BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022131
(302 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WP85|PP150_ARATH Pentatricopeptide repeat-containing protein At2g13420,
mitochondrial OS=Arabidopsis thaliana GN=At2g13420 PE=2
SV=1
Length = 509
Score = 475 bits (1222), Expect = e-133, Method: Compositional matrix adjust.
Identities = 222/302 (73%), Positives = 263/302 (87%), Gaps = 1/302 (0%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+YT LI GWCK+ RIDMAE+FL EMIE G+EPNVVTYNVLLNG+CR ASLHP ERFE+ +
Sbjct: 209 VYTILIAGWCKLRRIDMAEKFLVEMIESGIEPNVVTYNVLLNGICRTASLHPEERFERNV 268
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
RNAEKVFDEMR RGIEPDVTSFSIVLH+YSRAH+ +L+LDK+ MK KGI PT+ TY+SV
Sbjct: 269 RNAEKVFDEMRQRGIEPDVTSFSIVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSV 328
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
VKCLCSCGR+E+AEELL MV +G+ PS+ TYNCFFKEY+GRKDANGAM LYR+MK +GL
Sbjct: 329 VKCLCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKGRKDANGAMNLYRKMK-NGL 387
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
C P+ +YN+L+G F+ L +M+ V+EIW+D+K S GPDLDSYT L+HGLC K+KWKEAC
Sbjct: 388 CKPSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDSYTSLVHGLCSKEKWKEAC 447
Query: 241 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKPY 300
YFVEMIE+G LPQK+TFETLY+GLIQS+ +RTWRRLKKKLDEESITFGSEFQ Y F+PY
Sbjct: 448 GYFVEMIERGFLPQKLTFETLYKGLIQSNKMRTWRRLKKKLDEESITFGSEFQRYPFEPY 507
Query: 301 RR 302
+R
Sbjct: 508 KR 509
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 105/230 (45%), Gaps = 37/230 (16%)
Query: 34 VVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH 93
+V + LL+ +C+ + A VF+E R D ++I++ + +
Sbjct: 173 LVEFGFLLDTLCKYGY----------TKMAVGVFNE-RKEEFGSDEKVYTILIAGWCKLR 221
Query: 94 QPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYN 153
+ ++ L M E GI P V TY+ ++ NG+C +A +
Sbjct: 222 RIDMAEKFLVEMIESGIEPNVVTYNVLL---------------------NGICRTASLH- 259
Query: 154 CFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKG 213
E R ++ A K++ +M++ G+ P++ S++I++ M+ ++ ++ + +K
Sbjct: 260 ---PEERFERNVRNAEKVFDEMRQRGI-EPDVTSFSIVLHMYSRAHKAELTLDKMKLMKA 315
Query: 214 SGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 263
G+ P +++YT ++ LC + +EA + M+E G+ P T+ ++
Sbjct: 316 KGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFFK 365
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 82/195 (42%), Gaps = 15/195 (7%)
Query: 93 HQPQLSLDKLNFMKEKGICPTVAT-YSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAET 151
H +++L +++ T T ++ ++ L + + +L+ EM + S ET
Sbjct: 83 HNSKIALSFFQYLRSLPSPSTTPTSFNLIIDILGRVRQFDVVRQLIVEMDQT----SPET 138
Query: 152 YNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPN-----MHSYNILIGMFMALNRMDMVRE 206
+ K R A G + + +D C + + L+ M
Sbjct: 139 FLILVK----RLIAAGLTRQAVRAFDDAPCFLENRRFRLVEFGFLLDTLCKYGYTKMAVG 194
Query: 207 IWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 266
++N+ K G D YT+LI G C+ ++ A ++ VEMIE G+ P VT+ L G+
Sbjct: 195 VFNERKEE-FGSDEKVYTILIAGWCKLRRIDMAEKFLVEMIESGIEPNVVTYNVLLNGIC 253
Query: 267 QSDMLRTWRRLKKKL 281
++ L R ++ +
Sbjct: 254 RTASLHPEERFERNV 268
>sp|Q9SSR6|PPR78_ARATH Pentatricopeptide repeat-containing protein At1g52640,
mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2
SV=1
Length = 523
Score = 157 bits (398), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 138/266 (51%), Gaps = 12/266 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y+ L+ GW +I A + EM+ER +++ YN LL+ +C+ +
Sbjct: 211 YSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGD----------VD 260
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
K+F EM G++PD SF+I +H Y A + L+ MK + P V T++ ++
Sbjct: 261 GGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHII 320
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
K LC +++DA LL EM++ G P TYN + + N A KL +M C
Sbjct: 321 KTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK-C 379
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQ-KWKEAC 240
+P+ H+YN+++ + + + R D EIW + P + +YT++IHGL K+ K +EAC
Sbjct: 380 LPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEAC 439
Query: 241 QYFVEMIEKGLLPQKVTFETLYRGLI 266
+YF MI++G+ P T E L L+
Sbjct: 440 RYFEMMIDEGIPPYSTTVEMLRNRLV 465
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 1/188 (0%)
Query: 82 FSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMV 141
F IV YSRA+ P + N M E GI P V ++ LC + A+E G+
Sbjct: 141 FWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAK 200
Query: 142 RNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRM 201
G+ PSA+TY+ + + +DA+GA K++ +M E CV ++ +YN L+ +
Sbjct: 201 GFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERN-CVVDLLAYNALLDALCKSGDV 259
Query: 202 DMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 261
D +++ ++ GL PD S+ + IH C+ A + M L+P TF +
Sbjct: 260 DGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHI 319
Query: 262 YRGLIQSD 269
+ L +++
Sbjct: 320 IKTLCKNE 327
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 118/260 (45%), Gaps = 11/260 (4%)
Query: 8 GWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVF 67
+ + N A R M+E G++P V + LL+ +C + K + +A++ F
Sbjct: 147 AYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDK----------KHVNHAQEFF 196
Query: 68 DEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSC 127
+ + GI P ++SI++ ++R + + M E+ + Y++++ LC
Sbjct: 197 GKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKS 256
Query: 128 GRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHS 187
G ++ ++ EM G+ P A ++ F Y D + A K+ +MK L VPN+++
Sbjct: 257 GDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDL-VPNVYT 315
Query: 188 YNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMI 247
+N +I ++D + +++ G PD +Y ++ C+ + A + M
Sbjct: 316 FNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMD 375
Query: 248 EKGLLPQKVTFETLYRGLIQ 267
LP + T+ + + LI+
Sbjct: 376 RTKCLPDRHTYNMVLKLLIR 395
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 26/171 (15%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPS----ERFE 57
+ +I CK ++D A L EMI++G P+ TYN ++ C ++ + R +
Sbjct: 316 FNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMD 375
Query: 58 KT----------------IR-----NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH-QP 95
+T IR A ++++ M R P V ++++++H R +
Sbjct: 376 RTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKL 435
Query: 96 QLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVC 146
+ + M ++GI P T + L G+++ + L G+M R+ C
Sbjct: 436 EEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMERSSSC 486
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 151 bits (381), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 148/285 (51%), Gaps = 11/285 (3%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+T+LI+G N+ A + M++RG +PN+VTY V++NG+C+R I
Sbjct: 118 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD----------ID 167
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A + ++M IE DV F+ ++ + +L+ M+ KGI P V TYSS++
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
CLCS GR DA +LL +M+ + P+ T+N + A KL+ M + +
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI- 286
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P++ +YN LI F +R+D ++++ + PDLD+Y LI G C+ ++ ++ +
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 286
F EM +GL+ VT+ TL +GL +++ K++ + +
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 142/283 (50%), Gaps = 11/283 (3%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y+SLI C R A + L +MIE+ + PN+VT+N L++ + E
Sbjct: 223 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK----------EGKFV 272
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
AEK+ D+M R I+PD+ +++ +++ + + + FM K P + TY++++
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
K C R+ED EL EM G+ TY + D + A K+++QM DG+
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV- 391
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P++ +Y+IL+ +++ E+++ ++ S + D+ YT +I G+C+ K +
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 284
F + KG+ P VT+ T+ GL +L+ L KK+ E+
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 494
Score = 111 bits (277), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 138/279 (49%), Gaps = 17/279 (6%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y LI +C+ ++I +A LG+M++ G EP++VT + LLNG C K I
Sbjct: 48 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH----------GKRIS 97
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLH---VYSRAHQPQLSLDKLNFMKEKGICPTVATYS 118
+A + D+M G PD +F+ ++H ++++A + +D+ M ++G P + TY
Sbjct: 98 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDR---MVQRGCQPNLVTYG 154
Query: 119 SVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 178
VV LC G I+ A LL +M + +N + + A+ L+++M+
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 179 GLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKE 238
G+ PN+ +Y+ LI + R ++ +D+ + P+L ++ LI ++ K+ E
Sbjct: 215 GI-RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 239 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 277
A + +MI++ + P T+ +L G D L +++
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 135/300 (45%), Gaps = 18/300 (6%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+ L+ K+ + D+ LGE ++R G+ N+ TYN+L+N CRR+ I
Sbjct: 13 FNKLLSAIAKMKKFDLVIS-LGEKMQRLGISHNLYTYNILINCFCRRSQ----------I 61
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
A + +M G EP + + S +L+ Y + ++ ++ M E G P T++++
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
+ L + +A L+ MV+ G P+ TY R D + A L +M E
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAK 180
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
++ +N +I +D ++ +++ G+ P++ +Y+ LI LC +W +A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 241 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNY 295
Q +MIEK + P VTF L ++ +L K+ +D + T+ S +
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 99/191 (51%), Gaps = 11/191 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y +LI G+CK R++ EM RG+ + VTY L+ G+ H +
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL-----FHDGD-----CD 377
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
NA+KVF +M G+ PD+ ++SI+L + + +L+ ++M++ I + Y++++
Sbjct: 378 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
+ +C G+++D +L + GV P+ TYN ++ A L ++MKEDG
Sbjct: 438 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG-P 496
Query: 182 VPNMHSYNILI 192
+P+ +YN LI
Sbjct: 497 LPDSGTYNTLI 507
Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 10/176 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
YT+LI G D A++ +M+ GV P+++TY++LL+G+C L
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE---------- 412
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A +VFD M+ I+ D+ ++ ++ +A + D + KG+ P V TY++++
Sbjct: 413 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 177
LCS +++A LL +M +G P + TYN + + D + +L R+M+
Sbjct: 473 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Query: 140 MVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALN 199
MV++ PS +N K + + L +M+ G+ N+++YNILI F +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGIS-HNLYTYNILINCFCRRS 59
Query: 200 RMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 259
++ + + + G P + + + L++G C ++ +A +M+E G P +TF
Sbjct: 60 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 260 TLYRGL 265
TL GL
Sbjct: 120 TLIHGL 125
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 13/120 (10%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+YT++I G CK ++D + +GV+PNVVTYN +++G+C + + +
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK----------RLL 481
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
+ A + +M+ G PD +++ ++ + R S + ++E C V S++
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE---LIREMRSCRFVGDASTI 538
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 147/268 (54%), Gaps = 14/268 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y ++ GWC I R A L EM+ERG+ PN+ TYN +L G R IR
Sbjct: 198 YNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ----------IR 247
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
+A + F EM+ R E DV +++ V+H + A + + + + + M +G+ P+VATY++++
Sbjct: 248 HAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMI 307
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
+ LC +E+A + EMVR G P+ TYN + + + +L ++M+ +G C
Sbjct: 308 QVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEG-C 366
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKE--- 238
PN +YN++I + + ++ ++ + P+LD+Y +LI G+ +++ ++
Sbjct: 367 EPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVV 426
Query: 239 ACQYFVEMIEKGLLPQKVTFETLYRGLI 266
A + +EM+E+G +P+K TF + GL+
Sbjct: 427 AGKLLLEMVERGFIPRKFTFNRVLNGLL 454
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 108/234 (46%), Gaps = 4/234 (1%)
Query: 63 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVK 122
A K+F M G D+ SF+ +L V ++ + + + + ++ + TV TY+ ++
Sbjct: 145 AVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTV-TYNVILN 203
Query: 123 CLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCV 182
C R A E+L EMV G+ P+ TYN K + A + + +MK+ C
Sbjct: 204 GWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD-CE 262
Query: 183 PNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQY 242
++ +Y ++ F + R +++++ G+ P + +Y +I LC+K + A
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 243 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 296
F EM+ +G P T+ L RGL + L ++++ E FQ Y+
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCE--PNFQTYN 374
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 71/181 (39%), Gaps = 48/181 (26%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y ++I CK + ++ A EM+ RG EPNV TYNVL+ G+ H E
Sbjct: 303 YNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL-----FHAGE-----FS 352
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSL---------------DKLNF-- 104
E++ M G EP+ ++++++ YS + + +L D N
Sbjct: 353 RGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 412
Query: 105 ---------------------MKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRN 143
M E+G P T++ V+ L G A+E+L ++
Sbjct: 413 SGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKS 472
Query: 144 G 144
G
Sbjct: 473 G 473
>sp|Q9LN22|PPR54_ARATH Pentatricopeptide repeat-containing protein At1g20300,
mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2
SV=1
Length = 537
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 151/287 (52%), Gaps = 12/287 (4%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+YT+L+ GWC+ I AE+ EM G+EPNV TY+++++ +CR I
Sbjct: 257 VYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQ----------I 306
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
A VF +M G P+ +F+ ++ V+ +A + + L N MK+ G P TY+ +
Sbjct: 307 SRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFL 366
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
++ C +E+A ++L M++ +A T+N F+ ++D NGA ++Y +M E
Sbjct: 367 IEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMME-AK 425
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
C PN +YNIL+ MF+ DMV ++ ++ + P++++Y +L+ C W A
Sbjct: 426 CEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAY 485
Query: 241 QYFVEMI-EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 286
+ F EM+ EK L P +E + L ++ L+ L +K+ ++ +
Sbjct: 486 KLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 132/285 (46%), Gaps = 12/285 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+T LI + + A M + G P+ + ++++++ + R+ +
Sbjct: 189 FTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRK----------RRAS 238
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A+ FD ++ R EPDV ++ ++ + RA + + MK GI P V TYS V+
Sbjct: 239 EAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVI 297
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
LC CG+I A ++ +M+ +G P+A T+N + + +++Y QMK+ G C
Sbjct: 298 DALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLG-C 356
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P+ +YN LI ++ ++ N + + ++ + + +K+ A +
Sbjct: 357 EPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHR 416
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 286
+ +M+E P VT+ L R + S ++KK++D++ +
Sbjct: 417 MYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEV 461
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 146/285 (51%), Gaps = 11/285 (3%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+T+LI+G N+ A + M++RG +PN+VTY V++NG+C+R
Sbjct: 193 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL--------- 243
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A + ++M IE DV F+ ++ + +L+ M+ KGI P V TYSS++
Sbjct: 244 -ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
CLCS GR DA +LL +M+ + P+ T+N + A KLY M + +
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI- 361
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P++ +YN L+ F +R+D ++++ + PD+ +Y LI G C+ ++ ++ +
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 286
F EM +GL+ VT+ TL +GL +++ K++ + +
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Score = 137 bits (346), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 148/301 (49%), Gaps = 11/301 (3%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y+SLI C R A + L +MIE+ + PN+VT+N L++ + E
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK----------EGKFV 347
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
AEK++D+M R I+PD+ +++ +++ + + + FM K P V TY++++
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
K C R+ED EL EM G+ TY + D + A K+++QM DG+
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV- 466
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P++ +Y+IL+ +++ E+++ ++ S + D+ YT +I G+C+ K +
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKPYR 301
F + KG+ P VT+ T+ GL +L+ L KK+ E+ S N + +
Sbjct: 527 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHL 586
Query: 302 R 302
R
Sbjct: 587 R 587
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 135/302 (44%), Gaps = 46/302 (15%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y LI +C+ ++I +A LG+M++ G EP++VT + LLNG C K I
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH----------GKRIS 172
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLH-----------------VYSRAHQPQ-------- 96
+A + D+M G PD +F+ ++H + R QP
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 97 ----------LSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVC 146
L+L+ LN M+ I V +++++ LC ++DA L EM G+
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 147 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVRE 206
P+ TY+ + A +L M E + PN+ ++N LI F+ + +
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN-PNLVTFNALIDAFVKEGKFVEAEK 351
Query: 207 IWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 266
+++D+ + PD+ +Y L++G C + +A Q F M+ K P VT+ TL +G
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Query: 267 QS 268
+S
Sbjct: 412 KS 413
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 134/300 (44%), Gaps = 18/300 (6%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+ L+ K+ + D+ LGE ++R + + TYN+L+N CRR+ I
Sbjct: 88 FNKLLSAIAKMKKFDVVIS-LGEKMQRLEIVHGLYTYNILINCFCRRSQ----------I 136
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
A + +M G EP + + S +L+ Y + ++ ++ M E G P T++++
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
+ L + +A L+ MV+ G P+ TY R D + A+ L +M E
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM-EAAK 255
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
++ +N +I +D ++ +++ G+ P++ +Y+ LI LC +W +A
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 241 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNY 295
Q +MIEK + P VTF L ++ +L K+ +D + T+ S +
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 10/176 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
YT+LI G D A++ +M+ GV P+++TY++LL+G+C L
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE---------- 487
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A +VFD M+ I+ D+ ++ ++ +A + D + KG+ P V TY++++
Sbjct: 488 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 177
LCS +++A LL +M +G P++ TYN + + D + +L R+M+
Sbjct: 548 SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
Query: 129 RIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSY 188
+++DA L G MV++ PS +N K + + L +M+ + V +++Y
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEI-VHGLYTY 123
Query: 189 NILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 248
NILI F +++ + + + G P + + + L++G C ++ +A +M+E
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 249 KGLLPQKVTFETLYRGL 265
G P +TF TL GL
Sbjct: 184 MGYRPDTITFTTLIHGL 200
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 59/120 (49%), Gaps = 13/120 (10%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+YT++I G CK ++D + +GV+PNVVTYN +++G+C + + +
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK----------RLL 556
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
+ A + +M+ G P+ +++ ++ + R S + + M+ C V S++
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS---CRFVGDASTI 613
>sp|Q9LZP3|PP293_ARATH Pentatricopeptide repeat-containing protein At3g62470,
mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2
SV=1
Length = 599
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 141/250 (56%), Gaps = 11/250 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
YT L+ GWC++ + A R +MI++G++P++V +NV+L G+ R +
Sbjct: 301 YTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLR----------SRKKS 350
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
+A K+F M+ +G P+V S++I++ + + + +++ + M + G+ P A Y+ ++
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
+ +++ ELL EM G P +TYN K +K A ++Y +M ++ +
Sbjct: 411 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEI- 469
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P++H++N+++ + +M R +W ++ G+ PD +SYT+LI GL + K +EAC+
Sbjct: 470 EPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACR 529
Query: 242 YFVEMIEKGL 251
Y EM++KG+
Sbjct: 530 YLEEMLDKGM 539
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 8/232 (3%)
Query: 58 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH---QPQLSLDKLNFMKEKGICPTV 114
K + A +F+ M+ + V + + +L RA + Q+ DKL KE+ P +
Sbjct: 243 KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL---KER-FTPNM 298
Query: 115 ATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQ 174
TY+ ++ C + +A + +M+ G+ P +N + + + A+KL+
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHV 358
Query: 175 MKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQ 234
MK G C PN+ SY I+I F + M+ E ++D+ SGL PD YT LI G ++
Sbjct: 359 MKSKGPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK 417
Query: 235 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 286
K + EM EKG P T+ L + + M R+ K+ + I
Sbjct: 418 KLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEI 469
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 117/251 (46%), Gaps = 16/251 (6%)
Query: 34 VVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH 93
V T N LL+ + R K + A+ +FD+++ R P++ +++++L+ + R
Sbjct: 264 VETINCLLDSLGR----------AKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVR 312
Query: 94 QPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYN 153
+ N M ++G+ P + ++ +++ L + DA +L M G CP+ +Y
Sbjct: 313 NLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYT 372
Query: 154 CFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKG 213
+++ + A++ + M + GL P+ Y LI F ++D V E+ +++
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMVDSGL-QPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 431
Query: 214 SGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS---DM 270
G PD +Y LI + ++ + A + + +MI+ + P TF + + + +M
Sbjct: 432 KGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEM 491
Query: 271 LRT-WRRLKKK 280
R W + KK
Sbjct: 492 GRAVWEEMIKK 502
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+YT LI G+ ++D L EM E+G P+ TYN L+ + +K
Sbjct: 405 VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN----------QKMP 454
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
+A +++++M IEP + +F++++ Y A ++ M +KGICP +Y+ +
Sbjct: 455 EHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVL 514
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEY 159
++ L G+ +A L EM+ G+ YN F ++
Sbjct: 515 IRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADF 553
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 89/201 (44%), Gaps = 3/201 (1%)
Query: 73 RGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIED 132
+G D +++ ++ + ++ Q + + L M KG+ T+ T++ +K + +
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKK 247
Query: 133 AEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILI 192
A + M + ET NC K A L+ ++KE PNM +Y +L+
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER--FTPNMMTYTVLL 305
Query: 193 GMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 252
+ + + IWND+ GL PD+ ++ +++ GL +K +A + F M KG
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC 365
Query: 253 PQKVTFETLYRGLIQSDMLRT 273
P ++ + R + + T
Sbjct: 366 PNVRSYTIMIRDFCKQSSMET 386
>sp|Q9LEQ7|PP382_ARATH Pentatricopeptide repeat-containing protein At5g14820,
mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2
SV=1
Length = 598
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 142/250 (56%), Gaps = 11/250 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
YT L+ GWC++ + A R +MI+ G++P++V +NV+L G+ R S+ S
Sbjct: 300 YTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLR--SMKKS-------- 349
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
+A K+F M+ +G P+V S++I++ + + + +++ + M + G+ P A Y+ ++
Sbjct: 350 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 409
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
+ +++ ELL EM G P +TYN K +K ++Y +M ++ +
Sbjct: 410 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI- 468
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P++H++N+++ + +M R +W+++ G+ PD +SYT+LI GL + K +EAC+
Sbjct: 469 EPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACR 528
Query: 242 YFVEMIEKGL 251
Y EM++KG+
Sbjct: 529 YLEEMLDKGM 538
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 8/232 (3%)
Query: 58 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH---QPQLSLDKLNFMKEKGICPTV 114
K + A +F+ M+ + V + + +L RA + Q+ DKL KE+ P +
Sbjct: 242 KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL---KER-FTPNM 297
Query: 115 ATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQ 174
TY+ ++ C + +A + +M+ +G+ P +N + + A+KL+
Sbjct: 298 MTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHV 357
Query: 175 MKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQ 234
MK G C PN+ SY I+I F + M+ E ++D+ SGL PD YT LI G ++
Sbjct: 358 MKSKGPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK 416
Query: 235 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 286
K + EM EKG P T+ L + + M R+ K+ + I
Sbjct: 417 KLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 468
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 93/214 (43%), Gaps = 11/214 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
YT +I +CK + ++ A + +M++ G++P+ Y L+ G +K +
Sbjct: 370 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT----------QKKLD 419
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
++ EM+ +G PD +++ ++ + + P+ N M + I P++ T++ ++
Sbjct: 420 TVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIM 479
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
K E + EM++ G+CP +Y + + A + +M + G+
Sbjct: 480 KSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMK 539
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSG 215
P + YN F + ++ E+ K SG
Sbjct: 540 TP-LIDYNKFAADFHRGGQPEIFEELAQRAKFSG 572
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+YT LI G+ ++D L EM E+G P+ TYN L+ + +K
Sbjct: 404 VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN----------QKMP 453
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
+ +++++M IEP + +F++++ Y A ++ + M +KGICP +Y+ +
Sbjct: 454 EHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVL 513
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEY 159
++ L S G+ +A L EM+ G+ YN F ++
Sbjct: 514 IRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADF 552
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 88/201 (43%), Gaps = 3/201 (1%)
Query: 73 RGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIED 132
+G D +++ ++ + ++ Q + + L M KG+ T+ T++ +K + +
Sbjct: 188 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKK 246
Query: 133 AEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILI 192
A + M + ET NC K A L+ ++KE PNM +Y +L+
Sbjct: 247 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER--FTPNMMTYTVLL 304
Query: 193 GMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 252
+ + + IWND+ GL PD+ ++ +++ GL K +A + F M KG
Sbjct: 305 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 364
Query: 253 PQKVTFETLYRGLIQSDMLRT 273
P ++ + R + + T
Sbjct: 365 PNVRSYTIMIRDFCKQSSMET 385
>sp|Q3EAF8|PP294_ARATH Pentatricopeptide repeat-containing protein At3g62540,
mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2
SV=1
Length = 599
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 142/250 (56%), Gaps = 11/250 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
YT L+ GWC++ + A R +MI+ G++P++V +NV+L G+ R S+ S
Sbjct: 301 YTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLR--SMKKS-------- 350
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
+A K+F M+ +G P+V S++I++ + + + +++ + M + G+ P A Y+ ++
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
+ +++ ELL EM G P +TYN K +K ++Y +M ++ +
Sbjct: 411 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI- 469
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P++H++N+++ + +M R +W+++ G+ PD +SYT+LI GL + K +EAC+
Sbjct: 470 EPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACR 529
Query: 242 YFVEMIEKGL 251
Y EM++KG+
Sbjct: 530 YLEEMLDKGM 539
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 8/232 (3%)
Query: 58 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH---QPQLSLDKLNFMKEKGICPTV 114
K + A +F+ M+ + V + + +L RA + Q+ DKL KE+ P +
Sbjct: 243 KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL---KER-FTPNM 298
Query: 115 ATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQ 174
TY+ ++ C + +A + +M+ +G+ P +N + + A+KL+
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHV 358
Query: 175 MKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQ 234
MK G C PN+ SY I+I F + M+ E ++D+ SGL PD YT LI G ++
Sbjct: 359 MKSKGPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK 417
Query: 235 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 286
K + EM EKG P T+ L + + M R+ K+ + I
Sbjct: 418 KLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 469
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 93/214 (43%), Gaps = 11/214 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
YT +I +CK + ++ A + +M++ G++P+ Y L+ G +K +
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT----------QKKLD 420
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
++ EM+ +G PD +++ ++ + + P+ N M + I P++ T++ ++
Sbjct: 421 TVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIM 480
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
K E + EM++ G+CP +Y + + A + +M + G+
Sbjct: 481 KSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMK 540
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSG 215
P + YN F + ++ E+ K SG
Sbjct: 541 TP-LIDYNKFAADFHRGGQPEIFEELAQRAKFSG 573
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+YT LI G+ ++D L EM E+G P+ TYN L+ + +K
Sbjct: 405 VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN----------QKMP 454
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
+ +++++M IEP + +F++++ Y A ++ + M +KGICP +Y+ +
Sbjct: 455 EHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVL 514
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEY 159
++ L S G+ +A L EM+ G+ YN F ++
Sbjct: 515 IRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADF 553
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 87/201 (43%), Gaps = 3/201 (1%)
Query: 73 RGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIED 132
+G +++ ++ + ++ Q + + L M KG+ T+ T++ +K + +
Sbjct: 189 QGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKK 247
Query: 133 AEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILI 192
A + M + ET NC K A L+ ++KE PNM +Y +L+
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER--FTPNMMTYTVLL 305
Query: 193 GMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 252
+ + + IWND+ GL PD+ ++ +++ GL K +A + F M KG
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 365
Query: 253 PQKVTFETLYRGLIQSDMLRT 273
P ++ + R + + T
Sbjct: 366 PNVRSYTIMIRDFCKQSSMET 386
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 141 bits (356), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 143/267 (53%), Gaps = 11/267 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+T+LI+G N+ A + +M++RG +P++VTY ++NG+C+R I
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD----------ID 240
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A + ++M I+ +V F+ ++ + ++++D M+ KGI P V TY+S++
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
CLC+ GR DA LL M+ + P+ T+N + A KL+ +M + +
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI- 359
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P+ +YN+LI F NR+D ++++ + P++ +Y LI+G C+ ++ ++ +
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQS 268
F EM ++GL+ VT+ T+ +G Q+
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQA 446
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 140/284 (49%), Gaps = 16/284 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y SLI C R A R L M+E+ + PNVVT+N L++ + E +
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFK----------EGKLV 345
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
AEK+ +EM R I+PD +++++++ + ++ + FM K P + TY++++
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
C C R+ED EL EM + G+ + TY + + D + A +++QM +
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR-- 463
Query: 182 VP-NMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
VP ++ +Y+IL+ + ++D I+ ++ S + ++ Y +I G+C+ K EA
Sbjct: 464 VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAW 523
Query: 241 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 284
F + K P VT+ T+ GL +L+ L +K+ E+
Sbjct: 524 DLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKED 564
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 133/284 (46%), Gaps = 16/284 (5%)
Query: 12 INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMR 71
I ++D A G+M++ P++V +N LL+ V + +FE I E +M+
Sbjct: 61 IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKM------NKFELVISLGE----QMQ 110
Query: 72 VRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIE 131
GI D+ ++SI ++ + R Q L+L L M + G P + T SS++ C RI
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 132 DAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNIL 191
DA L+ +MV G P T+ A+ A+ L QM + G C P++ +Y +
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTV 229
Query: 192 IGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 251
+ +D+ + N ++ + + ++ + +I LC+ + + A F EM KG+
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Query: 252 LPQKVTFETLYRGLIQ----SDMLRTWRR-LKKKLDEESITFGS 290
P VT+ +L L SD R L+KK++ +TF +
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 135/292 (46%), Gaps = 16/292 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+ L+ K+N+ ++ +M G+ ++ TY++ +N CRR+ L
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSL--------- 136
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A V +M G EPD+ + S +L+ Y + + ++ ++ M E G P T+++++
Sbjct: 137 -ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
L + +A L+ +MV+ G P TY R D + A+ L +M E
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM-EAARI 254
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
N+ +N +I +++ +++ +++ G+ P++ +Y LI+ LC +W +A +
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASR 314
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITF 288
M+EK + P VTF L + L +L ++ +D ++IT+
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 102/237 (43%), Gaps = 59/237 (24%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--------------- 46
Y LI G+C NR+D A++ M+ + PN+ TYN L+NG C+
Sbjct: 366 YNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMS 425
Query: 47 -RASLHPSERFEKTIR---------NAEKVFDEMRVRGIEPDVTSFSIVLH--------- 87
R + + + I+ +A+ VF +M + D+ ++SI+LH
Sbjct: 426 QRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLD 485
Query: 88 ------VYSRAHQPQLSLDKLNFMKEKGIC------------------PTVATYSSVVKC 123
Y + + +L++ N M E G+C P V TY++++
Sbjct: 486 TALVIFKYLQKSEMELNIFIYNTMIE-GMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISG 544
Query: 124 LCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
LCS +++A++L +M +G P++ TYN + D + +L ++M+ G
Sbjct: 545 LCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGF 601
Score = 38.5 bits (88), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y ++I G C + A+ +M E G PN TYN L+ RA+L +R
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI-----RANLRDCDR-----A 587
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMK 106
+ ++ EMR G D ++ S+V ++ H +L LN +
Sbjct: 588 ASAELIKEMRSSGFVGDASTISLVTNML---HDGRLDKSFLNMLS 629
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 140/273 (51%), Gaps = 17/273 (6%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+++LI + K ++ A+ EMI RG+ P+ +TYN L++G C+ LH
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH---------- 367
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A ++FD M +G EPD+ ++SI+++ Y +A + + + KG+ P TY+++V
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
C G++ A+EL EMV GV PS TY + N A++++ +M++ +
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
+ + YNI+I +++D ++ + G+ PD+ +Y ++I GLC+K EA
Sbjct: 488 L-GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546
Query: 242 YFVEMIEKGLLPQKVTFETLYR------GLIQS 268
F +M E G P T+ L R GLI S
Sbjct: 547 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 579
Score = 120 bits (302), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 145/317 (45%), Gaps = 26/317 (8%)
Query: 3 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-SLHPSERFEK--- 58
++LI G C R+ A + M+E G +P+ VTY +LN +C+ S + F K
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 238
Query: 59 ---------------------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQL 97
+ +A +F+EM ++GI+ DV ++S ++ +
Sbjct: 239 RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 298
Query: 98 SLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFK 157
L M + I P V T+S+++ G++ +A+EL EM+ G+ P TYN
Sbjct: 299 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358
Query: 158 EYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLG 217
+ + A +++ M G C P++ +Y+ILI + R+D ++ ++ GL
Sbjct: 359 GFCKENCLHEANQMFDLMVSKG-CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI 417
Query: 218 PDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 277
P+ +Y L+ G C+ K A + F EM+ +G+ P VT+ L GL + L +
Sbjct: 418 PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEI 477
Query: 278 KKKLDEESITFGSEFQN 294
+K+ + +T G N
Sbjct: 478 FEKMQKSRMTLGIGIYN 494
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 141/294 (47%), Gaps = 16/294 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+++L+ G+C R+ A + M+E P++VT + L+NG+C + +
Sbjct: 143 FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR----------VS 192
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A + D M G +PD ++ VL+ ++ L+LD M+E+ I +V YS V+
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
LC G +DA L EM G+ TY+ + K+ R+M +
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI- 311
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
+P++ +++ LI +F+ ++ +E++N++ G+ PD +Y LI G C++ EA Q
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 371
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKKK-LDEESITFGS 290
F M+ KG P VT+ L ++ D +R +R + K L +IT+ +
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 120/247 (48%), Gaps = 15/247 (6%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y+ LI +CK R+D R E+ +G+ PN +TYN L+ G C+ L+
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA--------- 438
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A+++F EM RG+ P V ++ I+L + +L+ M++ + + Y+ ++
Sbjct: 439 -AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
+C+ +++DA L + GV P TYN + + A L+R+MKEDG C
Sbjct: 498 HGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG-C 556
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P+ +YNILI + + + E+ ++K G D + M+I L +++ K
Sbjct: 557 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKS--- 613
Query: 242 YFVEMIE 248
F++M+
Sbjct: 614 -FLDMLS 619
Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 135/302 (44%), Gaps = 22/302 (7%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+ L + + D+ F M G+E ++ T +++N CR+ K +
Sbjct: 73 FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRK----------KKLL 122
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVY---SRAHQPQLSLDKLNFMKEKGICPTVATYS 118
A V G EPD +FS +++ + R + +D++ MK++ P + T S
Sbjct: 123 FAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR---PDLVTVS 179
Query: 119 SVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 178
+++ LC GR+ +A L+ MV G P TY ++ A+ L+R+M+E
Sbjct: 180 TLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER 239
Query: 179 GLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKE 238
+ ++ Y+I+I D ++N+++ G+ D+ +Y+ LI GLC KW +
Sbjct: 240 NI-KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 298
Query: 239 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQ 293
+ EMI + ++P VTF L ++ L + L + + ++IT+ S
Sbjct: 299 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358
Query: 294 NY 295
+
Sbjct: 359 GF 360
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 15/121 (12%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+Y +I+G C +++D A + ++GV+P+VVTYNV++ G+C++ SL
Sbjct: 492 IYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS--------- 542
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSL-DKLNFMKEKGICPTVATYSS 119
A+ +F +M+ G PD +++I++ RAH L + ++E +C A S+
Sbjct: 543 -EADMLFRKMKEDGCTPDDFTYNILI----RAHLGGSGLISSVELIEEMKVCGFSADSST 597
Query: 120 V 120
+
Sbjct: 598 I 598
>sp|Q6NKW7|PP164_ARATH Pentatricopeptide repeat-containing protein At2g19280
OS=Arabidopsis thaliana GN=At2g19280 PE=2 SV=2
Length = 693
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 138/264 (52%), Gaps = 11/264 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
YT++I G+C + R D A ++ G +++ G P++ T +L+ G C R +I
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILI-GACSRFG---------SIS 460
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
+AE VF M+ G++ DV +++ ++H Y + HQ + ++ M+ GI P VATY+ ++
Sbjct: 461 DAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI 520
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
+ G I++A E++ E++R G PS + + R D A L+ M D
Sbjct: 521 HSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMA-DLRM 579
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P++ + + L+ + RM+ ++N + +GL PD+ Y LIHG C ++AC+
Sbjct: 580 KPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACE 639
Query: 242 YFVEMIEKGLLPQKVTFETLYRGL 265
M+++G+LP + T L GL
Sbjct: 640 LIGLMVQRGMLPNESTHHALVLGL 663
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 117/294 (39%), Gaps = 49/294 (16%)
Query: 6 IYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEK 65
I G+CK+ + + A + + R PN+ Y+ L+ +C + A
Sbjct: 348 IDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDM----------LRAST 394
Query: 66 VFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLC 125
+F E+ G+ PD ++ ++ Y + + + + G P++ T + ++
Sbjct: 395 IFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACS 454
Query: 126 SCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNM 185
G I DAE + M G+ TYN Y N +L +M+ G+ P++
Sbjct: 455 RFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGIS-PDV 513
Query: 186 HSYNILIGMFMALNRMDMVREI---------------WNDVKGS---------------- 214
+YNILI + +D EI + DV G
Sbjct: 514 ATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFY 573
Query: 215 ----GLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 264
+ PD+ + + L+HG C+ Q+ ++A F ++++ GL P V + TL G
Sbjct: 574 MADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 25/190 (13%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL-HPSERFEKTI 60
Y +L++G+ K ++++ + EM G+ P+V TYN+L++ + R + +E + I
Sbjct: 481 YNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELI 540
Query: 61 RNA--------EKVFDEMRVRG----------------IEPDVTSFSIVLHVYSRAHQPQ 96
R V RG ++PDV + S +LH Y +A + +
Sbjct: 541 RRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRME 600
Query: 97 LSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFF 156
++ N + + G+ P V Y++++ CS G IE A EL+G MV+ G+ P+ T++
Sbjct: 601 KAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Query: 157 KEYRGRKDAN 166
G++ N
Sbjct: 661 LGLEGKRFVN 670
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 128/329 (38%), Gaps = 78/329 (23%)
Query: 4 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNA 63
SL+ +++ +++A F+ M+ RG N ++ + C F+K
Sbjct: 241 SLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDG------YFDK----G 290
Query: 64 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGIC------------ 111
++ M+ GI PD+ +F++ + +A + + L +K GI
Sbjct: 291 WELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDG 350
Query: 112 --------------------PTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAET 151
P + YSS + +CS G + A + E+ G+ P
Sbjct: 351 FCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVC 410
Query: 152 YNCFFKEY--RGRKD---------------------------------ANGAMKLYRQMK 176
Y Y GR D + A ++R MK
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 177 EDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKW 236
+GL + ++ +YN L+ + ++++ V E+ ++++ +G+ PD+ +Y +LIH + +
Sbjct: 471 TEGLKL-DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYI 529
Query: 237 KEACQYFVEMIEKGLLPQKVTFETLYRGL 265
EA + E+I +G +P + F + G
Sbjct: 530 DEANEIISELIRRGFVPSTLAFTDVIGGF 558
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 112/276 (40%), Gaps = 38/276 (13%)
Query: 57 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVAT 116
E+ + A K+ ++ GI P +L R H +L+ + + M +G A
Sbjct: 214 ERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAV 273
Query: 117 YSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGR---KDANGA---MK 170
S ++ CS G + ELL M G+ P + F + K+A +K
Sbjct: 274 LSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK 333
Query: 171 LYRQMKE--------DGLC--------VPNMHSYNILIGMFMALNRM-------DMVRE- 206
L+ ++ DG C + +HS+ + +F+ + + DM+R
Sbjct: 334 LFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRAS 393
Query: 207 -IWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 265
I+ ++ GL PD YT +I G C + +A QYF +++ G P +T T+ G
Sbjct: 394 TIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG-NPPSLTTSTILIGA 452
Query: 266 IQ-----SDMLRTWRRLKKK-LDEESITFGSEFQNY 295
SD +R +K + L + +T+ + Y
Sbjct: 453 CSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY 488
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+Y +LI+G+C + I+ A +G M++RG+ PN T++ L+ G+ +RF +
Sbjct: 620 LYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL-------EGKRFVNSE 672
Query: 61 RNAEKVFDEMRV 72
+A + +E+ V
Sbjct: 673 THASMLLEEIIV 684
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 138/267 (51%), Gaps = 11/267 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+T+LI+G N+ A + M++RG +PN+VTY V++NG+C+R I
Sbjct: 193 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD----------ID 242
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A + ++M IE +V +S V+ + +L+ M+ KG+ P V TYSS++
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
CLC+ R DA LL +M+ + P+ T+N + A KLY +M + +
Sbjct: 303 SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI- 361
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P++ +Y+ LI F +R+D + ++ + P++ +Y LI+G C+ ++ E +
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQS 268
F EM ++GL+ VT+ TL G Q+
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQA 448
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 140/283 (49%), Gaps = 11/283 (3%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y+SLI C R A R L +MIER + PNVVT+N L++ + E +
Sbjct: 298 YSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK----------EGKLV 347
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
AEK++DEM R I+PD+ ++S +++ + + + M K P V TY++++
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
C RI++ EL EM + G+ + TY + +D + A +++QM DG+
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
PN+ +YN L+ +++ ++ ++ S + P + +Y ++I G+C+ K ++
Sbjct: 468 -PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 526
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 284
F + KG+ P + + T+ G + + L +K+ E+
Sbjct: 527 LFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 134/292 (45%), Gaps = 26/292 (8%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSE------- 54
Y LI +C+ ++I +A LG+M++ G EP++VT + LLNG C + +
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 55 ---------RFEKTIRN---------AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQ 96
F I A + D M RG +P++ ++ +V++ +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242
Query: 97 LSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFF 156
L+ + LN M+ I V YS+V+ LC +DA L EM GV P+ TY+
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 157 KEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGL 216
+ + A +L M E + PN+ ++N LI F+ ++ ++++++ +
Sbjct: 303 SCLCNYERWSDASRLLSDMIERKIN-PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 217 GPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 268
PD+ +Y+ LI+G C + EA F MI K P VT+ TL G ++
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 136/300 (45%), Gaps = 18/300 (6%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+ L+ K+ + D+ LGE ++R G+ N+ TYN+L+N CRR+ I
Sbjct: 88 FNKLLSAIAKMKKFDLVIS-LGEKMQRLGISHNLYTYNILINCFCRRSQ----------I 136
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
A + +M G EP + + S +L+ Y + ++ ++ M E G P T++++
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
+ L + +A L+ MV+ G P+ TY R D + A L +M E
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAK 255
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
N+ Y+ +I D ++ +++ G+ P++ +Y+ LI LC ++W +A
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 241 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNY 295
+ +MIE+ + P VTF L ++ L +L K+ +D + T+ S +
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 25/203 (12%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--------------- 46
Y+SLI G+C +R+D A+ MI + PNVVTYN L+NG C+
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS 427
Query: 47 -RASLHPSERFEKTIR---------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQ 96
R + + + I NA+ VF +M G+ P++ +++ +L + + +
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487
Query: 97 LSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFF 156
++ +++ + PT+ TY+ +++ +C G++ED +L + GV P YN
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Query: 157 KEYRGRKDANGAMKLYRQMKEDG 179
+ + A L+R+M+EDG
Sbjct: 548 SGFCRKGLKEEADALFRKMREDG 570
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 10/150 (6%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
YT+LI+G+ + D A+ +M+ GV PN++TYN LL+G+C+ L
Sbjct: 438 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE---------- 487
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A VF+ ++ +EP + +++I++ +A + + D + KG+ P V Y++++
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAET 151
C G E+A+ L +M +G P + T
Sbjct: 548 SGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Query: 129 RIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSY 188
+++DA L G MV++ PS +N K + + L +M+ G+ N+++Y
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGIS-HNLYTY 123
Query: 189 NILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 248
NILI F +++ + + + G P + + + L++G C ++ +A +M+E
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 249 KGLLPQKVTFETLYRGL 265
G P +TF TL GL
Sbjct: 184 MGYRPDTITFTTLIHGL 200
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 149/286 (52%), Gaps = 12/286 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y +LI G+CK A EM+ G+ P+V+TY L++ +C+ +++ + F
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF----- 367
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
D+MRVRG+ P+ +++ ++ +S+ + L M + G P+V TY++++
Sbjct: 368 -----LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
C G++EDA +L +M G+ P +Y+ + D + A+++ R+M E G+
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI- 481
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P+ +Y+ LI F R +++ ++ GL PD +YT LI+ C + ++A Q
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL-DEESI 286
EM+EKG+LP VT+ L GL + R +RL KL EES+
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587
Score = 124 bits (311), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 141/321 (43%), Gaps = 51/321 (15%)
Query: 15 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMRVRG 74
I AE EM+E V PNV TYN+L+ G C F I A +FD+M +G
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFC----------FAGNIDVALTLFDKMETKG 235
Query: 75 IEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAE 134
P+V +++ ++ Y + + L M KG+ P + +Y+ V+ LC GR+++
Sbjct: 236 CLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVS 295
Query: 135 ELL-----------------------------------GEMVRNGVCPSAETYNCFFKEY 159
+L EM+R+G+ PS TY
Sbjct: 296 FVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSM 355
Query: 160 RGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPD 219
+ N AM+ QM+ GLC PN +Y L+ F M+ + ++ +G P
Sbjct: 356 CKAGNMNRAMEFLDQMRVRGLC-PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 414
Query: 220 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWR 275
+ +Y LI+G C K ++A +M EKGL P V++ T+ G +S + LR R
Sbjct: 415 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 276 RL-KKKLDEESITFGSEFQNY 295
+ +K + ++IT+ S Q +
Sbjct: 475 EMVEKGIKPDTITYSSLIQGF 495
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 141/298 (47%), Gaps = 32/298 (10%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
YT+L+ G+ + ++ A R L EM + G P+VVTYN L+NG C +
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM----------E 432
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
+A V ++M+ +G+ PDV S+S VL + R++ +L M EKGI P TYSS++
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
+ C R ++A +L EM+R G+ P TY Y D A++L+ +M E G+
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV- 551
Query: 182 VPNMHSYNILIGMFMALNRMDMVRE-------------IWNDVKGSGL-----GPDLDSY 223
+P++ +Y++LI LN+ RE + +DV L + S
Sbjct: 552 LPDVVTYSVLIN---GLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSV 608
Query: 224 TMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 281
LI G C K EA Q F M+ K P + + G ++ +R L K++
Sbjct: 609 VSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 131/292 (44%), Gaps = 28/292 (9%)
Query: 5 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAE 64
++ + +++ ID A + G P V++YN +L+ R ++ I AE
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRS---------KRNISFAE 190
Query: 65 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCL 124
VF EM + P+V +++I++ + A ++L + M+ KG P V TY++++
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250
Query: 125 CSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPN 184
C +I+D +LL M G+ P+ +YN NG + R MKE +
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVI---------NGLCREGR-MKEVSFVLTE 300
Query: 185 MH---------SYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQK 235
M+ +YN LI + + ++ GL P + +YT LIH +C+
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360
Query: 236 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 287
A ++ +M +GL P + T+ TL G Q + R+ +++++ +
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFS 412
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 98/223 (43%), Gaps = 41/223 (18%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSER------ 55
YT+LI +C ++ A + EM+E+GV P+VVTY+VL+NG+ +++ ++R
Sbjct: 523 YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Query: 56 ----------FEKTIRN------------------------AEKVFDEMRVRGIEPDVTS 81
+ I N A++VF+ M + +PD T+
Sbjct: 583 YEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTA 642
Query: 82 FSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMV 141
++I++H + RA + + M + G T ++VK L G++ + ++ ++
Sbjct: 643 YNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVL 702
Query: 142 RNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPN 184
R+ AE + + + + + +M +DG +PN
Sbjct: 703 RSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGF-LPN 744
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 137 bits (345), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 151/297 (50%), Gaps = 22/297 (7%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y +++ C ++ A L M++R P+V+TY +L+ CR + +
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR----------DSGVG 256
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
+A K+ DEMR RG PDV +++++++ + + ++ LN M G P V T++ ++
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANG-AMKLYRQMKEDGL 180
+ +CS GR DAE+LL +M+R G PS T+N + RK G A+ + +M + G
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI-NFLCRKGLLGRAIDILEKMPQHG- 374
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
C PN SYN L+ F +MD E + G PD+ +Y ++ LC+ K ++A
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434
Query: 241 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK-------KKLDEESITFGS 290
+ ++ KG P +T+ T+ GL ++ +T + +K K L ++IT+ S
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAG--KTGKAIKLLDEMRAKDLKPDTITYSS 489
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 26/292 (8%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI- 60
YT LI C+ + + A + L EM +RG P+VVTYNVL+NG+C+ L + +F +
Sbjct: 242 YTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMP 301
Query: 61 ------------------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQ 96
+AEK+ +M +G P V +F+I+++ R
Sbjct: 302 SSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLG 361
Query: 97 LSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFF 156
++D L M + G P +Y+ ++ C +++ A E L MV G P TYN
Sbjct: 362 RAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTML 421
Query: 157 KEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGL 216
A+++ Q+ G C P + +YN +I + ++ ++++ L
Sbjct: 422 TALCKDGKVEDAVEILNQLSSKG-CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480
Query: 217 GPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 268
PD +Y+ L+ GL + K EA ++F E G+ P VTF ++ GL +S
Sbjct: 481 KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKS 532
Score = 120 bits (302), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 137/277 (49%), Gaps = 11/277 (3%)
Query: 5 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAE 64
++ C R AE+ L +M+ +G P+VVT+N+L+N +CR+ L A
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLG----------RAI 364
Query: 65 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCL 124
+ ++M G +P+ S++ +LH + + + +++ L M +G P + TY++++ L
Sbjct: 365 DILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Query: 125 CSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPN 184
C G++EDA E+L ++ G P TYN A+KL +M+ L P+
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL-KPD 483
Query: 185 MHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFV 244
+Y+ L+G ++D + +++ + G+ P+ ++ ++ GLC+ ++ A + V
Sbjct: 484 TITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLV 543
Query: 245 EMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 281
MI +G P + ++ L GL M + L +L
Sbjct: 544 FMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 126/252 (50%), Gaps = 14/252 (5%)
Query: 20 RFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMRVRGIEPDV 79
+FL M+ G P+++ L+ G CR KT R A K+ + + G PDV
Sbjct: 123 KFLENMVYHGNVPDIIPCTTLIRGFCR---------LGKT-RKAAKILEILEGSGAVPDV 172
Query: 80 TSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGE 139
++++++ Y +A + +L L+ M + P V TY+++++ LC G+++ A E+L
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 140 MVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALN 199
M++ P TY + AMKL +M++ G C P++ +YN+L+
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG-CTPDVVTYNVLVNGICKEG 288
Query: 200 RMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 259
R+D + ND+ SG P++ ++ +++ +C +W +A + +M+ KG P VTF
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 260 TLYRGLIQSDML 271
L L + +L
Sbjct: 349 ILINFLCRKGLL 360
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 137 bits (345), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 149/277 (53%), Gaps = 11/277 (3%)
Query: 5 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAE 64
L+ +C+ +++ +A FLG+MI+ G EP++VT+ LLNG CR ++ +A
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY----------DAL 171
Query: 65 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCL 124
+FD+M G +P+V ++ ++ ++ Q +LD LN M++ GI P V TY+S++ L
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 125 CSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPN 184
CS GR DA ++ M + + P T+N + A + Y +M L P+
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL-DPD 290
Query: 185 MHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFV 244
+ +Y++LI +R+D E++ + G PD+ +Y++LI+G C+ +K + + F
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 245 EMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 281
EM ++G++ VT+ L +G ++ L + +++
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 154/314 (49%), Gaps = 32/314 (10%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERF---- 56
+Y ++I G CK ++D A L M + G+ P+VVTYN L++G+C + R
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM 247
Query: 57 ---------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH---VYSRA 92
E + AE+ ++EM R ++PD+ ++S++++ +YSR
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRL 307
Query: 93 HQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETY 152
+ + + FM KG P V TYS ++ C ++E +L EM + GV + TY
Sbjct: 308 DEAE---EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Query: 153 NCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVK 212
+ Y N A +++R+M G+ PN+ +YN+L+ +++ I D++
Sbjct: 365 TILIQGYCRAGKLNVAEEIFRRMVFCGV-HPNIITYNVLLHGLCDNGKIEKALVILADMQ 423
Query: 213 GSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 272
+G+ D+ +Y ++I G+C+ + +A + + +GL+P T+ T+ GL + + R
Sbjct: 424 KNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRR 483
Query: 273 TWRRLKKKLDEESI 286
L +K+ E+ I
Sbjct: 484 EADALFRKMKEDGI 497
Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 134/255 (52%), Gaps = 13/255 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+ +LI K R+ AE F EMI R ++P++VTY++L+ G+C + L
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD---------- 308
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
AE++F M +G PDV ++SI+++ Y ++ + + + M ++G+ TY+ ++
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
+ C G++ AEE+ MV GV P+ TYN A+ + M+++G+
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM- 427
Query: 182 VPNMHSYNILI-GMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
++ +YNI+I GM A D +I+ + GL PD+ +YT ++ GL +K +EA
Sbjct: 428 DADIVTYNIIIRGMCKAGEVAD-AWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREAD 486
Query: 241 QYFVEMIEKGLLPQK 255
F +M E G+LP +
Sbjct: 487 ALFRKMKEDGILPNE 501
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 146/333 (43%), Gaps = 49/333 (14%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y ++ + ++D + M++ P++ ++ LL+ + + ++++ I
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKM------KKYDVVIY 102
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
++++M++ GI ++ + +I+L+ + R Q L+L L M + G P++ T+ S++
Sbjct: 103 ----LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKED--- 178
C R+ DA + +MV G P+ YN K + A+ L +M++D
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218
Query: 179 -----------GLC--------------------VPNMHSYNILIGMFMALNRMDMVREI 207
GLC P++ ++N LI + R+ E
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 208 WNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 267
+ ++ L PD+ +Y++LI+GLC + EA + F M+ KG P VT+ L G +
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 268 SDMLRTWRRL-----KKKLDEESITFGSEFQNY 295
S + +L ++ + ++T+ Q Y
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 137/267 (51%), Gaps = 11/267 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+T+L++G + N+ A + M+ +G +P++VTY ++NG+C+R P
Sbjct: 173 FTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG--EPDL------- 223
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A + ++M IE DV +S V+ + +L+ M KGI P V TYSS++
Sbjct: 224 -ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
CLC+ GR DA LL +M+ + P+ T+N + A KL+ +M + +
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI- 341
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
PN+ +YN LI F +R+D ++I+ + PD+ +Y LI+G C+ +K + +
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQS 268
F +M +GL+ VT+ TL G Q+
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 137/287 (47%), Gaps = 22/287 (7%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y+SLI C R A R L +M+ER + PNVVT+N L++ + E +
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK----------EGKLI 327
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
AEK+FDEM R I+P++ +++ +++ + + + M K P V TY++++
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
C ++ D EL +M R G+ + TY + D + A +++QM DG+
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
PN+ +YN L+ +++ ++ ++ S + PD+ +Y ++ G+C+ K ++
Sbjct: 448 -PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWD 506
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITF 288
F + KG+ P + + T+ G KK L EE+ T
Sbjct: 507 LFCSLSLKGVKPDVIAYNTMISGFC-----------KKGLKEEAYTL 542
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 128/276 (46%), Gaps = 11/276 (3%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y +I C+ +++ A LG+M++ G P++VT N LLNG C I
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCH----------GNRIS 152
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A + D+M G +PD +F+ ++H + ++ ++ + M KG P + TY +V+
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
LC G + A LL +M + + Y+ + + A+ L+ +M G+
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI- 271
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P++ +Y+ LI R + +D+ + P++ ++ LI ++ K EA +
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 277
F EMI++ + P VT+ +L G D L +++
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 134/299 (44%), Gaps = 16/299 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
++ L+ K+ + D+ F +M GV N+ TYN+++N +CRR+ L
Sbjct: 68 FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQL----------S 117
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A + +M G P + + + +L+ + ++ ++ ++ M E G P T++++V
Sbjct: 118 FALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLV 177
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
L + +A L+ MV G P TY R + + A+ L +M E G
Sbjct: 178 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKI 236
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
++ Y+ +I +D ++ ++ G+ PD+ +Y+ LI LC +W +A +
Sbjct: 237 EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 296
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNY 295
+M+E+ + P VTF +L + L +L ++ +D +T+ S +
Sbjct: 297 LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 130/282 (46%), Gaps = 16/282 (5%)
Query: 14 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMRVR 73
++D A GEM++ P++V ++ LL+ + + ++F+ I EK M +
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKM------KKFDLVISFGEK----MEIL 94
Query: 74 GIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDA 133
G+ ++ +++I+++ R Q +L L M + G P++ T +S++ C RI +A
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 134 EELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIG 193
L+ +MV G P T+ A+ A+ L +M G C P++ +Y +I
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVIN 213
Query: 194 MFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 253
D+ + N ++ + D+ Y+ +I LC+ + +A F EM KG+ P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 254 QKVTFETLYRGLIQ----SDMLRTWRR-LKKKLDEESITFGS 290
T+ +L L SD R L++K++ +TF S
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNS 315
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC---------------- 45
Y SLI G+C +R+D A++ M+ + P+VVTYN L+NG C
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Query: 46 RRASLHPSERFEKTIR---------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQ 96
RR + + + I NA+ VF +M G+ P++ +++ +L + + +
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 467
Query: 97 LSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFF 156
++ ++++ + P + TY+ + + +C G++ED +L + GV P YN
Sbjct: 468 KAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMI 527
Query: 157 KEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILI 192
+ + A L+ +MKEDG +P+ +YN LI
Sbjct: 528 SGFCKKGLKEEAYTLFIKMKEDG-PLPDSGTYNTLI 562
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 75/190 (39%), Gaps = 61/190 (32%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPS----ERFE 57
YT+LI+G+ + + D A+ +M+ GV PN++TYN LL+G+C+ L + E +
Sbjct: 418 YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 477
Query: 58 KT---------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQ 96
K+ + + +F + ++G++PDV +++ ++ + + +
Sbjct: 478 KSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKE 537
Query: 97 LSLDKLNFMKEKGICPTVATYSS-----------------------------------VV 121
+ MKE G P TY++ V
Sbjct: 538 EAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVT 597
Query: 122 KCLCSCGRIE 131
L GR++
Sbjct: 598 DMLHD-GRLD 606
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 138/267 (51%), Gaps = 11/267 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+T+LI+G N+ A + M++RG +P++VTY ++NG+C+R
Sbjct: 186 FTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDL--------- 236
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A + ++M IE +V +S V+ + +L+ M+ KG+ P V TYSS++
Sbjct: 237 -ALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 295
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
CLC+ GR DA LL +M+ + P+ T++ + + A KLY +M + +
Sbjct: 296 SCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI- 354
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
PN+ +Y+ LI F L+R+ +++ + P++ +Y LI+G C+ ++ + +
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQS 268
F EM ++GL+ VT+ TL G Q+
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQA 441
Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 124/243 (51%), Gaps = 11/243 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y+SLI C R A R L +MIER + PN+VT++ L++ ++ L
Sbjct: 291 YSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL----------V 340
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
AEK+++EM R I+P++ ++S +++ + + + L M K P V TY++++
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
C R++ EL EM + G+ + TY + +D + A +++QM G+
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
PN+ +YNIL+ ++ ++ ++ S + PD+ +Y ++I G+C+ KWK
Sbjct: 461 -PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGI 519
Query: 242 YFV 244
YFV
Sbjct: 520 YFV 522
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 128/265 (48%), Gaps = 11/265 (4%)
Query: 4 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNA 63
SL+ G+C NRI A + +M+E G +P+ VT+ L++G+ LH A
Sbjct: 153 SLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGL----FLHNKAS------EA 202
Query: 64 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKC 123
+ D M RG +PD+ ++ V++ + L+L+ LN M+ I V YS+V+
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 124 LCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVP 183
LC +DA L EM GV P+ TY+ + A +L M E + P
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN-P 321
Query: 184 NMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYF 243
N+ +++ LI F+ ++ +++ ++ + P++ +Y+ LI+G C + EA Q
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381
Query: 244 VEMIEKGLLPQKVTFETLYRGLIQS 268
MI K LP VT+ TL G ++
Sbjct: 382 ELMIRKDCLPNVVTYNTLINGFCKA 406
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 133/299 (44%), Gaps = 16/299 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
++ L+ K+N+ D+ F +M G+ N+ TYN+L+N CR + L +
Sbjct: 81 FSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALL---- 136
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
+M G EPD+ + + +L+ + ++ ++ ++ M E G P T+++++
Sbjct: 137 ------GKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLI 190
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
L + +A L+ MV+ G P TY R D + A+ L +M E
Sbjct: 191 HGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM-EAAKI 249
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
N+ Y+ +I D ++ +++ G+ P++ +Y+ LI LC +W +A +
Sbjct: 250 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASR 309
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNY 295
+MIE+ + P VTF L ++ L +L K+ +D T+ S +
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 101/254 (39%), Gaps = 41/254 (16%)
Query: 77 PDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSC--------- 127
P + FS +L ++ ++ L + M+ GI + TY+ ++ C C C
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 128 --------------------------GRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRG 161
RI DA L+ +MV G P T+
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 162 RKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLD 221
A+ A+ L +M + G C P++ +Y ++ D+ + N ++ + + ++
Sbjct: 196 HNKASEAVALIDRMVQRG-CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVV 254
Query: 222 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWR-R 276
Y+ +I LC+ + +A F EM KG+ P +T+ +L L SD R
Sbjct: 255 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM 314
Query: 277 LKKKLDEESITFGS 290
+++K++ +TF +
Sbjct: 315 IERKINPNLVTFSA 328
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Query: 117 YSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMK 176
Y V++ S ++DA L G M ++ PS ++ + + +M+
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 177 EDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKW 236
G+ N+++YNILI F +R+ + + + G PD+ + L++G C +
Sbjct: 106 ILGIS-HNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRI 164
Query: 237 KEACQYFVEMIEKGLLPQKVTFETLYRGL 265
+A +M+E G P VTF TL GL
Sbjct: 165 SDAVALVDQMVEMGYKPDTVTFTTLIHGL 193
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 145/288 (50%), Gaps = 17/288 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
YT+L+ G C +R A R L +MI++ + PNV+TY+ LL+ + +
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK----------VL 277
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLH---VYSRAHQPQLSLDKLNFMKEKGICPTVATYS 118
A+++F+EM I+PD+ ++S +++ ++ R + D M KG V +Y+
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD---LMVSKGCLADVVSYN 334
Query: 119 SVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 178
+++ C R+ED +L EM + G+ + TYN + + D + A + + QM
Sbjct: 335 TLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFF 394
Query: 179 GLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKE 238
G+ P++ +YNIL+G ++ I+ D++ + D+ +YT +I G+C+ K +E
Sbjct: 395 GIS-PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Query: 239 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 286
A F + KGL P VT+ T+ GL +L L K+ +E +
Sbjct: 454 AWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 138/267 (51%), Gaps = 11/267 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y ++I CK R++ A F E+ +G+ PNVVTY L+NG+C S R+
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN------SSRWS---- 242
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
+A ++ +M + I P+V ++S +L + + + + + M I P + TYSS++
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
LC RI++A ++ MV G +YN + K MKL+R+M + GL
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL- 361
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
V N +YN LI F +D +E ++ + G+ PD+ +Y +L+ GLC+ + ++A
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQS 268
F +M ++ + VT+ T+ RG+ ++
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKT 448
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 138/267 (51%), Gaps = 11/267 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+ +I +C ++ +A LG+M++ G EP+ VT L+NG CRR +
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRR----------NRVS 172
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
+A + D+M G +PD+ +++ ++ + + + D ++ KGI P V TY+++V
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
LC+ R DA LL +M++ + P+ TY+ + A +L+ +M +
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI- 291
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P++ +Y+ LI +R+D ++++ + G D+ SY LI+G C+ ++ ++ +
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQS 268
F EM ++GL+ VT+ TL +G Q+
Sbjct: 352 LFREMSQRGLVSNTVTYNTLIQGFFQA 378
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 142/322 (44%), Gaps = 51/322 (15%)
Query: 14 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMRVR 73
+++ A +M++ P++V +N LL+ + + ++++ I +K M V
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKL------KKYDVVISLGKK----MEVL 114
Query: 74 GIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDA 133
GI D+ +F+IV++ + Q L+L L M + G P T S+V C R+ DA
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 134 EELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIG 193
L+ +MV G P YN K N A +++++ G+ PN+ +Y L+
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI-RPNVVTYTALVN 233
Query: 194 MFMALNR--------MDMV---------------------------REIWNDVKGSGLGP 218
+R DM+ +E++ ++ + P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 219 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTW 274
D+ +Y+ LI+GLC + EA Q F M+ KG L V++ TL G ++ D ++ +
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 275 RRLKKK-LDEESITFGSEFQNY 295
R + ++ L ++T+ + Q +
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGF 375
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 134/293 (45%), Gaps = 21/293 (7%)
Query: 18 AERFLG-EMIERGVEPNVVTYNVLLNGVCR---RASLHPS-----ERFEKT------IRN 62
A+RFL ++E G + + CR RAS S ER KT + +
Sbjct: 9 AKRFLHRNLLENGKPRTASSPSFSHCSSCRCWVRASSSVSGGDLRERLSKTRLRDIKLND 68
Query: 63 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVK 122
A +F +M P + F+ +L + + + + M+ GI + T++ V+
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 123 CLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCV 182
C C C ++ A +LG+M++ G P T + R + A+ L +M E G
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY-K 187
Query: 183 PNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQY 242
P++ +YN +I R++ + + +++ G+ P++ +YT L++GLC +W +A +
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 243 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGS 290
+MI+K + P +T+ L +++ + + L + +D + +T+ S
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 138/267 (51%), Gaps = 15/267 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
YT+LI G CK +D A L EM + G++PN+ TYN ++NG+C+ + I
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN----------IE 508
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A K+ E G+ D +++ ++ Y ++ + + + L M KG+ PT+ T++ ++
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
C G +ED E+LL M+ G+ P+A T+N K+Y R + A +Y+ M G+
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P+ +Y L+ M ++ ++KG G + +Y++LI G +++K+ EA +
Sbjct: 629 -PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
Query: 242 YFVEMIEKGLLPQKVTF----ETLYRG 264
F +M +GL K F +T Y+G
Sbjct: 688 VFDQMRREGLAADKEIFDFFSDTKYKG 714
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 134/263 (50%), Gaps = 11/263 (4%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+YT+LI G+CK I A +F EM R + P+V+TY +++G C+ +
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM---------- 402
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
A K+F EM +G+EPD +F+ +++ Y +A + + N M + G P V TY+++
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
+ LC G ++ A ELL EM + G+ P+ TYN + A+KL + + GL
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
+ +Y L+ + MD +EI ++ G GL P + ++ +L++G C ++
Sbjct: 523 NADTV-TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 241 QYFVEMIEKGLLPQKVTFETLYR 263
+ M+ KG+ P TF +L +
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVK 604
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 138/294 (46%), Gaps = 11/294 (3%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+T LI G+CK + A R MI+ G PNVVTY L++G+C+ L
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD---------- 473
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
+A ++ EM G++P++ +++ +++ ++ + ++ + + G+ TY++++
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
C G ++ A+E+L EM+ G+ P+ T+N + KL M G+
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI- 592
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
PN ++N L+ + N + I+ D+ G+GPD +Y L+ G C+ + KEA
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 295
F EM KG T+ L +G ++ R + ++ E + E ++
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF 706
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 121/254 (47%), Gaps = 11/254 (4%)
Query: 24 EMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 83
E E GV NV +YN++++ VC+ I+ A + M ++G PDV S+S
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGR----------IKEAHHLLLLMELKGYTPDVISYS 285
Query: 84 IVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRN 143
V++ Y R + + MK KG+ P Y S++ LC ++ +AEE EM+R
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 144 GVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDM 203
G+ P Y + R D A K + +M + P++ +Y +I F + M
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI-TPDVLTYTAIISGFCQIGDMVE 404
Query: 204 VREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 263
++++++ GL PD ++T LI+G C+ K+A + MI+ G P VT+ TL
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 264 GLIQSDMLRTWRRL 277
GL + L + L
Sbjct: 465 GLCKEGDLDSANEL 478
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 129/292 (44%), Gaps = 26/292 (8%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--------------- 46
Y +I+ C++ RI A L M +G P+V++Y+ ++NG CR
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 47 RASLHPSERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQ 96
R L P+ +I AE+ F EM +GI PD ++ ++ + + +
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 97 LSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFF 156
+ M + I P V TY++++ C G + +A +L EM G+ P + T+
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 157 KEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGL 216
Y A +++ M + G C PN+ +Y LI +D E+ +++ GL
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAG-CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 217 GPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 268
P++ +Y +++GLC+ +EA + E GL VT+ TL +S
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 7/242 (2%)
Query: 60 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR-AHQPQLSLDKLNFMKEKGICPTVATYS 118
+R A +VF++M G+ V S ++ L S+ ++ ++ E G+C VA+Y+
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 119 SVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 178
V+ +C GRI++A LL M G P +Y+ Y + + KL MK
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 179 GLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKE 238
GL PN + Y +IG+ + ++ E ++++ G+ PD YT LI G C++ +
Sbjct: 311 GL-KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 239 ACQYFVEMIEKGLLPQKVTFETLYRGLIQ-SDMLRTWRRLK----KKLDEESITFGSEFQ 293
A ++F EM + + P +T+ + G Q DM+ + K L+ +S+TF
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 294 NY 295
Y
Sbjct: 430 GY 431
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y +L+ G CK + A EM +G +V TY+VL+ G +R K
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR----------KKFL 683
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLN 103
A +VFD+MR G+ D F + +P +D ++
Sbjct: 684 EAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPID 725
>sp|Q9LFM6|PP375_ARATH Pentatricopeptide repeat-containing protein At5g11310,
mitochondrial OS=Arabidopsis thaliana GN=At5g11310 PE=2
SV=1
Length = 602
Score = 134 bits (338), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 144/279 (51%), Gaps = 15/279 (5%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
++ L+ GW + ++ AE+ EM V+P VVTY L+ G CR + +
Sbjct: 252 IFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRM----------RRV 301
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLN--FMKEKGICPTVATYS 118
+ A +V +EM++ +E + F+ ++ A + +L + F+ E G PT+ TY+
Sbjct: 302 QIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESG--PTIVTYN 359
Query: 119 SVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 178
S+VK C G + A ++L M+ GV P+ TYN FFK + M LY ++ E
Sbjct: 360 SLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEA 419
Query: 179 GLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKE 238
G P+ +Y++++ M ++ + ++ ++K G+ PDL + TMLIH LC + +E
Sbjct: 420 GHS-PDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEE 478
Query: 239 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 277
A + F + +G++PQ +TF+ + GL M +RL
Sbjct: 479 AFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRL 517
Score = 39.7 bits (91), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 82/227 (36%), Gaps = 48/227 (21%)
Query: 64 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKC 123
E DE GIEP V + S + S+ K MK G + + + SVV
Sbjct: 89 ESALDET---GIEPSVELVHALFDRLSSSPMLLHSVFKWAEMK-PGFTLSPSLFDSVVNS 144
Query: 124 LCSCGRIEDAEELLGEMVRN---GVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKE--- 177
LC E A L+ + VR+ SA+T+ + Y A++ + +
Sbjct: 145 LCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEP 204
Query: 178 ---------------DGLC-----------------------VPNMHSYNILIGMFMALN 199
D LC VP++ +NIL+ +
Sbjct: 205 VCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSR 264
Query: 200 RMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEM 246
++ ++W ++K + P + +Y LI G C ++ + A + EM
Sbjct: 265 KLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEM 311
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 134 bits (337), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 138/267 (51%), Gaps = 11/267 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+T+LI+G N+ A + +M++RG +P++VTY ++NG+C+R I
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD----------ID 240
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A + +M IE DV ++ ++ + +L+ M KGI P V TYSS++
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
CLC+ GR DA LL +M+ + P+ T++ + A KLY +M + +
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI- 359
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P++ +Y+ LI F +R+D + ++ + P++ +Y+ LI G C+ ++ +E +
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQS 268
F EM ++GL+ VT+ TL G Q+
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQA 446
Score = 134 bits (336), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 141/283 (49%), Gaps = 11/283 (3%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y+SLI C R A R L +MIER + PNVVT++ L++ + E +
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK----------EGKLV 345
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
AEK++DEM R I+PD+ ++S +++ + + + M K P V TYS+++
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
K C R+E+ EL EM + G+ + TY + +D + A +++QM G+
Sbjct: 406 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 465
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
PN+ +YNIL+ ++ ++ ++ S + PD+ +Y ++I G+C+ K ++ +
Sbjct: 466 -PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 284
F + KG+ P + + T+ G + L KK+ E+
Sbjct: 525 LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 136/299 (45%), Gaps = 16/299 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+ L+ K+N+ ++ +M G+ ++ TY++ +N CRR+ L
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSL--------- 136
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A V +M G EPD+ + S +L+ Y + + ++ ++ M E G P T+++++
Sbjct: 137 -ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
L + +A L+ +MV+ G P TY R D + A+ L ++M E G
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM-EKGKI 254
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
++ YN +I MD ++ ++ G+ PD+ +Y+ LI LC +W +A +
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNY 295
+MIE+ + P VTF L ++ L +L K+ +D + T+ S +
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 111/229 (48%), Gaps = 11/229 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y++LI G+CK R++ EM +RG+ N VTY L++G + +
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ----------ARDCD 450
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
NA+ VF +M G+ P++ +++I+L + + ++ +++ + P + TY+ ++
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
+ +C G++ED EL + GV P+ YN + + A L ++MKEDG
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG-P 569
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGL 230
+PN +YN LI + + E+ +++ G D + ++ + L
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 120/313 (38%), Gaps = 52/313 (16%)
Query: 29 GVEPNVVTY-NVLLNGVCRRASLHPSERFEKTIRN----------AEKVFDEMRVRGIEP 77
G P V ++ N+ +G R+ S + + +RN A +F +M P
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFP 81
Query: 78 DVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCL------------- 124
+ F+ +L ++ ++ +L + M+ GI + TYS + C
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 125 ----------------------CSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGR 162
C RI DA L+ +MV G P T+
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 163 KDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDS 222
A+ A+ L QM + G C P++ +Y ++ +D+ + ++ + D+
Sbjct: 202 NKASEAVALVDQMVQRG-CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 223 YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRR-L 277
Y +I GLC+ + +A F EM KG+ P T+ +L L SD R +
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 278 KKKLDEESITFGS 290
++K++ +TF +
Sbjct: 321 ERKINPNVVTFSA 333
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 147/286 (51%), Gaps = 11/286 (3%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
YT LI G K +M E GV PN+ TYN ++N +C+ + +
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK----------DGRTK 285
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
+A +VFDEMR RG+ ++ +++ ++ R + + ++ MK GI P + TY++++
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
C G++ A L ++ G+ PS TYN + + D +GA K+ ++M+E G+
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI- 404
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P+ +Y ILI F + M+ ++ ++ GL PD+ +Y++LIHG C K + EA +
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 287
F M+EK P +V + T+ G + +L K+++E+ +
Sbjct: 465 LFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELA 510
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 136/279 (48%), Gaps = 11/279 (3%)
Query: 5 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAE 64
LI G C+ I+ + L E+ E G PNVV Y L++G C++ I A+
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGE----------IEKAK 218
Query: 65 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCL 124
+F EM G+ + +++++++ + + + M+E G+ P + TY+ V+ L
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 125 CSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPN 184
C GR +DA ++ EM GV + TYN N A K+ QMK DG+ PN
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN-PN 337
Query: 185 MHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFV 244
+ +YN LI F + ++ + D+K GL P L +Y +L+ G C K A +
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 245 EMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 283
EM E+G+ P KVT+ L +SD + +L+ ++E
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Score = 117 bits (294), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 135/285 (47%), Gaps = 11/285 (3%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y ++ CK R A + EM ERGV N+VTYN L+ G+CR E +
Sbjct: 271 YNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR----------EMKLN 320
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A KV D+M+ GI P++ +++ ++ + + +L +K +G+ P++ TY+ +V
Sbjct: 321 EANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILV 380
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
C G A +++ EM G+ PS TY + + A++L M+E GL
Sbjct: 381 SGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGL- 439
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
VP++H+Y++LI F +M+ ++ + P+ Y +I G C++ A +
Sbjct: 440 VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALK 499
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 286
EM EK L P ++ + L + + RL +K+ + I
Sbjct: 500 LLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 125/265 (47%), Gaps = 12/265 (4%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+Y +I + + ++++ + EM++ G P +N LL V +S + F
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSF---- 151
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
F+E + + + DV SF I++ A + + S D L + E G P V Y+++
Sbjct: 152 ------FNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTL 204
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
+ C G IE A++L EM + G+ + TY ++Y +M+EDG+
Sbjct: 205 IDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGV 264
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
PN+++YN ++ R +++++++ G+ ++ +Y LI GLC + K EA
Sbjct: 265 -FPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEAN 323
Query: 241 QYFVEMIEKGLLPQKVTFETLYRGL 265
+ +M G+ P +T+ TL G
Sbjct: 324 KVVDQMKSDGINPNLITYNTLIDGF 348
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 117/263 (44%), Gaps = 46/263 (17%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y +LI G+C + ++ A ++ RG+ P++VTYN+L++G CR+
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD----------TS 390
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A K+ EM RGI+P +++I++ ++R+ + ++ M+E G+ P V TYS ++
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
C G++ +A L MV P+ YN Y + A+KL ++M+E L
Sbjct: 451 HGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL- 509
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P++ SY +I LC+++K KEA +
Sbjct: 510 -----------------------------------APNVASYRYMIEVLCKERKSKEAER 534
Query: 242 YFVEMIEKGLLPQKVTFETLYRG 264
+MI+ G+ P + R
Sbjct: 535 LVEKMIDSGIDPSTSILSLISRA 557
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 88/207 (42%), Gaps = 5/207 (2%)
Query: 83 SIVLHVYSRAHQPQL--SLDKLNFMKEKGICPT-VATYSSVVKCLCSCGRIEDAEELLGE 139
S++L V S Q S L+++ E T Y ++ + + E
Sbjct: 60 SLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNE 119
Query: 140 MVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALN 199
MV NG P + +N G N + + K V +++S+ ILI
Sbjct: 120 MVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK--VVLDVYSFGILIKGCCEAG 177
Query: 200 RMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 259
++ ++ ++ G P++ YT LI G C+K + ++A F EM + GL+ + T+
Sbjct: 178 EIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYT 237
Query: 260 TLYRGLIQSDMLRTWRRLKKKLDEESI 286
L GL ++ + + + +K+ E+ +
Sbjct: 238 VLINGLFKNGVKKQGFEMYEKMQEDGV 264
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+Y ++I G+CK A + L EM E+ + PNV +Y ++ +C+ E+
Sbjct: 480 IYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK----------ERKS 529
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH 93
+ AE++ ++M GI+P + S++ + +H
Sbjct: 530 KEAERLVEKMIDSGIDPSTSILSLISRAKNDSH 562
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 145/307 (47%), Gaps = 26/307 (8%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERF----- 56
Y +LIYG CK ++ AE +LG+M+ G+EP+ TYN L+ G C+ + +ER
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAV 348
Query: 57 --------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQ 96
E A +F+E +GI+P+V ++ ++ S
Sbjct: 349 FNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMIL 408
Query: 97 LSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFF 156
+ N M EKG+ P V T++ +V LC G + DA+ L+ M+ G P T+N
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 157 KEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGL 216
Y + A+++ M ++G+ P++++YN L+ ++ + V E + + G
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGV-DPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 217 GPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR 276
P+L ++ +L+ LC +K EA EM K + P VTF TL G ++ L
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 277 LKKKLDE 283
L +K++E
Sbjct: 588 LFRKMEE 594
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 45/293 (15%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+Y +LI G I A + EM E+G+ P V T+N+L+NG+C+ +
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC----------V 442
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
+A+ + M +G PD+ +F+I++H YS + + +L+ L+ M + G+ P V TY+S+
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEY-RGRK---------------- 163
+ LC + ED E MV G P+ T+N + R RK
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Query: 164 ------------------DANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVR 205
D +GA L+R+M+E + +YNI+I F + M
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAE 622
Query: 206 EIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 258
+++ ++ LGPD +Y +++ G C+ ++ +EM+E G +P T
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTL 675
Score = 107 bits (268), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 120/247 (48%), Gaps = 11/247 (4%)
Query: 31 EPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 90
EP V +YN ++ + L S F++ A KV+ MR RGI PDV SF+I + +
Sbjct: 108 EPTVFSYNAIM------SVLVDSGYFDQ----AHKVYMRMRDRGITPDVYSFTIRMKSFC 157
Query: 91 RAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAE 150
+ +P +L LN M +G V Y +VV + EL G+M+ +GV
Sbjct: 158 KTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLS 217
Query: 151 TYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWND 210
T+N + + D KL ++ + G+ +PN+ +YN+ I +D +
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGV-LPNLFTYNLFIQGLCQRGELDGAVRMVGC 276
Query: 211 VKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 270
+ G PD+ +Y LI+GLC+ K++EA Y +M+ +GL P T+ TL G + M
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 271 LRTWRRL 277
++ R+
Sbjct: 337 VQLAERI 343
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 129/267 (48%), Gaps = 17/267 (6%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y +++ G+ + N G+M+ GV + T+N LL +C++ ++
Sbjct: 184 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGD----------VK 233
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
EK+ D++ RG+ P++ ++++ + + + ++ + + E+G P V TY++++
Sbjct: 234 ECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLI 293
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL- 180
LC + ++AE LG+MV G+ P + TYN Y G ++L ++ D +
Sbjct: 294 YGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC----KGGMVQLAERIVGDAVF 349
Query: 181 --CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKE 238
VP+ +Y LI + ++N+ G G+ P++ Y LI GL + E
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409
Query: 239 ACQYFVEMIEKGLLPQKVTFETLYRGL 265
A Q EM EKGL+P+ TF L GL
Sbjct: 410 AAQLANEMSEKGLIPEVQTFNILVNGL 436
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 26/179 (14%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPS-ERFEK-- 58
+ L+ C+ ++D A L EM + V P+ VT+ L++G C+ L + F K
Sbjct: 534 FNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME 593
Query: 59 -----------------------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQP 95
+ AEK+F EM R + PD ++ +++ + +
Sbjct: 594 EAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNV 653
Query: 96 QLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNC 154
L L M E G P++ T V+ CLC R+ +A ++ MV+ G+ P A C
Sbjct: 654 NLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTIC 712
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 3/178 (1%)
Query: 94 QPQLSLDKLNFM-KEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRN-GVCPSAET 151
P +L+ N M KE G T++TY SV++ L G+ E EE+L +M N G
Sbjct: 19 DPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGV 78
Query: 152 YNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDV 211
Y K Y + A+ ++ +M C P + SYN ++ + + D +++ +
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYD-CEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137
Query: 212 KGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 269
+ G+ PD+ S+T+ + C+ + A + M +G V + T+ G + +
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEEN 195
>sp|Q9C9A2|PP112_ARATH Pentatricopeptide repeat-containing protein At1g71060,
mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2
SV=1
Length = 510
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 145/288 (50%), Gaps = 27/288 (9%)
Query: 2 YTSLIYGWCK---INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEK 58
YT L+ GW + + R+D R EM + G EP+VV Y +++N C+ ++++E+
Sbjct: 235 YTILLEGWGQELNLLRVDEVNR---EMKDEGFEPDVVAYGIIINAHCK------AKKYEE 285
Query: 59 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYS 118
IR F+EM R +P F +++ + +L+ K G TY+
Sbjct: 286 AIR----FFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYN 341
Query: 119 SVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 178
++V C R+EDA + + EM GV P+A TY+ + + A ++Y+ M
Sbjct: 342 ALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS-- 399
Query: 179 GLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKE 238
C P + +Y I++ MF R+DM +IW+++KG G+ P + ++ LI LC + K E
Sbjct: 400 --CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDE 457
Query: 239 ACQYFVEMIEKGLLPQKVTFETLYRGLIQ-------SDMLRTWRRLKK 279
AC+YF EM++ G+ P F L + L+ +D++ RL+K
Sbjct: 458 ACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRLRK 505
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 110/228 (48%), Gaps = 10/228 (4%)
Query: 58 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNF-MKEKGICPTVAT 116
+ + +A+KVFD+M+ + EPD+ S++I+L + + L +D++N MK++G P V
Sbjct: 211 RNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELN-LLRVDEVNREMKDEGFEPDVVA 269
Query: 117 YSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMK 176
Y ++ C + E+A EM + PS + K N A++ + + K
Sbjct: 270 YGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSK 329
Query: 177 EDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKW 236
G + +YN L+G + RM+ + ++++ G+GP+ +Y +++H L Q+
Sbjct: 330 SSGFPL-EAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRS 388
Query: 237 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML----RTWRRLKKK 280
KEA + + M P T+E + R + L + W +K K
Sbjct: 389 KEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGK 433
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 16/208 (7%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
++ SLI G +++ A F G TYN L+ C S+R E
Sbjct: 304 IFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCW------SQRME--- 354
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGIC-PTVATYSS 119
+A K DEMR++G+ P+ ++ I+LH R + + + + M C PTV+TY
Sbjct: 355 -DAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS----CEPTVSTYEI 409
Query: 120 VVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDG 179
+V+ C+ R++ A ++ EM GV P ++ + A + + +M + G
Sbjct: 410 MVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVG 469
Query: 180 LCVPNMHSYNILIGMFMALNRMDMVREI 207
+ P H ++ L + R D V ++
Sbjct: 470 IRPPG-HMFSRLKQTLLDEGRKDKVTDL 496
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/196 (18%), Positives = 91/196 (46%), Gaps = 2/196 (1%)
Query: 66 VFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLC 125
+ D+M+ + + T F+++ Y+RA + + ++ + M+E G + ++ ++ L
Sbjct: 150 LVDDMKAKKLLSKET-FALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLS 208
Query: 126 SCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNM 185
+ DA+++ +M + P ++Y + + + ++ R+MK++G P++
Sbjct: 209 KSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGF-EPDV 267
Query: 186 HSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVE 245
+Y I+I + + +N+++ P + LI+GL ++K +A ++F
Sbjct: 268 VAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFER 327
Query: 246 MIEKGLLPQKVTFETL 261
G + T+ L
Sbjct: 328 SKSSGFPLEAPTYNAL 343
>sp|O80958|PP194_ARATH Pentatricopeptide repeat-containing protein At2g39230,
mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1
Length = 867
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 138/280 (49%), Gaps = 12/280 (4%)
Query: 9 WCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFD 68
+CK ++D A FL M ++G+EPNVV YN ++ CR K + A +F
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRM----------KNMDLARSIFS 508
Query: 69 EMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCG 128
EM +G+EP+ ++SI++ + + Q + D +N M Y++++ LC G
Sbjct: 509 EMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVG 568
Query: 129 RIEDAEELLGEMVRNG-VCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHS 187
+ A+E+L +++ S +YN + D + A++ YR+M E+G PN+ +
Sbjct: 569 QTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKS-PNVVT 627
Query: 188 YNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMI 247
+ LI F NRMD+ E+ +++K L DL +Y LI G C+K K A F E+
Sbjct: 628 FTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELP 687
Query: 248 EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 287
E GL+P + +L G + L KK+ + I+
Sbjct: 688 ELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGIS 727
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 141/312 (45%), Gaps = 27/312 (8%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR-------------- 47
Y +++ C++ +D+A EM+E+G+EPN TY++L++G +
Sbjct: 487 YNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMN 546
Query: 48 -ASLHPSERFEKTIRNA-----------EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQP 95
++ +E TI N E + + ++ + TS++ ++ + +
Sbjct: 547 ASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDT 606
Query: 96 QLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCF 155
+++ M E G P V T++S++ C R++ A E+ EM + Y
Sbjct: 607 DSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGAL 666
Query: 156 FKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSG 215
+ + D A L+ ++ E GL +PN+ YN LI F L +MD +++ + G
Sbjct: 667 IDGFCKKNDMKTAYTLFSELPELGL-MPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDG 725
Query: 216 LGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWR 275
+ DL +YT +I GL + A + E+++ G++P ++ L GL +
Sbjct: 726 ISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKAS 785
Query: 276 RLKKKLDEESIT 287
++ +++ ++ +T
Sbjct: 786 KMLEEMKKKDVT 797
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 126/266 (47%), Gaps = 11/266 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y S+I G+ K+ D A EM E G PNVVT+ L+NG C+ S R + +
Sbjct: 593 YNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCK------SNRMDLAL- 645
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
++ EM+ ++ D+ ++ ++ + + + + + + + E G+ P V+ Y+S++
Sbjct: 646 ---EMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLI 702
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
+ G+++ A +L +MV +G+ TY + N A LY ++ + G+
Sbjct: 703 SGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGI- 761
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
VP+ + +L+ + ++ ++K + P++ Y+ +I G + EA +
Sbjct: 762 VPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFR 821
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQ 267
EM+EKG++ F L G ++
Sbjct: 822 LHDEMLEKGIVHDDTVFNLLVSGRVE 847
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 116/278 (41%), Gaps = 18/278 (6%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPSERFEKT 59
+++ + CK + MA L EM + GV + TY ++ + E
Sbjct: 276 LFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVK----------EGN 325
Query: 60 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSS 119
+ A +V DEM GI V + + +++ Y + ++ +LD N M+E+G+ P +S
Sbjct: 326 MEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSV 385
Query: 120 VVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDG 179
+V+ C +E A E M + PS+ + + + A++++ E
Sbjct: 386 MVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESW 445
Query: 180 LCVPNMHSY--NILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWK 237
+ H + N + +F ++D ++ G+ P++ Y ++ C +
Sbjct: 446 IA----HGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMD 501
Query: 238 EACQYFVEMIEKGLLPQKVTFETLYRGLIQS-DMLRTW 274
A F EM+EKGL P T+ L G ++ D W
Sbjct: 502 LARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAW 539
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 105/261 (40%), Gaps = 47/261 (18%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+ L+ + + R+D A G M++R V P V N +L+ + R I
Sbjct: 172 FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVR----------SNLID 221
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A++++++M + G+ D + +++ R +P+ ++ + +G P +S V
Sbjct: 222 EAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAV 281
Query: 122 KCLCSCGRIEDAEELLGEMV-RNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
+ C + A +LL EM + GV S ETY
Sbjct: 282 QAACKTPDLVMALDLLREMRGKLGVPASQETYTS-------------------------- 315
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
+I F+ M+ + +++ G G+ + + T L++G C+ + +A
Sbjct: 316 ----------VIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKAL 365
Query: 241 QYFVEMIEKGLLPQKVTFETL 261
F M E+GL P KV F +
Sbjct: 366 DLFNRMEEEGLAPDKVMFSVM 386
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/251 (18%), Positives = 110/251 (43%), Gaps = 9/251 (3%)
Query: 38 NVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQL 97
N+L+ V +L P+ + ++++ G E +F+ +L+ Y R +
Sbjct: 135 NLLVMFVSNNPTLIPNVMVNNLVDSSKRF-------GFELTPRAFNYLLNAYIRNKRMDY 187
Query: 98 SLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFK 157
++D M ++ + P V ++V+ L I++A+E+ +MV GV T +
Sbjct: 188 AVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMR 247
Query: 158 EYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGS-GL 216
+ A+K++R++ G P+ +++ + + M ++ +++G G+
Sbjct: 248 ASLRERKPEEAVKIFRRVMSRG-AEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGV 306
Query: 217 GPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR 276
++YT +I ++ +EA + EM+ G+ + +L G + + L
Sbjct: 307 PASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALD 366
Query: 277 LKKKLDEESIT 287
L +++EE +
Sbjct: 367 LFNRMEEEGLA 377
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 143/285 (50%), Gaps = 11/285 (3%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+ +LI+G N+ A + M+ RG +P++ TY ++NG+C+R I
Sbjct: 188 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD----------ID 237
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A + +M IE DV ++ ++ +L+ M KGI P V TY+S++
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
+CLC+ GR DA LL +M+ + P+ T++ + A KLY +M + +
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI- 356
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P++ +Y+ LI F +R+D + ++ + P++ +Y LI G C+ ++ +E +
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 286
F EM ++GL+ VT+ TL +GL Q+ +++ KK+ + +
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Score = 130 bits (328), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 143/283 (50%), Gaps = 11/283 (3%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y SLI C R A R L +MIER + PNVVT++ L++ + E +
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK----------EGKLV 342
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
AEK++DEM R I+PD+ ++S +++ + + + M K P V TY++++
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
K C R+E+ EL EM + G+ + TYN + D + A K++++M DG+
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV- 461
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P++ +Y+IL+ +++ ++ ++ S + PD+ +Y ++I G+C+ K ++
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 284
F + KG+ P + + T+ G + + L +++ E+
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 135/279 (48%), Gaps = 17/279 (6%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y LI +C+ +++ +A LG+M++ G EP++VT + LLNG C K I
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCH----------GKRIS 167
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLH---VYSRAHQPQLSLDKLNFMKEKGICPTVATYS 118
A + D+M V +P+ +F+ ++H ++++A + +D+ M +G P + TY
Sbjct: 168 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDR---MVARGCQPDLFTYG 224
Query: 119 SVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 178
+VV LC G I+ A LL +M + + Y K+ N A+ L+ +M
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284
Query: 179 GLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKE 238
G+ PN+ +YN LI R + +D+ + P++ +++ LI ++ K E
Sbjct: 285 GI-RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 239 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 277
A + + EMI++ + P T+ +L G D L + +
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 124/256 (48%), Gaps = 30/256 (11%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--------------- 46
Y+SLI G+C +R+D A+ MI + PNVVTYN L+ G C+
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 47 -RASLHPSERFEKTIRN---------AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQ 96
R + + + I+ A+K+F +M G+ PD+ ++SI+L + + +
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 97 LSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFF 156
+L ++++ + P + TY+ +++ +C G++ED +L + GV P+ Y
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Query: 157 KEY--RGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGS 214
+ +G K+ A L+R+MKEDG +PN +YN LI + E+ +++
Sbjct: 543 SGFCRKGLKEEADA--LFREMKEDG-TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSC 599
Query: 215 GLGPDLDSYTMLIHGL 230
G D + +M+I+ L
Sbjct: 600 GFVGDASTISMVINML 615
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 130/282 (46%), Gaps = 16/282 (5%)
Query: 14 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMRVR 73
++D A GEM++ P++V +N LL+ + + +F+ I E+ M+
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKM------NKFDLVISLGER----MQNL 109
Query: 74 GIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDA 133
I D+ S++I+++ + R Q L+L L M + G P + T SS++ C RI +A
Sbjct: 110 RISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 169
Query: 134 EELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIG 193
L+ +M P+ T+N A+ A+ L +M G C P++ +Y ++
Sbjct: 170 VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG-CQPDLFTYGTVVN 228
Query: 194 MFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 253
+D+ + ++ + D+ YT +I LC + +A F EM KG+ P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288
Query: 254 QKVTFETLYRGLIQ----SDMLRTWRR-LKKKLDEESITFGS 290
VT+ +L R L SD R +++K++ +TF +
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Score = 91.3 bits (225), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 22/302 (7%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+ L+ K+N+ D+ M + ++ +YN+L+N CRR+ L
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPL--------- 133
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVY---SRAHQPQLSLDKLNFMKEKGICPTVATYS 118
A V +M G EPD+ + S +L+ Y R + +D++ M+ + P T++
Sbjct: 134 -ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ---PNTVTFN 189
Query: 119 SVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 178
+++ L + +A L+ MV G P TY R D + A+ L ++M E
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-EK 248
Query: 179 GLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKE 238
G ++ Y +I ++ ++ ++ G+ P++ +Y LI LC +W +
Sbjct: 249 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 308
Query: 239 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQ 293
A + +MIE+ + P VTF L ++ L +L K+ +D + T+ S
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
Query: 294 NY 295
+
Sbjct: 369 GF 370
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+YT++I G+C+ + A+ EM E G PN TYN L+ RA L ++
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI-----RARLRDGDK----- 586
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHV 88
+ ++ EMR G D ++ S+V+++
Sbjct: 587 AASAELIKEMRSCGFVGDASTISMVINM 614
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 135/267 (50%), Gaps = 11/267 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+ +LI+G + NR A + M+ +G +P++VTY +++NG+C+R I
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD----------ID 238
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A + +M IEP V ++ ++ +L+ M KGI P V TY+S++
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
+CLC+ GR DA LL +M+ + P+ T++ + A KLY +M + +
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI- 357
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P++ +Y+ LI F +R+D + ++ + P++ +Y LI G C+ ++ E +
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQS 268
F EM ++GL+ VT+ TL G Q+
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQA 444
Score = 131 bits (329), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 144/283 (50%), Gaps = 11/283 (3%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y SLI C R A R L +MIER + PNVVT++ L++ + E +
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK----------EGKLV 343
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
AEK++DEM R I+PD+ ++S +++ + + + M K P V TY++++
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
K C R+++ EL EM + G+ + TY + ++ + A +++QM DG+
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV- 462
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
+P++ +Y+IL+ +++ ++ ++ S + PD+ +Y ++I G+C+ K ++
Sbjct: 463 LPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWD 522
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 284
F + KG+ P VT+ T+ G + + L +++ EE
Sbjct: 523 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 136/267 (50%), Gaps = 15/267 (5%)
Query: 4 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--RASLHPSERFEKTIR 61
SL+ G+C NRI A +G+M+E G +P+ T+N L++G+ R RAS
Sbjct: 156 SLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS------------ 203
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A + D M V+G +PD+ ++ IV++ + L+L L M++ I P V Y++++
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
LC+ + DA L EM G+ P+ TYN + + A +L M E +
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
PN+ +++ LI F+ ++ ++++++ + PD+ +Y+ LI+G C + EA
Sbjct: 324 -PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 382
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQS 268
F MI K P VT+ TL +G ++
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKA 409
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 131/270 (48%), Gaps = 11/270 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y+ LI +C+ +++ +A L +M++ G EP++VT N LLNG C I
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCH----------GNRIS 168
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
+A + +M G +PD +F+ ++H R ++ ++ ++ M KG P + TY VV
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
LC G I+ A LL +M + + P YN K+ N A+ L+ +M G+
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI- 287
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
PN+ +YN LI R + +D+ + P++ +++ LI ++ K EA +
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 347
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDML 271
+ EMI++ + P T+ +L G D L
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 134/299 (44%), Gaps = 16/299 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
++ L+ K+N+ D+ +M G+ N+ TY++L+N CRR+ L
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSL--------- 134
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A V +M G EPD+ + + +L+ + ++ ++ + M E G P T+++++
Sbjct: 135 -ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLI 193
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
L R +A L+ MV G P TY R D + A+ L ++M E G
Sbjct: 194 HGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM-EQGKI 252
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P + YN +I ++ ++ ++ G+ P++ +Y LI LC +W +A +
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNY 295
+MIE+ + P VTF L ++ L +L K+ +D + T+ S +
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 134/282 (47%), Gaps = 16/282 (5%)
Query: 14 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMRVR 73
++D A G+M++ P++V ++ LL+ + + +F+ I E +M+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKM------NKFDLVISLGE----QMQNL 110
Query: 74 GIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDA 133
GI ++ ++SI+++ + R Q L+L L M + G P + T +S++ C RI DA
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 134 EELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIG 193
L+G+MV G P + T+N A+ A+ L +M G C P++ +Y I++
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG-CQPDLVTYGIVVN 229
Query: 194 MFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 253
+D+ + ++ + P + Y +I LC + +A F EM KG+ P
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 254 QKVTFETLYRGLIQ----SDMLRTWRR-LKKKLDEESITFGS 290
VT+ +L R L SD R +++K++ +TF +
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y +LI G+CK R+D EM +RG+ N VTY L++G + +
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ----------ARECD 448
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
NA+ VF +M G+ PD+ ++SI+L + + +L +++ + P + TY+ ++
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
+ +C G++ED +L + GV P+ TY + + A L+R+MKE+G
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG-P 567
Query: 182 VPNMHSYNILI 192
+P+ +YN LI
Sbjct: 568 LPDSGTYNTLI 578
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 91/176 (51%), Gaps = 10/176 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
YT+LI+G+ + D A+ +M+ GV P+++TY++LL+G+C +
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK----------VE 483
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A VF+ ++ +EPD+ +++I++ +A + + D + KG+ P V TY++++
Sbjct: 484 TALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 543
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 177
C G E+A+ L EM G P + TYN + + D + +L R+M+
Sbjct: 544 SGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 87/235 (37%), Gaps = 36/235 (15%)
Query: 60 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSS 119
+ +A +F +M P + FS +L ++ ++ L + M+ GI + TYS
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 120 VVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDG 179
++ C C ++ A +L +M++ G P T N + + A+ L QM E
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE-- 179
Query: 180 LCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEA 239
G PD ++ LIHGL + EA
Sbjct: 180 ----------------------------------MGYQPDSFTFNTLIHGLFRHNRASEA 205
Query: 240 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 294
M+ KG P VT+ + GL + + L KK+++ I G N
Sbjct: 206 VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYN 260
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y +I G CK +++ + +GV+PNVVTY +++G CR+
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG----------LKE 553
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
A+ +F EM+ G PD +++ ++ + R S + ++E C V S++
Sbjct: 554 EADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAE---LIREMRSCRFVGDASTI 609
>sp|Q9FVX2|PP129_ARATH Pentatricopeptide repeat-containing protein At1g77360,
mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2
SV=2
Length = 517
Score = 131 bits (330), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 147/281 (52%), Gaps = 12/281 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y+ L+ GW K + A EMI+ G P++VTY+++++ +C+ +
Sbjct: 240 YSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGR----------VD 289
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A + M +P +S+++H Y ++ + ++D M+ G+ VA ++S++
Sbjct: 290 EALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLI 349
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
C R+++ +L EM GV P++++ N + R + + A ++R+M + +C
Sbjct: 350 GAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK--VC 407
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P+ +Y ++I MF M+ ++W ++ G+ P + ++++LI+GLCE++ ++AC
Sbjct: 408 EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACV 467
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 282
EMIE G+ P VTF L + LI+ + + L +K++
Sbjct: 468 LLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKMN 508
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 130/293 (44%), Gaps = 50/293 (17%)
Query: 9 WCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFD 68
+ + ++D A M + + PN+V +N LL+ +C+ K +R A++VF+
Sbjct: 178 YARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCK----------SKNVRKAQEVFE 227
Query: 69 EMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNF--MKEKGICPTVATYSSVVKCLCS 126
MR R PD ++SI+L + + +P L + F M + G P + TYS +V LC
Sbjct: 228 NMRDR-FTPDSKTYSILLEGWGK--EPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCK 284
Query: 127 CGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMH 186
GR+++A ++ M + P+ Y+ Y A+ + +M+ G+ ++
Sbjct: 285 AGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGM-KADVA 343
Query: 187 SYNILIGMFMALNRMDMVREIWNDVKGSGLG----------------------------- 217
+N LIG F NRM V + ++K G+
Sbjct: 344 VFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM 403
Query: 218 -----PDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 265
PD D+YTM+I CEK++ + A + + M +KG+ P TF L GL
Sbjct: 404 IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGL 456
Score = 81.3 bits (199), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 106/214 (49%), Gaps = 2/214 (0%)
Query: 78 DVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELL 137
+V +F IV+ Y+RA + ++ N M++ + P + ++ ++ LC + A+E+
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 138 GEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMA 197
M R+ P ++TY+ + + + A +++R+M + G C P++ +Y+I++ +
Sbjct: 227 ENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAG-CHPDIVTYSIMVDILCK 284
Query: 198 LNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 257
R+D I + S P Y++L+H + + +EA F+EM G+
Sbjct: 285 AGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV 344
Query: 258 FETLYRGLIQSDMLRTWRRLKKKLDEESITFGSE 291
F +L +++ ++ R+ K++ + +T S+
Sbjct: 345 FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSK 378
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 11/152 (7%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
++ SLI +CK NR+ R L EM +GV PN + N++L H ER EK
Sbjct: 344 VFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILR--------HLIERGEKD- 394
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
A VF +M ++ EPD ++++V+ ++ + + + +M++KG+ P++ T+S +
Sbjct: 395 -EAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVL 452
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETY 152
+ LC + A LL EM+ G+ PS T+
Sbjct: 453 INGLCEERTTQKACVLLEEMIEMGIRPSGVTF 484
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 137/267 (51%), Gaps = 11/267 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+ +LI+G N+ A + M+ +G +P++VTY V++NG+C+R
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL--------- 239
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A + ++M +EP V ++ ++ + +L+ M+ KGI P V TYSS++
Sbjct: 240 -AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
CLC+ GR DA LL +M+ + P T++ + A KLY +M + +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI- 357
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P++ +Y+ LI F +R+D ++++ + PD+ +Y LI G C+ ++ +E +
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQS 268
F EM ++GL+ VT+ L +GL Q+
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQA 444
Score = 124 bits (311), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 140/283 (49%), Gaps = 11/283 (3%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y+SLI C R A R L +MIER + P+V T++ L++ + E +
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK----------EGKLV 343
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
AEK++DEM R I+P + ++S +++ + + + FM K P V TY++++
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
K C R+E+ E+ EM + G+ + TYN + D + A +++++M DG+
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV- 462
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
PN+ +YN L+ +++ ++ ++ S + P + +Y ++I G+C+ K ++
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 284
F + KG+ P V + T+ G + L K++ E+
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 140/279 (50%), Gaps = 17/279 (6%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y+ LI +C+ +++ +A LG+M++ G EPN+VT + LLNG C K I
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH----------SKRIS 168
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLH---VYSRAHQPQLSLDKLNFMKEKGICPTVATYS 118
A + D+M V G +P+ +F+ ++H ++++A + +D+ M KG P + TY
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDR---MVAKGCQPDLVTYG 225
Query: 119 SVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 178
VV LC G + A LL +M + + P YN K + A+ L+++M+
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 179 GLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKE 238
G+ PN+ +Y+ LI R + +D+ + PD+ +++ LI ++ K E
Sbjct: 286 GI-RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344
Query: 239 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 277
A + + EM+++ + P VT+ +L G D L +++
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Score = 98.2 bits (243), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 132/282 (46%), Gaps = 16/282 (5%)
Query: 14 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMRVR 73
++D A GEM++ P+++ ++ LL+ + + +F+ I E +M+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKM------NKFDVVISLGE----QMQNL 110
Query: 74 GIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDA 133
GI + ++SI+++ + R Q L+L L M + G P + T SS++ C RI +A
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 134 EELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIG 193
L+ +M G P+ T+N A+ AM L +M G C P++ +Y +++
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-CQPDLVTYGVVVN 229
Query: 194 MFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 253
D+ + N ++ L P + Y +I GLC+ + +A F EM KG+ P
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 254 QKVTFETLYRGLIQ----SDMLRTWRRL-KKKLDEESITFGS 290
VT+ +L L SD R + ++K++ + TF +
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 111/229 (48%), Gaps = 11/229 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y +LI G+CK R++ EM +RG+ N VTYN+L+ G+ +
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM--------- 449
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A+++F EM G+ P++ +++ +L + + + ++ +++ + PT+ TY+ ++
Sbjct: 450 -AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
+ +C G++ED +L + GV P YN + + A L+++MKEDG
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG-T 567
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGL 230
+PN YN LI + + E+ +++ G D + ++ + L
Sbjct: 568 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 1/230 (0%)
Query: 57 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVAT 116
E + +A +F EM P + FS +L ++ ++ + + M+ GI T
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 117 YSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMK 176
YS ++ C C ++ A +LG+M++ G P+ T + Y K + A+ L QM
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 177 EDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKW 236
G PN ++N LI N+ + + + G PDL +Y ++++GLC++
Sbjct: 179 VTGY-QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 237 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 286
A +M + L P + + T+ GL + + L K+++ + I
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 136/263 (51%), Gaps = 11/263 (4%)
Query: 5 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAE 64
L+ +C+ ++ +A FLG+M++ G EP++VT+ L+NG C R E+ A
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCL------GNRMEE----AM 162
Query: 65 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCL 124
+ ++M GI+PDV ++ ++ + +L + M+ GI P V Y+S+V L
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 125 CSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPN 184
C+ GR DA+ LL M + + P T+N + A +LY +M + PN
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI-APN 281
Query: 185 MHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFV 244
+ +Y LI F +D R+++ ++ G PD+ +YT LI+G C+ +K +A + F
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 245 EMIEKGLLPQKVTFETLYRGLIQ 267
EM +KGL +T+ TL +G Q
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQ 364
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 133/268 (49%), Gaps = 14/268 (5%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
MYT++I CK ++ A +M G+ P+VV Y L+NG+C S R+
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCN------SGRW---- 228
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
R+A+ + M R I+PDV +F+ ++ + + + + + N M I P + TY+S+
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
+ C G +++A ++ M G P Y + K + AMK++ +M + GL
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
N +Y LI F + + ++ +E+++ + G+ P++ +Y +L+H LC K K+A
Sbjct: 349 -TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKAL 407
Query: 241 QYFVEMIEK---GLLPQKVTFETLYRGL 265
F +M ++ G+ P T+ L GL
Sbjct: 408 MIFEDMQKREMDGVAPNIWTYNVLLHGL 435
Score = 107 bits (268), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 138/289 (47%), Gaps = 14/289 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+ +LI + K + AE EMI + PN+ TY L+NG C E +
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC----------MEGCVD 299
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A ++F M +G PDV +++ +++ + + + ++ M +KG+ TY++++
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKE---D 178
+ G+ A+E+ MV GV P+ TYN A+ ++ M++ D
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD 419
Query: 179 GLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKE 238
G+ PN+ +YN+L+ +++ ++ D++ + + +YT++I G+C+ K K
Sbjct: 420 GV-APNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKN 478
Query: 239 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 287
A F + KG+ P VT+ T+ GL + + L +K+ E+ ++
Sbjct: 479 AVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 139/317 (43%), Gaps = 49/317 (15%)
Query: 18 AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMRVRGIEP 77
A M+E P+++ + LLN + + ++F+ I + D +++ G+
Sbjct: 56 ALDLFTHMVESRPLPSIIDFTKLLNVIAKM------KKFDVVI----NLCDHLQIMGVSH 105
Query: 78 DVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELL 137
D+ + +++++ + ++ QP L+ L M + G P + T++S++ C R+E+A ++
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 138 GEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKE--------------DGLC-- 181
+MV G+ P Y N A+ L+ QM+ +GLC
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 182 ------------------VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSY 223
P++ ++N LI F+ + E++N++ + P++ +Y
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 224 TMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKK 279
T LI+G C + EA Q F M KG P V + +L G + D ++ + + +
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 280 K-LDEESITFGSEFQNY 295
K L +IT+ + Q +
Sbjct: 346 KGLTGNTITYTTLIQGF 362
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 152/300 (50%), Gaps = 17/300 (5%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
++T+LI G+ K R+D A L EM ++ ++V YNV ++ + + + +F
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKF---- 260
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
F E+ G++PD +++ ++ V +A++ +++ +++ P Y+++
Sbjct: 261 ------FHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTM 314
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
+ S G+ ++A LL G PS YNC R + A+K++ +MK+D
Sbjct: 315 IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA- 373
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
PN+ +YNILI M ++D E+ + ++ +GL P++ + +++ LC+ QK EAC
Sbjct: 374 -APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC 432
Query: 241 QYFVEMIEKGLLPQKVTFETLYRGLIQSDML-RTWRRLKKKLDEE----SITFGSEFQNY 295
F EM K P ++TF +L GL + + ++ +K LD + SI + S +N+
Sbjct: 433 AMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 492
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 117/264 (44%), Gaps = 11/264 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y+ LI+G K + M E+G + YN++++G C+ +
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK----------VN 604
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A ++ +EM+ +G EP V ++ V+ ++ + + K K I V YSS++
Sbjct: 605 KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
GRI++A +L E+++ G+ P+ T+N ++ N A+ ++ MKE C
Sbjct: 665 DGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK-C 723
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
PN +Y ILI + + + W +++ G+ P SYT +I GL + EA
Sbjct: 724 TPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA 783
Query: 242 YFVEMIEKGLLPQKVTFETLYRGL 265
F G +P + + GL
Sbjct: 784 LFDRFKANGGVPDSACYNAMIEGL 807
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 127/299 (42%), Gaps = 22/299 (7%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+YTSLI + R + + +MI + P++ N ++ C + P +
Sbjct: 484 VYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD--CMFKAGEPEK------ 535
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
+F+E++ R PD S+SI++H +A + + MKE+G Y+ V
Sbjct: 536 --GRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV 593
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
+ C CG++ A +LL EM G P+ TY + A L+ + K +
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
+ N+ Y+ LI F + R+D I ++ GL P+L ++ L+ L + ++ EA
Sbjct: 654 EL-NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEAL 712
Query: 241 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKP 299
F M E P +VT+ L GL + R+ K + F E Q KP
Sbjct: 713 VCFQSMKELKCTPNQVTYGILINGLCKV------RKFNK-----AFVFWQEMQKQGMKP 760
Score = 81.3 bits (199), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 123/285 (43%), Gaps = 17/285 (5%)
Query: 11 KINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEM 70
K+ ++D A + EM ++ PN+ TYN+L++ +CR L A ++ D M
Sbjct: 355 KMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLD----------TAFELRDSM 403
Query: 71 RVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRI 130
+ G+ P+V + +I++ ++ + + M K P T+ S++ L GR+
Sbjct: 404 QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRV 463
Query: 131 EDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNI 190
+DA ++ +M+ + ++ Y K + K+Y+ M C P++ N
Sbjct: 464 DDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN-CSPDLQLLNT 522
Query: 191 LIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 250
+ + R ++ ++K PD SY++LIHGL + E + F M E+G
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 251 LLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGS 290
+ + + G + + +L K + +T+GS
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Score = 77.8 bits (190), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 123/282 (43%), Gaps = 15/282 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y SL+ + D ++ LGEM G P+V T ++ G C +A+ +R
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLG-CVKAN---------KLR 150
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
V MR P ++++ ++ +S + + L M+E G PTV +++++
Sbjct: 151 EGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLI 210
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
+ GR++ A LL EM + + YN + + A K + +++ +GL
Sbjct: 211 RGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL- 269
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P+ +Y +IG+ NR+D E++ ++ + P +Y +I G K+ EA
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 329
Query: 242 YFVEMIEKGLLPQKVTFE---TLYRGLIQSD-MLRTWRRLKK 279
KG +P + + T R + + D L+ + +KK
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK 371
Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 10/184 (5%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+Y+SLI G+ K+ RID A L E++++G+ PN+ T+N LL+ + + + I
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK----------AEEI 708
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
A F M+ P+ ++ I+++ + + + M+++G+ P+ +Y+++
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
+ L G I +A L NG P + YN + A A L+ + + GL
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Query: 181 CVPN 184
+ N
Sbjct: 829 PIHN 832
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 79/196 (40%), Gaps = 38/196 (19%)
Query: 111 CPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAET------------------- 151
CP +Y+S++ + C + +++LGEM G PS T
Sbjct: 97 CPE--SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYD 154
Query: 152 ----------------YNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMF 195
Y + ++ + L++QM+E G P +H + LI F
Sbjct: 155 VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGY-EPTVHLFTTLIRGF 213
Query: 196 MALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 255
R+D + +++K S L D+ Y + I + K A ++F E+ GL P +
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
Query: 256 VTFETLYRGLIQSDML 271
VT+ ++ L +++ L
Sbjct: 274 VTYTSMIGVLCKANRL 289
Score = 32.0 bits (71), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 3/128 (2%)
Query: 160 RGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPD 219
R KD N A++ +R + SYN L+ + D + +I ++ +G GP
Sbjct: 73 RRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPS 132
Query: 220 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL---YRGLIQSDMLRTWRR 276
+++ ++ G + K +E M + P + TL + + SDM+ T +
Sbjct: 133 VNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQ 192
Query: 277 LKKKLDEE 284
++L E
Sbjct: 193 QMQELGYE 200
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 143/282 (50%), Gaps = 14/282 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
YT++I G+ K D A EM++RG+ P+VVTYN ++ +C+ + +
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK----------AQAMD 248
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A +V + M G+ PD +++ +LH Y + QP+ ++ L M+ G+ P V TYS ++
Sbjct: 249 KAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLM 308
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
LC GR +A ++ M + G+ P TY + Y + L M +G+
Sbjct: 309 DYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 368
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P+ + ++ILI + ++D +++ ++ GL P+ +Y +I LC+ + ++A
Sbjct: 369 -PDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 283
YF +MI++GL P + + +L GL + W R ++ + E
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGLCTCN---KWERAEELILE 466
Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 139/295 (47%), Gaps = 14/295 (4%)
Query: 2 YTSLIYGWCKINRI-DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+T L+ G C R D + L M E G PNV +YN+LL G+C R ++ +
Sbjct: 125 FTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLC------DENRSQEAL 178
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
+ D+ R G PDV S++ V++ + + + + M ++GI P V TY+S+
Sbjct: 179 ELLHMMADD-RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSI 237
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
+ LC ++ A E+L MV+NGV P TYN Y A+ ++M+ DG+
Sbjct: 238 IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGV 297
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
P++ +Y++L+ R R+I++ + GL P++ +Y L+ G K E
Sbjct: 298 -EPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356
Query: 241 QYFVEMIEKGLLPQKVTFETLY-----RGLIQSDMLRTWRRLKKKLDEESITFGS 290
M+ G+ P F L +G + ML + ++ L+ ++T+G+
Sbjct: 357 GLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 146/321 (45%), Gaps = 28/321 (8%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL----------- 50
Y+ L+ CK R A + M +RG++P + TY LL G + +L
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363
Query: 51 ----HPSERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQ 96
HP + + A VF +MR +G+ P+ ++ V+ + ++ + +
Sbjct: 364 RNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Query: 97 LSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFF 156
++ M ++G+ P Y+S++ LC+C + E AEEL+ EM+ G+C + +N
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483
Query: 157 KEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGL 216
+ + KL+ M G+ PN+ +YN LI + +MD ++ + + GL
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGV-KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542
Query: 217 GPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR 276
P+ +Y+ LI+G C+ + ++A F EM G+ P +T+ + +GL Q+ +
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602
Query: 277 LKKKLDEESITFGSEFQNYHF 297
L ++ E E Y+
Sbjct: 603 LYVRITESGTQI--ELSTYNI 621
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 143/281 (50%), Gaps = 15/281 (5%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+++ LI + K ++D A +M ++G+ PN VTY ++ +C+ S R E +
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCK------SGRVEDAM 426
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
E++ DE G+ P ++ ++H ++ + + + + M ++GIC ++S+
Sbjct: 427 LYFEQMIDE----GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 482
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
+ C GR+ ++E+L MVR GV P+ TYN Y + AMKL M GL
Sbjct: 483 IDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
PN +Y+ LI + ++RM+ ++ +++ SG+ PD+ +Y +++ GL + ++ A
Sbjct: 543 -KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601
Query: 241 QYFVEMIEKGLLPQKVTFETLYRGL----IQSDMLRTWRRL 277
+ +V + E G + T+ + GL + D L+ ++ L
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNL 642
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 142/295 (48%), Gaps = 11/295 (3%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+Y SLI+G C N+ + AE + EM++RG+ N + +N +++ C+ E +
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK----------EGRV 492
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
+EK+F+ M G++P+V +++ +++ Y A + ++ L+ M G+ P TYS++
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
+ C R+EDA L EM +GV P TYN + + A +LY ++ E G
Sbjct: 553 INGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 612
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
+ + +YNI++ D +++ ++ L + ++ ++I L + + EA
Sbjct: 613 QI-ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 671
Query: 241 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 295
FV GL+P T+ + +I +L +L +++ T S N+
Sbjct: 672 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 726
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 128/282 (45%), Gaps = 28/282 (9%)
Query: 30 VEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 89
V P++ TY +L+ CR L + + N K +G D +F+ +L
Sbjct: 83 VTPDLCTYGILIGCCCRAGRL---DLGFAALGNVIK-------KGFRVDAIAFTPLLKGL 132
Query: 90 SRAHQPQLSLD-KLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRN---GV 145
+ ++D L M E G P V +Y+ ++K LC R ++A ELL M + G
Sbjct: 133 CADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGS 192
Query: 146 CPSAETY----NCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRM 201
P +Y N FFKE D++ A Y +M + G+ +P++ +YN +I M
Sbjct: 193 PPDVVSYTTVINGFFKE----GDSDKAYSTYHEMLDRGI-LPDVVTYNSIIAALCKAQAM 247
Query: 202 DMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 261
D E+ N + +G+ PD +Y ++HG C + KEA + +M G+ P VT+ L
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307
Query: 262 YRGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNYHFK 298
L ++ R++ K+ L E T+G+ Q Y K
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATK 349
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 9/217 (4%)
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKG---ICPTVATYS 118
+A VFDE+ RG + + L +R P ++ + N M G + P + TY
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALADVAR-DSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 119 SVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKL-YRQMKE 177
++ C C GR++ LG +++ G A + K K + AM + R+M E
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 178 DGLCVPNMHSYNILIGMFMALNRMDMVREIWN---DVKGSGLGPDLDSYTMLIHGLCEKQ 234
G C+PN+ SYNIL+ NR E+ + D +G G PD+ SYT +I+G ++
Sbjct: 152 LG-CIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 235 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 271
+A + EM+++G+LP VT+ ++ L ++ +
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 82/192 (42%), Gaps = 25/192 (13%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-RASLHPSERF---- 56
Y++LI G+CKI+R++ A EM GV P+++TYN++L G+ + R + E +
Sbjct: 549 YSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRIT 608
Query: 57 --------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQ 96
K +A ++F + + ++ + +F+I++ + +
Sbjct: 609 ESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRND 668
Query: 97 LSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFF 156
+ D G+ P TY + + + G +E+ ++L M NG + N
Sbjct: 669 EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 728
Query: 157 KEYRGRKDANGA 168
+E R + A
Sbjct: 729 RELLQRGEITRA 740
>sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein At1g74850,
chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1
Length = 862
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 129/260 (49%), Gaps = 10/260 (3%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
YT+LI + + R + + L M + P+++TYN ++N C R L +E +
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVIN-ACARGGLD----WEGLL- 232
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
+F EMR GI+PD+ +++ +L + + M + GI P + TYS +V
Sbjct: 233 ---GLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV 289
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
+ R+E +LLGEM G P +YN + Y AM ++ QM+ G C
Sbjct: 290 ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG-C 348
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
PN ++Y++L+ +F R D VR+++ ++K S PD +Y +LI E +KE
Sbjct: 349 TPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVT 408
Query: 242 YFVEMIEKGLLPQKVTFETL 261
F +M+E+ + P T+E +
Sbjct: 409 LFHDMVEENIEPDMETYEGI 428
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 6/216 (2%)
Query: 65 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCL 124
+VFDEM +G+ V S++ +++ Y R + + SL+ L+ MK + I P++ TY++V+
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA- 220
Query: 125 CSCGRIEDAEELLG---EMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
C+ G + D E LLG EM G+ P TYN R + A ++R M DG
Sbjct: 221 CARGGL-DWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN-DGGI 278
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
VP++ +Y+ L+ F L R++ V ++ ++ G PD+ SY +L+ + KEA
Sbjct: 279 VPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMG 338
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 277
F +M G P T+ L QS R+L
Sbjct: 339 VFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 131/308 (42%), Gaps = 28/308 (9%)
Query: 21 FLGEMIERGVEPNVVTYNVLLN-----GVCRRASL------------------HPSERFE 57
EM G++P++VTYN LL+ G+ A + H E F
Sbjct: 234 LFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFG 293
Query: 58 KTIRNAEKVFD---EMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTV 114
K +R EKV D EM G PD+TS++++L Y+++ + ++ + M+ G P
Sbjct: 294 K-LRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNA 352
Query: 115 ATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQ 174
TYS ++ GR +D +L EM + P A TYN + + + L+
Sbjct: 353 NTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD 412
Query: 175 MKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQ 234
M E+ + P+M +Y +I + R+I + + + P +YT +I +
Sbjct: 413 MVEENI-EPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAA 471
Query: 235 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 294
++EA F M E G P TF +L + +++ + +L + I + N
Sbjct: 472 LYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFN 531
Query: 295 YHFKPYRR 302
+ Y++
Sbjct: 532 AQIEAYKQ 539
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 123/274 (44%), Gaps = 16/274 (5%)
Query: 24 EMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 83
+M+E +EP++ TY ++ C + LH +A K+ M I P +++
Sbjct: 412 DMVEENIEPDMETYEGIIF-ACGKGGLH---------EDARKILQYMTANDIVPSSKAYT 461
Query: 84 IVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRN 143
V+ + +A + +L N M E G P++ T+ S++ G ++++E +L +V +
Sbjct: 462 GVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDS 521
Query: 144 GVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDM 203
G+ + +T+N + Y+ A+K Y M E C P+ + ++ ++ +D
Sbjct: 522 GIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDM-EKSRCDPDERTLEAVLSVYSFARLVDE 580
Query: 204 VREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 263
RE + ++K S + P + Y M++ + ++W + + EM+ + + +
Sbjct: 581 CREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIK 640
Query: 264 GLIQSDMLRTWRRLK---KKLDEESITFGSEFQN 294
G D W+ ++ KL+ E G F N
Sbjct: 641 GDYDDD--SNWQIVEYVLDKLNSEGCGLGIRFYN 672
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 126/288 (43%), Gaps = 32/288 (11%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH---------- 51
Y+ L+ + K+ R++ LGEM G P++ +YNVLL + S+
Sbjct: 285 YSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 52 -----PSERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQ 96
P+ + N ++F EM+ +PD +++I++ V+ +
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 97 LSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFF 156
+ + M E+ I P + TY ++ G EDA ++L M N + PS++ Y
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVI 464
Query: 157 KEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVRE---IWNDVKG 213
+ + A+ + M E G P++ +++ L+ F R +V+E I + +
Sbjct: 465 EAFGQAALYEEALVAFNTMHEVG-SNPSIETFHSLLYSFA---RGGLVKESEAILSRLVD 520
Query: 214 SGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 261
SG+ + D++ I + K++EA + +V+M + P + T E +
Sbjct: 521 SGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAV 568
Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 2/198 (1%)
Query: 76 EPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEE 135
+P+ ++I++ + R L+ + M +G+ +V +Y++++ GR E + E
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 136 LLGEMVRNGVCPSAETYNCFFKE-YRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGM 194
LL M + PS TYN RG D G + L+ +M+ +G+ P++ +YN L+
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI-QPDIVTYNTLLSA 256
Query: 195 FMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 254
D ++ + G+ PDL +Y+ L+ + ++ ++ C EM G LP
Sbjct: 257 CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD 316
Query: 255 KVTFETLYRGLIQSDMLR 272
++ L +S ++
Sbjct: 317 ITSYNVLLEAYAKSGSIK 334
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 57/114 (50%)
Query: 148 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREI 207
S + FKE+ GR D +++L++ M+ C PN H Y I+I + +D E+
Sbjct: 104 SLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEV 163
Query: 208 WNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 261
++++ G+ + SYT LI+ +++ + + M + + P +T+ T+
Sbjct: 164 FDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTV 217
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 113/280 (40%), Gaps = 20/280 (7%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+ SL+Y + + + +E L +++ G+ N T+N + + +FE+ +
Sbjct: 495 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIE------AYKQGGKFEEAV- 547
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
K + +M +PD + VL VYS A ++ MK I P++ Y ++
Sbjct: 548 ---KTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMML 604
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFK-EYRGRKDANGAMKLYRQMKEDGL 180
R +D ELL EM+ N V + K +Y + + ++ +G
Sbjct: 605 AVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEG- 663
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDS-----YTMLIHGLCEKQK 235
C + YN L+ L + + + N+ GL P+L +++ +H + E
Sbjct: 664 CGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMSEGGM 723
Query: 236 WKEACQYF---VEMIEKGLLPQKVTFETLYRGLIQSDMLR 272
+ + +M+ KG LPQ ++ L +S R
Sbjct: 724 YTALSVWLNDINDMLLKGDLPQLAVVVSVRGQLEKSSAAR 763
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 133/272 (48%), Gaps = 10/272 (3%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+T+L++G + N+ A + M+ +G +P++VTY ++NG+C+R P
Sbjct: 183 FTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG--EPDL------- 233
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A + ++M IE DV ++ ++ + + D N M+ KGI P V TY+ ++
Sbjct: 234 -ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
CLC+ GR DA LL +M+ + P +N + A KLY +M + C
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC 352
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P++ +YN LI F R++ E++ ++ GL + +YT LIHG + + A
Sbjct: 353 FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 412
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 273
F +M+ G+ P +T+ L GL + + T
Sbjct: 413 VFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 134/268 (50%), Gaps = 12/268 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y ++I G CK D+A L +M + +E +VV YN +++G+C+ K +
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKY----------KHMD 267
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
+A +F++M +GI+PDV +++ ++ + + L+ M EK I P + +++++
Sbjct: 268 DAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALI 327
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVC-PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
G++ +AE+L EMV++ C P YN K + K M+++R+M + GL
Sbjct: 328 DAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGL 387
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
V N +Y LI F D + ++ + G+ PD+ +Y +L+ GLC + A
Sbjct: 388 -VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL 446
Query: 241 QYFVEMIEKGLLPQKVTFETLYRGLIQS 268
F M ++ + VT+ T+ L ++
Sbjct: 447 VVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 130/267 (48%), Gaps = 14/267 (5%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+Y ++I G CK +D A +M +G++P+V TYN L++ +C
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW---------- 301
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKL--NFMKEKGICPTVATYS 118
+A ++ +M + I PD+ F+ ++ + + + + +KL +K K P V Y+
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK-LVEAEKLYDEMVKSKHCFPDVVAYN 360
Query: 119 SVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 178
+++K C R+E+ E+ EM + G+ + TY + +D + A +++QM D
Sbjct: 361 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 420
Query: 179 GLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKE 238
G+ P++ +YNIL+ ++ ++ ++ + D+ +YT +I LC+ K ++
Sbjct: 421 GVH-PDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVED 479
Query: 239 ACQYFVEMIEKGLLPQKVTFETLYRGL 265
F + KG+ P VT+ T+ G
Sbjct: 480 GWDLFCSLSLKGVKPNVVTYTTMMSGF 506
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 114/231 (49%), Gaps = 15/231 (6%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y +LI G+CK R++ EM +RG+ N VTY L++G + +
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ----------ARDCD 408
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
NA+ VF +M G+ PD+ +++I+L + +L +M+++ + + TY++++
Sbjct: 409 NAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEY--RGRKDANGAMKLYRQMKEDG 179
+ LC G++ED +L + GV P+ TY + +G K+ A L+ +MKEDG
Sbjct: 469 EALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA--LFVEMKEDG 526
Query: 180 LCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGL 230
+PN +YN LI + E+ +++ G D ++ ++ + L
Sbjct: 527 -PLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 129/299 (43%), Gaps = 46/299 (15%)
Query: 14 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMRVR 73
++D A G+M++ P++V ++ LL+ + + +F+ I E +M+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKM------NKFDLVISLGE----QMQNL 104
Query: 74 GIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDA 133
GI ++ ++SI ++ + R Q L+L L M + G P++ T +S++ C RI +A
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 134 EELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIG 193
L+ +MV G P T+ A+ A+ L +M G C P++ +Y +I
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVIN 223
Query: 194 MF-------MALN----------------------------RMDMVREIWNDVKGSGLGP 218
+ALN MD +++N ++ G+ P
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 219 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 277
D+ +Y LI LC +W +A + +M+EK + P V F L ++ L +L
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 128 bits (322), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 145/294 (49%), Gaps = 16/294 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y SLIYG+ K + +A L +M +G +PNV +Y +L++G C+ I
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK----------ID 441
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A V +EM G++P+ F+ ++ + + H+ +++ M KG P V T++S++
Sbjct: 442 EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 501
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
LC I+ A LL +M+ GV + TYN + R + A KL +M G
Sbjct: 502 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP 561
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
+ + +YN LI +D R ++ + G P S +LI+GLC +EA +
Sbjct: 562 LDEI-TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE 620
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKKK-LDEESITFGS 290
+ EM+ +G P VTF +L GL ++ D L +R+L+ + + +++TF +
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 146/303 (48%), Gaps = 16/303 (5%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+Y +LI+ K NR++ A + L EM G P+ T+N ++ G+C+ F++ I
Sbjct: 254 IYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK---------FDR-I 303
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
A K+ + M +RG PD ++ +++ + + + D + + P + ++++
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTL 359
Query: 121 VKCLCSCGRIEDAEELLGEMVRN-GVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDG 179
+ + GR++DA+ +L +MV + G+ P TYN Y A+++ M+ G
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 180 LCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEA 239
C PN++SY IL+ F L ++D + N++ GL P+ + LI C++ + EA
Sbjct: 420 -CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 240 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKP 299
+ F EM KG P TF +L GL + D ++ L + + E + + N
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 300 YRR 302
+ R
Sbjct: 539 FLR 541
Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 127/260 (48%), Gaps = 11/260 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
YT L+ G+CK+ +ID A L EM G++PN V +N L++ C+ E I
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK----------EHRIP 476
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A ++F EM +G +PDV +F+ ++ + + +L L M +G+ TY++++
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
G I++A +L+ EMV G TYN K + + A L+ +M DG
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA 596
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
N+ S NILI ++ E ++ G PD+ ++ LI+GLC + ++
Sbjct: 597 PSNI-SCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 242 YFVEMIEKGLLPQKVTFETL 261
F ++ +G+ P VTF TL
Sbjct: 656 MFRKLQAEGIPPDTVTFNTL 675
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 135/282 (47%), Gaps = 12/282 (4%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPSERFEKT 59
++ +LI+G+ R+D A+ L +M+ G+ P+V TYN L+ G + E
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK----------EGL 404
Query: 60 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSS 119
+ A +V +MR +G +P+V S++I++ + + + + + LN M G+ P ++
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 120 VVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDG 179
++ C RI +A E+ EM R G P T+N + A+ L R M +G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 180 LCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEA 239
+ V N +YN LI F+ + R++ N++ G D +Y LI GLC + +A
Sbjct: 525 V-VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKA 583
Query: 240 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 281
F +M+ G P ++ L GL +S M+ +K++
Sbjct: 584 RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 10/157 (6%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y SLI G C+ +D A +M+ G P+ ++ N+L+NG+CR + + F+K
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK--- 623
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
EM +RG PD+ +F+ +++ RA + + L ++ +GI P T+++++
Sbjct: 624 -------EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKE 158
LC G + DA LL E + +G P+ T++ +
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 24/239 (10%)
Query: 31 EPNVVTYNVLL----NGVCRRASLHPSERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 86
EP +YNV+L +G C + A VF +M R I P + +F +V+
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKV--------------AANVFYDMLSRKIPPTLFTFGVVM 224
Query: 87 HVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVC 146
+ ++ +L L M + G P Y +++ L C R+ +A +LL EM G
Sbjct: 225 KAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 284
Query: 147 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVRE 206
P AET+N N A K+ +M G P+ +Y L+ + R+D ++
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF-APDDITYGYLMNGLCKIGRVDAAKD 343
Query: 207 IWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK-GLLPQKVTFETLYRG 264
++ + P++ + LIHG + +A +M+ G++P T+ +L G
Sbjct: 344 LFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 398
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 2/206 (0%)
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGIC-PTVATYSS 119
+ +++ +M+ GI + F ++ Y +A P + + M+ C PT +Y+
Sbjct: 128 KTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNV 187
Query: 120 VVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDG 179
V++ L S + A + +M+ + P+ T+ K + + + A+ L R M + G
Sbjct: 188 VLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHG 247
Query: 180 LCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEA 239
CVPN Y LI NR++ ++ ++ G PD +++ +I GLC+ + EA
Sbjct: 248 -CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEA 306
Query: 240 CQYFVEMIEKGLLPQKVTFETLYRGL 265
+ M+ +G P +T+ L GL
Sbjct: 307 AKMVNRMLIRGFAPDDITYGYLMNGL 332
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 7/191 (3%)
Query: 105 MKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVC-PSAETYNCFFKEYRGRK 163
MK++GI + + S+++ G L+ EM C P+ ++YN +
Sbjct: 137 MKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGN 196
Query: 164 DANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSY 223
A ++ M + P + ++ +++ F A+N +D + D+ G P+ Y
Sbjct: 197 CHKVAANVFYDMLSRKI-PPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIY 255
Query: 224 TMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTW-----RRLK 278
LIH L + + EA Q EM G +P TF + GL + D + R L
Sbjct: 256 QTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI 315
Query: 279 KKLDEESITFG 289
+ + IT+G
Sbjct: 316 RGFAPDDITYG 326
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/150 (18%), Positives = 63/150 (42%)
Query: 116 TYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQM 175
Y ++ L + G + + LL +M G+ + ++Y +L +M
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 176 KEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQK 235
+ C P SYN+++ + ++ N + ++ D+ + P L ++ +++ C +
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 236 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 265
A +M + G +P V ++TL L
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSL 262
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 127 bits (320), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 149/319 (46%), Gaps = 31/319 (9%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSER------ 55
Y +LI G+CK+NRID A R L M + P+ VTYN+++ +C R L + +
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 56 -------------------FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQ 96
E + A K+ DEM RG++PD+ +++ ++ +
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 97 LSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFF 156
+ + + ++ KG P V +Y+ +++ L + G+ E+ E+L+ +M P+ TY+
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 157 KEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGL 216
AM L + MKE GL P+ +SY+ LI F R+D+ E + G
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGL-TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Query: 217 GPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-DMLRTWR 275
PD+ +Y ++ LC+ K +A + F ++ E G P ++ T++ L S D +R
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459
Query: 276 ----RLKKKLDEESITFGS 290
+ +D + IT+ S
Sbjct: 460 MILEMMSNGIDPDEITYNS 478
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 130/272 (47%), Gaps = 15/272 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
YT LI +D A + + EM+ RG++P++ TYN ++ G+C+ + +R + +R
Sbjct: 231 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV---DRAFEMVR 287
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
N E ++G EPDV S++I+L + + + M + P V TYS ++
Sbjct: 288 NLE-------LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEY--RGRKDANGAMKLYRQMKEDG 179
LC G+IE+A LL M G+ P A +Y+ + GR D A++ M DG
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV--AIEFLETMISDG 398
Query: 180 LCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEA 239
C+P++ +YN ++ + D EI+ + G P+ SY + L A
Sbjct: 399 -CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 240 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 271
+EM+ G+ P ++T+ ++ L + M+
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMV 489
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 133/270 (49%), Gaps = 17/270 (6%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y ++I G CK +D A + + +G EP+V++YN+LL RA L+ + E
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILL-----RALLNQGKWEE---- 316
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
EK+ +M +P+V ++SI++ R + + +++ L MKEKG+ P +Y ++
Sbjct: 317 -GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
C GR++ A E L M+ +G P YN A+ A++++ ++ E G C
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG-C 434
Query: 182 VPNMHSYNILIGMFMAL-NRMDMVREIWN--DVKGSGLGPDLDSYTMLIHGLCEKQKWKE 238
PN SYN MF AL + D +R + ++ +G+ PD +Y +I LC + E
Sbjct: 435 SPNSSSYNT---MFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDE 491
Query: 239 ACQYFVEMIEKGLLPQKVTFETLYRGLIQS 268
A + V+M P VT+ + G ++
Sbjct: 492 AFELLVDMRSCEFHPSVVTYNIVLLGFCKA 521
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 3 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRN 62
T LI G+ + I A R + E++E+ +P+V YN L+NG C+ I +
Sbjct: 128 TKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALINGFCKM----------NRIDD 176
Query: 63 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVK 122
A +V D MR + PD +++I++ + L+L LN + PTV TY+ +++
Sbjct: 177 ATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIE 236
Query: 123 CLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCV 182
G +++A +L+ EM+ G+ P TYN + + A ++ R ++ G C
Sbjct: 237 ATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG-CE 295
Query: 183 PNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQY 242
P++ SYNIL+ + + + ++ + P++ +Y++LI LC K +EA
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355
Query: 243 FVEMIEKGLLPQKVTFETL 261
M EKGL P +++ L
Sbjct: 356 LKLMKEKGLTPDAYSYDPL 374
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 129/296 (43%), Gaps = 45/296 (15%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y L+ + + E+ + +M +PNVVTY++L+ +CR + I
Sbjct: 301 YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR----------DGKIE 350
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A + M+ +G+ PD S+ ++ + R + ++++ L M G P + Y++V+
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL- 180
LC G+ + A E+ G++ G P++ +YN F D A+ + +M +G+
Sbjct: 411 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 470
Query: 181 -----------CV----------------------PNMHSYNILIGMFMALNRMDMVREI 207
C+ P++ +YNI++ F +R++ +
Sbjct: 471 PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV 530
Query: 208 WNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 263
+ G+G P+ +YT+LI G+ EA + +++ + + +F+ L+R
Sbjct: 531 LESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISE-YSFKRLHR 585
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 2/187 (1%)
Query: 85 VLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNG 144
+ H R+ SL L M KG P V + ++K + I A ++ E++
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKF 153
Query: 145 VCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMV 204
P YN + + A ++ +M+ P+ +YNI+IG + ++D+
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFS-PDTVTYNIMIGSLCSRGKLDLA 212
Query: 205 REIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 264
++ N + P + +YT+LI + EA + EM+ +GL P T+ T+ RG
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 265 LIQSDML 271
+ + M+
Sbjct: 273 MCKEGMV 279
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 73/142 (51%), Gaps = 14/142 (9%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
M+++L W ++I L EM+ G++P+ +TYN +++ +CR E +
Sbjct: 444 MFSAL---WSSGDKIRALHMIL-EMMSNGIDPDEITYNSMISCLCR----------EGMV 489
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
A ++ +MR P V +++IVL + +AH+ + +++ L M G P TY+ +
Sbjct: 490 DEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVL 549
Query: 121 VKCLCSCGRIEDAEELLGEMVR 142
++ + G +A EL ++VR
Sbjct: 550 IEGIGFAGYRAEAMELANDLVR 571
>sp|Q9LFQ4|PP383_ARATH Pentatricopeptide repeat-containing protein At5g15010,
mitochondrial OS=Arabidopsis thaliana GN=At5g15010 PE=2
SV=2
Length = 572
Score = 127 bits (319), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 144/275 (52%), Gaps = 26/275 (9%)
Query: 2 YTSLIYGWCK-INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+ ++ GWC I AER EM GV+ +VV+Y+ +++ + SL+
Sbjct: 269 FNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLN--------- 319
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKE-KGICPTVATYSS 119
K+FD M+ IEPD ++ V+H ++A + + + M+E KGI P V TY+S
Sbjct: 320 -KVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNS 378
Query: 120 VVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDG 179
++K LC + E+A+++ EM+ G+ P+ TY+ F + R ++ +L +M++ G
Sbjct: 379 LIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEV---FELLAKMRKMG 435
Query: 180 LCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEA 239
C P + +Y +LI D V +W+++K +GPDL SY ++IHGL K +EA
Sbjct: 436 -CEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEA 494
Query: 240 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTW 274
Y+ EM +KG+ P + DM+++W
Sbjct: 495 YGYYKEMKDKGMRPNENV----------EDMIQSW 519
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 23/188 (12%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIE-RGVEPNVVTYNVLLNGVCR------------- 46
+Y ++++ K + + A + M E +G+EPNVVTYN L+ +C+
Sbjct: 339 VYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDE 398
Query: 47 --RASLHPSER----FEKTIRNAEKVFD---EMRVRGIEPDVTSFSIVLHVYSRAHQPQL 97
L P+ R F + +R E+VF+ +MR G EP V ++ +++ R
Sbjct: 399 MLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDN 458
Query: 98 SLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFK 157
L + MKEK + P +++Y ++ L G+IE+A EM G+ P+ +
Sbjct: 459 VLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQS 518
Query: 158 EYRGRKDA 165
+ G++ A
Sbjct: 519 WFSGKQYA 526
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 127 bits (319), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 147/304 (48%), Gaps = 22/304 (7%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR----RASLHPSERFE 57
Y L+ CK N++D A++ L EM +G P+ V+Y +++ +C + +ERFE
Sbjct: 184 YNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE 243
Query: 58 KTI----------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDK 101
+ + A ++ EM +GI P+V S+S +++V + Q +L+
Sbjct: 244 PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 102 LNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRN-GVCPSAETYNCFFKEYR 160
L M ++G P + T SS+VK G DA +L +M+R G+ P+ YN + +
Sbjct: 304 LTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFC 363
Query: 161 GRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDL 220
+ A+ ++ M+E G C PN+ +Y LI F +D IWN + SG P++
Sbjct: 364 SHGNIVKAVSVFSHMEEIG-CSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV 422
Query: 221 DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKK 280
YT ++ LC K+KEA M ++ P TF +GL + L ++ ++
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 281 LDEE 284
++++
Sbjct: 483 MEQQ 486
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 128/286 (44%), Gaps = 26/286 (9%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS------------ 49
Y++LI C +I++A FL +M++RG PN+ T + L+ G R +
Sbjct: 284 YSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI 343
Query: 50 ----LHPSERFEKT----------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQP 95
L P+ T I A VF M G P++ ++ +++ +++
Sbjct: 344 RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSL 403
Query: 96 QLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCF 155
++ N M G CP V Y+++V+ LC + ++AE L+ M + PS T+N F
Sbjct: 404 DGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAF 463
Query: 156 FKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSG 215
K + A K++RQM++ C PN+ +YN L+ NR++ + ++ G
Sbjct: 464 IKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 523
Query: 216 LGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 261
+ +Y L+HG C A Q +M+ G P ++T +
Sbjct: 524 VEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMI 569
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 127/297 (42%), Gaps = 44/297 (14%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
++ S+I + ++ + A + E G +P+V YN +L+ + E I
Sbjct: 113 LFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLG----------ENRI 162
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
+ V+ +M+ G EP+V +++++L + ++ + L M KG CP +Y++V
Sbjct: 163 QMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTV 222
Query: 121 VKCLCSCGRIED------------------------------AEELLGEMVRNGVCPSAE 150
+ +C G +++ A EL+ EMV G+ P+
Sbjct: 223 ISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVI 282
Query: 151 TYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILI-GMFMALNRMDMVREIWN 209
+Y+ A QM + G C PN+++ + L+ G F+ D + ++WN
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRG-CHPNIYTLSSLVKGCFLRGTTFDAL-DLWN 340
Query: 210 D-VKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 265
++G GL P++ +Y L+ G C +A F M E G P T+ +L G
Sbjct: 341 QMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGF 397
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 125/310 (40%), Gaps = 49/310 (15%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y +L+ G+C I A M E G PN+ TY L+NG +R SL
Sbjct: 355 YNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLD---------- 404
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A ++++M G P+V ++ ++ R + + + + M ++ P+V T+++ +
Sbjct: 405 GAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFI 464
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCP---------------------------------- 147
K LC GR++ AE++ +M + CP
Sbjct: 465 KGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGV 524
Query: 148 --SAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVR 205
S+ TYN A++L +M DG P+ + N++I + + +
Sbjct: 525 EWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKS-PDEITMNMIILAYCKQGKAERAA 583
Query: 206 EIWNDVKGS--GLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 263
++ + V PD+ SYT +I GLC ++ MI G++P T+ L
Sbjct: 584 QMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Query: 264 GLIQSDMLRT 273
I D++R
Sbjct: 644 CFILDDIVRA 653
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 15/230 (6%)
Query: 51 HPSERFEKTIR---------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDK 101
H FE IR + + + +M+++G F V+ VY + + +++
Sbjct: 74 HTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEM 133
Query: 102 LNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRG 161
+KE G P+V Y+ V+ L RI+ + +M R+G P+ TYN K
Sbjct: 134 FYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCK 193
Query: 162 RKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLD 221
+GA KL +M G C P+ SY +I + + RE+ P +
Sbjct: 194 NNKVDGAKKLLVEMSNKG-CCPDAVSYTTVISSMCEVGLVKEGREL-----AERFEPVVS 247
Query: 222 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 271
Y LI+GLC++ +K A + EM+EKG+ P +++ TL L S +
Sbjct: 248 VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 1/170 (0%)
Query: 113 TVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLY 172
T T+ +++ L G+++ + LL +M G S + + YR A A++++
Sbjct: 75 TPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMF 134
Query: 173 RQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCE 232
++KE G C P++ YN ++ + NR+ M+ ++ D+K G P++ +Y +L+ LC+
Sbjct: 135 YRIKEFG-CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCK 193
Query: 233 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 282
K A + VEM KG P V++ T+ + + +++ R L ++ +
Sbjct: 194 NNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE 243
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 10/219 (4%)
Query: 63 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVK 122
A ++F ++ G +P V ++ VL ++ Q+ MK G P V TY+ ++K
Sbjct: 130 AVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLK 189
Query: 123 CLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCV 182
LC +++ A++LL EM G CP A +Y G +K R++ E
Sbjct: 190 ALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSM----CEVGLVKEGRELAER--FE 243
Query: 183 PNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQY 242
P + YN LI + E+ ++ G+ P++ SY+ LI+ LC + + A +
Sbjct: 244 PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 243 FVEMIEKGLLPQKVTFETLYRGLI----QSDMLRTWRRL 277
+M+++G P T +L +G D L W ++
Sbjct: 304 LTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342
>sp|Q9FX35|PP117_ARATH Pentatricopeptide repeat-containing protein At1g73400,
mitochondrial OS=Arabidopsis thaliana GN=At1g73400 PE=2
SV=2
Length = 568
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 128/259 (49%), Gaps = 15/259 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+ L +GWC++ A + L EMIE G +P TY ++ C+ +
Sbjct: 271 FNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAG----------MVD 320
Query: 62 NAEKVFDEMRVRGIE---PDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYS 118
A +FD M +G P +F++++ ++ + + + + M G P V+TY
Sbjct: 321 EAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYK 380
Query: 119 SVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 178
V++ +C ++++A + L EM G P TYNCF + + + A+KLY +M E
Sbjct: 381 DVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVE- 439
Query: 179 GLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKE 238
C P++ +YN+LI MF ++ D W ++ D+++Y +I+GL + + KE
Sbjct: 440 SRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKE 499
Query: 239 ACQYFVEMIEKGL-LPQKV 256
AC E++ KGL LP +V
Sbjct: 500 ACFLLEEVVNKGLKLPYRV 518
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 118/263 (44%), Gaps = 21/263 (7%)
Query: 26 IERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIV 85
I +P + +N+LL+ +C+ ++ E + MR R ++PD +F+++
Sbjct: 226 IRVKTQPEINAFNMLLDALCKCG----------LVKEGEALLRRMRHR-VKPDANTFNVL 274
Query: 86 LHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGV 145
+ R P+ ++ L M E G P TY + + C G +++A +L M+ G
Sbjct: 275 FFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGS 334
Query: 146 C---PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSY-NILIGMFMALNRM 201
P+A+T+ A +L +M G C+P++ +Y +++ GM MA ++
Sbjct: 335 AVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTG-CLPDVSTYKDVIEGMCMA-EKV 392
Query: 202 DMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 261
D + +++ G PD+ +Y + LCE +K EA + + M+E P T+ L
Sbjct: 393 DEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNML 452
Query: 262 YRGLIQSD----MLRTWRRLKKK 280
+ D TW + K+
Sbjct: 453 ISMFFEMDDPDGAFNTWTEMDKR 475
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 76/176 (43%), Gaps = 10/176 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y +I G C ++D A +FL EM +G P++VTYN L +C +
Sbjct: 379 YKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCE----------NRKTD 428
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A K++ M P V ++++++ ++ P + + M ++ V TY +++
Sbjct: 429 EALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMI 488
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 177
L C R ++A LL E+V G+ ++ F + K+ MK+
Sbjct: 489 NGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKK 544
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 130/267 (48%), Gaps = 11/267 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y S+I G+ K+ R+D F EM + EP+V+TYN L+N C+ L F
Sbjct: 300 YNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEF----- 354
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
+ EM+ G++P+V S+S ++ + + Q ++ M+ G+ P TY+S++
Sbjct: 355 -----YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 409
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
C G + DA L EM++ GV + TY + A +L+ +M G+
Sbjct: 410 DANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV- 468
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
+PN+ SYN LI F+ MD E+ N++KG G+ PDL Y I GLC +K + A
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 528
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQS 268
EM E G+ + + TL +S
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKS 555
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 134/265 (50%), Gaps = 11/265 (4%)
Query: 4 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNA 63
L++ + K+ + D +RF +MI G P V TYN++++ +C+ E + A
Sbjct: 232 GLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCK----------EGDVEAA 281
Query: 64 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKC 123
+F+EM+ RG+ PD +++ ++ + + + ++ MK+ P V TY++++ C
Sbjct: 282 RGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINC 341
Query: 124 LCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVP 183
C G++ E EM NG+ P+ +Y+ + A+K Y M+ GL VP
Sbjct: 342 FCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL-VP 400
Query: 184 NMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYF 243
N ++Y LI + + + N++ G+ ++ +YT LI GLC+ ++ KEA + F
Sbjct: 401 NEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF 460
Query: 244 VEMIEKGLLPQKVTFETLYRGLIQS 268
+M G++P ++ L G +++
Sbjct: 461 GKMDTAGVIPNLASYNALIHGFVKA 485
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 145/286 (50%), Gaps = 18/286 (6%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
YTSLI CKI + A R EM++ GVE NVVTY L++G+C +ER ++
Sbjct: 405 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC------DAER----MK 454
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
AE++F +M G+ P++ S++ ++H + +A +L+ LN +K +GI P + Y + +
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
LCS +IE A+ ++ EM G+ ++ Y Y + + L +MKE +
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574
Query: 182 VPNMHSYNILIGMF----MALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWK 237
V + ++ +LI + +D I ND GL + +T +I GLC+ + +
Sbjct: 575 V-TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF---GLQANAAIFTAMIDGLCKDNQVE 630
Query: 238 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 283
A F +M++KGL+P + + +L G + + L+ K+ E
Sbjct: 631 AATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 676
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 132/270 (48%), Gaps = 11/270 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y +LI +CK ++ + F EM G++PNVV+Y+ L++ C+ E ++
Sbjct: 335 YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCK----------EGMMQ 384
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A K + +MR G+ P+ +++ ++ + + N M + G+ V TY++++
Sbjct: 385 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALI 444
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
LC R+++AEEL G+M GV P+ +YN + K+ + A++L ++K G+
Sbjct: 445 DGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI- 503
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P++ Y I +L +++ + + N++K G+ + YT L+ + E
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 563
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDML 271
EM E + VTF L GL ++ ++
Sbjct: 564 LLDEMKELDIEVTVVTFCVLIDGLCKNKLV 593
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 106/205 (51%), Gaps = 7/205 (3%)
Query: 60 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKE---KGICPTVAT 116
+ A + F +M+ + P S + +LH +++ + D F K+ G PTV T
Sbjct: 208 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD---DVKRFFKDMIGAGARPTVFT 264
Query: 117 YSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMK 176
Y+ ++ C+C G +E A L EM G+ P TYN + + + + +MK
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 324
Query: 177 EDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKW 236
D C P++ +YN LI F ++ + E + ++KG+GL P++ SY+ L+ C++
Sbjct: 325 -DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 383
Query: 237 KEACQYFVEMIEKGLLPQKVTFETL 261
++A +++V+M GL+P + T+ +L
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSL 408
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 123/257 (47%), Gaps = 14/257 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y +LI+G+ K +D A L E+ RG++P+++ Y + G+C EK I
Sbjct: 475 YNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS---------LEK-IE 524
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A+ V +EM+ GI+ + ++ ++ Y ++ P L L+ MKE I TV T+ ++
Sbjct: 525 AAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLI 584
Query: 122 KCLCSCGRIEDAEELLGEMVRN-GVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
LC + A + + + G+ +A + A L+ QM + GL
Sbjct: 585 DGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGL 644
Query: 181 CVPNMHSYNILI-GMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEA 239
VP+ +Y L+ G F N ++ + + + + G+ DL +YT L+ GL + ++A
Sbjct: 645 -VPDRTAYTSLMDGNFKQGNVLEAL-ALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKA 702
Query: 240 CQYFVEMIEKGLLPQKV 256
+ EMI +G+ P +V
Sbjct: 703 RSFLEEMIGEGIHPDEV 719
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 102/220 (46%), Gaps = 12/220 (5%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+Y + I+G C + +I+ A+ + EM E G++ N + Y L++ + S +P+E
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK--SGNPTEGLH--- 563
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLN-FMKEKGICPTVATYSS 119
+ DEM+ IE V +F +++ + ++D N + G+ A +++
Sbjct: 564 -----LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTA 618
Query: 120 VVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDG 179
++ LC ++E A L +MV+ G+ P Y + + A+ L +M E G
Sbjct: 619 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 678
Query: 180 LCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPD 219
+ + ++ +Y L+ N++ R ++ G G+ PD
Sbjct: 679 MKL-DLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 17/188 (9%)
Query: 94 QPQLSLDKLNF-MKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMV----------- 141
P+L+ + M G +V +Y V L DA +L EMV
Sbjct: 121 DPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDV 180
Query: 142 ----RNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMA 197
RN P ++ F A++ + +MK + P S N L+ F
Sbjct: 181 LWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRV-FPKTRSCNGLLHRFAK 239
Query: 198 LNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 257
L + D V+ + D+ G+G P + +Y ++I +C++ + A F EM +GL+P VT
Sbjct: 240 LGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVT 299
Query: 258 FETLYRGL 265
+ ++ G
Sbjct: 300 YNSMIDGF 307
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 140/283 (49%), Gaps = 11/283 (3%)
Query: 4 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNA 63
+LI +I +++A E+ GV NV T N+++N +C+ + F
Sbjct: 205 ALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTF------- 257
Query: 64 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKC 123
+++ +G+ PD+ +++ ++ YS + + + +N M KG P V TY++V+
Sbjct: 258 ---LSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVING 314
Query: 124 LCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVP 183
LC G+ E A+E+ EM+R+G+ P + TY E + D K++ M+ + VP
Sbjct: 315 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDV-VP 373
Query: 184 NMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYF 243
++ ++ ++ +F +D +N VK +GL PD YT+LI G C K A
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 244 VEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 286
EM+++G VT+ T+ GL + ML +L ++ E ++
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Score = 121 bits (304), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 154/321 (47%), Gaps = 32/321 (9%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERF--EK 58
+YT LI G+C+ I +A EM+++G +VVTYN +L+G+C+R L +++ E
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 59 T-----------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQP 95
T ++NA ++F +M+ + I DV +++ +L + +
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 96 QLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCF 155
+ + M K I PT +YS +V LCS G + +A + EM+ + P+ N
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 156 FKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMD----MVREIWNDV 211
K Y +A+ +M +G VP+ SYN LI F+ M +V+++ +
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGF-VPDCISYNTLIYGFVREENMSKAFGLVKKM--EE 648
Query: 212 KGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 271
+ GL PD+ +Y ++HG C + + KEA +MIE+G+ P + T+ + G + D L
Sbjct: 649 EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNL 708
Query: 272 RTWRRLKKKLDEESITFGSEF 292
R+ ++ + + +F
Sbjct: 709 TEAFRIHDEMLQRGFSPDDKF 729
Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 135/302 (44%), Gaps = 46/302 (15%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y ++I G CK + + A+ EM+ G+ P+ TY LL C++ +
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD----------VV 357
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
EKVF +MR R + PD+ FS ++ +++R+ +L N +KE G+ P Y+ ++
Sbjct: 358 ETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRK------------------ 163
+ C G I A L EM++ G TYN RK
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 164 -----------------DANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVRE 206
+ AM+L+++MKE + + ++ +YN L+ F + +D +E
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL-DVVTYNTLLDGFGKVGDIDTAKE 536
Query: 207 IWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 266
IW D+ + P SY++L++ LC K EA + + EMI K + P + ++ +G
Sbjct: 537 IWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYC 596
Query: 267 QS 268
+S
Sbjct: 597 RS 598
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 82 FSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMV 141
F +++ Y +A + + + + ++ KG ++ ++++ L G +E A + E+
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 142 RNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRM 201
R+GV + T N Q++E G+ P++ +YN LI + + M
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGV-YPDIVTYNTLISAYSSKGLM 286
Query: 202 DMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 261
+ E+ N + G G P + +Y +I+GLC+ K++ A + F EM+ GL P T+ +L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 1/204 (0%)
Query: 58 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATY 117
+ +R A + F +R +G + + + ++ R +L+ + G+ V T
Sbjct: 179 RKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTL 238
Query: 118 SSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 177
+ +V LC G++E L ++ GV P TYN Y + A +L M
Sbjct: 239 NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG 298
Query: 178 DGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWK 237
G P +++YN +I + + +E++ ++ SGL PD +Y L+ C+K
Sbjct: 299 KGFS-PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVV 357
Query: 238 EACQYFVEMIEKGLLPQKVTFETL 261
E + F +M + ++P V F ++
Sbjct: 358 ETEKVFSDMRSRDVVPDLVCFSSM 381
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 82/166 (49%), Gaps = 18/166 (10%)
Query: 113 TVATYSSVVKCLCSCGRIEDAEELLGEMVR-NGV---------------CPSAET-YNCF 155
T + S+++ L GR+ DA+ L M+R +GV C S ++ ++
Sbjct: 112 TSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLL 171
Query: 156 FKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSG 215
+ Y + A + + ++ G V ++ + N LIG + + +++ ++ ++ SG
Sbjct: 172 IRTYVQARKLREAHEAFTLLRSKGFTV-SIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 216 LGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 261
+G ++ + ++++ LC+ K ++ + ++ EKG+ P VT+ TL
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTL 276
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 133/295 (45%), Gaps = 45/295 (15%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLN------------------- 42
YTSLI + R A +M E G +P ++TYNV+LN
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM 270
Query: 43 ---GV-------------CRRASLHPSERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 86
G+ C+R SLH + A +VF+EM+ G D +++ +L
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLH---------QEAAQVFEEMKAAGFSYDKVTYNALL 321
Query: 87 HVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVC 146
VY ++H+P+ ++ LN M G P++ TY+S++ G +++A EL +M G
Sbjct: 322 DVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK 381
Query: 147 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVRE 206
P TY + AM ++ +M+ G C PN+ ++N I M+ + + +
Sbjct: 382 PDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 207 IWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 261
I++++ GL PD+ ++ L+ + E F EM G +P++ TF TL
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL 495
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 117/244 (47%), Gaps = 12/244 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y SL++ + I + E+ +EP V L+ VC + L P
Sbjct: 562 YCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLV-LVCSKCDLLPE-------- 612
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
AE+ F E++ RG PD+T+ + ++ +Y R + L++MKE+G P++ATY+S++
Sbjct: 613 -AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
+EE+L E++ G+ P +YN Y A +++ +M+ G+
Sbjct: 672 YMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGI- 730
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
VP++ +YN IG + A + + + + G P+ ++Y ++ G C+ + EA +
Sbjct: 731 VPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA-K 789
Query: 242 YFVE 245
FVE
Sbjct: 790 LFVE 793
Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 11/209 (5%)
Query: 4 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNA 63
+L+ K + + AER E+ ERG P++ T N +++ RR + + A
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRR----------QMVAKA 648
Query: 64 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKC 123
V D M+ RG P + +++ +++++SR+ S + L + KGI P + +Y++V+
Sbjct: 649 NGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYA 708
Query: 124 LCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVP 183
C R+ DA + EM +G+ P TYN F Y A+ + R M + G C P
Sbjct: 709 YCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHG-CRP 767
Query: 184 NMHSYNILIGMFMALNRMDMVREIWNDVK 212
N ++YN ++ + LNR D + D++
Sbjct: 768 NQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 107/260 (41%), Gaps = 11/260 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+ +LI + + + A M++ GV P++ TYN +L + R SE
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE------- 544
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
KV EM +P+ ++ +LH Y+ + L + I P ++V
Sbjct: 545 ---KVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLV 601
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
C + +AE E+ G P T N Y R+ A + MKE G
Sbjct: 602 LVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGF- 660
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P+M +YN L+ M EI ++ G+ PD+ SY +I+ C + ++A +
Sbjct: 661 TPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASR 720
Query: 242 YFVEMIEKGLLPQKVTFETL 261
F EM G++P +T+ T
Sbjct: 721 IFSEMRNSGIVPDVITYNTF 740
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 124/321 (38%), Gaps = 63/321 (19%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y SLI + + +D A +M E+G +P+V TY LL+G R + + + +R
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 62 NAE-------------------------KVFDEMRVRGIEPDVTS--------------- 81
NA K+FDE+ V G+ PD+ +
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 82 --------------------FSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
F+ ++ YSR + ++ M + G+ P ++TY++V+
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVC-PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
L G E +E++L EM +G C P+ TY Y K+ G M + G+
Sbjct: 532 AALARGGMWEQSEKVLAEM-EDGRCKPNELTYCSLLHAYANGKEI-GLMHSLAEEVYSGV 589
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
P L+ + + + ++++K G PD+ + ++ +Q +A
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKAN 649
Query: 241 QYFVEMIEKGLLPQKVTFETL 261
M E+G P T+ +L
Sbjct: 650 GVLDYMKERGFTPSMATYNSL 670
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 96/209 (45%), Gaps = 4/209 (1%)
Query: 78 DVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELL 137
D + +I++ + + + + + N ++E G V +Y+S++ + GR +A +
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 138 GEMVRNGVCPSAETYNCFFKEYRGRKDA--NGAMKLYRQMKEDGLCVPNMHSYNILIGMF 195
+M +G P+ TYN + G+ N L +MK DG+ P+ ++YN LI
Sbjct: 232 KKMEEDGCKPTLITYNVILNVF-GKMGTPWNKITSLVEKMKSDGIA-PDAYTYNTLITCC 289
Query: 196 MALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 255
+ +++ ++K +G D +Y L+ + + KEA + EM+ G P
Sbjct: 290 KRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSI 349
Query: 256 VTFETLYRGLIQSDMLRTWRRLKKKLDEE 284
VT+ +L + ML LK ++ E+
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEK 378
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 96/210 (45%), Gaps = 2/210 (0%)
Query: 57 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVAT 116
E + +A +F+ ++ G DV S++ ++ ++ + + + +++ M+E G PT+ T
Sbjct: 186 EGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLIT 245
Query: 117 YSSVVKCLCSCGRI-EDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQM 175
Y+ ++ G L+ +M +G+ P A TYN + A +++ +M
Sbjct: 246 YNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEM 305
Query: 176 KEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQK 235
K G + +YN L+ ++ +R ++ N++ +G P + +Y LI
Sbjct: 306 KAAGFSYDKV-TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM 364
Query: 236 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 265
EA + +M EKG P T+ TL G
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Score = 31.6 bits (70), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 35/98 (35%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNV---------------------- 39
Y ++IY +C+ R+ A R EM G+ P+V+TYN
Sbjct: 702 YNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMI 761
Query: 40 -------------LLNGVCRRASLHPSERFEKTIRNAE 64
+++G C+ ++ F + +RN +
Sbjct: 762 KHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLD 799
>sp|Q9FZ19|PPR5_ARATH Putative pentatricopeptide repeat-containing protein At1g02420
OS=Arabidopsis thaliana GN=At1g02420 PE=3 SV=2
Length = 491
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 126/234 (53%), Gaps = 11/234 (4%)
Query: 28 RGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH 87
+G++P+VVTYN L++ C+ ++ I A K+ D+MR PDV +++ V+
Sbjct: 240 KGLKPDVVTYNSLIDVYCK----------DREIEKAYKLIDKMREEEETPDVITYTTVIG 289
Query: 88 VYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCP 147
QP + + L MKE G P VA Y++ ++ C R+ DA++L+ EMV+ G+ P
Sbjct: 290 GLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSP 349
Query: 148 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREI 207
+A TYN FF+ D + +LY +M + C+PN S LI MF ++DM +
Sbjct: 350 NATTYNLFFRVLSLANDLGRSWELYVRMLGNE-CLPNTQSCMFLIKMFKRHEKVDMAMRL 408
Query: 208 WNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 261
W D+ G G +L+ LC+ K +EA + +EM+EKG P V+F+ +
Sbjct: 409 WEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 2/132 (1%)
Query: 144 GVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDM 203
G+ P TYN Y ++ A KL +M+E+ P++ +Y +IG + + D
Sbjct: 241 GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEE-ETPDVITYTTVIGGLGLIGQPDK 299
Query: 204 VREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 263
RE+ ++K G PD+ +Y I C ++ +A + EM++KGL P T+ +R
Sbjct: 300 AREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFR 359
Query: 264 GL-IQSDMLRTW 274
L + +D+ R+W
Sbjct: 360 VLSLANDLGRSW 371
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 128/263 (48%), Gaps = 11/263 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y SLI G K R+D A FL EM+E G++PN TY ++G + ++++ K
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVK--- 546
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
EMR G+ P+ + +++ Y + + + M ++GI TY+ ++
Sbjct: 547 -------EMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
L +++DAEE+ EM G+ P +Y + + A ++ +M E+GL
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL- 658
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
PN+ YN+L+G F ++ +E+ +++ GL P+ +Y +I G C+ EA +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 242 YFVEMIEKGLLPQKVTFETLYRG 264
F EM KGL+P + TL G
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDG 741
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 143/320 (44%), Gaps = 49/320 (15%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y SLI G+C+ + L EM +R + + TY ++ G+C L
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD---------- 434
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A + EM G P+V ++ ++ + + + ++ L MKE+GI P + Y+S++
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
L R+++A L EMV NG+ P+A TY F Y + A K ++M+E G+
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV- 553
Query: 182 VPN-----------------------------------MHSYNILIGMFMALNRMDMVRE 206
+PN +Y +L+ +++D E
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 207 IWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 266
I+ +++G G+ PD+ SY +LI+G + ++A F EM+E+GL P + + L G
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 267 QSDMLRTWRRLKKKLDEESI 286
+S + + L LDE S+
Sbjct: 674 RSGEIEKAKEL---LDEMSV 690
Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 30/291 (10%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERF----- 56
Y LI G CKI R++ A+ L EM GV + TY++L++G+ + + ++
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 57 --------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQ 96
E + A+ +FD M G+ P +++ ++ Y R +
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 97 LSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFF 156
+ L MK++ I + TY +VVK +CS G ++ A ++ EM+ +G P+ Y
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 157 KEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGL 216
K + AM++ ++MKE G+ P++ YN LI RMD R ++ +GL
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIA-PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 217 GPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 267
P+ +Y I G E ++ A +Y EM E G+LP KV L GLI
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV----LCTGLIN 565
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 130/277 (46%), Gaps = 11/277 (3%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+YT+LI + + +R A R L EM E+G+ P++ YN L+ G+ + + + F
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF---- 509
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
EM G++P+ ++ + Y A + + + M+E G+ P + +
Sbjct: 510 ------LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
+ C G++ +A MV G+ A+TY + A +++R+M+ G+
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
P++ SY +LI F L M I++++ GL P++ Y ML+ G C + ++A
Sbjct: 624 A-PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 241 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 277
+ EM KGL P VT+ T+ G +S L RL
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 132/299 (44%), Gaps = 47/299 (15%)
Query: 3 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRN 62
T LI +CK ++ A M+++G+ + TY VL+NG+ + + +
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN----------DKVDD 610
Query: 63 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVK 122
AE++F EMR +GI PDV S+ ++++ +S+ Q + + M E+G+ P V Y+ ++
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 123 CLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL-- 180
C G IE A+ELL EM G+ P+A TY Y D A +L+ +MK GL
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 181 -------------------------------CVPNMHSYNILIGMFMALNRMDMVREIWN 209
C + +N LI + ++ E+ N
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLN 790
Query: 210 DVKGSGLG----PDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 264
+ P+ +Y ++I LC++ + A + F +M L+P +T+ +L G
Sbjct: 791 RLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 14/272 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y LI G+ K+ + A EM+E G+ PNV+ YN+LL G CR I
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE----------IE 679
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A+++ DEM V+G+ P+ ++ ++ Y ++ + + MK KG+ P Y+++V
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFK-EYRGRKDANGAMKLYRQMKE--D 178
C +E A + G + G S +N ++ K L R M D
Sbjct: 740 DGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFD 798
Query: 179 GLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKE 238
PN +YNI+I ++ +E+++ ++ + L P + +YT L++G + + E
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAE 858
Query: 239 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 270
F E I G+ P + + + ++ M
Sbjct: 859 MFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 26/294 (8%)
Query: 15 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI-------------- 60
+D A + MI +G+ P TY+VL++G+C+ L ++ +
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 61 --------RNAEK---VFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKG 109
RNA+ + EM GI + + V S+ + + + M G
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 110 ICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAM 169
+ P Y+S+++ C + ELL EM + + S TY K D +GA
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 170 KLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHG 229
+ ++M G C PN+ Y LI F+ +R + ++K G+ PD+ Y LI G
Sbjct: 438 NIVKEMIASG-CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 230 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 283
L + ++ EA + VEM+E GL P T+ G I++ + + K++ E
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 113/261 (43%), Gaps = 35/261 (13%)
Query: 13 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMRV 72
NR+D+ M+ER V +V TY++L+ CR ++ + + EK F
Sbjct: 200 NRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGK---DVLFKTEKEF----- 251
Query: 73 RGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKE----KGICPTVATYSSVVKCLCSCG 128
L++D +KE KG+ P TY ++ LC
Sbjct: 252 --------------------RTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIK 291
Query: 129 RIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCV-PNMHS 187
R+EDA+ LL EM GV TY+ ++A+ A L +M G+ + P M
Sbjct: 292 RLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYM-- 349
Query: 188 YNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMI 247
Y+ I + M+ + +++ + SGL P +Y LI G C ++ ++ + VEM
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMK 409
Query: 248 EKGLLPQKVTFETLYRGLIQS 268
++ ++ T+ T+ +G+ S
Sbjct: 410 KRNIVISPYTYGTVVKGMCSS 430
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 105/262 (40%), Gaps = 32/262 (12%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--------------- 46
Y ++I G+CK + A R EM +G+ P+ Y L++G CR
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK 759
Query: 47 ---RASLHPSE-------RFEKTIRNAE---KVFDEMRVRGIEPDVTSFSIVLHVYSRAH 93
+S P +F KT E ++ D R +P+ +++I++ +
Sbjct: 760 KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819
Query: 94 QPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETY- 152
+ + + + M+ + PTV TY+S++ GR + + E + G+ P Y
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879
Query: 153 ---NCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWN 209
N F KE K +++ + D C ++ + L+ F + M++ ++
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVME 939
Query: 210 DVKGSGLGPDLDSYTMLIHGLC 231
++ PD + LI+ C
Sbjct: 940 NMVRLQYIPDSATVIELINESC 961
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 132/264 (50%), Gaps = 11/264 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y ++ CK + +A L +M ER ++ + V Y+++++G+C+ SL
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD---------- 280
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
NA +F+EM ++GI ++ +++I++ + A + L M ++ I P V T+S ++
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
G++ +AEEL EM+ G+ P TY + + A ++ M G C
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG-C 399
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
PN+ ++NILI + NR+D E++ + G+ D +Y LI G CE K A +
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 242 YFVEMIEKGLLPQKVTFETLYRGL 265
F EM+ + + P VT++ L GL
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGL 483
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 137/283 (48%), Gaps = 11/283 (3%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y LI G+C R D + L +MI+R + PNVVT++VL++ + E +R
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK----------EGKLR 350
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
AE++ EM RGI PD +++ ++ + + + + ++ M KG P + T++ ++
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
C RI+D EL +M GV TYN + + N A +L+++M +
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV- 469
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
PN+ +Y IL+ + EI+ ++ S + D+ Y ++IHG+C K +A
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 529
Query: 242 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 284
F + KG+ P T+ + GL + L L +K++E+
Sbjct: 530 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Score = 117 bits (294), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 151/301 (50%), Gaps = 20/301 (6%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+++LI G C R+ A + M+E G +P+++T N L+NG+C L E
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLC----LSGKEA------ 210
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A + D+M G +P+ ++ VL+V ++ Q L+++ L M+E+ I YS ++
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEY--RGRKDANGAMKLYRQMKEDG 179
LC G +++A L EM G+ + TYN + GR D +GA KL R M +
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD-DGA-KLLRDMIKRK 328
Query: 180 LCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEA 239
+ PN+ ++++LI F+ ++ E+ ++ G+ PD +YT LI G C++ +A
Sbjct: 329 I-NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 240 CQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLK-KKLDEESITFGSEFQN 294
Q M+ KG P TF L G ++ D L +R++ + + +++T+ + Q
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 295 Y 295
+
Sbjct: 448 F 448
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 98/181 (54%), Gaps = 10/181 (5%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y +LI G+C++ ++++A+ EM+ R V PN+VTY +LL+G+C SE+
Sbjct: 441 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE---SEK------ 491
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A ++F+++ +E D+ ++I++H A + + D + KG+ P V TY+ ++
Sbjct: 492 -ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
LC G + +AE L +M +G P TYN + + G DA ++KL ++K G
Sbjct: 551 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFS 610
Query: 182 V 182
V
Sbjct: 611 V 611
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 135/300 (45%), Gaps = 18/300 (6%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-RASLHPSERFEKTI 60
++ L K + D+ +M +G+ N+ T ++++N CR R K I
Sbjct: 91 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
+ G EP+ +FS +++ + +L+ ++ M E G P + T +++
Sbjct: 151 K-----------LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL 199
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
V LC G+ +A L+ +MV G P+A TY AM+L R+M+E +
Sbjct: 200 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
+ + Y+I+I +D ++N+++ G+ ++ +Y +LI G C +W +
Sbjct: 260 KLDAV-KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318
Query: 241 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKK-----LDEESITFGSEFQNY 295
+ +MI++ + P VTF L ++ LR L K+ + ++IT+ S +
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+Y +I+G C +++D A + +GV+P V TYN+++ G+C++ L
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLS--------- 560
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
AE +F +M G PD +++I++ + S+ + +K G +T V
Sbjct: 561 -EAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619
Query: 121 VKCLCSCGRIEDA 133
+ L S GR++ +
Sbjct: 620 IDML-SDGRLKKS 631
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 137/264 (51%), Gaps = 13/264 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
YT L++G+C+ +++ A EM++RGV+ ++V Y VL++G SL +R +
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG-----SLKHKDR-----K 664
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
+ EM RG++PD ++ ++ S+ + + + M +G P TY++V+
Sbjct: 665 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEY-RGRKDANGAMKLYRQMKEDGL 180
LC G + +AE L +M P+ TY CF +G D A++L+ + + GL
Sbjct: 725 NGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GL 783
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
+ N +YN+LI F R++ E+ + G G+ PD +YT +I+ LC + K+A
Sbjct: 784 -LANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAI 842
Query: 241 QYFVEMIEKGLLPQKVTFETLYRG 264
+ + M EKG+ P +V + TL G
Sbjct: 843 ELWNSMTEKGIRPDRVAYNTLIHG 866
Score = 121 bits (304), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 137/264 (51%), Gaps = 13/264 (4%)
Query: 3 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRN 62
+SL+ G K +I+ A + +++ GV PN+ YN L++ +C+ H
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFH----------E 385
Query: 63 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVK 122
AE +FD M G+ P+ ++SI++ ++ R + +L L M + G+ +V Y+S++
Sbjct: 386 AELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLIN 445
Query: 123 CLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCV 182
C G I AE + EM+ + P+ TY Y + N A++LY +M G+
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI-A 504
Query: 183 PNMHSYNILI-GMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
P+++++ L+ G+F A D V+ ++N++ + P+ +Y ++I G CE+ +A +
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVK-LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 563
Query: 242 YFVEMIEKGLLPQKVTFETLYRGL 265
+ EM EKG++P ++ L GL
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGL 587
Score = 104 bits (260), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 147/319 (46%), Gaps = 48/319 (15%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+YT +I C++ + A+ + M G + N+V YNVL++G+C++ + +
Sbjct: 229 IYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKK----------QKV 278
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
A + ++ + ++PDV ++ +++ + + ++ L+ ++ M P+ A SS+
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEY-RGRKDANGAMKLYRQMKEDG 179
V+ L G+IE+A L+ +V GV P+ YN +GRK + L+ +M + G
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAEL-LFDRMGKIG 397
Query: 180 LCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLG---------------------- 217
L PN +Y+ILI MF ++D ++ +GL
Sbjct: 398 L-RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 218 -------------PDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 264
P + +YT L+ G C K K +A + + EM KG+ P TF TL G
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516
Query: 265 LIQSDMLRTWRRLKKKLDE 283
L ++ ++R +L ++ E
Sbjct: 517 LFRAGLIRDAVKLFNEMAE 535
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 116/260 (44%), Gaps = 11/260 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y SLI G CK I AE F+ EMI + +EP VVTY L+ G C + I
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK----------IN 489
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A +++ EM +GI P + +F+ +L RA + ++ N M E + P TY+ ++
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLC 181
+ C G + A E L EM G+ P +Y A+ A K++ G C
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNC 608
Query: 182 VPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQ 241
N Y L+ F +++ + ++ G+ DL Y +LI G + + K
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFG 668
Query: 242 YFVEMIEKGLLPQKVTFETL 261
EM ++GL P V + ++
Sbjct: 669 LLKEMHDRGLKPDDVIYTSM 688
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 141/302 (46%), Gaps = 23/302 (7%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y +L+YG CK+ ++ + EM+ P+ + L+ G+ +R + E+ +
Sbjct: 300 YCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRG------KIEEALN 353
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA---HQPQLSLDKLNFMKEKGICPTVATYS 118
++V D G+ P++ ++ ++ + H+ +L D+ M + G+ P TYS
Sbjct: 354 LVKRVVD----FGVSPNLFVYNALIDSLCKGRKFHEAELLFDR---MGKIGLRPNDVTYS 406
Query: 119 SVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 178
++ C G+++ A LGEMV G+ S YN + D + A +M
Sbjct: 407 ILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINK 466
Query: 179 GLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKE 238
L P + +Y L+G + + +++ +++++ G G+ P + ++T L+ GL ++
Sbjct: 467 KL-EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD 525
Query: 239 ACQYFVEMIEKGLLPQKVTFETLYRGLI-QSDMLRTWRRLKKKLDEESITFGSEFQNYHF 297
A + F EM E + P +VT+ + G + DM + + LK+ ++ G Y +
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK-----GIVPDTYSY 580
Query: 298 KP 299
+P
Sbjct: 581 RP 582
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 11/219 (5%)
Query: 1 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTI 60
+YTS+I K A MI G PN VTY ++NG+C+ +
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG----------FV 733
Query: 61 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSV 120
AE + +M+ P+ ++ L + ++ +L+ KG+ ATY+ +
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNML 793
Query: 121 VKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
++ C GRIE+A EL+ M+ +GV P TY E R D A++L+ M E G+
Sbjct: 794 IRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGI 853
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPD 219
P+ +YN LI M E+ N++ GL P+
Sbjct: 854 -RPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 15 IDMAERF-LGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMRVR 73
+DM + L I +G+ N TYN+L+ G CR+ I A ++ M
Sbjct: 767 VDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGR----------IEEASELITRMIGD 816
Query: 74 GIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDA 133
G+ PD +++ +++ R + + +++ N M EKGI P Y++++ C G + A
Sbjct: 817 GVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKA 876
Query: 134 EELLGEMVRNGVCPSAET 151
EL EM+R G+ P+ +T
Sbjct: 877 TELRNEMLRQGLIPNNKT 894
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 19/211 (9%)
Query: 73 RGIEPDVTSFSIVLHVYSRAH-----------------QPQLSLDKLNFMKEKGICPTVA 115
RG + SF I++H +A+ +P + L EK + +
Sbjct: 98 RGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSS 157
Query: 116 TYSSVVKCLCSCGRIEDAEELLGEMV-RNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQ 174
++ +++ R+ D + M+ + + P T + + AM+L+
Sbjct: 158 SFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFND 217
Query: 175 MKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQ 234
M G+ P+++ Y +I L + +E+ ++ +G ++ Y +LI GLC+KQ
Sbjct: 218 MVSVGI-RPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQ 276
Query: 235 KWKEACQYFVEMIEKGLLPQKVTFETLYRGL 265
K EA ++ K L P VT+ TL GL
Sbjct: 277 KVWEAVGIKKDLAGKDLKPDVVTYCTLVYGL 307
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 82/209 (39%), Gaps = 24/209 (11%)
Query: 94 QPQLSLDKLNFMK-EKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETY 152
P+L L NF+ +G + A++ ++ L A LL ++ + PS + +
Sbjct: 83 DPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPS-DVF 141
Query: 153 NCFFKEY-------------------RGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIG 193
N F Y R R+ +G + +++ M +P + + + L+
Sbjct: 142 NVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVL-VFKMMITKVSLLPEVRTLSALLH 200
Query: 194 MFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 253
+ + E++ND+ G+ PD+ YT +I LCE + A + M G
Sbjct: 201 GLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDV 260
Query: 254 QKVTFETLYRGLIQSDMLRTWRRLKKKLD 282
V + L GL + + W + K D
Sbjct: 261 NIVPYNVLIDGLCKKQ--KVWEAVGIKKD 287
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 138/296 (46%), Gaps = 27/296 (9%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSER-FEKTI 60
+TSLI G CK I A L EM+ G +PNV T+ L++G+C+R + R F K +
Sbjct: 290 FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLV 349
Query: 61 RN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQP 95
R+ AE +F M+ +G+ P+V +++ +++ + +A
Sbjct: 350 RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSF 409
Query: 96 QLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCF 155
+ + +N M ++G P + TY++ + LC R +A ELL + G+ TY
Sbjct: 410 GRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTIL 469
Query: 156 FKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSG 215
+E + D N A+ + +M + G +M NILI F +M ++ V G
Sbjct: 470 IQEQCKQNDINQALAFFCRMNKTGF-EADMRLNNILIAAFCRQKKMKESERLFQLVVSLG 528
Query: 216 LGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 271
L P ++YT +I C++ A +YF M G +P T+ +L GL + M+
Sbjct: 529 LIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMV 584
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 118/251 (47%), Gaps = 10/251 (3%)
Query: 15 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAEKVFDEMRVRG 74
I+ AE EM RGV P+ +Y +++ G R + I+ A++ M RG
Sbjct: 198 IEYAENVFDEMSVRGVVPDSSSYKLMVIGCFR----------DGKIQEADRWLTGMIQRG 247
Query: 75 IEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAE 134
PD + +++L ++ M + G P + ++S++ LC G I+ A
Sbjct: 248 FIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAF 307
Query: 135 ELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGM 194
E+L EMVRNG P+ T+ R A +L+ ++ PN+H+Y +IG
Sbjct: 308 EMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGG 367
Query: 195 FMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 254
+ ++++ +++ +K GL P++++YT LI+G C+ + A + M ++G +P
Sbjct: 368 YCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPN 427
Query: 255 KVTFETLYRGL 265
T+ L
Sbjct: 428 IYTYNAAIDSL 438
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 12/261 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
Y ++ G + +I A+R+L MI+RG P+ T ++L +C +
Sbjct: 220 YKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENG----------LVN 269
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
A F +M G +P++ +F+ ++ + + + + L M G P V T+++++
Sbjct: 270 RAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALI 329
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVC-PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGL 180
LC G E A L ++VR+ P+ TY Y N A L+ +MKE GL
Sbjct: 330 DGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 389
Query: 181 CVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEAC 240
PN+++Y LI E+ N + G P++ +Y I LC+K + EA
Sbjct: 390 -FPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY 448
Query: 241 QYFVEMIEKGLLPQKVTFETL 261
+ + GL VT+ L
Sbjct: 449 ELLNKAFSCGLEADGVTYTIL 469
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 116/301 (38%), Gaps = 47/301 (15%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERF----- 56
YT+LI G CK A + M + G PN+ TYN ++ +C+++ +
Sbjct: 396 YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF 455
Query: 57 --------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQ 96
+ I A F M G E D+ +I++ + R + +
Sbjct: 456 SCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 515
Query: 97 LSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFF 156
S + G+ PT TY+S++ C C G I+ A + M R+G P + TY
Sbjct: 516 ESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLI 575
Query: 157 KEYRGRKDANGAMKLYRQMKEDGLCVPNM------HSY---NILIGMFMALNRMDMVREI 207
+ + A KLY M + GL P + + Y N + L +D +++
Sbjct: 576 SGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLD--KKL 633
Query: 208 WNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 267
W + + L+ LC ++K A +F +++EK +VT +
Sbjct: 634 W-----------IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSE 682
Query: 268 S 268
S
Sbjct: 683 S 683
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 7/180 (3%)
Query: 105 MKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKD 164
M+ +G+ P+ T + V++ G IE AE + EM GV P + +Y
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232
Query: 165 ANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMV-REIWNDVKGSGLG--PDLD 221
A + M + G +P+ + +++ AL +V R IW K LG P+L
Sbjct: 233 IQEADRWLTGMIQRGF-IPDNATCTLIL---TALCENGLVNRAIWYFRKMIDLGFKPNLI 288
Query: 222 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 281
++T LI GLC+K K+A + EM+ G P T L GL + RL KL
Sbjct: 289 NFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKL 348
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 87/202 (43%), Gaps = 22/202 (10%)
Query: 87 HVYSRAHQPQLSLDKLNFMKEKGI--CPTVATYSSVVKCLC----SCG----------RI 130
HV S H+ L D + E+ I ++A+ S + LC + G +
Sbjct: 72 HVVSSPHRVNLDFDANSLTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYL 131
Query: 131 EDAEELLGEMVRNGVCPSA-ETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYN 189
A+ LL NG A E C + + N A+ + M+ GL P+ + N
Sbjct: 132 VTADSLLA----NGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGL-TPSSITMN 186
Query: 190 ILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 249
++ + + L ++ +++++ G+ PD SY +++ G K +EA ++ MI++
Sbjct: 187 CVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQR 246
Query: 250 GLLPQKVTFETLYRGLIQSDML 271
G +P T + L ++ ++
Sbjct: 247 GFIPDNATCTLILTALCENGLV 268
>sp|Q9LIL5|PP233_ARATH Putative pentatricopeptide repeat-containing protein At3g15200
OS=Arabidopsis thaliana GN=At3g15200 PE=3 SV=1
Length = 523
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 132/255 (51%), Gaps = 16/255 (6%)
Query: 5 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRNAE 64
++ GWC + + A+RF ++I P+VV+Y ++N + ++ L + + + +
Sbjct: 253 ILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTR 312
Query: 65 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCL 124
+ PDV + V+ + +L+ + EKG P V TY+S++K L
Sbjct: 313 R----------NPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHL 362
Query: 125 CSCGRIEDAEELLGEM-VRNGVC-PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCV 182
C R E EL+ EM ++ G C P+ T++ K + KD + ++ + K C
Sbjct: 363 CKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNK----CE 418
Query: 183 PNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEACQY 242
YN++ +++ ++ + VREIW++++ SGLGPD +YT+ IHGL K K EA Y
Sbjct: 419 MTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSY 478
Query: 243 FVEMIEKGLLPQKVT 257
F EM+ KG++P+ T
Sbjct: 479 FQEMMSKGMVPEPRT 493
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 113/266 (42%), Gaps = 23/266 (8%)
Query: 15 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSE---------------RFEKT 59
ID+ E + E++ R Y +L+ + + S+H S RFE+
Sbjct: 105 IDLTEELVLEVVNRNRSDWKPAY--ILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEE- 161
Query: 60 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSS 119
+VFDEM R + ++ ++L+ Y+ AH+ ++ KE GI + +
Sbjct: 162 ---FHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHG 218
Query: 120 VVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDG 179
++ LC +E AE L R C + N + + + A + ++ +
Sbjct: 219 LLMWLCRYKHVEFAETLFCSRRREFGC-DIKAMNMILNGWCVLGNVHEAKRFWKDIIASK 277
Query: 180 LCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEA 239
C P++ SY +I ++ E++ + + PD+ +I LC K++ EA
Sbjct: 278 -CRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEA 336
Query: 240 CQYFVEMIEKGLLPQKVTFETLYRGL 265
+ F E+ EKG P VT+ +L + L
Sbjct: 337 LEVFREISEKGPDPNVVTYNSLLKHL 362
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 24/187 (12%)
Query: 3 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIRN 62
++I C RI A E+ E+G +PNVVTYN LL +C+ IR
Sbjct: 321 NNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCK-------------IRR 367
Query: 63 AEKVF---DEMRVRG--IEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICP-TVAT 116
EKV+ +EM ++G P+ +FS +L R+ + L+++ K C T
Sbjct: 368 TEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERM----AKNKCEMTSDL 423
Query: 117 YSSVVKCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMK 176
Y+ + + + E E+ EM R+G+ P TY + A+ +++M
Sbjct: 424 YNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMM 483
Query: 177 EDGLCVP 183
G+ VP
Sbjct: 484 SKGM-VP 489
>sp|Q9LUJ4|PP248_ARATH Pentatricopeptide repeat-containing protein At3g22670,
mitochondrial OS=Arabidopsis thaliana GN=At3g22670 PE=2
SV=1
Length = 562
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 131/271 (48%), Gaps = 12/271 (4%)
Query: 2 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPSERFEKTIR 61
+ LI+G+CK + D A + M P+VVTY + C+ E R
Sbjct: 276 FNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCK----------EGDFR 325
Query: 62 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVV 121
++ +EMR G P+V +++IV+H ++ Q +L MKE G P YSS++
Sbjct: 326 RVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLI 385
Query: 122 KCLCSCGRIEDAEELLGEMVRNGVCPSAETYNCFFKEYRGRKDANGAMKLYRQMK-EDG- 179
L GR +DA E+ +M GV YN A++L ++M+ E+G
Sbjct: 386 HILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGE 445
Query: 180 LCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLDSYTMLIHGLCEKQKWKEA 239
C PN+ +Y L+ M +M ++ + + + + + D+ +Y +LI GLC K +EA
Sbjct: 446 SCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEA 505
Query: 240 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 270
C +F E + KG++P+ T + L L + +M
Sbjct: 506 CLFFEEAVRKGMVPRDSTCKMLVDELEKKNM 536
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 14/202 (6%)
Query: 29 GVEPNVVTYNVLLNGVCRRASL-HPSERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH 87
GV+ + + N L++ + + S+ H E F K +FD I+PD +F+I++H
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFLK-------LFD-----TIKPDARTFNILIH 281
Query: 88 VYSRAHQPQLSLDKLNFMKEKGICPTVATYSSVVKCLCSCGRIEDAEELLGEMVRNGVCP 147
+ +A + + ++ MK P V TY+S V+ C G E+L EM NG P
Sbjct: 282 GFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNP 341
Query: 148 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREI 207
+ TY K A+ +Y +MKEDG CVP+ Y+ LI + R EI
Sbjct: 342 NVVTYTIVMHSLGKSKQVAEALGVYEKMKEDG-CVPDAKFYSSLIHILSKTGRFKDAAEI 400
Query: 208 WNDVKGSGLGPDLDSYTMLIHG 229
+ D+ G+ D+ Y +I
Sbjct: 401 FEDMTNQGVRRDVLVYNTMISA 422
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 79/191 (41%), Gaps = 11/191 (5%)
Query: 107 EKGICPTVATYSSVVKCLCSCGRIEDAEELLGEM-----VRNGVCPSAETYNCFFKEYRG 161
E+ T+ T S V++ L G+ A + EM V+ + KE
Sbjct: 196 EESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSI 255
Query: 162 RKDANGAMKLYRQMKEDGLCVPNMHSYNILIGMFMALNRMDMVREIWNDVKGSGLGPDLD 221
+KL+ +K P+ ++NILI F + D R + + +K + PD+
Sbjct: 256 EHAHEVFLKLFDTIK------PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVV 309
Query: 222 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 281
+YT + C++ ++ + EM E G P VT+ + L +S + + +K+
Sbjct: 310 TYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKM 369
Query: 282 DEESITFGSEF 292
E+ ++F
Sbjct: 370 KEDGCVPDAKF 380
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,090,353
Number of Sequences: 539616
Number of extensions: 4538903
Number of successful extensions: 17982
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 302
Number of HSP's successfully gapped in prelim test: 179
Number of HSP's that attempted gapping in prelim test: 10848
Number of HSP's gapped (non-prelim): 2641
length of query: 302
length of database: 191,569,459
effective HSP length: 117
effective length of query: 185
effective length of database: 128,434,387
effective search space: 23760361595
effective search space used: 23760361595
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)