Query 022138
Match_columns 302
No_of_seqs 38 out of 40
Neff 3.1
Searched_HMMs 13730
Date Mon Mar 25 14:34:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022138.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022138hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1gmua2 d.58.38.1 (A:71-138) U 7.0 82 0.006 21.7 1.4 11 276-286 13-23 (68)
2 d1pw4a_ f.38.1.1 (A:) Glycerol 4.9 5.1E+02 0.037 19.7 5.3 40 109-148 276-315 (447)
3 d1oeda_ f.36.1.1 (A:) Acetylch 4.2 2.7E+02 0.019 21.1 3.0 22 90-111 8-29 (227)
4 d1dlca3 f.1.3.1 (A:61-289) del 3.9 1.1E+02 0.0081 24.5 0.4 9 184-192 33-41 (229)
5 d1oedc_ f.36.1.1 (C:) Acetylch 3.5 3.5E+02 0.025 20.4 3.1 22 90-111 8-29 (260)
6 d2ayxa2 c.23.1.6 (A:700-816) S 3.2 3.5E+02 0.026 20.3 2.8 29 273-301 18-46 (117)
7 d2o0qa1 d.166.1.7 (A:2-114) Hy 3.1 1.4E+02 0.0099 21.9 0.1 10 28-37 79-88 (113)
8 d1eara2 d.58.38.1 (A:75-142) U 3.0 2.4E+02 0.017 19.0 1.4 12 276-287 13-24 (68)
9 d1gqva_ d.5.1.1 (A:) Eosinophi 3.0 1.9E+02 0.014 22.0 0.9 11 223-233 119-129 (135)
10 d1oedb_ f.36.1.1 (B:) Acetylch 2.9 4.1E+02 0.03 20.0 3.0 22 90-111 8-29 (250)
No 1
>d1gmua2 d.58.38.1 (A:71-138) Urease metallochaperone UreE, C-terminal domain {Klebsiella aerogenes [TaxId: 28451]}
Probab=6.99 E-value=82 Score=21.70 Aligned_cols=11 Identities=18% Similarity=0.392 Sum_probs=9.2
Q ss_pred HHHHHHHHhhh
Q 022138 276 VQLMRVAWFAG 286 (302)
Q Consensus 276 ~fLMr~aW~~g 286 (302)
..|+|+||+-|
T Consensus 13 ~~L~r~A~HLG 23 (68)
T d1gmua2 13 FMLAKACYALG 23 (68)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 35899999988
No 2
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=4.95 E-value=5.1e+02 Score=19.68 Aligned_cols=40 Identities=15% Similarity=-0.049 Sum_probs=20.9
Q ss_pred hhhhcCCccHHHHHHHHhhhHHHHHHHHHHHHhhhccccc
Q 022138 109 ISSIFLGPNIASLLSLIGLDCIFNIGATLFLLMADSCARS 148 (302)
Q Consensus 109 issif~~~~la~lLsLf~~ealFyiGatlFLlmaD~~~Rp 148 (302)
+...++-+....-...........+|..+.-.+.||..|.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 315 (447)
T d1pw4a_ 276 LKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRG 315 (447)
T ss_dssp BTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred cccccccccchhhhhhhcchhhhhhhhhhhhhhhhhcccc
Confidence 3444443433333333444444555666666778887663
No 3
>d1oeda_ f.36.1.1 (A:) Acetylcholine receptor protein, alpha chain {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}
Probab=4.23 E-value=2.7e+02 Score=21.14 Aligned_cols=22 Identities=27% Similarity=0.537 Sum_probs=19.8
Q ss_pred hhhhHHhhhhccccccccchhh
Q 022138 90 LLGPCILLGTGMVPTLWLPISS 111 (302)
Q Consensus 90 LlGP~vLvaS~i~P~l~Lpiss 111 (302)
++.|++++....+=.||+|-++
T Consensus 8 li~P~~li~~ls~~~F~lp~~s 29 (227)
T d1oeda_ 8 VIIPCLLFSFLTGLVFYLPTDS 29 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHheecCCC
Confidence 6789999999999999999876
No 4
>d1dlca3 f.1.3.1 (A:61-289) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis tenebrionis, CRYIIIA (BT13) [TaxId: 1444]}
Probab=3.89 E-value=1.1e+02 Score=24.46 Aligned_cols=9 Identities=11% Similarity=0.039 Sum_probs=4.9
Q ss_pred hcccCcccC
Q 022138 184 GSQKGFLQP 192 (302)
Q Consensus 184 g~~~G~~wP 192 (302)
+..+|.+||
T Consensus 33 ~~i~~~lwP 41 (229)
T d1dlca3 33 TNFLNTIWP 41 (229)
T ss_dssp HHHHHHTSS
T ss_pred HHHHHHhCC
Confidence 334566666
No 5
>d1oedc_ f.36.1.1 (C:) Acetylcholine receptor protein, delta chain {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}
Probab=3.45 E-value=3.5e+02 Score=20.43 Aligned_cols=22 Identities=27% Similarity=0.643 Sum_probs=19.4
Q ss_pred hhhhHHhhhhccccccccchhh
Q 022138 90 LLGPCILLGTGMVPTLWLPISS 111 (302)
Q Consensus 90 LlGP~vLvaS~i~P~l~Lpiss 111 (302)
++.|+++++...+=.||+|-++
T Consensus 8 ~~~P~~~~~~l~~~~f~lp~~~ 29 (260)
T d1oedc_ 8 FITPCVLISFLASLAFYLPAES 29 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHeeeCCCC
Confidence 6789999999999999999775
No 6
>d2ayxa2 c.23.1.6 (A:700-816) Sensor kinase protein RcsC {Escherichia coli [TaxId: 562]}
Probab=3.19 E-value=3.5e+02 Score=20.28 Aligned_cols=29 Identities=21% Similarity=0.139 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHhhhccccccccCCCCCCC
Q 022138 273 ILGVQLMRVAWFAGFTSQARRQQSPASAD 301 (302)
Q Consensus 273 ~lg~fLMr~aW~~g~~~~~~~~~~~~~~~ 301 (302)
.|..||+|+.=.+|++.+....|.+.+.|
T Consensus 18 ~Le~fL~~lL~~~G~~v~ry~~q~~~~~D 46 (117)
T d2ayxa2 18 SLCQFLETSLQRSGIVVTTYEGQEPTPED 46 (117)
T ss_dssp HHHHHHHHHHTTTTEEEEECSSCCCCTTC
T ss_pred HHHHHHHHHHHhCCcEEEEecCCCCCccc
Confidence 45899999999999999888877775544
No 7
>d2o0qa1 d.166.1.7 (A:2-114) Hypothetical protein CC0527 {Caulobacter crescentus [TaxId: 155892]}
Probab=3.07 E-value=1.4e+02 Score=21.86 Aligned_cols=10 Identities=20% Similarity=0.129 Sum_probs=7.8
Q ss_pred ecccccccCC
Q 022138 28 NFKTSHAPTD 37 (302)
Q Consensus 28 ~f~~~~~~~~ 37 (302)
.||++|++-.
T Consensus 79 ~FPHlYG~L~ 88 (113)
T d2o0qa1 79 RFPHLYRPLL 88 (113)
T ss_dssp EEEEESSCEE
T ss_pred ccccccCCCC
Confidence 5999998643
No 8
>d1eara2 d.58.38.1 (A:75-142) Urease metallochaperone UreE, C-terminal domain {Bacillus pasteurii [TaxId: 1474]}
Probab=2.97 E-value=2.4e+02 Score=19.02 Aligned_cols=12 Identities=17% Similarity=0.241 Sum_probs=9.2
Q ss_pred HHHHHHHHhhhc
Q 022138 276 VQLMRVAWFAGF 287 (302)
Q Consensus 276 ~fLMr~aW~~g~ 287 (302)
..++|+||+-|=
T Consensus 13 ~el~~~a~hlGN 24 (68)
T d1eara2 13 QEMGKMAFEIGN 24 (68)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC
Confidence 357899999873
No 9
>d1gqva_ d.5.1.1 (A:) Eosinophil-derived neurotoxin (EDN) {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.96 E-value=1.9e+02 Score=22.03 Aligned_cols=11 Identities=36% Similarity=0.667 Sum_probs=5.1
Q ss_pred cCCceeeeeee
Q 022138 223 WQSPVWLVTPV 233 (302)
Q Consensus 223 ~kSpvWp~VPi 233 (302)
|.||-||+||+
T Consensus 119 ~d~~~~p~vPV 129 (135)
T d1gqva_ 119 RDPPQYPVVPV 129 (135)
T ss_dssp TSCTTCSEEEE
T ss_pred CCCCCCCccce
Confidence 44444444444
No 10
>d1oedb_ f.36.1.1 (B:) Acetylcholine receptor protein, beta chain {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}
Probab=2.93 E-value=4.1e+02 Score=20.03 Aligned_cols=22 Identities=27% Similarity=0.593 Sum_probs=19.3
Q ss_pred hhhhHHhhhhccccccccchhh
Q 022138 90 LLGPCILLGTGMVPTLWLPISS 111 (302)
Q Consensus 90 LlGP~vLvaS~i~P~l~Lpiss 111 (302)
++.|+++++...+=.||+|-++
T Consensus 8 ~~~P~~~i~~l~~~~f~~p~~~ 29 (250)
T d1oedb_ 8 TIIPCILISILAILVFYLPPDA 29 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHheecCCC
Confidence 6789999999999999999765
Done!