+.+.+...+..+....+..| +++....+..+....+|..++|.+++.+
T Consensus 97 g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 97 GLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555555554432 345566666666677777777777777777778777 4455678999999999999999887765
Q ss_pred h
Q 022127 268 V 268 (302)
Q Consensus 268 ~ 268 (302)
.
T Consensus 177 ~ 177 (438)
T PRK10133 177 I 177 (438)
T ss_pred H
Confidence 4
No 183
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.35 E-value=2e-10 Score=99.02 Aligned_cols=179 Identities=13% Similarity=0.067 Sum_probs=127.8
Q ss_pred HhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchh-----hccCCc
Q 022127 106 HLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSL-----IKAGYS 180 (302)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----~~~~~~ 180 (302)
+..++|+.+.+....+............+|.++++ .|.|..+.+.... ..... ++.+++|.++||+ |||+
T Consensus 7 ~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~~~-~~~~~-~~~~l~gpl~Dr~~~~~~Grrr-- 81 (491)
T PRK11010 7 RIFQQPNSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFFSL-VGQAY-VFKFLWSPLMDRYTPPFLGRRR-- 81 (491)
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHH-HHHHH-HHHHHHHHHHHcccccCCCCch--
Confidence 34566777778888888888888888889999988 6999999988632 23332 5789999999999 6652
Q ss_pred hhHHHHHHHHHhhhhhHHHHHHhhcc---cchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHH
Q 022127 181 LTLVRKIMQSIGFIGPGVSLLCLNYA---KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLA 256 (302)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g 256 (302)
.++ ..+.+...++.....+. ++.+.......+..++.+...+...+...|..| ++|+++.++......+|
T Consensus 82 -----~~l-l~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG 155 (491)
T PRK11010 82 -----GWL-LATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLA 155 (491)
T ss_pred -----HHH-HHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHH
Confidence 222 24444443443333232 234444444455555566666777888889887 88999999999999999
Q ss_pred HHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhh
Q 022127 257 AIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 257 ~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
..+++.+.+.+.++..+|+..|++.++..++..+..+..
T Consensus 156 ~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~ 194 (491)
T PRK11010 156 MLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLA 194 (491)
T ss_pred HHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999998843249999999888777665554443
No 184
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.35 E-value=8.7e-11 Score=111.60 Aligned_cols=184 Identities=11% Similarity=-0.007 Sum_probs=120.9
Q ss_pred HHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHH----HHHhhccc-hhhhhHHhhHHHHHHHhhhhhhhcccchhhccCC
Q 022127 105 RHLLSKLPSWTVIIANITNNWGYFVLLSWMPIY----FNTVFNVN-LKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGY 179 (302)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~g~s-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 179 (302)
+++++++++..+....++.....+....-++.+ +.+..+.+ ....++..+...+...+.++++|+++||++||+.
T Consensus 5 ~~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~ 84 (1140)
T PRK06814 5 LYLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKL 84 (1140)
T ss_pred hhhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHH
Confidence 456788888777777666665544332222222 22212221 2446777778889999999999999999998742
Q ss_pred chhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHH
Q 022127 180 SLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAI 258 (302)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~ 258 (302)
. +.+............. ....++.+..++..++.+.+.++..+...+.+.+..| ++++.++|+.++..++|..
T Consensus 85 ~-----~~~~~~~~~~~~~~~~-~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~ 158 (1140)
T PRK06814 85 A-----KILKFAEIGIAALAIY-GFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAIL 158 (1140)
T ss_pred H-----HHHHHHHHHHHHHHHH-HHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHH
Confidence 1 1111111111111121 1223566666777777777778888888999999887 8899999999999999999
Q ss_pred HHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhh
Q 022127 259 ISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 259 i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
+||.++|++.+..+ |+..|.......+++.++...+
T Consensus 159 igp~l~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 194 (1140)
T PRK06814 159 LGTIIGGLATISGN-FVILVALLMGIAVLGWLASLFI 194 (1140)
T ss_pred HHHHHHHHHHhccc-cHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999998875 8888755545445444444433
No 185
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.34 E-value=6.8e-11 Score=101.82 Aligned_cols=139 Identities=14% Similarity=-0.034 Sum_probs=100.9
Q ss_pred hhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc---ccchHHHHHHHHHHHHH
Q 022127 146 LKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY---AKSPAVAAVLITIALSL 222 (302)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 222 (302)
..+.++..+...++..++.++.|+++||+|||+. + ..+..+..++..+... ..+.+..++...+.+.+
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 140 (481)
T TIGR00879 70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKS--------L-LIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIG 140 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHH--------H-HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhh
Confidence 7899999999999999999999999999997632 2 2333334444333322 22333445555556666
Q ss_pred hhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHh---hhhhccccchhHHHHHHHHHHHHHHHHHHh
Q 022127 223 SSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGT---GYFVQWLGSFQAFLTVTAGLYFVTTIFWNL 294 (302)
Q Consensus 223 ~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~---g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 294 (302)
.+...+.......|..| ++|+++.++.+....+|..+++.+. +...+..+ |+..|.+.+...++..+...+
T Consensus 141 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-w~~~f~~~~~~~~~~~~~~~~ 215 (481)
T TIGR00879 141 VGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLG-WRIPLGLQLIPAGLLFLGLFF 215 (481)
T ss_pred hhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCcc-HHHHHHHHHHHHHHHHHHHhc
Confidence 66667777788888887 8899999999999999999999998 66555554 999999866665555444433
No 186
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.34 E-value=1.8e-10 Score=97.50 Aligned_cols=178 Identities=11% Similarity=0.044 Sum_probs=126.4
Q ss_pred HHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccch----hhccCCchhHHHHHH
Q 022127 113 SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDS----LIKAGYSLTLVRKIM 188 (302)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~~~~~~~~~~~~~~~ 188 (302)
+..+....+..++++.....+.+.|+++ +|.++...+.......+...+..++.|+++|| +|||+ ..
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRr--------p~ 76 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRR--------PF 76 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChH--------HH
Confidence 3455555666677777777888888877 99999999999999999999999999999995 88763 33
Q ss_pred HHHhhhhhHHHHHHhhcccch-----------------HHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chh--hhHHHH
Q 022127 189 QSIGFIGPGVSLLCLNYAKSP-----------------AVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCA--GFLHGI 248 (302)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~--~~~~g~ 248 (302)
+..+.....+.+.++.+.++. +..+..+.+..+......++..+++.|..| ++| +.+.+.
T Consensus 77 il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~ 156 (477)
T TIGR01301 77 IAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAY 156 (477)
T ss_pred HHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHH
Confidence 334444445555555443321 122233333444556666777888999888 443 679999
Q ss_pred HHHHHHHHHHHHHHHhhhh--hccc------------cchhHHHHHHHHHHHHHHHHHHhhccCc
Q 022127 249 ANSAGTLAAIISTIGTGYF--VQWL------------GSFQAFLTVTAGLYFVTTIFWNLYSTGE 299 (302)
Q Consensus 249 ~~~~~~~g~~i~~~i~g~l--~~~~------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (302)
.+...++|+.+++.+.+.. .+.. .+++..|++.+++.+++.++..+..+|+
T Consensus 157 ~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~ 221 (477)
T TIGR01301 157 FSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKEN 221 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence 9999999999999998865 1111 1478899998888888877776665553
No 187
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.34 E-value=3.1e-11 Score=85.81 Aligned_cols=135 Identities=16% Similarity=0.106 Sum_probs=99.5
Q ss_pred hhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhh
Q 022127 153 SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLL 232 (302)
Q Consensus 153 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (302)
.+...++..++.+..|++.||+++|+.. ..+.....+........++.+.......+.+...+...+....
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 74 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVL---------LVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAA 74 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHH---------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 3455678888999999999999876321 2343344444444444556555555556666666666777778
Q ss_pred HHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhcc
Q 022127 233 NIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYST 297 (302)
Q Consensus 233 ~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (302)
...|..| ++|++..++.+...+++..++|.+.+.+.+..+ |+..+.+.+...+++.+....+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 75 LIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLG-WRAPFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred HHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccc-hHHHHHHHHHHHHHHHHHHhhcCC
Confidence 8888887 889999999999999999999999999998765 888888888777777666555544
No 188
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.33 E-value=6.8e-13 Score=107.87 Aligned_cols=177 Identities=10% Similarity=0.008 Sum_probs=142.1
Q ss_pred HHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHh
Q 022127 113 SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIG 192 (302)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 192 (302)
...+.+.....+.-.+.+...++. .++.+|.++...|++.....+...+.++++|++.||+.|+++. .++
T Consensus 35 l~il~~vnlmny~Dr~~iagv~~~-v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~---------~vG 104 (493)
T KOG1330|consen 35 LVILCLVNLMNYADRYTIAGVLKE-VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVI---------AVG 104 (493)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhHH-HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEE---------eeH
Confidence 344455555555555555544433 3445899999999999999999999999999999999876543 466
Q ss_pred hhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 022127 193 FIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWL 271 (302)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~ 271 (302)
..+-.++.+...+....|...++-.+.+.+.....+...+.+.|.+| ++|++..++.+....+|+.+|-...+.+.+..
T Consensus 105 ~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~ 184 (493)
T KOG1330|consen 105 IFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT 184 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc
Confidence 66666666666666677777777778888888888899999999999 88999999999999999999999999999988
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhccCc
Q 022127 272 GSFQAFLTVTAGLYFVTTIFWNLYSTGE 299 (302)
Q Consensus 272 g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (302)
+.|+++|...+++.++..++..++.++.
T Consensus 185 ~~Wr~af~~~avl~vi~~~L~~~f~~eP 212 (493)
T KOG1330|consen 185 FWWRWAFRGSAVLGVIVGLLVFLFVREP 212 (493)
T ss_pred cceEEEEEeehHHHHHHHHHHHhhccCc
Confidence 8899999999999888887776665543
No 189
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.30 E-value=1.3e-10 Score=93.95 Aligned_cols=175 Identities=18% Similarity=0.177 Sum_probs=121.0
Q ss_pred cHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHH
Q 022127 112 PSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSI 191 (302)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 191 (302)
+++...+..... +..+.+..-+...+++++|+|+.|.+++.+...+.+.+.+++.|.+.||+|.|++. ..
T Consensus 15 ~L~~S~~af~v~-F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~---------~~ 84 (417)
T COG2223 15 NLWLSTLAFDVG-FMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWT---------IL 84 (417)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHH---------HH
Confidence 344444433333 33334333344444566999999999999999999999999999999999987543 24
Q ss_pred hhhhhHHHHHHhhccc---chHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhh
Q 022127 192 GFIGPGVSLLCLNYAK---SPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYF 267 (302)
Q Consensus 192 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l 267 (302)
+.++..+..+...+.. +.+..+ ...+..+..|.........+++.+| |++|.+.|+.. .+|+|..+...+...+
T Consensus 85 s~~l~~IP~~~~~~a~~~~~~~~ll-~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v 162 (417)
T COG2223 85 SMLLLLIPCLGLAFAVTYPSTWQLL-VIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLV 162 (417)
T ss_pred HHHHHHHHHHHHHHHccCCchHHHH-HHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHH
Confidence 4444444444444332 222322 2333334455566777778888888 88999999999 9999999999999988
Q ss_pred hccccc--hhHHHHHHHHHHHHHHHHHHhhccC
Q 022127 268 VQWLGS--FQAFLTVTAGLYFVTTIFWNLYSTG 298 (302)
Q Consensus 268 ~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (302)
....|. |+.+..+.....++..+..++..++
T Consensus 163 ~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d 195 (417)
T COG2223 163 AVAFGFLAWRNVAGIYVVALAIAAVLAWLGMND 195 (417)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 887763 8888888888888777776665544
No 190
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.30 E-value=1.7e-10 Score=98.39 Aligned_cols=172 Identities=16% Similarity=0.110 Sum_probs=112.5
Q ss_pred hhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHH
Q 022127 122 TNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLL 201 (302)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (302)
...........+++.|+.+.+|.|+.+.|.+.+...+...+..++.|+++||.++|.-. ||..+..+....+++..
T Consensus 10 ~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Gr----rr~~i~~~~~~~~i~~~ 85 (437)
T TIGR00792 10 GNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGK----FRPWLLIGAIPFSIVLV 85 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCC----cchhHHHhHHHHHHHHH
Confidence 34445556678889999988999999999999999999999999999999996544221 23333455555554444
Q ss_pred Hhhcccc------hHHHHHHHHHHHHHhhhhhhhhhhHHhhhc--cchhhhHHHHHHHHHHHHHHHHHHHhhhhhcc---
Q 022127 202 CLNYAKS------PAVAAVLITIALSLSSFSQAGYLLNIQEIA--PDCAGFLHGIANSAGTLAAIISTIGTGYFVQW--- 270 (302)
Q Consensus 202 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~--- 270 (302)
.+...++ .........+...+......+..+...|.. +++|++..+..+....+|+.+++.+.+.+...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~ 165 (437)
T TIGR00792 86 LLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGG 165 (437)
T ss_pred HHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4443332 112222223333334444455566666764 37899999998888888888777766655431
Q ss_pred ---ccchhHHHHHHHHHHHHHHHHHHhhcc
Q 022127 271 ---LGSFQAFLTVTAGLYFVTTIFWNLYST 297 (302)
Q Consensus 271 ---~g~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (302)
..+|+..+.+.+++.++..+......+
T Consensus 166 ~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~ 195 (437)
T TIGR00792 166 GDDKFGWFMFALVLALIGVVSLIICFFGTK 195 (437)
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHcCCE
Confidence 114888888877777666655444433
No 191
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.30 E-value=4.7e-11 Score=102.63 Aligned_cols=147 Identities=13% Similarity=0.093 Sum_probs=110.7
Q ss_pred hhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc--ccchHHHHHHHHH
Q 022127 141 VFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY--AKSPAVAAVLITI 218 (302)
Q Consensus 141 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 218 (302)
+++++..+.|.+.+...++..++.++.|++.||+|+|+.. ..+.++..+...+... ..+....++.-.+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l---------~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~ 140 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSI---------GIGMFLSSVISIVIPWAAGGGIALVVFCRVI 140 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhh---------HHHHHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 4789999999999999999999999999999999987532 2333333333333222 2233444445555
Q ss_pred HHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhc
Q 022127 219 ALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
.+.+.+...+.......+..| ++|+++.|+.+...++|..++|.+.+.+.+...+|+..|++.++..++..++++.+.
T Consensus 141 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~ 219 (465)
T TIGR00894 141 QGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFP 219 (465)
T ss_pred HHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHh
Confidence 566667777777888889888 899999999999999999999999999988742399999998887776665555443
No 192
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.29 E-value=2.7e-10 Score=94.42 Aligned_cols=162 Identities=15% Similarity=0.044 Sum_probs=107.8
Q ss_pred HHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhccc--
Q 022127 130 LLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK-- 207 (302)
Q Consensus 130 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 207 (302)
.....|.+.++ .|+|..+.+..... .+...+ .++.|.++||++.|+... ||.++..+.+..++....+.+.+
T Consensus 7 ~~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Gr---r~~~l~~~~~~~~~~~~~l~~~~~~ 80 (356)
T TIGR00901 7 VGNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGR---RRSWLVLTQVLLLSLLLILSFLVPS 80 (356)
T ss_pred HHhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCc---cHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 44567778887 89999999998644 444444 889999999984321110 23333344444444433333332
Q ss_pred -chHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccc-------hhHHH
Q 022127 208 -SPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGS-------FQAFL 278 (302)
Q Consensus 208 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~-------~~~~~ 278 (302)
+.+.......+.........+...+.+.|..| |+|+.+.|+.....++|..+++.+.+.+.+..|. |+..|
T Consensus 81 ~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f 160 (356)
T TIGR00901 81 TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIF 160 (356)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHH
Confidence 22223333333444455556677788888887 8899999999999999999999999998877652 89999
Q ss_pred HHHHHHHHHHHHHHHhhcc
Q 022127 279 TVTAGLYFVTTIFWNLYST 297 (302)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~ 297 (302)
.+.++..++..+..++..+
T Consensus 161 ~i~ai~~l~~~~~~~~~~~ 179 (356)
T TIGR00901 161 FWTALLILPGLLVTLFLAK 179 (356)
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 8888877776555443333
No 193
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.29 E-value=2.9e-10 Score=97.88 Aligned_cols=175 Identities=15% Similarity=0.065 Sum_probs=119.4
Q ss_pred hcCccHHHHHHHHHhhhHHHHHH----HhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhH
Q 022127 108 LSKLPSWTVIIANITNNWGYFVL----LSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTL 183 (302)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~ 183 (302)
+++++++..+....+.....+.. ...++...++ .|-+ ....++.....++..++.++.|+++|.+|||
T Consensus 37 ~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~d-iG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr------ 108 (599)
T PF06609_consen 37 YRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINAD-IGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRR------ 108 (599)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHh-cCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcch------
Confidence 45667665554444433332222 2334444444 7755 5667777888899999999999999999965
Q ss_pred HHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHH
Q 022127 184 VRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTI 262 (302)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~ 262 (302)
.+.+.+.++..++.+.....++....+....+.+.+.+... .....++|+.| |.|..+.++.....-....++|.
T Consensus 109 ---~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ 184 (599)
T PF06609_consen 109 ---YFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPL 184 (599)
T ss_pred ---HHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHH
Confidence 34457777888888888888888777777777766555443 34555788888 88988777666554445556777
Q ss_pred HhhhhhccccchhHHHHHHHHHHHHHHHHHHhh
Q 022127 263 GTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 263 i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
+...+..+. +||+.|++..+...++.+...++
T Consensus 185 ia~~~~~~~-~WRw~~~~~~i~~~i~~vl~~~f 216 (599)
T PF06609_consen 185 IAQLFAAHS-GWRWIFYIFIIWSGIALVLIFFF 216 (599)
T ss_pred HHHHhccCC-CcchHHHHHHHHHHHHHHHHHHH
Confidence 776665554 59999999888877776654433
No 194
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.27 E-value=8.1e-11 Score=97.22 Aligned_cols=183 Identities=10% Similarity=0.132 Sum_probs=144.5
Q ss_pred HHhhcCc-cHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhc----cchhhhhHHhhHHHHHHHhhhhhhhcccchh-hccC
Q 022127 105 RHLLSKL-PSWTVIIANITNNWGYFVLLSWMPIYFNTVFN----VNLKQAAWFSAVPWGTMAVSGYMAGKASDSL-IKAG 178 (302)
Q Consensus 105 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-~~~~ 178 (302)
+..+++| .++.+...-+..-+++|++...+..|+....+ +|++++.-+.+.+..-.-+..+++|+++||+ |+|
T Consensus 14 ~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~- 92 (498)
T COG3104 14 MKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR- 92 (498)
T ss_pred cccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh-
Confidence 3455654 57788888899999999999999999988888 9999988888887777778889999999996 543
Q ss_pred CchhHHHHHHHHHhhhhhHHHHHHhhccc--chHHHHHHHHHHHHHhhhhhhhhhhHHhhhccc---hhhhHHHHHHHHH
Q 022127 179 YSLTLVRKIMQSIGFIGPGVSLLCLNYAK--SPAVAAVLITIALSLSSFSQAGYLLNIQEIAPD---CAGFLHGIANSAG 253 (302)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~~~~~g~~~~~~ 253 (302)
+.+ ..+.++..++.+.+.... ......+.+.+...+.|..-+...+...|..|+ +|-.+.++..+..
T Consensus 93 -------~tI-~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~i 164 (498)
T COG3104 93 -------RTI-VLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGI 164 (498)
T ss_pred -------HHH-HHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEe
Confidence 222 366666677776666653 344444555555567778788888888887762 3677888889999
Q ss_pred HHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhcc
Q 022127 254 TLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYST 297 (302)
Q Consensus 254 ~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (302)
|+|+.++|.+.+++.+..| |+..|...++-..++.+.+++.++
T Consensus 165 NiGsl~~p~i~~~~~~~~g-~~~gF~~aavGm~~gl~~f~~~~r 207 (498)
T COG3104 165 NIGSLIAPIITGLLAINYG-WHVGFGLAAVGMIIGLVIFLLGRR 207 (498)
T ss_pred ehHHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHccc
Confidence 9999999999999999987 999999999999999988877664
No 195
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.26 E-value=6.7e-11 Score=104.48 Aligned_cols=155 Identities=12% Similarity=0.050 Sum_probs=110.1
Q ss_pred hhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhccc----
Q 022127 132 SWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK---- 207 (302)
Q Consensus 132 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 207 (302)
..++. ++++++++..+.|++.+...++..++.++.+++.||.+||+... ++.++.+++.++....+
T Consensus 54 ~~l~~-iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~---------~g~ll~~lg~ll~alphf~~~ 123 (633)
T TIGR00805 54 SSLTT-IERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIG---------IGCAIMGLGSFLLSLPHFLSG 123 (633)
T ss_pred hhchh-hhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEE---------ecHHHHHHHHHHHhChHHhcC
Confidence 33444 45559999999999999999999999999999999999886542 34444444443332211
Q ss_pred ---------------------------------------------c--hHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-
Q 022127 208 ---------------------------------------------S--PAVAAVLITIALSLSSFSQAGYLLNIQEIAP- 239 (302)
Q Consensus 208 ---------------------------------------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p- 239 (302)
+ ....++.-.+.+.+.+...+...+++.|..|
T Consensus 124 ~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~ 203 (633)
T TIGR00805 124 RYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKS 203 (633)
T ss_pred CccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCc
Confidence 0 1123334445555555556666788888887
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhhhhhccc---------------------cchhHHHHHHHHHHHHHHHHHHhhc
Q 022127 240 DCAGFLHGIANSAGTLAAIISTIGTGYFVQWL---------------------GSFQAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 240 ~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~---------------------g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
++|+...|+.+....+|..+|+.+++.+.+.. |.|+..|++.+++.++..+.++.+.
T Consensus 204 ~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p 281 (633)
T TIGR00805 204 KNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFP 281 (633)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 88999999999999999999999999987542 2366778888777776665555444
No 196
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.26 E-value=1.1e-10 Score=95.89 Aligned_cols=177 Identities=11% Similarity=0.071 Sum_probs=114.6
Q ss_pred hcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHH
Q 022127 108 LSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKI 187 (302)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~ 187 (302)
.||+++|......++.++.......+.|.+++++.|+|.++.|.+.+...+...+.+++.|.++||++.||. .
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~-------L 76 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKH-------L 76 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSH-------H
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHH-------H
Confidence 467889999999999999988899999999998899999999999999999999999999999999998853 2
Q ss_pred HHHHhhhhhHHH-HHHhhcc----cchHHHHHHHHHHHHHhhhhhhhhhhHHhhhc---cchhhhHHHHHHHHHHHHHHH
Q 022127 188 MQSIGFIGPGVS-LLCLNYA----KSPAVAAVLITIALSLSSFSQAGYLLNIQEIA---PDCAGFLHGIANSAGTLAAII 259 (302)
Q Consensus 188 ~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~g~~~~~~~~g~~i 259 (302)
+..+..+....+ .+...+. .+. .....+++...+....+......... .++.+.-+|=....+++|.++
T Consensus 77 l~~i~~l~~l~~pff~~v~~pll~~n~---~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr~~~feYG~~R~wGSig~ai 153 (412)
T PF01306_consen 77 LWFIAILLLLFGPFFIYVFGPLLQSNF---WLGAIIGGIYLGLVFNAGVPLSEAYAERVSRRNGFEYGRARMWGSIGFAI 153 (412)
T ss_dssp HHHHHHHHHTCHHHHHHTHHHHHHTT----HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHcccchHHHHHHHHHHHHhcCCcchHHHHhhHHHHH
Confidence 222222221111 1111111 122 22223333333443443333332222 244566678888999999999
Q ss_pred HHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhc
Q 022127 260 STIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 260 ~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
+..+.|.+.+. + ....|++.....++..++....+
T Consensus 154 ~s~~~G~L~~i-~-p~~~fwi~s~~~~il~lll~~~~ 188 (412)
T PF01306_consen 154 ASLLAGILFNI-N-PNIIFWIASAAAIILLLLLLLLK 188 (412)
T ss_dssp HHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHSS-
T ss_pred HHHHhheeeee-C-ccHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999875 2 46677766655555444444433
No 197
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.26 E-value=5.4e-10 Score=106.51 Aligned_cols=156 Identities=12% Similarity=0.004 Sum_probs=110.5
Q ss_pred HhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccch--hhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhH
Q 022127 106 HLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNL--KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTL 183 (302)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~ 183 (302)
+.++++.++.+.+..++...........+..++.+.++.+. ...++..+...++..++++++|+++||+|||+..
T Consensus 4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l--- 80 (1146)
T PRK08633 4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVI--- 80 (1146)
T ss_pred chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHH---
Confidence 45677788877777777666665555445545544455543 3457778888899999999999999999976321
Q ss_pred HHHHHHHHhhhhhHHH---HHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHH
Q 022127 184 VRKIMQSIGFIGPGVS---LLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAII 259 (302)
Q Consensus 184 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i 259 (302)
..+.++..+. ..+....++.+...+..++.+.+.+...+...+++.+..| ++|++++|+.....++|..+
T Consensus 81 ------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~l 154 (1146)
T PRK08633 81 ------RIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILA 154 (1146)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHH
Confidence 2222221111 1222223455555666666667777777888888999887 88999999999999999999
Q ss_pred HHHHhhhhhcc
Q 022127 260 STIGTGYFVQW 270 (302)
Q Consensus 260 ~~~i~g~l~~~ 270 (302)
++.+++++.+.
T Consensus 155 g~~l~~~l~~~ 165 (1146)
T PRK08633 155 GTALFSFLFES 165 (1146)
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 198
>PTZ00207 hypothetical protein; Provisional
Probab=99.25 E-value=1e-09 Score=94.95 Aligned_cols=158 Identities=11% Similarity=0.009 Sum_probs=104.1
Q ss_pred HHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc
Q 022127 126 GYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY 205 (302)
Q Consensus 126 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (302)
..+.+..+.|.. ++.+|+|..+.+.+.+... ......++.|++.||+|+|+. ..++.+...++.++...
T Consensus 42 ~~y~fsv~s~~L-~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~v---------llig~ll~~iG~ll~al 110 (591)
T PTZ00207 42 FMYAFNLISGAM-QARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPI---------FVLSMTVFCLGTLLFAL 110 (591)
T ss_pred HHHHHHHHHHHH-HHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHH---------HHHHHHHHHHHHHHHHH
Confidence 344556666654 5559999999998876633 334566678999999997532 23555555555555544
Q ss_pred c------cchHHHHHHHHHHHHHhhhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHH
Q 022127 206 A------KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLT 279 (302)
Q Consensus 206 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~ 279 (302)
. .+.+...+...+.+.+.+...+.......+.+|++||.+.|+......+|+++.+.+...+.+. +++..|+
T Consensus 111 a~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~--~~~~~fl 188 (591)
T PTZ00207 111 TFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFSD--NTSAYFF 188 (591)
T ss_pred HhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hHHHHHH
Confidence 3 3455555555555555555556666667778899999999999999999998655544444432 3667777
Q ss_pred HHHHHHHHHHHHHHhhc
Q 022127 280 VTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 280 ~~~~~~~~~~~~~~~~~ 296 (302)
+.++..++..++...+.
T Consensus 189 ~l~vl~~vv~ll~~~~v 205 (591)
T PTZ00207 189 FLMSFALVVGILAIVFM 205 (591)
T ss_pred HHHHHHHHHHHHHHhhe
Confidence 77766666555554443
No 199
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.25 E-value=3.3e-10 Score=97.83 Aligned_cols=144 Identities=13% Similarity=0.054 Sum_probs=101.9
Q ss_pred ccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcc---------cc---hH
Q 022127 143 NVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA---------KS---PA 210 (302)
Q Consensus 143 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~---~~ 210 (302)
+.+..+.++..+...++..++.++.|+++||+|||+.. ..+..+..++.+..... ++ ..
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~---------~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 121 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSL---------KIAAVLFFISALGSAWPEFGFTSIGPDNTGYVP 121 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH---------HHHHHHHHHHHHHHHhhccccccccccchhHHH
Confidence 78889999999999999999999999999999987432 23333333332222211 11 22
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhh--------ccccchhHHHHHH
Q 022127 211 VAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFV--------QWLGSFQAFLTVT 281 (302)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~--------~~~g~~~~~~~~~ 281 (302)
..++.-.+.+.+.+...+...+++.|..| ++|+++.++.+....+|..+++.+.+.+. +..| |+..|++.
T Consensus 122 ~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g-Wr~~f~~~ 200 (479)
T PRK10077 122 EFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDG-WRYMFASE 200 (479)
T ss_pred HHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCC-hHHHHHHH
Confidence 33445566667777777888888899888 88999999999999999998887765543 2334 99999887
Q ss_pred HHHHHHHHHHHHhhc
Q 022127 282 AGLYFVTTIFWNLYS 296 (302)
Q Consensus 282 ~~~~~~~~~~~~~~~ 296 (302)
++..++..+...+++
T Consensus 201 ~~~~~~~~~~~~~l~ 215 (479)
T PRK10077 201 AIPALLFLMLLYFVP 215 (479)
T ss_pred HHHHHHHHHHHHcCC
Confidence 777766655444433
No 200
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.24 E-value=3.4e-11 Score=96.24 Aligned_cols=147 Identities=16% Similarity=0.078 Sum_probs=126.4
Q ss_pred hccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHH
Q 022127 142 FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALS 221 (302)
Q Consensus 142 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (302)
.+.+..+.|++.....+...+.+++.|.+.||+|.|. .+.+++.......+++.+.++.+...+.-.+-+.
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~i---------pm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgv 171 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKI---------PMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGV 171 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhcccc---------HHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhh
Confidence 4456688999999999999999999999999999653 3357888888888888888888877777888888
Q ss_pred HhhhhhhhhhhHHhhhcc--chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhccC
Q 022127 222 LSSFSQAGYLLNIQEIAP--DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTG 298 (302)
Q Consensus 222 ~~~~~~~~~~~~~~~~~p--~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (302)
+..+......+++.+.+| ++|++++|+.-.+..+|-.+||.++|.++|..| +...|.+.+.++++-..+.++..++
T Consensus 172 gsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G-k~aPFlVL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 172 GSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG-KSAPFLVLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred hHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC-CcCcHHHHHHHHHHHHHHHHheeCc
Confidence 888888888999999988 357999999999999999999999999999987 9999999999998888776665543
No 201
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.23 E-value=2.4e-09 Score=91.16 Aligned_cols=161 Identities=14% Similarity=0.084 Sum_probs=101.7
Q ss_pred HHHHhhhHHHHHHHhhhhHHHHHhhc---cchhh---hhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHH
Q 022127 118 IANITNNWGYFVLLSWMPIYFNTVFN---VNLKQ---AAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSI 191 (302)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~g---~s~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 191 (302)
+..++...-...+....| ++.++++ .+..+ .+...+...++..+++++.|+++||+|||+. +..
T Consensus 29 ~~~~~~~~d~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~---------l~~ 98 (432)
T PRK10406 29 SGNLVEWFDFYVYSFCSL-YFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKS---------MLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH---------HHH
Confidence 334444444444444444 4444453 44443 3334455566667999999999999998632 235
Q ss_pred hhhhhHHHHHHhhcccch--------HHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHH
Q 022127 192 GFIGPGVSLLCLNYAKSP--------AVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTI 262 (302)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~ 262 (302)
+.....++.......++. ......-.+.+.+.+...+...+++.|..| ++|+...++.......|..+++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 555555555555444432 234444555666666677888888899887 88999999888777777777776
Q ss_pred Hhhhhh--------ccccchhHHHHHHHHHHHHHH
Q 022127 263 GTGYFV--------QWLGSFQAFLTVTAGLYFVTT 289 (302)
Q Consensus 263 i~g~l~--------~~~g~~~~~~~~~~~~~~~~~ 289 (302)
+...+. +..| |+..|.+.++..++..
T Consensus 179 ~~~~~~~~~~~~~~~~~g-Wr~~F~i~~~~~ll~~ 212 (432)
T PRK10406 179 VVVVLQQTLEDAELREWG-WRIPFALGAVLAVVAL 212 (432)
T ss_pred HHHHHHHhCCHHHHhccc-hHHHHHHHHHHHHHHH
Confidence 655443 1344 9999998777665543
No 202
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.21 E-value=2e-10 Score=97.14 Aligned_cols=282 Identities=13% Similarity=0.103 Sum_probs=158.2
Q ss_pred hhhhcccC--ccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCChH
Q 022127 6 TLTSRWFP--SHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKS 83 (302)
Q Consensus 6 ~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 83 (302)
+++.|... +++||...+.......+|.+++..++|.+.+..++|..|.+.+.+..+..+...+..+|+++..+. +
T Consensus 109 a~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~~~~-~-- 185 (433)
T PF03092_consen 109 ALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEERKVRPAD-E-- 185 (433)
T ss_pred HHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhccccccc-h--
Confidence 34445442 334888899999999999999999999999999999999998888887766666655552211111 0
Q ss_pred HHHHHHhcCccc---ccCCCCcchHHhhcCccHHHHHH-HHHhhhHHHHHHHhhhhHHHHHhhc---cchhhhhHHhhHH
Q 022127 84 ELRLIQAGKSDS---VKKRNPPSLRHLLSKLPSWTVII-ANITNNWGYFVLLSWMPIYFNTVFN---VNLKQAAWFSAVP 156 (302)
Q Consensus 84 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g---~s~~~~~~~~~~~ 156 (302)
.....++..+. ..++.....++.+++|.+|...+ ..++............-.+..+..+ +|+...+......
T Consensus 186 -~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg 264 (433)
T PF03092_consen 186 -VFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVG 264 (433)
T ss_pred -hhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHH
Confidence 00000000000 00111224566777788776655 2222221111110100001123344 7777777776555
Q ss_pred HHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc---------ccchHHHHHHHHHHHHHhhhhh
Q 022127 157 WGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY---------AKSPAVAAVLITIALSLSSFSQ 227 (302)
Q Consensus 157 ~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 227 (302)
.++.++|..+... +.++.. .|+.+.....+.....+.-... .++.+....--.+......+.+
T Consensus 265 ~~~~l~g~~~y~~----~~~~~~----~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~ 336 (433)
T PF03092_consen 265 SIASLLGILLYRK----YFSNWS----WRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAF 336 (433)
T ss_pred HHHHHHHHHHHHH----HHhCCC----HHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHH
Confidence 5666666555443 333222 1444433333222222211111 1111222333344455556666
Q ss_pred hhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc-------chhHHHHHHHHHHHHHHHHHHhhccCc
Q 022127 228 AGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG-------SFQAFLTVTAGLYFVTTIFWNLYSTGE 299 (302)
Q Consensus 228 ~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (302)
-+......++.| ...|+.+++..++.|+|..++..+...+.+..+ +.....++..++.++...+..++.+++
T Consensus 337 mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~lLp~~~ 416 (433)
T PF03092_consen 337 MPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFLLPPQK 416 (433)
T ss_pred HHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 677777888888 789999999999999999999999988876544 233445555555555555554555543
No 203
>PRK09952 shikimate transporter; Provisional
Probab=99.20 E-value=3.4e-09 Score=90.36 Aligned_cols=163 Identities=14% Similarity=0.100 Sum_probs=106.1
Q ss_pred HHHHHHHHhhhHHHHHHHhhhhHHHHHhh--ccchhhhhHHh-----hHHHHHHHhhhhhhhcccchhhccCCchhHHHH
Q 022127 114 WTVIIANITNNWGYFVLLSWMPIYFNTVF--NVNLKQAAWFS-----AVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRK 186 (302)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~s~~~~~~~~-----~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~ 186 (302)
....+..++...-........|.+..+.+ +.++.+ +... ....++..+++++.|+++||+|||+.
T Consensus 25 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~------- 96 (438)
T PRK09952 25 LGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRM------- 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHH-------
Confidence 34444444444444444445555555544 566553 4432 23445567888999999999997632
Q ss_pred HHHHHhhhhhHHHHHHhhcccchH--------HHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHH
Q 022127 187 IMQSIGFIGPGVSLLCLNYAKSPA--------VAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAA 257 (302)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~ 257 (302)
+..+..+..++..+..+.++.. .....-.+.+.+.+..++....+..|..| ++|+...+..+....+|.
T Consensus 97 --l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~ 174 (438)
T PRK09952 97 --LMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGL 174 (438)
T ss_pred --HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 2356666666666666666643 23444455566666666777788889888 889999999888888888
Q ss_pred HHHHHHhhhhhc--------cccchhHHHHHHHHHHHH
Q 022127 258 IISTIGTGYFVQ--------WLGSFQAFLTVTAGLYFV 287 (302)
Q Consensus 258 ~i~~~i~g~l~~--------~~g~~~~~~~~~~~~~~~ 287 (302)
.+++.+...+.. ..| |+..|++.++..++
T Consensus 175 ~l~~~~~~~l~~~~~~~~~~~~g-Wr~~f~~~~~~~l~ 211 (438)
T PRK09952 175 LLSTGLVSLISMMTTDEQFLSWG-WRIPFLFSIVLVLI 211 (438)
T ss_pred HHHHHHHHHHHHhCCHHHhhccC-hHHHHHHHHHHHHH
Confidence 888877766542 344 99999887766544
No 204
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.20 E-value=3e-09 Score=92.30 Aligned_cols=139 Identities=9% Similarity=-0.079 Sum_probs=99.2
Q ss_pred cchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccc------hHHHHHHHH
Q 022127 144 VNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKS------PAVAAVLIT 217 (302)
Q Consensus 144 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 217 (302)
.+..+.+.+.+...++..++.++.|+++||+|||+.. ..+.++..++.......++ .........
T Consensus 53 ~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~---------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~ 123 (502)
T TIGR00887 53 LPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVY---------GMELIIMIIATVASGLSPGSSPKSVMATLCFWRF 123 (502)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH---------HHHHHHHHHHHHHHHHccCcccchHHHHHHHHHH
Confidence 4455678889999999999999999999999986322 2333333333333333322 344556666
Q ss_pred HHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhcc----------------------ccch
Q 022127 218 IALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQW----------------------LGSF 274 (302)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~----------------------~g~~ 274 (302)
+.+++.+...+....+..|..| ++|+++.++.+....+|..+++.+...+... ..+|
T Consensus 124 l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W 203 (502)
T TIGR00887 124 WLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMW 203 (502)
T ss_pred HHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccH
Confidence 6677777777888899999998 8999999999999999999999887665321 0149
Q ss_pred hHHHHHHHHHHHHHHHH
Q 022127 275 QAFLTVTAGLYFVTTIF 291 (302)
Q Consensus 275 ~~~~~~~~~~~~~~~~~ 291 (302)
+..+.+.++..++..+.
T Consensus 204 R~~~~~~~ip~~i~~~~ 220 (502)
T TIGR00887 204 RILIGFGAVPALLALYF 220 (502)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 98887776666555444
No 205
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.19 E-value=2.4e-09 Score=92.64 Aligned_cols=165 Identities=13% Similarity=0.066 Sum_probs=106.8
Q ss_pred HHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhh----hhH--HhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHH
Q 022127 114 WTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQ----AAW--FSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKI 187 (302)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~----~~~--~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~ 187 (302)
....+..++...-...+....| ++.+.++.+..+ .+. ..+...++..++.++.|+++||+|||+.
T Consensus 19 ~~~~~g~~~~~~d~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~-------- 89 (490)
T PRK10642 19 TAASLGNAMEWFDFGVYGFVAY-ALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKI-------- 89 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH--------
Confidence 3344455554444444444444 444445433211 111 1356668889999999999999997632
Q ss_pred HHHHhhhhhHHHHHHhhcccchHH--------HHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHH
Q 022127 188 MQSIGFIGPGVSLLCLNYAKSPAV--------AAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAI 258 (302)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~ 258 (302)
+..+.++.+++.+.....++... ....-.+.+.+.+...+....++.|..| ++||...++......+|..
T Consensus 90 -l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~ 168 (490)
T PRK10642 90 -LAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFV 168 (490)
T ss_pred -HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 23566666666666666666432 3444556666677777788888999887 8899999998888778887
Q ss_pred HHHHHhhhhh--------ccccchhHHHHHHHHHHHHHH
Q 022127 259 ISTIGTGYFV--------QWLGSFQAFLTVTAGLYFVTT 289 (302)
Q Consensus 259 i~~~i~g~l~--------~~~g~~~~~~~~~~~~~~~~~ 289 (302)
+++.+...+. +..| |+..|++.+...+++.
T Consensus 169 lg~~~~~~~~~~~~~~~~~~~g-WR~~f~i~~~~~l~~~ 206 (490)
T PRK10642 169 LGAGVVVLISTIVGEANFLDWG-WRIPFFIALPLGIIGL 206 (490)
T ss_pred HHHHHHHHHHHhcCHHHhcCcc-HHHHHHHHHHHHHHHH
Confidence 7776654432 2445 9999998766555443
No 206
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.18 E-value=6.6e-09 Score=87.30 Aligned_cols=175 Identities=11% Similarity=-0.009 Sum_probs=111.8
Q ss_pred HHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHH--hhHHHHHHHhhhhhh-hcccchhhccCCchhHHHHHHH
Q 022127 113 SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF--SAVPWGTMAVSGYMA-GKASDSLIKAGYSLTLVRKIMQ 189 (302)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~--~~~~~~~~~~~~~~~-g~l~dr~~~~~~~~~~~~~~~~ 189 (302)
+..+...++.+..........+|.++++ .|.|..+.|.+ .........+..++. ++..||.|+|+ .++.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~-~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~-------~~i~ 74 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRE-DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRR-------SWVL 74 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcch-------hHHH
Confidence 3456667777888888888999999999 69999999997 356677787777777 45789888873 3222
Q ss_pred HHhhhhh--HHHHHHhhcccc-hHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhh
Q 022127 190 SIGFIGP--GVSLLCLNYAKS-PAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTG 265 (302)
Q Consensus 190 ~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g 265 (302)
....... ...+.......+ ............++.....+.......|..+ ++++...+.......+|..+++...+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~ 154 (390)
T TIGR02718 75 PMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTL 154 (390)
T ss_pred HHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 2212111 111111111212 1122222222223333334444555555555 55677777777777888899998888
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHHhhc
Q 022127 266 YFVQWLGSFQAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 266 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
++.++.| |+..|++.+++.++..+..+...
T Consensus 155 ~l~~~~g-w~~~f~~~a~l~~~~~~~~~~~~ 184 (390)
T TIGR02718 155 VLFGKFG-QRPAFLLVACVPLASLVCVLWLK 184 (390)
T ss_pred HHHHHhC-HHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999887 99999999888777666554443
No 207
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.18 E-value=2.9e-09 Score=88.19 Aligned_cols=287 Identities=14% Similarity=0.076 Sum_probs=158.5
Q ss_pred chhhhhhhcccCcc--chhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCC----CC
Q 022127 2 PAMSTLTSRWFPSH--ERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTND----PC 75 (302)
Q Consensus 2 p~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~----p~ 75 (302)
|...++++|.+|++ +|-..++++.++.++|..++|.+.+++.++.||+..|...++-..+ .++.+...++. +.
T Consensus 136 ~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~-gl~~f~~~~r~~~~~~~ 214 (498)
T COG3104 136 PNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMII-GLVIFLLGRRHVKGIGG 214 (498)
T ss_pred ccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHH-HHHHHHHccchhcCCCC
Confidence 45678899999874 4788899999999999999999999999999999999996664444 33333333321 11
Q ss_pred CCCCC--ChHHHHH---------HHh----cCcccc------------cC---CCCcchHHhhcC-ccHHHHHHHHHhhh
Q 022127 76 NSPFV--SKSELRL---------IQA----GKSDSV------------KK---RNPPSLRHLLSK-LPSWTVIIANITNN 124 (302)
Q Consensus 76 ~~~~~--~~~~~~~---------~~~----~~~~~~------------~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~ 124 (302)
..+.. +..+... ... ....++ .. .+.....+...+ ++.+..+. .+...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~-Lfl~~ 293 (498)
T COG3104 215 VPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIP-LFLFA 293 (498)
T ss_pred CCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHH-HHHHH
Confidence 11110 0000000 000 000000 00 000000000011 22222222 22222
Q ss_pred HHHHH----HHhhhhHHHHHh-----hccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhh
Q 022127 125 WGYFV----LLSWMPIYFNTV-----FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIG 195 (302)
Q Consensus 125 ~~~~~----~~~~~~~~~~~~-----~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 195 (302)
..++. ..+.+..|.++. +|++ ...++..+...+.-++.+++..++..|.++++.......|.- +++.+
T Consensus 294 ~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~-vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFa--lGl~l 370 (498)
T COG3104 294 VIFWALYEQMGSSLNLYADRNVNRQIFGFE-VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFA--LGLIL 370 (498)
T ss_pred HHHHHHHHhccchHHHHHHHhhccccccee-cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHH--HHHHH
Confidence 22222 223344444432 2222 345677788888888888888888888655542222223433 44444
Q ss_pred hHHHHHHhhcc----------cchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHh
Q 022127 196 PGVSLLCLNYA----------KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGT 264 (302)
Q Consensus 196 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~ 264 (302)
++.+.+.+... .+.++.+....+..++--+..+...+.+.+..| ...+..+|........+..++..+.
T Consensus 371 ~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va 450 (498)
T COG3104 371 AGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVA 450 (498)
T ss_pred HHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceec
Confidence 44444333221 134455555566666666677777888888888 6688888888877777777777777
Q ss_pred hh------hhccccchhHHHHHHHHHHHHHHHHHHh
Q 022127 265 GY------FVQWLGSFQAFLTVTAGLYFVTTIFWNL 294 (302)
Q Consensus 265 g~------l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 294 (302)
+. ..+.. .....|..++...++..+..+.
T Consensus 451 ~~~~~~~~~~~~~-~~~~~F~~~g~v~i~~~~~~~~ 485 (498)
T COG3104 451 GLTAVTDPAYTAF-IEGRVFGTIGVVAIVIGILLLL 485 (498)
T ss_pred ccccccchhhhhh-hhhhhHHHHHHHHHHHHHHHHH
Confidence 63 12222 2455677666666655554443
No 208
>PRK15075 citrate-proton symporter; Provisional
Probab=99.17 E-value=3e-09 Score=90.63 Aligned_cols=160 Identities=11% Similarity=0.070 Sum_probs=105.9
Q ss_pred HHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHH-hhHH-----HHHHHhhhhhhhcccchhhccCCchhHHHH
Q 022127 113 SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF-SAVP-----WGTMAVSGYMAGKASDSLIKAGYSLTLVRK 186 (302)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~-~~~~-----~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~ 186 (302)
.....+..++.+.-...+....|...++ ++.++.+.+.. .+.. .+...++.++.|++.||+|||+.
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~------- 88 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAKT-FFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKG------- 88 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHH-------
Confidence 3456667777777777777888876666 78776654433 2221 22234678899999999997632
Q ss_pred HHHHHhhhhhHHHHHHhhcccchHH--------HHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHH
Q 022127 187 IMQSIGFIGPGVSLLCLNYAKSPAV--------AAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAA 257 (302)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~ 257 (302)
...+.....++.......++... ..+.-.+.+.+.+...+....+..|..| ++|++..++.+...+++.
T Consensus 89 --l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~ 166 (434)
T PRK15075 89 --LIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAV 166 (434)
T ss_pred --HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHH
Confidence 23455555555656666655432 2333344444455556666778889888 899999999999888888
Q ss_pred HHHHHHhhhhh--------ccccchhHHHHHHHH
Q 022127 258 IISTIGTGYFV--------QWLGSFQAFLTVTAG 283 (302)
Q Consensus 258 ~i~~~i~g~l~--------~~~g~~~~~~~~~~~ 283 (302)
.+++.+++.+. +..| |+..|++...
T Consensus 167 ~~g~~~g~~l~~~~~~~~~~~~g-Wr~~f~~~~~ 199 (434)
T PRK15075 167 VFAALLGYLLNQWLSPAQMAEWG-WRIPFLIGCL 199 (434)
T ss_pred HHHHHHHHHHHHhCCHHHHhccc-hHHHHHHHHH
Confidence 88887777653 3455 9999887543
No 209
>PRK09669 putative symporter YagG; Provisional
Probab=99.17 E-value=2.1e-09 Score=91.86 Aligned_cols=175 Identities=14% Similarity=0.039 Sum_probs=108.5
Q ss_pred HHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhh
Q 022127 117 IIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGP 196 (302)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 196 (302)
.+..+..+........+++.|+.+.+|+|+.+.|.+....-+...+..++.|+++||.+.|.-. ||..+..+.+..
T Consensus 15 g~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Gr----rrp~il~~~~~~ 90 (444)
T PRK09669 15 GLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQ----FRPYLLWFAIPF 90 (444)
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCC----cchhHHHHHHHH
Confidence 3333444445566678899999999999999999999999999999999999999996543211 233333444444
Q ss_pred HHHHHHhhcccc------hHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc--chhhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 022127 197 GVSLLCLNYAKS------PAVAAVLITIALSLSSFSQAGYLLNIQEIAP--DCAGFLHGIANSAGTLAAIISTIGTGYFV 268 (302)
Q Consensus 197 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~g~~~~~~~~g~~i~~~i~g~l~ 268 (302)
++...+....++ .....+...+..........+..+...|..+ ++|.+..+......++|+.+++.+...+.
T Consensus 91 ~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~ 170 (444)
T PRK09669 91 GVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLV 170 (444)
T ss_pred HHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444333322221 1222222223333344455566677777664 77898888888888888888776554444
Q ss_pred cccc------chhHHHHHHHHHHHHHHHHHHhh
Q 022127 269 QWLG------SFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 269 ~~~g------~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
...+ +|+..+.+.+++.++..+..++.
T Consensus 171 ~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~ 203 (444)
T PRK09669 171 DILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFM 203 (444)
T ss_pred HHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCC
Confidence 3221 25556666665555554444333
No 210
>TIGR00898 2A0119 cation transport protein.
Probab=99.16 E-value=3.7e-10 Score=98.13 Aligned_cols=149 Identities=7% Similarity=0.006 Sum_probs=114.5
Q ss_pred hhhHHHHHhhccc---hhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccch
Q 022127 133 WMPIYFNTVFNVN---LKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSP 209 (302)
Q Consensus 133 ~~~~~~~~~~g~s---~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (302)
..|...+| ++++ ..+.++..+...++..++.++.|+++||+|||+. ...+.++..++.+...+.++.
T Consensus 111 ~~~~i~~e-~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~---------~~~~~~~~~i~~~~~~~~~~~ 180 (505)
T TIGR00898 111 FSSTIVTE-WDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKV---------LLLSTLVTAVSGVLTAFSPNY 180 (505)
T ss_pred ccccEEEE-ecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHH---------HHHHHHHHHHHHHHHHHcccH
Confidence 44544444 8888 8889999999999999999999999999997632 234555555566666667777
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHH
Q 022127 210 AVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVT 288 (302)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~ 288 (302)
+...+...+.+++.+...+.......|..| ++|+.+.++......+|..++|.+.+.+.+ |+..+++.++..++.
T Consensus 181 ~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~----wr~~~~~~~i~~~~~ 256 (505)
T TIGR00898 181 TVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD----WRWLQLAVSLPTFLF 256 (505)
T ss_pred HHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH----HHHHHHHHHHHHHHH
Confidence 777777777777777777888888899888 789999999988888999998888766542 888888888777766
Q ss_pred HHHHHhh
Q 022127 289 TIFWNLY 295 (302)
Q Consensus 289 ~~~~~~~ 295 (302)
.+..+++
T Consensus 257 ~~~~~~~ 263 (505)
T TIGR00898 257 FLLSWFV 263 (505)
T ss_pred HHHHHhc
Confidence 6555433
No 211
>PRK11462 putative transporter; Provisional
Probab=99.13 E-value=6.5e-09 Score=89.01 Aligned_cols=174 Identities=15% Similarity=0.082 Sum_probs=114.6
Q ss_pred HHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhh
Q 022127 117 IIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGP 196 (302)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 196 (302)
.+.-+..+........|+..|+.+..|.++..+|.+..+.-+.-++.-++.|.++||...|.-. ||..+..+.+..
T Consensus 15 g~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr----~rp~il~g~i~~ 90 (460)
T PRK11462 15 GMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGK----FRPWVLFGALPF 90 (460)
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCC----cchhHhHHHHHH
Confidence 3444444556666678899999999999999999999999999999999999999986544222 333334554444
Q ss_pred HHHHHHhhcccc------hHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc--chhhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 022127 197 GVSLLCLNYAKS------PAVAAVLITIALSLSSFSQAGYLLNIQEIAP--DCAGFLHGIANSAGTLAAIISTIGTGYFV 268 (302)
Q Consensus 197 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~g~~~~~~~~g~~i~~~i~g~l~ 268 (302)
++...++...++ .....+...+...+......+..++..|+.+ ++|++..+......++|..+++.+...+.
T Consensus 91 ~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv 170 (460)
T PRK11462 91 GIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLV 170 (460)
T ss_pred HHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 544444433321 1223333344445555666677788888765 78999999999999998888877765554
Q ss_pred cccc------chhHHHHHHHHHHHHHHHHHHh
Q 022127 269 QWLG------SFQAFLTVTAGLYFVTTIFWNL 294 (302)
Q Consensus 269 ~~~g------~~~~~~~~~~~~~~~~~~~~~~ 294 (302)
+..| +|.....+.+++.+++..+.+.
T Consensus 171 ~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~ 202 (460)
T PRK11462 171 NLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFF 202 (460)
T ss_pred HHhCCCchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 4332 2455555555554444444333
No 212
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.10 E-value=1.3e-09 Score=92.25 Aligned_cols=149 Identities=13% Similarity=0.087 Sum_probs=121.9
Q ss_pred hhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhccc--chHHHHHHHHH
Q 022127 141 VFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK--SPAVAAVLITI 218 (302)
Q Consensus 141 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 218 (302)
.+++|+.+-+++.+....+.+++.+..|++.||+|.|+. + ..+.++.++..++.+... +.+..++.-.+
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v--------~-~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~l 137 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRV--------F-FISGLISALLTLLTPLAASIGFYLLLVLRFL 137 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHH--------H-HHHHHHHHHHHHHHHHHHHhcchhhHHHHHH
Confidence 578899999999999999999999999999999997632 2 355555566666655543 33445566667
Q ss_pred HHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhcc-ccchhHHHHHHHHHHHHHHHHHHhhc
Q 022127 219 ALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQW-LGSFQAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
.+...+..++.......+..| ++|++..++.....++|..++-++.|.+.+. .| |+..|++.+++.++-.++++++.
T Consensus 138 qGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~G-W~sifY~~g~~g~i~~~~w~~~~ 216 (466)
T KOG2532|consen 138 QGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLG-WPSIFYVFGIVGLIWFILWFLFY 216 (466)
T ss_pred hHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCC-CchHHHHHHHHHHHHHHHHHHHh
Confidence 777778888888888888888 9999999999999999999999999999998 65 99999999999998888887766
Q ss_pred cCc
Q 022127 297 TGE 299 (302)
Q Consensus 297 ~~~ 299 (302)
+++
T Consensus 217 ~d~ 219 (466)
T KOG2532|consen 217 SDS 219 (466)
T ss_pred cCC
Confidence 543
No 213
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.10 E-value=1e-09 Score=87.54 Aligned_cols=125 Identities=16% Similarity=0.099 Sum_probs=95.0
Q ss_pred cchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHh
Q 022127 144 VNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLS 223 (302)
Q Consensus 144 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (302)
.+...+|++-+.+++...+.++.+|.++||+||| ..+.++.+..++.........+....+..-.+++.+.
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRk---------pvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~k 135 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRK---------PVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFK 135 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCch---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 3556788899999999999999999999999965 3334666666666666666666622222244444433
Q ss_pred hhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhc---cccchhHHH
Q 022127 224 SFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ---WLGSFQAFL 278 (302)
Q Consensus 224 ~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~---~~g~~~~~~ 278 (302)
+ ..+...++++|+.+ |+|+.+++.++....+|-.+||.++|++.+ ..|++..++
T Consensus 136 g-nl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~al 193 (451)
T KOG2615|consen 136 G-NLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFAL 193 (451)
T ss_pred C-chHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHH
Confidence 3 45677888999887 899999999999999999999999999987 456555444
No 214
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.08 E-value=7.5e-09 Score=87.60 Aligned_cols=163 Identities=12% Similarity=0.042 Sum_probs=101.8
Q ss_pred HHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhh
Q 022127 115 TVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFI 194 (302)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 194 (302)
.+.+..++.+.........++.+++++.|+|..+.|++.+...++..++++..|.++||+|+| |+.+ .++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~-------r~~~-~~~~~ 77 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSA-------QKVY-AVCHF 77 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-------HHHH-HHHHH
Confidence 456777777778778889999999988999999999999999999999999999999999764 2222 24444
Q ss_pred hhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHH----h----hhcc-chhhhHHHHHHHHHHHHHHHHHHHhh
Q 022127 195 GPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNI----Q----EIAP-DCAGFLHGIANSAGTLAAIISTIGTG 265 (302)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g 265 (302)
+..+........++.+.......+.+.......+...+.. . |... ..+.+..| .+|.+++|.+.|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g 151 (418)
T TIGR00889 78 AGALLLFFAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVS 151 (418)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHH
Confidence 4444444445555555444444443333332223222221 1 2121 12333333 468889999998
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHH
Q 022127 266 YFVQWLGSFQAFLTVTAGLYFVTTIFWN 293 (302)
Q Consensus 266 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 293 (302)
.+ +..+ .+..|++.++..++..++.+
T Consensus 152 ~l-~~~~-~~~~f~~~~~~~~~~~~~~~ 177 (418)
T TIGR00889 152 LL-DIEL-SNIQLYITAGSSALLGVFAL 177 (418)
T ss_pred Hh-cccc-hhHHHHHHHHHHHHHHHHHh
Confidence 87 3222 23346666655555554433
No 215
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.07 E-value=1.2e-08 Score=87.92 Aligned_cols=171 Identities=16% Similarity=0.111 Sum_probs=108.8
Q ss_pred HHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchh----hccCCchhHHHHHHHHH
Q 022127 116 VIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSL----IKAGYSLTLVRKIMQSI 191 (302)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----~~~~~~~~~~~~~~~~~ 191 (302)
..+..+..+........+++.|+++..|.++...|.+....-+..++..++.|.++||. |||+ ..+..
T Consensus 11 yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrr--------p~il~ 82 (473)
T PRK10429 11 YGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFK--------PWILI 82 (473)
T ss_pred hccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcc--------hhHhh
Confidence 34444555666677778899999999999999999999999999999999999999965 6542 22335
Q ss_pred hhhhhHHHHHHhhcccc------hHHHHHHHHHHHHHhhhhhhhhhhHHhhhc--cchhhhHHHHHHHHHHHHHHHHHHH
Q 022127 192 GFIGPGVSLLCLNYAKS------PAVAAVLITIALSLSSFSQAGYLLNIQEIA--PDCAGFLHGIANSAGTLAAIISTIG 263 (302)
Q Consensus 192 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~g~~~~~~~~g~~i~~~i 263 (302)
+....++...++...++ .....+...+...+......+..+...|+. +++|.+..+......++|+.+.+.+
T Consensus 83 g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~ 162 (473)
T PRK10429 83 GTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGF 162 (473)
T ss_pred hhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555444433221 112222223333445555666777888876 3789998888777778777666655
Q ss_pred hhhhhcccc------chhHHHHHHHHHHHHHHHHHHh
Q 022127 264 TGYFVQWLG------SFQAFLTVTAGLYFVTTIFWNL 294 (302)
Q Consensus 264 ~g~l~~~~g------~~~~~~~~~~~~~~~~~~~~~~ 294 (302)
...+.+..| .|.....+.+++.++..+..+.
T Consensus 163 ~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~ 199 (473)
T PRK10429 163 TLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLR 199 (473)
T ss_pred HHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHc
Confidence 444322211 1444444555554444444433
No 216
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.07 E-value=4.8e-09 Score=89.19 Aligned_cols=170 Identities=18% Similarity=0.149 Sum_probs=120.2
Q ss_pred HhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccc----hhhccCCchhHHHHHHHHHhhhhh
Q 022127 121 ITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASD----SLIKAGYSLTLVRKIMQSIGFIGP 196 (302)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~~~~~~~~~~~~~~~~~~~~~~~ 196 (302)
+...........+++.|+.+..|.++...|.+.....+..++..++.|.++| |+|||+.. +..+....
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~--------~l~g~i~~ 82 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPW--------ILIGAILL 82 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceE--------eehhhHHH
Confidence 4444555556678888999989999999999999999999999999999999 67766433 23566666
Q ss_pred HHHHHHhhcc-c---c----hHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc--chhhhHHHHHHHHHHHHHHHHHHHhhh
Q 022127 197 GVSLLCLNYA-K---S----PAVAAVLITIALSLSSFSQAGYLLNIQEIAP--DCAGFLHGIANSAGTLAAIISTIGTGY 266 (302)
Q Consensus 197 ~~~~~~~~~~-~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~g~~~~~~~~g~~i~~~i~g~ 266 (302)
+++..++... + + .....+...+..........+..++..|..+ ++|.+..+.......+|..+...+.+.
T Consensus 83 ~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~ 162 (428)
T PF13347_consen 83 ALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPI 162 (428)
T ss_pred HHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhh
Confidence 6666555543 2 1 1112333333344555556666777888776 679999999988888888777777777
Q ss_pred hhcccc------chhHHHHHHHHHHHHHHHHHHhhccC
Q 022127 267 FVQWLG------SFQAFLTVTAGLYFVTTIFWNLYSTG 298 (302)
Q Consensus 267 l~~~~g------~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (302)
+.+..| +|+....+.+++.++..++.....||
T Consensus 163 l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 163 LVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred hhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 765443 47777777777777776666666555
No 217
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.04 E-value=4.5e-08 Score=79.07 Aligned_cols=158 Identities=18% Similarity=0.110 Sum_probs=118.1
Q ss_pred HHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcc---
Q 022127 130 LLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA--- 206 (302)
Q Consensus 130 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 206 (302)
.+-.+-+.+++.++.+..+++.+......+..+.++..+++.+|+|.|+ -+..++.+.+++..++...
T Consensus 31 l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~---------gi~lgL~l~avg~~lF~pAa~~ 101 (422)
T COG0738 31 LNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKA---------GIVLGLLLYAVGAALFWPAASS 101 (422)
T ss_pred cchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHH---------HHHHHHHHHHHHHHHHhhhhhh
Confidence 3444445667779999999999999999999999999999999999652 2247777777777666432
Q ss_pred cchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhcc---------------
Q 022127 207 KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQW--------------- 270 (302)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~--------------- 270 (302)
.+....+....+.+.+.+......+.++..+.| +..+.-+.+...+..+|.+++|.+++.+..+
T Consensus 102 ~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~ 181 (422)
T COG0738 102 KSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIK 181 (422)
T ss_pred hhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHH
Confidence 334444554555555666667777888888777 6777888999999999999999999998873
Q ss_pred ---ccchhHHHHHHHHHHHHHHHHHHhhc
Q 022127 271 ---LGSFQAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 271 ---~g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
.++++.++...+...++..+.....+
T Consensus 182 ~~~~~~v~~pYl~~~~~lvll~v~~~~~k 210 (422)
T COG0738 182 GADASSVQFPYLILAGLLVLLAVLILLSK 210 (422)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 23466777777777776666655554
No 218
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.00 E-value=1.9e-08 Score=86.20 Aligned_cols=177 Identities=14% Similarity=0.046 Sum_probs=115.7
Q ss_pred HHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHh
Q 022127 113 SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIG 192 (302)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 192 (302)
.......++..... .......+.++++.+|.|+.+.+.+.+...+...+-.+ +|.++||++..... ||..+.++
T Consensus 28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~r----Rr~~l~~~ 101 (468)
T TIGR00788 28 LAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYT----KRWYLVLS 101 (468)
T ss_pred HHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCcc----chHHHHHH
Confidence 34555567777777 66667788888887999999999998888888888554 99999999622111 34443444
Q ss_pred hhhh-HHHHHHhhcccch-HHHHHHHHHHHHHhhhhhhhhhhHHhhhccchhh---hHHHHHHHHHHHHHHHHHHHhhhh
Q 022127 193 FIGP-GVSLLCLNYAKSP-AVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAG---FLHGIANSAGTLAAIISTIGTGYF 267 (302)
Q Consensus 193 ~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~g~~~~~~~~g~~i~~~i~g~l 267 (302)
.++. ......+...++. ........+..++.............|..+++++ ...+......++|..+++.+.|.+
T Consensus 102 ~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l 181 (468)
T TIGR00788 102 GLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPL 181 (468)
T ss_pred HHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHH
Confidence 4444 2333333333332 2223344455555556666667777776653333 344445555668999999999999
Q ss_pred hccccchhHHHHHHHHHHHHHHHHHHhhc
Q 022127 268 VQWLGSFQAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 268 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
.+..+ |+..|++.++..++......+++
T Consensus 182 ~~~~~-~~~~f~~~a~l~ll~~~~~~~~~ 209 (468)
T TIGR00788 182 LDKTL-TRILFLITAALLLLQLFVSNLSK 209 (468)
T ss_pred HHhcC-cchHHHHHHHHHHHHHHHHHhcc
Confidence 98876 99999888887777744444433
No 219
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.94 E-value=7.3e-08 Score=80.59 Aligned_cols=139 Identities=17% Similarity=0.110 Sum_probs=92.2
Q ss_pred HHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhh
Q 022127 115 TVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFI 194 (302)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 194 (302)
.+....++++........++|.|+++ .|+|..|.|.+.+...+..+++.++.|.++||.+++ ++.+ .+..+
T Consensus 6 rLs~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~-------~~~l-~~~~l 76 (400)
T PF03825_consen 6 RLSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSA-------KRIL-ALLSL 76 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhH-------HHHH-HHHHH
Confidence 45666777777888888999999999 789999999999999999999999999999999764 3333 34444
Q ss_pred hhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHH
Q 022127 195 GPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIG 263 (302)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i 263 (302)
+.++.+......++.+.......+...+.....+...+...+..+ +++.-+|-....+++|-.++...
T Consensus 77 ~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~-~~~~~YG~iRlwGSiGf~~~~~~ 144 (400)
T PF03825_consen 77 LSALALLLLAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG-DRGKDYGRIRLWGSIGFIVAALA 144 (400)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc-cccCCCCcchhhhhHHHHHHHHH
Confidence 444445454555555554444444443333334444444433332 34455566666666666666443
No 220
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.94 E-value=1.2e-08 Score=87.54 Aligned_cols=173 Identities=15% Similarity=0.145 Sum_probs=132.6
Q ss_pred HHHHHHHHhhhHHHHHH----HhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHH
Q 022127 114 WTVIIANITNNWGYFVL----LSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQ 189 (302)
Q Consensus 114 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 189 (302)
|...+..+......+++ ..+.+.+.++ ++.+..+.+++.++......+..++.+.+.||+|.|. ..
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~-f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~---------v~ 114 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDY-FGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRT---------VM 114 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHH-hCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchH---------HH
Confidence 44445554444444433 3344444444 8888888999999999999999999999999999653 33
Q ss_pred HHhhhhhHHHHHHhhcccchHHHHHHH-HHHHHHhhhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 022127 190 SIGFIGPGVSLLCLNYAKSPAVAAVLI-TIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFV 268 (302)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~ 268 (302)
+.+.++...++++..+.++.+..++.. .+.+.+.++.+.+....+...++++|+.++|+......+|..+-|.+...+.
T Consensus 115 i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~ 194 (509)
T KOG2504|consen 115 IAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLL 194 (509)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHH
Confidence 577778888888888888876655544 4445667777777778888899999999999999999999999999999999
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHhhcc
Q 022127 269 QWLGSFQAFLTVTAGLYFVTTIFWNLYST 297 (302)
Q Consensus 269 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (302)
+..| |+..++..+.+.+-..+.....++
T Consensus 195 ~~~G-~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 195 SKYG-WRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HHhC-cHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9998 999998888887666655555554
No 221
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.93 E-value=1.8e-07 Score=74.61 Aligned_cols=156 Identities=11% Similarity=0.085 Sum_probs=122.2
Q ss_pred HHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccc
Q 022127 129 VLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKS 208 (302)
Q Consensus 129 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (302)
+....++..-++ +|.|...+|++.++..++..+.++...++.+|+|.+ |.. ..+++...++...-... +
T Consensus 30 svgPLL~~Ir~~-~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~e-------r~l--~~~Llli~~G~~iR~~~-~ 98 (395)
T COG2807 30 SVGPLLDEIRQD-LGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEE-------RSL--FLALLLIAAGILIRSLG-G 98 (395)
T ss_pred hhhhhHHHHHHH-hcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhH-------HHH--HHHHHHHHHHHHHHhcc-c
Confidence 333444444444 899999999999999999999999999999999975 222 25555555555555444 3
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHH
Q 022127 209 PAVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVT 288 (302)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~ 288 (302)
.........+.+.+.+..+......+.+-+||+.+..+|++....++++++++.+.-.+.++.++|+..+...+...+++
T Consensus 99 ~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allA 178 (395)
T COG2807 99 LPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLA 178 (395)
T ss_pred HHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHH
Confidence 44445555555666666677778888999999999999999999999999999999999998867999999999999998
Q ss_pred HHHHHhh
Q 022127 289 TIFWNLY 295 (302)
Q Consensus 289 ~~~~~~~ 295 (302)
.+.++.-
T Consensus 179 l~~WlPq 185 (395)
T COG2807 179 LLIWLPQ 185 (395)
T ss_pred HHHHhhh
Confidence 8877654
No 222
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.90 E-value=1.5e-07 Score=78.97 Aligned_cols=124 Identities=15% Similarity=0.136 Sum_probs=82.1
Q ss_pred HHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchH--------HHHHHHHHHHHHhhhhhhh
Q 022127 158 GTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPA--------VAAVLITIALSLSSFSQAG 229 (302)
Q Consensus 158 ~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 229 (302)
+...+++++.|+++||+|||+. ...+.++..++.......++.. .......+.+.+.+...+.
T Consensus 46 ~~~~i~~~~~G~l~dr~g~r~~---------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 116 (394)
T TIGR00883 46 LARPLGAIVFGHFGDRIGRKKT---------LVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGG 116 (394)
T ss_pred HHhhhHHHHhhhhhhhhhhHHH---------HHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccc
Confidence 3445688999999999997532 2355555555555555555432 1222333334444445566
Q ss_pred hhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhc--------cccchhHHHHHHHHHHHHHHHH
Q 022127 230 YLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ--------WLGSFQAFLTVTAGLYFVTTIF 291 (302)
Q Consensus 230 ~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~--------~~g~~~~~~~~~~~~~~~~~~~ 291 (302)
......|..| ++|+...+..+....+|..+++.+.+.+.+ ..+ |+..+.+.+...+++...
T Consensus 117 ~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~-w~~~~~~~~~~~~~~~~~ 186 (394)
T TIGR00883 117 AALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWG-WRIPFLVSAVLVLIGLYL 186 (394)
T ss_pred cHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccc-hHHHHHHHHHHHHHHHHH
Confidence 6777888777 889999999999999999999988766542 333 888888777666555443
No 223
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.89 E-value=1.4e-07 Score=78.91 Aligned_cols=247 Identities=11% Similarity=-0.045 Sum_probs=145.1
Q ss_pred CccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhh----cCCCCCCCCCChHHHHHH
Q 022127 13 PSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKV----TNDPCNSPFVSKSELRLI 88 (302)
Q Consensus 13 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~----~~~p~~~~~~~~~~~~~~ 88 (302)
+++++.+.++...-.-.+..+++|++.|.+.+..+.+....+.+...++...+=++++ +..|+-+.+.++++.+..
T Consensus 143 ~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~ 222 (432)
T PF06963_consen 143 DPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESS 222 (432)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCcccccc
Confidence 3556788888888888899999999999999988988888877777776554433222 222321111111111000
Q ss_pred HhcC---ccc-----------ccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhh
Q 022127 89 QAGK---SDS-----------VKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSA 154 (302)
Q Consensus 89 ~~~~---~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 154 (302)
++.. +++ .-++...+|+..+++|.+.......+ .++...++...+..|+.. .|+++...|..-+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alal-LY~TVLsf~~lmt~yl~~-~G~s~~~igi~R~ 300 (432)
T PF06963_consen 223 SDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALAL-LYFTVLSFGGLMTAYLKS-QGYSPSVIGIFRG 300 (432)
T ss_pred ccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHH-HHHHHhcCcHHHHHHHHH-CCCCHHHHHHHHH
Confidence 0000 000 00112345777778776655444444 344455667788889998 4999999999999
Q ss_pred HHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhccc-ch---HHHHHHHHHHHHHhhhhhhhh
Q 022127 155 VPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK-SP---AVAAVLITIALSLSSFSQAGY 230 (302)
Q Consensus 155 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~ 230 (302)
...+.++.+.+...++.+|+|..+.... -...- ..++..++..+.....+ +. ...+....+.-.+.-..--..
T Consensus 301 ~gav~Gl~gT~~~p~l~~riGlvr~G~~--~l~~q-~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~ 377 (432)
T PF06963_consen 301 LGAVFGLLGTWVYPWLMKRIGLVRAGLW--SLWWQ-WVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAV 377 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhhHHH--HHHHH-HHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHH
Confidence 9999999999999999999997543211 00000 11122222222222211 11 111122222222222233344
Q ss_pred hhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHh
Q 022127 231 LLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGT 264 (302)
Q Consensus 231 ~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~ 264 (302)
.-..+|..| ++||+..|+-+...++...+.-.+.
T Consensus 378 ~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 378 TQIMQENVPESERGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred HHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 556677666 8899999999999998877655443
No 224
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.85 E-value=2.8e-07 Score=77.09 Aligned_cols=180 Identities=13% Similarity=0.063 Sum_probs=124.4
Q ss_pred HHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhh
Q 022127 115 TVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFI 194 (302)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 194 (302)
.....-+...........|+..|+.++.|.++..+|.+..+.-+.-++.-++.|.++||.++|.-. +|..+..+.+
T Consensus 16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~Gr----fRP~lL~g~i 91 (467)
T COG2211 16 GYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGR----FRPWLLWGAI 91 (467)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeeccccccccc----ccHHHHHHhH
Confidence 445555556667777789999999999999999999999999999999999999999988755433 3444445544
Q ss_pred hhHHHHHHhhccc------chHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc--chhhhHHHHHHHHHHHHHHHHHHHhhh
Q 022127 195 GPGVSLLCLNYAK------SPAVAAVLITIALSLSSFSQAGYLLNIQEIAP--DCAGFLHGIANSAGTLAAIISTIGTGY 266 (302)
Q Consensus 195 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~g~~~~~~~~g~~i~~~i~g~ 266 (302)
..++...+....+ +.....+...+...+......+..++..++.+ ++|.+..+.-....++|+.+...+.+.
T Consensus 92 p~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~p 171 (467)
T COG2211 92 PFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPP 171 (467)
T ss_pred HHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444333 23344455555556666667777788888664 889999999999999998887777766
Q ss_pred hhcccc------chhHHHHHHHHHHHHHHHHHHhhccC
Q 022127 267 FVQWLG------SFQAFLTVTAGLYFVTTIFWNLYSTG 298 (302)
Q Consensus 267 l~~~~g------~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (302)
+.+..| +|+....+.+++.++..+..+.-.||
T Consensus 172 lv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~E 209 (467)
T COG2211 172 LVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKE 209 (467)
T ss_pred HHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 665432 25555555555555555544444343
No 225
>PRK09848 glucuronide transporter; Provisional
Probab=98.83 E-value=3.9e-07 Score=78.10 Aligned_cols=145 Identities=16% Similarity=0.068 Sum_probs=84.5
Q ss_pred HHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhh
Q 022127 117 IIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGP 196 (302)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 196 (302)
.+..+...........+++.|+++..|+++.+.|.+.+...+...+..++.|+++||.++|.-. ||..+..+.+..
T Consensus 14 g~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr----~~~~~~~~~~~~ 89 (448)
T PRK09848 14 SLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGK----FRPFLLFGTAPL 89 (448)
T ss_pred ccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcC----chHHHHHHHHHH
Confidence 3344444555555667788899998999999999999999999999999999999998655322 232322332222
Q ss_pred H-HHHHHhhcc----cch--HHHHHHHHHHHHHhhhhhhhhhhHHhhhcc--chhhhHHHHHHHHHH-----HHHHHHHH
Q 022127 197 G-VSLLCLNYA----KSP--AVAAVLITIALSLSSFSQAGYLLNIQEIAP--DCAGFLHGIANSAGT-----LAAIISTI 262 (302)
Q Consensus 197 ~-~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~g~~~~~~~-----~g~~i~~~ 262 (302)
. .....+... ... ........+...+.+...++..+...+..+ ++|.+..+.-....+ ++..++|.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~ 169 (448)
T PRK09848 90 MIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPS 169 (448)
T ss_pred HHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 222222111 111 112222333344455555566666555443 667776665544333 34445555
Q ss_pred Hhh
Q 022127 263 GTG 265 (302)
Q Consensus 263 i~g 265 (302)
+.+
T Consensus 170 i~~ 172 (448)
T PRK09848 170 IKN 172 (448)
T ss_pred HHH
Confidence 544
No 226
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.83 E-value=2.6e-07 Score=80.50 Aligned_cols=134 Identities=13% Similarity=0.022 Sum_probs=106.6
Q ss_pred hhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhh
Q 022127 148 QAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQ 227 (302)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (302)
+.+++.+...++..++.++.|+++|++|||+ .+.++.+...++.+.....++.....+.-.+.+.+.+...
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~---------~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~ 160 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKK---------TLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGAS 160 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH---------HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhh
Confidence 4489999999999999999999999999763 2246666666777777777788888888888888888888
Q ss_pred hhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccc-cchhHHHHHHHHHHHHHHHH
Q 022127 228 AGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWL-GSFQAFLTVTAGLYFVTTIF 291 (302)
Q Consensus 228 ~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~-g~~~~~~~~~~~~~~~~~~~ 291 (302)
.....+.+|..| +.||...+..+....+|..++ .+.+...++. .+|+..+.+..+.+++-.+.
T Consensus 161 ~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~ 225 (513)
T KOG0254|consen 161 VLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG 225 (513)
T ss_pred hcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH
Confidence 888888999999 799999999999999887777 5556555543 24998887777777766666
No 227
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.83 E-value=5.4e-08 Score=82.88 Aligned_cols=148 Identities=12% Similarity=0.054 Sum_probs=113.5
Q ss_pred HhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHH
Q 022127 140 TVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIA 219 (302)
Q Consensus 140 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (302)
+..+....+.+...+.+.++.+++.+.++.+.||++-. +.+...+..- ++..++-....+.+..++.-++.
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls--------~~l~~~~~~w-~~~~~~~~~~~s~~~~ialr~ll 144 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLS--------KGLSVSGILW-GLFGFLTAAVHSFPGLIALRFLL 144 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChH--------HHHHHHHHHH-HHHHHHHHHHhhhHHHHHHHHHH
Confidence 44677778899999999999999999999999999832 2332222222 22222222356677778888888
Q ss_pred HHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhc------cccchhHHHHHHHHHHHHHHHHH
Q 022127 220 LSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ------WLGSFQAFLTVTAGLYFVTTIFW 292 (302)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~------~~g~~~~~~~~~~~~~~~~~~~~ 292 (302)
+.+.+..+|....++...+. ++|+..+|+.+...++|+++|+.+...+.+ .. +|++.|++.+++.+...++.
T Consensus 145 Gl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~-gW~~~FiI~G~i~~~~gi~~ 223 (495)
T KOG2533|consen 145 GLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLA-GWRWLFIIEGVITLVLGIVV 223 (495)
T ss_pred HHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcC-CceeehhHHHHHHHHHHheE
Confidence 88888899999999988887 899999999999999999999999988643 23 49999999998888777665
Q ss_pred Hhhcc
Q 022127 293 NLYST 297 (302)
Q Consensus 293 ~~~~~ 297 (302)
+++.+
T Consensus 224 f~~lp 228 (495)
T KOG2533|consen 224 FFFLP 228 (495)
T ss_pred EEEec
Confidence 55443
No 228
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.82 E-value=2e-06 Score=70.93 Aligned_cols=247 Identities=11% Similarity=0.018 Sum_probs=151.1
Q ss_pred hhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhh--cCCchHHHHHHHHHHHHHHHHHhhhcCCCCCC---CC
Q 022127 5 STLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST--IGISGPFILFSSLGLLWLSTWTSKVTNDPCNS---PF 79 (302)
Q Consensus 5 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~--~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~---~~ 79 (302)
.+++-...|+++-.++.+...+..-+|..++..+|-.+... .+.+...++ ...+....+++.+++|..++.. ++
T Consensus 115 ~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~i-sl~~~~~a~~~~~fLP~~~~S~~f~r~ 193 (412)
T PF01770_consen 115 YSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYI-SLASVSLALLIALFLPMPKRSLFFHRK 193 (412)
T ss_pred HHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH-HHHHHHHHHHHHHHcCCCCcccceecc
Confidence 46666777888889999999999999999999999877753 344444444 3333444445555577654411 11
Q ss_pred CCh------HHHHHHHhcCcc-----cccCCC-----------CcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHH
Q 022127 80 VSK------SELRLIQAGKSD-----SVKKRN-----------PPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIY 137 (302)
Q Consensus 80 ~~~------~~~~~~~~~~~~-----~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (302)
.++ .+.+..++..++ +.++.. ....++..+||.++...+-+.+...+++....|....
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~L 273 (412)
T PF01770_consen 194 PPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSL 273 (412)
T ss_pred CccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 100 000000000000 000000 1234556788999998888888888888888887777
Q ss_pred HHHh--hccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHH
Q 022127 138 FNTV--FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVL 215 (302)
Q Consensus 138 ~~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (302)
.++. -+-+....|..-+...+.+.++.+..|++-.++.+. .........++.+..++++...++.+.....
T Consensus 274 W~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~-------~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~ 346 (412)
T PF01770_consen 274 WDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRW-------GELALGVFSLLQAGLLFLMSFTGNIWVCYAG 346 (412)
T ss_pred HHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHH-------HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 7764 233445567777888888888999999885555432 2333334444555566666777788877777
Q ss_pred HHHHHHHhhhhhhhhhhHHhh-hccchhhhHHHHHHHHHHHHHHH
Q 022127 216 ITIALSLSSFSQAGYLLNIQE-IAPDCAGFLHGIANSAGTLAAII 259 (302)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~g~~~~~~~~g~~i 259 (302)
.++......+..+....-++. +..+.-|...|+.++..-+-..+
T Consensus 347 yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQti 391 (412)
T PF01770_consen 347 YIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQTI 391 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHh
Confidence 776666655555555444433 44467788888877665544433
No 229
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.80 E-value=4.5e-07 Score=71.76 Aligned_cols=280 Identities=12% Similarity=0.079 Sum_probs=166.5
Q ss_pred hhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhc--CCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCh
Q 022127 5 STLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI--GISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSK 82 (302)
Q Consensus 5 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 82 (302)
++++-+..+|+++.++.|.-.+..-.|...|..++..+.+.- ++...-.+ .............++|..+++.-...+
T Consensus 116 ysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~I-SL~~~~ia~~~A~fLP~v~rSl~f~~~ 194 (433)
T KOG3810|consen 116 YSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYI-SLAEVTIAVLLALFLPRVKRSLYFHRL 194 (433)
T ss_pred hheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchh-hHHHHHHHHHHHhhCCCCchhhhhhcc
Confidence 566777788999999999999999999999998888877543 33333333 222333334444556655432111001
Q ss_pred HHHHHHHhcCcccccCCC------------CcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhc-cchhhh
Q 022127 83 SELRLIQAGKSDSVKKRN------------PPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFN-VNLKQA 149 (302)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~~ 149 (302)
+++.. ..+.++...+.+ ..+.++..+||++....+-+.+...+++-...+....-++... -.....
T Consensus 195 ~~~~~-v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyN 273 (433)
T KOG3810|consen 195 EDKIS-VGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYN 273 (433)
T ss_pred cccce-eccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhc
Confidence 11100 111111111111 1134456788998888888888888888887777766666321 112233
Q ss_pred hHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhh
Q 022127 150 AWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAG 229 (302)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (302)
|..-....+.++++.+..|.+.-++.|. +..++.++....+..++.+...++.|...+...+......+..+.
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~-------g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~iti 346 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRW-------GDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITI 346 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchh-------hHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhH
Confidence 4455566777888888888886666554 445555666666666777777788877777776666655555554
Q ss_pred hhhHH-hhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc----------chhHHHHHHHHHHHHHHHHHHhhc
Q 022127 230 YLLNI-QEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG----------SFQAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 230 ~~~~~-~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g----------~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
....+ .++..+.-|...|+..++.-+-..+-.. ...|..| -|..-|.+.+++.+++........
T Consensus 347 A~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~---iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~ 421 (433)
T KOG3810|consen 347 ATFQIARNLSSELFGLVFGINTFVALILQSILTL---IVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLMC 421 (433)
T ss_pred HHHHHHHhhhhhhheeeeehHHHHHHHHHHhheE---EEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHHh
Confidence 44333 4455577888888877665554443333 2334322 244557777777777765544433
No 230
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.79 E-value=1.3e-07 Score=82.64 Aligned_cols=140 Identities=9% Similarity=0.037 Sum_probs=116.3
Q ss_pred HhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHH
Q 022127 140 TVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIA 219 (302)
Q Consensus 140 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (302)
+..+.+.....+..++..++..+|+++.|.++||+|||+ ....++++..++.+...+.++.+...+.-++.
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~---------~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~ 181 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKP---------VLLVSLLLFIIFGILTAFAPNYWMFLIFRFLS 181 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHH---------HHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 335667778888889999999999999999999999753 33467777777777788888998888888888
Q ss_pred HHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHH
Q 022127 220 LSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFW 292 (302)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 292 (302)
+++.+...........|..+ ++|+.+..+ ......++.+++...+++.. +|+..+++......+..+..
T Consensus 182 G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~~ 251 (521)
T KOG0255|consen 182 GFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLLW 251 (521)
T ss_pred HhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888888776 999999999 88888899999999999887 59999998888877766653
No 231
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.75 E-value=8.8e-07 Score=74.84 Aligned_cols=141 Identities=9% Similarity=0.039 Sum_probs=97.5
Q ss_pred hHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhh
Q 022127 150 AWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAG 229 (302)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (302)
+...++..+++++|++..++++||+|||+... +..+..+..++........++....+..-.+.+...+.....
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~------~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~ 136 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRKNALL------LSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGL 136 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHH------HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHH
Confidence 45667888999999999999999999873211 111222222223333333456667777778888788888888
Q ss_pred hhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHH-hhhhhccccchhHHHHHHHHHHHHHHHHHHhhc
Q 022127 230 YLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIG-TGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 230 ~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i-~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
...+..|..| +.||....+......+|..++..+ ...+.+....|...+....+.+++..+...++.
T Consensus 137 ~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~P 205 (485)
T KOG0569|consen 137 VPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLP 205 (485)
T ss_pred HHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCC
Confidence 8888999999 889999999999999998888544 344444433477777777766666665544433
No 232
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.74 E-value=1.3e-07 Score=79.36 Aligned_cols=275 Identities=13% Similarity=0.127 Sum_probs=146.2
Q ss_pred hhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhh--cC-----------CchHHHHHHHHHHHHHHHHHhhhcC
Q 022127 6 TLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST--IG-----------ISGPFILFSSLGLLWLSTWTSKVTN 72 (302)
Q Consensus 6 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~--~g-----------wr~~f~~~~~~~~~~~~~~~~~~~~ 72 (302)
+++++-...++|.++++....+..+|.++||.++..+..- -| +..+-|+.+++.++..+....+.+|
T Consensus 152 ~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E 231 (488)
T KOG2325|consen 152 AYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKE 231 (488)
T ss_pred HHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheee
Confidence 5677777788999999999999999999999888766531 11 3455677788888877777777888
Q ss_pred CCCCCCCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHH
Q 022127 73 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 152 (302)
Q Consensus 73 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~ 152 (302)
.+++..+.+.++. .++..+.++.+..+.++ +..+.+.+..+...+......+..+.+....++++.+++-..
T Consensus 232 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~------~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~ 303 (488)
T KOG2325|consen 232 VYRGIIDKKKRSV--EEEKSDIEKVKKPKLDW------VAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLY 303 (488)
T ss_pred cccCccccccccc--hhhccchhhhccCChhH------HHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHh
Confidence 7664432221111 00000001111111111 223445555555666666656666666666678776665544
Q ss_pred hhHHH-HHHHhhhh-hhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHh--hc--ccc----------------h-
Q 022127 153 SAVPW-GTMAVSGY-MAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCL--NY--AKS----------------P- 209 (302)
Q Consensus 153 ~~~~~-~~~~~~~~-~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~----------------~- 209 (302)
.+... +.+.+... ......-|+++.-. |+.+ ..+++......... ++ ... .
T Consensus 304 ~gi~~~~~g~ls~~~~l~~~f~~l~~i~~-----r~~~-~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~ 377 (488)
T KOG2325|consen 304 NGITLSISGILSVILLLLYIFTRLGKIDK-----RRII-LLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYS 377 (488)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhhhcc-----ceee-eehHHHHHHhhheeeeeccccccccccccccccCcCcccch
Confidence 43322 22222221 11222222222000 1111 12212211111111 11 000 0
Q ss_pred H-------HHHHHHHHHHHHhhhhhh----hhhhHHhh-hccchhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHH
Q 022127 210 A-------VAAVLITIALSLSSFSQA----GYLLNIQE-IAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAF 277 (302)
Q Consensus 210 ~-------~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~ 277 (302)
| .............+...| ...+.-++ +-|+++++..|++......+..++|.+........| ++..
T Consensus 378 wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g-~~~v 456 (488)
T KOG2325|consen 378 WCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSG-PRPV 456 (488)
T ss_pred hhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcC-ccHH
Confidence 0 001111111122333333 23344455 457999999999999999999999999999988887 7777
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 022127 278 LTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~ 295 (302)
+.+.....++...++.++
T Consensus 457 ~~~~~~~~l~~~~l~~~~ 474 (488)
T KOG2325|consen 457 WIILLCLLLVVAALWIVF 474 (488)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 777666666555554443
No 233
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.69 E-value=1.2e-06 Score=67.80 Aligned_cols=136 Identities=15% Similarity=0.028 Sum_probs=89.4
Q ss_pred hHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHh
Q 022127 124 NWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCL 203 (302)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (302)
....|.+..|.|..-+ .+|+|.+|...+.....++..+| +..|.+.||.|.+ ....++......+....
T Consensus 15 ~Gt~Y~Fs~yS~~Lk~-~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~---------~~l~iG~~~~~~GY~~~ 83 (250)
T PF06813_consen 15 SGTTYTFSAYSPQLKS-RLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPW---------VVLLIGAVLGFVGYGLL 83 (250)
T ss_pred cCcccchhhhhHHHHH-HhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchH---------HHHHHHHHHHHHHHHHH
Confidence 3455666677776554 59999999999998888888775 8889999999854 22335555555554443
Q ss_pred hc--c---c--chHHHHHHHHHHHHHhhhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 022127 204 NY--A---K--SPAVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQW 270 (302)
Q Consensus 204 ~~--~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~ 270 (302)
.. . + +.+......++++...............+.+|++||++.|+.-....+++++-..+...+.+.
T Consensus 84 ~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 84 WLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 32 1 1 222222222333222222223333334567799999999999999999999888888877765
No 234
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.66 E-value=9.3e-07 Score=74.12 Aligned_cols=179 Identities=10% Similarity=0.078 Sum_probs=135.9
Q ss_pred HhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHH
Q 022127 106 HLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVR 185 (302)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~ 185 (302)
+++.+++....++...+...+.....+++=-++++ .+..+.--|........+-++.-+..+++.+|+|+-+..
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~----- 439 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVM----- 439 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhccccee-----
Confidence 56777877766666666666666666777556777 665666667666666777778888889999999976532
Q ss_pred HHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHH-HHHHHHHHHH
Q 022127 186 KIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAG-TLAAIISTIG 263 (302)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~-~~g~~i~~~i 263 (302)
..++.+-..=++.+...+|+|..+..-.+-+...+..+....+++++..| +.++++.|+..... .+|-.+|+.+
T Consensus 440 ----~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslI 515 (618)
T KOG3762|consen 440 ----YLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLI 515 (618)
T ss_pred ----eehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhh
Confidence 24555555556666777889988888888888888889999999999887 88999999987665 5788999999
Q ss_pred hhhhhccccchhHHHHHHHHHHHHHHHHHHhh
Q 022127 264 TGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 264 ~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
+|.+.+..| -+..|..+++.+++..+....+
T Consensus 516 GG~~v~~fg-~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 516 GGFVVERFG-ARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred hhhhheeeh-hHHHHHHHHHHHHHHHHHHHHh
Confidence 999999987 7788888887777776665544
No 235
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.56 E-value=3.8e-05 Score=61.89 Aligned_cols=160 Identities=13% Similarity=0.084 Sum_probs=94.4
Q ss_pred hHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHh
Q 022127 124 NWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCL 203 (302)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (302)
..+.+....|.-...++ +|++..+.+.++......+.+...+.|.++||+|||+. . +..+++..++.+ .
T Consensus 47 ~~aDWLQGpY~Y~LY~~-yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~--------c-l~~cily~~scl-~ 115 (354)
T PF05631_consen 47 MAADWLQGPYLYALYES-YGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKA--------C-LLFCILYSLSCL-T 115 (354)
T ss_pred HHHHHhhcchhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH--------H-HHHHHHHHHHHH-H
Confidence 33433333333333444 89999999999999999999999999999999998632 1 233333333333 2
Q ss_pred hcccchHHHHHHHHHHHHHhhhhhhhhhhHH-hhh----cc-chhhhHHHHHHHH-HHHHHHHHHHHhhhhhccccc-hh
Q 022127 204 NYAKSPAVAAVLITIALSLSSFSQAGYLLNI-QEI----AP-DCAGFLHGIANSA-GTLAAIISTIGTGYFVQWLGS-FQ 275 (302)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~p-~~~~~~~g~~~~~-~~~g~~i~~~i~g~l~~~~g~-~~ 275 (302)
-..++....+..-++++..........-+.. .|. .| +..+...+..... ..+-.+.+..+.-.+.|..+. ..
T Consensus 116 k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~v 195 (354)
T PF05631_consen 116 KHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPV 195 (354)
T ss_pred HhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCc
Confidence 3345555556665666655555555442222 222 23 3345555544422 233444555555566665542 46
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 022127 276 AFLTVTAGLYFVTTIFWNL 294 (302)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~ 294 (302)
.+|.....+.+++.++...
T Consensus 196 aPF~~a~~~l~~~~~~I~~ 214 (354)
T PF05631_consen 196 APFDAAIVLLAVAAVLILK 214 (354)
T ss_pred chHHHHHHHHHHHHHHHHh
Confidence 7888888888777765543
No 236
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=98.55 E-value=4.8e-06 Score=63.66 Aligned_cols=239 Identities=16% Similarity=0.111 Sum_probs=114.9
Q ss_pred cchhhHHHHHhhhhhhHHHHHHHHHHHH---Hh--hcCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCChHHHHHHH
Q 022127 15 HERASAIGICMGGFHLGNVVGLLLTPIM---LS--TIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQ 89 (302)
Q Consensus 15 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l---~~--~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 89 (302)
|+|+..+.+...+.++|.++....--.- .+ .-.|++++.+.+++.++-.++...+-.| -+....+ |+++.
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~--fd~~~~~--~k~~k- 76 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKN--FDIYSPK--EKQEK- 76 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--ccccCcc--ccccc-
Confidence 5677888888888899988765442111 11 2369999999888887766555544222 1111111 11100
Q ss_pred hcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchh---------h----hhHHhhHH
Q 022127 90 AGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLK---------Q----AAWFSAVP 156 (302)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~---------~----~~~~~~~~ 156 (302)
++.+.+.+...++.+|+|..|...+.+...... ....+.+.........++. . ......+.
T Consensus 77 ----~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wLv~--~V~p~t~~~~~~~~~~s~~ni~~~~~~~~~~~~~~~~~I~f 150 (267)
T PF07672_consen 77 ----ENSTLSKKPSYKSILKEKETWKWILIYGIWLVV--VVFPFTPSWFNILIWISPANIKSVVSGGGFNWIIPIFQILF 150 (267)
T ss_pred ----ccccccccchHHHHHccchHHHHHHHHHHHhee--EEEeccchhHhHhhhcCcccccccccccccchhhHHHHHHH
Confidence 011112345789999999999877766554322 1122222333321122111 1 12222333
Q ss_pred HHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHh-hcccchHHHHHHHHHHHHHhhhh----hhhhh
Q 022127 157 WGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCL-NYAKSPAVAAVLITIALSLSSFS----QAGYL 231 (302)
Q Consensus 157 ~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 231 (302)
..+..+|.+..|...+.--+||.. -..+...+.+...+..+.. ....+.......+.+.++..|.+ .+...
T Consensus 151 v~g~~~G~~~ig~~nkt~~kRk~f----i~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ViL 226 (267)
T PF07672_consen 151 VAGYFLGPFTIGLWNKTNYKRKPF----IHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVIL 226 (267)
T ss_pred HHHHhhhceeeccchhhhhhhhhH----HHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHHh
Confidence 334445555555554443333221 1111223333333333332 12222211122222222222322 23333
Q ss_pred hHHhh---hccchhhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 022127 232 LNIQE---IAPDCAGFLHGIANSAGTLAAIISTIGTGYFV 268 (302)
Q Consensus 232 ~~~~~---~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~ 268 (302)
....| ..|++.|...|+.-.++++.-.+.-.+...+.
T Consensus 227 ~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S~i~ 266 (267)
T PF07672_consen 227 NLPHEYKGYNPKKIGIQFGLIWGFGYIFYTIYDIILSVIA 266 (267)
T ss_pred cChhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33333 34577888888888888887777766665554
No 237
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.50 E-value=0.00022 Score=60.72 Aligned_cols=167 Identities=11% Similarity=-0.019 Sum_probs=97.2
Q ss_pred hhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhh--------cCCc----hHHHHHHHHHHHHHHHHHhhhcC
Q 022127 5 STLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST--------IGIS----GPFILFSSLGLLWLSTWTSKVTN 72 (302)
Q Consensus 5 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~--------~gwr----~~f~~~~~~~~~~~~~~~~~~~~ 72 (302)
.++++|.++.+|-.|..++...+.++|.++++.+..++.+. -.|. ..+.+.++...+.. .+.+.+.+
T Consensus 151 W~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~-~~~~~l~~ 229 (472)
T TIGR00769 151 WGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAII-LLYWWVNR 229 (472)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHH-HHHHHHHh
Confidence 35678999999999999999999999999999998888732 1231 23333333333333 33333433
Q ss_pred CCCCCCCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhh---
Q 022127 73 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQA--- 149 (302)
Q Consensus 73 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--- 149 (302)
...+++...+.++ +..+++.+.....+.+.++++|.++.+++...++..+...+..-.-..+++.+. |+.+.
T Consensus 230 ~~~~~~~~~~~~~----~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p-~~~~~~~f 304 (472)
T TIGR00769 230 NVLTDPRSYNPAL----KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYP-SPNEYSAF 304 (472)
T ss_pred cccCCccccchhh----ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHH
Confidence 2222111111110 111111112223467788999999888888888777766666444445555443 33332
Q ss_pred -hHHhhHHHHHHHhhhhhhhcccchhhcc
Q 022127 150 -AWFSAVPWGTMAVSGYMAGKASDSLIKA 177 (302)
Q Consensus 150 -~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 177 (302)
|......++...+..+..+++.+|+|-+
T Consensus 305 ~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 305 MGDFSTWTGVVSVTMMLLSGNVIRKYGWL 333 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 2233344555555566668888888754
No 238
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.47 E-value=3.3e-07 Score=64.80 Aligned_cols=71 Identities=24% Similarity=0.425 Sum_probs=61.1
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcC
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 72 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 72 (302)
|...+++.|.+|+++|++.+++.+....+|..+++.+.+.+.+..+|++.+++.+...++..+...+..||
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 70 VAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred HhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 45567889999999999999999999999999999999999999999999999888777766666655443
No 239
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.46 E-value=3.6e-05 Score=66.03 Aligned_cols=142 Identities=15% Similarity=0.095 Sum_probs=93.7
Q ss_pred hHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc--ccchHHHHHHHHHHHHHhhhhh
Q 022127 150 AWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY--AKSPAVAAVLITIALSLSSFSQ 227 (302)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 227 (302)
++..++..+...+..+..|-++|+-++|| +.+ .....++.+....+.+ .++.+...++..+...+.....
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~~~~Rk-------~~l-~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~ 144 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADYGGRRK-------RFL-LIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASN 144 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccch-------HHH-HHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHH
Confidence 45667788888899999999999998873 333 3333333333333333 3344555556666666677777
Q ss_pred hhhhhHHhhhcc-chh--------------------------hhHHHHHHHHHHHHHHHHHHHhhhhhcccc-------c
Q 022127 228 AGYLLNIQEIAP-DCA--------------------------GFLHGIANSAGTLAAIISTIGTGYFVQWLG-------S 273 (302)
Q Consensus 228 ~~~~~~~~~~~p-~~~--------------------------~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g-------~ 273 (302)
...+++..++.+ +.+ ++.++.-...+++|+.+.-.+.-.+....+ +
T Consensus 145 vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~ 224 (477)
T PF11700_consen 145 VFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWA 224 (477)
T ss_pred HHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchh
Confidence 777888888876 555 899999999999998877766544432222 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccCc
Q 022127 274 FQAFLTVTAGLYFVTTIFWNLYSTGE 299 (302)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (302)
.+..+.+.++..++..+..++..+++
T Consensus 225 ~r~~~~~~a~ww~vfsiP~~~~~~~~ 250 (477)
T PF11700_consen 225 IRVAFLIVALWWLVFSIPLFLWLPDR 250 (477)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 47777777777666665555554443
No 240
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.44 E-value=1.6e-06 Score=53.99 Aligned_cols=63 Identities=14% Similarity=0.086 Sum_probs=56.4
Q ss_pred HHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccC
Q 022127 115 TVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAG 178 (302)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~ 178 (302)
.+-...++.+.+...+..++|.|+++ .|+|+.+.|.+.++..+...++.+++|.++||.++++
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~ 66 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRK 66 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccH
Confidence 34556677777888899999999998 8999999999999999999999999999999999874
No 241
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.37 E-value=1.3e-05 Score=68.13 Aligned_cols=158 Identities=22% Similarity=0.256 Sum_probs=105.1
Q ss_pred hhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhccc----ch
Q 022127 134 MPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK----SP 209 (302)
Q Consensus 134 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 209 (302)
...|+++++|.++.+...+.....+...+ .++.|.++|-+.-++.. ||.-+.++.++..+....+...+ +.
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~r----r~~Y~~i~~~~~~~~~~~~~~~~~~~~s~ 86 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYR----RKPYMIIGWLLGAVSALVLALLPASESSA 86 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCc----chHHHHHHHHHHHHHHHHHHhcccccchh
Confidence 34567778999999988887776665544 67889999987422221 45544566665544333333222 33
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHhhhc---cchhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHH
Q 022127 210 AVAAVLITIALSLSSFSQAGYLLNIQEIA---PDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYF 286 (302)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~ 286 (302)
......+.+...+.........+...|.. |+.+|...+.......+|+.++..+.|.+.+..+ ++..|.+.+.+..
T Consensus 87 ~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~-~~~~f~i~~~~~~ 165 (433)
T PF03092_consen 87 AIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG-PQGVFLISAALPL 165 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC-CeEEehHHHHHHH
Confidence 33444444555555555566666666654 4447888899999999999999999999998875 7888888777766
Q ss_pred HHHHHHHhhcc
Q 022127 287 VTTIFWNLYST 297 (302)
Q Consensus 287 ~~~~~~~~~~~ 297 (302)
+..+..+.+.+
T Consensus 166 l~~~~~~~~~~ 176 (433)
T PF03092_consen 166 LMLIVALFLLE 176 (433)
T ss_pred HHHHHHHHhhh
Confidence 66555544444
No 242
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.37 E-value=1.8e-05 Score=70.34 Aligned_cols=163 Identities=12% Similarity=0.005 Sum_probs=112.3
Q ss_pred HHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc
Q 022127 126 GYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY 205 (302)
Q Consensus 126 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (302)
.+|++...+..|+.+.+|++..++..+........-+..+++|+++|++-.| ++.+ ..+.++..++..++..
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~-------~~tI-l~~~ii~~lG~~llai 73 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGK-------FKTI-LYLSIVYVVGHALLSF 73 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------HHHH-HHHHHHHHHHHHHHHh
Confidence 3556677778888888999998888888877777888889999999986443 2222 2333344444443332
Q ss_pred ccc--------hHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-c---hhhhHHHHHHHHHHHHHHHHHHHhhhhhccc--
Q 022127 206 AKS--------PAVAAVLITIALSLSSFSQAGYLLNIQEIAP-D---CAGFLHGIANSAGTLAAIISTIGTGYFVQWL-- 271 (302)
Q Consensus 206 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~---~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~-- 271 (302)
... ....+..+.+..++.+..-+...+...|..+ + .+-....+.....++|+.+++.+.+++.+..
T Consensus 74 ~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~ 153 (654)
T TIGR00926 74 GAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGC 153 (654)
T ss_pred ccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 210 1223344555556666667777777776554 2 3677888899999999999999999987543
Q ss_pred -c---chhHHHHHHHHHHHHHHHHHHhhc
Q 022127 272 -G---SFQAFLTVTAGLYFVTTIFWNLYS 296 (302)
Q Consensus 272 -g---~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
| +|..+|.+.+++.+++.+++....
T Consensus 154 fg~~~~~~~aF~i~~i~m~ia~lvf~~g~ 182 (654)
T TIGR00926 154 FGCQDCYPLAFGVPAILMILALIVFMAGS 182 (654)
T ss_pred cccCcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 1 488899998888888887765433
No 243
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.33 E-value=1.4e-05 Score=67.35 Aligned_cols=177 Identities=11% Similarity=0.004 Sum_probs=108.1
Q ss_pred HHHHHHHHHhhhHHHHHHHhhhhHHHHH-hhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHH
Q 022127 113 SWTVIIANITNNWGYFVLLSWMPIYFNT-VFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSI 191 (302)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 191 (302)
++...+..++..........-.-.|+++ +.+.+.+..|+..+...++..++++..|+...|.++-+... +.
T Consensus 36 i~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pl--------i~ 107 (488)
T KOG2325|consen 36 IYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPL--------IV 107 (488)
T ss_pred HHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCH--------HH
Confidence 4455555555554444444444456655 35667788899999999999999999999999998632221 25
Q ss_pred hhhhhHHHHHHh---hcccc--hHHHHHHHHHHHHHhhhhhhhhhhHHhhh-ccchhhhHHHHHHHHHHHHHHHHHHHhh
Q 022127 192 GFIGPGVSLLCL---NYAKS--PAVAAVLITIALSLSSFSQAGYLLNIQEI-APDCAGFLHGIANSAGTLAAIISTIGTG 265 (302)
Q Consensus 192 ~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~g~~~~~~~~g~~i~~~i~g 265 (302)
+.+++.++.++. ...++ .+..+..-.+.+.+. ......-.++++. .+++|.++.+..+....+|.++||.+..
T Consensus 108 s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~-~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~ 186 (488)
T KOG2325|consen 108 SFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGV-GNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQL 186 (488)
T ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCc-ccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHH
Confidence 555555554443 22333 222222223332222 2234445666654 4588888888888877777777776655
Q ss_pred hhhcc------------ccchhHHHHHHHHHHHHHHHHHHhhccC
Q 022127 266 YFVQW------------LGSFQAFLTVTAGLYFVTTIFWNLYSTG 298 (302)
Q Consensus 266 ~l~~~------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (302)
.+... ...|..+-++.+.+.++..+....+.+|
T Consensus 187 ~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E 231 (488)
T KOG2325|consen 187 AFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKE 231 (488)
T ss_pred HHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheee
Confidence 44321 2246778888888888887776665554
No 244
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.28 E-value=1.7e-08 Score=86.56 Aligned_cols=136 Identities=12% Similarity=0.022 Sum_probs=101.3
Q ss_pred hhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhccc---chHHHHHHHHHHHHHhh
Q 022127 148 QAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK---SPAVAAVLITIALSLSS 224 (302)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 224 (302)
+.+...+...++..+|+++.|.++||+|||+.. ..+..+..++.++....+ +.+.....-.+.+++.+
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~---------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g 117 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPAL---------IISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIG 117 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccccccccc---------cccccccccccccccccccccccccccccccccccccc
Confidence 457788889999999999999999999988543 255566666666666666 66666666677777777
Q ss_pred hhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccc--cchhHHHHHHHHHHHHHHHHH
Q 022127 225 FSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWL--GSFQAFLTVTAGLYFVTTIFW 292 (302)
Q Consensus 225 ~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~ 292 (302)
........+..|..| ++|+...++.+....+|..++..+.-.+.+.. ..|+..+.+..+..++..+..
T Consensus 118 ~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~ 188 (451)
T PF00083_consen 118 GAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLR 188 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 778888888899887 88999999999888888887776654443221 138878777776665544433
No 245
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.27 E-value=0.00024 Score=58.86 Aligned_cols=237 Identities=16% Similarity=0.152 Sum_probs=113.7
Q ss_pred hHHHHHhhhhhhHHHHHHHHHHHHHhhcCC--chHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCChHH-----HHHHHhc
Q 022127 19 SAIGICMGGFHLGNVVGLLLTPIMLSTIGI--SGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSE-----LRLIQAG 91 (302)
Q Consensus 19 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw--r~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-----~~~~~~~ 91 (302)
...+-++++.+.+.++|+..-..+.+ .|+ |..+.+...+.++..+..++.+|+++.+++..+.++ .+..+++
T Consensus 143 ~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (402)
T PF02487_consen 143 SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESEDEAEDDLLESE 221 (402)
T ss_pred cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCCcccccccccc
Confidence 45688889999999999877655555 555 778888777777666666665654332221111111 0011111
Q ss_pred Cccc-ccCCCCcchHHhhc-CccHHHHHHHHHhhhHHHHHHH-hhhhHHHH-HhhccchhhhhHHhhHHHHHHHhhhhhh
Q 022127 92 KSDS-VKKRNPPSLRHLLS-KLPSWTVIIANITNNWGYFVLL-SWMPIYFN-TVFNVNLKQAAWFSAVPWGTMAVSGYMA 167 (302)
Q Consensus 92 ~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~ 167 (302)
..++ .+...+...++-++ -|......+-.+..++..|..+ ...|...- +...-...+..++...+.++-.+++--.
T Consensus 222 ~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~ 301 (402)
T PF02487_consen 222 TSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLLYQLGVFISRSSL 301 (402)
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHHHHHHHhhhhcce
Confidence 0000 01111122222221 1222223333333344444433 22233221 1111123444555566666666655332
Q ss_pred hcccchhhccCCchhHHHHHHHHHhhhhhHHH---HHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhh-hccchhh
Q 022127 168 GKASDSLIKAGYSLTLVRKIMQSIGFIGPGVS---LLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQE-IAPDCAG 243 (302)
Q Consensus 168 g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~ 243 (302)
..+ |+ |+ .++..+.-.+-.+. -....+.++.+......+.-+...|..+...+..+.+ ..|++|-
T Consensus 302 ~~~--ri--r~-------lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~RE 370 (402)
T PF02487_consen 302 PFF--RI--RR-------LWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDRE 370 (402)
T ss_pred eee--eh--hh-------HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHH
Confidence 221 22 11 11111111111111 1112224455655555555566666666666555554 4458999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhh
Q 022127 244 FLHGIANSAGTLAAIISTIGTGYF 267 (302)
Q Consensus 244 ~~~g~~~~~~~~g~~i~~~i~g~l 267 (302)
.++|.......+|..++..+.-.+
T Consensus 371 Fslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 371 FSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHH
Confidence 999999988888888777766544
No 246
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.22 E-value=7.7e-06 Score=67.55 Aligned_cols=112 Identities=13% Similarity=-0.071 Sum_probs=69.4
Q ss_pred cchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhccc-ch----HHHHHHHHH
Q 022127 144 VNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK-SP----AVAAVLITI 218 (302)
Q Consensus 144 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~ 218 (302)
+++...+.......++.++|.+..|++.||+|||+..-.. . +-++++.+ ...+.... ++ .+....-.+
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~--l----iImIi~t~-~~~~s~~~~~~~~~m~~L~~~R~~ 153 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKE--L----IIMIICSA-LSGLSVGTTSPLGVMMTLCFFRFL 153 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHH--H----HHHHHHHH-HhccCCCCCCCcchhhHHHHHHHH
Confidence 4556677788888999999999999999999998754211 1 11112222 22222221 22 222233344
Q ss_pred HHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHH
Q 022127 219 ALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTI 262 (302)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~ 262 (302)
.+++.|.=+|...+..+|... +.||+-.+.....+..|...|..
T Consensus 154 LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~i 198 (538)
T KOG0252|consen 154 LGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGI 198 (538)
T ss_pred hhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccH
Confidence 455666667888888888887 77888877766666655444433
No 247
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.19 E-value=9.4e-05 Score=59.76 Aligned_cols=150 Identities=13% Similarity=0.036 Sum_probs=104.4
Q ss_pred HhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchH
Q 022127 131 LSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPA 210 (302)
Q Consensus 131 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (302)
...+..-+++.-|.+..+..++......+..+++..+|.+.|++|||+... ...+...+.-..-...++..
T Consensus 97 ~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~---------~T~l~t~v~~~is~~spnf~ 167 (528)
T KOG0253|consen 97 LSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFN---------LTFLVTGVFGVISGASPNFA 167 (528)
T ss_pred HHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhh---------hhHHHHHHHHHhhcCCCCee
Confidence 333444456667888889999999999999999999999999999986432 34444444444445566666
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHH
Q 022127 211 VAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTT 289 (302)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~ 289 (302)
.....-.+.+++.+. .|...+.-.|..| .+|..-+-+. ....+|......+.-....+.| |++-+...+....+..
T Consensus 168 ~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~g-wr~~l~~~~~pl~~~a 244 (528)
T KOG0253|consen 168 SLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFG-WRYLLFTSSTPLMFAA 244 (528)
T ss_pred hhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHhHHHHHH
Confidence 666666666555554 5666666677777 6777666555 6777788888777777777776 9988887775555554
Q ss_pred HHH
Q 022127 290 IFW 292 (302)
Q Consensus 290 ~~~ 292 (302)
.+.
T Consensus 245 ~f~ 247 (528)
T KOG0253|consen 245 RFL 247 (528)
T ss_pred HHH
Confidence 443
No 248
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.15 E-value=0.0003 Score=60.27 Aligned_cols=167 Identities=10% Similarity=-0.004 Sum_probs=97.7
Q ss_pred hhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHh---------hcCCchHHHHHHHHHHH---HHHHHHhhhcCC
Q 022127 6 TLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS---------TIGISGPFILFSSLGLL---WLSTWTSKVTND 73 (302)
Q Consensus 6 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---------~~gwr~~f~~~~~~~~~---~~~~~~~~~~~~ 73 (302)
.+..|.++.+|-.|..++...+.++|.+++..+..++.+ ...|.........+.++ ........+.+.
T Consensus 167 ~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~ 246 (491)
T PF03219_consen 167 GFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKN 246 (491)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999999999999999999888877 12455433222211111 111222223222
Q ss_pred CCCCCCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhh----h
Q 022127 74 PCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQ----A 149 (302)
Q Consensus 74 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~----~ 149 (302)
..+++... +...++.+++.+.....+.+.++|+|.+..+++...+++.....+....-..+++.+. |+.+ .
T Consensus 247 vl~~~~~~----~~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~-~~~~ysafm 321 (491)
T PF03219_consen 247 VLTDPRFY----PSAKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYP-DPNDYSAFM 321 (491)
T ss_pred ccCccccc----hhhhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CchHHHHHH
Confidence 21111110 0001111111112223467788899999998888888888777776555555555443 3332 2
Q ss_pred hHHhhHHHHHHHhhhhhhhcccchhhcc
Q 022127 150 AWFSAVPWGTMAVSGYMAGKASDSLIKA 177 (302)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 177 (302)
|-.....++...+..++++.+.+|+|-+
T Consensus 322 G~~~~~tGivtii~~~l~~~iir~~GW~ 349 (491)
T PF03219_consen 322 GKFSSWTGIVTIIMMFLSSNIIRRFGWR 349 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 3344455666666667778888887755
No 249
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.10 E-value=0.00034 Score=57.50 Aligned_cols=131 Identities=17% Similarity=0.068 Sum_probs=83.5
Q ss_pred HhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhh-----ccCCchhHHHHHHHHHhhhhhHHHHHHhhc-----ccch
Q 022127 140 TVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLI-----KAGYSLTLVRKIMQSIGFIGPGVSLLCLNY-----AKSP 209 (302)
Q Consensus 140 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 209 (302)
.+++.+..-.+.+.+...+.. ..++..|+.+|+.+ ||...+.. -......+..+.......+.. ..+.
T Consensus 8 vEL~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~-G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~ 85 (403)
T PF03209_consen 8 VELGVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWG-GTLLQAGGLAIAPFALLLLAESGQQSSGPF 85 (403)
T ss_pred HHhccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHH-HHHHHHHHHHHHHHHHHHHccccccccccc
Confidence 347888888887777766655 46899999999988 55433221 111111222222222222222 0122
Q ss_pred HH----HHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 022127 210 AV----AAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 272 (302)
Q Consensus 210 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g 272 (302)
+. ....+.+.+.+.........+...|..| |+|+++.++.....-+|..++..+.|.+.|.+.
T Consensus 86 ~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s 153 (403)
T PF03209_consen 86 WLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFS 153 (403)
T ss_pred HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccC
Confidence 22 2233344444555556667788899887 889999999999999999999999999998865
No 250
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.04 E-value=0.00017 Score=61.41 Aligned_cols=130 Identities=15% Similarity=0.143 Sum_probs=88.9
Q ss_pred HHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhhhHHhh
Q 022127 157 WGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQE 236 (302)
Q Consensus 157 ~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (302)
++...+.++..|.++||+|||... ........+......+.. ++..+... ..++.........++.+|
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L---------~~~~~~~~l~~~~~~~~~--~~~~~~~~-l~g~~~~~~s~~~a~vad 139 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVL---------LLPLFGTILPALCLLFQG--YWFFLLLG-LSGGFSAIFSVGFAYVAD 139 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhH---------HHHHHHHHHhHHHHHHHH--HHHhhhcc-cccchhhhhhhhhhheee
Confidence 677888899999999999987432 122222222222222211 22222111 122333445566777788
Q ss_pred hcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHhhccCc
Q 022127 237 IAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGE 299 (302)
Q Consensus 237 ~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (302)
... ++|....|+.+.....+..++|.+.+.+.+..| +..++.+..+..+++.+...+..+++
T Consensus 140 is~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~-~a~~f~ia~~~~~~~~~y~~~~l~Es 202 (463)
T KOG2816|consen 140 ISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLG-IALVFLIAAASGILSLLYMLLFLPES 202 (463)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHhhccccc
Confidence 776 889999999999999999999999999998865 88899999998888887776665543
No 251
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.92 E-value=0.00035 Score=57.93 Aligned_cols=126 Identities=14% Similarity=0.066 Sum_probs=78.4
Q ss_pred hHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcc--c---ch
Q 022127 135 PIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA--K---SP 209 (302)
Q Consensus 135 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~ 209 (302)
..|.++.+| +...+-+...++.+..+...+.+-|+.||.|-|.. . .++...-+++...-... + +.
T Consensus 68 ~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a--------~-llgt~ln~iGa~Ir~iss~p~v~~~ 137 (480)
T KOG2563|consen 68 NNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTA--------L-LLGTVLNGIGAWIRLISSLPFVPPL 137 (480)
T ss_pred HHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHH--------H-HHHHHHHHHHHHHhhhccCcccccc
Confidence 345666677 66777788889999999999999999999996521 1 23333333333222211 1 21
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhH----Hhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 022127 210 AVAAVLITIALSLSSFSQAGYLLN----IQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWL 271 (302)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~ 271 (302)
... -+...+....+...+..... ....+| ++|+++..+..+...+|.+++..+-..+..+.
T Consensus 138 f~~-~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 138 FRR-PLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred chh-hhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 111 12233333333333333222 233444 99999999999998999999988888887654
No 252
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.86 E-value=0.0047 Score=52.34 Aligned_cols=246 Identities=13% Similarity=-0.012 Sum_probs=126.9
Q ss_pred hhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhc--------CCc-hHH----------HHHHHHHHHHH-
Q 022127 4 MSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI--------GIS-GPF----------ILFSSLGLLWL- 63 (302)
Q Consensus 4 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--------gwr-~~f----------~~~~~~~~~~~- 63 (302)
--.+++|..+++++.+..++.......+.++|......+..+- +-+ ..+ .+.+++..+..
T Consensus 123 qG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l 202 (461)
T KOG3098|consen 123 QGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVL 202 (461)
T ss_pred cceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHH
Confidence 3467889999999999999999999999998876654432211 111 111 11111111100
Q ss_pred -HHHHhhhcCCCCCCCCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHh-
Q 022127 64 -STWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTV- 141 (302)
Q Consensus 64 -~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 141 (302)
+....+.|. +.. ..+++..+ +...+......+++++|++..+....+.......-.....|..+.-.
T Consensus 203 ~~i~~~~~p~---~~~---~~~~~~~~-----~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~ 271 (461)
T KOG3098|consen 203 SIINFDFLPS---KDV---VNCKSSSE-----TSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTR 271 (461)
T ss_pred HhhheeecCc---cch---hhhhhhcc-----ccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhh
Confidence 001111111 100 00000000 00000011234567778887777666665555544555666555432
Q ss_pred -hccch-hhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc--c------c----
Q 022127 142 -FNVNL-KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY--A------K---- 207 (302)
Q Consensus 142 -~g~s~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~---- 207 (302)
.+.+. ...+......+++..++....+.+.+|.++... +..+.++..+.....++... . +
T Consensus 272 ~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~------~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~ 345 (461)
T KOG3098|consen 272 KLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGR------KPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSP 345 (461)
T ss_pred hccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhccc------CcchhHHHHHHHHHHHHHhccccccCCCCCCccc
Confidence 22222 233444455667777777777888877765532 22222333333333322211 1 0
Q ss_pred ------chHHHHHHHHHHHHHhhhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhhh
Q 022127 208 ------SPAVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGY 266 (302)
Q Consensus 208 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~ 266 (302)
+.....++..+.+..-.......+....+..|++|.++.++...-+.+++.++-.....
T Consensus 346 ~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 346 PLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred ccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 11223333344444444455666777788889999999999888888877776655554
No 253
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.85 E-value=0.0013 Score=53.28 Aligned_cols=146 Identities=10% Similarity=0.042 Sum_probs=91.8
Q ss_pred cCccchhhHHHHHh-hhhhhHHHHHHHHHHHHHhhcCC--chHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCChHHHHHH
Q 022127 12 FPSHERASAIGICM-GGFHLGNVVGLLLTPIMLSTIGI--SGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLI 88 (302)
Q Consensus 12 ~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~gw--r~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 88 (302)
+|++..+.-++... ...++-.+.+..++..+.+..+. ..+|....++..+..+++...-+|+..+..+.++ ..+..
T Consensus 155 ~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~-~~~~~ 233 (354)
T PF05631_consen 155 FPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSS-LSGSF 233 (354)
T ss_pred CChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccc-hHHHH
Confidence 34444444444444 33444556666667777776654 7888887776666666555555565443221111 11111
Q ss_pred HhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHH-hhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhh
Q 022127 89 QAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLL-SWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMA 167 (302)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~ 167 (302)
+..++.+.+||+++.+.+...+.....+.+. .|.|..-.+ + +....|++.+..+...++|+-+.
T Consensus 234 ------------~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~--~-~~~P~GlIFssFM~a~MlGS~lf 298 (354)
T PF05631_consen 234 ------------REAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPD--D-EELPLGLIFSSFMVAMMLGSSLF 298 (354)
T ss_pred ------------HHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCC--C-CCCCchHHHHHHHHHHHHHHHHH
Confidence 1246778889999999999999988888876 666654421 1 23457899999999999999887
Q ss_pred hcccch
Q 022127 168 GKASDS 173 (302)
Q Consensus 168 g~l~dr 173 (302)
.++..+
T Consensus 299 ~~l~s~ 304 (354)
T PF05631_consen 299 SRLLSK 304 (354)
T ss_pred HHHHhC
Confidence 655443
No 254
>PRK03612 spermidine synthase; Provisional
Probab=97.84 E-value=0.0028 Score=55.24 Aligned_cols=160 Identities=11% Similarity=0.057 Sum_probs=85.9
Q ss_pred HHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhh
Q 022127 116 VIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIG 195 (302)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 195 (302)
+....+...++...........+...+|-+....+.+.+.+..+..+|+.+++++.++..++. ...-..++.+.
T Consensus 19 l~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~------~~~e~~i~l~~ 92 (521)
T PRK03612 19 LLAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGF------VAVELLLALLG 92 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH------HHHHHHHHHHH
Confidence 344444555555556666666677778888888888999999999999988887753322110 00000111111
Q ss_pred hHHHHHH---hhcccch-HHHHHHHHHHHHHhhhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhhc-c
Q 022127 196 PGVSLLC---LNYAKSP-AVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQ-W 270 (302)
Q Consensus 196 ~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~-~ 270 (302)
.....++ ..+.... ........+..++.|...|.......+...++.+...|-......+|+.+|+.+.+++.- .
T Consensus 93 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~ 172 (521)
T PRK03612 93 GLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPR 172 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHh
Confidence 0100111 1111111 111122222334445444444444433333345677888888999999999999888764 5
Q ss_pred ccchhHHHHHH
Q 022127 271 LGSFQAFLTVT 281 (302)
Q Consensus 271 ~g~~~~~~~~~ 281 (302)
.|.....+.+.
T Consensus 173 lG~~~t~~~~a 183 (521)
T PRK03612 173 LGLIRTAALTG 183 (521)
T ss_pred cchHHHHHHHH
Confidence 66334444333
No 255
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.76 E-value=7.5e-05 Score=61.83 Aligned_cols=263 Identities=15% Similarity=0.118 Sum_probs=130.7
Q ss_pred hhhhhhcccCccchhh-HHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHH--HHHHHHHHHHHHHhhh-------cCC
Q 022127 4 MSTLTSRWFPSHERAS-AIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFIL--FSSLGLLWLSTWTSKV-------TND 73 (302)
Q Consensus 4 ~~~~i~~~~~~~~r~~-~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~--~~~~~~~~~~~~~~~~-------~~~ 73 (302)
+-+++.|...++++.+ +++++.....+|..+|..++++. +|+-.|-. ....-+.+..+-..+. +++
T Consensus 163 ~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~----~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~ 238 (498)
T KOG0637|consen 163 CRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL----GLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIET 238 (498)
T ss_pred HHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc----CceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheec
Confidence 4467888888776666 99999999999999999988744 55433322 1111111111111111 111
Q ss_pred ------CCCCCCCChHHHHHHHhcCcccccCCCCcchHH---hh--cCccHHHHHHHHHhhhHHHHHHHhhhhHHHH-Hh
Q 022127 74 ------PCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRH---LL--SKLPSWTVIIANITNNWGYFVLLSWMPIYFN-TV 141 (302)
Q Consensus 74 ------p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 141 (302)
|++++..++. .+.+.+..+.....+ .+ ..|..+.+.+...+...+.+.+..+...++- +.
T Consensus 239 ~~~l~~~~~~~~s~~~--------~~~~~~~~~~~~~~e~fG~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~v 310 (498)
T KOG0637|consen 239 SESLWYPQEKPLSPKG--------TTARSKSSKLPFLLEIFGALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREV 310 (498)
T ss_pred ccccccccccCCCCCc--------ccccccccCcchHHHHhchHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHh
Confidence 1111111110 000000000001111 11 2367888888888888888888877777763 34
Q ss_pred hccchhh----------------hhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhc
Q 022127 142 FNVNLKQ----------------AAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY 205 (302)
Q Consensus 142 ~g~s~~~----------------~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (302)
++-|+.. -.+=..+..+...+.+....++.||+|.|+......+. ..++..+...
T Consensus 311 y~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~---------f~~~~~~~gl 381 (498)
T KOG0637|consen 311 YGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNA---------FGLATGLAGL 381 (498)
T ss_pred hCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHH---------HHHHHHHHhh
Confidence 5444321 12334456667777888888999999965433221111 1111111111
Q ss_pred ccchHHHHHHHHHHHHH---------------------hhhhhhhhhhHHhh-hcc--chhhhHHHHHHHHHHHHHHHHH
Q 022127 206 AKSPAVAAVLITIALSL---------------------SSFSQAGYLLNIQE-IAP--DCAGFLHGIANSAGTLAAIIST 261 (302)
Q Consensus 206 ~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~-~~p--~~~~~~~g~~~~~~~~g~~i~~ 261 (302)
..+.+....-....+.. ....+...++..+. ..+ .-+|...|+.|....+...+..
T Consensus 382 ~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs 461 (498)
T KOG0637|consen 382 VLNTYVVLSHRSTAGILSSPLLTVPYGALALYAILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVS 461 (498)
T ss_pred hhhHHHHHHHHhhcceeecchhcccHHHHHHHHHhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheee
Confidence 11111111111111100 01111111222211 111 2257778888888888999888
Q ss_pred HHhhhhhccccchhHHHHHHHHHHHH
Q 022127 262 IGTGYFVQWLGSFQAFLTVTAGLYFV 287 (302)
Q Consensus 262 ~i~g~l~~~~g~~~~~~~~~~~~~~~ 287 (302)
...|.+.|..|+-+.+-...++..+.
T Consensus 462 ~~~Gp~~~~~G~~~~~~~~~~a~s~~ 487 (498)
T KOG0637|consen 462 LGLGPLDQLFGGGNLPAFVSGAVALL 487 (498)
T ss_pred ccccchhhhcCCcchhHHHHHHHHHH
Confidence 88888888877555544444444433
No 256
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.67 E-value=0.0035 Score=51.12 Aligned_cols=245 Identities=13% Similarity=0.002 Sum_probs=123.7
Q ss_pred ccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHh-------hcCCc---------hHHHHHHHHHHHHHHHHHhhhcCCC
Q 022127 11 WFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS-------TIGIS---------GPFILFSSLGLLWLSTWTSKVTNDP 74 (302)
Q Consensus 11 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~gwr---------~~f~~~~~~~~~~~~~~~~~~~~~p 74 (302)
...+++.|.+......+.+.|..++..+--.+.+ ..+|. ...+..+.+.++...+..+.-+|.+
T Consensus 161 mLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~ 240 (510)
T KOG3574|consen 161 MLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKEND 240 (510)
T ss_pred hcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 3456777777777777777777666544322221 11333 2233445555554444444322222
Q ss_pred CCCCCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhh
Q 022127 75 CNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSA 154 (302)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 154 (302)
++ .++++...+. +...-.+++++-|.+..++......-.++.+-....+.-+.| .|.+.++.+....
T Consensus 241 ~~---~~~e~~~~i~---------~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v 307 (510)
T KOG3574|consen 241 ES---VDEELELGIH---------ESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAV 307 (510)
T ss_pred hh---hhhhhhcCHH---------HHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeee
Confidence 21 1111100000 011135677888888888888888888887777777777777 7999988877764
Q ss_pred HHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhh-HHHHHHhhcccc-----h-HHHHHHHHHHHHHhhhh-
Q 022127 155 VPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGP-GVSLLCLNYAKS-----P-AVAAVLITIALSLSSFS- 226 (302)
Q Consensus 155 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~- 226 (302)
...-..++.....|++.....+-.... |....=+..... ............ + ...+...+...+...+.
T Consensus 308 ~~~plqI~l~~~~gk~ta~~~pl~~~l---ka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~t 384 (510)
T KOG3574|consen 308 PLVPLQIALPLYIGKWTAGPRPLNVFL---KAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVT 384 (510)
T ss_pred ehhhHHHhhhhhheeecCCCCcchHHH---HhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHH
Confidence 444444444444444433211111111 111111111111 111111111111 1 11122221122222222
Q ss_pred --hhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 022127 227 --QAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWL 271 (302)
Q Consensus 227 --~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~ 271 (302)
+....+..+++.+ ...|+.+.+.|+..++|+-.=..+..++.|..
T Consensus 385 s~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~l 432 (510)
T KOG3574|consen 385 SMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGL 432 (510)
T ss_pred HHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccC
Confidence 2223333455555 77899999999999999988888888887753
No 257
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.65 E-value=0.0065 Score=52.04 Aligned_cols=148 Identities=15% Similarity=0.043 Sum_probs=84.6
Q ss_pred cHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhcc-----chhhhhHHhhHHHHHHHhh-hhhhhcccchhhccCCchhHHH
Q 022127 112 PSWTVIIANITNNWGYFVLLSWMPIYFNTVFNV-----NLKQAAWFSAVPWGTMAVS-GYMAGKASDSLIKAGYSLTLVR 185 (302)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----s~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~~~~~~~~~~~~ 185 (302)
++....+..++..+.++.. --++|.... +.+...++-....+...+. .++.+++++|++|++.....
T Consensus 8 k~~~~~l~fF~il~~Y~iL-----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~-- 80 (472)
T TIGR00769 8 KFLPLFLMFFCILFNYTIL-----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTV-- 80 (472)
T ss_pred HHHHHHHHHHHHHHHHHHH-----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHH--
Confidence 4445555555544443332 223554544 3356666666665655555 78899999999987543211
Q ss_pred HHHHHHhhhhhHHHHHHhhcccc--------------------------hHHHHHHHHHHHHHhhhhhh-hhhhHHhhhc
Q 022127 186 KIMQSIGFIGPGVSLLCLNYAKS--------------------------PAVAAVLITIALSLSSFSQA-GYLLNIQEIA 238 (302)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 238 (302)
.............++.+..+. .|.........-.......+ ..+..++|..
T Consensus 81 --~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~ 158 (472)
T TIGR00769 81 --ISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQIT 158 (472)
T ss_pred --HHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 000111111111111111111 12222223333334444444 6688889988
Q ss_pred c-chhhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 022127 239 P-DCAGFLHGIANSAGTLAAIISTIGTGYFV 268 (302)
Q Consensus 239 p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~ 268 (302)
. ++..+-.++.....++|..+++.+..++.
T Consensus 159 t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 159 TIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7 88899999999999999999999998876
No 258
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.62 E-value=0.00011 Score=60.99 Aligned_cols=152 Identities=16% Similarity=0.115 Sum_probs=100.7
Q ss_pred ccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHH
Q 022127 111 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS 190 (302)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 190 (302)
++........+...++...-..+.|+|+++ .|.+.+..+....+..+.+.+..++.|..+||...|... ||..+.
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GR----RRPfI~ 106 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGR----RRPFIL 106 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceeccccccccccccccccc----ccchHH
Confidence 344555566666677777778999999999 899998888888888889999999999999975433222 333334
Q ss_pred HhhhhhHHHHHHhhccc--------c-----hHHHHHHHHH----HHHHhhhhhhhhhhHHhhhcc-chhhh-HHHHHHH
Q 022127 191 IGFIGPGVSLLCLNYAK--------S-----PAVAAVLITI----ALSLSSFSQAGYLLNIQEIAP-DCAGF-LHGIANS 251 (302)
Q Consensus 191 ~~~~~~~~~~~~~~~~~--------~-----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~p-~~~~~-~~g~~~~ 251 (302)
.+.....+.++++.+.. + ....+....+ .-+.......+.-+...|+.. +++.+ +++....
T Consensus 107 ~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~ 186 (498)
T KOG0637|consen 107 AGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSF 186 (498)
T ss_pred HhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHH
Confidence 55555555555544421 1 1122222222 223444556677788888775 55555 8888888
Q ss_pred HHHHHHHHHHHHhhhh
Q 022127 252 AGTLAAIISTIGTGYF 267 (302)
Q Consensus 252 ~~~~g~~i~~~i~g~l 267 (302)
+..+|+.+|-.+.++.
T Consensus 187 f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 187 FMAVGNVLGYALGSYL 202 (498)
T ss_pred HHHhcceeeeeccccc
Confidence 8888888877766643
No 259
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.62 E-value=0.0012 Score=54.57 Aligned_cols=159 Identities=16% Similarity=0.090 Sum_probs=99.6
Q ss_pred HHhhhhHHHHHhhcc---ch----hhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHH
Q 022127 130 LLSWMPIYFNTVFNV---NL----KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLC 202 (302)
Q Consensus 130 ~~~~~~~~~~~~~g~---s~----~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (302)
..+++|.|++++.+. ++ ...++..++..+...+-+++.|.++|+.|+||.. +. ....+..+....
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~-------~~-~f~~i~i~~~~~ 105 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKF-------FG-FFTAIGIISTFL 105 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchH-------HH-HHHHHHHHHHHH
Confidence 446778888876554 33 3445666777888888889999999999998532 22 333333333333
Q ss_pred hhccc---chHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHh--hhhh--------
Q 022127 203 LNYAK---SPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGT--GYFV-------- 268 (302)
Q Consensus 203 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~--g~l~-------- 268 (302)
+.+.+ +.+..+..+.+............++.+.++.+ ++.++.++.-...+++|+.+.-... +.+.
T Consensus 106 L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~ 185 (438)
T COG2270 106 LWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITI 185 (438)
T ss_pred HHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeE
Confidence 33332 33444455555566666777777888888877 6677888888888888776554442 1111
Q ss_pred --------ccccchhHHHHHHHHHHHHHHHHHHhhcc
Q 022127 269 --------QWLGSFQAFLTVTAGLYFVTTIFWNLYST 297 (302)
Q Consensus 269 --------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (302)
|.. .-+..+.+.++-.++..+-.+...+
T Consensus 186 ~l~~l~~~~~~-~~ri~~~l~A~W~li~~iPm~~~v~ 221 (438)
T COG2270 186 ILLGLPPADGE-DVRITGLLAALWWLLFALPMILNVH 221 (438)
T ss_pred EeeccCccccc-cchhHHHHHHHHHHHHHhHHHhccc
Confidence 111 3566777777777766665555443
No 260
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.60 E-value=0.035 Score=47.11 Aligned_cols=165 Identities=9% Similarity=0.019 Sum_probs=89.9
Q ss_pred hhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhc-C---------CchHHHHHHHHHHHHHHHHHhhhcC-CCC
Q 022127 7 LTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-G---------ISGPFILFSSLGLLWLSTWTSKVTN-DPC 75 (302)
Q Consensus 7 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-g---------wr~~f~~~~~~~~~~~~~~~~~~~~-~p~ 75 (302)
...|....+|-.|..+.++.+.+++..++..+..++.++. . -+..+.+.+..+++...+..+ +.+ .++
T Consensus 172 faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~-~~r~il~ 250 (509)
T COG3202 172 FANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRY-INRNVLT 250 (509)
T ss_pred HHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhccc
Confidence 4578888899999999999999999999999988887521 1 233444444444443333333 322 111
Q ss_pred CCCCCChHHHHHHHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhH---H
Q 022127 76 NSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAW---F 152 (302)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~---~ 152 (302)
++... .++ ..++.++..+..-..+.+.+.|+|.++.+.+...+++.+.+.+....-.-.++.+..+.+..++ +
T Consensus 251 ~~~f~-~~~---~~kk~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~ 326 (509)
T COG3202 251 DPLFY-LRA---KKKKKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRF 326 (509)
T ss_pred Ccchh-HHH---hcccccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHH
Confidence 11100 000 0000000111112235677888899988888888888777666533333333323333333222 3
Q ss_pred hhHHHHH-HHhhhhhhhcccchhhc
Q 022127 153 SAVPWGT-MAVSGYMAGKASDSLIK 176 (302)
Q Consensus 153 ~~~~~~~-~~~~~~~~g~l~dr~~~ 176 (302)
....++. .++...+++.+.+|.|-
T Consensus 327 ~~~tgvv~~v~~~~~~s~~ir~~GW 351 (509)
T COG3202 327 QIWTGVVSLVVFLFPGSNLIRRVGW 351 (509)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHhhH
Confidence 3344444 34444667777777764
No 261
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.48 E-value=0.0065 Score=54.43 Aligned_cols=66 Identities=18% Similarity=0.274 Sum_probs=51.5
Q ss_pred chhhhhhhcccCcc---chhhHHHHHhhhhhhHHHHHHHHHHHHHhhc-------CCchHHHHHHHHHHHHHHHHH
Q 022127 2 PAMSTLTSRWFPSH---ERASAIGICMGGFHLGNVVGLLLTPIMLSTI-------GISGPFILFSSLGLLWLSTWT 67 (302)
Q Consensus 2 p~~~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-------gwr~~f~~~~~~~~~~~~~~~ 67 (302)
|+..+...|.++++ +|-+.+.++..+.++|..+++.+.+++.+.. +|...|.+.++..++..++..
T Consensus 104 p~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 104 PCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred cCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHH
Confidence 55667788888754 3677889999999999999999999887543 699999998887776554443
No 262
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.46 E-value=0.022 Score=48.40 Aligned_cols=254 Identities=15% Similarity=0.102 Sum_probs=120.8
Q ss_pred cCccchhhHHHHHhhhhhhHHHHHHHHHHHHHh-----hc--------C---CchHHHHHHHHHHHHHHHHHhhhcCCCC
Q 022127 12 FPSHERASAIGICMGGFHLGNVVGLLLTPIMLS-----TI--------G---ISGPFILFSSLGLLWLSTWTSKVTNDPC 75 (302)
Q Consensus 12 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-----~~--------g---wr~~f~~~~~~~~~~~~~~~~~~~~~p~ 75 (302)
..+++++.+......+.+.|..++..+--.+-+ .+ | -..-..+.|.+-++..+...++.+|+|.
T Consensus 147 Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~ 226 (544)
T PF13000_consen 147 LSPENVGYASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPH 226 (544)
T ss_pred cChhhcchHHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccc
Confidence 456777888777777777777776655433321 10 1 1112233355555555555555666654
Q ss_pred CCCCCChH-----H--HHHHHhcCcccc--cCCCCc-------chHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHH
Q 022127 76 NSPFVSKS-----E--LRLIQAGKSDSV--KKRNPP-------SLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFN 139 (302)
Q Consensus 76 ~~~~~~~~-----~--~~~~~~~~~~~~--~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (302)
.+...+.+ + .+....+.++++ .+++.. ...+++|-|++..+.+..+..-.++..-..-...=+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLl 306 (544)
T PF13000_consen 227 SESLPKIEPINKSDGKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLL 306 (544)
T ss_pred cccCccccccccccccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHH
Confidence 22111100 0 000000000100 011111 2335677788888888888877777666555555566
Q ss_pred HhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCch-------------hH-----------HHHHHHH-Hhhh
Q 022127 140 TVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSL-------------TL-----------VRKIMQS-IGFI 194 (302)
Q Consensus 140 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~-------------~~-----------~~~~~~~-~~~~ 194 (302)
| .|++.++.+....+. ....++.|+++.|+-+.+..+ .. .+.++.. .+=+
T Consensus 307 E-kG~~KE~LAl~~li~----~P~qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL 381 (544)
T PF13000_consen 307 E-KGLSKEDLALLVLID----FPFQIILPYYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRL 381 (544)
T ss_pred H-cCCCHHHhHHHHHHh----hhHHHHHHHHhhhhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHH
Confidence 6 799998877765443 344444444444443221100 00 0111100 0001
Q ss_pred -hhHHHHHHhhccc--c--hHHHHHHHHHHHHHhhh----hhhhhhhHHhhhc-cchhhhHHHHHHHHHHHHHHHHHHHh
Q 022127 195 -GPGVSLLCLNYAK--S--PAVAAVLITIALSLSSF----SQAGYLLNIQEIA-PDCAGFLHGIANSAGTLAAIISTIGT 264 (302)
Q Consensus 195 -~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-p~~~~~~~g~~~~~~~~g~~i~~~i~ 264 (302)
...+........+ . +...............+ .+....+.-+.+. |..-|+.+-+.|+..|+|+.--..+.
T Consensus 382 ~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~v 461 (544)
T PF13000_consen 382 VAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFV 461 (544)
T ss_pred HHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHH
Confidence 1111111111111 1 11122222222222232 2233333335554 58899999999999999988766666
Q ss_pred hhhhcc
Q 022127 265 GYFVQW 270 (302)
Q Consensus 265 g~l~~~ 270 (302)
=++.|.
T Consensus 462 L~lVD~ 467 (544)
T PF13000_consen 462 LWLVDY 467 (544)
T ss_pred HHHhhh
Confidence 566553
No 263
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.46 E-value=0.012 Score=49.19 Aligned_cols=161 Identities=10% Similarity=-0.024 Sum_probs=96.7
Q ss_pred HHhhhhHHHHHh-hccchhhhhHHhhHH-HHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhccc
Q 022127 130 LLSWMPIYFNTV-FNVNLKQAAWFSAVP-WGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK 207 (302)
Q Consensus 130 ~~~~~~~~~~~~-~g~s~~~~~~~~~~~-~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (302)
...++..|+.+. .|++.++..--.-+. .=.....-+....+.|.++.| .++++..+...+...++.+.+
T Consensus 22 sEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Yk---------pviil~~~~~i~t~~lll~~~ 92 (412)
T PF01770_consen 22 SEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYK---------PVIILQALSYIITWLLLLFGT 92 (412)
T ss_pred CCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhh---------HHHHHHHHHHHHHHHHHHHHC
Confidence 347777888776 788887765332222 223344456677889999754 333455554445555555556
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhhhHHhh-hccchhhhHHHHHHHHHHHHHHHHHHHhhhhhcc-ccchhHHHHHHHHHH
Q 022127 208 SPAVAAVLITIALSLSSFSQAGYLLNIQE-IAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQW-LGSFQAFLTVTAGLY 285 (302)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~-~g~~~~~~~~~~~~~ 285 (302)
+....-+.-+..+... ..-...++++-. +.|++--++.+......-+|..++..++-.+.+. ..++....++.....
T Consensus 93 sv~~mq~~q~~yg~~~-a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~ 171 (412)
T PF01770_consen 93 SVLAMQLMQFFYGLAT-AAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASV 171 (412)
T ss_pred cHHHHHHHHHHHHHHH-HHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 5544444333333322 223344455533 4447767778877777777777777777766652 235777878877777
Q ss_pred HHHHHHHHhhccCcc
Q 022127 286 FVTTIFWNLYSTGER 300 (302)
Q Consensus 286 ~~~~~~~~~~~~~~~ 300 (302)
.++.+..+++++.+|
T Consensus 172 ~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 172 SLALLIALFLPMPKR 186 (412)
T ss_pred HHHHHHHHHcCCCCc
Confidence 777777777766543
No 264
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.41 E-value=0.0015 Score=41.19 Aligned_cols=77 Identities=16% Similarity=0.214 Sum_probs=58.3
Q ss_pred hHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHh
Q 022127 124 NWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCL 203 (302)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (302)
..+.+.+...+|...+| .++|..+.+++.+...++..+|.+...++.++.+++ .+...+.+...+....+
T Consensus 5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~---------~~~~~~l~~~~~~~~~m 74 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR---------RLLRAGLLLTVLSTAAM 74 (85)
T ss_pred hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH---------HHHHHHHHHHHHHHHHH
Confidence 34566777888887777 899999999999999999999999999888775432 22236666666677666
Q ss_pred hcccchH
Q 022127 204 NYAKSPA 210 (302)
Q Consensus 204 ~~~~~~~ 210 (302)
...++.+
T Consensus 75 a~~~~~~ 81 (85)
T PF06779_consen 75 ALTHSFW 81 (85)
T ss_pred HHHhchH
Confidence 6665543
No 265
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.39 E-value=0.055 Score=45.95 Aligned_cols=178 Identities=13% Similarity=0.210 Sum_probs=106.7
Q ss_pred cHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHH
Q 022127 112 PSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSI 191 (302)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 191 (302)
..+.+....++..+..-...+-.|.++.+.+.-+..-.+.....-.+..++.++..|...||..|.+.... -...--.
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~--~l~~Qn~ 80 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRT--SLVVQNL 80 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHH--HHHHHHH
Confidence 34667888888888888888999999999776666666666667777888888889999999987764311 1111112
Q ss_pred hhhhhHHHHHHhhc-cc----chHHHHHHHHHHHHH---hhhhhhhhhhHH-hh----hc---cchhhhHHHHHHHHHHH
Q 022127 192 GFIGPGVSLLCLNY-AK----SPAVAAVLITIALSL---SSFSQAGYLLNI-QE----IA---PDCAGFLHGIANSAGTL 255 (302)
Q Consensus 192 ~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~----~~---p~~~~~~~g~~~~~~~~ 255 (302)
+...++..+..+.. .. +.+....++.+.... .-.........+ .| +. |+.....++.+.-+-.+
T Consensus 81 sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ 160 (432)
T PF06963_consen 81 SVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLF 160 (432)
T ss_pred HHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHH
Confidence 22232222222222 11 122222222221111 111111111111 11 22 34456667777777778
Q ss_pred HHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHH
Q 022127 256 AAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFW 292 (302)
Q Consensus 256 g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 292 (302)
...++|.+.|.+.+..+ ......+.++..+++..+=
T Consensus 161 ckllaPl~vG~l~t~~s-~~~~~~~i~~~N~~S~~vE 196 (432)
T PF06963_consen 161 CKLLAPLFVGLLMTFAS-PVIAAIFIAGWNLASVFVE 196 (432)
T ss_pred HHHHHHHHHHHHhhccC-HHHHHHHHHHHHHHHHHHH
Confidence 99999999999998765 7777777777777777653
No 266
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.39 E-value=0.039 Score=44.21 Aligned_cols=147 Identities=18% Similarity=0.162 Sum_probs=89.0
Q ss_pred HHHhhhhHHHHHhhccch--hhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcc
Q 022127 129 VLLSWMPIYFNTVFNVNL--KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA 206 (302)
Q Consensus 129 ~~~~~~~~~~~~~~g~s~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (302)
......+.+..+ .+.+. ...+...+...+...++.+..|.+.||.|+|+. .. .+......+.......
T Consensus 20 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~-------~~--~~~~~~~~~~~~~~~~ 89 (338)
T COG0477 20 LLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKV-------LI--IGLLLFLLGTLLLALA 89 (338)
T ss_pred hHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHH-------HH--HHHHHHHHHHHHHHhC
Confidence 344455555555 44444 467888888888888988999999999977621 11 2221112222222222
Q ss_pred cc--hHHHHHHHHHHHHHhhhhhhhhhhHHhhhccc--hhhhHHHHHHH-HHHHHHHHHHHHhhhhhcc-ccchhHHHHH
Q 022127 207 KS--PAVAAVLITIALSLSSFSQAGYLLNIQEIAPD--CAGFLHGIANS-AGTLAAIISTIGTGYFVQW-LGSFQAFLTV 280 (302)
Q Consensus 207 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~g~~~~-~~~~g~~i~~~i~g~l~~~-~g~~~~~~~~ 280 (302)
.+ ...........+...+...+.......+..|+ +++...+.... ...++..++|.+.+.+.+. ...|+..+..
T Consensus 90 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (338)
T COG0477 90 PNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLL 169 (338)
T ss_pred ccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 22 33333333334445555667777888888885 78888888888 5777888888777776654 1236665544
Q ss_pred HHHHH
Q 022127 281 TAGLY 285 (302)
Q Consensus 281 ~~~~~ 285 (302)
.....
T Consensus 170 ~~~~~ 174 (338)
T COG0477 170 AALLG 174 (338)
T ss_pred HHHHH
Confidence 44433
No 267
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.19 E-value=0.00087 Score=56.06 Aligned_cols=64 Identities=20% Similarity=0.213 Sum_probs=52.6
Q ss_pred chhhhhhhcccCcc---chhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHH
Q 022127 2 PAMSTLTSRWFPSH---ERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLST 65 (302)
Q Consensus 2 p~~~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~ 65 (302)
|...++.+|.++++ +|.+.+.++..+.++|..++..+.+++.++.||.+.|.+.++..++..+.
T Consensus 52 ~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~ 118 (372)
T PF00854_consen 52 PNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIV 118 (372)
T ss_dssp HHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHH
Confidence 45677888888865 47788899999999999999999999999999999999977766654443
No 268
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.10 E-value=0.0061 Score=49.60 Aligned_cols=88 Identities=11% Similarity=0.065 Sum_probs=66.4
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhccc---------------
Q 022127 208 SPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWL--------------- 271 (302)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~--------------- 271 (302)
+....++...+.+.+.+...+..+.++.+..| |++++..++...+..+|..++|.+.+.+....
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEA 88 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHH
Confidence 44555666667777788888888999998877 78999999999999999999999999887321
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhh
Q 022127 272 GSFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 272 g~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
.+|+.++++.+.+.++..+++...
T Consensus 89 ~~~~~~yl~ia~~~~~~~i~~~~~ 112 (310)
T TIGR01272 89 AKVHTPYLLLAGALAVLAIIFAFL 112 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 247778886666655555444443
No 269
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.95 E-value=0.08 Score=38.04 Aligned_cols=108 Identities=12% Similarity=0.050 Sum_probs=70.9
Q ss_pred HhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhh
Q 022127 152 FSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYL 231 (302)
Q Consensus 152 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (302)
-.++......++.++.+.+.+++|.| +.+.++.+...+-.... +.++.+..+..-.+.+++.+..+...-
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K---------~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg 111 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPK---------WSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQG 111 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhH---------HHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhh
Confidence 34556667777888888899999865 23234444443333332 234455555555566666666676666
Q ss_pred hHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhc
Q 022127 232 LNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ 269 (302)
Q Consensus 232 ~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~ 269 (302)
.++.+..+ +.+++..|+...+.+.+..+|..+.-.+.+
T Consensus 112 ~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 112 TYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66766665 778999999998888888888776655543
No 270
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.94 E-value=0.014 Score=52.11 Aligned_cols=162 Identities=10% Similarity=0.097 Sum_probs=107.9
Q ss_pred HHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcc--
Q 022127 129 VLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA-- 206 (302)
Q Consensus 129 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 206 (302)
+.....-.-++++++++..+.|++.+..-++..+......+...|.-|.++. ..+.++.+++.++....
T Consensus 114 ~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~I---------g~G~~~m~lgsll~alPHf 184 (735)
T KOG3626|consen 114 GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWI---------GIGLVLMGLGSLLFALPHF 184 (735)
T ss_pred hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCcccee---------eechhHHHHHHHHHhChHH
Confidence 5544445556778999999999999999999988888888887777655432 23444444333332211
Q ss_pred ------------------c----------------------------chHHHHHHHHHHHHHhhhhhhhhh----hHHhh
Q 022127 207 ------------------K----------------------------SPAVAAVLITIALSLSSFSQAGYL----LNIQE 236 (302)
Q Consensus 207 ------------------~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 236 (302)
+ +....+..++++.+..|..-.+.+ +++-|
T Consensus 185 ~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDD 264 (735)
T KOG3626|consen 185 FSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDD 264 (735)
T ss_pred hcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccc
Confidence 0 001133445555555555444443 44555
Q ss_pred hcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhcc------------------ccchhHHHHHHHHHHHHHHHHHHhhcc
Q 022127 237 IAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQW------------------LGSFQAFLTVTAGLYFVTTIFWNLYST 297 (302)
Q Consensus 237 ~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~------------------~g~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (302)
... ++.+...|+..++..+|-++|=.+++.+... .|.|+..|++++.+.++..+.++.+.+
T Consensus 265 nvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk 344 (735)
T KOG3626|consen 265 NVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPK 344 (735)
T ss_pred cccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 555 6678889999988888888888888776531 256888999999999999988888876
Q ss_pred Cc
Q 022127 298 GE 299 (302)
Q Consensus 298 ~~ 299 (302)
+.
T Consensus 345 ~l 346 (735)
T KOG3626|consen 345 EL 346 (735)
T ss_pred cC
Confidence 53
No 271
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.65 E-value=0.0029 Score=53.96 Aligned_cols=67 Identities=25% Similarity=0.347 Sum_probs=57.2
Q ss_pred CchhhhhhhcccCccchhhHHHHHhh-hhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHH
Q 022127 1 MPAMSTLTSRWFPSHERASAIGICMG-GFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 67 (302)
Q Consensus 1 ~p~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 67 (302)
|.+..+|+++..||+.|+.+.++... ..++|--+|.++||.+.+.+|=|..|.+.++.+++.+++..
T Consensus 477 Waa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 477 WAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred HHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence 34677899999999999999998876 56899999999999999999999999998888877655433
No 272
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.37 E-value=0.42 Score=40.99 Aligned_cols=56 Identities=5% Similarity=-0.081 Sum_probs=34.8
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhhhHHhhhc-cchhhhHHHHHHHHHHHHHHHHHHH
Q 022127 208 SPAVAAVLITIALSLSSFSQAGYLLNIQEIA-PDCAGFLHGIANSAGTLAAIISTIG 263 (302)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~g~~~~~~~~g~~i~~~i 263 (302)
+.+...+...+.+...|...+.......+.. +++|-.+..+....-.+|-.+|..+
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455555666666665555555554444 4777777777777777777777665
No 273
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.32 E-value=0.00058 Score=59.66 Aligned_cols=165 Identities=11% Similarity=0.064 Sum_probs=1.6
Q ss_pred HHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhh
Q 022127 125 WGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLN 204 (302)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (302)
....++..-.-+-++++++++..+.|++.+..-++..+..++..+..+|..|.++ + ..+.++.+++.+++.
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprw--------i-g~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRW--------I-GIGALLMGLGSLLFA 86 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcce--------e-eecHHHHHHHHHHHh
Confidence 4444444334445667799999999999999999999999888888877543322 1 345555554444332
Q ss_pred ccc----------------------------------------------chHHHHHHHHHHHHHhhhhhhhhh----hHH
Q 022127 205 YAK----------------------------------------------SPAVAAVLITIALSLSSFSQAGYL----LNI 234 (302)
Q Consensus 205 ~~~----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 234 (302)
..+ +.......+.++....|....+.+ +++
T Consensus 87 lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYi 166 (539)
T PF03137_consen 87 LPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYI 166 (539)
T ss_dssp -----------------------------------------------------------------SSS------------
T ss_pred ccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeee
Confidence 210 001123444555555555544444 445
Q ss_pred hhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhhcc---------------------ccchhHHHHHHHHHHHHHHHHH
Q 022127 235 QEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQW---------------------LGSFQAFLTVTAGLYFVTTIFW 292 (302)
Q Consensus 235 ~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~---------------------~g~~~~~~~~~~~~~~~~~~~~ 292 (302)
-|..+ ++.+...|+......+|-++|=.+++...+. .|.|...|++.+.+.++..+.+
T Consensus 167 DDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl 246 (539)
T PF03137_consen 167 DDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPL 246 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55554 6677888888888888877777777766531 2457778888888888887777
Q ss_pred HhhccC
Q 022127 293 NLYSTG 298 (302)
Q Consensus 293 ~~~~~~ 298 (302)
+.++|+
T Consensus 247 ~~FPk~ 252 (539)
T PF03137_consen 247 FFFPKK 252 (539)
T ss_dssp ------
T ss_pred HcCCcc
Confidence 776653
No 274
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.26 E-value=0.092 Score=44.01 Aligned_cols=84 Identities=8% Similarity=-0.090 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHhhhcc-c---hhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHH
Q 022127 211 VAAVLITIALSLSSFSQAGYLLNIQEIAP-D---CAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYF 286 (302)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~---~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~ 286 (302)
...+.+.+...+.|..-+...+...|.++ + ++.+.........++|+.+++.+.+++.++.| |...|.+.++..+
T Consensus 35 ~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~-~~~~f~i~~~~~~ 113 (372)
T PF00854_consen 35 LFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYG-WFLGFGIPAIGML 113 (372)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccc-hhhhhhHHHHHHH
Confidence 44555555666777778888888888665 3 36678888899999999999999999998887 9999999999999
Q ss_pred HHHHHHHhh
Q 022127 287 VTTIFWNLY 295 (302)
Q Consensus 287 ~~~~~~~~~ 295 (302)
++.+.++.-
T Consensus 114 ~~~~~f~~~ 122 (372)
T PF00854_consen 114 LALIVFLSG 122 (372)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHHhC
Confidence 888766543
No 275
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=96.19 E-value=0.056 Score=44.97 Aligned_cols=134 Identities=7% Similarity=-0.109 Sum_probs=60.3
Q ss_pred hhhhHHHHHhhccc---hhhhhHHhhH-HHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhccc
Q 022127 132 SWMPIYFNTVFNVN---LKQAAWFSAV-PWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK 207 (302)
Q Consensus 132 ~~~~~~~~~~~g~s---~~~~~~~~~~-~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (302)
...|-+..+..+-. ....-..... .++...+|.+...++-++-. |........|.+.+-.+..+-.-- .-....
T Consensus 264 siFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~-r~l~i~v~lR~lfiPlF~~cn~~~-~~v~~~ 341 (406)
T KOG1479|consen 264 SIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPDP-RKLTIPVLLRLLFIPLFLLCNYPP-LPVVFE 341 (406)
T ss_pred EecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCCC-ceehHHHHHHHHHHHHHHHhccCC-CCceec
Confidence 35666665543221 2222333334 67778888777666654442 222211111111111111000000 001123
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhhhh
Q 022127 208 SPAVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYF 267 (302)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l 267 (302)
+.+..+....+.+...|...+....+..+..|.+...+.|....+.-.++.....+.+++
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~l 401 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSWV 401 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 445555666666666666666666666665653344444554444444444444444443
No 276
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.19 E-value=0.0012 Score=51.64 Aligned_cols=153 Identities=11% Similarity=-0.030 Sum_probs=85.2
Q ss_pred cHHHHHHHHHhhhHHHHHHH--hhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHH
Q 022127 112 PSWTVIIANITNNWGYFVLL--SWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQ 189 (302)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 189 (302)
++..+.+..++....++... .-+..+++...+.+..+..++++.+...+++-.+++|++.||...-+. ..
T Consensus 42 r~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~--------gt 113 (459)
T KOG4686|consen 42 RFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRL--------GT 113 (459)
T ss_pred HHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhH--------HH
Confidence 44444544444444443332 223344444455666677888899999999999999999998633211 11
Q ss_pred HHhhhhhHHHHHHhh---cccchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhh
Q 022127 190 SIGFIGPGVSLLCLN---YAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTG 265 (302)
Q Consensus 190 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g 265 (302)
.+-+....++-+.+. ..+..|.....-.+.+.+.-.....-+.+....+. |+.+.++|+......+|+.+--.+.+
T Consensus 114 ii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~ 193 (459)
T KOG4686|consen 114 IILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMP 193 (459)
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecH
Confidence 111111122221111 12333433333333222222111222333344455 88999999999999999998888888
Q ss_pred hhhcccc
Q 022127 266 YFVQWLG 272 (302)
Q Consensus 266 ~l~~~~g 272 (302)
++.|..+
T Consensus 194 ~ly~~~~ 200 (459)
T KOG4686|consen 194 FLYDTMG 200 (459)
T ss_pred HHHHHHH
Confidence 8887644
No 277
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=95.86 E-value=0.67 Score=36.56 Aligned_cols=179 Identities=9% Similarity=0.042 Sum_probs=91.7
Q ss_pred hHHhhcCccHHHHHHHHHhhhHHHHHHH-hhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchh
Q 022127 104 LRHLLSKLPSWTVIIANITNNWGYFVLL-SWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLT 182 (302)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 182 (302)
.+.+..|+++.++-....+.....+.+. .|.|..--+..+ .--|.+.+.+.+.+++|+-+..++..|-..|--.
T Consensus 241 a~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~---iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~-- 315 (454)
T KOG4332|consen 241 ARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE---IPHGFIFATFMLASMLGSSLASRLLSRSSPKVES-- 315 (454)
T ss_pred HHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCccc---CCchhHHHHHHHHHHHhhHHHHHHHhcCCcccch--
Confidence 4456667777666655555555555543 555543212112 2347778888888888887776666554433211
Q ss_pred HHHHHHHHHhhhhhHHHHHHhhcc---cchHHHHHHHHHHHHHhhhhhhhhhhHHhhhcc-chhhhHHHHHHHHHHHHHH
Q 022127 183 LVRKIMQSIGFIGPGVSLLCLNYA---KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAI 258 (302)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~ 258 (302)
...+...+......+.+...... .++....+.+++.-.+.|..+|...-+-.+..| +.|++.+-....--++-.-
T Consensus 316 -ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnifvC 394 (454)
T KOG4332|consen 316 -YMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVC 394 (454)
T ss_pred -HHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhh
Confidence 11111111111111111111111 234445666777777888888888887788888 6677765554333333222
Q ss_pred HHHHHhhhhhcc--ccchhHHHHHHHHHHHHHHHH
Q 022127 259 ISTIGTGYFVQW--LGSFQAFLTVTAGLYFVTTIF 291 (302)
Q Consensus 259 i~~~i~g~l~~~--~g~~~~~~~~~~~~~~~~~~~ 291 (302)
++-... =.|. ++ -+..|-++.....++.+.
T Consensus 395 lvLynl--h~~~~p~~-tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 395 LVLYNL--HVDAFPTT-TRNMFGICSAFLFVASIL 426 (454)
T ss_pred hhheec--ccccCccc-cchhhhhhHHHHHHHHHH
Confidence 211110 0111 12 346677777766666544
No 278
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=95.65 E-value=0.097 Score=41.78 Aligned_cols=63 Identities=14% Similarity=0.095 Sum_probs=41.2
Q ss_pred hhcccchHHHHHHHHHHHHHhhhhhhhhh-hHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhh
Q 022127 203 LNYAKSPAVAAVLITIALSLSSFSQAGYL-LNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTG 265 (302)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g 265 (302)
..+.++.+...++...-+...|..+...+ .+..|..|++|-.+++.....-.+|-.++..+.=
T Consensus 336 ~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lal 399 (409)
T KOG3880|consen 336 YWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLAL 399 (409)
T ss_pred HHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhc
Confidence 34556666555555555555555555554 4445688899999999888777777776665543
No 279
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=94.85 E-value=0.92 Score=40.33 Aligned_cols=171 Identities=12% Similarity=0.026 Sum_probs=103.0
Q ss_pred HHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhh
Q 022127 115 TVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFI 194 (302)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 194 (302)
.....-.+...++++....+..|+.+.++.+...+.-.............+.+++++|-+--|. ..+.++.+
T Consensus 41 ~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry--------~tI~~~s~ 112 (571)
T KOG1237|consen 41 FILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRY--------FTINIGSL 112 (571)
T ss_pred HHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHH--------HHHHHHHH
Confidence 3444444556666666777888888889988877777777777777777788999999875432 22223333
Q ss_pred hhHHHHHHhhcc--------------------c--chHH---HHHHHHHHHHHhhhhhhhhhhHHhhhcc-----c--hh
Q 022127 195 GPGVSLLCLNYA--------------------K--SPAV---AAVLITIALSLSSFSQAGYLLNIQEIAP-----D--CA 242 (302)
Q Consensus 195 ~~~~~~~~~~~~--------------------~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p-----~--~~ 242 (302)
+..+++..+... . +... ....+.+...+.+..-+.....-.|-++ + ..
T Consensus 113 i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~ 192 (571)
T KOG1237|consen 113 ISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGI 192 (571)
T ss_pred HHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCc
Confidence 333222221110 0 1111 1111111112233333444444444333 1 23
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHh
Q 022127 243 GFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNL 294 (302)
Q Consensus 243 ~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 294 (302)
..-+.......+.|..++..+.-+.-|..+ |...|.+..+...++.++++.
T Consensus 193 ~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~-w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 193 PSFFNWFYFSQNGGALLAQTVLVYIQDNVG-WKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhhccc-ceeeccHHHHHHHHHHHHHHc
Confidence 466777888888999999999888877765 999999998888888777654
No 280
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=94.66 E-value=2.3 Score=35.75 Aligned_cols=179 Identities=9% Similarity=0.030 Sum_probs=74.2
Q ss_pred HHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHh
Q 022127 113 SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIG 192 (302)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 192 (302)
++...+.........+.+.+-.+.|.++..+.++ +........+.+.+...+.-.+--|...|... +.+-.+....
T Consensus 20 ~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~--~~~~~l~~~~ 95 (406)
T KOG1479|consen 20 YLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRT--RVGYLLSLIA 95 (406)
T ss_pred HHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 4444555555555666666666666555333333 33333344444444444444443333333100 0111111111
Q ss_pred hhhhHHHHHHhhccc-----chHHHHHHHHHHHHHhhhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhhhh
Q 022127 193 FIGPGVSLLCLNYAK-----SPAVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYF 267 (302)
Q Consensus 193 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l 267 (302)
.+......+...... ..........+..++.+...+..+....+.++|+....++=.+..+.+.+...-..-...
T Consensus 96 il~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~ytqavm~G~a~aG~l~Sl~~i~tka~~ 175 (406)
T KOG1479|consen 96 ILFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLFPSEYTQAVMSGQALAGTLTSLLRILTKAAF 175 (406)
T ss_pred HHHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcCCHHHHHHHHhcchhHhHHHHHHHHHHHHhc
Confidence 111111111111111 122233334444455556666667777777777655444333333333322222222222
Q ss_pred hccccchhHHHHHHHHHHHHHHHHHHhh
Q 022127 268 VQWLGSFQAFLTVTAGLYFVTTIFWNLY 295 (302)
Q Consensus 268 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (302)
.|...+-..-|.+..+..+++.+++..+
T Consensus 176 ~~~~~sA~~yF~~s~~~~llC~i~y~~l 203 (406)
T KOG1479|consen 176 SDSRTSALIYFITSTVILLLCFVLYLVL 203 (406)
T ss_pred CCCCceeehhHHHHHHHHHHHHHHHHHh
Confidence 2222223334455555555666555533
No 281
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=93.90 E-value=2.8 Score=35.41 Aligned_cols=126 Identities=13% Similarity=-0.011 Sum_probs=71.0
Q ss_pred HhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhhhhh
Q 022127 152 FSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYL 231 (302)
Q Consensus 152 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (302)
....-.+...+..+.+.+..+|+.-+ .|.. ....+...+++...+.++.+.-++...+.....+..-....
T Consensus 64 Vlladi~P~l~~Kl~aP~fi~~v~y~-------~Ri~--~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL 134 (402)
T PF02487_consen 64 VLLADILPSLLVKLIAPFFIHRVPYW-------IRIL--ICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFL 134 (402)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhccch-------HHHH--HHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHH
Confidence 44445566777778888888887543 2333 34445556666666667766666666666555555444444
Q ss_pred hHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc-chhHHHHHHHHHHHHHHHH
Q 022127 232 LNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG-SFQAFLTVTAGLYFVTTIF 291 (302)
Q Consensus 232 ~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g-~~~~~~~~~~~~~~~~~~~ 291 (302)
.+.. .+++ ...+-.......++.+|+...-.+.+ .| +.+..+.+...+.++-.+.
T Consensus 135 ~lt~-~y~~---~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~ 190 (402)
T PF02487_consen 135 SLTH-FYGK---SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLS 190 (402)
T ss_pred HHHH-hcCc---cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHH
Confidence 4433 4443 22344444445566667666655554 33 3566676666555444433
No 282
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=93.73 E-value=0.99 Score=35.32 Aligned_cols=26 Identities=12% Similarity=-0.266 Sum_probs=15.6
Q ss_pred HHHHHhhhHHHHHHHhhhhHHHHHhh
Q 022127 117 IIANITNNWGYFVLLSWMPIYFNTVF 142 (302)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (302)
.+.........++.+..=..|.+++-
T Consensus 184 G~~LAv~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 184 GIILAVFAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred hHHHHHHHHHHHhcccchHHHHHhCc
Confidence 33344445566677666667777753
No 283
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.51 E-value=0.023 Score=46.20 Aligned_cols=55 Identities=7% Similarity=0.048 Sum_probs=2.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHhhhc-cchhhhHHHHHHHHHHHHHHHHHHHh
Q 022127 210 AVAAVLITIALSLSSFSQAGYLLNIQEIA-PDCAGFLHGIANSAGTLAAIISTIGT 264 (302)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~g~~~~~~~~g~~i~~~i~ 264 (302)
+...+...+.++..|...+.......+.. |++|..+-.+....-.+|-.+|..+.
T Consensus 249 ~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 249 AWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp ------------------HHHH----------------------------------
T ss_pred HHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455555556655555554444433 46676666666666666666665543
No 284
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=92.90 E-value=2.6 Score=35.24 Aligned_cols=65 Identities=11% Similarity=0.078 Sum_probs=41.6
Q ss_pred ccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccc-----hhhccCC
Q 022127 111 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASD-----SLIKAGY 179 (302)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~~~~~~ 179 (302)
+++..+.+.+..+........ .+|..++. .|.|-.+.+.......= .--.+++..++| |+||||.
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~P--~sLKllWaPiVDs~y~k~~Grrks 100 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYWP--FSLKLLWAPIVDSVYSKRFGRRKS 100 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhhH--HHHHHHHHhhhHHHHHHhhccccc
Confidence 466777777877777665555 88888885 67776665554332211 112356777778 9999874
No 285
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=92.88 E-value=0.33 Score=38.21 Aligned_cols=43 Identities=12% Similarity=0.217 Sum_probs=34.4
Q ss_pred HHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCC
Q 022127 137 YFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGY 179 (302)
Q Consensus 137 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 179 (302)
|+.+.+|+...+.|.+........++...+.|-++||.|||+-
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKra 104 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRA 104 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccc
Confidence 4455589999999988877666777777888999999999863
No 286
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=92.09 E-value=0.49 Score=37.05 Aligned_cols=66 Identities=20% Similarity=0.166 Sum_probs=42.5
Q ss_pred hhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCC
Q 022127 8 TSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPC 75 (302)
Q Consensus 8 i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~ 75 (302)
..+.|| ++||++.|+.-...+++..+-..+...+.+.-.-+. +...+....+..+....+++..|+
T Consensus 121 ~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~f-ll~la~~~~~v~l~~~~~vr~~~~ 186 (250)
T PF06813_consen 121 CVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSF-LLFLAVLPAVVCLVAMFFVRPVPP 186 (250)
T ss_pred HHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHH-HHHHHHHHHHHHHHHhhheeccCC
Confidence 346777 579999999999999999887777666655422333 344455454444444444555443
No 287
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=91.04 E-value=11 Score=33.74 Aligned_cols=64 Identities=13% Similarity=0.078 Sum_probs=48.5
Q ss_pred chhhhhhhcccC---c-cc--hhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHH
Q 022127 2 PAMSTLTSRWFP---S-HE--RASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLST 65 (302)
Q Consensus 2 p~~~~~i~~~~~---~-~~--r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~ 65 (302)
|...++-+|-++ + ++ +...+.++....+.|..++..+..++-++.||.+.|.+..+...+..++
T Consensus 171 ~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~i 240 (571)
T KOG1237|consen 171 PCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILI 240 (571)
T ss_pred CcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHH
Confidence 344455566676 2 22 3467899999999999999999999988999999999987766664443
No 288
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=89.70 E-value=3.3 Score=36.58 Aligned_cols=35 Identities=11% Similarity=0.088 Sum_probs=15.9
Q ss_pred chhhhhHHhhHHHHHHHhhhhhhhc----ccchhhccCC
Q 022127 145 NLKQAAWFSAVPWGTMAVSGYMAGK----ASDSLIKAGY 179 (302)
Q Consensus 145 s~~~~~~~~~~~~~~~~~~~~~~g~----l~dr~~~~~~ 179 (302)
++..-|.+....-+..++++.++|+ +-..++.+++
T Consensus 291 ~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~~g~~W 329 (521)
T PF02990_consen 291 SPNNRGSLLTAAIILYALTSFIAGYVSARLYKSFGGKKW 329 (521)
T ss_pred cccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHcCCCce
Confidence 4443444444444444444444444 4444555443
No 289
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=88.58 E-value=14 Score=31.12 Aligned_cols=170 Identities=14% Similarity=0.179 Sum_probs=85.5
Q ss_pred ccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHH
Q 022127 111 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS 190 (302)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 190 (302)
+....+...++...+.--...+-...|+.+..|-|..-.+.....-+....+...+.|...|+..|+|.. +..+..
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi----~~~L~l 102 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVI----QTWLLL 102 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHH----HHHHhh
Confidence 3344556667777766666666677777775554544444444444555556666777788999887654 222222
Q ss_pred --HhhhhhHHHHHHhhccc-----chHHHHHHHHHHHHHhhhhhhhhhhHH------hh----hcc-chhhh---HHHHH
Q 022127 191 --IGFIGPGVSLLCLNYAK-----SPAVAAVLITIALSLSSFSQAGYLLNI------QE----IAP-DCAGF---LHGIA 249 (302)
Q Consensus 191 --~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~----~~p-~~~~~---~~g~~ 249 (302)
.+.+.++...+.+...+ +......+..+....... ....+.+ .| +.. +.++. ..+..
T Consensus 103 qNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI--~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnati 180 (503)
T KOG2601|consen 103 QNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAI--AVLASLAGTILIERDWVVVMSEGESPSVLTNMNATI 180 (503)
T ss_pred ccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHH--HHHHHhhheEEecccEEEEecCCCCHHHHhhcchhh
Confidence 23333333222222222 222223333332221111 1111111 11 111 22333 33555
Q ss_pred HHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHH
Q 022127 250 NSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFV 287 (302)
Q Consensus 250 ~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~ 287 (302)
...-.....+.|.+.|.+.+..+ .+..-..+++-..+
T Consensus 181 r~iDq~tn~Lapv~tg~Iitfvs-l~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 181 RGIDQSTNLLAPVITGLIITFVS-LRASAGTFAAWALV 217 (503)
T ss_pred hhhhhhhhchhhhhhcccceeec-hhhhhhhhHHHHHH
Confidence 55666778899999999987654 55544444443333
No 290
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=88.50 E-value=15 Score=31.66 Aligned_cols=27 Identities=11% Similarity=-0.068 Sum_probs=14.6
Q ss_pred HHHHHHHHhhhhhhhhhhHHhhhccch
Q 022127 215 LITIALSLSSFSQAGYLLNIQEIAPDC 241 (302)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~p~~ 241 (302)
...+.+...+...+..........|++
T Consensus 112 ~v~~~g~~~~~~q~s~~gla~~fp~~~ 138 (437)
T TIGR00939 112 SVVIINSGMALLQGSLFGLAGVFPSTY 138 (437)
T ss_pred HHHHHHhhhhhhcccchhhcccCCHHH
Confidence 333444455555556666666555554
No 291
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=88.41 E-value=1 Score=35.78 Aligned_cols=60 Identities=40% Similarity=0.661 Sum_probs=46.6
Q ss_pred chhhhhhhcccCc-cchhhHHHHHhh-hhhhHHHHHHHHHHHHHhh--cCCchHHHHHHHHHHH
Q 022127 2 PAMSTLTSRWFPS-HERASAIGICMG-GFHLGNVVGLLLTPIMLST--IGISGPFILFSSLGLL 61 (302)
Q Consensus 2 p~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~~~--~gwr~~f~~~~~~~~~ 61 (302)
|...+++.|+.|+ ++|+...+.... ...+|..+++.+++.+... .+||..|.........
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 113 PVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLL 176 (338)
T ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 5667889999988 678999999888 5888999999877777654 6899977765555543
No 292
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.47 E-value=13 Score=32.23 Aligned_cols=110 Identities=14% Similarity=-0.003 Sum_probs=74.7
Q ss_pred hhHH-hhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhh
Q 022127 149 AAWF-SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQ 227 (302)
Q Consensus 149 ~~~~-~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (302)
+|+. .++......+..++.+.+.|+++.| +.+.++..........+.+ .|.+.....-.+.+++.++.+
T Consensus 51 aGy~~~aiiY~~ftv~~l~~psiv~~i~~K---------~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw 120 (461)
T KOG3098|consen 51 AGYYGQAIIYAFFTVSCLFAPSIVNFLGPK---------WALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLW 120 (461)
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHhhHH---------HHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHhee
Confidence 4444 5677788888899999999999854 4444555444443333333 345555666666666677767
Q ss_pred hhhhhHHhhhcc-chhhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 022127 228 AGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFV 268 (302)
Q Consensus 228 ~~~~~~~~~~~p-~~~~~~~g~~~~~~~~g~~i~~~i~g~l~ 268 (302)
...-.++.+..+ +...+..++...+...+..+|..+.-.+.
T Consensus 121 ~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~ 162 (461)
T KOG3098|consen 121 TGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFIYF 162 (461)
T ss_pred cccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhheeee
Confidence 777677777665 77888889988888888888876655443
No 293
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=77.63 E-value=17 Score=24.07 Aligned_cols=32 Identities=16% Similarity=0.390 Sum_probs=27.0
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 022127 240 DCAGFLHGIANSAGTLAAIISTIGTGYFVQWL 271 (302)
Q Consensus 240 ~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~ 271 (302)
+.++.+.++-...-.+++.+-....||+.|++
T Consensus 38 s~k~~~~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 38 SIKGYAQAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45778888888888899998899999999975
No 294
>PF12832 MFS_1_like: MFS_1 like family
Probab=75.50 E-value=16 Score=22.55 Aligned_cols=40 Identities=15% Similarity=0.143 Sum_probs=30.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHH
Q 022127 241 CAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTV 280 (302)
Q Consensus 241 ~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~ 280 (302)
....-.|+......+...+++++.|.+.|..+..+.....
T Consensus 32 l~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~ 71 (77)
T PF12832_consen 32 LSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLG 71 (77)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHH
Confidence 3455667777778888899999999999998855554443
No 295
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=72.46 E-value=69 Score=28.31 Aligned_cols=67 Identities=10% Similarity=-0.000 Sum_probs=37.4
Q ss_pred HHHHHHHHhhhHHHHHHHhhhhHHHHH-hhccchhhhhHHhh---HHHHHHHhhhhhhhcccchhhccCCc
Q 022127 114 WTVIIANITNNWGYFVLLSWMPIYFNT-VFNVNLKQAAWFSA---VPWGTMAVSGYMAGKASDSLIKAGYS 180 (302)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~~~~~~~ 180 (302)
.++.+.++++.........-.|..+++ ..+.|-.+.+.... ++.+=-.=+.++=...++|+||||.-
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSW 73 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSW 73 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchh
Confidence 456667777776665555677888877 23455555554322 22222222333444556688998743
No 296
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=65.90 E-value=29 Score=27.65 Aligned_cols=67 Identities=3% Similarity=0.055 Sum_probs=49.7
Q ss_pred CCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhh
Q 022127 100 NPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYM 166 (302)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~ 166 (302)
.+.+|..-|++-.+.-..+.+.+.-...+.-+.|+|.|..+..+++...-+++-++..+.+...+.+
T Consensus 190 ~Rm~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v 256 (412)
T KOG4830|consen 190 VRMHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMV 256 (412)
T ss_pred hcccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhh
Confidence 4556777788888888888888888777788899999988877777766666666666665555444
No 297
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=62.88 E-value=58 Score=23.84 Aligned_cols=57 Identities=16% Similarity=0.129 Sum_probs=35.1
Q ss_pred cccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhc------CCchHHHHHHHHHHHHHHHH
Q 022127 10 RWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI------GISGPFILFSSLGLLWLSTW 66 (302)
Q Consensus 10 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------gwr~~f~~~~~~~~~~~~~~ 66 (302)
.++|.+++.+..+...++.-.+...--.+=+.+.... .+...+++.++++.+..++.
T Consensus 13 ~~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mv 75 (166)
T PF05255_consen 13 PWFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMV 75 (166)
T ss_pred CCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHh
Confidence 3456666667666666665555555555555444332 57788888888777755443
No 298
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=58.98 E-value=45 Score=23.93 Aligned_cols=30 Identities=13% Similarity=0.109 Sum_probs=21.2
Q ss_pred hhHH-hhhccchhhhHHHHHHHHHHHHHHHH
Q 022127 231 LLNI-QEIAPDCAGFLHGIANSAGTLAAIIS 260 (302)
Q Consensus 231 ~~~~-~~~~p~~~~~~~g~~~~~~~~g~~i~ 260 (302)
|..+ +...|+..|+..|+-..-.|++.+.-
T Consensus 116 YGilSaSWD~~r~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 116 YGILSASWDPEREGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred hhhcccccCCCCCCCcccHHHHHHhHHHHHH
Confidence 4333 44566889999999888888876543
No 299
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=58.32 E-value=30 Score=20.32 Aligned_cols=28 Identities=14% Similarity=0.265 Sum_probs=14.4
Q ss_pred CchHHHHHHHH---HHHHHHHHHhhhcCCCC
Q 022127 48 ISGPFILFSSL---GLLWLSTWTSKVTNDPC 75 (302)
Q Consensus 48 wr~~f~~~~~~---~~~~~~~~~~~~~~~p~ 75 (302)
+|..|.+...+ .++.-++.++.+|++|+
T Consensus 31 vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~~ 61 (61)
T PF04024_consen 31 VRLIFVVLTFFTGGGILLYLILWLLLPKEPE 61 (61)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHcCCCCC
Confidence 35555554443 23333445566777653
No 300
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=58.21 E-value=1.1e+02 Score=25.71 Aligned_cols=131 Identities=11% Similarity=0.046 Sum_probs=59.1
Q ss_pred hhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhh-ccCCchhHHHHHHHHHhhhhhHHHHHHhhcc--cchH
Q 022127 134 MPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLI-KAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA--KSPA 210 (302)
Q Consensus 134 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 210 (302)
+........|-+..+.+.+.+.+-....+|+...-++.|.-- .|... ....+..++-+...+..+.+... ++.+
T Consensus 30 l~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~---vElllgligg~Sa~~ly~~FA~~~~~~~~ 106 (508)
T COG4262 30 LGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVD---VELLLGLIGGVSAAALYLLFALESAPSRL 106 (508)
T ss_pred HHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHH---HHHHHHHhccchHHHHHHHHHhccchHHH
Confidence 333334435556667777766666666666666655544321 11100 01111112222222222222222 2334
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 022127 211 VAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFV 268 (302)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~ 268 (302)
.......+.+...|.=.|....+.+.-..+..-.. +.....-++|+..+.....++.
T Consensus 107 Vly~lt~vIG~LVG~EiPL~mrml~~r~a~~k~~~-s~vl~~DYLGal~~gLl~p~ll 163 (508)
T COG4262 107 VLYALTAVIGVLVGAEIPLLMRMLQRRQAKAKDLG-SRVLTLDYLGALAGGLLWPFLL 163 (508)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhhh-hhhhhhHhhhhhhHHHHHHHHH
Confidence 44444555555566666666666655222222222 2223336667666666665543
No 301
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=58.15 E-value=15 Score=24.48 Aligned_cols=31 Identities=16% Similarity=0.114 Sum_probs=23.0
Q ss_pred hhcCCchHHHHHHHHHHHHHHHHHhhhcCCC
Q 022127 44 STIGISGPFILFSSLGLLWLSTWTSKVTNDP 74 (302)
Q Consensus 44 ~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p 74 (302)
+..+|+.+|++...++++.+.+.+.+.||..
T Consensus 55 d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 55 DWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 4568999999977777777766666666654
No 302
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=56.91 E-value=15 Score=32.30 Aligned_cols=31 Identities=16% Similarity=0.156 Sum_probs=20.3
Q ss_pred cchhhhhHHhhHHHHHHHhhhhhhhcccchh
Q 022127 144 VNLKQAAWFSAVPWGTMAVSGYMAGKASDSL 174 (302)
Q Consensus 144 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 174 (302)
.++..-|.+++...+..++..+++|+.+.|+
T Consensus 356 lSPs~RGsLmT~~~~l~v~~G~~agY~s~rl 386 (628)
T KOG1278|consen 356 LSPSSRGSLMTAMVLLFVFMGFVAGYVSARL 386 (628)
T ss_pred CCccccccHHHHHHHHHHHHHHhhhhhhhhh
Confidence 4666666666666666666666777766665
No 303
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=55.84 E-value=93 Score=24.50 Aligned_cols=25 Identities=16% Similarity=0.258 Sum_probs=13.9
Q ss_pred hhHHHHHhhhhhhHHHHHHHHHHHH
Q 022127 18 ASAIGICMGGFHLGNVVGLLLTPIM 42 (302)
Q Consensus 18 ~~~~~~~~~~~~~g~~~~~~~~~~l 42 (302)
.+.....-.+.-+|.++|...+..-
T Consensus 9 ~~~~~~illg~~iGg~~G~~~~~~~ 33 (248)
T PF11368_consen 9 LRFLLLILLGGLIGGFIGFFIGRIG 33 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555555556666666666544333
No 304
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=53.13 E-value=96 Score=23.34 Aligned_cols=29 Identities=17% Similarity=-0.059 Sum_probs=15.0
Q ss_pred HHHHHHHHhhcCCchHHHHHHHHHHHHHH
Q 022127 36 LLLTPIMLSTIGISGPFILFSSLGLLWLS 64 (302)
Q Consensus 36 ~~~~~~l~~~~gwr~~f~~~~~~~~~~~~ 64 (302)
+.+++.......-.|.....|.+.+...+
T Consensus 43 Sl~~~~~l~~ip~~wiLGlLGliPI~lGi 71 (191)
T PF03596_consen 43 SLLGAFGLLFIPPEWILGLLGLIPIYLGI 71 (191)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 44444444444445554555666666554
No 305
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=52.89 E-value=48 Score=19.82 Aligned_cols=32 Identities=19% Similarity=0.104 Sum_probs=14.8
Q ss_pred CCchHHHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 022127 47 GISGPFILFSSLGLLWLSTWTSKVTNDPCNSP 78 (302)
Q Consensus 47 gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~ 78 (302)
||-.++.+...+.++..-.+-..+||+.++.+
T Consensus 29 g~Aav~~~~~~~~l~~~~~iG~~LPe~s~~aP 60 (67)
T PF11511_consen 29 GYAAVFFLGLWFLLVALYFIGLLLPERSRQAP 60 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSTTTCSS-S
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCchhcccCC
Confidence 34444444333333333344456787765543
No 306
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=52.87 E-value=19 Score=23.83 Aligned_cols=33 Identities=15% Similarity=0.090 Sum_probs=27.3
Q ss_pred hhhhHHhhHHHHHHHhhhhhhhcccchhhccCC
Q 022127 147 KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGY 179 (302)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 179 (302)
...|-.+..++-..++.+++.++..|+....+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~ 86 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRW 86 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChH
Confidence 556778888888899999999999999876544
No 307
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=49.45 E-value=45 Score=28.72 Aligned_cols=30 Identities=13% Similarity=0.062 Sum_probs=15.4
Q ss_pred hHHhhHHHHHHHhhhhhhhccc----chhhccCC
Q 022127 150 AWFSAVPWGTMAVSGYMAGKAS----DSLIKAGY 179 (302)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~g~l~----dr~~~~~~ 179 (302)
|.+.+..-+..++.+++.|+.+ .|.|.|++
T Consensus 326 Gal~saaI~vYAlTs~i~GY~~gs~Y~r~gG~~W 359 (593)
T KOG1277|consen 326 GALLSAAIVVYALTSPINGYVSGSFYARLGGRRW 359 (593)
T ss_pred hHHHHHHHHHHHhcccccccccceeeehhccHHH
Confidence 3444444455555555555544 45555543
No 308
>PRK10263 DNA translocase FtsK; Provisional
Probab=48.52 E-value=3e+02 Score=27.86 Aligned_cols=18 Identities=11% Similarity=0.132 Sum_probs=10.6
Q ss_pred HHHHHHHHHhhhhhcccc
Q 022127 255 LAAIISTIGTGYFVQWLG 272 (302)
Q Consensus 255 ~g~~i~~~i~g~l~~~~g 272 (302)
.|+++|..+...+....|
T Consensus 142 gGGIIG~lLs~lL~~LfG 159 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLH 159 (1355)
T ss_pred ccchHHHHHHHHHHHHHh
Confidence 366666666666555544
No 309
>PRK02237 hypothetical protein; Provisional
Probab=46.46 E-value=34 Score=22.74 Aligned_cols=34 Identities=9% Similarity=-0.050 Sum_probs=27.7
Q ss_pred hhhhHHhhHHHHHHHhhhhhhhcccchhhccCCc
Q 022127 147 KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYS 180 (302)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~ 180 (302)
...|-.+..++-..++.+++.++..|+....+..
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D 89 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWD 89 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhH
Confidence 3477788888889999999999999998765443
No 310
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=45.15 E-value=54 Score=18.13 Aligned_cols=35 Identities=14% Similarity=0.187 Sum_probs=16.8
Q ss_pred HHHHHHHHHHhhcC----CchHHHHHHHHHHHHHHHHHh
Q 022127 34 VGLLLTPIMLSTIG----ISGPFILFSSLGLLWLSTWTS 68 (302)
Q Consensus 34 ~~~~~~~~l~~~~g----wr~~f~~~~~~~~~~~~~~~~ 68 (302)
+|..+++++.+.++ +.+.-++.++++.+..+..+.
T Consensus 6 iGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~i~~ 44 (48)
T PF04226_consen 6 IGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLFIYR 44 (48)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHH
Confidence 44444445444433 344445555555554444433
No 311
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=41.68 E-value=1.5e+02 Score=22.17 Aligned_cols=52 Identities=15% Similarity=0.157 Sum_probs=31.8
Q ss_pred hhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHH
Q 022127 4 MSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSS 57 (302)
Q Consensus 4 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~ 57 (302)
..+++.+..|+++|.++.-+-..+..+--.+--..+.++.+.+ ++..++.|+
T Consensus 17 vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~~--~~i~~igG~ 68 (183)
T PF03741_consen 17 VIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSIF--PWILLIGGL 68 (183)
T ss_pred HHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
Confidence 3466777899988877765544444445555556667777653 445555333
No 312
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=41.63 E-value=89 Score=21.46 Aligned_cols=14 Identities=14% Similarity=0.093 Sum_probs=8.7
Q ss_pred HHHHHhhhcCCCCC
Q 022127 63 LSTWTSKVTNDPCN 76 (302)
Q Consensus 63 ~~~~~~~~~~~p~~ 76 (302)
-++.++.+|+.|..
T Consensus 51 Y~i~w~~lp~~p~~ 64 (121)
T TIGR02978 51 YIALWLLLDKKPIN 64 (121)
T ss_pred HHHHHHHHhcCccc
Confidence 33456668877754
No 313
>PRK03612 spermidine synthase; Provisional
Probab=41.31 E-value=78 Score=28.21 Aligned_cols=49 Identities=27% Similarity=0.329 Sum_probs=34.5
Q ss_pred hhhHHHHHhhhhhhHHHHHHHHHHHHH-hhcCCchHHHHHHHHHHHHHHH
Q 022127 17 RASAIGICMGGFHLGNVVGLLLTPIML-STIGISGPFILFSSLGLLWLST 65 (302)
Q Consensus 17 r~~~~~~~~~~~~~g~~~~~~~~~~l~-~~~gwr~~f~~~~~~~~~~~~~ 65 (302)
-++..|-......+|.++|.++.+++. ..+|-....++.+.+.++.+++
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~ 192 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALV 192 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 467788889999999999999987765 4677555555555555554433
No 314
>COG3162 Predicted membrane protein [Function unknown]
Probab=41.05 E-value=1e+02 Score=20.18 Aligned_cols=38 Identities=18% Similarity=0.447 Sum_probs=25.3
Q ss_pred chHHhhcCcc--HHHHHHHHHhhhHHHHHHHhhhhHHHHH
Q 022127 103 SLRHLLSKLP--SWTVIIANITNNWGYFVLLSWMPIYFNT 140 (302)
Q Consensus 103 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (302)
.++++.++|+ .|.+.+.++..++++..+..+.|.++..
T Consensus 14 ~f~eLv~kr~~Fa~~ltl~flv~Y~~filLiaf~~~~l~t 53 (102)
T COG3162 14 RFRELVRKRRRFAVPLTLIFLVVYFGFILLIAFAPGWLAT 53 (102)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHhcC
Confidence 4566665543 4566677777777777777777777654
No 315
>COG1983 PspC Putative stress-responsive transcriptional regulator [Transcription / Signal transduction mechanisms]
Probab=40.75 E-value=76 Score=19.30 Aligned_cols=35 Identities=14% Similarity=0.175 Sum_probs=17.5
Q ss_pred HHHhhcCC-----chHHHHHHHHH------HHHHHHHHhhhcCCCC
Q 022127 41 IMLSTIGI-----SGPFILFSSLG------LLWLSTWTSKVTNDPC 75 (302)
Q Consensus 41 ~l~~~~gw-----r~~f~~~~~~~------~~~~~~~~~~~~~~p~ 75 (302)
-+.+++|| |..+.+..... ++.-++.++.+|+.|.
T Consensus 20 Gla~yf~id~tlVRll~vl~~~~~~~~~~~ii~Yiia~~imP~~~~ 65 (70)
T COG1983 20 GLAEYFGIDPTLVRLLFVLLTLFGGLTGFGIIAYIIAALIMPSEED 65 (70)
T ss_pred hHHHHhCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHCCCCcc
Confidence 34566665 34444433332 3334455666776554
No 316
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=40.30 E-value=1.3e+02 Score=24.55 Aligned_cols=37 Identities=19% Similarity=0.156 Sum_probs=22.9
Q ss_pred CccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCc
Q 022127 13 PSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGIS 49 (302)
Q Consensus 13 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr 49 (302)
+|.+|.+..++-......+.+.+...+..+...+++.
T Consensus 8 ~~~er~k~~~~G~~vl~ta~la~~s~~~a~~~~~~~~ 44 (301)
T PF14362_consen 8 SPAERNKYAGIGAAVLFTALLAGLSGGYALYTVFGGP 44 (301)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 5778888888777666665555444444444455554
No 317
>PRK10995 inner membrane protein; Provisional
Probab=39.76 E-value=1.8e+02 Score=22.52 Aligned_cols=29 Identities=24% Similarity=0.296 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHhhcCCch-HHHHHHHHHHH
Q 022127 33 VVGLLLTPIMLSTIGISG-PFILFSSLGLL 61 (302)
Q Consensus 33 ~~~~~~~~~l~~~~gwr~-~f~~~~~~~~~ 61 (302)
.+....|..+.+.+|... .|-+.|.+.+.
T Consensus 56 l~f~~~G~~il~~fgIs~~a~rIaGGilL~ 85 (221)
T PRK10995 56 MVAFYAGQLVMSTFGISIPGLRIAGGLIVA 85 (221)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 445555667777777554 56665554444
No 318
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=39.70 E-value=20 Score=24.88 Aligned_cols=15 Identities=7% Similarity=0.082 Sum_probs=7.6
Q ss_pred chHHHHHHHHHHHHH
Q 022127 49 SGPFILFSSLGLLWL 63 (302)
Q Consensus 49 r~~f~~~~~~~~~~~ 63 (302)
||++++..++.++++
T Consensus 1 RW~l~~iii~~i~l~ 15 (130)
T PF12273_consen 1 RWVLFAIIIVAILLF 15 (130)
T ss_pred CeeeHHHHHHHHHHH
Confidence 566665444444433
No 319
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=38.56 E-value=2.9e+02 Score=24.60 Aligned_cols=34 Identities=9% Similarity=0.043 Sum_probs=27.4
Q ss_pred ccchhhhhHHhhHHHHHHHhhhhhhhcccchhhc
Q 022127 143 NVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIK 176 (302)
Q Consensus 143 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~ 176 (302)
-.+..|+.-.+...++++-++.+++|.+...+.+
T Consensus 172 itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 172 ITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567888888888888888888888887777665
No 320
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=38.54 E-value=60 Score=25.96 Aligned_cols=62 Identities=13% Similarity=0.137 Sum_probs=45.9
Q ss_pred HHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhccc---------chhhccC
Q 022127 116 VIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKAS---------DSLIKAG 178 (302)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~---------dr~~~~~ 178 (302)
.-+..+..........+|+-.|+++ .|.++...+.++....+...+..++.|..+ ||+|||+
T Consensus 22 yGvGHmlNDitAScWFTYlllfltq-iglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~ 92 (412)
T KOG4830|consen 22 YGVGHMLNDITASCWFTYLLLFLTQ-IGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRM 92 (412)
T ss_pred echhHHHhhHHHHHHHHHHHHHHHH-hcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhccee
Confidence 3445555555666667778888888 688998888888888888888888877544 5788874
No 321
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=38.00 E-value=2.8e+02 Score=24.26 Aligned_cols=145 Identities=10% Similarity=-0.105 Sum_probs=67.3
Q ss_pred hcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhh-cCCchHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCChHHHHH
Q 022127 9 SRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST-IGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRL 87 (302)
Q Consensus 9 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 87 (302)
.|..|+|+|-..........+.-..++....|.+... .+++........-.++..+...+.--.-|+..-. +
T Consensus 11 ~~~vp~~~r~~~~~~~~vWfga~~~ias~~~G~ll~~~L~~~~si~aillG~llG~i~~A~~s~~Ga~~Glp--q----- 83 (442)
T COG1457 11 IEPVPEESRKGWLNLFLVWFGANFTIASMVTGGLLVPGLSFGQSLLAILLGNLLGGIFMAYFSYQGARTGLP--Q----- 83 (442)
T ss_pred CCCCChhhhhcchhHHHHHHHhHhHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC--h-----
Confidence 3566777774444554555554455555554444332 5666555543332233222222221112221110 0
Q ss_pred HHhcCcccccCCCCcchHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhh
Q 022127 88 IQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMA 167 (302)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~ 167 (302)
-...|..+..+.-+...+.....+.+.++.+.++.-.... .. +...........++...+..+++
T Consensus 84 -------------mi~sR~~fG~~Gs~l~sll~~~~~iGW~~v~~~l~~~a~~-~~-~~~~~~~~ili~g~l~~l~~ifG 148 (442)
T COG1457 84 -------------MILSRYPFGVKGSILPSLLNGITLIGWFGVNVILSGIAIG-SG-TGLPVWAGILIIGVLMTLVTIFG 148 (442)
T ss_pred -------------heeecccccchhHHHHHHHHHHHHhhHHHHHHHHhccccc-cC-CCCcHHHHHHHHHHHHHHHHHHh
Confidence 0112233444545666666666677777777665544311 11 22233444444455555555555
Q ss_pred hcccchhh
Q 022127 168 GKASDSLI 175 (302)
Q Consensus 168 g~l~dr~~ 175 (302)
-+...++.
T Consensus 149 ~r~l~~l~ 156 (442)
T COG1457 149 YRALHKLE 156 (442)
T ss_pred HHHHHHHH
Confidence 55555553
No 322
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate. The protein is located in the inner membrane.; GO: 0015501 glutamate:sodium symporter activity, 0015813 L-glutamate transport, 0016021 integral to membrane
Probab=36.90 E-value=2.6e+02 Score=23.68 Aligned_cols=24 Identities=13% Similarity=0.058 Sum_probs=15.1
Q ss_pred HHHHHhhhhhhhcccchhhccCCc
Q 022127 157 WGTMAVSGYMAGKASDSLIKAGYS 180 (302)
Q Consensus 157 ~~~~~~~~~~~g~l~dr~~~~~~~ 180 (302)
.+..+++..+.-.+.||.+..+..
T Consensus 250 f~~ami~g~ivrn~~~~~~~~~id 273 (368)
T PF03616_consen 250 FVGAMIVGIIVRNILDKTGKYKID 273 (368)
T ss_pred HHHHHHHHHHHHHHHHHhCcccCC
Confidence 345556666667777887766543
No 323
>COG2095 MarC Multiple antibiotic transporter [Intracellular trafficking and secretion]
Probab=35.62 E-value=2e+02 Score=21.95 Aligned_cols=50 Identities=24% Similarity=0.071 Sum_probs=30.2
Q ss_pred hhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCch-HHHHHHH
Q 022127 8 TSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISG-PFILFSS 57 (302)
Q Consensus 8 i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~-~f~~~~~ 57 (302)
+.+-+++++|.+..=--.........+....|..+.+.+|-.. .|-+.|.
T Consensus 30 lt~~~~~~~r~~v~~ra~i~a~~ill~f~~~G~~il~~fgIsi~a~rIAGG 80 (203)
T COG2095 30 LTKGLSPEERNRVALRASIIALLILLVFLLLGEGILRFFGISIDAFRIAGG 80 (203)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHhhh
Confidence 4556677777776555555555555666667778888777543 3444444
No 324
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=34.93 E-value=3.1e+02 Score=23.97 Aligned_cols=41 Identities=15% Similarity=0.159 Sum_probs=25.4
Q ss_pred ccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHH
Q 022127 14 SHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLG 59 (302)
Q Consensus 14 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~ 59 (302)
+++.+...++..++.+.|...-|...+. +|-++..+..+++
T Consensus 19 ~~d~~W~l~l~GTAIGAGmLfLPI~~g~-----~Gf~p~lillll~ 59 (443)
T PRK13629 19 KSDTTWTLGLFGTAIGAGVLFFPIRAGF-----GGLIPILLMLVLA 59 (443)
T ss_pred cccchHHHHHHHHHHhHHHHHHHHHHhc-----chHHHHHHHHHHH
Confidence 4456777888888877777777766544 3444444444433
No 325
>PRK11111 hypothetical protein; Provisional
Probab=34.77 E-value=2.1e+02 Score=22.00 Aligned_cols=48 Identities=19% Similarity=0.153 Sum_probs=23.7
Q ss_pred cccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchH-HHHHHH
Q 022127 10 RWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGP-FILFSS 57 (302)
Q Consensus 10 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~-f~~~~~ 57 (302)
+-.++++|.+..-.......+-..+....|.++.+.+|-... |-+.|.
T Consensus 35 ~~~s~~~r~~ia~~a~l~a~~ill~f~~~G~~iL~~fGIsl~afrIaGG 83 (214)
T PRK11111 35 SHQTAAERNKTNLTANLSVAIILLISLFLGDFILNLFGISIDSFRIAGG 83 (214)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 334455554433222222333334555667788888886543 444443
No 326
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=33.70 E-value=1.3e+02 Score=19.16 Aligned_cols=40 Identities=20% Similarity=0.074 Sum_probs=26.3
Q ss_pred HHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHH
Q 022127 21 IGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGL 60 (302)
Q Consensus 21 ~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~ 60 (302)
-|+..+...+|..+|.+....+.++...+..+....+.+.
T Consensus 29 ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~ 68 (85)
T PF06779_consen 29 AGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTV 68 (85)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 4667778888888888888877666555555554333333
No 327
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=33.30 E-value=2.5e+02 Score=22.41 Aligned_cols=21 Identities=10% Similarity=0.012 Sum_probs=10.9
Q ss_pred cCccHHHHHHHHHhhhHHHHH
Q 022127 109 SKLPSWTVIIANITNNWGYFV 129 (302)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~ 129 (302)
.+|-++..+...|+.-++--.
T Consensus 205 fspifikaFsltF~aEwGDRS 225 (294)
T KOG2881|consen 205 FSPIFIKAFSLTFLAEWGDRS 225 (294)
T ss_pred ccHHHHHHHHHHHHHHhccHH
Confidence 345555555555555554433
No 328
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=33.25 E-value=1.1e+02 Score=25.27 Aligned_cols=137 Identities=11% Similarity=0.041 Sum_probs=68.4
Q ss_pred hhHHhhHHHHHHHhhhhhhhcccchhhccCCchhHHHHHHHHHhhhhhHHHHHHhhcccchHHHHHHHHHHHHHhhhhhh
Q 022127 149 AAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQA 228 (302)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (302)
.|.....-.+-..+..+......||+.-. .|. .+..++.+.++.+..+.++.+..+...++.....|+.-.
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~-------~Ri--~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEi 134 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFG-------FRI--ALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEI 134 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccc-------hHH--HHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCccee
Confidence 34444455566777778888888887432 121 244555666677777777777666666666665555443
Q ss_pred hhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhhcccc-chhHHHHHHHHHHH-HHHHHHHhhccC
Q 022127 229 GYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG-SFQAFLTVTAGLYF-VTTIFWNLYSTG 298 (302)
Q Consensus 229 ~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g-~~~~~~~~~~~~~~-~~~~~~~~~~~~ 298 (302)
....+.+...+... +-.+.....++.+|..-...+.+..+ +.+...++...+-+ .+...+++++++
T Consensus 135 TFL~lss~Y~~~~i----~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~p 202 (409)
T KOG3880|consen 135 TFLALSSRYPSIVI----AGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSP 202 (409)
T ss_pred ehhhhhccCCCcee----ccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCC
Confidence 33333333222211 11111112233444444444444222 35555555544443 333334444443
No 329
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.22 E-value=1.7e+02 Score=19.67 Aligned_cols=52 Identities=13% Similarity=0.035 Sum_probs=28.2
Q ss_pred ccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhc-C-CchHHHHHHHHHHHHHHH
Q 022127 14 SHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-G-ISGPFILFSSLGLLWLST 65 (302)
Q Consensus 14 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-g-wr~~f~~~~~~~~~~~~~ 65 (302)
+++++.+.++--+.--++.++-...-||+.+++ | =.|-.++.-++++...++
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~l 90 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVL 90 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 345667777666666666555555556777754 2 233344444445554443
No 330
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=29.98 E-value=1.2e+02 Score=17.57 Aligned_cols=34 Identities=24% Similarity=0.351 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHH
Q 022127 30 LGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWL 63 (302)
Q Consensus 30 ~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~ 63 (302)
+|.+++...+..-...++++....+..+.+++..
T Consensus 13 l~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~ 46 (57)
T PF11151_consen 13 LGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVA 46 (57)
T ss_pred HHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHH
Confidence 4455554444433334555555444444444433
No 331
>COG1585 Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=29.82 E-value=1.8e+02 Score=20.65 Aligned_cols=28 Identities=18% Similarity=0.101 Sum_probs=20.7
Q ss_pred hcCCchHHHHHHHHHHHHHHHHHhhhcC
Q 022127 45 TIGISGPFILFSSLGLLWLSTWTSKVTN 72 (302)
Q Consensus 45 ~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 72 (302)
..+|...+...++++++...+...+.++
T Consensus 44 ~~~~~~q~v~f~~lsv~~~~l~rr~~~~ 71 (140)
T COG1585 44 LLSWWLQLVLFAILSVLLALLGRRFVRR 71 (140)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4567888888888888877777776654
No 332
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=29.00 E-value=1.3e+02 Score=20.58 Aligned_cols=17 Identities=18% Similarity=0.071 Sum_probs=10.1
Q ss_pred HHHHHHHHhhhcCCCCC
Q 022127 60 LLWLSTWTSKVTNDPCN 76 (302)
Q Consensus 60 ~~~~~~~~~~~~~~p~~ 76 (302)
++.-++.++.+|+.|..
T Consensus 53 ~~~Yi~l~~~lp~~P~~ 69 (118)
T PRK10697 53 LVAYIILSFALDPMPDN 69 (118)
T ss_pred HHHHHHHHHhccCCccc
Confidence 34444566678877754
No 333
>TIGR03717 R_switched_YjbE integral membrane protein, YjbE family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family commonly are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains protein YjbE from Bacillus subtilis. A transport function is proposed.
Probab=28.97 E-value=2.4e+02 Score=20.88 Aligned_cols=39 Identities=23% Similarity=0.284 Sum_probs=25.0
Q ss_pred hhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHh
Q 022127 6 TLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS 44 (302)
Q Consensus 6 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 44 (302)
++..+-.|+++|.++.-+-.....+--.+....+.++.+
T Consensus 21 ~~~t~~lp~~~r~~~~~~G~~~A~vlr~if~~~G~~ll~ 59 (176)
T TIGR03717 21 ALAARNLPAHQRKKAIFWGTAGAIVLRILLTAVAVYLLA 59 (176)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777788887776655554544455555566777776
No 334
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=28.94 E-value=57 Score=25.27 Aligned_cols=43 Identities=14% Similarity=0.050 Sum_probs=24.1
Q ss_pred HhhhhhhhhhhHHhhhccchhhhHHHHHHHHHHHHHHHHHHHh
Q 022127 222 LSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGT 264 (302)
Q Consensus 222 ~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~ 264 (302)
+.+...........+..|+...+..++....+-+.+..|-+..
T Consensus 184 GSgSMMaAa~~aL~~~~P~~a~~i~A~AaaSNllt~~~G~Y~~ 226 (241)
T PF11299_consen 184 GSGSMMAAASGALAAAYPEMADQILAFAAASNLLTSVTGLYMS 226 (241)
T ss_pred cHHHHHHHHHHHHHHHCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444555555666787766666665555555555554443
No 335
>PTZ00370 STEVOR; Provisional
Probab=28.91 E-value=1e+02 Score=24.75 Aligned_cols=27 Identities=15% Similarity=0.034 Sum_probs=13.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhccCc
Q 022127 273 SFQAFLTVTAGLYFVTTIFWNLYSTGE 299 (302)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (302)
.|..+-++..++.++..+++.++.|++
T Consensus 256 Pygiaalvllil~vvliilYiwlyrrR 282 (296)
T PTZ00370 256 PYGIAALVLLILAVVLIILYIWLYRRR 282 (296)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 354444444444455455555554444
No 336
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=28.57 E-value=3.2e+02 Score=22.14 Aligned_cols=45 Identities=16% Similarity=0.128 Sum_probs=22.4
Q ss_pred hhhhhhhcccCccchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCC
Q 022127 3 AMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGI 48 (302)
Q Consensus 3 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw 48 (302)
..+++++-.||++++--..--.....+++.++-+++| .+.+...|
T Consensus 38 PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g-~~l~~~~~ 82 (287)
T PF07760_consen 38 PGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIG-LLLNYTPW 82 (287)
T ss_pred ccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHH-HHHHhccC
Confidence 4567788888865432222222333344445555544 44444333
No 337
>PHA03231 glycoprotein BALF4; Provisional
Probab=28.56 E-value=89 Score=29.45 Aligned_cols=23 Identities=17% Similarity=0.342 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhh
Q 022127 246 HGIANSAGTLAAIISTIGTGYFV 268 (302)
Q Consensus 246 ~g~~~~~~~~g~~i~~~i~g~l~ 268 (302)
-++.+.+..+++++++.+.|.+.
T Consensus 676 k~vg~vv~~v~ga~~SiVsG~~s 698 (829)
T PHA03231 676 KAVGNVVSGVAGAVGSIVSGVIS 698 (829)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHH
Confidence 35566777777777777777653
No 338
>COG1288 Predicted membrane protein [Function unknown]
Probab=28.02 E-value=4.1e+02 Score=23.22 Aligned_cols=33 Identities=27% Similarity=0.322 Sum_probs=20.2
Q ss_pred hcCCchHHHHHHHHHHHHHHHHH-hhhcCCCCCC
Q 022127 45 TIGISGPFILFSSLGLLWLSTWT-SKVTNDPCNS 77 (302)
Q Consensus 45 ~~gwr~~f~~~~~~~~~~~~~~~-~~~~~~p~~~ 77 (302)
-.+||...|+...+..+..+.++ ..++++|+..
T Consensus 215 G~~~Riv~~v~~~~~~i~y~~~Ya~KvkkdP~~S 248 (481)
T COG1288 215 GMGLRIVVWVVFTLISIIYVYWYASKVKKDPTLS 248 (481)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 45899999987766655444332 3355666543
No 339
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=27.94 E-value=96 Score=17.07 Aligned_cols=22 Identities=18% Similarity=0.395 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHHhhccCc
Q 022127 278 LTVTAGLYFVTTIFWNLYSTGE 299 (302)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~ 299 (302)
..+...+.+++.+.+.+.++++
T Consensus 14 ~~v~~~~~F~gi~~w~~~~~~k 35 (49)
T PF05545_consen 14 GTVLFFVFFIGIVIWAYRPRNK 35 (49)
T ss_pred HHHHHHHHHHHHHHHHHcccch
Confidence 3334444445555444444433
No 340
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=27.69 E-value=2.2e+02 Score=20.08 Aligned_cols=27 Identities=11% Similarity=-0.017 Sum_probs=19.7
Q ss_pred hhcccCccchhhHHHHHhhhhhhHHHH
Q 022127 8 TSRWFPSHERASAIGICMGGFHLGNVV 34 (302)
Q Consensus 8 i~~~~~~~~r~~~~~~~~~~~~~g~~~ 34 (302)
+.|.+|++.|....+..+.......-.
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~~k~~ 86 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSAVKSL 86 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999998887776555444433
No 341
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=27.40 E-value=2.2e+02 Score=24.42 Aligned_cols=47 Identities=11% Similarity=0.134 Sum_probs=31.8
Q ss_pred cchhhHHHHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHH
Q 022127 15 HERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLL 61 (302)
Q Consensus 15 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~ 61 (302)
+...++++..-..-..-..+.|.+.|.+.+..+-|..-.+.++-.++
T Consensus 171 s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 171 SVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred HHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 33444456666677777889999999998888777755544444444
No 342
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=27.34 E-value=1.4e+02 Score=17.42 Aligned_cols=21 Identities=14% Similarity=0.194 Sum_probs=15.9
Q ss_pred CCchHHHHHHHHHHHHHHHHH
Q 022127 47 GISGPFILFSSLGLLWLSTWT 67 (302)
Q Consensus 47 gwr~~f~~~~~~~~~~~~~~~ 67 (302)
|||....+.+.++++.+.+.-
T Consensus 4 g~r~~~~~ggfVg~iG~a~Yp 24 (58)
T PF15061_consen 4 GWRYALFVGGFVGLIGAALYP 24 (58)
T ss_pred cccchhhHHHHHHHHHHHHhh
Confidence 899999888888877654443
No 343
>PF13073 DUF3937: Protein of unknown function (DUF3937)
Probab=26.94 E-value=1.4e+02 Score=17.56 Aligned_cols=36 Identities=3% Similarity=-0.054 Sum_probs=18.1
Q ss_pred hcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhc
Q 022127 108 LSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFN 143 (302)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 143 (302)
|+|++.....+..+.+.........|...|++..-|
T Consensus 2 f~nkklir~gltlfv~L~vi~FtigYfq~Yl~saag 37 (73)
T PF13073_consen 2 FTNKKLIRFGLTLFVFLSVIDFTIGYFQTYLESAAG 37 (73)
T ss_pred CccchhhhhhhHHHHHHHHHHhhHHHHHHHHHhccC
Confidence 456665555554444433333334555566665433
No 344
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=26.93 E-value=4e+02 Score=22.67 Aligned_cols=35 Identities=20% Similarity=0.349 Sum_probs=21.6
Q ss_pred cccCccchhhHHHHHh-hhhhhHHHHHHHHHHHHHhhcCCc
Q 022127 10 RWFPSHERASAIGICM-GGFHLGNVVGLLLTPIMLSTIGIS 49 (302)
Q Consensus 10 ~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~gwr 49 (302)
|+.|.+ |-..++... ...+.|+++||.++ ..+||-
T Consensus 48 DYvP~~-~~vlfghhf~sIAGaGPI~GPi~a----a~~Gwl 83 (376)
T PF02554_consen 48 DYVPTN-KWVLFGHHFASIAGAGPIVGPILA----AQFGWL 83 (376)
T ss_pred CCCCCc-hHHhhHHHHHHHhccccchHHHHH----HHhcch
Confidence 566654 456666554 35566777777666 356887
No 345
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=26.61 E-value=3.9e+02 Score=22.52 Aligned_cols=60 Identities=12% Similarity=-0.032 Sum_probs=30.2
Q ss_pred ccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhhHHHHHHHhhhhhhhcccchhhcc
Q 022127 111 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 177 (302)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 177 (302)
|+++.+.....+.+..+.+....- ..... ++.....+.+ .+.-+..+++.+.+.+++|.|
T Consensus 29 knv~i~s~~fl~~f~a~~gl~nlq-~~vn~--~lg~~sl~~~----y~~l~~s~m~~~~~Ir~~g~K 88 (390)
T KOG3097|consen 29 KNVLILSIAFLLTFTAYLGLQNLQ-TSVNY--DLGTVSLGAL----YLSLIDSSMFMPLLIRFLGTK 88 (390)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHH-HHHhc--Ccccchhhhh----hHHHHHHHHHHHHHHHHHhhH
Confidence 455666666666555555544322 22221 2222222222 344455556666888888865
No 346
>PRK10457 hypothetical protein; Provisional
Probab=26.14 E-value=1.8e+02 Score=18.39 Aligned_cols=14 Identities=7% Similarity=0.171 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHHHH
Q 022127 53 ILFSSLGLLWLSTW 66 (302)
Q Consensus 53 ~~~~~~~~~~~~~~ 66 (302)
++.+++..+..+..
T Consensus 63 ~i~aviGAiill~i 76 (82)
T PRK10457 63 FVVAVIGAIVVLFI 76 (82)
T ss_pred HHHHHHHHHHHHHH
Confidence 44455454444333
No 347
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=26.13 E-value=2.9e+02 Score=20.89 Aligned_cols=30 Identities=23% Similarity=0.380 Sum_probs=20.1
Q ss_pred cchhhHHHHHhhhhhhHHHHHHHHHHHHHh
Q 022127 15 HERASAIGICMGGFHLGNVVGLLLTPIMLS 44 (302)
Q Consensus 15 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 44 (302)
++.+++.++--.+..+|.++|..+..++..
T Consensus 137 ~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 137 RKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 445777777777777777777777666643
No 348
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=24.03 E-value=1.4e+02 Score=18.44 Aligned_cols=48 Identities=13% Similarity=0.152 Sum_probs=22.7
Q ss_pred HHHhhhhhhHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHhhhcCCCC
Q 022127 22 GICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPC 75 (302)
Q Consensus 22 ~~~~~~~~~g~~~~~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~p~ 75 (302)
-+.+....++.+++-.. |++.+. .+..+++.++-.++.+ ...+|+-|-
T Consensus 11 ~l~~~il~~~~iisfi~-Gy~~q~--~~~~~~~~~~g~~~~~---lv~vP~Wp~ 58 (76)
T PF06645_consen 11 KLMQYILIISAIISFIV-GYITQS--FSYTFYIYGAGVVLTL---LVVVPPWPF 58 (76)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHH---hheeCCcHh
Confidence 34445555566665444 455553 3555555444333322 233555543
No 349
>PF15192 TMEM213: TMEM213 family
Probab=23.66 E-value=1.1e+02 Score=18.62 Aligned_cols=15 Identities=20% Similarity=0.197 Sum_probs=8.5
Q ss_pred HHHHhhcCCchHHHH
Q 022127 40 PIMLSTIGISGPFIL 54 (302)
Q Consensus 40 ~~l~~~~gwr~~f~~ 54 (302)
||+....||..-|+.
T Consensus 46 GWIAAAVGWSLwFLT 60 (82)
T PF15192_consen 46 GWIAAAVGWSLWFLT 60 (82)
T ss_pred hHHHHHHhHHHHHHH
Confidence 455555677655543
No 350
>cd02434 Nodulin-21_like_3 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_3: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=23.47 E-value=3.6e+02 Score=20.96 Aligned_cols=20 Identities=15% Similarity=0.345 Sum_probs=10.4
Q ss_pred HHhhhhhhhcccchhhccCC
Q 022127 160 MAVSGYMAGKASDSLIKAGY 179 (302)
Q Consensus 160 ~~~~~~~~g~l~dr~~~~~~ 179 (302)
..+.-.+.|.+..|+.+++.
T Consensus 180 ~~~~L~~~G~~~~~~~~~~~ 199 (225)
T cd02434 180 VAFTLFLLGSFKSKLYNGKW 199 (225)
T ss_pred HHHHHHHHHHHHHHhcCCch
Confidence 34444555666666655443
No 351
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=22.97 E-value=1.3e+02 Score=25.47 Aligned_cols=71 Identities=11% Similarity=0.162 Sum_probs=43.1
Q ss_pred hhhHH-hhhccchhhhHHHHHHHHHHHHHHHHHHHhhhhhccc-cchhHHHHHHHHHHHHHHHHHHhhccCcc
Q 022127 230 YLLNI-QEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWL-GSFQAFLTVTAGLYFVTTIFWNLYSTGER 300 (302)
Q Consensus 230 ~~~~~-~~~~p~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (302)
.++++ +.+.|++.-++.|-.....-.|-..|..++-.+.+.. -+|...-.+......++..+..++++.+|
T Consensus 115 YysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~r 187 (433)
T KOG3810|consen 115 YYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKR 187 (433)
T ss_pred hhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCch
Confidence 34444 3345577777888777766666666666666555431 14655556666666666666666666553
No 352
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=22.84 E-value=3e+02 Score=19.89 Aligned_cols=74 Identities=11% Similarity=-0.011 Sum_probs=35.6
Q ss_pred chHHhhcCccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccc-hhhhhHHhhHHHHHHHhhhhhhhcccchhhcc
Q 022127 103 SLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVN-LKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 177 (302)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 177 (302)
.+-+...+|....+.+....-.....+... .-.|+.+...++ +..+.++.+...++..+..+-.|.++..+...
T Consensus 52 ~IP~~Vs~RM~rRm~~~~GiP~~lG~~~f~-~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllGisYGilSaSWD~~ 126 (153)
T PF11947_consen 52 AIPEVVSNRMLRRMAVFVGIPTALGVAVFV-VFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLGISYGILSASWDPE 126 (153)
T ss_pred ccCHHHHHHHHHHHHHHhchHHHHHHHHHH-HHHHHHhccccccCchHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 344455555554444444333222222111 112333322233 23444555555666666667788888877654
No 353
>PF02667 SCFA_trans: Short chain fatty acid transporter; InterPro: IPR006160 Members of this family may be short chain fatty acid transporters although there has been no experimental characterisation of this function.
Probab=22.72 E-value=4e+02 Score=23.37 Aligned_cols=18 Identities=11% Similarity=0.110 Sum_probs=9.1
Q ss_pred CcchHHhhcCccHHHHHH
Q 022127 101 PPSLRHLLSKLPSWTVII 118 (302)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~ 118 (302)
+....|-+.+.+.+...+
T Consensus 241 ~~tpae~le~S~~l~~li 258 (453)
T PF02667_consen 241 RATPAERLENSRILSLLI 258 (453)
T ss_pred cCCHHHHHhccHHHHHHH
Confidence 344555555655544443
No 354
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=21.88 E-value=2.3e+02 Score=18.18 Aligned_cols=51 Identities=12% Similarity=0.225 Sum_probs=30.6
Q ss_pred hHHhhcC--ccHHHHHHHHHhhhHHHHHHHhhhhHHHHHhhccchhhhhHHhh
Q 022127 104 LRHLLSK--LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSA 154 (302)
Q Consensus 104 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 154 (302)
++++.+. +-.+.+....+..+.++.....+.|..+.....-+....|+...
T Consensus 7 f~~L~r~r~r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~g 59 (91)
T PF04341_consen 7 FQELVRRRRRLAWPLSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVLG 59 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHHH
Confidence 4444443 33456666777777777788888888887644322344454443
No 355
>PF06783 UPF0239: Uncharacterised protein family (UPF0239); InterPro: IPR009621 This is a group of transmembrane proteins of unknown function.; GO: 0016021 integral to membrane
Probab=21.15 E-value=1.9e+02 Score=18.40 Aligned_cols=17 Identities=6% Similarity=0.026 Sum_probs=8.8
Q ss_pred chHHHHHHHHHHHHHHH
Q 022127 49 SGPFILFSSLGLLWLST 65 (302)
Q Consensus 49 r~~f~~~~~~~~~~~~~ 65 (302)
|+..++.+++=+++.+.
T Consensus 23 RYGLf~GAIFQliCilA 39 (85)
T PF06783_consen 23 RYGLFVGAIFQLICILA 39 (85)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 45555655555554433
No 356
>PF04117 Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR007248 The 22 kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes. PMP22 seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information []. Mpv17 is a closely related peroxisomal protein involved in the development of early-onset glomerulosclerosis []. A member of this family found in Saccharomyces cerevisiae (Baker's yeast) is an integral membrane protein of the inner mitochondrial membrane and has been suggested to play a role in mitochondrial function during heat shock [].; GO: 0016021 integral to membrane
Probab=20.27 E-value=59 Score=19.36 Aligned_cols=27 Identities=19% Similarity=0.314 Sum_probs=13.5
Q ss_pred chhhhhhhcccCccchhhHHHHHhhhh
Q 022127 2 PAMSTLTSRWFPSHERASAIGICMGGF 28 (302)
Q Consensus 2 p~~~~~i~~~~~~~~r~~~~~~~~~~~ 28 (302)
|.++.+.-...|++.|-...+..+.++
T Consensus 32 p~~~~vnF~~vP~~~Rv~~~~~v~~~W 58 (68)
T PF04117_consen 32 PPAQIVNFRYVPPHYRVLFVNVVSFFW 58 (68)
T ss_pred HHHHHHHhcccChhhhhhhhhhHHHHH
Confidence 344444445555555555555444433
No 357
>PF09911 DUF2140: Uncharacterized protein conserved in bacteria (DUF2140); InterPro: IPR018672 This family of conserved hypothetical proteins has no known function.
Probab=20.12 E-value=50 Score=24.72 Aligned_cols=17 Identities=18% Similarity=0.331 Sum_probs=11.4
Q ss_pred CCchHHHHHHHHHHHHH
Q 022127 47 GISGPFILFSSLGLLWL 63 (302)
Q Consensus 47 gwr~~f~~~~~~~~~~~ 63 (302)
-|+|.|++...+.++..
T Consensus 2 ~WK~aF~~Lla~~l~~~ 18 (187)
T PF09911_consen 2 WWKWAFLILLALNLAFV 18 (187)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 39999998655544433
Done!