Query 022137
Match_columns 302
No_of_seqs 116 out of 1246
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 08:19:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022137.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022137hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02693 IAA-amino acid hydrol 100.0 1.2E-50 2.6E-55 381.1 36.0 276 24-301 31-308 (437)
2 PLN02280 IAA-amino acid hydrol 100.0 1.8E-49 3.9E-54 375.6 34.4 269 33-301 92-360 (478)
3 TIGR01891 amidohydrolases amid 100.0 9E-47 1.9E-51 348.4 31.4 261 41-301 2-264 (363)
4 COG1473 AbgB Metal-dependent a 100.0 6.6E-46 1.4E-50 339.9 32.0 272 29-301 4-278 (392)
5 PRK06915 acetylornithine deace 100.0 2.6E-45 5.6E-50 345.2 32.8 268 24-301 3-308 (422)
6 PRK08588 succinyl-diaminopimel 100.0 5.1E-45 1.1E-49 338.4 30.1 255 38-301 2-270 (377)
7 PRK13013 succinyl-diaminopimel 100.0 2E-43 4.3E-48 332.9 31.6 266 27-301 3-315 (427)
8 PRK06837 acetylornithine deace 100.0 4.1E-43 8.8E-48 330.6 32.9 269 23-301 5-313 (427)
9 PRK13004 peptidase; Reviewed 100.0 6.3E-43 1.4E-47 326.7 32.3 265 26-300 3-279 (399)
10 TIGR03526 selenium_YgeY putati 100.0 6E-43 1.3E-47 326.4 31.9 265 27-301 2-278 (395)
11 TIGR03320 ygeY M20/DapE family 100.0 9.8E-43 2.1E-47 325.0 31.4 265 27-301 2-278 (395)
12 PRK06133 glutamate carboxypept 100.0 2.7E-42 5.8E-47 323.3 32.6 264 25-301 24-301 (410)
13 PRK07338 hypothetical protein; 100.0 7.2E-42 1.6E-46 319.9 32.0 263 25-301 4-294 (402)
14 PRK08596 acetylornithine deace 100.0 8.9E-42 1.9E-46 320.9 31.8 263 28-301 3-299 (421)
15 TIGR01910 DapE-ArgE acetylorni 100.0 1.6E-42 3.4E-47 321.5 26.1 253 42-301 2-279 (375)
16 TIGR01892 AcOrn-deacetyl acety 100.0 6E-42 1.3E-46 316.2 28.6 248 42-301 1-269 (364)
17 PRK07522 acetylornithine deace 100.0 5.6E-42 1.2E-46 318.8 28.4 253 38-301 4-279 (385)
18 PRK13009 succinyl-diaminopimel 100.0 1.3E-41 2.9E-46 315.2 30.5 259 39-301 3-276 (375)
19 PRK13983 diaminopimelate amino 100.0 8.6E-42 1.9E-46 319.0 29.0 262 35-301 2-297 (400)
20 PRK05111 acetylornithine deace 100.0 1.3E-41 2.8E-46 316.2 29.6 251 38-301 5-282 (383)
21 TIGR01246 dapE_proteo succinyl 100.0 1.4E-41 2.9E-46 314.7 28.3 257 41-301 2-273 (370)
22 TIGR01900 dapE-gram_pos succin 100.0 1.3E-41 2.9E-46 314.8 27.8 249 43-299 1-276 (373)
23 PRK08201 hypothetical protein; 100.0 2.4E-41 5.2E-46 321.1 29.4 272 26-301 2-348 (456)
24 TIGR01880 Ac-peptdase-euk N-ac 100.0 3.9E-41 8.5E-46 314.7 29.7 261 37-301 8-294 (400)
25 PRK09133 hypothetical protein; 100.0 6.1E-41 1.3E-45 319.6 29.0 260 36-301 35-365 (472)
26 PRK06446 hypothetical protein; 100.0 5.9E-41 1.3E-45 316.6 26.1 260 38-301 2-329 (436)
27 PRK13007 succinyl-diaminopimel 100.0 3E-40 6.6E-45 303.6 29.6 249 36-301 5-264 (352)
28 PRK07907 hypothetical protein; 100.0 4.2E-40 9E-45 312.0 29.4 270 26-301 6-340 (449)
29 PRK07473 carboxypeptidase; Pro 100.0 2.3E-39 5E-44 300.1 30.2 250 37-300 10-274 (376)
30 PRK09104 hypothetical protein; 100.0 1.8E-39 4E-44 308.8 29.7 273 26-301 5-356 (464)
31 PRK08651 succinyl-diaminopimel 100.0 2.1E-39 4.5E-44 302.5 28.4 256 34-301 2-287 (394)
32 PRK00466 acetyl-lysine deacety 100.0 4.3E-39 9.3E-44 295.4 28.1 237 36-301 8-248 (346)
33 PRK08737 acetylornithine deace 100.0 3.9E-39 8.6E-44 297.1 27.9 241 37-301 5-266 (364)
34 PRK07906 hypothetical protein; 100.0 2.4E-39 5.2E-44 305.0 26.4 257 41-300 2-321 (426)
35 PRK08652 acetylornithine deace 100.0 3.4E-39 7.4E-44 296.0 26.4 241 38-301 2-248 (347)
36 PRK04443 acetyl-lysine deacety 100.0 6E-39 1.3E-43 294.7 28.0 241 37-300 5-252 (348)
37 PRK08262 hypothetical protein; 100.0 6.7E-40 1.4E-44 313.5 22.0 265 32-301 38-378 (486)
38 PRK07079 hypothetical protein; 100.0 1.5E-37 3.2E-42 296.0 28.8 269 26-301 7-351 (469)
39 TIGR01883 PepT-like peptidase 100.0 1.6E-37 3.4E-42 286.6 26.1 245 40-301 2-262 (361)
40 TIGR01886 dipeptidase dipeptid 100.0 7.2E-37 1.6E-41 290.6 28.4 262 29-301 4-368 (466)
41 PRK07205 hypothetical protein; 100.0 1.1E-36 2.4E-41 288.2 28.9 260 35-301 8-345 (444)
42 COG0624 ArgE Acetylornithine d 100.0 2.9E-36 6.3E-41 282.6 29.3 266 30-301 5-303 (409)
43 PRK07318 dipeptidase PepV; Rev 100.0 3.4E-36 7.4E-41 286.4 28.2 264 28-301 4-368 (466)
44 KOG2275 Aminoacylase ACY1 and 100.0 5.9E-36 1.3E-40 267.2 25.6 260 38-301 25-312 (420)
45 TIGR01902 dapE-lys-deAc N-acet 100.0 7.1E-36 1.5E-40 273.1 26.3 232 42-298 1-236 (336)
46 PRK13381 peptidase T; Provisio 100.0 1.1E-35 2.3E-40 278.4 26.5 246 40-301 3-298 (404)
47 PRK12892 allantoate amidohydro 100.0 1.4E-34 2.9E-39 271.6 27.7 245 37-301 9-309 (412)
48 PRK12893 allantoate amidohydro 100.0 2E-34 4.2E-39 270.5 28.3 245 37-301 9-308 (412)
49 TIGR01882 peptidase-T peptidas 100.0 4.3E-35 9.4E-40 274.5 23.2 249 38-301 3-302 (410)
50 PRK05469 peptidase T; Provisio 100.0 1.2E-34 2.7E-39 271.5 26.1 249 38-301 2-300 (408)
51 PRK15026 aminoacyl-histidine d 100.0 7.5E-34 1.6E-38 269.9 28.0 245 37-301 9-288 (485)
52 PRK06156 hypothetical protein; 100.0 1.1E-33 2.5E-38 271.9 29.4 257 34-301 42-413 (520)
53 PRK09290 allantoate amidohydro 100.0 9.4E-34 2E-38 265.9 27.6 244 37-301 6-309 (413)
54 TIGR01887 dipeptidaselike dipe 100.0 3.1E-33 6.8E-38 264.0 28.6 251 38-299 2-353 (447)
55 PRK12891 allantoate amidohydro 100.0 3.6E-33 7.9E-38 261.9 28.5 243 39-301 11-308 (414)
56 PRK12890 allantoate amidohydro 100.0 4E-33 8.8E-38 261.7 28.4 233 49-301 29-310 (414)
57 TIGR01893 aa-his-dipept aminoa 100.0 2.5E-32 5.5E-37 260.5 27.8 247 37-300 3-281 (477)
58 TIGR01879 hydantase amidase, h 100.0 1.7E-31 3.7E-36 249.7 28.7 230 52-301 25-301 (401)
59 TIGR03176 AllC allantoate amid 100.0 5E-30 1.1E-34 239.7 28.8 244 38-301 3-302 (406)
60 PRK13799 unknown domain/N-carb 100.0 7.2E-30 1.6E-34 248.2 28.2 247 36-301 179-487 (591)
61 PRK13590 putative bifunctional 100.0 1.5E-29 3.4E-34 246.1 27.3 244 37-301 180-485 (591)
62 PRK08554 peptidase; Reviewed 100.0 6.6E-29 1.4E-33 234.2 25.3 250 39-301 2-337 (438)
63 KOG2276 Metalloexopeptidases [ 100.0 4E-28 8.6E-33 215.3 22.3 271 26-301 4-362 (473)
64 COG4187 RocB Arginine degradat 99.8 3.2E-20 6.9E-25 166.7 16.5 259 37-299 7-321 (553)
65 PF07687 M20_dimer: Peptidase 99.8 1.8E-18 4E-23 132.5 12.1 99 203-301 2-105 (111)
66 PRK10199 alkaline phosphatase 99.7 1.2E-16 2.5E-21 143.9 16.6 132 38-174 35-189 (346)
67 COG2195 PepD Di- and tripeptid 99.6 2.3E-14 4.9E-19 132.2 11.1 251 37-301 4-307 (414)
68 TIGR03106 trio_M42_hydro hydro 99.5 1.5E-13 3.3E-18 125.2 14.8 130 38-168 3-224 (343)
69 PF01546 Peptidase_M20: Peptid 99.5 2.5E-14 5.5E-19 119.6 7.8 76 97-174 1-85 (189)
70 PRK09961 exoaminopeptidase; Pr 99.4 3.8E-12 8.3E-17 116.3 16.7 142 41-188 3-223 (344)
71 COG1363 FrvX Cellulase M and r 99.4 5.2E-12 1.1E-16 114.2 15.4 144 38-187 2-236 (355)
72 TIGR03107 glu_aminopep glutamy 99.4 1.8E-11 3.8E-16 111.8 16.1 142 42-189 2-236 (350)
73 PRK09864 putative peptidase; P 99.3 4.7E-11 1E-15 108.9 16.2 139 41-188 3-230 (356)
74 KOG2194 Aminopeptidases of the 98.7 1.3E-07 2.8E-12 93.0 11.9 134 38-186 57-224 (834)
75 PF04389 Peptidase_M28: Peptid 98.4 8.8E-07 1.9E-11 73.5 7.3 80 95-185 2-87 (179)
76 PF05343 Peptidase_M42: M42 gl 98.0 4.1E-05 8.9E-10 68.6 9.3 60 123-187 128-190 (292)
77 KOG3946 Glutaminyl cyclase [Po 97.3 0.0036 7.7E-08 54.6 11.3 126 37-173 50-200 (338)
78 KOG2526 Predicted aminopeptida 97.3 0.0036 7.9E-08 57.5 11.8 114 62-186 165-304 (555)
79 COG2234 Iap Predicted aminopep 97.1 0.0018 3.9E-08 61.4 8.5 44 130-175 231-275 (435)
80 KOG2195 Transferrin receptor a 96.7 0.0053 1.1E-07 61.0 7.9 79 80-174 337-421 (702)
81 PF05450 Nicastrin: Nicastrin; 95.6 0.052 1.1E-06 47.0 7.5 68 94-172 1-73 (234)
82 cd00433 Peptidase_M17 Cytosol 94.9 0.89 1.9E-05 43.6 14.1 120 37-162 153-295 (468)
83 PRK00913 multifunctional amino 94.8 1.4 3.1E-05 42.2 15.0 120 37-162 170-309 (483)
84 PTZ00412 leucyl aminopeptidase 94.4 1.1 2.3E-05 43.4 13.2 119 38-162 212-354 (569)
85 PRK05015 aminopeptidase B; Pro 94.1 1.9 4.1E-05 40.4 13.8 120 38-162 100-246 (424)
86 PF00883 Peptidase_M17: Cytoso 93.5 0.24 5.2E-06 44.6 6.7 110 41-162 1-140 (311)
87 KOG2597 Predicted aminopeptida 93.0 1.4 3.1E-05 42.1 11.2 122 37-162 188-330 (513)
88 TIGR01893 aa-his-dipept aminoa 89.1 0.85 1.8E-05 43.8 5.9 43 253-301 336-378 (477)
89 COG0260 PepB Leucyl aminopepti 89.0 11 0.00024 36.2 13.2 118 37-162 166-308 (485)
90 COG4882 Predicted aminopeptida 82.8 3 6.6E-05 38.1 5.6 73 81-174 178-260 (486)
91 PRK02256 putative aminopeptida 66.1 12 0.00026 35.9 5.3 43 120-166 251-296 (462)
92 PF09940 DUF2172: Domain of un 59.0 40 0.00087 31.3 7.0 70 81-172 115-186 (386)
93 PRK15026 aminoacyl-histidine d 56.7 26 0.00057 33.8 5.9 41 255-301 344-384 (485)
94 PF04114 Gaa1: Gaa1-like, GPI 52.9 2.1E+02 0.0045 27.9 11.3 74 80-174 2-78 (504)
95 PRK02813 putative aminopeptida 41.0 35 0.00075 32.5 3.9 30 42-75 10-39 (428)
96 COG4635 HemG Flavodoxin [Energ 40.4 16 0.00035 29.6 1.4 32 47-78 4-35 (175)
97 TIGR01887 dipeptidaselike dipe 35.8 99 0.0022 29.5 6.2 28 256-283 190-217 (447)
98 PRK02813 putative aminopeptida 35.1 2.5E+02 0.0055 26.7 8.7 35 130-169 237-275 (428)
99 PRK06156 hypothetical protein; 33.9 83 0.0018 30.6 5.4 26 255-280 239-264 (520)
100 PRK02256 putative aminopeptida 32.6 2.2E+02 0.0047 27.4 7.8 60 42-105 30-105 (462)
101 KOG3566 Glycosylphosphatidylin 31.2 5.4E+02 0.012 25.6 12.8 91 61-173 91-193 (617)
102 PF06675 DUF1177: Protein of u 31.1 1.8E+02 0.004 25.4 6.3 85 92-186 30-129 (276)
103 PRK13562 acetolactate synthase 30.6 1.1E+02 0.0024 21.9 4.2 45 255-301 26-70 (84)
104 COG3756 Uncharacterized protei 27.5 1.4E+02 0.003 23.7 4.5 62 6-67 25-88 (153)
105 PF05418 Apo-VLDL-II: Apovitel 27.3 2E+02 0.0044 19.9 4.8 34 22-55 15-48 (82)
106 PTZ00371 aspartyl aminopeptida 26.0 1E+02 0.0023 29.6 4.5 29 43-75 12-40 (465)
107 PF14133 DUF4300: Domain of un 25.8 3.7E+02 0.0079 23.6 7.4 64 41-106 129-193 (250)
108 PF01221 Dynein_light: Dynein 25.3 1.6E+02 0.0035 21.0 4.4 16 56-71 34-49 (89)
109 PTZ00371 aspartyl aminopeptida 24.0 3.3E+02 0.0071 26.3 7.4 34 72-105 52-90 (465)
110 COG1362 LAP4 Aspartyl aminopep 23.7 4.2E+02 0.009 25.2 7.7 49 57-105 23-90 (437)
111 PRK11152 ilvM acetolactate syn 23.6 2.2E+02 0.0047 19.9 4.6 43 255-301 27-69 (76)
112 COG1979 Uncharacterized oxidor 23.3 2.5E+02 0.0055 25.8 6.0 46 33-78 294-341 (384)
113 COG2195 PepD Di- and tripeptid 22.6 52 0.0011 31.1 1.7 68 94-168 62-139 (414)
114 cd06411 PB1_p51 The PB1 domain 22.3 1.8E+02 0.0039 20.5 3.9 28 274-301 4-31 (78)
115 PRK06737 acetolactate synthase 21.5 2.9E+02 0.0062 19.3 4.9 43 256-301 27-69 (76)
No 1
>PLN02693 IAA-amino acid hydrolase
Probab=100.00 E-value=1.2e-50 Score=381.11 Aligned_cols=276 Identities=56% Similarity=0.910 Sum_probs=243.2
Q ss_pred HhHHHHHHHHHh--hHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCCCCcEEEEEEe
Q 022137 24 ILTNQVMISAQQ--DKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRAD 101 (302)
Q Consensus 24 ~~~~~~~~~~~~--~~~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~i~l~~H 101 (302)
..+..+.+..++ ..+++++++++|+++|++|++|.++++||.++|+++|++++....++|+++.++++++|+|+|.||
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~r~~lh~~PE~s~~E~~ta~~i~~~L~~~G~~~~~~~~~~~via~~g~~~g~~i~l~~h 110 (437)
T PLN02693 31 QIQINLLELAKSPEVFDWMVRIRRKIHENPELGYEEFETSKLIRSELDLIGIKYRYPVAITGIIGYIGTGEPPFVALRAD 110 (437)
T ss_pred hhHHHHHHHhhhhhhHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHCCCeeEecCCCcEEEEEECCCCCCEEEEEee
Confidence 333344444443 557899999999999999999999999999999999999876557899999996555689999999
Q ss_pred cccCCCCCCCCCccccccCCceecCCCcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCCccCcHHHHHHcCCCCCCce
Q 022137 102 MDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEA 181 (302)
Q Consensus 102 ~DtVp~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~G~~~~~~~~~~~~~d~ 181 (302)
|||||..+...|++++..+|++||||||++++++|+|+++|++.+..++++|.|+|+++||++.|++.+++++.+++.|+
T Consensus 111 ~DaVp~~e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE~~~Ga~~~i~~g~~~~~~~ 190 (437)
T PLN02693 111 MDALPIQEAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEA 190 (437)
T ss_pred cCCCcCCCCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEcccchhhHHHHHHCCCCCCCCE
Confidence 99999988778999998899999999999999999999999988767789999999999997789999999988777889
Q ss_pred EEEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEE
Q 022137 182 IFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTY 261 (302)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 261 (302)
++++|.++..+.|.+..+.|..++|..+++|+++|+++|++.|+.|+|||..+++++.+|+++..+..++....++|++.
T Consensus 191 iig~h~~p~~~~g~~~~~~g~~~~G~~~~~i~v~Gk~aHaa~P~~G~nAI~~aa~~i~~l~~~~~~~~~~~~~~ti~vg~ 270 (437)
T PLN02693 191 IFGIHLSPRTPFGKAASRAGSFMAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSK 270 (437)
T ss_pred EEEEecCCCCCCeeEEeccCcccccceEEEEEEEcccccCCCCCCCcCHHHHHHHHHHHHHHHhcccCCCCCCcEEEEEE
Confidence 99999887767787766777778899999999999999999999999999999999999999865555566778999999
Q ss_pred EecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 262 VRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 262 i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
|+||.+.|+||++|++.+|+|+.+.. +.+.++|+++++
T Consensus 271 i~GG~~~NvVPd~a~~~~diR~~~~~--~~i~~~i~~i~~ 308 (437)
T PLN02693 271 VNGGNAFNVIPDSITIGGTLRAFTGF--TQLQQRIKEIIT 308 (437)
T ss_pred EEcCCCCceECCeEEEEEEEecCCHH--HHHHHHHHHHHH
Confidence 99999999999999999999999874 578888888765
No 2
>PLN02280 IAA-amino acid hydrolase
Probab=100.00 E-value=1.8e-49 Score=375.65 Aligned_cols=269 Identities=55% Similarity=0.897 Sum_probs=243.4
Q ss_pred HHhhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCCCCcEEEEEEecccCCCCCCCC
Q 022137 33 AQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVE 112 (302)
Q Consensus 33 ~~~~~~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~ 112 (302)
.++..+.+.++.++++++|+++++|.++++||.++|+++|+++++...+.|++++++++++|+|+|.|||||||..+...
T Consensus 92 ~~~~~~~l~~l~r~lh~~PEls~~E~~t~~~i~~~L~~~G~~~~~~~~~~~vva~~g~~~~~~I~l~gh~DaVP~~e~~~ 171 (478)
T PLN02280 92 QPDTVAWLKSVRRKIHENPELAFEEYKTSELVRSELDRMGIMYRYPLAKTGIRAWIGTGGPPFVAVRADMDALPIQEAVE 171 (478)
T ss_pred hHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCeEEecCCCCEEEEEECCCCCCEEEEEEecCCCcccCCCC
Confidence 34455778889999999999999999999999999999999988766789999999544458999999999999987778
Q ss_pred CccccccCCceecCCCcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCCccCcHHHHHHcCCCCCCceEEEeeccCCCC
Q 022137 113 WEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIP 192 (302)
Q Consensus 113 w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~G~~~~~~~~~~~~~d~~~~~~~~~~~~ 192 (302)
|+++++++|++||||||++++++|+++++|++.+..++++|.|+|++|||.+.|++++++++.++++|+++++|+.+.+|
T Consensus 172 w~~~p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pdEE~g~Ga~~li~~g~~~~~d~~~~~h~~~~~p 251 (478)
T PLN02280 172 WEHKSKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPAEEAGNGAKRMIGDGALDDVEAIFAVHVSHEHP 251 (478)
T ss_pred CCCCCCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEecccccccchHHHHHHCCCCcCCCEEEEEecCCCCC
Confidence 99999999999999999999999999999998777789999999999999767999999999888889999999876678
Q ss_pred CcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEEEecCCcCcccC
Q 022137 193 TGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIP 272 (302)
Q Consensus 193 ~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~gg~~~n~iP 272 (302)
++.+..+++...+|..+++|+++|+++|++.|+.|+||++.+++++..++++..+..++....++|++.|+||.+.|+||
T Consensus 252 ~g~ig~~~~~~~~G~~~~~I~v~Gk~aHas~P~~G~NAI~~aa~li~~l~~l~~r~~~~~~~~tvnvg~I~GG~~~NvIP 331 (478)
T PLN02280 252 TAVIGSRPGPLLAGCGFFRAVISGKKGRAGSPHHSVDLILAASAAVISLQGIVSREANPLDSQVVSVTTMDGGNNLDMIP 331 (478)
T ss_pred CceeEecccccccceeEEEEEEECcchhcCCcccCcCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEEEccCCCCEeC
Confidence 88777777778889999999999999999999999999999999999999886554455566899999999999999999
Q ss_pred CeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 273 PFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 273 ~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
++|++.+|+|+.+.++.+++.++|+++++
T Consensus 332 d~~~l~~diR~~~~e~~e~l~~~I~~~~~ 360 (478)
T PLN02280 332 DTVVLGGTFRAFSNTSFYQLLKRIQEVIV 360 (478)
T ss_pred CEEEEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998875
No 3
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=100.00 E-value=9e-47 Score=348.43 Aligned_cols=261 Identities=47% Similarity=0.755 Sum_probs=228.2
Q ss_pred HHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeee-ccCCceEEEEecCC-CCcEEEEEEecccCCCCCCCCCccccc
Q 022137 41 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAY-PVAKTGIVAQIGSG-SRPVVVLRADMDALPLQELVEWEHKSK 118 (302)
Q Consensus 41 ~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~-~~~~~nvia~~~~~-~~~~i~l~~H~DtVp~~~~~~w~~~~~ 118 (302)
.+++++|++|||++++|.++++||.++|+++|++++. .....|+++.++++ ++|+|+|.||+||||.+++..+||...
T Consensus 2 ~~~~~~L~~ips~s~~E~~~a~~l~~~l~~~g~~~~~~~~~~~~vva~~~~~~~~~~i~l~gH~DtVp~~~~~~~pf~~~ 81 (363)
T TIGR01891 2 TDIRRHLHEHPELSFEEFKTSSLIAEALESLGIEVRRGVGGATGVVATIGGGKPGPVVALRADMDALPIQEQTDLPYKST 81 (363)
T ss_pred hHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEecCCCCcEEEEEEeCCCCCCEEEEEeccCCCCcccccCCCcccC
Confidence 5789999999999999999999999999999999876 45678999999764 458999999999999876656788766
Q ss_pred cCCceecCCCcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCCccCcHHHHHHcCCCCCCceEEEeeccCCCCCcceee
Q 022137 119 IDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIAS 198 (302)
Q Consensus 119 ~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 198 (302)
+||++||||+|++++++++++..|++.+..++++|.|+|++|||.+.|++++++++.++++|++++.++.+..+.+.+..
T Consensus 82 ~~g~l~g~G~~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~G~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~~~ 161 (363)
T TIGR01891 82 NPGVMHACGHDLHTAILLGTAKLLKKLADLLEGTVRLIFQPAEEGGGGATKMIEDGVLDDVDAILGLHPDPSIPAGTVGL 161 (363)
T ss_pred CCCceecCcCHHHHHHHHHHHHHHHhchhhCCceEEEEEeecCcCcchHHHHHHCCCCCCcCEEEEECCCCCCCCeEEEE
Confidence 78999999999999999999999988766788999999999999768999999888777788888887765556666545
Q ss_pred ecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEEEecCCcCcccCCeEEEE
Q 022137 199 ISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFG 278 (302)
Q Consensus 199 ~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~gg~~~n~iP~~~~~~ 278 (302)
..+.+++|..+++|+++|+++|++.|+.|.||+..+++++++++++...........++|++.|+||.+.|+||++|++.
T Consensus 162 ~~~~~~~g~~~~~i~~~G~~~Has~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~nvvP~~~~~~ 241 (363)
T TIGR01891 162 RPGTIMAAADKFEVTIHGKGAHAARPHLGRDALDAAAQLVVALQQIVSRNVDPSRPAVVTVGIIEAGGAPNVIPDKASMS 241 (363)
T ss_pred CCCcceeecceEEEEEEeecccccCcccccCHHHHHHHHHHHHHHHhhccCCCCCCcEEEEEEEEcCCCCcEECCeeEEE
Confidence 56677889999999999999999999999999999999999998864332233345789999999999999999999999
Q ss_pred EEEecCChhhHHHHHHHHHHhhh
Q 022137 279 GTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 279 ~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
+|+|++|.++.+++.+.|+++++
T Consensus 242 ~diR~~~~~~~e~~~~~i~~~~~ 264 (363)
T TIGR01891 242 GTVRSLDPEVRDQIIDRIERIVE 264 (363)
T ss_pred EEEEeCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999998874
No 4
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=100.00 E-value=6.6e-46 Score=339.91 Aligned_cols=272 Identities=45% Similarity=0.735 Sum_probs=253.1
Q ss_pred HHHHHHhhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeecc-CCceEEEEecCC-CCcEEEEEEecccCC
Q 022137 29 VMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV-AKTGIVAQIGSG-SRPVVVLRADMDALP 106 (302)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~~-~~~nvia~~~~~-~~~~i~l~~H~DtVp 106 (302)
+.+.+ ..+++++++.|+|+++|+.+++|.+++.||.++|+++|+++.... .++++++.++++ ++|+|.|.+.||.+|
T Consensus 4 ~~~~~-~~~~~l~~~rr~lH~~PEL~f~E~~Ta~~i~~~L~~~g~~~~~~~~~~TGvva~~~~g~~g~tIalRAD~DALP 82 (392)
T COG1473 4 ILDEI-ELKDELIEWRRDLHEHPELGFEEYRTAAYIAEKLEELGFEVVEVGGGKTGVVATLKGGKPGPTIALRADMDALP 82 (392)
T ss_pred HHHHH-hhhHHHHHHHHHHhhCCccchhHHHHHHHHHHHHHHcCCeeEeccCCceEEEEEEcCCCCCCEEEEEeecccCc
Confidence 34445 778999999999999999999999999999999999999944443 379999999865 567999999999999
Q ss_pred CCCCCCCccccccCCceecCCCcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCCccCcHHHHHHcCCCCC-CceEEEe
Q 022137 107 LQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGD-SEAIFGM 185 (302)
Q Consensus 107 ~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~G~~~~~~~~~~~~-~d~~~~~ 185 (302)
..++.++||++..+|++|+|||+++.+++|++++.|++...+++++|+|+|+|+||+..|++.|+++|.+++ +|+++++
T Consensus 83 i~E~t~~~~~S~~~G~mHACGHD~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~Ga~~mi~~G~~~~~vD~v~g~ 162 (392)
T COG1473 83 IQEETGLPFASKNPGVMHACGHDGHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGGGAKAMIEDGVFDDFVDAVFGL 162 (392)
T ss_pred cccccCCCcccCCCCCcccCCchHHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccccHHHHHhcCCccccccEEEEe
Confidence 999899999999999999999999999999999999988678999999999999998779999999999888 9999999
Q ss_pred eccCCCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEEEecC
Q 022137 186 HIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGG 265 (302)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~gg 265 (302)
|+.+..|.|.+..+.|....+...++|+++|+++|++.|+.++||+..++.++..|+.+..+..+|....+++++.++||
T Consensus 163 H~~p~~~~g~v~~~~G~~~aa~d~~~i~~~GkggH~a~Ph~~~d~i~aa~~~v~~lq~ivsr~~~p~~~~vv~vg~~~aG 242 (392)
T COG1473 163 HPGPGLPVGTVALRPGALMAAADEFEITFKGKGGHAAAPHLGIDALVAAAQLVTALQTIVSRNVDPLDSAVVTVGKIEAG 242 (392)
T ss_pred cCCCCCCCceEEeecccceeecceEEEEEEeCCcccCCcccccCHHHHHHHHHHHHHHHHhcccCCccCeEEEEEEecCC
Confidence 99877688999889998888999999999999999999999999999999999999999988888888899999999999
Q ss_pred CcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 266 TAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 266 ~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
.+.|+||+++++.+++|....+..+.+.++|+++++
T Consensus 243 ~a~NVIpd~A~l~gtvR~~~~~~~~~~~~~i~~ia~ 278 (392)
T COG1473 243 TAANVIPDSAELEGTIRTFSDEVREKLEARIERIAK 278 (392)
T ss_pred CcCCcCCCeeEEEEEeecCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999886
No 5
>PRK06915 acetylornithine deacetylase; Validated
Probab=100.00 E-value=2.6e-45 Score=345.18 Aligned_cols=268 Identities=20% Similarity=0.289 Sum_probs=229.6
Q ss_pred HhHHHHHHHHHhhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeec--------------------cCCce
Q 022137 24 ILTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYP--------------------VAKTG 83 (302)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~--------------------~~~~n 83 (302)
++.+++.++++++++++++++++|++|||++++|.++++||+++|+++|++++.. +.++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 82 (422)
T PRK06915 3 QLKKQICDYIESHEEEAVKLLKRLIQEKSVSGDESGAQAIVIEKLRELGLDLDIWEPSFKKLKDHPYFVSPRTSFSDSPN 82 (422)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCeeEEeecchhhhhcccccCCcccccCCCce
Confidence 4578899999999999999999999999999999999999999999999997531 24799
Q ss_pred EEEEecCC-CCcEEEEEEecccCCCCCCCCC---cccc-ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEE
Q 022137 84 IVAQIGSG-SRPVVVLRADMDALPLQELVEW---EHKS-KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRI 155 (302)
Q Consensus 84 via~~~~~-~~~~i~l~~H~DtVp~~~~~~w---~~~~-~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~ 155 (302)
+++.+++. ++|+|+|+|||||||.++.+.| ||.+ .+||++|||| |||+++++|.|+++|++.+..++++|.|
T Consensus 83 lia~~~g~~~~~~l~l~~H~Dtvp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~v~~ 162 (422)
T PRK06915 83 IVATLKGSGGGKSMILNGHIDVVPEGDVNQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGDVIF 162 (422)
T ss_pred EEEEEcCCCCCCeEEEEeeccccCCCCcccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEEE
Confidence 99999653 4689999999999999887789 4543 4799999999 4899999999999999888778899999
Q ss_pred EEeecCC-ccCcHHHHHHcCCCCCCceEEEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHH
Q 022137 156 LFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTA 234 (302)
Q Consensus 156 ~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~ 234 (302)
+|+++|| ++.|+..++.++. ..|+++.. +|++. .+..+++|..+++|+++|+++|++.|+.|+||+..+
T Consensus 163 ~~~~dEE~g~~G~~~~~~~~~--~~d~~i~~-----ep~~~---~i~~~~~G~~~~~i~v~G~~~H~s~p~~g~nAi~~~ 232 (422)
T PRK06915 163 QSVIEEESGGAGTLAAILRGY--KADGAIIP-----EPTNM---KFFPKQQGSMWFRLHVKGKAAHGGTRYEGVSAIEKS 232 (422)
T ss_pred EEecccccCCcchHHHHhcCc--CCCEEEEC-----CCCCc---cceeecccEEEEEEEEEeeccccCCCCcCcCHHHHH
Confidence 9999999 6679888888764 46877753 35553 234678999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhc----CCCC-----CCeeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 235 SSVILALQQLISRE----ADPL-----QSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 235 ~~~i~~l~~~~~~~----~~~~-----~~~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
++++..++++.... ..+. .+.++|++.|+||.+.|+||++|++.+|+|+.|.++.+++.++|++.++
T Consensus 233 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~a~~~~d~R~~p~~~~~~v~~~i~~~l~ 308 (422)
T PRK06915 233 MFVIDHLRKLEEKRNDRITDPLYKGIPIPIPINIGKIEGGSWPSSVPDSVILEGRCGIAPNETIEAAKEEFENWIA 308 (422)
T ss_pred HHHHHHHHHHHHHhccccCCCcccCCCCCceEeEEEeeCCCCCCccCcEEEEEEEEEECCCCCHHHHHHHHHHHHH
Confidence 99999998875421 1111 2458999999999999999999999999999999999999998888764
No 6
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=5.1e-45 Score=338.38 Aligned_cols=255 Identities=23% Similarity=0.310 Sum_probs=220.5
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeee---ccCCceEEEEecCCCCcEEEEEEecccCCCCCCCCCc
Q 022137 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAY---PVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWE 114 (302)
Q Consensus 38 ~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~---~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~w~ 114 (302)
++.++++++|+++||++++|.++++||.++|+++|++++. .+++.|+++.+++++ |+|+|+||+||||.++.+.|+
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~g~~~-~~il~~~H~DtVp~~~~~~w~ 80 (377)
T PRK08588 2 EEKIQILADIVKINSVNDNEIEVANYLQDLFAKHGIESKIVKVNDGRANLVAEIGSGS-PVLALSGHMDVVAAGDVDKWT 80 (377)
T ss_pred hHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCceEEEecCCCCceEEEEeCCCC-ceEEEEeeecccCCCCcccCc
Confidence 5678899999999999999999999999999999999765 246789999996544 899999999999998777895
Q ss_pred ---cc-cccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCCCCCCceEEEee
Q 022137 115 ---HK-SKIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMH 186 (302)
Q Consensus 115 ---~~-~~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~ 186 (302)
|. ..+||++|||| ||++++++|.|+++|++.+..++++|.|+|++||| ++.|++++++++.++++|+++..+
T Consensus 81 ~~Pf~~~~~~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~l~~~~dEE~g~~G~~~~~~~~~~~~~d~~i~~e 160 (377)
T PRK08588 81 YDPFELTEKDGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGTIRLLATAGEEVGELGAKQLTEKGYADDLDALIIGE 160 (377)
T ss_pred CCCCCeEEECCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCcEEEEEEcccccCchhHHHHHhcCccCCCCEEEEec
Confidence 44 35789999999 48999999999999999887889999999999999 568999999998777788776543
Q ss_pred ccCCCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhc---CCCCCCeeEEEEEEe
Q 022137 187 IDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISRE---ADPLQSLVLSVTYVR 263 (302)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~---~~~~~~~~~~~~~i~ 263 (302)
|++. .+..+++|..+++|+++|+++|++.|+.|.||+..+++++..++++..+. ...++..++|++.|+
T Consensus 161 -----p~~~---~i~~~~~G~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~t~~v~~i~ 232 (377)
T PRK08588 161 -----PSGH---GIVYAHKGSMDYKVTSTGKAAHSSMPELGVNAIDPLLEFYNEQKEYFDSIKKHNPYLGGLTHVVTIIN 232 (377)
T ss_pred -----CCCc---eeEEEEEEEEEEEEEEEeechhccCCccccCHHHHHHHHHHHHHHHhhhhcccCccCCCCceeeeEEe
Confidence 3332 12345789999999999999999999999999999999999998864322 123456899999999
Q ss_pred cCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 264 GGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 264 gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
||.+.|+||++|++.+|+|+.|.++.+++.++|+++++
T Consensus 233 gG~~~nvip~~~~~~~d~R~~p~~~~~~v~~~i~~~~~ 270 (377)
T PRK08588 233 GGEQVNSVPDEAELEFNIRTIPEYDNDQVISLLQEIIN 270 (377)
T ss_pred CCCcCCcCCCeEEEEEEeccCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998875
No 7
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=2e-43 Score=332.86 Aligned_cols=266 Identities=16% Similarity=0.195 Sum_probs=219.5
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhCCCCC--c-chHHHHHHHHHHHHhcCCCeeecc-----------CCceEEEEecCC-
Q 022137 27 NQVMISAQQDKDWLVSVRRQIHENPELL--F-EEHNTSALIRRELDKLGIPYAYPV-----------AKTGIVAQIGSG- 91 (302)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~l~~ips~~--~-~E~~~a~~l~~~l~~~g~~~~~~~-----------~~~nvia~~~~~- 91 (302)
+++.++++++++++++++++|++|||++ + +|+++++||.++|+++|++++... .+.|++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~Lv~i~S~~~~g~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~nlia~~~g~~ 82 (427)
T PRK13013 3 DRLFAAIEARRDDLVALTQDLIRIPTLNPPGRAYREICEFLAARLAPRGFEVELIRAEGAPGDSETYPRWNLVARRQGAR 82 (427)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhcCCCcCCCCccHHHHHHHHHHHHHHCCCceEEEecCCCCcccccCCcceEEEEecCCC
Confidence 3577788889999999999999999986 3 568999999999999999987531 156999999654
Q ss_pred CCcEEEEEEecccCCCCCCCCC---cccc-ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-c
Q 022137 92 SRPVVVLRADMDALPLQELVEW---EHKS-KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-G 163 (302)
Q Consensus 92 ~~~~i~l~~H~DtVp~~~~~~w---~~~~-~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g 163 (302)
++|+|+|+||+||||.++ .| ||.+ .+||++|||| |||+++++|+|+++|++.+..++++|.|+|+++|| |
T Consensus 83 ~~~~i~l~gH~DvVp~~~--~W~~~Pf~~~~~dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g 160 (427)
T PRK13013 83 DGDCVHFNSHHDVVEVGH--GWTRDPFGGEVKDGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSIEISGTADEESG 160 (427)
T ss_pred CCCEEEEEeccccCCCCC--CCcCCCCCceEECCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccC
Confidence 458999999999999874 57 4553 5789999998 69999999999999998887788999999999999 4
Q ss_pred c-CcHHHHHHcCCCC--CCceEEEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHH
Q 022137 164 G-AGAFHMIKEGALG--DSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILA 240 (302)
Q Consensus 164 ~-~G~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~ 240 (302)
+ .|.+++++++.++ .+|+++..+ |++.. .+..+++|..+++|+++|+++|++.|+.|+||++.+++++.+
T Consensus 161 ~~~g~~~l~~~~~~~~~~~d~~i~~e-----p~~~~--~i~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~l~~ 233 (427)
T PRK13013 161 GFGGVAYLAEQGRFSPDRVQHVIIPE-----PLNKD--RICLGHRGVWWAEVETRGRIAHGSMPFLGDSAIRHMGAVLAE 233 (427)
T ss_pred ChhHHHHHHhcCCccccCCCEEEEec-----CCCCC--ceEEeeeeEEEEEEEEEccccccCCCCcCcCHHHHHHHHHHH
Confidence 4 4788888877655 457777643 44421 123567899999999999999999999999999999999999
Q ss_pred HHHhhhhc-----CC-C-----CCCeeEEEEEEecCCcC----------cccCCeEEEEEEEecCChhhHHHHHHHHHHh
Q 022137 241 LQQLISRE-----AD-P-----LQSLVLSVTYVRGGTAF----------NIIPPFVEFGGTLRSLTTEGLYQLQKRLKEF 299 (302)
Q Consensus 241 l~~~~~~~-----~~-~-----~~~~~~~~~~i~gg~~~----------n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~ 299 (302)
|+++..+. .. + ....++|++.|+||... |+||++|++.+|+|+.|.++.+++.++|+++
T Consensus 234 l~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~~~~~~~~~~~n~IPd~a~~~idiR~~p~~~~~~v~~~i~~~ 313 (427)
T PRK13013 234 IEERLFPLLATRRTAMPVVPEGARQSTLNINSIHGGEPEQDPDYTGLPAPCVADRCRIVIDRRFLIEEDLDEVKAEITAL 313 (427)
T ss_pred HHHHhhhhhhcccccCCCCCcccCCCceeeeEEeCCCccccccccccccccCCceEEEEEEEEeCCCCCHHHHHHHHHHH
Confidence 97653210 00 0 13578999999999766 9999999999999999999999999999887
Q ss_pred hh
Q 022137 300 DR 301 (302)
Q Consensus 300 ~~ 301 (302)
++
T Consensus 314 i~ 315 (427)
T PRK13013 314 LE 315 (427)
T ss_pred HH
Confidence 64
No 8
>PRK06837 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=4.1e-43 Score=330.56 Aligned_cols=269 Identities=17% Similarity=0.204 Sum_probs=227.8
Q ss_pred HHhHHHHHHHHHhhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeec--------------------cCCc
Q 022137 23 EILTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYP--------------------VAKT 82 (302)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~--------------------~~~~ 82 (302)
+.+.+++.+++++..+++++++++|++|||++++|.++++||.++|+++|++++.. ++++
T Consensus 5 ~~~~~~~~~~i~~~~~~~~~~l~~li~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (427)
T PRK06837 5 PDLTQRILAAVDAGFDAQVAFTQDLVRFPSTRGAEAPCQDFLARAFRERGYEVDRWSIDPDDLKSHPGAGPVEIDYSGAP 84 (427)
T ss_pred hHHHHHHHHHHHhhhHHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHCCCceEEecCCHHHhhhcccccccccccCCCc
Confidence 35677899999999999999999999999999999999999999999999997541 3578
Q ss_pred eEEEEecCC--CCcEEEEEEecccCCCCCCCCCc---ccc-ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceE
Q 022137 83 GIVAQIGSG--SRPVVVLRADMDALPLQELVEWE---HKS-KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTV 153 (302)
Q Consensus 83 nvia~~~~~--~~~~i~l~~H~DtVp~~~~~~w~---~~~-~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i 153 (302)
||++.+++. .+|+|+|+|||||||+++.+.|+ |.. .+||++|||| |||+++++|.|+++|++.+..++++|
T Consensus 85 nl~a~~~g~~~~~~~il~~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~~~i 164 (427)
T PRK06837 85 NVVGTYRPAGKTGRSLILQGHIDVVPEGPLDLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGLAPAARV 164 (427)
T ss_pred eEEEEecCCCCCCCeEEEEeecccCCCCCccccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcE
Confidence 999999653 25899999999999998766785 432 4789999999 48999999999999998887889999
Q ss_pred EEEEeecCC-ccCcHHHHHHcCCCCCCceEEEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHH
Q 022137 154 RILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPIL 232 (302)
Q Consensus 154 ~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~ 232 (302)
.|+|+++|| ++.|+..++..++ ..|+++.. +|++. .+..+++|..+++|+++|+++|++.|+.|.||+.
T Consensus 165 ~~~~~~dEE~~g~g~~~~~~~~~--~~d~~iv~-----ep~~~---~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~ 234 (427)
T PRK06837 165 HFQSVIEEESTGNGALSTLQRGY--RADACLIP-----EPTGE---KLVRAQVGVIWFRLRVRGAPVHVREAGTGANAID 234 (427)
T ss_pred EEEEEeccccCCHhHHHHHhcCc--CCCEEEEc-----CCCCC---ccccccceeEEEEEEEEeeccccCCcccCcCHHH
Confidence 999999999 6678888877764 46776654 24443 2345678999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhcC----------CCCCCeeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 233 TASSVILALQQLISREA----------DPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 233 ~~~~~i~~l~~~~~~~~----------~~~~~~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
.+++++..|+++..... +...+.++|++.|+||.+.|+||++|.+.+++|+.|.++.+++.++|+++++
T Consensus 235 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~t~ni~~i~gG~~~nvVP~~~~~~~~ir~~p~~~~~~v~~~i~~~~~ 313 (427)
T PRK06837 235 AAYHLIQALRELEAEWNARKASDPHFEDVPHPINFNVGIIKGGDWASSVPAWCDLDCRIAIYPGVTAADAQAEIEACLA 313 (427)
T ss_pred HHHHHHHHHHHHHHHHhhcccCCCcccCCCCceeEeeeeEeCCCCCCccCCEEEEEEEEeECCCCCHHHHHHHHHHHHH
Confidence 99999999987753210 0113468999999999999999999999999999999999999999988764
No 9
>PRK13004 peptidase; Reviewed
Probab=100.00 E-value=6.3e-43 Score=326.67 Aligned_cols=265 Identities=17% Similarity=0.195 Sum_probs=225.3
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCCCCcEEEEEEecccC
Q 022137 26 TNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDAL 105 (302)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtV 105 (302)
.+.+.++++++++++++++++|+++||++++|.++++||.++|+++|+++...+..+|+++.+++++ |+|+|+||+|||
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~lv~ips~s~~e~~~a~~l~~~l~~~G~~~~~~~~~~n~~a~~~~~~-~~i~~~~H~DtV 81 (399)
T PRK13004 3 FKLILMLAEKYKADMTRFLRDLIRIPSESGDEKRVVKRIKEEMEKVGFDKVEIDPMGNVLGYIGHGK-KLIAFDAHIDTV 81 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCcEEEEcCCCeEEEEECCCC-cEEEEEeccCcc
Confidence 4678889999999999999999999999999999999999999999998655556789999997654 899999999999
Q ss_pred CCCCCCCCcccc----ccCCceecCCC---cHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCCc--cCcHHHHHHcCCC
Q 022137 106 PLQELVEWEHKS----KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG--GAGAFHMIKEGAL 176 (302)
Q Consensus 106 p~~~~~~w~~~~----~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg--~~G~~~~~~~~~~ 176 (302)
|.++.+.|.+++ .+||++||||+ |++++++|+|+++|++.+..++++|.++|+++||. +.|+++++++..+
T Consensus 82 p~~~~~~w~~~P~~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~g~~~~~~~~~~~~ 161 (399)
T PRK13004 82 GIGDIKNWDFDPFEGEEDDGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYTLYVTGTVQEEDCDGLCWRYIIEEDKI 161 (399)
T ss_pred CCCChhhcccCCCccEEECCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCeEEEEEEcccccCcchhHHHHHHhcCC
Confidence 997766786543 46899999994 89999999999999998877899999999999993 4577888886544
Q ss_pred CCCceEEEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhh--cCCCCCC
Q 022137 177 GDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISR--EADPLQS 254 (302)
Q Consensus 177 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~--~~~~~~~ 254 (302)
.+|++++.+ |++. .+..+++|..+++|+++|+++|++.|+.|+||+..+++++..|+++... .....+.
T Consensus 162 -~~d~~i~~e-----~~~~---~i~~~~~G~~~~~v~v~G~~~Ha~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~ 232 (399)
T PRK13004 162 -KPDFVVITE-----PTDL---NIYRGQRGRMEIRVETKGVSCHGSAPERGDNAIYKMAPILNELEELNPNLKEDPFLGK 232 (399)
T ss_pred -CCCEEEEcc-----CCCC---ceEEecceEEEEEEEEeccccccCCCCCCCCHHHHHHHHHHHHHhhccccccCCcCCC
Confidence 368877653 3322 1234578999999999999999999999999999999999999987543 2223345
Q ss_pred eeEEEEEEecC-CcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhh
Q 022137 255 LVLSVTYVRGG-TAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFD 300 (302)
Q Consensus 255 ~~~~~~~i~gg-~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~ 300 (302)
.+++++.|.+| .+.|+||++|++.+|+|++|.++.+++.++|+++.
T Consensus 233 ~~~~v~~i~~g~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~ 279 (399)
T PRK13004 233 GTLTVSDIFSTSPSRCAVPDSCAISIDRRLTVGETWESVLAEIRALP 279 (399)
T ss_pred ceEEEeeeecCCCCCCccCCEEEEEEEEcCCCCCCHHHHHHHHHHHH
Confidence 68999999876 59999999999999999999999999999998873
No 10
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=100.00 E-value=6e-43 Score=326.39 Aligned_cols=265 Identities=17% Similarity=0.180 Sum_probs=223.4
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCCCCcEEEEEEecccCC
Q 022137 27 NQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALP 106 (302)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp 106 (302)
+++.++++++++++++++++|++|||++++|.++++||.++|+++|+++...+..+|+++.++++ .|+|+|+||+||||
T Consensus 2 ~~~~~~~~~~~~~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~v~~~~g~~-~~~l~l~~H~DtVp 80 (395)
T TIGR03526 2 NQIKSEAEKYRGDMIRFLRDLVAIPSESGDEGRVALRIKQEMEKLGFDKVEIDPMGNVLGYIGHG-PKLIAMDAHIDTVG 80 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEEEcCCCcEEEEeCCC-CCEEEEEeeccccC
Confidence 46788899999999999999999999999999999999999999999854444567999998543 48899999999999
Q ss_pred CCCCCCCcccc----ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCCc--cCcHHHHHHcCCCC
Q 022137 107 LQELVEWEHKS----KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG--GAGAFHMIKEGALG 177 (302)
Q Consensus 107 ~~~~~~w~~~~----~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg--~~G~~~~~~~~~~~ 177 (302)
+++.+.|.++| .+||++|||| |||+++++|+|++.|++++..+++++.++++++||+ +.|++++++++.++
T Consensus 81 ~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~g~~~~~~~~~~~~~ 160 (395)
T TIGR03526 81 IGDMDQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDKIK 160 (395)
T ss_pred CCCcccccCCCCceEEECCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceEEEEEecccccCCcHhHHHHHhccCCC
Confidence 98877896544 4689999999 699999999999999988766788999999999993 34667777765443
Q ss_pred CCceEEEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhc-CCC-CCCe
Q 022137 178 DSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISRE-ADP-LQSL 255 (302)
Q Consensus 178 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~-~~~-~~~~ 255 (302)
.|+++..+ |++. .+..+++|..+++|+++|+++|++.|+.|+||+..+++++..|+++.... .++ .+..
T Consensus 161 -~d~~i~~e-----p~~~---~i~~g~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~ 231 (395)
T TIGR03526 161 -PEFVVITE-----PTDM---NIYRGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGKG 231 (395)
T ss_pred -CCEEEecC-----CCCc---eEEEEcceEEEEEEEEecCCCccCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCcccCcc
Confidence 67777643 4432 23346789999999999999999999999999999999999998875422 122 3457
Q ss_pred eEEEEEEecCC-cCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 256 VLSVTYVRGGT-AFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 256 ~~~~~~i~gg~-~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
++|++.|++|. +.|+||++|++.+|+|++|+++.+++.+.|+++++
T Consensus 232 ~~~v~~i~~g~~~~nviP~~~~~~~d~R~~~~~~~~~~~~~i~~~~~ 278 (395)
T TIGR03526 232 TLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPA 278 (395)
T ss_pred ceeeeeeecCCCCCCccCCeEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 99999999875 89999999999999999999999999999988764
No 11
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=100.00 E-value=9.8e-43 Score=324.98 Aligned_cols=265 Identities=17% Similarity=0.172 Sum_probs=221.6
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCCCCcEEEEEEecccCC
Q 022137 27 NQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALP 106 (302)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp 106 (302)
+++.++++++++++++++++|+++||++++|.++++||.++|+++|+++...+..+|+++.++.+ +|+|+|+||+||||
T Consensus 2 ~~~~~~i~~~~~~~~~~~~~lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~n~~~~~g~~-~~~l~l~~H~DtVp 80 (395)
T TIGR03320 2 NQIKSEAKKYRGDMIRFLRDLVAIPSESGDEKRVAERIKEEMEKLGFDKVEIDPMGNVLGYIGHG-PKLIAMDAHIDTVG 80 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCcEEEECCCCCEEEEeCCC-CcEEEEEecccccC
Confidence 46788899999999999999999999999999999999999999999854444567999998543 48999999999999
Q ss_pred CCCCCCCcccc----ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCCccC--cHHHHHHcCCCC
Q 022137 107 LQELVEWEHKS----KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGA--GAFHMIKEGALG 177 (302)
Q Consensus 107 ~~~~~~w~~~~----~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~--G~~~~~~~~~~~ 177 (302)
.++.+.|+++| .+||++|||| |||+++++|+|+++|++.+..++++|.|++++|||.+. +.++++++..+
T Consensus 81 ~~~~~~w~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i~~~~~~dEE~~~g~~~~~~~~~~~~- 159 (395)
T TIGR03320 81 IGDSKQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDGI- 159 (395)
T ss_pred CCCccccccCCCceEEECCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceEEEEecccccccCchHHHHHHHhcCC-
Confidence 98877896543 4689999999 69999999999999998877778899999999999433 34567765433
Q ss_pred CCceEEEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhc-CCC-CCCe
Q 022137 178 DSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISRE-ADP-LQSL 255 (302)
Q Consensus 178 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~-~~~-~~~~ 255 (302)
.+|+++..+ |++. .+..+++|..+++|+++|+++|++.|+.|.||+..+++++..|+++.... .++ .+..
T Consensus 160 ~~d~~iv~e-----p~~~---~i~~g~~G~~~~~v~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~ 231 (395)
T TIGR03320 160 KPEFVVITE-----PTDM---NIYRGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGKG 231 (395)
T ss_pred CCCEEEEcC-----CCcc---ceEEecceEEEEEEEEeeeccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCcC
Confidence 367777643 4332 23346789999999999999999999999999999999999999875432 122 3456
Q ss_pred eEEEEEEecCC-cCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 256 VLSVTYVRGGT-AFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 256 ~~~~~~i~gg~-~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
+++++.|++|. +.|+||++|++.+|+|++|.++.+++.++|+++++
T Consensus 232 t~~v~~i~~g~~~~NviP~~~~~~~diR~~p~~~~~~i~~~i~~~~~ 278 (395)
T TIGR03320 232 TLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPA 278 (395)
T ss_pred ceeeeeeecCCCCcCccCCEEEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 99999999876 89999999999999999999999999999998753
No 12
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=100.00 E-value=2.7e-42 Score=323.31 Aligned_cols=264 Identities=22% Similarity=0.284 Sum_probs=223.4
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHhCCCCCcch---HHHHHHHHHHHHhcCCCeeecc----CCceEEEEecCCCCcEEE
Q 022137 25 LTNQVMISAQQDKDWLVSVRRQIHENPELLFEE---HNTSALIRRELDKLGIPYAYPV----AKTGIVAQIGSGSRPVVV 97 (302)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~l~~ips~~~~E---~~~a~~l~~~l~~~g~~~~~~~----~~~nvia~~~~~~~~~i~ 97 (302)
..+++.++++++++++++++++|++|||++++| .++++||.++|+++|++++... .++|+++.+++.++|+|+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~lia~~~g~~~~~il 103 (410)
T PRK06133 24 PDAELLAAAQQEQPAYLDTLKELVSIESGSGDAEGLKQVAALLAERLKALGAKVERAPTPPSAGDMVVATFKGTGKRRIM 103 (410)
T ss_pred hHHHHHHHHHHhHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEEEECCCCCceEE
Confidence 346688899999999999999999999999875 4899999999999999987632 367999999665458999
Q ss_pred EEEecccCCCCCCCCCcccc--ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHH
Q 022137 98 LRADMDALPLQELVEWEHKS--KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMI 171 (302)
Q Consensus 98 l~~H~DtVp~~~~~~w~~~~--~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~ 171 (302)
|+||+||||.+. .|.+.+ .+||++|||| ||++++++|++++.|++.+..++++|.|+|+++|| ++.|+++++
T Consensus 104 l~~H~D~Vp~~~--~w~~~Pf~~~~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~~ 181 (410)
T PRK06133 104 LIAHMDTVYLPG--MLAKQPFRIDGDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLTVLFNPDEETGSPGSRELI 181 (410)
T ss_pred EEeecCccCCCC--ccCCCCEEEECCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCcccCCccHHHHH
Confidence 999999999864 474332 5789999999 58999999999999998887788999999999999 668999998
Q ss_pred HcCCCCCCceEEEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCC-CCCCCCCHHHHHHHHHHHHHHhhhhcCC
Q 022137 172 KEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA-MPHSTIDPILTASSVILALQQLISREAD 250 (302)
Q Consensus 172 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~-~p~~g~Nai~~~~~~i~~l~~~~~~~~~ 250 (302)
++.. .+.|++++.++. .+.+.+ ..+++|..+++++++|+++||+ .|+.|.||+..+++++..|+++. .
T Consensus 182 ~~~~-~~~d~~i~~ep~--~~~~~v----~~~~~G~~~~~v~v~G~~~Hsg~~p~~g~nAi~~~~~~i~~l~~~~----~ 250 (410)
T PRK06133 182 AELA-AQHDVVFSCEPG--RAKDAL----TLATSGIATALLEVKGKASHAGAAPELGRNALYELAHQLLQLRDLG----D 250 (410)
T ss_pred HHHh-ccCCEEEEeCCC--CCCCCE----EEeccceEEEEEEEEeeccccCCCcccCcCHHHHHHHHHHHHHhcc----C
Confidence 7643 357888876532 222333 2356899999999999999986 89999999999999999998763 2
Q ss_pred CCCCeeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 251 PLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 251 ~~~~~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
+....+++++.|+||.+.|+||++|++.+|+|+.|.++.+++.++|+++++
T Consensus 251 ~~~~~t~~~~~i~gG~~~nvIP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (410)
T PRK06133 251 PAKGTTLNWTVAKAGTNRNVIPASASAQADVRYLDPAEFDRLEADLQEKVK 301 (410)
T ss_pred CCCCeEEEeeEEECCCCCceeCCccEEEEEEEECCHHHHHHHHHHHHHHHh
Confidence 234578999999999999999999999999999999999999999999875
No 13
>PRK07338 hypothetical protein; Provisional
Probab=100.00 E-value=7.2e-42 Score=319.86 Aligned_cols=263 Identities=17% Similarity=0.189 Sum_probs=219.5
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHhCCCCCcch---HHHHHHHHHHHHhcCCCeeecc-----------------CCceE
Q 022137 25 LTNQVMISAQQDKDWLVSVRRQIHENPELLFEE---HNTSALIRRELDKLGIPYAYPV-----------------AKTGI 84 (302)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~l~~ips~~~~E---~~~a~~l~~~l~~~g~~~~~~~-----------------~~~nv 84 (302)
...++.++++++++++++.+++|+++||+++++ .++++||.++|+++|++++..+ .++|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~nl 83 (402)
T PRK07338 4 EERAVLDLIDDRQAPMLEQLIAWAAINSGSRNLDGLARMAELLADAFAALPGEIELIPLPPVEVIDADGRTLEQAHGPAL 83 (402)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCCccccccccccccccCcCCeE
Confidence 355678888889999999999999999999764 6899999999999999987521 12699
Q ss_pred EEEecCCCCcEEEEEEecccCCCCCCCCCcccc---ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEe
Q 022137 85 VAQIGSGSRPVVVLRADMDALPLQELVEWEHKS---KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQ 158 (302)
Q Consensus 85 ia~~~~~~~~~i~l~~H~DtVp~~~~~~w~~~~---~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~ 158 (302)
+++++++.+++|+|+||+||||++. .||.. ++||++|||| |||+++++|+|+++|++.+..++++|.|+|+
T Consensus 84 ~a~~~~~~~~~lll~gH~DvVp~~~---~Pf~~~~~~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~~~~ 160 (402)
T PRK07338 84 HVSVRPEAPRQVLLTGHMDTVFPAD---HPFQTLSWLDDGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDVLIN 160 (402)
T ss_pred EEEECCCCCccEEEEeecCccCCCC---CcccCCeEeeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEE
Confidence 9999654336899999999999863 56653 6799999999 6999999999999999877777899999999
Q ss_pred ecCC-ccCcHHHHHHcCCCCCCceEEEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCC-CCCCCCCHHHHHHH
Q 022137 159 PAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA-MPHSTIDPILTASS 236 (302)
Q Consensus 159 ~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~-~p~~g~Nai~~~~~ 236 (302)
+||| |+.|++.+++++. ...++.+..++ ..+.+.+ ..+++|..+++|+++|+++|++ .|+.|.||+..+++
T Consensus 161 ~dEE~g~~g~~~~~~~~~-~~~~~~i~~ep--~~~~~~v----~~~~kG~~~~~v~v~G~~aHs~~~p~~g~nAi~~~~~ 233 (402)
T PRK07338 161 PDEEIGSPASAPLLAELA-RGKHAALTYEP--ALPDGTL----AGARKGSGNFTIVVTGRAAHAGRAFDEGRNAIVAAAE 233 (402)
T ss_pred CCcccCChhhHHHHHHHh-ccCcEEEEecC--CCCCCcE----EeecceeEEEEEEEEeEcccCCCCcccCccHHHHHHH
Confidence 9999 6679999888754 34566665533 2222332 2346799999999999999999 48999999999999
Q ss_pred HHHHHHHhhhhcCCCCCCeeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 237 VILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 237 ~i~~l~~~~~~~~~~~~~~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
++++|+++... ....++|++.|+||.+.|+||++|++.+|+|+.|.++.+++.++|+++++
T Consensus 234 ~i~~l~~l~~~----~~~~t~~vg~i~gG~~~nvVP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~ 294 (402)
T PRK07338 234 LALALHALNGQ----RDGVTVNVAKIDGGGPLNVVPDNAVLRFNIRPPTPEDAAWAEAELKKLIA 294 (402)
T ss_pred HHHHHHhhhcc----CCCcEEEEEEEecCCCCceeccccEEEEEeccCCHHHHHHHHHHHHHHHh
Confidence 99999886422 23469999999999999999999999999999999999999999999875
No 14
>PRK08596 acetylornithine deacetylase; Validated
Probab=100.00 E-value=8.9e-42 Score=320.91 Aligned_cols=263 Identities=18% Similarity=0.154 Sum_probs=219.7
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhCCCCC---cchHHHHHHHHHHHHhcCCCeee---ccCCceEEEEecCC-C--CcEEEE
Q 022137 28 QVMISAQQDKDWLVSVRRQIHENPELL---FEEHNTSALIRRELDKLGIPYAY---PVAKTGIVAQIGSG-S--RPVVVL 98 (302)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~l~~ips~~---~~E~~~a~~l~~~l~~~g~~~~~---~~~~~nvia~~~~~-~--~~~i~l 98 (302)
++.+++++..+++++++++|++|||++ ++|.++++||.++|+++|++++. .++++|+++.++++ + +|+|+|
T Consensus 3 ~~~~~i~~~~~~~~~~l~~Lv~i~S~s~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~nvia~~~g~~~~~~~~lll 82 (421)
T PRK08596 3 QLLEQIELRKDELLELLKTLVRFETPAPPARNTNEAQEFIAEFLRKLGFSVDKWDVYPNDPNVVGVKKGTESDAYKSLII 82 (421)
T ss_pred HHHHHHHhhHHHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHCCCeEEEEEccCCCceEEEEecCCCCCCCcEEEE
Confidence 466778888899999999999999998 47889999999999999999876 24679999999653 2 368999
Q ss_pred EEecccCCCCCCCCCcccc----ccCCceecCCC---cHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHH
Q 022137 99 RADMDALPLQELVEWEHKS----KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHM 170 (302)
Q Consensus 99 ~~H~DtVp~~~~~~w~~~~----~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~ 170 (302)
+||+||||.++.+.|++++ .+||++||||+ ||+++++|+|+++|++.+..++++|.|+|+++|| ++.|++++
T Consensus 83 ~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~G~~~~ 162 (421)
T PRK08596 83 NGHMDVAEVSADEAWETNPFEPTIKDGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGDLIFQSVIGEEVGEAGTLQC 162 (421)
T ss_pred eccccccCCCCccccccCCCCcEEECCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCcEEEEEEeccccCCcCHHHH
Confidence 9999999998777795432 47999999994 9999999999999999888889999999999999 67899999
Q ss_pred HHcCCCCCCceEEEeeccCCCCCcceeeecccccceeeEEEEEEEecc----------cCCCCCCCCCCHHHHHHHHHHH
Q 022137 171 IKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRG----------GHAAMPHSTIDPILTASSVILA 240 (302)
Q Consensus 171 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~----------~Ha~~p~~g~Nai~~~~~~i~~ 240 (302)
++++. ..|+++..+ |++.. ..+++|..++.++++|++ +|++.|+.|.||++.+++++.+
T Consensus 163 ~~~~~--~~d~~i~~e-----p~~~~----~~~~~G~~~~~~~v~g~~~~~~~~~~~~~H~~~p~~G~nai~~~~~~i~~ 231 (421)
T PRK08596 163 CERGY--DADFAVVVD-----TSDLH----MQGQGGVITGWITVKSPQTFHDGTRRQMIHAGGGLFGASAIEKMMKIIQS 231 (421)
T ss_pred HhcCC--CCCEEEECC-----CCCCc----cccccceeeEEEEEEeecccccccccccccccCCccCcCHHHHHHHHHHH
Confidence 98864 367777653 33321 135678887788888763 6999999999999999999999
Q ss_pred HHHhhhhc-----CC--CCCCeeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 241 LQQLISRE-----AD--PLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 241 l~~~~~~~-----~~--~~~~~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
|+++.... .. ..+..++|++.|+||...|+||++|++.+|+|+.|+++.+++.++|+++++
T Consensus 232 l~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~~~~~~d~R~~p~~~~~~v~~~i~~~~~ 299 (421)
T PRK08596 232 LQELERHWAVMKSYPGFPPGTNTINPAVIEGGRHAAFIADECRLWITVHFYPNETYEQVIKEIEEYIG 299 (421)
T ss_pred HHHHHHHHhhcccCccCCCCCcceeeeeeeCCCCCCccCceEEEEEEeeeCCCCCHHHHHHHHHHHHH
Confidence 98764211 11 124479999999999999999999999999999999999999999998764
No 15
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=100.00 E-value=1.6e-42 Score=321.54 Aligned_cols=253 Identities=20% Similarity=0.319 Sum_probs=211.7
Q ss_pred HHHHHHHhCCC---CCcchHHHHHHHHHHHHhcCCCeeec---cCCc----eEEEEecCC-CCcEEEEEEecccCCCCCC
Q 022137 42 SVRRQIHENPE---LLFEEHNTSALIRRELDKLGIPYAYP---VAKT----GIVAQIGSG-SRPVVVLRADMDALPLQEL 110 (302)
Q Consensus 42 ~~~~~l~~ips---~~~~E~~~a~~l~~~l~~~g~~~~~~---~~~~----nvia~~~~~-~~~~i~l~~H~DtVp~~~~ 110 (302)
+++++|++||| ++++|.++++||.++|+++|++++.. .... |+++.+.+. .+|+|+|+|||||||.++.
T Consensus 2 ~~l~~lv~i~s~~~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ill~~H~DtVp~~~~ 81 (375)
T TIGR01910 2 ELLKDLISIPSVNPPGGNEETIANYIKDLLREFGFSTDVIEITDDRLKVLGKVVVKEPGNGNEKSLIFNGHYDVVPAGDL 81 (375)
T ss_pred hhHHhhhcCCCCCCCCcCHHHHHHHHHHHHHHCCCceEEEecCchhcccccceEEeccCCCCCCEEEEecccccccCCCh
Confidence 67899999999 88999999999999999999998652 1223 355555443 3589999999999999877
Q ss_pred CCCc---ccc-ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCCCCCCceE
Q 022137 111 VEWE---HKS-KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAI 182 (302)
Q Consensus 111 ~~w~---~~~-~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~ 182 (302)
++|+ |.. .++|++|||| +|++++++|++++.|++.+..++++|.|+|+++|| ++.|++++++++.++++|++
T Consensus 82 ~~w~~~Pf~~~~~~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~~~d~~ 161 (375)
T TIGR01910 82 ELWKTDPFKPVEKDGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQSVVDEESGEAGTLYLLQRGYFKDADGV 161 (375)
T ss_pred hhCcCCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEEcCcccCchhHHHHHHcCCCCCCCEE
Confidence 7885 442 5689999999 48999999999999998887789999999999999 67899999998776667877
Q ss_pred EEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhcCC------CCCCee
Q 022137 183 FGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREAD------PLQSLV 256 (302)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~~~------~~~~~~ 256 (302)
+..+ |++.. .+..+++|..+++|+++|+++|++.|+.|.||+..+++++.+|+++...... ....++
T Consensus 162 i~~~-----~~~~~--~v~~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t 234 (375)
T TIGR01910 162 LIPE-----PSGGD--NIVIGHKGSIWFKLRVKGKQAHASFPQFGVNAIMKLAKLITELNELEEHIYARNSYGFIPGPIT 234 (375)
T ss_pred EECC-----CCCCC--ceEEEecceEEEEEEEeeeecccCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccccCCCcc
Confidence 7643 33211 1234578999999999999999999999999999999999999987532211 124579
Q ss_pred EEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 257 LSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 257 ~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
++++.|+||...|+||++|++.+|+|+.|.++.+++.++|+++++
T Consensus 235 ~~i~~i~gG~~~nviP~~~~~~~diR~~~~~~~~~~~~~i~~~~~ 279 (375)
T TIGR01910 235 FNPGVIKGGDWVNSVPDYCEFSIDVRIIPEENLDEVKQIIEDVVK 279 (375)
T ss_pred ccceeEECCCCcCcCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999875
No 16
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=100.00 E-value=6e-42 Score=316.22 Aligned_cols=248 Identities=23% Similarity=0.324 Sum_probs=208.3
Q ss_pred HHHHHHHhCCCCCcch-HHHHHHHHHHHHhcCCCeeecc-----CCceEEEEecCCCCcEEEEEEecccCCCCCCCCCc-
Q 022137 42 SVRRQIHENPELLFEE-HNTSALIRRELDKLGIPYAYPV-----AKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWE- 114 (302)
Q Consensus 42 ~~~~~l~~ips~~~~E-~~~a~~l~~~l~~~g~~~~~~~-----~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~w~- 114 (302)
+++++|++|||++++| .++++||.++|+++|++++... .++|+++.++++.+|+|+|+||+||||.++ +.|+
T Consensus 1 ~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~nl~~~~~~~~~~~i~l~~H~Dtvp~~~-~~w~~ 79 (364)
T TIGR01892 1 EILTKLVAFDSTSFRPNVDLIDWAQAYLEALGFSVEVQPFPDGAEKSNLVAVIGPSGAGGLALSGHTDVVPYDD-AAWTR 79 (364)
T ss_pred ChHHHhhCcCCcCCccHHHHHHHHHHHHHHcCCeEEEEeCCCCCccccEEEEecCCCCCeEEEEcccccccCCC-CcCCC
Confidence 3688999999999865 7999999999999999987532 468999999654458999999999999976 4785
Q ss_pred --cc-cccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCCCCCCceEEEeec
Q 022137 115 --HK-SKIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHI 187 (302)
Q Consensus 115 --~~-~~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~ 187 (302)
|. .++||++|||| |||+++++|+++++|++. .++++|.|+|+++|| ++.|++++++++.+ ..|+++..
T Consensus 80 ~Pf~~~~~~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~~EE~g~~G~~~~~~~~~~-~~d~~i~~-- 154 (364)
T TIGR01892 80 DPFRLTEKDGRLYGRGTCDMKGFLACALAAAPDLAAE--QLKKPLHLALTADEEVGCTGAPKMIEAGAG-RPRHAIIG-- 154 (364)
T ss_pred CCCcceeeCCEEEecCccccchHHHHHHHHHHHHHhc--CcCCCEEEEEEeccccCCcCHHHHHHhcCC-CCCEEEEC--
Confidence 44 36789999999 799999999999999875 467899999999999 67899999988753 46766653
Q ss_pred cCCCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhcC-----CCC--CCeeEEEE
Q 022137 188 DVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREA-----DPL--QSLVLSVT 260 (302)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~~-----~~~--~~~~~~~~ 260 (302)
+|++... ..+++|..+++|+++|+++|++.|+.|.||+..+++++.+|+++..... .++ ..+++|++
T Consensus 155 ---ep~~~~~---~~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 228 (364)
T TIGR01892 155 ---EPTRLIP---VRAHKGYASAEVTVRGRSGHSSYPDSGVNAIFRAGRFLQRLVHLADTLLREDLDEGFTPPYTTLNIG 228 (364)
T ss_pred ---CCCCcee---EEeeceEEEEEEEEEcccccccCCccCcCHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCceEEEe
Confidence 4656532 2356799999999999999999999999999999999999987643211 111 24799999
Q ss_pred EEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 261 YVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 261 ~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
.|+||.+.|+||++|++.+|+|++|.++.+++.++|+++++
T Consensus 229 ~i~gg~~~nviP~~~~~~~diR~~p~~~~~~v~~~i~~~~~ 269 (364)
T TIGR01892 229 VIQGGKAVNIIPGACEFVFEWRPIPGMDPEELLQLLETIAQ 269 (364)
T ss_pred eeecCCCCcccCCeEEEEEEeecCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998864
No 17
>PRK07522 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=5.6e-42 Score=318.79 Aligned_cols=253 Identities=21% Similarity=0.294 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHhCCCCCcch-HHHHHHHHHHHHhcCCCeeec----cCCceEEEEecCCCCcEEEEEEecccCCCCCCCC
Q 022137 38 DWLVSVRRQIHENPELLFEE-HNTSALIRRELDKLGIPYAYP----VAKTGIVAQIGSGSRPVVVLRADMDALPLQELVE 112 (302)
Q Consensus 38 ~~~~~~~~~l~~ips~~~~E-~~~a~~l~~~l~~~g~~~~~~----~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~ 112 (302)
.++++++++|++|||++++| .++++||.++|+++|+++++. ..++|+++.++++.+|+|+|+||+||||.++ ..
T Consensus 4 ~~~~~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~nv~a~~~~~~~~~ill~~H~Dtv~~~~-~~ 82 (385)
T PRK07522 4 MSSLDILERLVAFDTVSRDSNLALIEWVRDYLAAHGVESELIPDPEGDKANLFATIGPADRGGIVLSGHTDVVPVDG-QA 82 (385)
T ss_pred hhHHHHHHHHhCCCCcCCCccHHHHHHHHHHHHHcCCeEEEEecCCCCcccEEEEeCCCCCCeEEEEeecccccCCC-CC
Confidence 56889999999999999987 599999999999999998652 2468999999765458999999999999875 36
Q ss_pred Cc---ccc-ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCCC--CCCceE
Q 022137 113 WE---HKS-KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGAL--GDSEAI 182 (302)
Q Consensus 113 w~---~~~-~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~--~~~d~~ 182 (302)
|+ |.. .+||++|||| |||+++++|+++++|++. .++++|.|+|++||| ++.|++++++.... ..+|++
T Consensus 83 W~~~pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~dEE~g~~G~~~l~~~~~~~~~~~d~~ 160 (385)
T PRK07522 83 WTSDPFRLTERDGRLYGRGTCDMKGFIAAALAAVPELAAA--PLRRPLHLAFSYDEEVGCLGVPSMIARLPERGVKPAGC 160 (385)
T ss_pred CCCCCCceEEECCEEEeccccccchHHHHHHHHHHHHHhC--CCCCCEEEEEEeccccCCccHHHHHHHhhhcCCCCCEE
Confidence 75 443 4699999999 599999999999999876 467899999999999 66899999875321 235766
Q ss_pred EEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhcCC--C----C--CC
Q 022137 183 FGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREAD--P----L--QS 254 (302)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~~~--~----~--~~ 254 (302)
+.. +|++. .+..+++|..+++|+++|+++|++.|+.|.||+..+++++..|+++..+... + + ..
T Consensus 161 i~~-----ep~~~---~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 232 (385)
T PRK07522 161 IVG-----EPTSM---RPVVGHKGKAAYRCTVRGRAAHSSLAPQGVNAIEYAARLIAHLRDLADRLAAPGPFDALFDPPY 232 (385)
T ss_pred EEc-----cCCCC---eeeeeecceEEEEEEEEeeccccCCCccCcCHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCc
Confidence 643 35442 2345678999999999999999999999999999999999999887533211 1 1 13
Q ss_pred eeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 255 LVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 255 ~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
++++++.|+||.+.|+||++|++.+|+|++|.++.+++.++|+++++
T Consensus 233 ~t~~i~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~i~~~i~~~i~ 279 (385)
T PRK07522 233 STLQTGTIQGGTALNIVPAECEFDFEFRNLPGDDPEAILARIRAYAE 279 (385)
T ss_pred ceeEEeeeecCccccccCCceEEEEEEccCCCCCHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999998764
No 18
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.3e-41 Score=315.19 Aligned_cols=259 Identities=19% Similarity=0.237 Sum_probs=213.6
Q ss_pred HHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeee--ccCCceEEEEecCCCCcEEEEEEecccCCCCCCCCCc--
Q 022137 39 WLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAY--PVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWE-- 114 (302)
Q Consensus 39 ~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~--~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~w~-- 114 (302)
++++++++|++|||++++|.++++||.++|+++|++++. .+..+|+++.+++ ++|+|+|+||+||||.++.+.|+
T Consensus 3 ~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~n~~~~~g~-~~~~i~l~~H~D~Vp~g~~~~w~~~ 81 (375)
T PRK13009 3 DVLELAQDLIRRPSVTPDDAGCQDLLAERLEALGFTCERMDFGDVKNLWARRGT-EGPHLCFAGHTDVVPPGDLEAWTSP 81 (375)
T ss_pred hHHHHHHHHhCCCCCCCchhhHHHHHHHHHHHcCCeEEEeccCCCcEEEEEecC-CCCEEEEEeecccCCCCCcccCCCC
Confidence 578899999999999999999999999999999999875 2457899999854 45899999999999998777895
Q ss_pred -ccc-ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCCcc--CcHHHHHHcCC--CCCCceEEEe
Q 022137 115 -HKS-KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG--AGAFHMIKEGA--LGDSEAIFGM 185 (302)
Q Consensus 115 -~~~-~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~--~G~~~~~~~~~--~~~~d~~~~~ 185 (302)
|.+ .+||++|||| |||+++++|.++++|++.+..++++|+|+|+++||++ .|++.+++... ...+|+++..
T Consensus 82 Pf~~~~~~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~i~~ 161 (375)
T PRK13009 82 PFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIAFLITSDEEGPAINGTVKVLEWLKARGEKIDYCIVG 161 (375)
T ss_pred CCCcEEECCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEEEEEEeecccccccCHHHHHHHHHHcCcCCCEEEEc
Confidence 443 5689999998 4999999999999999887778899999999999943 59998875421 1246777665
Q ss_pred eccCCCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhcC-CCCCCeeEEEEEEec
Q 022137 186 HIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREA-DPLQSLVLSVTYVRG 264 (302)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~~-~~~~~~~~~~~~i~g 264 (302)
++......+. .+..+++|..+++|+++|+++|++.|+.|.||+..+++++.+|+++..+.. ..+.+.+++++.|+|
T Consensus 162 ep~~~~~~~~---~i~~g~~g~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~i~~i~~ 238 (375)
T PRK13009 162 EPTSTERLGD---VIKNGRRGSLTGKLTVKGVQGHVAYPHLADNPIHLAAPALAELAATEWDEGNEFFPPTSLQITNIDA 238 (375)
T ss_pred CCCcccCCCC---eEEEecceEEEEEEEEEecCcccCCCCcccCHHHHHHHHHHHHHhhhccCCCccCCCceEEEEEEec
Confidence 4322111111 134557899999999999999999999999999999999999987643322 234567899999998
Q ss_pred CC-cCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 265 GT-AFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 265 g~-~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
|. +.|+||++|++.+|+|++|..+.+++.++|+++++
T Consensus 239 G~~~~nvip~~~~~~~diR~~~~~~~e~i~~~i~~~~~ 276 (375)
T PRK13009 239 GTGATNVIPGELEAQFNFRFSTEHTAESLKARVEAILD 276 (375)
T ss_pred CCCCCcccCCcEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 86 78999999999999999999999999999998875
No 19
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=8.6e-42 Score=318.97 Aligned_cols=262 Identities=23% Similarity=0.277 Sum_probs=215.7
Q ss_pred hhHHHHHHHHHHHHhCCCCCc-----chHHHHHHHHHHHHhcCCC-eeec---c----C--CceEEEEecCC-CCcEEEE
Q 022137 35 QDKDWLVSVRRQIHENPELLF-----EEHNTSALIRRELDKLGIP-YAYP---V----A--KTGIVAQIGSG-SRPVVVL 98 (302)
Q Consensus 35 ~~~~~~~~~~~~l~~ips~~~-----~E~~~a~~l~~~l~~~g~~-~~~~---~----~--~~nvia~~~~~-~~~~i~l 98 (302)
++++++++++++|++|||+++ +|.++++||.++|+++|++ ++.. + . ++|+++.++++ ++++|+|
T Consensus 2 ~~~~~~~~~l~~lv~i~s~s~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~nl~~~~~g~~~~~~lll 81 (400)
T PRK13983 2 ELRDEMIELLSELIAIPAVNPDFGGEGEKEKAEYLESLLKEYGFDEVERYDAPDPRVIEGVRPNIVAKIPGGDGKRTLWI 81 (400)
T ss_pred chHHHHHHHHHHHhCcCCCCCCCCCccHHHHHHHHHHHHHHcCCceEEEEecCCcccccCCCccEEEEecCCCCCCeEEE
Confidence 356789999999999999984 5899999999999999998 6542 1 1 68999999664 3479999
Q ss_pred EEecccCCCCCCCCCcccc----ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-cc-CcHHH
Q 022137 99 RADMDALPLQELVEWEHKS----KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GG-AGAFH 169 (302)
Q Consensus 99 ~~H~DtVp~~~~~~w~~~~----~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~-~G~~~ 169 (302)
+||+||||.++.+.|++++ .+||++|||| ||++++++|.|+++|++.+..++++|.|+|+++|| |+ .|+++
T Consensus 82 ~~H~Dtvp~~~~~~W~~~p~~~~~~~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~~~ 161 (400)
T PRK13983 82 ISHMDVVPPGDLSLWETDPFKPVVKDGKIYGRGSEDNGQGIVSSLLALKALMDLGIRPKYNLGLAFVSDEETGSKYGIQY 161 (400)
T ss_pred EeeccccCCCCcccccCCCCcceeeCCEEEecCccCccchHHHHHHHHHHHHHhCCCCCCcEEEEEEeccccCCcccHHH
Confidence 9999999998777885443 4689999999 59999999999999998887899999999999999 55 58999
Q ss_pred HHHc--CCCCCCceEEEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHH-hhh
Q 022137 170 MIKE--GALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQ-LIS 246 (302)
Q Consensus 170 ~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~-~~~ 246 (302)
+++. +.+.+.|++++ ++.+.|++.. ...+++|..+++|+++|+++|++.|+.|+||+..+++++..+++ +..
T Consensus 162 ~~~~~~~~~~~~d~~i~--~~~~~~~~~~---i~~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~ 236 (400)
T PRK13983 162 LLKKHPELFKKDDLILV--PDAGNPDGSF---IEIAEKSILWLKFTVKGKQCHASTPENGINAHRAAADFALELDEALHE 236 (400)
T ss_pred HHhhcccccCCCCEEEE--ecCCCCCCce---eEEeecceEEEEEEEEeEccccCCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 9887 44556777665 3444566652 24567899999999999999999999999999999999999987 322
Q ss_pred hc--CCC-C--CCeeEEEEEEecC-CcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 247 RE--ADP-L--QSLVLSVTYVRGG-TAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 247 ~~--~~~-~--~~~~~~~~~i~gg-~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
.. .++ + ...+++++.+.+| .+.|+||++|++.+|+|++|+++.+++.++|+++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~nvvp~~~~~~~diR~~p~~~~~~v~~~l~~~~~ 297 (400)
T PRK13983 237 KFNAKDPLFDPPYSTFEPTKKEANVDNINTIPGRDVFYFDCRVLPDYDLDEVLKDIKEIAD 297 (400)
T ss_pred hhcccccccCCCCcccccceeecCCcCCcccCCeeEEEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 11 111 1 1246778888877 589999999999999999999999999999998875
No 20
>PRK05111 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.3e-41 Score=316.17 Aligned_cols=251 Identities=24% Similarity=0.290 Sum_probs=209.1
Q ss_pred HHHHHHHHHHHhCCCCCcch-------HHHHHHHHHHHHhcCCCeeec-----cCCceEEEEecCCCCcEEEEEEecccC
Q 022137 38 DWLVSVRRQIHENPELLFEE-------HNTSALIRRELDKLGIPYAYP-----VAKTGIVAQIGSGSRPVVVLRADMDAL 105 (302)
Q Consensus 38 ~~~~~~~~~l~~ips~~~~E-------~~~a~~l~~~l~~~g~~~~~~-----~~~~nvia~~~~~~~~~i~l~~H~DtV 105 (302)
+++++++++|++|||++++| .++++||.++|+++|++++.. ..+.|++++++++ .++|+|+||||||
T Consensus 5 ~~~i~~l~~lv~i~s~s~~e~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~nvia~~g~~-~~~il~~~H~Dvv 83 (383)
T PRK05111 5 PSFIEMYRALIATPSISATDPALDQSNRAVIDLLAGWFEDLGFNVEIQPVPGTRGKFNLLASLGSG-EGGLLLAGHTDTV 83 (383)
T ss_pred hHHHHHHHHHhCcCCcCCCCcccccchHHHHHHHHHHHHHCCCeEEEEecCCCCCCceEEEEeCCC-CCeEEEEeeecee
Confidence 47899999999999999876 579999999999999987652 1467999999544 3689999999999
Q ss_pred CCCCCCCC---ccc-cccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCCCC
Q 022137 106 PLQELVEW---EHK-SKIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALG 177 (302)
Q Consensus 106 p~~~~~~w---~~~-~~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~ 177 (302)
|..+ ..| ||+ ..+||++|||| |||+++++|++++.|++. .++++|.|+|+++|| ++.|++++++++.++
T Consensus 84 p~~~-~~W~~~Pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~ 160 (383)
T PRK05111 84 PFDE-GRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILEALRDIDLT--KLKKPLYILATADEETSMAGARAFAEATAIR 160 (383)
T ss_pred cCCC-CcCcCCCCccEEECCEEEecccccccHHHHHHHHHHHHHhhc--CCCCCeEEEEEeccccCcccHHHHHhcCCCC
Confidence 9864 457 455 35789999999 699999999999999864 467899999999999 668999999886544
Q ss_pred CCceEEEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhc----CCC--
Q 022137 178 DSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISRE----ADP-- 251 (302)
Q Consensus 178 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~----~~~-- 251 (302)
.|+++.. +|++.. +..+++|..+++|+++|+++|++.|+.|.||+..+++++.+++++.... ..+
T Consensus 161 -~d~~i~~-----ep~~~~---~~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~ 231 (383)
T PRK05111 161 -PDCAIIG-----EPTSLK---PVRAHKGHMSEAIRITGQSGHSSDPALGVNAIELMHDVIGELLQLRDELQERYHNPAF 231 (383)
T ss_pred -CCEEEEc-----CCCCCc---eeecccceEEEEEEEEeechhccCCccCcCHHHHHHHHHHHHHHHHHHHhccCCCccC
Confidence 4666643 355431 2346789999999999999999999999999999999999998764221 111
Q ss_pred -CCCeeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 252 -LQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 252 -~~~~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
...+++|++.|+||.+.|+||++|++.+|+|+.|.++.+++.++|++.++
T Consensus 232 ~~~~~t~~i~~i~gg~~~NvVP~~~~~~~diR~~p~~~~~~v~~~i~~~i~ 282 (383)
T PRK05111 232 TVPYPTLNLGHIHGGDAPNRICGCCELHFDIRPLPGMTLEDLRGLLREALA 282 (383)
T ss_pred CCCCCceeEeeeecCCcCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 13578999999999999999999999999999999999999999988764
No 21
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=100.00 E-value=1.4e-41 Score=314.69 Aligned_cols=257 Identities=20% Similarity=0.274 Sum_probs=211.1
Q ss_pred HHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeee--ccCCceEEEEecCCCCcEEEEEEecccCCCCCCCCCc---c
Q 022137 41 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAY--PVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWE---H 115 (302)
Q Consensus 41 ~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~--~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~w~---~ 115 (302)
++++++|++|||++++|.++++||.++|+++||+++. .++.+|+++.+++ .+|+|+|+||+||||.++.+.|. |
T Consensus 2 ~~~l~~lv~ips~s~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~~g~-~~~~i~~~~H~DtVp~~~~~~W~~~p~ 80 (370)
T TIGR01246 2 TELAKELISRPSVTPNDAGCQDIIAERLEKLGFEIEWMHFGDTKNLWATRGT-GEPVLAFAGHTDVVPAGPEEQWSSPPF 80 (370)
T ss_pred hHHHHHHhcCCCCCcchHHHHHHHHHHHHHCCCEEEEEecCCCceEEEEecC-CCcEEEEEccccccCCCCccccccCCC
Confidence 5789999999999999999999999999999999865 2356799998754 35899999999999998766784 4
Q ss_pred cc-ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCCcc--CcHHHHHHcCC--CCCCceEEEeec
Q 022137 116 KS-KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG--AGAFHMIKEGA--LGDSEAIFGMHI 187 (302)
Q Consensus 116 ~~-~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~--~G~~~~~~~~~--~~~~d~~~~~~~ 187 (302)
.+ .+||++|||| |||++++++.+++.|++.+..++++|+|+|+++||++ .|++.+++... ...+|+++..++
T Consensus 81 ~~~~~dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~~~G~~~~~~~~~~~~~~~d~~i~~ep 160 (370)
T TIGR01246 81 EPVERDGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLLITSDEEGTAIDGTKKVVETLMARDELIDYCIVGEP 160 (370)
T ss_pred CcEEECCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCCcCHHHHHHHHHhcCCCCCEEEEcCC
Confidence 43 5689999998 5899999999999998887778899999999999943 69988765321 124788776544
Q ss_pred cCCCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhc-CCCCCCeeEEEEEEecCC
Q 022137 188 DVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISRE-ADPLQSLVLSVTYVRGGT 266 (302)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~-~~~~~~~~~~~~~i~gg~ 266 (302)
....+.+. .+..+++|..+++++++|+++|++.|+.|.||+..+++++..|++..... ...+.+.+++++.|+||.
T Consensus 161 ~~~~~~~~---~i~~~~~G~~~~~v~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~t~~i~~i~~g~ 237 (370)
T TIGR01246 161 SSVKKLGD---VIKNGRRGSITGNLTIKGIQGHVAYPHLANNPIHKAAPALAELTAIKWDEGNEFFPPTSLQITNIHAGT 237 (370)
T ss_pred CCcccCCc---eEEEeeeEEEEEEEEEEccCcccCCcccCCCHHHHHHHHHHHHhhhhhccCCccCCCCceEeeeeecCC
Confidence 32212222 13445689999999999999999999999999999999999998764322 122456799999999986
Q ss_pred -cCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 267 -AFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 267 -~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
..|+||++|++.+|+|++|.++.+++.+.|+++++
T Consensus 238 ~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 273 (370)
T TIGR01246 238 GANNVIPGELYVQFNLRFSTEVSDEILKQRVEAILD 273 (370)
T ss_pred CCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 78999999999999999999999999999998875
No 22
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=100.00 E-value=1.3e-41 Score=314.83 Aligned_cols=249 Identities=19% Similarity=0.220 Sum_probs=201.3
Q ss_pred HHHHHHhCCCCCcchHHHHHHHHHHHHhcCCC-eeeccCCceEEEEecCCCCcEEEEEEecccCCCCC--CCCCccc---
Q 022137 43 VRRQIHENPELLFEEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQE--LVEWEHK--- 116 (302)
Q Consensus 43 ~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~-~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~--~~~w~~~--- 116 (302)
++++|++|||++++|.++++||.++|+++|++ .+....+.|+++.++++++|+|+|+|||||||.++ ...|.++
T Consensus 1 ll~~Lv~ipS~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~~nvva~~~~~~~~~l~l~gH~DtVp~~~~~~~~W~~~p~~ 80 (373)
T TIGR01900 1 LLQQIMDIFSPSDHEGPIADEIEAALNNLELEGLEVFRFGDNVLARTDFGKASRVILAGHIDTVPIADNFPPKWLEPGDS 80 (373)
T ss_pred ChHHHhCCCCCCchHHHHHHHHHHHHhhccccCceEEEECCEEEEecCCCCCCeEEEeCccccccCCCCChhhhccCccc
Confidence 46889999999999999999999999999654 22222345999998654468999999999999864 2357432
Q ss_pred ---------cccCCceecCC---CcHHHHHHHHHHHHHHh--cCCCCCceEEEEEeecCCcc---CcHHHHHHcCC-CCC
Q 022137 117 ---------SKIDGKMHACG---HDVHTTMLLGAAKLIHQ--RKDKLKGTVRILFQPAEEGG---AGAFHMIKEGA-LGD 178 (302)
Q Consensus 117 ---------~~~~g~l~g~G---~kg~~a~~l~a~~~l~~--~~~~~~~~i~~~~~~~EEg~---~G~~~~~~~~~-~~~ 178 (302)
..+||++|||| |||+++++|+|+++|++ .+..++++|.|+|+++||.+ .|+++++++.. +..
T Consensus 81 ~~~~~~~~~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~~~~~~i~~~~~~dEE~~~~~~G~~~~~~~~~~~~~ 160 (373)
T TIGR01900 81 LIREEIAHAHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPETELKHDLTLIAYDCEEVAAEKNGLGHIRDAHPDWLA 160 (373)
T ss_pred ccccccccccccCCEEEecCchhhhHHHHHHHHHHHHHhhhccccCCCCCEEEEEEecccccCCCCCHHHHHHhCccccc
Confidence 35689999999 59999999999999964 35567899999999999942 59999988642 224
Q ss_pred CceEEEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhcCC--C-CCCe
Q 022137 179 SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREAD--P-LQSL 255 (302)
Q Consensus 179 ~d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~~~--~-~~~~ 255 (302)
.|++++.+ |++. .+..+++|..+++|+++|+++|++.|+.|.||+..+++++.+|+++...... . ....
T Consensus 161 ~d~~iv~E-----pt~~---~i~~g~~G~~~~~i~v~G~~~H~s~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~ 232 (373)
T TIGR01900 161 ADFAIIGE-----PTGG---GIEAGCNGNIRFDVTAHGVAAHSARAWLGDNAIHKAADIINKLAAYEAAEVNIDGLDYRE 232 (373)
T ss_pred CCEEEEEC-----CCCC---cccccceeeEEEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHHhhcccccccCCcccc
Confidence 67666543 4443 2356789999999999999999999999999999999999999886432211 1 1236
Q ss_pred eEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHh
Q 022137 256 VLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEF 299 (302)
Q Consensus 256 ~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~ 299 (302)
++|++.|+||.+.|+||++|++.+|+|+.|+++.+++.++|+++
T Consensus 233 t~~v~~I~GG~~~nvVP~~a~~~~diR~~p~~~~e~~~~~i~~~ 276 (373)
T TIGR01900 233 GLNATFCEGGKANNVIPDEARMHLNFRFAPDKDLAEAKALMMGA 276 (373)
T ss_pred eEEEEEEeCCCCCcccCCeEEEEEEEecCCCcCHHHHHHHHHhh
Confidence 89999999999999999999999999999999999999998654
No 23
>PRK08201 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-41 Score=321.11 Aligned_cols=272 Identities=17% Similarity=0.217 Sum_probs=217.0
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHhCCCCCc------chHHHHHHHHHHHHhcCCC-eee--ccCCceEEEEecCC-CCcE
Q 022137 26 TNQVMISAQQDKDWLVSVRRQIHENPELLF------EEHNTSALIRRELDKLGIP-YAY--PVAKTGIVAQIGSG-SRPV 95 (302)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~l~~ips~~~------~E~~~a~~l~~~l~~~g~~-~~~--~~~~~nvia~~~~~-~~~~ 95 (302)
.+++.++++++++++++++++|++|||+++ +|.++++||.++|+++|++ ++. ..+++|+++.+.++ ++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~l~~LV~i~Svs~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~~~~~~~~~ 81 (456)
T PRK08201 2 MQQVEAYLRERREAHLEELKEFLRIPSISALSEHKEDVRKAAEWLAGALEKAGLEHVEIMETAGHPIVYADWLHAPGKPT 81 (456)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCeEEEEecCCCCEEEEEecCCCCCCE
Confidence 468888999999999999999999999995 4678999999999999997 433 23567899988543 3589
Q ss_pred EEEEEecccCCCCCCCCCcccc----ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcH
Q 022137 96 VVLRADMDALPLQELVEWEHKS----KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGA 167 (302)
Q Consensus 96 i~l~~H~DtVp~~~~~~w~~~~----~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~ 167 (302)
|+|+||+||||+++.+.|.++| .+||++|||| |||+++++|+|+++|++.+..++++|.|++++||| |+.|+
T Consensus 82 lll~gH~DvVp~~~~~~W~~dPf~~~~~~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~ 161 (456)
T PRK08201 82 VLIYGHYDVQPVDPLNLWETPPFEPTIRDGKLYARGASDDKGQVFMHLKAVEALLKVEGTLPVNVKFCIEGEEEIGSPNL 161 (456)
T ss_pred EEEEeccCCcCCCchhcccCCCCceEeECCEEEEEecccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccCCccH
Confidence 9999999999998766785442 5689999999 69999999999999987666778899999999999 67888
Q ss_pred HHHHHcCC--CCCCceEEEeeccCCCCCcceeeecccccceeeEEEEEEEeccc--CCCCCCC-CCCHHHHHHHHHHHHH
Q 022137 168 FHMIKEGA--LGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGG--HAAMPHS-TIDPILTASSVILALQ 242 (302)
Q Consensus 168 ~~~~~~~~--~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~--Ha~~p~~-g~Nai~~~~~~i~~l~ 242 (302)
.+++++.. + ..|++++.++....+... .++.+++|..+++|+|+|+++ ||+.|.. +.||+..++++++.|+
T Consensus 162 ~~~l~~~~~~~-~~d~~ii~e~~~~~~~~~---~i~~g~kG~~~~~l~v~G~~~~~Hs~~~~~~~~nAi~~~~~~l~~l~ 237 (456)
T PRK08201 162 DSFVEEEKDKL-AADVVLISDTTLLGPGKP---AICYGLRGLAALEIDVRGAKGDLHSGLYGGAVPNALHALVQLLASLH 237 (456)
T ss_pred HHHHHhhHHhc-cCCEEEEeCCCcCCCCCE---EEEEecCCeEEEEEEEEeCCCCCccccccCcCCCHHHHHHHHHHhcC
Confidence 88887532 2 357777654322111111 245678999999999999998 9996654 5799999999999997
Q ss_pred Hhhhhc-----------------------------------CC-CC------------CCeeEEEEEEecCC----cCcc
Q 022137 243 QLISRE-----------------------------------AD-PL------------QSLVLSVTYVRGGT----AFNI 270 (302)
Q Consensus 243 ~~~~~~-----------------------------------~~-~~------------~~~~~~~~~i~gg~----~~n~ 270 (302)
++..+. .. .+ ...|+|++.|+||. +.|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~~~Nv 317 (456)
T PRK08201 238 DEHGTVAVEGFYDGVRPLTPEEREEFAALGFDEEKLKRELGVDELFGEEGYTALERTWARPTLELNGVYGGFQGEGTKTV 317 (456)
T ss_pred CCCCCEecCCcccCCCCCCHHHHHHHHhCCCCHHHHHhhcCCccccCCcchHHHHHHHhCCcEEEEeeecCCCCCCCceE
Confidence 532100 00 00 13589999998875 3799
Q ss_pred cCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 271 IPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 271 iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
||++|++.+|+|+.|+++.+++.++|+++++
T Consensus 318 VP~~a~~~~diR~~p~~~~e~v~~~i~~~l~ 348 (456)
T PRK08201 318 IPAEAHAKITCRLVPDQDPQEILDLIEAHLQ 348 (456)
T ss_pred ECcceEEEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999998875
No 24
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=100.00 E-value=3.9e-41 Score=314.70 Aligned_cols=261 Identities=19% Similarity=0.232 Sum_probs=213.4
Q ss_pred HHHHHHHHHHHHhCCCCCcc--hHHHHHHHHHHHHhcCCCeee---ccCCceEEEEecCC-C-CcEEEEEEecccCCCCC
Q 022137 37 KDWLVSVRRQIHENPELLFE--EHNTSALIRRELDKLGIPYAY---PVAKTGIVAQIGSG-S-RPVVVLRADMDALPLQE 109 (302)
Q Consensus 37 ~~~~~~~~~~l~~ips~~~~--E~~~a~~l~~~l~~~g~~~~~---~~~~~nvia~~~~~-~-~~~i~l~~H~DtVp~~~ 109 (302)
.+++++++++|++|||+++. |.++++||.++|+++|++++. ..++.|+++.++++ + .|+|+|+|||||||.++
T Consensus 8 ~~~~~~~l~~lv~ipS~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~g~~~l~~~~~g~~~~~~~i~l~~H~DvVp~~~ 87 (400)
T TIGR01880 8 EDIAVTRFREYLRINTVQPNPDYAACVDFLIKQADELGLARKTIEFVPGKPVVVLTWPGSNPELPSILLNSHTDVVPVFR 87 (400)
T ss_pred hHHHHHHHHHHhccCccCCCccHHHHHHHHHHHHHhCCCceeEEEecCCceeEEEEEecCCCCCCeEEEEcccccCCCCc
Confidence 47788999999999999764 689999999999999999764 23688999999553 3 38999999999999875
Q ss_pred CCCC---cccc--ccCCceecCCC---cHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-cc-CcHHHHHHcCCCCCC
Q 022137 110 LVEW---EHKS--KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GG-AGAFHMIKEGALGDS 179 (302)
Q Consensus 110 ~~~w---~~~~--~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~-~G~~~~~~~~~~~~~ 179 (302)
..| ||.+ ++||++||||+ |++++++|+|++.|++.+..++++|.|+|+++|| ++ .|++++++++.+.+.
T Consensus 88 -~~W~~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~~~~v~l~~~~dEE~g~~~G~~~~~~~~~~~~~ 166 (400)
T TIGR01880 88 -EHWTHPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKFKRTIHISFVPDEEIGGHDGMEKFAKTDEFKAL 166 (400)
T ss_pred -ccCccCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCCCceEEEEEeCCcccCcHhHHHHHHHhhhccCC
Confidence 356 4543 25899999994 8999999999999999887889999999999999 44 599999987666666
Q ss_pred ceEEEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhh------c---CC
Q 022137 180 EAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISR------E---AD 250 (302)
Q Consensus 180 d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~------~---~~ 250 (302)
|..++++.....|++. ..++.+++|..+++|+++|+++||+.|. +.||+..+++++..|+++... . ..
T Consensus 167 ~~~~~~d~g~~~~~~~--~~i~~~~kG~~~~~l~v~G~~~Hs~~~~-~~nai~~l~~~i~~l~~~~~~~~~~~~~~~~~~ 243 (400)
T TIGR01880 167 NLGFALDEGLASPDDV--YRVFYAERVPWWVVVTAPGNPGHGSKLM-ENTAMEKLEKSVESIRRFRESQFQLLQSNPDLA 243 (400)
T ss_pred ceEEEEcCCCcccccc--cceeEEeeEEEEEEEEEecCCCCCCCCC-CCCHHHHHHHHHHHHHHhhHHHHHHHhcCcccc
Confidence 7666664322234442 2345678999999999999999999864 479999999999988765311 0 11
Q ss_pred CCCCeeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 251 PLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 251 ~~~~~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
....+++|++.|+||.+.|+||++|++.+|+|+.|.++.+++.++|+++++
T Consensus 244 ~~~~~t~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~~~~~i~~~i~ 294 (400)
T TIGR01880 244 IGDVTSVNLTKLKGGVQSNVIPSEAEAGFDIRLAPSVDFEEMENRLDEWCA 294 (400)
T ss_pred ccccceeecceeccCCcCCcCCCccEEEEEEeeCCCCCHHHHHHHHHHHHh
Confidence 112479999999999999999999999999999999999999999999875
No 25
>PRK09133 hypothetical protein; Provisional
Probab=100.00 E-value=6.1e-41 Score=319.55 Aligned_cols=260 Identities=17% Similarity=0.205 Sum_probs=211.7
Q ss_pred hHHHHHHHHHHHHhCCCCC--cchHHHHHHHHHHHHhcCCCee---e---ccCCceEEEEecCC-CCcEEEEEEecccCC
Q 022137 36 DKDWLVSVRRQIHENPELL--FEEHNTSALIRRELDKLGIPYA---Y---PVAKTGIVAQIGSG-SRPVVVLRADMDALP 106 (302)
Q Consensus 36 ~~~~~~~~~~~l~~ips~~--~~E~~~a~~l~~~l~~~g~~~~---~---~~~~~nvia~~~~~-~~~~i~l~~H~DtVp 106 (302)
+++++++++++|++|||++ ++|.++++||.++|+++|++++ . .+.++|+++.+++. ++|+|+|+|||||||
T Consensus 35 ~~~~~~~~l~~Lv~i~S~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~nli~~~~g~~~~~~lll~~H~DtVp 114 (472)
T PRK09133 35 DQQAARDLYKELIEINTTASTGSTTPAAEAMAARLKAAGFADADIEVTGPYPRKGNLVARLRGTDPKKPILLLAHMDVVE 114 (472)
T ss_pred hHHHHHHHHHHHhccCCCCCCcchHHHHHHHHHHHHHcCCCceEEEeccCCCCceeEEEEecCCCCCCcEEEEeecccCC
Confidence 4677899999999999998 6789999999999999999863 2 23578999999654 358899999999999
Q ss_pred CCCCCCCcccc----ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC--ccCcHHHHHHcCC-C
Q 022137 107 LQELVEWEHKS----KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE--GGAGAFHMIKEGA-L 176 (302)
Q Consensus 107 ~~~~~~w~~~~----~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE--g~~G~~~~~~~~~-~ 176 (302)
.++. .|.+++ .+||++|||| |||+++++|++++.|++.+..++++|.|+|++||| |+.|++++++++. .
T Consensus 115 ~~~~-~W~~dPf~~~~~dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~g~~G~~~l~~~~~~~ 193 (472)
T PRK09133 115 AKRE-DWTRDPFKLVEENGYFYGRGTSDDKADAAIWVATLIRLKREGFKPKRDIILALTGDEEGTPMNGVAWLAENHRDL 193 (472)
T ss_pred CChh-cCCCCCCcceEeCCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCccchHHHHHHHHhhc
Confidence 9653 585443 4689999999 59999999999999998887889999999999999 4589999987643 1
Q ss_pred CCCceEEEeeccC------CCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhc--
Q 022137 177 GDSEAIFGMHIDV------GIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISRE-- 248 (302)
Q Consensus 177 ~~~d~~~~~~~~~------~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~-- 248 (302)
-+.|+++. ++.. ++|+. ..+..+++|..+++|+++|+++||+.|+ +.||+..+++++..|+++..+.
T Consensus 194 ~~~~~~i~-e~~~~~~~~~gept~---~~i~~g~kG~~~~~i~v~G~~~Hss~p~-~~nAi~~l~~~l~~l~~~~~~~~~ 268 (472)
T PRK09133 194 IDAEFALN-EGGGGTLDEDGKPVL---LTVQAGEKTYADFRLEVTNPGGHSSRPT-KDNAIYRLAAALSRLAAYRFPVML 268 (472)
T ss_pred cCeEEEEE-CCCccccCCCCCceE---EEeeeecceeEEEEEEEecCCCCCCCCC-CCChHHHHHHHHHHHhhCCCCCcc
Confidence 13566665 4322 22322 2345678999999999999999999996 5999999999999997642100
Q ss_pred ----------------------------------------CCC----CCCeeEEEEEEecCCcCcccCCeEEEEEEEecC
Q 022137 249 ----------------------------------------ADP----LQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSL 284 (302)
Q Consensus 249 ----------------------------------------~~~----~~~~~~~~~~i~gg~~~n~iP~~~~~~~diR~~ 284 (302)
.++ ...+++|++.|+||.+.|+||++|++.+|+|++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gG~~~NvVP~~a~~~lDiR~~ 348 (472)
T PRK09133 269 NDVTRAYFKQSAAIETGPLAAAMRAFAANPADEAAIALLSADPSYNAMLRTTCVATMLEGGHAENALPQRATANVNCRIF 348 (472)
T ss_pred CCccHHHHHHHHHhCCchHHHHHHHHhcCcchHHHHHHHhcCcchhheeeeeEEeeEEecCCcCccCCCceEEEEEEEeC
Confidence 000 134799999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHhhh
Q 022137 285 TTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 285 ~~~~~~~v~~~i~~~~~ 301 (302)
|+++.+++.++|+++++
T Consensus 349 p~~~~e~v~~~I~~~i~ 365 (472)
T PRK09133 349 PGDTIEAVRATLKQVVA 365 (472)
T ss_pred CchhHHHHHHHHHHHhc
Confidence 99999999999999875
No 26
>PRK06446 hypothetical protein; Provisional
Probab=100.00 E-value=5.9e-41 Score=316.61 Aligned_cols=260 Identities=16% Similarity=0.201 Sum_probs=208.7
Q ss_pred HHHHHHHHHHHhCCCCCcc-h--HHHHHHHHHHHHhcCCCeeec--cCCceEEEEecCCCCcEEEEEEecccCCCCCCCC
Q 022137 38 DWLVSVRRQIHENPELLFE-E--HNTSALIRRELDKLGIPYAYP--VAKTGIVAQIGSGSRPVVVLRADMDALPLQELVE 112 (302)
Q Consensus 38 ~~~~~~~~~l~~ips~~~~-E--~~~a~~l~~~l~~~g~~~~~~--~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~ 112 (302)
.++++++++|++|||++++ | .++++||.++|+++|++++.. .+++|++++++++.+|+|+|+||+||||.++.+.
T Consensus 2 ~~~~~~l~eLV~i~S~s~~~~~~~~~a~~l~~~l~~~G~~ve~~~~~~~~~lia~~~~~~~~~vll~gH~DvVp~~~~~~ 81 (436)
T PRK06446 2 DEELYTLIEFLKKPSISATGEGIEETANYLKDTMEKLGIKANIERTKGHPVVYGEINVGAKKTLLIYNHYDVQPVDPLSE 81 (436)
T ss_pred hhHHHHHHHHhCCCCCCCCcHhHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCEEEEEecccCCCCCcccc
Confidence 4678899999999999964 3 799999999999999998653 3578999999654458999999999999977667
Q ss_pred Ccccc----ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCC-CCCCceEE
Q 022137 113 WEHKS----KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGA-LGDSEAIF 183 (302)
Q Consensus 113 w~~~~----~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~-~~~~d~~~ 183 (302)
|.+++ .+||++|||| |||+++++|.|++.|++.+ .++.+|.|+|++||| |+.|+++++++.. .-+.|+++
T Consensus 82 W~~~Pf~~~~~dg~lyGRGa~DmKgglaa~l~A~~~l~~~~-~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~vi 160 (436)
T PRK06446 82 WKRDPFSATIENGRIYARGASDNKGTLMARLFAIKHLIDKH-KLNVNVKFLYEGEEEIGSPNLEDFIEKNKNKLKADSVI 160 (436)
T ss_pred ccCCCCceEEECCEEEEEeccCCcHHHHHHHHHHHHHHHcC-CCCCCEEEEEEcccccCCHhHHHHHHHHHHHhCCCEEE
Confidence 85432 5699999999 6999999999999987654 578899999999999 7788888887632 12367777
Q ss_pred EeeccCCCCCcceeeecccccceeeEEEEEEEe--cccCCCCCCCCCCHHHHHHHHHHHHHHhhh---------------
Q 022137 184 GMHIDVGIPTGSIASISGPHLAATSVFNVKVEG--RGGHAAMPHSTIDPILTASSVILALQQLIS--------------- 246 (302)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G--~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~--------------- 246 (302)
+. +....+.+. .....+++|..|++++++| +++||+.|..|.||+..+++++.+|.+...
T Consensus 161 ~E-~~~~~~~~~--~~i~~~~kG~~~~~l~v~G~~~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 237 (436)
T PRK06446 161 ME-GAGLDPKGR--PQIVLGVKGLLYVELVLRTGTKDLHSSNAPIVRNPAWDLVKLLSTLVDGEGRVLIPGFYDDVRELT 237 (436)
T ss_pred EC-CCCccCCCC--eEEEEecCeEEEEEEEEEeCCCCCCCCCCccCCCHHHHHHHHHHhhCCCCCCEEccchhcCCCCCC
Confidence 52 221112222 1234667999999999999 999999999999999999999999975420
Q ss_pred -------hcC--------------------------CCCCCeeEEEEEEecC----CcCcccCCeEEEEEEEecCChhhH
Q 022137 247 -------REA--------------------------DPLQSLVLSVTYVRGG----TAFNIIPPFVEFGGTLRSLTTEGL 289 (302)
Q Consensus 247 -------~~~--------------------------~~~~~~~~~~~~i~gg----~~~n~iP~~~~~~~diR~~~~~~~ 289 (302)
... .....+++|++.|.|| .+.|+||++|++.+|+|++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~nv~~i~~g~~~~~~~nvvP~~a~~~~d~R~~p~~~~ 317 (436)
T PRK06446 238 EEERELLKKYDIDVEELRKALGFKELKYSDREKIAEALLTEPTCNIDGFYSGYTGKGSKTIVPSRAFAKLDFRLVPNQDP 317 (436)
T ss_pred HHHHHHHHhCCCCHHHHHHHhCCccccCCCcccHHHHHHhCCcEEEeeeeccccCCCCCcEecCceEEEEEEEcCCCCCH
Confidence 000 0112478999999887 467999999999999999999999
Q ss_pred HHHHHHHHHhhh
Q 022137 290 YQLQKRLKEFDR 301 (302)
Q Consensus 290 ~~v~~~i~~~~~ 301 (302)
+++.++|+++++
T Consensus 318 ~~v~~~l~~~~~ 329 (436)
T PRK06446 318 YKIFELLKKHLQ 329 (436)
T ss_pred HHHHHHHHHHHH
Confidence 999999998875
No 27
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=3e-40 Score=303.64 Aligned_cols=249 Identities=18% Similarity=0.216 Sum_probs=206.9
Q ss_pred hHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhc-CCCeeeccCCceEEEEecCCCCcEEEEEEecccCCCCCCCCCc
Q 022137 36 DKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKL-GIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWE 114 (302)
Q Consensus 36 ~~~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~-g~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~w~ 114 (302)
..+++++++++|+++||++++|.++++||.++|+++ |+++.. .++|++++++++.+++|+|+||+||||..+ .++
T Consensus 5 ~~~~~~~~l~~li~ips~s~~e~~~~~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~i~l~~H~Dtvp~~~--~~~ 80 (352)
T PRK13007 5 LAADLAELTAALVDIPSVSGDEKALADAVEAALRALPHLEVIR--HGNSVVARTDLGRPSRVVLAGHLDTVPVAD--NLP 80 (352)
T ss_pred hHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHhCcCceEEe--cCCeEEEEccCCCCCeEEEEccccccCCCC--CCC
Confidence 347899999999999999999999999999999996 887754 357999999655456899999999999875 344
Q ss_pred cccccCCceecCCC---cHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCCc-c--CcHHHHHHcCC-CCCCceEEEeec
Q 022137 115 HKSKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG-G--AGAFHMIKEGA-LGDSEAIFGMHI 187 (302)
Q Consensus 115 ~~~~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg-~--~G~~~~~~~~~-~~~~d~~~~~~~ 187 (302)
+. .+||++||||+ |+++|++|++++.|. .++++|.++|+++||. + .|++.++.... +...|+++..+
T Consensus 81 ~~-~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~----~~~~~i~~~~~~~EE~~~~~~G~~~~~~~~~~~~~~d~~i~~e- 154 (352)
T PRK13007 81 SR-REGDRLYGCGASDMKSGLAVMLHLAATLA----EPAHDLTLVFYDCEEVEAEANGLGRLAREHPEWLAGDFAILLE- 154 (352)
T ss_pred cc-eeCCEEEccCcccccHHHHHHHHHHHHhh----ccCCCeEEEEEecccccCCcccHHHHHHhcccccCCCEEEEec-
Confidence 43 57899999994 899999999999994 4678999999999994 3 58888887532 33478877764
Q ss_pred cCCCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCC---CCeeEEEEEEec
Q 022137 188 DVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPL---QSLVLSVTYVRG 264 (302)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~~~~~---~~~~~~~~~i~g 264 (302)
|++. .+..+++|..+++|+++|+++|||.|+.|+||+..+++++.+++++..+..... ...++|++.|+|
T Consensus 155 ----p~~~---~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~i~g 227 (352)
T PRK13007 155 ----PTDG---VIEAGCQGTLRVTVTFHGRRAHSARSWLGENAIHKAAPVLARLAAYEPREVVVDGLTYREGLNAVRISG 227 (352)
T ss_pred ----CCCC---ceEeeccceEEEEEEEEecccccCCCccCcCHHHHHHHHHHHHHHhcccccccCCCCccceeEeEeEec
Confidence 3332 123567899999999999999999999999999999999999988754321111 135899999999
Q ss_pred CCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 265 GTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 265 g~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
|.+.|+||++|++.+|+|++|.++.+++.++|+++++
T Consensus 228 G~~~nviP~~a~~~~diR~~p~~~~~~v~~~i~~~~~ 264 (352)
T PRK13007 228 GVAGNVIPDECVVNVNYRFAPDRSLEEALAHVREVFD 264 (352)
T ss_pred CCcCccCCCeEEEEEEEeeCCCCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999998875
No 28
>PRK07907 hypothetical protein; Provisional
Probab=100.00 E-value=4.2e-40 Score=311.98 Aligned_cols=270 Identities=15% Similarity=0.169 Sum_probs=215.7
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHhCCCCCcc------hHHHHHHHHHHHHhcCC-Ceeec--cCCceEEEEecCC-CCcE
Q 022137 26 TNQVMISAQQDKDWLVSVRRQIHENPELLFE------EHNTSALIRRELDKLGI-PYAYP--VAKTGIVAQIGSG-SRPV 95 (302)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~l~~ips~~~~------E~~~a~~l~~~l~~~g~-~~~~~--~~~~nvia~~~~~-~~~~ 95 (302)
.+++.++++++++++++++++|++|||++++ |.++++||.++|+++|+ +++.. ++++|+++.++++ .+|+
T Consensus 6 ~~~~~~~i~~~~~~~~~ll~~LV~ipS~s~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~nl~a~~~~~~~~~~ 85 (449)
T PRK07907 6 ADDLRARVAELLPRVRADLEELVRIPSVAADPFRREEVARSAEWVADLLREAGFDDVRVVSADGAPAVIGTRPAPPGAPT 85 (449)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccchhhHHHHHHHHHHHHHHcCCceEEEEecCCCCEEEEEecCCCCCCE
Confidence 4568889999999999999999999999963 68999999999999998 66653 4688999998654 3589
Q ss_pred EEEEEecccCCCCCCCCCcccc----ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcH
Q 022137 96 VVLRADMDALPLQELVEWEHKS----KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGA 167 (302)
Q Consensus 96 i~l~~H~DtVp~~~~~~w~~~~----~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~ 167 (302)
|+|+||+||||+++...|.++| ++||+||||| |||+++++|+|+++| +..++++|.|++++||| |+.|+
T Consensus 86 lll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l---~~~~~~~i~~~~~~dEE~g~~g~ 162 (449)
T PRK07907 86 VLLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGRGAADDKGGIAMHLAALRAL---GGDLPVGVTVFVEGEEEMGSPSL 162 (449)
T ss_pred EEEEcccCCCCCCCccccCCCCceeEEECCEEEECCccCCcHHHHHHHHHHHHh---ccCCCCcEEEEEEcCcccCCccH
Confidence 9999999999998766785443 4699999999 599999999999999 33567899999999999 67899
Q ss_pred HHHHHcCC-CCCCceEEEeeccCCCCCcceeeecccccceeeEEEEEEE--ecccCCCC-CCCCCCHHHHHHHHHHHHHH
Q 022137 168 FHMIKEGA-LGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVE--GRGGHAAM-PHSTIDPILTASSVILALQQ 243 (302)
Q Consensus 168 ~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~--G~~~Ha~~-p~~g~Nai~~~~~~i~~l~~ 243 (302)
++++++.. ..+.|++++.++... ..+.- ....+++|..+++++++ |+++||+. +..+.||+..+++++.+|.+
T Consensus 163 ~~~l~~~~~~~~~d~~iv~E~~~~-~~~~p--~i~~~~kG~~~~~l~v~~~G~~~Hss~~~~~~~nAi~~~~~~l~~l~~ 239 (449)
T PRK07907 163 ERLLAEHPDLLAADVIVIADSGNW-SVGVP--ALTTSLRGNADVVVTVRTLEHAVHSGQFGGAAPDALTALVRLLATLHD 239 (449)
T ss_pred HHHHHhchHhhcCCEEEEecCCcC-CCCCe--EEEEecCCcEEEEEEEEECCCCCCCccccccCCCHHHHHHHHHHhhCC
Confidence 99988642 123577776543211 01100 12456899999999999 89999997 46689999999999999976
Q ss_pred hhhhc-------CCC---------------------------------CCCeeEEEEEEec---CCcCcccCCeEEEEEE
Q 022137 244 LISRE-------ADP---------------------------------LQSLVLSVTYVRG---GTAFNIIPPFVEFGGT 280 (302)
Q Consensus 244 ~~~~~-------~~~---------------------------------~~~~~~~~~~i~g---g~~~n~iP~~~~~~~d 280 (302)
...+. ..+ ....+++++.|++ |.+.|+||++|++.+|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~~~~~g~~~nvIP~~a~~~~d 319 (449)
T PRK07907 240 EDGNVAVDGLDATEPWLGVDYDEERFRADAGVLDGVELIGTGSVADRLWAKPAITVIGIDAPPVAGASNALPPSARARLS 319 (449)
T ss_pred CCCCEeCCCccCCCCcccccccHHHHHHHhhhhhcccccCCChHHHHhhhcCcEEEEeeecCCCCCCCCEecCceEEEEE
Confidence 42110 000 1245889999986 4688999999999999
Q ss_pred EecCChhhHHHHHHHHHHhhh
Q 022137 281 LRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 281 iR~~~~~~~~~v~~~i~~~~~ 301 (302)
+|+.|+++.+++.+.|+++++
T Consensus 320 iR~~p~~~~e~v~~~l~~~l~ 340 (449)
T PRK07907 320 LRVAPGQDAAEAQDALVAHLE 340 (449)
T ss_pred EEcCCCCCHHHHHHHHHHHHH
Confidence 999999999999999998865
No 29
>PRK07473 carboxypeptidase; Provisional
Probab=100.00 E-value=2.3e-39 Score=300.09 Aligned_cols=250 Identities=17% Similarity=0.173 Sum_probs=206.0
Q ss_pred HHHHHHHHHHHHhCCCCCcchH---HHHHHHHHHHHhcCCCeeecc---C-CceEEEEecCC--CCcEEEEEEecccCCC
Q 022137 37 KDWLVSVRRQIHENPELLFEEH---NTSALIRRELDKLGIPYAYPV---A-KTGIVAQIGSG--SRPVVVLRADMDALPL 107 (302)
Q Consensus 37 ~~~~~~~~~~l~~ips~~~~E~---~~a~~l~~~l~~~g~~~~~~~---~-~~nvia~~~~~--~~~~i~l~~H~DtVp~ 107 (302)
.+++++++++|++|||++++|. ++++|+.++|+++|++++... + .+|+++.+++. .+|+|+|+||+||||+
T Consensus 10 ~~~~~~~l~~Lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~gH~DtV~~ 89 (376)
T PRK07473 10 SEAMLAGLRPWVECESPTWDAAAVNRMLDLAARDMAIMGATIERIPGRQGFGDCVRARFPHPRQGEPGILIAGHMDTVHP 89 (376)
T ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCeEEEEeCCCCCCCCeEEEEecCCCCCC
Confidence 6788999999999999999885 777899999999999987632 2 35899998642 3589999999999975
Q ss_pred C-CCCCCccccccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCCCCCCceE
Q 022137 108 Q-ELVEWEHKSKIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAI 182 (302)
Q Consensus 108 ~-~~~~w~~~~~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~ 182 (302)
. .++.+||. .+||++|||| |||+++++|+|+++|++.+..++.+|.|+|++||| |+.|++.+++++.. ..|++
T Consensus 90 ~~~~~~~p~~-~~~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~g~~~~~~~~~~-~~d~~ 167 (376)
T PRK07473 90 VGTLEKLPWR-REGNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPITVLFTPDEEVGTPSTRDLIEAEAA-RNKYV 167 (376)
T ss_pred CCCccCCCeE-EECCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEeCCcccCCccHHHHHHHhhc-cCCEE
Confidence 3 33334664 6789999999 79999999999999998877777899999999999 77899999987543 46777
Q ss_pred EEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCC-CCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEE
Q 022137 183 FGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA-MPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTY 261 (302)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~-~p~~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 261 (302)
++.+ |++.. ..+..+++|..+++|+++|+++|++ .|+.|+||+..+++++.+|+++.. ...++|++.
T Consensus 168 iv~e-----p~~~~-~~v~~~~~G~~~~~v~~~G~~aHag~~p~~g~nAi~~~~~~i~~l~~~~~------~~~~~~vg~ 235 (376)
T PRK07473 168 LVPE-----PGRPD-NGVVTGRYAIARFNLEATGRPSHAGATLSEGRSAIREMARQILAIDAMTT------EDCTFSVGI 235 (376)
T ss_pred EEeC-----CCCCC-CCEEEECeeeEEEEEEEEeEcCCCCCCcccCcCHHHHHHHHHHHHHHhcC------CCceEeEee
Confidence 7654 33210 0123457899999999999999997 799999999999999999998742 236899999
Q ss_pred EecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhh
Q 022137 262 VRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFD 300 (302)
Q Consensus 262 i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~ 300 (302)
|+||.+.|+||++|++.+|+|....+..+++.+++.+.+
T Consensus 236 i~gg~~~n~VP~~~~~~~d~r~~~~~~~~~~~~~i~~~~ 274 (376)
T PRK07473 236 VHGGQWVNCVATTCTGEALSMAKRQADLDRGVARMLALS 274 (376)
T ss_pred EEcCCCCcCCCCceEEEEEEEeCCHhHHHHHHHHHHHhh
Confidence 999999999999999999999988888888888776543
No 30
>PRK09104 hypothetical protein; Validated
Probab=100.00 E-value=1.8e-39 Score=308.77 Aligned_cols=273 Identities=15% Similarity=0.197 Sum_probs=217.8
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHhCCCCCcch------HHHHHHHHHHHHhcCCCeee--ccCCceEEEEecCC--CCcE
Q 022137 26 TNQVMISAQQDKDWLVSVRRQIHENPELLFEE------HNTSALIRRELDKLGIPYAY--PVAKTGIVAQIGSG--SRPV 95 (302)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~l~~ips~~~~E------~~~a~~l~~~l~~~g~~~~~--~~~~~nvia~~~~~--~~~~ 95 (302)
..++.++++.+++++++++++|++|||+++++ .++++||.++|+++|++++. ..+.+|+++.+++. .+|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~L~~lv~i~Svs~~~~~~~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~l~a~~~g~~~~~~~ 84 (464)
T PRK09104 5 LDPVLDHIDANLDASLERLFALLRIPSISTDPAYAADCRKAADWLVADLASLGFEASVRDTPGHPMVVAHHEGPTGDAPH 84 (464)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCccchHHHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCCCE
Confidence 45688999999999999999999999999764 78999999999999999875 33567999999642 3589
Q ss_pred EEEEEecccCCCCCCCCCcccc----ccCC-----ceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-
Q 022137 96 VVLRADMDALPLQELVEWEHKS----KIDG-----KMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE- 162 (302)
Q Consensus 96 i~l~~H~DtVp~~~~~~w~~~~----~~~g-----~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE- 162 (302)
|+|+||+||||.++.+.|+++| .++| ++|||| |||+++++|+|+++|++++..++++|.|+|++|||
T Consensus 85 lll~gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~ 164 (464)
T PRK09104 85 VLFYGHYDVQPVDPLDLWESPPFEPRIKETPDGRKVIVARGASDDKGQLMTFVEACRAWKAVTGSLPVRVTILFEGEEES 164 (464)
T ss_pred EEEEecccCCCCCCcccCCCCCCcceEecCcCCcceEEEecccCCcHHHHHHHHHHHHHHHhcCCCCCcEEEEEECcccc
Confidence 9999999999998777896543 2343 599999 59999999999999998776788999999999999
Q ss_pred ccCcHHHHHHcCC-CCCCceEEEeeccCCCCCcceeeecccccceeeEEEEEEEe--cccCCCC-CCCCCCHHHHHHHHH
Q 022137 163 GGAGAFHMIKEGA-LGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEG--RGGHAAM-PHSTIDPILTASSVI 238 (302)
Q Consensus 163 g~~G~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G--~~~Ha~~-p~~g~Nai~~~~~~i 238 (302)
|+.|.++++.+.. ....|++++.++... .+.. ..+..+++|..+++|+++| +++||+. |+.|.||+..+++++
T Consensus 165 g~~g~~~~l~~~~~~~~~d~~iv~E~~~~--~~~~-~~i~~~~kG~~~~~l~v~g~~~~~Hss~~~~~g~nai~~~~~~l 241 (464)
T PRK09104 165 GSPSLVPFLEANAEELKADVALVCDTGMW--DRET-PAITTSLRGLVGEEVTITAADRDLHSGLFGGAAANPIRVLTRIL 241 (464)
T ss_pred CCccHHHHHHhhHHhcCCCEEEEeCCCCC--CCCC-eEEEeecCCeEEEEEEEEeCCCCccccccCCccCCHHHHHHHHH
Confidence 6788888877532 113577776542211 1111 1234678999999999999 6899995 688999999999999
Q ss_pred HHHHHhhhh----------------------cC--------------CC------------CCCeeEEEEEEecCC----
Q 022137 239 LALQQLISR----------------------EA--------------DP------------LQSLVLSVTYVRGGT---- 266 (302)
Q Consensus 239 ~~l~~~~~~----------------------~~--------------~~------------~~~~~~~~~~i~gg~---- 266 (302)
.+|.+.... .. .+ ...+++|++.|+||.
T Consensus 242 ~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~ 321 (464)
T PRK09104 242 AGLHDETGRVTLPGFYDGVEELPPEILAQWKALGFTAEAFLGPVGLSIPAGEKGRSVLEQIWSRPTCEINGIWGGYTGEG 321 (464)
T ss_pred HhccCCCCCEeCCccccCCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccCcccHHHHHHHhhCCeEEEeccccCCCCCC
Confidence 998753110 00 00 113689999999885
Q ss_pred cCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 267 AFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 267 ~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
+.|+||++|++.+|+|++|+++.+++.++|+++++
T Consensus 322 ~~nvvP~~~~~~~diR~~p~~~~~~v~~~i~~~l~ 356 (464)
T PRK09104 322 FKTVIPAEASAKVSFRLVGGQDPAKIREAFRAYVR 356 (464)
T ss_pred CccEecCceEEEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 46999999999999999999999999999999874
No 31
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=2.1e-39 Score=302.46 Aligned_cols=256 Identities=21% Similarity=0.277 Sum_probs=207.6
Q ss_pred HhhHHHHHHHHHHHHhCCCCC---cchHHHHHHHHHHHHhcCCCeeecc---C--------CceEEEEecCCCCcEEEEE
Q 022137 34 QQDKDWLVSVRRQIHENPELL---FEEHNTSALIRRELDKLGIPYAYPV---A--------KTGIVAQIGSGSRPVVVLR 99 (302)
Q Consensus 34 ~~~~~~~~~~~~~l~~ips~~---~~E~~~a~~l~~~l~~~g~~~~~~~---~--------~~nvia~~~~~~~~~i~l~ 99 (302)
+...+++++++++|++|||++ .+|.++++||.++|+++|++++... . ++|+++..++++ |+|+|+
T Consensus 2 ~~~~~~~~~~l~~lv~i~S~s~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ill~ 80 (394)
T PRK08651 2 EAMMFDIVEFLKDLIKIPTVNPPGENYEEIAEFLRDTLEELGFSTEIIEVPNEYVKKHDGPRPNLIARRGSGN-PHLHFN 80 (394)
T ss_pred chhHHHHHHHHHHHhcCCccCCCCcCHHHHHHHHHHHHHHcCCeEEEEecCccccccccCCcceEEEEeCCCC-ceEEEE
Confidence 346789999999999999988 6778999999999999999887622 1 245777665444 899999
Q ss_pred EecccCCCCCCC--CCcccc-ccCCceecCCC---cHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHH
Q 022137 100 ADMDALPLQELV--EWEHKS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIK 172 (302)
Q Consensus 100 ~H~DtVp~~~~~--~w~~~~-~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~ 172 (302)
||+||||.++.. ..||+. .+||++||||+ |++++++|++++.|++.+ +++|.|+|+++|| ++.|++++++
T Consensus 81 ~HlDtvp~~~~~~~~~Pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~---~~~v~~~~~~~EE~g~~G~~~~~~ 157 (394)
T PRK08651 81 GHYDVVPPGEGWSVNVPFEPKVKDGKVYGRGASDMKGGIAALLAAFERLDPAG---DGNIELAIVPDEETGGTGTGYLVE 157 (394)
T ss_pred eeeeeecCCCCccccCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHhcC---CCCEEEEEecCccccchhHHHHHh
Confidence 999999987531 224553 46899999994 999999999999998764 7999999999999 5689999998
Q ss_pred cCCCCCCceEEEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhcC---
Q 022137 173 EGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREA--- 249 (302)
Q Consensus 173 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~~--- 249 (302)
++.++ +|+++..+ |++.. ....+++|..+++|+++|+++|++.|+.|.||+..+++++++|++......
T Consensus 158 ~~~~~-~d~~i~~~-----~~~~~--~i~~~~~G~~~~~i~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~ 229 (394)
T PRK08651 158 EGKVT-PDYVIVGE-----PSGLD--NICIGHRGLVWGVVKVYGKQAHASTPWLGINAFEAAAKIAERLKSSLSTIKSKY 229 (394)
T ss_pred ccCCC-CCEEEEec-----CCCCC--ceEEecccEEEEEEEEEEeccccCCCccccCHHHHHHHHHHHHHHHHHhhhccc
Confidence 86543 67666543 33320 123456899999999999999999999999999999999999987543211
Q ss_pred ---C-CCCCeeEEEEE--EecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 250 ---D-PLQSLVLSVTY--VRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 250 ---~-~~~~~~~~~~~--i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
. .....+++++. |+||.+.|+||++|++.+|+|+.|..+.+++.++|+++++
T Consensus 230 ~~~~~~~~~~~~~ig~~~i~gG~~~nviP~~a~~~~diR~~~~~~~e~i~~~i~~~~~ 287 (394)
T PRK08651 230 EYDDERGAKPTVTLGGPTVEGGTKTNIVPGYCAFSIDRRLIPEETAEEVRDELEALLD 287 (394)
T ss_pred cccccccCCCceeecceeeeCCCCCCccCCEEEEEEEeeeCCCCCHHHHHHHHHHHHH
Confidence 1 12345788888 9999999999999999999999999999999999998764
No 32
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=100.00 E-value=4.3e-39 Score=295.41 Aligned_cols=237 Identities=14% Similarity=0.117 Sum_probs=197.8
Q ss_pred hHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCCCCcEEEEEEecccCCCCCCCCCcc
Q 022137 36 DKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEH 115 (302)
Q Consensus 36 ~~~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~w~~ 115 (302)
+.+++++++++|++|||++++|.++++||.++|+++|++++... .+|++. .+ +|+|+|+||+||||. |..
T Consensus 8 ~~~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~-~~~~~~--~g--~~~lll~gH~DtVp~-----~~~ 77 (346)
T PRK00466 8 VKQKAKELLLDLLSIYTPSGNETNATKFFEKISNELNLKLEILP-DSNSFI--LG--EGDILLASHVDTVPG-----YIE 77 (346)
T ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEEec-CCCcEe--cC--CCeEEEEeccccCCC-----CCC
Confidence 34688899999999999999999999999999999999887643 456653 22 368999999999994 212
Q ss_pred ccccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCCCCCCceEEEeeccCCC
Q 022137 116 KSKIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGI 191 (302)
Q Consensus 116 ~~~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~~~~ 191 (302)
...+||+||||| |||+++++|+|+++|++.+ .++.|+|++||| ++.|++++++++. .+|+++.. +
T Consensus 78 ~~~~~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~----~~i~~~~~~dEE~g~~G~~~l~~~~~--~~d~~i~~-----e 146 (346)
T PRK00466 78 PKIEGEVIYGRGAVDAKGPLISMIIAAWLLNEKG----IKVMVSGLADEESTSIGAKELVSKGF--NFKHIIVG-----E 146 (346)
T ss_pred ceeeCCEEEecCccccchHHHHHHHHHHHHHHcC----CCEEEEEEcCcccCCccHHHHHhcCC--CCCEEEEc-----C
Confidence 246789999999 6999999999999998765 358999999999 5689999998763 46777664 3
Q ss_pred CCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEEEecCCcCccc
Q 022137 192 PTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNII 271 (302)
Q Consensus 192 ~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~gg~~~n~i 271 (302)
|++.. .+..+++|..+++|+++|+++|++.|+ .||+..+++++.++.++. ......++|++.|+||.+.|+|
T Consensus 147 p~~~~--~i~~~~kG~~~~~i~v~G~~~Has~p~--~nAi~~~~~~l~~l~~~~----~~~~~~t~~~~~i~gG~~~Nvv 218 (346)
T PRK00466 147 PSNGT--DIVVEYRGSIQLDIMCEGTPEHSSSAK--SNLIVDISKKIIEVYKQP----ENYDKPSIVPTIIRAGESYNVT 218 (346)
T ss_pred CCCCC--ceEEEeeEEEEEEEEEEeeccccCCCC--cCHHHHHHHHHHHHHhcc----ccCCCCcceeeEEecCCcCccc
Confidence 55431 234568899999999999999999886 599999999999987642 2233578999999999999999
Q ss_pred CCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 272 PPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 272 P~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
|++|.+.+|+|+.|+++.+++.++|+++++
T Consensus 219 P~~a~~~~diR~~p~~~~~~v~~~i~~~~~ 248 (346)
T PRK00466 219 PAKLYLHFDVRYAINNKRDDLISEIKDKFQ 248 (346)
T ss_pred CCceEEEEEEEeCCCCCHHHHHHHHHHHHh
Confidence 999999999999999999999999998764
No 33
>PRK08737 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=3.9e-39 Score=297.09 Aligned_cols=241 Identities=20% Similarity=0.228 Sum_probs=196.3
Q ss_pred HHHHHHHHHHHHhCCCCC----cchHHHHHHHHHHHHhcCCCeeec---cCCceEEEEecCCCCcEEEEEEecccCCCCC
Q 022137 37 KDWLVSVRRQIHENPELL----FEEHNTSALIRRELDKLGIPYAYP---VAKTGIVAQIGSGSRPVVVLRADMDALPLQE 109 (302)
Q Consensus 37 ~~~~~~~~~~l~~ips~~----~~E~~~a~~l~~~l~~~g~~~~~~---~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~ 109 (302)
.+++++++++|++|||++ ++|.++++||.++|+ |++++.. .++.|+++..+ +|+|+|+||+||||.++
T Consensus 5 ~~~~~~~l~~Lv~i~s~~~~~~~~e~~~~~~l~~~l~--g~~~~~~~~~~~~~nli~~~g---~~~lll~gH~DtVp~~~ 79 (364)
T PRK08737 5 LESTLDHLQALVSFDTRNPPRAITTGGIFDYLRAQLP--GFQVEVIDHGAGAVSLYAVRG---TPKYLFNVHLDTVPDSP 79 (364)
T ss_pred HHHHHHHHHHHhCCCCcCCCCCCCcHHHHHHHHHHhC--CCEEEEecCCCCceEEEEEcC---CCeEEEEeeeCCCCCCC
Confidence 457889999999999985 357899999999997 8887653 34568988642 27899999999999864
Q ss_pred CCCCccc----cccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-cc-CcHHHHHHcCCCCCCc
Q 022137 110 LVEWEHK----SKIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GG-AGAFHMIKEGALGDSE 180 (302)
Q Consensus 110 ~~~w~~~----~~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~-~G~~~~~~~~~~~~~d 180 (302)
.|.++ ..+||+||||| |||+++++|+|++. +.++|.|+|++||| ++ .|++.+++.+. +.|
T Consensus 80 --~w~~~Pf~~~~~~g~lyGrGa~DmKg~~aa~l~a~~~-------~~~~v~~~~~~dEE~g~~~g~~~~~~~~~--~~~ 148 (364)
T PRK08737 80 --HWSADPHVMRRTDDRVIGLGVCDIKGAAAALLAAANA-------GDGDAAFLFSSDEEANDPRCVAAFLARGI--PYE 148 (364)
T ss_pred --CCCCCCCceEEECCEEEEECcccchHHHHHHHHHHHc-------cCCCEEEEEEcccccCchhhHHHHHHhCC--CCC
Confidence 57543 25689999999 59999999999863 34689999999999 55 58889988764 467
Q ss_pred eEEEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCCCC-CCCCCHHHHHHHHHHHHHHhhhhcC----CCCCCe
Q 022137 181 AIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMP-HSTIDPILTASSVILALQQLISREA----DPLQSL 255 (302)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p-~~g~Nai~~~~~~i~~l~~~~~~~~----~~~~~~ 255 (302)
+++.. +|++.. ...+++|..+++|+++|+++|+|.| +.|+|||+.+++++.++.+...... +.....
T Consensus 149 ~~iv~-----Ept~~~---~~~~~kG~~~~~v~v~Gk~aHas~p~~~G~NAI~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 220 (364)
T PRK08737 149 AVLVA-----EPTMSE---AVLAHRGISSVLMRFAGRAGHASGKQDPSASALHQAMRWGGQALDHVESLAHARFGGLTGL 220 (364)
T ss_pred EEEEc-----CCCCce---eEEecceeEEEEEEEEeeccccCCCcccCCCHHHHHHHHHHHHHHHHHhhhhhccCCCCCC
Confidence 77654 455542 3467899999999999999999988 5899999999999988765532221 122356
Q ss_pred eEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 256 VLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 256 ~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
++|++.|+||.+.|+||++|++.+|+|+.|.++.+++.++|+++++
T Consensus 221 t~~vg~i~GG~~~NvVP~~a~~~~d~R~~p~~~~e~v~~~i~~~~~ 266 (364)
T PRK08737 221 RFNIGRVEGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFAE 266 (364)
T ss_pred ceEEeeEecCCCCCcCCCceEEEEEeeeCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999987754
No 34
>PRK07906 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-39 Score=304.98 Aligned_cols=257 Identities=16% Similarity=0.235 Sum_probs=202.3
Q ss_pred HHHHHHHHhCCCCC------cchHHHHHHHHHHHHhcCCCeeec---cCCceEEEEecCC-C-CcEEEEEEecccCCCCC
Q 022137 41 VSVRRQIHENPELL------FEEHNTSALIRRELDKLGIPYAYP---VAKTGIVAQIGSG-S-RPVVVLRADMDALPLQE 109 (302)
Q Consensus 41 ~~~~~~l~~ips~~------~~E~~~a~~l~~~l~~~g~~~~~~---~~~~nvia~~~~~-~-~~~i~l~~H~DtVp~~~ 109 (302)
++++++|++|||++ ++|.++++||.++|+++|++++.. +.++|+++.+++. + .|+|+|+||+||||.++
T Consensus 2 ~~ll~~Lv~i~S~s~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nv~~~~~g~~~~~~~lll~~H~DtVp~~~ 81 (426)
T PRK07906 2 VDLCSELIRIDTTNTGDGTGKGEREAAEYVAEKLAEVGLEPTYLESAPGRANVVARLPGADPSRPALLVHGHLDVVPAEA 81 (426)
T ss_pred hHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhCCCCeEEeecCCCceEEEEEEeCCCCCCCcEEEEcccccCCCCc
Confidence 67899999999998 689999999999999999998763 3578999999653 2 47899999999999965
Q ss_pred CCCCcccc----ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCCc-c-CcHHHHHHcC--CCCC
Q 022137 110 LVEWEHKS----KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG-G-AGAFHMIKEG--ALGD 178 (302)
Q Consensus 110 ~~~w~~~~----~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg-~-~G~~~~~~~~--~~~~ 178 (302)
. .|.+++ .+||++|||| ||++++++|+++++|++.+..++++|.|+|+++||+ + .|+++++++. .+..
T Consensus 82 ~-~W~~~Pf~~~~~dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~~g~~~l~~~~~~~~~~ 160 (426)
T PRK07906 82 A-DWSVHPFSGEIRDGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLVFAFVADEEAGGTYGAHWLVDNHPELFEG 160 (426)
T ss_pred c-cCccCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEecCcccchhhhHHHHHHHHHHhccc
Confidence 3 685543 4689999999 599999999999999998888999999999999994 3 5999987753 2233
Q ss_pred CceEEEeeccC--CCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhc--------
Q 022137 179 SEAIFGMHIDV--GIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISRE-------- 248 (302)
Q Consensus 179 ~d~~~~~~~~~--~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~-------- 248 (302)
.++++...... ..+.......+..+++|..+++|+++|+++|+++|+ +.||+..+++++..|+++..+.
T Consensus 161 ~~~ii~e~~~~~~~~~~~~~~~~i~~~~kG~~~~~v~v~G~~~Hss~p~-~~nAi~~~~~~l~~l~~~~~~~~~~~~~~~ 239 (426)
T PRK07906 161 VTEAISEVGGFSLTVPGRDRLYLIETAEKGLAWMRLTARGRAGHGSMVN-DDNAVTRLAEAVARIGRHRWPLVLTPTVRA 239 (426)
T ss_pred hheEEECCCceeeccCCCccEEEEEeccceEEEEEEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHhCCCCcccCHHHHH
Confidence 34444321110 001110112345678999999999999999999996 4999999999999997542110
Q ss_pred ------------CCCC-------------------CCeeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHH
Q 022137 249 ------------ADPL-------------------QSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLK 297 (302)
Q Consensus 249 ------------~~~~-------------------~~~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~ 297 (302)
.++. ..+++|++.|+||.+.|+||++|++.+|+|++|+++ +++.+.|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~i~gG~~~NviP~~~~~~~d~R~~p~~~-~~i~~~i~ 318 (426)
T PRK07906 240 FLDGVAELTGLEFDPDDPDALLAKLGPAARMVGATLRNTANPTMLKAGYKVNVIPGTAEAVVDGRFLPGRE-EEFLATVD 318 (426)
T ss_pred HHHHhhhhcCcccCcccHHHHHHHHhhcCcchhhhhcccccceeEeccCccccCCCceEEEEEEeECCCCc-HHHHHHHH
Confidence 0000 135999999999999999999999999999999887 77888888
Q ss_pred Hhh
Q 022137 298 EFD 300 (302)
Q Consensus 298 ~~~ 300 (302)
+++
T Consensus 319 ~~~ 321 (426)
T PRK07906 319 ELL 321 (426)
T ss_pred HHh
Confidence 765
No 35
>PRK08652 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=3.4e-39 Score=295.98 Aligned_cols=241 Identities=17% Similarity=0.165 Sum_probs=199.0
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeeccC--CceEEEEecCCCCcEEEEEEecccCCCCCCCCCcc
Q 022137 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA--KTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEH 115 (302)
Q Consensus 38 ~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~~~--~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~w~~ 115 (302)
+++++++++|++|||++++|.++++||.++|+++|++++.... ..|+++ + .+|+|+|.|||||||.... +
T Consensus 2 ~~~~~~~~~lv~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~---~-~~~~i~l~~H~D~vp~~~~---~- 73 (347)
T PRK08652 2 ERAKELLKQLVKIPSPSGQEDEIALHIMEFLESLGYDVHIESDGEVINIVV---N-SKAELFVEVHYDTVPVRAE---F- 73 (347)
T ss_pred hhHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCEEEEEecCceeEEEc---C-CCCEEEEEccccccCCCCC---C-
Confidence 5678999999999999999999999999999999999876332 456655 2 3489999999999997531 1
Q ss_pred ccccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCCCCCCceEEEeeccCCC
Q 022137 116 KSKIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGI 191 (302)
Q Consensus 116 ~~~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~~~~ 191 (302)
..+||++|||| ||++++++|+|++.|++. .++++|.|+|++||| ++.|++.++++. ..|+++..+
T Consensus 74 -~~~~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~dEE~g~~G~~~~~~~~---~~d~~i~~e----- 142 (347)
T PRK08652 74 -FVDGVYVYGTGACDAKGGVAAILLALEELGKE--FEDLNVGIAFVSDEEEGGRGSALFAERY---RPKMAIVLE----- 142 (347)
T ss_pred -EEECCEEEeccchhhhHHHHHHHHHHHHHhhc--ccCCCEEEEEecCcccCChhHHHHHHhc---CCCEEEEec-----
Confidence 24689999998 699999999999999854 346799999999999 678999998763 246666553
Q ss_pred CCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEEEecCCcCccc
Q 022137 192 PTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNII 271 (302)
Q Consensus 192 ~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~gg~~~n~i 271 (302)
|++. .+..+++|..+++|+++|+++|++.|+.|.||+..+++++.+++++.......+. .+++++.|+||.+.|+|
T Consensus 143 p~~~---~i~~~~~g~~~~~i~~~G~~~H~s~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~~-~~~~~~~i~gg~~~nvi 218 (347)
T PRK08652 143 PTDL---KVAIAHYGNLEAYVEVKGKPSHGACPESGVNAIEKAFEMLEKLKELLKALGKYFD-PHIGIQEIIGGSPEYSI 218 (347)
T ss_pred CCCC---ceeeecccEEEEEEEEEeeecccCCCCcCcCHHHHHHHHHHHHHHHHHhhhcccC-CCCcceeeecCCCCCcc
Confidence 3322 2345678999999999999999999999999999999999999887543221122 35677889999999999
Q ss_pred CCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 272 PPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 272 P~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
|++|++.+|+|++|.++.+++.++|+++++
T Consensus 219 P~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 248 (347)
T PRK08652 219 PALCRLRLDARIPPEVEVEDVLDEIDPILD 248 (347)
T ss_pred CCcEEEEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999998874
No 36
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=100.00 E-value=6e-39 Score=294.65 Aligned_cols=241 Identities=14% Similarity=0.094 Sum_probs=199.2
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCCCCcEEEEEEecccCCCCCCCCCccc
Q 022137 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEHK 116 (302)
Q Consensus 37 ~~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~w~~~ 116 (302)
.+++++++++|++|||++++|.++++|+.++|+++|++++.. ..+|++++++++ +|+|+|+||+||||... |+
T Consensus 5 ~~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~n~i~~~~~~-~~~l~~~~H~DtVp~~~----p~- 77 (348)
T PRK04443 5 ALEARELLKGLVEIPSPSGEEAAAAEFLVEFMESHGREAWVD-EAGNARGPAGDG-PPLVLLLGHIDTVPGDI----PV- 77 (348)
T ss_pred hHHHHHHHHHHHcCCCCCCChHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEcCCC-CCEEEEEeeccccCCCC----Cc-
Confidence 477899999999999999999999999999999999998754 457999998544 48999999999999532 33
Q ss_pred cccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCCCCCCceEEEeeccCCCC
Q 022137 117 SKIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGIP 192 (302)
Q Consensus 117 ~~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~~~~~ 192 (302)
..+||++|||| |||+++++|.|+++| +.+++++|.|++++||| ++.|...++.++. .+|+++..+ |
T Consensus 78 ~~~~g~iyGrG~~D~Kg~~aa~l~A~~~l---~~~~~~~i~~~~~~dEE~g~~~~~~~l~~~~--~~d~~iv~E-----p 147 (348)
T PRK04443 78 RVEDGVLWGRGSVDAKGPLAAFAAAAARL---EALVRARVSFVGAVEEEAPSSGGARLVADRE--RPDAVIIGE-----P 147 (348)
T ss_pred EeeCCeEEeecccccccHHHHHHHHHHHh---cccCCCCEEEEEEcccccCChhHHHHHHhcc--CCCEEEEeC-----C
Confidence 25789999999 699999999999999 34688999999999999 5556666666543 468777653 4
Q ss_pred CcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhh---hcCCCCCCeeEEEEEEecCCcCc
Q 022137 193 TGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLIS---READPLQSLVLSVTYVRGGTAFN 269 (302)
Q Consensus 193 ~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~---~~~~~~~~~~~~~~~i~gg~~~n 269 (302)
++.. .+..+++|..+++|+++|+++|||.| |.||++.+++++..|+++.. .....+...++|++.|+ ...|
T Consensus 148 t~~~--~i~~~~kG~~~~~l~~~G~~~Hss~~--g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~i~~i~--~~~n 221 (348)
T PRK04443 148 SGWD--GITLGYKGRLLVTYVATSESFHSAGP--EPNAAEDAIEWWLAVEAWFEANDGRERVFDQVTPKLVDFD--SSSD 221 (348)
T ss_pred CCcc--ceeeecccEEEEEEEEEeCCCccCCC--CCCHHHHHHHHHHHHHHHHhcCccccccccccceeeeEEe--cCCC
Confidence 4421 13456789999999999999999987 79999999999999988643 11122445688898888 4579
Q ss_pred ccCCeEEEEEEEecCChhhHHHHHHHHHHhh
Q 022137 270 IIPPFVEFGGTLRSLTTEGLYQLQKRLKEFD 300 (302)
Q Consensus 270 ~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~ 300 (302)
+||++|++.+|+|++|+++.+++.++|++++
T Consensus 222 ~iP~~~~~~~d~R~~p~~~~~~i~~~i~~~~ 252 (348)
T PRK04443 222 GLTVEAEMTVGLRLPPGLSPEEAREILDALL 252 (348)
T ss_pred CCCceEEEEEEEccCCCCCHHHHHHHHHHhC
Confidence 9999999999999999999999999999876
No 37
>PRK08262 hypothetical protein; Provisional
Probab=100.00 E-value=6.7e-40 Score=313.49 Aligned_cols=265 Identities=15% Similarity=0.166 Sum_probs=209.1
Q ss_pred HHHhhHHHHHHHHHHHHhCCCCCcchH---------HHHHHHHHHHHhcCCCeee-ccCCceEEEEecCC-CC-cEEEEE
Q 022137 32 SAQQDKDWLVSVRRQIHENPELLFEEH---------NTSALIRRELDKLGIPYAY-PVAKTGIVAQIGSG-SR-PVVVLR 99 (302)
Q Consensus 32 ~~~~~~~~~~~~~~~l~~ips~~~~E~---------~~a~~l~~~l~~~g~~~~~-~~~~~nvia~~~~~-~~-~~i~l~ 99 (302)
-+....+++++++++|++|||++++|. ++++||.++|+.+|++++. ..+..|+++.+.+. ++ |+|+|+
T Consensus 38 ~~~~~~~~~v~~L~~lv~i~S~s~~~~~~~~~~~~~~~~~~L~~~~~~~g~~~~~~~~~~~~vv~~~~g~~~~~~~ill~ 117 (486)
T PRK08262 38 PVAVDEDAAAERLSEAIRFRTISNRDRAEDDAAAFDALHAHLEESYPAVHAALEREVVGGHSLLYTWKGSDPSLKPIVLM 117 (486)
T ss_pred CCcCCHHHHHHHHHHhcccceeccCCCCcccHHHHHHHHHHHHHhChhhhceeEEEEECCccEEEEEECCCCCCCeEEEE
Confidence 345567889999999999999999763 5899999999999997654 22346788887443 33 899999
Q ss_pred EecccCCCCCC--CCC---cccc-ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHH
Q 022137 100 ADMDALPLQEL--VEW---EHKS-KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFH 169 (302)
Q Consensus 100 ~H~DtVp~~~~--~~w---~~~~-~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~ 169 (302)
||+||||.++. ..| ||.+ .+||++|||| |||+++++|.|++.|++++..++++|.|+|+++|| |+.|+++
T Consensus 118 gH~DvVp~~~~~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~~G~~~ 197 (486)
T PRK08262 118 AHQDVVPVAPGTEGDWTHPPFSGVIADGYVWGRGALDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGGLGARA 197 (486)
T ss_pred CcccccCCCCCCcccCccCCCceEeeCCEEEecCccccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCCcCHHH
Confidence 99999998643 468 4543 4789999999 69999999999999998887889999999999999 6679988
Q ss_pred HHHcCCC--CCCceEE------Eeec--cCCCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHH
Q 022137 170 MIKEGAL--GDSEAIF------GMHI--DVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVIL 239 (302)
Q Consensus 170 ~~~~~~~--~~~d~~~------~~~~--~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~ 239 (302)
+++.... ...|+++ ..+. ....|++. .+.+++|..+++|+++|+++||+.|+. .||+..+++++.
T Consensus 198 l~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~p~~~----i~~~~kG~~~~~i~v~G~~~Hss~p~~-~nai~~l~~~l~ 272 (486)
T PRK08262 198 IAELLKERGVRLAFVLDEGGAITEGVLPGVKKPVAL----IGVAEKGYATLELTARATGGHSSMPPR-QTAIGRLARALT 272 (486)
T ss_pred HHHHHHHhcCCEEEEEeCCceecccccCCCCceEEe----eEEeeeeeEEEEEEEecCCCCCCCCCC-CCHHHHHHHHHH
Confidence 8763111 1233332 1111 11233332 345678999999999999999999998 999999999999
Q ss_pred HHHHhhhhc--------------------------------------------CCCCCCeeEEEEEEecCCcCcccCCeE
Q 022137 240 ALQQLISRE--------------------------------------------ADPLQSLVLSVTYVRGGTAFNIIPPFV 275 (302)
Q Consensus 240 ~l~~~~~~~--------------------------------------------~~~~~~~~~~~~~i~gg~~~n~iP~~~ 275 (302)
+|++...+. ......+++|++.|+||.+.|+||++|
T Consensus 273 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~I~gG~~~NvIP~~a 352 (486)
T PRK08262 273 RLEDNPLPMRLRGPVAEMFDTLAPEMSFAQRVVLANLWLFEPLLLRVLAKSPETAAMLRTTTAPTMLKGSPKDNVLPQRA 352 (486)
T ss_pred HHhhCCCCCccChHHHHHHHHHHHhcCHHHHHHhhcccchhhHHHHHHhcCCccceeEEeeeeeeEEecCCccccCCCcc
Confidence 998631100 001234789999999999999999999
Q ss_pred EEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 276 EFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 276 ~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
++.+|+|++|+++.+++.++|+++++
T Consensus 353 ~~~~diR~~p~~~~~~i~~~i~~~~~ 378 (486)
T PRK08262 353 TATVNFRILPGDSVESVLAHVRRAVA 378 (486)
T ss_pred EEEEEEEeCCCCCHHHHHHHHHHHhc
Confidence 99999999999999999999999875
No 38
>PRK07079 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-37 Score=296.00 Aligned_cols=269 Identities=14% Similarity=0.096 Sum_probs=204.6
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHhCCCCCcc---hHHHHHHHH----HHHHhcCCCeeec-----cCCceEEEEecCC-C
Q 022137 26 TNQVMISAQQDKDWLVSVRRQIHENPELLFE---EHNTSALIR----RELDKLGIPYAYP-----VAKTGIVAQIGSG-S 92 (302)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~l~~ips~~~~---E~~~a~~l~----~~l~~~g~~~~~~-----~~~~nvia~~~~~-~ 92 (302)
.+++.++++. +++++++++|++|||++++ +.++++|+. ++|+++|++++.. .+++||++.++++ +
T Consensus 7 ~~~~~~~~~~--~~~~~~L~~LV~ipSvs~~~~~~~~~~~~l~~~~~~~l~~~G~~~~~~~~~~~~~~~~vva~~~~~~~ 84 (469)
T PRK07079 7 IARAAAYFDS--GAFFADLARRVAYRTESQNPDRAPALRAYLTDEIAPALAALGFTCRIVDNPVAGGGPFLIAERIEDDA 84 (469)
T ss_pred HHHHHHhhcc--HHHHHHHHHHhccCCCCCCcccHHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCEEEEEeCCCCC
Confidence 3445555543 4789999999999999974 457777775 5899999998752 2468999998654 4
Q ss_pred CcEEEEEEecccCCCCCCCCCc-----cc-cccCCceecCC---CcHHHHHHHHHHHHHHhc-CCCCCceEEEEEeecCC
Q 022137 93 RPVVVLRADMDALPLQELVEWE-----HK-SKIDGKMHACG---HDVHTTMLLGAAKLIHQR-KDKLKGTVRILFQPAEE 162 (302)
Q Consensus 93 ~~~i~l~~H~DtVp~~~~~~w~-----~~-~~~~g~l~g~G---~kg~~a~~l~a~~~l~~~-~~~~~~~i~~~~~~~EE 162 (302)
+|+|+|+||+||||.++ +.|+ |. ..+||++|||| |||+++++|+|+++|++. +..+.++|.|++++|||
T Consensus 85 ~~~lll~gH~DvVp~~~-~~W~~~~~Pf~~~~~dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~~~~~~i~~~~~~dEE 163 (469)
T PRK07079 85 LPTVLIYGHGDVVRGYD-EQWREGLSPWTLTEEGDRWYGRGTADNKGQHTINLAALEQVLAARGGRLGFNVKLLIEMGEE 163 (469)
T ss_pred CCEEEEEcccCCCCCCh-HHhcccCCCCcccccCCEEEEEeccCCcHHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccc
Confidence 58999999999999764 3565 33 35789999999 699999999999998754 46788999999999999
Q ss_pred -ccCcHHHHHHcCC-CCCCceEEEeeccCCCCCcceeeecccccceeeEEEEEEEec--ccCCCCCCC--CCCHHHHHHH
Q 022137 163 -GGAGAFHMIKEGA-LGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGR--GGHAAMPHS--TIDPILTASS 236 (302)
Q Consensus 163 -g~~G~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~--~~Ha~~p~~--g~Nai~~~~~ 236 (302)
|+.|++++++++. ....|+++..++....+... .+..+++|.++++|+++|+ +.||+ ++. +.||+..+++
T Consensus 164 ~g~~G~~~l~~~~~~~~~~d~~iv~e~~~~~~~~~---~i~~g~kG~~~~~v~v~G~~~~~hs~-~~~g~~~nai~~l~~ 239 (469)
T PRK07079 164 IGSPGLAEVCRQHREALAADVLIASDGPRLSAERP---TLFLGSRGAVNFRLRVNLRDGAHHSG-NWGGLLRNPGTVLAH 239 (469)
T ss_pred cCCccHHHHHHHhHHhcCCCEEEEeCCCccCCCCe---EEEEecceEEEEEEEEeeCCCCCCCC-ccccccCCHHHHHHH
Confidence 7789999988752 11367777654321111111 1346789999999999998 44666 334 4799999999
Q ss_pred HHHHHHHhhhhc----------------------CC----------------------CCCCeeEEEEEEecCC---cCc
Q 022137 237 VILALQQLISRE----------------------AD----------------------PLQSLVLSVTYVRGGT---AFN 269 (302)
Q Consensus 237 ~i~~l~~~~~~~----------------------~~----------------------~~~~~~~~~~~i~gg~---~~n 269 (302)
+|..+.+..... .. .....++|++.|+||. +.|
T Consensus 240 ai~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nv~~i~gG~~~~~~N 319 (469)
T PRK07079 240 AIASLVDARGRIQVPGLRPPPLPAAVRAALADITVGGGPGDPAIDPDWGEPGLTPAERVFGWNTLEVLAFKTGNPDAPVN 319 (469)
T ss_pred HHHHhCCCCCCEecCCccCCCCCHHHHHHHHhCCCchhhhccCcccccCCCCcCHHHHHhhCCceEEEeeecCCCCCcce
Confidence 999985421000 00 0123589999999984 689
Q ss_pred ccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 270 IIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 270 ~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
+||++|++.+|+|++|+++.+++.++|+++++
T Consensus 320 vVP~~a~~~vdiR~~P~~~~e~v~~~l~~~i~ 351 (469)
T PRK07079 320 AIPGSARAVCQLRFVVGTDWENLAPHLRAHLD 351 (469)
T ss_pred EecCceEEEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999875
No 39
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=100.00 E-value=1.6e-37 Score=286.63 Aligned_cols=245 Identities=18% Similarity=0.201 Sum_probs=199.4
Q ss_pred HHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeecc------CCceEEEEecCC-CCcEEEEEEecccCCCCCCCC
Q 022137 40 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV------AKTGIVAQIGSG-SRPVVVLRADMDALPLQELVE 112 (302)
Q Consensus 40 ~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~~------~~~nvia~~~~~-~~~~i~l~~H~DtVp~~~~~~ 112 (302)
+++++++|++|||++++|.++++||.++|+++|++++... +++|+++.++++ ++|+|+|.||+||||.++ .
T Consensus 2 ~~~~~~~l~~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~l~~H~D~V~~~~--~ 79 (361)
T TIGR01883 2 LKKYFLELIQIDSESGKEKAILTYLKKQITKLGIPVSLDEVPAEVSNDNNLIARLPGTVKFDTIFFCGHMDTVPPGA--G 79 (361)
T ss_pred hHHHHHHHeecCCCCCcHHHHHHHHHHHHHHcCCEEEEeccccccCCCceEEEEEeCCCCCCcEEEEeeccccCCCC--C
Confidence 6788999999999999999999999999999999987632 378999999654 348999999999999864 3
Q ss_pred CccccccCCceecCCC-------cHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCCCCCCceEEE
Q 022137 113 WEHKSKIDGKMHACGH-------DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFG 184 (302)
Q Consensus 113 w~~~~~~~g~l~g~G~-------kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~ 184 (302)
|. ...++|++||||+ |++++++|++++.|++.+ .++++|.|+|++||| ++.|++.+.+.+. ..++.+.
T Consensus 80 ~~-~~~~~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~-~~~~~v~~~~~~~EE~g~~G~~~~~~~~~--~~~~~~~ 155 (361)
T TIGR01883 80 PE-PVVEDGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEE-TPHGTIEFIFTVKEELGLIGMRLFDESKI--TAAYGYC 155 (361)
T ss_pred CC-ceecCCeEecCCCeEeeccccHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccCchhHhHhChhhc--CcceeEE
Confidence 43 2356789999873 699999999999998865 578899999999999 6679998876432 2455544
Q ss_pred eeccCCCCCcceeeecccccceeeEEEEEEEecccCCC-CCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEEEe
Q 022137 185 MHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA-MPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVR 263 (302)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~-~p~~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~ 263 (302)
.++ ..+.+.+ ..+++|..+++++++|+++|++ .|+.|+||+..+++++.+++... .....++|++.++
T Consensus 156 ~~~--~~~~~~i----~~~~~g~~~~~i~~~G~~~Ha~~~p~~g~nAi~~~~~~i~~l~~~~-----~~~~~~~~i~~i~ 224 (361)
T TIGR01883 156 LDA--PGEVGNI----QLAAPTQVKVDATIAGKDAHAGLVPEDGISAISVARMAIHAMRLGR-----IDEETTANIGSFS 224 (361)
T ss_pred EeC--CCCcceE----EecCCceEEEEEEEEeeecCCCCCcccCcCHHHHHHHHHHhccccC-----CCCccccccceee
Confidence 432 2122332 3346799999999999999986 79999999999999999886531 1123678999999
Q ss_pred cCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 264 GGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 264 gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
||.+.|+||++|++.+|+|..|..+.+++.++|++.++
T Consensus 225 gG~~~nvVP~~~~~~~diR~~~~~~~~~~~~~i~~~i~ 262 (361)
T TIGR01883 225 GGVNTNIVQDEQLIVAEARSLSFRKAEAQVQTMRERFE 262 (361)
T ss_pred cCCccCccCCceEEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888888877664
No 40
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=100.00 E-value=7.2e-37 Score=290.55 Aligned_cols=262 Identities=14% Similarity=0.086 Sum_probs=199.3
Q ss_pred HHHHHHhhHHHHHHHHHHHHhCCCCCc------------chHHHHHHHHHHHHhcCCCeeeccCCceEEEEec-CCCCcE
Q 022137 29 VMISAQQDKDWLVSVRRQIHENPELLF------------EEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIG-SGSRPV 95 (302)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~l~~ips~~~------------~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~-~~~~~~ 95 (302)
+.++++++++++++++++|++|||.+. ++.++++|+.++|+++||+++..+ |+++.+. ++++|+
T Consensus 4 ~~~~i~~~~~~~~~~l~~lv~ipS~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~~~---~~~~~~~~~~~~~~ 80 (466)
T TIGR01886 4 FKEEVEARKDALLEDLEELLRIDSSEDLENATEEYPFGPGPVDALTKFLSFAERDGFTTKNFD---NYAGHVEYGAGDER 80 (466)
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCCcCCCCCCCccCCCChhHHHHHHHHHHHHHHCCCeEEEec---CCceeEEecCCCCE
Confidence 567788899999999999999999964 357789999999999999987532 3333332 223589
Q ss_pred EEEEEecccCCCCCCCCCc---ccc-ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcH
Q 022137 96 VVLRADMDALPLQELVEWE---HKS-KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGA 167 (302)
Q Consensus 96 i~l~~H~DtVp~~~~~~w~---~~~-~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~ 167 (302)
|+|+||+||||+++ .|. |.+ ++||++|||| |||+++++|.|+++|++.+..++++|.|+++++|| |+.|+
T Consensus 81 l~~~gH~DvVp~~~--~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~ 158 (466)
T TIGR01886 81 LGIIGHMDVVPAGE--GWTRDPFEPEIDEGRIYARGASDDKGPSLAAYYAMKILKELGLPPSKKIRFVVGTNEETGWVDM 158 (466)
T ss_pred EEEEeecccCCCCC--CCcCCCCCeEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCCCEEEEEECccccCcccH
Confidence 99999999999974 585 442 5789999999 59999999999999999988899999999999999 67899
Q ss_pred HHHHHcCCCCCCceEEEeeccC----CCCCcce-e-------------------------------eec-----------
Q 022137 168 FHMIKEGALGDSEAIFGMHIDV----GIPTGSI-A-------------------------------SIS----------- 200 (302)
Q Consensus 168 ~~~~~~~~~~~~d~~~~~~~~~----~~~~~~~-~-------------------------------~~~----------- 200 (302)
+++++++. .+|+++..+.+. +++.... . ...
T Consensus 159 ~~~~~~~~--~~d~~~~~d~~~~~~~ge~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~i~~~~~~~~~~~~ 236 (466)
T TIGR01886 159 DYYFKHEE--TPDFGFSPDAEFPIINGEKGNFTLELSFKGDNKGDYVLDSFKAGLAENMVPQVARAVISGPDAEALKAAY 236 (466)
T ss_pred HHHHhcCc--CCCEEEECCCCceeEEEecceEEEEEEEecCCCCceeEEEEEcCCcCCccCCeeEEEEecCCHHHHHHHH
Confidence 99998754 245543321100 0111100 0 000
Q ss_pred --ccccceee---------EEEEEEEecccCCCCCCCCCCHHHHHHHHHHHH----------HHhhhh------------
Q 022137 201 --GPHLAATS---------VFNVKVEGRGGHAAMPHSTIDPILTASSVILAL----------QQLISR------------ 247 (302)
Q Consensus 201 --~~~~~G~~---------~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l----------~~~~~~------------ 247 (302)
..+++|.. |++|+++|+++||+.|+.|+|||..|++++..+ +.+...
T Consensus 237 ~~~~~~kg~~~~~~~~~~~~~~i~v~G~~aH~s~P~~G~NAi~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 316 (466)
T TIGR01886 237 ESFLADKASLDGSFEINDESATIVLIGKGAHGAAPQVGINSATFLALFLNQYAFAGGAKNFIHFLAEVEHEDFYGEKLGI 316 (466)
T ss_pred HHHHhhccCceEEEEEeCCEEEEEEEeeEcccCCCCCCcCHHHHHHHHHHhccCChhHHHHHHHHHHhcCCCCCcccCCC
Confidence 11244543 799999999999999999999999999988873 222110
Q ss_pred --cCCCCCCeeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 248 --EADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 248 --~~~~~~~~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
.....+..|+|++.|+||.. | ++|++.+|+|++|+++.+++.++|+++++
T Consensus 317 ~~~~~~~g~~S~nvgvI~gG~~-~---~~~~l~iD~R~~Pge~~eev~~eI~~~i~ 368 (466)
T TIGR01886 317 AFHDELMGDLAMNAGMFDFDHA-N---KESKLLLNFRYPQGTSPETMQKQVLDKFG 368 (466)
T ss_pred cccccCcCceEEEeEEEEEecC-C---ceEEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 01124567999999999865 4 89999999999999999999999998765
No 41
>PRK07205 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-36 Score=288.15 Aligned_cols=260 Identities=16% Similarity=0.186 Sum_probs=192.9
Q ss_pred hhHHHHHHHHHHHHhCCCCCcch----------HHHHHHHHHHHHhcCCCeeeccCCceEEEEecCCCCcEEEEEEeccc
Q 022137 35 QDKDWLVSVRRQIHENPELLFEE----------HNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDA 104 (302)
Q Consensus 35 ~~~~~~~~~~~~l~~ips~~~~E----------~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~i~l~~H~Dt 104 (302)
+.++++++++++|++|||+++++ .++++|+.++|+++|++++......++++.++.+ +|+|+|+||+||
T Consensus 8 ~~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~g~~-~~~lll~gH~Dv 86 (444)
T PRK07205 8 KVQDACVAAIKTLVSYPSVLNEGENGTPFGQAIQDVLEATLDLCQGLGFKTYLDPKGYYGYAEIGQG-EELLAILCHLDV 86 (444)
T ss_pred HhHHHHHHHHHHHcccccccCCCcCCCCCchhHHHHHHHHHHHHHhCCCEEEEcCCCeEEEEEecCC-CcEEEEEEeecc
Confidence 45688999999999999999765 6788999999999999987654445667776533 489999999999
Q ss_pred CCCCCCCCCc---ccc-ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCCC
Q 022137 105 LPLQELVEWE---HKS-KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGAL 176 (302)
Q Consensus 105 Vp~~~~~~w~---~~~-~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~ 176 (302)
||+++.+.|. |.+ ++||++|||| |||+++++|.|+++|++.+..++++|.|+|++||| ++.|++++++....
T Consensus 87 Vp~~~~~~W~~~Pf~~~v~dg~lyGRGa~DmKgglaa~l~Al~~l~~~~~~~~~~i~l~~~~dEE~g~~g~~~~~~~~~~ 166 (444)
T PRK07205 87 VPEGDLSDWQTPPFEAVEKDGCLFGRGTQDDKGPSMAALYAVKALLDAGVQFNKRIRFIFGTDEETLWRCMNRYNEVEEQ 166 (444)
T ss_pred CCCCCcccCCCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcccHHHHHhCCCC
Confidence 9998777885 442 5689999999 69999999999999999888889999999999999 66788888774211
Q ss_pred C----CCc----eEEEee-----ccCCCCCcceee--------eccc---------------cccee----eEEEEEEEe
Q 022137 177 G----DSE----AIFGMH-----IDVGIPTGSIAS--------ISGP---------------HLAAT----SVFNVKVEG 216 (302)
Q Consensus 177 ~----~~d----~~~~~~-----~~~~~~~~~~~~--------~~~~---------------~~~G~----~~~~i~v~G 216 (302)
. ..| +.++.. .-.++|++.... .+.. .++|. .+.+++++|
T Consensus 167 ~~~~~~~~~~~~v~~~ekG~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~l~~~~~~~g~~~~~~~~~v~v~G 246 (444)
T PRK07205 167 ATMGFAPDSSFPLTYAEKGLLQAKLVGPGSDQLELEVGQAFNVVPAKASYQGPKLEAVKKELDKLGFEYVVKENEVTVLG 246 (444)
T ss_pred CCeeECCCCCCceEEEEeceEEEEEEeCCccceEEecCCcccccCceeEEEecCHHHHHHHHHhcCceEeecCcEEEEEe
Confidence 0 011 111100 000122221100 1111 11231 244999999
Q ss_pred cccCCCCCCCCCCHHHHHHHHHHHHHHhhh-----hc--------------CC-CCCCeeEEEEEEecCCcCcccCCeEE
Q 022137 217 RGGHAAMPHSTIDPILTASSVILALQQLIS-----RE--------------AD-PLQSLVLSVTYVRGGTAFNIIPPFVE 276 (302)
Q Consensus 217 ~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~-----~~--------------~~-~~~~~~~~~~~i~gg~~~n~iP~~~~ 276 (302)
+++||++|+.|.|||..+++++.++++... .. .+ ..+..++|++.+ |+||++|+
T Consensus 247 ~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nvg~~------nvvP~~a~ 320 (444)
T PRK07205 247 KSVHAKDAPQGINAVIRLAKALVVLEPHPALDFLANVIGEDATGLNIFGDIEDEPSGKLSFNIAGL------TITKEKSE 320 (444)
T ss_pred EEcccCCCccCcCHHHHHHHHHHhccHHHHHHHHHHhcCCCCccccCCccccCCCcCCceEEeEEE------EEECCEEE
Confidence 999999999999999999999988865310 00 01 123467777653 79999999
Q ss_pred EEEEEecCChhhHHHHHHHHHHhhh
Q 022137 277 FGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 277 ~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
+.+|+|+.|+++.+++.+.|+++++
T Consensus 321 ~~ld~R~~p~~~~e~v~~~i~~~~~ 345 (444)
T PRK07205 321 IRIDIRIPVLADKEKLVQQLSQKAQ 345 (444)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999998764
No 42
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-36 Score=282.64 Aligned_cols=266 Identities=24% Similarity=0.331 Sum_probs=206.8
Q ss_pred HHHHHhhHHHHHHHHHHHHhCCCCC-cchHHHHHHHHHHHHhcCCCeeecc-C----CceEEEEecCCCC-cEEEEEEec
Q 022137 30 MISAQQDKDWLVSVRRQIHENPELL-FEEHNTSALIRRELDKLGIPYAYPV-A----KTGIVAQIGSGSR-PVVVLRADM 102 (302)
Q Consensus 30 ~~~~~~~~~~~~~~~~~l~~ips~~-~~E~~~a~~l~~~l~~~g~~~~~~~-~----~~nvia~~~~~~~-~~i~l~~H~ 102 (302)
.......++++++++++++++||++ ..+.++++|+.++|+++|+.++... . ..|+++.++++++ |+|+|+||+
T Consensus 5 ~~~~~~~~~~~~~~l~~lv~~~s~s~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~n~~~~~~~~~~~~~l~l~~H~ 84 (409)
T COG0624 5 LEVSLDLLDDILELLKELVRIPSVSAGEEAEAAELLAEWLEELGFEVEEDEVGPGPGRPNLVARLGGGDGGPTLLLGGHL 84 (409)
T ss_pred HHHHHHhhHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHcCCceEEeecCCCCCceEEEEEecCCCCCCeEEEeccc
Confidence 3445566778889999999999999 8899999999999999999987632 2 4599999987643 899999999
Q ss_pred ccCCCCCCCCCcc---c-cccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcC
Q 022137 103 DALPLQELVEWEH---K-SKIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEG 174 (302)
Q Consensus 103 DtVp~~~~~~w~~---~-~~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~ 174 (302)
||||.++...|.+ . ..+||++|||| |||++++++.|++.|.+.+..++++|.+++++||| ++.|.+.++.++
T Consensus 85 DvVP~g~~~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~~~~~ 164 (409)
T COG0624 85 DVVPAGGGEDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVRLLFTADEESGGAGGKAYLEEG 164 (409)
T ss_pred cccCCCCcccCccCCCccEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEEEEEEEeccccCCcchHHHHHhc
Confidence 9999998778954 4 24578999999 59999999999999999877899999999999999 567888887765
Q ss_pred CC---CCCceEEEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCCC--CCCCCC----HHHHHHHHHHHHHHhh
Q 022137 175 AL---GDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAM--PHSTID----PILTASSVILALQQLI 245 (302)
Q Consensus 175 ~~---~~~d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~--p~~g~N----ai~~~~~~i~~l~~~~ 245 (302)
.. ..+|+++..++......+.... .+++|..+++|+++|+++|+|+ |+.+.| |+..+++++..+.++.
T Consensus 165 ~~~~~~~~d~~i~~E~~~~~~~~~~~~---~~~kG~~~~~v~v~G~~~Has~~~p~~~~n~i~~a~~~~~~~~~~~~~~~ 241 (409)
T COG0624 165 EEALGIRPDYEIVGEPTLESEGGDIIV---VGHKGSLWLEVTVKGKAGHASTTPPDLGRNPIHAAIEALAELIEELGDLA 241 (409)
T ss_pred chhhccCCCEEEeCCCCCcccCCCeEE---EcceeEEEEEEEEEeecccccccCCcccccHHHHHHHHHHHHHHHhcccc
Confidence 31 3467666654311112233222 2678999999999999999997 999999 5555555555555432
Q ss_pred hhcCCCCC-CeeEEEEEEecCCc--------CcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 246 SREADPLQ-SLVLSVTYVRGGTA--------FNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 246 ~~~~~~~~-~~~~~~~~i~gg~~--------~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
... .. ..+++++.+.++.. .|+||++|++.+|+|+.|..+.+++.+++++.++
T Consensus 242 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~nviP~~~~~~~d~R~~p~~~~~~~~~~v~~~i~ 303 (409)
T COG0624 242 GEG---FDGPLGLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRLLPGEDLDDVLEELEAELR 303 (409)
T ss_pred ccc---ccCCccccccccccCCcccccCCccCceecceEEEEEEEecCCcCCHHHHHHHHHHHHH
Confidence 211 12 46777776665544 5999999999999999999998888877777664
No 43
>PRK07318 dipeptidase PepV; Reviewed
Probab=100.00 E-value=3.4e-36 Score=286.35 Aligned_cols=264 Identities=16% Similarity=0.164 Sum_probs=199.9
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhCCCCCcc------------hHHHHHHHHHHHHhcCCCeeeccCCceEEEEec-CCCCc
Q 022137 28 QVMISAQQDKDWLVSVRRQIHENPELLFE------------EHNTSALIRRELDKLGIPYAYPVAKTGIVAQIG-SGSRP 94 (302)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~l~~ips~~~~------------E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~-~~~~~ 94 (302)
++.++++++++++++++++|++|||++++ +.++++|+.++|+++|++++..+ |+++.+. ++..|
T Consensus 4 ~~~~~~~~~~~~~~~~l~~lv~i~S~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~G~~~~~~~---n~~~~~~~~~~~~ 80 (466)
T PRK07318 4 DWKKEVEKRKDDLIEDLQELLRINSVRDDSKAKEGAPFGPGPVKALEKFLEIAERDGFKTKNVD---NYAGHIEYGEGEE 80 (466)
T ss_pred hHHHHHHHhHHHHHHHHHHHhccCcccCCcccccCCCCCccHHHHHHHHHHHHHHCCCEEEEec---CccceEEECCCCC
Confidence 46788889999999999999999999865 56899999999999999987542 5666543 22348
Q ss_pred EEEEEEecccCCCCCCCCCcccc----ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCc
Q 022137 95 VVVLRADMDALPLQELVEWEHKS----KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAG 166 (302)
Q Consensus 95 ~i~l~~H~DtVp~~~~~~w~~~~----~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G 166 (302)
+|+|+||+||||.++ .|.++| ++||++|||| |||+++++++|++.|++.+..++++|.++|++||| |+.|
T Consensus 81 ~l~l~gH~DvVp~~~--~W~~~Pf~~~~~dg~lyGRG~~DmKgg~aa~l~Al~~l~~~g~~~~~~i~l~~~~DEE~g~~G 158 (466)
T PRK07318 81 VLGILGHLDVVPAGD--GWDTDPYEPVIKDGKIYARGTSDDKGPTMAAYYALKIIKELGLPLSKKVRFIVGTDEESGWKC 158 (466)
T ss_pred EEEEEEecCCCCCCC--CCCCCCcceEEECCEEEEcccccCcHHHHHHHHHHHHHHHcCCCCCccEEEEEEcccccCchh
Confidence 999999999999874 585433 4689999999 69999999999999998888888999999999999 6789
Q ss_pred HHHHHHcCCCCC----Cc----eEEEee----------------------ccCCCCCccee------ee-----------
Q 022137 167 AFHMIKEGALGD----SE----AIFGMH----------------------IDVGIPTGSIA------SI----------- 199 (302)
Q Consensus 167 ~~~~~~~~~~~~----~d----~~~~~~----------------------~~~~~~~~~~~------~~----------- 199 (302)
++++++...... .| ++++.. ..++.+++.+. ..
T Consensus 159 ~~~l~~~~~~~~~~~~~d~~~~vi~~E~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~ 238 (466)
T PRK07318 159 MDYYFEHEEAPDFGFSPDAEFPIINGEKGITTFDLVHFEGENEGDYVLVSFKSGLRENMVPDSAEAVITGDDLDDLIAAF 238 (466)
T ss_pred HHHHHHhCCCCCEEEEeCCCCcEEEEEeeeEEEEEEeccccCCCCceeEEEEcCccceecCcccEEEEecCCHHHHHHHH
Confidence 999988643110 11 111110 00011111100 00
Q ss_pred ----cccccceee-----EEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHh------hh------------------
Q 022137 200 ----SGPHLAATS-----VFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQL------IS------------------ 246 (302)
Q Consensus 200 ----~~~~~~G~~-----~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~------~~------------------ 246 (302)
...+++|.. |++|+++|+++|++.|+.|.|||..+++++.+|+.. ..
T Consensus 239 ~~~~~~~~~kG~~~~~~~~~~i~v~G~aaH~s~p~~g~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (466)
T PRK07318 239 EAFLAENGLKGELEEEGGKLVLTVIGKSAHGSTPEKGVNAATYLAKFLNQLNLDGDAKAFLDFAAEYLHEDTRGEKLGIA 318 (466)
T ss_pred HHHHhhcCceEEEEecCCEEEEEEEeeEcccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCCcccCCCc
Confidence 001356654 799999999999999999999999999999998641 00
Q ss_pred hcCCCCCCeeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 247 READPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 247 ~~~~~~~~~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
......+..++|++.|+||.+. +|++.+|+|++|+++.+++.++|+++++
T Consensus 319 ~~~~~~g~~t~nvg~i~gg~~~-----~~~~~iDiR~~p~~~~~~v~~~i~~~~~ 368 (466)
T PRK07318 319 YEDDVMGDLTMNVGVFSFDEEK-----GGTLGLNFRYPVGTDFEKIKAKLEKLIG 368 (466)
T ss_pred ccCCCccCeEEEeeEEEEecCc-----EEEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 0011124579999999998532 7999999999999999999999998764
No 44
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=5.9e-36 Score=267.22 Aligned_cols=260 Identities=17% Similarity=0.226 Sum_probs=206.4
Q ss_pred HHHHHHHHHHHhCCCCCcc--hH-HHHHHHHHHHHhcCCCeee---ccCCceEEEEecCC-C-CcEEEEEEecccCCCCC
Q 022137 38 DWLVSVRRQIHENPELLFE--EH-NTSALIRRELDKLGIPYAY---PVAKTGIVAQIGSG-S-RPVVVLRADMDALPLQE 109 (302)
Q Consensus 38 ~~~~~~~~~l~~ips~~~~--E~-~~a~~l~~~l~~~g~~~~~---~~~~~nvia~~~~~-~-~~~i~l~~H~DtVp~~~ 109 (302)
...+..+++..+||+...+ -. .+++|+.++.+.+|..++. .....+++.+|.|. + -|+|+|++|+||||+..
T Consensus 25 ~~~v~~f~eylRi~Tv~p~~dy~~a~~~Fl~~~a~~l~l~~~~i~~~p~~~~~l~T~~GS~P~L~silL~SH~DVVP~f~ 104 (420)
T KOG2275|consen 25 NISVTRFREYLRIPTVQPNPDYTIACADFLKKYAKSLGLTVQKIESEPGKYVLLYTWLGSDPELPSILLNSHTDVVPVFR 104 (420)
T ss_pred chHHHHHHHHhhccccccCCCccHHHHHHHHHHHHhcCCceeEEEecCceeEEEEEeeCCCCCccceeeeccccccCCCc
Confidence 3344455566677775443 24 8999999999999998765 45688888888654 3 48999999999999976
Q ss_pred CCCCcccc-----ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC--ccCcHHHHHHcCCCCCC
Q 022137 110 LVEWEHKS-----KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE--GGAGAFHMIKEGALGDS 179 (302)
Q Consensus 110 ~~~w~~~~-----~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE--g~~G~~~~~~~~~~~~~ 179 (302)
+ +|+++| .+||.||||| ||+..+++|+|++.|+..+.+++++|.+.|++||| |..|++.+.+...+++.
T Consensus 105 e-~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti~lsfvpDEEi~G~~Gm~~fa~~~~~~~l 183 (420)
T KOG2275|consen 105 E-KWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTIHLSFVPDEEIGGHIGMKEFAKTEEFKKL 183 (420)
T ss_pred c-cCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceEEEEecCchhccCcchHHHHhhhhhhccc
Confidence 5 897764 3689999999 59999999999999999999999999999999999 46899988774445544
Q ss_pred ceEEEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhc---------CC
Q 022137 180 EAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISRE---------AD 250 (302)
Q Consensus 180 d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~---------~~ 250 (302)
...+.++.+...+... ..++.++||.+|++++++|++||+|.| .-..|+..+.++++.+.+..... ..
T Consensus 184 ~~~filDEG~~se~d~--~~vfyaEkg~w~~~v~~~G~~GHss~~-~~nTa~~~l~klv~~~~~fr~~q~~~l~~~p~~~ 260 (420)
T KOG2275|consen 184 NLGFILDEGGATENDF--ATVFYAEKGPWWLKVTANGTPGHSSYP-PPNTAIEKLEKLVESLEEFREKQVDLLASGPKLA 260 (420)
T ss_pred ceeEEecCCCCCcccc--eeEEEEeeceeEEEEEecCCCCCCCCC-CCccHHHHHHHHHHHHHHhHHHHHHHhhcCCcee
Confidence 4555554332222222 456788999999999999999999975 22568888888888887765211 11
Q ss_pred CCCCeeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHH-HHhhh
Q 022137 251 PLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRL-KEFDR 301 (302)
Q Consensus 251 ~~~~~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i-~~~~~ 301 (302)
..+.+|+|++.|+||.+.|++|.++++.+|+|+.+..+++++.+++ +++++
T Consensus 261 ~~~vtT~Nv~~i~GGv~~N~~P~~~ea~~dirv~~~~d~~~i~~~l~~~w~~ 312 (420)
T KOG2275|consen 261 LGDVTTINVGIINGGVQSNVLPETFEAAFDIRVRPHVDVKAIRDQLEDEWAE 312 (420)
T ss_pred ccceeEEeeeeeecccccCcCchhheeeeeeEeccCCCHHHHHHHHHHHhhh
Confidence 2467899999999999999999999999999999999999999999 77764
No 45
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=100.00 E-value=7.1e-36 Score=273.06 Aligned_cols=232 Identities=15% Similarity=0.124 Sum_probs=188.4
Q ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCCCCcEEEEEEecccCCCCCCCCCccccccCC
Q 022137 42 SVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEHKSKIDG 121 (302)
Q Consensus 42 ~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~w~~~~~~~g 121 (302)
+++++|++|||++++|.++++||.++|+++|+++.. +..+|+++..+++ +|+|+|+||+||||. .|+.. .+||
T Consensus 1 ~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~-~~~~~~~~~~~~~-~~~i~~~~H~D~vp~----~~~~~-~~~g 73 (336)
T TIGR01902 1 ELLKDLLEIYSPSGKEANAAKFLEEISKDLGLKLII-DDAGNFILGKGDG-HKKILLAGHVDTVPG----YIPVK-IEGG 73 (336)
T ss_pred ChHHHHhcCCCCCcchHHHHHHHHHHHHHcCCEEEE-CCCCcEEEEeCCC-CceEEEEccccccCC----CcccE-EeCC
Confidence 368899999999999999999999999999999854 4567888876433 589999999999985 35443 5789
Q ss_pred ceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCCCCCCceEEEeeccCCCCCccee
Q 022137 122 KMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIA 197 (302)
Q Consensus 122 ~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 197 (302)
++|||| ||++++++|+|++.|++. ..+|.|++++||| ++.|+++++++.. .++++.. +|++.-
T Consensus 74 ~i~GrG~~D~Kg~~aa~l~a~~~l~~~----~~~i~~~~~~dEE~g~~G~~~~~~~~~---~~~~ii~-----ept~~~- 140 (336)
T TIGR01902 74 LLYGRGAVDAKGPLIAMIFATWLLNEK----GIKVIVSGLVDEESSSKGAREVIDKNY---PFYVIVG-----EPSGAE- 140 (336)
T ss_pred EEEEecccCCCcHHHHHHHHHHHHHhC----CCcEEEEEEeCcccCCccHHHHHhhcC---CCEEEEe-----cCCCCc-
Confidence 999999 599999999999999864 3589999999999 6689999998753 2355543 244421
Q ss_pred eecccccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEEEecCCcCcccCCeEEE
Q 022137 198 SISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEF 277 (302)
Q Consensus 198 ~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~gg~~~n~iP~~~~~ 277 (302)
.+..+++|..+++++++|+++|++.|. ||+..+.++++.|.+.... .......+++++.++||.+.|+||++|++
T Consensus 141 -~i~~~~kG~~~~~v~~~G~~~Hss~~~---~ai~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~i~gg~~~nvIP~~a~~ 215 (336)
T TIGR01902 141 -GITLGYKGSLQLKIMCEGTPFHSSSAG---NAAELLIDYSKKIIEVYKQ-PENYDKPSIVPTIIRFGESYNDTPAKLEL 215 (336)
T ss_pred -ceeeeeeeEEEEEEEEEecCcccCCCh---hHHHHHHHHHHHHHHHhcc-ccCCCCCcceeEEEEccCCCcCCCceEEE
Confidence 234568899999999999999999885 5999999999998742211 11122357889999999999999999999
Q ss_pred EEEEecCChhhHHHHHHHHHH
Q 022137 278 GGTLRSLTTEGLYQLQKRLKE 298 (302)
Q Consensus 278 ~~diR~~~~~~~~~v~~~i~~ 298 (302)
.+|+|+.|.++.+++.+++++
T Consensus 216 ~idiR~~p~~~~~~~~~~i~~ 236 (336)
T TIGR01902 216 HFDLRYPPNNKPEEAIKEITD 236 (336)
T ss_pred EEEEeeCCCCCHHHHHHHHHh
Confidence 999999999999999888875
No 46
>PRK13381 peptidase T; Provisional
Probab=100.00 E-value=1.1e-35 Score=278.39 Aligned_cols=246 Identities=13% Similarity=0.133 Sum_probs=193.8
Q ss_pred HHHHHHHHHhCCCCCc----------chHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCC-CC-cEEEEEEecccCCC
Q 022137 40 LVSVRRQIHENPELLF----------EEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG-SR-PVVVLRADMDALPL 107 (302)
Q Consensus 40 ~~~~~~~l~~ips~~~----------~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~-~~-~~i~l~~H~DtVp~ 107 (302)
+++.++++++|||+++ .+.++++||.++|+++|++.+..++.+||+++++++ ++ |+|+|+||+||||.
T Consensus 3 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~nvi~~~~g~~~~~~~lll~~H~D~Vp~ 82 (404)
T PRK13381 3 LTDRFFRYLKVNSQSDAASGTLPSTPGQHELAKLLADELRELGLEDIVIDEHAIVTAKLPGNTPGAPRIGFIAHLDTVDV 82 (404)
T ss_pred HHHHhHhhEEEeccCCCCCCCCcCChhHHHHHHHHHHHHHHcCCCcEEEcCCeEEEEEEecCCCCCCeEEEEEEecCCCc
Confidence 4667788899999997 478999999999999999765566788999999654 43 89999999999998
Q ss_pred CCCC--CC---cccc------------------------ccCCceecCC-------CcHHHHHHHHHHHHHHhcCCCCCc
Q 022137 108 QELV--EW---EHKS------------------------KIDGKMHACG-------HDVHTTMLLGAAKLIHQRKDKLKG 151 (302)
Q Consensus 108 ~~~~--~w---~~~~------------------------~~~g~l~g~G-------~kg~~a~~l~a~~~l~~~~~~~~~ 151 (302)
+... .| +|+. ..||++|||| |||+++++|.|+++|++.+ .+++
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~-~~~g 161 (404)
T PRK13381 83 GLSPDIHPQILRFDGGDLCLNAEQGIWLRTAEHPELLNYQGEDIIFSDGTSVLGADNKAAIAVVMTLLENLTENE-VEHG 161 (404)
T ss_pred cCCCCcCcEEEecCCCceecCCccceeechHhChhHHhccCCcEEeCCCccccccccHHHHHHHHHHHHHHHhcC-CCCC
Confidence 6520 11 1110 2467899977 4899999999999998874 4688
Q ss_pred eEEEEEeecCC-ccCcHHHHHHcCCCCCCceEEEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCC-CCCCCCC
Q 022137 152 TVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA-MPHSTID 229 (302)
Q Consensus 152 ~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~-~p~~g~N 229 (302)
+|.|+|+++|| ++.|+++++.++. . .|+++.++. +++. .+ ..+++|..|++|+++|+++|++ .|+.|.|
T Consensus 162 ~i~~~~~~dEE~g~~G~~~~~~~~~-~-~d~~~~~~~--~~~~-~i----~~~~~G~~~~~v~v~Gk~aHa~~~p~~g~N 232 (404)
T PRK13381 162 DIVVAFVPDEEIGLRGAKALDLARF-P-VDFAYTIDC--CELG-EV----VYENFNAASAEITITGVTAHPMSAKGVLVN 232 (404)
T ss_pred CEEEEEEcccccccccHHHHHHhcC-C-CCEEEEecC--CCcc-eE----EEecCcceEEEEEEEeEecCCCCCcccCcC
Confidence 99999999999 5689999977643 3 677776543 2343 22 2346899999999999999988 5888999
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 230 PILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 230 ai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
|+..+++++.+|+++..+........+++++.++|+ |++|++.+|+|+.|.++.+++.++|+++++
T Consensus 233 AI~~a~~~i~~l~~~~~~~~~~~~~~~i~v~~i~g~------p~~~~~~~diR~~~~~~~e~i~~~i~~~~~ 298 (404)
T PRK13381 233 PILMANDFISHFPRQETPEHTEGREGYIWVNDLQGN------VNKAKLKLIIRDFDLDGFEARKQFIEEVVA 298 (404)
T ss_pred HHHHHHHHHHhCCccCCCCCCCCcccEEEEEeEEeC------cceEEEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 999999999999876433222222346788877764 899999999999999999999999888764
No 47
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.4e-34 Score=271.60 Aligned_cols=245 Identities=17% Similarity=0.185 Sum_probs=192.3
Q ss_pred HHHHHHHHHHHHhCCC---------CCcchHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCC-CCcEEEEEEecccCC
Q 022137 37 KDWLVSVRRQIHENPE---------LLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG-SRPVVVLRADMDALP 106 (302)
Q Consensus 37 ~~~~~~~~~~l~~ips---------~~~~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~-~~~~i~l~~H~DtVp 106 (302)
.+++++.+++|++++| .+++|.++++||.++|+++|++++.. ..+|+++++++. ++|+|+|.||+||||
T Consensus 9 ~~~~~~~~~~~~~~~s~~~g~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nl~a~~~g~~~~~~l~l~gH~DtVp 87 (412)
T PRK12892 9 GQRVLDDLMELAAIGAAKTGVHRPTYSDAHVAARRRLAAWCEAAGLAVRID-GIGNVFGRLPGPGPGPALLVGSHLDSQN 87 (412)
T ss_pred HHHHHHHHHHHHccCCCCCCeeeCCCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCeEEEEccccCCC
Confidence 4578888888888876 45678999999999999999998864 577999999763 458899999999999
Q ss_pred CCCCCCCccccccCCceecCCCcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCCcc------CcHHHHHHcCCC----
Q 022137 107 LQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG------AGAFHMIKEGAL---- 176 (302)
Q Consensus 107 ~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~------~G~~~~~~~~~~---- 176 (302)
.+ |++||+ ++++++|++++.|++.+..++++|.|++++|||++ .|++.++.+...
T Consensus 88 ~~------------g~~dg~---~Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~ 152 (412)
T PRK12892 88 LG------------GRYDGA---LGVVAGLEAARALNEHGIATRHPLDVVAWCDEEGSRFTPGFLGSRAYAGRLDPADAL 152 (412)
T ss_pred CC------------Ccccch---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCcccccccCccccHHHHHcCCCHHHHH
Confidence 75 334554 58999999999999988889999999999999952 588888743110
Q ss_pred ------C-------------CCce-----------EEEeeccCC---CCCcceeeecccccceeeEEEEEEEecccCCC-
Q 022137 177 ------G-------------DSEA-----------IFGMHIDVG---IPTGSIASISGPHLAATSVFNVKVEGRGGHAA- 222 (302)
Q Consensus 177 ------~-------------~~d~-----------~~~~~~~~~---~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~- 222 (302)
. ..|. .+-.|.+++ ++++. ...+..+++|..+++|+++|+++|++
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~d~~~~~ep~~~~~~~e~~~~~g~~~e~~~~-~~~i~~~~kG~~~~~i~v~G~~aHa~~ 231 (412)
T PRK12892 153 AARCRSDGVPLRDALAAAGLAGRPRPAADRARPKGYLEAHIEQGPVLEQAGL-PVGVVTGIVGIWQYRITVTGEAGHAGT 231 (412)
T ss_pred hCccCCCCcCHHHHHHHcCCChhhcccccccCccEEEEEEeccCHhHhhCCC-cEEEEEEeccceEEEEEEEEECCCCCC
Confidence 0 0111 122222211 12221 11234678999999999999999997
Q ss_pred CCC-CCCCHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEEEecC-CcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhh
Q 022137 223 MPH-STIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGG-TAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFD 300 (302)
Q Consensus 223 ~p~-~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~gg-~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~ 300 (302)
.|+ .|.||+..+++++++++++..+.. .+.+++++.|+|| .+.|+||++|++.+|+|+.|.++.+++.++|++++
T Consensus 232 ~p~~~g~nAi~~a~~~i~~l~~~~~~~~---~~~~~~vg~i~gg~~~~NvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~ 308 (412)
T PRK12892 232 TPMALRRDAGLAAAEMIAAIDEHFPRVC---GPAVVTVGRVALDPGSPSIIPGRVEFSFDARHPSPPVLQRLVALLEALC 308 (412)
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHhcC---CCcEEEEEEEEecCCCCeEECCeEEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 575 589999999999999998643322 3479999999987 79999999999999999999999999999999887
Q ss_pred h
Q 022137 301 R 301 (302)
Q Consensus 301 ~ 301 (302)
+
T Consensus 309 ~ 309 (412)
T PRK12892 309 R 309 (412)
T ss_pred H
Confidence 5
No 48
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2e-34 Score=270.51 Aligned_cols=245 Identities=18% Similarity=0.243 Sum_probs=193.6
Q ss_pred HHHHHHHHHHHHhCCCC----------CcchHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCC--CCcEEEEEEeccc
Q 022137 37 KDWLVSVRRQIHENPEL----------LFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG--SRPVVVLRADMDA 104 (302)
Q Consensus 37 ~~~~~~~~~~l~~ips~----------~~~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~--~~~~i~l~~H~Dt 104 (302)
.+++++++++|++++|. +++|.++++||.++|+++|++++.. ...|+++++++. ++|+|+|.||+||
T Consensus 9 ~~~~~~~l~~l~~i~s~~~~~~~~~~~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~n~~a~~~g~~~~~~~l~l~~H~Dt 87 (412)
T PRK12893 9 GERLWDSLMALARIGATPGGGVTRLALTDEDREARDLLAQWMEEAGLTVSVD-AIGNLFGRRAGTDPDAPPVLIGSHLDT 87 (412)
T ss_pred HHHHHHHHHHHhcccCCCCCcEEeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEeCCCCCCCCEEEEEecccC
Confidence 46788999999999953 4558999999999999999998763 567999999553 2589999999999
Q ss_pred CCCCCCCCCccccccCCceecCCCcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCCc------cCcHHHHHHcCCC--
Q 022137 105 LPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG------GAGAFHMIKEGAL-- 176 (302)
Q Consensus 105 Vp~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg------~~G~~~~~~~~~~-- 176 (302)
||.+ |.+|| |++++++|+++++|++.+..++++|.|+|++|||+ +.|++.+......
T Consensus 88 Vp~~------------g~~dg---k~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~G~~~~~~~~~~~~ 152 (412)
T PRK12893 88 QPTG------------GRFDG---ALGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGARFAPAMLGSGVFTGALPLDD 152 (412)
T ss_pred CCCC------------Ccccc---hhhHHHHHHHHHHHHHcCCCCCCCeEEEEEccccccccccccccHHHHhCcCChHH
Confidence 9974 33344 57999999999999998878899999999999995 3578777643210
Q ss_pred -----------------------------CCCceEEEeeccCCC---CCcceeeecccccceeeEEEEEEEecccCCCC-
Q 022137 177 -----------------------------GDSEAIFGMHIDVGI---PTGSIASISGPHLAATSVFNVKVEGRGGHAAM- 223 (302)
Q Consensus 177 -----------------------------~~~d~~~~~~~~~~~---~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~- 223 (302)
.+.+..+.+|..++. +.+. ...+..+++|..+++|+++|+++|++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~v~G~~aHas~~ 231 (412)
T PRK12893 153 ALARRDADGITLGEALARIGYRGTARVGRRAVDAYLELHIEQGPVLEAEGL-PIGVVTGIQGIRWLEVTVEGQAAHAGTT 231 (412)
T ss_pred HHhccCCCCCCHHHHHHHcCCCcccccccCCccEEEEEEeccCHHHHHCCC-cEEEEeeecccEEEEEEEEEECCCcCCC
Confidence 012334444432210 1111 123446789999999999999999984
Q ss_pred CC-CCCCHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEEEecC-CcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 224 PH-STIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGG-TAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 224 p~-~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~gg-~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
|+ .|+|||..+++++.+|+++..+.. ...+++++.|++| .+.|+||++|++.+|+|+.|.++.+++.++|+++++
T Consensus 232 p~~~G~NAI~~a~~~i~~l~~~~~~~~---~~~~~~vg~i~ggg~~~NvVP~~a~~~~diR~~p~~~~~~i~~~i~~~~~ 308 (412)
T PRK12893 232 PMAMRRDALVAAARIILAVERIAAALA---PDGVATVGRLRVEPNSRNVIPGKVVFTVDIRHPDDARLDAMEAALRAACA 308 (412)
T ss_pred cchhccCHHHHHHHHHHHHHHHHHhcC---CCceEEEEEEEeeCCCceEECCeeEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 85 799999999999999998754321 2478999999985 799999999999999999999999999999998874
No 49
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=100.00 E-value=4.3e-35 Score=274.53 Aligned_cols=249 Identities=14% Similarity=0.161 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHhCCCCCc----------chHHHHHHHHHHHHhcCCC-eeeccCCceEEEEecCCCC---cEEEEEEecc
Q 022137 38 DWLVSVRRQIHENPELLF----------EEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQIGSGSR---PVVVLRADMD 103 (302)
Q Consensus 38 ~~~~~~~~~l~~ips~~~----------~E~~~a~~l~~~l~~~g~~-~~~~~~~~nvia~~~~~~~---~~i~l~~H~D 103 (302)
+++++.+.++++|+|+|+ .|+++|+||.++|+++|++ +..+.+.+||+|.+++..+ |+|+|.||||
T Consensus 3 ~~~~~~f~~~~~i~s~s~~~~~~~ps~~~~~~~a~~l~~~l~~lG~~~v~~d~~~gnv~~~~~~~~~~~~~~i~~~aHmD 82 (410)
T TIGR01882 3 EELLPRFLTYVKVNTRSDENSDTCPSTPGQLTFGNMLVDDLKSLGLQDAHYDEKNGYVIATIPSNTDKDVPTIGFLAHVD 82 (410)
T ss_pred hHHHHHHHhhEEEecccCCCCCCCCCCHhHHHHHHHHHHHHHHcCCceEEEcCCceEEEEEecCCCCCCCCEEEEEEecc
Confidence 567777788889999997 5568999999999999998 6555338999999865433 9999999999
Q ss_pred cCCCCCCC-------------------------CCcccc-----------ccCCceecCCCcHHHHHHHHHHHHHHhcCC
Q 022137 104 ALPLQELV-------------------------EWEHKS-----------KIDGKMHACGHDVHTTMLLGAAKLIHQRKD 147 (302)
Q Consensus 104 tVp~~~~~-------------------------~w~~~~-----------~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~ 147 (302)
||+..... .|.|++ .+++.+||.+||+++|++|+|++.|++.+.
T Consensus 83 Tv~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~g~~l~G~D~KgglAa~l~A~~~L~e~~~ 162 (410)
T TIGR01882 83 TADFNGENVNPQIIENYDGESIIQLGDLEFTLDPDQFPNLSGYKGQTLITTDGTTLLGADDKAGIAEIMTAADYLINHPE 162 (410)
T ss_pred cCcCCCCCCCCEEEecCCCceeeecCCCCeEEChHhChhHHhccCceEEEcCCCEeecccCHHHHHHHHHHHHHHHhCCC
Confidence 99853221 332221 245689999999999999999999998644
Q ss_pred CCCceEEEEEeecCCccCcHHHHHHcCCCCCCceEEEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCCCC-CC
Q 022137 148 KLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMP-HS 226 (302)
Q Consensus 148 ~~~~~i~~~~~~~EEg~~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p-~~ 226 (302)
.++++|.|+|+++||.+.|++.+..++. +.+..+.+ + ++|+|.+..+ ..|..+++|+++|+++|++.+ +.
T Consensus 163 ~~~g~I~~~ft~dEE~g~Ga~~l~~~~~--~~~~~~~i--~-gep~g~i~~~----~~g~~~~~I~v~Gk~aHa~~~~~~ 233 (410)
T TIGR01882 163 IKHGTIRVAFTPDEEIGRGAHKFDVKDF--NADFAYTV--D-GGPLGELEYE----TFSAAAAKITIQGNNVHPGTAKGK 233 (410)
T ss_pred CCCCCEEEEEECcccCCcCcchhhhhhc--CccEEEEe--C-CCCCCeEEEc----cccceEEEEEEEEEecCcccChHH
Confidence 4689999999999996578888765432 34544443 3 2577764332 358899999999999999965 57
Q ss_pred CCCHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 227 TIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 227 g~Nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
++||+..+.+++..+..... + ..++-+.+.+++| ..|.+|++|++.+|+|+.+.++.+++.++|+++++
T Consensus 234 g~nAi~~a~~~~~~l~~~~~----~-~~t~~~~g~i~~g-~i~giPd~a~l~~diR~~~~e~~e~i~~~i~~i~~ 302 (410)
T TIGR01882 234 MINAAQIAIDLHNLLPEDDR----P-EYTEGREGFFHLL-SIDGTVEEAKLHYIIRDFEKENFQERKELMKRIVE 302 (410)
T ss_pred HHHHHHHHHHHHHhcCCcCC----C-ccccceeEEEEEE-eEEEecCEEEEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 99999999988776654311 1 1111123344555 35669999999999999999999999999998875
No 50
>PRK05469 peptidase T; Provisional
Probab=100.00 E-value=1.2e-34 Score=271.47 Aligned_cols=249 Identities=16% Similarity=0.169 Sum_probs=192.0
Q ss_pred HHHHHHHHHHHhCCCCCcc----------hHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCC---CCcEEEEEEeccc
Q 022137 38 DWLVSVRRQIHENPELLFE----------EHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG---SRPVVVLRADMDA 104 (302)
Q Consensus 38 ~~~~~~~~~l~~ips~~~~----------E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~---~~~~i~l~~H~Dt 104 (302)
+++++.++++++|||++.+ |+++++||.++|+++|++....+..+||++.++++ ++|+|+|+|||||
T Consensus 2 ~~~~~~l~~~~~i~s~s~~~~~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~v~~~~~g~~~~~~~~i~l~~H~D~ 81 (408)
T PRK05469 2 DKLLERFLRYVKIDTQSDENSTTVPSTEGQWDLAKLLVEELKELGLQDVTLDENGYVMATLPANVDKDVPTIGFIAHMDT 81 (408)
T ss_pred chHHHHHHhhEEeecccCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeEEECCCeEEEEEecCCCCCCCCeEEEEEeccC
Confidence 4577889999999999976 89999999999999999744345678899999653 2599999999999
Q ss_pred CCCCCC---------------------CCCccccc--------cCCceec-------CCCcHHHHHHHHHHHHHHhcCCC
Q 022137 105 LPLQEL---------------------VEWEHKSK--------IDGKMHA-------CGHDVHTTMLLGAAKLIHQRKDK 148 (302)
Q Consensus 105 Vp~~~~---------------------~~w~~~~~--------~~g~l~g-------~G~kg~~a~~l~a~~~l~~~~~~ 148 (302)
||..+. ..|++++. .++.+|| .+|||+++++|+|+++|++.+..
T Consensus 82 vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~rG~~~lg~D~Kgglaa~l~a~~~l~~~~~~ 161 (408)
T PRK05469 82 APDFSGKNVKPQIIENYDGGDIALGDGNEVLSPAEFPELKNYIGQTLITTDGTTLLGADDKAGIAEIMTALEYLIAHPEI 161 (408)
T ss_pred CCCCCCCCCCCEEeccCCCcceecCCCceEechHhCchHHhccCCCEEEcCCCEeecccchHHHHHHHHHHHHHHhCCCC
Confidence 987541 22333221 1234565 55799999999999999987666
Q ss_pred CCceEEEEEeecCCccCcHHHHHHcCCCCCCceEEEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCC-CCCCC
Q 022137 149 LKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA-MPHST 227 (302)
Q Consensus 149 ~~~~i~~~~~~~EEg~~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~-~p~~g 227 (302)
++++|.|+|+++||.+.|++.++.+.. ..++.+.++. .+.+.+. ...+|..+++|+++|+++|++ .|+.|
T Consensus 162 ~~g~v~~~f~~dEE~g~Ga~~~~~~~~--~~~~~~~~~~---~~~g~~~----~~~~g~~~~~i~v~Gk~~Ha~~~p~~g 232 (408)
T PRK05469 162 KHGDIRVAFTPDEEIGRGADKFDVEKF--GADFAYTVDG---GPLGELE----YENFNAASAKITIHGVNVHPGTAKGKM 232 (408)
T ss_pred CCCCEEEEEecccccCCCHHHhhhhhc--CCcEEEEecC---CCcceEE----eccCceeEEEEEEeeecCCCCCCcccc
Confidence 789999999999995589988865432 2455554432 2445432 235688999999999999987 68999
Q ss_pred CCHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 228 IDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 228 ~Nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
+||+..+++++..|+++..+........+++++.|+|| |++|++.+|+|+.+.++.+++.++|+++++
T Consensus 233 ~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~g~i~gg------p~~~~i~~diR~~~~e~~e~i~~~i~~~~~ 300 (408)
T PRK05469 233 VNALLLAADFHAMLPADETPETTEGYEGFYHLTSIKGT------VEEAELSYIIRDFDREGFEARKALMQEIAK 300 (408)
T ss_pred cCHHHHHHHHHHhCCCCCCCCCCCCceEEEEEEEEEEc------cceEEEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 99999999999988865422211122345788888876 899999999999999999999999998875
No 51
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=100.00 E-value=7.5e-34 Score=269.87 Aligned_cols=245 Identities=18% Similarity=0.218 Sum_probs=192.8
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeeccCCceEEEEecC----CCCcEEEEEEecccCCCCCC--
Q 022137 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGS----GSRPVVVLRADMDALPLQEL-- 110 (302)
Q Consensus 37 ~~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~----~~~~~i~l~~H~DtVp~~~~-- 110 (302)
.+++++++++|++|||+|++|.++++||.++++++|++++.+ ..+|+++.+.+ +..|+|+|.|||||||.++.
T Consensus 9 ~~~~~~~l~~Lv~ips~S~~e~~~~~~l~~~~~~~G~~~~~d-~~gnvi~~~~~~~g~~~~~~v~l~gH~DtV~~~~~~~ 87 (485)
T PRK15026 9 PQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERD-QVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDT 87 (485)
T ss_pred HHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhCCCEEEEE-ecCeEEEEEcCCCCCCCCCEEEEEeeecccCCCCCCc
Confidence 467899999999999999999999999999999999998764 56788888642 23589999999999998653
Q ss_pred -CCCc---cc-cccCCceecCCC------cHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCCCCC
Q 022137 111 -VEWE---HK-SKIDGKMHACGH------DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGD 178 (302)
Q Consensus 111 -~~w~---~~-~~~~g~l~g~G~------kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~ 178 (302)
..|. |. .++||++||||. |++++++|+++ ++.+. .+++|.++|++||| |+.|++.+.. .. ..
T Consensus 88 ~~~w~~~P~~~~i~~~~l~g~Gt~lgaD~k~gva~~l~~l---~~~~~-~~~~i~~l~t~dEE~G~~ga~~l~~-~~-~~ 161 (485)
T PRK15026 88 VHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVL---ADENV-VHGPLEVLLTMTEEAGMDGAFGLQS-NW-LQ 161 (485)
T ss_pred cccCCCCCceEEEcCCEEEeCCccccCccHHHHHHHHHHH---HhCCC-CCCCEEEEEEcccccCcHhHHHhhh-cc-CC
Confidence 2574 43 247889999883 67888877665 44443 47899999999999 6789999855 32 34
Q ss_pred CceEEEeeccCCCCCccee--eec------------ccccceeeEEEEEEEe-cccCCC-CCCCCC-CHHHHHHHHHHHH
Q 022137 179 SEAIFGMHIDVGIPTGSIA--SIS------------GPHLAATSVFNVKVEG-RGGHAA-MPHSTI-DPILTASSVILAL 241 (302)
Q Consensus 179 ~d~~~~~~~~~~~~~~~~~--~~~------------~~~~~G~~~~~i~v~G-~~~Ha~-~p~~g~-Nai~~~~~~i~~l 241 (302)
.++++.+++. ..|.+. ..- ....+|..+++|+++| ++|||| .|+.|+ |||..+++++.++
T Consensus 162 ~~~~i~~e~~---~~g~l~~g~~G~~~~~~~~~~~r~~~~~g~~~~~i~v~Gl~ggHsG~~i~~g~~nAi~~la~~l~~~ 238 (485)
T PRK15026 162 ADILINTDSE---EEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGH 238 (485)
T ss_pred cCEEEEeCCC---CCCeEEEeCCCcceEEEEEEEEEEecCCCceEEEEEEECCCCcCChHHHCCCCccHHHHHHHHHHHh
Confidence 6788877542 222221 000 0012577899999999 999999 899999 9999999999985
Q ss_pred HHhhhhcCCCCCCeeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 242 QQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
.+ .++++++.|+||++.|+||++|++.+++|....+..+.+.+.+.+.++
T Consensus 239 ~~----------~~~~~v~~i~GG~~~NaIp~~a~a~i~~~~~~~~~~~~~~~~~~~~~~ 288 (485)
T PRK15026 239 AE----------ELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDALKSLVNTYQEILK 288 (485)
T ss_pred Hh----------hCCeEEEEEeCCCccCCCCCCcEEEEEEChhHHHHHHHHHHHHHHHHH
Confidence 42 268999999999999999999999999998888888888877766553
No 52
>PRK06156 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=271.92 Aligned_cols=257 Identities=16% Similarity=0.171 Sum_probs=190.8
Q ss_pred HhhHHHHHHHHHHHHhCCCCCc-----ch----HHHHHHHHHHHHhcCCCeeeccCCceEE-EEecCCCCcEEEEEEecc
Q 022137 34 QQDKDWLVSVRRQIHENPELLF-----EE----HNTSALIRRELDKLGIPYAYPVAKTGIV-AQIGSGSRPVVVLRADMD 103 (302)
Q Consensus 34 ~~~~~~~~~~~~~l~~ips~~~-----~E----~~~a~~l~~~l~~~g~~~~~~~~~~nvi-a~~~~~~~~~i~l~~H~D 103 (302)
+++++++++++++|++|||+++ +| ...++||.++|+++|++++.. .++++ +.+++.+.|+|+|+||||
T Consensus 42 ~~~~~~~~~~l~~lv~i~S~~~~~~~~~e~~~~~~~~~~l~~~l~~~G~~~~~~--~~~v~~~~~~g~~~~~l~l~gH~D 119 (520)
T PRK06156 42 LKYGAAAIESLRELVAFPTVRVEGVPQHENPEFIGFKKLLKSLARDFGLDYRNV--DNRVLEIGLGGSGSDKVGILTHAD 119 (520)
T ss_pred hhhHHHHHHHHHHhcCcCcccCCCCCccCCccHHHHHHHHHHHHHHCCCeEEec--CCeEEEEEecCCCCCeEEEEEecC
Confidence 3667899999999999999874 23 356899999999999998532 33344 666644458999999999
Q ss_pred cCCCCCCCCCcc-----cc----ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHH
Q 022137 104 ALPLQELVEWEH-----KS----KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHM 170 (302)
Q Consensus 104 tVp~~~~~~w~~-----~~----~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~ 170 (302)
|||.+. ..|.+ +| .+||++|||| ||++++++++|++.|++.+.+++++|.|+|++||| |+.|++++
T Consensus 120 vVp~~~-~~W~~~~~~~~Pf~~~~~~g~lyGRG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~ 198 (520)
T PRK06156 120 VVPANP-ELWVLDGTRLDPFKVTLVGDRLYGRGTEDDKGAIVTALYAMKAIKDSGLPLARRIELLVYTTEETDGDPLKYY 198 (520)
T ss_pred ccCCCC-ccCccCCccCCCCceEEECCEEEEcCcccchHHHHHHHHHHHHHHHcCCCCCceEEEEEecccccCchhHHHH
Confidence 999965 36765 43 3689999999 59999999999999998888888999999999999 67899999
Q ss_pred HHcCCCCCCceEEEee-------ccCC--------------------------CCCcce------eee------------
Q 022137 171 IKEGALGDSEAIFGMH-------IDVG--------------------------IPTGSI------ASI------------ 199 (302)
Q Consensus 171 ~~~~~~~~~d~~~~~~-------~~~~--------------------------~~~~~~------~~~------------ 199 (302)
+.++.. .+..+.++ .+++ ...+.+ .+.
T Consensus 199 ~~~~~~--~~~~~~~D~~~~~~~~E~~~~~~~i~~~~~~~~~~~~~l~~~~gG~~~n~ip~~a~~~~~~~~~~~~~~~~~ 276 (520)
T PRK06156 199 LERYTP--PDYNITLDAEYPVVTAEKGWGTIMATFPKRAADGKGAEIVAMTGGAFANQIPQTAVATLSGGDPAALAAALQ 276 (520)
T ss_pred HHhcCC--CCeEEeeCCCCceEEEecceEEEEEEecCcCCCCCceeEEEEEcCCcCCCCCCccEEEEecCCHHHHHHHHH
Confidence 887542 23322111 0100 000000 000
Q ss_pred -----cccccceee---------EEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhh------------------
Q 022137 200 -----SGPHLAATS---------VFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISR------------------ 247 (302)
Q Consensus 200 -----~~~~~~G~~---------~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~------------------ 247 (302)
...+++|.. |++|+++|+++|+++|+.|.|||..+++++..+++....
T Consensus 277 ~~~~~~~~~~~g~~~~~~~~~~~~~~I~v~Gk~aHsS~P~~G~NAI~~aa~ii~~L~~~l~~~~~~~~~~~i~~~~~~~~ 356 (520)
T PRK06156 277 AAAAAQVKRHGGGFSIDFKRDGKDVTITVTGKSAHSSTPESGVNPVTRLALFLQSLDGDLPHNHAADAARYINDLVGLDY 356 (520)
T ss_pred HHHHHHHhhcccCceEEEEEcCCeEEEEEEeEECCCCCCCCCccHHHHHHHHHHhccccccchhHHHHHHHHHHhhCCCC
Confidence 001123444 899999999999999999999999999999998752100
Q ss_pred --------cCC-CCCCeeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 248 --------EAD-PLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 248 --------~~~-~~~~~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
..+ ..+..+++++.|.+|. ++|++.+|+|++|+++.+++.++|+++++
T Consensus 357 ~g~~~g~~~~~~~~g~~t~~~~~I~gg~------~~~~l~iDiR~~p~~~~eev~~~I~~~i~ 413 (520)
T PRK06156 357 LGEKFGVAYKDDFMGPLTLSPTVVGQDD------KGTEVTVNLRRPVGKTPELLKGEIADALA 413 (520)
T ss_pred ccCcCCccccCCCccCcEEeeeEEEEeC------CeEEEEEEeeCCCCCCHHHHHHHHHHHHH
Confidence 001 1244578888888774 68999999999999999999999988764
No 53
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=9.4e-34 Score=265.91 Aligned_cols=244 Identities=18% Similarity=0.233 Sum_probs=191.6
Q ss_pred HHHHHHHHHHHHhC----------CCCCcchHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCC--CCcEEEEEEeccc
Q 022137 37 KDWLVSVRRQIHEN----------PELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG--SRPVVVLRADMDA 104 (302)
Q Consensus 37 ~~~~~~~~~~l~~i----------ps~~~~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~--~~~~i~l~~H~Dt 104 (302)
.+.+++++++|++| ||++++|.++++||.++|+++||++++. ...|++++++++ ++|+|+|.||+||
T Consensus 6 ~~~~~~~~~~l~~~~~~~~~g~~~~s~s~~e~~~a~~l~~~l~~~g~~~~~~-~~~nl~a~~~g~~~~~~~l~l~gH~Dt 84 (413)
T PRK09290 6 AERLWARLDELAKIGATPDGGVTRLALSPEDLQARDLFAEWMEAAGLTVRVD-AVGNLFGRLEGRDPDAPAVLTGSHLDT 84 (413)
T ss_pred HHHHHHHHHHHhcccCCCCCceeeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCCEEEEecCccC
Confidence 45667777777777 3788999999999999999999998864 568999999653 2589999999999
Q ss_pred CCCCCCCCCccccccCCceecCCCcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCCc------cCcHHHHHHcC----
Q 022137 105 LPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG------GAGAFHMIKEG---- 174 (302)
Q Consensus 105 Vp~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg------~~G~~~~~~~~---- 174 (302)
||.+. .+ ++|+++|++++++++|++.+..++++|.|++++|||. ..|++.+++..
T Consensus 85 Vp~~g------------~~---d~k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~G~~~~~~~~~~~~ 149 (413)
T PRK09290 85 VPNGG------------RF---DGPLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGSRFGPAMLGSRVFTGALTPED 149 (413)
T ss_pred CCCCC------------Cc---CCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccccccCccccHHHHHcccCHHH
Confidence 99742 22 3478999999999999988877899999999999995 25787765321
Q ss_pred -------------------CCCCCceEEEe-------------eccC---CCCCcceeeecccccceeeEEEEEEEeccc
Q 022137 175 -------------------ALGDSEAIFGM-------------HIDV---GIPTGSIASISGPHLAATSVFNVKVEGRGG 219 (302)
Q Consensus 175 -------------------~~~~~d~~~~~-------------~~~~---~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~ 219 (302)
.+ +.|++++. |++. .+|++.. ..+..+++|..+++|+++|+++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~-~~d~~i~~~~ept~~~~~~~~~~~~~~~~e~~~~~-~~i~~~~kG~~~~~i~v~Gk~a 227 (413)
T PRK09290 150 ALALRDADGVSFAEALAAIGY-DGDEAVGAARARRDIKAFVELHIEQGPVLEAEGLP-IGVVTGIVGQRRYRVTFTGEAN 227 (413)
T ss_pred HHhccCCCCCCHHHHHHHcCC-ChhhccccccCCCCccEEEEEEeccCHHHHHCCCc-EEEEeeeeccEEEEEEEEEECC
Confidence 11 23444321 1110 0222221 2244678999999999999999
Q ss_pred CCC-CC-CCCCCHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEEEecC-CcCcccCCeEEEEEEEecCChhhHHHHHHHH
Q 022137 220 HAA-MP-HSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGG-TAFNIIPPFVEFGGTLRSLTTEGLYQLQKRL 296 (302)
Q Consensus 220 Ha~-~p-~~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~gg-~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i 296 (302)
|++ .| +.|+|||..+++++.+|+++..+. ....+++++.+++| .+.|+||++|++.+|+|+.|.++.+++.++|
T Consensus 228 Has~~P~~~g~NAI~~~~~~i~~l~~l~~~~---~~~~~~~~g~i~~g~~~~NvIP~~a~~~~diR~~p~e~~e~v~~~i 304 (413)
T PRK09290 228 HAGTTPMALRRDALLAAAEIILAVERIAAAH---GPDLVATVGRLEVKPNSVNVIPGEVTFTLDIRHPDDAVLDALVAEL 304 (413)
T ss_pred CCCCCCchhccCHHHHHHHHHHHHHHHHHhc---CCCeEEEEEEEEEcCCCCeEECCEEEEEEEEeCCCHHHHHHHHHHH
Confidence 998 68 579999999999999998865322 12468999999975 7999999999999999999999999999999
Q ss_pred HHhhh
Q 022137 297 KEFDR 301 (302)
Q Consensus 297 ~~~~~ 301 (302)
+++++
T Consensus 305 ~~~~~ 309 (413)
T PRK09290 305 RAAAE 309 (413)
T ss_pred HHHHH
Confidence 98875
No 54
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=100.00 E-value=3.1e-33 Score=263.98 Aligned_cols=251 Identities=16% Similarity=0.151 Sum_probs=186.6
Q ss_pred HHHHHHHHHHHhCCCCCcc------------hHHHHHHHHHHHHhcCCCeeeccCCceEEEE--ecCCCCcEEEEEEecc
Q 022137 38 DWLVSVRRQIHENPELLFE------------EHNTSALIRRELDKLGIPYAYPVAKTGIVAQ--IGSGSRPVVVLRADMD 103 (302)
Q Consensus 38 ~~~~~~~~~l~~ips~~~~------------E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~--~~~~~~~~i~l~~H~D 103 (302)
+++++++++|++|||++.+ +.++++|+.++|+++|++++.. .|+.+. ++++ .|+|+|+||+|
T Consensus 2 ~~~i~ll~~Lv~ipS~s~~~~p~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~---~~~~~~~~~~~~-~~~l~l~gH~D 77 (447)
T TIGR01887 2 DEILEDLKELIRIDSVEDLEEAKEGAPFGEGPKKALDKFLELAKRDGFTTENV---DNYAGYAEYGQG-EEYLGILGHLD 77 (447)
T ss_pred hHHHHHHHHhcCcCcCCCCCCCCCCCCcchhHHHHHHHHHHHHHHcCceEEEe---cCceEEEEeCCC-CCeEEEEeecC
Confidence 4678899999999998832 3789999999999999998742 243333 3322 47999999999
Q ss_pred cCCCCCCCCCc---ccc-ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCC
Q 022137 104 ALPLQELVEWE---HKS-KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGA 175 (302)
Q Consensus 104 tVp~~~~~~w~---~~~-~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~ 175 (302)
|||.++ .|. |.+ .+||++|||| |||++++++.|+++|++.+.+++++|.|+|++||| |+.|+++++++..
T Consensus 78 ~Vp~~~--~W~~~Pf~~~~~~g~lyGRGa~D~KG~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~ 155 (447)
T TIGR01887 78 VVPAGD--GWTSPPFEAEIKDGRIYGRGTLDDKGPTIAALYAMKILKELGLKLKKKIRFIFGTDEETGWACIDYYFEHEE 155 (447)
T ss_pred CCCCCC--CCcCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcHhHHHHHHhcC
Confidence 999875 574 442 4689999999 59999999999999999888889999999999999 6679988887632
Q ss_pred CCC----Cc----eEEEee---------------------ccCCCCCcceee--ecccccc-------------------
Q 022137 176 LGD----SE----AIFGMH---------------------IDVGIPTGSIAS--ISGPHLA------------------- 205 (302)
Q Consensus 176 ~~~----~d----~~~~~~---------------------~~~~~~~~~~~~--~~~~~~~------------------- 205 (302)
... .| ++++.. ...++|++.+.. ....+++
T Consensus 156 ~~~~~~~~d~~~~~~~~e~g~~~~~~~v~g~~~~~~~i~~~~~Ge~tn~~p~~a~~~v~~~~~~~~~~~~~~~~~~~~~~ 235 (447)
T TIGR01887 156 APDIGFTPDAEFPIIYGEKGIVTLEISFKDDTEGDVVLESFKAGEAFNMVPDHATAVISGKELLEVEKEKFVFFIAKELE 235 (447)
T ss_pred CCCEEEeCCCCcceEEEecCeEEEEEEeccCCCCceeEEEEeCCCcCCccCcceEEEEeccchhHHHHHHHHHhhhcCcc
Confidence 110 12 233210 012345554310 0011222
Q ss_pred eee-----EEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHH--Hhhhh---------------------cC-CCCCCee
Q 022137 206 ATS-----VFNVKVEGRGGHAAMPHSTIDPILTASSVILALQ--QLISR---------------------EA-DPLQSLV 256 (302)
Q Consensus 206 G~~-----~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~--~~~~~---------------------~~-~~~~~~~ 256 (302)
|.. +++|+++|+++||+.|+.|.||++.+++++.++. +.... .. ...+.++
T Consensus 236 g~~~~~~~~~~i~v~G~~aHss~p~~G~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t 315 (447)
T TIGR01887 236 GSFEVNDGTATITLEGKSAHGSAPEKGINAATYLALFLAQLNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDVSGDLT 315 (447)
T ss_pred eEEEecCCEEEEEEEeeecccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCccccCCCcccCCCcCCcE
Confidence 555 7999999999999999999999999999999986 21100 00 1124578
Q ss_pred EEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHh
Q 022137 257 LSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEF 299 (302)
Q Consensus 257 ~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~ 299 (302)
+|++.|++| +|++|++.+|+|++|+++.+++.+++.+.
T Consensus 316 ~nvg~I~~g-----~p~~~~~~~d~R~~p~~~~e~~~~~i~~~ 353 (447)
T TIGR01887 316 MNVGVIDYE-----NAEAGLIGLNVRYPVGNDPDTMLKNELAK 353 (447)
T ss_pred EEEEEEEEe-----CCcEEEEEEEEecCCCCCHHHHHHHHHHH
Confidence 999999988 39999999999999999999877776644
No 55
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=3.6e-33 Score=261.91 Aligned_cols=243 Identities=16% Similarity=0.137 Sum_probs=190.8
Q ss_pred HHHHHHHHHHhCC----------CCCcchHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCC-C-CcEEEEEEecccCC
Q 022137 39 WLVSVRRQIHENP----------ELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG-S-RPVVVLRADMDALP 106 (302)
Q Consensus 39 ~~~~~~~~l~~ip----------s~~~~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~-~-~~~i~l~~H~DtVp 106 (302)
++++.+.+|-++. +-+++|.++++||.++|+++|++++.+ ..+|+++++++. + +|+|+|.||+||||
T Consensus 11 ~~~~~~~~~~~~~~~~~~g~~r~~~~~~e~~~~~~l~~~l~~~G~~v~~~-~~gNl~a~~~g~~~~~~~l~~~~H~DtVp 89 (414)
T PRK12891 11 RLWASLERMAQIGATPKGGVCRLALTDGDREARDLFVAWARDAGCTVRVD-AMGNLFARRAGRDPDAAPVMTGSHADSQP 89 (414)
T ss_pred HHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCCCEEEEC-CCCCEEEEecCCCCCCCeEEEEecccCCC
Confidence 4555555555542 234578999999999999999998875 567999999664 2 48999999999999
Q ss_pred CCCCCCCccccccCCceecCCCcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCCcc------CcHHHH----------
Q 022137 107 LQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG------AGAFHM---------- 170 (302)
Q Consensus 107 ~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~------~G~~~~---------- 170 (302)
.+. . .+||+|++++|+++++|++.+..++++|.|++++|||++ .|++.+
T Consensus 90 ~gg------------~---~D~k~Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~~g~~~~~~~~ 154 (414)
T PRK12891 90 TGG------------R---YDGIYGVLGGLEVVRALNDAGIETERPVDVVIWTNEEGSRFAPSMVGSGVFFGVYPLEYLL 154 (414)
T ss_pred CCc------------c---ccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEecccccCcCCcccccHHHHhCCCCHHHHH
Confidence 752 1 267899999999999999999899999999999999963 477533
Q ss_pred --------------HHcCCC-------CCCceEEEeeccCC---CCCcceeeecccccceeeEEEEEEEecccCCC-CCC
Q 022137 171 --------------IKEGAL-------GDSEAIFGMHIDVG---IPTGSIASISGPHLAATSVFNVKVEGRGGHAA-MPH 225 (302)
Q Consensus 171 --------------~~~~~~-------~~~d~~~~~~~~~~---~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~-~p~ 225 (302)
.+.|+. .+.++.+.+|.+++ ++.+. ...+..+++|..+++|+++|+++|++ .|+
T Consensus 155 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~e~h~e~g~vle~~~~-~~~iv~~~kG~~~~~v~v~Gk~aHa~~~P~ 233 (414)
T PRK12891 155 SRRDDTGRTLGEHLARIGYAGAEPVGGYPVHAAYELHIEQGAILERAGK-TIGVVTAGQGQRWYEVTLTGVDAHAGTTPM 233 (414)
T ss_pred hccCCCCCCHHHHHHHCCCCcccccccCCCCEEEEEEeCCCHHHHHCCC-cEEEEeeccCcEEEEEEEEeECCCCCCCCc
Confidence 233321 12345555666553 12232 12234678999999999999999998 686
Q ss_pred -CCCCHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEEEecC-CcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 226 -STIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGG-TAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 226 -~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~gg-~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
.|.|||..+++++..|+++.... ....++|++.|+|| .+.|+||++|++.+|+|+.|.++.+++.++|+++++
T Consensus 234 ~~g~nAI~~aa~~i~~l~~~~~~~---~~~~t~~vg~I~gG~~~~NvVP~~~~~~~diR~~~~e~~e~v~~~i~~~~~ 308 (414)
T PRK12891 234 AFRRDALVGAARMIAFLDALGRRD---APDARATVGMIDARPNSRNTVPGECFFTVEFRHPDDAVLDRLDAALRAELA 308 (414)
T ss_pred ccccCHHHHHHHHHHHHHHHHHhc---CCCeEEEEEEEEeeCCCcceECCeEEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 58999999999999999874321 13469999999997 699999999999999999999999999999998875
No 56
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=4e-33 Score=261.73 Aligned_cols=233 Identities=19% Similarity=0.208 Sum_probs=180.8
Q ss_pred hCCCCCcchHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCC--CCcEEEEEEecccCCCCCCCCCccccccCCceecC
Q 022137 49 ENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG--SRPVVVLRADMDALPLQELVEWEHKSKIDGKMHAC 126 (302)
Q Consensus 49 ~ips~~~~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~--~~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~g~ 126 (302)
.+||.+++|.++++||.++|++.|+++++. ...|+++++++. ++|+|+|.||+||||.+ |. .
T Consensus 29 ~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nlia~~~g~~~~~~~l~~~~H~DtVp~~------------g~---~ 92 (414)
T PRK12890 29 TRLALSDEERAARALLAAWMRAAGLEVRRD-AAGNLFGRLPGRDPDLPPLMTGSHLDTVPNG------------GR---Y 92 (414)
T ss_pred eeccCCHHHHHHHHHHHHHHHHCCCEEEEc-CCCcEEEEeCCCCCCCCEEEEeCcccCCCCC------------CC---c
Confidence 445789999999999999999999999874 568999999754 35899999999999974 22 2
Q ss_pred CCcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCCc------cCcHHHHHHc------------------------CCC
Q 022137 127 GHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG------GAGAFHMIKE------------------------GAL 176 (302)
Q Consensus 127 G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg------~~G~~~~~~~------------------------~~~ 176 (302)
++|++++++|++++.|++.+..++++|.|++++|||+ +.|++.+... +..
T Consensus 93 D~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 172 (414)
T PRK12890 93 DGILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRFGPSMIGSRALAGTLDVEAVLATRDDDGTTLAEALRRIGGD 172 (414)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEecccccccCCccccHHHHHcccChHHHHhccCCCCCCHHHHHHHcCCC
Confidence 5678999999999999988878899999999999994 2566555332 110
Q ss_pred C-----------CCceEEEeeccCCC---CCcceeeecccccceeeEEEEEEEecccCCC-CCCC-CCCHHHHHHHHHHH
Q 022137 177 G-----------DSEAIFGMHIDVGI---PTGSIASISGPHLAATSVFNVKVEGRGGHAA-MPHS-TIDPILTASSVILA 240 (302)
Q Consensus 177 ~-----------~~d~~~~~~~~~~~---~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~-~p~~-g~Nai~~~~~~i~~ 240 (302)
. ..+..+.+|.+++. +.+. ...+..+++|..|++|+++|+++|++ .|+. +.|||..+++++.+
T Consensus 173 ~~~~~~~~~ep~~~~~~~~~h~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~v~Gk~aHas~~P~~~g~nAI~~~~~~i~~ 251 (414)
T PRK12890 173 PDALPGALRPPGAVAAFLELHIEQGPVLEAEGL-PIGVVTAIQGIRRQAVTVEGEANHAGTTPMDLRRDALVAAAELVTA 251 (414)
T ss_pred hhhccccccCCCCccEEEEEeeCcCHHHHhCCC-ceEEEEeecCcEEEEEEEEEECCCCCcCChhhccCHHHHHHHHHHH
Confidence 0 01122222222110 0111 12234578999999999999999998 5854 58999999999999
Q ss_pred HHHhhhhcCCCCCCeeEEEEEEecC-CcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 241 LQQLISREADPLQSLVLSVTYVRGG-TAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 241 l~~~~~~~~~~~~~~~~~~~~i~gg-~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
|+++..+.. ...+++++.|++| .+.|+||++|++.+|+|+.|.++.+++.++|+++++
T Consensus 252 l~~~~~~~~---~~~~~~~g~i~~gg~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~ 310 (414)
T PRK12890 252 MERRARALL---HDLVATVGRLDVEPNAINVVPGRVVFTLDLRSPDDAVLEAAEAALLAELE 310 (414)
T ss_pred HHHHHHhcC---CCeEEEEEEEEECCCCceEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 998754322 4578899999974 799999999999999999999999999999988764
No 57
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=100.00 E-value=2.5e-32 Score=260.48 Aligned_cols=247 Identities=17% Similarity=0.205 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCC----CCcEEEEEEecccCCCCCC--
Q 022137 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG----SRPVVVLRADMDALPLQEL-- 110 (302)
Q Consensus 37 ~~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~----~~~~i~l~~H~DtVp~~~~-- 110 (302)
.+++++++++|++|||++++|.++++||.++|+++|++++++ ..+|+++.+++. ..|+|+|.||+||||.+..
T Consensus 3 ~~~~~~~l~~l~~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~n~~~~~~~~~g~~~~~~l~l~~HlDtV~~~~~~~ 81 (477)
T TIGR01893 3 PSRVFKYFEEISKIPRPSKNEKEVSNFIVNWAKKLGLEVKQD-EVGNVLIRKPATPGYENHPPIVLQGHMDMVCEKNEDS 81 (477)
T ss_pred HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHcCCeEEEe-CCCeEEEEEcCCCCCCCCCeEEEEeeccccCCCCCCC
Confidence 357888999999999999999999999999999999998764 568999998532 2488999999999998642
Q ss_pred -CCCc---ccc-ccCCceecCCC------cHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCCCCC
Q 022137 111 -VEWE---HKS-KIDGKMHACGH------DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGD 178 (302)
Q Consensus 111 -~~w~---~~~-~~~g~l~g~G~------kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~ 178 (302)
..|. |.+ .+||++||||. |++++++|++++. .+ .++++|.++|++||| ++.|++.+..... .
T Consensus 82 ~~~w~~~p~~~~~~~~~i~GrG~~lg~D~k~gva~~l~~~~~---~~-~~~~~i~~~~~~dEE~g~~Gs~~l~~~~~--~ 155 (477)
T TIGR01893 82 LHDFEKDPIELIIDGDWLKARGTTLGADNGIGVAMGLAILED---NN-LKHPPLELLFTVDEETGMDGALGLDENWL--S 155 (477)
T ss_pred CCCCCCCCeEEEEeCCEEEECCccccccccHHHHHHHHHHhc---CC-CCCCCEEEEEEeccccCchhhhhcChhhc--C
Confidence 3564 433 46899999983 6888888887654 23 356799999999999 5679999865432 2
Q ss_pred CceEEEeeccC------CCCCcc-e--eeecc--cccceeeEEEEEEEe-cccCCC-CCCCC-CCHHHHHHHHHHHHHHh
Q 022137 179 SEAIFGMHIDV------GIPTGS-I--ASISG--PHLAATSVFNVKVEG-RGGHAA-MPHST-IDPILTASSVILALQQL 244 (302)
Q Consensus 179 ~d~~~~~~~~~------~~~~~~-~--~~~~~--~~~~G~~~~~i~v~G-~~~Ha~-~p~~g-~Nai~~~~~~i~~l~~~ 244 (302)
.+.++..+... +.+.+. . ...+. ..++|..+++|+++| +++||| .|+.+ .||+..+++++.++++.
T Consensus 156 ~~~~~~~d~~~~~~~~~g~~~~~~~~~~~e~~~e~~~kG~~~~~i~~~G~~~~Hsg~~p~~~r~nAi~~aa~~i~~l~~~ 235 (477)
T TIGR01893 156 GKILINIDSEEEGEFIVGCAGGRNVDITFPVKYEKFTKNEEGYQISLKGLKGGHSGADIHKGRANANKLMARVLNELKEN 235 (477)
T ss_pred CcEEEEecCCCCCeEEEECCCCeeEEEEEEEEEEecCCCceEEEEEEeCcCCCcCccccCCCCcCHHHHHHHHHHhhhhc
Confidence 23333322100 112211 0 00011 114799999999999 999998 68888 59999999999999875
Q ss_pred hhhcCCCCCCeeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhh
Q 022137 245 ISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFD 300 (302)
Q Consensus 245 ~~~~~~~~~~~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~ 300 (302)
. ..+++.+.||.+.|+||++|++.+|+|......++.+.+.+.+.+
T Consensus 236 ~----------~~~v~~~~gg~~~N~ip~~~~~~~diR~~~~~~l~~~~~~~~~~~ 281 (477)
T TIGR01893 236 L----------NFRLSDIKGGSKRNAIPREAKALIAIDENDVKLLENLVKNFQSKF 281 (477)
T ss_pred C----------CeEEEEEeCCCcccccCCceEEEEEEChhHHHHHHHHHHHHHHHH
Confidence 2 267888899999999999999999999888888888877776654
No 58
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=100.00 E-value=1.7e-31 Score=249.66 Aligned_cols=230 Identities=19% Similarity=0.263 Sum_probs=182.4
Q ss_pred CCCcchHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCC-C-CcEEEEEEecccCCCCCCCCCccccccCCceecCCCc
Q 022137 52 ELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG-S-RPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHD 129 (302)
Q Consensus 52 s~~~~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~-~-~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~g~G~k 129 (302)
|++++|.++++||.++|+++|++++.+ ..+|++++++++ + +|+|+|.||+||||.+ |+.+|+
T Consensus 25 ~~~~~e~~~~~~l~~~~~~~G~~~~~~-~~~nl~a~~~g~~~~~~~l~~~~H~DtV~~g------------g~~dg~--- 88 (401)
T TIGR01879 25 ALSPEDREAQDLFKKRMRAAGLEVRFD-EVGNLIGRKEGTEPPLEVVLSGSHIDTVVNG------------GNFDGQ--- 88 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEe-cCCcEEEEecCCCCCCCEEEEecccccCCCC------------CccCCH---
Confidence 346789999999999999999998764 568999999754 2 4899999999999974 344443
Q ss_pred HHHHHHHHHHHHHHhcCCCCCceEEEEEeecCCc------cCcHHHHHHcCC------C---------------------
Q 022137 130 VHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG------GAGAFHMIKEGA------L--------------------- 176 (302)
Q Consensus 130 g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg------~~G~~~~~~~~~------~--------------------- 176 (302)
.|++++|+++++|++.+..++++|.|++++|||+ +.|++.+..... +
T Consensus 89 ~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~ 168 (401)
T TIGR01879 89 LGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGLANPEDVRNICDAKGISFAEAMKACGPDLPN 168 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCcccccccHHHHhcccchhHHHhCcCCCCCCHHHHHHHcCCCccc
Confidence 4899999999999999988999999999999995 368877754210 0
Q ss_pred ------CCCceEEEeeccCCC---CCcceeeecccccceeeEEEEEEEecccCCC-CCC-CCCCHHHHHHHHHHHHHHhh
Q 022137 177 ------GDSEAIFGMHIDVGI---PTGSIASISGPHLAATSVFNVKVEGRGGHAA-MPH-STIDPILTASSVILALQQLI 245 (302)
Q Consensus 177 ------~~~d~~~~~~~~~~~---~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~-~p~-~g~Nai~~~~~~i~~l~~~~ 245 (302)
.++++.+.+|++++. +.|. ...+..+++|..|++|+++|+++|++ .|+ .+.||+..+++++.+++++.
T Consensus 169 ~~~~~~~~~~~~~e~Hieqg~~l~~~g~-~~~v~~~~~G~~~~~i~v~G~~aHa~~~p~~~g~nAi~~aa~~i~~l~~l~ 247 (401)
T TIGR01879 169 QPLRPRGDIKAYVELHIEQGPVLESNGQ-PIGVVNAIAGQRWYKVTLNGESNHAGTTPMSLRRDPLVAASRIIHQVEEKA 247 (401)
T ss_pred ccccccccccEEEEEEEcCCcChhhCCC-eEEEEEEecCcEEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHH
Confidence 012345555655432 1222 12345678999999999999999998 454 57999999999999999875
Q ss_pred hhcCCCCCCeeEEEEEEecC-CcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 246 SREADPLQSLVLSVTYVRGG-TAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 246 ~~~~~~~~~~~~~~~~i~gg-~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
.+. ..+.+.+++.|++| .+.|+||++|++.+|+|+.|.++.+++.++|+++++
T Consensus 248 ~~~---~~~~~~~vg~i~~g~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~~~ 301 (401)
T TIGR01879 248 KRM---GDPTVGTVGKVEARPNGVNVIPGKVTFTLDLRHTDAAVLRDFTQQLENDIK 301 (401)
T ss_pred Hhc---CCCeEEEEEEEEecCCceEEECCEEEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 432 13357899999985 689999999999999999999999999999988774
No 59
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=99.98 E-value=5e-30 Score=239.72 Aligned_cols=244 Identities=15% Similarity=0.165 Sum_probs=189.5
Q ss_pred HHHHHHHHHHHhCC-CC---------CcchHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCCC--CcEEEEEEecccC
Q 022137 38 DWLVSVRRQIHENP-EL---------LFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGS--RPVVVLRADMDAL 105 (302)
Q Consensus 38 ~~~~~~~~~l~~ip-s~---------~~~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~--~~~i~l~~H~DtV 105 (302)
+++++.+.+|.++. .+ |..+.++++||.+||+++|+++.. |..+|+++++++.. .|+|++.+|||||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~g~~R~~~s~~~~~a~~~~~~~~~~~Gl~v~~-D~~gN~~~~~~g~~~~~~~i~~gsHlDtv 81 (406)
T TIGR03176 3 KHFRQAIEELSSFGADPAGGMTRLLYSPEWLAAQQQFKKRMAESGLETRF-DDVGNLYGRLVGTEFPEETILTGSHIDTV 81 (406)
T ss_pred HHHHHHHHHHhccCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCEEEE-cCCCcEEEEecCCCCCCCeEEEeccccCC
Confidence 34556666666652 22 235799999999999999999875 46789999997652 4899999999999
Q ss_pred CCCCCCCCccccccCCceecCCCcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCCc------cCcHHHHHHc------
Q 022137 106 PLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG------GAGAFHMIKE------ 173 (302)
Q Consensus 106 p~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg------~~G~~~~~~~------ 173 (302)
|.+. ..||. .|+++.|++++.|++.+..++++|.++++.+||| ..|++.+...
T Consensus 82 ~~gG--------~~dg~-------~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~g~~~~~~~ 146 (406)
T TIGR03176 82 VNGG--------NLDGQ-------FGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKNIFGLAKPEDV 146 (406)
T ss_pred CCCC--------ccCch-------hhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHHHhCCCCHHHH
Confidence 9863 23455 3999999999999999899999999999999996 3566655410
Q ss_pred ------------------CC--------CCCCceEEEeeccCCCC---CcceeeecccccceeeEEEEEEEecccCCCCC
Q 022137 174 ------------------GA--------LGDSEAIFGMHIDVGIP---TGSIASISGPHLAATSVFNVKVEGRGGHAAMP 224 (302)
Q Consensus 174 ------------------~~--------~~~~d~~~~~~~~~~~~---~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p 224 (302)
|+ ..++++.+.+|.+++.- .+.. ..+..+.+|..+++|+++|+++|+|.|
T Consensus 147 ~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~elHieqG~~Le~~g~~-igiv~~~~G~~~~~v~v~GkaaHag~~ 225 (406)
T TIGR03176 147 RTIEDAKGIKFVDAMHACGFDLRKAPTVRDDIKAFVELHIEQGCVLESEGQS-IGVVNAIVGQRRYTVNLKGEANHAGTT 225 (406)
T ss_pred HhCcCCCCCCHHHHHHHcCCCcccccccccccceEEEEEECCCcchHHCCCe-EEEEeecccceEEEEEEEEECCCCCCC
Confidence 00 01356788889865422 2221 223356789999999999999999965
Q ss_pred CC--CCCHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEEEec-CCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 225 HS--TIDPILTASSVILALQQLISREADPLQSLVLSVTYVRG-GTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 225 ~~--g~Nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~g-g~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
.. +.||+..+++++..+.++..+ .....++|++.|++ |.+.|+||++|++.+|+|..+.++.+++.++|++.++
T Consensus 226 p~~~r~dAi~aaa~~i~~l~~~~~~---~~~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR~~~~~~~e~v~~~i~~~i~ 302 (406)
T TIGR03176 226 PMSYRRDTVYAFSRICTQSIERAKE---IGDPLVLTFGKVEPVPNTVNVVPGETTFTIDCRHTDAAVLRNFTKELENDMK 302 (406)
T ss_pred CcccccCHHHHHHHHHHHHHHHHHh---cCCCcEEEEEEEEEcCCceEEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 44 489999999999999886432 22346899999994 7899999999999999999999999988888877664
No 60
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=99.97 E-value=7.2e-30 Score=248.21 Aligned_cols=247 Identities=16% Similarity=0.160 Sum_probs=192.6
Q ss_pred hHHHHHHHHHHHHhCCCCC-------------cchHHHHHHHHHHHHhcCCC-eeeccCCceEEEEecCC--CCcEEEEE
Q 022137 36 DKDWLVSVRRQIHENPELL-------------FEEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQIGSG--SRPVVVLR 99 (302)
Q Consensus 36 ~~~~~~~~~~~l~~ips~~-------------~~E~~~a~~l~~~l~~~g~~-~~~~~~~~nvia~~~~~--~~~~i~l~ 99 (302)
..+++++.+..|.+++.|+ ..+.++++|+.+||+++|++ ++. |..+|+++++++. +.|+|++.
T Consensus 179 ~~~r~~~~l~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~~~~~~~~~Gl~~v~~-D~~gNv~~~~~g~~~~~p~v~~g 257 (591)
T PRK13799 179 IGADVMDWAEDIAAHSDPGYADEGALTCTYLSDAHRACANQISDWMRDAGFDEVEI-DAVGNVVGRYKAADDDAKTLITG 257 (591)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCCeEeE-CCCCCEEEEcCCCCCCCCeEEEe
Confidence 3456777888888886422 23579999999999999999 765 5679999999664 36899999
Q ss_pred EecccCCCCCCCCCccccccCCceecCCCcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCCcc------CcHHHHH--
Q 022137 100 ADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG------AGAFHMI-- 171 (302)
Q Consensus 100 ~H~DtVp~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~------~G~~~~~-- 171 (302)
+|+||||.+ |+.+|+ .|++++|++++.|++.+..++++|.++..++|||. .|++.+.
T Consensus 258 SHlDTV~~g------------G~~DG~---~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~EEg~rF~~~~~GS~~~~G~ 322 (591)
T PRK13799 258 SHYDTVRNG------------GKYDGR---EGIFLAIACVKELHEQGERLPFHFEVIAFAEEEGQRFKATFLGSGALIGD 322 (591)
T ss_pred ccccccCCC------------CccccH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCccCCCccccchHHHhCC
Confidence 999999864 666676 59999999999999999999999999999999962 4555554
Q ss_pred ------H----cCC----------C------------CCCceEEEeeccCCCC---CcceeeecccccceeeEEEEEEEe
Q 022137 172 ------K----EGA----------L------------GDSEAIFGMHIDVGIP---TGSIASISGPHLAATSVFNVKVEG 216 (302)
Q Consensus 172 ------~----~~~----------~------------~~~d~~~~~~~~~~~~---~~~~~~~~~~~~~G~~~~~i~v~G 216 (302)
+ +|. + .++++.+.+|++++.- .+. ...+..+++|..+++|+|+|
T Consensus 323 ~~~~~~~~~d~~G~~~~~~l~~~g~~~~~~~~~~~~~~~~~a~~ElHIEQgp~Le~~~~-~igvV~g~~G~~~~~Itv~G 401 (591)
T PRK13799 323 FNMELLDIKDADGISLREAIQHAGHCIDAIPKIARDPADVLGFIEVHIEQGPVLLELDI-PLGIVTSIAGSARYICEFIG 401 (591)
T ss_pred ChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCC-cEEEEeeeccceEEEEEEEE
Confidence 1 111 0 1456788888877511 111 12234567899999999999
Q ss_pred cccCCCC-CC-CCCCHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEEEecC-CcCcccCCeEEEEEEEecCChhhHHHHH
Q 022137 217 RGGHAAM-PH-STIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGG-TAFNIIPPFVEFGGTLRSLTTEGLYQLQ 293 (302)
Q Consensus 217 ~~~Ha~~-p~-~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~gg-~~~n~iP~~~~~~~diR~~~~~~~~~v~ 293 (302)
+++|+|. |. .+.||+..+++++..++++..+ .+....+.+++.|+++ .+.|+||++|++.+|+|..+.++.+.+.
T Consensus 402 kaaHag~~Pm~~r~dAi~aaa~ii~~l~~~~~~--~~~~~~v~tVG~I~~~~ga~NvIP~~a~~~~DiR~~~~e~~e~l~ 479 (591)
T PRK13799 402 MASHAGTTPMDMRKDAAAAAAEIALYIEKRAAQ--DQHASLVATMGQLNVPSGSTNVIPGRCQFSLDIRAATDEIRDAAV 479 (591)
T ss_pred ECCCCCCCChhhchhHHHHHHHHHHHHHHHHHh--cCCCCcEEEEEEEEecCCCCceECCEEEEEEEeeCCCHHHHHHHH
Confidence 9999994 64 5899999999999999987543 2223357889999863 4899999999999999999999999887
Q ss_pred HHHHHhhh
Q 022137 294 KRLKEFDR 301 (302)
Q Consensus 294 ~~i~~~~~ 301 (302)
+++++.++
T Consensus 480 ~~i~~~i~ 487 (591)
T PRK13799 480 ADILAEIA 487 (591)
T ss_pred HHHHHHHH
Confidence 77666553
No 61
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=99.97 E-value=1.5e-29 Score=246.05 Aligned_cols=244 Identities=13% Similarity=0.112 Sum_probs=188.1
Q ss_pred HHHHHHHHHHHHhCCCCC-------------cchHHHHHHHHHHHHhcCC-CeeeccCCceEEEEecCC-C-CcEEEEEE
Q 022137 37 KDWLVSVRRQIHENPELL-------------FEEHNTSALIRRELDKLGI-PYAYPVAKTGIVAQIGSG-S-RPVVVLRA 100 (302)
Q Consensus 37 ~~~~~~~~~~l~~ips~~-------------~~E~~~a~~l~~~l~~~g~-~~~~~~~~~nvia~~~~~-~-~~~i~l~~ 100 (302)
.+++++.+..|.+|+.+. ..+.++++||.+||+++|+ ++.. +..+|+++++++. + .|+|++.+
T Consensus 180 ~~r~~~~~~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~l~~~~~~~Gl~~v~~-D~~GNl~~~~~g~~~~~~~v~~gs 258 (591)
T PRK13590 180 GNDVWDWAERLAAHSDPGYAEKGQLTVTYLTDAHRACAQQISHWMRDCGFDEVHI-DAVGNVVGRYKGSTPQAKRLLTGS 258 (591)
T ss_pred HHHHHHHHHHHhcccCCCCCCCCceeeeeCCHHHHHHHHHHHHHHHHcCCCeeeE-CCCCCEEEEecCCCCCCCeEEEec
Confidence 356677778888886633 2457999999999999999 7654 5679999999664 3 48999999
Q ss_pred ecccCCCCCCCCCccccccCCceecCCCcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCCc------cCcHHH-----
Q 022137 101 DMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG------GAGAFH----- 169 (302)
Q Consensus 101 H~DtVp~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg------~~G~~~----- 169 (302)
||||||.+ |+.+|+ +|++++|++++.|++.+..++++|.|+++++||| +.|++.
T Consensus 259 HlDTV~~g------------G~~DG~---~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EEg~rF~~~~~GS~~~~G~~ 323 (591)
T PRK13590 259 HYDTVRNG------------GKYDGR---LGIFVPMACVRELHRQGRRLPFGLEVVGFAEEEGQRYKATFLGSGALIGDF 323 (591)
T ss_pred ccccCCCC------------CCcccH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCccccCCccccchHHHhCCC
Confidence 99999865 444444 6999999999999999988889999999999996 356664
Q ss_pred ---HHHc---------------CC-----------CCCCceEEEeeccCCCC---CcceeeecccccceeeEEEEEEEec
Q 022137 170 ---MIKE---------------GA-----------LGDSEAIFGMHIDVGIP---TGSIASISGPHLAATSVFNVKVEGR 217 (302)
Q Consensus 170 ---~~~~---------------~~-----------~~~~d~~~~~~~~~~~~---~~~~~~~~~~~~~G~~~~~i~v~G~ 217 (302)
+++. ++ .+++++.+.+|++++.- .+. ...+..+++|..+++|+++|+
T Consensus 324 ~~~~~~~~d~~g~~~~~al~~~g~~~~~~~~~~~~~~~~~a~~ElHiEqg~~Le~~~~-~~gvV~~~~G~~~~~v~v~Gk 402 (591)
T PRK13590 324 DPAWLDQKDADGITMREAMQHAGLCIDDIPKLRRDPARYLGFVEVHIEQGPVLNELDL-PLGIVTSINGSVRYVGEMIGM 402 (591)
T ss_pred hHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCC-ceEEEeeeeccEEEEEEEEeE
Confidence 2221 11 01345677888876521 121 112235578999999999999
Q ss_pred ccCCC-CCCC-CCCHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEEEec-CCcCcccCCeEEEEEEEecCChhhHHHHHH
Q 022137 218 GGHAA-MPHS-TIDPILTASSVILALQQLISREADPLQSLVLSVTYVRG-GTAFNIIPPFVEFGGTLRSLTTEGLYQLQK 294 (302)
Q Consensus 218 ~~Ha~-~p~~-g~Nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~g-g~~~n~iP~~~~~~~diR~~~~~~~~~v~~ 294 (302)
++|+| .|.. +.||+..+++++..+++.... ....+.+++.|++ |.+.|+||++|++.+|+|+.+.++.+.+.+
T Consensus 403 aaHag~~P~~~r~dAi~aaa~~i~~l~~~~~~----~~~~v~tVG~i~~~Gg~~NVIP~~a~~~iDiR~~~~e~~e~v~~ 478 (591)
T PRK13590 403 ASHAGTTPMDRRRDAAAAVAELALYVEQRAAQ----DGDSVGTVGMLEVPGGSINVVPGRCRFSLDIRAPTDAQRDAMVA 478 (591)
T ss_pred CCCCCCCCchhcccHHHHHHHHHHHHHHHHhc----CCCcEEEEEEEEECCCCCceECCEEEEEEEeeCCCHHHHHHHHH
Confidence 99999 4654 689999999999999886422 1235779999884 669999999999999999999999999887
Q ss_pred HHHHhhh
Q 022137 295 RLKEFDR 301 (302)
Q Consensus 295 ~i~~~~~ 301 (302)
.|++.++
T Consensus 479 ~i~~~i~ 485 (591)
T PRK13590 479 DVLAELE 485 (591)
T ss_pred HHHHHHH
Confidence 7776654
No 62
>PRK08554 peptidase; Reviewed
Probab=99.97 E-value=6.6e-29 Score=234.16 Aligned_cols=250 Identities=18% Similarity=0.208 Sum_probs=173.1
Q ss_pred HHHHHHHHHHhCCCCCcc------hHHHHHHHHHHHHhcCCCeeec--cCCceEEEEecCCCCcEEEEEEecccCCCCCC
Q 022137 39 WLVSVRRQIHENPELLFE------EHNTSALIRRELDKLGIPYAYP--VAKTGIVAQIGSGSRPVVVLRADMDALPLQEL 110 (302)
Q Consensus 39 ~~~~~~~~l~~ips~~~~------E~~~a~~l~~~l~~~g~~~~~~--~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~ 110 (302)
++++++++|++|||.++. +.++++|+.++|+++|++++.. ....|+++.++++ .|+|+|.||+||||.++.
T Consensus 2 ~~~~~l~~LV~i~S~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~l~~~~~~~-~~~l~l~gH~DtVp~~~~ 80 (438)
T PRK08554 2 DVLELLSSLVSFETVNDPSKGIKPSKECPKFIKDTLESWGIESELIEKDGYYAVYGEIGEG-KPKLLFMAHFDVVPVNPE 80 (438)
T ss_pred hHHHHHHHHhCCCCCCCcccCcchHHHHHHHHHHHHHHCCCeEEEEecCCceEEEEEeCCC-CCEEEEEeccccCCCCcc
Confidence 467889999999997643 5899999999999999998652 2457999998544 478999999999999752
Q ss_pred CCCc---ccc-ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCC--CCCCc
Q 022137 111 VEWE---HKS-KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGA--LGDSE 180 (302)
Q Consensus 111 ~~w~---~~~-~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~--~~~~d 180 (302)
.|. |.+ .+||++|||| |||+++++|+|+++|++. .++++|.|+|++||| ++.+..++++... ....|
T Consensus 81 -~w~~~Pf~~~~~~g~lyGrG~~DmKgg~aa~l~A~~~l~~~--~~~~~i~l~~~~dEE~g~~~~~~~~~~~~~~~~~~~ 157 (438)
T PRK08554 81 -EWNTEPFKLTVKGDKAYGRGSADDKGNVASVMLALKELSKE--PLNGKVIFAFTGDEEIGGAMAMHIAEKLREEGKLPK 157 (438)
T ss_pred -ccccCCceeEEECCEEEECCcccchHHHHHHHHHHHHHHhc--CCCCCEEEEEEcccccCccccHHHHHHHHhcCCCCC
Confidence 464 543 5689999999 799999999999999874 367899999999999 5544556554321 12467
Q ss_pred eEEEeeccCCCCCcceeeeccccc-ce----------------e---eEEEEEEEecc-cCCCCCCCCCC--HHHHHHHH
Q 022137 181 AIFGMHIDVGIPTGSIASISGPHL-AA----------------T---SVFNVKVEGRG-GHAAMPHSTID--PILTASSV 237 (302)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~-~G----------------~---~~~~i~v~G~~-~Ha~~p~~g~N--ai~~~~~~ 237 (302)
++|..++ ++.. +...+ +| . .++.+++.|.+ +|++.|..|.| |+..++++
T Consensus 158 ~~iv~Ep-----t~~~---~~~~~~kg~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Ha~~~~~g~~~~~i~~~~~~ 229 (438)
T PRK08554 158 YMINADG-----IGMK---PIIRRRKGFGVTIRVPSEKVKVKGKLREQTFEIRTPVVETRHAAYFLPGVDTHPLIAASHF 229 (438)
T ss_pred EEEEeCC-----CCCc---chhhcCCceEEEEEecccccccccceeeeeeceeecccCccccccccCCcCchHHHHHHHH
Confidence 7776643 2221 01111 12 2 34455555554 99998877665 58888777
Q ss_pred HHHHHHhhhhc----C-C--CCCCeeEEEEEEecCC-----------------------------------cCccc---C
Q 022137 238 ILALQQLISRE----A-D--PLQSLVLSVTYVRGGT-----------------------------------AFNII---P 272 (302)
Q Consensus 238 i~~l~~~~~~~----~-~--~~~~~~~~~~~i~gg~-----------------------------------~~n~i---P 272 (302)
+.++....... . . .....++++....+|. +.|++ |
T Consensus 230 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~g~n~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~n~~~i~~ 309 (438)
T PRK08554 230 LRESNVLAVSLEGKFLKGNVVPGEVTLTYLEPGEGEEVEVDLGLTRLLKAIVPLVRAPIKAEKYSDYGVSITPNVYSFAE 309 (438)
T ss_pred HhhcCceEEEEeeeeeecCcccceeEEEEecCCCCccccccccHHHHHHHHHHHHHHhhccccccccceeeccceEEecC
Confidence 76665321000 0 0 0111233332222333 56666 9
Q ss_pred CeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 273 PFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 273 ~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
++|++.+|+|+.| .+.+++.++|+++++
T Consensus 310 g~a~~~~DiR~~~-~~~e~v~~~i~~~~~ 337 (438)
T PRK08554 310 GKHVLKLDIRAMS-YSKEDIERTLKEVLE 337 (438)
T ss_pred CeEEEEEEEEecC-CCHHHHHHHHHHHhh
Confidence 9999999999987 688999999998764
No 63
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=99.96 E-value=4e-28 Score=215.28 Aligned_cols=271 Identities=20% Similarity=0.244 Sum_probs=207.6
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHhCCCCCcch------HHHHHHHHHHHHhcCCCeeec-------------cCCceEEE
Q 022137 26 TNQVMISAQQDKDWLVSVRRQIHENPELLFEE------HNTSALIRRELDKLGIPYAYP-------------VAKTGIVA 86 (302)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~l~~ips~~~~E------~~~a~~l~~~l~~~g~~~~~~-------------~~~~nvia 86 (302)
..++.++++.++++.++.|++.++|+|.+... .++++|+.++|+++|-+++.. +..+-+.+
T Consensus 4 l~~~fq~id~~~de~~~~L~e~v~iqsvs~dp~~r~~v~rm~~~~~~~l~~lG~~~~l~dlg~q~~~~g~~v~lPpvvl~ 83 (473)
T KOG2276|consen 4 LTKVFQSIDLNKDEFINTLREAVAIQSVSADPTKRLEVRRMADWLRDYLTKLGAPLELVDLGYQSLPDGQIVPLPPVVLG 83 (473)
T ss_pred HHHHHHHhhccHHHHHHHHHHHhcccccccCccccHHHHHHHHHHHHHHHHhCCceeeeecccCCCCCCcccccChhhhh
Confidence 56788999999999999999999999988643 889999999999999777651 12344667
Q ss_pred EecCCC-CcEEEEEEecccCCCCCCCCCccc----cccCCceecCCC---cHHHHHHHHHHHHHHhcCCCCCceEEEEEe
Q 022137 87 QIGSGS-RPVVVLRADMDALPLQELVEWEHK----SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQ 158 (302)
Q Consensus 87 ~~~~~~-~~~i~l~~H~DtVp~~~~~~w~~~----~~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~ 158 (302)
++++.+ +++++++||||++|+..+++|... .++||++||||+ ||++++.+.+++++++.+..++.+|.|+|.
T Consensus 84 ~~Gsdp~KktvlvYgHlDVqpA~~~DgW~TdPF~Lt~~~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~~lpvnv~f~~E 163 (473)
T KOG2276|consen 84 VLGSDPSKKTVLVYGHLDVQPANLEDGWNTDPFTLTEDDGKLFGRGATDDKGPVLSWIHAVKALQQLGIDLPVNVVFVFE 163 (473)
T ss_pred cccCCCCcceEEEEeeeeeeecCCCCCCcCCCeEEEEECCEEeccCcCCCCccchHHHHHHHHHHHhCccccceEEEEEE
Confidence 777664 589999999999999988999654 367999999995 899999999999999999999999999999
Q ss_pred ecCC-ccCcHHHHHHc---CCCCCCceEEEeeccCCCCCcceeeecc--cccceeeEEEEEEEe--cccCCCCCC-CCCC
Q 022137 159 PAEE-GGAGAFHMIKE---GALGDSEAIFGMHIDVGIPTGSIASISG--PHLAATSVFNVKVEG--RGGHAAMPH-STID 229 (302)
Q Consensus 159 ~~EE-g~~G~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~G~~~~~i~v~G--~~~Ha~~p~-~g~N 229 (302)
+.|| |+.|...++++ .+++++|++...+. ...|+ -+|+ .+.+|.+.+.|+|+| +..|||.-- --.-
T Consensus 164 gmEEsgS~~L~~l~~~~kD~~~~~vD~vciSdn---yWlg~--kkPcltyGlRG~~yf~i~v~g~~~DlHSGvfGG~~hE 238 (473)
T KOG2276|consen 164 GMEESGSEGLDELIEKEKDKFFKDVDFVCISDN---YWLGT--KKPCLTYGLRGVIYFQIEVEGPSKDLHSGVFGGVVHE 238 (473)
T ss_pred echhccCccHHHHHHHHhhhhhccCCEEEeeCc---eeccC--CCcccccccccceeEEEEEeecccccccccccchhHH
Confidence 9999 77888887764 34667898876532 22222 1222 344699999999999 788998431 1224
Q ss_pred HHHHHHHHHHHHHHhhhh----------------c------CC---------------CC-----------CCeeEEEEE
Q 022137 230 PILTASSVILALQQLISR----------------E------AD---------------PL-----------QSLVLSVTY 261 (302)
Q Consensus 230 ai~~~~~~i~~l~~~~~~----------------~------~~---------------~~-----------~~~~~~~~~ 261 (302)
|+..+..++..|.+...+ + .+ +. ..+++++..
T Consensus 239 ~m~dL~~~ms~Lv~~~~~Ilipgiy~~vaplteeE~~~y~~I~f~~~e~~~~tg~~~l~~~~k~~~l~~rWryPSLsihg 318 (473)
T KOG2276|consen 239 AMNDLVLVMSSLVDIQGRILIPGIYEDVAPLTEEEDSIYDDIDFDVEEFKEATGSQMLPTDDKKRILMHRWRYPSLSIHG 318 (473)
T ss_pred HHHHHHHHHHHhcCcCCcEeccchhhhccCCChHHHhhhhcceeeHhhhhccccccccccCchHHHhhhhcccCccceec
Confidence 555555555554331110 0 00 00 123677777
Q ss_pred Eec----CCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 262 VRG----GTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 262 i~g----g~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
|.| ..+..+||.++...+.+|+.|..+++.+.+.+.++++
T Consensus 319 IeGaFs~pG~kTVIP~kVigkfSiRlVP~md~e~verlv~~yl~ 362 (473)
T KOG2276|consen 319 IEGAFSGPGAKTVIPAKVVGKFSIRLVPNMDPEQVERLVTRYLE 362 (473)
T ss_pred ccceeeCCCceEEeehhheeeeEEEecCCCCHHHHHHHHHHHHH
Confidence 775 3588899999999999999999999999999988875
No 64
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=99.85 E-value=3.2e-20 Score=166.71 Aligned_cols=259 Identities=15% Similarity=0.127 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHHhCCCCCc--chHHHHHHHHHHHHhcCCCeee----------cc--CCceEEEEecCC-CCcEEEEEEe
Q 022137 37 KDWLVSVRRQIHENPELLF--EEHNTSALIRRELDKLGIPYAY----------PV--AKTGIVAQIGSG-SRPVVVLRAD 101 (302)
Q Consensus 37 ~~~~~~~~~~l~~ips~~~--~E~~~a~~l~~~l~~~g~~~~~----------~~--~~~nvia~~~~~-~~~~i~l~~H 101 (302)
.+++.++...|++.||.++ .|...+++|...|+++.+--++ ++ ++.||+|.++|+ .+++|++.||
T Consensus 7 ~e~v~~lt~~LV~~~SvtgT~GE~a~ad~l~~vL~~~pYFqehped~~~~pi~nDpygR~nv~AlVrg~~~k~tvvl~gH 86 (553)
T COG4187 7 SERVRALTLSLVSWPSVTGTPGEGAFADRLLGVLGELPYFQEHPEDLWLQPIHNDPYGRRNVFALVRGGTSKRTVVLHGH 86 (553)
T ss_pred HHHHHHHHHHHeeccccCCCcccccHHHHHHHHHhcCchhhhChHhhcccCCCCCccccceeEEEEecCCCCceEEEeec
Confidence 5788999999999999988 5789999999999998765443 23 789999999775 4689999999
Q ss_pred cccCCCCCCCCC---cccc----------------------ccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceE
Q 022137 102 MDALPLQELVEW---EHKS----------------------KIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTV 153 (302)
Q Consensus 102 ~DtVp~~~~~~w---~~~~----------------------~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i 153 (302)
+|||.+.+.... .|++ ..+++++||| ||+|+|+.|++++.+.+. ...+|||
T Consensus 87 ~DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav~la~L~~fa~~-~~~~GNl 165 (553)
T COG4187 87 FDTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALDMKSGLAVHLACLEEFAAR-TDRQGNL 165 (553)
T ss_pred cceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhhhhhHHHHHHHHHHhhC-CCCCCcE
Confidence 999987653222 2222 2478999999 699999999999999986 5788999
Q ss_pred EEEEeecCC-ccCcHHHHHHcC--C--CCCCceEEEeeccCCCC--CcceeeecccccceeeEEEEEEEecccCCCCCCC
Q 022137 154 RILFQPAEE-GGAGAFHMIKEG--A--LGDSEAIFGMHIDVGIP--TGSIASISGPHLAATSVFNVKVEGRGGHAAMPHS 226 (302)
Q Consensus 154 ~~~~~~~EE-g~~G~~~~~~~~--~--~~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~~p~~ 226 (302)
.|+.++||| .+.|+++.+... . -.++++-.+++.+...+ .|.-+..++++..|..-.-.-|.|+..|.|+|..
T Consensus 166 Lf~a~pdEE~~s~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~~~dGd~~ryvYtGtiGKLLp~f~vvG~etHvG~~f~ 245 (553)
T COG4187 166 LFMAVPDEEVESRGMREARPALPGLKKKFDLEYTAAINLDVTSDQGDGDQGRYVYTGTIGKLLPFFFVVGCETHVGYPFE 245 (553)
T ss_pred EEEeccchhhhcccHHHHHHHHHHHHHhhCceEEEEeccccccCCCCCccceEEEeccchhhcceeEEEeeccccCCccc
Confidence 999999999 567777654421 1 11345544554443323 2222233556677888888999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhh--hcCCCCCCeeEEEEEEec---CCcCcc-cCCeEEEEEEEecCChhhHHHHHHHHHHh
Q 022137 227 TIDPILTASSVILALQQLIS--READPLQSLVLSVTYVRG---GTAFNI-IPPFVEFGGTLRSLTTEGLYQLQKRLKEF 299 (302)
Q Consensus 227 g~Nai~~~~~~i~~l~~~~~--~~~~~~~~~~~~~~~i~g---g~~~n~-iP~~~~~~~diR~~~~~~~~~v~~~i~~~ 299 (302)
|+||..+++++++.++--.. .+.+ +..+...+.+.- -.+.|| -|.++++.+++=+- ..+.+++.+.+++.
T Consensus 246 Gvnan~maSei~~~le~N~~l~dr~~--Ge~t~PPs~L~qkDlKe~Y~VqTp~~a~~~fN~l~h-~~ta~~~~d~l~~~ 321 (553)
T COG4187 246 GVNANFMASEITRRLELNADLADRVD--GEITPPPSCLEQKDLKESYNVQTPERAWLYFNWLYH-SRTAKELFDRLKEE 321 (553)
T ss_pred CCCHHHHHHHHHHHhhcChhhhhhhC--CeeCCCcHhhhhhhhhhhccccCcchhhhhheehhh-cCCHHHHHHHHHHH
Confidence 99999999999999864211 1111 000111111111 123343 38888888887543 44555555555443
No 65
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.79 E-value=1.8e-18 Score=132.53 Aligned_cols=99 Identities=22% Similarity=0.292 Sum_probs=91.2
Q ss_pred ccceeeEEEEEEEecccCCCCCCCCCCHHHHHHHHHHHHHHhhhhcC-----CCCCCeeEEEEEEecCCcCcccCCeEEE
Q 022137 203 HLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREA-----DPLQSLVLSVTYVRGGTAFNIIPPFVEF 277 (302)
Q Consensus 203 ~~~G~~~~~i~v~G~~~Ha~~p~~g~Nai~~~~~~i~~l~~~~~~~~-----~~~~~~~~~~~~i~gg~~~n~iP~~~~~ 277 (302)
+++|..+++|+++|+++|++.|+.|+||+..+++++..|+++..+.. ......+++++.++||.+.|+||++|++
T Consensus 2 g~~G~~~~~i~~~G~~~H~s~~~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~~~n~ip~~a~~ 81 (111)
T PF07687_consen 2 GHRGVIWFRITITGKSGHSSRPEKGVNAIEAAARFLNALEELEFEWAFRPEEFFPGPPTLNIGSIEGGTAPNVIPDEATL 81 (111)
T ss_dssp EEEEEEEEEEEEESBSEETTSGGGSBCHHHHHHHHHHHHHHTTCHBTSTHHHCTCTSEEEEEEEEEEESSTTEESSEEEE
T ss_pred cCCCEEEEEEEEEeeccCCCCccCccCHHHHHHHHHHHHHHhhcccccccccccccccceeEeecccCCcCCEECCEEEE
Confidence 46799999999999999999999999999999999999998865432 4567799999999999999999999999
Q ss_pred EEEEecCChhhHHHHHHHHHHhhh
Q 022137 278 GGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 278 ~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
.+++|++|.++.+++.+.|+++++
T Consensus 82 ~~~~R~~p~~~~~~i~~~i~~~~~ 105 (111)
T PF07687_consen 82 TVDIRYPPGEDLEEIKAEIEAAVE 105 (111)
T ss_dssp EEEEEESTCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCcchHHHHHHHHHHHHH
Confidence 999999999999999999999876
No 66
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=99.73 E-value=1.2e-16 Score=143.89 Aligned_cols=132 Identities=14% Similarity=0.179 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeec-------------------cCCceEEEEecCCCCcEEEE
Q 022137 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYP-------------------VAKTGIVAQIGSGSRPVVVL 98 (302)
Q Consensus 38 ~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~-------------------~~~~nvia~~~~~~~~~i~l 98 (302)
+.+..+...+-..+..+..|.++++||.++|+++|++++.. ..+.||++.+++...+.|++
T Consensus 35 ~~~~~ia~~~~gR~~gS~~E~~aA~yL~~~f~~lG~~v~~q~f~~~~~~~~~~g~~~~~~~~g~nVIa~~~G~~~~~Ill 114 (346)
T PRK10199 35 TQARHIATFFPGRMTGSPAEMLSADYLRQQFQQMGYQSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIII 114 (346)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHCCCceEeeeccccceeecccccccccCCccceEEEEECCCCCCeEEE
Confidence 33444445566788888899999999999999999987531 12467999997765588999
Q ss_pred EEecccCCCCCCCCCccccccCCceecCC---CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcC
Q 022137 99 RADMDALPLQELVEWEHKSKIDGKMHACG---HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEG 174 (302)
Q Consensus 99 ~~H~DtVp~~~~~~w~~~~~~~g~l~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~ 174 (302)
.||+|||++.....|.++. +| ++++| +|+|++++|++++.|++. .++++|.|+++++|| |..|+++++++.
T Consensus 115 ~AH~DTV~p~~~~~~~~~~--~g-~~~~GA~DnasGvA~lLe~ar~l~~~--~~~~~I~fv~~~~EE~Gl~GS~~~~~~~ 189 (346)
T PRK10199 115 MAHLDTYAPQSDADVDANL--GG-LTLQGMDDNAAGLGVMLELAERLKNV--PTEYGIRFVATSGEEEGKLGAENLLKRM 189 (346)
T ss_pred EEEcCcCCCCCCCccccCC--CC-cccCCccccHHHHHHHHHHHHHHhhC--CCCCcEEEEEECCcccCcHHHHHHHHhc
Confidence 9999999754333444332 22 67777 479999999999999865 467899999999999 789999998863
No 67
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.56 E-value=2.3e-14 Score=132.25 Aligned_cols=251 Identities=16% Similarity=0.162 Sum_probs=182.4
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCee-e-------ccCC--ce-EEEEecCC-C-CcEEEEEEecc
Q 022137 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-Y-------PVAK--TG-IVAQIGSG-S-RPVVVLRADMD 103 (302)
Q Consensus 37 ~~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~-~-------~~~~--~n-via~~~~~-~-~~~i~l~~H~D 103 (302)
.+++++.+.++++||+.|++|.+++.++.+|++.+|+.+. . .... .| +.+.+++. + -|++-+.+|+|
T Consensus 4 ~~~l~~~F~~~~kI~~~S~~e~~~~p~~~~~~k~~~~~v~dE~~~i~~~~~a~~~~~~~~~~L~a~~d~V~~i~~~sh~D 83 (414)
T COG2195 4 MERLLDRFLELVKIPTQSKHEKAVAPSTVGQAKLLGLLVEDELGNIGLKKPATAGENYVPAVLQAHLDMVPEIGFISHHD 83 (414)
T ss_pred hHHHHHHHHHHeeCCCCCCCccccccccHHHHHHcCchhhhhhccccccccccCCCCeeeEEeecccccccccccccccc
Confidence 5778888999999999999999999999999999999982 2 1122 22 55556554 2 37899999999
Q ss_pred cCCCCC----CCCC---------------------ccccc-----------cCC-ceecCCCcHHHHHHHHHHHHHHhcC
Q 022137 104 ALPLQE----LVEW---------------------EHKSK-----------IDG-KMHACGHDVHTTMLLGAAKLIHQRK 146 (302)
Q Consensus 104 tVp~~~----~~~w---------------------~~~~~-----------~~g-~l~g~G~kg~~a~~l~a~~~l~~~~ 146 (302)
|+|-.. ...| .+.+. -|| .+-|-++|+|++.++.++..+++..
T Consensus 84 t~~d~~~~~v~~~~l~~~~Gad~i~~~~~~a~L~~~~~P~~~~~t~~~ei~~dGa~LLgaD~kAGia~i~~al~~~~~~~ 163 (414)
T COG2195 84 TVPDPIGPNVNPQILKATLGADNIGLAIGLAVLSPEHFPLEVLLTGDEEITTDGATLLGADDKAGIAEIMTALSVLREKH 163 (414)
T ss_pred ccccccccccCCceeeeccCcchhhhhhHHhhcCcccCCceeeeecceEEeccCccccCCcchhHHHHHHHHHHHHhhcC
Confidence 995210 0112 01110 122 2345566899999999999999653
Q ss_pred -CCCCceEEEEEeecCC-ccCcHHHHHHcCCCCCCceEEEeeccCCCCCcceeeecccccceeeEEEEEEEecccCCC-C
Q 022137 147 -DKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA-M 223 (302)
Q Consensus 147 -~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i~v~G~~~Ha~-~ 223 (302)
..+.++|++.|+++|| |+.|++.+.-..+ .+++.+.++ +.+.|.+... . .+...+++++.|+..|++ .
T Consensus 164 ~~i~h~~i~~g~s~~Ee~g~rg~~~~~~a~f--~a~~ay~iD---Gg~~g~i~~e-a---~~~~~~~~~~~g~~~h~~~a 234 (414)
T COG2195 164 PEIPHGGIRGGFSPDEEIGGRGAANKDVARF--LADFAYTLD---GGPVGEIPRE-A---FNAAAVRATIVGPNVHPGSA 234 (414)
T ss_pred ccccccCeEEEecchHHhhhhhhhhccHHhh--hcceeEecC---CCccCeeeee-c---cchheeeeeeeccCcCccch
Confidence 4578999999999999 5589887755421 245555543 3355655332 1 366789999999999999 5
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 224 PHSTIDPILTASSVILALQQLISREADPLQSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 224 p~~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
+...+||+..+.+++..+.....+ ..++.+.+..+.+...|.|.+++...+.+|.......+.....+++.++
T Consensus 235 ~~~~i~a~~~a~e~~~~~~~~~~~-----e~t~~~~Gv~~~~~~~~~V~~~s~~~~~iR~~d~~~~~s~~~~~~~~~~ 307 (414)
T COG2195 235 KGKMINALLLAAEFILELPLEEVP-----ELTEGPEGVYHLGDSTNSVEETSLNLAIIRDFDNLLFRARKDSMKDVVE 307 (414)
T ss_pred HHHHhhHHHhhhhhhhcCCccccc-----ccccccceEEeccccccchhhhhhhhhhhhhcchhHHHHhHHHHHHHHH
Confidence 767899999998888877653211 2467778888899999999999999999999988777777777766553
No 68
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=99.54 E-value=1.5e-13 Score=125.24 Aligned_cols=130 Identities=23% Similarity=0.290 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCC-CCcEEEEEEecccCCC-----CCC-
Q 022137 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG-SRPVVVLRADMDALPL-----QEL- 110 (302)
Q Consensus 38 ~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~-~~~~i~l~~H~DtVp~-----~~~- 110 (302)
+.+.+++++|+++|||++.|.++++++.++|+++|++++. +..+|+++.+.+. .+|+|+|.||||+|.. .+.
T Consensus 3 ~~~~~lLk~Lv~~~s~SG~E~~V~~~l~~~l~~~g~ev~~-D~~Gnlia~~~g~~~~~~v~l~aHmDevG~~V~~I~~~G 81 (343)
T TIGR03106 3 DYLTETLLALLAIPSPTGFTDAVVRYVAERLEDLGIEYEL-TRRGAIRATLPGREATPARAVVTHLDTLGAMVRELKDNG 81 (343)
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEE-CCCeEEEEEECCCCCCCeEEEEEeeccccceeeEECCCC
Confidence 4578899999999999999999999999999999998875 5899999988653 3589999999999943 110
Q ss_pred -------CCCc------------------------------------------cc-----------c-------------
Q 022137 111 -------VEWE------------------------------------------HK-----------S------------- 117 (302)
Q Consensus 111 -------~~w~------------------------------------------~~-----------~------------- 117 (302)
.+|. ++ +
T Consensus 82 ~l~~~~iGG~~~~~l~g~~v~i~t~~g~~~Gvi~~~~~~~H~~~~~~~~~~~~~~~~~l~iDiG~~s~ee~~~lGV~~Gd 161 (343)
T TIGR03106 82 RLELVPIGHWSARFAEGARVTIFTDSGEFRGTILPLKASGHAFNEEIDSQPTGWDHVEVRVDARASCRADLVRLGISVGD 161 (343)
T ss_pred eEEEEecCCCcccceeCCEEEEEeCCCeEEEEECCCCCCCccCChHHccCCCCCcccEEEEECCcCCHHHHHHcCCCCCC
Confidence 0110 00 0
Q ss_pred ----------ccCCceecCC--CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCCccCcHH
Q 022137 118 ----------KIDGKMHACG--HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAF 168 (302)
Q Consensus 118 ----------~~~g~l~g~G--~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~G~~ 168 (302)
..+|++|||+ ||+++++++++++.|++.+.+++.+|+++|+++||.+.|+.
T Consensus 162 ~v~~~~~~~~~~~~~i~gr~~D~K~G~a~~l~~~~~l~~~~~~~~~~v~~~~t~qEEvG~gaa 224 (343)
T TIGR03106 162 FVAFDPQPEFLANGFIVSRHLDDKAGVAALLAALKAIVEHKVPLPVDVHPLFTITEEVGSGAS 224 (343)
T ss_pred EEEECCccEEecCCEEEEEecccHHhHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCccch
Confidence 1246677776 68999999999999998776788999999999999445643
No 69
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.52 E-value=2.5e-14 Score=119.62 Aligned_cols=76 Identities=37% Similarity=0.636 Sum_probs=65.7
Q ss_pred EEEEecccCCCCCCCCCccc----cccCCceecCCC---cHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccC-cH
Q 022137 97 VLRADMDALPLQELVEWEHK----SKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGA-GA 167 (302)
Q Consensus 97 ~l~~H~DtVp~~~~~~w~~~----~~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~-G~ 167 (302)
+|+||||||| . .+.|.++ ..++|++||||+ |+++++++++++.|++.+.+++++|.++|+++|| ++. |+
T Consensus 1 ll~~H~Dtv~-~-~~~w~~~pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~ 78 (189)
T PF01546_consen 1 LLYAHMDTVP-G-PEGWKHDPFELSIEDGRLYGRGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGA 78 (189)
T ss_dssp EEEEES-BCS-T-GGGSSSSTTSEEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHH
T ss_pred CccccccccC-C-cCcCCCCCcccEEECCEEEcCCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchh
Confidence 6899999999 4 5688654 357999999994 8999999999999998888999999999999999 444 99
Q ss_pred HHHHHcC
Q 022137 168 FHMIKEG 174 (302)
Q Consensus 168 ~~~~~~~ 174 (302)
+++++++
T Consensus 79 ~~l~~~~ 85 (189)
T PF01546_consen 79 KHLLEEG 85 (189)
T ss_dssp HHHHHHC
T ss_pred hhhhhhc
Confidence 9999974
No 70
>PRK09961 exoaminopeptidase; Provisional
Probab=99.45 E-value=3.8e-12 Score=116.35 Aligned_cols=142 Identities=13% Similarity=0.234 Sum_probs=105.9
Q ss_pred HHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCCCCcEEEEEEecccCCC-----CCC-----
Q 022137 41 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPL-----QEL----- 110 (302)
Q Consensus 41 ~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~-----~~~----- 110 (302)
++++++|+++||||++|.++++++.++|+.+|++++. +..+|+++.++++.+|+|+|.||||+|+. .+.
T Consensus 3 ~~~L~~L~~~~s~sG~E~~v~~~i~~~l~~~~~~v~~-D~~Gnvi~~~~g~~~~~v~l~aHmDevg~~V~~I~~~G~l~~ 81 (344)
T PRK09961 3 LSLLKALSEADAIASSEQEVRQILLEEADRLQKEVRF-DGLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDV 81 (344)
T ss_pred HHHHHHHHhCCCCCCChHHHHHHHHHHHHhhCCEEEE-CCCCCEEEEEcCCCCCEEEEEeccceeceEEEEECCCceEEE
Confidence 3679999999999999999999999999999998775 58999999886544579999999999953 111
Q ss_pred ---CCCccc----------ccc-----------------------------------------------------CCcee
Q 022137 111 ---VEWEHK----------SKI-----------------------------------------------------DGKMH 124 (302)
Q Consensus 111 ---~~w~~~----------~~~-----------------------------------------------------~g~l~ 124 (302)
.+|..+ ..+ ++++.
T Consensus 82 ~~vGG~~~~~~~~~~v~i~~~~g~~i~Gvi~~~~~~~~~~~l~iDiG~~s~ee~~~~GI~~Gd~v~~~~~~~~~~~~~i~ 161 (344)
T PRK09961 82 LPVGNVRMAARQLQPVRITTREECKIPGLLNGDRQGNDVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVM 161 (344)
T ss_pred EeCCCccccccCCCEEEEEeCCCCEeeEEEChhhcCCCHHHEEEEcCCCCHHHHHhcCCCCCCEEEEcceeEEecCCEEE
Confidence 122100 000 11222
Q ss_pred cCC--CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCCCCCCceEEEeecc
Q 022137 125 ACG--HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHID 188 (302)
Q Consensus 125 g~G--~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~ 188 (302)
|+. .+.++++++++++.+++. +++.+|+++|++.|| |..|++..... + ++|.+++++..
T Consensus 162 gkalDnR~g~~~lle~l~~l~~~--~~~~~v~~~~tvqEEvG~rGa~~aa~~--i-~pd~~I~vDv~ 223 (344)
T PRK09961 162 GKAFDDRLGCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGLRGGQTATRA--V-SPDVAIVLDTA 223 (344)
T ss_pred EeechhhHhHHHHHHHHHHhhhc--CCCceEEEEEEcccccchHHHHHHHhc--c-CCCEEEEEecc
Confidence 332 358999999999999754 578999999999999 77888876443 2 46888877644
No 71
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=99.42 E-value=5.2e-12 Score=114.24 Aligned_cols=144 Identities=19% Similarity=0.274 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCCCC-cEEEEEEecccCCC-----CC--
Q 022137 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSR-PVVVLRADMDALPL-----QE-- 109 (302)
Q Consensus 38 ~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~-~~i~l~~H~DtVp~-----~~-- 109 (302)
+++.+++++|.++|+||+.|.++.+|+.++|++++.+++. +..+|+++..++.++ |.|++.||||++.. .+
T Consensus 2 ~~~~~~LkeL~~~~gpsG~E~eVr~~~~~el~~~~~ev~~-D~lGnlia~~~g~~g~~~imi~AHmDEiG~mV~~I~~~G 80 (355)
T COG1363 2 EELLELLKELLEAPGPSGYEEEVRDVLKEELEPLGDEVEV-DRLGNLIAKKGGKNGPPKVMIAAHMDEIGFMVKEIEDDG 80 (355)
T ss_pred hHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHhCCceEE-cCCCcEEEEecCCCCCccEEEEeecceeeeeEEEECCCc
Confidence 4678899999999999999999999999999999998875 589999999987434 56999999999932 00
Q ss_pred ------CCCCcccc----------cc------------------------------------------------------
Q 022137 110 ------LVEWEHKS----------KI------------------------------------------------------ 119 (302)
Q Consensus 110 ------~~~w~~~~----------~~------------------------------------------------------ 119 (302)
..+|.... .+
T Consensus 81 ~Lr~~~IGG~~~~~~~gq~v~i~t~~g~~i~GvIg~~p~H~~~~~~~~~~~~~~~el~iDiga~skeea~~lGI~vGd~v 160 (355)
T COG1363 81 FLRFVPIGGWDPQVLEGQRVTIHTDKGKKIRGVIGSKPPHLLKEEAERKKPPEWDELFIDIGASSKEEAEELGIRVGDFV 160 (355)
T ss_pred eEEEEEcCCcChhhccCcEEEEEeCCCcEEeeeEcccCccccCccccccCCCchhhEEEECCcCCHHHHHhcCCCCCCEE
Confidence 01231100 00
Q ss_pred ----------CCceecC--CCcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCCCCCCceEEEee
Q 022137 120 ----------DGKMHAC--GHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMH 186 (302)
Q Consensus 120 ----------~g~l~g~--G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~ 186 (302)
++++-++ +.+.+++++|++++.| + +..++.+++++|++.|| |.+|++....+ -++|..|.++
T Consensus 161 ~~~~~~~~l~~~~i~skalDdR~gva~lle~lk~l-~-~~~~~~~vy~v~tvqEEVGlrGA~~~a~~---i~pd~aiavd 235 (355)
T COG1363 161 VFDPRFRELANGRVVSKALDDRAGVAALLELLKEL-K-GIELPADVYFVASVQEEVGLRGAKTSAFR---IKPDIAIAVD 235 (355)
T ss_pred EEcCceEEecCCcEEeeeccchHhHHHHHHHHHHh-c-cCCCCceEEEEEecchhhccchhhccccc---cCCCEEEEEe
Confidence 0111121 2368999999999999 4 66899999999999999 77888765443 2467777765
Q ss_pred c
Q 022137 187 I 187 (302)
Q Consensus 187 ~ 187 (302)
.
T Consensus 236 ~ 236 (355)
T COG1363 236 V 236 (355)
T ss_pred c
Confidence 4
No 72
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=99.38 E-value=1.8e-11 Score=111.78 Aligned_cols=142 Identities=17% Similarity=0.186 Sum_probs=104.6
Q ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCC--CCcEEEEEEecccCCC-----CCC----
Q 022137 42 SVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG--SRPVVVLRADMDALPL-----QEL---- 110 (302)
Q Consensus 42 ~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~--~~~~i~l~~H~DtVp~-----~~~---- 110 (302)
+++++|.++|+||+.|.++++++.++|++++.+++. +..+|+++.++++ .+|+|+|.||||+|+. .+.
T Consensus 2 ~~L~~L~~~~gpSG~E~~v~~~i~~~l~~~~~~v~~-D~~GNvia~~~g~~~~~~~vml~AHmDeVGf~V~~I~~~G~l~ 80 (350)
T TIGR03107 2 NKIKEVTELQGTSGFEHPIRDYLRQDITPLVDQVET-DGLGGIFGIKESQVENAPRVMVAAHMDEVGFMVSQIKPDGTFR 80 (350)
T ss_pred hHHHHHHhCCCCCCCcHHHHHHHHHHHHhhCCEEEE-CCCCCEEEEecCCCCCCCEEEEEecccEeCEEEEEECCCceEE
Confidence 568999999999999999999999999999987664 5789999988653 3589999999999942 110
Q ss_pred ----CCCcc------------------------------cccc-------------------------------------
Q 022137 111 ----VEWEH------------------------------KSKI------------------------------------- 119 (302)
Q Consensus 111 ----~~w~~------------------------------~~~~------------------------------------- 119 (302)
.+|.. +..+
T Consensus 81 ~~~vGG~~~~~l~gq~V~i~t~~g~~i~GViG~~~~Hl~~~~~~~~~~~~~~~l~IDiGa~skee~~~~GI~vGd~v~~~ 160 (350)
T TIGR03107 81 VVELGGWNPLVVSSQRFTLFTRKGKKYPVISGSVPPHLLRGSSGGPQLPAVSDILFDGGFTNKDEAWSFGVRPGDVIVPQ 160 (350)
T ss_pred EEeCCCccccccCCcEEEEEeCCCCEEEEEEeCCcccccChhhcccccCChhhEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence 11210 0000
Q ss_pred --------CCceecCC--CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCCCCCCceEEEeecc
Q 022137 120 --------DGKMHACG--HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHID 188 (302)
Q Consensus 120 --------~g~l~g~G--~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~ 188 (302)
++++.|+. .+.|+++++++++.|++. +++.+|+++|++.|| |.+||+..... + ++|.+|+++..
T Consensus 161 ~~~~~~~~~~~i~~kalDdR~g~a~l~e~l~~l~~~--~~~~~l~~~~tvqEEvG~rGA~~aa~~--i-~pD~aI~vDv~ 235 (350)
T TIGR03107 161 TETILTANGKNVISKAWDNRYGVLMILELLESLKDQ--ELPNTLIAGANVQEEVGLRGAHVSTTK--F-NPDIFFAVDCS 235 (350)
T ss_pred CCeEEEcCCCEEEEeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEEChhhcCchhhhhHHhh--C-CCCEEEEEecC
Confidence 01122332 358999999999999864 577899999999999 77899865443 2 47888877654
Q ss_pred C
Q 022137 189 V 189 (302)
Q Consensus 189 ~ 189 (302)
+
T Consensus 236 ~ 236 (350)
T TIGR03107 236 P 236 (350)
T ss_pred C
Confidence 3
No 73
>PRK09864 putative peptidase; Provisional
Probab=99.34 E-value=4.7e-11 Score=108.91 Aligned_cols=139 Identities=15% Similarity=0.195 Sum_probs=102.4
Q ss_pred HHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCCCCcEEEEEEecccCCC-----CCC-----
Q 022137 41 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPL-----QEL----- 110 (302)
Q Consensus 41 ~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~-----~~~----- 110 (302)
++++++|.++|+||+.|.++++++.++|+.++.++.. +..+|+++..+ ..+|+|+|.||||+|+. .+.
T Consensus 3 ~~~L~~L~~~~g~SG~E~~v~~~l~~~l~~~~dev~~-D~~GNli~~~g-~~~~kvml~AHmDevG~mV~~I~~~G~l~~ 80 (356)
T PRK09864 3 IELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITF-DGLGSFVARKG-NKGPKVAVVGHMDEVGFMVTHIDESGFLRF 80 (356)
T ss_pred HHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCEEEE-CCCCCEEEEeC-CCCcEEEEEecccccCEEEEEECCCCeEEE
Confidence 4679999999999999999999999999999988754 57899999873 33479999999999942 110
Q ss_pred ---CCCccc---c----c--cC----------------------------------------------------------
Q 022137 111 ---VEWEHK---S----K--ID---------------------------------------------------------- 120 (302)
Q Consensus 111 ---~~w~~~---~----~--~~---------------------------------------------------------- 120 (302)
.+|..+ . . .+
T Consensus 81 ~~lGG~~~~~l~~q~V~i~t~~g~~v~GVig~~~~H~~~~~~~~k~~~~~~l~IDiGa~s~ee~~~~GV~vGD~v~~~~~ 160 (356)
T PRK09864 81 TTIGGWWNQSMLNHRVTIRTHKGVKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREEVEKRGVEIGDFISPEAN 160 (356)
T ss_pred EeCCCcCccccCCCEEEEEeCCCCEEEEEEeCCccccCChhHcccCCChhHEEEEeCCCCHHHHHhcCCCCCCEEEECCC
Confidence 123100 0 0 01
Q ss_pred ------CceecCC--CcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCCCCCCceEEEeecc
Q 022137 121 ------GKMHACG--HDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHID 188 (302)
Q Consensus 121 ------g~l~g~G--~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~ 188 (302)
+++.|+. .+.|+++++.+++.|++ ++.+++++|++.|| |.+||+..... + ++|.+|+++..
T Consensus 161 ~~~l~~~~i~~kalDnR~g~~~lle~l~~l~~----~~~~vy~v~TvQEEvGlrGA~~aa~~--i-~PDiaIavDvt 230 (356)
T PRK09864 161 FACWGEDKVVGKALDNRIGCAMMAELLQTVNN----PEITLYGVGSVEEEVGLRGAQTSAEH--I-KPDVVIVLDTA 230 (356)
T ss_pred cEEEcCCEEEEEeCccHHHHHHHHHHHHHhhc----CCCeEEEEEEcchhcchHHHHHHHhc--C-CCCEEEEEecc
Confidence 1111222 35899999999999964 77899999999999 77898876443 2 47888877643
No 74
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.71 E-value=1.3e-07 Score=93.04 Aligned_cols=134 Identities=20% Similarity=0.289 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHhC-CCCCc---chHHHHHHHHHHHHhcCCCe-------ee-----------------ccCCceEEEEec
Q 022137 38 DWLVSVRRQIHEN-PELLF---EEHNTSALIRRELDKLGIPY-------AY-----------------PVAKTGIVAQIG 89 (302)
Q Consensus 38 ~~~~~~~~~l~~i-ps~~~---~E~~~a~~l~~~l~~~g~~~-------~~-----------------~~~~~nvia~~~ 89 (302)
+++++.+.++.++ |.|.+ +|..+.+++.+++.+..-.. +. -.+..|++..+.
T Consensus 57 ~rA~~~l~~ls~~G~~~~gS~~ne~~a~~~il~e~~~i~~~~~~~~~~~Evd~q~~sg~~~~~~~~~~Y~~i~NIvVki~ 136 (834)
T KOG2194|consen 57 ARALKDLLSLSAAGPHPVGSDNNEMHASSFILKEVNKIRKGSQSDLYDMEVDLQSASGSFILEGMTLVYQNISNIVVKIS 136 (834)
T ss_pred HHHHHHHHHHHhcCCcccCchhhHHHHHHHHHHHHHHHHhhhhcchhhheeceeeccceeeehhhhheeeeeeeEEEecC
Confidence 4444555555554 44444 45688999998887652111 11 124678888885
Q ss_pred CC--CCc-EEEEEEecccCCCCCCCCCccccccCCceecCCCc-HHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-cc
Q 022137 90 SG--SRP-VVVLRADMDALPLQELVEWEHKSKIDGKMHACGHD-VHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GG 164 (302)
Q Consensus 90 ~~--~~~-~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~g~G~k-g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~ 164 (302)
++ +.+ .|++++|+|+||.+ +|.|++ .++|++|++++.+.+....+.++|.|+|..+|| +.
T Consensus 137 ~k~~~~~~~lLlnaHfDSvpt~---------------~gAtDDg~~va~mLe~lRv~s~~~~~l~~~vVFLfNgaEE~~L 201 (834)
T KOG2194|consen 137 PKNGNDKNALLLNAHFDSVPTG---------------PGATDDGSGVASMLEALRVLSKSDKLLTHSVVFLFNGAEESGL 201 (834)
T ss_pred CCCCCccceeeeeccccccCCC---------------CCCCcchhHHHHHHHHHHHhhcCCCcccccEEEEecCcccchh
Confidence 54 224 79999999999976 344444 488999999999998877789999999999999 67
Q ss_pred CcHHHHHHcCCC-CCCceEEEee
Q 022137 165 AGAFHMIKEGAL-GDSEAIFGMH 186 (302)
Q Consensus 165 ~G~~~~~~~~~~-~~~d~~~~~~ 186 (302)
.|+..++.++.+ +.+.+++.++
T Consensus 202 ~gsH~FItQH~w~~~~ka~INLe 224 (834)
T KOG2194|consen 202 LGSHAFITQHPWSKNIKAVINLE 224 (834)
T ss_pred hhcccceecChhhhhhheEEecc
Confidence 888888876543 3466666553
No 75
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=98.40 E-value=8.8e-07 Score=73.48 Aligned_cols=80 Identities=24% Similarity=0.408 Sum_probs=57.1
Q ss_pred EEEEEEecccCCCCCCCCCccccccCCceecCC--Cc-HHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHH
Q 022137 95 VVVLRADMDALPLQELVEWEHKSKIDGKMHACG--HD-VHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHM 170 (302)
Q Consensus 95 ~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~g~G--~k-g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~ 170 (302)
.|++.||+|+++ ... + + -++.| ++ +|++++|++++.|++.+..++++|+|+|..+|| |..|++++
T Consensus 2 ~ivi~aH~Ds~~-~~~---~------~-~~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~ 70 (179)
T PF04389_consen 2 YIVIGAHYDSVG-GDA---D------G-SWSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAF 70 (179)
T ss_dssp EEEEEEE--BES-CCC----------T-CSSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHH
T ss_pred EEEEEeecCCCC-CcC---C------C-cccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHH
Confidence 689999999998 221 1 1 23344 33 699999999999999777788999999999999 78999999
Q ss_pred HHcC--CCCCCceEEEe
Q 022137 171 IKEG--ALGDSEAIFGM 185 (302)
Q Consensus 171 ~~~~--~~~~~d~~~~~ 185 (302)
+++. ...++.+++.+
T Consensus 71 ~~~~~~~~~~~~~~inl 87 (179)
T PF04389_consen 71 VEHDHEELDNIAAVINL 87 (179)
T ss_dssp HHHHHCHHHHEEEEEEE
T ss_pred HHhhhcccccceeEEec
Confidence 9632 12234455554
No 76
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=97.98 E-value=4.1e-05 Score=68.57 Aligned_cols=60 Identities=17% Similarity=0.237 Sum_probs=44.9
Q ss_pred eecCCC--cHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCCCCCCceEEEeec
Q 022137 123 MHACGH--DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGALGDSEAIFGMHI 187 (302)
Q Consensus 123 l~g~G~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~ 187 (302)
+.|+.. ..++++++++++.|++. .++.+|+++|++.|| |..|+.....+ + ++|..++++.
T Consensus 128 i~gkalDdR~g~~~lle~l~~l~~~--~~~~~v~~v~tvqEEvG~rGA~~aa~~--i-~PD~ai~vD~ 190 (292)
T PF05343_consen 128 IVGKALDDRAGCAVLLELLRELKEK--ELDVDVYFVFTVQEEVGLRGAKTAAFR--I-KPDIAIAVDV 190 (292)
T ss_dssp EEETTHHHHHHHHHHHHHHHHHTTS--S-SSEEEEEEESSCTTTSHHHHHHHHH--H--CSEEEEEEE
T ss_pred EEEEeCCchhHHHHHHHHHHHHhhc--CCCceEEEEEEeeeeecCcceeecccc--c-CCCEEEEEee
Confidence 445553 47999999999999875 456999999999999 77898876554 1 3677776654
No 77
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=97.33 E-value=0.0036 Score=54.55 Aligned_cols=126 Identities=17% Similarity=0.166 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHhCCCCCc--chHHHHHHHHHHHHhcCCCeeec----------cCCceEEEEecCCCCcEEEEEEeccc
Q 022137 37 KDWLVSVRRQIHENPELLF--EEHNTSALIRRELDKLGIPYAYP----------VAKTGIVAQIGSGSRPVVVLRADMDA 104 (302)
Q Consensus 37 ~~~~~~~~~~l~~ips~~~--~E~~~a~~l~~~l~~~g~~~~~~----------~~~~nvia~~~~~~~~~i~l~~H~Dt 104 (302)
..++++.++-+ -+|...| +-.++.+||.+.|+.+|+.++.+ ..-.|+++++.......+++.+|||+
T Consensus 50 ~~~~~~~L~p~-lv~Rvpgs~g~~~vr~~i~~~l~~l~w~ve~~~f~~~tp~g~~~f~nii~tl~~~A~r~lVlachyds 128 (338)
T KOG3946|consen 50 WNRLWENLLPI-LVPRVPGSPGSRQVRRFIIQHLRNLGWAVETDAFTDNTPLGTRNFNNLIATLDPNASRYLVLACHYDS 128 (338)
T ss_pred HHHHHHhhhhh-hccccCCCCccHHHHHHHHHHHHhcCceeeeccccccCcceeeeeeeEEEecCCCcchheeeeccccc
Confidence 34555554433 2344333 44789999999999999998762 12567889887664578999999998
Q ss_pred CCCCCCCCCccccccCCceecCCCcHHHHHHHHHHHHHHhc----CCCCCceEEEEEeecCCc---------cCcHHHHH
Q 022137 105 LPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQR----KDKLKGTVRILFQPAEEG---------GAGAFHMI 171 (302)
Q Consensus 105 Vp~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~----~~~~~~~i~~~~~~~EEg---------~~G~~~~~ 171 (302)
=-.. +|.| +-+.|.-..+|+++..+++|.+. ....+-.+.++|..+||. ..|++++.
T Consensus 129 k~~p---~~~~-------vgatdsAvpcamll~laq~l~~~~~~~~~~s~lsL~LvFFDGEEAf~eW~p~DSlYGsRhLA 198 (338)
T KOG3946|consen 129 KIFP---GGMF-------VGATDSAVPCAMLLNLAQALDKILCSKVSASQLSLQLVFFDGEEAFEEWGPEDSLYGSRHLA 198 (338)
T ss_pred ccCC---Ccce-------EeeccccccHHHHHHHHHHHHHHHhcccCcCceeEEEEEeccHHHHhhcCCccccchHHHHH
Confidence 7432 1222 22334446899999999998643 223567899999999992 26999987
Q ss_pred Hc
Q 022137 172 KE 173 (302)
Q Consensus 172 ~~ 173 (302)
++
T Consensus 199 ~~ 200 (338)
T KOG3946|consen 199 AK 200 (338)
T ss_pred HH
Confidence 65
No 78
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=97.32 E-value=0.0036 Score=57.54 Aligned_cols=114 Identities=14% Similarity=0.168 Sum_probs=76.7
Q ss_pred HHHHHHHHhcCCCeee---------ccCCceEEEEecCC--------CCcEEEEEEecccCCCCCCCCCccccccCCcee
Q 022137 62 ALIRRELDKLGIPYAY---------PVAKTGIVAQIGSG--------SRPVVVLRADMDALPLQELVEWEHKSKIDGKMH 124 (302)
Q Consensus 62 ~~l~~~l~~~g~~~~~---------~~~~~nvia~~~~~--------~~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~ 124 (302)
+.+..-....|++... +....|+.+++..+ .-|+|++.+|+||..+.+ +.=-
T Consensus 165 ~~ll~Tasangy~iv~sg~sp~a~~s~ki~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap-----------~lsv 233 (555)
T KOG2526|consen 165 QHLLQTASANGYSIVSSGQSPEAPPSYKILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAP-----------GLSV 233 (555)
T ss_pred HHHHhhhccCcEEEEecCCCcccCCCCccceEEeecccccccccccccCCeEEEEEeccccccCC-----------CCCC
Confidence 4455555566776544 23467888888521 239999999999998654 1112
Q ss_pred cCCCc-HHHHHHHHHHHHHHhcC----CCCCceEEEEEeecCC-ccCcHHHHHHcC---CCCCCceEEEee
Q 022137 125 ACGHD-VHTTMLLGAAKLIHQRK----DKLKGTVRILFQPAEE-GGAGAFHMIKEG---ALGDSEAIFGMH 186 (302)
Q Consensus 125 g~G~k-g~~a~~l~a~~~l~~~~----~~~~~~i~~~~~~~EE-g~~G~~~~~~~~---~~~~~d~~~~~~ 186 (302)
|.+.+ +|+.++|+.++.+.+.- ...+.++.|+.+++.- -..|.+.+++-. .-+++|+++|++
T Consensus 234 gADSNGSGvvaLLelarlfSkly~ypsTrakYnLlF~lt~aG~lNyqGTkkWLe~dd~~lq~nVdfaiCLd 304 (555)
T KOG2526|consen 234 GADSNGSGVVALLELARLFSKLYDYPSTRAKYNLLFILTAAGKLNYQGTKKWLEFDDADLQKNVDFAICLD 304 (555)
T ss_pred CCCCCCccHHHHHHHHHHHHHHhcCcccccceeEEEEEccCccccccchhhhhhcchHHHHhcccEEEEhh
Confidence 23332 48999999999987642 2358999999998876 347888887732 223688888874
No 79
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=97.15 E-value=0.0018 Score=61.40 Aligned_cols=44 Identities=30% Similarity=0.275 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCcHHHHHHcCC
Q 022137 130 VHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAGAFHMIKEGA 175 (302)
Q Consensus 130 g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~ 175 (302)
+|++++|++++.|+.. .++.+|.|++...|| |..|+++++.+..
T Consensus 231 sGva~llEiAr~l~~~--~p~~~v~f~~~~aEE~Gl~GS~~~~~~~~ 275 (435)
T COG2234 231 SGVAALLELARVLKGN--PPKRTVRFVAFGAEESGLLGSEAYVKRLS 275 (435)
T ss_pred HHHHHHHHHHHHHhcC--CCCceEEEEEecchhhcccccHHHHhcCC
Confidence 6999999999999976 489999999999999 8899999988755
No 80
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=96.73 E-value=0.0053 Score=60.98 Aligned_cols=79 Identities=22% Similarity=0.233 Sum_probs=60.4
Q ss_pred CCceEEEEecCC--CCcEEEEEEecccCCCCCCCCCccccccCCceecCCCcHHHHHHHHHHHHHH---hcCCCCCceEE
Q 022137 80 AKTGIVAQIGSG--SRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIH---QRKDKLKGTVR 154 (302)
Q Consensus 80 ~~~nvia~~~~~--~~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~---~~~~~~~~~i~ 154 (302)
.-.|+++.+.|. +..-|++.+|.|..-.+- . +..+|.+.++..++++. +.+.+|.++|+
T Consensus 337 ki~NIig~I~Gs~epD~~ViigahrDSw~~Ga--------~--------dp~sGta~Ll~i~~~~~~~~k~gwrP~RtI~ 400 (702)
T KOG2195|consen 337 KIQNIIGKIEGSEEPDRYVIIGAHRDSWTFGA--------I--------DPNSGTALLLEIARALSKLKKRGWRPRRTIL 400 (702)
T ss_pred eeeeEEEEEecCcCCCeEEEEeccccccccCC--------c--------CCCccHHHHHHHHHHHHHHHHcCCCccceEE
Confidence 467899999773 568899999999765331 1 11246777877777654 56889999999
Q ss_pred EEEeecCC-ccCcHHHHHHcC
Q 022137 155 ILFQPAEE-GGAGAFHMIKEG 174 (302)
Q Consensus 155 ~~~~~~EE-g~~G~~~~~~~~ 174 (302)
|+...+|| |..|+-++++..
T Consensus 401 F~sWdAeEfGliGStE~~E~~ 421 (702)
T KOG2195|consen 401 FASWDAEEFGLLGSTEWAEEY 421 (702)
T ss_pred EEEccchhccccccHHHHHHH
Confidence 99999999 788998888754
No 81
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=95.59 E-value=0.052 Score=47.01 Aligned_cols=68 Identities=19% Similarity=0.256 Sum_probs=51.0
Q ss_pred cEEEEEEecccCCCCCCCCCccccccCCceecCCC-cHHHHHHHHHHHHHHhc---CCCCCceEEEEEeecCC-ccCcHH
Q 022137 94 PVVVLRADMDALPLQELVEWEHKSKIDGKMHACGH-DVHTTMLLGAAKLIHQR---KDKLKGTVRILFQPAEE-GGAGAF 168 (302)
Q Consensus 94 ~~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~g~G~-kg~~a~~l~a~~~l~~~---~~~~~~~i~~~~~~~EE-g~~G~~ 168 (302)
|.|++.+.||+.-.-. +.-.|-+. -.|++++|+++++|.+. ...++++|.|+|..+|. +..|++
T Consensus 1 ~iIlv~armDs~s~F~-----------~~s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiGS~ 69 (234)
T PF05450_consen 1 PIILVVARMDSFSFFH-----------DLSPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIGSS 69 (234)
T ss_pred CEEEEEecccchhccc-----------CCCCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccchH
Confidence 6799999999986432 22223222 27999999999999865 23578999999999999 667888
Q ss_pred HHHH
Q 022137 169 HMIK 172 (302)
Q Consensus 169 ~~~~ 172 (302)
.++.
T Consensus 70 R~vy 73 (234)
T PF05450_consen 70 RFVY 73 (234)
T ss_pred HHHH
Confidence 7754
No 82
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein and play a key role in protein degradation and in the metabolism of biologically active peptides. They do not contain HEXXH motif (which is used as one of the signature patterns to group the peptidase families) in the metal-binding site. The two associated zinc ions and the active site are entirely enclosed within the C-terminal catalytic domain in leucine aminopeptidase. The enzyme is a hexamer, with the catalytic domains clustered around the three-fold axis, and the two trimers related to one another by a two-fold rotation. The N-terminal domain is structurally similar to the ADP-ribose binding Macro domain. This family includes proteins from bacteria, archaea, animals and plants.
Probab=94.92 E-value=0.89 Score=43.56 Aligned_cols=120 Identities=17% Similarity=0.081 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeec-------cCCceEEEEecCC-CCcEEEEEEecccCCCC
Q 022137 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYP-------VAKTGIVAQIGSG-SRPVVVLRADMDALPLQ 108 (302)
Q Consensus 37 ~~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~-------~~~~nvia~~~~~-~~~~i~l~~H~DtVp~~ 108 (302)
..+-+.+.|+|++.|+---.-...++++.+.+++.|+++++. .+.+.+++.=++. ..|.++..-+...-+
T Consensus 153 ~a~~~~~aRdL~n~P~n~~tP~~~a~~a~~l~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~p~lv~l~Y~g~~~-- 230 (468)
T cd00433 153 IAEGVNLARDLVNTPANDLTPTYLAEEAKELAKELGVKVEVLDEKELEELGMGALLAVGKGSEEPPRLIVLEYKGKGA-- 230 (468)
T ss_pred HHHHHHHHHHhhcCCcccCCHHHHHHHHHHHHHhcCCEEEEEcHHHHHhCCCCceeeecccCCCCCEEEEEEECCCCC--
Confidence 456678899999998866666889999999999999998872 3455566665444 346666665543221
Q ss_pred CCCCCccccccCCcee---------cCC---C---cHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC
Q 022137 109 ELVEWEHKSKIDGKMH---------ACG---H---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (302)
Q Consensus 109 ~~~~w~~~~~~~g~l~---------g~G---~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 162 (302)
...+..-.-.|.-| +.+ | ++|.|+.+++++++.+. +++.+|..+....|=
T Consensus 231 --~~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlga~~aia~l--~~~vnV~~i~~~~EN 295 (468)
T cd00433 231 --SKKPIALVGKGITFDTGGLSLKPAAGMDGMKYDMGGAAAVLGAMKAIAEL--KLPVNVVGVLPLAEN 295 (468)
T ss_pred --CCCcEEEEcCceEecCCCccccCccChhhccccchhHHHHHHHHHHHHHc--CCCceEEEEEEeeec
Confidence 11222112223322 122 3 48999999999999987 468889888887776
No 83
>PRK00913 multifunctional aminopeptidase A; Provisional
Probab=94.77 E-value=1.4 Score=42.24 Aligned_cols=120 Identities=13% Similarity=0.124 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeee-------ccCCceEEEEecCC-CCcEEEEEEecccC---
Q 022137 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAY-------PVAKTGIVAQIGSG-SRPVVVLRADMDAL--- 105 (302)
Q Consensus 37 ~~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~-------~~~~~nvia~~~~~-~~~~i~l~~H~DtV--- 105 (302)
..+.+.+.|+|++.|+---.-...++++.+.+++.|+++++ ..+.+.+++.=++. ..|.++..-+.-.-
T Consensus 170 ~a~~~~~aRdL~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~prli~l~Y~g~~~~i 249 (483)
T PRK00913 170 IAEGVNLARDLVNEPPNILTPAYLAERAKELAKEYGLEVEVLDEKEMEKLGMGALLAVGQGSANPPRLIVLEYKGGKKPI 249 (483)
T ss_pred HHHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHhcCCEEEEEeHHHHHhCCCCcEEEEeccCCCCCeEEEEEECCCCCeE
Confidence 35667899999999986666688999999999999999876 23455566665444 34555555543110
Q ss_pred -CCCCCCCCccccccCCc-ee-cCC---C---cHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC
Q 022137 106 -PLQELVEWEHKSKIDGK-MH-ACG---H---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (302)
Q Consensus 106 -p~~~~~~w~~~~~~~g~-l~-g~G---~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 162 (302)
-++ .+.+|+ .+|. |. +.+ | .+|.|+.+++++++.+. +++.+|..+....|=
T Consensus 250 ~LVG--KGITFD--sGG~slKp~~~M~~MK~DM~GAAaVlga~~aia~l--kl~vnV~~v~~l~EN 309 (483)
T PRK00913 250 ALVG--KGLTFD--SGGISLKPAAGMDEMKYDMGGAAAVLGTMRALAEL--KLPVNVVGVVAACEN 309 (483)
T ss_pred EEEc--CceEec--CCCccCCCCcChhhcccccHhHHHHHHHHHHHHHc--CCCceEEEEEEeecc
Confidence 011 122232 1221 11 111 3 48999999999999977 567899988888876
No 84
>PTZ00412 leucyl aminopeptidase; Provisional
Probab=94.42 E-value=1.1 Score=43.42 Aligned_cols=119 Identities=16% Similarity=0.062 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCee-e-------ccCCceEEEEecCCC-CcEEEEEEecccCCCC
Q 022137 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYA-Y-------PVAKTGIVAQIGSGS-RPVVVLRADMDALPLQ 108 (302)
Q Consensus 38 ~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~-~-------~~~~~nvia~~~~~~-~~~i~l~~H~DtVp~~ 108 (302)
.+.+.+.|+|++-|+---.-...+++..+.+.+.|++++ + ..+.+.++++=++.. .|.++..-|. +..
T Consensus 212 a~~vn~ARdLvn~P~N~ltP~~~Ae~a~~~~~~~g~~v~~Vl~~~~l~~~gmg~llaVgkGS~~pPrli~L~Y~---g~~ 288 (569)
T PTZ00412 212 GHCVNEARNLGNLREDEGVPQFYAEWIKKELAPLGIKVRKVLRGEQLEGAGLNLMYNVGKGSRHEPYLVVFEYI---GNP 288 (569)
T ss_pred HHHHHHHHHhccCChhhcCHHHHHHHHHHHHhhcCCEEEEEEcHHHHHHCCCcceeeeeccCCCCCEEEEEEeC---CCC
Confidence 556788999999988655667889999988888999985 4 224555667655543 3555555442 221
Q ss_pred CCCCCccccccCCceecC---------C---C---cHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC
Q 022137 109 ELVEWEHKSKIDGKMHAC---------G---H---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (302)
Q Consensus 109 ~~~~w~~~~~~~g~l~g~---------G---~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 162 (302)
. ...+..-...|.-|-. + | .+|.|+.+++++++.+. +++.+|..++...|=
T Consensus 289 ~-~~~~iaLVGKGITFDSGGisLKP~~~M~~MK~DMgGAAaVlga~~AiA~L--klpvnVv~iiplaEN 354 (569)
T PTZ00412 289 R-SSAATALVGKGVTFDCGGLNIKPYGSMETMHSDMMGAATVMCTLKAIAKL--QLPVNVVAAVGLAEN 354 (569)
T ss_pred C-CCCcEEEEcCceEEcCCCCCCCCccChhhhhccchhHHHHHHHHHHHHHc--CCCeEEEEEEEhhhc
Confidence 1 1223222222333321 2 3 48999999999999876 567888888887766
No 85
>PRK05015 aminopeptidase B; Provisional
Probab=94.07 E-value=1.9 Score=40.45 Aligned_cols=120 Identities=18% Similarity=0.153 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhc---CCCeee-------ccCCceEEEEecCCCCcEEEEEEecccCCC
Q 022137 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKL---GIPYAY-------PVAKTGIVAQIGSGSRPVVVLRADMDALPL 107 (302)
Q Consensus 38 ~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~---g~~~~~-------~~~~~nvia~~~~~~~~~i~l~~H~DtVp~ 107 (302)
-+..++.|+|++.|+-.-.....++...+.++++ ++++++ ..+.+.++++=++...|+.++.-+|. |.
T Consensus 100 ~~~~~~aRdLvn~P~n~ltP~~lA~~a~~~~~~~~~~~v~v~Vl~~~~L~~~gmggilaVgrGS~~pP~lv~L~Y~--~~ 177 (424)
T PRK05015 100 LKIIDWVRDTINAPAEELGPEQLAQRAADLICSVAGDAVSYRIIKGEDLREQGYMGIHTVGRGSERPPVLLALDYN--PT 177 (424)
T ss_pred HHHHHHHHHHhcCCcccCCHHHHHHHHHHHHHhhccCceEEEEeeHHHHHHCCCCceeeeeccCCCCCEEEEEEec--CC
Confidence 3457888999999886555677888888888776 466655 23455566665544334444433432 33
Q ss_pred CCCCCCcc--ccccCCceec---------CC---C---cHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC
Q 022137 108 QELVEWEH--KSKIDGKMHA---------CG---H---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (302)
Q Consensus 108 ~~~~~w~~--~~~~~g~l~g---------~G---~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 162 (302)
++. ..|. .....|+-|- .+ | .+|.|+.++++.++.+. .++.+|..++...|=
T Consensus 178 g~~-~~~v~~aLVGKGITFDSGG~sLKps~~M~~MK~DMgGAAaV~ga~~~a~~~--~l~~nV~~il~~aEN 246 (424)
T PRK05015 178 GDP-DAPVYACLVGKGITFDSGGYSIKPSAGMDSMKSDMGGAATVTGALALAITR--GLNKRVKLFLCCAEN 246 (424)
T ss_pred CCC-CCCeeEEEecCceEecCCCccCCCCcCHHHhhcchhHHHHHHHHHHHHHhc--CCCceEEEEEEeccc
Confidence 321 2222 1112233221 12 3 48999999999888766 577899999888876
No 86
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M17 (leucyl aminopeptidase family, clan MF), the type example being leucyl aminopeptidase from Bos taurus (Bovine). Aminopeptidases are exopeptidases involved in the processing and regular turnover of intracellular proteins, although their precise role in cellular metabolism is unclear [, ]. Leucine aminopeptidases cleave leucine residues from the N-terminal of polypeptide chains, but substantial rates are evident for all amino acids []. The enzymes exist as homo-hexamers, comprising 2 trimers stacked on top of one another []. Each monomer binds 2 zinc ions and folds into 2 alpha/beta-type quasi-spherical globular domains, producing a comma-like shape []. The N-terminal 150 residues form a 5-stranded beta-sheet with 4 parallel and 1 anti-parallel strand sandwiched between 4 alpha-helices []. An alpha-helix extends into the C-terminal domain, which comprises a central 8-stranded saddle-shaped beta-sheet sandwiched between groups of helices, forming the monomer hydrophobic core []. A 3-stranded beta-sheet resides on the surface of the monomer, where it interacts with other members of the hexamer []. The 2 zinc ions and the active site are entirely located in the C-terminal catalytic domain [].; GO: 0004177 aminopeptidase activity, 0006508 proteolysis, 0005622 intracellular; PDB: 3KZW_L 3KQX_C 3KQZ_L 3KR4_I 3KR5_J 3T8W_C 3H8F_D 3H8G_A 3H8E_B 3IJ3_A ....
Probab=93.51 E-value=0.24 Score=44.57 Aligned_cols=110 Identities=18% Similarity=0.202 Sum_probs=68.7
Q ss_pred HHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeecc-------CC-------------ce-EEEEecCC---CCcEE
Q 022137 41 VSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV-------AK-------------TG-IVAQIGSG---SRPVV 96 (302)
Q Consensus 41 ~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~~-------~~-------------~n-via~~~~~---~~~~i 96 (302)
+++.|+|++.|+---.-...++++.+.+++.|++++..+ +. +. ++.+|.+. ..++|
T Consensus 1 vn~aRdL~n~P~n~~~P~~~a~~~~~~~~~~~v~v~v~~~~~l~~~gmg~llaVg~gS~~~P~lv~l~Y~g~~~~~~~~i 80 (311)
T PF00883_consen 1 VNLARDLVNTPPNILTPETFAEYAKELAKKYGVKVEVLDEKELEKLGMGGLLAVGRGSRHPPRLVVLEYKGNGGKSKKPI 80 (311)
T ss_dssp HHHHHHHHHS-TTTSSHHHHHHHHHHHHHHCTEEEEEEEHHHHHHTT-HHHHHHHTTSSS--EEEEEEEETSTSTTSEEE
T ss_pred ChHHHhhhCCChhhcCHHHHHHHHHHHHhhcCCEEEEEeHHHHHHcCCccEeeecccCCCCCEEEEEEECCCCCCCCccE
Confidence 367899999998666778999999999999998887611 11 11 33344322 13555
Q ss_pred EEEEecccCCCCCCCCCcccc-----ccCCceec-CCCcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC
Q 022137 97 VLRADMDALPLQELVEWEHKS-----KIDGKMHA-CGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (302)
Q Consensus 97 ~l~~H~DtVp~~~~~~w~~~~-----~~~g~l~g-~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 162 (302)
+|.|- +.+|++ +-.+.+.+ +.+++|.|+.+++++++.+. +++.+|..+....|=
T Consensus 81 ~LVGK----------GiTFDtGG~~lKp~~~M~~Mk~DM~GAAaV~ga~~aia~l--k~~vnV~~~l~~~EN 140 (311)
T PF00883_consen 81 ALVGK----------GITFDTGGLSLKPSGGMEGMKYDMGGAAAVLGAMRAIAKL--KLPVNVVAVLPLAEN 140 (311)
T ss_dssp EEEEE----------EEEEEE-TTSSSCSTTGGGGGGGGHHHHHHHHHHHHHHHC--T-SSEEEEEEEEEEE
T ss_pred EEEcc----------eEEEecCCccCCCCcchhhcccCcchHHHHHHHHHHHHHc--CCCceEEEEEEcccc
Confidence 55553 112220 00111221 22358999999999999986 466888888887765
No 87
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only]
Probab=92.97 E-value=1.4 Score=42.08 Aligned_cols=122 Identities=13% Similarity=0.093 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeeec------c-CCceEEEEecCCC-CcEEEEEEecccCCCC
Q 022137 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYP------V-AKTGIVAQIGSGS-RPVVVLRADMDALPLQ 108 (302)
Q Consensus 37 ~~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~------~-~~~nvia~~~~~~-~~~i~l~~H~DtVp~~ 108 (302)
..+...+.|+|...|.---.-...+++..+.+...|+.+++. . .-+.+.+.-++.. .|.++...|.++=|..
T Consensus 188 ~~~~~~lar~l~d~PaN~Mtp~~fae~a~~~~~~~~v~v~V~~~~~i~~~~~~~~l~V~k~s~~pP~ll~lsY~g~~~~~ 267 (513)
T KOG2597|consen 188 KAAAQNLARRLGDTPANRMTPTQFAEEAVDVLCPLGVTVEVRDEEWIEEQGMNSFLAVAKASCEPPRLLELSYKGTSGAD 267 (513)
T ss_pred HHHHHHHHHHhccCChhhcCHHHHHHHHHHhhcccCceEEEechHHHhhccccceeeeccccCCCCEEEEEEEcCCCCCc
Confidence 455677788888777744455889999999999999877651 2 2333444434432 4777778887765433
Q ss_pred CCC-----CCccccccCCc-ee-c------CCCcHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC
Q 022137 109 ELV-----EWEHKSKIDGK-MH-A------CGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (302)
Q Consensus 109 ~~~-----~w~~~~~~~g~-l~-g------~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 162 (302)
..- +.+|+ .+|. |. + |++++|.|+.+++++++.+.+ ++-++.+++.-.|-
T Consensus 268 ~~i~lvGKGvtfD--sGGl~iK~~~~M~~mr~dm~GAA~v~~~~~a~~~l~--~~in~~~v~plcEN 330 (513)
T KOG2597|consen 268 KTILLVGKGVTFD--SGGLSIKPKTGMDGMRRDMGGAAVVLGAFRAAAQLS--LPINVHAVLPLCEN 330 (513)
T ss_pred ceEEEEecceEEe--cCccccccCCChhhhhhhccccHHHHHHHHHHHhcC--CCCceEEEEeeecc
Confidence 211 11222 1111 22 1 233689999999999998764 55899999888877
No 88
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=89.09 E-value=0.85 Score=43.84 Aligned_cols=43 Identities=14% Similarity=0.110 Sum_probs=38.7
Q ss_pred CCeeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 253 QSLVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 253 ~~~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
...|+|++.|+++ |++|.+.+++|+++..+.+++.+.++++++
T Consensus 336 ~~~t~n~g~i~~~------~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~ 378 (477)
T TIGR01893 336 VESSLNLGVVKTK------ENKVIFTFLIRSSVESDKDYVTEKIESIAK 378 (477)
T ss_pred EEeeeeEEEEEEc------CCEEEEEEEeCCCCchhHHHHHHHHHHHhh
Confidence 3578999999876 889999999999999999999999998875
No 89
>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism]
Probab=89.02 E-value=11 Score=36.19 Aligned_cols=118 Identities=16% Similarity=0.146 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcC-CCeeec-------cCCceEEEEecCC-CCcEEEEEEecccCCC
Q 022137 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLG-IPYAYP-------VAKTGIVAQIGSG-SRPVVVLRADMDALPL 107 (302)
Q Consensus 37 ~~~~~~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g-~~~~~~-------~~~~nvia~~~~~-~~~~i~l~~H~DtVp~ 107 (302)
.-+.+.+.|+|++.|.-.-...+.++. .+.|.+.+ +++++. .+.+.+++.=++. ..|.++..-. -+.
T Consensus 166 i~~~v~~aRdLvN~P~n~l~P~~la~~-a~~la~~~~v~veVl~~~~l~~~gmg~llaVg~GS~~~Prlivl~y---~g~ 241 (485)
T COG0260 166 IAEGVNLARDLVNTPANILTPEELAER-AELLAKLGGVKVEVLDEKDLEKLGMGALLAVGKGSARPPRLIVLEY---NGK 241 (485)
T ss_pred HHHHHHHHHHHhhCCcccCCHHHHHHH-HHHHhhcCCceEEEecHHHHHHcCCceeeeeccCCCCCCeEEEEEc---CCC
Confidence 355677999999999866666788888 77777775 777651 2455566665443 2355443322 111
Q ss_pred CCC--------CCCccccccCCc-ee-cCC---C---cHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC
Q 022137 108 QEL--------VEWEHKSKIDGK-MH-ACG---H---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (302)
Q Consensus 108 ~~~--------~~w~~~~~~~g~-l~-g~G---~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 162 (302)
+.. .+.+|+ .+|. |. +.| | .||.|+.++++.++.+. +++.+|..+....|=
T Consensus 242 ~~~~~~iaLVGKGitFD--sGGisiKp~~~M~~MK~DMgGAAaV~g~~~a~a~l--~l~vnv~~vl~~~EN 308 (485)
T COG0260 242 GKAKKPIALVGKGITFD--SGGISIKPAAGMDTMKYDMGGAAAVLGAMRALAEL--KLPVNVVGVLPAVEN 308 (485)
T ss_pred CCCCceEEEEcCceeec--CCCcccCCccchhhhhcccchHHHHHHHHHHHHHc--CCCceEEEEEeeecc
Confidence 110 112222 1222 11 222 3 38999999999999987 577888888887766
No 90
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=82.80 E-value=3 Score=38.14 Aligned_cols=73 Identities=23% Similarity=0.252 Sum_probs=48.1
Q ss_pred CceEEEEecCCCCcEEEEEEecccCCCCCCCCCccccccCCceecCCCcHHHHHHHHHHHHHHhcCCCCCceEEEEEeec
Q 022137 81 KTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPA 160 (302)
Q Consensus 81 ~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~ 160 (302)
..|+|+.-++. +++++..+|.|+=..+. .|+.+ |+++.++++..|...+. .+.++...+
T Consensus 178 ~y~~Ia~~~~e-n~vv~i~AH~DHW~~G~---------tDN~l-------g~~~AV~~~~~lr~~~~----~~~lv~FtA 236 (486)
T COG4882 178 DYNVIAVDGGE-NGVVLIGAHLDHWYTGF---------TDNIL-------GVAQAVETAGRLRGRGL----AAGLVVFTA 236 (486)
T ss_pred EEEEEEecCCC-CCceEEeechhhhhhcc---------cchhh-------hHHHHHHHHHHHhhcCc----ceeEEEEec
Confidence 45566654443 47899999999877663 34554 88999999999986542 244444445
Q ss_pred CC-cc---------CcHHHHHHcC
Q 022137 161 EE-GG---------AGAFHMIKEG 174 (302)
Q Consensus 161 EE-g~---------~G~~~~~~~~ 174 (302)
|| |+ .|++.++++.
T Consensus 237 EE~g~p~~~sfyWa~GSr~~lk~~ 260 (486)
T COG4882 237 EEHGMPGMASFYWAAGSRGLLKES 260 (486)
T ss_pred cccCCCCCcceeecccchHHHhhc
Confidence 66 43 4777777753
No 91
>PRK02256 putative aminopeptidase 1; Provisional
Probab=66.06 E-value=12 Score=35.86 Aligned_cols=43 Identities=26% Similarity=0.279 Sum_probs=28.7
Q ss_pred CCceecCCC--cHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccCc
Q 022137 120 DGKMHACGH--DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGAG 166 (302)
Q Consensus 120 ~g~l~g~G~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G 166 (302)
+..|.|.+. ..++.+++.++..+. .+...++++++..|| |+.|
T Consensus 251 ~efI~s~rLDNr~~~~~~leal~~~~----~~~~~~~~~~~dqEEVGs~g 296 (462)
T PRK02256 251 RSLIGAYGQDDRVCAYTSLEALLELE----NPEKTAVVLLVDKEEIGSEG 296 (462)
T ss_pred cceeeccccccHHHHHHHHHHHHhcc----cCCCeEEEEEEcccccCCcc
Confidence 345666654 367777777665543 456789999999999 5543
No 92
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis. The ste gene cluster (for Streptomyces eps) is involved in exopolysaccharide EPS 139A biosynthesis in Streptomyces sp. 139 []. Members of this group exhibit distant sequence similarity to aminopeptidases (IPR007484 from INTERPRO, MEROPS peptidase family M28).; PDB: 3K9T_A.
Probab=58.96 E-value=40 Score=31.26 Aligned_cols=70 Identities=17% Similarity=0.204 Sum_probs=40.6
Q ss_pred CceEEEEe--cCCCCcEEEEEEecccCCCCCCCCCccccccCCceecCCCcHHHHHHHHHHHHHHhcCCCCCceEEEEEe
Q 022137 81 KTGIVAQI--GSGSRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQ 158 (302)
Q Consensus 81 ~~nvia~~--~~~~~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~ 158 (302)
+.--++++ +|+..+.|+|.+|+.+=... ++.+ +|++.+.+.++.|++.. ...+.+|+|.
T Consensus 115 G~L~ygE~~ipG~s~~EillsthiCHPsmA-----------NdnL------SG~~v~~~La~~L~~~~--~rytYRflf~ 175 (386)
T PF09940_consen 115 GSLTYGEFVIPGESDEEILLSTHICHPSMA-----------NDNL------SGPAVLTFLAKWLKQLP--NRYTYRFLFV 175 (386)
T ss_dssp -EEEEEEEEE--SSS-EEEEEEE----S-T-----------TTTH------HHHHHHHHHHHHHTTS----SSEEEEEEE
T ss_pred CceeEEEEEecCCCCCeEEEEEeccCcccc-----------cccc------cHHHHHHHHHHHHhcCC--cCceEEEEEc
Confidence 33345554 66656899999998874322 1222 79999999999998763 4499999999
Q ss_pred ecCCccCcHHHHHH
Q 022137 159 PAEEGGAGAFHMIK 172 (302)
Q Consensus 159 ~~EEg~~G~~~~~~ 172 (302)
|+=- |+-.++.
T Consensus 176 PeTI---GsI~yLs 186 (386)
T PF09940_consen 176 PETI---GSITYLS 186 (386)
T ss_dssp -TTH---HHHHHHH
T ss_pred cccH---HHHHHHH
Confidence 9633 4444444
No 93
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=56.73 E-value=26 Score=33.80 Aligned_cols=41 Identities=24% Similarity=0.238 Sum_probs=34.4
Q ss_pred eeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 255 LVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 255 ~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
+|+|++.+. .--+.|.+.+++|+++..+.+++.++++++++
T Consensus 344 ~S~Nlg~v~------~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~ 384 (485)
T PRK15026 344 TSLNVGVVT------MTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGK 384 (485)
T ss_pred eeeEEEEEE------EeCCEEEEEEEecCCCchHHHHHHHHHHHHHH
Confidence 677888775 33578999999999999999999999988754
No 94
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=52.87 E-value=2.1e+02 Score=27.91 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=51.7
Q ss_pred CCceEEEEecC--CC-CcEEEEEEecccCCCCCCCCCccccccCCceecCCCcHHHHHHHHHHHHHHhcCCCCCceEEEE
Q 022137 80 AKTGIVAQIGS--GS-RPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRIL 156 (302)
Q Consensus 80 ~~~nvia~~~~--~~-~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~ 156 (302)
.+.|++|.+.. ++ ...+++.+-+++... . -..++++.+|+.++.+++.. -...||.|+
T Consensus 2 ~G~nvy~i~rapR~d~tEaivl~~~~~~~~~--------------~----~n~~~v~l~lal~~~~~~~~-~wsKDii~l 62 (504)
T PF04114_consen 2 SGTNVYGILRAPRGDGTEAIVLVVPWRDSDG--------------E----YNAGGVALALALARYFRRQS-YWSKDIIFL 62 (504)
T ss_pred CceEEEEEEecCCCCCceeEEEEEecCCCCc--------------c----cchhhHHHHHHHHHHhhhch-hhhccEEEE
Confidence 47899999832 33 367888776554321 0 01258999999999999764 468999999
Q ss_pred EeecCCccCcHHHHHHcC
Q 022137 157 FQPAEEGGAGAFHMIKEG 174 (302)
Q Consensus 157 ~~~~EEg~~G~~~~~~~~ 174 (302)
++.+|. .|.+.+++++
T Consensus 63 ~~~~~~--~g~~awl~~Y 78 (504)
T PF04114_consen 63 FTDDEL--AGMQAWLEAY 78 (504)
T ss_pred ecCCcc--hHHHHHHHHH
Confidence 986543 5777777754
No 95
>PRK02813 putative aminopeptidase 2; Provisional
Probab=41.01 E-value=35 Score=32.46 Aligned_cols=30 Identities=17% Similarity=0.273 Sum_probs=21.6
Q ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCe
Q 022137 42 SVRRQIHENPELLFEEHNTSALIRRELDKLGIPY 75 (302)
Q Consensus 42 ~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~ 75 (302)
+++..|-+-|| +..+.+++.++|++.||..
T Consensus 10 ~~~~fl~~s~t----~~hav~~~~~~L~~~Gf~~ 39 (428)
T PRK02813 10 DLLDFIDASPS----PFHAVANVAQRLEAAGFTE 39 (428)
T ss_pred HHHHHHHcCCC----HHHHHHHHHHHHHHcCCee
Confidence 34444544554 5679999999999999874
No 96
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=40.37 E-value=16 Score=29.56 Aligned_cols=32 Identities=13% Similarity=0.037 Sum_probs=27.2
Q ss_pred HHhCCCCCcchHHHHHHHHHHHHhcCCCeeec
Q 022137 47 IHENPELLFEEHNTSALIRRELDKLGIPYAYP 78 (302)
Q Consensus 47 l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~~ 78 (302)
|+-..+..|+-+++|++++..|++.|.++...
T Consensus 4 LIlYstr~GqT~kIA~~iA~~L~e~g~qvdi~ 35 (175)
T COG4635 4 LILYSTRDGQTRKIAEYIASHLRESGIQVDIQ 35 (175)
T ss_pred EEEEecCCCcHHHHHHHHHHHhhhcCCeeeee
Confidence 44566778899999999999999999998763
No 97
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=35.75 E-value=99 Score=29.45 Aligned_cols=28 Identities=18% Similarity=0.275 Sum_probs=22.2
Q ss_pred eEEEEEEecCCcCcccCCeEEEEEEEec
Q 022137 256 VLSVTYVRGGTAFNIIPPFVEFGGTLRS 283 (302)
Q Consensus 256 ~~~~~~i~gg~~~n~iP~~~~~~~diR~ 283 (302)
.+.+..|.+|...|.+|+.|++.+-.+.
T Consensus 190 ~~~i~~~~~Ge~tn~~p~~a~~~v~~~~ 217 (447)
T TIGR01887 190 DVVLESFKAGEAFNMVPDHATAVISGKE 217 (447)
T ss_pred ceeEEEEeCCCcCCccCcceEEEEeccc
Confidence 3446677899999999999888886664
No 98
>PRK02813 putative aminopeptidase 2; Provisional
Probab=35.13 E-value=2.5e+02 Score=26.69 Aligned_cols=35 Identities=26% Similarity=0.078 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-ccC---cHHH
Q 022137 130 VHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-GGA---GAFH 169 (302)
Q Consensus 130 g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~---G~~~ 169 (302)
.++.+++.++..++ . ...++++++..|| |+. ||..
T Consensus 237 ~~~~~~l~al~~~~----~-~~~~~~~~~d~EEVGs~~~~GA~s 275 (428)
T PRK02813 237 SSCHAGLEALLAAA----S-DATNVLAAFDHEEVGSATKQGADS 275 (428)
T ss_pred HHHHHHHHHHHhcC----C-CCeEEEEEEecCccCCCCCcccCc
Confidence 44555554444332 1 6789999999999 665 7764
No 99
>PRK06156 hypothetical protein; Provisional
Probab=33.86 E-value=83 Score=30.63 Aligned_cols=26 Identities=19% Similarity=0.106 Sum_probs=22.4
Q ss_pred eeEEEEEEecCCcCcccCCeEEEEEE
Q 022137 255 LVLSVTYVRGGTAFNIIPPFVEFGGT 280 (302)
Q Consensus 255 ~~~~~~~i~gg~~~n~iP~~~~~~~d 280 (302)
.+.++..++||...|+||+.|.+.+.
T Consensus 239 ~~~~l~~~~gG~~~n~ip~~a~~~~~ 264 (520)
T PRK06156 239 KGAEIVAMTGGAFANQIPQTAVATLS 264 (520)
T ss_pred CceeEEEEEcCCcCCCCCCccEEEEe
Confidence 46778999999999999999998843
No 100
>PRK02256 putative aminopeptidase 1; Provisional
Probab=32.57 E-value=2.2e+02 Score=27.45 Aligned_cols=60 Identities=10% Similarity=0.111 Sum_probs=37.8
Q ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCeee-------------ccCCceEEEEe-cCCC-C-cEEEEEEecccC
Q 022137 42 SVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAY-------------PVAKTGIVAQI-GSGS-R-PVVVLRADMDAL 105 (302)
Q Consensus 42 ~~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~~~-------------~~~~~nvia~~-~~~~-~-~~i~l~~H~DtV 105 (302)
+++..|-+-|| +.-+.+++.++|++.||..-. ......++|.. ++++ + .--+..+|.|.=
T Consensus 30 ~~~~Fl~~spt----p~Hav~~~~~~L~~~GF~el~e~~~l~~g~kyy~~r~~ssliAf~ig~~~~~~g~~iv~aHtDsP 105 (462)
T PRK02256 30 DYKDFLSKCKT----EREAVKEIIELAEEKGFINLEEIIGLKPGDKVYAVNRGKSVALAVIGKEPLEEGLNIIGAHIDSP 105 (462)
T ss_pred HHHHHHHcCCC----HHHHHHHHHHHHHHcCCeecccccccCCCCEEEEEcCCCEEEEEEeCCCCCCCceEEEEEecCCC
Confidence 34455555555 457999999999999997521 11233466654 4332 2 235889999986
No 101
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=31.20 E-value=5.4e+02 Score=25.57 Aligned_cols=91 Identities=12% Similarity=0.198 Sum_probs=58.7
Q ss_pred HHHHHHHHHhcCCCeeecc---------CCceEEEEecC--CC-CcEEEEEEecccCCCCCCCCCccccccCCceecCCC
Q 022137 61 SALIRRELDKLGIPYAYPV---------AKTGIVAQIGS--GS-RPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGH 128 (302)
Q Consensus 61 a~~l~~~l~~~g~~~~~~~---------~~~nvia~~~~--~~-~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~g~G~ 128 (302)
-.|....+++.|.++..-. .+.|+++.+.. ++ ...+++. ||.+.. +++ +
T Consensus 91 ~~~~~~~~q~FGl~t~~~n~~~~P~e~y~G~NvyGilRAPRgdgtEsivl~-----vP~~~~--------~~~------~ 151 (617)
T KOG3566|consen 91 NAWAEVSMQEFGLETHTQNYSNGPFEEYSGENVYGILRAPRGDGTESIVLV-----VPYGRS--------SGS------N 151 (617)
T ss_pred hhHHHHHHHHhCccccccCccCCchhhcCCceEEEEEecCCCCCcceEEEE-----EecccC--------CCc------c
Confidence 3457777788898876522 27899999842 33 3567764 564321 111 1
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCceEEEEEeecCCccCcHHHHHHc
Q 022137 129 DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKE 173 (302)
Q Consensus 129 kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~G~~~~~~~ 173 (302)
.++++.+++.++.++.. .-...||+++++-++ ..|...++++
T Consensus 152 ~~~v~l~lsla~~f~r~-~yWsKDII~v~~d~~--~~g~~AwLea 193 (617)
T KOG3566|consen 152 SASVALLLSLADYFSRW-VYWSKDIIFVFTDGP--ALGLDAWLEA 193 (617)
T ss_pred hhHHHHHHHHHHHhcCC-eeecccEEEEEeCCc--cccHHHHHHH
Confidence 25888888888888754 357899999999663 3466666654
No 102
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=31.07 E-value=1.8e+02 Score=25.43 Aligned_cols=85 Identities=19% Similarity=0.193 Sum_probs=51.9
Q ss_pred CCcEEEEEEecccCCCCCCCCCccccccCCceecCCCcHHHHHHHHHHHHH--HhcCCCCCceEEEEEeecCC--c----
Q 022137 92 SRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLI--HQRKDKLKGTVRILFQPAEE--G---- 163 (302)
Q Consensus 92 ~~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l--~~~~~~~~~~i~~~~~~~EE--g---- 163 (302)
..|++-+.|-+--+...++ .-|. =.+.+|.++++-.|++.+ ++.+..++++|.+.-.-.-. .
T Consensus 30 ~aptlGIiGRLGgigARP~--------~iGl--VSDaDGAi~ala~a~KL~~M~~kGd~L~GDVii~ThIcp~Apt~PH~ 99 (276)
T PF06675_consen 30 SAPTLGIIGRLGGIGARPE--------RIGL--VSDADGAIAALAAALKLLDMQAKGDVLPGDVIITTHICPDAPTRPHD 99 (276)
T ss_pred CCCeeEEEeeccccccccc--------ceee--eecCchHHHHHHHHHHHHHHHHcCCccCCcEEEEEecCCCCCCCCCC
Confidence 3588888888776665431 0011 122346677776676665 45688899999997654433 1
Q ss_pred -------cCcHHHHHHcCCCCCCceEEEee
Q 022137 164 -------GAGAFHMIKEGALGDSEAIFGMH 186 (302)
Q Consensus 164 -------~~G~~~~~~~~~~~~~d~~~~~~ 186 (302)
..+...+.+...-+..|+++.++
T Consensus 100 PvpFM~sPv~~~~~n~~EV~p~mdAILSiD 129 (276)
T PF06675_consen 100 PVPFMGSPVDMATMNRHEVDPEMDAILSID 129 (276)
T ss_pred CcccccCccCHHHHHHhhcCcccceEEEEe
Confidence 13556665554445578888875
No 103
>PRK13562 acetolactate synthase 1 regulatory subunit; Provisional
Probab=30.56 E-value=1.1e+02 Score=21.91 Aligned_cols=45 Identities=16% Similarity=0.095 Sum_probs=34.8
Q ss_pred eeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 255 LVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 255 ~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
.-+|+..+..|...+ |+-..+++-.-.......+++.++++++++
T Consensus 26 Rg~NI~SLtvg~Te~--~~iSRmtivv~~~d~~~ieqI~kQL~Klid 70 (84)
T PRK13562 26 LQYNIDTLHVTHSEQ--PGISNMEIQVDIQDDTSLHILIKKLKQQIN 70 (84)
T ss_pred cCcCeeeEEecccCC--CCceEEEEEEeCCCHHHHHHHHHHHhCCcc
Confidence 456777778777665 888888888866778888999999888764
No 104
>COG3756 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.51 E-value=1.4e+02 Score=23.75 Aligned_cols=62 Identities=10% Similarity=0.060 Sum_probs=41.6
Q ss_pred HHhhhccccccccchhHHH--hHHHHHHHHHhhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHH
Q 022137 6 LLLLLPITYLTTTTAVDEI--LTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRE 67 (302)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~ips~~~~E~~~a~~l~~~ 67 (302)
.+|+|++.+|.++.+.+++ ....+.....+.+..+-..+..+..-..-...-++|-+-|..+
T Consensus 25 aY~LLL~~yw~t~~pip~d~~~~a~~a~~s~krw~av~~~L~~Ff~l~~~~w~~KR~~eeiaa~ 88 (153)
T COG3756 25 AYLLLLMAYWATEKPIPADKAALARAAALSKKRWRAVDAILDEFFSLQGDGWHNKRCDEEIAAQ 88 (153)
T ss_pred HHHHHHHHHHhcCCCCCccHHHHHHHHHHhHHHHHHhHHHHHHHHhhccchHHHHHHHHHHHHH
Confidence 4677778899988776664 3467788888888888888888876655444334444444333
No 105
>PF05418 Apo-VLDL-II: Apovitellenin I (Apo-VLDL-II); InterPro: IPR008404 This family consists of several avian apovitellenin I sequences. As part of the avian reproductive effort, large quantities of triglyceride-rich very-low-density lipoprotein (VLDL) particles are transported by receptor-mediated endocytosis into the female germ cells. Although the oocytes are surrounded by a layer of granulosa cells harbouring high levels of active lipoprotein lipase, non-lipolysed VLDL is transported into the yolk. This is because VLDL particles from laying chickens (Gallus gallus) are protected from lipolysis by apolipoprotein (apo)-VLDL-II, a potent dimeric lipoprotein lipase inhibitor []. Apo-VLDL-II is produced in the liver and secreted into the blood stream when induced by estrogen production in female birds.; GO: 0004857 enzyme inhibitor activity, 0006629 lipid metabolic process, 0042627 chylomicron
Probab=27.31 E-value=2e+02 Score=19.92 Aligned_cols=34 Identities=3% Similarity=0.019 Sum_probs=29.4
Q ss_pred HHHhHHHHHHHHHhhHHHHHHHHHHHHhCCCCCc
Q 022137 22 DEILTNQVMISAQQDKDWLVSVRRQIHENPELLF 55 (302)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ips~~~ 55 (302)
|.++..-+.+.+++..+..-+++.+..++|-.++
T Consensus 15 PdaiA~YiYEavNkvsPr~~qfL~d~~Q~~vv~g 48 (82)
T PF05418_consen 15 PDAIAAYIYEAVNKVSPRVGQFLLDASQTPVVVG 48 (82)
T ss_pred cHHHHHHHHHHHHccChhHHHHHHHHhcccchhH
Confidence 4566777888899999999999999999999886
No 106
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=26.02 E-value=1e+02 Score=29.62 Aligned_cols=29 Identities=14% Similarity=0.180 Sum_probs=19.7
Q ss_pred HHHHHHhCCCCCcchHHHHHHHHHHHHhcCCCe
Q 022137 43 VRRQIHENPELLFEEHNTSALIRRELDKLGIPY 75 (302)
Q Consensus 43 ~~~~l~~ips~~~~E~~~a~~l~~~l~~~g~~~ 75 (302)
++..|-+-|| +..+.+++.++|++.||..
T Consensus 12 ~~~Fl~~s~t----~~hav~~~~~~L~~~GF~~ 40 (465)
T PTZ00371 12 FLNFINKTGS----PFHAVQELKERLKKSGFKQ 40 (465)
T ss_pred HHHHHHcCCC----HHHHHHHHHHHHHHCcCEE
Confidence 3444444444 5678888999999888864
No 107
>PF14133 DUF4300: Domain of unknown function (DUF4300)
Probab=25.76 E-value=3.7e+02 Score=23.59 Aligned_cols=64 Identities=9% Similarity=0.068 Sum_probs=43.4
Q ss_pred HHHHHHHHhCCCCCcc-hHHHHHHHHHHHHhcCCCeeeccCCceEEEEecCCCCcEEEEEEecccCC
Q 022137 41 VSVRRQIHENPELLFE-EHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALP 106 (302)
Q Consensus 41 ~~~~~~l~~ips~~~~-E~~~a~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp 106 (302)
-.+..-+.+||...-+ ...-++-+.+.+++.|++. .+.+-.+|..+-..+....+|.||.=+.-
T Consensus 129 ~~F~~lFs~i~t~~t~D~~~h~~~i~k~wk~rgi~F--~~~k~slISV~~h~~d~~~lFvGH~GVLv 193 (250)
T PF14133_consen 129 EKFTTLFSRIPTENTKDIKVHAEKIQKYWKERGIKF--NNDKASLISVFLHDPDDNSLFVGHTGVLV 193 (250)
T ss_pred HHHHHHhCcCCccccCCHHHHHHHHHHHHHHcCcee--CCCceEEEEEEEEcCCCCeEEeeeEEEEE
Confidence 3344445567765543 3677899999999999988 34455566666322446799999987764
No 108
>PF01221 Dynein_light: Dynein light chain type 1 ; InterPro: IPR001372 Dynein is a multisubunit microtubule-dependent motor enzyme that acts as the force generating protein of eukaryotic cilia and flagella. The cytoplasmic isoform of dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein is composed of a number of ATP-binding large subunits (see IPR004273 from INTERPRO), intermediate size subunits and small subunits. Among the small subunits, there is a family of highly conserved proteins which make up this family [, ]. Both type 1 (DLC1) and 2 (DLC2) dynein light chains have a similar two-layer alpha-beta core structure consisting of beta-alpha(2)-beta-X-beta(2) [, ].; GO: 0007017 microtubule-based process, 0005875 microtubule associated complex; PDB: 1F95_A 1F96_A 1F3C_A 3P8M_B 2XQQ_C 1RE6_A 1CMI_A 1PWK_A 1PWJ_A 4DS1_C ....
Probab=25.26 E-value=1.6e+02 Score=20.97 Aligned_cols=16 Identities=38% Similarity=0.665 Sum_probs=14.1
Q ss_pred chHHHHHHHHHHHHhc
Q 022137 56 EEHNTSALIRRELDKL 71 (302)
Q Consensus 56 ~E~~~a~~l~~~l~~~ 71 (302)
.|.++|++|.+.|.+.
T Consensus 34 ~~~eiA~~iK~~lD~~ 49 (89)
T PF01221_consen 34 DEKEIAEFIKQELDKK 49 (89)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcc
Confidence 5688999999999986
No 109
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=24.00 E-value=3.3e+02 Score=26.27 Aligned_cols=34 Identities=24% Similarity=0.207 Sum_probs=19.9
Q ss_pred CCCeeeccCCceEEEEe-cCCC----CcEEEEEEecccC
Q 022137 72 GIPYAYPVAKTGIVAQI-GSGS----RPVVVLRADMDAL 105 (302)
Q Consensus 72 g~~~~~~~~~~nvia~~-~~~~----~~~i~l~~H~DtV 105 (302)
|-++-.......++|.. +++. ..--+..+|.|.=
T Consensus 52 g~kyyv~r~~ssl~Af~vg~~~~~~~~g~~ivgaHtDsP 90 (465)
T PTZ00371 52 GGKYYLTRNNSTIVAFTVGKKFDAPNGGFKIVGAHTDSP 90 (465)
T ss_pred CCEEEEEcCCcEEEEEEeCCCCccCCCCeEEEEEeccCC
Confidence 44443344455677765 4431 1346889999975
No 110
>COG1362 LAP4 Aspartyl aminopeptidase [Amino acid transport and metabolism]
Probab=23.66 E-value=4.2e+02 Score=25.22 Aligned_cols=49 Identities=20% Similarity=0.167 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHHHhcCCCeee---------------ccCCceEEEEe-cCC---CCcEEEEEEecccC
Q 022137 57 EHNTSALIRRELDKLGIPYAY---------------PVAKTGIVAQI-GSG---SRPVVVLRADMDAL 105 (302)
Q Consensus 57 E~~~a~~l~~~l~~~g~~~~~---------------~~~~~nvia~~-~~~---~~~~i~l~~H~DtV 105 (302)
+..++.+++++|.+.||..-. ...+.+++|.+ +.+ ..+--++.+|+|.=
T Consensus 23 pyh~v~~i~~~L~~~Gf~~l~e~~~w~~~~ggkyf~~r~gssliAf~ig~~~~~~~gf~IigaHtDSP 90 (437)
T COG1362 23 PYHVVANIAERLLKAGFRELEEKDAWKDKPGGKYFVTRNGSSLIAFIIGKKWKLESGFRIIGAHTDSP 90 (437)
T ss_pred hHHHHHHHHHHHHHcCchhhhhhhcccccCCCeEEEEcCCceEEEEEecCCCCCCCCeEEEEeecCCC
Confidence 567999999999999987532 12345677776 332 13567789999975
No 111
>PRK11152 ilvM acetolactate synthase 2 regulatory subunit; Provisional
Probab=23.62 E-value=2.2e+02 Score=19.88 Aligned_cols=43 Identities=9% Similarity=-0.010 Sum_probs=30.7
Q ss_pred eeEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 255 LVLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 255 ~~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
.-+|+..+..|... -|+...+.+-.. .....+.+.++++++.+
T Consensus 27 RGfnI~sl~v~~t~--~~~~sriti~v~--~~~~i~ql~kQL~KL~d 69 (76)
T PRK11152 27 RGFQVCSMNMTQNT--DAQNINIELTVA--SERPIDLLSSQLNKLVD 69 (76)
T ss_pred CCeeeeeEEeeecC--CCCEEEEEEEEC--CCchHHHHHHHHhcCcC
Confidence 34567777766544 377778877774 68888899998888754
No 112
>COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family [Energy production and conversion]
Probab=23.26 E-value=2.5e+02 Score=25.79 Aligned_cols=46 Identities=20% Similarity=0.224 Sum_probs=35.9
Q ss_pred HHhhHHHHHHHHHHHHhCCCCCcch--HHHHHHHHHHHHhcCCCeeec
Q 022137 33 AQQDKDWLVSVRRQIHENPELLFEE--HNTSALIRRELDKLGIPYAYP 78 (302)
Q Consensus 33 ~~~~~~~~~~~~~~l~~ips~~~~E--~~~a~~l~~~l~~~g~~~~~~ 78 (302)
.++.+..+.++...+..+...+.+| .+.-+.++++++++|.+.+..
T Consensus 294 ~~~k~~k~~q~a~rV~gi~~g~~~e~i~~~I~ktr~ff~slGv~trls 341 (384)
T COG1979 294 LDQKRAKLLQYAERVWGITEGSDDEIIDEAIAKTREFFESLGVPTRLS 341 (384)
T ss_pred HhhcHHHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHcCCccchh
Confidence 4445688889999999998766555 666788899999999988753
No 113
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=22.57 E-value=52 Score=31.13 Aligned_cols=68 Identities=19% Similarity=0.187 Sum_probs=38.2
Q ss_pred cEEEEEEecccCCC-CCCCCCcccc------ccCCcee-cCCCc-HHHHHHHHHHHHHHhcCCCCCceEEEEEeecCC-c
Q 022137 94 PVVVLRADMDALPL-QELVEWEHKS------KIDGKMH-ACGHD-VHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE-G 163 (302)
Q Consensus 94 ~~i~l~~H~DtVp~-~~~~~w~~~~------~~~g~l~-g~G~k-g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g 163 (302)
.+++|.||+|.||. +...+.-+.+ .++.++- ..|.+ -+++++++.+.- ...++...++.+|| +
T Consensus 62 ~~~~L~a~~d~V~~i~~~sh~Dt~~d~~~~~v~~~~l~~~~Gad~i~~~~~~a~L~~-------~~~P~~~~~t~~~ei~ 134 (414)
T COG2195 62 VPAVLQAHLDMVPEIGFISHHDTVPDPIGPNVNPQILKATLGADNIGLAIGLAVLSP-------EHFPLEVLLTGDEEIT 134 (414)
T ss_pred eeEEeeccccccccccccccccccccccccccCCceeeeccCcchhhhhhHHhhcCc-------ccCCceeeeecceEEe
Confidence 67889999999994 4433333332 2344555 45533 333333332221 35678888999888 4
Q ss_pred cCcHH
Q 022137 164 GAGAF 168 (302)
Q Consensus 164 ~~G~~ 168 (302)
..|+-
T Consensus 135 ~dGa~ 139 (414)
T COG2195 135 TDGAT 139 (414)
T ss_pred ccCcc
Confidence 44433
No 114
>cd06411 PB1_p51 The PB1 domain is present in the p51 protein, a homolog of the p67 protein. p51 plays an important role in NADPH oxidase activation during phagosytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain mo
Probab=22.30 E-value=1.8e+02 Score=20.53 Aligned_cols=28 Identities=18% Similarity=0.103 Sum_probs=24.5
Q ss_pred eEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 274 FVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 274 ~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
+|.+++-+|.+++.+...+.+.|.+-++
T Consensus 4 h~~fTVai~v~~g~~y~~L~~~ls~kL~ 31 (78)
T cd06411 4 QCAFTVALRAPRGADVSSLRALLSQALP 31 (78)
T ss_pred EEEEEEEEEccCCCCHHHHHHHHHHHhc
Confidence 6889999999999999999998877654
No 115
>PRK06737 acetolactate synthase 1 regulatory subunit; Validated
Probab=21.49 E-value=2.9e+02 Score=19.32 Aligned_cols=43 Identities=14% Similarity=-0.035 Sum_probs=30.6
Q ss_pred eEEEEEEecCCcCcccCCeEEEEEEEecCChhhHHHHHHHHHHhhh
Q 022137 256 VLSVTYVRGGTAFNIIPPFVEFGGTLRSLTTEGLYQLQKRLKEFDR 301 (302)
Q Consensus 256 ~~~~~~i~gg~~~n~iP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (302)
-+|+..+..|...+ |+...+++-.- ......+.+.++++++++
T Consensus 27 gfNI~Sl~vg~te~--~~~sriti~~~-~~~~~i~qi~kQL~KLid 69 (76)
T PRK06737 27 GYYISSLNLNERDT--SGVSEMKLTAV-CTENEATLLVSQLKKLIN 69 (76)
T ss_pred CcceEEEEecccCC--CCeeEEEEEEE-CCHHHHHHHHHHHhCCcC
Confidence 45666767665443 77777777765 567788888888887764
Done!