Query 022145
Match_columns 302
No_of_seqs 260 out of 1452
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 08:23:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022145.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022145hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02370 acyl-ACP thioesterase 100.0 7E-56 1.5E-60 429.1 21.2 242 50-298 94-336 (419)
2 PF01643 Acyl-ACP_TE: Acyl-ACP 100.0 5.7E-45 1.2E-49 335.8 14.3 194 100-298 1-200 (261)
3 COG3884 FatA Acyl-ACP thioeste 100.0 9.7E-32 2.1E-36 238.1 10.5 183 102-298 3-187 (250)
4 PRK10800 acyl-CoA thioesterase 100.0 1.2E-27 2.7E-32 197.5 16.9 128 102-236 2-129 (130)
5 TIGR02799 thio_ybgC tol-pal sy 99.9 2.4E-25 5.2E-30 181.8 15.4 124 103-234 1-125 (126)
6 COG0824 FcbC Predicted thioest 99.9 5.6E-25 1.2E-29 184.5 16.2 132 100-239 3-134 (137)
7 TIGR00051 acyl-CoA thioester h 99.9 1.3E-24 2.8E-29 174.4 14.4 117 106-229 1-117 (117)
8 PF13279 4HBT_2: Thioesterase- 99.9 4.6E-21 9.9E-26 155.5 15.4 119 109-236 1-121 (121)
9 PRK07531 bifunctional 3-hydrox 99.9 5.7E-21 1.2E-25 190.9 15.5 131 102-240 345-475 (495)
10 cd00586 4HBT 4-hydroxybenzoyl- 99.7 3.5E-17 7.7E-22 127.4 13.9 110 103-219 1-110 (110)
11 cd03442 BFIT_BACH Brown fat-in 99.4 1E-11 2.2E-16 99.9 15.8 113 101-229 6-123 (123)
12 cd03440 hot_dog The hotdog fol 99.0 1E-08 2.2E-13 74.7 13.2 98 104-215 2-99 (100)
13 PF03061 4HBT: Thioesterase su 98.9 2.2E-08 4.7E-13 74.3 12.2 79 117-209 1-79 (79)
14 cd03443 PaaI_thioesterase PaaI 98.8 3.1E-07 6.8E-12 72.6 14.2 101 101-216 12-112 (113)
15 PF01643 Acyl-ACP_TE: Acyl-ACP 98.8 5.1E-08 1.1E-12 90.1 10.8 97 99-215 162-259 (261)
16 PLN02370 acyl-ACP thioesterase 98.5 5.7E-07 1.2E-11 88.3 9.7 96 103-218 302-403 (419)
17 PRK10694 acyl-CoA esterase; Pr 98.5 6.4E-06 1.4E-10 68.9 14.3 112 103-230 12-131 (133)
18 COG1607 Acyl-CoA hydrolase [Li 98.1 0.00013 2.9E-09 62.5 14.6 114 104-232 15-132 (157)
19 COG3884 FatA Acyl-ACP thioeste 97.9 5.7E-05 1.2E-09 68.2 8.4 88 102-215 152-239 (250)
20 TIGR00369 unchar_dom_1 unchara 97.8 0.0006 1.3E-08 54.9 13.2 99 103-216 18-116 (117)
21 TIGR02286 PaaD phenylacetic ac 97.7 0.0017 3.7E-08 52.1 13.7 98 103-217 16-113 (114)
22 PLN02647 acyl-CoA thioesterase 97.5 0.0021 4.5E-08 63.8 13.2 116 108-230 99-221 (437)
23 PRK10293 acyl-CoA esterase; Pr 97.4 0.008 1.7E-07 50.3 14.2 102 102-218 35-136 (136)
24 PRK10254 thioesterase; Provisi 97.2 0.023 4.9E-07 47.7 15.2 102 102-218 35-136 (137)
25 PRK11688 hypothetical protein; 97.2 0.012 2.5E-07 50.1 13.2 111 103-217 39-153 (154)
26 COG5496 Predicted thioesterase 97.1 0.029 6.2E-07 46.4 13.8 110 98-222 2-118 (130)
27 cd00586 4HBT 4-hydroxybenzoyl- 97.0 0.00021 4.5E-09 54.9 0.7 29 267-295 4-32 (110)
28 COG2050 PaaI HGG motif-contain 97.0 0.028 6.1E-07 46.9 13.7 105 102-220 35-139 (141)
29 cd03449 R_hydratase (R)-hydrat 96.6 0.03 6.5E-07 45.0 10.4 57 158-215 68-126 (128)
30 KOG3328 HGG motif-containing t 96.5 0.035 7.5E-07 47.1 10.4 102 102-217 38-139 (148)
31 PLN02322 acyl-CoA thioesterase 96.4 0.18 3.9E-06 43.2 14.4 104 102-219 27-135 (154)
32 PRK07531 bifunctional 3-hydrox 96.3 0.0013 2.9E-08 66.2 0.9 29 266-294 348-376 (495)
33 PF12590 Acyl-thio_N: Acyl-ATP 96.0 0.0011 2.3E-08 54.2 -1.4 28 49-78 96-123 (129)
34 PLN02647 acyl-CoA thioesterase 95.4 0.44 9.5E-06 47.5 14.3 117 102-232 290-416 (437)
35 PRK00006 fabZ (3R)-hydroxymyri 95.2 1.5 3.3E-05 36.4 16.4 130 73-219 8-146 (147)
36 PRK13691 (3R)-hydroxyacyl-ACP 95.2 0.25 5.5E-06 42.7 10.6 63 161-224 85-151 (166)
37 cd03455 SAV4209 SAV4209 is a S 95.2 0.17 3.6E-06 41.0 8.9 55 160-215 67-122 (123)
38 cd00556 Thioesterase_II Thioes 95.0 0.16 3.4E-06 38.8 7.9 58 158-216 41-98 (99)
39 PF14539 DUF4442: Domain of un 94.8 0.74 1.6E-05 38.0 11.8 99 102-216 30-131 (132)
40 cd01288 FabZ FabZ is a 17kD be 94.7 0.32 6.9E-06 39.2 9.4 86 120-217 45-130 (131)
41 TIGR01750 fabZ beta-hydroxyacy 94.7 1.9 4E-05 35.5 14.1 104 102-216 29-139 (140)
42 cd03441 R_hydratase_like (R)-h 94.5 0.4 8.6E-06 38.1 9.3 56 158-214 66-125 (127)
43 PRK13692 (3R)-hydroxyacyl-ACP 94.5 0.53 1.2E-05 40.3 10.5 60 163-223 87-150 (159)
44 COG4109 Predicted transcriptio 94.3 0.31 6.6E-06 47.1 9.4 102 96-214 326-427 (432)
45 cd03447 FAS_MaoC FAS_MaoC, the 94.2 0.58 1.3E-05 38.4 9.9 53 161-214 69-122 (126)
46 cd03454 YdeM YdeM is a Bacillu 94.1 0.28 6.1E-06 40.4 7.9 51 165-216 81-138 (140)
47 cd03446 MaoC_like MoaC_like 94.1 0.5 1.1E-05 38.7 9.3 51 165-216 83-139 (140)
48 cd03453 SAV4209_like SAV4209_l 93.9 0.49 1.1E-05 38.5 8.8 51 163-214 71-125 (127)
49 PRK04424 fatty acid biosynthes 93.5 0.74 1.6E-05 40.4 9.8 59 157-217 123-181 (185)
50 cd03451 FkbR2 FkbR2 is a Strep 93.5 0.43 9.4E-06 39.3 8.0 52 165-217 84-142 (146)
51 cd00493 FabA_FabZ FabA/Z, beta 93.0 3.8 8.2E-05 32.6 13.4 86 117-212 41-126 (131)
52 PF13452 MaoC_dehydrat_N: N-te 91.9 0.64 1.4E-05 37.7 6.8 52 158-210 73-131 (132)
53 cd03452 MaoC_C MaoC_C The C-t 91.3 1.2 2.5E-05 37.1 7.9 52 165-217 81-138 (142)
54 PRK08190 bifunctional enoyl-Co 91.1 1.9 4.1E-05 43.3 10.5 66 159-225 82-149 (466)
55 TIGR02447 yiiD_Cterm thioester 90.6 8.8 0.00019 31.8 12.8 101 103-218 24-137 (138)
56 cd03445 Thioesterase_II_repeat 89.2 3 6.5E-05 32.4 8.1 53 161-215 40-92 (94)
57 PF13622 4HBT_3: Thioesterase- 88.7 3.1 6.7E-05 37.5 9.1 57 160-219 34-90 (255)
58 PLN02864 enoyl-CoA hydratase 88.7 2.6 5.6E-05 40.1 8.8 59 161-219 95-157 (310)
59 cd03442 BFIT_BACH Brown fat-in 88.5 0.3 6.5E-06 38.5 2.0 29 266-294 10-38 (123)
60 cd03440 hot_dog The hotdog fol 87.0 0.25 5.5E-06 34.8 0.7 28 267-294 4-31 (100)
61 KOG4366 Predicted thioesterase 86.9 0.19 4.1E-06 44.3 -0.1 102 109-219 57-161 (213)
62 PRK13188 bifunctional UDP-3-O- 81.5 56 0.0012 33.0 14.7 60 158-219 401-461 (464)
63 cd03444 Thioesterase_II_repeat 80.3 12 0.00027 29.4 7.9 57 159-216 47-103 (104)
64 COG2030 MaoC Acyl dehydratase 78.2 17 0.00037 30.9 8.7 59 159-218 93-155 (159)
65 cd01289 FabA_like Domain of un 75.7 44 0.00095 27.6 13.4 102 104-215 28-134 (138)
66 TIGR00189 tesB acyl-CoA thioes 75.7 10 0.00022 34.7 7.1 53 162-216 46-98 (271)
67 PF03756 AfsA: A-factor biosyn 73.6 47 0.001 26.9 12.4 59 157-217 69-132 (132)
68 cd03448 HDE_HSD HDE_HSD The R 71.1 24 0.00052 28.6 7.5 48 160-212 70-117 (122)
69 COG1946 TesB Acyl-CoA thioeste 70.0 66 0.0014 30.4 10.9 106 104-218 177-283 (289)
70 PF02551 Acyl_CoA_thio: Acyl-C 68.9 33 0.00072 28.7 7.8 100 105-215 30-130 (131)
71 PF07977 FabA: FabA-like domai 68.5 63 0.0014 26.3 12.9 88 117-212 47-138 (138)
72 COG0764 FabA 3-hydroxymyristoy 67.7 76 0.0016 26.9 10.0 60 158-219 85-145 (147)
73 PF01575 MaoC_dehydratas: MaoC 66.7 13 0.00027 29.8 4.9 33 158-190 74-106 (122)
74 cd03450 NodN NodN (nodulation 65.5 71 0.0015 26.8 9.5 30 159-188 84-113 (149)
75 cd01287 FabA FabA, beta-hydrox 65.2 65 0.0014 27.2 9.2 93 117-218 49-147 (150)
76 PRK10526 acyl-CoA thioesterase 65.1 26 0.00057 32.7 7.4 55 160-216 55-109 (286)
77 KOG4366 Predicted thioesterase 63.6 1.9 4.2E-05 38.1 -0.5 18 271-288 58-76 (213)
78 PRK11563 bifunctional aldehyde 60.3 29 0.00062 36.6 7.4 49 166-215 617-671 (675)
79 TIGR02278 PaaN-DH phenylacetic 59.9 28 0.0006 36.7 7.2 50 165-215 604-659 (663)
80 TIGR00189 tesB acyl-CoA thioes 56.5 1.6E+02 0.0034 26.8 11.9 55 161-216 215-269 (271)
81 PF13622 4HBT_3: Thioesterase- 56.2 1E+02 0.0022 27.5 9.5 54 162-216 200-254 (255)
82 PLN02864 enoyl-CoA hydratase 52.7 86 0.0019 29.8 8.6 51 160-215 253-303 (310)
83 PRK10526 acyl-CoA thioesterase 52.6 72 0.0016 29.7 8.0 60 158-218 224-283 (286)
84 PRK13693 (3R)-hydroxyacyl-ACP 46.6 1.7E+02 0.0036 24.2 9.1 51 163-214 81-138 (142)
85 PLN02868 acyl-CoA thioesterase 41.4 78 0.0017 31.0 6.7 54 161-216 182-235 (413)
86 PF09500 YiiD_Cterm: Putative 35.7 2.7E+02 0.0059 23.5 11.7 90 113-218 39-143 (144)
87 PLN02868 acyl-CoA thioesterase 33.3 1.2E+02 0.0026 29.7 6.5 55 161-216 358-412 (413)
88 PF11456 DUF3019: Protein of u 31.3 1.4E+02 0.003 23.7 5.4 34 196-229 66-99 (102)
89 PHA02582 10 baseplate wedge su 23.0 1.6E+02 0.0035 30.4 5.3 73 156-229 217-292 (604)
90 PRK02770 S-adenosylmethionine 22.7 2.3E+02 0.0051 23.8 5.5 34 102-135 16-49 (139)
91 PRK01706 S-adenosylmethionine 20.9 3E+02 0.0066 22.5 5.8 33 103-135 6-38 (123)
92 PRK01236 S-adenosylmethionine 20.9 3E+02 0.0066 22.8 5.8 32 104-135 6-37 (131)
93 KOG2763 Acyl-CoA thioesterase 20.7 4.2E+02 0.0091 25.9 7.5 72 158-230 59-136 (357)
94 TIGR03330 SAM_DCase_Bsu S-aden 20.1 2.9E+02 0.0063 22.1 5.4 31 105-135 5-35 (112)
No 1
>PLN02370 acyl-ACP thioesterase
Probab=100.00 E-value=7e-56 Score=429.11 Aligned_cols=242 Identities=51% Similarity=0.907 Sum_probs=212.8
Q ss_pred cccccceeeeehhhhhhccccccchhhhhccCCCCccccCcccccccccCCceEEEEEEeeeCCCCCCCCcCHHHHHHHH
Q 022145 50 SQTTGVASTFVASVAAEKEGCRINEVQIRQNIPTKKQFVDPYRHGLIIEGGVGYRQTVVVRSYEVGPDKTATLESILNLF 129 (302)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~f~~~~~Vr~~D~D~~G~v~~~~yl~~~ 129 (302)
||.++++||||. ||||||+.++++.-| ++.++|+|..|+++++|..|+++++||+||||.+|+++++.+++||
T Consensus 94 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~y~~~f~Ir~yEvD~~g~lsl~~L~n~l 166 (419)
T PLN02370 94 SMLLAAITTIFL--AAEKQWMMLDWKPRR-----SDMLIDPFGIGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHL 166 (419)
T ss_pred HHHHHHHHHHHH--hhhhhhhhhcccCCC-----CcccccccccCceeccCcEEEEEEEEeeEEECCCCCCCHHHHHHHH
Confidence 678889999998 999999999977666 6899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEEEEEEeeeCCceEEEEEEEEEcCCCcEEE
Q 022145 130 QETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFA 209 (302)
Q Consensus 130 qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I~Twv~~~g~~~~~R~f~I~d~~~Gelia 209 (302)
||++..|+...|+++.||+...+|.+.|++|||++++|+|.|+|+|||+|+|+||+.+++++++.|+|+|++.++|++++
T Consensus 167 Qd~A~~Hs~~lGll~~Gfg~~~~m~~~gl~WVLtr~~I~~~R~P~~gD~V~V~Twv~~~~k~~~~Rdf~I~D~~~Ge~la 246 (419)
T PLN02370 167 QETALNHVKTAGLLGDGFGSTPEMSKRNLIWVVTRMQVLVDRYPTWGDVVQVDTWVSASGKNGMRRDWLVRDCKTGETLT 246 (419)
T ss_pred HHHHHHHHHHhCccccccccHHHHHhCCceEEEEEEEEEeCcCCCCCCEEEEEEEEeeCCCCEEEEEEEEEECCCCeEEE
Confidence 99999998765655556765446889999999999999999999999999999999999999999999999845899999
Q ss_pred EEEEEEEEEecCCCccccCCHHHHHhhCccccccccccccCcccccCCCcc-ccccccccccCCCCCcccCCCchHHHHH
Q 022145 210 RATSTWVMMNQQTRRLSKIPAEVRAEISPWFIDKQAIIEDVPEKISKLDDT-AKYVNSDLKPKRSDLDMNHHVNNVKYVR 288 (302)
Q Consensus 210 ~a~s~wV~vD~~tRRpvriPeel~e~~~~~~~~~~~~~~~~~~ki~~~~~~-~~~~~~~~~Vr~sDLD~NgHVNN~~Yl~ 288 (302)
+|.|+||+||++||||+|||+++++.+.+|..+.....++.++|+++++.. .++....++|||+|||.||||||++|++
T Consensus 247 ~A~SvWV~mD~~TRRpvRIP~Evr~~i~~y~~~~~~~i~~~~~kl~~l~~~~~~~~~~~~~VRysDLD~NgHVNNvkYi~ 326 (419)
T PLN02370 247 RASSVWVMMNKLTRRLSKIPEEVRGEIEPYFLNSDPVVNEDSRKLPKLDDKTADYIRKGLTPRWSDLDVNQHVNNVKYIG 326 (419)
T ss_pred EEEEEEEEEECCCCcccCCCHHHHHhhhhcccccccccccccccCCccccccccceeeeeeecHHHCcccCccccHHHHH
Confidence 999999999999999999999998888888765432222345677776542 1233345899999999999999999999
Q ss_pred HHHhhCCCCe
Q 022145 289 WMLENTEGNV 298 (302)
Q Consensus 289 w~ld~lP~e~ 298 (302)
|++|++|.+|
T Consensus 327 Wild~lP~e~ 336 (419)
T PLN02370 327 WILESAPPPI 336 (419)
T ss_pred HHHhhCchhh
Confidence 9999999876
No 2
>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []. These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.
Probab=100.00 E-value=5.7e-45 Score=335.84 Aligned_cols=194 Identities=36% Similarity=0.619 Sum_probs=135.9
Q ss_pred CceEEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCccc-----ccccCCeEEEEEeeeeeeeccCC
Q 022145 100 GVGYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATH-----GMMRNNLIWVVSRMQVEIDHYPI 174 (302)
Q Consensus 100 ~~~f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~-----~l~~~g~~wVV~r~~i~~~r~p~ 174 (302)
|.+|+++++|+++|||.+|+++++.+++|||++++.|+.. .|+|... .|.+.|++|||+++++++.|+|+
T Consensus 1 g~~y~~~~~v~~~e~d~~~~l~l~~l~~~~qe~a~~h~~~-----lG~~~~~~~~~~~l~~~~~~Wvl~r~~i~i~r~P~ 75 (261)
T PF01643_consen 1 GLVYEKEFTVRYYECDPNGRLKLSALLNYFQEAATEHAES-----LGFGMDYFGSTPELKKQGLAWVLSRYQIEIHRYPR 75 (261)
T ss_dssp ---EEEEEE--GGGB-TTSBB-HHHHHHHHHHHHHHHHHH-----TT-SHHH------HHCTTEEEEEEEEEEEESS--B
T ss_pred CceEEEEEEEcceeeCCCCCCCHHHHHHHHHHHHHHHHHH-----hCCCcccchhhhhHhhcCcEEEEEEEEEEEEecCC
Confidence 5689999999999999999999999999999999999863 4665542 27899999999999999999999
Q ss_pred CCCEEEEEEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEEEEecCCCccccCCHHHHHhhCccccccc-cccccCccc
Q 022145 175 WGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIPAEVRAEISPWFIDKQ-AIIEDVPEK 253 (302)
Q Consensus 175 ~gD~I~I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~tRRpvriPeel~e~~~~~~~~~~-~~~~~~~~k 253 (302)
+||+|+|+||+.+.+++++.|+|.|++.++|+++++|+|.||+||+++|||+|+|+++.+.+.+...+.. ........+
T Consensus 76 ~~e~i~i~Tw~~~~~~~~~~R~f~i~d~~~G~~l~~a~s~WvliD~~trr~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (261)
T PF01643_consen 76 WGEKITIETWPSGFKRFFAYRDFEIYDAEDGELLARATSIWVLIDLETRRPVRIPEEIIEEYGPFFPDELPEEDIRKLPK 155 (261)
T ss_dssp TT-EEEEEEEEEEE-SSEEEEEEEEE--TTS-EEEEEEEEEEEEETTT-SEE---GGCTCCGGGGB----T-EESSS---
T ss_pred CCCEEEEEEEeccCCCcEEEEEEEEEECCCCcEEEEEEEEEEEEEhhhCCcccCCHHHHhhhhhhccccccccccccccc
Confidence 9999999999999999999999999965799999999999999999999999999988776643222211 001111223
Q ss_pred ccCCCccccccccccccCCCCCcccCCCchHHHHHHHHhhCCCCe
Q 022145 254 ISKLDDTAKYVNSDLKPKRSDLDMNHHVNNVKYVRWMLENTEGNV 298 (302)
Q Consensus 254 i~~~~~~~~~~~~~~~Vr~sDLD~NgHVNN~~Yl~w~ld~lP~e~ 298 (302)
+++..........+++|||||||+||||||++|++|++|+||.++
T Consensus 156 ~~~~~~~~~~~~~~~~vr~sDiD~N~HVNN~~Yl~w~~d~lp~~~ 200 (261)
T PF01643_consen 156 IPKNPPEEPEFEKEFTVRYSDIDMNGHVNNARYLDWALDALPEEF 200 (261)
T ss_dssp -------TTSECEEEE--GGGEETTTCE-HHHHHHHHHCCS-HHH
T ss_pred ccccCChhhheeecccccHHHCCCCCCcCHHHHHHHHHHhCcchh
Confidence 322111111224689999999999999999999999999999976
No 3
>COG3884 FatA Acyl-ACP thioesterase [Lipid metabolism]
Probab=99.97 E-value=9.7e-32 Score=238.15 Aligned_cols=183 Identities=24% Similarity=0.367 Sum_probs=150.7
Q ss_pred eEEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCccc--ccccCCeEEEEEeeeeeeeccCCCCCEE
Q 022145 102 GYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATH--GMMRNNLIWVVSRMQVEIDHYPIWGEVV 179 (302)
Q Consensus 102 ~f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~--~l~~~g~~wVV~r~~i~~~r~p~~gD~I 179 (302)
.+.+.+.|.+++.|+.|++..+..+.+..+++..+ ..|+|... .+.+.+..|+|.++.+++.|||.+||.|
T Consensus 3 ~~k~~~~vP~~~~d~~g~i~~~~~l~l~~~i~~~Q-------si~lg~~~~~~lee~~l~WiV~~~~i~~ir~pef~e~i 75 (250)
T COG3884 3 VDKQNMPVPFYWPDAVGDIDITSRLRLDLQIRGIQ-------SIGLGQLDVAGLEEYHLLWIVRRTEIDVIRPPEFGEMI 75 (250)
T ss_pred chhhcCCCccchhhhcCCcchhhhhhhhhhhccee-------ecccchhhhhhHhhcCceEEEEEEEEEEeeccccCCcc
Confidence 45677888899999999999999999999987654 34555222 3678899999999999999999999999
Q ss_pred EEEEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEEEEecCCCccccCCHHHHHhhCccccccccccccCcccccCCCc
Q 022145 180 EIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIPAEVRAEISPWFIDKQAIIEDVPEKISKLDD 259 (302)
Q Consensus 180 ~I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~tRRpvriPeel~e~~~~~~~~~~~~~~~~~~ki~~~~~ 259 (302)
+|+||+.++.++++.|+|.+.+ .|+.+....+.|++||.+||||.++++++.+.|..-...+... .+..+.+..+
T Consensus 76 ti~t~~~s~~~ffcyrrf~~~~--~gg~Lie~~a~wilmn~dTrkp~ri~~d~la~~~~t~~~k~~r---~~~~l~~~~e 150 (250)
T COG3884 76 TIETWCSSISNFFCYRRFRLDG--RGGGLIEIEAFWILMNRDTRKPARITDDLLAPFNLTTEKKRLR---WPKYLSSRLE 150 (250)
T ss_pred eEEEeeccccceEEEEEEEEec--CCCcEEEEEEEEEEEccccccceeccHHHhhhhcccchhheec---cccccCcccc
Confidence 9999999999999999999996 8999999999999999999999999999998775433222111 2222222122
Q ss_pred cccccccccccCCCCCcccCCCchHHHHHHHHhhCCCCe
Q 022145 260 TAKYVNSDLKPKRSDLDMNHHVNNVKYVRWMLENTEGNV 298 (302)
Q Consensus 260 ~~~~~~~~~~Vr~sDLD~NgHVNN~~Yl~w~ld~lP~e~ 298 (302)
.. ...+|.|||+|||+||||||++|++|++|.|+.+|
T Consensus 151 ~s--~~~~f~vR~~DID~f~HvNNskY~~wi~e~l~~~~ 187 (250)
T COG3884 151 AS--EIHDFPVRYTDIDMFGHVNNSKYWSWIEEVLGSEF 187 (250)
T ss_pred cc--ccccceeEEEeeccccccccceehHHHHHHHhhhh
Confidence 11 14589999999999999999999999999999776
No 4
>PRK10800 acyl-CoA thioesterase YbgC; Provisional
Probab=99.96 E-value=1.2e-27 Score=197.46 Aligned_cols=128 Identities=15% Similarity=0.208 Sum_probs=117.1
Q ss_pred eEEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEE
Q 022145 102 GYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEI 181 (302)
Q Consensus 102 ~f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I 181 (302)
+|..+++|||+|||++|||+|++|++|||+|+.+|+.. .|++.. .+.+.|.+|++++++++|++|+++||+|+|
T Consensus 2 ~f~~~~~Vr~~d~D~~Ghv~~~~y~~~~e~a~~~~~~~-----~g~~~~-~~~~~~~~~~v~~~~i~y~~~~~~~d~i~v 75 (130)
T PRK10800 2 LFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRH-----HHFSQQ-ALLAERVAFVVRKMTVEYYAPARLDDMLEV 75 (130)
T ss_pred ceEEEEEEeehhcCCCCeEehHHHHHHHHHHHHHHHHH-----cCCCHH-HHHhCCCEEEEEEEEEEEcCcccCCCEEEE
Confidence 57899999999999999999999999999999999742 366543 456779999999999999999999999999
Q ss_pred EEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEEEEecCCCccccCCHHHHHhh
Q 022145 182 DTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIPAEVRAEI 236 (302)
Q Consensus 182 ~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~tRRpvriPeel~e~~ 236 (302)
+||+.++++.++...|+|++ .+|+++++|.++||++|.+++||+++|+++++.|
T Consensus 76 ~t~v~~~~~~s~~~~~~i~~-~~g~~~a~~~~~~v~~d~~~~r~~~iP~~l~~~~ 129 (130)
T PRK10800 76 QSEITSMRGTSLTFTQRIVN-AEGTLLNEAEVLIVCVDPLKMKPRALPKSIVAEF 129 (130)
T ss_pred EEEEEeeCcEEEEEEEEEEc-CCCeEEEEEEEEEEEEECCCCcCcCCCHHHHHhh
Confidence 99999999999999999997 6899999999999999999999999999998765
No 5
>TIGR02799 thio_ybgC tol-pal system-associated acyl-CoA thioesterase. The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import o
Probab=99.93 E-value=2.4e-25 Score=181.77 Aligned_cols=124 Identities=16% Similarity=0.235 Sum_probs=112.9
Q ss_pred EEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCccccc-ccCCeEEEEEeeeeeeeccCCCCCEEEE
Q 022145 103 YRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGM-MRNNLIWVVSRMQVEIDHYPIWGEVVEI 181 (302)
Q Consensus 103 f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l-~~~g~~wVV~r~~i~~~r~p~~gD~I~I 181 (302)
|+.+++|||+|||++|||+++.|++||++|+..++.. .|++.. ++ .+.|.+|++++++++|++|+++||+|.|
T Consensus 1 f~~~~~vr~~d~D~~Ghv~~~~y~~~~~~a~~~~~~~-----~g~~~~-~~~~~~~~~~vv~~~~i~y~~~~~~gd~v~v 74 (126)
T TIGR02799 1 FRWPIRVYYEDTDAGGVVYHANYLKFMERARTEWLRA-----LGFEQS-ALLEETGLVFVVRSMELDYLKPARLDDLLTV 74 (126)
T ss_pred CcceEEEEEeccCCCceEEechHHHHHHHHHHHHHHH-----cCCCHH-HHhhcCCcEEEEEEEEEEEcCcccCCCEEEE
Confidence 4678999999999999999999999999999999752 366543 45 3569999999999999999999999999
Q ss_pred EEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEEEEecCCCccccCCHHHHH
Q 022145 182 DTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIPAEVRA 234 (302)
Q Consensus 182 ~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~tRRpvriPeel~e 234 (302)
+||+.++++.++.+.|.|++ +|+++|+|.++||++|.+++||+++|+++++
T Consensus 75 ~~~v~~~~~~~~~~~~~i~~--~g~~~a~~~~~~v~vd~~~~~~~~~p~~~~~ 125 (126)
T TIGR02799 75 TTRVVELKGASLVFAQEVRR--GDTLLCEATVEVACVDASDMRPRRLPAELRA 125 (126)
T ss_pred EEEEEecCceEEEEEEEEEe--CCEEEEEEEEEEEEEECCCCcCcCCCHHHhh
Confidence 99999999999999999994 7999999999999999999999999999875
No 6
>COG0824 FcbC Predicted thioesterase [General function prediction only]
Probab=99.93 E-value=5.6e-25 Score=184.52 Aligned_cols=132 Identities=17% Similarity=0.282 Sum_probs=120.2
Q ss_pred CceEEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEE
Q 022145 100 GVGYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVV 179 (302)
Q Consensus 100 ~~~f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I 179 (302)
...|..+++|||+|+|.+|||+|++|+.|||+|+++++.. .|++.. .+.+.|+.|++++++|+|++|.++||.+
T Consensus 3 ~~~~~~~~~V~~~d~D~~GhV~~a~Yl~~fE~ar~~~l~~-----~g~~~~-~~~~~~~~~~v~~~~i~y~~p~~~~d~l 76 (137)
T COG0824 3 SFPFSTPIRVRYEDTDAMGHVNNANYLVFFEEARTEFLRA-----LGFDYA-DLEEGGIAFVVVEAEIDYLRPARLGDVL 76 (137)
T ss_pred CcceEEEEEEEhhhcCcccEEecchHHHHHHHHHHHHHHH-----cCCCHH-HHhhCCcEEEEEEEEeEECCCccCCCEE
Confidence 3578999999999999999999999999999999999752 466654 5667789999999999999999999999
Q ss_pred EEEEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEEEEecCCCccccCCHHHHHhhCcc
Q 022145 180 EIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIPAEVRAEISPW 239 (302)
Q Consensus 180 ~I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~tRRpvriPeel~e~~~~~ 239 (302)
+|+||+.++|+.++...|+|++ + ++++++|.+++|++|.+++||+++|+++++.+..+
T Consensus 77 ~v~~~v~~~~~~s~~~~~~i~~-~-~~l~a~~~~~~V~v~~~~~kp~~~P~~~~~~l~~~ 134 (137)
T COG0824 77 TVRTRVEELGGKSLTLGYEIVN-E-DELLATGETTLVCVDLKTGKPVPLPPELREALEAL 134 (137)
T ss_pred EEEEEEEeecCeEEEEEEEEEe-C-CEEEEEEEEEEEEEECCCCCcccCCHHHHHHHHHh
Confidence 9999999999999999999997 3 49999999999999999999999999999987643
No 7
>TIGR00051 acyl-CoA thioester hydrolase, YbgC/YbaW family. This model describes a subset of related acyl-CoA thioesterases that include several at least partially characterized proteins. YbgC is an acyl-CoA thioesterase associated with the Tol-Pal system. YbaW is part of the FadM regulon.
Probab=99.92 E-value=1.3e-24 Score=174.42 Aligned_cols=117 Identities=16% Similarity=0.163 Sum_probs=105.8
Q ss_pred EEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEEEEEE
Q 022145 106 TVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWV 185 (302)
Q Consensus 106 ~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I~Twv 185 (302)
+++|+|+|||++|||+++.|++|||+|+..|+. ..|++.. .+.+.|++|++++++++|++||++||+|+|+||+
T Consensus 1 ~~~V~~~d~D~~G~v~~~~y~~~~~~a~~~~~~-----~~g~~~~-~~~~~~~~~~v~~~~i~y~~~~~~gd~v~v~~~~ 74 (117)
T TIGR00051 1 PVRVYYEDTDAQGIVYHANYLRYCERARTEFLR-----SLGFPQS-VLRAEGVAFVVVNINIEYKKPARLDDVLEIRTQI 74 (117)
T ss_pred CEEEEEeccCCCcEEEehHHHHHHHHHHHHHHH-----HcCCCHH-HHHhCCCEEEEEEEEEEECCcccCCCEEEEEEEE
Confidence 368999999999999999999999999999975 2355543 5677899999999999999999999999999999
Q ss_pred eeeCCceEEEEEEEEEcCCCcEEEEEEEEEEEEecCCCccccCC
Q 022145 186 GASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIP 229 (302)
Q Consensus 186 ~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~tRRpvriP 229 (302)
..+++.++.+.|+|++ .+|++++.+.+.||++|++++||+++|
T Consensus 75 ~~~~~~s~~~~~~i~~-~~~~~~~~~~~~~v~~d~~~~r~~~ip 117 (117)
T TIGR00051 75 EELNGFSFVFSQEIFN-EDEALLKAATVIVVCVDPKKQKPVAIP 117 (117)
T ss_pred EecCcEEEEEEEEEEe-CCCcEEEeeEEEEEEEECCCCeEcCCC
Confidence 9999999999999997 677888888888999999999999987
No 8
>PF13279 4HBT_2: Thioesterase-like superfamily; PDB: 2W3X_E 3CK1_A 2GF6_C 2NUJ_A 2HLJ_A 2XFL_B 2XEM_B 2OIW_B 2HX5_A 2FUJ_A ....
Probab=99.87 E-value=4.6e-21 Score=155.52 Aligned_cols=119 Identities=21% Similarity=0.291 Sum_probs=97.0
Q ss_pred eeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEEEEEEeee
Q 022145 109 VRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGAS 188 (302)
Q Consensus 109 Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I~Twv~~~ 188 (302)
|||+||| +|||+|+.|++||++|+.+++.. .|+ . ..+...|+++++++.+++|++|.++||+++|++++..+
T Consensus 1 Vr~~D~D-~ghv~n~~Y~~~~e~ar~~~~~~-----~g~-~-~~~~~~~~~~~v~~~~i~y~~~~~~~d~~~v~~~~~~~ 72 (121)
T PF13279_consen 1 VRWSDTD-NGHVNNARYLRYFEEAREEFLEE-----LGL-Y-DELQGQGIGFVVAESEIDYLRPLRFGDRLEVETRVEEI 72 (121)
T ss_dssp --GGGB--TSSB-HHHHHHHHHHHHHHHHHH-----HTS-C-HHHTTTTEEEEEEEEEEEE-S--BTTSEEEEEEEEEEE
T ss_pred CCHHHcc-CCeEcHHHHHHHHHHHHHHHHHh-----cch-h-hHHHhcCceEEEEEEEEEEcccccCCCEEEEEEEEEEE
Confidence 7999999 99999999999999999998742 355 3 25778899999999999999999999999999999999
Q ss_pred CCceEEEEEEEEEcCCCc--EEEEEEEEEEEEecCCCccccCCHHHHHhh
Q 022145 189 GKNGMRRDWLIRSQATGH--IFARATSTWVMMNQQTRRLSKIPAEVRAEI 236 (302)
Q Consensus 189 g~~~~~R~f~I~d~~~Ge--lia~a~s~wV~vD~~tRRpvriPeel~e~~ 236 (302)
++.++...|.|++..+|+ ++|+|.+++|++|.++ |++++|+++++++
T Consensus 73 ~~~s~~~~~~i~~~~~g~~~~~a~~~~~~v~~d~~~-r~~~~P~~~~~~l 121 (121)
T PF13279_consen 73 GGKSFRFEQEIFRPADGKGELAATGRTVMVFVDYKT-RSVPIPDELREAL 121 (121)
T ss_dssp ESSEEEEEEEEEECSTTEEEEEEEEEEEEEEEETTT-CE-B--HHHHHHH
T ss_pred CCcEEEEEEEEEEcCCCceEEEEEEEEEEEEEeCCC-CcCCCCHHHHhcC
Confidence 999999999999733565 4999999999999999 6999999999864
No 9
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=99.86 E-value=5.7e-21 Score=190.90 Aligned_cols=131 Identities=15% Similarity=0.116 Sum_probs=117.9
Q ss_pred eEEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEE
Q 022145 102 GYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEI 181 (302)
Q Consensus 102 ~f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I 181 (302)
.+..+++|+++|||.+|||+|+.|++||++|+.+|+.. .|++. .....|.+|++++++|+|++|+++||.|+|
T Consensus 345 ~~~~~~~V~~~~~D~~Ghvnn~~Yl~~~e~Ar~~~~~~-----~G~~~--~~~~~~~~~vvv~~~i~y~rp~~~gD~v~I 417 (495)
T PRK07531 345 LRLVETKVPPAWVDYNGHMTEHRYLQVFGDTTDALLRL-----IGVDA--AYVAAGHSYYTVETHIRHLGEAKAGQALHV 417 (495)
T ss_pred eEEEeEEECHHHcCCCCeEcHHHHHHHHHHHHHHHHHH-----cCCCH--HHHhcCCcEEEEEEEEEEcccCCCCCEEEE
Confidence 45779999999999999999999999999999999752 36554 234458999999999999999999999999
Q ss_pred EEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEEEEecCCCccccCCHHHHHhhCccc
Q 022145 182 DTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIPAEVRAEISPWF 240 (302)
Q Consensus 182 ~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~tRRpvriPeel~e~~~~~~ 240 (302)
+||+..+++.++.+.|+|++ .+|+++++|.++||++|+++|||+++|+++++.+..+.
T Consensus 418 ~t~v~~~~~~s~~~~~~i~~-~~g~l~A~g~~~~v~vD~~trr~~~iP~e~r~~l~~~~ 475 (495)
T PRK07531 418 ETQLLSGDEKRLHLFHTLYD-AGGELIATAEHMLLHVDLKAGKAVPAPAAVLAALKPIA 475 (495)
T ss_pred EEEEEecCCcEEEEEEEEEC-CCCcEEEEEEEEEEEEECCCCccCCCCHHHHHHHHHHH
Confidence 99999999999999999997 78999999999999999999999999999998876543
No 10
>cd00586 4HBT 4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).
Probab=99.75 E-value=3.5e-17 Score=127.38 Aligned_cols=110 Identities=17% Similarity=0.222 Sum_probs=98.4
Q ss_pred EEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEEE
Q 022145 103 YRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEID 182 (302)
Q Consensus 103 f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I~ 182 (302)
|+.++.|+++|+|.+||++++.|++|+++++..++.. .|++.. .+...+.+|++.+.+++|.+|+.+||+|+++
T Consensus 1 ~~~~~~v~~~d~d~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~i~v~ 74 (110)
T cd00586 1 FTLEIRVRFGDTDAAGHVNNARYLRYFEEAREEFLRE-----LGLGYD-ELEEQGLGLVVVELEIDYLRPLRLGDRLTVE 74 (110)
T ss_pred CcEEEEEEEhhcCCCCEEchhHHHHHHHHHHHHHHHH-----cCCCHH-HHHhCCceEEEEEeEeeEcCccCCCCEEEEE
Confidence 4678999999999999999999999999999998752 344332 3467799999999999999999999999999
Q ss_pred EEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEEEEe
Q 022145 183 TWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMN 219 (302)
Q Consensus 183 Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV~vD 219 (302)
+|+.+.++.++.+.+.+++ ++|+++|+|.+.|+++|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~-~~g~~~a~~~~~~~~~d 110 (110)
T cd00586 75 TRVLRLGRKSFTFEQEIFR-EDGELLATAETVLVCVD 110 (110)
T ss_pred EEEEecCcEEEEEEEEEEC-CCCeEEEEEEEEEEEeC
Confidence 9999999999999999997 47999999999999987
No 11
>cd03442 BFIT_BACH Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, and brown adipose tissues. The archeal and eukaryotic members of this family have two tandem copies of the conserved hot dog fold, while most bacterial members have only one copy.
Probab=99.42 E-value=1e-11 Score=99.95 Aligned_cols=113 Identities=15% Similarity=0.158 Sum_probs=93.6
Q ss_pred ceEEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEee-eeeeeccCCCCCEE
Q 022145 101 VGYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRM-QVEIDHYPIWGEVV 179 (302)
Q Consensus 101 ~~f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~-~i~~~r~p~~gD~I 179 (302)
-.+...+.|++.++|+.|+++.+.|+.++++++..++. . .... .+++... +++|.+|..+||.|
T Consensus 6 ~~~~~~~~v~~~~~d~~g~v~~g~~~~~~d~a~~~~~~-------~------~~~~--~~~~~~~~~~~f~~p~~~gd~l 70 (123)
T cd03442 6 TELSTRELVLPEDTNHHGTIFGGWLLEWMDELAGIAAY-------R------HAGG--RVVTASVDRIDFLKPVRVGDVV 70 (123)
T ss_pred cceEEEEEeCCcccCcCCcEeHHHHHHHHHHHHHHHHH-------H------HhCC--cEEEEEECceEEcCccccCcEE
Confidence 36789999999999999999999999999999866532 0 1111 2333344 79999999999999
Q ss_pred EEEEEEeeeCCceEEEEEEEEEcC----CCcEEEEEEEEEEEEecCCCccccCC
Q 022145 180 EIDTWVGASGKNGMRRDWLIRSQA----TGHIFARATSTWVMMNQQTRRLSKIP 229 (302)
Q Consensus 180 ~I~Twv~~~g~~~~~R~f~I~d~~----~Gelia~a~s~wV~vD~~tRRpvriP 229 (302)
.+++++.+.++.++..++++++.+ +++++++|..++|++| .++||.++|
T Consensus 71 ~i~~~v~~~g~~~~~~~~~i~~~~~~~~~~~~~a~~~~~~v~~~-~~~~~~~~p 123 (123)
T cd03442 71 ELSARVVYTGRTSMEVGVEVEAEDPLTGERRLVTSAYFTFVALD-EDGKPRPVP 123 (123)
T ss_pred EEEEEEEEecCCeEEEEEEEEEecCCCCcEEEEEEEEEEEEEEC-CCCCeeeCC
Confidence 999999999999999999999732 2479999999999999 568998887
No 12
>cd03440 hot_dog The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis.
Probab=99.03 E-value=1e-08 Score=74.67 Aligned_cols=98 Identities=18% Similarity=0.161 Sum_probs=85.8
Q ss_pred EEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEEEE
Q 022145 104 RQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDT 183 (302)
Q Consensus 104 ~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I~T 183 (302)
...++|+++|+|.+++++...++.++++++..++.. .+ . .+..+++.+.+++|.+|+..||.|.+++
T Consensus 2 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~----~--~~~~~~~~~~~~~~~~~~~~g~~v~~~~ 68 (100)
T cd03440 2 VLRLTVTPEDIDGGGIVHGGLLLALADEAAGAAAAR-------LG----G--RGLGAVTLSLDVRFLRPVRPGDTLTVEA 68 (100)
T ss_pred EEEEEeCHHHcCcCCccchHHHHHHHHHHHHHHHHH-------hc----c--CCCeEEEEEEEeEEecCCCCCCEEEEEE
Confidence 457899999999999999999999999999888631 10 1 5679999999999999999999999999
Q ss_pred EEeeeCCceEEEEEEEEEcCCCcEEEEEEEEE
Q 022145 184 WVGASGKNGMRRDWLIRSQATGHIFARATSTW 215 (302)
Q Consensus 184 wv~~~g~~~~~R~f~I~d~~~Gelia~a~s~w 215 (302)
++...++.++.....+.+ ++|++++.+...+
T Consensus 69 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 99 (100)
T cd03440 69 EVVRVGRSSVTVEVEVRN-EDGKLVATATATF 99 (100)
T ss_pred EEEeccccEEEEEEEEEC-CCCCEEEEEEEEe
Confidence 999999988888888886 5799999997765
No 13
>PF03061 4HBT: Thioesterase superfamily; InterPro: IPR006683 This family contains a wide variety of enzymes, principally thioesterases. This family includes 4HBT (3.1.2.23 from EC) which catalyses the final step in the biosynthesis of 4-hydroxybenzoate from 4-chlorobenzoate in the soil dwelling microbe Pseudomonas CBS-3. This family includes various cytosolic long-chain acyl-CoA thioester hydrolases. Long-chain acyl-CoA hydrolases hydrolyse palmitoyl-CoA to CoA and palmitate, they also catalyse the hydrolysis of other long chain fatty acyl-CoA thioesters. ; PDB: 3F5O_F 2F0X_D 2H4U_C 2PRX_A 2OV9_D 1YLI_B 3BJK_F 1IXL_A 3DKZ_B 2EIS_B ....
Probab=98.95 E-value=2.2e-08 Score=74.27 Aligned_cols=79 Identities=16% Similarity=0.198 Sum_probs=68.4
Q ss_pred CCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEEEEEEeeeCCceEEEE
Q 022145 117 DKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRD 196 (302)
Q Consensus 117 ~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I~Twv~~~g~~~~~R~ 196 (302)
+|+++.+.|+.|+++|+..++.. .+ ..+...++...+++|.+|.+.||.|++++|+.+.|+.++..+
T Consensus 1 ~G~v~~g~~~~~~d~a~~~~~~~-----~~--------~~~~~~~~~~~~i~f~~p~~~gd~l~~~~~v~~~g~~~~~~~ 67 (79)
T PF03061_consen 1 NGIVHGGVYLSLFDEAASAALRS-----HG--------GDGRGVVTVELSIDFLRPVRPGDTLRVEARVVRVGRKSFTVE 67 (79)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHH-----HH--------SSTEEEEEEEEEEEESS-BBTTSEEEEEEEEEEEESSEEEEE
T ss_pred CCEEhHHHHHHHHHHHHHHHHHH-----hc--------cCCcceEEEEEEEEEccccCCCeEEEEEEEEEEECCEEEEEE
Confidence 59999999999999999887642 11 116799999999999999999999999999999999999999
Q ss_pred EEEEEcCCCcEEE
Q 022145 197 WLIRSQATGHIFA 209 (302)
Q Consensus 197 f~I~d~~~Gelia 209 (302)
+++++ ++++++|
T Consensus 68 ~~v~~-~~~~~~~ 79 (79)
T PF03061_consen 68 VEVYS-EDGRLCA 79 (79)
T ss_dssp EEEEE-TTSCEEE
T ss_pred EEEEE-CCCcEEC
Confidence 99998 7887775
No 14
>cd03443 PaaI_thioesterase PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).
Probab=98.78 E-value=3.1e-07 Score=72.63 Aligned_cols=101 Identities=13% Similarity=0.034 Sum_probs=86.7
Q ss_pred ceEEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEE
Q 022145 101 VGYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVE 180 (302)
Q Consensus 101 ~~f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~ 180 (302)
...+..+++...++|..|.++...++.+++.++...+.. ....+...++.+++++|.+|+.. +.|.
T Consensus 12 ~~~~~~~~~~~~~~n~~g~vhgg~l~~l~d~a~~~~~~~-------------~~~~~~~~~~~~~~i~f~~p~~~-~~v~ 77 (113)
T cd03443 12 GRVVLRLPVRPRHLNPGGIVHGGAIATLADTAGGLAALS-------------ALPPGALAVTVDLNVNYLRPARG-GDLT 77 (113)
T ss_pred CeEEEEeeCcHhhcCCCCeEeHHHHHHHHHHHHHHHHhh-------------ccCCCCceEEEEEEEeEEcCCCC-CeEE
Confidence 367888999999999999999999999999988765421 11135677888999999999999 9999
Q ss_pred EEEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEE
Q 022145 181 IDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (302)
Q Consensus 181 I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (302)
+++++.+.++..+..+..+++ ++|+++++|+..|+
T Consensus 78 ~~~~v~~~g~~~~~~~~~~~~-~~~~~~a~a~~~~~ 112 (113)
T cd03443 78 ARARVVKLGRRLAVVEVEVTD-EDGKLVATARGTFA 112 (113)
T ss_pred EEEEEEecCceEEEEEEEEEC-CCCCEEEEEEEEEe
Confidence 999999999999988999996 56999999999886
No 15
>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []. These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.
Probab=98.77 E-value=5.1e-08 Score=90.06 Aligned_cols=97 Identities=14% Similarity=0.259 Sum_probs=69.4
Q ss_pred CCceEEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCE
Q 022145 99 GGVGYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEV 178 (302)
Q Consensus 99 ~~~~f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~ 178 (302)
....+..+++||++|+|.+|||||..|++|+.++--.. +.+ .-.+.++.|.|.++..+||+
T Consensus 162 ~~~~~~~~~~vr~sDiD~N~HVNN~~Yl~w~~d~lp~~----------------~~~---~~~~~~i~I~y~~E~~~gd~ 222 (261)
T PF01643_consen 162 EEPEFEKEFTVRYSDIDMNGHVNNARYLDWALDALPEE----------------FLE---KYQIKSIDINYKKEIRYGDT 222 (261)
T ss_dssp -TTSECEEEE--GGGEETTTCE-HHHHHHHHHCCS-HH----------------HHC---CEEEEEEEEEE-S--BTT-E
T ss_pred hhhheeecccccHHHCCCCCCcCHHHHHHHHHHhCcch----------------hhc---cCCcEEEEEEEccccCCCCE
Confidence 45678899999999999999999999999999853221 111 23477899999999999999
Q ss_pred EEEEEEEeeeC-CceEEEEEEEEEcCCCcEEEEEEEEE
Q 022145 179 VEIDTWVGASG-KNGMRRDWLIRSQATGHIFARATSTW 215 (302)
Q Consensus 179 I~I~Twv~~~g-~~~~~R~f~I~d~~~Gelia~a~s~w 215 (302)
|.+.+.+.... .......+.|.+ ++|+.+|++.+.|
T Consensus 223 i~~~~~~~~~~~~~~~~~~h~i~~-~~g~~~~~~~~~W 259 (261)
T PF01643_consen 223 ITSYTEVEKDEEEDGLSTLHEIRN-EDGEEVARARTEW 259 (261)
T ss_dssp EEEEEEEEEECCTTEEEEEEEEEC-T-TCEEEEEEEEE
T ss_pred EEEEEEEcccccCCceEEEEEEEc-CCCceEEEEEEEE
Confidence 99999875433 344556688886 5599999999999
No 16
>PLN02370 acyl-ACP thioesterase
Probab=98.49 E-value=5.7e-07 Score=88.26 Aligned_cols=96 Identities=17% Similarity=0.195 Sum_probs=68.9
Q ss_pred EEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEEE
Q 022145 103 YRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEID 182 (302)
Q Consensus 103 f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I~ 182 (302)
.+..++|||+|+|.||||||..|++|+.|+.-. ++.+ ...+.++.|+|+++..+||.|...
T Consensus 302 ~~~~~~VRysDLD~NgHVNNvkYi~Wild~lP~----------------e~l~---~~~l~~i~I~Y~kE~~~gd~V~s~ 362 (419)
T PLN02370 302 IRKGLTPRWSDLDVNQHVNNVKYIGWILESAPP----------------PIME---SHELAAITLEYRRECGRDSVLQSL 362 (419)
T ss_pred eeeeeeecHHHCcccCccccHHHHHHHHhhCch----------------hhhh---cceEEEEEEEEcccCCCCCEEEEE
Confidence 345599999999999999999999999995321 1111 124678999999999999999988
Q ss_pred EEEee--eCC---ce-EEEEEEEEEcCCCcEEEEEEEEEEEE
Q 022145 183 TWVGA--SGK---NG-MRRDWLIRSQATGHIFARATSTWVMM 218 (302)
Q Consensus 183 Twv~~--~g~---~~-~~R~f~I~d~~~Gelia~a~s~wV~v 218 (302)
+.... .+. .. ......+. .++|++++++.+.|---
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~h~~~-~~dG~e~a~a~t~Wr~~ 403 (419)
T PLN02370 363 TAVSGTGIGNLGTAGDVECQHLLR-LEDGAEIVRGRTEWRPK 403 (419)
T ss_pred EeecccccccccCCCcceEEEEEE-cCCCeEEEEEEEEEEEC
Confidence 77531 111 11 11223344 37899999999999643
No 17
>PRK10694 acyl-CoA esterase; Provisional
Probab=98.47 E-value=6.4e-06 Score=68.85 Aligned_cols=112 Identities=10% Similarity=0.009 Sum_probs=88.1
Q ss_pred EEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEee-eeeeeccCCCCCEEEE
Q 022145 103 YRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRM-QVEIDHYPIWGEVVEI 181 (302)
Q Consensus 103 f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~-~i~~~r~p~~gD~I~I 181 (302)
....+.|...|++..|.++-..+|.|+++++.-.+. .-.+..++.+.. .++|.+|.+.||.|++
T Consensus 12 ~~~~~~v~p~~~N~~g~lfGG~ll~~~D~~a~i~a~---------------~~~~~~~vtv~vd~i~F~~Pv~~Gd~l~~ 76 (133)
T PRK10694 12 LVLRTLAMPADTNANGDIFGGWLMSQMDIGGAILAK---------------EIAHGRVVTVRVEGMTFLRPVAVGDVVCC 76 (133)
T ss_pred eEEEEEcChhhcCCCCcEeHHHHHHHHHHHHHHHHH---------------HHcCCceEEEEECceEECCCcccCcEEEE
Confidence 456678999999999999999999999998755431 111234667777 6799999999999999
Q ss_pred EEEEeeeCCceEEEEEEEEEc-----CCC--cEEEEEEEEEEEEecCCCccccCCH
Q 022145 182 DTWVGASGKNGMRRDWLIRSQ-----ATG--HIFARATSTWVMMNQQTRRLSKIPA 230 (302)
Q Consensus 182 ~Twv~~~g~~~~~R~f~I~d~-----~~G--elia~a~s~wV~vD~~tRRpvriPe 230 (302)
++++...|+.++....+++.. ..| ..++.+..++|.+| +.+||.++|+
T Consensus 77 ~a~V~~~g~sS~~v~v~v~~~~~~~~~~g~~~~~~~~~~tfVavd-~~g~p~~vp~ 131 (133)
T PRK10694 77 YARCVKTGTTSISINIEVWVKKVASEPIGQRYKATEALFTYVAVD-PEGKPRALPV 131 (133)
T ss_pred EEEEEEccCceEEEEEEEEEeecccCCCCcEEEEEEEEEEEEEEC-CCCCEEeCCC
Confidence 999999999999877777731 113 24678888888898 5689998885
No 18
>COG1607 Acyl-CoA hydrolase [Lipid metabolism]
Probab=98.11 E-value=0.00013 Score=62.55 Aligned_cols=114 Identities=15% Similarity=0.130 Sum_probs=87.8
Q ss_pred EEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEEEE
Q 022145 104 RQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDT 183 (302)
Q Consensus 104 ~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I~T 183 (302)
.....+-+.|++++|.++=..+|.|+.+++.--+. .. ..|..--+.=-++.|.+|.+.||.|.+.+
T Consensus 15 ~~~~lv~P~dtN~~g~ifGG~lm~~mD~~a~i~A~-------------~~-a~~~vVTasvd~v~F~~Pv~vGd~v~~~a 80 (157)
T COG1607 15 VLRTLVMPSDTNPNGTIFGGWLLSWMDLAAAIAAS-------------RH-AGGRVVTASVDSVDFKKPVRVGDIVCLYA 80 (157)
T ss_pred EEEEEecCCccCcccccccHHHHHHHHHHHHHHHH-------------HH-hCCeEEEEEeceEEEccccccCcEEEEEE
Confidence 47788999999999999999999999998765431 01 11211122224789999999999999999
Q ss_pred EEeeeCCceEEEEEEEEEc----CCCcEEEEEEEEEEEEecCCCccccCCHHH
Q 022145 184 WVGASGKNGMRRDWLIRSQ----ATGHIFARATSTWVMMNQQTRRLSKIPAEV 232 (302)
Q Consensus 184 wv~~~g~~~~~R~f~I~d~----~~Gelia~a~s~wV~vD~~tRRpvriPeel 232 (302)
|+...|+.|+...-+++.+ ...+..+.+..++|-+|-+ +||.++|++.
T Consensus 81 ~v~~~GrTSm~V~Vev~~~~~~~~~~~~~t~~~ft~VAvd~~-gkP~~vp~~~ 132 (157)
T COG1607 81 RVVYTGRTSMEVGVEVWAEDIRSGERRLATSAYFTFVAVDED-GKPTPVPREE 132 (157)
T ss_pred EEeecCcccEEEEEEEEEecccCCcceEeeeEEEEEEEECCC-CCcccCCccC
Confidence 9999999999877777641 2234567888889999966 9999999854
No 19
>COG3884 FatA Acyl-ACP thioesterase [Lipid metabolism]
Probab=97.88 E-value=5.7e-05 Score=68.15 Aligned_cols=88 Identities=13% Similarity=-0.040 Sum_probs=67.8
Q ss_pred eEEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEE
Q 022145 102 GYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEI 181 (302)
Q Consensus 102 ~f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I 181 (302)
.+...+.||++|+|.+|||||+.|++|+.|.-..++. ... --.++.++|.+|...||+|+|
T Consensus 152 s~~~~f~vR~~DID~f~HvNNskY~~wi~e~l~~~~~---------------~~~----~p~r~~l~y~keva~G~~iti 212 (250)
T COG3884 152 SEIHDFPVRYTDIDMFGHVNNSKYWSWIEEVLGSEFL---------------KLY----GPLRLTLEYVKEVAPGEKITI 212 (250)
T ss_pred cccccceeEEEeeccccccccceehHHHHHHHhhhhH---------------hhc----ccceeEEEEEcccCCCCeEEE
Confidence 5678999999999999999999999999997654431 001 124788999999999999999
Q ss_pred EEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEE
Q 022145 182 DTWVGASGKNGMRRDWLIRSQATGHIFARATSTW 215 (302)
Q Consensus 182 ~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~w 215 (302)
.+...+.+..- .|. .||.+.+.+..+|
T Consensus 213 ~~e~~~~~s~~-----~f~--~d~~v~~lt~i~~ 239 (250)
T COG3884 213 VYEVHPLESKH-----QFT--SDGQVNALTYIVG 239 (250)
T ss_pred EEEEcccCcee-----eec--CCcceEEEEEEEe
Confidence 99987765442 122 4788877777666
No 20
>TIGR00369 unchar_dom_1 uncharacterized domain 1. Most proteins containing this domain consist almost entirely of a single copy of this domain. A protein from C. elegans consists of two tandem copies of the domain. The domain is also found as the N-terminal region of an apparent initiation factor eIF-2B alpha subunit of Aquifex aeolicus. The function of the domain is unknown.
Probab=97.84 E-value=0.0006 Score=54.89 Aligned_cols=99 Identities=13% Similarity=-0.042 Sum_probs=80.2
Q ss_pred EEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEEE
Q 022145 103 YRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEID 182 (302)
Q Consensus 103 f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I~ 182 (302)
-+..+.+....++..|.++=..++.+++.+...... .....+...+-++.+++|.+|++-| .|+++
T Consensus 18 ~~~~~~v~~~~~n~~g~vhGG~l~~l~D~a~~~a~~-------------~~~~~~~~~vt~~l~i~f~~p~~~g-~l~a~ 83 (117)
T TIGR00369 18 LEATMPVDERTLQPFGSLHGGVSAALADTAGSAAGY-------------LCNSGGQAVVGLELNANHLRPAREG-KVRAI 83 (117)
T ss_pred EEEEEEcCHHHcCCcccChHHHHHHHHHHHHHHHHH-------------hhcCCCceEEEEEEEeeeccccCCC-EEEEE
Confidence 467788888899999999999999999877632211 0112344567778999999999999 99999
Q ss_pred EEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEE
Q 022145 183 TWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (302)
Q Consensus 183 Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (302)
.++.+.|+....-+-+|++ ++|+++|+++.++.
T Consensus 84 a~v~~~gr~~~~~~~~i~~-~~g~~va~~~~t~~ 116 (117)
T TIGR00369 84 AQVVHLGRQTGVAEIEIVD-EQGRLCALSRGTTA 116 (117)
T ss_pred EEEEecCceEEEEEEEEEC-CCCCEEEEEEEEEc
Confidence 9999999988888889997 68999999998763
No 21
>TIGR02286 PaaD phenylacetic acid degradation protein PaaD. Sequences scoring between trusted and noise include those from archaea and other species not known to catabolize phenylacetic acid and which are not adjacent to other genes potentially involved with such a pathway.
Probab=97.70 E-value=0.0017 Score=52.11 Aligned_cols=98 Identities=15% Similarity=0.026 Sum_probs=78.9
Q ss_pred EEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEEE
Q 022145 103 YRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEID 182 (302)
Q Consensus 103 f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I~ 182 (302)
-...+.++...+++.|.++=..++.+++.+....+. . .+..-+....+++|.+|.+.||.|.++
T Consensus 16 ~~~~l~~~~~~~n~~g~~HGG~i~al~D~~~~~~~~-----------~-----~~~~~~t~~~~i~f~rp~~~G~~l~~~ 79 (114)
T TIGR02286 16 ARVAMTVRADMLNGHGTAHGGFLFSLADSAFAYACN-----------S-----YGDAAVAAQCTIDFLRPGRAGERLEAE 79 (114)
T ss_pred EEEEEECCHHHcCcCCCchHHHHHHHHHHHHHHHhc-----------C-----CCCceEEEEEEEEEecCCCCCCEEEEE
Confidence 355788888999999999999999999987543210 0 011124567899999999999999999
Q ss_pred EEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEEE
Q 022145 183 TWVGASGKNGMRRDWLIRSQATGHIFARATSTWVM 217 (302)
Q Consensus 183 Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV~ 217 (302)
.++.+.|+.....+-+|++ ++|+++|.++.+|-.
T Consensus 80 a~v~~~g~~~~~~~~~i~~-~~~~~va~~~~t~~~ 113 (114)
T TIGR02286 80 AVEVSRGGRTGTYDVEVVN-QEGELVALFRGTSRR 113 (114)
T ss_pred EEEEEeCCcEEEEEEEEEc-CCCCEEEEEEEEEEE
Confidence 9999998887777788997 789999999998854
No 22
>PLN02647 acyl-CoA thioesterase
Probab=97.47 E-value=0.0021 Score=63.82 Aligned_cols=116 Identities=12% Similarity=0.062 Sum_probs=84.6
Q ss_pred EeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEe-eeeeeeccCCCCCEEEEEEEEe
Q 022145 108 VVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSR-MQVEIDHYPIWGEVVEIDTWVG 186 (302)
Q Consensus 108 ~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r-~~i~~~r~p~~gD~I~I~Twv~ 186 (302)
.++..+.+..|.+.-..+|.+++++|..-+.. ...+- +.....+..|-+. -+++|.+|++.||.|.|...+.
T Consensus 99 ~l~~~y~N~~G~l~gG~LLe~mD~~A~~~A~r---h~~~~----~~~~~p~~vVTAsVD~i~F~~Pi~~g~~v~l~g~Vt 171 (437)
T PLN02647 99 ILREQYRNPWNEVRIGKLLEDLDALAGTISVK---HCSDD----DSTTRPLLLVTASVDKIVLKKPIRVDVDLKIVGAVT 171 (437)
T ss_pred hhchhhcCCCCcEeHhHHHHHHHHHHHHHHHH---HhCCC----cccCCcceEEEEEECcEEEcCCCcCCcEEEEEEEEE
Confidence 56777799999999999999999987654321 00010 1111122233333 4789999999999999999999
Q ss_pred eeCCceEEEEEEEEEcC------CCcEEEEEEEEEEEEecCCCccccCCH
Q 022145 187 ASGKNGMRRDWLIRSQA------TGHIFARATSTWVMMNQQTRRLSKIPA 230 (302)
Q Consensus 187 ~~g~~~~~R~f~I~d~~------~Gelia~a~s~wV~vD~~tRRpvriPe 230 (302)
..|+.++...-.++... ...++++|..++|.+|.+++||+++|+
T Consensus 172 ~vGrSSMEV~v~V~~~~~~~~~~~~~~~~~a~FtfVA~D~~~gkp~pVp~ 221 (437)
T PLN02647 172 WVGRSSMEIQLEVIQPTKDESNTSDSVALTANFTFVARDSKTGKSAPVNR 221 (437)
T ss_pred EecCCeEEEEEEEEEccccCCCCcEEEEEEEEEEEEEEcCCCCCeeeCCC
Confidence 99999998766666421 123688999999999987899988865
No 23
>PRK10293 acyl-CoA esterase; Provisional
Probab=97.40 E-value=0.008 Score=50.33 Aligned_cols=102 Identities=12% Similarity=-0.086 Sum_probs=82.7
Q ss_pred eEEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEE
Q 022145 102 GYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEI 181 (302)
Q Consensus 102 ~f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I 181 (302)
.-+.++.|+...+.+.|.++=..++.+++.++..... .....+...+-++.+++|.+|.+-| .|+.
T Consensus 35 ~~~~~~~v~~~~~n~~G~lHGGv~~tLaD~a~~~a~~-------------~~~~~~~~~vTiel~infl~p~~~g-~l~a 100 (136)
T PRK10293 35 TLEATMPVDSRTKQPFGLLHGGASVVLAESIGSVAGY-------------LCTEGEQKVVGLEINANHVRSAREG-RVRG 100 (136)
T ss_pred EEEEEEEcCHHHcCCcCcccHHHHHHHHHHHHHHHHH-------------hcccCCceEEEEEEEeEEecccCCc-eEEE
Confidence 4567788888889999999999999999776433211 0112355678889999999999877 6999
Q ss_pred EEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEEEE
Q 022145 182 DTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMM 218 (302)
Q Consensus 182 ~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV~v 218 (302)
+.++.+.|+.....+-+++| ++|+++|.++.+|.++
T Consensus 101 ~a~vv~~Gr~~~~~~~~v~d-~~g~l~A~~~~t~~i~ 136 (136)
T PRK10293 101 VCKPLHLGSRHQVWQIEIFD-EKGRLCCSSRLTTAIL 136 (136)
T ss_pred EEEEEecCCCEEEEEEEEEe-CCCCEEEEEEEEEEEC
Confidence 99999999998888899997 7999999999998763
No 24
>PRK10254 thioesterase; Provisional
Probab=97.24 E-value=0.023 Score=47.72 Aligned_cols=102 Identities=10% Similarity=-0.054 Sum_probs=83.2
Q ss_pred eEEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEE
Q 022145 102 GYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEI 181 (302)
Q Consensus 102 ~f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I 181 (302)
.-+.++.|+...+.+.|.++=..++.+++.++...+. .....|...+-++.+++|.+|.+-| .|+.
T Consensus 35 ~~~~~l~v~~~~~n~~G~vHGGv~~tLaD~a~g~A~~-------------~~~~~g~~~vTiel~in~Lrp~~~g-~l~a 100 (137)
T PRK10254 35 VLEAEMPVDTRTHQPFGLLHGGASAALAETLGSMAGF-------------LMTRDGQCVVGTELNATHHRPVSEG-KVRG 100 (137)
T ss_pred EEEEEEEcCccccCCCCcchHHHHHHHHHHHHHHHHH-------------hhCCCCCeEEEEEEEeEEeccCcCC-eEEE
Confidence 3466777888889999999999999999877543321 1123466789999999999999866 7999
Q ss_pred EEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEEEE
Q 022145 182 DTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMM 218 (302)
Q Consensus 182 ~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV~v 218 (302)
+..+.+.|+.....+-+|++ ++|+++|.++.+..++
T Consensus 101 ~a~vi~~Gr~~~v~~~~v~d-~~g~l~a~~~~t~~i~ 136 (137)
T PRK10254 101 VCQPLHLGRQNQSWEIVVFD-EQGRRCCTCRLGTAVL 136 (137)
T ss_pred EEEEEecCcCEEEEEEEEEc-CCCCEEEEEEEEEEEe
Confidence 99999999998888899997 7999999999877654
No 25
>PRK11688 hypothetical protein; Provisional
Probab=97.19 E-value=0.012 Score=50.05 Aligned_cols=111 Identities=12% Similarity=0.038 Sum_probs=78.0
Q ss_pred EEEEEEeeeCCCC--CCCCcCHHHHHHHHHHHHHHhHHhhccccCCC-Cccc-ccccCCeEEEEEeeeeeeeccCCCCCE
Q 022145 103 YRQTVVVRSYEVG--PDKTATLESILNLFQETALNHVWMSGLLSNGF-GATH-GMMRNNLIWVVSRMQVEIDHYPIWGEV 178 (302)
Q Consensus 103 f~~~~~Vr~~D~D--~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~-g~~~-~l~~~g~~wVV~r~~i~~~r~p~~gD~ 178 (302)
-...+.++...++ +.|.++=..++.+++.+....+... .. .+. +... ...+.....+-++++++|.+|.+ |+.
T Consensus 39 ~~~~l~~~~~~~~n~~~G~vHGG~i~tl~D~a~g~a~~~~-~~-~~~~~~~~~~~~~~~~~~vTi~l~i~fl~p~~-g~~ 115 (154)
T PRK11688 39 VELSFKMQPELVGNIAQSILHGGVIASVLDVAGGLVCVGG-IL-ARHEDISEEELRQRLSRLGTIDLRVDYLRPGR-GER 115 (154)
T ss_pred EEEEeeCCHHHcCCCCcCeeeHHHHHHHHHHHHHHHHHhh-cc-cccccccccccccccccceEEEEEEEeeccCC-CCe
Confidence 4556677777785 5799999999999987765443210 00 000 0000 00111223456799999999996 999
Q ss_pred EEEEEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEEE
Q 022145 179 VEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVM 217 (302)
Q Consensus 179 I~I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV~ 217 (302)
|+++.++.+.|+..+..+-+|++ ++|+++|+++.+|..
T Consensus 116 l~a~a~v~~~g~r~~~~~~~i~~-~~g~lvA~a~~t~~v 153 (154)
T PRK11688 116 FTATSSVLRAGNKVAVARMELHN-EQGVHIASGTATYLV 153 (154)
T ss_pred EEEEEEEEEccCCEEEEEEEEEC-CCCCEEEEEEEEEEe
Confidence 99999999999887777788997 689999999998863
No 26
>COG5496 Predicted thioesterase [General function prediction only]
Probab=97.09 E-value=0.029 Score=46.36 Aligned_cols=110 Identities=13% Similarity=0.129 Sum_probs=85.8
Q ss_pred cCCceEEEEEEeeeCCCCCC-------CCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeee
Q 022145 98 EGGVGYRQTVVVRSYEVGPD-------KTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEID 170 (302)
Q Consensus 98 e~~~~f~~~~~Vr~~D~D~~-------G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~ 170 (302)
.+|..++.++.|+..++++- ..+--+.++.||++|+.+.+. ...++|.+-|-++..++-.
T Consensus 2 ~~g~~~e~~~lv~dn~t~~~~~~~~~~~VlATp~mi~~~E~a~~el~~-------------~~Ld~g~ttVG~ev~vrHl 68 (130)
T COG5496 2 MDGLTLEGEFLVRDNHTVPPAEGSGMLNVLATPAMIGFMENASYELLQ-------------PYLDNGETTVGTEVLVRHL 68 (130)
T ss_pred CCceeeEEEEEecccccCchhHhCCccceeehHHHHHHHHHHHHHHHH-------------hhCcCCcceeeEEEEeeec
Confidence 36778999999999998832 234456778899988876542 2345688999999999999
Q ss_pred ccCCCCCEEEEEEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEEEEecCC
Q 022145 171 HYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQQT 222 (302)
Q Consensus 171 r~p~~gD~I~I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~t 222 (302)
.+.--|.+|+|.+.+.++.+.....+-+.. ++|+.+.+|+-+-+.+|.++
T Consensus 69 a~~~~G~~V~i~~~l~~v~Gr~v~f~i~a~--~~~~~Ig~g~h~R~iv~~~k 118 (130)
T COG5496 69 AATPPGLTVTIGARLEKVEGRKVKFRIIAM--EGGDKIGEGTHTRVIVPREK 118 (130)
T ss_pred cCCCCCCeEEEEEEEEEEeccEEEEEEEEe--eCCcEEeeeEEEEEEecHHH
Confidence 999999999999999998776655433333 68999999999988887553
No 27
>cd00586 4HBT 4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).
Probab=97.02 E-value=0.00021 Score=54.86 Aligned_cols=29 Identities=34% Similarity=0.641 Sum_probs=26.6
Q ss_pred ccccCCCCCcccCCCchHHHHHHHHhhCC
Q 022145 267 DLKPKRSDLDMNHHVNNVKYVRWMLENTE 295 (302)
Q Consensus 267 ~~~Vr~sDLD~NgHVNN~~Yl~w~ld~lP 295 (302)
.+.|+++|+|.||||||..|++|+.++..
T Consensus 4 ~~~v~~~d~d~~g~~~~~~~~~~~~~~~~ 32 (110)
T cd00586 4 EIRVRFGDTDAAGHVNNARYLRYFEEARE 32 (110)
T ss_pred EEEEEEhhcCCCCEEchhHHHHHHHHHHH
Confidence 56789999999999999999999999864
No 28
>COG2050 PaaI HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.02 E-value=0.028 Score=46.87 Aligned_cols=105 Identities=14% Similarity=0.111 Sum_probs=84.6
Q ss_pred eEEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEE
Q 022145 102 GYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEI 181 (302)
Q Consensus 102 ~f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I 181 (302)
.-+..+.+......+.|.++=..++.+++.+....... ....+..-+-+..+++|.||.+-|+ ++.
T Consensus 35 ~~~~~l~~~~~~~~~~G~~HGG~i~alaD~a~~~a~~~-------------~~~~~~~~~ti~l~i~flr~~~~g~-v~a 100 (141)
T COG2050 35 EAEATLPVDPELLNPGGILHGGVIAALADSAAGLAANS-------------LLGVVALAVTLELNINFLRPVKEGD-VTA 100 (141)
T ss_pred eEEEEeecCHHHcCCCceeeHHHHHHHHHHHHHHHHhh-------------ccCccceeEEEEEEehhccCCCCCe-EEE
Confidence 44677788888888999999999999998887655421 0111122277899999999999999 999
Q ss_pred EEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEEEEec
Q 022145 182 DTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMNQ 220 (302)
Q Consensus 182 ~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~ 220 (302)
+..+.+.|+.....+.++++++.|+++|.++.++..++.
T Consensus 101 ~a~v~~~G~~~~v~~i~v~~~~~~~lva~~~~t~~v~~~ 139 (141)
T COG2050 101 EARVLHLGRRVAVVEIEVKNDEGGRLVAKGTGTYAVLRK 139 (141)
T ss_pred EEEEEeeCCEEEEEEEEEEECCCCeEEEEEEEEEEEecC
Confidence 999999999988888999965667999999999998864
No 29
>cd03449 R_hydratase (R)-hydratase [(R)-specific enoyl-CoA hydratase] catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. (R)-hydratase contains a hot-dog fold similar to those of thioesterase II, and beta-hydroxydecanoyl-ACP dehydratase, MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit. The active site lies within a substrate-binding tunnel formed by the (R)-hydratase homodimer. A subset of the bacterial (R)-hydratases contain a C-terminal phosphotransacetylase (PTA) domain.
Probab=96.60 E-value=0.03 Score=44.95 Aligned_cols=57 Identities=7% Similarity=0.015 Sum_probs=46.4
Q ss_pred eEEEEEeeeeeeeccCCCCCEEEEEEEEeeeCC--ceEEEEEEEEEcCCCcEEEEEEEEE
Q 022145 158 LIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGK--NGMRRDWLIRSQATGHIFARATSTW 215 (302)
Q Consensus 158 ~~wVV~r~~i~~~r~p~~gD~I~I~Twv~~~g~--~~~~R~f~I~d~~~Gelia~a~s~w 215 (302)
...+....+++|.+|...||+|+++.++..... ..+.....+.+ ++|+++++|+.+.
T Consensus 68 ~~~~~~~~~~~f~~Pv~~gd~l~~~~~v~~~~~~~~~v~~~~~~~~-~~g~~v~~g~~~~ 126 (128)
T cd03449 68 PGTIYLSQSLRFLRPVFIGDTVTATVTVTEKREDKKRVTLETVCTN-QNGEVVIEGEAVV 126 (128)
T ss_pred ceEEEEEEEEEECCCccCCCEEEEEEEEEEEecCCCEEEEEEEEEe-CCCCEEEEEEEEE
Confidence 355667889999999999999999999987654 45666677887 6899999998654
No 30
>KOG3328 consensus HGG motif-containing thioesterase [General function prediction only]
Probab=96.53 E-value=0.035 Score=47.10 Aligned_cols=102 Identities=21% Similarity=0.097 Sum_probs=82.2
Q ss_pred eEEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEE
Q 022145 102 GYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEI 181 (302)
Q Consensus 102 ~f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I 181 (302)
.-+.+++|....++++|.+.......+.+..++.-+- +......-|-+.+++.|..+.+.||.|.|
T Consensus 38 rv~ce~kV~~~~~N~~k~LHGG~tAtLvD~i~s~~~~--------------~~~~~~~gvsvdLsvsyL~~AklGe~l~i 103 (148)
T KOG3328|consen 38 RVSCELKVTPDHLNRFKTLHGGATATLVDLITSAALL--------------MTSGFKPGVSVDLSVSYLSSAKLGEELEI 103 (148)
T ss_pred eEEEEEEeCHHHcCccccccccchhhHHHHHhhHHHH--------------hccCCCCceEEEEEhhhccccCCCCeEEE
Confidence 4578899999999999999999888888877654321 11222345678899999999999999999
Q ss_pred EEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEEE
Q 022145 182 DTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVM 217 (302)
Q Consensus 182 ~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV~ 217 (302)
+..+.+.|+.-..-+-+++...+|++++.+.-+-.+
T Consensus 104 ~a~~vr~Gk~la~t~v~l~~K~t~kiia~grhtk~~ 139 (148)
T KOG3328|consen 104 EATVVRVGKTLAFTDVELRRKSTGKIIAKGRHTKYF 139 (148)
T ss_pred EEEEeecCceEEEEEEEEEEcCCCeEEEecceEEEe
Confidence 999999999988878888887789999998755443
No 31
>PLN02322 acyl-CoA thioesterase
Probab=96.41 E-value=0.18 Score=43.20 Aligned_cols=104 Identities=10% Similarity=-0.084 Sum_probs=80.0
Q ss_pred eEEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEE
Q 022145 102 GYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEI 181 (302)
Q Consensus 102 ~f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I 181 (302)
..+.++.|+...+.+.|.++=..++.+++-|.. .+.. ....+...+-++++++|.+|.+.|+.|+.
T Consensus 27 ~~~~~m~v~~~~~N~~G~vHGGv~atLaDta~g-~A~~-------------~~~~~~~~vTiel~infLrpa~~G~~L~A 92 (154)
T PLN02322 27 RVTGRLPVSPMCCQPFKVLHGGVSALIAESLAS-LGAH-------------MASGFKRVAGIQLSINHLKSADLGDLVFA 92 (154)
T ss_pred EEEEEEECCHHHcCCCCCccHHHHHHHHHHHHH-HHHh-------------hccCCCceEEEEEEEEEeccCCCCCEEEE
Confidence 345667788888999999999999999976543 2110 01122356788999999999999999999
Q ss_pred EEEEeeeCCceEEEEEEEEEc----C-CCcEEEEEEEEEEEEe
Q 022145 182 DTWVGASGKNGMRRDWLIRSQ----A-TGHIFARATSTWVMMN 219 (302)
Q Consensus 182 ~Twv~~~g~~~~~R~f~I~d~----~-~Gelia~a~s~wV~vD 219 (302)
+.++.+.|+.....+-+|++. + +|++++.++.+..++.
T Consensus 93 ea~vv~~Gr~~~~~ev~V~~~~~~~~~~~~lva~a~~T~~~~~ 135 (154)
T PLN02322 93 EATPVSTGKTIQVWEVKLWKTTDKDKANKILISSSRVTLICNL 135 (154)
T ss_pred EEEEEecCCCEEEEEEEEEECCCCcccCCeEEEEEEEEEEEcc
Confidence 999999999888888889872 1 2688999988776553
No 32
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=96.31 E-value=0.0013 Score=66.22 Aligned_cols=29 Identities=21% Similarity=0.300 Sum_probs=26.4
Q ss_pred cccccCCCCCcccCCCchHHHHHHHHhhC
Q 022145 266 SDLKPKRSDLDMNHHVNNVKYVRWMLENT 294 (302)
Q Consensus 266 ~~~~Vr~sDLD~NgHVNN~~Yl~w~ld~l 294 (302)
.+++|++.|+|.||||||++|++|+.++.
T Consensus 348 ~~~~V~~~~~D~~Ghvnn~~Yl~~~e~Ar 376 (495)
T PRK07531 348 VETKVPPAWVDYNGHMTEHRYLQVFGDTT 376 (495)
T ss_pred EeEEECHHHcCCCCeEcHHHHHHHHHHHH
Confidence 46789999999999999999999999763
No 33
>PF12590 Acyl-thio_N: Acyl-ATP thioesterase; InterPro: IPR021113 This entry represents the N-terminal domain of acyl-ATP thioesterases from bacteria and eukaryotes. These proteins are typically between 120 and 131 amino acids in length. The plant acyl-acyl carrier protein (ACP) thioesterases (TEs) play an essential role in chain termination during de novo fatty acid synthesis [].; GO: 0016790 thiolester hydrolase activity
Probab=95.96 E-value=0.0011 Score=54.23 Aligned_cols=28 Identities=25% Similarity=0.121 Sum_probs=25.1
Q ss_pred ccccccceeeeehhhhhhccccccchhhhh
Q 022145 49 HSQTTGVASTFVASVAAEKEGCRINEVQIR 78 (302)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (302)
-||.+.++||||. ||||||+.+++...|
T Consensus 96 WSMLLAAITTIFl--AAEKQW~mLDwKpkR 123 (129)
T PF12590_consen 96 WSMLLAAITTIFL--AAEKQWTMLDWKPKR 123 (129)
T ss_pred HHHHHHHHHHHHH--HhhhhhhhhcccCCC
Confidence 3788899999998 999999999988777
No 34
>PLN02647 acyl-CoA thioesterase
Probab=95.43 E-value=0.44 Score=47.51 Aligned_cols=117 Identities=8% Similarity=0.010 Sum_probs=80.8
Q ss_pred eEEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEE
Q 022145 102 GYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEI 181 (302)
Q Consensus 102 ~f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I 181 (302)
.-+....+...|.+..|.++=..+|+|+.+++.--+. .+ ..+..-.+.=-.++|.+|.+.||.|.+
T Consensus 290 ~~~~~~iv~P~d~N~~g~iFGG~LM~~~De~A~i~A~-------------r~-a~~~~vt~svd~v~F~~PV~vGdil~l 355 (437)
T PLN02647 290 RLENSLICQPQQRNIHGRIFGGFLMRRAFELAFSTAY-------------AF-AGLRPYFLEVDHVDFLRPVDVGDFLRF 355 (437)
T ss_pred ceEEEEEeCccccCCCCcEeHHHHHHHHHHHHHHHHH-------------HH-cCCceEEEEecceEecCccccCcEEEE
Confidence 3456677899999999999999999999998764331 01 122233333358999999999999998
Q ss_pred EEEEeee-----CCceEEEEEEE--EE--cCCCcEEEEEEEEEEEEecC-CCccccCCHHH
Q 022145 182 DTWVGAS-----GKNGMRRDWLI--RS--QATGHIFARATSTWVMMNQQ-TRRLSKIPAEV 232 (302)
Q Consensus 182 ~Twv~~~-----g~~~~~R~f~I--~d--~~~Gelia~a~s~wV~vD~~-tRRpvriPeel 232 (302)
+..+... |+.++..+-.+ .+ ..+++++..+..++|..|.. .++|+++|+.+
T Consensus 356 ~A~V~yt~~~s~g~~~i~veV~v~v~~~~~~~~~~~n~~~fTfva~d~~~~g~p~~Vp~V~ 416 (437)
T PLN02647 356 KSCVLYTELENSEQPLINVEVVAHVTRPELRSSEVSNTFYFTFTVRPEAAMKNGFKIRNVV 416 (437)
T ss_pred EEEEEEEeEEecCceEEEEEEEEEEEcCCCCcceEEEEEEEEEEEeccccCCCCccCCeee
Confidence 7666444 34444433222 22 13456788999999998863 67888887643
No 35
>PRK00006 fabZ (3R)-hydroxymyristoyl-ACP dehydratase; Reviewed
Probab=95.23 E-value=1.5 Score=36.44 Aligned_cols=130 Identities=10% Similarity=0.019 Sum_probs=77.2
Q ss_pred chhhhhccCCCCccccCcccccccccC--CceEEEEEEeeeCCCCCCCC------cCHHHHHHHHHHHHHHhHHhhcccc
Q 022145 73 NEVQIRQNIPTKKQFVDPYRHGLIIEG--GVGYRQTVVVRSYEVGPDKT------ATLESILNLFQETALNHVWMSGLLS 144 (302)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~e~--~~~f~~~~~Vr~~D~D~~G~------v~~~~yl~~~qeAa~~h~~~~~~~~ 144 (302)
+.+++.+.+|-..+| +...++.+- +........|...+.=..|| +.-.-+++++-+++..++. ..
T Consensus 8 ~~~~i~~~lPhr~p~---l~vD~i~~~~~~~~~~~~~~v~~d~~~~~ghfp~~pi~PG~l~iE~~aQ~~~~~~~---~~- 80 (147)
T PRK00006 8 DIEEILKLLPHRYPF---LLVDRVLELEPGKSIVAIKNVTINEPFFQGHFPGYPVMPGVLIIEAMAQAAGVLAL---KS- 80 (147)
T ss_pred CHHHHHHhCCCCCCe---eeEEEEEEEcCCCEEEEEEEecCCCccccCCCcCCCcCchhHHHHHHHHHHHHHHh---cC-
Confidence 345666677765544 222222222 23344455554444323444 4444566666666554421 00
Q ss_pred CCCCcccccccCCeEEEEEe-eeeeeeccCCCCCEEEEEEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEEEEe
Q 022145 145 NGFGATHGMMRNNLIWVVSR-MQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMN 219 (302)
Q Consensus 145 ~G~g~~~~l~~~g~~wVV~r-~~i~~~r~p~~gD~I~I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV~vD 219 (302)
. . ..+..+.+.. -+++|.+|.+.||+|+++.++...++.....+.++. .+|+++++|+...++-|
T Consensus 81 -----~-~--~~~~~~~l~gi~~~kF~~pv~pGd~l~i~~~i~~~~~~~v~~~~~~~--~~g~~v~~~~~~~~~~~ 146 (147)
T PRK00006 81 -----E-E--NKGKLVYFAGIDKARFKRPVVPGDQLILEVELLKQRRGIWKFKGVAT--VDGKLVAEAELMFAIRD 146 (147)
T ss_pred -----c-C--cCCcEEEEeeeeEEEEccccCCCCEEEEEEEEEEeeCCEEEEEEEEE--ECCEEEEEEEEEEEEEc
Confidence 0 1 1233334444 479999999999999999999877666666667776 48999999998877543
No 36
>PRK13691 (3R)-hydroxyacyl-ACP dehydratase subunit HadC; Provisional
Probab=95.21 E-value=0.25 Score=42.68 Aligned_cols=63 Identities=8% Similarity=0.005 Sum_probs=47.9
Q ss_pred EEEeeeeeeeccCCCCCEEEEEEEEeeeC----CceEEEEEEEEEcCCCcEEEEEEEEEEEEecCCCc
Q 022145 161 VVSRMQVEIDHYPIWGEVVEIDTWVGASG----KNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRR 224 (302)
Q Consensus 161 VV~r~~i~~~r~p~~gD~I~I~Twv~~~g----~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~tRR 224 (302)
+-...+++|.+|.+.||+|+++.++.... +.......++.| ++|++++++..+++.-+..+.-
T Consensus 85 v~~~q~~~f~rPV~~GDtL~~~~~V~~~~~~~~~g~V~~~~~~~N-Q~Ge~V~~~~~~~~~~~~~~~~ 151 (166)
T PRK13691 85 VQVDQRFVFHKPVLAGDKLWARMDIHSVDERFGADIVVTRNVCTN-DDGELVMEAYTTLMGQQGDNSA 151 (166)
T ss_pred eeeeeEEEEeCCcCCCCEEEEEEEEEEEEEcCCCcEEEEEEEEEC-CCCCEEEEEEEEEEEecCCCce
Confidence 44557888999999999999999986552 124566677786 8999999999877766544433
No 37
>cd03455 SAV4209 SAV4209 is a Streptomyces avermitilis protein with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The alpha- and gamma-proteobacterial members of this CD have, in addition to a hot dog fold, an N-terminal extension.
Probab=95.19 E-value=0.17 Score=40.96 Aligned_cols=55 Identities=15% Similarity=0.119 Sum_probs=43.4
Q ss_pred EEEEeeeeeeeccCCCCCEEEEEEEEeeeCCc-eEEEEEEEEEcCCCcEEEEEEEEE
Q 022145 160 WVVSRMQVEIDHYPIWGEVVEIDTWVGASGKN-GMRRDWLIRSQATGHIFARATSTW 215 (302)
Q Consensus 160 wVV~r~~i~~~r~p~~gD~I~I~Twv~~~g~~-~~~R~f~I~d~~~Gelia~a~s~w 215 (302)
..+.+.+++|.+|...||+|+++.++...... ......++.+ ++|+++++++.+.
T Consensus 67 ~~~~~~~~rf~~pv~~Gdtl~~~~~v~~~~~~~~v~~~~~~~n-q~G~~v~~g~a~v 122 (123)
T cd03455 67 ARVKSFAFRLGAPLYAGDTLRFGGRVTAKRDDEVVTVELWARN-SEGDHVMAGTATV 122 (123)
T ss_pred ceEEEEEEEeeccccCCCEEEEEEEEEeeccCcEEEEEEEEEc-CCCCEEEeEEEEE
Confidence 44556799999999999999999999765332 5566677886 7999998887653
No 38
>cd00556 Thioesterase_II Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=95.01 E-value=0.16 Score=38.77 Aligned_cols=58 Identities=12% Similarity=0.014 Sum_probs=50.8
Q ss_pred eEEEEEeeeeeeeccCCCCCEEEEEEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEE
Q 022145 158 LIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (302)
Q Consensus 158 ~~wVV~r~~i~~~r~p~~gD~I~I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (302)
..-+...+++.|.+|+..++.+..+.++...|+....++-+|++ ++|++++.+.....
T Consensus 41 ~~~~t~~~~i~F~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~-~~G~lva~~~~~~~ 98 (99)
T cd00556 41 SGFASLDHHIYFHRPGDADEWLLYEVESLRDGRSRALRRGRAYQ-RDGKLVASATQSFL 98 (99)
T ss_pred CCeeeeEEEEEEcCCCCCCccEEEEEEecccCCCceEEEEEEEC-CCCcEEEEEEEeEc
Confidence 34567789999999999999999999999999998888889996 67999999987653
No 39
>PF14539 DUF4442: Domain of unknown function (DUF4442); PDB: 1YOC_B 1SH8_B.
Probab=94.77 E-value=0.74 Score=38.02 Aligned_cols=99 Identities=13% Similarity=0.062 Sum_probs=64.3
Q ss_pred eEEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEE
Q 022145 102 GYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEI 181 (302)
Q Consensus 102 ~f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I 181 (302)
..+.++..++.--+..|.++-.+++...+-+....+.. ....+..|++..++++|.+|.+ ..|..
T Consensus 30 ~~~v~l~~~~~~~N~~gt~h~gAl~~laE~~~g~~~~~-------------~l~~~~~~~~k~~~i~f~kpa~--g~v~a 94 (132)
T PF14539_consen 30 RVVVRLPLRPRNRNHVGTIHAGALFTLAEPAYGLLLMS-------------NLGDKYRVWDKSAEIDFLKPAR--GDVTA 94 (132)
T ss_dssp EEEEEE-S-CCGB-TTSSB-HHHHHHHHHCHHHHHHHH-------------HS-TTEEEEEEEEEEEE-S-----S-EEE
T ss_pred EEEEEEcCCccccCcCcchHHHHHHHHHHHHHHHHHHH-------------hCCCcEEEEEEeeEEEEEeccC--CcEEE
Confidence 55677888888999999999999999998876554320 1123678889999999999965 44555
Q ss_pred EEEEee--eC-CceEEEEEEEEEcCCCcEEEEEEEEEE
Q 022145 182 DTWVGA--SG-KNGMRRDWLIRSQATGHIFARATSTWV 216 (302)
Q Consensus 182 ~Twv~~--~g-~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (302)
+..+.. .+ +........|+| .+|++++++..+|-
T Consensus 95 ~~~~~~e~~~~~~~~~~~v~i~D-~~G~~Va~~~~t~~ 131 (132)
T PF14539_consen 95 TAELTEEQIGERGELTVPVEITD-ADGEVVAEATITWY 131 (132)
T ss_dssp EEE-TCCHCCHEEEEEEEEEEEE-TTC-EEEEEEEEEE
T ss_pred EEEcCHHHhCCCcEEEEEEEEEE-CCCCEEEEEEEEEE
Confidence 444432 33 344566677887 89999999999984
No 40
>cd01288 FabZ FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway.
Probab=94.72 E-value=0.32 Score=39.17 Aligned_cols=86 Identities=8% Similarity=-0.026 Sum_probs=59.0
Q ss_pred cCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEEEEEEeeeCCceEEEEEEE
Q 022145 120 ATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLI 199 (302)
Q Consensus 120 v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I~Twv~~~g~~~~~R~f~I 199 (302)
+.-.-.+.++.+++..+... . + .....+..+.+.-.+++|.+|++.||+|++++++...+......+.++
T Consensus 45 ~Pg~l~iE~~aQ~~~~~~~~---~--~-----~~~~~~~~~l~~~~~~kf~~pv~pgd~l~i~~~v~~~~~~~~~~~~~~ 114 (131)
T cd01288 45 MPGVLIIEALAQAAGILGLK---S--L-----EDFEGKLVYFAGIDKARFRKPVVPGDQLILEVELLKLRRGIGKFKGKA 114 (131)
T ss_pred CCchHHHHHHHHHHHHHhhh---c--c-----cccCCcEEEEeeecccEEccccCCCCEEEEEEEEEEeeCCEEEEEEEE
Confidence 33444666777776655310 0 0 001233455555589999999999999999999988776666666777
Q ss_pred EEcCCCcEEEEEEEEEEE
Q 022145 200 RSQATGHIFARATSTWVM 217 (302)
Q Consensus 200 ~d~~~Gelia~a~s~wV~ 217 (302)
+ .+|+++++|+...+.
T Consensus 115 ~--~~g~~v~~~~~~~~~ 130 (131)
T cd01288 115 Y--VDGKLVAEAELMFAI 130 (131)
T ss_pred E--ECCEEEEEEEEEEEE
Confidence 6 489999999887664
No 41
>TIGR01750 fabZ beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ. This enzyme, FabZ, shows overlapping substrate specificity with FabA with regard to chain length in fatty acid biosynthesis. FabZ works preferentially on shorter chains and is often designated (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase, although its actual specificity is broader. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains.
Probab=94.68 E-value=1.9 Score=35.49 Aligned_cols=104 Identities=9% Similarity=-0.063 Sum_probs=64.6
Q ss_pred eEEEEEEeeeCCCCCCCC------cCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEe-eeeeeeccCC
Q 022145 102 GYRQTVVVRSYEVGPDKT------ATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSR-MQVEIDHYPI 174 (302)
Q Consensus 102 ~f~~~~~Vr~~D~D~~G~------v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r-~~i~~~r~p~ 174 (302)
..+....|+..+.=..|| +--.-+++++-+++..++ |.... .....+....+.. .+++|.++.+
T Consensus 29 ~~~~~~~v~~~~~~f~gHFp~~pv~Pg~l~iE~~aQ~~~~~~--------~~~~~-~~~~~~~~~~l~~~~~~kF~~~v~ 99 (140)
T TIGR01750 29 RIVAIKNVTINEPFFQGHFPEKPIMPGVLIVEALAQAGGVLA--------ILSLG-GEIGKGKLVYFAGIDKAKFRRPVV 99 (140)
T ss_pred EEEEEEEcCCCCCeecCCCcCcCcChHHHHHHHHHHHHHHHh--------ecccc-ccCCCCcEEEEeecceeEECCccC
Confidence 344445555444323343 445557777777765542 11100 0111223334444 6999999999
Q ss_pred CCCEEEEEEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEE
Q 022145 175 WGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (302)
Q Consensus 175 ~gD~I~I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (302)
.||+|++..++..........+.+++ .+|+++++|+...+
T Consensus 100 pGd~l~i~~~i~~~~~~~~~~~~~~~--~~g~~va~~~~~~~ 139 (140)
T TIGR01750 100 PGDQLILHAEFLKKRRKIGKFKGEAT--VDGKVVAEAEITFA 139 (140)
T ss_pred CCCEEEEEEEEEEccCCEEEEEEEEE--ECCEEEEEEEEEEE
Confidence 99999999999876655556666675 48999999988764
No 42
>cd03441 R_hydratase_like (R)-hydratase [(R)-specific enoyl-CoA hydratase]. Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.
Probab=94.48 E-value=0.4 Score=38.10 Aligned_cols=56 Identities=11% Similarity=-0.026 Sum_probs=44.5
Q ss_pred eEEEEEeeeeeeeccCCCCCEEEEEEEEeeeCC----ceEEEEEEEEEcCCCcEEEEEEEE
Q 022145 158 LIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGK----NGMRRDWLIRSQATGHIFARATST 214 (302)
Q Consensus 158 ~~wVV~r~~i~~~r~p~~gD~I~I~Twv~~~g~----~~~~R~f~I~d~~~Gelia~a~s~ 214 (302)
..+++...+++|.+|.+.||+|+++.++..... ..........+ ++|+++..|++.
T Consensus 66 ~~~~~~~~~~~f~~Pv~~Gd~l~~~~~v~~~~~~~~~~~v~~~~~~~n-~~g~~v~~g~~~ 125 (127)
T cd03441 66 DGANLGSQSVRFLAPVFPGDTLRVEVEVLGKRPSKGRGVVTVRTEARN-QGGEVVLSGEAT 125 (127)
T ss_pred ccceeEEeEEEEeCCcCCCCEEEEEEEEEEeeccCCCcEEEEEEEEEe-CCCCEEEEEEEE
Confidence 467788999999999999999999999977643 34566677776 688888877653
No 43
>PRK13692 (3R)-hydroxyacyl-ACP dehydratase subunit HadA; Provisional
Probab=94.45 E-value=0.53 Score=40.32 Aligned_cols=60 Identities=8% Similarity=0.119 Sum_probs=47.5
Q ss_pred EeeeeeeeccCCCCCEEEEEEEEeeeC----CceEEEEEEEEEcCCCcEEEEEEEEEEEEecCCC
Q 022145 163 SRMQVEIDHYPIWGEVVEIDTWVGASG----KNGMRRDWLIRSQATGHIFARATSTWVMMNQQTR 223 (302)
Q Consensus 163 ~r~~i~~~r~p~~gD~I~I~Twv~~~g----~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~tR 223 (302)
...+++|.+|.+.||+|+++.++.... +-.+..+.++++ ++|+++++++++.+.-..+.+
T Consensus 87 ~~q~~~f~~PV~~GDtL~~~~eV~~~~~~~~~giv~~~~~v~N-q~Ge~V~~~~~~~~~r~~~~~ 150 (159)
T PRK13692 87 VDQVLKFEKPIVAGDKLYCDVYVDSVREAHGTQIIVTKNIVTN-EEGDVVQETYTTLAGRAGEDG 150 (159)
T ss_pred eeeEEEEeCCccCCCEEEEEEEEEEEEEcCCceEEEEEEEEEc-CCCCEEEEEEEEEEEecCCcC
Confidence 347899999999999999999986442 234567778887 799999999999888765544
No 44
>COG4109 Predicted transcriptional regulator containing CBS domains [Transcription]
Probab=94.33 E-value=0.31 Score=47.11 Aligned_cols=102 Identities=20% Similarity=0.163 Sum_probs=84.1
Q ss_pred cccCCceEEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCC
Q 022145 96 IIEGGVGYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIW 175 (302)
Q Consensus 96 ~~e~~~~f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~ 175 (302)
+.|.+..+..+++|.+.-++..|.+.+..+..++.++....+. ..++--.++=++.+-|.+|...
T Consensus 326 l~e~~~~~~~t~~V~P~M~n~~Gtis~gv~~~ll~e~~qr~l~---------------k~~~~niiIE~i~iyflk~vqi 390 (432)
T COG4109 326 LSEKGDEYGVTVEVEPQMINSLGTISNGVFTELLTEVVQRVLR---------------KKKKRNIIIENITIYFLKPVQI 390 (432)
T ss_pred hhhhccccceEEEechhhccccccchHHHHHHHHHHHHHHHHH---------------HhcCCceEEEeeeeeeecceec
Confidence 4555666777799999999999999999999999998765432 1223355677889999999999
Q ss_pred CCEEEEEEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEE
Q 022145 176 GEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATST 214 (302)
Q Consensus 176 gD~I~I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~ 214 (302)
.+.|+|...+...||.+...+++|+. +|.+++.|-..
T Consensus 391 d~~l~I~prIl~~gR~~a~idvei~~--~~~ivaKAiv~ 427 (432)
T COG4109 391 DSVLEIYPRILEEGRKFAKIDVEIYH--DGQIVAKAIVT 427 (432)
T ss_pred ccEEEEeeeeeccccccceeEEEEee--Ccchhhhheee
Confidence 99999999999999999999999995 78888777543
No 45
>cd03447 FAS_MaoC FAS_MaoC, the MaoC-like hot dog fold of the fatty acid synthase, beta subunit. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and 17-beta-hydroxysteriod dehydrogenase (HSD).
Probab=94.21 E-value=0.58 Score=38.38 Aligned_cols=53 Identities=9% Similarity=-0.007 Sum_probs=41.8
Q ss_pred EEEeeeeeeeccCCCCCEEEEEEEEeeeCCceEEEEEEEEEcCC-CcEEEEEEEE
Q 022145 161 VVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQAT-GHIFARATST 214 (302)
Q Consensus 161 VV~r~~i~~~r~p~~gD~I~I~Twv~~~g~~~~~R~f~I~d~~~-Gelia~a~s~ 214 (302)
.+.+++++|.+|.+.||+|+++.|+.+........++++++ ++ |+++.+++..
T Consensus 69 ~~~~~~~rf~~PV~~gdtl~~~~~v~~~~~~~~~~~~~~~n-q~~g~~V~~g~~~ 122 (126)
T cd03447 69 RVRSFTASFVGMVLPNDELEVRLEHVGMVDGRKVIKVEARN-EETGELVLRGEAE 122 (126)
T ss_pred eEEEEEEEEcccCcCCCEEEEEEEEEEEeCCeEEEEEEEEE-CCCCCEEEEEEEE
Confidence 33457999999999999999999998765445566778887 55 8888888754
No 46
>cd03454 YdeM YdeM is a Bacillus subtilis protein that belongs to a family of prokaryotic proteins of unkown function. YdeM has sequence similarity to the hot-dog fold of (R)-specific enoyl-CoA hydratase. Other enzymes with this fold include the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=94.09 E-value=0.28 Score=40.35 Aligned_cols=51 Identities=8% Similarity=-0.026 Sum_probs=40.8
Q ss_pred eeeeeeccCCCCCEEEEEEEEeeeC-------CceEEEEEEEEEcCCCcEEEEEEEEEE
Q 022145 165 MQVEIDHYPIWGEVVEIDTWVGASG-------KNGMRRDWLIRSQATGHIFARATSTWV 216 (302)
Q Consensus 165 ~~i~~~r~p~~gD~I~I~Twv~~~g-------~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (302)
.+++|.+|.+.||+|+++.++.... +........+.+ ++|++++++..+.+
T Consensus 81 ~~~~f~~pv~~Gd~l~~~~~v~~~~~~~~~~~~~~v~~~~~~~n-q~g~~v~~~~~~~~ 138 (140)
T cd03454 81 DELRWPRPVRPGDTLSVEVEVLDKRPSRSRPDRGIVTLRSETLN-QRGEVVLTFEATVL 138 (140)
T ss_pred eeeEeCCCCCCCCEEEEEEEEEEEeecCCCCCCeEEEEEEEEEc-CCCCEEEEEEehhe
Confidence 4899999999999999999997653 224566677886 79999999987654
No 47
>cd03446 MaoC_like MoaC_like Similar to the MaoC (monoamine oxidase C) dehydratase regulatory protein but without the N-terminal PutA domain. This protein family has a hot-dog fold similar to that of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=94.05 E-value=0.5 Score=38.67 Aligned_cols=51 Identities=8% Similarity=0.102 Sum_probs=40.3
Q ss_pred eeeeeeccCCCCCEEEEEEEEeeeCC------ceEEEEEEEEEcCCCcEEEEEEEEEE
Q 022145 165 MQVEIDHYPIWGEVVEIDTWVGASGK------NGMRRDWLIRSQATGHIFARATSTWV 216 (302)
Q Consensus 165 ~~i~~~r~p~~gD~I~I~Twv~~~g~------~~~~R~f~I~d~~~Gelia~a~s~wV 216 (302)
.+++|.+|.+.||+|+++.++..... ..+....++++ ++|++++++.++.+
T Consensus 83 ~~~~f~~pv~~GD~l~~~~~v~~~~~~~~~~~~~v~~~~~~~n-q~g~~v~~~~~~~l 139 (140)
T cd03446 83 DNLRFLNPVFIGDTIRAEAEVVEKEEKDGEDAGVVTRRIEVVN-QRGEVVQSGEMSLL 139 (140)
T ss_pred ceEEEcCCCCCCCEEEEEEEEEEecccCCCCceEEEEEEEEEc-CCCCEEEEEEEeee
Confidence 48999999999999999999976531 23455667776 79999999987654
No 48
>cd03453 SAV4209_like SAV4209_like. Similar in sequence to the Streptomyces avermitilis SAV4209 protein, with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=93.88 E-value=0.49 Score=38.45 Aligned_cols=51 Identities=8% Similarity=-0.020 Sum_probs=40.5
Q ss_pred EeeeeeeeccCCCCCEEEEEEEEeee----CCceEEEEEEEEEcCCCcEEEEEEEE
Q 022145 163 SRMQVEIDHYPIWGEVVEIDTWVGAS----GKNGMRRDWLIRSQATGHIFARATST 214 (302)
Q Consensus 163 ~r~~i~~~r~p~~gD~I~I~Twv~~~----g~~~~~R~f~I~d~~~Gelia~a~s~ 214 (302)
.+++++|.+|.+.||+|+++.++... ++.....+.++.+ ++|+++..|+..
T Consensus 71 ~~~~~rf~~Pv~~Gdtl~~~~~v~~~~~~~~~~~v~~~~~~~n-q~g~~v~~g~a~ 125 (127)
T cd03453 71 VSFGVRFTKPVPVPDTLTCTGIVVEKTVADGEDALTVTVDATD-QAGGKKVLGRAI 125 (127)
T ss_pred EEEEEEECCcCcCCCEEEEEEEEEEEEecCCCcEEEEEEEEEE-cCCCEEEEEEEE
Confidence 56789999999999999999998653 2234566788887 789988888754
No 49
>PRK04424 fatty acid biosynthesis transcriptional regulator; Provisional
Probab=93.50 E-value=0.74 Score=40.43 Aligned_cols=59 Identities=10% Similarity=-0.065 Sum_probs=46.0
Q ss_pred CeEEEEEeeeeeeeccCCCCCEEEEEEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEEE
Q 022145 157 NLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVM 217 (302)
Q Consensus 157 g~~wVV~r~~i~~~r~p~~gD~I~I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV~ 217 (302)
+..-+....+++|.+|.+.||+|.+++++...++........++ .+|+++++|....+.
T Consensus 123 ~~~~~~~i~~irF~kPV~pGD~L~~ea~v~~~~~~~~~v~~~~~--v~g~~V~ege~~~~~ 181 (185)
T PRK04424 123 AELALTGVANIRFKRPVKLGERVVAKAEVVRKKGNKYIVEVKSY--VGDELVFRGKFIMYR 181 (185)
T ss_pred CcEEEEEeeeEEEccCCCCCCEEEEEEEEEEccCCEEEEEEEEE--ECCEEEEEEEEEEEE
Confidence 34455566799999999999999999999877665544445555 589999999887755
No 50
>cd03451 FkbR2 FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes. FkbR2 has sequence similarity to (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The function of FkbR2 is unknown.
Probab=93.49 E-value=0.43 Score=39.34 Aligned_cols=52 Identities=10% Similarity=-0.025 Sum_probs=40.6
Q ss_pred eeeeeeccCCCCCEEEEEEEEeeeCC-------ceEEEEEEEEEcCCCcEEEEEEEEEEE
Q 022145 165 MQVEIDHYPIWGEVVEIDTWVGASGK-------NGMRRDWLIRSQATGHIFARATSTWVM 217 (302)
Q Consensus 165 ~~i~~~r~p~~gD~I~I~Twv~~~g~-------~~~~R~f~I~d~~~Gelia~a~s~wV~ 217 (302)
.+++|.+|.+.||+|+++.++..... ..+....++.+ ++|+++++++.+.++
T Consensus 84 ~~~~f~~pv~~GDtl~~~~~v~~~~~~~~~~~~~~v~~~~~~~n-q~g~~V~~~~~~~~~ 142 (146)
T cd03451 84 DEVRFPAPVFHGDTLYAESEVLSKRESKSRPDAGIVTVRTVGYN-QDGEPVLSFERTALV 142 (146)
T ss_pred cEEEecCCCCCCCEEEEEEEEEEEecCCCCCCCeEEEEEEEEEC-CCCCEEEEEEehhEE
Confidence 48999999999999999999976532 24455566775 799999999876543
No 51
>cd00493 FabA_FabZ FabA/Z, beta-hydroxyacyl-acyl carrier protein (ACP)-dehydratases: One of several distinct enzyme types of the dissociative, type II, fatty acid synthase system (found in bacteria and plants) required to complete successive cycles of fatty acid elongation. The third step of the elongation cycle, the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, is catalyzed by FabA or FabZ. FabA is bifunctional and catalyzes an additional isomerization reaction of trans-2-acyl-ACP to cis-3-acyl-ACP, an essential reaction to unsaturated fatty acid synthesis. FabZ is the primary dehydratase that participates in the elongation cycles of saturated as well as unsaturated fatty acid biosynthesis, whereas FabA is more active in the dehydration of beta-hydroxydecanoyl-ACP. The FabA structure is homodimeric with two independent active sites located at the dimer interface.
Probab=93.03 E-value=3.8 Score=32.64 Aligned_cols=86 Identities=15% Similarity=0.114 Sum_probs=61.0
Q ss_pred CCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEEEEEEeeeCCceEEEE
Q 022145 117 DKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRD 196 (302)
Q Consensus 117 ~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I~Twv~~~g~~~~~R~ 196 (302)
++.+--.-.++++-+++..++.. . +... . .....+..+.--+++|.++.+-||+++++.++...+......+
T Consensus 41 ~p~lPg~~~iE~~aQ~~~~~~~~---~--~~~~--~-~~~~~~~l~~~~~~kf~~~v~pgd~l~i~~~i~~~~~~~~~~~ 112 (131)
T cd00493 41 DPVMPGVLGIEAMAQAAAALAGL---L--GLGK--G-NPPRLGYLAGVRKVKFRGPVLPGDTLTLEVELLKVRRGLGKFD 112 (131)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHh---c--cccc--c-cCCcEEEEEEcceeEECCCcCCCCEEEEEEEEEEeeCCEEEEE
Confidence 45677788888998888777521 1 1100 0 1223344455569999999999999999999988766566666
Q ss_pred EEEEEcCCCcEEEEEE
Q 022145 197 WLIRSQATGHIFARAT 212 (302)
Q Consensus 197 f~I~d~~~Gelia~a~ 212 (302)
..++. +|+++++++
T Consensus 113 ~~~~~--~g~~v~~~~ 126 (131)
T cd00493 113 GRAYV--DGKLVAEAE 126 (131)
T ss_pred EEEEE--CCEEEEEEE
Confidence 77775 699999998
No 52
>PF13452 MaoC_dehydrat_N: N-terminal half of MaoC dehydratase; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1S9C_K 3OML_A 3KHP_A.
Probab=91.88 E-value=0.64 Score=37.75 Aligned_cols=52 Identities=12% Similarity=0.026 Sum_probs=37.2
Q ss_pred eEEEEEeeeeeeeccCCCCCEEEEEEEEeeeCC------c-eEEEEEEEEEcCCCcEEEE
Q 022145 158 LIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGK------N-GMRRDWLIRSQATGHIFAR 210 (302)
Q Consensus 158 ~~wVV~r~~i~~~r~p~~gD~I~I~Twv~~~g~------~-~~~R~f~I~d~~~Gelia~ 210 (302)
..-+-...+++|++|++.||+|++++.+..+.. . .+..+.+++| ++|+++++
T Consensus 73 ~~~vh~~~~~~~h~Pl~~Gd~l~~~~~v~~v~~k~g~G~~~~v~~~~~~~~-~~Ge~v~t 131 (132)
T PF13452_consen 73 TRLVHGEQDIEFHRPLRPGDTLTATSRVTDVYDKRGAGKGVFVTVETEYTD-QDGELVAT 131 (132)
T ss_dssp GGEEEEEEEEEESS--BSSEEEEEEEEEEEEEEES-TTSEEEEEEEEEEE--CTTEEEEE
T ss_pred hhEEecCcEEEEeCCCCCCCEEEEEEEEEEEEEecCCCCEEEEEEEEEEEC-CCCCEEEe
Confidence 455666799999999999999999999866421 2 2355677776 78999875
No 53
>cd03452 MaoC_C MaoC_C The C-terminal hot dog fold of the MaoC (monoamine oxidase C) dehydratase regulatory protein. Orthologs of MaoC include PaaZ [Escherichia coli] and PaaN [Pseudomonas putida], which are putative ring-opening enzymes involved in phenylacetic acid degradation. The C-terminal domain of MaoC has sequence similarity to (R)-specific enoyl-CoA hydratase,Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. MaoC also has an N-terminal PutA domain like that found in the E. coli PutA proline dehydrogenase and other members of the aldehyde dehydrogenase family.
Probab=91.29 E-value=1.2 Score=37.14 Aligned_cols=52 Identities=10% Similarity=0.035 Sum_probs=40.8
Q ss_pred eeeeeeccCCCCCEEEEEEEEeeeC--C----ceEEEEEEEEEcCCCcEEEEEEEEEEE
Q 022145 165 MQVEIDHYPIWGEVVEIDTWVGASG--K----NGMRRDWLIRSQATGHIFARATSTWVM 217 (302)
Q Consensus 165 ~~i~~~r~p~~gD~I~I~Twv~~~g--~----~~~~R~f~I~d~~~Gelia~a~s~wV~ 217 (302)
.+++|.+|.+.||+|+++..+.... + ..+....++.+ ++|+++++++....+
T Consensus 81 ~~~rf~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~n-q~g~~V~~~~~~~~~ 138 (142)
T cd03452 81 ENLRFLEPVYPGDTIQVRLTCKRKIPRDGQDYGVVRWDAEVTN-QNGELVASYDILTLV 138 (142)
T ss_pred ceEEECCCCCCCCEEEEEEEEEEEeecCCCCcEEEEEEEEEEe-cCCCEEEEEEehHee
Confidence 4999999999999999999986652 1 24566777787 789999998865543
No 54
>PRK08190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated
Probab=91.08 E-value=1.9 Score=43.27 Aligned_cols=66 Identities=12% Similarity=0.081 Sum_probs=49.1
Q ss_pred EEEEEeeeeeeeccCCCCCEEEEEEEEeee--CCceEEEEEEEEEcCCCcEEEEEEEEEEEEecCCCcc
Q 022145 159 IWVVSRMQVEIDHYPIWGEVVEIDTWVGAS--GKNGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRL 225 (302)
Q Consensus 159 ~wVV~r~~i~~~r~p~~gD~I~I~Twv~~~--g~~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~tRRp 225 (302)
+.+....+++|.+|.+.||+|+++.++... ++.......++++ ++|+++++++.++++-...-.+|
T Consensus 82 ~~~~~~~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~v~~~~~~~n-q~G~~V~~g~~~~l~~~~~~~~~ 149 (466)
T PRK08190 82 GTIYLGQSLRFRRPVRIGDTLTVTVTVREKDPEKRIVVLDCRCTN-QDGEVVITGTAEVIAPTEKVRRP 149 (466)
T ss_pred ceEEEEEEEEEeCCcCCCCEEEEEEEEEEEECCCCEEEEEEEEEe-CCCCEEEEEEEEeeccccccccc
Confidence 345567899999999999999999999654 3334556677787 79999999988776554443333
No 55
>TIGR02447 yiiD_Cterm thioesterase domain, putative. This family consists of a broadly distributed uncharacterized domain found often as a standalone protein. The member from Shewanella oneidensis, PDB|1T82_A (Forouhar, et al., unpublished) is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an Acetyltransf_1 domain (PFAM model pfam00583). The function of this protein is unknown.
Probab=90.61 E-value=8.8 Score=31.83 Aligned_cols=101 Identities=13% Similarity=0.115 Sum_probs=67.7
Q ss_pred EEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEEE
Q 022145 103 YRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEID 182 (302)
Q Consensus 103 f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I~ 182 (302)
...+..++.. .+..|.++=..++..+..+....+.. ... . ...+..-|..+.+++|.+|.+- + +.++
T Consensus 24 ~~v~~pl~~n-~N~~G~~hGG~l~tlad~a~~~~~~~--------~~~-~-~~~~~~~vt~~~~i~yl~P~~~-~-~~a~ 90 (138)
T TIGR02447 24 LRLSAPLAAN-INHHGTMFGGSLYTLATLSGWGLLWL--------RLQ-E-LGIDGDIVIADSHIRYLAPVTG-D-PVAN 90 (138)
T ss_pred EEEEeECCCC-cCCCCceehhHHHHHHHHHHHHHHHH--------HHH-H-hCCCCcEEEEEeeeEEcCCcCC-C-eEEE
Confidence 3556667774 89999999999999996543221110 000 1 1112345777999999999974 3 5555
Q ss_pred EEE-------------eeeCCceEEEEEEEEEcCCCcEEEEEEEEEEEE
Q 022145 183 TWV-------------GASGKNGMRRDWLIRSQATGHIFARATSTWVMM 218 (302)
Q Consensus 183 Twv-------------~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV~v 218 (302)
... ..-|+..+..+-+|++ +|+++|+++.+++.+
T Consensus 91 ~~~~~~~~~~~~~~~l~~~gr~~~~~~~~v~~--~~~lvA~~~g~~~~~ 137 (138)
T TIGR02447 91 CEAPDLESWEAFLATLQRGGKARVKLEAQISS--DGKLAATFSGEYVAL 137 (138)
T ss_pred EEcCCHHHHHHHHHHHHhCCceEEEEEEEEEE--CCEEEEEEEEEEEEe
Confidence 444 3456667677788884 779999999988865
No 56
>cd03445 Thioesterase_II_repeat2 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=89.19 E-value=3 Score=32.35 Aligned_cols=53 Identities=13% Similarity=0.031 Sum_probs=46.2
Q ss_pred EEEeeeeeeeccCCCCCEEEEEEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEE
Q 022145 161 VVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTW 215 (302)
Q Consensus 161 VV~r~~i~~~r~p~~gD~I~I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~w 215 (302)
.+...++.|.+|+..+..+++++....-|+....+.-... ++|++++.+...+
T Consensus 40 ~~~s~~~~Fl~p~~~~~pv~~~v~~lr~GRs~~~~~V~~~--Q~g~~~~~a~~sf 92 (94)
T cd03445 40 VPHSLHSYFLRPGDPDQPIEYEVERLRDGRSFATRRVRAV--QNGKVIFTATASF 92 (94)
T ss_pred CeEEEEEEecCCCCCCCCEEEEEEEEECCCcEEEEEEEEE--ECCEEEEEEEEEE
Confidence 3567999999999999999999999999999999888887 4799988887654
No 57
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=88.68 E-value=3.1 Score=37.50 Aligned_cols=57 Identities=19% Similarity=0.101 Sum_probs=47.0
Q ss_pred EEEEeeeeeeeccCCCCCEEEEEEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEEEEe
Q 022145 160 WVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMMN 219 (302)
Q Consensus 160 wVV~r~~i~~~r~p~~gD~I~I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV~vD 219 (302)
..+..+++.|.++...| .+++++...+.||....+.-+++ ++|+++++|+..+.--+
T Consensus 34 ~~~~s~~~~fl~p~~~~-~~~~~v~~~r~Gr~~~~~~v~~~--q~~~~~~~a~~~f~~~~ 90 (255)
T PF13622_consen 34 FDPHSLHVYFLRPVPPG-PVEYRVEVLRDGRSFSTRQVELS--QDGKVVATATASFGRPE 90 (255)
T ss_dssp SEEEEEEEEESS--BSC-EEEEEEEEEEESSSEEEEEEEEE--ETTEEEEEEEEEEE--T
T ss_pred CceEEEEeEeccccccC-CEEEEEEEeeCCCcEEEEEEEEE--ECCcCEEEEEEEEccCc
Confidence 67889999999999999 99999999999999999988998 48888888887655544
No 58
>PLN02864 enoyl-CoA hydratase
Probab=88.67 E-value=2.6 Score=40.11 Aligned_cols=59 Identities=12% Similarity=0.053 Sum_probs=46.7
Q ss_pred EEEeeeeeeeccCCCCCEEEEEEEEeeeCCc----eEEEEEEEEEcCCCcEEEEEEEEEEEEe
Q 022145 161 VVSRMQVEIDHYPIWGEVVEIDTWVGASGKN----GMRRDWLIRSQATGHIFARATSTWVMMN 219 (302)
Q Consensus 161 VV~r~~i~~~r~p~~gD~I~I~Twv~~~g~~----~~~R~f~I~d~~~Gelia~a~s~wV~vD 219 (302)
|=.+..++++||+..++.+++++++..+... .+..+..+.+..+|+++++..++.++-.
T Consensus 95 VHgeq~i~~~rPlp~~~~l~~~~~v~~v~dkG~ga~v~~~~~~~d~~~Ge~v~t~~st~~~Rg 157 (310)
T PLN02864 95 LHGQQYIEIYKPIPSSASVRNKVSIAGLHDKGKAAILELETLSYEKDSGELLCMNRSTIFLRG 157 (310)
T ss_pred eeccceEEEECCCCCCCEEEEEEEEEEEEeCCCcEEEEEEEEEEeCCCCcEEEEEEEEEEEeC
Confidence 4457899999999999999999999876222 2456677776568999999988888765
No 59
>cd03442 BFIT_BACH Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, and brown adipose tissues. The archeal and eukaryotic members of this family have two tandem copies of the conserved hot dog fold, while most bacterial members have only one copy.
Probab=88.47 E-value=0.3 Score=38.54 Aligned_cols=29 Identities=14% Similarity=0.083 Sum_probs=26.0
Q ss_pred cccccCCCCCcccCCCchHHHHHHHHhhC
Q 022145 266 SDLKPKRSDLDMNHHVNNVKYVRWMLENT 294 (302)
Q Consensus 266 ~~~~Vr~sDLD~NgHVNN~~Yl~w~ld~l 294 (302)
..++|++.|+|..||||+..|+.|+.++.
T Consensus 10 ~~~~v~~~~~d~~g~v~~g~~~~~~d~a~ 38 (123)
T cd03442 10 TRELVLPEDTNHHGTIFGGWLLEWMDELA 38 (123)
T ss_pred EEEEeCCcccCcCCcEeHHHHHHHHHHHH
Confidence 46789999999999999999999997763
No 60
>cd03440 hot_dog The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis.
Probab=87.00 E-value=0.25 Score=34.76 Aligned_cols=28 Identities=18% Similarity=0.076 Sum_probs=24.8
Q ss_pred ccccCCCCCcccCCCchHHHHHHHHhhC
Q 022145 267 DLKPKRSDLDMNHHVNNVKYVRWMLENT 294 (302)
Q Consensus 267 ~~~Vr~sDLD~NgHVNN~~Yl~w~ld~l 294 (302)
.++++..|+|.++|+|+..|+.|+.++.
T Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 31 (100)
T cd03440 4 RLTVTPEDIDGGGIVHGGLLLALADEAA 31 (100)
T ss_pred EEEeCHHHcCcCCccchHHHHHHHHHHH
Confidence 4568899999999999999999998765
No 61
>KOG4366 consensus Predicted thioesterase [General function prediction only]
Probab=86.91 E-value=0.19 Score=44.26 Aligned_cols=102 Identities=9% Similarity=0.001 Sum_probs=76.7
Q ss_pred eeeCCCCCCC-CcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEEEEEEee
Q 022145 109 VRSYEVGPDK-TATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGA 187 (302)
Q Consensus 109 Vr~~D~D~~G-~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I~Twv~~ 187 (302)
.-..|+|-.- |+||+.|++=++-|+.+|+..- |+ -..+...+-..|..-..+.|.|.++.-++..|.|.+..
T Consensus 57 cls~dlDtll~HmnNArYfrElDfAR~~~~~r~-----~l--~~~lr~~~~~~v~~As~~ryrr~Irpfh~y~v~sRiI~ 129 (213)
T KOG4366|consen 57 CLSTDLDTLLSHMNNARYFRELDFARVNFYCRT-----GL--YLMLRSKRGPYVQGASVFRYRREIRPFHPYSVSSRIIC 129 (213)
T ss_pred eecchHHHHHHHhhhhHHHHHhhHHHHHHHHHH-----hH--HHHHHhcCCCeeechhhhhhhhhcCCCCccceeeEEEE
Confidence 3446677655 9999999999999999987521 22 11244555566666677889999999999999999988
Q ss_pred eCCceEE--EEEEEEEcCCCcEEEEEEEEEEEEe
Q 022145 188 SGKNGMR--RDWLIRSQATGHIFARATSTWVMMN 219 (302)
Q Consensus 188 ~g~~~~~--R~f~I~d~~~Gelia~a~s~wV~vD 219 (302)
.....++ -.|.+. .+|=+++-+.+..++.|
T Consensus 130 WDekaiyle~rFv~~--sd~fvcala~~kq~l~d 161 (213)
T KOG4366|consen 130 WDEKAIYLESRFVIL--SDGFVCALALTKQVLKD 161 (213)
T ss_pred Echhhhhhhhheeec--cCceEeehHHHHHHHhc
Confidence 7655443 335555 58999999999999998
No 62
>PRK13188 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed
Probab=81.51 E-value=56 Score=33.01 Aligned_cols=60 Identities=7% Similarity=0.014 Sum_probs=43.6
Q ss_pred eEEEEEeeeeeeeccCCCCCEEEEEEEEee-eCCceEEEEEEEEEcCCCcEEEEEEEEEEEEe
Q 022145 158 LIWVVSRMQVEIDHYPIWGEVVEIDTWVGA-SGKNGMRRDWLIRSQATGHIFARATSTWVMMN 219 (302)
Q Consensus 158 ~~wVV~r~~i~~~r~p~~gD~I~I~Twv~~-~g~~~~~R~f~I~d~~~Gelia~a~s~wV~vD 219 (302)
.++.+.--+++|.+|.+.||++++++.+.. ..+.....+-+++ .+|+++++|....++.+
T Consensus 401 lg~LlgI~kvKF~~PV~PGDtL~I~veI~~~~~~giv~f~g~~~--vdGelVaeael~~~v~~ 461 (464)
T PRK13188 401 STYFMKIDKVKFRQKVVPGDTLIFKVELLSPIRRGICQMQGKAY--VNGKLVCEAELMAQIVK 461 (464)
T ss_pred eEEEEeccEEEEcCCCCCCCEEEEEEEEEEEecCCEEEEEEEEE--ECCEEEEEEEEEEEEec
Confidence 344443349999999999999999998865 3333334555566 48999999998877653
No 63
>cd03444 Thioesterase_II_repeat1 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=80.29 E-value=12 Score=29.37 Aligned_cols=57 Identities=7% Similarity=-0.088 Sum_probs=45.7
Q ss_pred EEEEEeeeeeeeccCCCCCEEEEEEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEE
Q 022145 159 IWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (302)
Q Consensus 159 ~wVV~r~~i~~~r~p~~gD~I~I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (302)
.-.-..+.+.|+.++...|-+..+.+....+.-+..-+=.|++ ++|+++|.+....+
T Consensus 47 ~~aSldhsi~Fh~~~~~~~W~l~~~~~~~~~~gr~~~~~~l~~-~~G~LvAs~~Q~~l 103 (104)
T cd03444 47 ASASLDHAIWFHRPFRADDWLLYEQRSPRAGNGRGLVEGRIFT-RDGELVASVAQEGL 103 (104)
T ss_pred ceEeeeEEEEEeCCCCCCceEEEEEECccccCCeeEEEEEEEC-CCCCEEEEEEEeee
Confidence 3455678999999999999999999998877666666678887 79999999876543
No 64
>COG2030 MaoC Acyl dehydratase [Lipid metabolism]
Probab=78.20 E-value=17 Score=30.87 Aligned_cols=59 Identities=10% Similarity=-0.031 Sum_probs=42.4
Q ss_pred EEEEEeeeeeeeccCCCCCEEEEEEEEeeeC--C--ceEEEEEEEEEcCCCcEEEEEEEEEEEE
Q 022145 159 IWVVSRMQVEIDHYPIWGEVVEIDTWVGASG--K--NGMRRDWLIRSQATGHIFARATSTWVMM 218 (302)
Q Consensus 159 ~wVV~r~~i~~~r~p~~gD~I~I~Twv~~~g--~--~~~~R~f~I~d~~~Gelia~a~s~wV~v 218 (302)
+-.+.-..++|.+|.+.||+|+.++++.... + -......+.++ +.|++...+...+++.
T Consensus 93 ~~~~g~~~vRF~~PV~~Gdtl~~~~~v~~~~~~~~~G~v~~~~~~~~-~~g~~v~~~~~~~~~~ 155 (159)
T COG2030 93 GANLGGDEVRFVKPVFPGDTLRARVEVLDKRPSKSRGLVTLRLETVN-QEGELVLTLEATVLVL 155 (159)
T ss_pred eeeccccceEecCCCCCCCEEEEEEEEEEeeecCCceEEEEEEEEEc-cCCcEEEEEEEeEeEe
Confidence 4455667899999999999999999997542 1 12223345554 7888888888777654
No 65
>cd01289 FabA_like Domain of unknown function, appears to be related to a diverse group of beta-hydroxydecanoyl ACP dehydratases (FabA) and beta-hydroxyacyl ACP dehydratases (FabZ). This group appears to lack the conserved active site histidine of FabA and FabZ.
Probab=75.74 E-value=44 Score=27.57 Aligned_cols=102 Identities=11% Similarity=-0.063 Sum_probs=63.7
Q ss_pred EEEEEeeeCC--CC-CCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCC-CCEE
Q 022145 104 RQTVVVRSYE--VG-PDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIW-GEVV 179 (302)
Q Consensus 104 ~~~~~Vr~~D--~D-~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~-gD~I 179 (302)
.....|...+ .+ .++.+.-..+++++-+++..+.- .. ... .-.+...+..+.=-+++|+++..- ||++
T Consensus 28 ~~~~~v~~~~~f~~~~~~~~P~~l~iE~mAQa~a~~~g---~~----~~~-~~~~~~~g~l~~i~~~~f~~~v~p~Gd~l 99 (138)
T cd01289 28 HCRATVHPDPLFPLRAHGRLPAWVGIEYMAQAIAAHGG---LL----ARQ-QGNPPRPGFLLGSRKYEAHVDRFDLGSTL 99 (138)
T ss_pred EEEEEeCCCCcCccccCCCcchHHHHHHHHHHHHHHHH---HH----HHh-cCCCCCcEEEEEEEEEEEEcceeCCCCee
Confidence 3444454433 22 23678889999999998776631 00 000 001223455555568999998655 9999
Q ss_pred EEEEEEeeeCC-ceEEEEEEEEEcCCCcEEEEEEEEE
Q 022145 180 EIDTWVGASGK-NGMRRDWLIRSQATGHIFARATSTW 215 (302)
Q Consensus 180 ~I~Twv~~~g~-~~~~R~f~I~d~~~Gelia~a~s~w 215 (302)
+|+........ .....+-.++ .+|+++|+|+...
T Consensus 100 ~i~~~~~~~~~~~~~~~~~~~~--v~~~~va~a~l~~ 134 (138)
T cd01289 100 LIVVAELLQGDSGLGVFECTIE--DQGGVLASGRLNV 134 (138)
T ss_pred EEEeeeeeeCCCcEEEEEEEEE--ECCEEEEEEEEEE
Confidence 99988766553 4445555666 4789999997653
No 66
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=75.72 E-value=10 Score=34.65 Aligned_cols=53 Identities=8% Similarity=-0.070 Sum_probs=46.9
Q ss_pred EEeeeeeeeccCCCCCEEEEEEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEE
Q 022145 162 VSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (302)
Q Consensus 162 V~r~~i~~~r~p~~gD~I~I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (302)
+..+++.|.+++..+..|+++++...-||.+..|.-+++ ++|++++++...+.
T Consensus 46 ~~S~h~~Fl~~~~~~~pv~~~V~~lR~GRs~~~r~V~~~--Q~g~~~~~a~asf~ 98 (271)
T TIGR00189 46 PHSLHSYFVRAGDPKKPIIYDVERLRDGRSFITRRVKAV--QHGKTIFTLQASFQ 98 (271)
T ss_pred cceeEEEecCCCCCCCCEEEEEEEeeCCCceEEEEEEEE--ECCEEEEEEEEEcc
Confidence 447999999999999999999999999999999988888 58999998877655
No 67
>PF03756 AfsA: A-factor biosynthesis hotdog domain; InterPro: IPR005509 The AfsA family are key enzymes in A-factor biosynthesis, which is essential for streptomycin production and resistance. This domain is distantly related to the thioester dehydratase FabZ family and therefore has a Hotdog domain [].
Probab=73.59 E-value=47 Score=26.89 Aligned_cols=59 Identities=12% Similarity=0.288 Sum_probs=45.0
Q ss_pred CeEEEEEeeeeeeeccCCCCCEEEEEEEEeeeCC-----ceEEEEEEEEEcCCCcEEEEEEEEEEE
Q 022145 157 NLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGK-----NGMRRDWLIRSQATGHIFARATSTWVM 217 (302)
Q Consensus 157 g~~wVV~r~~i~~~r~p~~gD~I~I~Twv~~~g~-----~~~~R~f~I~d~~~Gelia~a~s~wV~ 217 (302)
+..+++..++++|.++..+.-.+.|+..+..... ..+.....|+ ++|+++++++..+-|
T Consensus 69 ~~~~~~~~l~~~f~~~~e~~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~--q~g~~~a~~~~~~tc 132 (132)
T PF03756_consen 69 DHQFVLTSLDFTFSRFAELDVPADLTVRITCRDRRGGRPRGLRFRVTVS--QGGRVVATASMTFTC 132 (132)
T ss_pred CceEEEEEEEEEEccccccCCCEEEEEEEEeccccCCccceEEEEEEEE--ECCEEEEEEEEEEEC
Confidence 4568999999999999888888888877654222 3556667777 599999999988753
No 68
>cd03448 HDE_HSD HDE_HSD The R-hydratase-like hot dog fold of the 17-beta-hydroxysteriod dehydrogenase (HSD), and Hydratase-Dehydrogenase-Epimerase (HDE) proteins. Other enzymes with this fold include MaoC dehydratase, and the fatty acid synthase beta subunit.
Probab=71.11 E-value=24 Score=28.61 Aligned_cols=48 Identities=10% Similarity=0.178 Sum_probs=32.2
Q ss_pred EEEEeeeeeeeccCCCCCEEEEEEEEeeeCCceEEEEEEEEEcCCCcEEEEEE
Q 022145 160 WVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARAT 212 (302)
Q Consensus 160 wVV~r~~i~~~r~p~~gD~I~I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~ 212 (302)
-.+....++|.+|...||+|+++.|.. ++ ... +.+...++|+++.++.
T Consensus 70 ~~~~~~~~rF~~PV~~gDtl~~~~~~~--~~-~v~--~~~~~~~~g~~v~~g~ 117 (122)
T cd03448 70 ARFKAIKVRFSSPVFPGETLRTEMWKE--GN-RVI--FQTKVVERDVVVLSNG 117 (122)
T ss_pred ceeEEEEEEEcCCccCCCEEEEEEEEe--CC-EEE--EEEEEccCCcEEEECC
Confidence 345567999999999999999999853 33 333 3333324667655543
No 69
>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]
Probab=69.96 E-value=66 Score=30.45 Aligned_cols=106 Identities=14% Similarity=0.167 Sum_probs=70.3
Q ss_pred EEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEEEE
Q 022145 104 RQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDT 183 (302)
Q Consensus 104 ~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I~T 183 (302)
.+.+.||...-=++-..-+..+|.|+.+--.-... +...|.+ +...+..-+=..+.+-|+||.+.+|-|.-.+
T Consensus 177 ~~~vWira~~~~pdd~~~~~~lLay~SD~~ll~ta---l~~Hg~~----~~~~~~~~aSLDHs~wFhrp~~~ddWlLy~~ 249 (289)
T COG1946 177 QQQVWIRARGELPDDPRLHQALLAYLSDFTLLDTA---LQPHGLG----FLTPGIQVASLDHSMWFHRPFRLDDWLLYAQ 249 (289)
T ss_pred ceeEEEEcCCCCCCCHHHHHHHHHHhccchhhhhh---hccCCCc----cccCcceEeeccceEEEeccccCCCEEEEEe
Confidence 45566777666666667777778888775322211 1111222 2245666667788999999999999999888
Q ss_pred EEeee-CCceEEEEEEEEEcCCCcEEEEEEEEEEEE
Q 022145 184 WVGAS-GKNGMRRDWLIRSQATGHIFARATSTWVMM 218 (302)
Q Consensus 184 wv~~~-g~~~~~R~f~I~d~~~Gelia~a~s~wV~v 218 (302)
..... +...+.|. .|++ ++|+++|......++-
T Consensus 250 ~sp~A~~~rgl~~G-~lf~-r~G~LiA~~~QEG~~r 283 (289)
T COG1946 250 ESPSASGGRGLVRG-QLFD-RDGQLIASVVQEGLIR 283 (289)
T ss_pred eCCcccCCcceeee-EEEc-CCCCEEEEEeeeEEEe
Confidence 77544 44455553 5665 7999999987776654
No 70
>PF02551 Acyl_CoA_thio: Acyl-CoA thioesterase; InterPro: IPR003703 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH). They consequently have the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. They may also be involved in the metabolic regulation of peroxisome proliferation. Thioesters play a central role in cells as they participate in metabolism, membrane synthesis, signal transduction, and gene regulation. Thioesterases catalyse the hydrolysis of thioesters to the thiol and carboxylic acid components. Many thioesterases have a hot dog fold, including YciA from Escherichia coli and its close sequence homologue HI0827 from Haemophilus influenzae (HiYciA) []. In Helicobacter pylori, YbgC also belongs to the hot-dog family of proteins, with a epsilongamma tetrameric arrangement []. YbgC proteins are bacterial acyl-CoA thioesterases associated with the Tol-Pal system. This system is important for cell envelope integrity and is part of the cell division machinery. However, the E. coli thioesterase II reveals a new tertiary fold: a 'double hot dog'. It has an internal repeat with a basic unit that is structurally similar to the recently described beta-hydroxydecanoyl thiol ester dehydrase []. ; GO: 0016291 acyl-CoA thioesterase activity, 0006637 acyl-CoA metabolic process; PDB: 1C8U_B 1TBU_B 3U0A_B.
Probab=68.91 E-value=33 Score=28.66 Aligned_cols=100 Identities=17% Similarity=0.105 Sum_probs=54.7
Q ss_pred EEEEeeeCCCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCCEEEEEEE
Q 022145 105 QTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTW 184 (302)
Q Consensus 105 ~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD~I~I~Tw 184 (302)
..+-+|-.+.=++...-+..++.|+.|.- ++.-.+. .+.+...++.- -..+.|=|+||++.+|-|.-.+.
T Consensus 30 ~~vW~ra~~~~p~d~~~h~~~laY~SD~~--------~L~tal~-~H~~~~~~~~v-SlDHs~wFHrpfr~ddWlLY~~~ 99 (131)
T PF02551_consen 30 QQVWVRANGILPDDPRIHSCALAYASDFT--------LLDTALQ-PHGFGFPKFQV-SLDHSMWFHRPFRADDWLLYAIE 99 (131)
T ss_dssp ECCCCCCCSTS-TTHCCCCCHHHHHCCCC--------CGGGGGC-CGCCCCCCEEE-EEEEEEEE-S--BTTS-EEEEEE
T ss_pred hhhhHHhCCCCCCchhHhHHHHHHHhHHh--------HHHhhhc-cccccccccEE-ecceeEEEcCCCCCCCCEEEEEE
Confidence 34445555555555555666677766631 1110110 01122333444 77788999999999999988887
Q ss_pred Eee-eCCceEEEEEEEEEcCCCcEEEEEEEEE
Q 022145 185 VGA-SGKNGMRRDWLIRSQATGHIFARATSTW 215 (302)
Q Consensus 185 v~~-~g~~~~~R~f~I~d~~~Gelia~a~s~w 215 (302)
... .+...+.+ =.+++.++|+++|.+....
T Consensus 100 sp~A~~~Rgl~~-G~~f~~q~G~Lvas~~QEG 130 (131)
T PF02551_consen 100 SPSASGGRGLVR-GRFFDTQDGELVASVVQEG 130 (131)
T ss_dssp EEEEETTEEEEE-ECCEEECTTEEEEEEEEEE
T ss_pred cCccccCccccc-CceEecCCCCEEEEEecCC
Confidence 744 44444443 4555237999999987654
No 71
>PF07977 FabA: FabA-like domain; InterPro: IPR013114 Fatty acids biosynthesis occurs by two distinct pathways: in fungi, mammals and mycobacteria, type I or associative fatty-acid biosynthesis (type I FAS) is accomplished by multifunctional proteins in which distinct domains catalyse specific reactions; in plants and most bacteria, type II or dissociative fatty-acid biosynthesis (type II FAS) is accomplished by distinct enzymes []. Both FabZ and FabA catalyse the dehydration of beta-hydroxyacyl acyl carrier protein (ACP) to trans 2-enoyl ACP. However, FabZ and FabA display subtle differences in substrate specificities, whereby FabA is most effective on acyl ACPs of 9-11 carbon atoms in length, while FabZ is less specific. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains. This enzyme domain has a HotDog fold.; PDB: 3D6X_F 2GLV_J 2GLM_E 2GLP_E 2GLL_C 1U1Z_F 3ESI_A 3AZB_T 3AZA_M 3AZ9_U ....
Probab=68.52 E-value=63 Score=26.29 Aligned_cols=88 Identities=13% Similarity=0.029 Sum_probs=53.9
Q ss_pred CCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCCeEEEEEeeeeeeeccCCCCC-EEEEEEEEee---eCCce
Q 022145 117 DKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGE-VVEIDTWVGA---SGKNG 192 (302)
Q Consensus 117 ~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g~~wVV~r~~i~~~r~p~~gD-~I~I~Twv~~---~g~~~ 192 (302)
+..+--.-+++.+-+++..++... +.... .-......+...--+++|.++..-|| .++++..+.+ .+...
T Consensus 47 ~Pv~PGvl~iE~~aQ~~~~~~~~~-----~~~~~-~~~~~~~~~l~~~~~~kF~~~v~Pg~~~l~~~v~i~~~~~~~~~~ 120 (138)
T PF07977_consen 47 DPVMPGVLLIEAMAQAAGFLAGYS-----GLAEG-TGEARKVPFLAGIRNVKFRGPVYPGDKTLRIEVEIKKIRRREGGM 120 (138)
T ss_dssp S--B-HHHHHHHHHHHHHHHHHHH-----CCSSS-CCCCCEEEEEEEEEEEEE-S-B-TTE-EEEEEEEEEEEEEEETTE
T ss_pred CCCCCeEhHHHHHHHHHHhHhhhc-----ccccc-CCCcceEEEeccccEEEECccEeCCCcEEEEEEEEEEeecccCCE
Confidence 344555567777777776664311 11000 00011345666678999999999999 9999999888 55666
Q ss_pred EEEEEEEEEcCCCcEEEEEE
Q 022145 193 MRRDWLIRSQATGHIFARAT 212 (302)
Q Consensus 193 ~~R~f~I~d~~~Gelia~a~ 212 (302)
...+..++. +|+.++++.
T Consensus 121 ~~~~~~~~v--dg~~v~~~~ 138 (138)
T PF07977_consen 121 AIFDGTAYV--DGELVAEAE 138 (138)
T ss_dssp EEEEEEEEE--TTEEEEEEE
T ss_pred EEEEEEEEE--CCEEEEEEC
Confidence 677778874 899998874
No 72
>COG0764 FabA 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]
Probab=67.71 E-value=76 Score=26.92 Aligned_cols=60 Identities=12% Similarity=0.096 Sum_probs=45.6
Q ss_pred eEEEEEeeeeeeeccCCCCCEEEEEEEEeeeCCc-eEEEEEEEEEcCCCcEEEEEEEEEEEEe
Q 022145 158 LIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKN-GMRRDWLIRSQATGHIFARATSTWVMMN 219 (302)
Q Consensus 158 ~~wVV~r~~i~~~r~p~~gD~I~I~Twv~~~g~~-~~~R~f~I~d~~~Gelia~a~s~wV~vD 219 (302)
....+.=-+++|+++..-||.+.++......+.. .....-+.. -+|+++++|+...+.++
T Consensus 85 ~~~~~gid~~kF~~~V~PGd~l~l~~~~~~~~~~~~~~~~~~a~--Vdg~~v~~a~~~~~~~~ 145 (147)
T COG0764 85 LGYFLGIDNAKFKRPVLPGDQLELEVKLLKSRRLGIGKAKGVAT--VDGKVVAEAELLFAGVE 145 (147)
T ss_pred EEEEEEecceeecCccCCCCEEEEEEEEEEecccceEEEEEEEE--ECCEEEEEEEEEEEEee
Confidence 5566666789999999999999999998887733 333333333 58999999998887765
No 73
>PF01575 MaoC_dehydratas: MaoC like domain; InterPro: IPR002539 The C terminus of the MaoC protein is found to share similarity with a wide variety of enzymes. All these enzymes contain multiple domains. This domain is found in parts of two enzymes that have been assigned dehydratase activities. A deletion mutant of the C-terminal 271 amino acids in Q02207 from SWISSPROT abolished its 2-enoyl-CoA hydratase activity, suggesting that this region may be a hydratase enzyme []. The maoC gene is part of a operon with maoA which is involved in the synthesis of monoamine oxidase [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1PN4_C 1PN2_B 1S9C_K 3OML_A 1Q6W_B 2B3M_A 3K67_B ....
Probab=66.67 E-value=13 Score=29.83 Aligned_cols=33 Identities=12% Similarity=0.050 Sum_probs=26.4
Q ss_pred eEEEEEeeeeeeeccCCCCCEEEEEEEEeeeCC
Q 022145 158 LIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGK 190 (302)
Q Consensus 158 ~~wVV~r~~i~~~r~p~~gD~I~I~Twv~~~g~ 190 (302)
....+.+.+++|.+|.+.||+|.++.++.+...
T Consensus 74 ~~~~~~~~~~rF~~PV~~gdtl~~~~~v~~~~~ 106 (122)
T PF01575_consen 74 PPARLGRFNVRFRAPVFPGDTLTAEVEVTEKRE 106 (122)
T ss_dssp ECEEEEEEEEEESS--BTTEEEEEEEEEEEEEE
T ss_pred cceEEEEEEEEEeccccCCCEEEEEEEEEEEEE
Confidence 357788899999999999999999999987433
No 74
>cd03450 NodN NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.
Probab=65.51 E-value=71 Score=26.84 Aligned_cols=30 Identities=10% Similarity=-0.273 Sum_probs=24.4
Q ss_pred EEEEEeeeeeeeccCCCCCEEEEEEEEeee
Q 022145 159 IWVVSRMQVEIDHYPIWGEVVEIDTWVGAS 188 (302)
Q Consensus 159 ~wVV~r~~i~~~r~p~~gD~I~I~Twv~~~ 188 (302)
++.+...+++|.+|.+.||+|+++..+...
T Consensus 84 ~~~~g~~~~rF~~PV~~GDtl~~~~~V~~~ 113 (149)
T cd03450 84 GVNYGLDKVRFPAPVPVGSRVRGRFTLLSV 113 (149)
T ss_pred EEEeeccEEEeCcceeCCcEEEEEEEEEEE
Confidence 344455689999999999999999988653
No 75
>cd01287 FabA FabA, beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase: Bacterial protein of the type II, fatty acid synthase system that binds ACP and catalyzes both dehydration and isomerization reactions, apparently in the same active site. The FabA structure is a homodimer with two independent active sites located at the dimer interface. Each active site is tunnel-shaped and completely inaccessible to solvent. No metal ions or cofactors are required for ligand binding or catalysis.
Probab=65.22 E-value=65 Score=27.23 Aligned_cols=93 Identities=12% Similarity=-0.053 Sum_probs=58.2
Q ss_pred CCCcCHHHHHHHHHHHHHHhHHhhccccCCCCccccccc-CCeEEEEEeeeeeeeccCCCCC-EEEEEEEEeeeCC----
Q 022145 117 DKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMR-NNLIWVVSRMQVEIDHYPIWGE-VVEIDTWVGASGK---- 190 (302)
Q Consensus 117 ~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~-~g~~wVV~r~~i~~~r~p~~gD-~I~I~Twv~~~g~---- 190 (302)
+..+--.-.++.|-++...++-. .+... .-.. ...+....--.++|+++..-|| +++++..+.+.+.
T Consensus 49 ~pvmPG~L~iEamaQ~~~~~~~~-----~~~~~--~~~~~~~~~~l~~~~~~kfr~~v~Pgd~~l~~e~~i~~~~~~~~~ 121 (150)
T cd01287 49 DPVMPGSLGLEAMIQLLQFYLIW-----LGLGT--GVDNPRFQGAPGGPGEWKYRGQITPHNKKVTYEVHIKEVGRDGPR 121 (150)
T ss_pred CCcCchHHHHHHHHHHHHHHHhh-----ccccc--ccCcccceeEeccceEEEECccCcCCCEEEEEEEEEEEEEccCCc
Confidence 44455566677777765554310 11100 0001 1234445556899999999999 8999999988763
Q ss_pred ceEEEEEEEEEcCCCcEEEEEEEEEEEE
Q 022145 191 NGMRRDWLIRSQATGHIFARATSTWVMM 218 (302)
Q Consensus 191 ~~~~R~f~I~d~~~Gelia~a~s~wV~v 218 (302)
....-+-.++ .+|+++++++..-|.+
T Consensus 122 ~~~~~~~~~~--vdg~~v~~a~~~~~~~ 147 (150)
T cd01287 122 PYIIADASLW--VDGLRIYEAKDIAVRL 147 (150)
T ss_pred cEEEEEEEEE--ECCEEEEEEEccEEEe
Confidence 4455555666 4899999998765544
No 76
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=65.13 E-value=26 Score=32.72 Aligned_cols=55 Identities=11% Similarity=-0.064 Sum_probs=48.4
Q ss_pred EEEEeeeeeeeccCCCCCEEEEEEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEE
Q 022145 160 WVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (302)
Q Consensus 160 wVV~r~~i~~~r~p~~gD~I~I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (302)
.++..+++-|.+|...+..|+.++....-||.+..|.-..+ ++|++++.+...+-
T Consensus 55 ~~~hSlh~~Fl~pg~~~~pi~y~Ve~lRdGRSfstr~V~a~--Q~g~~if~~~~sF~ 109 (286)
T PRK10526 55 RLVHSFHSYFLRPGDSQKPIIYDVETLRDGNSFSARRVAAI--QNGKPIFYMTASFQ 109 (286)
T ss_pred CCceEEEEEcCCCCCCCCCEEEEEEEEeCCCceEeEEEEEE--ECCEEEEEEEEEec
Confidence 36778999999999999999999999999999999988888 58999988877654
No 77
>KOG4366 consensus Predicted thioesterase [General function prediction only]
Probab=63.65 E-value=1.9 Score=38.06 Aligned_cols=18 Identities=44% Similarity=0.698 Sum_probs=15.7
Q ss_pred CCCCCcccC-CCchHHHHH
Q 022145 271 KRSDLDMNH-HVNNVKYVR 288 (302)
Q Consensus 271 r~sDLD~Ng-HVNN~~Yl~ 288 (302)
--+|+|.-- ||||++|++
T Consensus 58 ls~dlDtll~HmnNArYfr 76 (213)
T KOG4366|consen 58 LSTDLDTLLSHMNNARYFR 76 (213)
T ss_pred ecchHHHHHHHhhhhHHHH
Confidence 349999987 999999986
No 78
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=60.30 E-value=29 Score=36.59 Aligned_cols=49 Identities=10% Similarity=0.055 Sum_probs=38.7
Q ss_pred eeeeeccCCCCCEEEEEEEEeeeC--C----ceEEEEEEEEEcCCCcEEEEEEEEE
Q 022145 166 QVEIDHYPIWGEVVEIDTWVGASG--K----NGMRRDWLIRSQATGHIFARATSTW 215 (302)
Q Consensus 166 ~i~~~r~p~~gD~I~I~Twv~~~g--~----~~~~R~f~I~d~~~Gelia~a~s~w 215 (302)
+++|.+|.+.||+|+++..+.... + ..+..+.++.+ ++|+++.++....
T Consensus 617 ~~rF~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~n-q~G~~V~~~~~~~ 671 (675)
T PRK11563 617 NLRFLTPVKPGDTIQVRLTCKRKTPRRQAPYGVVRWDVEVTN-QDGELVATYDILT 671 (675)
T ss_pred eEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEEE-CCCCEEEEEEEHH
Confidence 799999999999999999997652 1 23566777887 7899988886543
No 79
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=59.86 E-value=28 Score=36.66 Aligned_cols=50 Identities=8% Similarity=-0.082 Sum_probs=38.7
Q ss_pred eeeeeeccCCCCCEEEEEEEEeeeC--C---c-eEEEEEEEEEcCCCcEEEEEEEEE
Q 022145 165 MQVEIDHYPIWGEVVEIDTWVGASG--K---N-GMRRDWLIRSQATGHIFARATSTW 215 (302)
Q Consensus 165 ~~i~~~r~p~~gD~I~I~Twv~~~g--~---~-~~~R~f~I~d~~~Gelia~a~s~w 215 (302)
.+++|.+|.+.||+|+++..+.... + . .+..+..+++ ++|+++.++....
T Consensus 604 ~~~rF~~PV~~GDtl~~~~~V~e~~~~~~~~~g~v~~~~~v~n-q~G~~Vl~~~~~~ 659 (663)
T TIGR02278 604 ENLRFLEPVGPGDTIQVRLTVKRKTPRDEKTYGVVEWAAEVVN-QNGEPVATYDVLT 659 (663)
T ss_pred ceEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEEc-CCCCEEEEEEEHH
Confidence 4899999999999999999986542 1 1 3556677776 7899988887644
No 80
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=56.51 E-value=1.6e+02 Score=26.78 Aligned_cols=55 Identities=5% Similarity=-0.135 Sum_probs=41.7
Q ss_pred EEEeeeeeeeccCCCCCEEEEEEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEE
Q 022145 161 VVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (302)
Q Consensus 161 VV~r~~i~~~r~p~~gD~I~I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (302)
.-..+.+.|+++...+|-+..+++....+.-+..-.=.|++ ++|+++|.+...-+
T Consensus 215 aSldhtv~fh~~~~~~~W~l~~~~s~~~~~Grg~~~~~l~d-~~G~lvAs~~Qe~l 269 (271)
T TIGR00189 215 ASLDHSIWFHRPFRADDWLLYKCSSPSASGSRGLVEGKIFT-RDGVLIASTVQEGL 269 (271)
T ss_pred EeeeeeEEEeCCCCCCeeEEEEEEeccccCCceEEEEEEEC-CCCCEEEEEEeeee
Confidence 45668888999878999999999887654443333457887 89999999876644
No 81
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=56.25 E-value=1e+02 Score=27.47 Aligned_cols=54 Identities=7% Similarity=0.012 Sum_probs=40.0
Q ss_pred EEeeeeeeec-cCCCCCEEEEEEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEE
Q 022145 162 VSRMQVEIDH-YPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (302)
Q Consensus 162 V~r~~i~~~r-~p~~gD~I~I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (302)
-..+.|.|++ |..-+|-+.++++....+.-.+.-+-+|++ ++|+++|.+....+
T Consensus 200 tld~ti~f~~~p~~~~~Wl~~~~~~~~~~~Gr~~~~~~l~d-~~G~lvA~~~Q~~l 254 (255)
T PF13622_consen 200 TLDHTIHFHRLPFDGDEWLLLEARSPRAGNGRALMEGRLWD-EDGRLVASSRQEAL 254 (255)
T ss_dssp EEEEEEEECSHCCTTTS-EEEEEEEEEEETTEEEEEEEEEE-TTS-EEEEEEEEEE
T ss_pred cceeEEEEEeCCccCCceEEEEEEEeEeCCCEEEEEEEEEC-CCCCEEEEEEEEee
Confidence 6677888754 555689999999887776666666678998 89999999977654
No 82
>PLN02864 enoyl-CoA hydratase
Probab=52.69 E-value=86 Score=29.76 Aligned_cols=51 Identities=10% Similarity=0.102 Sum_probs=35.8
Q ss_pred EEEEeeeeeeeccCCCCCEEEEEEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEE
Q 022145 160 WVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTW 215 (302)
Q Consensus 160 wVV~r~~i~~~r~p~~gD~I~I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~w 215 (302)
..+.+++++|.+|...||+|.++.|.. ++ ... |.+...++|+++..|....
T Consensus 253 ~~~~~~~~rF~~PV~pGdtl~~~~~~~--~~-~v~--~~~~~~~~g~~vl~G~a~~ 303 (310)
T PLN02864 253 TAVKTISGRFLLHVYPGETLVTEMWLE--GL-RVI--YQTKVKERNKAVLSGYVDL 303 (310)
T ss_pred ceEEEEEEEEcCCccCCCEEEEEEEeC--CC-EEE--EEEEEecCCeEEEEEEEEE
Confidence 356778999999999999999999864 22 232 3333236788877776554
No 83
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=52.59 E-value=72 Score=29.75 Aligned_cols=60 Identities=8% Similarity=-0.124 Sum_probs=44.8
Q ss_pred eEEEEEeeeeeeeccCCCCCEEEEEEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEEEE
Q 022145 158 LIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWVMM 218 (302)
Q Consensus 158 ~~wVV~r~~i~~~r~p~~gD~I~I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV~v 218 (302)
..-.-..+.|.|+++++.+|-+..+++....+.-+..-.=.|++ ++|+++|.+....++-
T Consensus 224 ~~~aSLdhsi~Fh~~~~~d~W~L~~~~s~~a~~gr~~~~g~i~~-~~G~LvAs~~Qegl~r 283 (286)
T PRK10526 224 MQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYT-QDGVLVASTVQEGVMR 283 (286)
T ss_pred ceEEeeeEeEEEeCCCCCCceEEEEEECCcccCCceEEEEEEEC-CCCCEEEEEEeeEEEE
Confidence 33456678899999999999999999986554333222347886 8999999998776653
No 84
>PRK13693 (3R)-hydroxyacyl-ACP dehydratase subunit HadB; Provisional
Probab=46.63 E-value=1.7e+02 Score=24.24 Aligned_cols=51 Identities=12% Similarity=0.117 Sum_probs=34.1
Q ss_pred EeeeeeeeccCCCC-C----EEEEEEEEeee--CCceEEEEEEEEEcCCCcEEEEEEEE
Q 022145 163 SRMQVEIDHYPIWG-E----VVEIDTWVGAS--GKNGMRRDWLIRSQATGHIFARATST 214 (302)
Q Consensus 163 ~r~~i~~~r~p~~g-D----~I~I~Twv~~~--g~~~~~R~f~I~d~~~Gelia~a~s~ 214 (302)
.++.++|.+|.+.| | +|+++..+... ++........+.+ ++++++.+|..+
T Consensus 81 ~~~~~rF~~pv~~g~D~~~~~l~~~~~V~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~ 138 (142)
T PRK13693 81 TEYNVRFTAVVPVPNDGKGAELVFNGRVKSVDPESKSVTIALTATT-GGKKIFGRAIAS 138 (142)
T ss_pred EEEEEEecccEECCCCccceEEEEEEEEEEeccCCcEEEEEEEEEE-CCcEEEEEEEEE
Confidence 46799999999875 3 88888888765 3334555566664 455556665544
No 85
>PLN02868 acyl-CoA thioesterase family protein
Probab=41.37 E-value=78 Score=31.03 Aligned_cols=54 Identities=9% Similarity=-0.071 Sum_probs=45.4
Q ss_pred EEEeeeeeeeccCCCCCEEEEEEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEE
Q 022145 161 VVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (302)
Q Consensus 161 VV~r~~i~~~r~p~~gD~I~I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (302)
.+..+++.|.++...+..|++++....-||.+..|.-..+ ++|++++.+...+.
T Consensus 182 ~~~s~~~~Fl~~~~~~~pv~~~V~~lr~Grs~~~r~v~~~--Q~g~~~~~~~~sf~ 235 (413)
T PLN02868 182 LVHSLHAYFLLVGDINLPIIYQVERIRDGHNFATRRVDAI--QKGKVIFTLFASFQ 235 (413)
T ss_pred CceEeeeeecCCCCCCCCEEEEEEEEcCCCceEeeEEEEE--ECCeeEEEEeeccc
Confidence 3567889999999888899999999999999999988887 57898887776544
No 86
>PF09500 YiiD_Cterm: Putative thioesterase (yiiD_Cterm); InterPro: IPR012660 This entry consists of a broadly distributed uncharacterised domain found often as a standalone protein. The member from is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an N-terminal acetyltransferase domain (IPR000182 from INTERPRO). The function of these proteins are unknown. ; PDB: 1T82_C.
Probab=35.65 E-value=2.7e+02 Score=23.48 Aligned_cols=90 Identities=16% Similarity=0.172 Sum_probs=53.8
Q ss_pred CCCCCCCcCHHHHHHHHHHHHHHhHHhhccccCCCCcccccccCC--eEEEEEeeeeeeeccCCCCCEEEEEEEEe----
Q 022145 113 EVGPDKTATLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNN--LIWVVSRMQVEIDHYPIWGEVVEIDTWVG---- 186 (302)
Q Consensus 113 D~D~~G~v~~~~yl~~~qeAa~~h~~~~~~~~~G~g~~~~l~~~g--~~wVV~r~~i~~~r~p~~gD~I~I~Twv~---- 186 (302)
-++..|.++-.++...+--+.+...+. .+.+.| --.||.+.+++|.+|.. +| ++..+...
T Consensus 39 N~N~~~T~FgGSl~slatLaGW~lv~l------------~l~e~~~~~~IVi~~~~i~Y~~Pv~-~d-~~A~~~~~~~~~ 104 (144)
T PF09500_consen 39 NINHHGTMFGGSLYSLATLAGWGLVWL------------QLKEAGLNGDIVIADSNIRYLKPVT-GD-FTARCSLPEPED 104 (144)
T ss_dssp GB-TTSSB-HHHHHHHHHHHHHHHHHH------------HHHHHT---EEEEEEEEEEE-S----S---EEEEE------
T ss_pred CcCCCCCcchHHHHHHHHHHHHHHHHH------------HHHHhCCCCcEEEEeCceEEcCCCC-CC-cEEEEeccccch
Confidence 466778888888888877766554431 122222 57899999999999985 44 33333332
Q ss_pred ---------eeCCceEEEEEEEEEcCCCcEEEEEEEEEEEE
Q 022145 187 ---------ASGKNGMRRDWLIRSQATGHIFARATSTWVMM 218 (302)
Q Consensus 187 ---------~~g~~~~~R~f~I~d~~~Gelia~a~s~wV~v 218 (302)
.-||.++...-.|++ +|+.+++.+..+|.+
T Consensus 105 ~~~~~~~l~~~grari~l~~~i~~--~~~~~a~f~G~yv~l 143 (144)
T PF09500_consen 105 WERFLQTLARGGRARITLEVEIYS--GGELAAEFTGRYVAL 143 (144)
T ss_dssp -S---GGGGCTS-EEEEEEEEEEE--TTEEEEEEEEEEEEE
T ss_pred hHHHHHHHHcCCcEEEEEEEEEEE--CCEEEEEEEEEEEEE
Confidence 224556677778885 888999999888865
No 87
>PLN02868 acyl-CoA thioesterase family protein
Probab=33.27 E-value=1.2e+02 Score=29.73 Aligned_cols=55 Identities=5% Similarity=-0.158 Sum_probs=42.2
Q ss_pred EEEeeeeeeeccCCCCCEEEEEEEEeeeCCceEEEEEEEEEcCCCcEEEEEEEEEE
Q 022145 161 VVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIFARATSTWV 216 (302)
Q Consensus 161 VV~r~~i~~~r~p~~gD~I~I~Twv~~~g~~~~~R~f~I~d~~~Gelia~a~s~wV 216 (302)
.-..+.|.|+++++.+|-+..+++....+.-+..-.=.|++ ++|+++|.+....+
T Consensus 358 aSLdhsi~Fh~~~~~d~W~l~~~~s~~a~~gr~~~~g~l~~-~~G~LvAs~~Qe~l 412 (413)
T PLN02868 358 LSLDHSMWFHRPFRADDWLLFVIVSPAAHNGRGFATGHMFN-RKGELVVSLTQEAL 412 (413)
T ss_pred EEcceeEEEecCCCCCceEEEEEECCccCCCcceEEEEEEC-CCCCEEEEEEeeec
Confidence 34458999999999999999999987765444434457886 89999999876543
No 88
>PF11456 DUF3019: Protein of unknown function (DUF3019); InterPro: IPR021559 This is a bacterial family of uncharacterised proteins.
Probab=31.32 E-value=1.4e+02 Score=23.67 Aligned_cols=34 Identities=21% Similarity=0.373 Sum_probs=25.1
Q ss_pred EEEEEEcCCCcEEEEEEEEEEEEecCCCccccCC
Q 022145 196 DWLIRSQATGHIFARATSTWVMMNQQTRRLSKIP 229 (302)
Q Consensus 196 ~f~I~d~~~Gelia~a~s~wV~vD~~tRRpvriP 229 (302)
.|.+++..++..+|.+......+..++||-.|-|
T Consensus 66 ~f~L~~~~~~~~la~~~v~V~~~~~k~Rrr~r~p 99 (102)
T PF11456_consen 66 QFSLRDSDTGQPLAQVKVKVTWVSPKVRRRRRNP 99 (102)
T ss_pred EEEEEeCCCCcEEEEEEEEEEEeccCcCCccCCC
Confidence 4778887788889988877777767777765543
No 89
>PHA02582 10 baseplate wedge subunit and tail pin; Provisional
Probab=23.04 E-value=1.6e+02 Score=30.36 Aligned_cols=73 Identities=10% Similarity=0.033 Sum_probs=48.3
Q ss_pred CCeEEEEEeeeeeeeccCCCCCEEEEEEEEeeeCC---ceEEEEEEEEEcCCCcEEEEEEEEEEEEecCCCccccCC
Q 022145 156 NNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGK---NGMRRDWLIRSQATGHIFARATSTWVMMNQQTRRLSKIP 229 (302)
Q Consensus 156 ~g~~wVV~r~~i~~~r~p~~gD~I~I~Twv~~~g~---~~~~R~f~I~d~~~Gelia~a~s~wV~vD~~tRRpvriP 229 (302)
.|-.-.|--..|+.+.|...||+|.|.|...++.. ...+|.-+|++ ..-.-..+.-..-..-|+.+++-..+.
T Consensus 217 ~g~l~~LdG~~Irlr~pc~~gDtv~i~ty~dgia~~RSsY~~~~i~v~d-~~~t~~~s~pG~~~v~dl~t~~~~t~~ 292 (604)
T PHA02582 217 PGELVPLDGKSIRLRQPCNAGDTVQIVTYMDGIASWRSSYNRRTIRVYD-TKLTTKTSVPGEIWVGDLSTKKSFTFA 292 (604)
T ss_pred CCceeccCCceeEeecccCCCCeEEEEEeecchhhhhhhheeeeEEEEe-cCcccccccCCcEEEeeccccccccHH
Confidence 34455566678999999999999999999987643 33467777886 232222233333344688888766543
No 90
>PRK02770 S-adenosylmethionine decarboxylase proenzyme; Provisional
Probab=22.70 E-value=2.3e+02 Score=23.76 Aligned_cols=34 Identities=12% Similarity=0.149 Sum_probs=27.9
Q ss_pred eEEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHH
Q 022145 102 GYRQTVVVRSYEVGPDKTATLESILNLFQETALN 135 (302)
Q Consensus 102 ~f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~ 135 (302)
..-..+.+..|+||.+---....+-+.+.+|+..
T Consensus 16 ~~G~Hlivdlygc~~~~L~d~~~l~~~l~~Aa~~ 49 (139)
T PRK02770 16 MVGKHCILELYDCDAEKLNDEAFLRTTLTEAAKR 49 (139)
T ss_pred ccceEEEEEEeCCChHHCCCHHHHHHHHHHHHHH
Confidence 3457788999999998888888888899888754
No 91
>PRK01706 S-adenosylmethionine decarboxylase proenzyme; Validated
Probab=20.93 E-value=3e+02 Score=22.51 Aligned_cols=33 Identities=12% Similarity=0.093 Sum_probs=26.0
Q ss_pred EEEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHH
Q 022145 103 YRQTVVVRSYEVGPDKTATLESILNLFQETALN 135 (302)
Q Consensus 103 f~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~ 135 (302)
+-..+.+..|+||...--....+-+.+.+|+..
T Consensus 6 ~G~Hli~dlygc~~~~L~d~~~l~~~l~~aa~~ 38 (123)
T PRK01706 6 FGKHIIVDLWGVDFSLLDDMYFLEHHLVEAADL 38 (123)
T ss_pred cceEEEEEEeCCChHHcCCHHHHHHHHHHHHHH
Confidence 346788999999988888888887888887654
No 92
>PRK01236 S-adenosylmethionine decarboxylase proenzyme; Provisional
Probab=20.85 E-value=3e+02 Score=22.81 Aligned_cols=32 Identities=16% Similarity=0.315 Sum_probs=26.4
Q ss_pred EEEEEeeeCCCCCCCCcCHHHHHHHHHHHHHH
Q 022145 104 RQTVVVRSYEVGPDKTATLESILNLFQETALN 135 (302)
Q Consensus 104 ~~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~ 135 (302)
-..+.+..|+||..---....+-+.+.+|+..
T Consensus 6 G~Hllvdlygc~~~~L~D~~~l~~~l~~aa~~ 37 (131)
T PRK01236 6 GLHIIADLYGVDPELIDRVEDIREILEGAVKY 37 (131)
T ss_pred ceEEEEEEeCCChHHcCCHHHHHHHHHHHHHH
Confidence 35778999999998888888888888888764
No 93
>KOG2763 consensus Acyl-CoA thioesterase [Lipid transport and metabolism]
Probab=20.69 E-value=4.2e+02 Score=25.92 Aligned_cols=72 Identities=19% Similarity=0.205 Sum_probs=48.3
Q ss_pred eEEEEEe-eeeeeeccCCCCC-EEEEEEEEeeeCCceEEEEEEEEE--cCCC--cEEEEEEEEEEEEecCCCccccCCH
Q 022145 158 LIWVVSR-MQVEIDHYPIWGE-VVEIDTWVGASGKNGMRRDWLIRS--QATG--HIFARATSTWVMMNQQTRRLSKIPA 230 (302)
Q Consensus 158 ~~wVV~r-~~i~~~r~p~~gD-~I~I~Twv~~~g~~~~~R~f~I~d--~~~G--elia~a~s~wV~vD~~tRRpvriPe 230 (302)
...|... -.|+|.+++.-|+ .+.+.-.++-.++.++.-.-.+.. ..+| .++-.|..++|--|..++ +++++.
T Consensus 59 ~~~VtAsV~~i~f~~~~~~~~~d~i~~a~Vt~a~~sSMEv~i~V~q~~~~~~~~~~~~kA~f~fVard~~~~-~~~l~~ 136 (357)
T KOG2763|consen 59 RTIVTASVDRIDFEKPSEVGQVDIIIVAKVTWAGKSSMEVSIYVMQEDLATGEKSLVLKATFTFVARDATNG-KAPLNG 136 (357)
T ss_pred eEEEEeeEEEEEeeccccccceeEEEEEEEEeccccceEEEEEEEEehhccchhhheeeeEEEEEEecCCCC-ccccCC
Confidence 3445444 3688899888885 444546667778888765444432 2334 368899999999998888 677654
No 94
>TIGR03330 SAM_DCase_Bsu S-adenosylmethionine decarboxylase proenzyme, Bacillus form. Members of this protein family are the single chain precursor of the two chains of the mature S-adenosylmethionine decarboxylase as found in Methanocaldococcus jannaschii, Bacillus subtilis, and a wide range of other species. It differs substantially in architecture from the form as found in Escherichia coli, and lacks any extended homology to the eukaryotic form (TIGR00535).
Probab=20.08 E-value=2.9e+02 Score=22.11 Aligned_cols=31 Identities=26% Similarity=0.392 Sum_probs=25.6
Q ss_pred EEEEeeeCCCCCCCCcCHHHHHHHHHHHHHH
Q 022145 105 QTVVVRSYEVGPDKTATLESILNLFQETALN 135 (302)
Q Consensus 105 ~~~~Vr~~D~D~~G~v~~~~yl~~~qeAa~~ 135 (302)
..+.+..|+||+.---....+-+.+.+|+..
T Consensus 5 ~Hli~dly~c~~~~L~d~~~l~~~l~~a~~~ 35 (112)
T TIGR03330 5 RHLIVDLYGCDPEKLDDVEFIEEILLEAAKV 35 (112)
T ss_pred eEEEEEEeCCChHHCCCHHHHHHHHHHHHHH
Confidence 5677899999988888888888888888754
Done!