Query 022133
Match_columns 302
No_of_seqs 258 out of 2269
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 08:16:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022133.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022133hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01299 synapt_SV2 synaptic 100.0 4.4E-28 9.5E-33 225.3 23.0 208 46-255 162-381 (742)
2 KOG0569 Permease of the major 100.0 1E-25 2.3E-30 198.0 26.5 240 51-290 11-270 (485)
3 TIGR00887 2A0109 phosphate:H+ 99.9 9.2E-26 2E-30 205.3 22.6 207 46-253 11-250 (502)
4 KOG0254 Predicted transporter 99.9 3.1E-24 6.6E-29 195.5 26.3 248 48-296 42-302 (513)
5 PRK10077 xylE D-xylose transpo 99.9 1.3E-23 2.9E-28 190.2 23.3 204 48-254 9-240 (479)
6 TIGR00879 SP MFS transporter, 99.9 3.8E-23 8.2E-28 186.4 25.8 204 48-252 25-240 (481)
7 TIGR00898 2A0119 cation transp 99.9 8.2E-24 1.8E-28 192.8 18.8 219 72-294 110-332 (505)
8 PRK10642 proline/glycine betai 99.9 8.8E-23 1.9E-27 185.2 23.9 184 51-235 16-219 (490)
9 TIGR02332 HpaX 4-hydroxyphenyl 99.9 6.1E-23 1.3E-27 182.2 20.3 182 49-233 6-194 (412)
10 COG2271 UhpC Sugar phosphate p 99.9 5.2E-24 1.1E-28 180.2 10.5 236 47-297 25-264 (448)
11 COG2814 AraJ Arabinose efflux 99.9 2.9E-22 6.2E-27 171.5 20.4 179 48-229 10-189 (394)
12 TIGR00891 2A0112 putative sial 99.9 3.2E-22 6.9E-27 177.0 21.2 186 48-235 9-195 (405)
13 PF00083 Sugar_tr: Sugar (and 99.9 4.6E-27 9.9E-32 211.2 -10.6 231 57-287 6-250 (451)
14 TIGR00895 2A0115 benzoate tran 99.9 3.2E-22 7E-27 176.3 19.4 187 48-237 14-201 (398)
15 PRK12307 putative sialic acid 99.9 6E-22 1.3E-26 176.7 21.0 182 48-232 15-196 (426)
16 KOG0255 Synaptic vesicle trans 99.9 6.1E-22 1.3E-26 181.1 20.2 206 87-296 117-329 (521)
17 PRK10406 alpha-ketoglutarate t 99.9 4E-21 8.6E-26 171.8 22.0 181 51-232 22-222 (432)
18 PRK11551 putative 3-hydroxyphe 99.9 2.6E-21 5.7E-26 171.6 20.0 187 46-235 10-197 (406)
19 PRK03545 putative arabinose tr 99.9 1.8E-21 4E-26 171.7 18.5 180 50-232 8-188 (390)
20 TIGR00903 2A0129 major facilit 99.9 1.1E-21 2.3E-26 171.3 15.5 166 65-234 5-171 (368)
21 PRK14995 methyl viologen resis 99.9 2.4E-21 5.1E-26 176.0 18.1 181 49-232 4-186 (495)
22 KOG0253 Synaptic vesicle trans 99.9 4.9E-21 1.1E-25 159.0 17.8 204 46-254 73-276 (528)
23 PRK10213 nepI ribonucleoside t 99.9 5.1E-21 1.1E-25 168.9 19.1 183 47-232 16-199 (394)
24 PRK15403 multidrug efflux syst 99.9 4.5E-21 9.8E-26 170.3 18.9 176 55-233 20-196 (413)
25 KOG1330 Sugar transporter/spin 99.9 5.1E-23 1.1E-27 175.9 4.6 187 44-232 26-213 (493)
26 PRK11663 regulatory protein Uh 99.9 4.4E-21 9.5E-26 171.6 16.5 179 52-233 24-203 (434)
27 TIGR00894 2A0114euk Na(+)-depe 99.9 7.7E-21 1.7E-25 171.5 17.1 182 48-232 16-223 (465)
28 TIGR00893 2A0114 d-galactonate 99.9 4.6E-21 9.9E-26 168.6 14.4 168 62-232 5-173 (399)
29 PRK03893 putative sialic acid 99.9 2.5E-20 5.4E-25 169.6 19.5 184 48-234 17-200 (496)
30 TIGR00710 efflux_Bcr_CflA drug 99.9 2.7E-20 5.8E-25 163.7 17.6 177 53-232 7-184 (385)
31 PLN00028 nitrate transmembrane 99.9 1.3E-19 2.9E-24 163.6 21.6 177 50-230 35-220 (476)
32 PRK10091 MFS transport protein 99.9 3.8E-20 8.3E-25 162.8 17.6 177 53-232 5-182 (382)
33 PRK09952 shikimate transporter 99.9 9.2E-20 2E-24 163.2 20.1 183 50-236 21-227 (438)
34 KOG0252 Inorganic phosphate tr 99.8 8.6E-21 1.9E-25 161.9 12.1 191 45-235 35-252 (538)
35 TIGR00881 2A0104 phosphoglycer 99.8 5.2E-21 1.1E-25 167.5 11.0 170 60-232 4-175 (379)
36 PF07690 MFS_1: Major Facilita 99.8 2.6E-20 5.7E-25 161.6 15.0 171 58-231 3-175 (352)
37 TIGR00711 efflux_EmrB drug res 99.8 2.6E-20 5.7E-25 168.9 15.4 176 53-231 4-180 (485)
38 PRK15402 multidrug efflux syst 99.8 8.4E-20 1.8E-24 162.0 17.8 182 48-232 10-192 (406)
39 PRK09556 uhpT sugar phosphate 99.8 1.2E-20 2.5E-25 170.4 12.2 183 49-233 27-217 (467)
40 PRK11652 emrD multidrug resist 99.8 1.3E-19 2.8E-24 160.1 18.6 181 49-232 6-187 (394)
41 PRK10642 proline/glycine betai 99.8 8.1E-20 1.8E-24 165.8 17.0 185 65-252 264-458 (490)
42 PRK15075 citrate-proton sympor 99.8 4.5E-19 9.7E-24 158.7 21.3 180 52-233 16-216 (434)
43 PRK09705 cynX putative cyanate 99.8 2.6E-19 5.7E-24 158.1 19.6 153 68-223 26-178 (393)
44 TIGR00900 2A0121 H+ Antiporter 99.8 1.9E-19 4.2E-24 156.8 18.1 168 57-227 5-177 (365)
45 TIGR00890 2A0111 Oxalate/Forma 99.8 1E-19 2.2E-24 159.1 14.9 161 67-231 19-180 (377)
46 PRK11273 glpT sn-glycerol-3-ph 99.8 5.2E-19 1.1E-23 159.0 19.4 174 56-233 34-213 (452)
47 PF06609 TRI12: Fungal trichot 99.8 5.3E-19 1.1E-23 159.6 19.1 159 64-227 57-215 (599)
48 TIGR00886 2A0108 nitrite extru 99.8 4.2E-19 9.1E-24 155.2 17.6 174 55-232 5-192 (366)
49 TIGR00806 rfc RFC reduced fola 99.8 3.6E-19 7.8E-24 155.2 16.4 165 67-235 42-209 (511)
50 PRK10473 multidrug efflux syst 99.8 7.1E-19 1.5E-23 155.3 18.7 173 56-231 8-181 (392)
51 PRK10504 putative transporter; 99.8 4.1E-19 9E-24 160.6 17.3 177 52-231 11-188 (471)
52 PRK11043 putative transporter; 99.8 8.3E-19 1.8E-23 155.3 18.3 169 60-231 15-183 (401)
53 PRK03699 putative transporter; 99.8 1E-18 2.2E-23 154.5 18.3 174 50-226 6-180 (394)
54 KOG2532 Permease of the major 99.8 3.5E-19 7.7E-24 158.3 13.7 197 80-294 67-267 (466)
55 PRK12382 putative transporter; 99.8 1.8E-18 3.8E-23 152.8 18.2 175 54-231 18-201 (392)
56 KOG2533 Permease of the major 99.8 6.7E-19 1.4E-23 157.0 15.5 178 53-233 47-232 (495)
57 PRK11102 bicyclomycin/multidru 99.8 7.7E-19 1.7E-23 154.2 15.3 162 67-231 7-169 (377)
58 PRK03633 putative MFS family t 99.8 8.7E-18 1.9E-22 147.9 21.8 151 52-204 7-157 (381)
59 PRK10133 L-fucose transporter; 99.8 2.4E-18 5.1E-23 153.9 18.3 151 48-200 23-176 (438)
60 TIGR00885 fucP L-fucose:H+ sym 99.8 2.6E-18 5.6E-23 152.3 18.0 171 53-225 5-203 (410)
61 KOG2615 Permease of the major 99.8 2.1E-19 4.6E-24 150.1 10.1 146 86-232 66-217 (451)
62 TIGR00892 2A0113 monocarboxyla 99.8 2E-18 4.2E-23 155.3 17.2 175 50-228 18-193 (455)
63 TIGR00805 oat sodium-independe 99.8 1.6E-19 3.4E-24 167.5 10.2 173 57-231 39-283 (633)
64 TIGR00712 glpT glycerol-3-phos 99.8 1.8E-18 3.8E-23 155.0 16.4 177 53-233 29-211 (438)
65 PRK05122 major facilitator sup 99.8 1.3E-18 2.8E-23 154.0 15.3 175 53-230 17-200 (399)
66 PRK11195 lysophospholipid tran 99.8 4.5E-18 9.6E-23 150.2 18.1 170 56-232 8-177 (393)
67 PRK15034 nitrate/nitrite trans 99.8 4E-18 8.7E-23 150.8 17.7 179 50-231 33-235 (462)
68 PRK09874 drug efflux system pr 99.8 1.2E-17 2.6E-22 148.2 19.7 176 54-231 17-196 (408)
69 PRK10054 putative transporter; 99.8 6.3E-18 1.4E-22 149.4 16.7 173 55-231 11-185 (395)
70 TIGR01299 synapt_SV2 synaptic 99.8 9.3E-18 2E-22 156.7 18.5 138 92-231 599-736 (742)
71 KOG0569 Permease of the major 99.8 1.5E-17 3.3E-22 146.7 17.6 233 1-243 214-463 (485)
72 cd06174 MFS The Major Facilita 99.8 6.4E-18 1.4E-22 146.2 14.7 171 56-229 4-174 (352)
73 TIGR00899 2A0120 sugar efflux 99.8 2.8E-17 6.1E-22 144.0 18.5 172 58-232 4-180 (375)
74 PRK10207 dipeptide/tripeptide 99.8 1.5E-17 3.2E-22 150.3 16.9 177 50-229 13-194 (489)
75 PRK11646 multidrug resistance 99.8 2E-17 4.3E-22 146.4 17.4 170 58-231 17-188 (400)
76 TIGR00883 2A0106 metabolite-pr 99.8 4.3E-17 9.3E-22 143.4 19.3 170 62-232 4-194 (394)
77 TIGR00924 yjdL_sub1_fam amino 99.8 1.9E-17 4.2E-22 149.4 16.9 172 53-227 12-190 (475)
78 TIGR00897 2A0118 polyol permea 99.8 6.5E-17 1.4E-21 143.3 19.0 157 55-214 17-178 (402)
79 PTZ00207 hypothetical protein; 99.8 5.8E-17 1.3E-21 147.3 18.2 155 68-229 44-206 (591)
80 PRK10489 enterobactin exporter 99.8 4E-18 8.6E-23 151.8 10.2 170 60-232 26-200 (417)
81 TIGR00896 CynX cyanate transpo 99.7 9.3E-17 2E-21 139.9 15.8 148 68-219 17-165 (355)
82 KOG3764 Vesicular amine transp 99.7 1.5E-17 3.3E-22 139.8 10.1 150 78-228 96-246 (464)
83 PRK11010 ampG muropeptide tran 99.7 8.9E-16 1.9E-20 139.2 18.3 175 53-232 14-198 (491)
84 PRK08633 2-acyl-glycerophospho 99.7 3.5E-16 7.5E-21 155.9 16.9 161 72-232 31-203 (1146)
85 COG2223 NarK Nitrate/nitrite t 99.7 2.6E-16 5.7E-21 133.9 13.4 181 50-234 13-199 (417)
86 TIGR00887 2A0109 phosphate:H+ 99.7 7E-16 1.5E-20 140.6 16.3 167 65-231 302-491 (502)
87 PRK11902 ampG muropeptide tran 99.7 1.2E-15 2.6E-20 135.3 17.4 170 58-232 6-185 (402)
88 PRK06814 acylglycerophosphoeth 99.7 7.1E-16 1.5E-20 153.5 16.6 141 90-231 54-197 (1140)
89 PRK09584 tppB putative tripept 99.7 1.4E-15 3E-20 138.2 16.9 167 53-222 23-194 (500)
90 PRK11128 putative 3-phenylprop 99.7 2.8E-15 6.1E-20 132.0 17.8 164 60-230 13-180 (382)
91 PRK11551 putative 3-hydroxyphe 99.7 2.7E-15 5.8E-20 133.1 17.5 159 69-229 238-396 (406)
92 TIGR00902 2A0127 phenyl propri 99.7 3.1E-15 6.8E-20 131.7 17.4 159 56-219 9-169 (382)
93 PRK15462 dipeptide/tripeptide 99.7 2.7E-15 5.9E-20 134.2 16.8 170 53-225 11-185 (493)
94 PRK15011 sugar efflux transpor 99.7 4.8E-15 1E-19 131.0 18.3 156 71-230 236-392 (393)
95 TIGR00880 2_A_01_02 Multidrug 99.7 6.4E-16 1.4E-20 115.7 10.9 135 95-230 5-140 (141)
96 TIGR00882 2A0105 oligosacchari 99.7 7.4E-15 1.6E-19 129.9 18.9 172 54-231 5-186 (396)
97 TIGR00901 2A0125 AmpG-related 99.7 2.6E-15 5.7E-20 130.8 14.8 160 68-231 5-181 (356)
98 COG0738 FucP Fucose permease [ 99.6 2.4E-14 5.2E-19 121.3 18.1 149 52-202 14-165 (422)
99 PRK10077 xylE D-xylose transpo 99.6 1.2E-14 2.5E-19 131.8 17.3 160 69-231 289-460 (479)
100 TIGR00890 2A0111 Oxalate/Forma 99.6 3.7E-15 8.1E-20 130.3 13.4 148 72-222 226-375 (377)
101 PRK05122 major facilitator sup 99.6 1.6E-14 3.5E-19 127.8 17.4 157 70-231 235-391 (399)
102 PRK15011 sugar efflux transpor 99.6 1.5E-14 3.2E-19 127.9 17.0 175 54-232 18-198 (393)
103 cd06174 MFS The Major Facilita 99.6 2.1E-14 4.6E-19 124.2 16.6 161 65-228 189-351 (352)
104 TIGR00892 2A0113 monocarboxyla 99.6 1.9E-14 4.2E-19 129.4 16.4 163 59-223 249-415 (455)
105 TIGR00889 2A0110 nucleoside tr 99.6 1.1E-14 2.3E-19 129.7 14.3 160 72-231 229-405 (418)
106 PRK09952 shikimate transporter 99.6 2.9E-14 6.3E-19 127.7 16.9 160 70-231 269-435 (438)
107 PRK09556 uhpT sugar phosphate 99.6 1.9E-14 4.1E-19 130.0 15.7 172 53-227 260-447 (467)
108 PRK09528 lacY galactoside perm 99.6 1.2E-14 2.6E-19 129.6 13.2 140 90-230 264-405 (420)
109 TIGR00898 2A0119 cation transp 99.6 2.6E-14 5.6E-19 130.5 15.3 137 92-231 359-497 (505)
110 TIGR00879 SP MFS transporter, 99.6 2.4E-14 5.2E-19 129.1 14.4 172 57-231 290-473 (481)
111 PRK12382 putative transporter; 99.6 4.5E-14 9.9E-19 124.7 15.8 152 70-226 235-386 (392)
112 PRK09528 lacY galactoside perm 99.6 6E-14 1.3E-18 125.1 16.1 166 58-229 17-191 (420)
113 TIGR00883 2A0106 metabolite-pr 99.6 3.3E-14 7.2E-19 125.0 13.9 162 56-219 224-391 (394)
114 TIGR00899 2A0120 sugar efflux 99.6 1.5E-13 3.2E-18 120.5 16.7 154 73-230 221-375 (375)
115 PRK09705 cynX putative cyanate 99.6 2.6E-13 5.6E-18 120.0 17.4 163 66-232 220-385 (393)
116 TIGR00893 2A0114 d-galactonate 99.5 1.7E-13 3.7E-18 120.4 15.6 169 54-225 218-395 (399)
117 PRK03699 putative transporter; 99.5 2.2E-13 4.7E-18 120.5 16.2 170 58-231 212-382 (394)
118 PF00083 Sugar_tr: Sugar (and 99.5 3.2E-17 7E-22 147.4 -8.7 231 1-243 200-445 (451)
119 TIGR00902 2A0127 phenyl propri 99.5 5E-13 1.1E-17 117.7 17.2 162 60-226 214-376 (382)
120 PRK09874 drug efflux system pr 99.5 2.8E-13 6.1E-18 120.2 15.2 157 70-227 238-396 (408)
121 PRK10489 enterobactin exporter 99.5 2.4E-13 5.1E-18 121.2 14.4 159 70-231 242-402 (417)
122 TIGR00895 2A0115 benzoate tran 99.5 1.8E-13 4E-18 120.5 12.5 137 62-200 261-397 (398)
123 TIGR00897 2A0118 polyol permea 99.5 1.1E-12 2.4E-17 116.3 17.5 164 60-228 231-400 (402)
124 KOG2504 Monocarboxylate transp 99.5 1.2E-13 2.6E-18 124.5 11.4 158 67-228 62-220 (509)
125 TIGR01301 GPH_sucrose GPH fami 99.5 6.6E-13 1.4E-17 118.5 15.3 177 54-232 7-222 (477)
126 PRK03893 putative sialic acid 99.5 3.3E-13 7.2E-18 122.9 13.2 143 70-215 294-439 (496)
127 PRK03633 putative MFS family t 99.5 1E-12 2.2E-17 115.7 15.9 153 70-228 219-371 (381)
128 PF11700 ATG22: Vacuole efflux 99.5 1.6E-12 3.5E-17 116.6 17.2 178 52-231 282-470 (477)
129 PRK03545 putative arabinose tr 99.5 2.7E-12 5.7E-17 113.4 18.4 147 76-227 231-378 (390)
130 TIGR00891 2A0112 putative sial 99.5 8.7E-13 1.9E-17 116.7 13.7 142 70-213 257-400 (405)
131 KOG0253 Synaptic vesicle trans 99.5 2.4E-13 5.1E-18 113.8 9.3 132 98-231 391-522 (528)
132 KOG2325 Predicted transporter/ 99.5 4.4E-12 9.5E-17 111.7 17.4 186 46-232 29-233 (488)
133 KOG0254 Predicted transporter 99.5 4.5E-12 9.8E-17 115.9 18.0 233 1-243 238-492 (513)
134 PRK15075 citrate-proton sympor 99.5 5.2E-12 1.1E-16 113.2 17.8 140 64-205 251-396 (434)
135 PRK11273 glpT sn-glycerol-3-ph 99.5 4.5E-12 9.7E-17 114.2 17.2 170 55-227 257-433 (452)
136 PRK10406 alpha-ketoglutarate t 99.4 5.5E-12 1.2E-16 112.9 17.3 159 69-230 261-425 (432)
137 TIGR00889 2A0110 nucleoside tr 99.4 7.6E-12 1.7E-16 111.4 17.6 165 58-232 9-183 (418)
138 PRK12307 putative sialic acid 99.4 5.6E-12 1.2E-16 112.6 16.6 137 70-209 250-388 (426)
139 TIGR00792 gph sugar (Glycoside 99.4 1.3E-12 2.7E-17 117.1 12.4 162 67-231 15-197 (437)
140 TIGR00792 gph sugar (Glycoside 99.4 1.1E-11 2.3E-16 111.1 17.2 116 90-205 259-382 (437)
141 PLN00028 nitrate transmembrane 99.4 5.7E-12 1.2E-16 114.1 15.5 154 71-229 272-433 (476)
142 TIGR02718 sider_RhtX_FptX side 99.4 1.3E-11 2.9E-16 109.0 17.5 175 53-230 3-185 (390)
143 PRK11663 regulatory protein Uh 99.4 7.7E-12 1.7E-16 112.0 15.9 168 56-226 248-421 (434)
144 PF05977 MFS_3: Transmembrane 99.4 8E-12 1.7E-16 113.3 16.0 165 62-229 21-190 (524)
145 PRK11128 putative 3-phenylprop 99.4 2.1E-11 4.6E-16 107.4 17.2 150 70-224 224-374 (382)
146 COG2807 CynX Cyanate permease 99.4 3.7E-11 8E-16 100.8 17.0 160 65-228 26-185 (395)
147 KOG2504 Monocarboxylate transp 99.4 7.8E-12 1.7E-16 112.9 14.0 175 53-229 300-476 (509)
148 PRK10504 putative transporter; 99.4 1.2E-11 2.7E-16 111.9 15.5 144 60-205 270-417 (471)
149 TIGR00882 2A0105 oligosacchari 99.4 1.1E-11 2.4E-16 109.7 14.8 133 90-223 256-389 (396)
150 TIGR02332 HpaX 4-hydroxyphenyl 99.4 1E-11 2.2E-16 110.5 14.1 162 56-217 247-409 (412)
151 TIGR00900 2A0121 H+ Antiporter 99.4 8.9E-12 1.9E-16 108.5 13.3 131 72-204 232-364 (365)
152 PRK11010 ampG muropeptide tran 99.4 4.1E-11 8.8E-16 108.9 17.2 154 75-231 247-405 (491)
153 TIGR02718 sider_RhtX_FptX side 99.3 4.6E-11 9.9E-16 105.5 16.3 150 72-224 229-386 (390)
154 COG2270 Permeases of the major 99.3 1.5E-11 3.3E-16 105.2 12.4 160 70-231 271-431 (438)
155 PF05977 MFS_3: Transmembrane 99.3 6.2E-11 1.3E-15 107.6 15.8 153 69-224 236-389 (524)
156 COG3104 PTR2 Dipeptide/tripept 99.3 2.3E-11 5.1E-16 106.3 12.2 174 53-229 23-206 (498)
157 TIGR00788 fbt folate/biopterin 99.3 4.6E-11 9.9E-16 107.9 14.4 173 53-231 28-211 (468)
158 COG2271 UhpC Sugar phosphate p 99.3 1.2E-10 2.5E-15 99.8 15.7 171 52-225 253-430 (448)
159 TIGR00896 CynX cyanate transpo 99.3 4.7E-11 1E-15 104.1 13.6 137 69-208 215-353 (355)
160 TIGR01272 gluP glucose/galacto 99.3 1.3E-10 2.8E-15 99.3 15.6 156 53-214 142-300 (310)
161 TIGR00903 2A0129 major facilit 99.3 2.5E-10 5.4E-15 99.9 17.5 168 54-230 195-366 (368)
162 COG2814 AraJ Arabinose efflux 99.3 1.5E-10 3.3E-15 99.8 15.7 154 70-228 231-385 (394)
163 KOG0252 Inorganic phosphate tr 99.3 4.1E-12 8.8E-17 109.4 6.0 186 51-243 304-506 (538)
164 TIGR00712 glpT glycerol-3-phos 99.3 5.9E-11 1.3E-15 106.5 13.6 160 69-231 269-436 (438)
165 TIGR00881 2A0104 phosphoglycer 99.3 2.3E-11 5E-16 106.4 9.7 151 57-210 222-378 (379)
166 TIGR00894 2A0114euk Na(+)-depe 99.3 1.4E-10 3.1E-15 104.8 14.9 174 53-229 263-450 (465)
167 PF06813 Nodulin-like: Nodulin 99.3 2.5E-10 5.5E-15 93.2 14.6 161 66-231 17-184 (250)
168 PRK08633 2-acyl-glycerophospho 99.3 1.4E-10 3E-15 116.1 15.9 144 72-217 253-398 (1146)
169 PRK15402 multidrug efflux syst 99.2 4.2E-10 9E-15 100.0 16.7 145 73-221 237-387 (406)
170 PRK10213 nepI ribonucleoside t 99.2 8.8E-10 1.9E-14 97.5 18.1 142 74-219 240-381 (394)
171 PRK10054 putative transporter; 99.2 1.5E-10 3.2E-15 102.5 12.9 135 89-225 245-380 (395)
172 PRK11646 multidrug resistance 99.2 3E-10 6.6E-15 100.7 14.8 151 72-224 229-383 (400)
173 PRK10429 melibiose:sodium symp 99.2 5.3E-10 1.1E-14 101.3 16.2 112 91-202 269-392 (473)
174 PRK09669 putative symporter Ya 99.2 1.7E-10 3.6E-15 103.8 12.8 170 58-230 16-206 (444)
175 PRK09848 glucuronide transport 99.2 7.4E-10 1.6E-14 99.7 17.0 111 92-202 268-387 (448)
176 PF03825 Nuc_H_symport: Nucleo 99.2 4.9E-10 1.1E-14 98.7 15.1 175 55-231 211-398 (400)
177 KOG2563 Permease of the major 99.2 1.2E-09 2.6E-14 94.3 16.4 158 44-204 38-203 (480)
178 TIGR00901 2A0125 AmpG-related 99.2 3.9E-10 8.4E-15 98.3 13.3 121 65-187 223-355 (356)
179 TIGR00711 efflux_EmrB drug res 99.2 2.7E-10 5.8E-15 103.4 12.8 138 64-203 268-410 (485)
180 PRK06814 acylglycerophosphoeth 99.2 3.3E-10 7.2E-15 113.2 14.4 146 69-216 243-409 (1140)
181 PRK10091 MFS transport protein 99.2 1E-09 2.2E-14 96.7 15.9 147 75-225 224-372 (382)
182 PRK15034 nitrate/nitrite trans 99.2 3E-10 6.4E-15 101.1 12.3 155 70-227 271-452 (462)
183 KOG4686 Predicted sugar transp 99.2 4.2E-10 9E-15 91.4 11.8 149 76-228 290-442 (459)
184 COG2223 NarK Nitrate/nitrite t 99.2 2.2E-10 4.8E-15 98.1 10.7 155 70-227 237-399 (417)
185 PF03825 Nuc_H_symport: Nucleo 99.2 3.5E-09 7.7E-14 93.3 18.7 171 58-232 9-183 (400)
186 PRK11902 ampG muropeptide tran 99.2 1.7E-09 3.7E-14 96.0 16.8 148 75-229 234-390 (402)
187 TIGR00710 efflux_Bcr_CflA drug 99.2 3E-09 6.5E-14 93.5 18.1 135 73-212 228-369 (385)
188 PRK10429 melibiose:sodium symp 99.1 4.3E-10 9.3E-15 101.9 12.0 173 56-231 11-204 (473)
189 PF05631 DUF791: Protein of un 99.1 5.1E-09 1.1E-13 88.6 16.9 158 71-231 54-219 (354)
190 PRK09669 putative symporter Ya 99.1 3.2E-09 7E-14 95.5 16.6 114 91-204 267-389 (444)
191 PF07690 MFS_1: Major Facilita 99.1 4.3E-10 9.3E-15 97.5 10.5 128 66-194 221-352 (352)
192 PF13347 MFS_2: MFS/sugar tran 99.1 2.5E-10 5.4E-15 102.1 9.0 155 74-230 25-200 (428)
193 PRK14995 methyl viologen resis 99.1 1.2E-09 2.5E-14 99.7 12.6 131 70-202 278-412 (495)
194 PF01306 LacY_symp: LacY proto 99.1 1.6E-09 3.5E-14 94.4 12.3 142 89-231 260-403 (412)
195 PRK10133 L-fucose transporter; 99.1 4.8E-09 1E-13 94.1 15.6 137 79-220 288-424 (438)
196 PF13347 MFS_2: MFS/sugar tran 99.1 2.7E-09 5.8E-14 95.5 13.7 145 56-202 230-383 (428)
197 COG2211 MelB Na+/melibiose sym 99.0 1.4E-08 3E-13 89.6 16.6 134 67-201 252-394 (467)
198 PRK11195 lysophospholipid tran 99.0 9.9E-09 2.1E-13 90.8 15.4 138 78-220 233-371 (393)
199 PRK11102 bicyclomycin/multidru 99.0 3.3E-08 7.1E-13 86.8 18.1 120 77-199 221-345 (377)
200 PF03137 OATP: Organic Anion T 99.0 5.8E-11 1.3E-15 108.2 -0.4 173 57-231 9-252 (539)
201 TIGR00885 fucP L-fucose:H+ sym 99.0 2.1E-08 4.6E-13 89.1 15.9 145 70-217 251-400 (410)
202 PRK11043 putative transporter; 99.0 7.5E-08 1.6E-12 85.4 19.1 130 72-204 224-358 (401)
203 PRK10473 multidrug efflux syst 99.0 1.3E-08 2.7E-13 90.0 14.0 122 77-205 230-351 (392)
204 KOG2532 Permease of the major 99.0 1.5E-08 3.3E-13 90.7 14.3 174 52-228 259-446 (466)
205 PF01306 LacY_symp: LacY proto 99.0 7E-09 1.5E-13 90.5 11.1 167 56-228 12-187 (412)
206 COG0477 ProP Permeases of the 99.0 3.2E-08 7E-13 83.3 15.1 154 65-219 16-175 (338)
207 PRK11462 putative transporter; 98.9 7.1E-08 1.5E-12 87.1 17.9 111 91-201 266-385 (460)
208 KOG0255 Synaptic vesicle trans 98.9 4.3E-08 9.2E-13 90.1 16.5 140 92-232 354-496 (521)
209 KOG2816 Predicted transporter 98.9 2.7E-08 5.9E-13 88.8 14.0 169 56-231 27-202 (463)
210 PRK11462 putative transporter; 98.9 4.9E-08 1.1E-12 88.1 15.0 163 58-222 16-197 (460)
211 KOG3762 Predicted transporter 98.9 3.7E-09 8E-14 93.1 7.3 166 59-227 379-545 (618)
212 COG2807 CynX Cyanate permease 98.9 1.2E-07 2.6E-12 80.1 15.0 160 64-226 221-382 (395)
213 TIGR00924 yjdL_sub1_fam amino 98.9 1.5E-07 3.2E-12 85.4 17.0 130 90-220 314-459 (475)
214 TIGR00788 fbt folate/biopterin 98.9 4.1E-08 8.8E-13 88.8 12.9 150 79-230 281-447 (468)
215 KOG3626 Organic anion transpor 98.8 9.9E-09 2.1E-13 94.5 8.4 177 53-231 99-345 (735)
216 COG2211 MelB Na+/melibiose sym 98.8 1.7E-07 3.6E-12 82.9 15.3 170 54-225 15-203 (467)
217 PRK09848 glucuronide transport 98.8 1.5E-07 3.3E-12 84.7 15.7 140 58-199 15-173 (448)
218 KOG4686 Predicted sugar transp 98.8 3.8E-09 8.2E-14 86.0 4.0 142 61-204 54-199 (459)
219 PRK11652 emrD multidrug resist 98.8 6.6E-07 1.4E-11 79.2 18.7 127 75-204 231-361 (394)
220 PF01770 Folate_carrier: Reduc 98.8 3.1E-07 6.8E-12 79.9 15.8 159 74-234 27-187 (412)
221 PRK09584 tppB putative tripept 98.8 2.6E-07 5.7E-12 84.3 15.7 108 91-198 319-439 (500)
222 TIGR00886 2A0108 nitrite extru 98.7 3.3E-08 7.1E-13 86.4 7.9 117 70-189 244-365 (366)
223 TIGR00926 2A1704 Peptide:H+ sy 98.7 7.3E-07 1.6E-11 83.2 14.5 149 75-226 12-179 (654)
224 PRK10207 dipeptide/tripeptide 98.6 1.5E-06 3.3E-11 79.0 15.2 110 91-200 312-438 (489)
225 COG0738 FucP Fucose permease [ 98.6 1E-06 2.2E-11 75.6 12.9 155 52-212 237-392 (422)
226 KOG3764 Vesicular amine transp 98.6 1.7E-07 3.7E-12 80.0 8.2 162 56-220 275-445 (464)
227 TIGR01301 GPH_sucrose GPH fami 98.5 4.7E-06 1E-10 74.9 16.1 180 52-231 259-474 (477)
228 PF05978 UNC-93: Ion channel r 98.5 7.5E-06 1.6E-10 62.0 14.1 108 92-200 41-148 (156)
229 PRK15403 multidrug efflux syst 98.5 1.1E-05 2.5E-10 71.8 17.1 140 70-215 237-383 (413)
230 PF03209 PUCC: PUCC protein; 98.5 9.6E-06 2.1E-10 70.1 15.6 134 77-213 6-161 (403)
231 PF06609 TRI12: Fungal trichot 98.5 4.9E-06 1.1E-10 76.3 14.4 145 52-196 311-460 (599)
232 KOG2533 Permease of the major 98.4 8.7E-06 1.9E-10 73.5 14.6 158 53-213 275-440 (495)
233 PF11700 ATG22: Vacuole efflux 98.4 1.9E-05 4.2E-10 71.3 16.6 144 90-233 72-252 (477)
234 PF06779 DUF1228: Protein of u 98.4 1.4E-06 3.1E-11 58.2 6.8 80 63-144 4-83 (85)
235 TIGR01272 gluP glucose/galacto 98.4 2.7E-06 5.8E-11 72.8 9.8 91 137-227 6-111 (310)
236 PF03209 PUCC: PUCC protein; 98.3 3E-05 6.6E-10 67.1 15.5 146 78-225 236-394 (403)
237 PF12832 MFS_1_like: MFS_1 lik 98.3 2.1E-06 4.6E-11 56.8 6.6 68 58-127 7-74 (77)
238 PF03092 BT1: BT1 family; Int 98.3 6.9E-06 1.5E-10 73.5 11.6 154 73-230 12-177 (433)
239 PTZ00207 hypothetical protein; 98.3 2E-05 4.2E-10 72.7 13.4 174 53-227 355-550 (591)
240 TIGR00769 AAA ADP/ATP carrier 98.2 0.00034 7.3E-09 62.9 18.5 111 91-201 46-189 (472)
241 PRK15462 dipeptide/tripeptide 98.1 0.00014 3E-09 65.9 14.4 110 91-200 311-437 (493)
242 KOG2615 Permease of the major 98.0 0.00013 2.8E-09 62.5 11.3 122 79-202 290-413 (451)
243 KOG0637 Sucrose transporter an 97.9 1.6E-05 3.5E-10 69.3 5.6 145 54-200 35-202 (498)
244 PF00854 PTR2: POT family; In 97.8 0.00019 4.1E-09 63.1 10.6 109 119-228 2-122 (372)
245 KOG2816 Predicted transporter 97.8 0.00063 1.4E-08 61.1 13.6 122 77-201 268-390 (463)
246 PF02487 CLN3: CLN3 protein; 97.6 0.0011 2.5E-08 58.0 11.8 108 91-200 284-394 (402)
247 COG2270 Permeases of the major 97.6 0.0025 5.5E-08 55.6 13.5 96 86-181 56-155 (438)
248 KOG1237 H+/oligopeptide sympor 97.6 0.0039 8.5E-08 57.6 15.5 154 70-226 57-242 (571)
249 PRK03612 spermidine synthase; 97.5 0.011 2.4E-07 54.2 17.6 138 87-225 49-194 (521)
250 KOG3574 Acetyl-CoA transporter 97.5 0.0039 8.4E-08 53.7 12.6 151 46-201 26-193 (510)
251 KOG3098 Uncharacterized conser 97.4 0.02 4.2E-07 51.3 16.9 108 91-199 282-410 (461)
252 KOG2563 Permease of the major 97.3 0.0018 3.9E-08 56.9 9.4 151 79-231 294-452 (480)
253 KOG3098 Uncharacterized conser 97.3 0.015 3.2E-07 52.1 14.9 105 94-199 56-160 (461)
254 COG3202 ATP/ADP translocase [E 97.3 0.052 1.1E-06 48.5 17.8 157 44-204 20-211 (509)
255 PF03092 BT1: BT1 family; Int 97.2 0.0044 9.5E-08 55.7 10.8 141 91-231 258-415 (433)
256 PF06963 FPN1: Ferroportin1 (F 97.2 0.013 2.8E-07 52.2 13.5 145 54-200 261-415 (432)
257 PF02487 CLN3: CLN3 protein; 97.1 0.0044 9.5E-08 54.4 9.8 134 91-230 62-197 (402)
258 PF03219 TLC: TLC ATP/ADP tran 97.1 0.041 8.8E-07 50.0 16.1 156 44-202 17-205 (491)
259 KOG1479 Nucleoside transporter 96.9 0.036 7.9E-07 48.5 13.6 91 141-232 117-207 (406)
260 KOG4332 Predicted sugar transp 96.9 0.0018 4E-08 53.0 5.2 97 71-170 57-154 (454)
261 PF06963 FPN1: Ferroportin1 (F 96.7 0.11 2.4E-06 46.5 15.4 167 54-223 5-194 (432)
262 COG3104 PTR2 Dipeptide/tripept 96.7 0.065 1.4E-06 48.0 13.7 108 91-198 327-451 (498)
263 TIGR00939 2a57 Equilibrative N 96.7 0.047 1E-06 49.0 13.0 108 91-199 310-430 (437)
264 TIGR00939 2a57 Equilibrative N 96.6 0.027 5.8E-07 50.6 11.0 89 140-233 105-200 (437)
265 TIGR00805 oat sodium-independe 96.6 0.011 2.4E-07 55.8 8.7 77 54-132 333-413 (633)
266 KOG2325 Predicted transporter/ 96.5 0.005 1.1E-07 55.2 5.5 72 148-220 395-466 (488)
267 KOG1330 Sugar transporter/spin 96.3 0.0055 1.2E-07 54.1 4.6 126 81-208 278-417 (493)
268 KOG3762 Predicted transporter 96.3 0.0036 7.8E-08 56.2 3.3 81 55-137 15-96 (618)
269 KOG3810 Micronutrient transpor 96.3 0.0046 9.9E-08 52.6 3.6 154 80-235 35-189 (433)
270 PF13000 Acatn: Acetyl-coenzym 96.2 0.015 3.2E-07 52.0 6.6 145 55-201 4-178 (544)
271 PF01733 Nucleoside_tran: Nucl 95.2 0.0066 1.4E-07 51.9 0.5 107 93-199 187-306 (309)
272 PF03137 OATP: Organic Anion T 95.1 0.0057 1.2E-07 56.4 0.0 148 54-203 308-514 (539)
273 KOG3097 Predicted membrane pro 95.0 0.19 4.2E-06 42.7 8.5 73 97-170 67-139 (390)
274 PF01770 Folate_carrier: Reduc 94.9 0.81 1.7E-05 40.6 12.6 91 91-181 288-380 (412)
275 KOG1479 Nucleoside transporter 94.1 0.29 6.3E-06 43.0 8.0 107 92-198 286-400 (406)
276 TIGR00806 rfc RFC reduced fola 92.7 0.94 2E-05 41.1 9.1 94 91-184 301-396 (511)
277 COG4262 Predicted spermidine s 91.8 8.2 0.00018 33.6 13.0 134 87-223 42-186 (508)
278 KOG3880 Predicted small molecu 89.2 2 4.4E-05 36.5 7.2 72 130-201 331-402 (409)
279 KOG0637 Sucrose transporter an 88.0 0.39 8.4E-06 42.8 2.4 128 92-219 336-486 (498)
280 PF01733 Nucleoside_tran: Nucl 87.2 0.18 3.9E-06 43.1 0.0 80 149-233 5-88 (309)
281 KOG4332 Predicted sugar transp 87.1 16 0.00035 30.7 11.0 96 90-185 284-388 (454)
282 TIGR00880 2_A_01_02 Multidrug 85.7 9 0.00019 27.3 8.6 41 91-131 90-130 (141)
283 KOG3880 Predicted small molecu 85.2 1.8 3.9E-05 36.8 4.8 133 91-231 65-202 (409)
284 PF13000 Acatn: Acetyl-coenzym 83.8 12 0.00026 34.2 9.6 53 142-194 406-458 (544)
285 TIGR00769 AAA ADP/ATP carrier 82.3 40 0.00086 30.9 15.7 68 146-214 271-339 (472)
286 PF07672 MFS_Mycoplasma: Mycop 81.2 2.5 5.5E-05 34.9 4.1 56 173-228 2-61 (267)
287 PRK10263 DNA translocase FtsK; 80.4 20 0.00044 36.7 10.6 22 96-117 60-81 (1355)
288 PF06912 DUF1275: Protein of u 80.0 28 0.00062 27.7 15.5 20 92-111 50-69 (209)
289 COG5336 Uncharacterized protei 79.0 7.3 0.00016 27.2 5.1 30 92-121 46-76 (116)
290 PF11947 DUF3464: Protein of u 77.0 28 0.0006 26.3 8.1 79 111-192 57-145 (153)
291 KOG3810 Micronutrient transpor 76.9 27 0.00059 30.5 9.0 109 91-202 274-384 (433)
292 TIGR01666 YCCS hypothetical me 71.4 94 0.002 30.1 12.2 108 109-233 44-159 (704)
293 TIGR00926 2A1704 Peptide:H+ sy 65.0 32 0.00069 33.0 7.8 83 141-224 565-647 (654)
294 COG1288 Predicted membrane pro 64.9 84 0.0018 28.3 9.5 21 175-195 418-438 (481)
295 PF12805 FUSC-like: FUSC-like 63.5 78 0.0017 26.6 9.2 37 122-158 3-40 (284)
296 KOG3626 Organic anion transpor 63.2 21 0.00046 34.3 6.1 79 53-133 394-476 (735)
297 TIGR01667 YCCS_YHJK integral m 62.5 1.1E+02 0.0024 29.7 10.8 44 115-158 54-98 (701)
298 COG3202 ATP/ADP translocase [E 61.9 1.3E+02 0.0029 27.7 13.9 76 144-220 287-364 (509)
299 PF03219 TLC: TLC ATP/ADP tran 61.9 1.3E+02 0.0029 27.7 17.3 69 145-214 286-355 (491)
300 PF07672 MFS_Mycoplasma: Mycop 58.2 1.1E+02 0.0024 25.5 10.4 100 92-192 145-254 (267)
301 COG5547 Small integral membran 58.1 26 0.00056 21.3 3.7 39 118-156 8-46 (62)
302 PF02694 UPF0060: Uncharacteri 56.9 22 0.00049 24.8 3.8 47 91-137 57-103 (107)
303 PF06779 DUF1228: Protein of u 56.5 58 0.0013 21.8 7.6 69 152-224 5-73 (85)
304 PRK14229 camphor resistance pr 56.5 68 0.0015 22.6 6.8 23 150-172 58-80 (108)
305 KOG3574 Acetyl-CoA transporter 55.7 1E+02 0.0023 27.6 8.4 61 145-205 373-433 (510)
306 PF02632 BioY: BioY family; I 55.0 52 0.0011 24.7 6.0 24 95-118 60-83 (148)
307 COG1268 BioY Uncharacterized c 54.9 49 0.0011 25.9 5.9 23 95-117 89-111 (184)
308 KOG1237 H+/oligopeptide sympor 51.3 41 0.00088 31.7 5.9 62 141-202 458-519 (571)
309 PRK02237 hypothetical protein; 51.2 38 0.00083 23.8 4.3 47 91-137 59-105 (109)
310 PF07760 DUF1616: Protein of u 48.6 1.7E+02 0.0036 24.8 9.3 57 144-201 22-78 (287)
311 PF07857 DUF1632: CEO family ( 48.3 1.6E+02 0.0035 24.5 9.2 24 207-230 114-137 (254)
312 PRK14230 camphor resistance pr 47.5 1E+02 0.0023 22.1 7.4 24 148-171 60-83 (119)
313 PF10785 NADH-u_ox-rdase: NADH 47.5 62 0.0014 21.7 4.8 41 100-140 30-77 (86)
314 PF03547 Mem_trans: Membrane t 46.0 1.7E+02 0.0036 25.8 8.8 17 280-296 240-256 (385)
315 PF11151 DUF2929: Protein of u 45.2 71 0.0015 19.5 5.3 44 187-231 12-55 (57)
316 TIGR02230 ATPase_gene1 F0F1-AT 43.1 1.1E+02 0.0024 21.2 5.9 22 184-205 50-71 (100)
317 PF13937 DUF4212: Domain of un 42.2 85 0.0018 20.9 4.7 20 100-119 58-77 (81)
318 COG5336 Uncharacterized protei 42.0 70 0.0015 22.5 4.4 29 172-200 37-66 (116)
319 PLN02601 beta-carotene hydroxy 41.8 2.1E+02 0.0045 24.0 8.1 21 95-115 137-157 (303)
320 PF15050 SCIMP: SCIMP protein 41.2 18 0.00039 25.7 1.5 14 205-218 2-15 (133)
321 PF05631 DUF791: Protein of un 41.2 2.5E+02 0.0054 24.7 16.3 101 101-201 176-302 (354)
322 COG3619 Predicted membrane pro 40.8 2E+02 0.0043 23.4 15.8 31 87-117 54-84 (226)
323 PF00854 PTR2: POT family; In 40.7 1E+02 0.0022 26.9 6.6 47 91-137 75-121 (372)
324 PF11299 DUF3100: Protein of u 40.2 30 0.00066 28.0 2.8 46 148-194 178-223 (241)
325 PF04550 Phage_holin_2: Phage 37.6 89 0.0019 21.1 4.2 34 141-174 31-64 (89)
326 PF10225 DUF2215: Uncharacteri 37.5 2.4E+02 0.0051 23.4 9.1 24 165-190 56-79 (249)
327 PF04474 DUF554: Protein of un 36.8 2E+02 0.0043 23.4 7.0 61 95-156 9-69 (226)
328 KOG4830 Predicted sugar transp 36.6 31 0.00068 28.9 2.4 64 56-121 22-94 (412)
329 COG1422 Predicted membrane pro 36.4 2.2E+02 0.0047 22.6 8.9 11 188-198 33-43 (201)
330 PF01528 Herpes_glycop: Herpes 36.1 2.1E+02 0.0045 25.4 7.4 38 136-173 229-266 (374)
331 PF09527 ATPase_gene1: Putativ 35.2 1E+02 0.0022 18.4 5.7 32 96-127 8-40 (55)
332 TIGR03802 Asp_Ala_antiprt aspa 33.3 4.2E+02 0.0092 25.0 10.1 81 91-173 453-534 (562)
333 PRK14212 camphor resistance pr 33.3 1.9E+02 0.0042 21.1 7.7 23 150-172 68-90 (128)
334 PF02990 EMP70: Endomembrane p 33.0 1.2E+02 0.0027 28.2 6.0 30 172-201 292-321 (521)
335 PLN02332 membrane bound O-acyl 32.9 3.1E+02 0.0068 25.1 8.5 46 185-230 408-453 (465)
336 PF09605 Trep_Strep: Hypotheti 32.8 2.4E+02 0.0052 22.1 7.1 39 97-135 37-75 (186)
337 COG0385 Predicted Na+-dependen 32.6 3.3E+02 0.0071 23.5 10.2 111 115-229 64-185 (319)
338 PRK14200 camphor resistance pr 32.4 2E+02 0.0043 21.0 7.5 24 148-171 69-92 (127)
339 KOG2881 Predicted membrane pro 32.3 3E+02 0.0065 23.0 10.1 6 209-214 131-136 (294)
340 TIGR00986 3a0801s05tom22 mitoc 32.2 1.1E+02 0.0024 22.8 4.4 24 165-188 57-80 (145)
341 PF10183 ESSS: ESSS subunit of 32.0 1.1E+02 0.0024 21.4 4.4 25 207-231 59-84 (105)
342 PF04120 Iron_permease: Low af 31.2 1.9E+02 0.0041 21.3 5.5 46 184-231 18-63 (132)
343 KOG2927 Membrane component of 30.9 26 0.00057 30.2 1.2 8 187-194 224-231 (372)
344 PF15061 DUF4538: Domain of un 30.7 99 0.0021 19.0 3.3 19 207-225 5-23 (58)
345 PRK10692 hypothetical protein; 30.4 1.4E+02 0.003 20.1 4.2 17 117-133 3-19 (92)
346 TIGR00844 c_cpa1 na(+)/h(+) an 30.2 5.5E+02 0.012 25.5 9.8 11 53-63 13-23 (810)
347 TIGR00801 ncs2 uracil-xanthine 30.2 4.1E+02 0.0088 23.9 13.0 91 90-180 39-133 (415)
348 COG1811 Uncharacterized membra 29.2 3.1E+02 0.0067 22.2 7.5 53 95-147 10-62 (228)
349 COG1079 Uncharacterized ABC-ty 29.2 3.7E+02 0.008 23.1 11.3 94 103-200 22-117 (304)
350 PF04281 Tom22: Mitochondrial 29.0 1.1E+02 0.0024 22.7 4.0 23 165-187 59-81 (137)
351 PRK14228 camphor resistance pr 28.6 2.3E+02 0.005 20.5 7.7 22 150-171 66-87 (122)
352 TIGR03647 Na_symport_sm probab 28.5 1.8E+02 0.0038 19.1 5.9 20 100-119 54-73 (77)
353 PF00860 Xan_ur_permease: Perm 28.5 1.7E+02 0.0037 25.9 6.0 37 92-131 37-73 (389)
354 PF13038 DUF3899: Domain of un 28.5 1.6E+02 0.0036 19.7 4.7 16 209-224 4-19 (92)
355 PRK14214 camphor resistance pr 26.4 2.5E+02 0.0054 20.1 7.5 24 148-171 62-85 (118)
356 TIGR02865 spore_II_E stage II 26.2 5.7E+02 0.012 25.3 9.4 26 145-170 187-212 (764)
357 COG4769 Predicted membrane pro 26.1 1.1E+02 0.0023 23.5 3.5 50 98-153 83-132 (181)
358 PF10762 DUF2583: Protein of u 26.1 1.5E+02 0.0033 19.7 3.8 16 117-132 3-18 (89)
359 PF06570 DUF1129: Protein of u 26.0 3.4E+02 0.0073 21.6 10.0 20 209-228 178-197 (206)
360 COG2233 UraA Xanthine/uracil p 25.5 5.3E+02 0.011 23.6 11.6 100 78-179 41-143 (451)
361 PF08570 DUF1761: Protein of u 25.3 2.6E+02 0.0057 20.0 10.1 34 53-87 4-37 (126)
362 PF06645 SPC12: Microsomal sig 25.1 2E+02 0.0044 18.7 5.7 19 97-115 16-34 (76)
363 PRK09609 hypothetical protein; 25.0 3.1E+02 0.0067 23.5 6.4 7 207-213 78-84 (312)
364 PF08566 Pam17: Mitochondrial 24.4 2.6E+02 0.0056 21.7 5.4 10 98-107 89-98 (173)
365 PRK14227 camphor resistance pr 24.3 2.8E+02 0.0061 20.0 7.3 22 150-171 68-89 (124)
366 PF06341 DUF1056: Protein of u 24.2 1.9E+02 0.0042 18.1 3.8 15 161-175 47-61 (63)
367 PRK14206 camphor resistance pr 24.0 2.9E+02 0.0063 20.1 7.8 24 148-171 67-90 (127)
368 KOG2601 Iron transporter [Inor 23.9 1.9E+02 0.0042 25.9 5.1 116 140-259 385-500 (503)
369 PF05545 FixQ: Cbb3-type cytoc 23.6 1.6E+02 0.0035 17.1 3.6 17 215-231 18-34 (49)
370 PF11833 DUF3353: Protein of u 23.6 3.8E+02 0.0081 21.2 7.0 30 173-202 137-166 (194)
371 PRK14219 camphor resistance pr 23.3 3.1E+02 0.0066 20.1 8.3 24 148-171 65-88 (132)
372 PRK14220 camphor resistance pr 22.8 3E+02 0.0065 19.8 8.0 24 148-171 62-85 (120)
373 PF04632 FUSC: Fusaric acid re 22.7 6.7E+02 0.015 23.9 11.5 29 207-236 130-158 (650)
374 TIGR00267 conserved hypothetic 22.5 3.6E+02 0.0079 20.7 6.6 25 101-125 126-150 (169)
375 COG1230 CzcD Co/Zn/Cd efflux s 22.3 5E+02 0.011 22.2 14.4 72 54-133 28-102 (296)
376 KOG0065 Pleiotropic drug resis 22.3 5.3E+02 0.012 27.3 8.4 35 180-214 600-637 (1391)
377 PRK14205 camphor resistance pr 22.0 3.1E+02 0.0066 19.7 7.2 25 148-172 61-85 (118)
378 KOG2887 Membrane protein invol 21.8 3.9E+02 0.0084 20.7 11.0 56 115-177 106-163 (175)
379 PF02990 EMP70: Endomembrane p 21.6 2.4E+02 0.0051 26.3 5.7 23 92-114 297-319 (521)
380 PRK14215 camphor resistance pr 21.5 3.3E+02 0.0071 19.8 7.4 22 150-171 68-89 (126)
381 PTZ00265 multidrug resistance 21.4 1.1E+03 0.023 25.7 13.3 19 207-225 197-215 (1466)
382 PRK14199 camphor resistance pr 21.1 3.4E+02 0.0073 19.8 7.7 20 152-171 73-92 (128)
383 PHA03231 glycoprotein BALF4; P 20.6 1.4E+02 0.003 29.4 4.0 19 183-201 680-698 (829)
384 KOG3097 Predicted membrane pro 20.3 3E+02 0.0065 24.2 5.5 67 90-156 312-382 (390)
385 PRK14195 camphor resistance pr 20.1 3.5E+02 0.0076 19.6 7.4 24 148-171 66-89 (125)
No 1
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.96 E-value=4.4e-28 Score=225.32 Aligned_cols=208 Identities=20% Similarity=0.250 Sum_probs=183.0
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 022133 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCA 125 (302)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~ 125 (302)
.+..|..+.++.++.+..+++...++..+|.+..++|++..+. +++.+++.++.+++++++|+++||+|||++++++.
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~--g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~l 239 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGK--GMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICL 239 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 3556666677777788888888888889999999999876655 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccC-
Q 022133 126 LPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA- 204 (302)
Q Consensus 126 ~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~- 204 (302)
++.+++.++++++++++.++++|++.|++.|+..++...+++|++|++.|+..++++..+..+|.++++.++..+....
T Consensus 240 il~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G 319 (742)
T TIGR01299 240 SVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYG 319 (742)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999888765543221
Q ss_pred -----------cchHHHHHHhHHHHHHHHHHhhccCCChHHHHHhCCHHHHHHHHHHHhCCC
Q 022133 205 -----------GWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGS 255 (302)
Q Consensus 205 -----------g~w~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (302)
..||+.+++.++++++.++..+++||+|+|+..+++.+++.+.++++...+
T Consensus 320 ~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n 381 (742)
T TIGR01299 320 WSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTN 381 (742)
T ss_pred chhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCC
Confidence 139999999888888888888899999999999999999999998887543
No 2
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1e-25 Score=197.96 Aligned_cols=240 Identities=30% Similarity=0.513 Sum_probs=192.7
Q ss_pred HHHHHHHHHHHHHHhhhhccchhhhhhh--------hhcccCCcc----hhhHHHHHHHHHHHHHHHHHHHhhhhhhhHH
Q 022133 51 PHVLVATLSSFLFGYHLGVVNEPLESIS--------LDLGFNGNT----LAEGLVVSMCLGGAFIGSTLSGWIADGVGRR 118 (302)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~----~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr 118 (302)
.....+.++.+..++....+++..+.+. +.+|...++ ..++.+++++.+|.++|+++.++++||+|||
T Consensus 11 ~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK 90 (485)
T KOG0569|consen 11 LAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRK 90 (485)
T ss_pred HHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch
Confidence 3444455555777888777776554333 334533222 2367888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhh---cchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHH
Q 022133 119 RAFQLCALPMIIGASISAT---TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLL 195 (302)
Q Consensus 119 ~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~ 195 (302)
..+.++.++..++.+++.+ .+++.+++++|++.|+..|......+.|+.|..|.+.||....+...+..+|.+++..
T Consensus 91 ~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~ 170 (485)
T KOG0569|consen 91 NALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQV 170 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHH
Confidence 9999999888887776665 4788999999999999999999999999999999999999999999999999999966
Q ss_pred Hhh-cccccCcchHHHHHHhHHHHHHHHHHhhccCCChHHHHH-hCCHHHHHHHHHHHhCCCchhHHHHHHHhhc---cC
Q 022133 196 IGI-PVKEIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYK-KGRTAEAEAEFEKLLGGSHVKSSLAELSKLD---RG 270 (302)
Q Consensus 196 ~~~-~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 270 (302)
++. .+......|++.+.+..+++++.++...++||+|+|+.. +++.+||++.++.+++.++++++.++..++. +.
T Consensus 171 ~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~ 250 (485)
T KOG0569|consen 171 LGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEEL 250 (485)
T ss_pred HccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhcc
Confidence 654 344444449999999999999999999999999999977 8999999999999999987665554443322 22
Q ss_pred CCCCcccHHHhhcCCchhHH
Q 022133 271 DDGDIVKFEELLYGRHFRGR 290 (302)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~ 290 (302)
++.++.++.+++++++.|+-
T Consensus 251 ~~~~~~sl~~~~~~~~lR~~ 270 (485)
T KOG0569|consen 251 EKKKQISLRQLLKNPTLRRP 270 (485)
T ss_pred ccccCCcHHHHhcCcchhHH
Confidence 33467789999999887764
No 3
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.95 E-value=9.2e-26 Score=205.26 Aligned_cols=207 Identities=20% Similarity=0.289 Sum_probs=170.6
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhccchhhhhhhhhc-c--cCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Q 022133 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDL-G--FNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQ 122 (302)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~ 122 (302)
.+.++..+.++.++.+..+++...++...+.+..++ + ...+....+++.+...++.+++++++|+++||+|||+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~ 90 (502)
T TIGR00887 11 GWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYG 90 (502)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 345566777888889999999988888888766542 1 1122333478999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcch------hHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHH
Q 022133 123 LCALPMIIGASISATTRN------LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLI 196 (302)
Q Consensus 123 ~~~~~~~i~~~~~~~~~~------~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~ 196 (302)
++.++..++.++++++++ +..++++|++.|++.|+..+....+++|++|+++|++++++.+.+..+|.++++.+
T Consensus 91 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~ 170 (502)
T TIGR00887 91 MELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIV 170 (502)
T ss_pred HHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888887655 67899999999999999999999999999999999999999999999999888887
Q ss_pred hhcccc-----------------------cCcchHHHHHHhHHHHHHHHHHhhccCCChHHHHHhCCHH-HHHHHHHHHh
Q 022133 197 GIPVKE-----------------------IAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTA-EAEAEFEKLL 252 (302)
Q Consensus 197 ~~~~~~-----------------------~~g~w~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~-~~~~~~~~~~ 252 (302)
+..+.. ..+ ||+.+.+.++++++.++..+++||+|+|+..+++.+ ++.+.+++..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~ 249 (502)
T TIGR00887 171 ALIVLAGFKHSLEAAADEASCTGSCVPAVDYM-WRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVL 249 (502)
T ss_pred HHHHHHHhccccccccccccccccccchhccc-HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHh
Confidence 764421 123 999999998888888888889999999998877764 4555566554
Q ss_pred C
Q 022133 253 G 253 (302)
Q Consensus 253 ~ 253 (302)
+
T Consensus 250 ~ 250 (502)
T TIGR00887 250 Q 250 (502)
T ss_pred c
Confidence 4
No 4
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.94 E-value=3.1e-24 Score=195.55 Aligned_cols=248 Identities=29% Similarity=0.518 Sum_probs=191.6
Q ss_pred hhHHHHHHHHHHHHHHHhh--hhccchhhhhhhhhcccCC---cc--hhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHH
Q 022133 48 LSFPHVLVATLSSFLFGYH--LGVVNEPLESISLDLGFNG---NT--LAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRA 120 (302)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~ 120 (302)
..........++.+..+++ .+...+....+.++...+. +. ...+++.+...++.++++++.|+++|++|||+.
T Consensus 42 ~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~ 121 (513)
T KOG0254|consen 42 FVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKT 121 (513)
T ss_pred ehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 3344455566667777775 4455555555555332211 11 233799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcc
Q 022133 121 FQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (302)
Q Consensus 121 ~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~ 200 (302)
++++.++..++.+++++++++..++++|++.|+|.|+...+.+.+++|+.|++.||...+..+....+|.+++..++...
T Consensus 122 l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~ 201 (513)
T KOG0254|consen 122 LLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGT 201 (513)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999996666655
Q ss_pred ccc-CcchHHHHHHhHHHHHHHHHHhhccCCChHHHHHhCCHHHHHHHHHHHhC--CCchhHHHHHHHhhccC---CCCC
Q 022133 201 KEI-AGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLG--GSHVKSSLAELSKLDRG---DDGD 274 (302)
Q Consensus 201 ~~~-~g~w~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~ 274 (302)
.+. .+ ||..+.+..+++++..+..+++||+|+|+.++++.+++++.++.+++ +.+.+.+.++.+.+... ....
T Consensus 202 ~~~~~~-Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (513)
T KOG0254|consen 202 SKVYAG-WRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEG 280 (513)
T ss_pred ccCCcc-HHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccc
Confidence 443 24 99999999999888888888899999999999999999999999998 34444444444421111 1122
Q ss_pred cccHHHhhcCCchhHHHHHHHH
Q 022133 275 IVKFEELLYGRHFRGRYHALVY 296 (302)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
+..+.++++....++....+..
T Consensus 281 ~~~~~~l~~~~~~~~~~i~~~l 302 (513)
T KOG0254|consen 281 KASWGELFSPKVRKRLIIGLLL 302 (513)
T ss_pred cccHHHhcCcchHHHHHHHHHH
Confidence 2257788874455555444433
No 5
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.92 E-value=1.3e-23 Score=190.17 Aligned_cols=204 Identities=28% Similarity=0.550 Sum_probs=167.9
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccchhhhhhhhhc--------ccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHH
Q 022133 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDL--------GFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRR 119 (302)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~ 119 (302)
...+.+++..++.+..+++...+++..+.+.+++ +.+.. ..+++.+++.++.+++++++|+++||+|||+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~ 86 (479)
T PRK10077 9 YIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANS--LLGFCVASALIGCIIGGALGGYCSNRFGRRD 86 (479)
T ss_pred HHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChh--HHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 3455667777888899999999998888888876 44434 4489999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhc------------chhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHH
Q 022133 120 AFQLCALPMIIGASISATT------------RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATC 187 (302)
Q Consensus 120 ~~~~~~~~~~i~~~~~~~~------------~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~ 187 (302)
+++++.++.+++.+.+++. +.+..++++|+++|++.|...+...++++|++|+++|++++++.+.+..
T Consensus 87 ~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~ 166 (479)
T PRK10077 87 SLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAII 166 (479)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHH
Confidence 9999999988887776652 2256778999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccc--------ccCcchHHHHHHhHHHHHHHHHHhhccCCChHHHHHhCCHHHHHHHHHHHhCC
Q 022133 188 LGLMGSLLIGIPVK--------EIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGG 254 (302)
Q Consensus 188 ~g~~~~~~~~~~~~--------~~~g~w~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~ 254 (302)
+|.+++++++..+. +..+ ||+.|++.+++.++..+..+++||+|+++..+++.+++.+..++..+.
T Consensus 167 ~G~~~~~~~~~~~~~~~~~~~~~~~g-Wr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~ 240 (479)
T PRK10077 167 FGQLVVYFVNYFIARSGDASWLNTDG-WRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGN 240 (479)
T ss_pred HHHHHHHHHHHHHhccCcccccccCC-hHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCC
Confidence 99998887765443 2345 999999988877777777788999999887777777766656555443
No 6
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.92 E-value=3.8e-23 Score=186.44 Aligned_cols=204 Identities=31% Similarity=0.649 Sum_probs=167.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccC------CcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q 022133 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFN------GNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAF 121 (302)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~ 121 (302)
+.+....++.++.++..++...+.+..+.+..+++.+ .+....+++.+++.++..++++++|+++||+|||+++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~ 104 (481)
T TIGR00879 25 KVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSL 104 (481)
T ss_pred HHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHH
Confidence 3344445556666777788888888888888888776 3445569999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhc---chhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHh-
Q 022133 122 QLCALPMIIGASISATT---RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIG- 197 (302)
Q Consensus 122 ~~~~~~~~i~~~~~~~~---~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~- 197 (302)
+++.++.+++.+++.+. .+++.+++.|++.|++.+...+....++.|++|+++|++++++++.+..+|.++++.++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~ 184 (481)
T TIGR00879 105 LIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGS 184 (481)
T ss_pred HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999888887553 34558899999999999999999999999999999999999999999999999999998
Q ss_pred --hcccccCcchHHHHHHhHHHHHHHHHHhhccCCChHHHHHhCCHHHHHHHHHHHh
Q 022133 198 --IPVKEIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLL 252 (302)
Q Consensus 198 --~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~~~~~~ 252 (302)
.......+ ||+.|++.++..++.++..+++||+|++...+++.+++.+..++..
T Consensus 185 ~~~~~~~~~~-w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 240 (481)
T TIGR00879 185 GKVSLNNTLG-WRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLR 240 (481)
T ss_pred HhhcCCCCcc-HHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHh
Confidence 66656666 9999999777777777777889999987766666555555444443
No 7
>TIGR00898 2A0119 cation transport protein.
Probab=99.92 E-value=8.2e-24 Score=192.82 Aligned_cols=219 Identities=24% Similarity=0.340 Sum_probs=175.9
Q ss_pred hhhhhhhhhcccCC-cchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 022133 72 EPLESISLDLGFNG-NTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFV 150 (302)
Q Consensus 72 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~ 150 (302)
+..+.+.+++|++. +....++..+++.++..++++++|+++||+|||++++++.++.+++.++.+++++++.++++|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 46677888999872 13344899999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhhccCC
Q 022133 151 VGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAE 230 (302)
Q Consensus 151 ~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~pe 230 (302)
.|++.++..+....++.|++|+++|+.+.++...+..+|.++++.++..+.+ ||+.+++.+++.++..+..+++||
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~----wr~~~~~~~i~~~~~~~~~~~~~e 265 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD----WRWLQLAVSLPTFLFFLLSWFVPE 265 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999998876643 999999988888877777788999
Q ss_pred ChHHHHHhCCHHHHHHHHHHHhCCCch--hHHHHHHH-hhccCCCCCcccHHHhhcCCchhHHHHHH
Q 022133 231 SPHWLYKKGRTAEAEAEFEKLLGGSHV--KSSLAELS-KLDRGDDGDIVKFEELLYGRHFRGRYHAL 294 (302)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (302)
+|+++..+++.+++.+.+++..+.+.. .++..+.. .++..++..+.++.++++++..+...+.+
T Consensus 266 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 332 (505)
T TIGR00898 266 SPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCL 332 (505)
T ss_pred ChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHH
Confidence 999998888888887777665433221 11111111 11111112235788999888877765544
No 8
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.92 E-value=8.8e-23 Score=185.16 Aligned_cols=184 Identities=18% Similarity=0.225 Sum_probs=151.9
Q ss_pred HHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchh--hHH--HHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q 022133 51 PHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLA--EGL--VVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (302)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~ 126 (302)
+.+....++.++.+++...++...|.+.++++.+.++.. .+. +.++..++..+|++++|+++||+|||+++.++.+
T Consensus 16 ~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~ 95 (490)
T PRK10642 16 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIV 95 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 345667788899999999999999999888865544321 111 2477788999999999999999999999999999
Q ss_pred HHHHHHHHHhhcchhHH--------HHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhh
Q 022133 127 PMIIGASISATTRNLIG--------MLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGI 198 (302)
Q Consensus 127 ~~~i~~~~~~~~~~~~~--------~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~ 198 (302)
+++++++++++++++.. ++++|+++|++.|+.++....+++|++|+++||+..++...+..+|..+++.+..
T Consensus 96 l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~ 175 (490)
T PRK10642 96 IMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVV 175 (490)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999764 7899999999999999999999999999999999999988888888877776554
Q ss_pred ccc--------ccCcchHHHHHHhHHHHHHHHHHhhccCCChHHH
Q 022133 199 PVK--------EIAGWWRICFWVSIVPAAILCLAMVFCAESPHWL 235 (302)
Q Consensus 199 ~~~--------~~~g~w~~~~~~~~~~~~~~~~~~~~~pe~~~~~ 235 (302)
.+. ...| ||+.|++.++++++++++..++||+|++.
T Consensus 176 ~~~~~~~~~~~~~~g-WR~~f~i~~~~~l~~~~~~~~~~esp~~~ 219 (490)
T PRK10642 176 LISTIVGEANFLDWG-WRIPFFIALPLGIIGLYLRHALEETPAFQ 219 (490)
T ss_pred HHHHhcCHHHhcCcc-HHHHHHHHHHHHHHHHHHHHcCCCChhHH
Confidence 332 2345 99999998777776666667789998764
No 9
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.91 E-value=6.1e-23 Score=182.22 Aligned_cols=182 Identities=17% Similarity=0.172 Sum_probs=161.1
Q ss_pred hHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHH
Q 022133 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (302)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~ 128 (302)
+|+.+..+.+..+..+++...++...|.+.+++|++.++. |++.+++.+++++++++.|+++||+|||+++..+.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMF--GLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHH--HHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 4556777777888888999999999999999999887766 89999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccc------
Q 022133 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE------ 202 (302)
Q Consensus 129 ~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~------ 202 (302)
.++.+++++++++..+++.|++.|++.+...+....++.|++|+++|++++++++.+..+|..+++.+++.+.+
T Consensus 84 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 163 (412)
T TIGR02332 84 GIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMA 163 (412)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999998888999999999999999999999999999999999887753
Q ss_pred cCcchHHHHHHhHHHHHH-HHHHhhccCCChH
Q 022133 203 IAGWWRICFWVSIVPAAI-LCLAMVFCAESPH 233 (302)
Q Consensus 203 ~~g~w~~~~~~~~~~~~~-~~~~~~~~pe~~~ 233 (302)
..| ||+.|++.++++++ .++.++++||+|.
T Consensus 164 ~~g-wr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 164 LKG-WQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred ccc-hhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 245 99999997777655 4445567899874
No 10
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=5.2e-24 Score=180.24 Aligned_cols=236 Identities=15% Similarity=0.098 Sum_probs=185.7
Q ss_pred chhHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q 022133 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (302)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~ 126 (302)
+.++..+..+.+++...++....++...|.+.++.++|.++. |++.+++.+.+.++-+++|.++||.+.|..+.++++
T Consensus 25 ~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~l--G~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLi 102 (448)
T COG2271 25 RWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQL--GILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLI 102 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHH
Confidence 344555677788888888888889999999999998887776 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHh--hcccccC
Q 022133 127 PMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIG--IPVKEIA 204 (302)
Q Consensus 127 ~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~ 204 (302)
+.++.+++++++++...+.++.++.|+..|+..|.+...++.|+|+++||+..++.+++.++|+.+.|++. +.+....
T Consensus 103 lsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~ 182 (448)
T COG2271 103 LSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG 182 (448)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888 7777766
Q ss_pred cchHHHHHHhHHHHHH-HHHHhhccCCChHHHHHhCCHHHHHHHHHHHhCCCchhHHHHHHHhhccC-CCCCcccHHHhh
Q 022133 205 GWWRICFWVSIVPAAI-LCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRG-DDGDIVKFEELL 282 (302)
Q Consensus 205 g~w~~~~~~~~~~~~~-~~~~~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 282 (302)
+ ||..|++.++++++ +++.++..+++|.. .+- ...++.++++.+.+ .++++.+ ....+.-.+.++
T Consensus 183 ~-w~~~f~~pgiiaiival~~~~~~rd~Pqs---~GL-----P~ie~~~~d~~e~~----~~~~~~~~ls~~~i~~~YVL 249 (448)
T COG2271 183 G-WRAAFYFPGIIAIIVALILLFLLRDRPQS---EGL-----PPIEEYRGDPLEIY----EEEKENEGLTAWQIFVKYVL 249 (448)
T ss_pred c-hhHHHHHHHHHHHHHHHHHHHHhCCCccc---cCC-----CCHHHhhcCchhhh----hhhccCCCccHHHHHHHHHH
Confidence 6 99999998777666 55566667777642 111 12222222221111 0001001 111233455677
Q ss_pred cCCchhHHHHHHHHH
Q 022133 283 YGRHFRGRYHALVYI 297 (302)
Q Consensus 283 ~~~~~~~~~~~~~~~ 297 (302)
+||..+.+.++.++.
T Consensus 250 ~Nk~iW~la~a~vfv 264 (448)
T COG2271 250 KNKLIWLLALANVFV 264 (448)
T ss_pred cChHHHHHHHHHHHH
Confidence 888888777766654
No 11
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.90 E-value=2.9e-22 Score=171.47 Aligned_cols=179 Identities=23% Similarity=0.287 Sum_probs=166.7
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH
Q 022133 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (302)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~ 127 (302)
..+..++.+.++.|..+....+....+|.+.+|+|.+.+.. |+..++|.++..++.++...+.||+.||++++..+.+
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~a--G~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~l 87 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAA--GQLITAYALGVALGAPLLALLTGRLERRRLLLGLLAL 87 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH
Confidence 34556778888899999999999999999999999988877 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcch
Q 022133 128 MIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWW 207 (302)
Q Consensus 128 ~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w 207 (302)
++++++++++++|+..++++|++.|+..|..+++...+..++.|+++|++++++...+.+++.++|..++.++.+..| |
T Consensus 88 Fi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~G-W 166 (394)
T COG2814 88 FIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFG-W 166 (394)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhh-H
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHHhHHHHHHHHHH-hhccC
Q 022133 208 RICFWVSIVPAAILCLA-MVFCA 229 (302)
Q Consensus 208 ~~~~~~~~~~~~~~~~~-~~~~p 229 (302)
|..|++.+..+++.++. +..+|
T Consensus 167 R~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 167 RATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999988887776554 45577
No 12
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.90 E-value=3.2e-22 Score=176.97 Aligned_cols=186 Identities=22% Similarity=0.305 Sum_probs=165.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH
Q 022133 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (302)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~ 127 (302)
.+++....+.++.+..+++....++..|.+.+++|.+..+. +++.+++.++..+++++.|+++||+|||++++.+.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~ 86 (405)
T TIGR00891 9 AQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDA--ASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVL 86 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 45566777888888999999999999999999999887766 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCc-c
Q 022133 128 MIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG-W 206 (302)
Q Consensus 128 ~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g-~ 206 (302)
.+++.+++++.++++.+++.|++.|++.+...+....++.|++|+++|+++.++.+.+..+|..+++.+++.+.+..+ .
T Consensus 87 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 166 (405)
T TIGR00891 87 FSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDG 166 (405)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999888776543 3
Q ss_pred hHHHHHHhHHHHHHHHHHhhccCCChHHH
Q 022133 207 WRICFWVSIVPAAILCLAMVFCAESPHWL 235 (302)
Q Consensus 207 w~~~~~~~~~~~~~~~~~~~~~pe~~~~~ 235 (302)
||+.|++.++..++.++....+||++.+.
T Consensus 167 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 195 (405)
T TIGR00891 167 WRALFFISILPIIFALWLRKNIPEAEDWK 195 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChhHH
Confidence 99999887777766666667789886543
No 13
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.90 E-value=4.6e-27 Score=211.22 Aligned_cols=231 Identities=31% Similarity=0.575 Sum_probs=183.6
Q ss_pred HHHHHHHHhhhhccchhhhhhh--hhcccCCc-------chhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH
Q 022133 57 TLSSFLFGYHLGVVNEPLESIS--LDLGFNGN-------TLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (302)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~ 127 (302)
.++.+..+++...++...+... ...+.+.+ +...++..+...+|..+|++++|+++||+|||+.++++.++
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~ 85 (451)
T PF00083_consen 6 SLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALL 85 (451)
T ss_pred HHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 4455777787777665554443 22222221 12347889999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcc---hhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccC
Q 022133 128 MIIGASISATTR---NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (302)
Q Consensus 128 ~~i~~~~~~~~~---~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 204 (302)
.+++.++.++++ ++..+.++|++.|++.|+..+....++.|..|++.|+...++.+.+..+|.+++..++..+....
T Consensus 86 ~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 165 (451)
T PF00083_consen 86 MIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS 165 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999 99999999999999999999999999999999999999999999999999998888876653322
Q ss_pred c--chHHHHHHhHHHHHHHHHHhhccCCChHHHHHhCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCCcccHHHhh
Q 022133 205 G--WWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELL 282 (302)
Q Consensus 205 g--~w~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (302)
+ .||..+++.++++++.++..+++||||+|+..+++.+|+++.++++.+.+..+++.++...+.++.++.+.++.+++
T Consensus 166 ~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 245 (451)
T PF00083_consen 166 DNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLF 245 (451)
T ss_pred ccccccccccccccccccccccccccccccceecccccccccccccccccccccccccccccccccccccccceeeeecc
Confidence 2 39999999999988888888899999999999999999998888866554444444443333333333336788888
Q ss_pred cCCch
Q 022133 283 YGRHF 287 (302)
Q Consensus 283 ~~~~~ 287 (302)
+++..
T Consensus 246 ~~~~~ 250 (451)
T PF00083_consen 246 RNKKY 250 (451)
T ss_pred ccccc
Confidence 87653
No 14
>TIGR00895 2A0115 benzoate transport.
Probab=99.90 E-value=3.2e-22 Score=176.34 Aligned_cols=187 Identities=26% Similarity=0.365 Sum_probs=159.0
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH
Q 022133 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (302)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~ 127 (302)
..++.+....+..+..++......++.|.+.+++|.+..+. +++.+...++..++.++.|+++||+|||+.++.+.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 14 YQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQL--GFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHH--HHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 33445555566666667777777788899999988876655 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcch
Q 022133 128 MIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWW 207 (302)
Q Consensus 128 ~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w 207 (302)
.+++.+++.+.++++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|..+++.+++.+.+..+ |
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-~ 170 (398)
T TIGR00895 92 FSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFG-W 170 (398)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccc-c
Confidence 999998888899999999999999999999999999999999999999999999999999999999999999888877 8
Q ss_pred HHHHHHhH-HHHHHHHHHhhccCCChHHHHH
Q 022133 208 RICFWVSI-VPAAILCLAMVFCAESPHWLYK 237 (302)
Q Consensus 208 ~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~ 237 (302)
+..+++.+ +..+..++..+++||++++..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (398)
T TIGR00895 171 RSLFYVGGIAPLLLLLLLMRFLPESIDFLVS 201 (398)
T ss_pred eeehhhhhhHHHHHHHHHHHhCCCCChHHHh
Confidence 99888875 4444455566778988765443
No 15
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.90 E-value=6e-22 Score=176.74 Aligned_cols=182 Identities=23% Similarity=0.342 Sum_probs=157.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH
Q 022133 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (302)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~ 127 (302)
.+++.+..+.++.+..+++.....+..|.+.+++|.+..+. +++.+++.++..++++++|+++||+|||++++++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~--~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~ 92 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEG--AFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 34445667777778888888888889999999999887665 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcch
Q 022133 128 MIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWW 207 (302)
Q Consensus 128 ~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w 207 (302)
.+++.++++++++++.++++|++.|++.+..++....++.|++|+++|+++.++...+..+|.++++.+.+.+.+..+ |
T Consensus 93 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~-w 171 (426)
T PRK12307 93 YSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYG-W 171 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCC-H
Confidence 999999999999999999999999999999999999999999999999999999999999999999999888887777 9
Q ss_pred HHHHHHhHHHHHHHHHHhhccCCCh
Q 022133 208 RICFWVSIVPAAILCLAMVFCAESP 232 (302)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~pe~~ 232 (302)
|+.|++..+..++.++.....||++
T Consensus 172 ~~~f~i~~~~~~~~~~~~~~~p~~~ 196 (426)
T PRK12307 172 RAAFFVGLLPVLLVIYIRARAPESK 196 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCh
Confidence 9999886554444433333456653
No 16
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.89 E-value=6.1e-22 Score=181.14 Aligned_cols=206 Identities=25% Similarity=0.283 Sum_probs=165.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHh
Q 022133 87 TLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYV 166 (302)
Q Consensus 87 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~ 166 (302)
.....+..+++++|..+|++++|+++|++|||++++.+.++.+++.++.++++|++.+++.|++.|++.++...+...++
T Consensus 117 ~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~ 196 (521)
T KOG0255|consen 117 STLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLV 196 (521)
T ss_pred HhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhh
Confidence 33447889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhhccCCChHHHHHhCCHHHHHH
Q 022133 167 TEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEA 246 (302)
Q Consensus 167 ~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~ 246 (302)
.|++++++|+.++.+ ......++.+++..++++.. + ||+.+++..++.++.++.+++.||+|+|+..+++.+++.+
T Consensus 197 ~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~-Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~ 272 (521)
T KOG0255|consen 197 AEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--D-WRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAIK 272 (521)
T ss_pred eeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--h-HHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHHHHH
Confidence 999999999999999 66666677777777777666 4 9999999999988887777777899999999999999988
Q ss_pred HHHHHhCCC----chhHHHHHH--Hh-hccCCCCCcccHHHhhcCCchhHHHHHHHH
Q 022133 247 EFEKLLGGS----HVKSSLAEL--SK-LDRGDDGDIVKFEELLYGRHFRGRYHALVY 296 (302)
Q Consensus 247 ~~~~~~~~~----~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (302)
.+++....+ +.++..... .+ .+....+....+.++++.++++...+..++
T Consensus 273 ~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~ 329 (521)
T KOG0255|consen 273 ILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLF 329 (521)
T ss_pred HHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHH
Confidence 888875422 111212111 11 111222334668899988865555444433
No 17
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.89 E-value=4e-21 Score=171.76 Aligned_cols=181 Identities=22% Similarity=0.190 Sum_probs=143.8
Q ss_pred HHHHHHHHHHHHHHhhhhccchhhhhhhhhccc---CCcch-hhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q 022133 51 PHVLVATLSSFLFGYHLGVVNEPLESISLDLGF---NGNTL-AEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (302)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~ 126 (302)
..+....++.++..++...++...|.+.++++. +..+. ..+.+.+...++..++++++|+++||+|||+++..+.+
T Consensus 22 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~ 101 (432)
T PRK10406 22 WAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVC 101 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 345566677888899999988889999998853 22211 12233444555666999999999999999999999999
Q ss_pred HHHHHHHHHhhcchhH--------HHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhh
Q 022133 127 PMIIGASISATTRNLI--------GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGI 198 (302)
Q Consensus 127 ~~~i~~~~~~~~~~~~--------~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~ 198 (302)
+++++++++++++++. .++++|+++|++.|+.++...++++|++|+++|++..++...+...|.++++.+..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~ 181 (432)
T PRK10406 102 MMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVV 181 (432)
T ss_pred HHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888753 58899999999999999999999999999999999999988888888777776654
Q ss_pred ccc--------ccCcchHHHHHHhHHHHHHHHHHhhccCCCh
Q 022133 199 PVK--------EIAGWWRICFWVSIVPAAILCLAMVFCAESP 232 (302)
Q Consensus 199 ~~~--------~~~g~w~~~~~~~~~~~~~~~~~~~~~pe~~ 232 (302)
.+. ...| ||+.|++.++++++.++....+||+|
T Consensus 182 ~~~~~~~~~~~~~~g-Wr~~F~i~~~~~ll~~~~~~~~~e~~ 222 (432)
T PRK10406 182 VLQQTLEDAELREWG-WRIPFALGAVLAVVALWLRRQLDETS 222 (432)
T ss_pred HHHHhCCHHHHhccc-hHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 432 1345 99999998888777666656677764
No 18
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.88 E-value=2.6e-21 Score=171.57 Aligned_cols=187 Identities=22% Similarity=0.303 Sum_probs=163.6
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 022133 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCA 125 (302)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~ 125 (302)
.+++|..+.++.+..+..+++....+...|.+.+++|.+.++. +++.+...++..+++++.|+++||+|||+++..+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 87 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQM--GWAFSAGILGLLPGALLGGRLADRIGRKRILIVSV 87 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 3466767777888888889998888999999999999876665 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCc
Q 022133 126 LPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (302)
Q Consensus 126 ~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 205 (302)
++..++.+++.+.++++.+++.|++.|++.+...+....++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 167 (406)
T PRK11551 88 ALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAA 167 (406)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccC
Confidence 99988888888899999999999999999999999999999999999999999999999999999999999988877777
Q ss_pred chHHHHHHhHHHHHHHH-HHhhccCCChHHH
Q 022133 206 WWRICFWVSIVPAAILC-LAMVFCAESPHWL 235 (302)
Q Consensus 206 ~w~~~~~~~~~~~~~~~-~~~~~~pe~~~~~ 235 (302)
|+..|++.+++.++.. +..+++||+|++.
T Consensus 168 -~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 197 (406)
T PRK11551 168 -WRHIFYVGGVGPLLLVPLLMRWLPESRAFA 197 (406)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhCCCChhHH
Confidence 9999988765544443 4455689987654
No 19
>PRK03545 putative arabinose transporter; Provisional
Probab=99.88 E-value=1.8e-21 Score=171.72 Aligned_cols=180 Identities=19% Similarity=0.207 Sum_probs=152.6
Q ss_pred HHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH
Q 022133 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (302)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~ 129 (302)
|..++.+.++.+..........+.+|.+.+++|.+.++. ++..+.+.++..+++++.|+++||+|||+++..+.++.+
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 85 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQV--GLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFI 85 (390)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 334445555555554554455667889999999887766 899999999999999999999999999999999999999
Q ss_pred HHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHH
Q 022133 130 IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (302)
Q Consensus 130 i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~ 209 (302)
++++.++++++++.++++|+++|++.+...+....++.|++|+++|+++++++..+..+|..++|.+++.+.+..+ ||+
T Consensus 86 ~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~g-w~~ 164 (390)
T PRK03545 86 ASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLG-WRT 164 (390)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhc-HHH
Confidence 9999999999999999999999999988888899999999999999999999999999999999999999888777 999
Q ss_pred HHHHhHHHHHHHHH-HhhccCCCh
Q 022133 210 CFWVSIVPAAILCL-AMVFCAESP 232 (302)
Q Consensus 210 ~~~~~~~~~~~~~~-~~~~~pe~~ 232 (302)
.|++.++.+++..+ ...++||.|
T Consensus 165 ~f~~~~~~~~l~~~~~~~~~~~~~ 188 (390)
T PRK03545 165 TFLAIGGGALITLLLLIKLLPLLP 188 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99988776665543 344467653
No 20
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.88 E-value=1.1e-21 Score=171.29 Aligned_cols=166 Identities=15% Similarity=0.081 Sum_probs=135.2
Q ss_pred hhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHH
Q 022133 65 YHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGM 144 (302)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 144 (302)
.....+++.+|.+.+++|++..+. |++.+++.+++.+++++.|+++||+|||++++.+......+.......+++..+
T Consensus 5 ~~~~~~~~~lp~i~~~~~~s~~~~--g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (368)
T TIGR00903 5 AIWVTFSPVLSLVAEDIDVSKEEL--GLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWL 82 (368)
T ss_pred HHHHHHHhhHHHHHHHhCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 334457788999999999987665 899999999999999999999999999998766555544443333333789999
Q ss_pred HHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHH-HHH
Q 022133 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAI-LCL 223 (302)
Q Consensus 145 ~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~-~~~ 223 (302)
+++|++.|++.+.. ......++|++|+++|++++++.+.+..+|..+++.+++.+.+..| ||+.|++.++++++ .++
T Consensus 83 ~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~g-Wr~~f~~~~~l~~~~~~~ 160 (368)
T TIGR00903 83 LACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGG-LQLLIIPIAAVAAAGIIL 160 (368)
T ss_pred HHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHHHH
Confidence 99999999999864 4556667999999999999999999999999999999999988878 99999986665554 445
Q ss_pred HhhccCCChHH
Q 022133 224 AMVFCAESPHW 234 (302)
Q Consensus 224 ~~~~~pe~~~~ 234 (302)
.++++||+|++
T Consensus 161 ~~~~lp~~p~~ 171 (368)
T TIGR00903 161 VLAALPALPFQ 171 (368)
T ss_pred HHHHcCCCCCC
Confidence 56678998753
No 21
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.88 E-value=2.4e-21 Score=176.00 Aligned_cols=181 Identities=13% Similarity=0.105 Sum_probs=160.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHH
Q 022133 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (302)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~ 128 (302)
.+..+..++++.++...+...++..+|.+.+++|.+.++. +|+.+++.++..++.+++|+++||+|||++++++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~--~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~ 81 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNEL--LWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLF 81 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 3556777888899999999999999999999999877766 79999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcC-CCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcch
Q 022133 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVS-PPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWW 207 (302)
Q Consensus 129 ~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~-p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w 207 (302)
++++++++++++++.++++|+++|++.+...+.....+.+.+ |+++|+++++++.....+|..+||.+++.+.+..+ |
T Consensus 82 ~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g-w 160 (495)
T PRK14995 82 GLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY-W 160 (495)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-h
Confidence 999999999999999999999999999988887777777766 67999999999999999999999999999999888 9
Q ss_pred HHHHHHhHHHHHHHH-HHhhccCCCh
Q 022133 208 RICFWVSIVPAAILC-LAMVFCAESP 232 (302)
Q Consensus 208 ~~~~~~~~~~~~~~~-~~~~~~pe~~ 232 (302)
|+.|++....+++.+ +..+++|+++
T Consensus 161 r~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 161 GSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999998766655544 3445577754
No 22
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.88 E-value=4.9e-21 Score=159.02 Aligned_cols=204 Identities=21% Similarity=0.247 Sum_probs=176.6
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 022133 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCA 125 (302)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~ 125 (302)
-|.++.......++.....+.....+...|......|.+..+. .++....+.|..+++..+|.++|++|||+.+..+.
T Consensus 73 grfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~--~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~ 150 (528)
T KOG0253|consen 73 GRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQA--PLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTF 150 (528)
T ss_pred ccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhh--hHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhH
Confidence 3555666666667766666555556666777777777655544 79999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCc
Q 022133 126 LPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (302)
Q Consensus 126 ~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 205 (302)
...++...+.+.++|+..++++|.+.|+|.|+ .|...++-.|..|..+|+..+-+. ..+.+|.++...++..+..+.|
T Consensus 151 l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~g 228 (528)
T KOG0253|consen 151 LVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFG 228 (528)
T ss_pred HHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999 788889999999999999887777 8899999999999998888888
Q ss_pred chHHHHHHhHHHHHHHHHHhhccCCChHHHHHhCCHHHHHHHHHHHhCC
Q 022133 206 WWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGG 254 (302)
Q Consensus 206 ~w~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~ 254 (302)
|||.......+..+..+..+++||+|+++..++++.++.+.++++.+.
T Consensus 229 -wr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArm 276 (528)
T KOG0253|consen 229 -WRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARM 276 (528)
T ss_pred -HHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHh
Confidence 999998888888888889999999999999999999998888877643
No 23
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.88 E-value=5.1e-21 Score=168.94 Aligned_cols=183 Identities=17% Similarity=0.178 Sum_probs=155.0
Q ss_pred chhHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q 022133 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (302)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~ 126 (302)
|+.|..+..+.+..+..........+.+|.+.+++|++.++. ++..+++.++..+++++.|+++||+|||++++.+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~ 93 (394)
T PRK10213 16 RPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVA--GQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAV 93 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHH
Confidence 345555555555555555555455567888999999887766 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcc
Q 022133 127 PMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW 206 (302)
Q Consensus 127 ~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 206 (302)
+.+++.++++++++++.+++.|++.|++.+...+....++.|++|+++|+++.++...+.++|..++|.+++.+.+..+
T Consensus 94 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~g- 172 (394)
T PRK10213 94 LLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIG- 172 (394)
T ss_pred HHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-
Confidence 9999999988999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred hHHHHHHhHHHHHHHHHHh-hccCCCh
Q 022133 207 WRICFWVSIVPAAILCLAM-VFCAESP 232 (302)
Q Consensus 207 w~~~~~~~~~~~~~~~~~~-~~~pe~~ 232 (302)
||+.|++.++.+++..+.. ...||+|
T Consensus 173 w~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 173 WRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 9999998766665544333 3467764
No 24
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.88 E-value=4.5e-21 Score=170.27 Aligned_cols=176 Identities=19% Similarity=0.222 Sum_probs=152.0
Q ss_pred HHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHH
Q 022133 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI 134 (302)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~ 134 (302)
...+..++.........+.+|.+.+++|.+.+.. ++..+++.++++++++++|+++||+|||++++.+.++.+++.++
T Consensus 20 ~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~--~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 97 (413)
T PRK15403 20 ALILYDFAAYLTTDLIQPGIINVVRDFNADVSLA--PASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAA 97 (413)
T ss_pred HHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHH
Confidence 3344555566667778888999999999876665 78999999999999999999999999999999999999999999
Q ss_pred HhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHh
Q 022133 135 SATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS 214 (302)
Q Consensus 135 ~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~ 214 (302)
++++++++.++++|+++|++.+...+....++.|++|+++|++++++...+..+|..++|.+++.+.+..+ ||+.|++.
T Consensus 98 ~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~g-w~~~f~~~ 176 (413)
T PRK15403 98 TLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVH-WKVLFAII 176 (413)
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-HHHHHHHH
Confidence 99999999999999999999887677778889999999999999999999999999999999998887777 99999988
Q ss_pred HHHHHHHHHH-hhccCCChH
Q 022133 215 IVPAAILCLA-MVFCAESPH 233 (302)
Q Consensus 215 ~~~~~~~~~~-~~~~pe~~~ 233 (302)
++..++.++. ++++||+++
T Consensus 177 ~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 177 AVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHHHhCCCCcc
Confidence 7776666554 456888743
No 25
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.87 E-value=5.1e-23 Score=175.89 Aligned_cols=187 Identities=21% Similarity=0.259 Sum_probs=171.5
Q ss_pred CCcchhHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Q 022133 44 PSWKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL 123 (302)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~ 123 (302)
..++..+..+.++++..++...+.+.+....+.....+|++++.. |++.+.+.+++.+++|+.|+++||+.||+++.+
T Consensus 26 ~~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~--Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~v 103 (493)
T KOG1330|consen 26 LSMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSEL--GLLQTVFIVVFMIASPLFGYLADRYNRKRVIAV 103 (493)
T ss_pred cccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhc--cchhHHHHHHHHHHHHHHHHHHhhcCcceEEee
Confidence 345556667888899999999999999889999999999998877 899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhccccc
Q 022133 124 CALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI 203 (302)
Q Consensus 124 ~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 203 (302)
|..++.++.+..+++..+++++++|.+.|+|.+.+.++.+.+++|.||...|++++++++.+..+|..+|.+++..+.+.
T Consensus 104 G~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~ 183 (493)
T KOG1330|consen 104 GIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASL 183 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CcchHHHHHHhHHHHHHHHHH-hhccCCCh
Q 022133 204 AGWWRICFWVSIVPAAILCLA-MVFCAESP 232 (302)
Q Consensus 204 ~g~w~~~~~~~~~~~~~~~~~-~~~~pe~~ 232 (302)
.++||+.|+..++++++..++ .++++|++
T Consensus 184 ~~~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 184 TFWWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred ccceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 888999999988887775554 45667764
No 26
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.87 E-value=4.4e-21 Score=171.58 Aligned_cols=179 Identities=18% Similarity=0.161 Sum_probs=154.6
Q ss_pred HHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Q 022133 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (302)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~ 131 (302)
......+..+...++...++..+|.+.+++|++..+. |++.+.+.++..+++++.|+++||+|||+++.++.++.+++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~ 101 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDI--GLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGII 101 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHH
Confidence 3444555666666666677888999999999886665 89999999999999999999999999999999999999999
Q ss_pred HHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHH
Q 022133 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICF 211 (302)
Q Consensus 132 ~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~ 211 (302)
.++++++++++.+++.|++.|++.|...+....++.|++|+++|++++++++.+..+|..+++.+++.+.+..+ ||+.|
T Consensus 102 ~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-w~~~f 180 (434)
T PRK11663 102 NILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYG-WRYGM 180 (434)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-HHHHH
Confidence 99999999999999999999999998888999999999999999999999999999999999999999888777 99999
Q ss_pred HHhHHHHHHH-HHHhhccCCChH
Q 022133 212 WVSIVPAAIL-CLAMVFCAESPH 233 (302)
Q Consensus 212 ~~~~~~~~~~-~~~~~~~pe~~~ 233 (302)
++.+++.++. ++..+++||+|.
T Consensus 181 ~~~~i~~~~~~~~~~~~~~~~p~ 203 (434)
T PRK11663 181 MIAGIIAIVVGLFLCWRLRDKPQ 203 (434)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHh
Confidence 8877665543 444556788764
No 27
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.86 E-value=7.7e-21 Score=171.54 Aligned_cols=182 Identities=14% Similarity=0.153 Sum_probs=147.6
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccchhhhhhhh----------------------hcccCCcchhhHHHHHHHHHHHHHHH
Q 022133 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISL----------------------DLGFNGNTLAEGLVVSMCLGGAFIGS 105 (302)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~i~~ 105 (302)
.++....++.++......+....+...+.+.+ +++++..+. |++.+++.+++.+++
T Consensus 16 ~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--g~~~s~~~~~~~~~~ 93 (465)
T TIGR00894 16 FRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQ--GLILSSHFYGQIIIQ 93 (465)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHh--hHHHHHHHHHHHHHH
Confidence 34445555555566666666666666655544 555555444 899999999999999
Q ss_pred HHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc--chhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHH
Q 022133 106 TLSGWIADGVGRRRAFQLCALPMIIGASISATT--RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQ 183 (302)
Q Consensus 106 ~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~ 183 (302)
++.|+++||+|||+++..+.++.+++.+++.++ .++..+++.|+++|++.+...+....+++|++|+++|++++++..
T Consensus 94 ~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 173 (465)
T TIGR00894 94 IPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMST 173 (465)
T ss_pred cchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 999999999999999999999988888776543 567788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcccccC-cchHHHHHHhHHHHHHHHHHhhc-cCCCh
Q 022133 184 IATCLGLMGSLLIGIPVKEIA-GWWRICFWVSIVPAAILCLAMVF-CAESP 232 (302)
Q Consensus 184 ~~~~~g~~~~~~~~~~~~~~~-g~w~~~~~~~~~~~~~~~~~~~~-~pe~~ 232 (302)
.+..+|.++++.+++.+.+.. + ||+.|++.++.+++..+.+++ .+|+|
T Consensus 174 ~~~~~g~~i~~~l~~~l~~~~~g-w~~~f~i~~~~~~~~~~~~~~~~~~~p 223 (465)
T TIGR00894 174 SGFQLGTFIFLPISGWLCESWGG-WPMIFYVFGIVGCAWSLLWFVFPADDP 223 (465)
T ss_pred HHHHHHHHHHHHHHHHHHhccCC-CCeehhhhhHHHHHHHHHHHHHhcCCc
Confidence 999999999999999988774 6 999999987777766555544 55655
No 28
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.86 E-value=4.6e-21 Score=168.56 Aligned_cols=168 Identities=18% Similarity=0.187 Sum_probs=147.7
Q ss_pred HHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchh
Q 022133 62 LFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNL 141 (302)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~ 141 (302)
+...+...++...|.+.+++|.+..+. +++.+++.++..++.++.|+++||+|||+++..+.++.+++..++++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 82 (399)
T TIGR00893 5 INYLDRANLSFAAPMLQEDLGLSAAQY--GYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAY 82 (399)
T ss_pred HHHHHHHhhhHhHHHHHHhhCCChhhH--HHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCH
Confidence 344555667778888999999887766 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHH
Q 022133 142 IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAIL 221 (302)
Q Consensus 142 ~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~ 221 (302)
+.++++|++.|++.+...+....++.|++|+++|++++++.+....+|.++++.+++.+.+..+ ||+.|++.++..++.
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~ 161 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFS-WQWAFIIEGVLGIIW 161 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCC-chHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998888777 999998877666654
Q ss_pred HHH-hhccCCCh
Q 022133 222 CLA-MVFCAESP 232 (302)
Q Consensus 222 ~~~-~~~~pe~~ 232 (302)
.+. .++.||+|
T Consensus 162 ~~~~~~~~~~~~ 173 (399)
T TIGR00893 162 GVLWLKFIPDPP 173 (399)
T ss_pred HHHhhheecCCC
Confidence 443 44566654
No 29
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.86 E-value=2.5e-20 Score=169.58 Aligned_cols=184 Identities=21% Similarity=0.336 Sum_probs=161.4
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH
Q 022133 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (302)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~ 127 (302)
.+++.+..+.++.++..++.....+..|.+.+++|.+..+. +++.+.+.++..+++++.|+++||+|||++++++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQA--ASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 44556667777888888888888888999999999887665 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcch
Q 022133 128 MIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWW 207 (302)
Q Consensus 128 ~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w 207 (302)
.+++.+++++.++++.+++.|++.|++.+..++....++.|.+|+++|+++.++...+..+|..+++.+++.+.+..+ |
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-w 173 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWG-W 173 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-H
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999888777 9
Q ss_pred HHHHHHhHHHHHHHHHHhhccCCChHH
Q 022133 208 RICFWVSIVPAAILCLAMVFCAESPHW 234 (302)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~pe~~~~ 234 (302)
|+.|++.++..++.++.....||++++
T Consensus 174 ~~~f~~~~~~~~~~~~~~~~~p~~~~~ 200 (496)
T PRK03893 174 RALFFIGILPIIFALWLRKNLPEAEDW 200 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhh
Confidence 999988666555555555567877554
No 30
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.85 E-value=2.7e-20 Score=163.69 Aligned_cols=177 Identities=19% Similarity=0.207 Sum_probs=152.5
Q ss_pred HHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Q 022133 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~ 132 (302)
+..+.+..+..........+..|.+.+++|.+.++. +++.+++.++..+++++.|+++||+|||+.+..+.++.+++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~ 84 (385)
T TIGR00710 7 ALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIV--QMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSS 84 (385)
T ss_pred HHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHH
Confidence 344444455556677778888999999999877665 899999999999999999999999999999999999999999
Q ss_pred HHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHH
Q 022133 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFW 212 (302)
Q Consensus 133 ~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~ 212 (302)
+.+...++++.+++.|++.|++.+...+....++.|++|+++|+++.++.+....+|..+++.+++.+.+..+ |+..++
T Consensus 85 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~~~~~~ 163 (385)
T TIGR00710 85 LGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLS-WHAIFA 163 (385)
T ss_pred HHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998888777 999988
Q ss_pred HhHHHHHHHHH-HhhccCCCh
Q 022133 213 VSIVPAAILCL-AMVFCAESP 232 (302)
Q Consensus 213 ~~~~~~~~~~~-~~~~~pe~~ 232 (302)
+.++..++..+ ..++.||++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 164 FLSLAGILLSALIFFILPETL 184 (385)
T ss_pred HHHHHHHHHHHHHHHhCCCCC
Confidence 87666555443 445567764
No 31
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.85 E-value=1.3e-19 Score=163.65 Aligned_cols=177 Identities=15% Similarity=0.132 Sum_probs=138.8
Q ss_pred HHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH
Q 022133 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (302)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~ 129 (302)
++.+.......+...+......+..|.+.+++|++.++. +++.+.+.+++.+++++.|+++||+|||+++..+.++.+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~--g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~ 112 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDI--GNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTA 112 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 344445555555555556667788899999999877665 788889999999999999999999999999999999999
Q ss_pred HHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhccc----c---
Q 022133 130 IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK----E--- 202 (302)
Q Consensus 130 i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~----~--- 202 (302)
++.+++++++++..++++|++.|++.+... ....+++|++|+++||+++++.+....+|..+++.+.+.+. +
T Consensus 113 ~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~ 191 (476)
T PLN00028 113 PAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGA 191 (476)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999888899999999999999999887654 45567899999999999999988776677666655554332 1
Q ss_pred --cCcchHHHHHHhHHHHHHHHHHhhccCC
Q 022133 203 --IAGWWRICFWVSIVPAAILCLAMVFCAE 230 (302)
Q Consensus 203 --~~g~w~~~~~~~~~~~~~~~~~~~~~pe 230 (302)
..| ||+.|++.+++.++..+..+++++
T Consensus 192 ~~~~g-Wr~~f~i~g~l~l~~~l~~~~~~~ 220 (476)
T PLN00028 192 PSFTA-WRIAFFVPGLLHIIMGILVLTLGQ 220 (476)
T ss_pred cchhh-hHHHHHHHHHHHHHHHHHHHHHcC
Confidence 134 999999887777665555444443
No 32
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.85 E-value=3.8e-20 Score=162.84 Aligned_cols=177 Identities=15% Similarity=0.200 Sum_probs=155.7
Q ss_pred HHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Q 022133 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~ 132 (302)
+....+..+..+.......+.+|.+.+++|.+.++. ++..+++.++..++++++|+++||+|||+++..+.++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 82 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAA--GHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGN 82 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHH--hHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHH
Confidence 455666777777787788889999999999887765 899999999999999999999999999999999999999999
Q ss_pred HHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHH
Q 022133 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFW 212 (302)
Q Consensus 133 ~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~ 212 (302)
++++++++++.+++.|++.|++.+...+....++.|++|+++|+++++++..+..+|..++|.+++.+.+..+ ||+.|+
T Consensus 83 ~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-wr~~f~ 161 (382)
T PRK10091 83 AMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFS-WRYTFL 161 (382)
T ss_pred HHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhcc-HHHHHH
Confidence 9999999999999999999999998888888899999999999999999999999999999999998888777 999999
Q ss_pred HhHHHHHHHHH-HhhccCCCh
Q 022133 213 VSIVPAAILCL-AMVFCAESP 232 (302)
Q Consensus 213 ~~~~~~~~~~~-~~~~~pe~~ 232 (302)
+.++..++..+ ..+++||.+
T Consensus 162 ~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 162 LIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred HHHHHHHHHHHHHHHhCCCCC
Confidence 87766555443 445678763
No 33
>PRK09952 shikimate transporter; Provisional
Probab=99.85 E-value=9.2e-20 Score=163.17 Aligned_cols=183 Identities=20% Similarity=0.164 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHHHHHhhhhccchhhhh-hhhhc--ccCCcchhhHHHH-----HHHHHHHHHHHHHHHhhhhhhhHHHHH
Q 022133 50 FPHVLVATLSSFLFGYHLGVVNEPLES-ISLDL--GFNGNTLAEGLVV-----SMCLGGAFIGSTLSGWIADGVGRRRAF 121 (302)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~-----~~~~~~~~i~~~~~g~l~d~~Grr~~~ 121 (302)
++......++.+..+++...+....+. +.+++ +.+... +++. ++..++..+++++.|+++||+|||+++
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 21 RRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM---GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH---HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 345666677888888888887777664 34444 444432 4443 344566788999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcchhH--------HHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHH
Q 022133 122 QLCALPMIIGASISATTRNLI--------GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGS 193 (302)
Q Consensus 122 ~~~~~~~~i~~~~~~~~~~~~--------~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~ 193 (302)
+.+.++++++++++++++++. .++++|+++|++.|+.++....++.|++|+++|+...+..+.+..+|.+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999876 588899999999999999999999999999999999999999999998888
Q ss_pred HHHhhcccc--------cCcchHHHHHHhHHHHHHHHHHhhccCCChHHHH
Q 022133 194 LLIGIPVKE--------IAGWWRICFWVSIVPAAILCLAMVFCAESPHWLY 236 (302)
Q Consensus 194 ~~~~~~~~~--------~~g~w~~~~~~~~~~~~~~~~~~~~~pe~~~~~~ 236 (302)
..+...+.. ..+ ||+.|++.+++.++.++.....||+|++..
T Consensus 178 ~~~~~~l~~~~~~~~~~~~g-Wr~~f~~~~~~~l~~~~l~~~~~es~~~~~ 227 (438)
T PRK09952 178 TGLVSLISMMTTDEQFLSWG-WRIPFLFSIVLVLIALWVRNGMEESAEFEQ 227 (438)
T ss_pred HHHHHHHHHhCCHHHhhccC-hHHHHHHHHHHHHHHHHHHHhCCCChhHHH
Confidence 766554432 345 999999988776666555566889887543
No 34
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.85 E-value=8.6e-21 Score=161.85 Aligned_cols=191 Identities=21% Similarity=0.337 Sum_probs=153.2
Q ss_pred CcchhHHHHHHHHHHHHHHHhhhhccchhhhhhhhhc-ccC-----CcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHH
Q 022133 45 SWKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDL-GFN-----GNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRR 118 (302)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr 118 (302)
..+++.+.+.+..++.+..+++.+.++...+.+...+ +-+ .+....+.+..+.++|.++||+++|++.||+|||
T Consensus 35 ~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK 114 (538)
T KOG0252|consen 35 LQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRK 114 (538)
T ss_pred hhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Confidence 3455677788889999999999999888877665543 212 2223337888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcc-------hhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHH
Q 022133 119 RAFQLCALPMIIGASISATTR-------NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLM 191 (302)
Q Consensus 119 ~~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~ 191 (302)
+++...++++++++++++++. -..++.+.|++.|+|.|+-+|+..++++|....+.||..++.......+|..
T Consensus 115 ~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gil 194 (538)
T KOG0252|consen 115 KVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGIL 194 (538)
T ss_pred hhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHh
Confidence 999999999999998777642 1467888999999999999999999999999999999998886666666655
Q ss_pred HHHHHhhccc----c----------cCcchHHHHHHhHHHHHHHHHHhhccCCChHHH
Q 022133 192 GSLLIGIPVK----E----------IAGWWRICFWVSIVPAAILCLAMVFCAESPHWL 235 (302)
Q Consensus 192 ~~~~~~~~~~----~----------~~g~w~~~~~~~~~~~~~~~~~~~~~pe~~~~~ 235 (302)
.|.+++..+. . ..+.||..+.+++++++..+...+.+|||+++.
T Consensus 195 aG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~ 252 (538)
T KOG0252|consen 195 AGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYT 252 (538)
T ss_pred hccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHH
Confidence 5554444332 1 112499999999999998888888899999876
No 35
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.85 E-value=5.2e-21 Score=167.48 Aligned_cols=170 Identities=18% Similarity=0.136 Sum_probs=146.9
Q ss_pred HHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcc
Q 022133 60 SFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR 139 (302)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~ 139 (302)
.+....+....+...|.+.+++|.+.++. +++.++..++..+++++.|+++||+|||++++.+.++.+++.+++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 81 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLVEEIGLSKTDL--GLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST 81 (379)
T ss_pred hhHHHHhHHhhhhhhHHHHHHhCCCHhHH--HHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh
Confidence 44555666777888889999999887766 8999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHH-HHhhcccccCcchHHHHHHhHHHH
Q 022133 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSL-LIGIPVKEIAGWWRICFWVSIVPA 218 (302)
Q Consensus 140 ~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~g~w~~~~~~~~~~~ 218 (302)
+++.+++.|++.|++.+...+....++.|++|+++|+++.++.+.+..+|..+++ .+++.+.+..+ |++.|++.+++.
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 160 (379)
T TIGR00881 82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYS-WHWVFIVPGIIA 160 (379)
T ss_pred hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCC-chhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 56666666666 899988876655
Q ss_pred HH-HHHHhhccCCCh
Q 022133 219 AI-LCLAMVFCAESP 232 (302)
Q Consensus 219 ~~-~~~~~~~~pe~~ 232 (302)
++ .++..++.||+|
T Consensus 161 ~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 161 IIVSLICFLLLRDSP 175 (379)
T ss_pred HHHHHHHheeeCCCc
Confidence 54 444555677764
No 36
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.85 E-value=2.6e-20 Score=161.59 Aligned_cols=171 Identities=26% Similarity=0.466 Sum_probs=145.9
Q ss_pred HHHHHHHhhhhccchhhh-hhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh
Q 022133 58 LSSFLFGYHLGVVNEPLE-SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (302)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~ 136 (302)
++.++.........+..| .+.+++|.+..+. +++.+++.++..+++++.|+++||+|||++++++.++.+++.++..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQI--GLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCH--HHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh
Confidence 455566666667778888 7888899887776 8999999999999999999999999999999999999999866666
Q ss_pred hcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHH
Q 022133 137 TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIV 216 (302)
Q Consensus 137 ~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~ 216 (302)
++++.+.++++|++.|++.+...+....++.|++|+++|++++++.+.+..+|.+++|.+++.+.+..+ ||+.|++.++
T Consensus 81 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~-~~~~~~~~~~ 159 (352)
T PF07690_consen 81 FASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG-WRWAFLISAI 159 (352)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH-HCCHHHHHHH
T ss_pred hhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc-cccccccccc
Confidence 657777899999999999999999999999999999999999999999999999999999999997777 9999999888
Q ss_pred HHHHHHHH-hhccCCC
Q 022133 217 PAAILCLA-MVFCAES 231 (302)
Q Consensus 217 ~~~~~~~~-~~~~pe~ 231 (302)
..++..++ .++.+++
T Consensus 160 ~~~~~~il~~~~~~~~ 175 (352)
T PF07690_consen 160 LSLIAAILFILFLPEP 175 (352)
T ss_dssp HHHHHHHHHHCCC---
T ss_pred hhhhhhhhHhhhhhhc
Confidence 87776653 3445544
No 37
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.84 E-value=2.6e-20 Score=168.86 Aligned_cols=176 Identities=22% Similarity=0.323 Sum_probs=157.4
Q ss_pred HHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Q 022133 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~ 132 (302)
...+.++.++..++....++..|.+.+++|.+.++. +++.+.+.++.+++.++.|+++||+|||+.++.+.++.+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQV--QWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhh--hHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 455667778888888889999999999999887666 899999999999999999999999999999999999999999
Q ss_pred HHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHH
Q 022133 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFW 212 (302)
Q Consensus 133 ~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~ 212 (302)
++++.++++..++++|+++|++.+...+....++.|++|+++|+++++++..+..+|..++|.+++.+.+..+ ||+.|+
T Consensus 82 ~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-w~~~f~ 160 (485)
T TIGR00711 82 LLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYH-WRWIFL 160 (485)
T ss_pred HHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcC-ceehhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998888 999999
Q ss_pred HhHHHHHHHHH-HhhccCCC
Q 022133 213 VSIVPAAILCL-AMVFCAES 231 (302)
Q Consensus 213 ~~~~~~~~~~~-~~~~~pe~ 231 (302)
+.+..+++..+ ..++.||+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRD 180 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCc
Confidence 87766665444 34456665
No 38
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.84 E-value=8.4e-20 Score=161.99 Aligned_cols=182 Identities=16% Similarity=0.145 Sum_probs=152.6
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH
Q 022133 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (302)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~ 127 (302)
+.+.....+.+..+...+....+.+.+|.+.+++|.+..+. ++..+.+.++..+++++.|+++||+|||++++.+..+
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 87 (406)
T PRK15402 10 QALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWV--PTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAF 87 (406)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 33444455555666666667777788888999999876655 7889999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcch
Q 022133 128 MIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWW 207 (302)
Q Consensus 128 ~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w 207 (302)
.+++.+.+..+++++.+++.|++.|++.+...+....++.|.+|+++|++..++......+|..++|.+++.+.+..+ |
T Consensus 88 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~-w 166 (406)
T PRK15402 88 FILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP-W 166 (406)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-c
Confidence 999998888889999999999999999998888888999999999999999999888888899999999998888777 9
Q ss_pred HHHHHHhHHHHHHHHH-HhhccCCCh
Q 022133 208 RICFWVSIVPAAILCL-AMVFCAESP 232 (302)
Q Consensus 208 ~~~~~~~~~~~~~~~~-~~~~~pe~~ 232 (302)
|+.|++.++..++..+ .++..||++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 167 RGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999887666665544 344578764
No 39
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.84 E-value=1.2e-20 Score=170.42 Aligned_cols=183 Identities=17% Similarity=0.140 Sum_probs=149.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHH
Q 022133 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (302)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~ 128 (302)
.+..+.++.++.+....+...++...|.+.+++|++..+. |++.+++.+++.+++++.|+++||+|||+++.++.++.
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~ 104 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTEL--GMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILS 104 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHH
Confidence 3444555666666777788888899999999999887765 89999999999999999999999999999998888887
Q ss_pred HHHHHHHhh-----cchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhccccc
Q 022133 129 IIGASISAT-----TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI 203 (302)
Q Consensus 129 ~i~~~~~~~-----~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 203 (302)
+++.+.++. ++++..++++|++.|++.+...+....+++|++|+++||++++++..+..+|.++++.+..++...
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~ 184 (467)
T PRK09556 105 AICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANY 184 (467)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHh
Confidence 777665554 588999999999999999999899999999999999999999999999999999998887765543
Q ss_pred --CcchHHHHHHhHHHHHHH-HHHhhccCCChH
Q 022133 204 --AGWWRICFWVSIVPAAIL-CLAMVFCAESPH 233 (302)
Q Consensus 204 --~g~w~~~~~~~~~~~~~~-~~~~~~~pe~~~ 233 (302)
.++|+..|.+.+++.++. ++.+++.+++|.
T Consensus 185 ~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~ 217 (467)
T PRK09556 185 FFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPE 217 (467)
T ss_pred hccCcchhHHHHHHHHHHHHHHHHHHhCCCChh
Confidence 224888887766655544 444455666653
No 40
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.84 E-value=1.3e-19 Score=160.15 Aligned_cols=181 Identities=15% Similarity=0.222 Sum_probs=152.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHH
Q 022133 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (302)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~ 128 (302)
.++.+.+.....++..+......+.+|.+.+++|.+.++. +++.+++.++..++++++|+++||+|||+.++.+.++.
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~ 83 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAV--QAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIF 83 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHH
Confidence 3444555555555555666667778899999999887766 89999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchH
Q 022133 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (302)
Q Consensus 129 ~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~ 208 (302)
+++.+++...++++.+++.|++.|++.+...+....+..|.++.++|+.+.++.+.+..+|..++|.+++.+.+..+ ||
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~ 162 (394)
T PRK11652 84 ILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFG-WR 162 (394)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hH
Confidence 99998888889999999999999999888888888889999999999999999999999999999999999888777 99
Q ss_pred HHHHHhHHHHHHH-HHHhhccCCCh
Q 022133 209 ICFWVSIVPAAIL-CLAMVFCAESP 232 (302)
Q Consensus 209 ~~~~~~~~~~~~~-~~~~~~~pe~~ 232 (302)
+.|++.++..++. ++..++.||++
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 163 ACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccC
Confidence 9998876655543 34455678763
No 41
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.84 E-value=8.1e-20 Score=165.81 Aligned_cols=185 Identities=15% Similarity=0.076 Sum_probs=137.6
Q ss_pred hhhhccchhhhhhh-hhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHH---Hhhcch
Q 022133 65 YHLGVVNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI---SATTRN 140 (302)
Q Consensus 65 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~---~~~~~~ 140 (302)
...+.+..++|.+. +.+|++.... ++..+...++..++.++.|+++||+|||+.++.+.++..++... ...+++
T Consensus 264 ~~~~~~~~~~p~~l~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (490)
T PRK10642 264 VTYYMLLTYMPSYLSHNLHYSEDHG--VLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNV 341 (490)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 33444555677665 4567765543 56777788889999999999999999999988877654433222 223445
Q ss_pred hHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhH-HHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHH
Q 022133 141 LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAF-IQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAA 219 (302)
Q Consensus 141 ~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~ 219 (302)
...+++++++.|++.+...+....++.|++|++.|++++++ ++.+ .+++.++|.+.+++.+..+.|+..+++..++++
T Consensus 342 ~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~-~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~ 420 (490)
T PRK10642 342 IGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNIS-VLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAV 420 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 67777888998888777777788889999999999999997 5554 455677888888777655447777766667777
Q ss_pred HHHHHhhccCCChHHHHHh-----CCHHHHHHHHHHHh
Q 022133 220 ILCLAMVFCAESPHWLYKK-----GRTAEAEAEFEKLL 252 (302)
Q Consensus 220 ~~~~~~~~~pe~~~~~~~~-----~~~~~~~~~~~~~~ 252 (302)
++++..+++||+|+++.++ ++.+|+.+.+++++
T Consensus 421 i~~~~~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 421 IGLITGVTMKETANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred HHHHHHHHhccccCCCCCCccccccchhhHHHHhhccc
Confidence 7777777889999987654 88888888888776
No 42
>PRK15075 citrate-proton symporter; Provisional
Probab=99.84 E-value=4.5e-19 Score=158.66 Aligned_cols=180 Identities=22% Similarity=0.304 Sum_probs=142.4
Q ss_pred HHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHH-----HHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q 022133 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMC-----LGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (302)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~g~l~d~~Grr~~~~~~~~ 126 (302)
......++.+...++...++.+.|.+.++++.+..+.. ++..+.. .++..+++++.|+++||+|||++++.+.+
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~ 94 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFA-SLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLS 94 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchH-HHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHH
Confidence 46677888999999999999999999999988766542 2222222 22335789999999999999999999999
Q ss_pred HHHHHHHHHhhcchhH--------HHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhh
Q 022133 127 PMIIGASISATTRNLI--------GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGI 198 (302)
Q Consensus 127 ~~~i~~~~~~~~~~~~--------~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~ 198 (302)
+.+++++++++++++. .++++|+++|++.+...+....+++|++|+++|++++++...+..+|..+++.+++
T Consensus 95 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~ 174 (434)
T PRK15075 95 IMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGY 174 (434)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998876 46889999999999998888999999999999999999988888787777777666
Q ss_pred ccc--------ccCcchHHHHHHhHHHHHHHHHHhhccCCChH
Q 022133 199 PVK--------EIAGWWRICFWVSIVPAAILCLAMVFCAESPH 233 (302)
Q Consensus 199 ~~~--------~~~g~w~~~~~~~~~~~~~~~~~~~~~pe~~~ 233 (302)
.+. +..| ||+.|++.++...+.++.....||++.
T Consensus 175 ~l~~~~~~~~~~~~g-Wr~~f~~~~~~~~~~~~~~~~~~e~~~ 216 (434)
T PRK15075 175 LLNQWLSPAQMAEWG-WRIPFLIGCLIVPFIFLIRRSLEETEE 216 (434)
T ss_pred HHHHhCCHHHHhccc-hHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 542 3456 999998865544333333444667654
No 43
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.84 E-value=2.6e-19 Score=158.06 Aligned_cols=153 Identities=14% Similarity=0.087 Sum_probs=135.9
Q ss_pred hccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 022133 68 GVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLG 147 (302)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 147 (302)
...++.+|.+.+++|++.++. +++.+.+.+++.+++++.|+++||+|||+++..+..+.+++.+++++++++..+++.
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~--g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~ 103 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVA--ALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSS 103 (393)
T ss_pred hccchhHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHH
Confidence 567889999999999987776 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHH
Q 022133 148 RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCL 223 (302)
Q Consensus 148 r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~ 223 (302)
|++.|++.+...+....++.+++| ++|+++++++..+..+|..+++.+++.+.+....||..+.+.++..++.++
T Consensus 104 r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~ 178 (393)
T PRK09705 104 ALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALF 178 (393)
T ss_pred HHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 999999999999888899999997 779999999999999999999999988877653399887665554444433
No 44
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.84 E-value=1.9e-19 Score=156.81 Aligned_cols=168 Identities=14% Similarity=0.072 Sum_probs=143.4
Q ss_pred HHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh
Q 022133 57 TLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (302)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~ 136 (302)
..+.++.........+.+|.+..+.+.+..+. +++.++..++.+++++++|+++||+|||++++.+.++.+++.++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~ 82 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAGTGSASVL--SLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLP 82 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH--HHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHH
Confidence 34455555666667777888888877665544 8999999999999999999999999999999999998888887777
Q ss_pred hcc-----hhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHH
Q 022133 137 TTR-----NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICF 211 (302)
Q Consensus 137 ~~~-----~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~ 211 (302)
+.. +++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|.+++|.+++.+.+..+ |++.|
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-~~~~~ 161 (365)
T TIGR00900 83 FVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLG-IKWAI 161 (365)
T ss_pred HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHH
Confidence 666 899999999999999999999999999999999999999999999999999999999999988777 99999
Q ss_pred HHhHHHHHHHHHHhhc
Q 022133 212 WVSIVPAAILCLAMVF 227 (302)
Q Consensus 212 ~~~~~~~~~~~~~~~~ 227 (302)
++.++..++..+..++
T Consensus 162 ~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 162 WVDAVGFAISALLIVS 177 (365)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8877666655544443
No 45
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.83 E-value=1e-19 Score=159.14 Aligned_cols=161 Identities=16% Similarity=0.125 Sum_probs=136.9
Q ss_pred hhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 022133 67 LGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLL 146 (302)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 146 (302)
.+...+..|.+.+++|++.++. +++.+++.++..++++++|+++||+|||+++..+.++.+++.++++++++++.+++
T Consensus 19 ~~~~~~~~~~~~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (377)
T TIGR00890 19 VYTWTLLAPPLGRYFGVGVTAV--AIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYL 96 (377)
T ss_pred HhhhhhHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456778999999999877665 89999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHH-h
Q 022133 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA-M 225 (302)
Q Consensus 147 ~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~-~ 225 (302)
+|++.|++.+..++.....+.+++| ++|+++.++...+..+|.++++.+.+.+.+..+ ||+.|++.++..++..+. +
T Consensus 97 ~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~ 174 (377)
T TIGR00890 97 TYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEG-VPAAFIYMGIIFLLVIVLGA 174 (377)
T ss_pred HHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888888888899997 569999999999999998776666666666666 999999877766665444 4
Q ss_pred hccCCC
Q 022133 226 VFCAES 231 (302)
Q Consensus 226 ~~~pe~ 231 (302)
++++++
T Consensus 175 ~~~~~~ 180 (377)
T TIGR00890 175 FLIGYP 180 (377)
T ss_pred HheecC
Confidence 445544
No 46
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.83 E-value=5.2e-19 Score=159.00 Aligned_cols=174 Identities=13% Similarity=0.112 Sum_probs=135.6
Q ss_pred HHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 022133 56 ATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS 135 (302)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~ 135 (302)
..+...........+...+|.+.++ |++..+. +++.+.+.++.+++++++|+++||+|||++++++.++.+++.+.+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~--g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~ 110 (452)
T PRK11273 34 IFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDL--GFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFM 110 (452)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHH--HHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHH
Confidence 3334444444444455677777776 8876665 899999999999999999999999999999999999999888877
Q ss_pred hhc----chhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHH-HHHHHHhhcccccCcchHHH
Q 022133 136 ATT----RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGL-MGSLLIGIPVKEIAGWWRIC 210 (302)
Q Consensus 136 ~~~----~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~g~w~~~ 210 (302)
++. .++..+++.|++.|++.+...+.....+.|++|+++|++++++++.+..+|. +.+|+++..+....+ ||+.
T Consensus 111 ~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~g-w~~~ 189 (452)
T PRK11273 111 GFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFND-WHAA 189 (452)
T ss_pred HhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcc-HHHH
Confidence 765 3677888999999999998888778889999999999999999999988886 456655433333335 9999
Q ss_pred HHHhHHHHHH-HHHHhhccCCChH
Q 022133 211 FWVSIVPAAI-LCLAMVFCAESPH 233 (302)
Q Consensus 211 ~~~~~~~~~~-~~~~~~~~pe~~~ 233 (302)
|++.+++.++ .++..+++||+|+
T Consensus 190 f~i~~~~~~~~~~l~~~~~~~~~~ 213 (452)
T PRK11273 190 LYMPAFAAILVALFAFAMMRDTPQ 213 (452)
T ss_pred HHHHHHHHHHHHHHHHHHccCCHh
Confidence 9887665555 4555667888764
No 47
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.83 E-value=5.3e-19 Score=159.63 Aligned_cols=159 Identities=25% Similarity=0.330 Sum_probs=130.5
Q ss_pred HhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHH
Q 022133 64 GYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIG 143 (302)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~ 143 (302)
++........++.+..++|-+++. .|+.++..++.+++.++.|.++|.||||..++.+.++..+++++++.++|...
T Consensus 57 ~~~~~~~a~~l~~I~~diG~~~~~---~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~ 133 (599)
T PF06609_consen 57 YFVLVLPASILPYINADIGGSDNW---SWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNT 133 (599)
T ss_pred HHHHhccHHHHHHHHHhcCCCccc---hHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHH
Confidence 334444566778888998876544 48999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHH
Q 022133 144 MLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCL 223 (302)
Q Consensus 144 ~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~ 223 (302)
++++..+.|++.|... +....++|+.|.+.|+.+.++......+....++.++..+....+ |||.|++.++...++++
T Consensus 134 ~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~-WRw~~~~~~i~~~i~~v 211 (599)
T PF06609_consen 134 FIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSG-WRWIFYIFIIWSGIALV 211 (599)
T ss_pred HHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCC-cchHHHHHHHHHHHHHH
Confidence 9999999999987776 456678999999999988877766665556677778776665555 99999998777666555
Q ss_pred Hhhc
Q 022133 224 AMVF 227 (302)
Q Consensus 224 ~~~~ 227 (302)
..++
T Consensus 212 l~~~ 215 (599)
T PF06609_consen 212 LIFF 215 (599)
T ss_pred HHHH
Confidence 4433
No 48
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.82 E-value=4.2e-19 Score=155.16 Aligned_cols=174 Identities=18% Similarity=0.166 Sum_probs=137.1
Q ss_pred HHHHHHHHHHhhhhccchhhhh-hhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH
Q 022133 55 VATLSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS 133 (302)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~ 133 (302)
...++.+..........++.|. +.+++|++..+. +++.+++.++.+++++++|+++||+|||+.++++.++.+++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~ 82 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQL--GNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCL 82 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHh--hHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 3455555555566667888885 888899887766 8999999999999999999999999999999999999999999
Q ss_pred HHhhcc-hhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccc----------
Q 022133 134 ISATTR-NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE---------- 202 (302)
Q Consensus 134 ~~~~~~-~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~---------- 202 (302)
++++.+ +++.+++.|++.|++.+. .+....+++|++|+++|+++.+++..+..+|..+++.+++.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~ 161 (366)
T TIGR00886 83 WAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPA 161 (366)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 999888 999999999999998654 45677899999999999999999887777777777666655443
Q ss_pred cCcchHHHHHH-hH-HHHHHHHHHhhccCCCh
Q 022133 203 IAGWWRICFWV-SI-VPAAILCLAMVFCAESP 232 (302)
Q Consensus 203 ~~g~w~~~~~~-~~-~~~~~~~~~~~~~pe~~ 232 (302)
..+ ||+.+++ .+ +..+..++...+.+|+|
T Consensus 162 ~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (366)
T TIGR00886 162 HLA-WGWAFVIVPAGILLLPALLIFFVGADTP 192 (366)
T ss_pred ccc-ccchhHHHHHHHHHHHHHHHHHhcccCC
Confidence 124 8998843 23 33333444455566654
No 49
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.82 E-value=3.6e-19 Score=155.16 Aligned_cols=165 Identities=15% Similarity=0.085 Sum_probs=143.8
Q ss_pred hhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 022133 67 LGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLL 146 (302)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 146 (302)
....+...|.+.+++|++.++. .|.+.++++.+++++++++|+++||+|.|+++.++.+.+++..++++++.++..+.+
T Consensus 42 R~n~s~a~p~L~~elglT~~qv-~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i 120 (511)
T TIGR00806 42 RPGESFITPYLLTVLNFTEETV-TNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQL 120 (511)
T ss_pred hchHHHHHHHHHHHcCCCHHHh-cchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456667888889999998872 389999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHH---HhHHHHHHHHH
Q 022133 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFW---VSIVPAAILCL 223 (302)
Q Consensus 147 ~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~---~~~~~~~~~~~ 223 (302)
.|++.|++.|..+ ....++..|+|+++|+++.++.+.+..+|.++++++++. ....| ||.... +......++++
T Consensus 121 ~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~g-Wr~y~~Ln~Isl~s~~~a~~ 197 (511)
T TIGR00806 121 MEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLG-WISYSTLNIISLVFMTFSVF 197 (511)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcC-chhHHHHHHHHHHHHHHHHH
Confidence 9999999999999 999999999999999999999999999999999999998 44556 776554 44555555677
Q ss_pred HhhccCCChHHH
Q 022133 224 AMVFCAESPHWL 235 (302)
Q Consensus 224 ~~~~~pe~~~~~ 235 (302)
..+++|..++.+
T Consensus 198 ~a~~LP~~~~sl 209 (511)
T TIGR00806 198 LALFLKRPKRSL 209 (511)
T ss_pred HHHhCCCCchhh
Confidence 778888665544
No 50
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.82 E-value=7.1e-19 Score=155.32 Aligned_cols=173 Identities=20% Similarity=0.237 Sum_probs=146.2
Q ss_pred HHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 022133 56 ATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS 135 (302)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~ 135 (302)
.....+..........+.+|.+.+++|.+.++. ++..+.+.++..+++++.|+++||+|||+.++.+.++.+++.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~ 85 (392)
T PRK10473 8 SFALVLLYPAGIDMYLVGLPRIAADLNASEAQL--HIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLC 85 (392)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 334444444455556678999999998876655 899999999999999999999999999999999999999999998
Q ss_pred hhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhH
Q 022133 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSI 215 (302)
Q Consensus 136 ~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~ 215 (302)
..+++...+++.|++.|++.+...+....++.|++|+++|+++.++.+....+|..++|.+++.+.+..+ |++.+++.+
T Consensus 86 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g-~~~~~~~~~ 164 (392)
T PRK10473 86 SLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFP-WQSLFYTMA 164 (392)
T ss_pred HHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC-hHHHHHHHH
Confidence 8889999999999999999998888899999999999999999999999999999999999988877777 999988876
Q ss_pred HHHHHHH-HHhhccCCC
Q 022133 216 VPAAILC-LAMVFCAES 231 (302)
Q Consensus 216 ~~~~~~~-~~~~~~pe~ 231 (302)
+..++.. +..+++||+
T Consensus 165 ~~~~i~~~~~~~~~~~~ 181 (392)
T PRK10473 165 AMGILVLLLSLFILKET 181 (392)
T ss_pred HHHHHHHHHHHHHcCCC
Confidence 6655543 344567776
No 51
>PRK10504 putative transporter; Provisional
Probab=99.82 E-value=4.1e-19 Score=160.56 Aligned_cols=177 Identities=22% Similarity=0.314 Sum_probs=153.3
Q ss_pred HHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Q 022133 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (302)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~ 131 (302)
..+.+.++.++..++...+++.+|.+.+++|.+..+. +++.+.+.++.+++.+++|+++||+|||++++.+.++.+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHM--HMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 3556667777778888888889999999999876655 78899999999999999999999999999999999988888
Q ss_pred HHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHH
Q 022133 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICF 211 (302)
Q Consensus 132 ~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~ 211 (302)
.+++.++++++.+++.|+++|++.+...+....++.|++|+++|+++.++......+|..++|.+++.+.+..+ ||+.|
T Consensus 89 ~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~g-w~~~f 167 (471)
T PRK10504 89 SLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYAS-WHWIF 167 (471)
T ss_pred HHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcc-HHHHH
Confidence 88888889999999999999999999999999999999999999999999999999999999999999988887 99999
Q ss_pred HHhHHHHHHHHHHh-hccCCC
Q 022133 212 WVSIVPAAILCLAM-VFCAES 231 (302)
Q Consensus 212 ~~~~~~~~~~~~~~-~~~pe~ 231 (302)
++......+..+.. ...|+.
T Consensus 168 ~~~~~~~~l~~~~~~~~~~~~ 188 (471)
T PRK10504 168 LINIPVGIIGAIATLMLMPNY 188 (471)
T ss_pred HHHHHHHHHHHHHHHHhCCCc
Confidence 98766655544433 444544
No 52
>PRK11043 putative transporter; Provisional
Probab=99.82 E-value=8.3e-19 Score=155.34 Aligned_cols=169 Identities=20% Similarity=0.172 Sum_probs=144.5
Q ss_pred HHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcc
Q 022133 60 SFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR 139 (302)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~ 139 (302)
.....+....+.+..|.+.+++|.+.++. ++..+++.++..++++++|+++||+|||+.++.+.++.+++.+++.+.+
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 92 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAV--SASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE 92 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHH--HHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 33444555666777888889999876655 8999999999999999999999999999999999999999998888899
Q ss_pred hhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHH
Q 022133 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAA 219 (302)
Q Consensus 140 ~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~ 219 (302)
+++.+++.|++.|++.+...+....++.|++|+++++...+.......+|..++|.+++.+.+..+ ||+.|++.++..+
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~~~~~~~~~~~~ 171 (401)
T PRK11043 93 SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFG-WQAIFATLFAITL 171 (401)
T ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHHHH
Confidence 999999999999999888877778899999999999999998888888999999999999888877 9999988777766
Q ss_pred HHHHHhhccCCC
Q 022133 220 ILCLAMVFCAES 231 (302)
Q Consensus 220 ~~~~~~~~~pe~ 231 (302)
+..+..++++|+
T Consensus 172 ~~~~~~~~~~~~ 183 (401)
T PRK11043 172 LLILPTLRLKPS 183 (401)
T ss_pred HHHHHHHHcCCC
Confidence 665555555554
No 53
>PRK03699 putative transporter; Provisional
Probab=99.82 E-value=1e-18 Score=154.46 Aligned_cols=174 Identities=15% Similarity=0.152 Sum_probs=149.2
Q ss_pred HHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH
Q 022133 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (302)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~ 129 (302)
++..+.+.+..+..+......+..+|.+.+++|++.++. +++.+.+.++..+++++.|+++||+|||++++.+.++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~--g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 6 IKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSM--SNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 345566677777777877888889999999999887665 899999999999999999999999999999999999999
Q ss_pred HHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccc-cCcchH
Q 022133 130 IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE-IAGWWR 208 (302)
Q Consensus 130 i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~g~w~ 208 (302)
++.++++++++++.++++|++.|++.+...+....++.|++|+++|+.+++..+....+|..++|.+.+.+.. ..+ ||
T Consensus 84 i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~g-w~ 162 (394)
T PRK03699 84 LAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIE-WY 162 (394)
T ss_pred HHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-HH
Confidence 9999999999999999999999999998888888999999999999999999888888998899988877654 445 99
Q ss_pred HHHHHhHHHHHHHHHHhh
Q 022133 209 ICFWVSIVPAAILCLAMV 226 (302)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~ 226 (302)
+.|++.++..++..+..+
T Consensus 163 ~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 163 WVYACIGLVYVAIFILTL 180 (394)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999887666655444433
No 54
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.81 E-value=3.5e-19 Score=158.28 Aligned_cols=197 Identities=19% Similarity=0.303 Sum_probs=153.7
Q ss_pred hcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcc--hhHHHHHHHHHHhhhhcc
Q 022133 80 DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR--NLIGMLLGRFVVGTGMGL 157 (302)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~r~~~g~~~~~ 157 (302)
+++++.++ .+++.+.++.|+++++++.|+++||+|-|+++..+.++.+++++++.++. ++..+++.|+++|++.|.
T Consensus 67 ~~~ws~~~--k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 67 EYDWSSTE--KGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred eecCCHHH--HHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 34555444 48999999999999999999999999999999999999999999988764 445778999999999999
Q ss_pred hhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhccccc-CcchHHHHHHhHHHHHHHHHHhhc-cCCChHHH
Q 022133 158 GPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI-AGWWRICFWVSIVPAAILCLAMVF-CAESPHWL 235 (302)
Q Consensus 158 ~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~g~w~~~~~~~~~~~~~~~~~~~~-~pe~~~~~ 235 (302)
.+|....+.+.|+|+++|++..++...+..+|.+++..+++.+.+. .| |+..|++.++.+++..+++++ ..|+|...
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~G-W~sifY~~g~~g~i~~~~w~~~~~d~P~~h 223 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLG-WPSIFYVFGIVGLIWFILWFLFYSDSPSKH 223 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCC-CchHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence 9999999999999999999999999999999999999999999988 66 999999998888887776654 45555310
Q ss_pred HHhCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCCcccHHHhhcCCchhHHHHHH
Q 022133 236 YKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRGRYHAL 294 (302)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (302)
+.-+++ +.+++..+ +.++..++..+.+|+++++++..+..+++.
T Consensus 224 --~~is~~---El~~I~~~----------k~~~~~~~~~~vP~~~i~ts~~vwai~~~~ 267 (466)
T KOG2532|consen 224 --PNISEK---ELKYIEKG----------KSEAHVKKKPPVPYKAILTSPPVWAIWISA 267 (466)
T ss_pred --CCCCHH---HHHHHHhc----------ccccccCCCCCCCHHHHHcCHHHHHHHHHH
Confidence 111111 12221111 111111122577899999998877665544
No 55
>PRK12382 putative transporter; Provisional
Probab=99.81 E-value=1.8e-18 Score=152.81 Aligned_cols=175 Identities=16% Similarity=0.178 Sum_probs=137.7
Q ss_pred HHHHHHHHHHHhhhhccchhhhh-hhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Q 022133 54 LVATLSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (302)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~ 132 (302)
..+.++.++.....+...+.+|. +.+++|.+..+. |++.+++.++..++++++|+++||+|||++++.+.+..+++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~--g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~ 95 (392)
T PRK12382 18 FRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMV--GIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAG 95 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHH--HHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHH
Confidence 34444555555566667777776 467888876665 999999999999999999999999999999999888776654
Q ss_pred HHHh---h-----cchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccC
Q 022133 133 SISA---T-----TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (302)
Q Consensus 133 ~~~~---~-----~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 204 (302)
+.+. . .+++..++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..++|.+++.+.+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~ 175 (392)
T PRK12382 96 LAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHF 175 (392)
T ss_pred HHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4321 1 2477889999999999999888888889999999999999999999999999999999999888877
Q ss_pred cchHHHHHHhHHHHHHHHHHhhccCCC
Q 022133 205 GWWRICFWVSIVPAAILCLAMVFCAES 231 (302)
Q Consensus 205 g~w~~~~~~~~~~~~~~~~~~~~~pe~ 231 (302)
+ |+..+.+..+..++.++.....||.
T Consensus 176 g-~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (392)
T PRK12382 176 G-FAALALTTMVLPLLAWAFNGTVRKV 201 (392)
T ss_pred C-hHHHHHHHHHHHHHHHHHHHhccCC
Confidence 7 8987776555444443333334543
No 56
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.81 E-value=6.7e-19 Score=156.98 Aligned_cols=178 Identities=21% Similarity=0.231 Sum_probs=144.7
Q ss_pred HHHHHHHHHHHHhhhhc-cchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Q 022133 53 VLVATLSSFLFGYHLGV-VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~ 131 (302)
+..++...+........ ....+..+.+|.+...++. +.+.+++.++++++.++++.+.||++-.+.+....+++.+.
T Consensus 47 ~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l--~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~ 124 (495)
T KOG2533|consen 47 LPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQL--GVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLF 124 (495)
T ss_pred HHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhh--hhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHH
Confidence 33334444444444332 3333444557777776766 89999999999999999999999999888888888888877
Q ss_pred HHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhccc------ccCc
Q 022133 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK------EIAG 205 (302)
Q Consensus 132 ~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~------~~~g 205 (302)
.++....+|++.+++.|++.|+..+..+|....+++.|+.+++|+..++++.....+|.++|.+++..+. ...|
T Consensus 125 ~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~g 204 (495)
T KOG2533|consen 125 GFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAG 204 (495)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCC
Confidence 7777778999999999999999999999999999999999999999999999999999999999988863 3345
Q ss_pred chHHHHHHhHHHHHH-HHHHhhccCCChH
Q 022133 206 WWRICFWVSIVPAAI-LCLAMVFCAESPH 233 (302)
Q Consensus 206 ~w~~~~~~~~~~~~~-~~~~~~~~pe~~~ 233 (302)
||+.|++.+++.+. ++++++++|+.|.
T Consensus 205 -W~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 205 -WRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred -ceeehhHHHHHHHHHHheEEEEecCChh
Confidence 99999997766665 5566778999875
No 57
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.81 E-value=7.7e-19 Score=154.20 Aligned_cols=162 Identities=20% Similarity=0.312 Sum_probs=143.3
Q ss_pred hhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 022133 67 LGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLL 146 (302)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 146 (302)
.....+.+|.+.+++|.+.++. +++.+++.++..++.+++|+++||+|||+.+..+.++.+++.+.+.+.++++.+++
T Consensus 7 ~~~~~p~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 84 (377)
T PRK11102 7 IDMYLPALPVIAADFGVSAGSV--QMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIY 84 (377)
T ss_pred HHHHhccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 3456688889999999877665 89999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHH-HHh
Q 022133 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILC-LAM 225 (302)
Q Consensus 147 ~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~-~~~ 225 (302)
.|++.|++.+...+....++.|++|+++|++++++......+|..++|.+++.+.+..+ |++.|++.++..++.. +..
T Consensus 85 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 85 MRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFS-WHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988999999999999999999999999999999999999999888777 9999988766665544 444
Q ss_pred hccCCC
Q 022133 226 VFCAES 231 (302)
Q Consensus 226 ~~~pe~ 231 (302)
+++||+
T Consensus 164 ~~~~~~ 169 (377)
T PRK11102 164 FFIPET 169 (377)
T ss_pred HhCCcc
Confidence 567775
No 58
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.80 E-value=8.7e-18 Score=147.85 Aligned_cols=151 Identities=21% Similarity=0.220 Sum_probs=136.3
Q ss_pred HHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Q 022133 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (302)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~ 131 (302)
.+..+.++.++........++.+|.+.+++|.+..+. |++.+.+.++..+++++.|+++||+|||+++..+.++.+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~--G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~ 84 (381)
T PRK03633 7 PVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQV--GVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAG 84 (381)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556667777888888889999999999999876555 99999999999999999999999999999999999999999
Q ss_pred HHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccC
Q 022133 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (302)
Q Consensus 132 ~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 204 (302)
.++++++++++.++++|++.|++.+...+.....+.+..|+++|+++++.+..+..+|..++|.+++.+.+..
T Consensus 85 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 157 (381)
T PRK03633 85 CAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTEL 157 (381)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 9999999999999999999999999888888788888999999999999999999999999999999887653
No 59
>PRK10133 L-fucose transporter; Provisional
Probab=99.80 E-value=2.4e-18 Score=153.86 Aligned_cols=151 Identities=18% Similarity=0.196 Sum_probs=132.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH
Q 022133 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (302)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~ 127 (302)
.....+....+..++.++......+..|.+.+++|.+..+. ++..+.+.+++.+++++.|+++||+|||+++..+..+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~--gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~ 100 (438)
T PRK10133 23 SYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQA--GLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFL 100 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 34445566667777778888888999999999999877665 8999999999999999999999999999999999999
Q ss_pred HHHHHHHH---hhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcc
Q 022133 128 MIIGASIS---ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (302)
Q Consensus 128 ~~i~~~~~---~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~ 200 (302)
.+++++++ ..++++..++++|+++|++.+...+....++.|+.|.++|...+++.+....+|..+++.+++.+
T Consensus 101 ~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 101 YALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998775 46789999999999999999999999999999988777777789999999999999999887654
No 60
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.80 E-value=2.6e-18 Score=152.30 Aligned_cols=171 Identities=16% Similarity=0.167 Sum_probs=145.4
Q ss_pred HHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Q 022133 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~ 132 (302)
+.+++...+..++..+...+..|.+++++|++..+. |++.+.+.+++.+++++.|++.||+|||+.++.+.++.+++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~--g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQA--ALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 455667777778888888899999999999877665 899999999999999999999999999999999999999988
Q ss_pred HHHhh---cchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccC-----
Q 022133 133 SISAT---TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA----- 204 (302)
Q Consensus 133 ~~~~~---~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----- 204 (302)
+++.. .++++.+++.|++.|++.|...+....++.++.|+++|++.+++.+....+|..++|.+++.+....
T Consensus 83 ~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~ 162 (410)
T TIGR00885 83 FLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQS 162 (410)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccch
Confidence 87543 4688999999999999999999999999999999999999999999999999999999988764221
Q ss_pred --------------------cchHHHHHHhHHHHHHHHHHh
Q 022133 205 --------------------GWWRICFWVSIVPAAILCLAM 225 (302)
Q Consensus 205 --------------------g~w~~~~~~~~~~~~~~~~~~ 225 (302)
..||++|++.++..++..+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 163 QDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred hhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 128999987766555544443
No 61
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.80 E-value=2.1e-19 Score=150.07 Aligned_cols=146 Identities=23% Similarity=0.267 Sum_probs=120.7
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHH
Q 022133 86 NTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALY 165 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~ 165 (302)
.....|.+.+.+.+..++.++.+|.++||+|||++++++.+..++..++.+.+.|+..+++.|++.|+..|.. .+..++
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl-~v~rAi 144 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL-SVIRAI 144 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch-HHHHHH
Confidence 3344589999999999999999999999999999999999999999999999999977777799999999877 477899
Q ss_pred hhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccc---cCcchHHH--HHHhHHHHHH-HHHHhhccCCCh
Q 022133 166 VTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE---IAGWWRIC--FWVSIVPAAI-LCLAMVFCAESP 232 (302)
Q Consensus 166 ~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~g~w~~~--~~~~~~~~~~-~~~~~~~~pe~~ 232 (302)
++|++++++|+.+++..+++.++|.++||.+|+++.+ ..|.+... -++..+.+.. ..+..+++|||-
T Consensus 145 isdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL 217 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETL 217 (451)
T ss_pred HHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 9999999999999999999999999999999999987 33321111 1222233333 345567899983
No 62
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.80 E-value=2e-18 Score=155.29 Aligned_cols=175 Identities=14% Similarity=0.100 Sum_probs=140.5
Q ss_pred HHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH
Q 022133 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (302)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~ 129 (302)
|..+..+.+...........++.+.+.+.+++|.+.++. +++.+.+.++..++.+++|+++||+|||++++.+.++.+
T Consensus 18 w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~--~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~ 95 (455)
T TIGR00892 18 WVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSET--AWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLAS 95 (455)
T ss_pred hHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHH--HHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHH
Confidence 433333333333322333446778889999999987776 789999999999999999999999999999999999999
Q ss_pred HHHHHHhhcchhHHHHH-HHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchH
Q 022133 130 IGASISATTRNLIGMLL-GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (302)
Q Consensus 130 i~~~~~~~~~~~~~~~~-~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~ 208 (302)
+++++++++++++.+++ .|++.|++.+...+....++.+++| ++|+++.++.+.+..+|..++|.+++.+.+..| ||
T Consensus 96 ~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g-wr 173 (455)
T TIGR00892 96 LGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG-WR 173 (455)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC-hH
Confidence 99999888888887765 4689999998776677788889996 789999999999999999999999998888777 99
Q ss_pred HHHHHhHHHHHHHHHHhhcc
Q 022133 209 ICFWVSIVPAAILCLAMVFC 228 (302)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~ 228 (302)
+.|++.+++.+++.+..+++
T Consensus 174 ~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 174 GSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99998877766555444443
No 63
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.80 E-value=1.6e-19 Score=167.48 Aligned_cols=173 Identities=16% Similarity=0.192 Sum_probs=146.0
Q ss_pred HHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh
Q 022133 57 TLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (302)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~ 136 (302)
.+..+......+.++..++.+.++++++..+. |++.+.+.++++++.++.++++||+|||+.+.++.+++++++++++
T Consensus 39 ~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~--G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~a 116 (633)
T TIGR00805 39 TCAQLQGLLYNGLVNSSLTTIERRFKLSTSSS--GLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLS 116 (633)
T ss_pred HHHHHHHHHHHHHHHhhchhhhhhhCCCCCcc--eeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHh
Confidence 34555555666778888999999999987776 8999999999999999999999999999999999999999999887
Q ss_pred hcc---------------------------------------------------hhHHHHHHHHHHhhhhcchhhhHHHH
Q 022133 137 TTR---------------------------------------------------NLIGMLLGRFVVGTGMGLGPTVAALY 165 (302)
Q Consensus 137 ~~~---------------------------------------------------~~~~~~~~r~~~g~~~~~~~~~~~~~ 165 (302)
+.+ .+..++++|+++|+|.+..++...++
T Consensus 117 lphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~ 196 (633)
T TIGR00805 117 LPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISY 196 (633)
T ss_pred ChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchh
Confidence 642 24567789999999999999999999
Q ss_pred hhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccC---------------------cchHHHHHHhHHHHHHHHHH
Q 022133 166 VTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA---------------------GWWRICFWVSIVPAAILCLA 224 (302)
Q Consensus 166 ~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---------------------g~w~~~~~~~~~~~~~~~~~ 224 (302)
+.|++|+++|+..++++..+..+|..+|+++++.+.+.. |.|+..|++.++++++..+.
T Consensus 197 i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~ 276 (633)
T TIGR00805 197 IDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIP 276 (633)
T ss_pred hhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998876432 12677787777776666566
Q ss_pred hhccCCC
Q 022133 225 MVFCAES 231 (302)
Q Consensus 225 ~~~~pe~ 231 (302)
++++|++
T Consensus 277 l~~~p~~ 283 (633)
T TIGR00805 277 FFFFPKA 283 (633)
T ss_pred HHhCccc
Confidence 6667765
No 64
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.80 E-value=1.8e-18 Score=155.02 Aligned_cols=177 Identities=14% Similarity=0.095 Sum_probs=138.8
Q ss_pred HHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Q 022133 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~ 132 (302)
+....+................|.+.+ .|.+.++. +++.+++.++..+++++.|+++||+|||+.++.+.++.+++.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~--g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~ 105 (438)
T TIGR00712 29 FLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGEL--GFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVM 105 (438)
T ss_pred HHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHh--HHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHH
Confidence 333444444444444445556666665 58776665 899999999999999999999999999999999998888888
Q ss_pred HHHhhc----chhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccc-cCcch
Q 022133 133 SISATT----RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE-IAGWW 207 (302)
Q Consensus 133 ~~~~~~----~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~g~w 207 (302)
++++.. .++..+.+.|++.|++.+..++.....+.|++|+++|++++++++.+..+|..+++.+.+.... ..+ |
T Consensus 106 ~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~-w 184 (438)
T TIGR00712 106 LLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFND-W 184 (438)
T ss_pred HHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhh-h
Confidence 776654 4566778889999999998888888999999999999999999999999999888877665443 345 9
Q ss_pred HHHHHHhHHHHHHH-HHHhhccCCChH
Q 022133 208 RICFWVSIVPAAIL-CLAMVFCAESPH 233 (302)
Q Consensus 208 ~~~~~~~~~~~~~~-~~~~~~~pe~~~ 233 (302)
|..|++.++..++. ++.++++||+|+
T Consensus 185 ~~~f~~~~~~~~i~~~~~~~~~~~~~~ 211 (438)
T TIGR00712 185 HAALYFPAICAIIVALFAFAMMRDTPQ 211 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 99999877766654 455566788764
No 65
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.80 E-value=1.3e-18 Score=154.01 Aligned_cols=175 Identities=19% Similarity=0.211 Sum_probs=142.3
Q ss_pred HHHHHHHHHHHHhhhhccchhhhh-hhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Q 022133 53 VLVATLSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~ 131 (302)
+....+..++......+..+.+|. +.+++|.+..+. |++.+++.++.++++++.|+++||+|||++++.+.++.+++
T Consensus 17 ~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~--g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (399)
T PRK05122 17 IVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLA--GLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALS 94 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHH--HHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHH
Confidence 445666666667777778888886 457788876655 89999999999999999999999999999999999888776
Q ss_pred HHHHhhc---c-----hhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhccccc
Q 022133 132 ASISATT---R-----NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI 203 (302)
Q Consensus 132 ~~~~~~~---~-----~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 203 (302)
.+.+.++ + ++..+++.|++.|++.+...+....++.|++|+++|++++++...+..+|..+++.+++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 174 (399)
T PRK05122 95 GLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHW 174 (399)
T ss_pred HHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHc
Confidence 6554432 2 4667889999999999999888889999999999999999999999999999999999998888
Q ss_pred CcchHHHHHHhHHHHHHHHHHhhccCC
Q 022133 204 AGWWRICFWVSIVPAAILCLAMVFCAE 230 (302)
Q Consensus 204 ~g~w~~~~~~~~~~~~~~~~~~~~~pe 230 (302)
.+ |+..+++..+..++..+.....|+
T Consensus 175 ~g-~~~~~~~~~~~~~~~~~~~~~~~~ 200 (399)
T PRK05122 175 GG-LAGLGLLIMLLALLGLLLARPRPA 200 (399)
T ss_pred cc-HHHHHHHHHHHHHHHHHHHhcCCC
Confidence 88 898887766655544444433444
No 66
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.80 E-value=4.5e-18 Score=150.21 Aligned_cols=170 Identities=12% Similarity=0.066 Sum_probs=137.4
Q ss_pred HHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 022133 56 ATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS 135 (302)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~ 135 (302)
..++.++..+.........+.+..+++.+.... +++.+++.++++++.+++|+++||+|||++++++.++.+++++.+
T Consensus 8 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~ 85 (393)
T PRK11195 8 IMAAQFFSALADNALLFAAIALLKELHYPDWSQ--PLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLM 85 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH--HHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHH
Confidence 445555555544444455555677777665544 899999999999999999999999999999999999988888776
Q ss_pred hhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhH
Q 022133 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSI 215 (302)
Q Consensus 136 ~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~ 215 (302)
.+..+. ++.|+++|++.+...|...+++.|++|+++|+++.++.+....+|..+||.+++.+.+.. |+..+.+.+
T Consensus 86 ~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~--~~~~~~i~~ 160 (393)
T PRK11195 86 LFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH--AEAALAVCA 160 (393)
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
Confidence 665553 678999999999999999999999999999999999999999999999999999988743 666666655
Q ss_pred HHHHHHHHHhhccCCCh
Q 022133 216 VPAAILCLAMVFCAESP 232 (302)
Q Consensus 216 ~~~~~~~~~~~~~pe~~ 232 (302)
...++.++..+++||+|
T Consensus 161 ~~~~~~~~~~~~l~~~~ 177 (393)
T PRK11195 161 LIYLLAALFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHhcCCCCc
Confidence 55555555566788764
No 67
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.80 E-value=4e-18 Score=150.77 Aligned_cols=179 Identities=12% Similarity=0.021 Sum_probs=137.1
Q ss_pred HHHHHHHHHHHHHHHhhhhccchhhhhhhh-hcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHH
Q 022133 50 FPHVLVATLSSFLFGYHLGVVNEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (302)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~ 128 (302)
++.+.+..++.++........++..+.+.+ ++|++.++. +++.+++.+++.+++++.|++.||+|.|+++.++.++.
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~--g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~ 110 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQL--FLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAIL 110 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 345556666666666667777777777766 788887766 89999999999999999999999999999999999999
Q ss_pred HHHHHHHhhc-----chhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhccc--
Q 022133 129 IIGASISATT-----RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK-- 201 (302)
Q Consensus 129 ~i~~~~~~~~-----~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~-- 201 (302)
++.++.++++ +++..+++.|++.|++ +..++.....+++++|+++||+++|+......+|..+++++.+.+.
T Consensus 111 ~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~ 189 (462)
T PRK15034 111 IIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFV 189 (462)
T ss_pred HHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 9999888876 7999999999999997 6788889999999999999999999986666666655544443322
Q ss_pred ---cc------------CcchHHHHHHhHHHHHHHHHH-hhccCCC
Q 022133 202 ---EI------------AGWWRICFWVSIVPAAILCLA-MVFCAES 231 (302)
Q Consensus 202 ---~~------------~g~w~~~~~~~~~~~~~~~~~-~~~~pe~ 231 (302)
.. .-+|+..+++..+..++..+. ++++++.
T Consensus 190 ~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~ 235 (462)
T PRK15034 190 PVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDI 235 (462)
T ss_pred HHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 11 112677776666655554444 4445543
No 68
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.79 E-value=1.2e-17 Score=148.15 Aligned_cols=176 Identities=24% Similarity=0.212 Sum_probs=146.6
Q ss_pred HHHHHHHHHHHhhhhccchhhhhhhhhcccCCcch---hhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHH
Q 022133 54 LVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTL---AEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMII 130 (302)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i 130 (302)
....++.++.+...+...+++|.+.+++|.+..+. ..|++.++..++..++++++|+++||+|||+.++.+.++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 96 (408)
T PRK09874 17 TVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGI 96 (408)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHH
Confidence 34455666667777778889999999998876543 247888999999999999999999999999999999999999
Q ss_pred HHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHH
Q 022133 131 GASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRIC 210 (302)
Q Consensus 131 ~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~ 210 (302)
+.+++...++++.+++.|++.|++.+ ..+....++.+++|+++|+++.++...+..+|.+++|.+++.+.+..+ |++.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~ 174 (408)
T PRK09874 97 VMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYG-LRPV 174 (408)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHHH
Confidence 88888888999999999999999765 456777888999999999999999999999999999999999887777 9999
Q ss_pred HHHhHHHHHHHHH-HhhccCCC
Q 022133 211 FWVSIVPAAILCL-AMVFCAES 231 (302)
Q Consensus 211 ~~~~~~~~~~~~~-~~~~~pe~ 231 (302)
|++.++..++..+ ..+++||+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 175 FFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhccC
Confidence 9887766655444 34556665
No 69
>PRK10054 putative transporter; Provisional
Probab=99.78 E-value=6.3e-18 Score=149.36 Aligned_cols=173 Identities=14% Similarity=0.122 Sum_probs=142.2
Q ss_pred HHHHHHHHHHhhhhccchhhhhh-hhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH
Q 022133 55 VATLSSFLFGYHLGVVNEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS 133 (302)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~ 133 (302)
.+....++.....+...++++.+ .+++|++..+. |+..+++.++.++++++.|+++||+|||++++++.++.+++.+
T Consensus 11 ~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~--g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~ 88 (395)
T PRK10054 11 ALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLI--GYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFI 88 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHH
Confidence 44455555566666666766654 46688877665 8999999999999999999999999999999999999888888
Q ss_pred HHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHH
Q 022133 134 ISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (302)
Q Consensus 134 ~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~ 213 (302)
+.++.++++.+++++++.|.+.+...+....+..|.+|+++|+++.++......+|.+++|.+++.+.. .+ |+..|++
T Consensus 89 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g-~~~~f~~ 166 (395)
T PRK10054 89 AIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QS-INLPFWL 166 (395)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc-cCcHHHH
Confidence 888889998888889888888777778888999999999999999999999999999999999998875 45 8999988
Q ss_pred hHHHHHHHHHH-hhccCCC
Q 022133 214 SIVPAAILCLA-MVFCAES 231 (302)
Q Consensus 214 ~~~~~~~~~~~-~~~~pe~ 231 (302)
.++..++.++. .+++|++
T Consensus 167 ~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 167 AAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 77666665443 3445654
No 70
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.78 E-value=9.3e-18 Score=156.69 Aligned_cols=138 Identities=14% Similarity=0.023 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCC
Q 022133 92 LVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSP 171 (302)
Q Consensus 92 ~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p 171 (302)
+...+..++.+++.++.|+++||+|||++++++.++.++++++.++.++...+++++++.|++.++..+...++++|++|
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~P 678 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYP 678 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34556668889999999999999999999999999999999988888887778888888898888888899999999999
Q ss_pred CCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhhccCCC
Q 022133 172 PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (302)
Q Consensus 172 ~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~pe~ 231 (302)
++.|++++|+.+....+|.+++|.+++.+.+.. ...+|++.++..+++.++.+++|||
T Consensus 679 t~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~--~~~pf~i~a~~lll~~ll~~~LPET 736 (742)
T TIGR01299 679 SDKRATAFGFLNALCKAAAVLGILIFGSFVGIT--KAAPILFASAALACGGLLALKLPDT 736 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999998776543 4567777777777777777778998
No 71
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.78 E-value=1.5e-17 Score=146.67 Aligned_cols=233 Identities=15% Similarity=0.101 Sum_probs=157.1
Q ss_pred CcchhhhhhhhcccCCCCCCCCccchhh--hhhhhcCcccccc----CCCCcchhHHHHHHHHHHHHHHHhhhhccchhh
Q 022133 1 MWGRQREASMMYKRTSSRDRSSTFDVEE--TTALVQNGTEVEN----TNPSWKLSFPHVLVATLSSFLFGYHLGVVNEPL 74 (302)
Q Consensus 1 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (302)
+|||.+||++.++.+++.+++++...+. +.++.+.++++.. ...+...++...+.+.+.......+.+.+..|.
T Consensus 214 ~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Ys 293 (485)
T KOG0569|consen 214 KKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYS 293 (485)
T ss_pred HcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHH
Confidence 3899999999999999876544332221 1111111110111 011112222222333333333334455677888
Q ss_pred hhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc---ch-h---HH--HH
Q 022133 75 ESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT---RN-L---IG--ML 145 (302)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~---~~-~---~~--~~ 145 (302)
..+.++.|++.+++ -+.+....+...+.++++.++.||+|||+.++++..++.+..+++... .+ . .. .+
T Consensus 294 t~i~~~aG~~~~~a--~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i 371 (485)
T KOG0569|consen 294 TSIFKTAGFTPEEA--QYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCI 371 (485)
T ss_pred HHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 88999999988877 588888899999999999999999999999999999988888766542 11 1 11 12
Q ss_pred HHHHHHhhhhcch-hhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHH-HHHHH
Q 022133 146 LGRFVVGTGMGLG-PTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPA-AILCL 223 (302)
Q Consensus 146 ~~r~~~g~~~~~~-~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~-~~~~~ 223 (302)
++.++..++.+.. .|+.+-+.+|++|++.|..++++......+..++.......+.+..|. +.|++..+++ +..+.
T Consensus 372 ~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~--~~filF~i~~~~~~i~ 449 (485)
T KOG0569|consen 372 AAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP--YVFILFVIPLAIFLIY 449 (485)
T ss_pred HHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hhhHHHHHHHHHHHHH
Confidence 3333333333322 468888999999999999999999999999999999998888888874 5555544444 44566
Q ss_pred HhhccCCChHHHHHhCCHHH
Q 022133 224 AMVFCAESPHWLYKKGRTAE 243 (302)
Q Consensus 224 ~~~~~pe~~~~~~~~~~~~~ 243 (302)
++.++||| |+|+..
T Consensus 450 ~~~~lPET------kgr~~~ 463 (485)
T KOG0569|consen 450 LYRYLPET------KGRTPY 463 (485)
T ss_pred HHHhCccc------CCCCHH
Confidence 67789999 777654
No 72
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.77 E-value=6.4e-18 Score=146.25 Aligned_cols=171 Identities=32% Similarity=0.472 Sum_probs=150.5
Q ss_pred HHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 022133 56 ATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS 135 (302)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~ 135 (302)
+.+..+..........+..|.+.++.|.+..+. ++..+...++..+++++.|+++||+|||+.+..+.++..++.+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~ 81 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAEDLGLSASQA--GLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLL 81 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHH
Confidence 445566667777778888898999888766655 899999999999999999999999999999999999999999999
Q ss_pred hhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhH
Q 022133 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSI 215 (302)
Q Consensus 136 ~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~ 215 (302)
.+.++++.+++.|++.|++.+...+....++.|++|+++|++.+++.+....+|..++|.+++.+.+..+ |++.+++.+
T Consensus 82 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~ 160 (352)
T cd06174 82 AFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLG-WRWLFLILA 160 (352)
T ss_pred HHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHH
Confidence 8889999999999999999999999999999999999999999999999999999999999999988877 899998877
Q ss_pred HHHHHHHHHhhccC
Q 022133 216 VPAAILCLAMVFCA 229 (302)
Q Consensus 216 ~~~~~~~~~~~~~p 229 (302)
+..++..+...+++
T Consensus 161 ~~~~~~~~~~~~~~ 174 (352)
T cd06174 161 ILGLLLALLLLFLL 174 (352)
T ss_pred HHHHHHHHHHHHHH
Confidence 77666555444443
No 73
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.77 E-value=2.8e-17 Score=144.03 Aligned_cols=172 Identities=15% Similarity=0.123 Sum_probs=136.8
Q ss_pred HHHHHHHhhhhccchhhhhh-hhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH-HHHHHHHHHHHHH
Q 022133 58 LSSFLFGYHLGVVNEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQ-LCALPMIIGASIS 135 (302)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~-~~~~~~~i~~~~~ 135 (302)
+..++.+...+...+.+|.+ .+++|.+..+. |++.+++.++..+.+++.|.++||+|||+.++ .+.++.+++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMI--GLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHH
Confidence 34566666677777888865 56788876655 89999999999999999999999999888755 4556666677788
Q ss_pred hhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchh--HhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHH
Q 022133 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTY--GAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (302)
Q Consensus 136 ~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~ 213 (302)
+++++++.+++.|++.|.+.+...+....+..|+.|++.|+.+ .+....+..+|..++|.+++.+.+..+ ||+.|++
T Consensus 82 ~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~-~~~~f~~ 160 (375)
T TIGR00899 82 AWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFG-FTVMFLT 160 (375)
T ss_pred HhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcc-cHHHHHH
Confidence 8889999888999999888777778888888999888777754 577777888999999999999888777 9999998
Q ss_pred hHHHHHHHHHH-hhccCCCh
Q 022133 214 SIVPAAILCLA-MVFCAESP 232 (302)
Q Consensus 214 ~~~~~~~~~~~-~~~~pe~~ 232 (302)
.+++.++..+. ++++||.|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 161 AALAFVLCGVLVWLFLPSYP 180 (375)
T ss_pred HHHHHHHHHHHHHHhCCCcc
Confidence 87766655444 45578864
No 74
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.77 E-value=1.5e-17 Score=150.31 Aligned_cols=177 Identities=15% Similarity=0.167 Sum_probs=139.5
Q ss_pred HHHHHHHHHHHHHHHhhhhccchhhh-hhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhh-hhHHHHHHHHHHH
Q 022133 50 FPHVLVATLSSFLFGYHLGVVNEPLE-SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALP 127 (302)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~Grr~~~~~~~~~ 127 (302)
++.+..+.+..+...+..+....+++ ++.+++|++.++. +++.+.+.....+..+++|+++|| +|||++++++.++
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a--~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~ 90 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQA--FITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIV 90 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHH
Confidence 34455555555555555555555544 4456788876665 688888888888888999999999 9999999999999
Q ss_pred HHHHHHHHhhcchhHH-HHHHHHHHhhhhcchhhhHHHHhhhcCCCCc--cchhHhHHHHHHHHHHHHHHHHhhcccccC
Q 022133 128 MIIGASISATTRNLIG-MLLGRFVVGTGMGLGPTVAALYVTEVSPPFV--RGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (302)
Q Consensus 128 ~~i~~~~~~~~~~~~~-~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~--R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 204 (302)
.+++.+.++++.+... ++++|.++|++.|...+...++++|++|+++ |+.+.+++..+.++|.+++|.+++++.+..
T Consensus 91 ~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~ 170 (489)
T PRK10207 91 LAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKF 170 (489)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999888766443 5578999999999999999999999999874 577899999999999999999999999988
Q ss_pred cchHHHHHHhHHHHHHHHHHhhccC
Q 022133 205 GWWRICFWVSIVPAAILCLAMVFCA 229 (302)
Q Consensus 205 g~w~~~~~~~~~~~~~~~~~~~~~p 229 (302)
| ||+.|++..+..+.+++.+.+.+
T Consensus 171 g-w~~~F~i~~i~~~~~~~~~~~~~ 194 (489)
T PRK10207 171 G-YSVTYNLCGAGLIIALLVYFACR 194 (489)
T ss_pred C-hHHHHHHHHHHHHHHHHHHHHcc
Confidence 8 99999886554444444444433
No 75
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.77 E-value=2e-17 Score=146.42 Aligned_cols=170 Identities=16% Similarity=0.124 Sum_probs=141.2
Q ss_pred HHHHHHHhhhhccchhhhh-hhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh
Q 022133 58 LSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (302)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~ 136 (302)
...++.....+.+.++++. +.+++|++.... |++.+...++..+.+++.|+++||+|||++++.+.++.+++.+.+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~ 94 (400)
T PRK11646 17 IDNMLVVLGFFVVFPLISIRFVDQLGWAAVMV--GIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMA 94 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHH--HHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 4444444455555666664 457778766554 8999999999999999999999999999999999999999999998
Q ss_pred hcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHH
Q 022133 137 TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIV 216 (302)
Q Consensus 137 ~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~ 216 (302)
+.++++.+++.|++.|++.+...+...+++.|++|+++|++++++......+|..++|.+++.+. ..+ |++.|++.++
T Consensus 95 ~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g-~~~~f~~~~~ 172 (400)
T PRK11646 95 IAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYD-FRLVCATGAV 172 (400)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh-HHHHHHHHHH
Confidence 88999999999999999998888888899999999999999999999999999999999999988 556 9999998766
Q ss_pred HHHHHH-HHhhccCCC
Q 022133 217 PAAILC-LAMVFCAES 231 (302)
Q Consensus 217 ~~~~~~-~~~~~~pe~ 231 (302)
..++.. +..++.||.
T Consensus 173 ~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 173 LFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHhCCcc
Confidence 655543 334556653
No 76
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.77 E-value=4.3e-17 Score=143.45 Aligned_cols=170 Identities=25% Similarity=0.294 Sum_probs=129.0
Q ss_pred HHHhhhhccchhhhhhhhhcccCCcchhhHHHHHH-----HHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh
Q 022133 62 LFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSM-----CLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (302)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~ 136 (302)
...++.+.++...+.+.+++..+.++...+...+. ..++..+++++.|+++||+|||+++..+.++..++.++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~ 83 (394)
T TIGR00883 4 VEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIG 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 34455555666666666665432222222333332 2333457899999999999999999999999999999999
Q ss_pred hcchhH--------HHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhccc-------
Q 022133 137 TTRNLI--------GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK------- 201 (302)
Q Consensus 137 ~~~~~~--------~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~------- 201 (302)
+.+++. .+++.|+++|++.+...+....++.|++|+++|++..++...+..+|.++++.++..+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~ 163 (394)
T TIGR00883 84 LLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDA 163 (394)
T ss_pred hCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 888764 47888999999999999999999999999999999999999999999999988776543
Q ss_pred -ccCcchHHHHHHhHHHHHHHHHHhhccCCCh
Q 022133 202 -EIAGWWRICFWVSIVPAAILCLAMVFCAESP 232 (302)
Q Consensus 202 -~~~g~w~~~~~~~~~~~~~~~~~~~~~pe~~ 232 (302)
+..+ ||+.|++.++..++..+.....||++
T Consensus 164 ~~~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (394)
T TIGR00883 164 LLEWG-WRIPFLVSAVLVLIGLYLRRNLEETP 194 (394)
T ss_pred hhccc-hHHHHHHHHHHHHHHHHHHHhcCCCh
Confidence 2345 99999887777666665555667764
No 77
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.76 E-value=1.9e-17 Score=149.35 Aligned_cols=172 Identities=15% Similarity=0.159 Sum_probs=144.0
Q ss_pred HHHHHHHHHHHHhhhhccchhhhhhhhh---cccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhh-hhHHHHHHHHHHHH
Q 022133 53 VLVATLSSFLFGYHLGVVNEPLESISLD---LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPM 128 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~Grr~~~~~~~~~~ 128 (302)
+..+.+..+...+..+...+.+|.+..+ +|++..+. +++.+.+.++..++++++|+++|| +|||+++.++.++.
T Consensus 12 ~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~a--g~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~ 89 (475)
T TIGR00924 12 LFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQA--FIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVL 89 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHH--HHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHH
Confidence 4445555666666666667777777554 67766555 899999999999999999999999 89999999999999
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCc---cchhHhHHHHHHHHHHHHHHHHhhcccccCc
Q 022133 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFV---RGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (302)
Q Consensus 129 ~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~---R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 205 (302)
+++.++++++++...+++++++.|++.|...+...++++|++|+++ |+.+.+++..+.++|.+++|.+++.+.+..+
T Consensus 90 ~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g 169 (475)
T TIGR00924 90 MLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYG 169 (475)
T ss_pred HHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999988888888889999999999998999999999998865 8889999999999999999999999988777
Q ss_pred chHHHHHHhHHHHHHHHHHhhc
Q 022133 206 WWRICFWVSIVPAAILCLAMVF 227 (302)
Q Consensus 206 ~w~~~~~~~~~~~~~~~~~~~~ 227 (302)
|++.|++.++..+++++.+++
T Consensus 170 -~~~~f~~~~~~~~~~~l~~~~ 190 (475)
T TIGR00924 170 -YHVGFNLAAVGMVIGLLTFFA 190 (475)
T ss_pred -hHHHHHHHHHHHHHHHHHHHH
Confidence 999998877655555444444
No 78
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.76 E-value=6.5e-17 Score=143.30 Aligned_cols=157 Identities=15% Similarity=0.071 Sum_probs=125.7
Q ss_pred HHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHH
Q 022133 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI 134 (302)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~ 134 (302)
...++.+......+...++++.+.+++|.+.++. |++.+.+.++..+++++.|+++||+|||+++..+..+.+++.++
T Consensus 17 ~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~ 94 (402)
T TIGR00897 17 WGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQS--ASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAA 94 (402)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHh--HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 3444444444444445556677778888877665 89999999999999999999999999999999999988887765
Q ss_pred Hh---h-cchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHH-HHHHHHhhcccccCcchHH
Q 022133 135 SA---T-TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGL-MGSLLIGIPVKEIAGWWRI 209 (302)
Q Consensus 135 ~~---~-~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~g~w~~ 209 (302)
+. . .+++..+++.|++.|++.+...+.....+.+++|+++|++++|+++.+..+|. .++|.+++.+.+..| |+.
T Consensus 95 ~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g-~~~ 173 (402)
T TIGR00897 95 FIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG-EMN 173 (402)
T ss_pred HHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-hHH
Confidence 42 3 35788888999999999887777777888999999999999999999999996 589999888887777 555
Q ss_pred HHHHh
Q 022133 210 CFWVS 214 (302)
Q Consensus 210 ~~~~~ 214 (302)
.++..
T Consensus 174 ~~~~~ 178 (402)
T TIGR00897 174 TLWSA 178 (402)
T ss_pred HHHHH
Confidence 55443
No 79
>PTZ00207 hypothetical protein; Provisional
Probab=99.75 E-value=5.8e-17 Score=147.27 Aligned_cols=155 Identities=19% Similarity=0.092 Sum_probs=121.3
Q ss_pred hccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc------chh
Q 022133 68 GVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT------RNL 141 (302)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~------~~~ 141 (302)
+.++.+.+.+.+++|++..+. +++.++. ....+++++.|+++||+|||++++++.++.+++.++++++ +++
T Consensus 44 y~fsv~s~~L~~~lgls~~~l--~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~ 120 (591)
T PTZ00207 44 YAFNLISGAMQARYNLTQRDL--STITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSV 120 (591)
T ss_pred HHHHHHHHHHHHHhCcCHHHH--HHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcH
Confidence 345567788899999887765 6666653 3445677889999999999999999999999999988886 688
Q ss_pred HHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHH-HHHHhhcccccCcchHHHHHHhHHHHHH
Q 022133 142 IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMG-SLLIGIPVKEIAGWWRICFWVSIVPAAI 220 (302)
Q Consensus 142 ~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~g~w~~~~~~~~~~~~~ 220 (302)
+.+++.|++.|++.+...+.....+.++|| ++||.+.|+...+.++|+.+ +++..+++. .+ |+..|++.++..++
T Consensus 121 ~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~-~~~~fl~l~vl~~v 196 (591)
T PTZ00207 121 VRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DN-TSAYFFFLMSFALV 196 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hh-HHHHHHHHHHHHHH
Confidence 999999999999999888888899999997 77999999999999999875 565555544 23 67766665555444
Q ss_pred -HHHHhhccC
Q 022133 221 -LCLAMVFCA 229 (302)
Q Consensus 221 -~~~~~~~~p 229 (302)
+++.+++++
T Consensus 197 v~ll~~~~vr 206 (591)
T PTZ00207 197 VGILAIVFMR 206 (591)
T ss_pred HHHHHHhhee
Confidence 444444443
No 80
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.75 E-value=4e-18 Score=151.81 Aligned_cols=170 Identities=19% Similarity=0.139 Sum_probs=139.8
Q ss_pred HHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhh--
Q 022133 60 SFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT-- 137 (302)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~-- 137 (302)
.++.........+.+|.+.++++.+.. ..|++.+...++..+++++.|+++||+|||+++..+.++.+++.+..+.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~s~~--~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~ 103 (417)
T PRK10489 26 RFISIFGLGLLGVAVPVQIQMMTGSTL--QVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNA 103 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHH
Confidence 444444555667778888888776544 4599999999999999999999999999999998888777766554432
Q ss_pred ---cchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHh
Q 022133 138 ---TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS 214 (302)
Q Consensus 138 ---~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~ 214 (302)
.++++.+++.|++.|++.+...+....++.|++|+++|+++.++......+|..+||.+++.+.+..+ |++.+++.
T Consensus 104 ~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~-~~~~~~~~ 182 (417)
T PRK10489 104 FLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGG-VAWNYGLA 182 (417)
T ss_pred HcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHh-hHHHHHHH
Confidence 46778888999999999888888888999999999999999999999999999999999999887777 89999887
Q ss_pred HHHHHHHHHHhhccCCCh
Q 022133 215 IVPAAILCLAMVFCAESP 232 (302)
Q Consensus 215 ~~~~~~~~~~~~~~pe~~ 232 (302)
++..++..+..+.+|+++
T Consensus 183 ~~~~~~~~~~~~~l~~~~ 200 (417)
T PRK10489 183 AAGTFITLLPLLRLPALP 200 (417)
T ss_pred HHHHHHHHHHHHhCCCCC
Confidence 777777666667777753
No 81
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.73 E-value=9.3e-17 Score=139.94 Aligned_cols=148 Identities=18% Similarity=0.246 Sum_probs=127.3
Q ss_pred hccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 022133 68 GVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLG 147 (302)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 147 (302)
....+.+|.+.+++|++.++. +++.+++.++..+++++.|+++||+|||+++.++.++.+++.+.. ..++...+++.
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~ 93 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVA--GLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAG 93 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHH
Confidence 457788999999999987766 899999999999999999999999999999999998888877776 67888888999
Q ss_pred HHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcc-hHHHHHHhHHHHH
Q 022133 148 RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW-WRICFWVSIVPAA 219 (302)
Q Consensus 148 r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~-w~~~~~~~~~~~~ 219 (302)
|++.|++.+...+....++.|++| ++|+++.++++.+..+|..+++.+++.+.+..+. ||+.|.+.++..+
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~ 165 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPAL 165 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 999999999888788888899987 5799999999999999999999988887765433 8888876554433
No 82
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.73 E-value=1.5e-17 Score=139.80 Aligned_cols=150 Identities=15% Similarity=0.145 Sum_probs=135.9
Q ss_pred hhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcc
Q 022133 78 SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGL 157 (302)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~ 157 (302)
.++...+.++..+|++.+...+.+.+.+++.|.+.||+|+|..+++|++++..+++++++.++++.++++|.++|+|.+.
T Consensus 96 ~~~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~ 175 (464)
T KOG3764|consen 96 AEAISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAF 175 (464)
T ss_pred hhccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHH
Confidence 34444445556679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHhhhcCCCC-ccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhhcc
Q 022133 158 GPTVAALYVTEVSPPF-VRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFC 228 (302)
Q Consensus 158 ~~~~~~~~~~e~~p~~-~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~ 228 (302)
..+...+++++.||.+ +|++++|+...+.++|..+||.+|+.+.+..| .+.+|++.++..++...+.+++
T Consensus 176 ~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G-k~aPFlVL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 176 ADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG-KSAPFLVLAIVLLLDGALQLLV 246 (464)
T ss_pred HHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC-CcCcHHHHHHHHHHHHHHHHhe
Confidence 9999999999999986 47999999999999999999999999999999 7999999888887766666554
No 83
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.70 E-value=8.9e-16 Score=139.21 Aligned_cols=175 Identities=17% Similarity=0.188 Sum_probs=139.2
Q ss_pred HHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhh-----hHHHH-HHHHHH
Q 022133 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-----GRRRA-FQLCAL 126 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-----Grr~~-~~~~~~ 126 (302)
.....+..+..+......+..+|.+.++.|.+.++. +.. +.....+ ++.+++|+++||+ |||+. ++.+.+
T Consensus 14 ~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~i--g~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i 89 (491)
T PRK11010 14 SAILLILGFASGLPLALTSGTLQAWMTVENIDLKTI--GFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQL 89 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH--HHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHH
Confidence 344555556667777778888898888888876665 544 3333333 6899999999999 99885 567777
Q ss_pred HHHHHHHHHhhc---chhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccc-
Q 022133 127 PMIIGASISATT---RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE- 202 (302)
Q Consensus 127 ~~~i~~~~~~~~---~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~- 202 (302)
+.+++...+++. ++++.+.+.+++.+++.+...+...++..|++|+++|+++.++...+..+|.++++.++..+.+
T Consensus 90 ~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~ 169 (491)
T PRK11010 90 LLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADR 169 (491)
T ss_pred HHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 777776666654 4677888899999999998888999999999999999999999999999999999999998887
Q ss_pred cCcchHHHHHHhHHHHHHHHHHhhccCCCh
Q 022133 203 IAGWWRICFWVSIVPAAILCLAMVFCAESP 232 (302)
Q Consensus 203 ~~g~w~~~~~~~~~~~~~~~~~~~~~pe~~ 232 (302)
..| ||..|++.++..++..+..++.||++
T Consensus 170 ~~G-Wr~~f~i~a~l~ll~~l~~~~~~e~~ 198 (491)
T PRK11010 170 YLG-WQGMYWLMAALLIPCIIATLLAPEPT 198 (491)
T ss_pred ccC-HHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 456 99999998777777666666678863
No 84
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.70 E-value=3.5e-16 Score=155.91 Aligned_cols=161 Identities=9% Similarity=-0.012 Sum_probs=126.0
Q ss_pred hhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh---hcchhHHHHHHH
Q 022133 72 EPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA---TTRNLIGMLLGR 148 (302)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~r 148 (302)
...+.+..+++.+.+....+++.+++.++.+++++++|+++||+|||++++++.++.+++.+++. ..++++.++++|
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 110 (1146)
T PRK08633 31 LIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVT 110 (1146)
T ss_pred HHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 33444555566665555568999999999999999999999999999999988876655554433 356789999999
Q ss_pred HHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhccccc--------CcchHHHHHHh-HHHHH
Q 022133 149 FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI--------AGWWRICFWVS-IVPAA 219 (302)
Q Consensus 149 ~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~--------~g~w~~~~~~~-~~~~~ 219 (302)
++.|++.+...+...+++.|++|+++|++++++...+..+|.++++++++++... .++|.+.+.+. ....+
T Consensus 111 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (1146)
T PRK08633 111 FLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAV 190 (1146)
T ss_pred HHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988765 23344444333 33334
Q ss_pred HHHHHhhccCCCh
Q 022133 220 ILCLAMVFCAESP 232 (302)
Q Consensus 220 ~~~~~~~~~pe~~ 232 (302)
++++..+++||+|
T Consensus 191 ~~~~~~~~~~~~~ 203 (1146)
T PRK08633 191 LGLIFAYRLPKVP 203 (1146)
T ss_pred HHHHHHhcCcCCC
Confidence 4445556677764
No 85
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.70 E-value=2.6e-16 Score=133.88 Aligned_cols=181 Identities=20% Similarity=0.142 Sum_probs=147.6
Q ss_pred HHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH
Q 022133 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (302)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~ 129 (302)
.+.+.+..++.....+.....++..+.+.+++|+|.++. +++.++..+..++..++.|.+.||+|.|++..+++++..
T Consensus 13 ~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~--~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~ 90 (417)
T COG2223 13 RRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQK--GLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLL 90 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHH--HHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHH
Confidence 334555555555555666677777888889999988877 899999999999999999999999999999999999999
Q ss_pred HHHHHHhhcch---hHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCc-
Q 022133 130 IGASISATTRN---LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG- 205 (302)
Q Consensus 130 i~~~~~~~~~~---~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g- 205 (302)
+.++..+++.+ ++.+++++++.|++ |+.+.+...+++.+||++++|.++|++. ..++|..+..++++.+....+
T Consensus 91 IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~ 168 (417)
T COG2223 91 IPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGF 168 (417)
T ss_pred HHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhh
Confidence 99998888754 45999999999996 5566788899999999999999999999 888898888888888877776
Q ss_pred -chHHHHHHhHHHHHH-HHHHhhccCCChHH
Q 022133 206 -WWRICFWVSIVPAAI-LCLAMVFCAESPHW 234 (302)
Q Consensus 206 -~w~~~~~~~~~~~~~-~~~~~~~~pe~~~~ 234 (302)
.|+....+..+..++ .+..++++.+.|..
T Consensus 169 ~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~ 199 (417)
T COG2223 169 LAWRNVAGIYVVALAIAAVLAWLGMNDVPEH 199 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhh
Confidence 388887776666555 44555666666553
No 86
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.69 E-value=7e-16 Score=140.57 Aligned_cols=167 Identities=11% Similarity=-0.005 Sum_probs=110.1
Q ss_pred hhhhccchhhhhhhhhcccCCcchh----------hHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHH
Q 022133 65 YHLGVVNEPLESISLDLGFNGNTLA----------EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI 134 (302)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~ 134 (302)
+..+....+.|.+.++.|++.+... ......+..++.+++.++.++++||+|||+.++++.++.++++.+
T Consensus 302 ~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~ 381 (502)
T TIGR00887 302 IAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFV 381 (502)
T ss_pred HHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHH
Confidence 3333455567777778887654210 001233344566778899999999999999998888777766655
Q ss_pred Hhhcc----hhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCc-----
Q 022133 135 SATTR----NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG----- 205 (302)
Q Consensus 135 ~~~~~----~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g----- 205 (302)
.++.. +...+...-+...++..+..+..+.+.+|.+|++.|+++.++.+....+|.+++|.+.+.+.+..+
T Consensus 382 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 461 (502)
T TIGR00887 382 LGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGY 461 (502)
T ss_pred HHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccc
Confidence 54321 111111111122222223345667888999999999999999999999999999999998876421
Q ss_pred ----chHHHHHHhHHHHHHHHHHhhccCCC
Q 022133 206 ----WWRICFWVSIVPAAILCLAMVFCAES 231 (302)
Q Consensus 206 ----~w~~~~~~~~~~~~~~~~~~~~~pe~ 231 (302)
++...|++.+++.+++.+..+++|||
T Consensus 462 ~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt 491 (502)
T TIGR00887 462 PTGIWMGHVLEIFALFMFLGILFTLLIPET 491 (502)
T ss_pred cccccchHHHHHHHHHHHHHHHHheEeccC
Confidence 13455666666666665566778998
No 87
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.69 E-value=1.2e-15 Score=135.26 Aligned_cols=170 Identities=19% Similarity=0.167 Sum_probs=137.3
Q ss_pred HHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhh-----hHHH-HHHHHHHHHHHH
Q 022133 58 LSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-----GRRR-AFQLCALPMIIG 131 (302)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-----Grr~-~~~~~~~~~~i~ 131 (302)
..++.++...+.....+|.+.++.|++.++. |++..+... .+..+++|+++||+ |||+ .++++.++.+++
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~i--g~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMTVEGLDIQTI--GFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 4456667777778889999999999988877 777655554 58999999999999 7765 678888888777
Q ss_pred HHHHhhc---chhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccC-cch
Q 022133 132 ASISATT---RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA-GWW 207 (302)
Q Consensus 132 ~~~~~~~---~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-g~w 207 (302)
....++. .+++.+++..++.+++.+...+...+++.|++|+++|+++.++...+..+|..+++.++..+.+.. | |
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~g-w 160 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLG-W 160 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccC-H
Confidence 7776665 346667777777888888888899999999999999999999999999999999999888887754 6 9
Q ss_pred HHHHHHhHHHHHHHHHHhhccCCCh
Q 022133 208 RICFWVSIVPAAILCLAMVFCAESP 232 (302)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~pe~~ 232 (302)
|..|++.++..++..+..++.||++
T Consensus 161 ~~~f~i~a~~~l~~~l~~~~~~e~~ 185 (402)
T PRK11902 161 GNTYLLMAGLMLAGALTTLWAPEPE 185 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999987777666655566677763
No 88
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.68 E-value=7.1e-16 Score=153.50 Aligned_cols=141 Identities=15% Similarity=0.089 Sum_probs=116.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH---HHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHh
Q 022133 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL---PMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYV 166 (302)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~ 166 (302)
.++..+++.+.++++++++|+++||+|||+++..... +.++..+.....++++.++++|+++|++.+...+...+++
T Consensus 54 ~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l 133 (1140)
T PRK06814 54 VTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSIL 133 (1140)
T ss_pred HHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhh
Confidence 4778889999999999999999999999997643222 2222222223347899999999999999999999999999
Q ss_pred hhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhhccCCC
Q 022133 167 TEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (302)
Q Consensus 167 ~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~pe~ 231 (302)
.+++|+++|++++|+.+++..+|.++||.+++++....+ |++.|+..++..++++++.+++|++
T Consensus 134 ~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (1140)
T PRK06814 134 PDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGN-FVILVALLMGIAVLGWLASLFIPKT 197 (1140)
T ss_pred HhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 999999999999999999999999999999999988877 8888866666666666666777765
No 89
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.68 E-value=1.4e-15 Score=138.18 Aligned_cols=167 Identities=16% Similarity=0.155 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHhhhhccchhhhhh-hhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhh-hhHHHHHHHHHHHHHH
Q 022133 53 VLVATLSSFLFGYHLGVVNEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMII 130 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~Grr~~~~~~~~~~~i 130 (302)
+..+.+..+......+.+..+++.+ .+++|++..+. +++.+.+........+++|+++|| +|||+.++++.++.++
T Consensus 23 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a--~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~i 100 (500)
T PRK09584 23 FYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADS--ITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAI 100 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 3444455555555555555555554 47788876655 566666665555666789999999 5999999999999999
Q ss_pred HHHHHhhcc-hhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCc--cchhHhHHHHHHHHHHHHHHHHhhcccccCcch
Q 022133 131 GASISATTR-NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFV--RGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWW 207 (302)
Q Consensus 131 ~~~~~~~~~-~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~--R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w 207 (302)
+..++++++ +...+.+.+++.|++.|...+...+++.|++|+++ |..+.++++.+.++|.+++|.+++++.+..| |
T Consensus 101 g~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g-~ 179 (500)
T PRK09584 101 GYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYG-W 179 (500)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhC-H
Confidence 988888764 45667788999999999888888899999998754 4457888889999999999999999988888 9
Q ss_pred HHHHHHhHHHHHHHH
Q 022133 208 RICFWVSIVPAAILC 222 (302)
Q Consensus 208 ~~~~~~~~~~~~~~~ 222 (302)
|+.|++.++..++++
T Consensus 180 ~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 180 SVAFALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999998765444433
No 90
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.68 E-value=2.8e-15 Score=131.98 Aligned_cols=164 Identities=12% Similarity=0.084 Sum_probs=125.1
Q ss_pred HHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHH----HHHHHHHHHHHHHHHHH
Q 022133 60 SFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRR----RAFQLCALPMIIGASIS 135 (302)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr----~~~~~~~~~~~i~~~~~ 135 (302)
.+......+.+.+++|.+.+++|.+..+. |++.+++.++..++++++|+++||+||| +.+.++..+. .....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~i--G~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~ 88 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETI--GLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFW 88 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHH--HHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHH
Confidence 44444556778889999999988876655 9999999999999999999999999984 3332222221 22233
Q ss_pred hhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhH
Q 022133 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSI 215 (302)
Q Consensus 136 ~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~ 215 (302)
...++++.+++.|++.|++.+...+...++..++ .++|+++.+.......+|..++|.+++.+.+..| ||..|++.+
T Consensus 89 ~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g-~~~~f~~~~ 165 (382)
T PRK11128 89 FGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFG-EQAILWILT 165 (382)
T ss_pred HhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcC-hhHHHHHHH
Confidence 3457888888999999999888888877777776 4568888888888889999999999999998888 999998776
Q ss_pred HHHHHHHHHhhccCC
Q 022133 216 VPAAILCLAMVFCAE 230 (302)
Q Consensus 216 ~~~~~~~~~~~~~pe 230 (302)
+..++.++..++.||
T Consensus 166 ~~~~~~~~~~~~~~~ 180 (382)
T PRK11128 166 AGVASMLLGQLLRPT 180 (382)
T ss_pred HHHHHHHHHHHccCC
Confidence 655544444444454
No 91
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.68 E-value=2.7e-15 Score=133.11 Aligned_cols=159 Identities=23% Similarity=0.190 Sum_probs=130.1
Q ss_pred ccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHH
Q 022133 69 VVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGR 148 (302)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r 148 (302)
....+.|.+.++.|.+.... +...+...++.+++.++.|+++||+|||+.+..+.+..+++.+...+.++...+.+..
T Consensus 238 ~~~~~~p~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (406)
T PRK11551 238 FLLNWLPSLLVGQGLSRSQA--GLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAG 315 (406)
T ss_pred HHHHHHHHHHHhCCCChhhh--hHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 34456777777788776655 7888999999999999999999999999999887777777766666677777777777
Q ss_pred HHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhhcc
Q 022133 149 FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFC 228 (302)
Q Consensus 149 ~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~ 228 (302)
++.|++.++..+....++.|.+|+++|+++.|+.+....+|.+++|.+++.+.+..+.|...++......+++.+..+++
T Consensus 316 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 316 FAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888788888899999999999999999999999999999999999998876657777777666666655555544
Q ss_pred C
Q 022133 229 A 229 (302)
Q Consensus 229 p 229 (302)
.
T Consensus 396 ~ 396 (406)
T PRK11551 396 V 396 (406)
T ss_pred h
Confidence 3
No 92
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.67 E-value=3.1e-15 Score=131.69 Aligned_cols=159 Identities=11% Similarity=0.005 Sum_probs=123.9
Q ss_pred HHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH-HHHHHH-H
Q 022133 56 ATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL-PMIIGA-S 133 (302)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~-~~~i~~-~ 133 (302)
+.+..+......+...|++|.+.+++|.+..+. |++.+++.++..++++++|+++||+||+........ ..++.. .
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~i--g~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~ 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMI--GLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAA 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 445555656666778899999999999876665 899999999999999999999999998543322211 111111 2
Q ss_pred HHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHH
Q 022133 134 ISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (302)
Q Consensus 134 ~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~ 213 (302)
....+++++.+++.|.+.|.+.+...+...++..++ .++|++..+....+.++|.+++|.+++.+.+..| ||..|++
T Consensus 87 ~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g-~~~~f~~ 163 (382)
T TIGR00902 87 FSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFD-EQNILAI 163 (382)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcC-hhHHHHH
Confidence 334568899999999999998888888888887664 5778999999999999999999999999999888 9999887
Q ss_pred hHHHHH
Q 022133 214 SIVPAA 219 (302)
Q Consensus 214 ~~~~~~ 219 (302)
..+..+
T Consensus 164 ~~~~~~ 169 (382)
T TIGR00902 164 LTAGLA 169 (382)
T ss_pred HHHHHH
Confidence 654433
No 93
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.67 E-value=2.7e-15 Score=134.22 Aligned_cols=170 Identities=18% Similarity=0.156 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHhhhhccchhhhhhh-hhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhh-hHHHHHHHHHHHHHH
Q 022133 53 VLVATLSSFLFGYHLGVVNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-GRRRAFQLCALPMII 130 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-Grr~~~~~~~~~~~i 130 (302)
+..+.+..+...+..+....++|.+. +++|++..+. +.+.+.+.....++++++|+++||+ |||++++++.++.++
T Consensus 11 l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a--~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~l 88 (493)
T PRK15462 11 IYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHA--YELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAI 88 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHH
Confidence 44444444555555555666666554 4568776655 7888888888899999999999999 999999999999988
Q ss_pred HHHHHhhcc-hhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCC--ccchhHhHHHHHHHHHHHHHHHHhhcccccCcch
Q 022133 131 GASISATTR-NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPF--VRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWW 207 (302)
Q Consensus 131 ~~~~~~~~~-~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~--~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w 207 (302)
+.++++... +...+.++..+.+++.|...+...++++|++|++ +|.++.++...+..+|++++|.+.+++.+..| |
T Consensus 89 g~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~G-w 167 (493)
T PRK15462 89 GHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYS-W 167 (493)
T ss_pred HHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhC-h
Confidence 887665433 2233444444555666776677788999999986 69999999888888999999999999988888 9
Q ss_pred HHHHHHhHHHHHHHHHHh
Q 022133 208 RICFWVSIVPAAILCLAM 225 (302)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~ 225 (302)
++.|.+.++..+++++.+
T Consensus 168 ~~~F~iaaigm~l~li~~ 185 (493)
T PRK15462 168 AMGFGLAAVGMIAGLVIF 185 (493)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999988765545444443
No 94
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.67 E-value=4.8e-15 Score=130.99 Aligned_cols=156 Identities=13% Similarity=0.174 Sum_probs=123.9
Q ss_pred chhhhhhh-hhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 022133 71 NEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149 (302)
Q Consensus 71 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~ 149 (302)
....|.+. +++|++..+. +++.+...++.+++.++.|+++||+|||+.+..+.+..++........++.+.+++.++
T Consensus 236 ~~~~p~~l~~~~~~~~~~~--g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 313 (393)
T PRK15011 236 IINMPLFIINELHLPEKLA--GVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQL 313 (393)
T ss_pred HHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 34555444 5577765544 77777777778889999999999999999888776665555544455667777778888
Q ss_pred HHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhhccC
Q 022133 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCA 229 (302)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~p 229 (302)
+.+++.+...+....+..|.+|. +|+++.++++....+|..+++.+++.+.+..+ |+..+++..++.+++++..++.|
T Consensus 314 l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 391 (393)
T PRK15011 314 LNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWN-YHAVFWFALVMIIATLFCLLRIK 391 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHhhc
Confidence 88888877777777888999986 59999999988899999999999999988777 89999988888888887777776
Q ss_pred C
Q 022133 230 E 230 (302)
Q Consensus 230 e 230 (302)
|
T Consensus 392 ~ 392 (393)
T PRK15011 392 D 392 (393)
T ss_pred C
Confidence 5
No 95
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.67 E-value=6.4e-16 Score=115.74 Aligned_cols=135 Identities=21% Similarity=0.370 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCc
Q 022133 95 SMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFV 174 (302)
Q Consensus 95 ~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~ 174 (302)
+.+.++..++.++.|++.||+|||+.+..+..+..++.+.....++.+.+.+.+++.|++.+...+....++.|.+|+++
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEE 84 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh
Confidence 44567788999999999999999999999999888888888888888889999999999999999999999999999999
Q ss_pred cchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHh-hccCC
Q 022133 175 RGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM-VFCAE 230 (302)
Q Consensus 175 R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~-~~~pe 230 (302)
|++..++.+....+|..+++.+.+.+.+..+ |++.+++.+...++..+.. ++.||
T Consensus 85 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 85 RGVALGLMSAGIALGPLLGPPLGGVLAQFLG-WRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhHHHHHHHHhHHHHHHHhHHhHHHHhcccc-hHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999988777 8888888766666554444 44555
No 96
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.66 E-value=7.4e-15 Score=129.92 Aligned_cols=172 Identities=19% Similarity=0.183 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHhhhhccchhhhhhhh-hcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Q 022133 54 LVATLSSFLFGYHLGVVNEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (302)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~ 132 (302)
+......++.........+++|.+.. ++|.+..+. |++.+++.++..++++++|+++||+|||+.++.+....+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~ 82 (396)
T TIGR00882 5 WMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDT--GIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLF 82 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 33444455555555666777776654 578776655 899999999999999999999999999999988776655443
Q ss_pred HHH---hhcc-----hhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccC
Q 022133 133 SIS---ATTR-----NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (302)
Q Consensus 133 ~~~---~~~~-----~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 204 (302)
... ...+ .+..+++.+++.|++.+...+....+..+.. +.++...+.......+|..++|.+++.+.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~- 159 (396)
T TIGR00882 83 APFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFSI- 159 (396)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhcc-
Confidence 322 1121 2334566688888888888888777777753 3345566777777889999999999987654
Q ss_pred cchHHHHHHhHHHHHHHHHHhhc-cCCC
Q 022133 205 GWWRICFWVSIVPAAILCLAMVF-CAES 231 (302)
Q Consensus 205 g~w~~~~~~~~~~~~~~~~~~~~-~pe~ 231 (302)
+ |+..|++.++..++..+..++ .||+
T Consensus 160 ~-~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 160 D-PQIVFWLGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred C-chHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 5 899998887776665554444 3443
No 97
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.66 E-value=2.6e-15 Score=130.84 Aligned_cols=160 Identities=16% Similarity=0.084 Sum_probs=124.6
Q ss_pred hccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhh-----hHHHHH-HHHHHHHHHHHHHHhhc---
Q 022133 68 GVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-----GRRRAF-QLCALPMIIGASISATT--- 138 (302)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-----Grr~~~-~~~~~~~~i~~~~~~~~--- 138 (302)
..+++..|.+.+++|++.++. |+..+. .+...+ .+++|+++||+ |||+.+ +.+.++.+++....++.
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~--g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~ 80 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTI--GFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPS 80 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHH--HHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 345677888999999988765 666544 444444 89999999998 898874 56677777776666665
Q ss_pred chhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcc-------hHHHH
Q 022133 139 RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW-------WRICF 211 (302)
Q Consensus 139 ~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~-------w~~~~ 211 (302)
.+.+.+.+..++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+....+. ||..|
T Consensus 81 ~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f 160 (356)
T TIGR00901 81 TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIF 160 (356)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHH
Confidence 34555666777888888888888899999999999999999999999999999999999887766552 89999
Q ss_pred HHhHHHHHHHHHHhhc-cCCC
Q 022133 212 WVSIVPAAILCLAMVF-CAES 231 (302)
Q Consensus 212 ~~~~~~~~~~~~~~~~-~pe~ 231 (302)
++.++..++.++..++ .||+
T Consensus 161 ~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 161 FWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred HHHHHHHHHHHHHHHHhccCC
Confidence 9888777766655443 5664
No 98
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.64 E-value=2.4e-14 Score=121.34 Aligned_cols=149 Identities=21% Similarity=0.255 Sum_probs=136.4
Q ss_pred HHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Q 022133 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (302)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~ 131 (302)
.+..+....++.++......+..|.+.+.++++..+. +.+..+++.|+.+.+++.|++.+|+|+|..++.|+.+++++
T Consensus 14 ~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a--~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg 91 (422)
T COG0738 14 AFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEA--SLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVG 91 (422)
T ss_pred HHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHH--HHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 4556667778888888889999999999999887776 89999999999999999999999999999999999999999
Q ss_pred HHHHh---hcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccc
Q 022133 132 ASISA---TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (302)
Q Consensus 132 ~~~~~---~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 202 (302)
++++. ...++..++++.++.|.|.+...+....+++.+.|++.-...+.+.+.++++|.+++|.+++.+..
T Consensus 92 ~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 92 AALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred HHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 99885 457889999999999999999999999999999999888889999999999999999999998776
No 99
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.64 E-value=1.2e-14 Score=131.80 Aligned_cols=160 Identities=18% Similarity=0.071 Sum_probs=112.5
Q ss_pred ccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc---chhH-HH
Q 022133 69 VVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT---RNLI-GM 144 (302)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~---~~~~-~~ 144 (302)
....+.|.+.++.|.+.... ++......++.+++.++.++++||+|||+.++.+.++.+++.++++.. +... ..
T Consensus 289 ~~~~~~p~i~~~~g~~~~~~--~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~ 366 (479)
T PRK10077 289 VVLYYAPEIFKTLGASTDIA--LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVA 366 (479)
T ss_pred HHHHHHHHHHHHcCCCCchH--HHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHH
Confidence 34456677878888776544 466666777888999999999999999999999999888887765532 1111 22
Q ss_pred HHHHHHHhhhhcc-hhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcc------cccCcchHHHHHHhHHH
Q 022133 145 LLGRFVVGTGMGL-GPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV------KEIAGWWRICFWVSIVP 217 (302)
Q Consensus 145 ~~~r~~~g~~~~~-~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~------~~~~g~w~~~~~~~~~~ 217 (302)
..+.++.+.+.+. ..+..+.+++|.+|+++|++++|+.+....+|.++++.+.+.+ .+..+ |+..|++.++.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~ 445 (479)
T PRK10077 367 LLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFH-NGFSYWIYGCM 445 (479)
T ss_pred HHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhcc-CccHHHHHHHH
Confidence 2333444444433 2356789999999999999999999988888888876555533 34555 66777776555
Q ss_pred HHHHHH-HhhccCCC
Q 022133 218 AAILCL-AMVFCAES 231 (302)
Q Consensus 218 ~~~~~~-~~~~~pe~ 231 (302)
++++.+ .+++.||+
T Consensus 446 ~~~~~~~~~~~~~e~ 460 (479)
T PRK10077 446 GVLAALFMWKFVPET 460 (479)
T ss_pred HHHHHHHHHhccccC
Confidence 554444 44567887
No 100
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.63 E-value=3.7e-15 Score=130.32 Aligned_cols=148 Identities=18% Similarity=0.094 Sum_probs=121.2
Q ss_pred hhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchh--HHHHHHHH
Q 022133 72 EPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNL--IGMLLGRF 149 (302)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~r~ 149 (302)
...+.+.++++.+.++. +.+.+...++..+++++.|+++||+|||+.+.++.++.+++.+...+.++. ..+++..+
T Consensus 226 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (377)
T TIGR00890 226 GLYKPYGQSLGLSDGFL--VLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVA 303 (377)
T ss_pred HHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHH
Confidence 34455566777665444 788889999999999999999999999999999988888887776665532 33445677
Q ss_pred HHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHH
Q 022133 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILC 222 (302)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~ 222 (302)
+.|++.+...+..+.++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..| |++.|++.+++.++++
T Consensus 304 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 304 LVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIG-FEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhc-hhhHHHHHHHHHHHhc
Confidence 88888888877888899999999999999999999999999999999999988888 8999888766665543
No 101
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.63 E-value=1.6e-14 Score=127.82 Aligned_cols=157 Identities=15% Similarity=0.081 Sum_probs=128.3
Q ss_pred cchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 022133 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149 (302)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~ 149 (302)
...+.+.+..+.|.+ .. ++..+.+.++.+++.++.|++.||+|||+.+..+..+.+++.++....++...+++..+
T Consensus 235 ~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (399)
T PRK05122 235 IATFITLYYAARGWD--GA--ALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAA 310 (399)
T ss_pred HHHHHHHHHHHcccc--cc--hHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 344555555555552 22 46667788888999999999999999999999888888888877777778777888899
Q ss_pred HHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhhccC
Q 022133 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCA 229 (302)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~p 229 (302)
+.|++.+..++.....+.|.+|++.|+++.++++....+|..+++.+.+.+.+..| |+..+++.+++.+++++..++++
T Consensus 311 l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 311 LTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFG-YPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred HHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999998888888888899999999999999999999999999989898888777 89999888777777766666555
Q ss_pred CC
Q 022133 230 ES 231 (302)
Q Consensus 230 e~ 231 (302)
++
T Consensus 390 ~~ 391 (399)
T PRK05122 390 RR 391 (399)
T ss_pred cc
Confidence 44
No 102
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.63 E-value=1.5e-14 Score=127.93 Aligned_cols=175 Identities=13% Similarity=0.181 Sum_probs=124.5
Q ss_pred HHHHHHHHHHHhhhhccchhhhhh-hhhcccCCcchhhHHHHHHHHH-HHHHHHHHHHhhhhhhhHHHHH-HHHHHHHHH
Q 022133 54 LVATLSSFLFGYHLGVVNEPLESI-SLDLGFNGNTLAEGLVVSMCLG-GAFIGSTLSGWIADGVGRRRAF-QLCALPMII 130 (302)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~g~l~d~~Grr~~~-~~~~~~~~i 130 (302)
....+..++.+.......+.++.+ .+++|.+.++. |++.+...+ +..++.+++++ +||+|||+.+ +.+.++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~ 94 (393)
T PRK15011 18 TAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMV--GFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVL 94 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHH
Confidence 344445666666666667777764 56788877665 888766544 55566656666 9999999875 455566667
Q ss_pred HHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccc--hhHhHHHHHHHHHHHHHHHHhhcccccCcchH
Q 022133 131 GASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRG--TYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (302)
Q Consensus 131 ~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~ 208 (302)
++.+.+++++++.+++.+.+.+...+...+....+..++.+++.|. ...++.+.+.++|.+++|.+++.+.+..| ||
T Consensus 95 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~g-w~ 173 (393)
T PRK15011 95 ACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFS-FT 173 (393)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcC-hH
Confidence 7777788888887766655554444566777778888887776563 34577888999999999999999988778 99
Q ss_pred HHHHHhHHHHHHHH-HHhhccCCCh
Q 022133 209 ICFWVSIVPAAILC-LAMVFCAESP 232 (302)
Q Consensus 209 ~~~~~~~~~~~~~~-~~~~~~pe~~ 232 (302)
..|++.++..++.. +.++++||.+
T Consensus 174 ~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 174 VMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCccC
Confidence 99988776665544 4455678764
No 103
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.62 E-value=2.1e-14 Score=124.16 Aligned_cols=161 Identities=22% Similarity=0.329 Sum_probs=138.4
Q ss_pred hhhhccchhhhhhhhhc-ccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHH-HHHHHHHHHHHHHHHHhhcchhH
Q 022133 65 YHLGVVNEPLESISLDL-GFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRR-AFQLCALPMIIGASISATTRNLI 142 (302)
Q Consensus 65 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~-~~~~~~~~~~i~~~~~~~~~~~~ 142 (302)
........+.+.+.++. |.+..+. ++..+...++..++.++.+++.||+|||+ .+..+..+..++.+.....++..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 266 (352)
T cd06174 189 FGYYGLLTYLPLYLQEVLGLSAAEA--GLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLA 266 (352)
T ss_pred hHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHH
Confidence 33344555666666654 6555444 88999999999999999999999999999 99999999999999888888888
Q ss_pred HHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHH
Q 022133 143 GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILC 222 (302)
Q Consensus 143 ~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~ 222 (302)
.+.+..++.|++.+...+....++.|..|+++|++.+++.+....+|..+++.+.+.+.+..+ |+..+++.++..++..
T Consensus 267 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~-~~~~~~~~~~~~~i~~ 345 (352)
T cd06174 267 LLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGG-YGGVFLILAALALLAA 345 (352)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-cchHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999999999999999999999999999988777 8999998888877776
Q ss_pred HHhhcc
Q 022133 223 LAMVFC 228 (302)
Q Consensus 223 ~~~~~~ 228 (302)
+..+++
T Consensus 346 i~~~~~ 351 (352)
T cd06174 346 LLLLLL 351 (352)
T ss_pred HHheec
Confidence 665543
No 104
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.62 E-value=1.9e-14 Score=129.45 Aligned_cols=163 Identities=10% Similarity=0.053 Sum_probs=125.4
Q ss_pred HHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhh--hhHHHHHHH--HHHHHHHHHHH
Q 022133 59 SSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG--VGRRRAFQL--CALPMIIGASI 134 (302)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~--~Grr~~~~~--~~~~~~i~~~~ 134 (302)
..++..........+++.+.++.|++..+. +++.++..++.++++++.|+++|| +++|+...+ +.++.+++.++
T Consensus 249 ~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll 326 (455)
T TIGR00892 249 GNVIMFLGFFAPIIFLVPYAKDKGVDEYEA--AFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLL 326 (455)
T ss_pred HHHHHHHHccchHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHH
Confidence 333334444444556677777778766555 888999999999999999999997 334433333 33333444455
Q ss_pred HhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHh
Q 022133 135 SATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS 214 (302)
Q Consensus 135 ~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~ 214 (302)
....++++.+++.+++.|++.+...+....++.|.+|++++++.+++++....+|.+++|.+++.+.+..+.|+..|++.
T Consensus 327 ~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~ 406 (455)
T TIGR00892 327 CALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYAS 406 (455)
T ss_pred HHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHh
Confidence 56677888888899999999999988999999999999999999999999999999999999999988765588888887
Q ss_pred HHHHHHHHH
Q 022133 215 IVPAAILCL 223 (302)
Q Consensus 215 ~~~~~~~~~ 223 (302)
++..+++.+
T Consensus 407 ~~~~li~~~ 415 (455)
T TIGR00892 407 GSIVVSAGL 415 (455)
T ss_pred hHHHHHHHH
Confidence 766655544
No 105
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.61 E-value=1.1e-14 Score=129.66 Aligned_cols=160 Identities=14% Similarity=0.129 Sum_probs=125.7
Q ss_pred hhhhhhhhhcccCCc------chhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc-c---hh
Q 022133 72 EPLESISLDLGFNGN------TLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT-R---NL 141 (302)
Q Consensus 72 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~-~---~~ 141 (302)
.+.+.+.++.|.+.. ....+...++..++.+++.++.|+++||+|||+++..+.++.+++..+.... + ++
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~ 308 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGY 308 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhH
Confidence 444555666664431 1233788888888999999999999999999999999999888877666553 2 23
Q ss_pred HHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHH-HHHHHHHHHHHHHhhcccccCc-----chHHHHHHhH
Q 022133 142 IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQ-IATCLGLMGSLLIGIPVKEIAG-----WWRICFWVSI 215 (302)
Q Consensus 142 ~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~g-----~w~~~~~~~~ 215 (302)
..+++.+++.|++.+...+....++.|++|++.|+++.++.+ ....+|.+++|.+++.+.+..+ +|+..|++.+
T Consensus 309 ~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~ 388 (418)
T TIGR00889 309 ALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFA 388 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHH
Confidence 556778999999998888888899999999999999999987 6788999999999999887643 2899888776
Q ss_pred HHHHHH-HHHhhccCCC
Q 022133 216 VPAAIL-CLAMVFCAES 231 (302)
Q Consensus 216 ~~~~~~-~~~~~~~pe~ 231 (302)
++.+++ ++..++++|+
T Consensus 389 ~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 389 GYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHhCCc
Confidence 665554 4455667776
No 106
>PRK09952 shikimate transporter; Provisional
Probab=99.61 E-value=2.9e-14 Score=127.74 Aligned_cols=160 Identities=16% Similarity=0.127 Sum_probs=115.0
Q ss_pred cchhhhhh-hhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhh---c-chhHHH
Q 022133 70 VNEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT---T-RNLIGM 144 (302)
Q Consensus 70 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~---~-~~~~~~ 144 (302)
...+.|.+ .+++|.+.+.. ..+.....+...++.+++|+++||+|||+.++.+.++.+++.+.+.. . ++...+
T Consensus 269 ~~~~~~~y~~~~~g~s~~~~--~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (438)
T PRK09952 269 VTAFALNYSTQNLGLPRELF--LNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIV 346 (438)
T ss_pred HHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHH
Confidence 44455544 34567665432 34444556667788899999999999999998887766554433322 2 234444
Q ss_pred HHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhH-HHHHHHHHHHHHHHHhhcccccC-cchHHHHHHhHHHHHHHH
Q 022133 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAF-IQIATCLGLMGSLLIGIPVKEIA-GWWRICFWVSIVPAAILC 222 (302)
Q Consensus 145 ~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~-g~w~~~~~~~~~~~~~~~ 222 (302)
++..++.+++.+...+..++++.|.+|++.|+++.++ ++.+..+|+.++|.+.+.+.+.. +.|...+.+.++.++++.
T Consensus 347 ~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~ 426 (438)
T PRK09952 347 FFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISA 426 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHH
Confidence 4556667788887788888999999999999999998 55666789999999999987744 347888888777777777
Q ss_pred HHhhccCCC
Q 022133 223 LAMVFCAES 231 (302)
Q Consensus 223 ~~~~~~pe~ 231 (302)
+..+.++|+
T Consensus 427 v~~~~~~~~ 435 (438)
T PRK09952 427 MTALLMKDN 435 (438)
T ss_pred HHHHHcccc
Confidence 777777775
No 107
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.61 E-value=1.9e-14 Score=130.03 Aligned_cols=172 Identities=16% Similarity=0.133 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHhhhhccchhhhhhh-hhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Q 022133 53 VLVATLSSFLFGYHLGVVNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~ 131 (302)
++...+..++..........++|.+. +++|++..+. ++..+...++.+++.+++|+++||+|||+.++....+..++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a--~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~ 337 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDA--INTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALII 337 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 34444444444444444566777655 5578876655 78888899999999999999999999998776654444333
Q ss_pred HH--HHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHH-HHHHHHHHhhcccc------
Q 022133 132 AS--ISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCL-GLMGSLLIGIPVKE------ 202 (302)
Q Consensus 132 ~~--~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~-g~~~~~~~~~~~~~------ 202 (302)
.. ......+...+.+.+++.|++..+........+.|.+|++.||++.|+.+....+ |.+++|.+.|.+.+
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~ 417 (467)
T PRK09556 338 FTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGT 417 (467)
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccc
Confidence 22 2223345555667777888654444334446777999999999999999888776 77899999999888
Q ss_pred ------cCcchHHHHHHhHHHHHHHHHHhhc
Q 022133 203 ------IAGWWRICFWVSIVPAAILCLAMVF 227 (302)
Q Consensus 203 ------~~g~w~~~~~~~~~~~~~~~~~~~~ 227 (302)
..+ |+..|++..+..+++.+..++
T Consensus 418 ~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 418 PIFGYTLTG-WAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred ccccccccC-hHHHHHHHHHHHHHHHHHHHH
Confidence 455 899998876776666555544
No 108
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.60 E-value=1.2e-14 Score=129.63 Aligned_cols=140 Identities=12% Similarity=0.028 Sum_probs=118.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhc
Q 022133 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEV 169 (302)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~ 169 (302)
.|.+.++..++.+++.+++|+++||+|||+.+..+.++.+++.++.++.++.+.+++.+++.|++.+...+....++.|.
T Consensus 264 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 343 (420)
T PRK09528 264 FGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLN 343 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37888888889999999999999999999999999998888888888888888888889999998888777778899999
Q ss_pred CCCCccchhHhH-HHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHH-HhhccCC
Q 022133 170 SPPFVRGTYGAF-IQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCL-AMVFCAE 230 (302)
Q Consensus 170 ~p~~~R~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~-~~~~~pe 230 (302)
+|++.|++..+. ++....+|.++++.+.+.+.+..| |+..|.+.++..++..+ .+++.++
T Consensus 344 ~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G-~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 344 FDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIG-FQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred cCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhC-chHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999988766 677888999999999999999888 89999886666555443 3344444
No 109
>TIGR00898 2A0119 cation transport protein.
Probab=99.60 E-value=2.6e-14 Score=130.48 Aligned_cols=137 Identities=14% Similarity=0.016 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchh--HHHHHHHHHHhhhhcchhhhHHHHhhhc
Q 022133 92 LVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNL--IGMLLGRFVVGTGMGLGPTVAALYVTEV 169 (302)
Q Consensus 92 ~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~r~~~g~~~~~~~~~~~~~~~e~ 169 (302)
+......++.+++.++.++++||+|||+.+.++.++.++++++..+.++. ...++..++.+++.+..++..+.+.+|.
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 34445566777899999999999999999999999888888777765543 4445556677777777888889999999
Q ss_pred CCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhhccCCC
Q 022133 170 SPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (302)
Q Consensus 170 ~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~pe~ 231 (302)
+|++.|++++|+.+....+|.+++|.+.+ +.+ .+ +...+++.+...+++.+..+++||+
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~~-~~~~~~~~~~~~~~~~~~~~~lpet 497 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE-KW-LFLPLVLFGGLALLAGILTLFLPET 497 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-HH-HhhHHHHHHHHHHHHHHHHHcCcCC
Confidence 99999999999999999999999999988 433 33 4566666666666666777788998
No 110
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.59 E-value=2.4e-14 Score=129.13 Aligned_cols=172 Identities=15% Similarity=0.013 Sum_probs=123.7
Q ss_pred HHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh
Q 022133 57 TLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (302)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~ 136 (302)
.+..+...........+.|.+.++.|++.... ++......++.+++.++.|+++||+|||+.+.++.++.+++.++.+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 367 (481)
T TIGR00879 290 VLQWFQQFTGINAIMYYSPTIFENAGVSTDHA--FLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLG 367 (481)
T ss_pred HHHHHHHHhCCeehHHHHHHHHHHcCCCchHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 33333333334445667788888888877544 6788888888999999999999999999999988887777766655
Q ss_pred h-----cc------hhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCc
Q 022133 137 T-----TR------NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (302)
Q Consensus 137 ~-----~~------~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 205 (302)
+ .+ +...+....++.+.......+....++.|.+|++.|++++++.+....+|.+++|.+.+.+.+..+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~ 447 (481)
T TIGR00879 368 ILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIG 447 (481)
T ss_pred HHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 2 11 222222223332222223345666788999999999999999999999999999999998888777
Q ss_pred chHHHHHHhHHHHHHHHHHh-hccCCC
Q 022133 206 WWRICFWVSIVPAAILCLAM-VFCAES 231 (302)
Q Consensus 206 ~w~~~~~~~~~~~~~~~~~~-~~~pe~ 231 (302)
|++.|++.+++++++.+.. ++.||+
T Consensus 448 -~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 448 -VGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred -ccceehhHHHHHHHHHHHHheecccC
Confidence 8888887766666655544 556776
No 111
>PRK12382 putative transporter; Provisional
Probab=99.59 E-value=4.5e-14 Score=124.71 Aligned_cols=152 Identities=16% Similarity=0.150 Sum_probs=126.4
Q ss_pred cchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 022133 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149 (302)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~ 149 (302)
...+.+.+.++.+.+ +. ++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++...+++..+
T Consensus 235 ~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (392)
T PRK12382 235 IGTFVSLYFASKGWA--MA--GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAA 310 (392)
T ss_pred HHHHHHHHHHhcCCc--hh--HHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 444555555665553 22 46666777888899999999999999999999998888888877777788777788899
Q ss_pred HHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhh
Q 022133 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMV 226 (302)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~ 226 (302)
+.|++.+...+.....+.|.+|+++||++.++++....+|..++|.+.+.+.+..| |+..|++.+++.+++.+..+
T Consensus 311 l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 311 LTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG-YPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHHHHH
Confidence 99999988888888889999999999999999999999999999999999998888 89999988777777655544
No 112
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.58 E-value=6e-14 Score=125.13 Aligned_cols=166 Identities=20% Similarity=0.209 Sum_probs=107.4
Q ss_pred HHHHHHHhhhhccchhhhhhhhh-cccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh
Q 022133 58 LSSFLFGYHLGVVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (302)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~ 136 (302)
...++.....+...++++.+..+ +|++..+. |++.+++.++..++++++|+++||+|||++++++..+.+++.....
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~--g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 94 (420)
T PRK09528 17 LFFFFFFFIWSSWFSFFPIWLHDINGLSGTDT--GIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFF 94 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 34444444445566677666554 78876655 9999999999999999999999999999999887665544432211
Q ss_pred ---hcch-----hHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchH
Q 022133 137 ---TTRN-----LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (302)
Q Consensus 137 ---~~~~-----~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~ 208 (302)
..+. +...+++.++.|.+.....+....+..+ . .++++...+.......+|..++|.+++.+.+. + |+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~-~~ 170 (420)
T PRK09528 95 IYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFNI-N-PQ 170 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHhc-C-ch
Confidence 1111 1112223333333333333333333322 2 34567788888888899999999999988764 4 89
Q ss_pred HHHHHhHHHHHHHHHHhhccC
Q 022133 209 ICFWVSIVPAAILCLAMVFCA 229 (302)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~p 229 (302)
..|++.++..++.++..++.+
T Consensus 171 ~~f~~~~~~~~~~~~~~~~~~ 191 (420)
T PRK09528 171 INFWLGSGSALILLVLLFFAK 191 (420)
T ss_pred HhHHHHHHHHHHHHHHHhccc
Confidence 999887777666655555543
No 113
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.58 E-value=3.3e-14 Score=125.04 Aligned_cols=162 Identities=18% Similarity=0.124 Sum_probs=118.4
Q ss_pred HHHHHHHHHhhhhccchhhhhhh-hhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHH--
Q 022133 56 ATLSSFLFGYHLGVVNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA-- 132 (302)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~-- 132 (302)
.....+...........+.|.+. +++|.+.++. +...+...++..++.++.|+++||+|||+.+..+..+..+..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 301 (394)
T TIGR00883 224 GLGLVIATTTTFYLITTYLPTYLTQTLGLSANSA--LLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVP 301 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHH--HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHH
Confidence 33333444444444556667665 5567766554 788888889999999999999999999998775554443322
Q ss_pred HHHhh--cchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhH-HHHHHHHHHHHHHHHhhcccccCcchHH
Q 022133 133 SISAT--TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAF-IQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (302)
Q Consensus 133 ~~~~~--~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~g~w~~ 209 (302)
+.... .++...+++..++.|++.+...+....++.|.+|++.|+++.++ ++.+..+|..++|.+++.+.+..|.|+.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~ 381 (394)
T TIGR00883 302 LLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYA 381 (394)
T ss_pred HHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchh
Confidence 12222 24556666778888988888888999999999999999999998 5677788999999999999888775777
Q ss_pred HHHHhHHHHH
Q 022133 210 CFWVSIVPAA 219 (302)
Q Consensus 210 ~~~~~~~~~~ 219 (302)
.+++.++..+
T Consensus 382 ~~~~~~~~~l 391 (394)
T TIGR00883 382 IGYYLAALAL 391 (394)
T ss_pred HHHHHHHHHH
Confidence 7666554433
No 114
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.57 E-value=1.5e-13 Score=120.49 Aligned_cols=154 Identities=18% Similarity=0.276 Sum_probs=122.4
Q ss_pred hhhhh-hhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 022133 73 PLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVV 151 (302)
Q Consensus 73 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~ 151 (302)
..|.+ .+++|.+..+. +++.+...+...++.++.|+++||+|||+.+.++.++..+..+.....++.+.+++.+++.
T Consensus 221 ~~~~~~~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (375)
T TIGR00899 221 NMPLLIIHELGLPDKLA--GLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLN 298 (375)
T ss_pred hhHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34443 45677765544 6777766667778889999999999999998888776666555555566777777888899
Q ss_pred hhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhhccCC
Q 022133 152 GTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAE 230 (302)
Q Consensus 152 g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~pe 230 (302)
|++.+...+....++.|..|.+ |+++.++++....+|..++|.+++.+.+..| |+..|++.++..+++.+...+++|
T Consensus 299 g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 299 AIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWS-YHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHheecC
Confidence 9988888888888999998865 6799999999889999999999999988877 899999888887777777666653
No 115
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.56 E-value=2.6e-13 Score=119.96 Aligned_cols=163 Identities=17% Similarity=0.148 Sum_probs=123.6
Q ss_pred hhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcc-hhHHH
Q 022133 66 HLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR-NLIGM 144 (302)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~-~~~~~ 144 (302)
.......+.|.+..+.|.+..+. +...+.+.++.+++.++.|++.||+|||+.++++..+.+++.++....+ +...+
T Consensus 220 ~~~~~~~~lp~~l~~~g~s~~~a--g~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 297 (393)
T PRK09705 220 GYASLIAWLPAFYIEIGASAQYS--GSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL 297 (393)
T ss_pred HHHHHHHHHHHHHHHcCCChhhh--hHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH
Confidence 33345556777777778776655 8889999999999999999999999999999888877777766554333 32222
Q ss_pred HHHHHHHhhhhcchhhhHHHHhhhcCC-CCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHH
Q 022133 145 LLGRFVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCL 223 (302)
Q Consensus 145 ~~~r~~~g~~~~~~~~~~~~~~~e~~p-~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~ 223 (302)
..++.|++.+...+.......+.++ +++|++..++.+....++..++|.+.+++.+..|+|...|++..+.++...+
T Consensus 298 --~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK09705 298 --WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMI 375 (393)
T ss_pred --HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 2345688888877777767677775 6789999999999999999999999999999887788888887666555444
Q ss_pred -HhhccCCCh
Q 022133 224 -AMVFCAESP 232 (302)
Q Consensus 224 -~~~~~pe~~ 232 (302)
...+.||++
T Consensus 376 ~~~~~~~~~~ 385 (393)
T PRK09705 376 ITLRFAPARF 385 (393)
T ss_pred HHHHhccccc
Confidence 356678874
No 116
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.55 E-value=1.7e-13 Score=120.40 Aligned_cols=169 Identities=18% Similarity=0.138 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHhhhhccchhhhhhh-hhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHH--HHHH------H
Q 022133 54 LVATLSSFLFGYHLGVVNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRR--AFQL------C 124 (302)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~--~~~~------~ 124 (302)
....+..++..........+.|.+. +++|.+..+. +++.+...++..++.++.|+++||+|||+ .... +
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (399)
T TIGR00893 218 WGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEA--GFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIA 295 (399)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Confidence 3334444444444455556666655 4467655444 78888889999999999999999999996 1111 1
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccC
Q 022133 125 ALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (302)
Q Consensus 125 ~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 204 (302)
.++..+........++....+....+.+++.+ ..+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~ 374 (399)
T TIGR00893 296 GLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT 374 (399)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC
Confidence 11111111111122333433333444444444 67888999999999999999999999999999999999999999877
Q ss_pred cchHHHHHHhHHHHHHHHHHh
Q 022133 205 GWWRICFWVSIVPAAILCLAM 225 (302)
Q Consensus 205 g~w~~~~~~~~~~~~~~~~~~ 225 (302)
+.|+..+++.++..+++.+..
T Consensus 375 g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 375 GSFAGALMVVAALALIGALSY 395 (399)
T ss_pred CchhHHHHHHHHHHHHHHHHH
Confidence 657888887766666655444
No 117
>PRK03699 putative transporter; Provisional
Probab=99.55 E-value=2.2e-13 Score=120.53 Aligned_cols=170 Identities=12% Similarity=0.064 Sum_probs=130.5
Q ss_pred HHHHHHHhhhhccchhhhhhh-hhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh
Q 022133 58 LSSFLFGYHLGVVNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (302)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~ 136 (302)
+..++.......+..++|.+. +++|++..+. +.+.+.+.++.+++.++.|+++||+|||+.+.....+.++...+..
T Consensus 212 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~--~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~ 289 (394)
T PRK03699 212 IAALLYILAQLTFISWVPEYAQKKFGMSLEDA--GNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFV 289 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHh--hHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Confidence 333333333334556777776 4568776655 7888999999999999999999999999999888777777666666
Q ss_pred hcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHH
Q 022133 137 TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIV 216 (302)
Q Consensus 137 ~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~ 216 (302)
..++...+.+..++.|++.+..++...++..|..|. .++...+....+..+|..++|.+.+.+.+..| ++..+++.++
T Consensus 290 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g-~~~~~~~~~~ 367 (394)
T PRK03699 290 NTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFG-LQAALLTANG 367 (394)
T ss_pred HcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC-chhhhhhhHH
Confidence 677776677778888988888888877888887764 46778888888889999999999999998888 7888888777
Q ss_pred HHHHHHHHhhccCCC
Q 022133 217 PAAILCLAMVFCAES 231 (302)
Q Consensus 217 ~~~~~~~~~~~~pe~ 231 (302)
+.+++.+....+++.
T Consensus 368 ~~~~~~~~~~~~~~~ 382 (394)
T PRK03699 368 LYAVVFVMCILLGFV 382 (394)
T ss_pred HHHHHHHHHHHHHHH
Confidence 766666655555543
No 118
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.54 E-value=3.2e-17 Score=147.39 Aligned_cols=231 Identities=18% Similarity=0.140 Sum_probs=136.1
Q ss_pred CcchhhhhhhhcccCCCCCCCCccchhhhhhhhcCccc-cccCCCCcch--hHHHHHHHH-HHHHHHHhhhhccchhhhh
Q 022133 1 MWGRQREASMMYKRTSSRDRSSTFDVEETTALVQNGTE-VENTNPSWKL--SFPHVLVAT-LSSFLFGYHLGVVNEPLES 76 (302)
Q Consensus 1 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 76 (302)
+|||.+||++.+++.++++..+++..++ .++.++..+ +......++. ..+.+.... +..+...........+.+.
T Consensus 200 ~~~~~~~A~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~ 278 (451)
T PF00083_consen 200 SKGRDEEAEKVLRKLRGKEIEDEEIEEI-KAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPS 278 (451)
T ss_pred cccccccccccccccccccccccccccc-ccccccccccceeeeeccccccccccccccccccccccccccccccccccc
Confidence 4789999999999966543322222111 111111111 0011111111 111122222 2222222223345556677
Q ss_pred hhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh--h---cch-----hHHHHH
Q 022133 77 ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA--T---TRN-----LIGMLL 146 (302)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~--~---~~~-----~~~~~~ 146 (302)
+.+..+.+.+ . .......+...++.++..++.||+|||+.++.+.++.+++.+.++ . .++ ...+ +
T Consensus 279 i~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~ 353 (451)
T PF00083_consen 279 IFENAGISNS-F---LATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSI-V 353 (451)
T ss_pred cccccccccc-c---ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-e
Confidence 7777777665 2 223334445557777888999999999999999988887776664 1 111 1221 2
Q ss_pred HHHHHhhhhc-chhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHh
Q 022133 147 GRFVVGTGMG-LGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM 225 (302)
Q Consensus 147 ~r~~~g~~~~-~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~ 225 (302)
+-.+...+.+ +..+..+.+.+|.+|++.|+++.++......++.++++.+...+.+..+.+.....+.++..+..++.+
T Consensus 354 ~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~ 433 (451)
T PF00083_consen 354 FLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVY 433 (451)
T ss_pred eeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhhee
Confidence 2222222222 334566788999999999999999988888899999998888877666533344444555555566777
Q ss_pred hccCCChHHHHHhCCHHH
Q 022133 226 VFCAESPHWLYKKGRTAE 243 (302)
Q Consensus 226 ~~~pe~~~~~~~~~~~~~ 243 (302)
+++||| ++++.+
T Consensus 434 ~~lpET------~g~~l~ 445 (451)
T PF00083_consen 434 FFLPET------KGKTLE 445 (451)
T ss_pred EEEeeC------CCCCHH
Confidence 889999 777766
No 119
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.53 E-value=5e-13 Score=117.70 Aligned_cols=162 Identities=12% Similarity=-0.003 Sum_probs=132.6
Q ss_pred HHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcc
Q 022133 60 SFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR 139 (302)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~ 139 (302)
.++..........+.|.+.++.|.+.... |...+...++.+++.++.+++.||+|+|+.+.++.++.++..+..++.+
T Consensus 214 ~~l~~~~~~~~~~~~~~~l~~~g~s~~~~--g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~ 291 (382)
T TIGR00902 214 VCLIQGAHAAYYGFSAIYWQAAGISASAT--GLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIE 291 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHhHH--HHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHh
Confidence 33333334444556677777788776655 8888888889999999999999999999999999999999998888899
Q ss_pred hhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHH-HHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHH
Q 022133 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQ-IATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPA 218 (302)
Q Consensus 140 ~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~ 218 (302)
+++.+++.+++.|++.+...+....++.+. |+++|+++.++++ ...++|..+++.++|.+.+..| + ..|++.++.+
T Consensus 292 ~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-~-~~~~~~~~~~ 368 (382)
T TIGR00902 292 AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-A-GTFVFMAIIA 368 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHH
Confidence 999999999999999999999999999988 9999999999976 5788999999999999999887 5 4455555555
Q ss_pred HHHHHHhh
Q 022133 219 AILCLAMV 226 (302)
Q Consensus 219 ~~~~~~~~ 226 (302)
+++++..+
T Consensus 369 ~~~~~~~~ 376 (382)
T TIGR00902 369 AAAFFLIP 376 (382)
T ss_pred HHHHHHHH
Confidence 55554443
No 120
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.53 E-value=2.8e-13 Score=120.16 Aligned_cols=157 Identities=15% Similarity=0.134 Sum_probs=125.9
Q ss_pred cchhhhhhhhhcccCCcc--hhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 022133 70 VNEPLESISLDLGFNGNT--LAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLG 147 (302)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 147 (302)
..+..+.+..+.+.+.+. ...+.+.++..++..++.++.|+++||+|||+.+..+..+.+++.+.....++.+.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (408)
T PRK09874 238 IAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGIL 317 (408)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 344555555544322222 123556666778888999999999999999999999888887777777767777878888
Q ss_pred HHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhhc
Q 022133 148 RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVF 227 (302)
Q Consensus 148 r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~ 227 (302)
+++.|++.+...+....++.+..|++.||+.+++++....+|..++|.+++.+.+..| |+..|++.++..+++.+..++
T Consensus 318 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 318 RFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYG-FRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcc-hhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988888899999999999999999999999999999999999988888 899999887777776655543
No 121
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.52 E-value=2.4e-13 Score=121.18 Aligned_cols=159 Identities=14% Similarity=0.078 Sum_probs=129.1
Q ss_pred cchhhhhhhhh-cccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHH
Q 022133 70 VNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGR 148 (302)
Q Consensus 70 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r 148 (302)
...+.|.+.++ +|.+.... +++.+...++.+++.++.+++.||.++++.+..+.++.+++.++..+.++.....++.
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~--g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQI--GLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCL 319 (417)
T ss_pred HHHhhHHHHHhccCCChhHh--HHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 34456666666 77765554 8888999999999999999999998888888888888888877777788887777888
Q ss_pred HHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhH-HHHHHHHHHhhc
Q 022133 149 FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSI-VPAAILCLAMVF 227 (302)
Q Consensus 149 ~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~-~~~~~~~~~~~~ 227 (302)
++.|++.+...+...+++.|..|++.||++.++++....+|..+++.+.+.+.+..| ++..++..+ +..+++++....
T Consensus 320 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 320 ALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT-PVASASASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc-hhhHHHHHHHHHHHHHHHHHHh
Confidence 889998887777778899999999999999999999999999999999999998877 566665544 444445666666
Q ss_pred cCCC
Q 022133 228 CAES 231 (302)
Q Consensus 228 ~pe~ 231 (302)
+|+.
T Consensus 399 ~~~~ 402 (417)
T PRK10489 399 LGEL 402 (417)
T ss_pred cccc
Confidence 7776
No 122
>TIGR00895 2A0115 benzoate transport.
Probab=99.51 E-value=1.8e-13 Score=120.55 Aligned_cols=137 Identities=19% Similarity=0.171 Sum_probs=106.9
Q ss_pred HHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchh
Q 022133 62 LFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNL 141 (302)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~ 141 (302)
...........+.|.+.++.|.+.+.. ++..+...++.+++.++.|+++||+|||+.+....+..+...++.....+.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (398)
T TIGR00895 261 MLLVGVYFLTNWLPKLMVELGFSLSLA--ATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSP 338 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCH
Confidence 333334445556777778888776555 788899999999999999999999999955444443333333333334566
Q ss_pred HHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcc
Q 022133 142 IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (302)
Q Consensus 142 ~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~ 200 (302)
..+++..++.|++.+...+....++.|.+|++.|+++.|+.+....+|..++|.+++.+
T Consensus 339 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 339 TLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 66777888999999999999999999999999999999999999999999999998865
No 123
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.51 E-value=1.1e-12 Score=116.28 Aligned_cols=164 Identities=12% Similarity=0.056 Sum_probs=119.7
Q ss_pred HHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH-HHHHHHHHHHHHHhh-
Q 022133 60 SFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQ-LCALPMIIGASISAT- 137 (302)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~-~~~~~~~i~~~~~~~- 137 (302)
.+...........+.|.+.+++|++..+. +.+.+...++..++.++.|+++||+|||+.+. .+.+..+++.+....
T Consensus 231 ~~~~~~~~~~~~~~~p~~~~~~g~s~~~~--~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~ 308 (402)
T TIGR00897 231 RIINTIGLFGFAVFLPMFVAELGFSTSEW--LQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYI 308 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhHH--HHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 33333334445567788888888876665 77788888999999999999999999888764 333333333322221
Q ss_pred ----cchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHH
Q 022133 138 ----TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (302)
Q Consensus 138 ----~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~ 213 (302)
.++...+++..++.|++.+...+ ....+.|..| ++|+++.|+++....+|..++|.+++.+.+..| |...+++
T Consensus 309 ~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g-~~~~~~~ 385 (402)
T TIGR00897 309 PQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFG-AIGVVWI 385 (402)
T ss_pred HHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hHHHHHH
Confidence 24566666778888888776654 3456677655 589999999999999999999999999999888 7888888
Q ss_pred hHHHHHHHHHHhhcc
Q 022133 214 SIVPAAILCLAMVFC 228 (302)
Q Consensus 214 ~~~~~~~~~~~~~~~ 228 (302)
.+++.++..+...|+
T Consensus 386 ~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 386 FAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHHHHh
Confidence 777777766655554
No 124
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.51 E-value=1.2e-13 Score=124.52 Aligned_cols=158 Identities=16% Similarity=0.124 Sum_probs=134.6
Q ss_pred hhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 022133 67 LGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLL 146 (302)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 146 (302)
...++.+.+.+.++++.+.++. +|+.++......+..++.+.+.||+|.|.+.++|.++..++.++..++++.+.+++
T Consensus 62 ~~~~Gv~~~~~~~~f~~s~~~~--~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~l 139 (509)
T KOG2504|consen 62 INSFGLLFEELMDYFGSSSSQI--AWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYL 139 (509)
T ss_pred hheehhhHHHHHHHhCCCccHH--HHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 3345567788899999887774 89999999999999999999999999999999999999999999999999877666
Q ss_pred H-HHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHh
Q 022133 147 G-RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM 225 (302)
Q Consensus 147 ~-r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~ 225 (302)
. -++.|+|.|+.+....+++..+|+ +.|+.+.|+...+.++|.++-|.+...+.+..| ||..+++.+.+.+-.++..
T Consensus 140 t~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G-~r~~~l~~~~~~l~~~~~~ 217 (509)
T KOG2504|consen 140 TFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYG-WRGALLIFGGISLNVLVAG 217 (509)
T ss_pred HHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHH
Confidence 5 588999999999888888897775 559999999999999999999999999999999 8988887666655554444
Q ss_pred hcc
Q 022133 226 VFC 228 (302)
Q Consensus 226 ~~~ 228 (302)
..+
T Consensus 218 ~~~ 220 (509)
T KOG2504|consen 218 ALL 220 (509)
T ss_pred HHc
Confidence 433
No 125
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.50 E-value=6.6e-13 Score=118.52 Aligned_cols=177 Identities=16% Similarity=0.225 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhh----hhhHHHHHHHH-HHHH
Q 022133 54 LVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD----GVGRRRAFQLC-ALPM 128 (302)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d----~~Grr~~~~~~-~~~~ 128 (302)
+.++...+..++......++++.+.+++|.+.... +++..+..+..++.+++.|+++| |+|||+.++.+ .+..
T Consensus 7 i~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~--~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~ 84 (477)
T TIGR01301 7 LRVASVAAGVQFGWALQLSLLTPYVQELGIPHAWA--SIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALV 84 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHH
Confidence 34444444445555666677777888888865544 88899999999999999999999 59999998875 5556
Q ss_pred HHHHHHHhhcchhH-----------------HHHHHHHHHhhhhcchhhhHHHHhhhcCCCCcc--chhHhHHHHHHHHH
Q 022133 129 IIGASISATTRNLI-----------------GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVR--GTYGAFIQIATCLG 189 (302)
Q Consensus 129 ~i~~~~~~~~~~~~-----------------~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R--~~~~~~~~~~~~~g 189 (302)
+++..+++++++.. ..+++..+..++.....+...++++|.+|+++| +.+.++.+....+|
T Consensus 85 ~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG 164 (477)
T TIGR01301 85 AFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIG 164 (477)
T ss_pred HHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHH
Confidence 66666666655432 223333444557777778888999999999876 57888899999999
Q ss_pred HHHHHHHhhccc--cc--------C----cchHHHHHHhHHHHHHHH-HHhhccCCCh
Q 022133 190 LMGSLLIGIPVK--EI--------A----GWWRICFWVSIVPAAILC-LAMVFCAESP 232 (302)
Q Consensus 190 ~~~~~~~~~~~~--~~--------~----g~w~~~~~~~~~~~~~~~-~~~~~~pe~~ 232 (302)
..+++.+++... +. . ...+..|++.++..++.. +..++.+|.|
T Consensus 165 ~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 165 NVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 999999887641 11 0 136888988777666654 4556688865
No 126
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.49 E-value=3.3e-13 Score=122.90 Aligned_cols=143 Identities=16% Similarity=0.078 Sum_probs=108.1
Q ss_pred cchhhhhhh-hhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc--chhHHHHH
Q 022133 70 VNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT--RNLIGMLL 146 (302)
Q Consensus 70 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~--~~~~~~~~ 146 (302)
...++|.+. +++|++..+. +++.+...++.+++.++.|+++||+|||++++.+.++..+..+..... .+.+.+.+
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~--g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTV--ANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGL 371 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHH
Confidence 345677776 4778776655 899999999999999999999999999999888877666555443332 33333334
Q ss_pred HHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhH
Q 022133 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSI 215 (302)
Q Consensus 147 ~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~ 215 (302)
..++.++...+..+..+.++.|.+|++.|++++++++....+|..++|.+++.+.+..| |+..+...+
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g-~~~~~~~~~ 439 (496)
T PRK03893 372 LLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLD-LGTALASLS 439 (496)
T ss_pred HHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCC-hHHHHHHHH
Confidence 44444443333446677889999999999999999999889999999999999999888 777665443
No 127
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.49 E-value=1e-12 Score=115.71 Aligned_cols=153 Identities=13% Similarity=0.112 Sum_probs=119.4
Q ss_pred cchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 022133 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149 (302)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~ 149 (302)
...++|.+.++.|.+.+.. ++..+...++.++++++.|+++||+|+|+++..+..+.+++.+... . ........+
T Consensus 219 ~~~~lp~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~ 293 (381)
T PRK03633 219 LYGLMPLYLNHQGMSDASI--GFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALF 293 (381)
T ss_pred HHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHH
Confidence 3345677777777765544 7888888899999999999999999999999888877777655443 2 223344567
Q ss_pred HHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhhcc
Q 022133 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFC 228 (302)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~ 228 (302)
+.|++.+...|....++.|..|+++++...+.++....+|.+++|.+++.+.+..+ |++.|.+.+.+.++..+..+..
T Consensus 294 l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 294 ILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS-DNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHhc
Confidence 77777777788888889999999888888888888899999999999999998888 7888888777766665555443
No 128
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.49 E-value=1.6e-12 Score=116.60 Aligned_cols=178 Identities=16% Similarity=0.159 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHHhhhhccchhhhhh-hhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHH--HHHHHHHHHH
Q 022133 52 HVLVATLSSFLFGYHLGVVNEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRR--RAFQLCALPM 128 (302)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr--~~~~~~~~~~ 128 (302)
.+....++.++..-..+.+......+ .+++|++..+. ..+..+..+..++|++++|++.||+|.| ++++++.++.
T Consensus 282 ~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l--~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 282 QLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQL--IVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILW 359 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH
Confidence 34444455554443333444444444 44789887776 5677777888899999999999999999 8888888877
Q ss_pred HHHHHHHhh--------cchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcc
Q 022133 129 IIGASISAT--------TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (302)
Q Consensus 129 ~i~~~~~~~--------~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~ 200 (302)
.+.++...+ ..+.+.+.+.-++.|++.|..++..-++.+|+.|+.+.+...|++.+..-..+.+||++.+.+
T Consensus 360 ~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i 439 (477)
T PF11700_consen 360 IIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLI 439 (477)
T ss_pred HHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555554443 456777888899999999999999999999999999999999999999999999999999999
Q ss_pred cccCcchHHHHHHhHHHHHHHHHHhhccCCC
Q 022133 201 KEIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (302)
Q Consensus 201 ~~~~g~w~~~~~~~~~~~~~~~~~~~~~pe~ 231 (302)
.+..|.-|+.++...++.+++++++++++..
T Consensus 440 ~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 440 TDATGSQRYGFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHhhccch
Confidence 9888777888888778888888877777664
No 129
>PRK03545 putative arabinose transporter; Provisional
Probab=99.49 E-value=2.7e-12 Score=113.41 Aligned_cols=147 Identities=13% Similarity=0.070 Sum_probs=114.3
Q ss_pred hhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH-HHhhcchhHHHHHHHHHHhhh
Q 022133 76 SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS-ISATTRNLIGMLLGRFVVGTG 154 (302)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~r~~~g~~ 154 (302)
.+.+..|.+.++. +++.+...++.++++++.|+++||+|||.... +..+..++.. .....++...++++.++.|++
T Consensus 231 ~l~~~~g~s~~~~--~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~ 307 (390)
T PRK03545 231 FVQQVAGLSENFA--TLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWGIA 307 (390)
T ss_pred HHHHhcCCCccHH--HHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 3444467776655 78888899999999999999999999887544 4444333333 334556777777888889998
Q ss_pred hcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhhc
Q 022133 155 MGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVF 227 (302)
Q Consensus 155 ~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~ 227 (302)
.+...+.....+.+..| +.|++++++++....+|..+||++++.+.+..| ++..|++.+++.+++++....
T Consensus 308 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g-~~~~~~~~~~~~~~~~~~~~~ 378 (390)
T PRK03545 308 IMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLG-LSSIGYVGAALALAALVWSIL 378 (390)
T ss_pred HhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhHHHHHHHHHHHHHHHHHHH
Confidence 87776777788888877 588999999999999999999999999999988 899998887777776555443
No 130
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.47 E-value=8.7e-13 Score=116.68 Aligned_cols=142 Identities=20% Similarity=0.177 Sum_probs=110.1
Q ss_pred cchhhhhh-hhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH-HHhhcchhHHHHHH
Q 022133 70 VNEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS-ISATTRNLIGMLLG 147 (302)
Q Consensus 70 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~ 147 (302)
...+.|.+ .+++|++..+. +++.+...++.+++.++.|+++||+|||+.+.++.++.++... .....++.+.+.+.
T Consensus 257 ~~~~~~~~~~~~~g~s~~~~--~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (405)
T TIGR00891 257 IQDLLPTYLKADLGLSPHTV--ANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLG 334 (405)
T ss_pred hhhhhHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHH
Confidence 33444544 45567766555 7888999999999999999999999999998888776533332 33344555666666
Q ss_pred HHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHH
Q 022133 148 RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (302)
Q Consensus 148 r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~ 213 (302)
.++.|++.+...+....++.|.+|++.|++++|+.+....+|..++|.+++.+.+..|.|+..+..
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 335 LFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 677777777777788889999999999999999999999999999999999999887755555443
No 131
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.47 E-value=2.4e-13 Score=113.77 Aligned_cols=132 Identities=20% Similarity=0.115 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccch
Q 022133 98 LGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGT 177 (302)
Q Consensus 98 ~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~ 177 (302)
.+...-|.++.+++.||+|||+.|..+.++.++..++...+.+.....+..+..-++..+.+.+.++|..|++|+..|++
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhc
Confidence 34556899999999999999999999999999988877766554444444455555556667788999999999999999
Q ss_pred hHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhhccCCC
Q 022133 178 YGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (302)
Q Consensus 178 ~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~pe~ 231 (302)
+.|..+....+|+++.|+++ ...+... .-..+.+++++.+.++...++--||
T Consensus 471 gvGtcSsmaRIggI~~p~iA-~~~e~s~-sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIA-MRAELST-SLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred chhhhhhHHhhhhhhhhHHH-HHhccce-eehHHHHHHHHHHHHHHheeeeecc
Confidence 99999999999999999999 3333322 2344444444444444444444466
No 132
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.46 E-value=4.4e-12 Score=111.68 Aligned_cols=186 Identities=21% Similarity=0.234 Sum_probs=143.4
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhH-HHHHHHH
Q 022133 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGR-RRAFQLC 124 (302)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Gr-r~~~~~~ 124 (302)
.+..|+.+.+..+..++...+..++.+..-.+.++++.+.+...-|+++++..+|.+++++.+|+.+.|.|. |+.++.|
T Consensus 29 ~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s 108 (488)
T KOG2325|consen 29 RKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVS 108 (488)
T ss_pred cCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHH
Confidence 345567788888888888888888777776777775555444455999999999999999999999999986 7788999
Q ss_pred HHHHHHHHHHH-hh---cc-hhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhc
Q 022133 125 ALPMIIGASIS-AT---TR-NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIP 199 (302)
Q Consensus 125 ~~~~~i~~~~~-~~---~~-~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~ 199 (302)
.++.++++++. .+ .+ ....++++|++.|+|.|.. ...-.|+++-...++|.++++..+.+..+|..+||.++..
T Consensus 109 ~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~ 187 (488)
T KOG2325|consen 109 FLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLA 187 (488)
T ss_pred HHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHH
Confidence 99999999887 32 23 5678899999999998876 5778999999999999999999888888888888877766
Q ss_pred ccccC--c----------chHHHHHHhHHHHHHHHHH-hhccCCCh
Q 022133 200 VKEIA--G----------WWRICFWVSIVPAAILCLA-MVFCAESP 232 (302)
Q Consensus 200 ~~~~~--g----------~w~~~~~~~~~~~~~~~~~-~~~~pe~~ 232 (302)
+.... | .+..+-|+.++..++.++. .+++.|.+
T Consensus 188 f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~ 233 (488)
T KOG2325|consen 188 FTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVY 233 (488)
T ss_pred HhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecc
Confidence 54321 1 1345666776666665544 45567753
No 133
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.46 E-value=4.5e-12 Score=115.86 Aligned_cols=233 Identities=17% Similarity=0.068 Sum_probs=140.8
Q ss_pred CcchhhhhhhhcccCCCCCC-CCccchhhhhhhhcCc----cccc-cCCCCcchhHHHHH-HHHHHHHHHHhhhhccchh
Q 022133 1 MWGRQREASMMYKRTSSRDR-SSTFDVEETTALVQNG----TEVE-NTNPSWKLSFPHVL-VATLSSFLFGYHLGVVNEP 73 (302)
Q Consensus 1 ~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 73 (302)
++||.+||+..+.++.+..+ +...+.++.......+ ..+. ..+...+...+... .+.+..+.+....+....|
T Consensus 238 ~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y 317 (513)
T KOG0254|consen 238 EKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYY 317 (513)
T ss_pred HcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEee
Confidence 37899999999999988332 1121211111010000 0000 00001122333333 3444444444555677888
Q ss_pred hhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcch-------------
Q 022133 74 LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRN------------- 140 (302)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~------------- 140 (302)
.+.+.+..|.+.+.. +...+..+...++..++.++.||+|||+.++.+.+.+.++.++++....
T Consensus 318 ~~~if~~~g~~~~~~---~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (513)
T KOG0254|consen 318 STTIFKSAGLKSDTF---LASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAG 394 (513)
T ss_pred hHHHHHhcCCCCchH---HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchh
Confidence 888888888776542 4556666677788888899999999999999999999999887764211
Q ss_pred hHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchH-HHHHHhHHHHH
Q 022133 141 LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR-ICFWVSIVPAA 219 (302)
Q Consensus 141 ~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~-~~~~~~~~~~~ 219 (302)
+..+....+.......+..++.+.+.+|.+|.+.|+++.++......+..++-...........+ +. ..+++.++..+
T Consensus 395 ~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~-~~~~f~~f~~~~~~ 473 (513)
T KOG0254|consen 395 WLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALG-IGGTFGYFGGICLL 473 (513)
T ss_pred HHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchHHHHHHHHHH
Confidence 11222222222333333446777899999999999999999777766665555444444443332 12 33334444444
Q ss_pred HHH-HHhhccCCChHHHHHhCCHHH
Q 022133 220 ILC-LAMVFCAESPHWLYKKGRTAE 243 (302)
Q Consensus 220 ~~~-~~~~~~pe~~~~~~~~~~~~~ 243 (302)
... ..++++||| ++++.|
T Consensus 474 ~~~~fv~~~~pET------kg~sle 492 (513)
T KOG0254|consen 474 SLIIFVFFFVPET------KGLTLE 492 (513)
T ss_pred HHHHHheEEcccC------CCCcHH
Confidence 455 577889999 888777
No 134
>PRK15075 citrate-proton symporter; Provisional
Probab=99.45 E-value=5.2e-12 Score=113.17 Aligned_cols=140 Identities=18% Similarity=0.101 Sum_probs=99.1
Q ss_pred Hhhhhccchhhhhhhhh-cccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH-HH---hhc
Q 022133 64 GYHLGVVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS-IS---ATT 138 (302)
Q Consensus 64 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~-~~---~~~ 138 (302)
......+..+.|.+.++ .|++.++. ++......++..++.+++|+++||+|||+.++.+..+.++... .. ...
T Consensus 251 ~~~~~~~~~~~p~~l~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 328 (434)
T PRK15075 251 TVSFYLITVYTPTFGKTVLHLSAADS--LLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAA 328 (434)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33344456667777655 68776554 6777788888999999999999999999998876554433221 11 112
Q ss_pred chhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHH-HHHHHHHHHHHHHHhhcccccCc
Q 022133 139 RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFI-QIATCLGLMGSLLIGIPVKEIAG 205 (302)
Q Consensus 139 ~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~g 205 (302)
++...+.+..++.+++.+...+....++.|.+|++.|+++.++. +.+..+++.++|.+.+.+.+..|
T Consensus 329 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 329 PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 33433444455566667766666778899999999999999985 55555567788999998888766
No 135
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.45 E-value=4.5e-12 Score=114.18 Aligned_cols=170 Identities=16% Similarity=0.127 Sum_probs=110.0
Q ss_pred HHHHHHHHHHhhhhccchhhhhhhhh-cccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhh--hHHHHH-HHHHHHHHH
Q 022133 55 VATLSSFLFGYHLGVVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV--GRRRAF-QLCALPMII 130 (302)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~--Grr~~~-~~~~~~~~i 130 (302)
...+..++..........++|.+.++ .|++.++. ++....+.++.+++.++.|+++||+ |||... +....+..+
T Consensus 257 ~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~--~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~ 334 (452)
T PRK11273 257 YIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKS--SWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTI 334 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHH
Confidence 33344333333334455677776655 67776554 6778888888999999999999999 555432 222233333
Q ss_pred HHHHHhh--cchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHH-HHHHHhhcccccCcch
Q 022133 131 GASISAT--TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLM-GSLLIGIPVKEIAGWW 207 (302)
Q Consensus 131 ~~~~~~~--~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~g~w 207 (302)
+.+.+.+ ..+.....+..++.|.+..........+..|.+|++.||++.|+.+....+|+. .+|.+.+.+.+..| |
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g-~ 413 (452)
T PRK11273 335 ATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-W 413 (452)
T ss_pred HHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc-c
Confidence 3322222 234444444445555543333333445678999999999999999887777755 57999999988888 8
Q ss_pred HHHHHHhHHHHHHHHHHhhc
Q 022133 208 RICFWVSIVPAAILCLAMVF 227 (302)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~ 227 (302)
+..|++.+..++++++...+
T Consensus 414 ~~~f~~~~~~~~~~~~~~~~ 433 (452)
T PRK11273 414 DGGFMVMIGGSILAVILLIV 433 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 99988777666666555443
No 136
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.45 E-value=5.5e-12 Score=112.94 Aligned_cols=159 Identities=13% Similarity=0.085 Sum_probs=99.7
Q ss_pred ccchhhhhhh-hhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh--h--cchhHH
Q 022133 69 VVNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA--T--TRNLIG 143 (302)
Q Consensus 69 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~--~--~~~~~~ 143 (302)
....++|.+. +++|.+.++. +...++..++..+++++.|+++||+|||+.++++.++.++...... . ..+...
T Consensus 261 ~~~~~lp~~l~~~~g~s~~~~--~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (432)
T PRK10406 261 TFTTYMQKYLVNTAGMHANVA--SGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYA 338 (432)
T ss_pred HHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 3455667655 4567765444 6777777777888999999999999999988776655433332111 1 222222
Q ss_pred HHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHH-HHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHH
Q 022133 144 MLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQI-ATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILC 222 (302)
Q Consensus 144 ~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~ 222 (302)
.+..-.+.+++.+...+....+++|++|++.|++++|+.+. +..+++..+|.+.+.+. ..|.|...+++.++..+++.
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~-~~g~~~~~~~~~~~~~~i~~ 417 (432)
T PRK10406 339 AFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLK-SIGMETAFFWYVTLMAVVAF 417 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHH-HhCCCcHHHHHHHHHHHHHH
Confidence 22222223333334445567889999999999999999654 44444445777777553 34546666666666666666
Q ss_pred HHhhccCC
Q 022133 223 LAMVFCAE 230 (302)
Q Consensus 223 ~~~~~~pe 230 (302)
+..+++++
T Consensus 418 ~~~~~l~~ 425 (432)
T PRK10406 418 LVSLMLHR 425 (432)
T ss_pred HHHHHhhh
Confidence 65555443
No 137
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.44 E-value=7.6e-12 Score=111.44 Aligned_cols=165 Identities=17% Similarity=0.146 Sum_probs=111.7
Q ss_pred HHHHHHHhhhhccchhhh-hhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhH-HHHHHHHHHHHHHHHHHH
Q 022133 58 LSSFLFGYHLGVVNEPLE-SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGR-RRAFQLCALPMIIGASIS 135 (302)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Gr-r~~~~~~~~~~~i~~~~~ 135 (302)
+..+......+...++++ .+.++.|++..+. |++.+++.++..++++++|.++||+|| |+++.++.++..++..+.
T Consensus 9 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~i--Gl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~ 86 (418)
T TIGR00889 9 FMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEI--GWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFA 86 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 344444445555544444 4556678877665 999999999999999999999999965 888888888888888888
Q ss_pred hhcchhHHHHHHHHHHhhhhcchhhhHHHHh----h----hcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcch
Q 022133 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYV----T----EVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWW 207 (302)
Q Consensus 136 ~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~----~----e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w 207 (302)
.+.++++.+++.|++.|++.+...+...+.. . |......|.+..| .+|.+++|.+++.+....+ |
T Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~-~ 159 (418)
T TIGR00889 87 AQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELS-N 159 (418)
T ss_pred HHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccch-h
Confidence 8888899889999999998776665544432 1 2222223334333 3577777777776633222 4
Q ss_pred HHHHHHhHHHHHHHHHHhhccCCCh
Q 022133 208 RICFWVSIVPAAILCLAMVFCAESP 232 (302)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~pe~~ 232 (302)
. .|++.++..++.++..+++||+|
T Consensus 160 ~-~f~~~~~~~~~~~~~~~~~~e~~ 183 (418)
T TIGR00889 160 I-QLYITAGSSALLGVFALTLPDIP 183 (418)
T ss_pred H-HHHHHHHHHHHHHHHHhcCCCCC
Confidence 4 34455555555555566788864
No 138
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.44 E-value=5.6e-12 Score=112.58 Aligned_cols=137 Identities=15% Similarity=0.095 Sum_probs=99.5
Q ss_pred cchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 022133 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149 (302)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~ 149 (302)
+..++|.+.++.|.+.+.. +...+...++..++.++.|+++||+|||+.+..+.++.++..+.....++.....+..+
T Consensus 250 ~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGVV--SNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGAC 327 (426)
T ss_pred HHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHH
Confidence 3446677777777665544 77788888899999999999999999999998888776665554433222111222222
Q ss_pred HHhh--hhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHH
Q 022133 150 VVGT--GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (302)
Q Consensus 150 ~~g~--~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~ 209 (302)
+.|+ +..+..+..+.++.|.+|++.||+++|+......+|..++|.+.+.+.+..| +..
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g-~~~ 388 (426)
T PRK12307 328 LFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMG-LGA 388 (426)
T ss_pred HHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHccc-HHH
Confidence 3333 2233345666788999999999999999988889999999999999988877 444
No 139
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.44 E-value=1.3e-12 Score=117.15 Aligned_cols=162 Identities=19% Similarity=0.200 Sum_probs=115.4
Q ss_pred hhccchhhh-hhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhh----hhH-HHHHHHHHHHHHHHHHHHhhcch
Q 022133 67 LGVVNEPLE-SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGR-RRAFQLCALPMIIGASISATTRN 140 (302)
Q Consensus 67 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~----~Gr-r~~~~~~~~~~~i~~~~~~~~~~ 140 (302)
.+.+..+++ .+.+++|++.... |++.++..+..++..|+.|+++|| +|| |+.++.+.+..+++.+++...++
T Consensus 15 ~~~~~~~l~~~~~~~~g~s~~~~--g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~ 92 (437)
T TIGR00792 15 FAIVSTYLLFFYTDVLGLSAAFV--GTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPD 92 (437)
T ss_pred HHHHHHHHHHHHHHccCCCHHHH--HHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCC
Confidence 334444444 4555678776655 999999999999999999999998 677 45667777777777776665543
Q ss_pred ------hHHHHHHHHHHhhhhcchhhhHHHHhhhcC-CCCccchhHhHHHHHHHHHHHHHHHHhhccc-------ccCcc
Q 022133 141 ------LIGMLLGRFVVGTGMGLGPTVAALYVTEVS-PPFVRGTYGAFIQIATCLGLMGSLLIGIPVK-------EIAGW 206 (302)
Q Consensus 141 ------~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~-p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~-------~~~g~ 206 (302)
...+++.+++.+++.+.......++..|+. ++++|++..++.+.+..+|..+++.+.+.+. +..+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g- 171 (437)
T TIGR00792 93 FSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFG- 171 (437)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc-
Confidence 345566778888888877667778888987 5689999999988888888766655544333 1234
Q ss_pred hHHHHHHhHHHHHHHHH-HhhccCCC
Q 022133 207 WRICFWVSIVPAAILCL-AMVFCAES 231 (302)
Q Consensus 207 w~~~~~~~~~~~~~~~~-~~~~~pe~ 231 (302)
|++.+++.++++++..+ ..++.+|+
T Consensus 172 ~~~~~~i~~~l~~~~~~~~~~~~~e~ 197 (437)
T TIGR00792 172 WFMFALVLALIGVVSLIICFFGTKER 197 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCEec
Confidence 89988877766665544 44556665
No 140
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.42 E-value=1.1e-11 Score=111.15 Aligned_cols=116 Identities=19% Similarity=0.134 Sum_probs=96.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc-chhHHHHHHHHHHhhhhcchhhhHHHHhhh
Q 022133 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT-RNLIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (302)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e 168 (302)
.+++.+...++.+++.+++++++||+|+|+.+..+.++.+++.+...+. .+...+++..++.|++.+...+...++++|
T Consensus 259 ~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 338 (437)
T TIGR00792 259 FSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVAD 338 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3677777888999999999999999999999999988888777766554 355666777888899999888888999998
Q ss_pred cCC-------CCccchhHhHHHHHHHHHHHHHHHHhhcccccCc
Q 022133 169 VSP-------PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (302)
Q Consensus 169 ~~p-------~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 205 (302)
..+ ++.+|...|+++.+..+|..+++.+.+.+.+..|
T Consensus 339 ~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 339 TVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred hhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 865 5667899999999999999999999888765444
No 141
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.42 E-value=5.7e-12 Score=114.11 Aligned_cols=154 Identities=12% Similarity=0.004 Sum_probs=104.5
Q ss_pred chhhhhh-hhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHH-------HHHHHHHHHHHHHHHHHhhcchhH
Q 022133 71 NEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRR-------RAFQLCALPMIIGASISATTRNLI 142 (302)
Q Consensus 71 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr-------~~~~~~~~~~~i~~~~~~~~~~~~ 142 (302)
..++|.+ .+++|++.... +.+.+++.++.+++.+++|+++||+||| ..+.+..++.++..++.....+..
T Consensus 272 ~~~~p~~l~~~~g~s~~~a--~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~ 349 (476)
T PLN00028 272 DNIIAEYFYDRFGLSLETA--GAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLG 349 (476)
T ss_pred HhHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHH
Confidence 3345544 45568776555 7888899999999999999999999976 233333333333344444455555
Q ss_pred HHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHH
Q 022133 143 GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILC 222 (302)
Q Consensus 143 ~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~ 222 (302)
..++..++.+++.+...+....++.++.| +.||...|+.+.+..+|+.+++.+.+ .....+ |+..|++.+++.+++.
T Consensus 350 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~-y~~~f~~~~~~~~i~~ 426 (476)
T PLN00028 350 AAIVVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYS-TETGISLMGVMIIACT 426 (476)
T ss_pred HHHHHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCcc-HhhHHHHHHHHHHHHH
Confidence 55555566666666565666667777654 68999999988877888888777654 112233 8888888877777777
Q ss_pred HHhhccC
Q 022133 223 LAMVFCA 229 (302)
Q Consensus 223 ~~~~~~p 229 (302)
++.++++
T Consensus 427 ~~~~~~~ 433 (476)
T PLN00028 427 LPVAFIH 433 (476)
T ss_pred HHHHhee
Confidence 7766665
No 142
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.42 E-value=1.3e-11 Score=108.96 Aligned_cols=175 Identities=14% Similarity=0.063 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHH--HHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHHH-
Q 022133 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLV--VSMCLGGAFIGSTLS-GWIADGVGRRRAFQLCALPM- 128 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~-g~l~d~~Grr~~~~~~~~~~- 128 (302)
...+...++.++...+...+++|.+.++.|.+.++. |.. .+...+...+.++++ ++.+||+|||+..++...+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~i--Gl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTAL--AFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHH
Confidence 345566678888888889999999999999887766 775 355667777777777 55799999999876665332
Q ss_pred HHHHHHHh---hcch-hHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccC
Q 022133 129 IIGASISA---TTRN-LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (302)
Q Consensus 129 ~i~~~~~~---~~~~-~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 204 (302)
++.....+ ...+ ...++...++.++..+...+....+..|..+.+.++...+....+..+|.++++...+.+.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~ 160 (390)
T TIGR02718 81 SACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKF 160 (390)
T ss_pred HHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22222222 1222 2233444455556666667777778889998888888888888888999999998888888888
Q ss_pred cchHHHHHHhHHHHHHHHHHhhccCC
Q 022133 205 GWWRICFWVSIVPAAILCLAMVFCAE 230 (302)
Q Consensus 205 g~w~~~~~~~~~~~~~~~~~~~~~pe 230 (302)
| ||..|++.++..++..+..++++|
T Consensus 161 g-w~~~f~~~a~l~~~~~~~~~~~~~ 185 (390)
T TIGR02718 161 G-QRPAFLLVACVPLASLVCVLWLKD 185 (390)
T ss_pred C-HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8 999999887777665555555544
No 143
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.41 E-value=7.7e-12 Score=112.04 Aligned_cols=168 Identities=22% Similarity=0.184 Sum_probs=109.6
Q ss_pred HHHHHHHHHhhhhccchhhhhhh-hhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhh--h-HHHHHHHHHHHHHHH
Q 022133 56 ATLSSFLFGYHLGVVNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV--G-RRRAFQLCALPMIIG 131 (302)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~--G-rr~~~~~~~~~~~i~ 131 (302)
+.+..+........+..++|.+. +++|++..+. +...+.+.++..++.++.|+++||+ + ||.......+...+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a--~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~ 325 (434)
T PRK11663 248 LSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTA--NSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLS 325 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHH--HHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHH
Confidence 33333333333444555677666 5568776655 7888889999999999999999999 3 333322222111111
Q ss_pred HH--HHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHH
Q 022133 132 AS--ISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (302)
Q Consensus 132 ~~--~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~ 209 (302)
.. ......+...+.+..+..|++..........++.|.+|++.|++++|+.+....+|..++|.+.+.+.+..| |+.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g-~~~ 404 (434)
T PRK11663 326 VGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWH-WTG 404 (434)
T ss_pred HHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcc-cHH
Confidence 11 111122333333334444543332233345677899999999999999999999999999999999998888 899
Q ss_pred HHHHhHHHHHHHHHHhh
Q 022133 210 CFWVSIVPAAILCLAMV 226 (302)
Q Consensus 210 ~~~~~~~~~~~~~~~~~ 226 (302)
.|++.++++++..+..+
T Consensus 405 ~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 405 FFVVISIAAGISALLLL 421 (434)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99887777666555443
No 144
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.41 E-value=8e-12 Score=113.33 Aligned_cols=165 Identities=18% Similarity=0.134 Sum_probs=128.4
Q ss_pred HHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhh----
Q 022133 62 LFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT---- 137 (302)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~---- 137 (302)
+..++..+.....+.+..+ .+.+....+++..+..+...+..+++|.++||+.||++++.+.++.++..+..++
T Consensus 21 iS~lG~~~~~va~~wlv~~--lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~ 98 (524)
T PF05977_consen 21 ISNLGDWMQTVALAWLVTQ--LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFF 98 (524)
T ss_pred HHHHHHHHHHHHHHHHHHH--HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333333333444444443 3456666689999999999999999999999999999999998877655443332
Q ss_pred -cchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHH
Q 022133 138 -TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIV 216 (302)
Q Consensus 138 -~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~ 216 (302)
..+.+.+++.-++.|++.+...|...+++.|+.|+++...+.++.++..++..++||.++|.+....| -.+.|++.++
T Consensus 99 ~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G-~~~~f~inal 177 (524)
T PF05977_consen 99 GLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFG-AAAAFLINAL 177 (524)
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHH-HHHHHHHHHH
Confidence 24678888899999999999999999999999999999999999999999999999999999988777 4777877666
Q ss_pred HHHHHHHHhhccC
Q 022133 217 PAAILCLAMVFCA 229 (302)
Q Consensus 217 ~~~~~~~~~~~~p 229 (302)
..++.++.....+
T Consensus 178 sfl~~i~~l~~~~ 190 (524)
T PF05977_consen 178 SFLISILALLRWK 190 (524)
T ss_pred HHHHHHHHHHHcc
Confidence 6555544444443
No 145
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.39 E-value=2.1e-11 Score=107.36 Aligned_cols=150 Identities=13% Similarity=0.063 Sum_probs=118.6
Q ss_pred cchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 022133 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149 (302)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~ 149 (302)
...+.+.+.++.|.+.... |.+.+...++..+..++.+++.||+|+|+.+..+.++.++..+..+..++.+.+++..+
T Consensus 224 ~~~~~~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (382)
T PRK11128 224 YYGFSAIYWQAAGYSASTI--GYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQI 301 (382)
T ss_pred HHHHHHHHHHHCCCCHhHH--HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 3345555667778775554 78888888888999999999999999999999999888888777778888888888999
Q ss_pred HHhhhhcchhhhHHHHhhhcCCCCccchhHhHHH-HHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHH
Q 022133 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQ-IATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA 224 (302)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~ 224 (302)
+.|++.+...+....++.+. +++++++..++++ ....+|..++|.++|.+.+..+ + ..++..+++.+.+++.
T Consensus 302 l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g-~-~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 302 LHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG-A-GVFWVMALVALPALFI 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHHHHH
Confidence 99999998888888888887 5566788888875 5667888999999999999887 4 4555555555544443
No 146
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.39 E-value=3.7e-11 Score=100.83 Aligned_cols=160 Identities=19% Similarity=0.221 Sum_probs=143.0
Q ss_pred hhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHH
Q 022133 65 YHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGM 144 (302)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 144 (302)
-....+.+.++.+.+++|.+.+.. |+++++..+...+.+++..+++.|+|.++.+..++++.+++.++-... +...+
T Consensus 26 ~~itsvgPLL~~Ir~~~gls~s~a--GlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L 102 (395)
T COG2807 26 PAITSVGPLLDEIRQDLGLSFSVA--GLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLL 102 (395)
T ss_pred hhhhhhhhhHHHHHHHhcccHHHH--HHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHH
Confidence 334568889999999999987776 999999999999999999999999999999999999999999988877 67778
Q ss_pred HHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHH
Q 022133 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA 224 (302)
Q Consensus 145 ~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~ 224 (302)
+.+-.+.|++.+......+..+-+.||++ -+..+++|.....+|..+++.+...+.++.++||....+-+.+++++++.
T Consensus 103 ~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~ 181 (395)
T COG2807 103 FLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLI 181 (395)
T ss_pred HHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999866 68999999999999999999999988887755999998888888888877
Q ss_pred hhcc
Q 022133 225 MVFC 228 (302)
Q Consensus 225 ~~~~ 228 (302)
++.-
T Consensus 182 WlPq 185 (395)
T COG2807 182 WLPQ 185 (395)
T ss_pred Hhhh
Confidence 7653
No 147
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.39 E-value=7.8e-12 Score=112.91 Aligned_cols=175 Identities=15% Similarity=0.173 Sum_probs=152.1
Q ss_pred HHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhh--HHHHHHHHHHHHHH
Q 022133 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG--RRRAFQLCALPMII 130 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~G--rr~~~~~~~~~~~i 130 (302)
.+...+...+......+...++|.+.++.+++.++. +.+.++..+..+++.++.|+++|+.. ++.+..++.++.++
T Consensus 300 fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~a--a~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl 377 (509)
T KOG2504|consen 300 FLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDA--AFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGL 377 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhh--HHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHH
Confidence 444555555556666667778888888888877766 79999999999999999999999988 66667788888888
Q ss_pred HHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHH
Q 022133 131 GASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRIC 210 (302)
Q Consensus 131 ~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~ 210 (302)
+.+.+++.++++.+++..++.|++.|.........+.|+.+.+.-..+.|+...+.+++.++||.+++.+.+..+.|...
T Consensus 378 ~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~ 457 (509)
T KOG2504|consen 378 ARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHA 457 (509)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeee
Confidence 88888999999999999999999999998888889999999999999999999999999999999999999988888999
Q ss_pred HHHhHHHHHHHHHHhhccC
Q 022133 211 FWVSIVPAAILCLAMVFCA 229 (302)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~p 229 (302)
|++.+++.+++.+.+++.|
T Consensus 458 f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 458 FYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred hhhcChHHHHHHHHHHHhH
Confidence 9998888888887777766
No 148
>PRK10504 putative transporter; Provisional
Probab=99.38 E-value=1.2e-11 Score=111.91 Aligned_cols=144 Identities=13% Similarity=0.055 Sum_probs=108.2
Q ss_pred HHHHHhhhhccchhhhhhhhh-cccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc
Q 022133 60 SFLFGYHLGVVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT 138 (302)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~ 138 (302)
.++..........+.|.+.+. .|.+.. ..++......++..++.++.++++||+|||+++..+..+.+++..+..+.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~ 347 (471)
T PRK10504 270 SFAGRIGSGMLPFMTPVFLQIGLGFSPF--HAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLV 347 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhc
Confidence 333333334444556666553 555443 44788888888888888999999999999999998888777776655543
Q ss_pred ---chhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCc
Q 022133 139 ---RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (302)
Q Consensus 139 ---~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 205 (302)
.+...+.+..++.|++.+...+....++.+..|++.|+.+.++.+....+|..+|+.+++.+.+..+
T Consensus 348 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 348 ALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFG 417 (471)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3333344556778888888888888999999999999999999999999999999998887765443
No 149
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.38 E-value=1.1e-11 Score=109.65 Aligned_cols=133 Identities=13% Similarity=0.045 Sum_probs=112.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhc
Q 022133 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEV 169 (302)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~ 169 (302)
.|...++..++.+++.++.|++.||+|||+.+.++.++.++...+....++.+.+++.+++.|++.+........+..+.
T Consensus 256 ~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 335 (396)
T TIGR00882 256 FGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQ 335 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 37788888888889999999999999999999999888888777777788888888889999998777666667788888
Q ss_pred CCCCccchhHhH-HHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHH
Q 022133 170 SPPFVRGTYGAF-IQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCL 223 (302)
Q Consensus 170 ~p~~~R~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~ 223 (302)
.|++.+++..+. ++....+|..+++.+++++.+..| |+..|.+.++..++..+
T Consensus 336 ~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G-~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 336 FDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIG-FQGAYLVLGCIVLLFTL 389 (396)
T ss_pred CCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcc-cHHHHHHHHHHHHHHHH
Confidence 999999888776 678899999999999999999888 88988887666655443
No 150
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.37 E-value=1e-11 Score=110.48 Aligned_cols=162 Identities=17% Similarity=0.097 Sum_probs=106.7
Q ss_pred HHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHH-HHHHHHHHHHHHHH
Q 022133 56 ATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRA-FQLCALPMIIGASI 134 (302)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~-~~~~~~~~~i~~~~ 134 (302)
..+..++.......+..++|.+.++++.+.+....+...+...++..++.++.|+++||+|||+. ++...++.+++..+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~ 326 (412)
T TIGR02332 247 YTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLL 326 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHH
Confidence 33444444444555667888888875433333344788899999999999999999999997664 33343344333322
Q ss_pred HhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHh
Q 022133 135 SATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS 214 (302)
Q Consensus 135 ~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~ 214 (302)
.....+....+++-++.+++.....+.......|.+|+++|++++|+.+....+|.+++|.+.+.+.+..|.|+..+++.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~ 406 (412)
T TIGR02332 327 ASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFV 406 (412)
T ss_pred HHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHH
Confidence 22222222222222233333333333444556788999999999999999999999999999999988876688888765
Q ss_pred HHH
Q 022133 215 IVP 217 (302)
Q Consensus 215 ~~~ 217 (302)
++.
T Consensus 407 ~~~ 409 (412)
T TIGR02332 407 AAL 409 (412)
T ss_pred HHH
Confidence 543
No 151
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.37 E-value=8.9e-12 Score=108.52 Aligned_cols=131 Identities=15% Similarity=0.128 Sum_probs=112.2
Q ss_pred hhhhhhhhh-cccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcch-hHHHHHHHH
Q 022133 72 EPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRN-LIGMLLGRF 149 (302)
Q Consensus 72 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~r~ 149 (302)
...|.+.++ +|.+..+. +++.+...++..++.++.+++.||+|||+.+..+..+.+++.....+.++ .+.+++..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHY--GWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWF 309 (365)
T ss_pred HHhHHHHHHHhCCchHHH--HHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHH
Confidence 456666654 67665544 88889999999999999999999999999998888777777777776664 777788899
Q ss_pred HHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccC
Q 022133 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (302)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 204 (302)
+.|++.+...+....++.|.+|+++|++..++++....+|..++|.+++.+.+..
T Consensus 310 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 310 AIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999999999887653
No 152
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.36 E-value=4.1e-11 Score=108.91 Aligned_cols=154 Identities=18% Similarity=0.234 Sum_probs=115.1
Q ss_pred hhhhhhcccCCcchhhHHHHH-HHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHH---hhc-chhHHHHHHHH
Q 022133 75 ESISLDLGFNGNTLAEGLVVS-MCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS---ATT-RNLIGMLLGRF 149 (302)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~---~~~-~~~~~~~~~r~ 149 (302)
|.+.++.|++.++. +++.. ...++.+++.+++|+++||+|+|+.+.++.++.++..+.+ +.. ++...+.+..+
T Consensus 247 ~~l~~~~G~s~~~~--g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~ 324 (491)
T PRK11010 247 TFLIRGVGFDAGEV--GLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVF 324 (491)
T ss_pred HHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 33445678776655 77764 5567889999999999999999988877666555444322 232 34444444556
Q ss_pred HHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhhccC
Q 022133 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCA 229 (302)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~p 229 (302)
+..++.|...+...++..++.+++.+++..++.+....+|..+++.+.|.+.+..| |+..|.+.+++++.+++...+++
T Consensus 325 l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G-~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 325 FENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHG-WPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 65555566666778889999999999999999999999998888888999988888 89999988888888777766665
Q ss_pred CC
Q 022133 230 ES 231 (302)
Q Consensus 230 e~ 231 (302)
++
T Consensus 404 ~~ 405 (491)
T PRK11010 404 QT 405 (491)
T ss_pred hc
Confidence 43
No 153
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.35 E-value=4.6e-11 Score=105.55 Aligned_cols=150 Identities=15% Similarity=0.009 Sum_probs=110.1
Q ss_pred hhhhhhhhhcccCCcchhhHHHHHHHH-HHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh-h-----cchhHHH
Q 022133 72 EPLESISLDLGFNGNTLAEGLVVSMCL-GGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA-T-----TRNLIGM 144 (302)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~-~-----~~~~~~~ 144 (302)
.+.+.+.+|.|++.++. |++..... ....++.++.|++.||+|+|+.+..+..+.++..+... . .++...+
T Consensus 229 ~~~~~~l~~~G~s~~~i--g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (390)
T TIGR02718 229 GLSKLYLVDAGWPLEWI--GRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVA 306 (390)
T ss_pred HHhhHHHHhcCCCHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHH
Confidence 34556667788877665 77777665 45667889999999999999999887766533322221 1 1233334
Q ss_pred HHHHHHHhhhhcchhhhHHHHhhhcCCC-CccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHH
Q 022133 145 LLGRFVVGTGMGLGPTVAALYVTEVSPP-FVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCL 223 (302)
Q Consensus 145 ~~~r~~~g~~~~~~~~~~~~~~~e~~p~-~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~ 223 (302)
.....+.+++.+...+.....+.+..++ +.+++.+++.+....+|..++|.+++.+.+..| ++..|++.+++.+++++
T Consensus 307 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G-~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 307 WSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFG-YAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHH
Confidence 4445566677777777777777777776 889999999999999999999999999998877 78888887766666544
Q ss_pred H
Q 022133 224 A 224 (302)
Q Consensus 224 ~ 224 (302)
.
T Consensus 386 ~ 386 (390)
T TIGR02718 386 L 386 (390)
T ss_pred H
Confidence 3
No 154
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.34 E-value=1.5e-11 Score=105.18 Aligned_cols=160 Identities=16% Similarity=0.165 Sum_probs=136.3
Q ss_pred cchhhhhhhh-hcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHH
Q 022133 70 VNEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGR 148 (302)
Q Consensus 70 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r 148 (302)
+......+.. ++|++..+. .++.....+..++|++++|+|.||+|.|+++.++.++..+.++...+......+.++-
T Consensus 271 il~~~~~fg~~~~gls~~~l--ll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~g 348 (438)
T COG2270 271 ILAMGGVFGAADLGLSSTEL--LLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILG 348 (438)
T ss_pred HHHHHHHHHHHHcCccHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHH
Confidence 3333444444 888877665 6778888889999999999999999999999999999988888777776666677778
Q ss_pred HHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhhcc
Q 022133 149 FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFC 228 (302)
Q Consensus 149 ~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~ 228 (302)
++.|++.|+.+...-++.+++.|+++-++..|+|+.....++++||.+-+.+.+..|.-|..+...++..+++++.++.+
T Consensus 349 ll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v 428 (438)
T COG2270 349 LLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRV 428 (438)
T ss_pred HHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEee
Confidence 89999999999999999999999999999999999999999999999999999888767777777777777777888877
Q ss_pred CCC
Q 022133 229 AES 231 (302)
Q Consensus 229 pe~ 231 (302)
|+.
T Consensus 429 ~~~ 431 (438)
T COG2270 429 KVP 431 (438)
T ss_pred cCC
Confidence 764
No 155
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.32 E-value=6.2e-11 Score=107.60 Aligned_cols=153 Identities=19% Similarity=0.181 Sum_probs=129.3
Q ss_pred ccchhhhhhhh-hcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 022133 69 VVNEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLG 147 (302)
Q Consensus 69 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 147 (302)
.+...+|.+.+ .+|.+.... |++.+++.+|.++|.++.+.+.+|+++++.+..+.++.+++.+.+++.++.+..++.
T Consensus 236 a~~aLlPl~a~~~l~~~a~~y--Gll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~ 313 (524)
T PF05977_consen 236 AVWALLPLFARDVLGGGASGY--GLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIA 313 (524)
T ss_pred HHHHhhhHHHHHHhCCcHHHH--HHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 34445676654 456554444 999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHH
Q 022133 148 RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA 224 (302)
Q Consensus 148 r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~ 224 (302)
.++.|++.....+...+.+.+..|.+.||+.++++.+....+..+|..+.|.+.+..| .+..+.++++..++..++
T Consensus 314 l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g-~~~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 314 LFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG-VRTALLIAGAALLLSALI 389 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHH
Confidence 9999999988888888999999999999999999999999999999999999999888 577777665554444333
No 156
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.31 E-value=2.3e-11 Score=106.25 Aligned_cols=174 Identities=20% Similarity=0.243 Sum_probs=132.6
Q ss_pred HHHHHHHHHHHHhhhhccchhhh-hhhhhcc----cCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhh-hHHHHHHHHHH
Q 022133 53 VLVATLSSFLFGYHLGVVNEPLE-SISLDLG----FNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-GRRRAFQLCAL 126 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-Grr~~~~~~~~ 126 (302)
+..+...-+-.-+..+.....+. ++..+++ ++++++ .-+.+++..-.=+...++||++||+ |+|+.++.|.+
T Consensus 23 l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A--~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGai 100 (498)
T COG3104 23 LYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHA--TGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAI 100 (498)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhh--HHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Confidence 44455555444444433332222 2333333 666655 3445555444447888999999995 99999999999
Q ss_pred HHHHHHHHHhhcc--hhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCC--ccchhHhHHHHHHHHHHHHHHHHhhcccc
Q 022133 127 PMIIGASISATTR--NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPF--VRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (302)
Q Consensus 127 ~~~i~~~~~~~~~--~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~--~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 202 (302)
+++++.++.+.+. +...++++..+.++|.|..-+...++++|.+|++ +|-.+.+++..+.++|++++|++.+++.+
T Consensus 101 l~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~ 180 (498)
T COG3104 101 LMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAI 180 (498)
T ss_pred HHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHH
Confidence 9999999998884 7888999999999999999999999999999874 36667888888999999999999999999
Q ss_pred cCcchHHHHHHhHHHHHHHHHHhhccC
Q 022133 203 IAGWWRICFWVSIVPAAILCLAMVFCA 229 (302)
Q Consensus 203 ~~g~w~~~~~~~~~~~~~~~~~~~~~p 229 (302)
..| |+..|...++-...+++.++..+
T Consensus 181 ~~g-~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 181 NYG-WHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred hhC-HHHHHHHHHHHHHHHHHHHHHcc
Confidence 999 89999988777777776665543
No 157
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.31 E-value=4.6e-11 Score=107.85 Aligned_cols=173 Identities=16% Similarity=0.118 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHhhhhccc-hhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhh-----HHHHHHHHHH
Q 022133 53 VLVATLSSFLFGYHLGVVN-EPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG-----RRRAFQLCAL 126 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~G-----rr~~~~~~~~ 126 (302)
..++...++..+.. +... ...+.+.+++|++..+. +...+...+...+-.+ +|+++||++ ||+.++++.+
T Consensus 28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i--~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~ 103 (468)
T TIGR00788 28 LAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARY--QRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGL 103 (468)
T ss_pred HHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHH
Confidence 34455556777777 4444 44455566789887766 6888888898888655 999999998 7888888776
Q ss_pred HH-HHHHHHHhhcchhH-HHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHH---HHHHHHHHHHHhhccc
Q 022133 127 PM-IIGASISATTRNLI-GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIA---TCLGLMGSLLIGIPVK 201 (302)
Q Consensus 127 ~~-~i~~~~~~~~~~~~-~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~---~~~g~~~~~~~~~~~~ 201 (302)
+. +++....+..++.. ...+..++.+++.+......-++..|..+ +++....+..+.. ..+|.++++.+++.+.
T Consensus 104 l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~ 182 (468)
T TIGR00788 104 LGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLL 182 (468)
T ss_pred HHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 66 34433444444543 33447889999999999999999999998 5555544443333 4479999999999988
Q ss_pred ccCcchHHHHHHhHHHHHHHHHHhhccCCC
Q 022133 202 EIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (302)
Q Consensus 202 ~~~g~w~~~~~~~~~~~~~~~~~~~~~pe~ 231 (302)
+..+ |+..|++.++..++..+..++++|+
T Consensus 183 ~~~~-~~~~f~~~a~l~ll~~~~~~~~~E~ 211 (468)
T TIGR00788 183 DKTL-TRILFLITAALLLLQLFVSNLSKER 211 (468)
T ss_pred HhcC-cchHHHHHHHHHHHHHHHHHhcccc
Confidence 8877 8999988777777666666778886
No 158
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.31 E-value=1.2e-10 Score=99.78 Aligned_cols=171 Identities=19% Similarity=0.176 Sum_probs=133.8
Q ss_pred HHHHHHHHHHHHHhhhhccchhhhhhh-hhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhh--hHHHHHHH-HHHH
Q 022133 52 HVLVATLSSFLFGYHLGVVNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV--GRRRAFQL-CALP 127 (302)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~--Grr~~~~~-~~~~ 127 (302)
.++.++++.+........+.-+.|.+. +..|++...+ ++..+.+-++.+.|++++|+++||+ |||..+.+ .+++
T Consensus 253 ~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a--~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~ 330 (448)
T COG2271 253 LIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKA--NWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLL 330 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHH--HHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHH
Confidence 577888888888888888888888665 4567776666 7999999999999999999999996 67766644 3444
Q ss_pred HHHHHHHHhhcc--hhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHH-HHHHHHHHhhcccccC
Q 022133 128 MIIGASISATTR--NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCL-GLMGSLLIGIPVKEIA 204 (302)
Q Consensus 128 ~~i~~~~~~~~~--~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~ 204 (302)
..++....-.++ |+....++.++.|+..-+..-+......|..|++--|++.|+...+..+ |...+...-+++.+..
T Consensus 331 i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~ 410 (448)
T COG2271 331 ITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTW 410 (448)
T ss_pred HHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecC
Confidence 444444444554 4577778888889887777666677888999999999999999888777 8888888888888887
Q ss_pred cchHHHHHHhHHHHHHHHHHh
Q 022133 205 GWWRICFWVSIVPAAILCLAM 225 (302)
Q Consensus 205 g~w~~~~~~~~~~~~~~~~~~ 225 (302)
| |...|++..+.++++.++.
T Consensus 411 g-W~g~Fi~~~~~a~l~~lll 430 (448)
T COG2271 411 G-WDGGFIVLSIAALLAILLL 430 (448)
T ss_pred C-CcchHHHHHHHHHHHHHHH
Confidence 7 8998888766666655444
No 159
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.30 E-value=4.7e-11 Score=104.05 Aligned_cols=137 Identities=18% Similarity=0.073 Sum_probs=104.5
Q ss_pred ccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhh-hHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 022133 69 VVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-GRRRAFQLCALPMIIGASISATTRNLIGMLLG 147 (302)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 147 (302)
....++|.+.++.|.+.... +.+.+...++.++++++.|+++||+ +||+.+.++.++.+++.+.+.+.++..... .
T Consensus 215 ~~~~~lp~~~~~~g~~~~~~--g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 291 (355)
T TIGR00896 215 SLIGWLPAILISHGASAATA--GSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-W 291 (355)
T ss_pred HHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-H
Confidence 34556777777777765554 8899999999999999999999999 567777777777777766665554433222 4
Q ss_pred HHHHhhhhcchhhhHHHHhhhcCC-CCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchH
Q 022133 148 RFVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (302)
Q Consensus 148 r~~~g~~~~~~~~~~~~~~~e~~p-~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~ 208 (302)
.++.|++.+..++.....+.+..+ +++++...++.+....+|..++|.+.+.+.+..|.|.
T Consensus 292 ~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 292 ALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 567899998888887777765554 5677888898888888899999999999988776553
No 160
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.30 E-value=1.3e-10 Score=99.28 Aligned_cols=156 Identities=12% Similarity=0.115 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHhhhhccchhhhhhhhh---cccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH
Q 022133 53 VLVATLSSFLFGYHLGVVNEPLESISLD---LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~ 129 (302)
..+..+..++.......+..+.+.+..+ +|++.++. +...+.+..+.++|.++.++++||+|+|+.+.++.++.+
T Consensus 142 ~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a--~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~ 219 (310)
T TIGR01272 142 LVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQA--AHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAV 219 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 3444444444443344455666666653 46665555 788999999999999999999999999999888888777
Q ss_pred HHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHH
Q 022133 130 IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (302)
Q Consensus 130 i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~ 209 (302)
++.++....++... ..+-++.|++.+..+|...+...+.+|++ .+++.++. ....+|+++.|.+.|.+.+..| .+.
T Consensus 220 ~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g-~~~ 295 (310)
T TIGR01272 220 LLSIGAALTHGYVA-MWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLG-IQL 295 (310)
T ss_pred HHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhcc-chH
Confidence 77665555444333 34556889999999999999998888764 45666665 4566899999999999988777 577
Q ss_pred HHHHh
Q 022133 210 CFWVS 214 (302)
Q Consensus 210 ~~~~~ 214 (302)
.+++.
T Consensus 296 a~~v~ 300 (310)
T TIGR01272 296 AFALP 300 (310)
T ss_pred HHHHH
Confidence 77643
No 161
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.29 E-value=2.5e-10 Score=99.92 Aligned_cols=168 Identities=14% Similarity=0.022 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhH---HHHHHH-HHHHHH
Q 022133 54 LVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGR---RRAFQL-CALPMI 129 (302)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Gr---r~~~~~-~~~~~~ 129 (302)
+.+.+..+........+..++|.+.++.|++.. . +...++..++..++ .++++||..| |+.... ..++.+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~--~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a 268 (368)
T TIGR00903 195 WIIGAILGFGVALFDNLAIWLEAALRPAGLEDI-A--GDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIA 268 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-H--HHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHH
Confidence 334444444444444566788888888777643 2 55555555544444 4677777654 343332 333344
Q ss_pred HHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHH
Q 022133 130 IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (302)
Q Consensus 130 i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~ 209 (302)
+.....+...+....++.-.+.+++....++..+.+.+|.+|++.|++++|+.+....+|++++|.+.+.+.. + -..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~-~~~ 345 (368)
T TIGR00903 269 AFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--S-AEA 345 (368)
T ss_pred HHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--C-HHH
Confidence 4444444444444445555667777777777788999999999999999999999999999888888876663 3 456
Q ss_pred HHHHhHHHHHHHHHHhhccCC
Q 022133 210 CFWVSIVPAAILCLAMVFCAE 230 (302)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~pe 230 (302)
.|.+.+++.+++.+..+++++
T Consensus 346 ~f~~~~~~~~i~~~~~~~~~~ 366 (368)
T TIGR00903 346 YFTFLAILITIAFAIALLLPN 366 (368)
T ss_pred HHHHHHHHHHHHHHHHHhCCC
Confidence 666666666665555444454
No 162
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.29 E-value=1.5e-10 Score=99.80 Aligned_cols=154 Identities=20% Similarity=0.168 Sum_probs=123.1
Q ss_pred cchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc-chhHHHHHHH
Q 022133 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT-RNLIGMLLGR 148 (302)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~r 148 (302)
+.+.-|.+.+..|++.+.. +++..++.++.++|+.+.|+++|| +.|+.+.....+.++..+.+.+. ++.+..++.-
T Consensus 231 ftYi~P~L~~v~g~s~~~v--s~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~ 307 (394)
T COG2814 231 YTYIRPFLESVAGFSVSAV--SLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALL 307 (394)
T ss_pred HHhHHHHHHHccCCCHhHH--HHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 4444555666677776655 899999999999999999999999 89999888888777777666554 4555666666
Q ss_pred HHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhhcc
Q 022133 149 FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFC 228 (302)
Q Consensus 149 ~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~ 228 (302)
++.|+..+.........+++ .-++.+..+.+++....++|..+|..+++.+.++.| +....+++++..+++++..+..
T Consensus 308 ~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g-~~~~~~~~a~l~~~a~~~~~~~ 385 (394)
T COG2814 308 FLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALG-YAATGWVGAALLLLALLLALLS 385 (394)
T ss_pred HHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHHHHHHHHHH
Confidence 67888777666666666666 556889999999999999999999999999999987 8999999888888877666543
No 163
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.29 E-value=4.1e-12 Score=109.37 Aligned_cols=186 Identities=17% Similarity=0.069 Sum_probs=137.8
Q ss_pred HHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhh------HHHHHH-HHHHHHHHHHHHHhhhhhhhHHHHHHH
Q 022133 51 PHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAE------GLVVSM-CLGGAFIGSTLSGWIADGVGRRRAFQL 123 (302)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~i~~~~~g~l~d~~Grr~~~~~ 123 (302)
+.++..+...|+.....+..+.....+.+..|+..+.... .....+ ...+...|.++..+++|+.|||++.+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 4566667777887777777777888888877775544311 111122 223334467778889999999999999
Q ss_pred HHHHHHHHHHHHhhcch----hHHHHHHHHHHhh-hhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhh
Q 022133 124 CALPMIIGASISATTRN----LIGMLLGRFVVGT-GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGI 198 (302)
Q Consensus 124 ~~~~~~i~~~~~~~~~~----~~~~~~~r~~~g~-~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~ 198 (302)
|.+++.+..+..+...+ ...++++..+..+ +.-+-......+.+|.||++.|+++-|+.....-+|++++.....
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~ 463 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFL 463 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhh
Confidence 99999999988887655 2233333333332 222334456678899999999999999999999999999999988
Q ss_pred cccc-----cCcchHHHHHHhHHHHHHHHHHhhccCCChHHHHHhCCHHH
Q 022133 199 PVKE-----IAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAE 243 (302)
Q Consensus 199 ~~~~-----~~g~w~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~ 243 (302)
++.+ ..+ .+..+++.+.+.++..+..+++||| ++++.|
T Consensus 464 ~~t~~~yp~~~g-~~~v~~i~~~~~~~gi~~T~l~pEt------k~~~le 506 (538)
T KOG0252|consen 464 YLTDHNYPPNIG-VRNVFIILAGCMLLGILFTLLIPET------KGKSLE 506 (538)
T ss_pred HhhhccCCcccc-chHHHHHHHHHHHHhHheeEEeecc------cccCHH
Confidence 8887 556 6899999999999999999999999 777666
No 164
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.28 E-value=5.9e-11 Score=106.47 Aligned_cols=160 Identities=18% Similarity=0.134 Sum_probs=102.3
Q ss_pred ccchhhhhhhhh-cccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHH---HHHHHHHhhc--chhH
Q 022133 69 VVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM---IIGASISATT--RNLI 142 (302)
Q Consensus 69 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~---~i~~~~~~~~--~~~~ 142 (302)
....+.|.+.++ .|.+.... ++..+.+.++.+++.++.|+++||+|+++....+..+. .++.+.+... .+..
T Consensus 269 ~~~~~~p~~l~~~~g~s~~~~--~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (438)
T TIGR00712 269 GVLDWSPTYLKEVKHFALDKS--SWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPL 346 (438)
T ss_pred HHHHhHHHHHHHccCCChhhH--HHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchH
Confidence 344566766654 57665554 78888888999999999999999996533222232221 1222222221 2333
Q ss_pred HHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHH-HHHHHHHhhcccccCcchHHHHHHhHHHHHHH
Q 022133 143 GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLG-LMGSLLIGIPVKEIAGWWRICFWVSIVPAAIL 221 (302)
Q Consensus 143 ~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~ 221 (302)
...+..++.|++..+..........|.+|++.|+++.|+.+....+| .+++|.+.+.+.+..| |...+++.+...+++
T Consensus 347 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g-~~~~~~~~~~~~~~~ 425 (438)
T TIGR00712 347 VDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILA 425 (438)
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc-chHHHHHHHHHHHHH
Confidence 33334445555433332233456789999999999999998877776 5689999999988887 788887765555554
Q ss_pred HH-HhhccCCC
Q 022133 222 CL-AMVFCAES 231 (302)
Q Consensus 222 ~~-~~~~~pe~ 231 (302)
++ ..+.+||.
T Consensus 426 ~~~~~~~~~~~ 436 (438)
T TIGR00712 426 VILLIVVMIGE 436 (438)
T ss_pred HHHHHHHHhhc
Confidence 44 44556664
No 165
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.26 E-value=2.3e-11 Score=106.39 Aligned_cols=151 Identities=17% Similarity=0.185 Sum_probs=102.3
Q ss_pred HHHHHHHHhhhhccchhhhhhh-hhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhh-HHH-HHHHHH-HHHHHHH
Q 022133 57 TLSSFLFGYHLGVVNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG-RRR-AFQLCA-LPMIIGA 132 (302)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~G-rr~-~~~~~~-~~~~i~~ 132 (302)
.+..+...........+.|.+. +.+|.+..+. +...+...++.+++.++.|+++||.+ ||+ .+.... ....++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~ 299 (379)
T TIGR00881 222 SLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKA--SWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSL 299 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH
Confidence 3333333333344455566554 4567765554 78888899999999999999999864 333 222222 2222222
Q ss_pred HHHhh--cchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHH
Q 022133 133 SISAT--TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRIC 210 (302)
Q Consensus 133 ~~~~~--~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~ 210 (302)
..... ..+.....+..++.|+......+....++.|.+|++.|+++.++.+....+|..++|.+.+.+.+..| |+..
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~ 378 (379)
T TIGR00881 300 LVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG-WAGA 378 (379)
T ss_pred HHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc-cccc
Confidence 22222 23444555666677766655556667889999999999999999999999999999999999998877 7654
No 166
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.26 E-value=1.4e-10 Score=104.80 Aligned_cols=174 Identities=12% Similarity=0.067 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHhhhhccchhhhhhhh-hcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHH--------HHH
Q 022133 53 VLVATLSSFLFGYHLGVVNEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRA--------FQL 123 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~--------~~~ 123 (302)
++...+..+...........++|.+.. .+|.+..+. ++..++..++..++.++.|+++||+++|+. +..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~--g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 340 (465)
T TIGR00894 263 VWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKEN--GLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFN 340 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 344455555555555556667776654 467766555 888889999999999999999999876521 111
Q ss_pred HHHHH--HHHHHHHhh-cchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcc
Q 022133 124 CALPM--IIGASISAT-TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (302)
Q Consensus 124 ~~~~~--~i~~~~~~~-~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~ 200 (302)
+.... ++....... ..+....+++..+.+.+.+...+.......|..|. .+|...++.+....+|++++|.+.+.+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~ 419 (465)
T TIGR00894 341 GIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNI 419 (465)
T ss_pred HHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhhee
Confidence 11111 111111122 22333334444455555554555555556677765 899999999999999999999999988
Q ss_pred cccC--cchHHHHHHhHHHHHHHHHHhhccC
Q 022133 201 KEIA--GWWRICFWVSIVPAAILCLAMVFCA 229 (302)
Q Consensus 201 ~~~~--g~w~~~~~~~~~~~~~~~~~~~~~p 229 (302)
.+.. +.|...|++.++..+++.+...+.+
T Consensus 420 ~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 420 LSQDSKNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred eCCCCchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 7654 3488888887777777666655544
No 167
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.26 E-value=2.5e-10 Score=93.16 Aligned_cols=161 Identities=17% Similarity=0.122 Sum_probs=117.8
Q ss_pred hhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc-------
Q 022133 66 HLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT------- 138 (302)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~------- 138 (302)
..+.++.+.|.+.+.+|++.++. ..+.++-.+|..+| ++.|.+.|++|++.++.+|.+...++..+..++
T Consensus 17 t~Y~Fs~yS~~Lk~~l~~sq~~l--~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~ 93 (250)
T PF06813_consen 17 TTYTFSAYSPQLKSRLGYSQSQL--NTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPS 93 (250)
T ss_pred cccchhhhhHHHHHHhCCCHHHH--HHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCc
Confidence 34557778999999999987776 57888888888764 889999999999999999999998888766542
Q ss_pred chhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHH
Q 022133 139 RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPA 218 (302)
Q Consensus 139 ~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~ 218 (302)
.+.+.+.+..++.|.+.+...+.......+-|| ++||++.|+.-...++++.+-..+...+.+... -...+.++..+.
T Consensus 94 ~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~-~~fll~la~~~~ 171 (250)
T PF06813_consen 94 LPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDP-SSFLLFLAVLPA 171 (250)
T ss_pred cchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCCh-HHHHHHHHHHHH
Confidence 345667677777777766666666666668887 579999999988888887665555444444332 345555555666
Q ss_pred HHHHHHhhccCCC
Q 022133 219 AILCLAMVFCAES 231 (302)
Q Consensus 219 ~~~~~~~~~~pe~ 231 (302)
++.++..++++..
T Consensus 172 ~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 172 VVCLVAMFFVRPV 184 (250)
T ss_pred HHHHHHhhheecc
Confidence 6666666665443
No 168
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.26 E-value=1.4e-10 Score=116.09 Aligned_cols=144 Identities=17% Similarity=0.116 Sum_probs=115.3
Q ss_pred hhhhhh-hhhcccCCc-chhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 022133 72 EPLESI-SLDLGFNGN-TLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149 (302)
Q Consensus 72 ~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~ 149 (302)
.++|.+ .+.+|.+.. .. +++.+...++.+++.+++|+++||+++++.+.++.++.+++.+++.+..+.+.++++.+
T Consensus 253 ~~~~~~~~~~~g~s~~~~~--g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (1146)
T PRK08633 253 ANFPAYAKEVLGLDNTFQV--QYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFF 330 (1146)
T ss_pred HhhHHHHHHHhCCCcHHHH--HHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 344444 455777655 44 88999999999999999999999999999998888888888888877778888888889
Q ss_pred HHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHH
Q 022133 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVP 217 (302)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~ 217 (302)
+.|++.++..+...+++.+.+|++.||+++++.+....+|.++++.+++.+......+...+++.+.+
T Consensus 331 ~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 398 (1146)
T PRK08633 331 LFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALV 398 (1146)
T ss_pred HHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 99999999888889999999999999999999999999998888888776654221144455544433
No 169
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.24 E-value=4.2e-10 Score=99.97 Aligned_cols=145 Identities=14% Similarity=0.116 Sum_probs=106.0
Q ss_pred hhhhh-hhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc-----chhHHHHH
Q 022133 73 PLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT-----RNLIGMLL 146 (302)
Q Consensus 73 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~ 146 (302)
..|.+ .+++|.+..+. ++......++..++.++.|+++||+|+|+.+.++.++.+++.++..+. .+...+++
T Consensus 237 ~~p~~~~~~~g~~~~~~--g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 314 (406)
T PRK15402 237 LSPVILISGEQLSSYEY--GLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTA 314 (406)
T ss_pred HhHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHH
Confidence 34444 45567765444 677777777888999999999999999999988888777766655442 34556677
Q ss_pred HHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHH
Q 022133 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAIL 221 (302)
Q Consensus 147 ~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~ 221 (302)
..++.|++.+...+........ .++++||+..+.++....+|..+|+.+++.+.+..+ +....+..++.+++.
T Consensus 315 ~~~~~g~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~-~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 315 GLSLYAFGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGG-NGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCc-hHHHHHHHHHHHHHH
Confidence 7888999888776665555443 345899999999999999999999999999988877 344444444444433
No 170
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.23 E-value=8.8e-10 Score=97.52 Aligned_cols=142 Identities=15% Similarity=0.016 Sum_probs=107.5
Q ss_pred hhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhh
Q 022133 74 LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGT 153 (302)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~ 153 (302)
.|.+.+++|++.+.. +.......++..++.++.+++.||.+++..+....+..+...++....++.+.+.+..++.|+
T Consensus 240 ~p~~~~~~g~s~~~~--g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~ 317 (394)
T PRK10213 240 RPVYMNLAGFGVDGL--TLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGL 317 (394)
T ss_pred HHHHHHhcCCChhHH--HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 466777788876655 788888999999999999999999655544443333344444444455667777778889999
Q ss_pred hhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHH
Q 022133 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAA 219 (302)
Q Consensus 154 ~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~ 219 (302)
+.+...+....++.+..| +++++..++......+|..+|+.+++.+.+..| ++..++..++..+
T Consensus 318 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g-~~~~~~~~~~~~~ 381 (394)
T PRK10213 318 TFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIG-LTSPLMLSGTLML 381 (394)
T ss_pred HHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhhHHHHHHHHHH
Confidence 998888888888888887 556677788778889999999999999998877 6777776654443
No 171
>PRK10054 putative transporter; Provisional
Probab=99.23 E-value=1.5e-10 Score=102.50 Aligned_cols=135 Identities=13% Similarity=0.050 Sum_probs=105.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc-chhHHHHHHHHHHhhhhcchhhhHHHHhh
Q 022133 89 AEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT-RNLIGMLLGRFVVGTGMGLGPTVAALYVT 167 (302)
Q Consensus 89 ~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~r~~~g~~~~~~~~~~~~~~~ 167 (302)
..+.+.+...+.....+++.|.+.||.|+|+.+..+.++.+++.+...+. ++.+.++++.++.|++.+...|....++.
T Consensus 245 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~ 324 (395)
T PRK10054 245 VVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLID 324 (395)
T ss_pred HHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 33666777766667778899999999999999999988888777666654 56666777888999998888888888999
Q ss_pred hcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHh
Q 022133 168 EVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM 225 (302)
Q Consensus 168 e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~ 225 (302)
+..|++.|++..+..+ ...+|..+||.+++.+.+..| ....|++.+....++++..
T Consensus 325 ~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~ 380 (395)
T PRK10054 325 HIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLP-PWSLFVILALAIVAAWLLM 380 (395)
T ss_pred HhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcC-hhhHHHHHHHHHHHHHHHH
Confidence 9999999999988755 455899999999999999887 4566666545444444433
No 172
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.23 E-value=3e-10 Score=100.67 Aligned_cols=151 Identities=11% Similarity=-0.009 Sum_probs=110.6
Q ss_pred hhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhh-hhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 022133 72 EPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD-GVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFV 150 (302)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d-~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~ 150 (302)
.++|.+.++.+.+... .+++.+...++...+..+.+++.| |++.++.+..+.++.+++.++++..+++..+.+..++
T Consensus 229 ~~~p~~~~~~~~~~~~--~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 306 (400)
T PRK11646 229 LMLPIMVNDIAGSPSA--VKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICL 306 (400)
T ss_pred HhhhhhHHhhcCCchH--HHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 4567666665544333 377777777666666666666665 5666667777777777777777777777777777788
Q ss_pred HhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCc---chHHHHHHhHHHHHHHHHH
Q 022133 151 VGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG---WWRICFWVSIVPAAILCLA 224 (302)
Q Consensus 151 ~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g---~w~~~~~~~~~~~~~~~~~ 224 (302)
.+++.+...+...+++.+..|+++||+.+++++....+|..+||.+++.+.+..+ .....+++.++.+++..+.
T Consensus 307 ~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 307 FYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 8888888888888999999999999999999999999999999999999987642 1234555545555544443
No 173
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.22 E-value=5.3e-10 Score=101.32 Aligned_cols=112 Identities=9% Similarity=0.027 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhh-----cchhHHHHHHHHHHhhhhcchhhhHHHH
Q 022133 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT-----TRNLIGMLLGRFVVGTGMGLGPTVAALY 165 (302)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~r~~~g~~~~~~~~~~~~~ 165 (302)
+++.+...++.+++.+++++++||+|+|+.+.++.++.+++.+.... ..+.+.+++.-++.|++.+...+...++
T Consensus 269 ~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am 348 (473)
T PRK10429 269 PYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIM 348 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666666888899999999999999999998888776655544322 2345666677788899999888889999
Q ss_pred hhhcCC-------CCccchhHhHHHHHHHHHHHHHHHHhhcccc
Q 022133 166 VTEVSP-------PFVRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (302)
Q Consensus 166 ~~e~~p-------~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 202 (302)
++|..+ .+..|...+......-+|..+++.+.+.+.+
T Consensus 349 ~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~ 392 (473)
T PRK10429 349 VADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLG 392 (473)
T ss_pred HhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999955 3334456677788888888888888777654
No 174
>PRK09669 putative symporter YagG; Provisional
Probab=99.22 E-value=1.7e-10 Score=103.79 Aligned_cols=170 Identities=13% Similarity=0.102 Sum_probs=107.9
Q ss_pred HHHHHHHhhhhccchh-hhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhh----hhH-HHHHHHHHHHHHHH
Q 022133 58 LSSFLFGYHLGVVNEP-LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGR-RRAFQLCALPMIIG 131 (302)
Q Consensus 58 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~----~Gr-r~~~~~~~~~~~i~ 131 (302)
++.+..+.....+..+ ...+.+.+|++.... |.+.++..+..++..|+.|+++|| +|| |+.++.+.+..+++
T Consensus 16 ~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~--g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~ 93 (444)
T PRK09669 16 LGDTACNLVWQTVMLFLAYFYTDVFGLSAAIM--GTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVV 93 (444)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHH
Confidence 3333333333333444 344566678776554 899999999999999999999999 777 45566676776666
Q ss_pred HHHHhhcch------hHHHHHHHHHHhhhhcchhhhHHHHhhhcC-CCCccchhHhHHHHHHHHHHHHHHHHhhcccc--
Q 022133 132 ASISATTRN------LIGMLLGRFVVGTGMGLGPTVAALYVTEVS-PPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE-- 202 (302)
Q Consensus 132 ~~~~~~~~~------~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~-p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~-- 202 (302)
..+....++ ...+++..++.+.+.........++.+|+. ++++|.+..++...+..+|..+++.+...+..
T Consensus 94 ~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~ 173 (444)
T PRK09669 94 CLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDIL 173 (444)
T ss_pred HHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 654444432 344555566667666666666778899998 55889988888777777777666554333221
Q ss_pred -----cCcchHHHHHHhHHHHHHHHH-HhhccCC
Q 022133 203 -----IAGWWRICFWVSIVPAAILCL-AMVFCAE 230 (302)
Q Consensus 203 -----~~g~w~~~~~~~~~~~~~~~~-~~~~~pe 230 (302)
..+ |+..+.+.++++++..+ .++..+|
T Consensus 174 ~~~~~~~g-~~~~~~i~~ii~~v~~~~~~~~~~e 206 (444)
T PRK09669 174 GKGDEQKG-YFYAMMVMGLLGVVLFFCCFFMTKE 206 (444)
T ss_pred CCCchhhh-HHHHHHHHHHHHHHHHHHHhCCeEE
Confidence 123 67666665555444433 3333444
No 175
>PRK09848 glucuronide transporter; Provisional
Probab=99.22 E-value=7.4e-10 Score=99.71 Aligned_cols=111 Identities=17% Similarity=0.098 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcc--hhHHHHHHHHHHhhhhcchhhhHHHHhhhc
Q 022133 92 LVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR--NLIGMLLGRFVVGTGMGLGPTVAALYVTEV 169 (302)
Q Consensus 92 ~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~ 169 (302)
+......++.+++.+++++++||+|+|+.+.++.++.+++.+...+.+ +.+.+++..++.|+|.+...+...++.+|.
T Consensus 268 ~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~ 347 (448)
T PRK09848 268 LVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADT 347 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333444567788999999999999999999999988888777666543 556666777889999999998999999988
Q ss_pred CCCC-------ccchhHhHHHHHHHHHHHHHHHHhhcccc
Q 022133 170 SPPF-------VRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (302)
Q Consensus 170 ~p~~-------~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 202 (302)
.|.+ .+|...++.+....+|..+++.+.+.+.+
T Consensus 348 ~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~ 387 (448)
T PRK09848 348 VEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILG 387 (448)
T ss_pred hhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8754 45888899999999999998888776643
No 176
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.21 E-value=4.9e-10 Score=98.74 Aligned_cols=175 Identities=20% Similarity=0.264 Sum_probs=128.7
Q ss_pred HHHHHHHHHHhhhhccchhhhhhhhhcc-cCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH
Q 022133 55 VATLSSFLFGYHLGVVNEPLESISLDLG-FNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS 133 (302)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~ 133 (302)
...+..++.+........+.+.+.++.| .+.+.. +...++..+..++.-.+.+++..|+|.|+++.++.+..++=..
T Consensus 211 ~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~--g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~ 288 (400)
T PF03825_consen 211 VFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTI--GILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWL 288 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHH--HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 3444455556666666777777788877 444443 5666777778889999999999999999999999999888777
Q ss_pred HHhhc-chhHHHHH----HHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHH-HHHHHHHHHHHHhhcccccCcc-
Q 022133 134 ISATT-RNLIGMLL----GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQI-ATCLGLMGSLLIGIPVKEIAGW- 206 (302)
Q Consensus 134 ~~~~~-~~~~~~~~----~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~g~- 206 (302)
+++.. ++.+...+ ...+.|+..+........++.+.+|++.|+++.++++. ..++|..+|..++|++.+..|.
T Consensus 289 l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~ 368 (400)
T PF03825_consen 289 LYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGAR 368 (400)
T ss_pred HHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcch
Confidence 77766 44333332 34569999999999999999999999999999999765 6789999999999999987662
Q ss_pred ----hHHHHHHhHHHHHHHHHH-hhccCCC
Q 022133 207 ----WRICFWVSIVPAAILCLA-MVFCAES 231 (302)
Q Consensus 207 ----w~~~~~~~~~~~~~~~~~-~~~~pe~ 231 (302)
|...+.+.++..++..++ +++.+|+
T Consensus 369 ~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 369 GMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 334444444444443333 3444543
No 177
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.20 E-value=1.2e-09 Score=94.31 Aligned_cols=158 Identities=15% Similarity=0.070 Sum_probs=123.6
Q ss_pred CCcchhHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Q 022133 44 PSWKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL 123 (302)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~ 123 (302)
+..+++|..++...+..+..+++.-.+.+.......-+| +.+.. -|...++++.++...+.+.|+.|++|-|..+++
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~--~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~ll 114 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAA--DWLSMIYMVVSVPFGFAAMWILDKFGLRTALLL 114 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHH--HHHHHHHHHHHHHHhhHHHHhhcccchHHHHHH
Confidence 345677777777777777776666556666556666667 33333 599999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhc------chhH--HHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHH
Q 022133 124 CALPMIIGASISATT------RNLI--GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLL 195 (302)
Q Consensus 124 ~~~~~~i~~~~~~~~------~~~~--~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~ 195 (302)
+..+.+++..+-..+ +.++ ....+..+.+.+.-........+..-|||+++|..+..+...+..+|..++.+
T Consensus 115 gt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~l 194 (480)
T KOG2563|consen 115 GTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFL 194 (480)
T ss_pred HHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhh
Confidence 999999999876543 2333 55677777777776666666677888999999999999999999999999999
Q ss_pred HhhcccccC
Q 022133 196 IGIPVKEIA 204 (302)
Q Consensus 196 ~~~~~~~~~ 204 (302)
+.+.+..+.
T Consensus 195 lppilV~~~ 203 (480)
T KOG2563|consen 195 LPPILVPSS 203 (480)
T ss_pred ccceecCCC
Confidence 988887655
No 178
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.19 E-value=3.9e-10 Score=98.32 Aligned_cols=121 Identities=18% Similarity=0.204 Sum_probs=93.3
Q ss_pred hhhhccchhhhhhhhhcccCCcchhhHHHHHHHH-HHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc-----
Q 022133 65 YHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCL-GGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT----- 138 (302)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~----- 138 (302)
..........|.+..+.|++.++. +.+.++.. ++..++.+++|+++||+|||+.++.+.++.+++..+..+.
T Consensus 223 ~~~~~~~~~~~~~l~~~g~~~~~~--g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~ 300 (356)
T TIGR00901 223 LGDSAATVLTTLFLLDMGFSKEEI--ALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGH 300 (356)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHH--HHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 333344556666666677766654 66666555 5678999999999999999999988888877766654432
Q ss_pred ------chhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHH
Q 022133 139 ------RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATC 187 (302)
Q Consensus 139 ------~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~ 187 (302)
++.+.+..+.++.+++.+...+...+++.|.+|+++||+.+|+++...+
T Consensus 301 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 301 HDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred ccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 3456677778888999999999999999999999999999999876543
No 179
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.19 E-value=2.7e-10 Score=103.45 Aligned_cols=138 Identities=17% Similarity=0.145 Sum_probs=109.7
Q ss_pred Hhhhhccchhhhhhhhh-cccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhh--c--
Q 022133 64 GYHLGVVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT--T-- 138 (302)
Q Consensus 64 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~--~-- 138 (302)
+........++|.+.++ +|.+..+. ++......++..++.++.|++.||+|||+.+.++..+.+++..++.+ .
T Consensus 268 ~~~~~~~~~~~p~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 345 (485)
T TIGR00711 268 GLGLYGSFYLLPLYLQQVLGYTALQA--GLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPD 345 (485)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 33333344556666544 67665554 88888889999999999999999999999999998888888877662 2
Q ss_pred chhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhccccc
Q 022133 139 RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI 203 (302)
Q Consensus 139 ~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 203 (302)
.+...+....++.|++.+...+.......+..|+++|+.+.++++....+|..+|+.+.+.+.+.
T Consensus 346 ~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 346 TPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666788899999888777777788889999999999999999999999999998877653
No 180
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.18 E-value=3.3e-10 Score=113.23 Aligned_cols=146 Identities=17% Similarity=0.068 Sum_probs=110.4
Q ss_pred ccchhhhhhhhh-cccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc---------
Q 022133 69 VVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT--------- 138 (302)
Q Consensus 69 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~--------- 138 (302)
.+..++|.+..+ +|.+.... |++.+.+.++.++|.++.|+++|+.++++.+..+.++.+++.+.+.+.
T Consensus 243 ~~~~~~p~~~~~~~g~~~~~~--g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 320 (1140)
T PRK06814 243 VVLSQLPLLAKETLGGDENVA--TLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPA 320 (1140)
T ss_pred HHHHHhHHHHHHHcCCchHHH--HHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccc
Confidence 344456665554 57665544 899999999999999999999998887776666655555544433332
Q ss_pred -----------chhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcch
Q 022133 139 -----------RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWW 207 (302)
Q Consensus 139 -----------~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w 207 (302)
.+.+.++++.++.|++.+...+...+++.+.+|++.||+++|+.++...+|..+++++++.+......+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~ 400 (1140)
T PRK06814 321 QLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSI 400 (1140)
T ss_pred cccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCH
Confidence 556667778888999999988889999999999999999999999999999999999988876433225
Q ss_pred HHHHHHhHH
Q 022133 208 RICFWVSIV 216 (302)
Q Consensus 208 ~~~~~~~~~ 216 (302)
...+++.++
T Consensus 401 ~~~~~~~~~ 409 (1140)
T PRK06814 401 PWIILFIAL 409 (1140)
T ss_pred HHHHHHHHH
Confidence 555554433
No 181
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.18 E-value=1e-09 Score=96.72 Aligned_cols=147 Identities=13% Similarity=0.071 Sum_probs=102.7
Q ss_pred hhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHhh
Q 022133 75 ESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA-TTRNLIGMLLGRFVVGT 153 (302)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~r~~~g~ 153 (302)
|.+.+..|.+.++. +++.+...++.+++.++.|++.||+|+|+.+..+..+.+++.++.. ..++.+...+..++.++
T Consensus 224 ~~~~~~~g~s~~~~--~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 301 (382)
T PRK10091 224 PYMMFISGFSETSM--TFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCA 301 (382)
T ss_pred HHHHHhcCCCHHHH--HHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34445567766554 7888999999999999999999999999999888887777765544 34444555555556666
Q ss_pred hhcchhhhHH-HHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHh
Q 022133 154 GMGLGPTVAA-LYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM 225 (302)
Q Consensus 154 ~~~~~~~~~~-~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~ 225 (302)
+.+...+... ....+..|.+.++.+ ..+....+|..+||.+++.+.+..+.|+..+.+.++.+++.+...
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 302 GLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSL 372 (382)
T ss_pred HHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHH
Confidence 5544433333 344454555555443 346678899999999999998865448888888766666554443
No 182
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.18 E-value=3e-10 Score=101.06 Aligned_cols=155 Identities=14% Similarity=-0.005 Sum_probs=102.8
Q ss_pred cchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh-hc-----chhHH
Q 022133 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA-TT-----RNLIG 143 (302)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~-~~-----~~~~~ 143 (302)
++.++|.+.++ .++.... .....+..+...++.+++|+++||+|+|+++.++.++.+++..... .. .++..
T Consensus 271 ~s~~lp~~~~~-~~~~~~~--l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~ 347 (462)
T PRK15034 271 FSAGFAMLAKT-QFPDVNI--LRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIA 347 (462)
T ss_pred HHHHHHHHHHH-HcChHHH--HHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHH
Confidence 34456655554 2322221 2223344567788999999999999999999988887766654321 11 24555
Q ss_pred HHHHHHHHhhhhcchhhhHHHHhhhcCCC---------------------CccchhHhHHHHHHHHHHHHHHHHhhcccc
Q 022133 144 MLLGRFVVGTGMGLGPTVAALYVTEVSPP---------------------FVRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (302)
Q Consensus 144 ~~~~r~~~g~~~~~~~~~~~~~~~e~~p~---------------------~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 202 (302)
+.+..+...++.|......+.++...||. ++-|...|+......+|+++.|.+.+...+
T Consensus 348 ~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~ 427 (462)
T PRK15034 348 FYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLN 427 (462)
T ss_pred HHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHH
Confidence 55555555566666666777788888874 145567888888889999999988777777
Q ss_pred cCcchHHHHHHhHHHHHHHHHHhhc
Q 022133 203 IAGWWRICFWVSIVPAAILCLAMVF 227 (302)
Q Consensus 203 ~~g~w~~~~~~~~~~~~~~~~~~~~ 227 (302)
..|.+...|+...+..+++++..++
T Consensus 428 ~~g~~~~~~~~~~~~~~~~~~~~w~ 452 (462)
T PRK15034 428 MTGSPVGAMKVFLIFYIVCVLLTWL 452 (462)
T ss_pred HcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 7666777887766665555444433
No 183
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.18 E-value=4.2e-10 Score=91.45 Aligned_cols=149 Identities=18% Similarity=0.105 Sum_probs=109.6
Q ss_pred hhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHH-HHHhhcchhHHHHHHHHHHhhh
Q 022133 76 SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA-SISATTRNLIGMLLGRFVVGTG 154 (302)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~r~~~g~~ 154 (302)
.+.+.+|+|..++ +-+.+......++.+++.|.++||+|++...+.+..+..+.. ....+ +.+.-.+...+.|+.
T Consensus 290 fF~~rfGlS~~~a--~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLs 365 (459)
T KOG4686|consen 290 FFQKRFGLSAVSA--GNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLS 365 (459)
T ss_pred HHHHhhCCChhhc--cchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhh
Confidence 4677899987766 677787778888999999999999999988877766544433 22222 222334556778888
Q ss_pred hcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchH--HHHHH-hHHHHHHHHHHhhcc
Q 022133 155 MGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR--ICFWV-SIVPAAILCLAMVFC 228 (302)
Q Consensus 155 ~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~--~~~~~-~~~~~~~~~~~~~~~ 228 (302)
....-...+..++-+.|.++-|++.|+.+...++|..+.|++++.+.+..|.+. -.|++ ...+++....+.+.+
T Consensus 366 ysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 366 YSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred HHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 877766678889999999999999999999999999999999999998877432 23333 334444444444443
No 184
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.17 E-value=2.2e-10 Score=98.08 Aligned_cols=155 Identities=15% Similarity=0.151 Sum_probs=116.7
Q ss_pred cchhhhh-hhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc-------chh
Q 022133 70 VNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT-------RNL 141 (302)
Q Consensus 70 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~-------~~~ 141 (302)
++.++|. +..+++.+..++ |.....+.+...+..+++|+++||+|.++++.+....++++..+..+. .+.
T Consensus 237 fs~~l~~~~~~~fg~~~~~A--g~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~ 314 (417)
T COG2223 237 FSAYLPMYLVTQFGLSPVTA--GLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSF 314 (417)
T ss_pred HHHHHHHHHHHhcCCChhhH--HHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcch
Confidence 4455554 456678776665 788888989999999999999999999999999999988888777654 334
Q ss_pred HHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHH
Q 022133 142 IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAIL 221 (302)
Q Consensus 142 ~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~ 221 (302)
...++..+..+++.|......+.++...+|. +-|...|+......+|++.-|...+...+..|.+...|++.....+++
T Consensus 315 ~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a 393 (417)
T COG2223 315 VVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVA 393 (417)
T ss_pred HHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 4444444444444444445555667777765 678889999999999999999999988888887888888877777766
Q ss_pred HHHhhc
Q 022133 222 CLAMVF 227 (302)
Q Consensus 222 ~~~~~~ 227 (302)
.+..+.
T Consensus 394 ~v~~~~ 399 (417)
T COG2223 394 LVLTWA 399 (417)
T ss_pred HHHHHH
Confidence 665543
No 185
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.17 E-value=3.5e-09 Score=93.34 Aligned_cols=171 Identities=17% Similarity=0.217 Sum_probs=116.7
Q ss_pred HHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhh-HHHHHHHHHHHHHHHHHHHh
Q 022133 58 LSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG-RRRAFQLCALPMIIGASISA 136 (302)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~G-rr~~~~~~~~~~~i~~~~~~ 136 (302)
...++.....+...++++.+.++.|++..+. |.+.++..+..+++++++|.++||.+ +|+.+.+..++.++......
T Consensus 9 ~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qI--G~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~ 86 (400)
T PF03825_consen 9 LMYFLYFFAYGAFLPYLPLYLESRGFSGTQI--GILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLA 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 3344445556667788899999999877766 99999999999999999999999986 57777777777777666666
Q ss_pred hcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHH-hhcccccCc--chHHHHHH
Q 022133 137 TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLI-GIPVKEIAG--WWRICFWV 213 (302)
Q Consensus 137 ~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~g--~w~~~~~~ 213 (302)
..++++.+++..++..+......|...++..+... +++.-.|-.....++|-.++... ++.+....+ .....+++
T Consensus 87 ~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i 164 (400)
T PF03825_consen 87 FSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYI 164 (400)
T ss_pred HhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHH
Confidence 77888888888888888877777888787777764 34444555555666665555332 122222111 12345555
Q ss_pred hHHHHHHHHHHhhccCCCh
Q 022133 214 SIVPAAILCLAMVFCAESP 232 (302)
Q Consensus 214 ~~~~~~~~~~~~~~~pe~~ 232 (302)
.+...++.....+.+|++|
T Consensus 165 ~~~~~~ll~~~~l~lp~~~ 183 (400)
T PF03825_consen 165 AAILSLLLAGFALFLPKTP 183 (400)
T ss_pred HHHHHHHHHHHHHhCCCCc
Confidence 5555555555556678764
No 186
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.17 E-value=1.7e-09 Score=95.98 Aligned_cols=148 Identities=16% Similarity=0.127 Sum_probs=100.8
Q ss_pred hhhhhhcccCCcchhhHHHHHHHH-HHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHH---hhc-chhHHHHHHH-
Q 022133 75 ESISLDLGFNGNTLAEGLVVSMCL-GGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS---ATT-RNLIGMLLGR- 148 (302)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~---~~~-~~~~~~~~~r- 148 (302)
+.+.++.|++.++. +++..... ++.+++.+++|++.||+|||+.+..+.++.++..+.. +.. ++.+.+++..
T Consensus 234 ~~l~~~~G~~~~~~--g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 311 (402)
T PRK11902 234 TFLIRGAGFSAGEV--GIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIG 311 (402)
T ss_pred HHHHHhcCCCHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 34556677765544 67765544 4578999999999999999998877776665554333 333 3444444443
Q ss_pred ---HHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHh
Q 022133 149 ---FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM 225 (302)
Q Consensus 149 ---~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~ 225 (302)
++.|++.+...+....++.+.+|.+. .++++...++|..+++.+++.+.+..| |+..|.+.+++++++++..
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~G-~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 312 IENLCGGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAYG-WPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHH
Confidence 34555566666666777777777554 455555566777766678888889888 8999999888877776665
Q ss_pred hccC
Q 022133 226 VFCA 229 (302)
Q Consensus 226 ~~~p 229 (302)
+..+
T Consensus 387 ~~~~ 390 (402)
T PRK11902 387 WLMR 390 (402)
T ss_pred HHHh
Confidence 4443
No 187
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.17 E-value=3e-09 Score=93.49 Aligned_cols=135 Identities=18% Similarity=0.276 Sum_probs=96.3
Q ss_pred hhhhhh-hhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc-----chhHHHHH
Q 022133 73 PLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT-----RNLIGMLL 146 (302)
Q Consensus 73 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~ 146 (302)
+.|.+. +++|.+..+. +++.+...++..++.++.|++.||+|||+.+..+..+..++..++... ++...+++
T Consensus 228 ~~~~~~~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (385)
T TIGR00710 228 GAPFVYIDIMGVSPSVF--GLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIG 305 (385)
T ss_pred cChHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 344443 4667665544 788888899999999999999999999999988877777666555432 23444555
Q ss_pred HHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHH-HHHHHHHHHHhhcccccCcchHHHHH
Q 022133 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIAT-CLGLMGSLLIGIPVKEIAGWWRICFW 212 (302)
Q Consensus 147 ~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~g~w~~~~~ 212 (302)
..++.|++.+...+.......|.+| +.|+++.++++... ..|.+.++.++ .+.+..+ |...+.
T Consensus 306 ~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~-~~~~~~~-~~~~~~ 369 (385)
T TIGR00710 306 PMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS-LIHGNTA-WPMSLS 369 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH-hccccCh-HHHHHH
Confidence 6778888888888888888889887 67999999977655 45666666665 4443333 444433
No 188
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.14 E-value=4.3e-10 Score=101.90 Aligned_cols=173 Identities=12% Similarity=0.076 Sum_probs=110.5
Q ss_pred HHHHHHHHHhhhhccchhhhhhh-hhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhh----hhhH-HHHHHHHHHHHH
Q 022133 56 ATLSSFLFGYHLGVVNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD----GVGR-RRAFQLCALPMI 129 (302)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d----~~Gr-r~~~~~~~~~~~ 129 (302)
-.++.+..+...+.+.++++.+. +.+|++... +|.+..+.-+..++..|+.|+++| |+|| |+.++++.+..+
T Consensus 11 yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~--vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~ 88 (473)
T PRK10429 11 YGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGL--VGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANS 88 (473)
T ss_pred hccchhHHhHHHHHHHHHHHHHHHHhcCCCHHH--HHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHH
Confidence 33444455555555666655544 445776544 489999999999999999999999 5698 666677777777
Q ss_pred HHHHHHhhcch------hHHHHHHHHHHhhhhcchhhhHHHHhhhcC-CCCccchhHhHHHHHHHHHHHHHHHHhhcccc
Q 022133 130 IGASISATTRN------LIGMLLGRFVVGTGMGLGPTVAALYVTEVS-PPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (302)
Q Consensus 130 i~~~~~~~~~~------~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~-p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 202 (302)
++..++...++ +..+++..++.+++.........++..|+. ++++|.+..++...+..+|+++.+.+...+..
T Consensus 89 i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~ 168 (473)
T PRK10429 89 VVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVN 168 (473)
T ss_pred HHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77655543331 234455566677777777777888999998 58999998888666666665554444332211
Q ss_pred -------cCcchHHHHHHhHHHHHHHH-HHhhccCCC
Q 022133 203 -------IAGWWRICFWVSIVPAAILC-LAMVFCAES 231 (302)
Q Consensus 203 -------~~g~w~~~~~~~~~~~~~~~-~~~~~~pe~ 231 (302)
..+ |+...++.++..++.. +.++..+|.
T Consensus 169 ~~g~~~~~~g-~~~~~~i~~~~~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 169 YVGGGDRGFG-FQMFTLVLIAFFIVSTIITLRNVHEV 204 (473)
T ss_pred HhCCCchhhh-HHHHHHHHHHHHHHHHHHHHcCceec
Confidence 112 5555555444444333 333345554
No 189
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.13 E-value=5.1e-09 Score=88.61 Aligned_cols=158 Identities=18% Similarity=0.190 Sum_probs=107.0
Q ss_pred chhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 022133 71 NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFV 150 (302)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~ 150 (302)
++++-.+.+++|++.++. +.+....+....+..++.|.++||+|||+.-++..++.+++++. -..+++..++++|++
T Consensus 54 GpY~Y~LY~~yg~~~~qI--a~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-k~~~~~~~L~~GRvl 130 (354)
T PF05631_consen 54 GPYLYALYESYGFSEHQI--AILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-KHSSNYPVLLLGRVL 130 (354)
T ss_pred cchhHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-HhccccHHHHHHHHH
Confidence 444445567789887766 68888888888999999999999999999999988988888864 456889999999999
Q ss_pred HhhhhcchhhhHHHH-hhhc----CCCCccchhHhHHH-HHHHHHHHHHHHHhhcccccCcc-hHHHHHHhHHHHHHHHH
Q 022133 151 VGTGMGLGPTVAALY-VTEV----SPPFVRGTYGAFIQ-IATCLGLMGSLLIGIPVKEIAGW-WRICFWVSIVPAAILCL 223 (302)
Q Consensus 151 ~g~~~~~~~~~~~~~-~~e~----~p~~~R~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~g~-w~~~~~~~~~~~~~~~~ 223 (302)
.|++....++.--+. +.|. +|.+..+...+... ..+++-.+.+.+++-.+.+..+. -..+|.....+.+++.+
T Consensus 131 gGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~ 210 (354)
T PF05631_consen 131 GGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAV 210 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHH
Confidence 999999888877665 4454 23333333333222 22333344445555555443331 36677776666555544
Q ss_pred Hh-hccCCC
Q 022133 224 AM-VFCAES 231 (302)
Q Consensus 224 ~~-~~~pe~ 231 (302)
+. ...+|+
T Consensus 211 ~I~~~W~EN 219 (354)
T PF05631_consen 211 LILKTWPEN 219 (354)
T ss_pred HHHhccccc
Confidence 43 334565
No 190
>PRK09669 putative symporter YagG; Provisional
Probab=99.12 E-value=3.2e-09 Score=95.46 Aligned_cols=114 Identities=15% Similarity=0.065 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHH-hh-cchhHHHHHHHHHHhhhhcchhhhHHHHhhh
Q 022133 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS-AT-TRNLIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (302)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~-~~-~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e 168 (302)
+.+.....++.+++.+++++++||+|+|+.+..+.++.++..... .. .++.+.+++..++.|++.+...+...++++|
T Consensus 267 ~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad 346 (444)
T PRK09669 267 TLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSD 346 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445556667778889999999999999999988877665443322 22 3466667777889999999999999999999
Q ss_pred cCC-------CCccchhHhHHHHHHHHHHHHHHHHhhcccccC
Q 022133 169 VSP-------PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (302)
Q Consensus 169 ~~p-------~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 204 (302)
..+ .+..|...+..+.+..+|..+++.+++.+.+..
T Consensus 347 ~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~ 389 (444)
T PRK09669 347 VVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWV 389 (444)
T ss_pred hhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 886 233455677788888889888888888765543
No 191
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.12 E-value=4.3e-10 Score=97.47 Aligned_cols=128 Identities=26% Similarity=0.324 Sum_probs=103.3
Q ss_pred hhhccchhhhhh-hhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc---chh
Q 022133 66 HLGVVNEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT---RNL 141 (302)
Q Consensus 66 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~---~~~ 141 (302)
.......+.|.+ .+++|.+ +....+...+...++..++.++.|+++||+|+|+.+........+..+...+. .+.
T Consensus 221 ~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (352)
T PF07690_consen 221 VFSGFSFFLPLYLQEVLGFS-GPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSP 299 (352)
T ss_dssp HHHHHHHHHHHHCCHHHHCC-THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHH
T ss_pred HHHHhhcccchhhhhccCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 333456667765 7777877 22334788888999999999999999999998888877777776666655543 345
Q ss_pred HHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHH
Q 022133 142 IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSL 194 (302)
Q Consensus 142 ~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~ 194 (302)
...++..++.|++.+...+....++.|.+|+++||++.++.+....+|..++|
T Consensus 300 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 300 VWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 66667788899999999999999999999999999999999999999999887
No 192
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.12 E-value=2.5e-10 Score=102.12 Aligned_cols=155 Identities=17% Similarity=0.216 Sum_probs=110.8
Q ss_pred hhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhh----hhhHHHHH-HHHHHHHHHHHHHHhhc-c-------h
Q 022133 74 LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD----GVGRRRAF-QLCALPMIIGASISATT-R-------N 140 (302)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d----~~Grr~~~-~~~~~~~~i~~~~~~~~-~-------~ 140 (302)
.+.+.+..|++.... |.+..+.-+..++..|+.|.++| |+|||+.. ++|.+..+++..++... + .
T Consensus 25 ~~f~~~~~gl~~~~~--g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 25 LYFYTDVLGLSPALA--GLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHcCCCHHHH--HHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 444555567765544 88888888889999999999999 89976655 56777777777766654 3 1
Q ss_pred hHHHHHHHHHHhhhhcchhhhHHHHhhhcCC-CCccchhHhHHHHHHHHHHHHHHHHhhcccccCc------chHHHHHH
Q 022133 141 LIGMLLGRFVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG------WWRICFWV 213 (302)
Q Consensus 141 ~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p-~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g------~w~~~~~~ 213 (302)
...+.+..++..++.........++.+|+.+ +++|.+..+....+..+|.++...+.+.+.+..+ .|++..++
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 2334666777788888888888899999998 4789999999888888888766666665543222 37777777
Q ss_pred hHHHHHHHHHH-hhccCC
Q 022133 214 SIVPAAILCLA-MVFCAE 230 (302)
Q Consensus 214 ~~~~~~~~~~~-~~~~pe 230 (302)
.+++.++..+. .+..+|
T Consensus 183 ~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHhhhhhheeee
Confidence 66665554443 344555
No 193
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.10 E-value=1.2e-09 Score=99.69 Aligned_cols=131 Identities=11% Similarity=-0.006 Sum_probs=105.8
Q ss_pred cchhhhhhh-hhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhh---cchhHHHH
Q 022133 70 VNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT---TRNLIGML 145 (302)
Q Consensus 70 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~---~~~~~~~~ 145 (302)
...+.|.+. ...|.+..+. |.......++..++.++.|++.||+|+|+.+..+.++.+++.+++.. .++.+...
T Consensus 278 ~~~~~~~~lq~v~g~s~~~a--g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 355 (495)
T PRK14995 278 FELLMAQELQFVHGLSPLEA--GMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAW 355 (495)
T ss_pred HHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHH
Confidence 334555444 4467665555 88888899999999999999999999999998888887777655443 23455556
Q ss_pred HHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccc
Q 022133 146 LGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (302)
Q Consensus 146 ~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 202 (302)
+..++.|++.|...+.....+.+..|+++++.+.++++....+|..+|+.+.+.+.+
T Consensus 356 ~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 356 GLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678899999999888888888999999999999999999999999999998887654
No 194
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.08 E-value=1.6e-09 Score=94.39 Aligned_cols=142 Identities=14% Similarity=0.075 Sum_probs=118.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhh
Q 022133 89 AEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (302)
Q Consensus 89 ~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e 168 (302)
..|.+.+...+..++.-.+..++.+|+|.|+.++++..++++=.++++++++.+.+.+.+.+.|+..+........|+++
T Consensus 260 ~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~ 339 (412)
T PF01306_consen 260 MYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITA 339 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34889999999999999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred cCCCCccchhHhH-HHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHH-HHHHhhccCCC
Q 022133 169 VSPPFVRGTYGAF-IQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAI-LCLAMVFCAES 231 (302)
Q Consensus 169 ~~p~~~R~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~-~~~~~~~~pe~ 231 (302)
.+|++..++...+ .+.+..+|..+.+.++|.+.++.| .+..|++.+.+.++ .++..+.++++
T Consensus 340 ~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G-~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 340 HFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG-FQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred hCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC-cHHHHHHHHHHHHHHHHHheeeecCC
Confidence 9999998888888 578899999999999999999998 67777666555554 44455556543
No 195
>PRK10133 L-fucose transporter; Provisional
Probab=99.08 E-value=4.8e-09 Score=94.08 Aligned_cols=137 Identities=15% Similarity=0.022 Sum_probs=103.0
Q ss_pred hhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcch
Q 022133 79 LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLG 158 (302)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~ 158 (302)
+.+|.+.... ++....+.++.+++.++.+++.||+|||+++..+.++.+++.++..+.++.. .++...+.|++.+..
T Consensus 288 ~~~g~s~~~a--g~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i 364 (438)
T PRK10133 288 EIPGMTAGFA--ANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQ 364 (438)
T ss_pred hcCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHH
Confidence 3467766655 8999999999999999999999999999999888877776666655555532 245567899999999
Q ss_pred hhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHH
Q 022133 159 PTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAI 220 (302)
Q Consensus 159 ~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~ 220 (302)
+|...+...+.+|++ .+.+.++... ..+|..++|.+.+.+.+..|.-+..|++..+..+.
T Consensus 365 ~P~~~s~a~~~~~~~-~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~ 424 (438)
T PRK10133 365 YPTIFSLGIKNLGQD-TKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAV 424 (438)
T ss_pred HHHHHHHHHcccchh-hccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 999999999998764 5677777654 44677778788888777665246666654444333
No 196
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.07 E-value=2.7e-09 Score=95.53 Aligned_cols=145 Identities=14% Similarity=0.095 Sum_probs=111.7
Q ss_pred HHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 022133 56 ATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS 135 (302)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~ 135 (302)
..+..++........+...+++.++. +..+. ..+.+..+..++..++.+++++++||+|+|+.+..+.++.+++.++.
T Consensus 230 l~~~~~~~~~~~~~~~~~~~y~~~~v-l~~~~-~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~ 307 (428)
T PF13347_consen 230 LLLAFFLQWLAFALMNTFLPYYFTYV-LGNEG-LISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLL 307 (428)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHH-hcCch-hhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHH
Confidence 33444444444545555555555542 22222 23677888899999999999999999999999999999999988887
Q ss_pred hhcc--hhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCC-------CccchhHhHHHHHHHHHHHHHHHHhhcccc
Q 022133 136 ATTR--NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPP-------FVRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (302)
Q Consensus 136 ~~~~--~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~-------~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 202 (302)
.+.+ +.+.+++..++.|++.+...+...++++|..+. +..|...|+.+....+|..+++.+.+.+.+
T Consensus 308 ~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~ 383 (428)
T PF13347_consen 308 FFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLA 383 (428)
T ss_pred HHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 7765 889999999999999999999999999998873 445777888888888888888887776644
No 197
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.05 E-value=1.4e-08 Score=89.63 Aligned_cols=134 Identities=15% Similarity=0.158 Sum_probs=98.8
Q ss_pred hhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcc--hhHHH
Q 022133 67 LGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR--NLIGM 144 (302)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~~ 144 (302)
.+..+....++. +++++.++....+.......+.+++.+++..+++|+|+|+++.++.++.+++.++..+.+ +...+
T Consensus 252 ~~i~~s~~~yy~-~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~ 330 (467)
T COG2211 252 FNIRGSIMVYYV-TYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLI 330 (467)
T ss_pred HHHHhhhhheeE-EEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHH
Confidence 333333333333 356667776656777777777778899999999999999999999999999998877765 67778
Q ss_pred HHHHHHHhhhhcchhhhHHHHhhhcCC-----C--CccchhHhHHHHHHHHHHHHHHHHhhccc
Q 022133 145 LLGRFVVGTGMGLGPTVAALYVTEVSP-----P--FVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (302)
Q Consensus 145 ~~~r~~~g~~~~~~~~~~~~~~~e~~p-----~--~~R~~~~~~~~~~~~~g~~~~~~~~~~~~ 201 (302)
++..++.+++.+...+..+++++|... + +.-|...+.+..+.=+|..++..+.+++.
T Consensus 331 ~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L 394 (467)
T COG2211 331 VVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWIL 394 (467)
T ss_pred HHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999999987653 2 23344555566666667666665555543
No 198
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.03 E-value=9.9e-09 Score=90.82 Aligned_cols=138 Identities=13% Similarity=0.037 Sum_probs=102.5
Q ss_pred hhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcc
Q 022133 78 SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGL 157 (302)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~ 157 (302)
.+.+|.+..+. |++.+...++..+++++.+++.||.++|+.+..+.. .++.....++.++++..++..++.|++.+.
T Consensus 233 ~~~lg~s~~~~--G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~ 309 (393)
T PRK11195 233 PVALGITLNQP--AYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGF 309 (393)
T ss_pred HHHcCCChhHH--HHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhh
Confidence 34467666554 899999999999999999999999999988877753 344444445566666666777789998888
Q ss_pred hhhhHHHHhhhcCCCCc-cchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHH
Q 022133 158 GPTVAALYVTEVSPPFV-RGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAI 220 (302)
Q Consensus 158 ~~~~~~~~~~e~~p~~~-R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~ 220 (302)
..+...+.+.+..|++. +|++.++.+....+|..++..+.+.+. ..| -+..+++.++..++
T Consensus 310 ~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~ 371 (393)
T PRK11195 310 FVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV-KLG-VPVVAVIVGFGLLV 371 (393)
T ss_pred hhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHH-HcC-CCHHHHHHHHHHHH
Confidence 87777888888766654 799999999999999999998888653 444 34555444333333
No 199
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.02 E-value=3.3e-08 Score=86.80 Aligned_cols=120 Identities=11% Similarity=0.104 Sum_probs=82.0
Q ss_pred hhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh---h-cchhHHHHHHHHHHh
Q 022133 77 ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA---T-TRNLIGMLLGRFVVG 152 (302)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~---~-~~~~~~~~~~r~~~g 152 (302)
+.+.+|.+..+. ++..+...++.+++.++.|++.||+|||+.+..+..+..+..+... . ..+.+.+.++..+.+
T Consensus 221 ~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (377)
T PRK11102 221 YIELNGVSPQNF--GYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFV 298 (377)
T ss_pred HHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 445567765544 8888999999999999999999999999999888776544333221 1 123443444444444
Q ss_pred hhhcchhhhHHHHhhhcCCCCccchhHhHHHH-HHHHHHHHHHHHhhc
Q 022133 153 TGMGLGPTVAALYVTEVSPPFVRGTYGAFIQI-ATCLGLMGSLLIGIP 199 (302)
Q Consensus 153 ~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~-~~~~g~~~~~~~~~~ 199 (302)
.+.+........++.|..| +.|+++.++++. ...+|..+++++++.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 299 GCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred HHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4445555555566778776 789999998654 456778888877654
No 200
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.99 E-value=5.8e-11 Score=108.15 Aligned_cols=173 Identities=20% Similarity=0.265 Sum_probs=3.0
Q ss_pred HHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh
Q 022133 57 TLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (302)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~ 136 (302)
++..+.+....+.+...++.+.+.|+++..+. |++.+.+-++..+..++..++.+|..|-+.+-+|.+++++++++++
T Consensus 9 ~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~--G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 9 CLLGLFQMMVSGYVNSSLTTIERRFGLSSSQS--GLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFA 86 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHh
Confidence 33444445556667777888999999988877 9999999999999999999999998777788888889999888776
Q ss_pred hcc--------------------------------------------------hhHHHHHHHHHHhhhhcchhhhHHHHh
Q 022133 137 TTR--------------------------------------------------NLIGMLLGRFVVGTGMGLGPTVAALYV 166 (302)
Q Consensus 137 ~~~--------------------------------------------------~~~~~~~~r~~~g~~~~~~~~~~~~~~ 166 (302)
+-+ -+..++++.++.|+|....+++..+|+
T Consensus 87 lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYi 166 (539)
T PF03137_consen 87 LPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYI 166 (539)
T ss_dssp -----------------------------------------------------------------SSS------------
T ss_pred ccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeee
Confidence 410 034567889999999999999999999
Q ss_pred hhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccC---------------------cchHHHHHHhHHHHHHHHHHh
Q 022133 167 TEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA---------------------GWWRICFWVSIVPAAILCLAM 225 (302)
Q Consensus 167 ~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---------------------g~w~~~~~~~~~~~~~~~~~~ 225 (302)
-|-.+++.-+..+|++.....+|.++|.++++.+...+ |.|..-|++.++..++..+.+
T Consensus 167 DDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl 246 (539)
T PF03137_consen 167 DDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPL 246 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888765321 225455555555555555556
Q ss_pred hccCCC
Q 022133 226 VFCAES 231 (302)
Q Consensus 226 ~~~pe~ 231 (302)
+++|+.
T Consensus 247 ~~FPk~ 252 (539)
T PF03137_consen 247 FFFPKK 252 (539)
T ss_dssp ------
T ss_pred HcCCcc
Confidence 666654
No 201
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.99 E-value=2.1e-08 Score=89.12 Aligned_cols=145 Identities=8% Similarity=-0.097 Sum_probs=104.2
Q ss_pred cchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 022133 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149 (302)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~ 149 (302)
...+++.+.++.+.+.+....+...+.+..+..+|.++++++.||+++|+++.++.++.++.+++....++... .++..
T Consensus 251 ~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~ 329 (410)
T TIGR00885 251 CWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLT 329 (410)
T ss_pred HHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHH
Confidence 34556666555443333322244556666778899999999999999999998988888888888777766544 56677
Q ss_pred HHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccC-----cchHHHHHHhHHH
Q 022133 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA-----GWWRICFWVSIVP 217 (302)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----g~w~~~~~~~~~~ 217 (302)
+.|++.+..+|.......+..+++.+..+.++... .+|+.+.|.+.+.+.+.. |..+..|++..++
T Consensus 330 ~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~ 400 (410)
T TIGR00885 330 LCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLC 400 (410)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHHHHHH
Confidence 88888888899999999999987765444444333 389999999999998843 2256666654333
No 202
>PRK11043 putative transporter; Provisional
Probab=98.98 E-value=7.5e-08 Score=85.38 Aligned_cols=130 Identities=11% Similarity=0.024 Sum_probs=94.2
Q ss_pred hhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHH---hh--cchhHHHHH
Q 022133 72 EPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS---AT--TRNLIGMLL 146 (302)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~---~~--~~~~~~~~~ 146 (302)
.+.|.+.++.|.+..+. ++......++..++.++.+++.||+|+|+.+....++.+++.+.+ .. .++...+++
T Consensus 224 ~~~p~~~~~~g~s~~~~--g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (401)
T PRK11043 224 TGSPFILEQMGYSPADI--GLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLI 301 (401)
T ss_pred HHhHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHH
Confidence 34566667777765544 777777778888999999999999999987766555444433322 12 345555556
Q ss_pred HHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccC
Q 022133 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (302)
Q Consensus 147 ~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 204 (302)
...+.|++.+..++.......+..| ++||++.++++.....+...++.+.+.+.+..
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 358 (401)
T PRK11043 302 PFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTP 358 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 6777888888888888777777776 57999999998887777777777777776543
No 203
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.98 E-value=1.3e-08 Score=90.03 Aligned_cols=122 Identities=12% Similarity=0.149 Sum_probs=78.8
Q ss_pred hhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhc
Q 022133 77 ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMG 156 (302)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~ 156 (302)
+.+++|.+..+. +...+...++.+++.++.+++.||+|||+.++++.++..++.+...+.++....+....+.+.+.+
T Consensus 230 ~~~~~g~~~~~~--~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 307 (392)
T PRK10473 230 LMEQMGFSRGEY--AIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFS 307 (392)
T ss_pred HHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567765544 788888889999999999999999999999999988888877776665554443444444444444
Q ss_pred chhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCc
Q 022133 157 LGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (302)
Q Consensus 157 ~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 205 (302)
...+. .+..+..|.++|+ +.......++..+++.+++.+.+..|
T Consensus 308 ~~~~~--~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g 351 (392)
T PRK10473 308 VGFGV--AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLG 351 (392)
T ss_pred HHhHH--HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33332 3445555655554 33333444555555666655555444
No 204
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.97 E-value=1.5e-08 Score=90.69 Aligned_cols=174 Identities=14% Similarity=0.072 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHHHhhhhccchhhhhhhhh-cccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhH---------HHHH
Q 022133 52 HVLVATLSSFLFGYHLGVVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGR---------RRAF 121 (302)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Gr---------r~~~ 121 (302)
.++.+.++.+...+....+..++|.+.++ +|++..+. |+..++..+...+..+++|.++||.-+ |..-
T Consensus 259 ~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~--G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn 336 (466)
T KOG2532|consen 259 PVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRET--GFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFN 336 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhh--hHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHH
Confidence 46677778888888888888899987765 67777766 899999999999999999999998754 3333
Q ss_pred HHHHHHHHHHHHHHhhcch-hHHHHHHHHHHhhhhcchhhhHH-HHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhc
Q 022133 122 QLCALPMIIGASISATTRN-LIGMLLGRFVVGTGMGLGPTVAA-LYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIP 199 (302)
Q Consensus 122 ~~~~~~~~i~~~~~~~~~~-~~~~~~~r~~~g~~~~~~~~~~~-~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~ 199 (302)
.++..+.+++.+..++.++ ...+.+..+..+++..+...... .-..+. .+++-+..+|+.+....+..+++|.+.+.
T Consensus 337 ~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~ 415 (466)
T KOG2532|consen 337 TIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGI 415 (466)
T ss_pred hHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheee
Confidence 5555666666666666542 11112222222222222222221 112222 56778899999999999999999999999
Q ss_pred ccccC--cchHHHHHHhHHHHHHHHHHhhcc
Q 022133 200 VKEIA--GWWRICFWVSIVPAAILCLAMVFC 228 (302)
Q Consensus 200 ~~~~~--g~w~~~~~~~~~~~~~~~~~~~~~ 228 (302)
+.... ..|+.+|++.++..++..+.+.+.
T Consensus 416 ~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 416 IVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred EeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 88522 249999999888877766555443
No 205
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.95 E-value=7e-09 Score=90.46 Aligned_cols=167 Identities=20% Similarity=0.310 Sum_probs=102.8
Q ss_pred HHHHHHHHHhhhhccchhhhhhhhh-cccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHH--HHHH
Q 022133 56 ATLSSFLFGYHLGVVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM--IIGA 132 (302)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~--~i~~ 132 (302)
.....+...+..+...++.+.+.++ .|++.++. |.+.++..+...+.+++.|.++||+|.|+-++....+. ..+.
T Consensus 12 ~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~i--G~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~p 89 (412)
T PF01306_consen 12 LSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEI--GIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGP 89 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH--HHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHH--HHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHH
Confidence 3334444444566677777777765 78877766 99999999999999999999999999655544333222 2222
Q ss_pred H-HHhhc----chh-HHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcc
Q 022133 133 S-ISATT----RNL-IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW 206 (302)
Q Consensus 133 ~-~~~~~----~~~-~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 206 (302)
. ...+. .|. ...+++-+..|++.....|+.-+++..+. +..+.=.|-...+.++|.+++..++|.+.+..
T Consensus 90 ff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i~-- 165 (412)
T PF01306_consen 90 FFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNIN-- 165 (412)
T ss_dssp HHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeeeC--
Confidence 2 22222 222 23334444455555555566666665553 44455566677889999999999999887643
Q ss_pred hHHHHHHhHHHHHHHHHHhhcc
Q 022133 207 WRICFWVSIVPAAILCLAMVFC 228 (302)
Q Consensus 207 w~~~~~~~~~~~~~~~~~~~~~ 228 (302)
-+..||++...+++..++.++.
T Consensus 166 p~~~fwi~s~~~~il~lll~~~ 187 (412)
T PF01306_consen 166 PNIIFWIASAAAIILLLLLLLL 187 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSS
T ss_pred ccHHHHHHHHHHHHHHHHHHHc
Confidence 3677887766655555544443
No 206
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.95 E-value=3.2e-08 Score=83.34 Aligned_cols=154 Identities=28% Similarity=0.379 Sum_probs=115.1
Q ss_pred hhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcch--hH
Q 022133 65 YHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRN--LI 142 (302)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~--~~ 142 (302)
..........+.+..+.+.+......++..+.+.++..++.++.|.++||+|||+.++.+.....++.+..++..+ ..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (338)
T COG0477 16 LDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLA 95 (338)
T ss_pred HhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHH
Confidence 4444455566666666554432012378899999999999999999999999998888887765555556666555 88
Q ss_pred HHHHHHHHHhhhhcchhhhHHHHhhhcCCC-CccchhHhHHHH-HHHHHHHHHHHHhhccccc--CcchHHHHHHhHHHH
Q 022133 143 GMLLGRFVVGTGMGLGPTVAALYVTEVSPP-FVRGTYGAFIQI-ATCLGLMGSLLIGIPVKEI--AGWWRICFWVSIVPA 218 (302)
Q Consensus 143 ~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~-~~R~~~~~~~~~-~~~~g~~~~~~~~~~~~~~--~g~w~~~~~~~~~~~ 218 (302)
.+++.|++.|++.+...+....++.|++|. +.|+...+.... ...+|..+++.+++.+... .+ |+..+.......
T Consensus 96 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 174 (338)
T COG0477 96 LLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWG-WRAAFLLAALLG 174 (338)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHH
Confidence 888999999999998999999999999998 678888888777 5778888888777666544 23 888666655444
Q ss_pred H
Q 022133 219 A 219 (302)
Q Consensus 219 ~ 219 (302)
.
T Consensus 175 ~ 175 (338)
T COG0477 175 L 175 (338)
T ss_pred H
Confidence 3
No 207
>PRK11462 putative transporter; Provisional
Probab=98.95 E-value=7.1e-08 Score=87.11 Aligned_cols=111 Identities=17% Similarity=-0.012 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcc--hhHHHHHHHHHHhhhhcchhhhHHHHhhh
Q 022133 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR--NLIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (302)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~r~~~g~~~~~~~~~~~~~~~e 168 (302)
+.+.+.+.++.+++.+++++++||+|+|+.+..+..+.++..++..+.+ +...+++.-++.|++.+...+..+++++|
T Consensus 266 ~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad 345 (460)
T PRK11462 266 VAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSD 345 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667777888899999999999999999987765554444333333322 22234445566788777777777778877
Q ss_pred cCC-----CCccchh--HhHHHHHHHHHHHHHHHHhhccc
Q 022133 169 VSP-----PFVRGTY--GAFIQIATCLGLMGSLLIGIPVK 201 (302)
Q Consensus 169 ~~p-----~~~R~~~--~~~~~~~~~~g~~~~~~~~~~~~ 201 (302)
... +..|..+ .+......-+|..+++.+++.+.
T Consensus 346 ~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL 385 (460)
T PRK11462 346 TVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWML 385 (460)
T ss_pred hHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665 2244443 45555666666666666655544
No 208
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.94 E-value=4.3e-08 Score=90.06 Aligned_cols=140 Identities=16% Similarity=0.127 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhH---HHHHHHHHHhhhhcchhhhHHHHhhh
Q 022133 92 LVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLI---GMLLGRFVVGTGMGLGPTVAALYVTE 168 (302)
Q Consensus 92 ~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~r~~~g~~~~~~~~~~~~~~~e 168 (302)
............+....+.+.|++|||..+..+.++..+++++.++..... ...+...+..++.+..+...+.+.+|
T Consensus 354 ~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 433 (521)
T KOG0255|consen 354 LNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAE 433 (521)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444444446667777778999999999999999999999999888765433 35555666666777777778999999
Q ss_pred cCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhhccCCCh
Q 022133 169 VSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAESP 232 (302)
Q Consensus 169 ~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~pe~~ 232 (302)
++|+..|+.+.+..+....+|.+++|.+............... ++....+.+++..+++||+.
T Consensus 434 l~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255|consen 434 LIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLIL-FGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHH-HHHHHHHHHHHHHhcCcccC
Confidence 9999999999999999999999999988765544221112222 34445555566668899993
No 209
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.93 E-value=2.7e-08 Score=88.78 Aligned_cols=169 Identities=20% Similarity=0.216 Sum_probs=119.2
Q ss_pred HHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHH----HHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Q 022133 56 ATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSM----CLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (302)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~ 131 (302)
..+..+..+.......+..+.....++.+..... +..... ..+...+.+++.|.++||+|||..+....+...+.
T Consensus 27 ~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~-~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~ 105 (463)
T KOG2816|consen 27 LFLYMFSWGLSSTVMTNVILYLACTFGDDYQLEN-GLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILP 105 (463)
T ss_pred HHHHHHHHHhcCcchhhhhhhhhcccccCccchh-hhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHh
Confidence 3344444444444444444444444443322221 223333 35677889999999999999999999999988888
Q ss_pred HHHHhhcchhHHHHHHHHHHhhh--hcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHH
Q 022133 132 ASISATTRNLIGMLLGRFVVGTG--MGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (302)
Q Consensus 132 ~~~~~~~~~~~~~~~~r~~~g~~--~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~ 209 (302)
.+...+.. ++ +++ +.++. .+.......+++++....++|...+++.+.....+..++|.+++......+ .-.
T Consensus 106 ~~~~~~~~-~~-~~~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~-~a~ 179 (463)
T KOG2816|consen 106 ALCLLFQG-YW-FFL---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLG-IAL 179 (463)
T ss_pred HHHHHHHH-HH-Hhh---hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcC-chH
Confidence 77766655 22 222 33332 334456778899999999999999999999999999999999999988877 678
Q ss_pred HHHHhHHHHHHHHHH-hhccCCC
Q 022133 210 CFWVSIVPAAILCLA-MVFCAES 231 (302)
Q Consensus 210 ~~~~~~~~~~~~~~~-~~~~pe~ 231 (302)
+|.+..+..++..+. .+++||+
T Consensus 180 ~f~ia~~~~~~~~~y~~~~l~Es 202 (463)
T KOG2816|consen 180 VFLIAAASGILSLLYMLLFLPES 202 (463)
T ss_pred HHHHHHHHHHHHHHHHhhccccc
Confidence 888887777776665 4668887
No 210
>PRK11462 putative transporter; Provisional
Probab=98.90 E-value=4.9e-08 Score=88.14 Aligned_cols=163 Identities=15% Similarity=0.066 Sum_probs=107.4
Q ss_pred HHHHHHHhhhhccchhhhh-hhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhh----hhHHH-HHHHHHHHHHHH
Q 022133 58 LSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGRRR-AFQLCALPMIIG 131 (302)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~----~Grr~-~~~~~~~~~~i~ 131 (302)
++.+..+.....+..++.. +.+..|++.. .+|.+..+.-+--++..|+.|.++|| +|||+ .++++.+..+++
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~--~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~ 93 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAG--FVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIV 93 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHH--HHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHH
Confidence 3443434444444444444 4455676544 44888888888899999999999996 68765 445666777776
Q ss_pred HHHHhhcch------hHHHHHHHHHHhhhhcchhhhHHHHhhhcCC-CCccchhHhHHHHHHHHHHHHHHHHhhcccccC
Q 022133 132 ASISATTRN------LIGMLLGRFVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (302)
Q Consensus 132 ~~~~~~~~~------~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p-~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 204 (302)
..++...+. ...+++..++..++.........++.+|+.+ +++|.+..++...+..+|.++++.+...+....
T Consensus 94 ~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~ 173 (460)
T PRK11462 94 CVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLI 173 (460)
T ss_pred HHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 665544332 3345556667778888877778889999987 789999999988888888777766654433221
Q ss_pred c------chHHHHHHhHHHHHHHH
Q 022133 205 G------WWRICFWVSIVPAAILC 222 (302)
Q Consensus 205 g------~w~~~~~~~~~~~~~~~ 222 (302)
| .|+....+.+++++++.
T Consensus 174 g~~~~~~g~~~~~~i~~ii~~i~~ 197 (460)
T PRK11462 174 GGDNKPLGFQGGIAVLSVVAFMML 197 (460)
T ss_pred CCCchhhhHHHHHHHHHHHHHHHH
Confidence 1 25555555444444433
No 211
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.90 E-value=3.7e-09 Score=93.08 Aligned_cols=166 Identities=21% Similarity=0.133 Sum_probs=135.2
Q ss_pred HHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc
Q 022133 59 SSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT 138 (302)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~ 138 (302)
..++.+.....+..++-...+|.|-...- -|........|-++.-++.+++..|+|+-+++..++.+.++=.+.....
T Consensus 379 ~av~mG~g~~lv~tFLfWHled~~~~~~L--fGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L 456 (618)
T KOG3762|consen 379 VAVVMGAGVGLVFTFLFWHLEDLGGIKTL--FGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL 456 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCccee--eeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh
Confidence 33444444444555555556776643333 3777777788889999999999999999999999999999888888899
Q ss_pred chhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHH-HHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHH
Q 022133 139 RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFI-QIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVP 217 (302)
Q Consensus 139 ~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~ 217 (302)
.|+|+.+..-+++|+..+..+....+|++...|++.|.++.++. ....++|-.+|.++++.+.+..+ -+..|.+.++.
T Consensus 457 ~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg-~~ttf~~~giA 535 (618)
T KOG3762|consen 457 QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG-ARTTFRIFGIA 535 (618)
T ss_pred cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh-hHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999995 46779999999999999999888 58888877776
Q ss_pred HHHHHHHhhc
Q 022133 218 AAILCLAMVF 227 (302)
Q Consensus 218 ~~~~~~~~~~ 227 (302)
+++.++....
T Consensus 536 cl~~l~~~~~ 545 (618)
T KOG3762|consen 536 CLVTLALFIS 545 (618)
T ss_pred HHHHHHHHHH
Confidence 6665555443
No 212
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.87 E-value=1.2e-07 Score=80.08 Aligned_cols=160 Identities=15% Similarity=0.109 Sum_probs=122.4
Q ss_pred HhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhh-hHHHHHHHHHHHHHHHHHHHhhcchhH
Q 022133 64 GYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-GRRRAFQLCALPMIIGASISATTRNLI 142 (302)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-Grr~~~~~~~~~~~i~~~~~~~~~~~~ 142 (302)
....+....++|.+..|-|+|..+. |++.+...+.....++....+.+|. .+|+..+....++.++...+.+.+.-.
T Consensus 221 S~~~Y~~~~WLP~ili~~G~sa~~a--G~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~ 298 (395)
T COG2807 221 SLLYYIVIGWLPAILIDRGLSAAEA--GSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQL 298 (395)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHh--hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhH
Confidence 3444556778999999999988777 8999999999999999999999964 567777777777777777776665443
Q ss_pred HHHHHHHHHhhhhcchhhhHHHHhhhcCCCCc-cchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHH
Q 022133 143 GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFV-RGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAIL 221 (302)
Q Consensus 143 ~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~-R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~ 221 (302)
.+.. .++.|++.|+.++....++.......+ -+...++.+....+=..+||.+.|++.|..|+|+...+..+...+..
T Consensus 299 ~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m 377 (395)
T COG2807 299 PILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLM 377 (395)
T ss_pred HHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHH
Confidence 3333 489999999999999999988876544 34445555655555567899999999999998998887766665555
Q ss_pred HHHhh
Q 022133 222 CLAMV 226 (302)
Q Consensus 222 ~~~~~ 226 (302)
.+.-+
T Consensus 378 ~i~Gl 382 (395)
T COG2807 378 LIFGL 382 (395)
T ss_pred HHHHh
Confidence 44443
No 213
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.87 E-value=1.5e-07 Score=85.40 Aligned_cols=130 Identities=15% Similarity=-0.003 Sum_probs=99.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhH-----HHHH--HHHHHHHHHHHHHHhh---------cchhHHHHHHHHHHhh
Q 022133 90 EGLVVSMCLGGAFIGSTLSGWIADGVGR-----RRAF--QLCALPMIIGASISAT---------TRNLIGMLLGRFVVGT 153 (302)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~~g~l~d~~Gr-----r~~~--~~~~~~~~i~~~~~~~---------~~~~~~~~~~r~~~g~ 153 (302)
.+++.+...+..++.+++..++-.+.+| +... .+|+++.+++.+..++ ..|+++++...++.++
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 3677777777777887776654444444 2333 6777777777766653 3578889999999999
Q ss_pred hhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHH
Q 022133 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAI 220 (302)
Q Consensus 154 ~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~ 220 (302)
|.....|....++.+..|++.||+.+|++.....+|..+++.+........+ |...|...++..++
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 459 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQG-VTGVFGKIGLVTLL 459 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-hhhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999888887655555 56665554444333
No 214
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.86 E-value=4.1e-08 Score=88.79 Aligned_cols=150 Identities=11% Similarity=0.006 Sum_probs=113.3
Q ss_pred hhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc----------chhHHHHHHH
Q 022133 79 LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT----------RNLIGMLLGR 148 (302)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~r 148 (302)
..+|++.... |.+.....++.+++..+.+++.+|++.|+++.++.++.+++.+..... ++...++..-
T Consensus 281 ~~lG~s~~~~--G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~ 358 (468)
T TIGR00788 281 QCLPGGPSFS--GMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDS 358 (468)
T ss_pred ccCCCCcchh--hhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehh
Confidence 4567766655 888888889999999999999999999999999999988877543211 2333445556
Q ss_pred HHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCc----chHHHHH---HhHHHHHHH
Q 022133 149 FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG----WWRICFW---VSIVPAAIL 221 (302)
Q Consensus 149 ~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g----~w~~~~~---~~~~~~~~~ 221 (302)
++.+++.+........++.+..|++.+|+..++.+...++|..+++.+++.+.+..| .++..+. +..++.++.
T Consensus 359 ~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~ 438 (468)
T TIGR00788 359 IIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLP 438 (468)
T ss_pred HHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHH
Confidence 788888888888889999999999999999999999999999999999888876554 1222222 233334444
Q ss_pred HHHhhccCC
Q 022133 222 CLAMVFCAE 230 (302)
Q Consensus 222 ~~~~~~~pe 230 (302)
+...+++|+
T Consensus 439 l~~~~llP~ 447 (468)
T TIGR00788 439 LPLLHLLPR 447 (468)
T ss_pred HHHHHhCCC
Confidence 444456785
No 215
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.84 E-value=9.9e-09 Score=94.53 Aligned_cols=177 Identities=17% Similarity=0.246 Sum_probs=144.5
Q ss_pred HHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Q 022133 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~ 132 (302)
+.+..+..+..++...++...+..+-+.++++.++. |++.+.+-++..+...+..+..-|.-|-+.+-+|.+++++++
T Consensus 99 l~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~s--G~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 99 LVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQS--GLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcc--eeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 344455566667777777778888888899988776 899999999999999999999999988888899999999999
Q ss_pred HHHhhc--------------------c--------------------------------hhHHHHHHHHHHhhhhcchhh
Q 022133 133 SISATT--------------------R--------------------------------NLIGMLLGRFVVGTGMGLGPT 160 (302)
Q Consensus 133 ~~~~~~--------------------~--------------------------------~~~~~~~~r~~~g~~~~~~~~ 160 (302)
+++++- + -+..++++.++.|+|....++
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 887751 0 022567789999999999999
Q ss_pred hHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccC------------------cchHHHHHHhHHHHHHHH
Q 022133 161 VAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA------------------GWWRICFWVSIVPAAILC 222 (302)
Q Consensus 161 ~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------------------g~w~~~~~~~~~~~~~~~ 222 (302)
....|+-|...+++-...+|+......+|.++|.+++++....+ |.|..-|++.+.+.++..
T Consensus 257 lGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a 336 (735)
T KOG3626|consen 257 LGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA 336 (735)
T ss_pred CCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888764211 236667777777777777
Q ss_pred HHhhccCCC
Q 022133 223 LAMVFCAES 231 (302)
Q Consensus 223 ~~~~~~pe~ 231 (302)
+.++++|.+
T Consensus 337 ~p~f~fPk~ 345 (735)
T KOG3626|consen 337 VPLFFFPKE 345 (735)
T ss_pred HHHHhCccc
Confidence 778888865
No 216
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.83 E-value=1.7e-07 Score=82.92 Aligned_cols=170 Identities=22% Similarity=0.208 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHhhhhccchhhhhhh-hhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhh----hhH-HHHHHHHHHH
Q 022133 54 LVATLSSFLFGYHLGVVNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGR-RRAFQLCALP 127 (302)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~----~Gr-r~~~~~~~~~ 127 (302)
+.-.++-+...........++..+. +..|++... +|.+..+.-+.-++.-|+.|.++|| +|| |+.++.+.+.
T Consensus 15 i~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~--aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip 92 (467)
T COG2211 15 IGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAAL--AGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIP 92 (467)
T ss_pred HhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHH--HHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHH
Confidence 3444455555555555555665544 446765544 4788888888889999999999996 676 5556777787
Q ss_pred HHHHHHHHhhcch------hHHHHHHHHHHhhhhcchhhhHHHHhhhcCC-CCccchhHhHHHHHHHHHHHHHHHHhhcc
Q 022133 128 MIIGASISATTRN------LIGMLLGRFVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (302)
Q Consensus 128 ~~i~~~~~~~~~~------~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p-~~~R~~~~~~~~~~~~~g~~~~~~~~~~~ 200 (302)
.++.+.++..+++ ..-.++...+.+++.........++.+|+.+ +++|.+..++-..+..+|.++..++.+.+
T Consensus 93 ~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~pl 172 (467)
T COG2211 93 FAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPL 172 (467)
T ss_pred HHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887777766653 4445667888899998888888889999975 58999999998888888876665555444
Q ss_pred cccCc------chHHHHHHhHHHHHHHHHHh
Q 022133 201 KEIAG------WWRICFWVSIVPAAILCLAM 225 (302)
Q Consensus 201 ~~~~g------~w~~~~~~~~~~~~~~~~~~ 225 (302)
....+ +|+...++.+++++++.+..
T Consensus 173 v~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~ 203 (467)
T COG2211 173 VKLFGGGDKALGYQGTALVLGVIGVILLLFC 203 (467)
T ss_pred HHHhCCCcchhhHHHHHHHHHHHHHHHHHHH
Confidence 32211 25555555555544444433
No 217
>PRK09848 glucuronide transporter; Provisional
Probab=98.83 E-value=1.5e-07 Score=84.71 Aligned_cols=140 Identities=17% Similarity=0.171 Sum_probs=85.9
Q ss_pred HHHHHHHhhhhccchhhh-hhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhh----hHHHHH-HHHHHHHHHH
Q 022133 58 LSSFLFGYHLGVVNEPLE-SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV----GRRRAF-QLCALPMIIG 131 (302)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~----Grr~~~-~~~~~~~~i~ 131 (302)
++.+......+...++++ ++.+..|++..+ +|.+.+...+..++..+++|+++||. |||+.. +++.+...+.
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~--~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~ 92 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAA--AGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIF 92 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHH--HHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHH
Confidence 343344444444444443 445556876554 49999999999999999999999996 777654 5555544444
Q ss_pred HHH-Hhhc----ch--hHHHHHHHHHHhhhhcchhhhHHHHhhhcCCC-CccchhHhHHHHHH-----HHHHHHHHHHhh
Q 022133 132 ASI-SATT----RN--LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPP-FVRGTYGAFIQIAT-----CLGLMGSLLIGI 198 (302)
Q Consensus 132 ~~~-~~~~----~~--~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~-~~R~~~~~~~~~~~-----~~g~~~~~~~~~ 198 (302)
..+ +... .+ ...+++..++.+++.+...+...++..|+... ++|....+....+. .++..++|.+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~ 172 (448)
T PRK09848 93 SVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKN 172 (448)
T ss_pred HHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333 2221 11 22234455667777777776666777776644 67888766654432 344556666655
Q ss_pred c
Q 022133 199 P 199 (302)
Q Consensus 199 ~ 199 (302)
.
T Consensus 173 ~ 173 (448)
T PRK09848 173 S 173 (448)
T ss_pred h
Confidence 4
No 218
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.81 E-value=3.8e-09 Score=85.99 Aligned_cols=142 Identities=16% Similarity=0.103 Sum_probs=108.5
Q ss_pred HHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhh-hhHHHHHHHHHHHHHHHHHHHhh--
Q 022133 61 FLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMIIGASISAT-- 137 (302)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~Grr~~~~~~~~~~~i~~~~~~~-- 137 (302)
|...+..-.....-..+..+.+++..+. .++.+.+..-+.+-++++|++.|| +|-|..-++-++...++.++++.
T Consensus 54 fgsyfcyd~p~alq~~fk~d~ni~~akf--tLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Gg 131 (459)
T KOG4686|consen 54 FGSYFCYDAPGALQIDFKLDSNIEYAKF--TLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGG 131 (459)
T ss_pred ccceeecCCchhhhhhhhcccccceeee--eeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhch
Confidence 3333333333334445555666655555 588899999999999999999996 68777777777777788877764
Q ss_pred -cchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccC
Q 022133 138 -TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (302)
Q Consensus 138 -~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 204 (302)
.+.++++..+|++.|+|.-..-.....+..-||..++-+..+|+......+|+.+...+.+++.+..
T Consensus 132 i~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~ 199 (459)
T KOG4686|consen 132 ISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTM 199 (459)
T ss_pred HHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHH
Confidence 5789999999999999877776777889999999999999999998888888877666666655543
No 219
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.81 E-value=6.6e-07 Score=79.16 Aligned_cols=127 Identities=17% Similarity=0.151 Sum_probs=89.5
Q ss_pred hhhhhh-cccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH-HHHHHHhh--cchhHHHHHHHHH
Q 022133 75 ESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI-IGASISAT--TRNLIGMLLGRFV 150 (302)
Q Consensus 75 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~-i~~~~~~~--~~~~~~~~~~r~~ 150 (302)
+.+.++ +|.+..+. ++......++..++.++.+++.||+|++........+.. +....... ..+.+.+.+..++
T Consensus 231 ~~~~~~~~g~~~~~~--~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (394)
T PRK11652 231 GVLMGAVLGLSSMTV--SILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAAL 308 (394)
T ss_pred hHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence 334443 66655443 777777888888899999999999984443322222221 21112222 2345566777888
Q ss_pred HhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccC
Q 022133 151 VGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (302)
Q Consensus 151 ~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 204 (302)
.|++.+...+....+..|.+| +++|...++.+....+|..+++.+++.+....
T Consensus 309 ~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~ 361 (394)
T PRK11652 309 FFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQTG 361 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 999999889999999999887 57899999999999999999999998876553
No 220
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.80 E-value=3.1e-07 Score=79.91 Aligned_cols=159 Identities=14% Similarity=0.095 Sum_probs=125.9
Q ss_pred hhhhhhh-cccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHh
Q 022133 74 LESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVG 152 (302)
Q Consensus 74 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g 152 (302)
.|.+.+. .|++.++.. .-+.-...-.+.+..++...+.|..|-|++++++.+...+...+..+.++...+-+..++.|
T Consensus 27 ~~yL~~~~kn~T~~qv~-~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg 105 (412)
T PF01770_consen 27 TPYLTGPDKNFTEEQVN-NEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYG 105 (412)
T ss_pred hHHHcCCccCCCHHHHH-HhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHH
Confidence 3444443 688777653 45555566677788899999999999999999999999988888889999999999999999
Q ss_pred hhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCc-chHHHHHHhHHHHHHHHHHhhccCCC
Q 022133 153 TGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG-WWRICFWVSIVPAAILCLAMVFCAES 231 (302)
Q Consensus 153 ~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g-~w~~~~~~~~~~~~~~~~~~~~~pe~ 231 (302)
++.+. ..+.++++--..|+++-.++.+....+.-+|.+++.++|..+....+ .++...++......++++..+++|..
T Consensus 106 ~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~ 184 (412)
T PF01770_consen 106 LATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMP 184 (412)
T ss_pred HHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 98766 45777888888888888889999889999999999998887776433 26667677776667777777888876
Q ss_pred hHH
Q 022133 232 PHW 234 (302)
Q Consensus 232 ~~~ 234 (302)
++.
T Consensus 185 ~~S 187 (412)
T PF01770_consen 185 KRS 187 (412)
T ss_pred Ccc
Confidence 543
No 221
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.78 E-value=2.6e-07 Score=84.26 Aligned_cols=108 Identities=9% Similarity=-0.036 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHHHHH----HhhhhhhhHHHHHHHHHHHHHHHHHHHhhcch---------hHHHHHHHHHHhhhhcc
Q 022133 91 GLVVSMCLGGAFIGSTLS----GWIADGVGRRRAFQLCALPMIIGASISATTRN---------LIGMLLGRFVVGTGMGL 157 (302)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~----g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~---------~~~~~~~r~~~g~~~~~ 157 (302)
+++.+...+...+..++. +++.+|++....+.+|+++.+++.+..++..+ .++++..+++.|++.+.
T Consensus 319 ~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~ 398 (500)
T PRK09584 319 EQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELM 398 (500)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHH
Confidence 455666555555555555 66667777778888999998888877665533 45788889999999999
Q ss_pred hhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhh
Q 022133 158 GPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGI 198 (302)
Q Consensus 158 ~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~ 198 (302)
..|....++.+..|++.||+++|++..+..+|..++..+..
T Consensus 399 ~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 399 ISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVAN 439 (500)
T ss_pred HhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888888877766654
No 222
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.73 E-value=3.3e-08 Score=86.36 Aligned_cols=117 Identities=18% Similarity=0.154 Sum_probs=83.2
Q ss_pred cchhhhhhh-hhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhh--cc--hhHHH
Q 022133 70 VNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT--TR--NLIGM 144 (302)
Q Consensus 70 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~--~~--~~~~~ 144 (302)
...+.|.+. +.+|.+..+. +++.+...++.+++.+++|+++||+|||+.+..+....+.+..+..+ .. +....
T Consensus 244 ~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (366)
T TIGR00886 244 VSSIFAMFFKDQFGLSKVTA--GAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVF 321 (366)
T ss_pred HHHHHHHHHHHHcCCcHHHH--HHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHH
Confidence 344455454 4567765554 78888888889999999999999999998887777666555544433 22 55555
Q ss_pred HHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHH
Q 022133 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLG 189 (302)
Q Consensus 145 ~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g 189 (302)
.+...+.+++.|...+....++++.+| +++|...|+.+....+|
T Consensus 322 ~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 322 IVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 555556666666666677788888887 68999999987766554
No 223
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.65 E-value=7.3e-07 Score=83.20 Aligned_cols=149 Identities=15% Similarity=0.172 Sum_probs=110.4
Q ss_pred hhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhh-hhHHHHHHHHHHHHHHHHHHHhhcch--------hHHHH
Q 022133 75 ESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMIIGASISATTRN--------LIGML 145 (302)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~Grr~~~~~~~~~~~i~~~~~~~~~~--------~~~~~ 145 (302)
..+.+.+|++.+.+ ..+...+....-+..+++|+++|+ +||++.++++.++..++..+.++... ....+
T Consensus 12 lYl~~~lg~~~~~A--~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l 89 (654)
T TIGR00926 12 LYFLNFLGFSESTS--TVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDL 89 (654)
T ss_pred HHHHHHcCCcHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHH
Confidence 33445567765554 455666666666888899999995 79999999999999888887765421 23355
Q ss_pred HHHHHHhhhhcchhhhHHHHhhhcCCCCc---cchhHhHHHHHHHHHHHHHHHHhhccccc-------CcchHHHHHHhH
Q 022133 146 LGRFVVGTGMGLGPTVAALYVTEVSPPFV---RGTYGAFIQIATCLGLMGSLLIGIPVKEI-------AGWWRICFWVSI 215 (302)
Q Consensus 146 ~~r~~~g~~~~~~~~~~~~~~~e~~p~~~---R~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~g~w~~~~~~~~ 215 (302)
++-.+..+|.|+.-+...+...|.++.++ |-.+..++..+.++|+++++.+.+++.+. .+ |...|.+.+
T Consensus 90 ~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~-~~~aF~i~~ 168 (654)
T TIGR00926 90 LGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDC-YPLAFGVPA 168 (654)
T ss_pred HHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcc-hHHHHHHHH
Confidence 67788889999999999999999997653 55667777788889999998888877633 24 888888877
Q ss_pred HHHHHHHHHhh
Q 022133 216 VPAAILCLAMV 226 (302)
Q Consensus 216 ~~~~~~~~~~~ 226 (302)
+..+++++...
T Consensus 169 i~m~ia~lvf~ 179 (654)
T TIGR00926 169 ILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHH
Confidence 77776655543
No 224
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.61 E-value=1.5e-06 Score=79.00 Aligned_cols=110 Identities=10% Similarity=0.030 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHHH-------HHHHHHHHHHHHHHHh-----hc-----chhHHHHHHHHHHhh
Q 022133 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRA-------FQLCALPMIIGASISA-----TT-----RNLIGMLLGRFVVGT 153 (302)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~-------~~~~~~~~~i~~~~~~-----~~-----~~~~~~~~~r~~~g~ 153 (302)
+++.+...+..++..++.+++.||+|+|+. +.+|+++.+++.+..+ .. .+.+.++...++.|+
T Consensus 312 ~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~ 391 (489)
T PRK10207 312 VSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSL 391 (489)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 456666556677888999999999999973 6677777666654321 11 246667788999999
Q ss_pred hhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcc
Q 022133 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (302)
Q Consensus 154 ~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~ 200 (302)
|.+...+....++.+..|++.+|.++|+++....+|..++..++...
T Consensus 392 Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 392 GELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999998888877544
No 225
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.61 E-value=1e-06 Score=75.60 Aligned_cols=155 Identities=14% Similarity=0.130 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHHhhhhccchhhhhhhhh-cccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHH
Q 022133 52 HVLVATLSSFLFGYHLGVVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMII 130 (302)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i 130 (302)
......++.|++--....+..+++.+..+ .|.+..+. +...+.+..+.++|.+++.++..|+...+.+.+..++..+
T Consensus 237 ~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~a--a~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~il 314 (422)
T COG0738 237 HLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQA--AYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAIL 314 (422)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 34555566666544455566777777776 55555544 7888999999999999999999999999999999988888
Q ss_pred HHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHH
Q 022133 131 GASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRIC 210 (302)
Q Consensus 131 ~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~ 210 (302)
.++..++.++...+ .+-++.|+.++..+|...+...+..| ++-.. .+..-....+|+.+.|.+.|++.+..| -...
T Consensus 315 l~~~~~l~~g~v~~-~~l~~ig~F~simfPTIfslal~~l~-~~ts~-~s~~l~maivGGAiiP~l~G~i~d~~g-~~~~ 390 (422)
T COG0738 315 LLLAVALIGGVVAL-YALFLIGLFNSIMFPTIFSLALKNLG-EHTSV-GSGLLVMAIVGGAIIPPLQGVIADMFG-IQLT 390 (422)
T ss_pred HHHHHHHhcChHHH-HHHHHHHHHhHHHHHHHHHHHHhccC-ccccc-cceeeeeheecchHHHHHHHHHHHhhh-hHHH
Confidence 88888888886654 45678889999999999999999998 33333 333334556788899999999999887 3444
Q ss_pred HH
Q 022133 211 FW 212 (302)
Q Consensus 211 ~~ 212 (302)
+.
T Consensus 391 ~~ 392 (422)
T COG0738 391 FL 392 (422)
T ss_pred HH
Confidence 44
No 226
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.61 E-value=1.7e-07 Score=79.95 Aligned_cols=162 Identities=17% Similarity=0.081 Sum_probs=116.1
Q ss_pred HHHHHHHHHhhhhccchhhhhhhh-hcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhh--HHHHHHHHHHHHHHHH
Q 022133 56 ATLSSFLFGYHLGVVNEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG--RRRAFQLCALPMIIGA 132 (302)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~G--rr~~~~~~~~~~~i~~ 132 (302)
+....-..+......-+.++.+.. .+. .+....|....-..+.+++++.+.|.++||++ |......+++...+++
T Consensus 275 ~agai~~~n~~lafLePtlslwm~e~m~--~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~ 352 (464)
T KOG3764|consen 275 IAGAITFSNSSLAFLEPTLSLWMLETMF--TPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSS 352 (464)
T ss_pred hhcchhhccchHHHhCcccHHHHHHhcc--CCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHh
Confidence 333333334444556666665444 343 23333366666677888999999999999999 6555566666666777
Q ss_pred HHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCC------ccchhHhHHHHHHHHHHHHHHHHhhcccccCcc
Q 022133 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPF------VRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW 206 (302)
Q Consensus 133 ~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~------~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 206 (302)
....+++++..+.+-++..+++.+.........+.++...+ ..|...++...++++|.++||.+++.+.+..|
T Consensus 353 ~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iG- 431 (464)
T KOG3764|consen 353 GPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIG- 431 (464)
T ss_pred chhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehh-
Confidence 77778899999999999989888877766665555555433 45678889999999999999999999999998
Q ss_pred hHHHHHHhHHHHHH
Q 022133 207 WRICFWVSIVPAAI 220 (302)
Q Consensus 207 w~~~~~~~~~~~~~ 220 (302)
.+|.-.+.++..++
T Consensus 432 F~wl~~iig~~n~i 445 (464)
T KOG3764|consen 432 FEWLMTIIGILNLI 445 (464)
T ss_pred HHHHHHHHHHHHHH
Confidence 67766655555444
No 227
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.54 E-value=4.7e-06 Score=74.94 Aligned_cols=180 Identities=13% Similarity=0.017 Sum_probs=119.3
Q ss_pred HHHHHHHHHHHHHhhhhccchhhhhhhhh--cccCCcc---hh-----hHHHHHHHHHHHHHHHHHHHhhhhhhh-HHHH
Q 022133 52 HVLVATLSSFLFGYHLGVVNEPLESISLD--LGFNGNT---LA-----EGLVVSMCLGGAFIGSTLSGWIADGVG-RRRA 120 (302)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~-----~~~~~~~~~~~~~i~~~~~g~l~d~~G-rr~~ 120 (302)
.+..+++..++..+....+..+.+.+..+ ++-+++. .+ -.+....+.+...+.+++..++.+++| ||+.
T Consensus 259 ~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~ 338 (477)
T TIGR01301 259 PVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRL 338 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhH
Confidence 44555556665555554444444433321 2222111 11 123444455555677788888999998 5777
Q ss_pred HHHHHHHHHHHHHHHhhcch---------------------hHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCC--ccch
Q 022133 121 FQLCALPMIIGASISATTRN---------------------LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPF--VRGT 177 (302)
Q Consensus 121 ~~~~~~~~~i~~~~~~~~~~---------------------~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~--~R~~ 177 (302)
..++.++.+++.+.+.+..+ ....++...+.|+..+..+.+.++++++..|.+ ..|.
T Consensus 339 ~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~ 418 (477)
T TIGR01301 339 WGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGL 418 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcc
Confidence 78888888777776654322 356677788999999999999999999999964 4488
Q ss_pred hHhHHHHHHHHHHHHHHHHhhcccccCc-chHHHHHHhHHHHHHHHHH-hhccCCC
Q 022133 178 YGAFIQIATCLGLMGSLLIGIPVKEIAG-WWRICFWVSIVPAAILCLA-MVFCAES 231 (302)
Q Consensus 178 ~~~~~~~~~~~g~~~~~~~~~~~~~~~g-~w~~~~~~~~~~~~~~~~~-~~~~pe~ 231 (302)
.+|+.|.+..+..++..+..+.+.+..| .-.+.+.++++..+++.+. ++.+|.+
T Consensus 419 ~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~ 474 (477)
T TIGR01301 419 SMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRP 474 (477)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999998888877666444333 2356777777777776554 4557765
No 228
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.51 E-value=7.5e-06 Score=62.03 Aligned_cols=108 Identities=17% Similarity=0.087 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCC
Q 022133 92 LVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSP 171 (302)
Q Consensus 92 ~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p 171 (302)
...++......+++++.+.+.+++|.|+.+++|.++..+-.... +-++.+.++.+-.+.|++.+..++....++.+...
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~ 119 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYST 119 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCC
Confidence 34455566678888999999999999999999999888655544 45667788899999999999999999999999999
Q ss_pred CCccchhHhHHHHHHHHHHHHHHHHhhcc
Q 022133 172 PFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (302)
Q Consensus 172 ~~~R~~~~~~~~~~~~~g~~~~~~~~~~~ 200 (302)
++.|++..+++-.....+.++|.++...+
T Consensus 120 ~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 120 EETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987777777777777665544
No 229
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.49 E-value=1.1e-05 Score=71.84 Aligned_cols=140 Identities=16% Similarity=0.143 Sum_probs=83.7
Q ss_pred cchhhhhhhhh-cccCCcchhhHHHHHHHHHHHHHHHHHHHhhh-hhhhHHHHHHHHHHHHHHHHHHHh-----hcchhH
Q 022133 70 VNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIA-DGVGRRRAFQLCALPMIIGASISA-----TTRNLI 142 (302)
Q Consensus 70 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~-d~~Grr~~~~~~~~~~~i~~~~~~-----~~~~~~ 142 (302)
.....|.+.++ +|.+..+. ++.......+..++..+.+.+. |+.++|. +.....+..++..+.. ..+++.
T Consensus 237 ~~~~~P~~l~~~~g~s~~~~--gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~-~~~~~~~~~ig~~l~~~~~~~~~~~~~ 313 (413)
T PRK15403 237 WVAVSPVILIDAGGMTTSQF--AWTQVPVFGAVIVANAIVARFVKDPTEPRF-IWRAVPIQLVGLALLIVGNLLWPHVWL 313 (413)
T ss_pred HHHhChHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCchhH-HHHHHHHHHHHHHHHHHHHHHccccHH
Confidence 33455655544 46665555 7777767777778888777765 5555443 2222222222222221 123343
Q ss_pred HHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhH
Q 022133 143 GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSI 215 (302)
Q Consensus 143 ~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~ 215 (302)
..++..++.++|.+...+......- .-....+|++.++++.....+...++..++++..... ...|.+..
T Consensus 314 ~~~~~~~l~~~G~~~~~p~~~~~al-~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~ 383 (413)
T PRK15403 314 WSVLGTSLYAFGIGLIFPTLFRFTL-FSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGG--RLPFHLLA 383 (413)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHh-ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--chHHHHHH
Confidence 4566777888888877766654332 2223358999999988888888888888888766643 45554433
No 230
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.48 E-value=9.6e-06 Score=70.14 Aligned_cols=134 Identities=16% Similarity=0.082 Sum_probs=94.4
Q ss_pred hhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhh-----HHHHHHHHH-HHHHHHHHHHhh-----cc------
Q 022133 77 ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG-----RRRAFQLCA-LPMIIGASISAT-----TR------ 139 (302)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~G-----rr~~~~~~~-~~~~i~~~~~~~-----~~------ 139 (302)
+..|++++.. ..+.+.+...+. ....+.+|+.||+.+ ||..+++.. ...+.+..+..+ ..
T Consensus 6 MIvEL~vpA~--lv~~lval~~~~-ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~ 82 (403)
T PF03209_consen 6 MIVELGVPAW--LVALLVALHYLV-APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSS 82 (403)
T ss_pred HHHHhccHHH--HHHHHHHHHHHH-HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 3445665432 335555655554 357899999999999 887776554 444444433332 12
Q ss_pred --hh---HHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHH
Q 022133 140 --NL---IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (302)
Q Consensus 140 --~~---~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~ 213 (302)
.+ ....+...+.|+|.+...+...++++|..|+++|++..++.-....+|.+++..+.+.+.+..+.-|..-.+
T Consensus 83 ~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~ 161 (403)
T PF03209_consen 83 GPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVI 161 (403)
T ss_pred cccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHH
Confidence 22 233455778899999999999999999999999999999988888899999999999887766644444333
No 231
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.47 E-value=4.9e-06 Score=76.31 Aligned_cols=145 Identities=16% Similarity=0.085 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHhhhhccchhhhhhhh-hcccCCcc-hhhHHHHHHHHHHHHHHHHHHHhhhhhhhH-HHHHHHHHHHH
Q 022133 52 HVLVATLSSFLFGYHLGVVNEPLESISL-DLGFNGNT-LAEGLVVSMCLGGAFIGSTLSGWIADGVGR-RRAFQLCALPM 128 (302)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~g~l~d~~Gr-r~~~~~~~~~~ 128 (302)
.+....+..+..+........+.|.... -++-+... ...++......++..+|+.+.|.+..+++| |..++++.+++
T Consensus 311 ~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ 390 (599)
T PF06609_consen 311 GFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLM 390 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHH
Confidence 3444445555555555444444444332 33332211 123677778888888999999999988877 55556777666
Q ss_pred HHHHHHHhh--cchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHH
Q 022133 129 IIGASISAT--TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLI 196 (302)
Q Consensus 129 ~i~~~~~~~--~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~ 196 (302)
.+++.+++. .+|....+..-++.|++.|...........-..|.+.-|.+.++......+|+.++..+
T Consensus 391 ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aI 460 (599)
T PF06609_consen 391 TAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAI 460 (599)
T ss_pred HHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHH
Confidence 655544443 24555566778899999998887777777788899999999998888877777666543
No 232
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.42 E-value=8.7e-06 Score=73.48 Aligned_cols=158 Identities=16% Similarity=0.056 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHhhhhccchhhhhhhhh-cccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhh----hhHHHHHHHHHHH
Q 022133 53 VLVATLSSFLFGYHLGVVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGRRRAFQLCALP 127 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~----~Grr~~~~~~~~~ 127 (302)
++...+..+......+.+..++|.+.++ .|++..+. +.+.+.+.++.+++.+++|+++|| ..+|..+...+.+
T Consensus 275 vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a--~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~ 352 (495)
T KOG2533|consen 275 VWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQA--NLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCL 352 (495)
T ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHh--ccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 4556666677777777788899999888 33544444 788899999999999999999999 7777777777666
Q ss_pred HHHHH-HHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccch-hHhHHHHHHHHHHHHHHH-HhhcccccC
Q 022133 128 MIIGA-SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGT-YGAFIQIATCLGLMGSLL-IGIPVKEIA 204 (302)
Q Consensus 128 ~~i~~-~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~-~~~~~~~~~~~g~~~~~~-~~~~~~~~~ 204 (302)
..+.. .......+......+.+....+.+...+......++....+.|.. ..+....+.+.++.++|. ..+......
T Consensus 353 ~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y 432 (495)
T KOG2533|consen 353 YAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRY 432 (495)
T ss_pred HHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcch
Confidence 54443 444334334433333344444445555566666666665555444 344444555555444443 333334444
Q ss_pred cchHHHHHH
Q 022133 205 GWWRICFWV 213 (302)
Q Consensus 205 g~w~~~~~~ 213 (302)
+ |...|++
T Consensus 433 ~-~~~~f~~ 440 (495)
T KOG2533|consen 433 G-WGAVFYM 440 (495)
T ss_pred h-hhhHHHH
Confidence 4 6667644
No 233
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.41 E-value=1.9e-05 Score=71.33 Aligned_cols=144 Identities=17% Similarity=0.119 Sum_probs=98.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH-HHHHHHHHhhc--chhHHHHHHHHHHhhhhcchhhhHHHHh
Q 022133 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP-MIIGASISATT--RNLIGMLLGRFVVGTGMGLGPTVAALYV 166 (302)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~-~~i~~~~~~~~--~~~~~~~~~r~~~g~~~~~~~~~~~~~~ 166 (302)
.++..++..+..++..|+.|.++|+-|+|+.++....+ .+++++.+.+. .++....+..++..++.+.......+++
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~L 151 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYL 151 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35777888888999999999999999877776655444 44555555542 3455555566666778888888889999
Q ss_pred hhcCCCCcc--------------------------chhHhHHHHHHHHHHHHHHHHhhcccccCc-------chHHHHHH
Q 022133 167 TEVSPPFVR--------------------------GTYGAFIQIATCLGLMGSLLIGIPVKEIAG-------WWRICFWV 213 (302)
Q Consensus 167 ~e~~p~~~R--------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g-------~w~~~~~~ 213 (302)
.|+.+++.+ ++..+.-.....+|+++..++...+....+ ..|..+.+
T Consensus 152 P~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~ 231 (477)
T PF11700_consen 152 PDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLI 231 (477)
T ss_pred HhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHH
Confidence 999999888 888888666666776666555444322111 14666666
Q ss_pred hHHHHH-HHHHHhhccCCChH
Q 022133 214 SIVPAA-ILCLAMVFCAESPH 233 (302)
Q Consensus 214 ~~~~~~-~~~~~~~~~pe~~~ 233 (302)
.++.-+ ..+...+++||.|+
T Consensus 232 ~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 232 VALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHHHHHHHhCCCCCC
Confidence 655544 44555667888754
No 234
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.40 E-value=1.4e-06 Score=58.19 Aligned_cols=80 Identities=18% Similarity=0.164 Sum_probs=71.6
Q ss_pred HHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhH
Q 022133 63 FGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLI 142 (302)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~ 142 (302)
.++..+.+.+.+|.+.++.+++.++. |++.+...+|+.+|.+...++.++..+++.+..+.+...+..+.+++.++.+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~a--g~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~ 81 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQA--GWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFW 81 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 45667778899999999999988877 8999999999999999999999998889999999999999999999888776
Q ss_pred HH
Q 022133 143 GM 144 (302)
Q Consensus 143 ~~ 144 (302)
.+
T Consensus 82 ~w 83 (85)
T PF06779_consen 82 LW 83 (85)
T ss_pred HH
Confidence 54
No 235
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.38 E-value=2.7e-06 Score=72.80 Aligned_cols=91 Identities=20% Similarity=0.191 Sum_probs=74.1
Q ss_pred hcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccC------------
Q 022133 137 TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA------------ 204 (302)
Q Consensus 137 ~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------------ 204 (302)
...++..+++..++.|.|.+...+....+++++.|++.+.+.+++.+.++++|.+++|++++.+....
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 34688999999999999999999999999999999999999999999999999999999999776321
Q ss_pred ---cchHHHHHHhHHHHHHHHHHhhc
Q 022133 205 ---GWWRICFWVSIVPAAILCLAMVF 227 (302)
Q Consensus 205 ---g~w~~~~~~~~~~~~~~~~~~~~ 227 (302)
..|+++|++.+...++..+.+.+
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~ 111 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAF 111 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 24888888554443433333333
No 236
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.35 E-value=3e-05 Score=67.11 Aligned_cols=146 Identities=15% Similarity=0.196 Sum_probs=112.2
Q ss_pred hhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhh-hhhHHHHHHHHHHHHHHHHHHH---hhcchhHHHHHHHHHHhh
Q 022133 78 SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD-GVGRRRAFQLCALPMIIGASIS---ATTRNLIGMLLGRFVVGT 153 (302)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d-~~Grr~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~r~~~g~ 153 (302)
.+-+|++..+. ..++.....|..+|....|++.. |.++++.-.+++.+.+++..+. +...+.+.+...-++.|+
T Consensus 236 g~Vfgmsv~eT--T~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~ 313 (403)
T PF03209_consen 236 GEVFGMSVGET--TRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGL 313 (403)
T ss_pred hHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 44578887776 58888899999999999998776 7788887777777766665543 345678888899999999
Q ss_pred hhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccC---------cchHHHHHHhHHHHHHHHHH
Q 022133 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA---------GWWRICFWVSIVPAAILCLA 224 (302)
Q Consensus 154 ~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---------g~w~~~~~~~~~~~~~~~~~ 224 (302)
+.|.........+-++..+++-|..+|.+.....++..++.++++.+.|.. ..|..+|.+.++..+.++++
T Consensus 314 g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~l 393 (403)
T PF03209_consen 314 GNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVL 393 (403)
T ss_pred hhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHH
Confidence 999998888899999999999999999999999888888888888765421 12555666655555554444
Q ss_pred h
Q 022133 225 M 225 (302)
Q Consensus 225 ~ 225 (302)
.
T Consensus 394 l 394 (403)
T PF03209_consen 394 L 394 (403)
T ss_pred H
Confidence 3
No 237
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.34 E-value=2.1e-06 Score=56.79 Aligned_cols=68 Identities=24% Similarity=0.342 Sum_probs=55.7
Q ss_pred HHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH
Q 022133 58 LSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (302)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~ 127 (302)
...++.....+.+.|+.+.+.++.|++..+. |.+.++..+...++++++|.++||+|+++.++....+
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~i--Gil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQLGLSPSQI--GILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 3344445556678889999999989887766 9999999999999999999999999998887766554
No 238
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.33 E-value=6.9e-06 Score=73.55 Aligned_cols=154 Identities=18% Similarity=0.173 Sum_probs=111.4
Q ss_pred hhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhh-----hHHHHHHHHHHHHHHHHHHHhhc----chhHH
Q 022133 73 PLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-----GRRRAFQLCALPMIIGASISATT----RNLIG 143 (302)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-----Grr~~~~~~~~~~~i~~~~~~~~----~~~~~ 143 (302)
..+.+.+++|++..+. ....+...+.. ..-++.|.++|-+ .||+-++++.++.+++.+..+.. .+...
T Consensus 12 ~~~~l~~~l~ls~~~~--~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQL--QRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHHcCCCHHHH--HHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 4456778899887765 45555555554 4568999999986 36777777777776655555543 24556
Q ss_pred HHHHHHHHhhhhcchhhhHHHHhhhcCCC--CccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHH
Q 022133 144 MLLGRFVVGTGMGLGPTVAALYVTEVSPP--FVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAIL 221 (302)
Q Consensus 144 ~~~~r~~~g~~~~~~~~~~~~~~~e~~p~--~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~ 221 (302)
..++-++..+|......+.-+++.|.... +.||...+.......+|.+++..++|.+.+..+ ++..|.+.++..++.
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~-~~~~f~i~~~~~~l~ 167 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG-PQGVFLISAALPLLM 167 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC-CeEEehHHHHHHHHH
Confidence 66677788888888888899999998732 337788888888899999999999999988887 688888776665555
Q ss_pred HHHhhc-cCC
Q 022133 222 CLAMVF-CAE 230 (302)
Q Consensus 222 ~~~~~~-~pe 230 (302)
.+..++ .+|
T Consensus 168 ~~~~~~~~~e 177 (433)
T PF03092_consen 168 LIVALFLLEE 177 (433)
T ss_pred HHHHHHhhhh
Confidence 444444 444
No 239
>PTZ00207 hypothetical protein; Provisional
Probab=98.27 E-value=2e-05 Score=72.68 Aligned_cols=174 Identities=13% Similarity=-0.024 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHhhhhccchhhhhhhhhc-ccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHH--------HHHHH
Q 022133 53 VLVATLSSFLFGYHLGVVNEPLESISLDL-GFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRR--------RAFQL 123 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr--------~~~~~ 123 (302)
++++.+..++..-...++..-+.++.+.+ |.+.+.......+++..+++++|.+.+|+++...-+| +..+.
T Consensus 355 ~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~ 434 (591)
T PTZ00207 355 LWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALF 434 (591)
T ss_pred HHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHH
Confidence 44444444443333333444566677777 6633331102378888999999999999988322222 22222
Q ss_pred HHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHH-HHHhhcccc
Q 022133 124 CALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGS-LLIGIPVKE 202 (302)
Q Consensus 124 ~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~-~~~~~~~~~ 202 (302)
...++.++.+++++.-....+++.-++.|++.|..+++....++|+|. ++-|+-.-+...+..+|+.+- ..+.|.+.+
T Consensus 435 ~~~~~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd 513 (591)
T PTZ00207 435 IPSVCIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYT 513 (591)
T ss_pred HHHHHHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHH
Confidence 222255555555555333688999999999999999999999999999 888888888888888886654 566776654
Q ss_pred cC----cc--------hHHHHHHhHHHHHHHHHHhhc
Q 022133 203 IA----GW--------WRICFWVSIVPAAILCLAMVF 227 (302)
Q Consensus 203 ~~----g~--------w~~~~~~~~~~~~~~~~~~~~ 227 (302)
.. +. .+..|++.+..++.+++....
T Consensus 514 ~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~ 550 (591)
T PTZ00207 514 QQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTY 550 (591)
T ss_pred HHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhh
Confidence 32 11 567777776666666554433
No 240
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.16 E-value=0.00034 Score=62.87 Aligned_cols=111 Identities=6% Similarity=-0.080 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHH-HHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc--c----------------------------
Q 022133 91 GLVVSMCLGGAFIG-STLSGWIADGVGRRRAFQLCALPMIIGASISATT--R---------------------------- 139 (302)
Q Consensus 91 ~~~~~~~~~~~~i~-~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~--~---------------------------- 139 (302)
.++-+...+...+. .++.+++++|++|++++-+.........+++++. +
T Consensus 46 ~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~ 125 (472)
T TIGR00769 46 PFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAI 125 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHH
Confidence 67777676666555 8899999999999999876665555544444332 1
Q ss_pred -hhHHHHHHHHHHhhhhcchhh-hHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhccc
Q 022133 140 -NLIGMLLGRFVVGTGMGLGPT-VAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (302)
Q Consensus 140 -~~~~~~~~r~~~g~~~~~~~~-~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~ 201 (302)
+.|...+..+...+-.....+ +.+.++.|.+..++-.+..++...+.++|.++++.+..++.
T Consensus 126 ~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 126 LRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012222333344443444444 77889999999999999999999999999999998877765
No 241
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.07 E-value=0.00014 Score=65.86 Aligned_cols=110 Identities=18% Similarity=0.144 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHH------HH-HHHHHHHHHHHHHHHhhc---------chhHHHHHHHHHHhhh
Q 022133 91 GLVVSMCLGGAFIGSTLSGWIADGVGRR------RA-FQLCALPMIIGASISATT---------RNLIGMLLGRFVVGTG 154 (302)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr------~~-~~~~~~~~~i~~~~~~~~---------~~~~~~~~~r~~~g~~ 154 (302)
+|..+.-.+..++.+|+.+++=.|.+|| +. +.+|+++.+++.+.+.+. .+..++++..+++++|
T Consensus 311 ~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~g 390 (493)
T PRK15462 311 AMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFA 390 (493)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHH
Confidence 5777877777777888777775555321 11 456677766666554321 2566788889999999
Q ss_pred hcchhhhHHHHhhhcCCCCccchhHhHHHHH-HHHHHHHHHHHhhcc
Q 022133 155 MGLGPTVAALYVTEVSPPFVRGTYGAFIQIA-TCLGLMGSLLIGIPV 200 (302)
Q Consensus 155 ~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~-~~~g~~~~~~~~~~~ 200 (302)
.-...|+..++++++.|++.||..+|.+... ..+|..++..++...
T Consensus 391 El~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 391 ELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998664 467777777666655
No 242
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.96 E-value=0.00013 Score=62.49 Aligned_cols=122 Identities=14% Similarity=0.054 Sum_probs=102.2
Q ss_pred hhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhh--HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhc
Q 022133 79 LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG--RRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMG 156 (302)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~G--rr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~ 156 (302)
..+|++.. ++|-+.+...++..+.+....+..||.. -+-.+..++.+..-..++.+..+....+..+-.+-.+..+
T Consensus 290 ~rfg~ss~--~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A 367 (451)
T KOG2615|consen 290 GRFGYSSM--QQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTA 367 (451)
T ss_pred CccCCChh--hheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHH
Confidence 34555544 4488888888888888988899999987 6777777777777777777888888888888888888888
Q ss_pred chhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccc
Q 022133 157 LGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (302)
Q Consensus 157 ~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 202 (302)
...+....++....|.++||..+|+.....+++-++||+++|.+..
T Consensus 368 ~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 368 SVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 8888889999999999999999999999999999999999977654
No 243
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.93 E-value=1.6e-05 Score=69.32 Aligned_cols=145 Identities=12% Similarity=0.129 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhh----hhHHHHHHHHH-HHH
Q 022133 54 LVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGRRRAFQLCA-LPM 128 (302)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~----~Grr~~~~~~~-~~~ 128 (302)
+.+....+...+....-..+++++..+.|++..-. +.+..+.-+...+.+++.|..+|| +|||+.++... ...
T Consensus 35 i~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~--S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i 112 (498)
T KOG0637|consen 35 ISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWS--SIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLI 112 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccc--cccccccccccceecccccccccccccccccccchHHHhhHHH
Confidence 33333333334444444456666777788765543 455555555667889999999996 78887776554 445
Q ss_pred HHHHHHHhhcch-----------------hHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccch-hHhHHHHHHHHHH
Q 022133 129 IIGASISATTRN-----------------LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGT-YGAFIQIATCLGL 190 (302)
Q Consensus 129 ~i~~~~~~~~~~-----------------~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~-~~~~~~~~~~~g~ 190 (302)
.++.++.+++.+ ...++++..+.=++.-.....+-+++.|++..+++.+ +.+++..+.++|+
T Consensus 113 ~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGn 192 (498)
T KOG0637|consen 113 AVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGN 192 (498)
T ss_pred HHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcc
Confidence 666666665432 2233444445556666777788899999998887777 9999999999999
Q ss_pred HHHHHHhhcc
Q 022133 191 MGSLLIGIPV 200 (302)
Q Consensus 191 ~~~~~~~~~~ 200 (302)
.+|..++++.
T Consensus 193 vLGY~~g~y~ 202 (498)
T KOG0637|consen 193 VLGYALGSYL 202 (498)
T ss_pred eeeeeccccc
Confidence 9998888743
No 244
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.82 E-value=0.00019 Score=63.12 Aligned_cols=109 Identities=11% Similarity=0.145 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHHHHHhhc---ch------hHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCc---cchhHhHHHHHH
Q 022133 119 RAFQLCALPMIIGASISATT---RN------LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFV---RGTYGAFIQIAT 186 (302)
Q Consensus 119 ~~~~~~~~~~~i~~~~~~~~---~~------~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~---R~~~~~~~~~~~ 186 (302)
++++++.++.++|.++..++ .. ...++++.++.++|.|+.-+....+.+|.++++. |.....++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 45677888888887774332 22 3678888999999999999999999999998763 455666788999
Q ss_pred HHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhhcc
Q 022133 187 CLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFC 228 (302)
Q Consensus 187 ~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~ 228 (302)
++|.++++.+.+++.++.+ |.+.|.+..+..+++++.++.-
T Consensus 82 n~G~~~~~~~~~~i~~~~~-~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYG-WFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccc-hhhhhhHHHHHHHHHHHHHHhC
Confidence 9999999999999998888 8999999888877777665543
No 245
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.80 E-value=0.00063 Score=61.15 Aligned_cols=122 Identities=16% Similarity=0.105 Sum_probs=101.9
Q ss_pred hhhhcccCCcchhhHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhh
Q 022133 77 ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSG-WIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGM 155 (302)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g-~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~ 155 (302)
....++++..+. +...+.......+++.+.. .+...+|-|+.+..|+....+..++.+++.+.++++....+.++.
T Consensus 268 l~~~f~w~~~~~--s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~- 344 (463)
T KOG2816|consen 268 LKAKFGWNKKEF--SDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA- 344 (463)
T ss_pred EeeecCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh-
Confidence 445577777666 7777777777788887766 788889999999999999999999999999999888877777764
Q ss_pred cchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhccc
Q 022133 156 GLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (302)
Q Consensus 156 ~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~ 201 (302)
+...+...++++-+..++++|+..++......+..+++|.+.+.+.
T Consensus 345 ~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 345 GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 4556788899999999999999999999999999999888877664
No 246
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.61 E-value=0.0011 Score=58.00 Aligned_cols=108 Identities=16% Similarity=0.137 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH---HHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhh
Q 022133 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS---ISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVT 167 (302)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~ 167 (302)
.+...++.+|..++.--...+ |+-|-+++.+-.++..+..+ +.-+.++.+.+++..+..|+..|..+.-....+.
T Consensus 284 ~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~ 361 (402)
T PF02487_consen 284 RWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRIS 361 (402)
T ss_pred HHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 567777777776665433222 34232222222222222222 2334578888888899999999999999999999
Q ss_pred hcCCCCccchhHhHHHHHHHHHHHHHHHHhhcc
Q 022133 168 EVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (302)
Q Consensus 168 e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~ 200 (302)
|-.|+++|..+++....+.++|..++.+++-.+
T Consensus 362 ~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 362 EEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred hcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 999999999999999999999999998887654
No 247
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.59 E-value=0.0025 Score=55.57 Aligned_cols=96 Identities=17% Similarity=0.059 Sum_probs=69.7
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH-HHHHHHHHHhhcc---hhHHHHHHHHHHhhhhcchhhh
Q 022133 86 NTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL-PMIIGASISATTR---NLIGMLLGRFVVGTGMGLGPTV 161 (302)
Q Consensus 86 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~-~~~i~~~~~~~~~---~~~~~~~~r~~~g~~~~~~~~~ 161 (302)
.+..++...++..+..++-.|+.|.++|+.|+|+..+.... +..++.+...+.+ .+...++...+..++.......
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 34445778888888889999999999999997766654443 4444444444443 3455566677788888888888
Q ss_pred HHHHhhhcCCCCccchhHhH
Q 022133 162 AALYVTEVSPPFVRGTYGAF 181 (302)
Q Consensus 162 ~~~~~~e~~p~~~R~~~~~~ 181 (302)
..+++.++.+++.-++..++
T Consensus 136 yds~L~~~~~k~~~~riS~l 155 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGL 155 (438)
T ss_pred hhhHhhhhcCccccCccccc
Confidence 88999999998776666555
No 248
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.58 E-value=0.0039 Score=57.62 Aligned_cols=154 Identities=18% Similarity=0.278 Sum_probs=109.9
Q ss_pred cchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhh-hhHHHHHHHHHHHHHHHHHHHhhc-------c--
Q 022133 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMIIGASISATT-------R-- 139 (302)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~Grr~~~~~~~~~~~i~~~~~~~~-------~-- 139 (302)
....+.++..+++.+...+ .-..+.+.-......+++++++|- +||-+++.++.++..++..+..+. +
T Consensus 57 ~~nlv~ylt~~~~~~~~~a--a~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~ 134 (571)
T KOG1237|consen 57 VSNLVTYLTLELHASGGGA--ANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFM 134 (571)
T ss_pred hhHHHHHHHHHhccchHHH--HHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc
Confidence 4556666777777765433 455666666667788899999996 599999988888877775433221 0
Q ss_pred -------------h---hHHHHHHHHHHhhhhcchhhhHHHHhhhcCC---CC-ccc--hhHhHHHHHHHHHHHHHHHHh
Q 022133 140 -------------N---LIGMLLGRFVVGTGMGLGPTVAALYVTEVSP---PF-VRG--TYGAFIQIATCLGLMGSLLIG 197 (302)
Q Consensus 140 -------------~---~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p---~~-~R~--~~~~~~~~~~~~g~~~~~~~~ 197 (302)
+ ...+.....+..+|.|+.-+....+-+|-++ ++ .+. ..+.++.....+|..++..+-
T Consensus 135 ~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~ 214 (571)
T KOG1237|consen 135 CKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVL 214 (571)
T ss_pred ccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHH
Confidence 1 2356666778888999999999999999998 32 223 556677788888888888887
Q ss_pred hcccccCcchHHHHHHhHHHHHHHHHHhh
Q 022133 198 IPVKEIAGWWRICFWVSIVPAAILCLAMV 226 (302)
Q Consensus 198 ~~~~~~~g~w~~~~~~~~~~~~~~~~~~~ 226 (302)
.++-++.+ |.+.|.+..+..++++++++
T Consensus 215 vyiq~~~~-w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 215 VYIQDNVG-WKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred Hhhhhccc-ceeeccHHHHHHHHHHHHHH
Confidence 77767777 89988887666666655543
No 249
>PRK03612 spermidine synthase; Provisional
Probab=97.52 E-value=0.011 Score=54.23 Aligned_cols=138 Identities=13% Similarity=0.004 Sum_probs=76.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH-H-HHHHH-HHHh---hcch-hHHHHHHHHHHhhhhcchh
Q 022133 87 TLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL-P-MIIGA-SISA---TTRN-LIGMLLGRFVVGTGMGLGP 159 (302)
Q Consensus 87 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~-~-~~i~~-~~~~---~~~~-~~~~~~~r~~~g~~~~~~~ 159 (302)
...++.+.+++..|.++|+.+++++.++.-|+...+-..+ + ..++. ++.. +... ...++...++.++..|+..
T Consensus 49 ~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 128 (521)
T PRK03612 49 VTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEI 128 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344789999999999999999988754433332221111 1 01111 1111 1111 1122334456677788887
Q ss_pred hhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhccc-ccCcchHHHHHHhHHHHHHHHHHh
Q 022133 160 TVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK-EIAGWWRICFWVSIVPAAILCLAM 225 (302)
Q Consensus 160 ~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~g~w~~~~~~~~~~~~~~~~~~ 225 (302)
|....+..+... +.-+...|-......+|+++|.++.+++. ...|..+..+.++.+..+++++.+
T Consensus 129 Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~ 194 (521)
T PRK03612 129 PLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFL 194 (521)
T ss_pred HHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 777666654322 22345667777778888888888877654 355545565555544444443333
No 250
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.46 E-value=0.0039 Score=53.70 Aligned_cols=151 Identities=13% Similarity=0.106 Sum_probs=96.2
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhh-----hhhHHHH
Q 022133 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD-----GVGRRRA 120 (302)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d-----~~Grr~~ 120 (302)
.|...+.+..+.+.+.+++.-.+... .+|.+.+.-|.|.+.. +....++ .- .---++|.++.| |+|||+.
T Consensus 26 ~~~d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~--a~fS~ay-~P-~sLKllWaPiVDs~y~k~~Grrks 100 (510)
T KOG3574|consen 26 LKGDRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQ--AIFSFAY-WP-FSLKLLWAPIVDSVYSKRFGRRKS 100 (510)
T ss_pred hhhhhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhh--hhhhhhh-hH-HHHHHHHHhhhHHHHHHhhccccc
Confidence 34445566777778888888887777 8888888767776554 2221111 11 123457888888 9999886
Q ss_pred HHH-HHHHHHHHHHHHhhc-----------chhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHH
Q 022133 121 FQL-CALPMIIGASISATT-----------RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCL 188 (302)
Q Consensus 121 ~~~-~~~~~~i~~~~~~~~-----------~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~ 188 (302)
-++ +..+.+..+...+.. ++...+....++.-+.++..-...-...-.+..+++-|.+......+...
T Consensus 101 Wvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~ 180 (510)
T KOG3574|consen 101 WVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTA 180 (510)
T ss_pred eeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhh
Confidence 532 333333334333321 23333434455666666666666667777888889999999888888888
Q ss_pred HHHHHHHHhhccc
Q 022133 189 GLMGSLLIGIPVK 201 (302)
Q Consensus 189 g~~~~~~~~~~~~ 201 (302)
|.+++..+.-.+.
T Consensus 181 GyfL~~~ifLaL~ 193 (510)
T KOG3574|consen 181 GYFLGNVVFLALE 193 (510)
T ss_pred hHHhhcceeeEec
Confidence 8888876655443
No 251
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.39 E-value=0.02 Score=51.30 Aligned_cols=108 Identities=14% Similarity=0.101 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh---hhhHHHHHHHHHHHHHHHHHHHhhc------------------chhHHHHHHHH
Q 022133 91 GLVVSMCLGGAFIGSTLSGWIAD---GVGRRRAFQLCALPMIIGASISATT------------------RNLIGMLLGRF 149 (302)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~g~l~d---~~Grr~~~~~~~~~~~i~~~~~~~~------------------~~~~~~~~~r~ 149 (302)
+.......+|..++..+.+.+++ ++||++.+.++.++..+++++.-+. ++.....+.-+
T Consensus 282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 282 AIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGF 361 (461)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHH
Confidence 44445556666677777777775 5789999999988887777665432 13456677789
Q ss_pred HHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhc
Q 022133 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIP 199 (302)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~ 199 (302)
+.|++-+...+..+.++.... +++|..+.+++..-..++..++.+..+.
T Consensus 362 l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 362 LLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 999999999999999999999 6778888888777777766665554443
No 252
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.32 E-value=0.0018 Score=56.89 Aligned_cols=151 Identities=15% Similarity=0.101 Sum_probs=90.0
Q ss_pred hhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhH-HHHHHHHHHHHHHHHHH-Hhhc---chhHHHHHHHHHHhh
Q 022133 79 LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGR-RRAFQLCALPMIIGASI-SATT---RNLIGMLLGRFVVGT 153 (302)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Gr-r~~~~~~~~~~~i~~~~-~~~~---~~~~~~~~~r~~~g~ 153 (302)
..-|++. ...|++.....++.++++.++|.+.||... |.++++......++... ..+. ...+.++....+.|+
T Consensus 294 ~~sgY~~--~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~ 371 (480)
T KOG2563|consen 294 CPSGYEG--VFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGF 371 (480)
T ss_pred ccccCCc--cccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHH
Confidence 3345544 334899999999999999999999999854 55555555554444322 1121 233455666778888
Q ss_pred hhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCc---chHHHHHHhHHHHHHHHHHhhccCC
Q 022133 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG---WWRICFWVSIVPAAILCLAMVFCAE 230 (302)
Q Consensus 154 ~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g---~w~~~~~~~~~~~~~~~~~~~~~pe 230 (302)
+..+.+|...-+-.|..-|..-+...|+.+....+-+++-.++.+...+..+ +|...-+......++.+++..++++
T Consensus 372 ~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~ 451 (480)
T KOG2563|consen 372 FGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRP 451 (480)
T ss_pred hhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhh
Confidence 8888889888888888655555666777555444444444444444443332 2222233334444444444455544
Q ss_pred C
Q 022133 231 S 231 (302)
Q Consensus 231 ~ 231 (302)
.
T Consensus 452 ~ 452 (480)
T KOG2563|consen 452 D 452 (480)
T ss_pred h
Confidence 3
No 253
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.28 E-value=0.015 Score=52.07 Aligned_cols=105 Identities=12% Similarity=-0.076 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCC
Q 022133 94 VSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPF 173 (302)
Q Consensus 94 ~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~ 173 (302)
.++......+++++.+.+.|+.|.|..+.++..+.......+-+.+ -.-+++.-.+.|+|.+..+.....+++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N-~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPN-SYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcc-hHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 6667777889999999999999999999999999888777665555 444678889999999998888889999999999
Q ss_pred ccchhHhHHHHHHHHHHHHHHHHhhc
Q 022133 174 VRGTYGAFIQIATCLGLMGSLLIGIP 199 (302)
Q Consensus 174 ~R~~~~~~~~~~~~~g~~~~~~~~~~ 199 (302)
.+.+..++.=.....+.++|..+-..
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~ 160 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFI 160 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhhee
Confidence 99998888666666666666554433
No 254
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.26 E-value=0.052 Score=48.52 Aligned_cols=157 Identities=10% Similarity=0.008 Sum_probs=95.8
Q ss_pred CCcchhHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCC-cchhhHHHHHHHHH-HHHHHHHHHHhhhhhhhHHHHH
Q 022133 44 PSWKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNG-NTLAEGLVVSMCLG-GAFIGSTLSGWIADGVGRRRAF 121 (302)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~i~~~~~g~l~d~~Grr~~~ 121 (302)
+..|..+...+...+..++..++.+.. -.+.+.+..+. .....+++-+...+ +..+..++..++++++.|.+++
T Consensus 20 pi~r~E~~kflpl~Ll~f~I~~ny~~l----R~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF 95 (509)
T COG3202 20 PIRRYELKKFLPLALLFFCILFNYNLL----RSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVF 95 (509)
T ss_pred eccHHHHHHHHHHHHHHHHHHHHHHHH----HHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHH
Confidence 334445555555656555555554333 23344444331 22222555565555 5678888999999999999988
Q ss_pred HHHHHHHHHHHHHHhhc---------ch-----------------------hHHHHHHHHHHhhhhcchhh-hHHHHhhh
Q 022133 122 QLCALPMIIGASISATT---------RN-----------------------LIGMLLGRFVVGTGMGLGPT-VAALYVTE 168 (302)
Q Consensus 122 ~~~~~~~~i~~~~~~~~---------~~-----------------------~~~~~~~r~~~g~~~~~~~~-~~~~~~~e 168 (302)
-+.........+++++. ++ -|...+...+.=+-.....+ +-+.+..|
T Consensus 96 ~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNe 175 (509)
T COG3202 96 YIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANE 175 (509)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66665555544444431 11 12222222222222222333 45678889
Q ss_pred cCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccC
Q 022133 169 VSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (302)
Q Consensus 169 ~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 204 (302)
++..++-.+..++++.+.+++.+++..+..++.+..
T Consensus 176 itt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~ 211 (509)
T COG3202 176 ITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHR 211 (509)
T ss_pred hhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhch
Confidence 999999999999999999999999888888877644
No 255
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.18 E-value=0.0044 Score=55.66 Aligned_cols=141 Identities=13% Similarity=0.061 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhh-c---------chhHHHHHHHHHHhhhhcchhh
Q 022133 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT-T---------RNLIGMLLGRFVVGTGMGLGPT 160 (302)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~-~---------~~~~~~~~~r~~~g~~~~~~~~ 160 (302)
+.+..+..++..+|..+.....-+..-|+++..+.++.++..+.-.. . ++.+-.+.--++..+..+..+-
T Consensus 258 ~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~m 337 (433)
T PF03092_consen 258 GTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFM 337 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHH
Confidence 56666666677777777777666667788888877776665543221 1 1112122334455555555556
Q ss_pred hHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcc-------hHHHHHHhHHHHHHHHHHhhccCCC
Q 022133 161 VAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW-------WRICFWVSIVPAAILCLAMVFCAES 231 (302)
Q Consensus 161 ~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~-------w~~~~~~~~~~~~~~~~~~~~~pe~ 231 (302)
....+++|++|+..-|+..++.....++|..++..++..+.+..+. -.+..++..+..++.+.+..++|+.
T Consensus 338 P~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~lLp~~ 415 (433)
T PF03092_consen 338 PSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFLLPPQ 415 (433)
T ss_pred HHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 6778899999999999999998888888887777777766543321 1223334444445555556667765
No 256
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.17 E-value=0.013 Score=52.24 Aligned_cols=145 Identities=13% Similarity=0.109 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH
Q 022133 54 LVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS 133 (302)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~ 133 (302)
....++..+.++..-.....+..+...-|++.... |..-+...+....|.++..++.+|+|..+.=+++.........
T Consensus 261 flas~alalLY~TVLsf~~lmt~yl~~~G~s~~~i--gi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~ 338 (432)
T PF06963_consen 261 FLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVI--GIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLA 338 (432)
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHH
Confidence 33444444434443334556666666668876655 7888888888899999999999999988887777665544333
Q ss_pred HHh---hc---c----hhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcc
Q 022133 134 ISA---TT---R----NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (302)
Q Consensus 134 ~~~---~~---~----~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~ 200 (302)
++. +. + +...++.+-.+.-+|.=+.-....-++.|..|.++||...|.-+...++--++...++-.+
T Consensus 339 ~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 339 LCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred HHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 222 11 1 2233333344444444445556667889999999999999998888777777666665443
No 257
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.12 E-value=0.0044 Score=54.37 Aligned_cols=134 Identities=15% Similarity=0.096 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcC
Q 022133 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVS 170 (302)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~ 170 (302)
+.+.-+-.+-..+.-+++.++.+|+.-+.=+.+..++++++.++.+++++.+.-+++-++.+++.|........+.. .+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hc
Confidence 34555555566677777888888876444445666677888888888899988889999999999988877777644 55
Q ss_pred CCCccchhHhHHHHHHHHHHHHHHHHhhcccccCc-chHHHHHHhHHHHHHHHHHh-hccCC
Q 022133 171 PPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG-WWRICFWVSIVPAAILCLAM-VFCAE 230 (302)
Q Consensus 171 p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g-~w~~~~~~~~~~~~~~~~~~-~~~pe 230 (302)
++ ..++-+..+.+.++++|+.....+.+ .+ .-|..+++.....++.++.+ +.+|.
T Consensus 141 ~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 141 GK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred Cc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 54 34566667777777777777665555 33 13555555544444443333 34554
No 258
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.10 E-value=0.041 Score=50.00 Aligned_cols=156 Identities=10% Similarity=0.081 Sum_probs=87.4
Q ss_pred CCcchhHHHHHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHH-HHHHHHHHHHhhhhhhhHHHHHH
Q 022133 44 PSWKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLG-GAFIGSTLSGWIADGVGRRRAFQ 122 (302)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~g~l~d~~Grr~~~~ 122 (302)
+..+..++.++...+..|+..++.+..-..-..+.-. ..+.+.. ..+-....+ +.++...+..+++++++|.+++-
T Consensus 17 pi~~~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt-~~gae~I--~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy 93 (491)
T PF03219_consen 17 PIHRSELKKFLPLALMFFFILFNYTILRDLKDTLVVT-AQGAEVI--PFLKVWGVLPVAILFTILYSKLSNRLSREKLFY 93 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEe-cCChhHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 3334455556666666666555543322211111100 0111211 333333333 34566778899999999999886
Q ss_pred HHHHHHHHHHHHHhh---------cch----------------------hHHHHHHHHHHhhhhcchhh-hHHHHhhhcC
Q 022133 123 LCALPMIIGASISAT---------TRN----------------------LIGMLLGRFVVGTGMGLGPT-VAALYVTEVS 170 (302)
Q Consensus 123 ~~~~~~~i~~~~~~~---------~~~----------------------~~~~~~~r~~~g~~~~~~~~-~~~~~~~e~~ 170 (302)
+..........++++ .++ .|...+..+..-+-.....+ +-+.+..|.+
T Consensus 94 ~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~it 173 (491)
T PF03219_consen 94 IIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEIT 173 (491)
T ss_pred HHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 555544444333332 011 11222222222222223333 4578899999
Q ss_pred CCCccchhHhHHHHHHHHHHHHHHHHhhcccc
Q 022133 171 PPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (302)
Q Consensus 171 p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 202 (302)
+.++-.+..++...+.++|.+++..+...+.+
T Consensus 174 t~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 174 TVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988877777666
No 259
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=96.93 E-value=0.036 Score=48.49 Aligned_cols=91 Identities=10% Similarity=-0.047 Sum_probs=48.4
Q ss_pred hHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHH
Q 022133 141 LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAI 220 (302)
Q Consensus 141 ~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~ 220 (302)
+...++.-.+.+++.+......+...+++. ++.-...++=.+.+..+-+.+.-+.-....+....-...|.++.+..++
T Consensus 117 f~vt~~~vv~~~~a~a~~qgs~~G~a~~~P-~~ytqavm~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~~~~ll 195 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQGSLYGLAGLFP-SEYTQAVMSGQALAGTLTSLLRILTKAAFSDSRTSALIYFITSTVILLL 195 (406)
T ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhcCC-HHHHHHHHhcchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHHHHHHH
Confidence 455566677788888887777777777654 4432222222222222222222222222222222234566667777777
Q ss_pred HHHHhhccCCCh
Q 022133 221 LCLAMVFCAESP 232 (302)
Q Consensus 221 ~~~~~~~~pe~~ 232 (302)
+++++..+|..|
T Consensus 196 C~i~y~~l~~lp 207 (406)
T KOG1479|consen 196 CFVLYLVLPKLP 207 (406)
T ss_pred HHHHHHHhhcch
Confidence 777777777765
No 260
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.91 E-value=0.0018 Score=53.05 Aligned_cols=97 Identities=20% Similarity=0.316 Sum_probs=67.7
Q ss_pred chhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 022133 71 NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFV 150 (302)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~ 150 (302)
.+++-++...+|+...+. |.+..+-+-...+...+.|-++|+-|||+.-+.-.+..+++| +.-.++.+-.++++|.+
T Consensus 57 gPYvYyLYstYgFgkG~I--gqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~L 133 (454)
T KOG4332|consen 57 GPYVYYLYSTYGFGKGDI--GQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRVL 133 (454)
T ss_pred CceeeeeehhcCccCCcc--ceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehhhh
Confidence 445555666777776665 555555555566777888999999999997555444444443 33456788889999999
Q ss_pred HhhhhcchhhhHHHH-hhhcC
Q 022133 151 VGTGMGLGPTVAALY-VTEVS 170 (302)
Q Consensus 151 ~g~~~~~~~~~~~~~-~~e~~ 170 (302)
.|+..+..++..-++ +.|.-
T Consensus 134 GGiaTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 134 GGIATSLLFSAFESWLIAEHN 154 (454)
T ss_pred hhHHHHHHHHHHHHHHHHHhh
Confidence 999998888776654 55654
No 261
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.72 E-value=0.11 Score=46.46 Aligned_cols=167 Identities=11% Similarity=-0.011 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHH---
Q 022133 54 LVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMII--- 130 (302)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i--- 130 (302)
..+....++..++.-+..+..+.+..+.. +.+-...+...-.-.+..++..+..|.+.||..|.+++..+.++.-+
T Consensus 5 ~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~-p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~ 83 (432)
T PF06963_consen 5 WRLYLSHFLSTWGDRMWEFAVPLFLISIF-PGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVA 83 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHH
Confidence 44556667777777777777777776652 11222223333444455667888889999999999988777665432
Q ss_pred -HHHHHhh----cc-----hh--HHHHHHHHHHhhhhcchhhhHHHHh--hhcC------CCCccchhHhHHHHHHHHHH
Q 022133 131 -GASISAT----TR-----NL--IGMLLGRFVVGTGMGLGPTVAALYV--TEVS------PPFVRGTYGAFIQIATCLGL 190 (302)
Q Consensus 131 -~~~~~~~----~~-----~~--~~~~~~r~~~g~~~~~~~~~~~~~~--~e~~------p~~~R~~~~~~~~~~~~~g~ 190 (302)
++.++.. .. +. ..+++.-.+.|...-. ......+. -||. .+..+....+...-.--+.-
T Consensus 84 ~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~L-as~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ck 162 (432)
T PF06963_consen 84 ASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERL-ASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCK 162 (432)
T ss_pred HHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHH-HHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHH
Confidence 2222221 11 11 1111111222211111 11222221 2332 23334445555555666778
Q ss_pred HHHHHHhhcccccCcchHHHHHHhHHHHHHHHH
Q 022133 191 MGSLLIGIPVKEIAGWWRICFWVSIVPAAILCL 223 (302)
Q Consensus 191 ~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~ 223 (302)
+++|++.|.+.+..+ .....++.+...++.++
T Consensus 163 llaPl~vG~l~t~~s-~~~~~~~i~~~N~~S~~ 194 (432)
T PF06963_consen 163 LLAPLFVGLLMTFAS-PVIAAIFIAGWNLASVF 194 (432)
T ss_pred HHHHHHHHHHhhccC-HHHHHHHHHHHHHHHHH
Confidence 999999999988777 56666555555555443
No 262
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.72 E-value=0.065 Score=48.02 Aligned_cols=108 Identities=16% Similarity=0.068 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHH---HH----HHHHHHHHHHHHHHHhhc----------chhHHHHHHHHHHhh
Q 022133 91 GLVVSMCLGGAFIGSTLSGWIADGVGRR---RA----FQLCALPMIIGASISATT----------RNLIGMLLGRFVVGT 153 (302)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr---~~----~~~~~~~~~i~~~~~~~~----------~~~~~~~~~r~~~g~ 153 (302)
++..+.-.+.-++..++..++--+.+++ +. +-+++++.+.+.++.... .+.++++...+++++
T Consensus 327 ~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~ 406 (498)
T COG3104 327 AWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSF 406 (498)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 4777777777777888777777775554 11 233444444333333221 246778888999999
Q ss_pred hhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhh
Q 022133 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGI 198 (302)
Q Consensus 154 ~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~ 198 (302)
|.=+..|+..+++..+.|++-.+..++.+......|..++..+++
T Consensus 407 gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 407 GELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 999999999999999999999999999988888888877776666
No 263
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.70 E-value=0.047 Score=49.05 Aligned_cols=108 Identities=12% Similarity=0.034 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHH--HHHHHHH--HHHHHHHHHHhhc---------chhHHHHHHHHHHhhhhcc
Q 022133 91 GLVVSMCLGGAFIGSTLSGWIADGVGRR--RAFQLCA--LPMIIGASISATT---------RNLIGMLLGRFVVGTGMGL 157 (302)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr--~~~~~~~--~~~~i~~~~~~~~---------~~~~~~~~~r~~~g~~~~~ 157 (302)
-.....+++|-.+|..+..+..- -++| .+++.+. ++.+...+++... ++-+..++..++.|+..|-
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~~-p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFMW-PDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeEe-eCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 35667778888888876554311 1222 3332222 1222222233222 3455667778999999999
Q ss_pred hhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhc
Q 022133 158 GPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIP 199 (302)
Q Consensus 158 ~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~ 199 (302)
..+....+..+..++++|..+..+...+..+|..+|..++-.
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988888899999999999999999999999998888877544
No 264
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.64 E-value=0.027 Score=50.60 Aligned_cols=89 Identities=15% Similarity=0.078 Sum_probs=47.8
Q ss_pred hhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhh----cccccCcc---hHHHHH
Q 022133 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGI----PVKEIAGW---WRICFW 212 (302)
Q Consensus 140 ~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~g~---w~~~~~ 212 (302)
.++..++.-++.|++.+........+.+ .+|++. +..+..+.+++++++.++.- ...+..+. -...|.
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~~----~~a~~~G~g~aGv~~s~~~ii~~a~~~~~~~~~~~a~~YF~ 179 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPSTY----SSAVMSGQGLAGVLTSLAMILVKASGNDSHGLKKSALGYFG 179 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHHH----HHHHHhcchhHHHHHHHHHHHHHHhcCCccchhhhhhhHHH
Confidence 3556666777888888888877777777 555442 33333344444433332211 11121011 123444
Q ss_pred HhHHHHHHHHHHhhccCCChH
Q 022133 213 VSIVPAAILCLAMVFCAESPH 233 (302)
Q Consensus 213 ~~~~~~~~~~~~~~~~pe~~~ 233 (302)
++++..+++++.+..++..|.
T Consensus 180 ~a~~v~l~~i~~~~~l~k~~~ 200 (437)
T TIGR00939 180 TPCVVQLICIVCYLLLPKLPF 200 (437)
T ss_pred HHHHHHHHHHHHHHHHhcCHH
Confidence 556666666666767777654
No 265
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.59 E-value=0.011 Score=55.81 Aligned_cols=77 Identities=10% Similarity=0.108 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHhhhhccchhhhhhhh-hcccCCcchhhHHHHHHHHH-HHHHHHHHHHhhhhhhh--HHHHHHHHHHHHH
Q 022133 54 LVATLSSFLFGYHLGVVNEPLESISL-DLGFNGNTLAEGLVVSMCLG-GAFIGSTLSGWIADGVG--RRRAFQLCALPMI 129 (302)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~g~l~d~~G--rr~~~~~~~~~~~ 129 (302)
+...+..++.......+..++|.+.+ .+|++..+. +++.+...+ +.+++.+++|+++||++ .|..+.++.++..
T Consensus 333 ~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~a--g~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~ 410 (633)
T TIGR00805 333 MLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEA--NFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLST 410 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH--HHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHH
Confidence 33444444444444555667776655 578776655 777776665 56899999999999998 5566666666555
Q ss_pred HHH
Q 022133 130 IGA 132 (302)
Q Consensus 130 i~~ 132 (302)
++.
T Consensus 411 ~~~ 413 (633)
T TIGR00805 411 LSY 413 (633)
T ss_pred HHH
Confidence 553
No 266
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.51 E-value=0.005 Score=55.23 Aligned_cols=72 Identities=13% Similarity=0.168 Sum_probs=56.9
Q ss_pred HHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHH
Q 022133 148 RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAI 220 (302)
Q Consensus 148 r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~ 220 (302)
-++.|++.-.......+.-+|...++.++.+.++++....++..++|++........| .|+...+.+...++
T Consensus 395 i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g-~~~v~~~~~~~~l~ 466 (488)
T KOG2325|consen 395 IVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSG-PRPVWIILLCLLLV 466 (488)
T ss_pred hheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcC-ccHHHHHHHHHHHH
Confidence 4556666666666777888999999999999999999999999999999988888877 56666554443333
No 267
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=96.34 E-value=0.0055 Score=54.12 Aligned_cols=126 Identities=21% Similarity=0.156 Sum_probs=70.5
Q ss_pred cccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHH----HHHHHHHH-------HHHHHHHHHh-hcchhHHHHHHH
Q 022133 81 LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRR----RAFQLCAL-------PMIIGASISA-TTRNLIGMLLGR 148 (302)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr----~~~~~~~~-------~~~i~~~~~~-~~~~~~~~~~~r 148 (302)
.|.+.+.. .++..++..+..+|.+++|.++|++-|+ ....+.-+ +.+...++.. ...+...+.+..
T Consensus 278 ~~~~~~~~--~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il 355 (493)
T KOG1330|consen 278 IGFDHNAT--LIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLIL 355 (493)
T ss_pred hCCccccc--hhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHH
Confidence 34444444 4677777888899999999999994331 11111111 1111111111 122222222333
Q ss_pred HHHhhhhcch-hhhHHHHhhhcCCCCccchhHhH-HHHHHHHHHHHHHHHhhcccccCcchH
Q 022133 149 FVVGTGMGLG-PTVAALYVTEVSPPFVRGTYGAF-IQIATCLGLMGSLLIGIPVKEIAGWWR 208 (302)
Q Consensus 149 ~~~g~~~~~~-~~~~~~~~~e~~p~~~R~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~g~w~ 208 (302)
++.|...... .....-+..|..|++.|.++.++ ......+|.+-+|.+-|.+.++.-.|+
T Consensus 356 ~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 356 FLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 4444433322 33344567788999999999999 455667777777767677765542244
No 268
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.29 E-value=0.0036 Score=56.25 Aligned_cols=81 Identities=25% Similarity=0.329 Sum_probs=61.4
Q ss_pred HHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHH-HHHHHHHH
Q 022133 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCA-LPMIIGAS 133 (302)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~-~~~~i~~~ 133 (302)
.+=+..+..+...+.+.+.++.+.+++|++.++. |.++..--+..+++.|++|+++||+-+|+.++++. +....+.+
T Consensus 15 ~~k~f~~~~~~~~g~l~pll~vy~kQLGl~p~~~--Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~f 92 (618)
T KOG3762|consen 15 VAKLFYLFFGARFGSLFPLLAVYFKQLGLNPAVV--GTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATF 92 (618)
T ss_pred eeeeeeeeeeecccccchHHHHHHHHcCCCHHHh--hhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 3334444555566678889999999999988776 88999888999999999999999998766665554 45555555
Q ss_pred HHhh
Q 022133 134 ISAT 137 (302)
Q Consensus 134 ~~~~ 137 (302)
+..+
T Consensus 93 ll~f 96 (618)
T KOG3762|consen 93 LLVF 96 (618)
T ss_pred heee
Confidence 5554
No 269
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=96.26 E-value=0.0046 Score=52.57 Aligned_cols=154 Identities=13% Similarity=0.104 Sum_probs=108.7
Q ss_pred hcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchh
Q 022133 80 DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGP 159 (302)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~ 159 (302)
+.|++.++.. .-+.-...-.+.+.-.+.=.+.|..--|++++.-.+...+.-.+..+.++.+.+=+.-++.|...+. .
T Consensus 35 ~~NlT~~~l~-~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAa-E 112 (433)
T KOG3810|consen 35 DKNLTEDQLT-NEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAA-E 112 (433)
T ss_pred CCCccHHHHh-cccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHH-H
Confidence 4455544331 2222333344556666777789998889988887777777777777888888887888888886543 4
Q ss_pred hhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcc-hHHHHHHhHHHHHHHHHHhhccCCChHHH
Q 022133 160 TVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW-WRICFWVSIVPAAILCLAMVFCAESPHWL 235 (302)
Q Consensus 160 ~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~-w~~~~~~~~~~~~~~~~~~~~~pe~~~~~ 235 (302)
...++++-+..+++++.+..+....+.-.|-+.|..++..+...... +...-.+......++.+..+++|..++..
T Consensus 113 IAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl 189 (433)
T KOG3810|consen 113 IAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSL 189 (433)
T ss_pred HhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhh
Confidence 56778888888999999999999988888988888888877654431 34444556566666777778888765443
No 270
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.20 E-value=0.015 Score=52.04 Aligned_cols=145 Identities=12% Similarity=0.042 Sum_probs=76.9
Q ss_pred HHHHHHHHHHhhhhccchhhhhhhhh--cccCCcchhhHHHH--HH-HHHHHHHHHHHHHhhhhhhhHHHHHHHHH-HHH
Q 022133 55 VATLSSFLFGYHLGVVNEPLESISLD--LGFNGNTLAEGLVV--SM-CLGGAFIGSTLSGWIADGVGRRRAFQLCA-LPM 128 (302)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~-~~~~~~i~~~~~g~l~d~~Grr~~~~~~~-~~~ 128 (302)
++.+.++++|.-.+......|.+.++ -+.+.++. |... +. +.+=-.-+.++=...+.|+|||+.-++=. .+.
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~--~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~ 81 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQ--AIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLS 81 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHh--eeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHH
Confidence 45566777777776665667777766 45555543 2111 11 11111223333444555899998765432 222
Q ss_pred HHHHHHHhhcc----------------------hh--HHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHH
Q 022133 129 IIGASISATTR----------------------NL--IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQI 184 (302)
Q Consensus 129 ~i~~~~~~~~~----------------------~~--~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~ 184 (302)
++.++..+... +. ..+.+..++.-+.++..-.+.-...-.+..++.++.+......
T Consensus 82 g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtv 161 (544)
T PF13000_consen 82 GILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTV 161 (544)
T ss_pred HHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHh
Confidence 22222222111 01 1122222233333333333444455567788889999988888
Q ss_pred HHHHHHHHHHHHhhccc
Q 022133 185 ATCLGLMGSLLIGIPVK 201 (302)
Q Consensus 185 ~~~~g~~~~~~~~~~~~ 201 (302)
+...|.+++..+.-.+.
T Consensus 162 G~~~Gyfls~tvFlaln 178 (544)
T PF13000_consen 162 GQTAGYFLSFTVFLALN 178 (544)
T ss_pred HhhhhHHHHHHHHHhhC
Confidence 88999888877665554
No 271
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=95.17 E-value=0.0066 Score=51.93 Aligned_cols=107 Identities=19% Similarity=0.206 Sum_probs=3.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhh-hhHHHHHHHHHH--HHHHHHHHHhh----------cchhHHHHHHHHHHhhhhcchh
Q 022133 93 VVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCAL--PMIIGASISAT----------TRNLIGMLLGRFVVGTGMGLGP 159 (302)
Q Consensus 93 ~~~~~~~~~~i~~~~~g~l~d~-~Grr~~~~~~~~--~~~i~~~~~~~----------~~~~~~~~~~r~~~g~~~~~~~ 159 (302)
....++++-.+|..+.++.--+ -.+|.+.+.+.. +.+...+++.. .++-+..++..++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 4567888888888887764211 134444433221 11111122211 2344556777889999999998
Q ss_pred hhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhc
Q 022133 160 TVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIP 199 (302)
Q Consensus 160 ~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~ 199 (302)
+....+..+..++++|..+..+...+..+|..+|..++-.
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp HHHH------------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999888888888888888776544
No 272
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.13 E-value=0.0057 Score=56.38 Aligned_cols=148 Identities=18% Similarity=0.213 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhhhccchhhhhhhh-hcccCCcchhhHHHHHHHHH-HHHHHHHHHHhhhhhhh--HHHHHHHHHHHHH
Q 022133 54 LVATLSSFLFGYHLGVVNEPLESISL-DLGFNGNTLAEGLVVSMCLG-GAFIGSTLSGWIADGVG--RRRAFQLCALPMI 129 (302)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~g~l~d~~G--rr~~~~~~~~~~~ 129 (302)
+...++..........+..++|.+.+ +|+.+.+.+ +++..+..+ +.++|.+++|++..|+. .|..+....+...
T Consensus 308 ~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A--~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~ 385 (539)
T PF03137_consen 308 MCLILAGVFESFIVSGFATFLPKYLESQFGLSASQA--SLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSI 385 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHH
Confidence 34444444555555556677776654 577776665 556555544 67899999999999874 3444444443333
Q ss_pred HHHHHHh---h--cc-------------------------------------------------hhHHHHHHHHHHhhhh
Q 022133 130 IGASISA---T--TR-------------------------------------------------NLIGMLLGRFVVGTGM 155 (302)
Q Consensus 130 i~~~~~~---~--~~-------------------------------------------------~~~~~~~~r~~~g~~~ 155 (302)
++.+... + ++ .+..+++..++.-+..
T Consensus 386 v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~ 465 (539)
T PF03137_consen 386 VSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFT 465 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHH
Confidence 3322200 0 00 0112223333333333
Q ss_pred cchhhhHHHHhhhcCCCCccchhHhHHH-HHHHHHHHHHHHHhhccccc
Q 022133 156 GLGPTVAALYVTEVSPPFVRGTYGAFIQ-IATCLGLMGSLLIGIPVKEI 203 (302)
Q Consensus 156 ~~~~~~~~~~~~e~~p~~~R~~~~~~~~-~~~~~g~~~~~~~~~~~~~~ 203 (302)
+.........+-.-.|+++|+.++|+.. ....+|.+=+|++.|.+.+.
T Consensus 466 ~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 466 FMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp -------------------------------------------------
T ss_pred HhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 3333344444556778899999999954 45566777788888887764
No 273
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=94.99 E-value=0.19 Score=42.66 Aligned_cols=73 Identities=12% Similarity=0.113 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcC
Q 022133 97 CLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVS 170 (302)
Q Consensus 97 ~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~ 170 (302)
..+.-+.++++.+.+..++|-|.++.++........ ..-+-+.+..++-.-.+.|++.+..+....+|++++-
T Consensus 67 ~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyi-A~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 67 LYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYI-AANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH-HhhcchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 334455777778899999999999988877765532 2223466777888888999999888777777776654
No 274
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.92 E-value=0.81 Score=40.57 Aligned_cols=91 Identities=14% Similarity=0.004 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHH--HHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhh
Q 022133 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCA--LPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (302)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e 168 (302)
|.+-++..+.++++.+..|++..++.+..-+..+. ++.+...++++..++.+..+++.++.+.......+....-++.
T Consensus 288 G~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~ 367 (412)
T PF01770_consen 288 GAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAK 367 (412)
T ss_pred hHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888888889999999999977777755544443 3445555677788899988888888877666666665555555
Q ss_pred cCCCCccchhHhH
Q 022133 169 VSPPFVRGTYGAF 181 (302)
Q Consensus 169 ~~p~~~R~~~~~~ 181 (302)
-...+.-|...|+
T Consensus 368 ~l~~e~yaLVFGi 380 (412)
T PF01770_consen 368 NLSEERYALVFGI 380 (412)
T ss_pred hccccceeeeeee
Confidence 5554544544444
No 275
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=94.11 E-value=0.29 Score=42.99 Aligned_cols=107 Identities=15% Similarity=0.100 Sum_probs=75.8
Q ss_pred HHHHH-HHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHh-------hcchhHHHHHHHHHHhhhhcchhhhHH
Q 022133 92 LVVSM-CLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA-------TTRNLIGMLLGRFVVGTGMGLGPTVAA 163 (302)
Q Consensus 92 ~~~~~-~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~~r~~~g~~~~~~~~~~~ 163 (302)
....+ +++.-.+|.+.+.++-+.=.|+.......=...+..+.+. .-.+-+.+++...+.|+..|-..++..
T Consensus 286 ~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl~m 365 (406)
T KOG1479|consen 286 LLVFLSFNVFDLIGSILAALLTWPDPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSLIM 365 (406)
T ss_pred HHHHHHhHHHHHhhhhhhhcccCCCCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhhhee
Confidence 44555 8888888877777776654444433333333333333321 234566778888999999998888888
Q ss_pred HHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhh
Q 022133 164 LYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGI 198 (302)
Q Consensus 164 ~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~ 198 (302)
.+..+..|++++-.+..+...+...|.+.|..++.
T Consensus 366 ~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~ 400 (406)
T KOG1479|consen 366 MYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSW 400 (406)
T ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 89999999999998888888888888888877654
No 276
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=92.74 E-value=0.94 Score=41.07 Aligned_cols=94 Identities=7% Similarity=-0.058 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH--HHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhh
Q 022133 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQ--LCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (302)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e 168 (302)
|.+-++..+..+++.+..|++-.++.+---+. +..++.+...++++.++|.+..+++.++.+.......++...-++.
T Consensus 301 G~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~ 380 (511)
T TIGR00806 301 GAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIAS 380 (511)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67778888888899999999987775533333 3344455556677888999999999999998888887777777777
Q ss_pred cCCCCccchhHhHHHH
Q 022133 169 VSPPFVRGTYGAFIQI 184 (302)
Q Consensus 169 ~~p~~~R~~~~~~~~~ 184 (302)
-...+.-|...|+.+.
T Consensus 381 ~L~~~~~aLvFGiNtf 396 (511)
T TIGR00806 381 SLSKELCALVFGINTF 396 (511)
T ss_pred HhcccceEEEEecHHH
Confidence 7666666777776443
No 277
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=91.78 E-value=8.2 Score=33.55 Aligned_cols=134 Identities=16% Similarity=0.089 Sum_probs=73.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH----HHHHHH---HHHHHHHhh--cchhHHHHHHHHHHhhhhcc
Q 022133 87 TLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQ----LCALPM---IIGASISAT--TRNLIGMLLGRFVVGTGMGL 157 (302)
Q Consensus 87 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~----~~~~~~---~i~~~~~~~--~~~~~~~~~~r~~~g~~~~~ 157 (302)
-.+++.+++.+.....+|+.+.-++.|---.-+.+. .|++.. .+..+.+++ .++.+.++++-.+.|.-.|+
T Consensus 42 Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG~ 121 (508)
T COG4262 42 ILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLVGA 121 (508)
T ss_pred eeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHHhc
Confidence 344478999999999999999988887543322221 222221 111112222 24566778888889988888
Q ss_pred hhhhHHHHhhh-cCCCCccchhHhHHHHHHHHHHHHHHHHhhccc-ccCcchHHHHHHhHHHHHHHHH
Q 022133 158 GPTVAALYVTE-VSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK-EIAGWWRICFWVSIVPAAILCL 223 (302)
Q Consensus 158 ~~~~~~~~~~e-~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~g~w~~~~~~~~~~~~~~~~ 223 (302)
-.|....+... ....+.- .+.....--+|...+.++.+++. ...|.-|..+..+.+..+.+++
T Consensus 122 EiPL~mrml~~r~a~~k~~---~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~aAvv 186 (508)
T COG4262 122 EIPLLMRMLQRRQAKAKDL---GSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLAAAVV 186 (508)
T ss_pred chHHHHHHHHHHHHHHHhh---hhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHH
Confidence 88888777665 2222221 22222234556655555555432 3344455555554444444433
No 278
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=89.22 E-value=2 Score=36.46 Aligned_cols=72 Identities=14% Similarity=0.079 Sum_probs=59.8
Q ss_pred HHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhccc
Q 022133 130 IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (302)
Q Consensus 130 i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~ 201 (302)
+...+..+.++++..++.-+.-|+-.|..+.-.+--+.+-.++++|-.+++....+.++|..++.+++-.+-
T Consensus 331 ~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh 402 (409)
T KOG3880|consen 331 LLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLH 402 (409)
T ss_pred HHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccch
Confidence 334456678999988888999999888888888777888788899999999999999999999888876543
No 279
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=87.98 E-value=0.39 Score=42.80 Aligned_cols=128 Identities=16% Similarity=-0.042 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhc--
Q 022133 92 LVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEV-- 169 (302)
Q Consensus 92 ~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~-- 169 (302)
|-..+..+...+.+....++++|+|-|+.+..+.....++..+.++.++.......+...|+-.+....+.+..+++.
T Consensus 336 ~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~ 415 (498)
T KOG0637|consen 336 LGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYAI 415 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHHH
Confidence 334455556668999999999999966666666665666666666666666666666666644444433333333221
Q ss_pred -------------------CCC--CccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHH
Q 022133 170 -------------------SPP--FVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAA 219 (302)
Q Consensus 170 -------------------~p~--~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~ 219 (302)
... .-+|...|+.+....+..++..+..|.+.+..|.-+.+.+..++.++
T Consensus 416 ~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~ 486 (498)
T KOG0637|consen 416 LGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVAL 486 (498)
T ss_pred hCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHH
Confidence 111 12344555566666666666555556555555434555444443333
No 280
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=87.24 E-value=0.18 Score=43.12 Aligned_cols=80 Identities=14% Similarity=0.076 Sum_probs=0.0
Q ss_pred HHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhh---cccccCc-chHHHHHHhHHHHHHHHHH
Q 022133 149 FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGI---PVKEIAG-WWRICFWVSIVPAAILCLA 224 (302)
Q Consensus 149 ~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~g-~w~~~~~~~~~~~~~~~~~ 224 (302)
++.|++.+........+.+. +|++.- ..+..+.++++++..++.- ...+... .-...|.++.+..+++++.
T Consensus 5 ~~~~~~~~~~q~s~~glas~-~p~~y~----~a~~~Gq~~aGv~~s~l~ii~~~~~~~~~~~a~~yF~~a~~i~i~~~~~ 79 (309)
T PF01733_consen 5 ALIGFANAVLQSSLFGLASL-FPPKYT----QAVMIGQGLAGVIVSLLRIITKASGSDVKTSAFIYFIIAVLIVILCIIL 79 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEHhhhHHHhccHHHHHhc-CCHHHH----HHHHhhccHHHHHHHHHHHHHHHhhhccchhhhhHHHHHHHHHHHHHHH
Confidence 45666777777777777775 554432 2222333344433333222 1111111 0123444455555556666
Q ss_pred hhccCCChH
Q 022133 225 MVFCAESPH 233 (302)
Q Consensus 225 ~~~~pe~~~ 233 (302)
++.++..|.
T Consensus 80 ~~~l~~~~~ 88 (309)
T PF01733_consen 80 YFILPRSPF 88 (309)
T ss_dssp ---------
T ss_pred HHHhccChH
Confidence 666766543
No 281
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=87.07 E-value=16 Score=30.68 Aligned_cols=96 Identities=16% Similarity=0.191 Sum_probs=64.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhH--HHHHHHHHHHHHHHHHHHhh----cc---hhHHHHHHHHHHhhhhcchhh
Q 022133 90 EGLVVSMCLGGAFIGSTLSGWIADGVGR--RRAFQLCALPMIIGASISAT----TR---NLIGMLLGRFVVGTGMGLGPT 160 (302)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~~g~l~d~~Gr--r~~~~~~~~~~~i~~~~~~~----~~---~~~~~~~~r~~~g~~~~~~~~ 160 (302)
-|.+.+.+++...+|+-+...+..|-.. .+.+.+...+.+....+..+ ++ +...-+++.++.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 3788899999888888888777665433 23444444444433332222 22 233335566667777888999
Q ss_pred hHHHHhhhcCCCCccchhHhHHHHH
Q 022133 161 VAALYVTEVSPPFVRGTYGAFIQIA 185 (302)
Q Consensus 161 ~~~~~~~e~~p~~~R~~~~~~~~~~ 185 (302)
....+=+...|.+.|++.+-++..-
T Consensus 364 SimkmRsqyIPEearstimNfFRvP 388 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVP 388 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheech
Confidence 9989999999999999888775543
No 282
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=85.67 E-value=9 Score=27.29 Aligned_cols=41 Identities=27% Similarity=0.424 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Q 022133 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (302)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~ 131 (302)
+.......++..++..+.+.+.|..|.+..+.+...+..++
T Consensus 90 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (141)
T TIGR00880 90 GLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAA 130 (141)
T ss_pred HHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHH
Confidence 56666677777888888888888887766665554444333
No 283
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=85.19 E-value=1.8 Score=36.75 Aligned_cols=133 Identities=14% Similarity=0.034 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhh--hHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhh
Q 022133 91 GLVVSMCLGGAFIGSTLSGWIADGV--GRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (302)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~g~l~d~~--Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e 168 (302)
|.+..+-.+-..+.-+.+....||+ |.|. .+..++.+.+.++.+++++.++-+.+.++..++.|....... -++.
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri--~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL-~lss 141 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRI--ALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFL-ALSS 141 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHH--HHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehh-hhhc
Confidence 4555555566667777778888875 5554 344555666777778888888888888888888877764333 3333
Q ss_pred cCCCCccchhHhHHHHHHHHHHHHHHHHhhcccc--cCcchHHHHHH-hHHHHHHHHHHhhccCCC
Q 022133 169 VSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE--IAGWWRICFWV-SIVPAAILCLAMVFCAES 231 (302)
Q Consensus 169 ~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~g~w~~~~~~-~~~~~~~~~~~~~~~pe~ 231 (302)
.+|+..-+ .++.+.+.++++|..-...+.+ ..+ -|...++ ..++++.++..++.++++
T Consensus 142 ~Y~~~~i~----~WSSGTGgAGliGa~SYa~lT~~~~~s-pk~Tlli~l~lP~lfa~~yf~lL~~p 202 (409)
T KOG3880|consen 142 RYPSIVIA----GWSSGTGGAGLIGASSYAFLTSWANLS-PKSTLLIMLFLPALFAFAYFFLLKSP 202 (409)
T ss_pred cCCCceec----cccCCCCcchhhhhhHHHHHhhhcCCC-hhhHHHHHHHHHHHHHHHHHheeCCC
Confidence 44443222 2222222233344333333333 223 2444444 445555555555555443
No 284
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=83.81 E-value=12 Score=34.18 Aligned_cols=53 Identities=13% Similarity=0.158 Sum_probs=39.6
Q ss_pred HHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHH
Q 022133 142 IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSL 194 (302)
Q Consensus 142 ~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~ 194 (302)
..+++..++..+.....+....++-+.+..|..-|+.|.+.++..++|+--..
T Consensus 406 ~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~ 458 (544)
T PF13000_consen 406 LLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPR 458 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchH
Confidence 34444556666666666777788889999999999999999998887764433
No 285
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=82.34 E-value=40 Score=30.85 Aligned_cols=68 Identities=13% Similarity=0.063 Sum_probs=48.9
Q ss_pred HHHHHHhhhhcchhhhHHHHhhhcCCC-CccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHh
Q 022133 146 LGRFVVGTGMGLGPTVAALYVTEVSPP-FVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS 214 (302)
Q Consensus 146 ~~r~~~g~~~~~~~~~~~~~~~e~~p~-~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~ 214 (302)
+.-++.|+.....+...-..+.|.+|. ++|...+|-++...++..++..++++.+.+..| |.....+.
T Consensus 271 ~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~G-w~~~a~i~ 339 (472)
T TIGR00769 271 LLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYG-WLTAALIT 339 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHH
Confidence 344556666666676666778888875 467888888888777777666666688888888 87766554
No 286
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=81.24 E-value=2.5 Score=34.86 Aligned_cols=56 Identities=9% Similarity=0.036 Sum_probs=33.6
Q ss_pred CccchhHhHHHHHHHHHHHHHHHHhhcc---cc-cCcchHHHHHHhHHHHHHHHHHhhcc
Q 022133 173 FVRGTYGAFIQIATCLGLMGSLLIGIPV---KE-IAGWWRICFWVSIVPAAILCLAMVFC 228 (302)
Q Consensus 173 ~~R~~~~~~~~~~~~~g~~~~~~~~~~~---~~-~~g~w~~~~~~~~~~~~~~~~~~~~~ 228 (302)
+.|+....+...+..+|+++........ .+ ....|++.+.+.+++.++-++.+.++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4566666667777888877654443222 11 11238988888777766655555444
No 287
>PRK10263 DNA translocase FtsK; Provisional
Probab=80.44 E-value=20 Score=36.70 Aligned_cols=22 Identities=18% Similarity=0.033 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhhH
Q 022133 96 MCLGGAFIGSTLSGWIADGVGR 117 (302)
Q Consensus 96 ~~~~~~~i~~~~~g~l~d~~Gr 117 (302)
+-+.++.+|..+...+..-||-
T Consensus 60 V~Nl~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 60 IHNLGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred cccccchHHHHHHHHHHHHHhH
Confidence 3445556666666666666664
No 288
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=80.03 E-value=28 Score=27.68 Aligned_cols=20 Identities=25% Similarity=0.383 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 022133 92 LVVSMCLGGAFIGSTLSGWI 111 (302)
Q Consensus 92 ~~~~~~~~~~~i~~~~~g~l 111 (302)
.......++..+|..+.+.+
T Consensus 50 ~~~~~~i~~F~~G~~~~~~i 69 (209)
T PF06912_consen 50 LRYLLAILSFILGAFLAGLI 69 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34444555666777777777
No 289
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=78.98 E-value=7.3 Score=27.19 Aligned_cols=30 Identities=17% Similarity=0.182 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhh-hHHHHH
Q 022133 92 LVVSMCLGGAFIGSTLSGWIADGV-GRRRAF 121 (302)
Q Consensus 92 ~~~~~~~~~~~i~~~~~g~l~d~~-Grr~~~ 121 (302)
.-.+.=+++.++-....||+.|+| |-++..
T Consensus 46 ~klssefIsGilVGa~iG~llD~~agTsPwg 76 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKFAGTSPWG 76 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcHH
Confidence 334444555556666778899986 444433
No 290
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=77.02 E-value=28 Score=26.29 Aligned_cols=79 Identities=13% Similarity=0.098 Sum_probs=45.7
Q ss_pred hhhhhhHHHHHHHHHHH-HHHHHHHHhh---------cchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHh
Q 022133 111 IADGVGRRRAFQLCALP-MIIGASISAT---------TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGA 180 (302)
Q Consensus 111 l~d~~Grr~~~~~~~~~-~~i~~~~~~~---------~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~ 180 (302)
++||.-||..+..|.-. .+++.+...+ .+.+..+++..++.|+|. .++.|.+++--..++.-|...|
T Consensus 57 Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG 133 (153)
T PF11947_consen 57 VSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLG 133 (153)
T ss_pred HHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCccc
Confidence 46777777666555432 1222221111 234555555555555443 3466777777777888899999
Q ss_pred HHHHHHHHHHHH
Q 022133 181 FIQIATCLGLMG 192 (302)
Q Consensus 181 ~~~~~~~~g~~~ 192 (302)
+-.+-.+++-+.
T Consensus 134 ~~e~~~N~~r~~ 145 (153)
T PF11947_consen 134 WEEFKRNWGRMW 145 (153)
T ss_pred HHHHHHhHHHHH
Confidence 877777666543
No 291
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=76.93 E-value=27 Score=30.53 Aligned_cols=109 Identities=14% Similarity=0.047 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHH--HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhhhHHHHhhh
Q 022133 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRR--AFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (302)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e 168 (302)
|..-++..+..+++.+..|++.-++.|.. .+.++.+..+...+++.-+++.+..+++.++.+.......++...-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 56666777778899999999987776653 3444445555555667777888887777777776666666666666666
Q ss_pred cCCCCccchhHhHHHHHHHHHHHHHHHHhhcccc
Q 022133 169 VSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (302)
Q Consensus 169 ~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 202 (302)
-...+.-|...|+.... +..+-.++...+.+
T Consensus 354 nL~~e~~gLvFGiNTFv---Al~lQsilT~iVvd 384 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTFV---ALILQSILTLIVVD 384 (433)
T ss_pred hhhhhhheeeeehHHHH---HHHHHHhheEEEEc
Confidence 65556556655653322 23334444444444
No 292
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=71.39 E-value=94 Score=30.15 Aligned_cols=108 Identities=16% Similarity=0.097 Sum_probs=54.4
Q ss_pred Hhhhhh----hhHHHHHHHHHHHHHHHHHHHhhc-chhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHH
Q 022133 109 GWIADG----VGRRRAFQLCALPMIIGASISATT-RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQ 183 (302)
Q Consensus 109 g~l~d~----~Grr~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~ 183 (302)
+-++|. -||.+-++++.++++++.+...+. +..+.+..+-.+.+++.++.... ..|...+++..
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~mlga~-----------G~Rya~Iaf~t 112 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIMLGAV-----------GQRYATIAFGS 112 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHh-----------hhhHHHHHHHH
Confidence 445553 467777778888877777766554 45555555555555544433221 22444444444
Q ss_pred HHHHHHHHHHHHHhhcccccCcchHHHH--HHhHHH-HHHHHHHhhccCCChH
Q 022133 184 IATCLGLMGSLLIGIPVKEIAGWWRICF--WVSIVP-AAILCLAMVFCAESPH 233 (302)
Q Consensus 184 ~~~~~g~~~~~~~~~~~~~~~g~w~~~~--~~~~~~-~~~~~~~~~~~pe~~~ 233 (302)
....+-.++++. ....||..+. ..+++. .++.++.+.+.|..|.
T Consensus 113 Lliaiytmlg~~------~~~~w~~~pllll~GalwY~llsl~~~~l~p~rp~ 159 (704)
T TIGR01666 113 LLVALYTMLGYI------EVNVWFIQPVMLLCGTLWYSVVTLIVHLFFPNRPV 159 (704)
T ss_pred HHHHHHHHhccc------ccchHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH
Confidence 444444444422 1112242333 334444 3334555566787664
No 293
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=65.03 E-value=32 Score=32.98 Aligned_cols=83 Identities=10% Similarity=0.096 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHH
Q 022133 141 LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAI 220 (302)
Q Consensus 141 ~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~ 220 (302)
.++.+.-.++.+++.........-+...-.|++.|..+.+++....++|.++...++..-....- |--.+.++++..+.
T Consensus 565 ~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 643 (654)
T TIGR00926 565 ILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFENFSVQ-AAEFFLFASLMLVV 643 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChHH-HHHHHHHHHHHHHH
Confidence 44455556777777766666666666778899999999999999999999888887765332222 44444444444444
Q ss_pred HHHH
Q 022133 221 LCLA 224 (302)
Q Consensus 221 ~~~~ 224 (302)
.++.
T Consensus 644 ~~~f 647 (654)
T TIGR00926 644 MAIF 647 (654)
T ss_pred HHHH
Confidence 4333
No 294
>COG1288 Predicted membrane protein [Function unknown]
Probab=64.86 E-value=84 Score=28.30 Aligned_cols=21 Identities=10% Similarity=-0.065 Sum_probs=13.2
Q ss_pred cchhHhHHHHHHHHHHHHHHH
Q 022133 175 RGTYGAFIQIATCLGLMGSLL 195 (302)
Q Consensus 175 R~~~~~~~~~~~~~g~~~~~~ 195 (302)
|..+..-++.+..+-.++.|-
T Consensus 418 RqvvV~Afq~g~G~~n~I~PT 438 (481)
T COG1288 418 RQVVVLAFQLGDGFSNIIAPT 438 (481)
T ss_pred HHHhhhhhhhcchhhheecCc
Confidence 666666677776666655543
No 295
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=63.48 E-value=78 Score=26.64 Aligned_cols=37 Identities=8% Similarity=-0.081 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHhh-cchhHHHHHHHHHHhhhhcch
Q 022133 122 QLCALPMIIGASISAT-TRNLIGMLLGRFVVGTGMGLG 158 (302)
Q Consensus 122 ~~~~~~~~i~~~~~~~-~~~~~~~~~~r~~~g~~~~~~ 158 (302)
+.+.++++++.++..+ .++.+.+.+..++.+++.++.
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml 40 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGML 40 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 3444444344444433 344444444445555544433
No 296
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=63.19 E-value=21 Score=34.32 Aligned_cols=79 Identities=14% Similarity=0.132 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHhhhhccchhhhhhhh-hcccCCcchhhHHHHHHHHH-HHHHHHHHHHhhhhhh--hHHHHHHHHHHHH
Q 022133 53 VLVATLSSFLFGYHLGVVNEPLESISL-DLGFNGNTLAEGLVVSMCLG-GAFIGSTLSGWIADGV--GRRRAFQLCALPM 128 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~g~l~d~~--Grr~~~~~~~~~~ 128 (302)
.+...++..+.......+..++|.+.+ ++|.+.+.+ ..++....+ +.++|.+++|++..|+ ..|.+..+.++..
T Consensus 394 f~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~A--n~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~ 471 (735)
T KOG3626|consen 394 FMLVVLASVIESLAITGYITFLPKYLETQFGISASLA--NILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCS 471 (735)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHH--HHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHH
Confidence 344455555555555566778887765 577766655 455544444 5678889999999876 3455555544444
Q ss_pred HHHHH
Q 022133 129 IIGAS 133 (302)
Q Consensus 129 ~i~~~ 133 (302)
.+..+
T Consensus 472 ~l~l~ 476 (735)
T KOG3626|consen 472 VLSLL 476 (735)
T ss_pred HHHHH
Confidence 44333
No 297
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=62.51 E-value=1.1e+02 Score=29.71 Aligned_cols=44 Identities=11% Similarity=-0.023 Sum_probs=27.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhc-chhHHHHHHHHHHhhhhcch
Q 022133 115 VGRRRAFQLCALPMIIGASISATT-RNLIGMLLGRFVVGTGMGLG 158 (302)
Q Consensus 115 ~Grr~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~r~~~g~~~~~~ 158 (302)
-||.+-++++.++++++.+...+. +..+.+.....+.+++.++.
T Consensus 54 ~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ml 98 (701)
T TIGR01667 54 TGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILL 98 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 467777888888888877766654 44455555555555554443
No 298
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=61.92 E-value=1.3e+02 Score=27.65 Aligned_cols=76 Identities=20% Similarity=0.142 Sum_probs=50.7
Q ss_pred HHHHHHHHhhhhcchhhhHHHHhhhcCCC-CccchhHhHHHHHHHHH-HHHHHHHhhcccccCcchHHHHHHhHHHHHH
Q 022133 144 MLLGRFVVGTGMGLGPTVAALYVTEVSPP-FVRGTYGAFIQIATCLG-LMGSLLIGIPVKEIAGWWRICFWVSIVPAAI 220 (302)
Q Consensus 144 ~~~~r~~~g~~~~~~~~~~~~~~~e~~p~-~~R~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~ 220 (302)
+...-+..|++.......--.-+.+.+|. +++...+|-++...++- .++...+++-+....| |-+...+.-+..++
T Consensus 287 ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~G-W~~~AlitPiv~li 364 (509)
T COG3202 287 IALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVG-WFTGALITPLVMLI 364 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhh-HHHHHHHHHHHHHH
Confidence 33445566777777776666777888886 45777777777766666 5566777888888888 77666554344333
No 299
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=61.86 E-value=1.3e+02 Score=27.70 Aligned_cols=69 Identities=13% Similarity=0.115 Sum_probs=46.9
Q ss_pred HHHHHHHhhhhcchhhhHHHHhhhcCCCC-ccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHh
Q 022133 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPF-VRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS 214 (302)
Q Consensus 145 ~~~r~~~g~~~~~~~~~~~~~~~e~~p~~-~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~ 214 (302)
.+.-+..|+.........-..+.+.+|.+ ++...+|-++...++-..+-.++++.+....| |+....+.
T Consensus 286 a~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~G-W~~~Alit 355 (491)
T PF03219_consen 286 ALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFG-WRTAALIT 355 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHh
Confidence 33445566666666666667777888764 45666777666666666666688888888888 88776653
No 300
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=58.19 E-value=1.1e+02 Score=25.55 Aligned_cols=100 Identities=11% Similarity=0.082 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh-hhhHHHHHHH----HHHHHHHHHHHH-hhc----chhHHHHHHHHHHhhhhcchhhh
Q 022133 92 LVVSMCLGGAFIGSTLSGWIAD-GVGRRRAFQL----CALPMIIGASIS-ATT----RNLIGMLLGRFVVGTGMGLGPTV 161 (302)
Q Consensus 92 ~~~~~~~~~~~i~~~~~g~l~d-~~Grr~~~~~----~~~~~~i~~~~~-~~~----~~~~~~~~~r~~~g~~~~~~~~~ 161 (302)
....++..|..+|.+..|.... .+.||+.+.. +.++.+++.+.. ... .+...+++.-++.|++.=+.+++
T Consensus 145 ~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~V 224 (267)
T PF07672_consen 145 IFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGV 224 (267)
T ss_pred HHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 4445566666677777777775 4556665542 233333333331 111 13556777777777766555555
Q ss_pred HHHHhhhcCCCCccchhHhHHHHHHHHHHHH
Q 022133 162 AALYVTEVSPPFVRGTYGAFIQIATCLGLMG 192 (302)
Q Consensus 162 ~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~ 192 (302)
....-.|. +...+.+..-+++..+++|.++
T Consensus 225 iL~lPhEy-K~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 225 ILNLPHEY-KGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred HhcChhhh-cCCCcceehhHHHHHHHHHHHH
Confidence 44444443 2222333333355566665443
No 301
>COG5547 Small integral membrane protein [Function unknown]
Probab=58.11 E-value=26 Score=21.33 Aligned_cols=39 Identities=10% Similarity=0.022 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhc
Q 022133 118 RRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMG 156 (302)
Q Consensus 118 r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~ 156 (302)
|..++.+.+...++++++.+.---..+++.....|++.|
T Consensus 8 kypIIgglvglliAili~t~GfwKtilviil~~lGv~iG 46 (62)
T COG5547 8 KYPIIGGLVGLLIAILILTFGFWKTILVIILILLGVYIG 46 (62)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566666666666655544333344444555555544
No 302
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=56.85 E-value=22 Score=24.83 Aligned_cols=47 Identities=30% Similarity=0.359 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhh
Q 022133 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT 137 (302)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~ 137 (302)
|-+.+++.-.+++.++++++..|+.-+-+-=.+|..+..++..+..+
T Consensus 57 GRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 57 GRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred hhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 67788898889999999999999987766666776666666555443
No 303
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=56.53 E-value=58 Score=21.84 Aligned_cols=69 Identities=13% Similarity=0.130 Sum_probs=39.9
Q ss_pred hhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHH
Q 022133 152 GTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA 224 (302)
Q Consensus 152 g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~ 224 (302)
|++--...|..+.++.|.--.. ...+....++.+|.++|.+....+..... .+..+..+.+...+....
T Consensus 5 GigRFayTplLP~M~~~~~ls~---~~ag~lasaNy~GYL~GAl~~~~~~~~~~-~~~~~~~~l~~~~~~~~~ 73 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGGLSL---SQAGWLASANYLGYLVGALLASRLPRHSR-PRRLLRAGLLLTVLSTAA 73 (85)
T ss_pred hhHHHHHHhHhHHHHHhcCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHH
Confidence 3333344566777777664332 33456667777888888877777665544 345555554444444333
No 304
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=56.47 E-value=68 Score=22.61 Aligned_cols=23 Identities=22% Similarity=0.208 Sum_probs=12.9
Q ss_pred HHhhhhcchhhhHHHHhhhcCCC
Q 022133 150 VVGTGMGLGPTVAALYVTEVSPP 172 (302)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~e~~p~ 172 (302)
+.+.|.-+.++...++..|...-
T Consensus 58 ~l~tGf~GgfTTFSTf~~e~~~l 80 (108)
T PRK14229 58 ILATGFCGGLTTFSTLNDELQRL 80 (108)
T ss_pred HHHhhHccccccHHHHHHHHHHH
Confidence 34444445555666777766543
No 305
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=55.65 E-value=1e+02 Score=27.57 Aligned_cols=61 Identities=11% Similarity=0.038 Sum_probs=44.8
Q ss_pred HHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCc
Q 022133 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (302)
Q Consensus 145 ~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 205 (302)
+....+.++..-..+....++-+.+.+++.-|+.|++.++...+|+--...+...+.+..+
T Consensus 373 i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 373 ITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 3335555555555566777888999999999999999999999987766666666655443
No 306
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=54.98 E-value=52 Score=24.71 Aligned_cols=24 Identities=21% Similarity=0.260 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhHH
Q 022133 95 SMCLGGAFIGSTLSGWIADGVGRR 118 (302)
Q Consensus 95 ~~~~~~~~i~~~~~g~l~d~~Grr 118 (302)
..|.+|+.++..+.|++.+|..++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~ 83 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRS 83 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhcccc
Confidence 447778889999999999998775
No 307
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=54.95 E-value=49 Score=25.91 Aligned_cols=23 Identities=26% Similarity=0.354 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhH
Q 022133 95 SMCLGGAFIGSTLSGWIADGVGR 117 (302)
Q Consensus 95 ~~~~~~~~i~~~~~g~l~d~~Gr 117 (302)
..|.+++.++.++.|++.||..+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 45778888999999999999875
No 308
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=51.26 E-value=41 Score=31.65 Aligned_cols=62 Identities=11% Similarity=0.098 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccc
Q 022133 141 LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (302)
Q Consensus 141 ~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 202 (302)
..+++--.++.|++.........-+.-+-+|++.|+.+.+++....++|..++.++...+..
T Consensus 458 i~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~ 519 (571)
T KOG1237|consen 458 ILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQF 519 (571)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566668899999988887778888888999999999999999999999998888755543
No 309
>PRK02237 hypothetical protein; Provisional
Probab=51.19 E-value=38 Score=23.77 Aligned_cols=47 Identities=28% Similarity=0.287 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhh
Q 022133 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT 137 (302)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~ 137 (302)
|-+..++.-.+++.++++++..|+.-+-+-=.+|..+..++..+..+
T Consensus 59 GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 59 GRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 67888898889999999999999987665556666666665544433
No 310
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=48.55 E-value=1.7e+02 Score=24.78 Aligned_cols=57 Identities=14% Similarity=-0.003 Sum_probs=34.0
Q ss_pred HHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhccc
Q 022133 144 MLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (302)
Q Consensus 144 ~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~ 201 (302)
.-..|.+.|+-.- .+...++++.-+||.+++-...-=...+.+++.++.|++|-.+.
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455777777553 33567888999999665543333334444445556666665554
No 311
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=48.27 E-value=1.6e+02 Score=24.47 Aligned_cols=24 Identities=4% Similarity=0.059 Sum_probs=14.5
Q ss_pred hHHHHHHhHHHHHHHHHHhhccCC
Q 022133 207 WRICFWVSIVPAAILCLAMVFCAE 230 (302)
Q Consensus 207 w~~~~~~~~~~~~~~~~~~~~~pe 230 (302)
..+.-+++.++.+++..++.+++.
T Consensus 114 ~~~Ln~~G~~l~~~~~~~f~fik~ 137 (254)
T PF07857_consen 114 SPWLNYIGVALVLVSGIIFSFIKS 137 (254)
T ss_pred hhHHHHHHHHHHHHHHHheeeecC
Confidence 345556666666676666666543
No 312
>PRK14230 camphor resistance protein CrcB; Provisional
Probab=47.51 E-value=1e+02 Score=22.13 Aligned_cols=24 Identities=17% Similarity=0.104 Sum_probs=12.8
Q ss_pred HHHHhhhhcchhhhHHHHhhhcCC
Q 022133 148 RFVVGTGMGLGPTVAALYVTEVSP 171 (302)
Q Consensus 148 r~~~g~~~~~~~~~~~~~~~e~~p 171 (302)
|.+.+.|.-+.++...++..|...
T Consensus 60 ~~~l~tGflGgfTTFSTf~~e~~~ 83 (119)
T PRK14230 60 KLLLITGFLGSLTTLSGFSLETVT 83 (119)
T ss_pred HHHHHHHHhchHhhHHHHHHHHHH
Confidence 334444444555566666666553
No 313
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=47.49 E-value=62 Score=21.74 Aligned_cols=41 Identities=22% Similarity=0.233 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhhhhhhhH-------HHHHHHHHHHHHHHHHHHhhcch
Q 022133 100 GAFIGSTLSGWIADGVGR-------RRAFQLCALPMIIGASISATTRN 140 (302)
Q Consensus 100 ~~~i~~~~~g~l~d~~Gr-------r~~~~~~~~~~~i~~~~~~~~~~ 140 (302)
+...+.+.++++.+|.-+ ++.+..+.++...+.+++++..+
T Consensus 30 ~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 30 GATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 334556666777776654 67777777777777777776544
No 314
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=46.00 E-value=1.7e+02 Score=25.76 Aligned_cols=17 Identities=12% Similarity=0.110 Sum_probs=7.4
Q ss_pred HhhcCCchhHHHHHHHH
Q 022133 280 ELLYGRHFRGRYHALVY 296 (302)
Q Consensus 280 ~~~~~~~~~~~~~~~~~ 296 (302)
..++++......+++++
T Consensus 240 ~~~~nP~~~a~~lgli~ 256 (385)
T PF03547_consen 240 KLFKNPPLIAIILGLII 256 (385)
T ss_pred HHHhCcHHHHHHHHHHH
Confidence 33444544444444433
No 315
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=45.18 E-value=71 Score=19.54 Aligned_cols=44 Identities=7% Similarity=0.046 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhhccCCC
Q 022133 187 CLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (302)
Q Consensus 187 ~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~pe~ 231 (302)
-+|.+++.+.+..-....+ .....+++.+.+++..++...+|++
T Consensus 12 il~~vvgyI~ssL~~~~~n-~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 12 ILGEVVGYIGSSLTGVTYN-FTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred HHHHHHHHHHHHHhCCCCC-hHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3444444444444333344 5666667777777666665556554
No 316
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=43.12 E-value=1.1e+02 Score=21.23 Aligned_cols=22 Identities=9% Similarity=0.070 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHhhcccccCc
Q 022133 184 IATCLGLMGSLLIGIPVKEIAG 205 (302)
Q Consensus 184 ~~~~~g~~~~~~~~~~~~~~~g 205 (302)
....+..++|.++|-++-...+
T Consensus 50 ~~~v~pil~G~~lG~WLD~~~~ 71 (100)
T TIGR02230 50 WSVAIPTLLGVAVGIWLDRHYP 71 (100)
T ss_pred HHHHHHHHHHHHHHHHHHhhcC
Confidence 3334445556666666655544
No 317
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=42.21 E-value=85 Score=20.86 Aligned_cols=20 Identities=15% Similarity=0.174 Sum_probs=13.0
Q ss_pred HHHHHHHHHHhhhhhhhHHH
Q 022133 100 GAFIGSTLSGWIADGVGRRR 119 (302)
Q Consensus 100 ~~~i~~~~~g~l~d~~Grr~ 119 (302)
+..+-..+-.+..||..||.
T Consensus 58 ~fviLi~~Ya~~mnrlD~~~ 77 (81)
T PF13937_consen 58 VFVILIFVYAWRMNRLDRKY 77 (81)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34455566677788877764
No 318
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=42.04 E-value=70 Score=22.49 Aligned_cols=29 Identities=21% Similarity=0.265 Sum_probs=13.9
Q ss_pred CCccchhHhHHHHHHHH-HHHHHHHHhhcc
Q 022133 172 PFVRGTYGAFIQIATCL-GLMGSLLIGIPV 200 (302)
Q Consensus 172 ~~~R~~~~~~~~~~~~~-g~~~~~~~~~~~ 200 (302)
++.++.+.++--..--+ |.++|..++.++
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~ll 66 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLL 66 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 34566666664333333 344444444433
No 319
>PLN02601 beta-carotene hydroxylase
Probab=41.83 E-value=2.1e+02 Score=23.96 Aligned_cols=21 Identities=19% Similarity=0.037 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhh
Q 022133 95 SMCLGGAFIGSTLSGWIADGV 115 (302)
Q Consensus 95 ~~~~~~~~i~~~~~g~l~d~~ 115 (302)
.+..++.+++.=++.+++.|+
T Consensus 137 ~al~lgtfvgMEf~Aw~aHKY 157 (303)
T PLN02601 137 FALSVGAAVGMEFWARWAHRA 157 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 334566666666777766654
No 320
>PF15050 SCIMP: SCIMP protein
Probab=41.23 E-value=18 Score=25.70 Aligned_cols=14 Identities=43% Similarity=1.282 Sum_probs=8.8
Q ss_pred cchHHHHHHhHHHH
Q 022133 205 GWWRICFWVSIVPA 218 (302)
Q Consensus 205 g~w~~~~~~~~~~~ 218 (302)
+|||-.||+..+.+
T Consensus 2 ~WWr~nFWiiLAVa 15 (133)
T PF15050_consen 2 SWWRDNFWIILAVA 15 (133)
T ss_pred chHHhchHHHHHHH
Confidence 35888888754333
No 321
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=41.18 E-value=2.5e+02 Score=24.67 Aligned_cols=101 Identities=14% Similarity=0.062 Sum_probs=60.9
Q ss_pred HHHHHHHHHhhhhhhh--HHHHHHHHHHHHHHHHHHHhh--cchh-------------H-HH-HHH----HHHHhhhhcc
Q 022133 101 AFIGSTLSGWIADGVG--RRRAFQLCALPMIIGASISAT--TRNL-------------I-GM-LLG----RFVVGTGMGL 157 (302)
Q Consensus 101 ~~i~~~~~g~l~d~~G--rr~~~~~~~~~~~i~~~~~~~--~~~~-------------~-~~-~~~----r~~~g~~~~~ 157 (302)
.+++.+++-+++|..| ++..+..+..+.+++..+... ..|+ . .+ .+. -++.|+..+.
T Consensus 176 AI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i~~d~ril~LG~~qsl 255 (354)
T PF05631_consen 176 AIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSFREAWRAILSDPRILLLGLIQSL 255 (354)
T ss_pred HHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHHHHHHHHHHcCchhHHHHHHHHH
Confidence 3444555556667654 577777777777766655432 2211 0 01 111 1456777788
Q ss_pred hhhhHHHHhhhcCCCCc---cchhHhHHHHHHHHHHHHHHHHhhccc
Q 022133 158 GPTVAALYVTEVSPPFV---RGTYGAFIQIATCLGLMGSLLIGIPVK 201 (302)
Q Consensus 158 ~~~~~~~~~~e~~p~~~---R~~~~~~~~~~~~~g~~~~~~~~~~~~ 201 (302)
....++.++-.|.|.-. +..=.|+......+..++|..+...+.
T Consensus 256 FE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l~ 302 (354)
T PF05631_consen 256 FEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRLL 302 (354)
T ss_pred HHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999988643 445566666666666666666664433
No 322
>COG3619 Predicted membrane protein [Function unknown]
Probab=40.78 E-value=2e+02 Score=23.43 Aligned_cols=31 Identities=13% Similarity=0.147 Sum_probs=19.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhhhhhhH
Q 022133 87 TLAEGLVVSMCLGGAFIGSTLSGWIADGVGR 117 (302)
Q Consensus 87 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Gr 117 (302)
+...........+..++|......+..+..|
T Consensus 54 ~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 54 DAALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3333556666677777776666666666654
No 323
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=40.68 E-value=1e+02 Score=26.94 Aligned_cols=47 Identities=17% Similarity=0.174 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhh
Q 022133 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT 137 (302)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~ 137 (302)
.+.....++|..++..+.+++-|++|....+.+..+++.++.+.+..
T Consensus 75 ~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 75 NWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 46777788899999999999999999999999998888888877665
No 324
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=40.21 E-value=30 Score=28.02 Aligned_cols=46 Identities=20% Similarity=0.160 Sum_probs=28.4
Q ss_pred HHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHH
Q 022133 148 RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSL 194 (302)
Q Consensus 148 r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~ 194 (302)
..-.|+|.|...+....-+.+.+| +......++...++.+.++.|-
T Consensus 178 AMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~ 223 (241)
T PF11299_consen 178 AMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGL 223 (241)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHH
Confidence 445677777777777777888886 4455555555555544444443
No 325
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=37.60 E-value=89 Score=21.05 Aligned_cols=34 Identities=18% Similarity=0.458 Sum_probs=22.0
Q ss_pred hHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCc
Q 022133 141 LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFV 174 (302)
Q Consensus 141 ~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~ 174 (302)
-+=++++|.+.|-+.+..-........|+-|...
T Consensus 31 t~RL~iGR~ilGs~~S~~Aga~Li~~Pdl~plAv 64 (89)
T PF04550_consen 31 TLRLFIGRVILGSAVSVVAGAALIQFPDLPPLAV 64 (89)
T ss_pred chhHHhHHHHHhhHHHHHHHHHHhcCCCCCHHHH
Confidence 3446777888887777666666666666665543
No 326
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=37.48 E-value=2.4e+02 Score=23.36 Aligned_cols=24 Identities=17% Similarity=0.286 Sum_probs=10.8
Q ss_pred HhhhcCCCCccchhHhHHHHHHHHHH
Q 022133 165 YVTEVSPPFVRGTYGAFIQIATCLGL 190 (302)
Q Consensus 165 ~~~e~~p~~~R~~~~~~~~~~~~~g~ 190 (302)
.+....| .|+...++...+.++|.
T Consensus 56 ~~~k~lP--rk~~~~~~l~gg~~~~~ 79 (249)
T PF10225_consen 56 QLSKLLP--RKSMFYAVLYGGWSFGL 79 (249)
T ss_pred HHHHHcc--CcchhHHHHhhhhHHHH
Confidence 3556677 34443333333334443
No 327
>PF04474 DUF554: Protein of unknown function (DUF554); InterPro: IPR007563 This is a family of uncharacterised prokaryotic proteins. Multiple predicted transmembrane regions suggest that the protein is membrane associated.
Probab=36.75 E-value=2e+02 Score=23.44 Aligned_cols=61 Identities=25% Similarity=0.278 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhc
Q 022133 95 SMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMG 156 (302)
Q Consensus 95 ~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~ 156 (302)
.+..+|..+|..+..++.||+........|.....++.-...-.++...+ +.-++.|--.|
T Consensus 9 ~aIl~G~~iG~~~~~~i~~~~~~~l~~~~Gl~~l~iGi~~~~~~~~~~~v-i~slvlG~iiG 69 (226)
T PF04474_consen 9 LAILLGGLIGLLLGRRIPERIKDTLMQALGLCVLAIGISMALKGQNPLLV-ILSLVLGTIIG 69 (226)
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHhhHHHHHHHHHHHHccCccHHH-HHHHHHHHHHH
Confidence 44556778888888999999976666666666666655444434444443 33444443333
No 328
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=36.59 E-value=31 Score=28.85 Aligned_cols=64 Identities=14% Similarity=0.178 Sum_probs=42.3
Q ss_pred HHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHh---------hhhhhhHHHHH
Q 022133 56 ATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGW---------IADGVGRRRAF 121 (302)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~---------l~d~~Grr~~~ 121 (302)
...+-+..........+++-.+.++.|.+++.. ..++.+..+..++..++.|. -.||+|||...
T Consensus 22 yGvGHmlNDitAScWFTYlllfltqiglsp~~~--AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 22 YGVGHMLNDITASCWFTYLLLFLTQIGLSPSSR--AMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred echhHHHhhHHHHHHHHHHHHHHHHhcCCcchh--HHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 344555555555555566666777788877665 46666666777778777763 35789998754
No 329
>COG1422 Predicted membrane protein [Function unknown]
Probab=36.43 E-value=2.2e+02 Score=22.63 Aligned_cols=11 Identities=18% Similarity=0.163 Sum_probs=5.1
Q ss_pred HHHHHHHHHhh
Q 022133 188 LGLMGSLLIGI 198 (302)
Q Consensus 188 ~g~~~~~~~~~ 198 (302)
+...++|+++.
T Consensus 33 ln~~f~P~i~~ 43 (201)
T COG1422 33 LNVVFGPLLSP 43 (201)
T ss_pred HHHHHhhhccc
Confidence 34444555543
No 330
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=36.13 E-value=2.1e+02 Score=25.38 Aligned_cols=38 Identities=13% Similarity=-0.068 Sum_probs=20.2
Q ss_pred hhcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCC
Q 022133 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPF 173 (302)
Q Consensus 136 ~~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~ 173 (302)
++.+|+.....--++..+..-...+..+.++.|.+=.+
T Consensus 229 ~~gNsF~v~~~~~v~~ai~~F~vl~ii~~i~~E~~L~~ 266 (374)
T PF01528_consen 229 AIGNSFYVSVSDMVFGAINVFAVLSIIYLIVIEVVLAR 266 (374)
T ss_pred HHhcceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566544433334444444445566777777776433
No 331
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=35.16 E-value=1e+02 Score=18.41 Aligned_cols=32 Identities=19% Similarity=0.273 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHhhhh-hhhHHHHHHHHHHH
Q 022133 96 MCLGGAFIGSTLSGWIAD-GVGRRRAFQLCALP 127 (302)
Q Consensus 96 ~~~~~~~i~~~~~g~l~d-~~Grr~~~~~~~~~ 127 (302)
...++.++.....|+..| ++|.++...+..++
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~l 40 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLL 40 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 334445555666666666 46765554444333
No 332
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=33.27 E-value=4.2e+02 Score=25.00 Aligned_cols=81 Identities=16% Similarity=0.050 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHhhhhcchhhhHHHHhhhc
Q 022133 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR-NLIGMLLGRFVVGTGMGLGPTVAALYVTEV 169 (302)
Q Consensus 91 ~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~ 169 (302)
|+..-++.+|...|.-+..-+.. .|-+..+ ++.++..+..++..+.. .+.-+-....+-.++.+...+....+..|.
T Consensus 453 GL~lFla~vG~~aG~~f~~~l~~-~G~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~t~~l~~a~~~ 530 (562)
T TIGR03802 453 GLALFIAVVGLSAGPQAVTAIKE-MGLTLFL-LGIVVTILPLIITMLIGKYVLKYDPALLLGALAGARTATPALGAVLER 530 (562)
T ss_pred hHHHHHHHHHHhhhHHHHHHHHH-hhHHHHH-HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhccCCCcHHHHHHHHh
Confidence 55666666666666666665533 5555443 44444433333222111 100000111222233334455666777777
Q ss_pred CCCC
Q 022133 170 SPPF 173 (302)
Q Consensus 170 ~p~~ 173 (302)
.+.+
T Consensus 531 ~~~~ 534 (562)
T TIGR03802 531 AGSS 534 (562)
T ss_pred cCCC
Confidence 6543
No 333
>PRK14212 camphor resistance protein CrcB; Provisional
Probab=33.26 E-value=1.9e+02 Score=21.05 Aligned_cols=23 Identities=13% Similarity=-0.013 Sum_probs=12.0
Q ss_pred HHhhhhcchhhhHHHHhhhcCCC
Q 022133 150 VVGTGMGLGPTVAALYVTEVSPP 172 (302)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~e~~p~ 172 (302)
+.+.|.-+.++...++..|....
T Consensus 68 ~l~tGflGgfTTFSTf~~E~~~l 90 (128)
T PRK14212 68 MLTAGFLGAFTTFSTFSYETLDC 90 (128)
T ss_pred HHHhhHhcCcccHHHHHHHHHHH
Confidence 33444444455566666666543
No 334
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=32.98 E-value=1.2e+02 Score=28.17 Aligned_cols=30 Identities=17% Similarity=0.045 Sum_probs=13.8
Q ss_pred CCccchhHhHHHHHHHHHHHHHHHHhhccc
Q 022133 172 PFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (302)
Q Consensus 172 ~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~ 201 (302)
++.||..+...-....+++.++..+++.+.
T Consensus 292 ~~~rg~l~t~~i~~y~~~~~iaGy~S~~~y 321 (521)
T PF02990_consen 292 PNNRGSLLTAAIILYALTSFIAGYVSARLY 321 (521)
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 344555544444444444444444444433
No 335
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=32.89 E-value=3.1e+02 Score=25.11 Aligned_cols=46 Identities=9% Similarity=0.122 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhhccCC
Q 022133 185 ATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAE 230 (302)
Q Consensus 185 ~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~pe 230 (302)
...++....++...-+.+....|+..++++-+..+...+...++|.
T Consensus 408 ~~~~~y~~~~F~lls~~~~~~~~~svyf~~hi~~~~~~~~~~~~~~ 453 (465)
T PLN02332 408 VLVLNYSCVGFMLLSLDETLAAYGSVYYIGTIIPVVLILLGSVVKP 453 (465)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3334444444443333333333666666665555554444445554
No 336
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=32.81 E-value=2.4e+02 Score=22.05 Aligned_cols=39 Identities=18% Similarity=0.069 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 022133 97 CLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS 135 (302)
Q Consensus 97 ~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~ 135 (302)
..+...++.++.-.+..|.++|-.+.+..++.++..+++
T Consensus 37 ~~i~ali~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~ 75 (186)
T PF09605_consen 37 PAIAALICGIVYMLMVAKVPKRGAFLIMGIIMGLIFFLM 75 (186)
T ss_pred HHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHH
Confidence 444556777788888899999988877776666554444
No 337
>COG0385 Predicted Na+-dependent transporter [General function prediction only]
Probab=32.59 E-value=3.3e+02 Score=23.54 Aligned_cols=111 Identities=12% Similarity=-0.006 Sum_probs=65.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhh-----cchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHH
Q 022133 115 VGRRRAFQLCALPMIIGASISAT-----TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLG 189 (302)
Q Consensus 115 ~Grr~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g 189 (302)
..|.+..+++.+...+-.-+.++ .+-...+.++-++.|.+-|+..+...++++ +-+-+.+.+......-+|
T Consensus 64 ~~~p~~vligl~~qfvlmPlla~~~~~~~~l~~~l~~Gl~ll~~~Pggv~S~~~t~lA----kGnValsV~~tsvStll~ 139 (319)
T COG0385 64 LKHPRLVLIGLAAQFVLMPLLALLLAKLFPLPPELAVGLLLLGCCPGGVASNAMTYLA----KGNVALSVCSTSVSTLLG 139 (319)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHhHHheeeCCCchhHHHHHHHh----cCcHHHHHHHHHHHHHHH
Confidence 34455555555554333322222 234466788888899888887766555554 334455666677788888
Q ss_pred HHHHHHHhhcccccC---cchHHH---HHHhHHHHHHHHHHhhccC
Q 022133 190 LMGSLLIGIPVKEIA---GWWRIC---FWVSIVPAAILCLAMVFCA 229 (302)
Q Consensus 190 ~~~~~~~~~~~~~~~---g~w~~~---~~~~~~~~~~~~~~~~~~p 229 (302)
.++.|++-..+.... +.|... .....++.+++.+...+.|
T Consensus 140 ~f~tPllv~l~~~~~v~~~~~~m~~~i~~~vllP~~LG~~~r~~~~ 185 (319)
T COG0385 140 PFLTPLLVGLLAGGGVPVDVGGMFLSILLQVLLPFVLGQLLRPLLP 185 (319)
T ss_pred HHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888877766532 124332 2334455555666665555
No 338
>PRK14200 camphor resistance protein CrcB; Provisional
Probab=32.44 E-value=2e+02 Score=20.97 Aligned_cols=24 Identities=17% Similarity=0.167 Sum_probs=12.5
Q ss_pred HHHHhhhhcchhhhHHHHhhhcCC
Q 022133 148 RFVVGTGMGLGPTVAALYVTEVSP 171 (302)
Q Consensus 148 r~~~g~~~~~~~~~~~~~~~e~~p 171 (302)
|.+.+.|.-+.++...++..|...
T Consensus 69 ~~~l~tGf~GgfTTFSTf~~E~~~ 92 (127)
T PRK14200 69 RQIIGLGFLGALTTFSTFSMDNVL 92 (127)
T ss_pred HHHHHHHHhccchhHHHHHHHHHH
Confidence 333444444445556666666654
No 339
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=32.28 E-value=3e+02 Score=23.01 Aligned_cols=6 Identities=0% Similarity=0.606 Sum_probs=2.4
Q ss_pred HHHHHh
Q 022133 209 ICFWVS 214 (302)
Q Consensus 209 ~~~~~~ 214 (302)
+..+++
T Consensus 131 ~T~~~~ 136 (294)
T KOG2881|consen 131 YTYYLA 136 (294)
T ss_pred HHHHHH
Confidence 333443
No 340
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=32.19 E-value=1.1e+02 Score=22.82 Aligned_cols=24 Identities=21% Similarity=0.261 Sum_probs=18.1
Q ss_pred HhhhcCCCCccchhHhHHHHHHHH
Q 022133 165 YVTEVSPPFVRGTYGAFIQIATCL 188 (302)
Q Consensus 165 ~~~e~~p~~~R~~~~~~~~~~~~~ 188 (302)
-+.|++|+..|....+.++.....
T Consensus 57 ALkDm~Pp~~R~~i~~~~s~t~s~ 80 (145)
T TIGR00986 57 ALKDIVPPTTRGWIYHKYSTTTNF 80 (145)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHH
Confidence 467999999999888776655443
No 341
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=32.01 E-value=1.1e+02 Score=21.37 Aligned_cols=25 Identities=8% Similarity=0.385 Sum_probs=16.9
Q ss_pred hHHHHHHhHHHH-HHHHHHhhccCCC
Q 022133 207 WRICFWVSIVPA-AILCLAMVFCAES 231 (302)
Q Consensus 207 w~~~~~~~~~~~-~~~~~~~~~~pe~ 231 (302)
|..+++++..++ +++.+.+.+.|++
T Consensus 59 we~~~f~~~~~~~v~~~~~~~y~PD~ 84 (105)
T PF10183_consen 59 WELPFFFGFSGSLVFGGVFLAYKPDT 84 (105)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 888888765444 4455566677887
No 342
>PF04120 Iron_permease: Low affinity iron permease ; InterPro: IPR007251 Although originally identified as a low-affinity iron(II) permease [, ], Fet4 has since been shown to import several other transition metal ions, including copper [, ] and zinc []. Copper, cobalt, and cadmium inhibit Fet4 [, ]. Fet4 is an integral protein of the plasma membrane [, ]. FET4 is not essential, not even in fet3 fet4 double mutants []. Over expression of FET4 improves growth under alkaline conditions []. Transcription of FET4 is induced by Aft1 in response to low levels of iron [, , ] or by Zap1 in response to low zinc [, ], but not in response to low copper []. When the high-affinity iron permease component Fet3 is deleted, FET4 is induced by the addition of copper, zinc, cobalt, or manganese []. It is also induced under anaerobic conditions [, , ] and repressed by Rox1 in aerobic conditions [, ]. Rox1 attenuates the activation of FET4 by Aft1 or Zap1 []. ; GO: 0055085 transmembrane transport
Probab=31.17 E-value=1.9e+02 Score=21.28 Aligned_cols=46 Identities=13% Similarity=0.274 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHHHHHHHhhccCCC
Q 022133 184 IATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (302)
Q Consensus 184 ~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~pe~ 231 (302)
....+..+++-++.|.+....+.|+.. +.....++.++..+++..+
T Consensus 18 f~~~~~~Ii~W~i~Gp~~~~sdtWQLv--iNt~ttIitFlmvfLIQn~ 63 (132)
T PF04120_consen 18 FVIAVAVIIVWAISGPVFGFSDTWQLV--INTATTIITFLMVFLIQNT 63 (132)
T ss_pred HHHHHHHHHHHHHHhccccCcchHHHH--HccHHHHHHHHHHHHHHhh
Confidence 334445556666666666555545544 4445555565556666554
No 343
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.86 E-value=26 Score=30.17 Aligned_cols=8 Identities=13% Similarity=-0.026 Sum_probs=3.1
Q ss_pred HHHHHHHH
Q 022133 187 CLGLMGSL 194 (302)
Q Consensus 187 ~~g~~~~~ 194 (302)
+.|++++.
T Consensus 224 g~~gfl~~ 231 (372)
T KOG2927|consen 224 GAGGFLAF 231 (372)
T ss_pred chhHHHHH
Confidence 33334443
No 344
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=30.72 E-value=99 Score=19.00 Aligned_cols=19 Identities=21% Similarity=0.329 Sum_probs=15.6
Q ss_pred hHHHHHHhHHHHHHHHHHh
Q 022133 207 WRICFWVSIVPAAILCLAM 225 (302)
Q Consensus 207 w~~~~~~~~~~~~~~~~~~ 225 (302)
||...+++++++++++-++
T Consensus 5 ~r~~~~~ggfVg~iG~a~Y 23 (58)
T PF15061_consen 5 WRYALFVGGFVGLIGAALY 23 (58)
T ss_pred ccchhhHHHHHHHHHHHHh
Confidence 8999999988888876655
No 345
>PRK10692 hypothetical protein; Provisional
Probab=30.44 E-value=1.4e+02 Score=20.07 Aligned_cols=17 Identities=29% Similarity=0.274 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHHHHH
Q 022133 117 RRRAFQLCALPMIIGAS 133 (302)
Q Consensus 117 rr~~~~~~~~~~~i~~~ 133 (302)
||...++|.++++++.+
T Consensus 3 Rk~a~~~GN~lMglGmv 19 (92)
T PRK10692 3 RKNASLLGNVLMGLGLV 19 (92)
T ss_pred chhhHHHhhHHHHHHHH
Confidence 44455555555544443
No 346
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=30.21 E-value=5.5e+02 Score=25.51 Aligned_cols=11 Identities=18% Similarity=0.129 Sum_probs=5.4
Q ss_pred HHHHHHHHHHH
Q 022133 53 VLVATLSSFLF 63 (302)
Q Consensus 53 ~~~~~~~~~~~ 63 (302)
++.++++.++.
T Consensus 13 l~~~~lG~~ll 23 (810)
T TIGR00844 13 VAYSCVGIFSS 23 (810)
T ss_pred hHHHHHHHHHH
Confidence 44555555443
No 347
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=30.21 E-value=4.1e+02 Score=23.88 Aligned_cols=91 Identities=14% Similarity=0.140 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhcchhh----hHHHH
Q 022133 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPT----VAALY 165 (302)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~~~~~~~~----~~~~~ 165 (302)
...+.+...+...+++++-+....+.-|-+......+.............++.....+-++.|+....... .....
T Consensus 39 ~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~i~~~~~~~~~~~~~~~~g~~i~~gl~~~ll~~~~~~~~~~~ 118 (415)
T TIGR00801 39 TQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAFVSPMIAIGSGLGIPAIMGALIATGLVYTLLSLLIKKLGPRW 118 (415)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 36788888888889999988766543111222222212211222222223444444444445544333221 12234
Q ss_pred hhhcCCCCccchhHh
Q 022133 166 VTEVSPPFVRGTYGA 180 (302)
Q Consensus 166 ~~e~~p~~~R~~~~~ 180 (302)
+.+.+|+...+....
T Consensus 119 i~~~~Pp~v~g~iv~ 133 (415)
T TIGR00801 119 LMKLFPPVVTGPVVM 133 (415)
T ss_pred HHhcCCchhHHHhHH
Confidence 577888888776433
No 348
>COG1811 Uncharacterized membrane protein, possible Na+ channel or pump [General function prediction only]
Probab=29.25 E-value=3.1e+02 Score=22.17 Aligned_cols=53 Identities=21% Similarity=0.177 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 022133 95 SMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLG 147 (302)
Q Consensus 95 ~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 147 (302)
....+|..+|..+...+.||+-+-.+-..|.....++.-...-+++....++.
T Consensus 10 l~Il~G~iiG~l~~~klper~k~~l~~~~Gl~~l~iGI~m~~~~~n~~~~ils 62 (228)
T COG1811 10 LAILIGGIIGLLIGKKLPERIKDILMQCLGLAILGIGIKMALQAKNDIMILLA 62 (228)
T ss_pred HHHHHHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHH
Confidence 33456777888888889999855555566666666665555556676655443
No 349
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=29.21 E-value=3.7e+02 Score=23.06 Aligned_cols=94 Identities=13% Similarity=-0.124 Sum_probs=55.5
Q ss_pred HHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH-HHh-hcchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHh
Q 022133 103 IGSTLSGWIADGVGRRRAFQLCALPMIIGAS-ISA-TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGA 180 (302)
Q Consensus 103 i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~-~~~-~~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~ 180 (302)
+..-+++.++||-|.-.+=+=|..+....+. ... .+.+++.=+ +.+...|........+++.-...++--.+.+
T Consensus 22 llaaLG~l~sERsGVlNIglEG~M~~gAf~~~~~~~~t~spw~gl----~~a~l~g~l~~ll~a~~ti~l~~nqiisG~a 97 (304)
T COG1079 22 LLAALGGLFSERSGVLNIGLEGIMLLGAFSGALFAYGTGSPWLGL----LAAALVGALFGLLHAFLTIKLRANQIISGLA 97 (304)
T ss_pred HHHHHHHHHHHHhceeeechhhHHHHHHHHHHHHHHccccHHHHH----HHHHHHHHHHHHHHHHHHHhhccccchhHHH
Confidence 4455678888998775543333322222111 112 233444333 3344445555677778887777788788888
Q ss_pred HHHHHHHHHHHHHHHHhhcc
Q 022133 181 FIQIATCLGLMGSLLIGIPV 200 (302)
Q Consensus 181 ~~~~~~~~g~~~~~~~~~~~ 200 (302)
+...+..+..+++....+..
T Consensus 98 lnl~a~Glt~fl~~~~~~~~ 117 (304)
T COG1079 98 LNLLASGLTAFLGQSIFGQP 117 (304)
T ss_pred HHHHHHHHHHHHHHHHhccC
Confidence 88888888877776665544
No 350
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=29.01 E-value=1.1e+02 Score=22.68 Aligned_cols=23 Identities=17% Similarity=0.343 Sum_probs=17.6
Q ss_pred HhhhcCCCCccchhHhHHHHHHH
Q 022133 165 YVTEVSPPFVRGTYGAFIQIATC 187 (302)
Q Consensus 165 ~~~e~~p~~~R~~~~~~~~~~~~ 187 (302)
-+.|++|+..|....+.++....
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~ 81 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSS 81 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHH
Confidence 35799999999988877665444
No 351
>PRK14228 camphor resistance protein CrcB; Provisional
Probab=28.58 E-value=2.3e+02 Score=20.46 Aligned_cols=22 Identities=18% Similarity=0.155 Sum_probs=11.5
Q ss_pred HHhhhhcchhhhHHHHhhhcCC
Q 022133 150 VVGTGMGLGPTVAALYVTEVSP 171 (302)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~e~~p 171 (302)
+.+.|.-+.++...++..|...
T Consensus 66 ~l~tGf~GgfTTFSTf~~e~~~ 87 (122)
T PRK14228 66 LAGTAFVGAYTTFSTWMLETQR 87 (122)
T ss_pred HHHHHHhcchhhHHHHHHHHHH
Confidence 3344444445556666666553
No 352
>TIGR03647 Na_symport_sm probable solute:sodium symporter small subunit. Members of this family are highly hydrophobic bacterial proteins of about 90 amino acids in length. Members usually are found immediately upstream (sometimes fused to) a member of the solute:sodium symporter family, and therefore are a putative sodium:solute symporter small subunit. Members tend to be found in aquatic species, especially those from marine or other high salt environments.
Probab=28.48 E-value=1.8e+02 Score=19.14 Aligned_cols=20 Identities=10% Similarity=0.159 Sum_probs=13.4
Q ss_pred HHHHHHHHHHhhhhhhhHHH
Q 022133 100 GAFIGSTLSGWIADGVGRRR 119 (302)
Q Consensus 100 ~~~i~~~~~g~l~d~~Grr~ 119 (302)
...+-..+-.+..||.-||.
T Consensus 54 ~fviLi~~Ya~~m~rlD~~~ 73 (77)
T TIGR03647 54 VFVVLIFVYAWRMNRLDRKY 73 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 34455566777888887764
No 353
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=28.46 E-value=1.7e+02 Score=25.93 Aligned_cols=37 Identities=19% Similarity=0.073 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Q 022133 92 LVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (302)
Q Consensus 92 ~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~ 131 (302)
.+.+...+...+++++-+. +.|.|..+.-+.....+.
T Consensus 37 ~li~at~l~sgi~Tllq~~---~~g~~lpl~~G~s~~~~~ 73 (389)
T PF00860_consen 37 ALISATFLVSGIATLLQGL---PAGHRLPLVPGPSFAFIF 73 (389)
T ss_dssp --HHHHHHHHHHHHHHHHH---HTTT-----EEE-GGGHH
T ss_pred HHHHHHHHHHHHHHHHHHh---cCCCceecccccchhhhh
Confidence 5566667777788888887 677777766555544444
No 354
>PF13038 DUF3899: Domain of unknown function (DUF3899)
Probab=28.46 E-value=1.6e+02 Score=19.73 Aligned_cols=16 Identities=25% Similarity=0.264 Sum_probs=7.6
Q ss_pred HHHHHhHHHHHHHHHH
Q 022133 209 ICFWVSIVPAAILCLA 224 (302)
Q Consensus 209 ~~~~~~~~~~~~~~~~ 224 (302)
..|+++.+..+++.+.
T Consensus 4 ~~Fl~~l~lliig~~~ 19 (92)
T PF13038_consen 4 ILFLVGLILLIIGGFL 19 (92)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3455554444444443
No 355
>PRK14214 camphor resistance protein CrcB; Provisional
Probab=26.36 E-value=2.5e+02 Score=20.14 Aligned_cols=24 Identities=25% Similarity=0.313 Sum_probs=12.6
Q ss_pred HHHHhhhhcchhhhHHHHhhhcCC
Q 022133 148 RFVVGTGMGLGPTVAALYVTEVSP 171 (302)
Q Consensus 148 r~~~g~~~~~~~~~~~~~~~e~~p 171 (302)
|.+.+.|.-+.++...++..|...
T Consensus 62 ~~~l~tGf~GgfTTFSTf~~e~~~ 85 (118)
T PRK14214 62 QLFLGTGFMGGYTTFSTFKVESME 85 (118)
T ss_pred HHHHHHHHcccchhHHHHHHHHHH
Confidence 334444444445556666666654
No 356
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=26.20 E-value=5.7e+02 Score=25.27 Aligned_cols=26 Identities=23% Similarity=0.341 Sum_probs=14.3
Q ss_pred HHHHHHHhhhhcchhhhHHHHhhhcC
Q 022133 145 LLGRFVVGTGMGLGPTVAALYVTEVS 170 (302)
Q Consensus 145 ~~~r~~~g~~~~~~~~~~~~~~~e~~ 170 (302)
+++-+..|.+.|...++...++.-+.
T Consensus 187 l~~a~~gG~~~Gaa~Gv~~Gli~~l~ 212 (764)
T TIGR02865 187 LLISYIGGSGAGAAGGVVIGVILGLA 212 (764)
T ss_pred HHHHHhcCchHhHHHHHHHHHHHHhc
Confidence 34445566666666555555555444
No 357
>COG4769 Predicted membrane protein [Function unknown]
Probab=26.13 E-value=1.1e+02 Score=23.52 Aligned_cols=50 Identities=26% Similarity=0.119 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHhh
Q 022133 98 LGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGT 153 (302)
Q Consensus 98 ~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~g~ 153 (302)
.+...+.+...-++..++|+|..=++|... .-++.+|..++++.+++.+-
T Consensus 83 sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 83 SFAGAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHhHHHHHHHHHHHhc
Confidence 334445556666777788877653222221 22356777777777777654
No 358
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=26.08 E-value=1.5e+02 Score=19.74 Aligned_cols=16 Identities=38% Similarity=0.526 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHHHH
Q 022133 117 RRRAFQLCALPMIIGA 132 (302)
Q Consensus 117 rr~~~~~~~~~~~i~~ 132 (302)
||...++|.++++++.
T Consensus 3 Rk~a~~~GN~lMglGm 18 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGM 18 (89)
T ss_pred chhhHHHhhHHHHHhH
Confidence 4444455555544443
No 359
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=25.98 E-value=3.4e+02 Score=21.56 Aligned_cols=20 Identities=20% Similarity=0.306 Sum_probs=10.7
Q ss_pred HHHHHhHHHHHHHHHHhhcc
Q 022133 209 ICFWVSIVPAAILCLAMVFC 228 (302)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~ 228 (302)
...++..++++++....+++
T Consensus 178 l~~~~~iiig~i~~~~~~~l 197 (206)
T PF06570_consen 178 LPPWVYIIIGVIAFALRFYL 197 (206)
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 33444455556665555554
No 360
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=25.46 E-value=5.3e+02 Score=23.60 Aligned_cols=100 Identities=19% Similarity=0.179 Sum_probs=59.4
Q ss_pred hhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhc---chhHHHHHHHHHHhhh
Q 022133 78 SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT---RNLIGMLLGRFVVGTG 154 (302)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~r~~~g~~ 154 (302)
..+.|++.++. ..+.+.-.+.+.+++++--....+.|-|.....+.....++.++.... ......+.+-+..|+.
T Consensus 41 g~a~~l~~~~~--~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~~ 118 (451)
T COG2233 41 GLALGLSAEDT--AYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGGTTGDGIAALLGGIIAAGLV 118 (451)
T ss_pred ccCCCCCHHHH--HHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHHHhccCCchHHHHHHHHHHHHH
Confidence 45567766665 688888888888888877664434554555555554444444433322 2355555556666655
Q ss_pred hcchhhhHHHHhhhcCCCCccchhH
Q 022133 155 MGLGPTVAALYVTEVSPPFVRGTYG 179 (302)
Q Consensus 155 ~~~~~~~~~~~~~e~~p~~~R~~~~ 179 (302)
.....+.....+..+|||-.-|..+
T Consensus 119 ~~li~~~~~~~l~rlfPPvVtG~Vi 143 (451)
T COG2233 119 YFLISPIVKIRLARLFPPVVTGPVV 143 (451)
T ss_pred HHHHHHHHHHHHHHhCCCceEEeEe
Confidence 5444333322777889988777543
No 361
>PF08570 DUF1761: Protein of unknown function (DUF1761); InterPro: IPR013879 This entry shows conserved fungal proteins with unknown function.
Probab=25.30 E-value=2.6e+02 Score=20.05 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHhhhhccchhhhhhhhhcccCCcc
Q 022133 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNT 87 (302)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (302)
+++..+..+..+...+... +-....+..|.+.++
T Consensus 4 vlvaa~~~~~~G~lWY~pl-Fg~~W~~~~g~~~~~ 37 (126)
T PF08570_consen 4 VLVAAIAAFVLGFLWYGPL-FGKAWMRAMGITPED 37 (126)
T ss_pred HHHHHHHHHHHHHHHHhHH-HHHHHHHHcCCCccc
Confidence 4445555555555443332 555667777776555
No 362
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=25.13 E-value=2e+02 Score=18.72 Aligned_cols=19 Identities=26% Similarity=0.190 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHhhhhhh
Q 022133 97 CLGGAFIGSTLSGWIADGV 115 (302)
Q Consensus 97 ~~~~~~i~~~~~g~l~d~~ 115 (302)
.....++.+++.|++.+.+
T Consensus 16 il~~~~iisfi~Gy~~q~~ 34 (76)
T PF06645_consen 16 ILIISAIISFIVGYITQSF 34 (76)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3334445555666665554
No 363
>PRK09609 hypothetical protein; Provisional
Probab=24.97 E-value=3.1e+02 Score=23.54 Aligned_cols=7 Identities=0% Similarity=0.240 Sum_probs=3.1
Q ss_pred hHHHHHH
Q 022133 207 WRICFWV 213 (302)
Q Consensus 207 w~~~~~~ 213 (302)
|...|.+
T Consensus 78 ffPgFTL 84 (312)
T PRK09609 78 YHPYYTL 84 (312)
T ss_pred cCHHHHH
Confidence 4444443
No 364
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=24.36 E-value=2.6e+02 Score=21.65 Aligned_cols=10 Identities=30% Similarity=0.501 Sum_probs=3.9
Q ss_pred HHHHHHHHHH
Q 022133 98 LGGAFIGSTL 107 (302)
Q Consensus 98 ~~~~~i~~~~ 107 (302)
.+|+.+|..+
T Consensus 89 ~lG~L~GP~~ 98 (173)
T PF08566_consen 89 ALGWLVGPSL 98 (173)
T ss_pred HHHHHhcchH
Confidence 3344444333
No 365
>PRK14227 camphor resistance protein CrcB; Provisional
Probab=24.29 E-value=2.8e+02 Score=20.05 Aligned_cols=22 Identities=18% Similarity=0.107 Sum_probs=11.7
Q ss_pred HHhhhhcchhhhHHHHhhhcCC
Q 022133 150 VVGTGMGLGPTVAALYVTEVSP 171 (302)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~e~~p 171 (302)
+.+.|.-+.++...++..|...
T Consensus 68 ~l~tGf~GgfTTFSTf~~E~~~ 89 (124)
T PRK14227 68 FVAVGFCGSFTTFSSFTYETIA 89 (124)
T ss_pred HHHhhHhcccccHHHHHHHHHH
Confidence 3344444445566666666654
No 366
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=24.16 E-value=1.9e+02 Score=18.13 Aligned_cols=15 Identities=13% Similarity=-0.044 Sum_probs=8.9
Q ss_pred hHHHHhhhcCCCCcc
Q 022133 161 VAALYVTEVSPPFVR 175 (302)
Q Consensus 161 ~~~~~~~e~~p~~~R 175 (302)
....+++|..+.+.+
T Consensus 47 ~l~G~isE~i~~~Kg 61 (63)
T PF06341_consen 47 FLAGLISEFISKQKG 61 (63)
T ss_pred HHHHHHHHHHhhccC
Confidence 344667777766433
No 367
>PRK14206 camphor resistance protein CrcB; Provisional
Probab=23.97 E-value=2.9e+02 Score=20.07 Aligned_cols=24 Identities=21% Similarity=0.169 Sum_probs=13.2
Q ss_pred HHHHhhhhcchhhhHHHHhhhcCC
Q 022133 148 RFVVGTGMGLGPTVAALYVTEVSP 171 (302)
Q Consensus 148 r~~~g~~~~~~~~~~~~~~~e~~p 171 (302)
|.+.+.|.-+.++...++..|.+.
T Consensus 67 ~~~l~tGf~GgfTTFSTf~~e~~~ 90 (127)
T PRK14206 67 RLFVMVGVCGGFTTFSSFSLQTLN 90 (127)
T ss_pred HHHHHHHHccccccHHHHHHHHHH
Confidence 334444444555566667766654
No 368
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=23.88 E-value=1.9e+02 Score=25.87 Aligned_cols=116 Identities=9% Similarity=-0.068 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccchhHhHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHhHHHHH
Q 022133 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAA 219 (302)
Q Consensus 140 ~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~ 219 (302)
+..+++++-...-+|.=+.-....-.+.|..|.++|+...|+.+.....-.++.-++.-.+..-..-|-..++-....+.
T Consensus 385 sv~ll~agVaaaR~GLW~fDlAVtqimQe~VpEseR~vv~gvqnsL~~~ldll~~ilvIi~pnp~~F~iltliS~~fVs~ 464 (503)
T KOG2601|consen 385 SVYLLFAGVAAARLGLWMFDLAVTQIMQETVPESERCVVFGVQNSLNSALDLLKDILVIIVPNPKDFGILTLISFSFVSL 464 (503)
T ss_pred HHHHHHHHHHHHHhhHHhccHHHHHHHHHhcchhhhhhhHhHHHHHHHHHHHHHHhEEEEecCccceeeeeeehhhHhhh
Q ss_pred HHHHHhhccCCChHHHHHhCCHHHHHHHHHHHhCCCchhH
Q 022133 220 ILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKS 259 (302)
Q Consensus 220 ~~~~~~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (302)
...+..+++..... .++..+.....++...+++.++
T Consensus 465 g~m~y~~~l~q~~~----~~~hl~~~P~~ee~~~~~~~~r 500 (503)
T KOG2601|consen 465 GHMFYTFYLAQIRS----HNFHLEKIPLLEEKEEKEEFER 500 (503)
T ss_pred hhhhhhhhhhhccc----cccchhcCchhhHHHhcCchhh
No 369
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=23.58 E-value=1.6e+02 Score=17.07 Aligned_cols=17 Identities=6% Similarity=-0.041 Sum_probs=8.3
Q ss_pred HHHHHHHHHHhhccCCC
Q 022133 215 IVPAAILCLAMVFCAES 231 (302)
Q Consensus 215 ~~~~~~~~~~~~~~pe~ 231 (302)
.....++++.+.+-|..
T Consensus 18 ~~~~F~gi~~w~~~~~~ 34 (49)
T PF05545_consen 18 FFVFFIGIVIWAYRPRN 34 (49)
T ss_pred HHHHHHHHHHHHHcccc
Confidence 33444455555555543
No 370
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=23.55 E-value=3.8e+02 Score=21.25 Aligned_cols=30 Identities=13% Similarity=-0.048 Sum_probs=19.1
Q ss_pred CccchhHhHHHHHHHHHHHHHHHHhhcccc
Q 022133 173 FVRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (302)
Q Consensus 173 ~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 202 (302)
+.-+++.++...+..+|.++|.++..++..
T Consensus 137 ~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 137 RKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 344556666666667777777777766643
No 371
>PRK14219 camphor resistance protein CrcB; Provisional
Probab=23.31 E-value=3.1e+02 Score=20.12 Aligned_cols=24 Identities=21% Similarity=0.084 Sum_probs=11.9
Q ss_pred HHHHhhhhcchhhhHHHHhhhcCC
Q 022133 148 RFVVGTGMGLGPTVAALYVTEVSP 171 (302)
Q Consensus 148 r~~~g~~~~~~~~~~~~~~~e~~p 171 (302)
|.+.+.|.-+.++...++..|.+.
T Consensus 65 ~~~l~tGf~GgfTTFSTf~~E~~~ 88 (132)
T PRK14219 65 ITGIGTGFIGSFTTFSTFSVETIQ 88 (132)
T ss_pred HHHHHHHHccchhhHHHHHHHHHH
Confidence 333344444445555566666553
No 372
>PRK14220 camphor resistance protein CrcB; Provisional
Probab=22.77 E-value=3e+02 Score=19.81 Aligned_cols=24 Identities=29% Similarity=0.232 Sum_probs=12.8
Q ss_pred HHHHhhhhcchhhhHHHHhhhcCC
Q 022133 148 RFVVGTGMGLGPTVAALYVTEVSP 171 (302)
Q Consensus 148 r~~~g~~~~~~~~~~~~~~~e~~p 171 (302)
|.+.+.|.-+.++...++..|...
T Consensus 62 ~~~l~tGf~GgfTTFSTf~~e~~~ 85 (120)
T PRK14220 62 YALLGTGVLGGYTTFSTLNTELVS 85 (120)
T ss_pred HHHHHHHHccccccHHHHHHHHHH
Confidence 344444444555566666666543
No 373
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=22.71 E-value=6.7e+02 Score=23.88 Aligned_cols=29 Identities=17% Similarity=0.299 Sum_probs=14.4
Q ss_pred hHHHHHHhHHHHHHHHHHhhccCCChHHHH
Q 022133 207 WRICFWVSIVPAAILCLAMVFCAESPHWLY 236 (302)
Q Consensus 207 w~~~~~~~~~~~~~~~~~~~~~pe~~~~~~ 236 (302)
||..-.+.++.+. .++..++.|.++....
T Consensus 130 ~R~~ei~iGi~~a-~~v~~l~~P~~~~~~l 158 (650)
T PF04632_consen 130 WRVLEILIGILCA-TLVSMLFFPQRARRQL 158 (650)
T ss_pred HHHHHHHHHHHHH-HHHHHHhCCccHHHHH
Confidence 5555444333322 3445566787765443
No 374
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=22.46 E-value=3.6e+02 Score=20.69 Aligned_cols=25 Identities=12% Similarity=0.130 Sum_probs=13.7
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHHHH
Q 022133 101 AFIGSTLSGWIADGVGRRRAFQLCA 125 (302)
Q Consensus 101 ~~i~~~~~g~l~d~~Grr~~~~~~~ 125 (302)
..+.-++.|++.-|++.++....+.
T Consensus 126 ~~~~L~ilG~~~a~~s~~~~~~s~l 150 (169)
T TIGR00267 126 TLIALLVLGVYLGRISRENILISSL 150 (169)
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 3355556666666666555544333
No 375
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=22.34 E-value=5e+02 Score=22.21 Aligned_cols=72 Identities=21% Similarity=0.213 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHHhhhhh---hhHHHHHHHHHHHHHH
Q 022133 54 LVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG---VGRRRAFQLCALPMII 130 (302)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~---~Grr~~~~~~~~~~~i 130 (302)
+.+.++.++.-+..+.....+..+.+..+.-.+.. ++..+ .++..++..-.++ ||.||.=+.+.+..++
T Consensus 28 ~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~--al~la------l~A~~~a~r~~~~~~TfGy~R~eiLaa~~nav 99 (296)
T COG1230 28 LLLNLAFMLIEIIGGLLTGSLALLADALHMLSDAL--ALLLA------LIAIKLARRPATKRFTFGYKRLEILAAFLNAL 99 (296)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHH--HHHHH------HHHHHHhcCCCCCCCCccHhHHHHHHHHHHHH
Confidence 33344444433334444444555555555433322 22222 2223333333443 7777766666555554
Q ss_pred HHH
Q 022133 131 GAS 133 (302)
Q Consensus 131 ~~~ 133 (302)
..+
T Consensus 100 ~Li 102 (296)
T COG1230 100 LLI 102 (296)
T ss_pred HHH
Confidence 443
No 376
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=22.28 E-value=5.3e+02 Score=27.27 Aligned_cols=35 Identities=14% Similarity=0.248 Sum_probs=23.4
Q ss_pred hHHHHHHHHHHHHHHHHhhccccc---CcchHHHHHHh
Q 022133 180 AFIQIATCLGLMGSLLIGIPVKEI---AGWWRICFWVS 214 (302)
Q Consensus 180 ~~~~~~~~~g~~~~~~~~~~~~~~---~g~w~~~~~~~ 214 (302)
...+...+++.++-.+.+|++... ..||+|.+|+.
T Consensus 600 ~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yin 637 (1391)
T KOG0065|consen 600 SIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYIN 637 (1391)
T ss_pred HHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHC
Confidence 445556666666667777777654 34689998875
No 377
>PRK14205 camphor resistance protein CrcB; Provisional
Probab=22.01 E-value=3.1e+02 Score=19.66 Aligned_cols=25 Identities=20% Similarity=0.194 Sum_probs=13.1
Q ss_pred HHHHhhhhcchhhhHHHHhhhcCCC
Q 022133 148 RFVVGTGMGLGPTVAALYVTEVSPP 172 (302)
Q Consensus 148 r~~~g~~~~~~~~~~~~~~~e~~p~ 172 (302)
|.+.+.|.-+.++...++..|....
T Consensus 61 ~~~l~tGf~GgfTTFSTf~~e~~~l 85 (118)
T PRK14205 61 QLLLGTGFMGAFTTFSTFKLESVQL 85 (118)
T ss_pred HHHHHhhhccccccHHHHHHHHHHH
Confidence 3334444444455666666666543
No 378
>KOG2887 consensus Membrane protein involved in ER to Golgi transport [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.77 E-value=3.9e+02 Score=20.73 Aligned_cols=56 Identities=18% Similarity=0.053 Sum_probs=27.1
Q ss_pred hhHHHHH-HHHHHHHHHHHHHHhh-cchhHHHHHHHHHHhhhhcchhhhHHHHhhhcCCCCccch
Q 022133 115 VGRRRAF-QLCALPMIIGASISAT-TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGT 177 (302)
Q Consensus 115 ~Grr~~~-~~~~~~~~i~~~~~~~-~~~~~~~~~~r~~~g~~~~~~~~~~~~~~~e~~p~~~R~~ 177 (302)
+.+++.. -...+...+..+..++ -+|...-+++.+++.++. .-|.-..+|-..+|.
T Consensus 106 ~~p~Rl~~T~~~l~~~~~Tly~al~~ks~iLtllf~ilq~lal-------iwYslSyiP~g~~gv 163 (175)
T KOG2887|consen 106 FSPERLPATLSYLATMVLTLYVALWLKSKILTLLFCILQVLAL-------IWYSLSYIPFGRSGV 163 (175)
T ss_pred cChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHhCcchhhHH
Confidence 4444443 3334444444444443 456555556666666532 123334566665554
No 379
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=21.62 E-value=2.4e+02 Score=26.31 Aligned_cols=23 Identities=9% Similarity=0.167 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhh
Q 022133 92 LVVSMCLGGAFIGSTLSGWIADG 114 (302)
Q Consensus 92 ~~~~~~~~~~~i~~~~~g~l~d~ 114 (302)
.+.++..+.++++++++|+.+-|
T Consensus 297 ~l~t~~i~~y~~~~~iaGy~S~~ 319 (521)
T PF02990_consen 297 SLLTAAIILYALTSFIAGYVSAR 319 (521)
T ss_pred hHHHHHHHHHHHHhhHHHHHHHH
Confidence 44444444455555555555544
No 380
>PRK14215 camphor resistance protein CrcB; Provisional
Probab=21.46 E-value=3.3e+02 Score=19.78 Aligned_cols=22 Identities=23% Similarity=0.108 Sum_probs=11.7
Q ss_pred HHhhhhcchhhhHHHHhhhcCC
Q 022133 150 VVGTGMGLGPTVAALYVTEVSP 171 (302)
Q Consensus 150 ~~g~~~~~~~~~~~~~~~e~~p 171 (302)
+.+.|.-+.++...++..|...
T Consensus 68 ~l~tGf~GgfTTFSTf~~E~~~ 89 (126)
T PRK14215 68 MLVTGLLGGFTTFSTFGYESYS 89 (126)
T ss_pred HHHhHHhcccccHHHHHHHHHH
Confidence 3444444445556666666653
No 381
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=21.36 E-value=1.1e+03 Score=25.66 Aligned_cols=19 Identities=16% Similarity=0.179 Sum_probs=9.6
Q ss_pred hHHHHHHhHHHHHHHHHHh
Q 022133 207 WRICFWVSIVPAAILCLAM 225 (302)
Q Consensus 207 w~~~~~~~~~~~~~~~~~~ 225 (302)
|+..+++.+++.++.++..
T Consensus 197 w~Lalv~l~~~pl~~~~~~ 215 (1466)
T PTZ00265 197 ARLTLCITCVFPLIYICGV 215 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 7777655444433333333
No 382
>PRK14199 camphor resistance protein CrcB; Provisional
Probab=21.07 E-value=3.4e+02 Score=19.79 Aligned_cols=20 Identities=25% Similarity=0.169 Sum_probs=10.2
Q ss_pred hhhhcchhhhHHHHhhhcCC
Q 022133 152 GTGMGLGPTVAALYVTEVSP 171 (302)
Q Consensus 152 g~~~~~~~~~~~~~~~e~~p 171 (302)
+.|.-+.++...++..|...
T Consensus 73 ~tGf~GgfTTFSTf~~E~~~ 92 (128)
T PRK14199 73 TTGIMGGLTTFSTFSYETIN 92 (128)
T ss_pred HhHHhcccccHHHHHHHHHH
Confidence 33333444555566666553
No 383
>PHA03231 glycoprotein BALF4; Provisional
Probab=20.56 E-value=1.4e+02 Score=29.40 Aligned_cols=19 Identities=0% Similarity=-0.018 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHhhccc
Q 022133 183 QIATCLGLMGSLLIGIPVK 201 (302)
Q Consensus 183 ~~~~~~g~~~~~~~~~~~~ 201 (302)
+...+++++++.++.|++.
T Consensus 680 ~vv~~v~ga~~SiVsG~~s 698 (829)
T PHA03231 680 NVVSGVAGAVGSIVSGVIS 698 (829)
T ss_pred hhhhhHHHHHHHHHHHHHH
Confidence 3444555555555555543
No 384
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=20.29 E-value=3e+02 Score=24.16 Aligned_cols=67 Identities=16% Similarity=0.178 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH-HHhhc---chhHHHHHHHHHHhhhhc
Q 022133 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS-ISATT---RNLIGMLLGRFVVGTGMG 156 (302)
Q Consensus 90 ~~~~~~~~~~~~~i~~~~~g~l~d~~Grr~~~~~~~~~~~i~~~-~~~~~---~~~~~~~~~r~~~g~~~~ 156 (302)
+|....++.++.++.+.+.|.++.++||-+.+..+.+....-.. .+... .+.+.+.+.-.+.|++-+
T Consensus 312 igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv~l~li~~~~~w~~~~~~~~i~y~~aalwgv~d~ 382 (390)
T KOG3097|consen 312 IGFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVVHLLLITILFFWAPNPQDSWIFYVAAALWGVGDA 382 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHhcccCCCCceEEEeehhhcCccHH
Confidence 47788888999899999999999999998888777665433222 22221 233444455555555543
No 385
>PRK14195 camphor resistance protein CrcB; Provisional
Probab=20.08 E-value=3.5e+02 Score=19.57 Aligned_cols=24 Identities=17% Similarity=0.152 Sum_probs=12.7
Q ss_pred HHHHhhhhcchhhhHHHHhhhcCC
Q 022133 148 RFVVGTGMGLGPTVAALYVTEVSP 171 (302)
Q Consensus 148 r~~~g~~~~~~~~~~~~~~~e~~p 171 (302)
|.+.+.|.-+.++...++..|...
T Consensus 66 ~~~l~tGf~GgfTTFSTf~~e~~~ 89 (125)
T PRK14195 66 RLFLIVGVLGGFTTFSAFSLDAAL 89 (125)
T ss_pred HHHHHhHhccCcccHHHHHHHHHH
Confidence 333444444445566666666654
Done!