Query 022152
Match_columns 302
No_of_seqs 51 out of 53
Neff 3.1
Searched_HMMs 13730
Date Mon Mar 25 14:47:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022152.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022152hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1urua_ a.238.1.1 (A:) Amphiph 54.5 25 0.0018 26.3 7.9 56 107-162 159-214 (217)
2 d2d4ca1 a.238.1.1 (A:11-247) E 49.3 21 0.0015 27.4 6.7 47 107-158 190-236 (237)
3 d1qvra2 c.37.1.20 (A:149-535) 22.2 47 0.0034 29.1 5.0 51 64-114 253-303 (387)
4 d2asxa1 a.274.1.1 (A:278-331) 21.0 91 0.0067 19.3 6.4 51 60-117 4-54 (54)
5 d1bg1a1 a.47.1.1 (A:136-321) S 19.2 1.1E+02 0.0079 24.6 6.3 39 177-218 119-157 (186)
6 d1ez3a_ a.47.2.1 (A:) Syntaxin 17.7 1.2E+02 0.0087 21.6 5.7 96 63-162 9-115 (124)
7 d2b5id2 g.18.1.1 (D:103-165) I 15.9 29 0.0021 24.4 1.6 12 240-251 2-13 (63)
8 d1ewqa1 a.113.1.1 (A:267-541) 15.3 1.1E+02 0.0077 23.5 5.2 46 118-166 18-63 (275)
9 d1nlwa_ a.38.1.1 (A:) Mad prot 14.3 1.3E+02 0.0093 20.1 4.8 20 108-127 59-78 (79)
10 d2ff4a2 a.118.8.3 (A:105-283) 13.5 71 0.0052 24.1 3.5 71 141-211 62-132 (179)
No 1
>d1urua_ a.238.1.1 (A:) Amphiphysin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=54.48 E-value=25 Score=26.32 Aligned_cols=56 Identities=9% Similarity=0.031 Sum_probs=43.1
Q ss_pred HHHHHHHHHhhchHHHHHHHhccccCCCcchhhhhhHHHHHHHHHHHhHHHHHHHh
Q 022152 107 RITTILKDVIQNKDRIIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGALTAS 162 (302)
Q Consensus 107 ~mnsHLeaVLkeK~~LrqRLqkP~~~enLPVEA~yHR~vVeLL~lavsfIe~Lee~ 162 (302)
.++..|..=|..=...+.....+.....+-+.+.||..+.+++..+...|.+|.+.
T Consensus 159 ~~~~~l~~el~~~~~~~~~~~~~~l~~~~~~q~~~~~~~~~~~~~l~~~~~~l~~~ 214 (217)
T d1urua_ 159 ILNTELHDELPALYDSRILFLVTNLQTLFATEQVFHNETAKIYSELEAIVDKLATE 214 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 45555555555555556667777777888999999999999999999999998765
No 2
>d2d4ca1 a.238.1.1 (A:11-247) Endophilin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.27 E-value=21 Score=27.39 Aligned_cols=47 Identities=13% Similarity=0.211 Sum_probs=32.0
Q ss_pred HHHHHHHHHhhchHHHHHHHhccccCCCcchhhhhhHHHHHHHHHHHhHHHH
Q 022152 107 RITTILKDVIQNKDRIIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGA 158 (302)
Q Consensus 107 ~mnsHLeaVLkeK~~LrqRLqkP~~~enLPVEA~yHR~vVeLL~lavsfIe~ 158 (302)
.+...|..++.++..+...| ...+-.+..||+..+++|..+...|++
T Consensus 190 ~~~~~l~~l~~~~~~~~~~l-----~~~~~aq~~y~~~~~~~l~~l~~~l~~ 236 (237)
T d2d4ca1 190 IAESSMFNLLEMDIEQVSQL-----SALVQAQLEYHKQAVQILQQVTVRLEE 236 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34445555555555555444 347778889999999999888877653
No 3
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=22.20 E-value=47 Score=29.10 Aligned_cols=51 Identities=22% Similarity=0.363 Sum_probs=38.9
Q ss_pred HHHHHHHHHHhhcccceeeeccccccccccChhHHHHHHHHHHHHHHHHHH
Q 022152 64 RELTAVQRKIADLQVELQGRKDDKNVAHLTHVSEMQKKIETLSRITTILKD 114 (302)
Q Consensus 64 rQIT~lQ~eLdq~nLEIelLKlDKeTADltH~~~L~kK~e~LQ~mnsHLea 114 (302)
++|..+.++|.+++.|.+.++.+++.........+.+....|+.-..-|++
T Consensus 253 ~el~~ler~I~qLe~E~~aL~ke~d~~s~~rl~~le~el~~lee~~~~L~~ 303 (387)
T d1qvra2 253 EEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRA 303 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCSSHHHHSCTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHhhhhhhhhHHHHHHHHHHH
Confidence 568888999999999999999999887777777776666666644444443
No 4
>d2asxa1 a.274.1.1 (A:278-331) Hypothetical protein AF1503 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=21.00 E-value=91 Score=19.29 Aligned_cols=51 Identities=25% Similarity=0.356 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHhhcccceeeeccccccccccChhHHHHHHHHHHHHHHHHHHHhh
Q 022152 60 IRVLRELTAVQRKIADLQVELQGRKDDKNVAHLTHVSEMQKKIETLSRITTILKDVIQ 117 (302)
Q Consensus 60 ~s~LrQIT~lQ~eLdq~nLEIelLKlDKeTADltH~~~L~kK~e~LQ~mnsHLeaVLk 117 (302)
.+-|++++..-+.|.+=++.. ...++...+.+++-.++++.|...|+..++
T Consensus 4 t~Pl~~l~~~~~~ia~Gdl~~-------~i~~~~~~dEig~L~~~fn~M~~~l~~~~e 54 (54)
T d2asxa1 4 TRPIIELSNTADKIAEGNLEA-------EVPHQNRADEIGILAKSIERLRRSLKVAME 54 (54)
T ss_dssp HHHHHHHHHHHHHHHTTCTTC-------CCTTTTCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHCCCCCC-------ccCCCCCccHHHHHHHHHHHHHHHHHHHhC
Confidence 456888888889998887764 344556788999999999999999987763
No 5
>d1bg1a1 a.47.1.1 (A:136-321) STAT3b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=19.20 E-value=1.1e+02 Score=24.56 Aligned_cols=39 Identities=18% Similarity=0.055 Sum_probs=30.1
Q ss_pred CcccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHhhhcCC
Q 022152 177 SIWGEMLRPIPVALASCTRFFEAMSAMRESFATLQHLRVGDS 218 (302)
Q Consensus 177 ~~~~~~Lr~Ip~alasc~~~~ea~s~~r~~~a~l~~~r~~~~ 218 (302)
+-...+|+.|-.. |+...+++-++|+-+.-|.+++.-..
T Consensus 119 ~P~~~~LDqLQ~W---~e~lAe~i~q~Rqqlk~l~~l~~k~~ 157 (186)
T d1bg1a1 119 GPPNICLDRLENW---ITSLAESQLQTRQQIKKLEELQQKVS 157 (186)
T ss_dssp CCCCCCCHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred CCcccchHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3345567777544 88888999999999999999887644
No 6
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=17.67 E-value=1.2e+02 Score=21.59 Aligned_cols=96 Identities=11% Similarity=0.229 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHhhcccceeeeccccccccccChhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHh--------ccccCCC
Q 022152 63 LRELTAVQRKIADLQVELQGRKDDKNVAHLTHVSEMQKKIETLSRITTILKDVIQNKDRIIARLQ--------QPYSLDC 134 (302)
Q Consensus 63 LrQIT~lQ~eLdq~nLEIelLKlDKeTADltH~~~L~kK~e~LQ~mnsHLeaVLkeK~~LrqRLq--------kP~~~en 134 (302)
+.++..++.+|.+++..+..++.-. ..=|+.+.-...-. ..|++++..+.+.=..|+.||. .+-++..
T Consensus 9 f~eV~~Ir~~I~~i~~~v~~i~~~~-~~~l~~~~~~~~~~---~~l~~~~~~i~~~a~~ik~~Lk~l~~~~~~~~~~~~~ 84 (124)
T d1ez3a_ 9 FEQVEEIRGFIDKIAENVEEVKRKH-SAILASPNPDEKTK---EELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRS 84 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCSSCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCcchhHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Confidence 5667777777777777666665332 12233322222222 2355555555555555665554 3444433
Q ss_pred cc---hhhhhhHHHHHHHHHHHhHHHHHHHh
Q 022152 135 IP---VEAEYQKQFSELLMKAASDYGALTAS 162 (302)
Q Consensus 135 LP---VEA~yHR~vVeLL~lavsfIe~Lee~ 162 (302)
=+ +--..|..+..-|..++.-|..++..
T Consensus 85 s~~~Rir~~q~~~L~~kf~e~m~~yq~~q~~ 115 (124)
T d1ez3a_ 85 SADLRIRKTQHSTLSRKFVEVMSEYNATQSD 115 (124)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 22334555555555555555555543
No 7
>d2b5id2 g.18.1.1 (D:103-165) Interleukin-2 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.91 E-value=29 Score=24.42 Aligned_cols=12 Identities=58% Similarity=1.561 Sum_probs=10.4
Q ss_pred ccCCCCCCCCCC
Q 022152 240 CVTPPPWTNESS 251 (302)
Q Consensus 240 ~~~~~~~~~~~~ 251 (302)
|-.||||..|+.
T Consensus 2 C~ePp~w~He~~ 13 (63)
T d2b5id2 2 CREPPPWENEAT 13 (63)
T ss_dssp BCCCCCCSSCCS
T ss_pred CCCCCCCCCccc
Confidence 789999999865
No 8
>d1ewqa1 a.113.1.1 (A:267-541) DNA repair protein MutS, domain III {Thermus aquaticus [TaxId: 271]}
Probab=15.29 E-value=1.1e+02 Score=23.55 Aligned_cols=46 Identities=13% Similarity=0.151 Sum_probs=29.8
Q ss_pred chHHHHHHHhccccCCCcchhhhhhHHHHHHHHHHHhHHHHHHHhHhhh
Q 022152 118 NKDRIIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGALTASVADF 166 (302)
Q Consensus 118 eK~~LrqRLqkP~~~enLPVEA~yHR~vVeLL~lavsfIe~Lee~Le~I 166 (302)
+|+-|+++|.+|++.-. .|+..| .+|+.|-.-..+...|...|..|
T Consensus 18 GkRlLr~wl~~Pl~d~~-~I~~R~--d~Ve~l~~~~~~~~~l~~~L~~i 63 (275)
T d1ewqa1 18 GRRLLQSWLRHPLLDRG-PLEARL--DRVEGFVREGALREGVRRLLYRL 63 (275)
T ss_dssp HHHHHHHHHHSCCCCHH-HHHHHH--HHHHHHHHCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCccCCHH-HHHHHH--HHHHHHHhChhhHHHHHHHHhcc
Confidence 47899999999987533 334333 45665555455666677766655
No 9
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.34 E-value=1.3e+02 Score=20.12 Aligned_cols=20 Identities=5% Similarity=0.212 Sum_probs=10.0
Q ss_pred HHHHHHHHhhchHHHHHHHh
Q 022152 108 ITTILKDVIQNKDRIIARLQ 127 (302)
Q Consensus 108 mnsHLeaVLkeK~~LrqRLq 127 (302)
+....+.+-++.+.|++||.
T Consensus 59 l~~~~~~L~~~~~~L~~~l~ 78 (79)
T d1nlwa_ 59 AVHQIDQLQREQRHLKRQLE 78 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 33334444455556666654
No 10
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=13.53 E-value=71 Score=24.05 Aligned_cols=71 Identities=14% Similarity=-0.039 Sum_probs=50.8
Q ss_pred hhHHHHHHHHHHHhHHHHHHHhHhhhhhcccccCCCCcccccccchhhhhhhhhHHHHHHHHHHHHHHHHH
Q 022152 141 YQKQFSELLMKAASDYGALTASVADFQWSQSFKEPPSIWGEMLRPIPVALASCTRFFEAMSAMRESFATLQ 211 (302)
Q Consensus 141 yHR~vVeLL~lavsfIe~Lee~Le~I~W~snF~~~~~~~~~~Lr~Ip~alasc~~~~ea~s~~r~~~a~l~ 211 (302)
++...++.+...+..+.++..+=+-+.+...--.-++.-+..-+.+-.+++..+++-+|+...++....|.
T Consensus 62 l~~~~~~a~~~la~~~~~~g~~~~Al~~~~~al~~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~ 132 (179)
T d2ff4a2 62 LVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLA 132 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 34445566666666666665555566666665555666777888888999999999999999998776664
Done!