Your job contains 1 sequence.
>022155
MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL
SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLL
DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAM
AVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL
SRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV
ER
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022155
(302 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2174577 - symbol:XRCC3 "homolog of X-ray repai... 912 1.7e-91 1
DICTYBASE|DDB_G0283637 - symbol:xrcc3 "putative DNA repai... 232 5.8e-38 3
UNIPROTKB|O43542 - symbol:XRCC3 "DNA repair protein XRCC3... 314 4.4e-34 2
UNIPROTKB|F1S9W9 - symbol:XRCC3 "Uncharacterized protein"... 310 4.4e-34 2
UNIPROTKB|E2RAE7 - symbol:XRCC3 "Uncharacterized protein"... 293 4.4e-34 2
UNIPROTKB|Q08DH8 - symbol:XRCC3 "DNA repair protein XRCC3... 300 1.1e-33 2
UNIPROTKB|Q5ZM26 - symbol:XRCC3 "Uncharacterized protein"... 342 4.2e-31 1
ZFIN|ZDB-GENE-050320-116 - symbol:xrcc3 "X-ray repair com... 339 8.8e-31 1
MGI|MGI:1921585 - symbol:Xrcc3 "X-ray repair complementin... 319 1.2e-28 1
RGD|1306849 - symbol:Xrcc3 "X-ray repair complementing de... 309 1.3e-27 1
UNIPROTKB|G4MNW7 - symbol:MGG_06985 "Uncharacterized prot... 240 1.5e-25 2
FB|FBgn0003480 - symbol:spn-B "spindle B" species:7227 "D... 232 2.7e-25 2
MGI|MGI:1099436 - symbol:Rad51b "RAD51 homolog B" species... 282 9.7e-25 1
UNIPROTKB|O15315 - symbol:RAD51B "DNA repair protein RAD5... 267 3.8e-23 1
UNIPROTKB|C9JYJ0 - symbol:RAD51B "DNA repair protein RAD5... 267 7.1e-23 1
UNIPROTKB|E1BE93 - symbol:RAD51B "Uncharacterized protein... 260 2.1e-22 1
SGD|S000000897 - symbol:RAD51 "Strand exchange protein" s... 224 9.9e-21 2
UNIPROTKB|E1BVI8 - symbol:RAD51B "Uncharacterized protein... 241 2.1e-20 1
ZFIN|ZDB-GENE-040426-2750 - symbol:rad51b "RAD51 homolog ... 236 1.2e-19 1
RGD|1560681 - symbol:Rad51b "RAD51 homolog B (S. cerevisi... 226 8.3e-19 1
GENEDB_PFALCIPARUM|MAL8P1.76 - symbol:MAL8P1.76 "meiotic ... 212 4.7e-18 2
UNIPROTKB|Q8IB05 - symbol:MAL8P1.76 "Meiotic recombinatio... 212 4.7e-18 2
TAIR|locus:2147092 - symbol:RAD51 species:3702 "Arabidops... 212 5.0e-18 2
UNIPROTKB|E2R3P3 - symbol:RAD51B "Uncharacterized protein... 218 5.8e-18 1
UNIPROTKB|F1SA21 - symbol:RAD51B "Uncharacterized protein... 212 2.5e-17 1
TAIR|locus:2084558 - symbol:DMC1 "DISRUPTION OF MEIOTIC C... 205 7.1e-17 2
POMBASE|SPAC644.14c - symbol:rad51 "RecA family recombina... 216 1.9e-16 1
POMBASE|SPAC20H4.07 - symbol:rad57 "RecA family ATPase Ra... 215 2.3e-16 1
ASPGD|ASPL0000051939 - symbol:AN10145 species:162425 "Eme... 214 2.3e-16 2
FB|FBgn0003479 - symbol:spn-A "spindle A" species:7227 "D... 214 2.3e-16 1
SGD|S000002411 - symbol:RAD57 "Protein that stimulates st... 193 2.4e-16 2
ASPGD|ASPL0000057020 - symbol:uvsC species:162425 "Emeric... 208 2.6e-16 2
UNIPROTKB|B6JXU7 - symbol:SJAG_01410 "DNA repair protein ... 215 2.8e-16 1
DICTYBASE|DDB_G0273611 - symbol:rad51-2 "putative DNA rep... 212 6.7e-16 1
DICTYBASE|DDB_G0273139 - symbol:rad51-1 "putative DNA rep... 212 6.7e-16 1
CGD|CAL0001214 - symbol:RAD51 species:5476 "Candida albic... 212 7.7e-16 1
UNIPROTKB|Q59UY8 - symbol:RAD51 "Putative uncharacterized... 212 7.7e-16 1
UNIPROTKB|A3E3X4 - symbol:rad51 "Rad51" species:4754 "Pne... 210 1.2e-15 1
UNIPROTKB|A3E3X6 - symbol:rad51 "Rad51" species:263815 "P... 210 1.2e-15 1
UNIPROTKB|B0M1M6 - symbol:pigRAD51 "Rad51" species:9823 "... 209 1.6e-15 1
UNIPROTKB|G1K2Z8 - symbol:RAD51 "Uncharacterized protein"... 208 2.2e-15 1
ZFIN|ZDB-GENE-041010-204 - symbol:rad51c "rad51 homolog C... 209 2.2e-15 1
UNIPROTKB|P37383 - symbol:RAD51A "DNA repair protein RAD5... 208 2.3e-15 1
UNIPROTKB|Q06609 - symbol:RAD51 "DNA repair protein RAD51... 208 2.3e-15 1
UNIPROTKB|F1S262 - symbol:RAD51C "Uncharacterized protein... 198 3.8e-15 2
UNIPROTKB|G5EGG8 - symbol:rad-51 "RecA/Rad51/Dmc1-like pr... 201 6.0e-15 2
UNIPROTKB|Q2KJ94 - symbol:RAD51 "DNA repair protein RAD51... 205 6.1e-15 1
UNIPROTKB|Q8MKI8 - symbol:RAD51 "DNA repair protein RAD51... 205 6.1e-15 1
UNIPROTKB|P70099 - symbol:RAD51 "DNA repair protein RAD51... 205 6.1e-15 1
MGI|MGI:97890 - symbol:Rad51 "RAD51 homolog" species:1009... 205 6.1e-15 1
WB|WBGene00004297 - symbol:rad-51 species:6239 "Caenorhab... 201 1.2e-14 2
UNIPROTKB|Q95Q25 - symbol:rad-51 "Protein RAD-51, isoform... 201 1.2e-14 2
UNIPROTKB|O77507 - symbol:RAD51 "DNA repair protein RAD51... 201 2.1e-14 1
UNIPROTKB|F1N1D2 - symbol:DMC1 "Uncharacterized protein" ... 199 4.0e-14 1
UNIPROTKB|Q9P972 - symbol:LIM15/DMC1 homolog "LIM15/DMC1 ... 199 4.3e-14 1
ZFIN|ZDB-GENE-060331-93 - symbol:dmc1 "DMC1 dosage suppre... 189 6.0e-14 2
UNIPROTKB|F1PMI7 - symbol:RAD51C "Uncharacterized protein... 193 7.4e-14 2
UNIPROTKB|Q8R2J9 - symbol:RAD51C "DNA repair protein RAD5... 192 9.7e-14 2
UNIPROTKB|F1MW99 - symbol:RAD51C "Uncharacterized protein... 192 1.3e-13 2
ZFIN|ZDB-GENE-040426-2286 - symbol:rad51 "RAD51 homolog (... 195 1.3e-13 1
UNIPROTKB|Q9DGC3 - symbol:Dmc1 "DMC1" species:8330 "Cynop... 193 2.5e-13 1
UNIPROTKB|J3QKK3 - symbol:RAD51C "DNA repair protein RAD5... 187 3.4e-13 2
POMBASE|SPAC8E11.03c - symbol:dmc1 "RecA family ATPase Dm... 191 4.0e-13 1
UNIPROTKB|G3V3Q2 - symbol:XRCC3 "DNA repair protein XRCC3... 124 4.6e-13 2
UNIPROTKB|O43502 - symbol:RAD51C "DNA repair protein RAD5... 187 5.8e-13 2
UNIPROTKB|E2RK50 - symbol:DMC1 "Uncharacterized protein" ... 187 1.4e-12 1
UNIPROTKB|F1SKQ1 - symbol:DMC1 "Uncharacterized protein" ... 187 1.4e-12 1
RGD|1307611 - symbol:Dmc1 "DMC1 dosage suppressor of mck1... 187 1.4e-12 1
UNIPROTKB|F1NI95 - symbol:DMC1 "Uncharacterized protein" ... 187 1.5e-12 1
UNIPROTKB|Q14565 - symbol:DMC1 "Meiotic recombination pro... 186 1.8e-12 1
MGI|MGI:105393 - symbol:Dmc1 "DMC1 dosage suppressor of m... 186 1.8e-12 1
UNIPROTKB|Q50LF6 - symbol:tilDmc1 "RecA homolog Dmc1" spe... 186 1.9e-12 1
UNIPROTKB|Q6BP40 - symbol:DEHA2E16742g "DEHA2E16742p" spe... 185 2.2e-12 1
FB|FBgn0003482 - symbol:spn-D "spindle D" species:7227 "D... 174 2.5e-12 2
MGI|MGI:2150020 - symbol:Rad51c "RAD51 homolog C" species... 181 3.2e-12 2
UNIPROTKB|Q9C0P6 - symbol:dmc1 "Putative DMC1 protein" sp... 184 3.5e-12 1
UNIPROTKB|F1M525 - symbol:Rad51c "Protein Rad51c" species... 178 4.6e-12 2
UNIPROTKB|G3V399 - symbol:XRCC3 "DNA repair protein XRCC3... 164 7.3e-12 1
RGD|1563603 - symbol:Rad51 "RAD51 homolog (S. cerevisiae)... 170 7.6e-12 1
RGD|1563765 - symbol:Rad51c "Rad51 homolog c (S. cerevisi... 178 8.0e-12 2
DICTYBASE|DDB_G0284507 - symbol:DDB_G0284507 "putative Ra... 182 8.4e-12 1
UNIPROTKB|Q6FKF0 - symbol:CAGL0L12100g "Similar to unipro... 179 1.3e-11 1
GENEDB_PFALCIPARUM|PF11_0087 - symbol:PF11_0087 "Rad51 ho... 179 1.5e-11 1
UNIPROTKB|Q8IIS8 - symbol:Rad51 "Rad51 homolog" species:3... 179 1.5e-11 1
UNIPROTKB|Q50LF7 - symbol:eDmc1 "RecA homolog DMC1" speci... 178 1.8e-11 1
UNIPROTKB|Q9GRA3 - symbol:CnDmc1 "DMC1 homologue CnDMC1" ... 177 2.2e-11 1
SGD|S000000981 - symbol:DMC1 "Meiosis-specific protein re... 177 2.3e-11 1
UNIPROTKB|Q4WAR2 - symbol:AFUA_7G02200 "Meiotic recombina... 172 9.3e-11 1
CGD|CAL0005415 - symbol:RAD57 species:5476 "Candida albic... 152 1.2e-10 3
UNIPROTKB|Q0MR21 - symbol:Q0MR21 "DMC1-like protein" spec... 171 1.2e-10 1
TAIR|locus:2825233 - symbol:RAD51D "homolog of RAD51 D" s... 160 1.6e-10 2
ASPGD|ASPL0000094064 - symbol:AN11929 species:162425 "Eme... 174 2.2e-10 1
ASPGD|ASPL0000098803 - symbol:AN11930 species:162425 "Eme... 174 2.2e-10 1
UNIPROTKB|Q5ARI8 - symbol:AN9092.2 "Meiotic recombination... 174 2.2e-10 1
UNIPROTKB|Q74ZU7 - symbol:AGR101C "AGR101Cp" species:2848... 168 2.7e-10 1
UNIPROTKB|O75771 - symbol:RAD51D "DNA repair protein RAD5... 159 3.7e-10 2
ZFIN|ZDB-GENE-040426-2490 - symbol:rad51d "RAD51 homolog ... 160 4.4e-10 2
UNIPROTKB|Q2HJ51 - symbol:RAD51D "DNA repair protein RAD5... 157 1.0e-09 2
UNIPROTKB|E2REH7 - symbol:XRCC2 "Uncharacterized protein"... 154 6.9e-09 1
UNIPROTKB|A7MB17 - symbol:XRCC2 "XRCC2 protein" species:9... 154 7.0e-09 1
WARNING: Descriptions of 22 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2174577 [details] [associations]
symbol:XRCC3 "homolog of X-ray repair cross complementing
3" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006281 "DNA repair" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006302 "double-strand break repair"
evidence=RCA;IMP] [GO:0007126 "meiosis" evidence=IMP] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007129 "synapsis" evidence=RCA] [GO:0007131 "reciprocal
meiotic recombination" evidence=RCA] [GO:0010212 "response to
ionizing radiation" evidence=RCA] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0045003 "double-strand break repair via synthesis-dependent
strand annealing" evidence=IDA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003697 GO:GO:0045003 EMBL:AB011482
GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 EMBL:AB062455 EMBL:AB073492
EMBL:AJ438908 EMBL:AJ438909 EMBL:AY032998 IPI:IPI00533166
RefSeq:NP_200554.1 RefSeq:NP_851202.1 UniGene:At.26227
UniGene:At.67214 ProteinModelPortal:Q9FKM5 SMR:Q9FKM5 STRING:Q9FKM5
EnsemblPlants:AT5G57450.1 EnsemblPlants:AT5G57450.2 GeneID:835850
KEGG:ath:AT5G57450 GeneFarm:4801 TAIR:At5g57450
HOGENOM:HOG000239162 InParanoid:Q9FKM5 KO:K10880 OMA:YSPETPN
PhylomeDB:Q9FKM5 ProtClustDB:CLSN2687414 Genevestigator:Q9FKM5
GermOnline:AT5G57450 Uniprot:Q9FKM5
Length = 304
Score = 912 (326.1 bits), Expect = 1.7e-91, P = 1.7e-91
Identities = 177/302 (58%), Positives = 225/302 (74%)
Query: 7 PQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPS 66
P+NLL T K T GC I+D CL GGI C+S+TE+VAESG GKTQ CLQL+L QLP
Sbjct: 8 PENLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPI 67
Query: 67 SHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSN-------DHNPCDYIFVQSVHSVDQL 119
SHGGL+ SSLYLH+EFPFP RRLHQLSHTF SN + NPCD++FVQ+VHSVD L
Sbjct: 68 SHGGLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVDHL 127
Query: 120 LDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKA 179
DIMP+I+ F+ NS +R P++LIV+DS+AALFRS+FDNT DLKKRS LFFKISG LK
Sbjct: 128 FDIMPRIDGFVGNSK-TRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKLKQ 186
Query: 180 MAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLF 239
+A F LA+++TNQV DL+E ++G++GLR+GNL LYSSGR + P+LG+AWANCVNSR F
Sbjct: 187 LASKFDLAIVITNQVTDLVETSDGLSGLRIGNLRYLYSSGRRVVPSLGLAWANCVNSRFF 246
Query: 240 LSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFG 299
+SR++ +V++ + S V R +R L +VF+P+L +SCEF ITREG+
Sbjct: 247 ISRSDGSIVKDRSEKDENCSSS-----VSRSAKRRLDIVFSPYLPGSSCEFMITREGICA 301
Query: 300 VE 301
V+
Sbjct: 302 VQ 303
>DICTYBASE|DDB_G0283637 [details] [associations]
symbol:xrcc3 "putative DNA repair protein XRCC3"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
dictyBase:DDB_G0283637 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0003677
GO:GO:0006310 GO:GO:0006302 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 Pfam:PF08423 RefSeq:XP_638929.1
ProteinModelPortal:Q54QU4 EnsemblProtists:DDB0232275 GeneID:8624168
KEGG:ddi:DDB_G0283637 InParanoid:Q54QU4 Uniprot:Q54QU4
Length = 564
Score = 232 (86.7 bits), Expect = 5.8e-38, Sum P(3) = 5.8e-38
Identities = 47/99 (47%), Positives = 65/99 (65%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT L +++ K + GC I+D+CLGGGI ITE+ ESGSGKTQ C+QL+L QL
Sbjct: 152 MTSLELEKLQISSIKLSTGCKIMDKCLGGGISPIGITEIAGESGSGKTQLCIQLSLQVQL 211
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHN 103
P GGL+ + LY+ TE PFP +RL+Q+ +T + + N
Sbjct: 212 PFEMGGLNGACLYITTEPPFPTKRLNQM-YTVKSGKNTN 249
Score = 152 (58.6 bits), Expect = 5.8e-38, Sum P(3) = 5.8e-38
Identities = 31/95 (32%), Positives = 60/95 (63%)
Query: 103 NPCDYIFVQSVHSVDQLLDIM-PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
+P D IF+QS ++D L+D++ +I +++ + IRL++IDSIAAL R ++ N
Sbjct: 279 SPLDNIFIQSTTTIDSLMDLLINQITGYLEKKT-----IRLLIIDSIAALLRHEYGNEKS 333
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
++ +++ L + ++ LK + +G+ ++V NQV D
Sbjct: 334 EIIEKTKLLWSLANRLKLINEQYGITIVVVNQVTD 368
Score = 74 (31.1 bits), Expect = 5.8e-38, Sum P(3) = 5.8e-38
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 224 PALGIAWANCVNSRLFLSRNEDFV 247
PALG++WAN +NSR L R++ V
Sbjct: 500 PALGLSWANFINSRFLLQRSKSTV 523
Score = 37 (18.1 bits), Expect = 4.8e-26, Sum P(3) = 4.8e-26
Identities = 6/27 (22%), Positives = 14/27 (51%)
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMD 161
N + I ++V++ + F F N ++
Sbjct: 353 NEQYGITIVVVNQVTDFFIDSFPNNVN 379
>UNIPROTKB|O43542 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9606 "Homo
sapiens" [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0010033 "response to organic substance" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006281 "DNA repair"
evidence=IGI] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 MIM:114480 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOGENOM:HOG000239162 KO:K10880 CTD:7517
HOVERGEN:HBG054179 OMA:INQVTEA OrthoDB:EOG47D9GS EMBL:AF035586
EMBL:AF037222 EMBL:AF508041 EMBL:BC001036 EMBL:BC002949
EMBL:BC011725 IPI:IPI00023073 RefSeq:NP_001093588.1
RefSeq:NP_001093589.1 RefSeq:NP_005423.1 UniGene:Hs.592325
UniGene:Hs.733412 ProteinModelPortal:O43542 SMR:O43542
IntAct:O43542 STRING:O43542 PhosphoSite:O43542 PaxDb:O43542
PRIDE:O43542 DNASU:7517 Ensembl:ENST00000352127
Ensembl:ENST00000445556 Ensembl:ENST00000553264
Ensembl:ENST00000554913 Ensembl:ENST00000555055 GeneID:7517
KEGG:hsa:7517 UCSC:uc001ynx.4 GeneCards:GC14M104163 HGNC:HGNC:12830
MIM:600675 MIM:613972 neXtProt:NX_O43542 PharmGKB:PA37422
InParanoid:O43542 PhylomeDB:O43542 GenomeRNAi:7517 NextBio:29415
ArrayExpress:O43542 Bgee:O43542 CleanEx:HS_XRCC3
Genevestigator:O43542 GermOnline:ENSG00000126215 Uniprot:O43542
Length = 346
Score = 314 (115.6 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
Identities = 88/238 (36%), Positives = 121/238 (50%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P + ITEL S +GKTQ LQL L+ Q P HGGL A
Sbjct: 76 PTQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEA 135
Query: 74 SSLYLHTEFPFPMRRLHQLS------HTFRPSNDHNPCDY---IFVQSVHSVDQLLDIMP 124
++Y+ TE FP +RL QL T P + IF++ V VD LL+ +
Sbjct: 136 GAVYICTEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVN 195
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K + SR RL+VIDS+AA FR +FD+ + R + L+ ++ F
Sbjct: 196 KKVPVLL----SRGMARLVVIDSVAAPFRCEFDSQASAPRARHLQ--SLGATLRELSSAF 249
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
VL NQV + ME G G LG + R + PALGI WAN + RL R
Sbjct: 250 QSPVLCINQVTEAMEEQ----GAAHGPLG--FWDER-VSPALGITWANQLLVRLLADR 300
Score = 72 (30.4 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 273 RSLHVVFAPHLADTSCEFEITREGVFG 299
R+L V+ APHL +SC + I+ EGV G
Sbjct: 313 RTLRVLSAPHLPPSSCSYTISAEGVRG 339
>UNIPROTKB|F1S9W9 [details] [associations]
symbol:XRCC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0003677 GO:GO:0006281
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 OMA:INQVTEA
EMBL:CU694215 Ensembl:ENSSSCT00000002829 Uniprot:F1S9W9
Length = 347
Score = 310 (114.2 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
Identities = 85/239 (35%), Positives = 121/239 (50%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P + ITEL S +GKTQ LQL L+ QLP HGGL
Sbjct: 77 PEQHQRLSLGCPVLDGLLRGGLPLDGITELAGRSSTGKTQLALQLCLAVQLPRQHGGLGT 136
Query: 74 SSLYLHTEFPFPMRRLHQL---SHTFRPSNDHNPC------DYIFVQSVHSVDQLLD-IM 123
++Y+ TE FP RRL QL RP + D IFV+ V VD LLD +
Sbjct: 137 GAVYVCTEGAFPSRRLQQLVAQQQLLRPDVPGDVLGKIKFGDQIFVEHVADVDTLLDCVS 196
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
K+ + SR RL+VIDS+AA FR +F D +R+ + L+ ++
Sbjct: 197 RKVPVLL-----SRGVARLLVIDSVAAPFRCEFAGA--DSARRARRLQALGAELRRLSCA 249
Query: 184 FGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
F VL NQV + ++ +E + G PALGI W++ + RL + R
Sbjct: 250 FRSPVLCINQVTEAVDAHEAAG-----------AGGERTSPALGITWSSQLLMRLLMDR 297
Score = 76 (31.8 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 273 RSLHVVFAPHLADTSCEFEITREGVFG 299
R+L +VFAPHL SC + +T EGV G
Sbjct: 310 RTLRLVFAPHLPPWSCCYTVTTEGVRG 336
>UNIPROTKB|E2RAE7 [details] [associations]
symbol:XRCC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
GeneTree:ENSGT00550000074609 KO:K10880 CTD:7517 OMA:INQVTEA
EMBL:AAEX03006057 RefSeq:XP_003435154.1 Ensembl:ENSCAFT00000029054
GeneID:100687200 KEGG:cfa:100687200 Uniprot:E2RAE7
Length = 349
Score = 293 (108.2 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
Identities = 84/239 (35%), Positives = 121/239 (50%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++DR L GG+P + +TEL S +GKTQ LQL L+ Q P HGGL A
Sbjct: 76 PARPQRLSLGCPVLDRLLRGGLPLDGVTELAGLSSAGKTQLALQLCLAVQFPPRHGGLDA 135
Query: 74 SSLYLHTEFPFPMRRLHQLS------HTFRPSNDHNPCDY---IFVQSVHSVDQLLD-IM 123
++Y+ TE FP RL QL T P + + IF++ V VD LL+ +
Sbjct: 136 GAMYICTEDVFPNLRLQQLIAQQQRLRTDVPGEVVSRIKFSNQIFIEHVADVDSLLECVR 195
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
K+ + SR RL+VIDS+AA FR +FD L R+ + L+ ++
Sbjct: 196 EKVPVLL-----SRGMARLVVIDSVAAPFRCEFDGPA--LVPRARHLQALGAALRRLSCA 248
Query: 184 FGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
F VL NQV + E +G R L + PALG+ W+N + RL + R
Sbjct: 249 FQSPVLCINQVTEATE-EQGT-APRPHGL-----RDERVSPALGMTWSNQLLMRLMVHR 300
Score = 93 (37.8 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
Identities = 28/78 (35%), Positives = 39/78 (50%)
Query: 222 ICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAP 281
+ PALG+ W+N + RL + R R + V +G D R+L VVFAP
Sbjct: 280 VSPALGMTWSNQLLMRLMVHRR-----RPG---DEAVTPAGPPD-------RTLSVVFAP 324
Query: 282 HLADTSCEFEITREGVFG 299
HL +SC + + EGV G
Sbjct: 325 HLPPSSCSYTVNAEGVRG 342
>UNIPROTKB|Q08DH8 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0005759
GO:GO:0003677 GO:GO:0006281 GO:GO:0006310 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HOGENOM:HOG000239162
KO:K10880 EMBL:BC123742 IPI:IPI00717766 RefSeq:NP_001071585.1
UniGene:Bt.41484 ProteinModelPortal:Q08DH8 STRING:Q08DH8
PRIDE:Q08DH8 Ensembl:ENSBTAT00000013145 GeneID:768244
KEGG:bta:768244 CTD:7517 HOVERGEN:HBG054179 InParanoid:Q08DH8
OMA:INQVTEA OrthoDB:EOG47D9GS NextBio:20918540 Uniprot:Q08DH8
Length = 341
Score = 300 (110.7 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 86/239 (35%), Positives = 122/239 (51%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P + ITEL S +GKTQ LQL L+ QLP HGGL A
Sbjct: 76 PEQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQLPPRHGGLGA 135
Query: 74 SSLYLHTEFPFPMRRLHQL---SHTFR---PSNDHNPCDY---IFVQSVHSVDQLLD-IM 123
++Y+ TE FP RRL QL R P + + + IF++ VD LL +
Sbjct: 136 GAVYVCTEDAFPSRRLQQLIAQQQRLRADVPGHVISKIRFGHQIFIEHAADVDTLLQCVR 195
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
K+ + +R RL+VIDS+AA FR +FD L+ + L + L+ ++
Sbjct: 196 EKVPVLL-----ARGMARLVVIDSVAAPFRCEFDGAALALRAQRLL--ALGAELRRLSCA 248
Query: 184 FGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
F VL NQV + +E + V G G + PALGI WAN + RL R
Sbjct: 249 FRSPVLCVNQVTEAVEEQDLVAG----------PPG--MSPALGITWANQLLVRLLADR 295
Score = 82 (33.9 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 273 RSLHVVFAPHLADTSCEFEITREGVFGV 300
R+L VVFAPHL +SC + I EGV G+
Sbjct: 308 RTLRVVFAPHLPASSCSYTIAAEGVRGM 335
>UNIPROTKB|Q5ZM26 [details] [associations]
symbol:XRCC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
GeneTree:ENSGT00550000074609 HOGENOM:HOG000239162 KO:K10880
CTD:7517 HOVERGEN:HBG054179 OMA:INQVTEA OrthoDB:EOG47D9GS
EMBL:AADN02003784 EMBL:AJ719558 IPI:IPI00684938
RefSeq:NP_001006489.1 UniGene:Gga.3684 STRING:Q5ZM26
Ensembl:ENSGALT00000032496 GeneID:423485 KEGG:gga:423485
InParanoid:Q5ZM26 NextBio:20825955 Uniprot:Q5ZM26
Length = 347
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 104/294 (35%), Positives = 146/294 (49%)
Query: 18 EKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLY 77
+K ++GC ++D L GGIP ITEL ES +GKTQ LQL L Q P +GGL + ++Y
Sbjct: 80 QKLSLGCSVLDDLLKGGIPLVGITELAGESSAGKTQIGLQLCLCVQYPYRYGGLESGAVY 139
Query: 78 LHTEFPFPMRRLHQL---SHTFR---PSNDHNPCDY---IFVQSVHSVDQLLDIMPKIES 128
+ TE FP +RL QL H R P + IFV+ +D + + K S
Sbjct: 140 ICTEDAFPSKRLQQLIAQQHKLRADVPPEIIQKIRFGNSIFVEHAADLDTFHNCITKRLS 199
Query: 129 FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAV 188
+ +R +RL+VIDSIAALFR +F + LK R F L ++ F +
Sbjct: 200 LLL----TRGMVRLVVIDSIAALFRCEFGASDSVLKARYLQTF--GAQLHGLSTRFRTPI 253
Query: 189 LVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP-ICPALGIAWANCVNSRLFLSRNEDFV 247
+ NQV D + +E C YS+ + PALGI WAN + RL +SR
Sbjct: 254 MCINQVTDAVSESEAAQ--------CSYSTADSRVSPALGITWANQLLMRLMVSR----- 300
Query: 248 VRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
V + + G V + + R+L VVFAPHL + C F + EGV G++
Sbjct: 301 VPQPEPSPGAVSHHPA-------SMRTLRVVFAPHLPPSFCCFTVKLEGVKGMK 347
>ZFIN|ZDB-GENE-050320-116 [details] [associations]
symbol:xrcc3 "X-ray repair complementing defective
repair in Chinese hamster cells 3" species:7955 "Danio rerio"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 ZFIN:ZDB-GENE-050320-116
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 EMBL:BX255905
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HOVERGEN:HBG054179
OMA:INQVTEA IPI:IPI00494088 UniGene:Dr.75660
Ensembl:ENSDART00000010564 InParanoid:Q5TZD9 Uniprot:Q5TZD9
Length = 352
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 89/235 (37%), Positives = 129/235 (54%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + CP++D + GG+P ITEL ES +GKTQFCLQL LS Q P HGGL++ ++Y+
Sbjct: 81 RLSFACPVLDGLMRGGLPLRGITELAGESAAGKTQFCLQLCLSVQYPQEHGGLNSGAVYI 140
Query: 79 HTEFPFPMRRLHQL-SHTFRPSNDHNPCDYIFVQSVHSVDQL-LDIMPKIESFIKNSSNS 136
TE FP++RL QL + R D P + S+ D + ++ +E+ ++ +
Sbjct: 141 CTEDSFPIKRLRQLITQQPRLRPDLPPA---LIHSLRFSDNIYIEHAADLEA-LQVCVSQ 196
Query: 137 RLPI-------RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVL 189
R+P+ RL+V+DS+AALFRS+F D+ +RS S L ++ + VL
Sbjct: 197 RVPVLLKRGLVRLLVVDSVAALFRSEFQ--ADEAVQRSRHLLAFSSTLHRLSHTYAAPVL 254
Query: 190 VTNQVVDLME-PNEGVNGLRVGNLGCLYSS-GRPICPALGIAWANCVNSRLFLSR 242
NQV D+++ PN G C Y G + PALGIAWAN V RL L R
Sbjct: 255 CVNQVTDVVDGPNPG---------RCDYGLVGSKVLPALGIAWANQVMVRLMLRR 300
>MGI|MGI:1921585 [details] [associations]
symbol:Xrcc3 "X-ray repair complementing defective repair in
Chinese hamster cells 3" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] InterPro:IPR020588 PROSITE:PS50162 MGI:MGI:1921585
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0005759
GO:GO:0003677 GO:GO:0006281 GO:GO:0006310 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HOGENOM:HOG000239162
KO:K10880 CTD:7517 HOVERGEN:HBG054179 OMA:INQVTEA OrthoDB:EOG47D9GS
EMBL:AK014491 IPI:IPI00110210 RefSeq:NP_083151.1 UniGene:Mm.19082
ProteinModelPortal:Q9CXE6 SMR:Q9CXE6 STRING:Q9CXE6
PhosphoSite:Q9CXE6 PRIDE:Q9CXE6 DNASU:74335
Ensembl:ENSMUST00000021715 GeneID:74335 KEGG:mmu:74335
UCSC:uc007pdz.1 InParanoid:Q9CXE6 NextBio:340475 Bgee:Q9CXE6
Genevestigator:Q9CXE6 GermOnline:ENSMUSG00000021287 Uniprot:Q9CXE6
Length = 349
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 87/244 (35%), Positives = 129/244 (52%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D+ LGGG+P IT L S +GKTQ LQL L+ Q P +GGL A
Sbjct: 76 PEQHQRLSLGCPVLDQFLGGGLPLEGITGLAGCSSAGKTQLALQLCLAVQFPRQYGGLEA 135
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNP---------CDYIFVQSVHSVDQLLDIMP 124
++Y+ TE FP +RL QL R P ++IF++ VD LL+ +
Sbjct: 136 GAVYICTEDAFPSKRLWQLIAQQRRLRTDAPEELIEKIRFSNHIFIEHAADVDTLLECVS 195
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K + SR RL+V+DSIAA FR +F ++ + L + L+ ++ F
Sbjct: 196 KKVPILL----SRGMARLVVVDSIAAPFRCEFHLQASAIRAK--LLLSLGATLRRLSSTF 249
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR-N 243
VL NQV D++E + V+ +LG +S + PALGI WAN + RL + R +
Sbjct: 250 RSPVLCINQVTDMVEDQQSVSR----SLG---ASEERLSPALGITWANQLLMRLMVDRTH 302
Query: 244 EDFV 247
ED V
Sbjct: 303 EDDV 306
>RGD|1306849 [details] [associations]
symbol:Xrcc3 "X-ray repair complementing defective repair in
Chinese hamster cells 3" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0010033 "response to organic substance"
evidence=IEP] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1306849
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0003677 GO:GO:0006281 GO:GO:0010033 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 OrthoDB:EOG47D9GS
IPI:IPI00368372 Ensembl:ENSRNOT00000016208 UCSC:RGD:2325124
Uniprot:D4A5N4
Length = 349
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 83/244 (34%), Positives = 126/244 (51%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D+ LGGG+P IT L S +GKTQ LQL L+ Q P +GGL A
Sbjct: 76 PEQHQRLSLGCPVLDQFLGGGLPLEGITGLAGRSSAGKTQLALQLCLAVQFPRQYGGLEA 135
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCD---------YIFVQSVHSVDQLLDIMP 124
++Y+ TE FP +RL QL + P + +IF++ VD L++ +
Sbjct: 136 GAVYICTEDAFPSKRLWQLIEQLQELRTDVPGEVTQKIRFGNHIFIEHAADVDTLMECVS 195
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K + SR RL+V+DSIAA FR +F ++ + + L+ ++ F
Sbjct: 196 KRVPILL----SRGMARLVVVDSIAAPFRCEFHLQASAVRAKHL--HSLGAALQRLSSTF 249
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR-N 243
VL NQV +++E E GL CL + + PALGI WAN + +L + R +
Sbjct: 250 RSPVLCINQVTEMVEDQESA-GL------CLRAWEERLSPALGITWANQLLMQLMVDRIH 302
Query: 244 EDFV 247
ED V
Sbjct: 303 EDSV 306
>UNIPROTKB|G4MNW7 [details] [associations]
symbol:MGG_06985 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
EMBL:CM001231 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
KO:K10958 RefSeq:XP_003709736.1 ProteinModelPortal:G4MNW7
EnsemblFungi:MGG_06985T0 GeneID:2685158 KEGG:mgr:MGG_06985
Uniprot:G4MNW7
Length = 548
Score = 240 (89.5 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 67/182 (36%), Positives = 97/182 (53%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P +D LGGGIP +TE+ ESG+GKTQF L L L+ QLP HG L ++Y+ TE
Sbjct: 142 PELDAALGGGIPTGYVTEITGESGAGKTQFLLSLLLAVQLPPPHG-LGRKAMYIPTEAAL 200
Query: 85 PMRRLHQL--SHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK--IESFIKNSSNSRLPI 140
RR+ Q+ ++ S P + S+ S+ L DI + I SF +R +
Sbjct: 201 STRRVAQMLAANPLLLSASPRPS----LDSILSLQPLGDIEAQDHILSFQVPLEAARRNV 256
Query: 141 RLIVIDSIAALFRSDFD---NTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDL 197
LI++DS+AA FR+++D + L RS ++ L+ +A LAV+V NQV D
Sbjct: 257 GLIILDSVAANFRAEYDAAGSRSTGLAARSAELVRLGMQLRNLARSLNLAVVVANQVADR 316
Query: 198 ME 199
E
Sbjct: 317 FE 318
Score = 80 (33.2 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 25/89 (28%), Positives = 43/89 (48%)
Query: 217 SSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLH 276
S+G P+LG+ W+ +++R+ L + + ++ G G + RR +
Sbjct: 442 SAGNHKTPSLGLVWSTQISARIALLKKP--IYGRSRYQGDDDDGDGMNSAM-HSWRRWMK 498
Query: 277 VVFAPHLA------DTSCEFEITREGVFG 299
VVFAPH+A D + E+EI G+ G
Sbjct: 499 VVFAPHVAPSGPGLDGAVEYEIYSGGLKG 527
>FB|FBgn0003480 [details] [associations]
symbol:spn-B "spindle B" species:7227 "Drosophila
melanogaster" [GO:0008298 "intracellular mRNA localization"
evidence=IMP;TAS] [GO:0009951 "polarity specification of
dorsal/ventral axis" evidence=IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IGI] [GO:0009949 "polarity
specification of anterior/posterior axis" evidence=IMP] [GO:0048477
"oogenesis" evidence=IGI;TAS] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0006417 "regulation of translation" evidence=TAS]
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0007131
"reciprocal meiotic recombination" evidence=TAS] [GO:0006281 "DNA
repair" evidence=ISS;NAS] [GO:0030261 "chromosome condensation"
evidence=TAS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0009994 "oocyte differentiation" evidence=NAS] [GO:0006302
"double-strand break repair" evidence=TAS] [GO:0007126 "meiosis"
evidence=TAS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
EMBL:AE014297 GO:GO:0005524 GO:GO:0009949 GO:GO:0007294
GO:GO:0006417 GO:GO:0003677 GO:GO:0006200 GO:GO:0006302
GO:GO:0030261 GO:GO:0008298 GO:GO:0030717 GO:GO:0007131
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HSSP:O74036
GO:GO:0009951 KO:K10880 OMA:YSPETPN EMBL:AF069531 EMBL:BT044133
EMBL:FJ219434 EMBL:FJ219442 EMBL:FJ219445 EMBL:FJ219448
RefSeq:NP_476740.1 UniGene:Dm.4725 SMR:O77135 IntAct:O77135
MINT:MINT-763026 STRING:O77135 EnsemblMetazoa:FBtr0082933
GeneID:41746 KEGG:dme:Dmel_CG3325 UCSC:CG3325-RA CTD:41746
FlyBase:FBgn0003480 HOGENOM:HOG000012350 InParanoid:O77135
OrthoDB:EOG49CNQT GenomeRNAi:41746 NextBio:825371 Uniprot:O77135
Length = 341
Score = 232 (86.7 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 73/218 (33%), Positives = 107/218 (49%)
Query: 4 PMTPQNLLDNPLTT---EKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
P + +L PL + + GC +DRC GGG+ ITEL +G GKTQ LQL+L
Sbjct: 70 PQSADSLF-KPLVNVRWSRVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSL 128
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVD 117
QLP GGL Y+ TE FP RRL Q+S P + N IFV++ +
Sbjct: 129 CVQLPRELGGLGKGVAYICTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAE 188
Query: 118 QLLD-IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGM 176
LL ++ +I ++ I LI+IDS+AA+FR +D +R+ +++
Sbjct: 189 PLLACVINRIPRLMQQHG-----IGLIIIDSVAAIFR-----LYNDYLERARHMRRLADA 238
Query: 177 LKAMAVGFGLAVLVTNQVVDLMEPNE-GVNGLRVGNLG 213
L + A + AV+ NQV +E GL+ +LG
Sbjct: 239 LLSYADKYNCAVVCVNQVATRDGQDEIPCLGLQWAHLG 276
Score = 70 (29.7 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 24/82 (29%), Positives = 40/82 (48%)
Query: 219 GRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVV 278
G+ P LG+ WA+ +RL +SR V ++++M + + T R L ++
Sbjct: 261 GQDEIPCLGLQWAHLGRTRLRVSR----VPKQHRM---------GDQLI---TVRKLEIL 304
Query: 279 FAPHLADTSCEFEITREGVFGV 300
++P + EF IT EGV V
Sbjct: 305 YSPETPNDFAEFLITAEGVVNV 326
>MGI|MGI:1099436 [details] [associations]
symbol:Rad51b "RAD51 homolog B" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
MGI:MGI:1099436 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5890 HOVERGEN:HBG061476 KO:K10869 OMA:CIMMSVL
EMBL:U92068 EMBL:AK015771 EMBL:AK032913 IPI:IPI00331068
IPI:IPI00399712 RefSeq:NP_001239491.1 RefSeq:NP_033040.2
UniGene:Mm.341756 ProteinModelPortal:O35719 SMR:O35719
MINT:MINT-205633 STRING:O35719 PhosphoSite:O35719 PRIDE:O35719
Ensembl:ENSMUST00000079533 GeneID:19363 KEGG:mmu:19363
UCSC:uc007oai.1 UCSC:uc007oaj.1 GeneTree:ENSGT00550000074609
HOGENOM:HOG000154062 InParanoid:O35719 OrthoDB:EOG4G4GQP
NextBio:296429 Bgee:O35719 CleanEx:MM_RAD51L1 Genevestigator:O35719
Uniprot:O35719
Length = 350
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 69/223 (30%), Positives = 122/223 (54%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+PC S+TE+ G GKTQFC+ +++ A LP+S GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVPCGSLTEITGPPGCGKTQFCIMMSVLATLPTSLGGLEGAVVYIDTESAFTA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L ++ ++ES ++ S+ ++L+
Sbjct: 150 ERLVEIAESRFPQYFNTEEKLLLTSSRVHLCRELTCEGLLQRLES-LEEEIISK-GVKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME--- 199
++DSIA++ R +FD + ++K+R+ K + +LK +A F + V++TNQ+ +
Sbjct: 208 IVDSIASVVRKEFDPKLQGNIKERNKFLGKGASLLKYLAGEFSIPVILTNQITTHLSGAL 267
Query: 200 PNEGVNGLRVGNLGCLYSSGRPIC--PALGIAWANCVNSRLFL 240
P++ +L + C ALG W +CVN+RL L
Sbjct: 268 PSQADLVSPADDLSLSEGTSGSSCLVAALGNTWGHCVNTRLIL 310
>UNIPROTKB|O15315 [details] [associations]
symbol:RAD51B "DNA repair protein RAD51 homolog 2"
species:9606 "Homo sapiens" [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=TAS] [GO:0006310 "DNA
recombination" evidence=TAS] [GO:0007131 "reciprocal meiotic
recombination" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0007596 "blood coagulation" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_604
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
GO:GO:0005524 GO:GO:0005654 EMBL:CH471061 GO:GO:0003677
GO:GO:0007596 GO:GO:0006281 GO:GO:0007131 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 MIM:150699 EMBL:U92074 EMBL:U84138 EMBL:Y15571
EMBL:BX161515 EMBL:BX248061 EMBL:BX248766 EMBL:DQ160197
EMBL:AC004518 EMBL:CR536560 EMBL:BC030219 EMBL:AY138857
EMBL:AY138858 EMBL:AY138859 IPI:IPI00006105 IPI:IPI00220523
IPI:IPI00386489 IPI:IPI00386490 IPI:IPI00395987 RefSeq:NP_002868.1
RefSeq:NP_598193.2 RefSeq:NP_598194.1 UniGene:Hs.172587
ProteinModelPortal:O15315 SMR:O15315 IntAct:O15315 MINT:MINT-224850
STRING:O15315 PhosphoSite:O15315 PRIDE:O15315 DNASU:5890
Ensembl:ENST00000390683 Ensembl:ENST00000471583
Ensembl:ENST00000487270 Ensembl:ENST00000488612 GeneID:5890
KEGG:hsa:5890 UCSC:uc001xkd.3 UCSC:uc001xke.3 UCSC:uc001xkf.2
UCSC:uc001xkg.2 UCSC:uc010aqr.3 CTD:5890 GeneCards:GC14P068287
H-InvDB:HIX0022466 HGNC:HGNC:9822 HPA:CAB016191 MIM:602948
neXtProt:NX_O15315 PharmGKB:PA34178 HOVERGEN:HBG061476
InParanoid:O15315 KO:K10869 OMA:CIMMSVL PhylomeDB:O15315
ChiTaRS:RAD51B GenomeRNAi:5890 NextBio:22908 ArrayExpress:O15315
Bgee:O15315 Genevestigator:O15315 Uniprot:O15315
Length = 384
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 72/229 (31%), Positives = 126/229 (55%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L +++ +IES ++ S+ I+L+
Sbjct: 150 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIES-LEEEIISK-GIKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV------- 195
++DS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQ+
Sbjct: 208 ILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGAL 267
Query: 196 ----DLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G SS + ALG W++ VN+RL L
Sbjct: 268 ASQADLVSPADDLS-LSEGTSG---SSC--VIAALGNTWSHSVNTRLIL 310
>UNIPROTKB|C9JYJ0 [details] [associations]
symbol:RAD51B "DNA repair protein RAD51 homolog 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
HGNC:HGNC:9822 ChiTaRS:RAD51B HOGENOM:HOG000154062 EMBL:AL121595
EMBL:AL121820 EMBL:AL122013 EMBL:AL132986 EMBL:AL133313
EMBL:AL133370 EMBL:AL136294 EMBL:AL157915 EMBL:AL589168
IPI:IPI00945688 ProteinModelPortal:C9JYJ0 SMR:C9JYJ0 STRING:C9JYJ0
Ensembl:ENST00000487861 ArrayExpress:C9JYJ0 Bgee:C9JYJ0
Uniprot:C9JYJ0
Length = 425
Score = 267 (99.0 bits), Expect = 7.1e-23, P = 7.1e-23
Identities = 72/229 (31%), Positives = 126/229 (55%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L +++ +IES ++ S+ I+L+
Sbjct: 150 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIES-LEEEIISK-GIKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV------- 195
++DS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQ+
Sbjct: 208 ILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGAL 267
Query: 196 ----DLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G SS + ALG W++ VN+RL L
Sbjct: 268 ASQADLVSPADDLS-LSEGTSG---SSC--VIAALGNTWSHSVNTRLIL 310
>UNIPROTKB|E1BE93 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5890 KO:K10869 OMA:CIMMSVL
GeneTree:ENSGT00550000074609 EMBL:DAAA02029475 EMBL:DAAA02029476
EMBL:DAAA02029477 EMBL:DAAA02029478 IPI:IPI00729339
RefSeq:NP_001180066.1 UniGene:Bt.25511 Ensembl:ENSBTAT00000025252
GeneID:617007 KEGG:bta:617007 NextBio:20900440 Uniprot:E1BE93
Length = 364
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 70/229 (30%), Positives = 125/229 (54%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 104 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 163
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + S VH +L +++ +IES ++ S+ ++L+
Sbjct: 164 ERLVEIAESRFPRYFDTEEKLLLTSSKVHLYRELSCDEVLQRIES-LEEEIISK-GVKLV 221
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV------- 195
+IDS+A++ R +FD + ++++R+ + + LK +A F + V++TNQ+
Sbjct: 222 IIDSVASVVRKEFDTQLQGNVRERNKFLAREAASLKYLAEEFSIPVILTNQITTHLSGAL 281
Query: 196 ----DLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G SS + ALG W++ VN+RL L
Sbjct: 282 ASQADLVSPADDLS-LSEGTSG---SSC--LTAALGNTWSHSVNTRLIL 324
>SGD|S000000897 [details] [associations]
symbol:RAD51 "Strand exchange protein" species:4932
"Saccharomyces cerevisiae" [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA;IDA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0000722 "telomere maintenance via
recombination" evidence=IMP] [GO:0045002 "double-strand break
repair via single-strand annealing" evidence=IMP] [GO:0030491
"heteroduplex formation" evidence=IDA] [GO:0000709 "meiotic joint
molecule formation" evidence=IMP] [GO:0000150 "recombinase
activity" evidence=IDA] [GO:0000228 "nuclear chromosome"
evidence=IDA] [GO:0042148 "strand invasion" evidence=IDA]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
SGD:S000000897 GO:GO:0005524 GO:GO:0003684 EMBL:BK006939
GO:GO:0003697 GO:GO:0000724 GO:GO:0000794 EMBL:U18839 GO:GO:0000722
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 GO:GO:0000709 RefSeq:NP_011021.3
GeneID:856831 KEGG:sce:YER095W KO:K04482 EMBL:M88470
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 OrthoDB:EOG41CB4Z GO:GO:0042148 EMBL:X64270
EMBL:D10023 PIR:A44348 RefSeq:NP_011026.3 PDB:1SZP PDB:3LDA
PDBsum:1SZP PDBsum:3LDA ProteinModelPortal:P25454 SMR:P25454
DIP:DIP-195N IntAct:P25454 MINT:MINT-386096 STRING:P25454
PaxDb:P25454 PeptideAtlas:P25454 EnsemblFungi:YER095W GeneID:856837
KEGG:sce:YER100W CYGD:YER095w KO:K04554 EvolutionaryTrace:P25454
NextBio:983130 Genevestigator:P25454 GermOnline:YER095W
GO:GO:0030491 Uniprot:P25454
Length = 400
Score = 224 (83.9 bits), Expect = 9.9e-21, Sum P(2) = 9.9e-21
Identities = 61/175 (34%), Positives = 90/175 (51%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGG+ SITEL E +GK+Q C L ++ Q+P GG LY+ T
Sbjct: 161 TTGSKNLDTLLGGGVETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDT 220
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F D + + + ++ D L ++ ++ + S SR
Sbjct: 221 EGTFRPVRLVSIAQRFGLDPD-DALNNVAYARAYNADHQLRLL---DAAAQMMSESRFS- 275
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
LIV+DS+ AL+R+DF +L R K L+ +A FG+AV+VTNQVV
Sbjct: 276 -LIVVDSVMALYRTDFSGR-GELSARQMHLAKFMRALQRLADQFGVAVVVTNQVV 328
Score = 43 (20.2 bits), Expect = 9.9e-21, Sum P(2) = 9.9e-21
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 272 RRSLHVVFAPHLADTSCEFEITREGV 297
+R VV +P L + C F I +GV
Sbjct: 367 QRLCKVVDSPCLPEAECVFAIYEDGV 392
>UNIPROTKB|E1BVI8 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 OMA:CIMMSVL GeneTree:ENSGT00550000074609
EMBL:AADN02003180 IPI:IPI00812156 Ensembl:ENSGALT00000015453
Uniprot:E1BVI8
Length = 275
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 56/166 (33%), Positives = 97/166 (58%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D+ L GGIPC S+TEL + G GKTQFC+ +++ A LP S GGL + +Y+ TE F
Sbjct: 90 LDKVLHGGIPCGSLTELTSPPGCGKTQFCITMSVLATLPVSMGGLDGAVIYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSN-DHNPCDYIFVQSVHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ P+ D + + +S+H +L ++ +I+S + + + I+LI
Sbjct: 150 ERLIEIAGNRFPTYFDSDEKLFCMTRSIHLYRELTCDSVLKRIKSLEEEIISKK--IKLI 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAV 188
+IDS+A++ R +FD + +L +RS + + +LK +A F + V
Sbjct: 208 IIDSVASVVRKEFDTKLQGNLAERSNFLARGASLLKYVAEEFSIPV 253
>ZFIN|ZDB-GENE-040426-2750 [details] [associations]
symbol:rad51b "RAD51 homolog B (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 ZFIN:ZDB-GENE-040426-2750
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5890 HOVERGEN:HBG061476 KO:K10869
HOGENOM:HOG000154062 HSSP:O74036 EMBL:BC052122 IPI:IPI00506696
RefSeq:NP_998577.1 UniGene:Dr.123796 ProteinModelPortal:Q7ZTX4
PRIDE:Q7ZTX4 GeneID:406721 KEGG:dre:406721 InParanoid:Q7ZTX4
NextBio:20818241 ArrayExpress:Q7ZTX4 Bgee:Q7ZTX4 Uniprot:Q7ZTX4
Length = 373
Score = 236 (88.1 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 68/233 (29%), Positives = 121/233 (51%)
Query: 18 EKC-TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSL 76
E C + P +DR L GG+P ++TE+ SG GKTQ C+ L++ A LP S GGL + +
Sbjct: 76 ELCFSTSLPALDRLLHGGLPRGALTEVTGPSGCGKTQLCMMLSVLATLPKSLGGLDSGVI 135
Query: 77 YLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNS 133
Y+ TE F RL +++ + P + + + VH +L D++ ++E ++
Sbjct: 136 YIDTESAFSAERLVEMAQSRFPEFFSVKERLLEMAARVHLFRELTCQDVLKRLERLEEDI 195
Query: 134 SNSRLPIRLIVIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTN 192
R L+++DS+A++ R +FD ++ +L RS + + +LK ++ F + V++TN
Sbjct: 196 IACRAG--LVILDSVASVVRKEFDTSLPGNLTHRSNFLGQEAAVLKYLSQEFCIPVVLTN 253
Query: 193 QVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
Q+ + + SG + ALG W++ VN+RL + + ED
Sbjct: 254 QITTHVGEKLHCPQWNQTDASFEEDSGF-VTAALGNTWSHSVNTRLIV-QYED 304
>RGD|1560681 [details] [associations]
symbol:Rad51b "RAD51 homolog B (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1560681
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 GeneTree:ENSGT00550000074609
OrthoDB:EOG4G4GQP IPI:IPI00367665 Ensembl:ENSRNOT00000016459
UCSC:RGD:1560681 Uniprot:D4A4Y7
Length = 258
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 54/172 (31%), Positives = 98/172 (56%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T+G +D L GG+PC S+TE+ G GKTQFC+ +++ A LP+ GGL + LY+ T
Sbjct: 86 TLGA--LDEALHGGVPCGSLTEVTGPPGCGKTQFCIMMSVLATLPTRLGGLEGAVLYIDT 143
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSR 137
E F RL +++ + P + + S VH +L ++ ++ES ++ S+
Sbjct: 144 ESAFTAERLVEIAESRFPQYFNTEEKLLLTSSRVHLCQELTCEGLLQRLES-LEEEIISK 202
Query: 138 LPIRLIVIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAV 188
++L+++DSIA++ R +FD + ++K+R+ K + +LK ++ F + V
Sbjct: 203 -GVKLVIVDSIASVVRKEFDPQLQGNIKERNKFLGKGASLLKYLSGEFSVPV 253
>GENEDB_PFALCIPARUM|MAL8P1.76 [details] [associations]
symbol:MAL8P1.76 "meiotic recombination protein
dmc1-like protein" species:5833 "Plasmodium falciparum" [GO:0000794
"condensed nuclear chromosome" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0003677 GO:GO:0006281 GO:GO:0000794 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 EMBL:AL844507
ProtClustDB:PTZ00035 RefSeq:XP_001349356.2
ProteinModelPortal:Q8IB05 EnsemblProtists:MAL8P1.76:mRNA
GeneID:2655426 KEGG:pfa:MAL8P1.76 EuPathDB:PlasmoDB:PF3D7_0816800
Uniprot:Q8IB05
Length = 347
Score = 212 (79.7 bits), Expect = 4.7e-18, Sum P(2) = 4.7e-18
Identities = 58/191 (30%), Positives = 91/191 (47%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T L+ K T G + D+ LGGGI ITEL E+ GKTQ C L ++AQL
Sbjct: 95 ITANELVQKRSKVLKITTGSTVFDQTLGGGIESMCITELFGENRCGKTQVCHTLAVTAQL 154
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMP 124
P S G + Y+ TE F ++ +++ + + D I + + L ++
Sbjct: 155 PKSLNGGNGKVCYIDTEGTFRPEKVCKIAERYGLDGEA-VLDNILYARAFTHEHLYQLLA 213
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
I + P L+V+DSI +LFR DF +L +R K +L ++ F
Sbjct: 214 -----ISAAKMCEEPFALLVVDSIISLFRVDFSGR-GELSERQQKLNKTMSILSKLSEQF 267
Query: 185 GLAVLVTNQVV 195
+A+L+TNQV+
Sbjct: 268 NIAILITNQVM 278
Score = 47 (21.6 bits), Expect = 4.7e-18, Sum P(2) = 4.7e-18
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 246 FVVRENQMVNGGVGGSGSEDFVCRRT----RRSLHVVFAPHLADTSCEFEITREGV 297
F+ + V G V G S + R +R V AP+L + C F+++ +GV
Sbjct: 287 FIANPMKPVGGHVIGHASTIRLSLRKGKGDQRVCKVYDAPNLPEVECIFQLSDKGV 342
>UNIPROTKB|Q8IB05 [details] [associations]
symbol:MAL8P1.76 "Meiotic recombination protein dmc1-like
protein" species:36329 "Plasmodium falciparum 3D7" [GO:0000794
"condensed nuclear chromosome" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0003677 GO:GO:0006281 GO:GO:0000794 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 EMBL:AL844507
ProtClustDB:PTZ00035 RefSeq:XP_001349356.2
ProteinModelPortal:Q8IB05 EnsemblProtists:MAL8P1.76:mRNA
GeneID:2655426 KEGG:pfa:MAL8P1.76 EuPathDB:PlasmoDB:PF3D7_0816800
Uniprot:Q8IB05
Length = 347
Score = 212 (79.7 bits), Expect = 4.7e-18, Sum P(2) = 4.7e-18
Identities = 58/191 (30%), Positives = 91/191 (47%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T L+ K T G + D+ LGGGI ITEL E+ GKTQ C L ++AQL
Sbjct: 95 ITANELVQKRSKVLKITTGSTVFDQTLGGGIESMCITELFGENRCGKTQVCHTLAVTAQL 154
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMP 124
P S G + Y+ TE F ++ +++ + + D I + + L ++
Sbjct: 155 PKSLNGGNGKVCYIDTEGTFRPEKVCKIAERYGLDGEA-VLDNILYARAFTHEHLYQLLA 213
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
I + P L+V+DSI +LFR DF +L +R K +L ++ F
Sbjct: 214 -----ISAAKMCEEPFALLVVDSIISLFRVDFSGR-GELSERQQKLNKTMSILSKLSEQF 267
Query: 185 GLAVLVTNQVV 195
+A+L+TNQV+
Sbjct: 268 NIAILITNQVM 278
Score = 47 (21.6 bits), Expect = 4.7e-18, Sum P(2) = 4.7e-18
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 246 FVVRENQMVNGGVGGSGSEDFVCRRT----RRSLHVVFAPHLADTSCEFEITREGV 297
F+ + V G V G S + R +R V AP+L + C F+++ +GV
Sbjct: 287 FIANPMKPVGGHVIGHASTIRLSLRKGKGDQRVCKVYDAPNLPEVECIFQLSDKGV 342
>TAIR|locus:2147092 [details] [associations]
symbol:RAD51 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA repair"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010332 "response to gamma radiation" evidence=IEP;RCA]
[GO:0006302 "double-strand break repair" evidence=RCA;IMP]
[GO:0006259 "DNA metabolic process" evidence=IDA;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0005694 "chromosome" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA] [GO:0006261 "DNA-dependent
DNA replication" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007126 "meiosis" evidence=RCA] [GO:0009555
"pollen development" evidence=RCA] [GO:0010212 "response to
ionizing radiation" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0016568 "chromatin modification"
evidence=RCA] [GO:0031047 "gene silencing by RNA" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA] [GO:0045003
"double-strand break repair via synthesis-dependent strand
annealing" evidence=IDA] [GO:0009314 "response to radiation"
evidence=NAS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163
SMART:SM00278 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0003684
GO:GO:0010332 EMBL:AF296834 GO:GO:0045003 SUPFAM:SSF47794
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 KO:K04482 EMBL:U43652 EMBL:AJ001100 EMBL:U43528
IPI:IPI00532326 RefSeq:NP_568402.1 UniGene:At.110
ProteinModelPortal:P94102 SMR:P94102 DIP:DIP-31780N IntAct:P94102
STRING:P94102 EnsemblPlants:AT5G20850.1 GeneID:832208
KEGG:ath:AT5G20850 GeneFarm:4757 TAIR:At5g20850 InParanoid:P94102
OMA:MMAESRY PhylomeDB:P94102 ProtClustDB:PLN03186
Genevestigator:P94102 GermOnline:AT5G20850 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 Uniprot:P94102
Length = 342
Score = 212 (79.7 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 57/175 (32%), Positives = 88/175 (50%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GGI SITEL E SGKTQ C L ++ QLP GG ++Y+
Sbjct: 106 TSGSRELDKVLEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKAMYIDA 165
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F +RL Q++ F N + + + ++ D ++ + S + +
Sbjct: 166 EGTFRPQRLLQIADRFG-LNGADVLENVAYARAYNTDHQSRLLLEAASMMIETR-----F 219
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 220 ALLIVDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVITNQVV 273
Score = 46 (21.3 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 269 RRTRRSLHVVFAPHLADTSCEFEITREGV 297
R R V+ +P L + F+I+ EGV
Sbjct: 309 RAEERICKVISSPCLPEAEARFQISTEGV 337
>UNIPROTKB|E2R3P3 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
OMA:CIMMSVL GeneTree:ENSGT00550000074609 EMBL:AAEX03005799
Ensembl:ENSCAFT00000026122 Uniprot:E2R3P3
Length = 272
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 51/166 (30%), Positives = 94/166 (56%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGDVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQL-LD-IMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L D ++ +IES ++ S+ ++L+
Sbjct: 150 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELSCDAVLQRIES-LEEEIISK-GVKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAV 188
+IDS+A++ R +FD + ++++R+ + + LK +A F + V
Sbjct: 208 IIDSVASVVRKEFDTQLQGNMRERNKFLAREAASLKYLAEEFSIPV 253
>UNIPROTKB|F1SA21 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
OMA:CIMMSVL GeneTree:ENSGT00550000074609 EMBL:CT797462
Ensembl:ENSSSCT00000002560 Uniprot:F1SA21
Length = 252
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 49/164 (29%), Positives = 91/164 (55%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPIDMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIF-VQSVHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + V VH +L +++ +IES ++ S+ ++L+
Sbjct: 150 ERLVEMAESRFPRYFSTEEKLLLTVSKVHLYRELSCDEVLQRIES-LEEEIISK-GVKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGL 186
+IDS+A++ R +FD + ++++R+ + + LK +A F +
Sbjct: 208 IIDSVASVVRKEFDTQLQGNMRERNKFLAREAASLKYLAEEFSI 251
>TAIR|locus:2084558 [details] [associations]
symbol:DMC1 "DISRUPTION OF MEIOTIC CONTROL 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA;IDA] [GO:0006281
"DNA repair" evidence=ISS] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA;ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0051026 "chiasma assembly" evidence=IGI;IMP] [GO:0006302
"double-strand break repair" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA;TAS] [GO:0010212 "response to ionizing radiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0006259 EMBL:AP001300 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0000733 GO:GO:0008094 GO:GO:0051026 EMBL:D45415 EMBL:U76670
EMBL:BT023447 IPI:IPI00517160 PIR:JC4092 RefSeq:NP_188928.2
UniGene:At.50216 ProteinModelPortal:Q39009 SMR:Q39009 IntAct:Q39009
MINT:MINT-5222993 STRING:Q39009 EnsemblPlants:AT3G22880.1
GeneID:821860 KEGG:ath:AT3G22880 GeneFarm:4784 TAIR:At3g22880
eggNOG:COG0468 HOGENOM:HOG000227426 InParanoid:Q39009 KO:K10872
OMA:FFQDIDL PhylomeDB:Q39009 ProtClustDB:PLN03187
Genevestigator:Q39009 GermOnline:AT3G22880 GO:GO:0000707
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 Uniprot:Q39009
Length = 344
Score = 205 (77.2 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 63/203 (31%), Positives = 100/203 (49%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT + L + K T GC +D LGGGI ++ITE E SGKTQ L ++ QL
Sbjct: 93 MTGSDALIKRKSVVKITTGCQALDDLLGGGIETSAITEAFGEFRSGKTQLAHTLCVTTQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P++ G + Y+ TE F R+ ++ F + I+ ++ H + LL
Sbjct: 153 PTNMKGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ S P R++++DSI ALFR DF + ++ L +S ++K +A
Sbjct: 213 LAAKM---------SEEPFRILIVDSIIALFRVDFTGRGELADRQQKLAQMLSRLIK-IA 262
Query: 182 VGFGLAVLVTNQVVDLMEPNEGV 204
F +AV +TNQV+ +P G+
Sbjct: 263 EEFNVAVYMTNQVI--ADPGGGM 283
Score = 48 (22.0 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 273 RSLHVVFAPHLADTSCEFEITREGV 297
R V AP+LA+ F+IT+ G+
Sbjct: 315 RVCKVYDAPNLAEAEASFQITQGGI 339
>POMBASE|SPAC644.14c [details] [associations]
symbol:rad51 "RecA family recombinase Rad51/Rhp51"
species:4896 "Schizosaccharomyces pombe" [GO:0000150 "recombinase
activity" evidence=IDA] [GO:0000711 "meiotic DNA repair synthesis"
evidence=IMP] [GO:0000723 "telomere maintenance" evidence=IGI]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISS] [GO:0000775 "chromosome, centromeric
region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=NAS]
[GO:0000794 "condensed nuclear chromosome" evidence=ISO]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003691
"double-stranded telomeric DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0006311 "meiotic gene conversion" evidence=IDA]
[GO:0006312 "mitotic recombination" evidence=IGI] [GO:0007533
"mating type switching" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0030998 "linear element" evidence=IDA]
[GO:0033170 "protein-DNA loading ATPase activity" evidence=TAS]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=TAS] [GO:0042148 "strand invasion" evidence=TAS]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=IDA]
[GO:0051260 "protein homooligomerization" evidence=IPI]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
PomBase:SPAC644.14c GO:GO:0005524 GO:GO:0005635 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003684 GO:GO:0051260 GO:GO:0000790
GO:GO:0000724 GO:GO:0006312 GO:GO:0000723 SUPFAM:SSF47794
GO:GO:0042138 GO:GO:0043047 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 GO:GO:0006311 GO:GO:0007533
GO:GO:0030998 GO:GO:0003691 GO:GO:0000711 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:D13805 EMBL:Z22691 EMBL:Z24756 PIR:S42107
ProteinModelPortal:P36601 SMR:P36601 DIP:DIP-29235N IntAct:P36601
MINT:MINT-239321 STRING:P36601 OrthoDB:EOG41CB4Z NextBio:20804587
GO:GO:0033170 GO:GO:0042148 Uniprot:P36601
Length = 365
Score = 216 (81.1 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 58/175 (33%), Positives = 88/175 (50%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GG+ SITEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 125 TTGSKQLDTLLQGGVETGSITELFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLYIDT 184
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N D + ++ D L+++ + + + S SR
Sbjct: 185 EGTFRPVRLLAVADRYG-LNGEEVLDNVAYARAYNADHQLELLQQAANMM---SESRFS- 239
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS AL+R+DF +L R + L+ +A FG+AV++TNQVV
Sbjct: 240 -LLVVDSCTALYRTDFSGR-GELSARQMHLARFMRTLQRLADEFGIAVVITNQVV 292
>POMBASE|SPAC20H4.07 [details] [associations]
symbol:rad57 "RecA family ATPase Rad57/Rhp57"
species:4896 "Schizosaccharomyces pombe" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IGI]
[GO:0000730 "DNA recombinase assembly" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0033062 "Rhp55-Rhp57 complex" evidence=NAS]
[GO:0033170 "protein-DNA loading ATPase activity" evidence=TAS]
[GO:0042148 "strand invasion" evidence=TAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] InterPro:IPR020588
PROSITE:PS50162 PomBase:SPAC20H4.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0007131
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000730 GO:GO:0033170 GO:GO:0042148
GO:GO:0033062 EMBL:AB024744 PIR:T43507 RefSeq:NP_593627.1
ProteinModelPortal:Q9UUL2 IntAct:Q9UUL2 STRING:Q9UUL2
EnsemblFungi:SPAC20H4.07.1 GeneID:2542007 KEGG:spo:SPAC20H4.07
KO:K10958 OMA:LERRTHC OrthoDB:EOG4HTD1G NextBio:20803087
Uniprot:Q9UUL2
Length = 354
Score = 215 (80.7 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 64/219 (29%), Positives = 117/219 (53%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+ P + +T++ T G +D L GGIP +TE+ ESGSGK+QFC+QL L QL
Sbjct: 60 LQPVRCSASKVTSKYLTTGDVKLDETLHGGIPVGQLTEICGESGSGKSQFCMQLCLMVQL 119
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIM- 123
P S GG++ +++++ TE +RL +L+ + P + D + + D++ I+
Sbjct: 120 PLSLGGMNKAAVFISTESGLETKRLFELAR-YLPER-YPKADKKDIIIKNPGDRVYTILC 177
Query: 124 PKIESFIKNSSNSRLPIR-------LIVIDSIAALFRSD--FDNT------MDDLKKRSF 168
P +ES ++ +LPI L+++DS+A+ +R++ ++ + +D++ KR
Sbjct: 178 PDLESQ-EHIIQYQLPILFNRDKIGLVILDSVASNYRAELRYNRSKSHFRDLDNIAKRGN 236
Query: 169 LFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGL 207
K++ L+ +A AV++ NQV D + + GL
Sbjct: 237 QLGKLAMTLRTLAHQHEAAVVIANQVSDRIPRDYDAIGL 275
>ASPGD|ASPL0000051939 [details] [associations]
symbol:AN10145 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0033062 "Rhp55-Rhp57 complex" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0000722 "telomere maintenance via recombination" evidence=IEA]
[GO:0030491 "heteroduplex formation" evidence=IEA] [GO:0000707
"meiotic DNA recombinase assembly" evidence=IEA] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 ProteinModelPortal:C8VTV7
EnsemblFungi:CADANIAT00001591 OMA:ILSINAM Uniprot:C8VTV7
Length = 554
Score = 214 (80.4 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 59/177 (33%), Positives = 92/177 (51%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GGI +TE+ ESGSGKTQF L L L+ QLP G S++Y+ TE P
Sbjct: 112 LDTLLNGGIATGYVTEVTGESGSGKTQFLLGLLLAVQLPPPQGA-GRSAIYISTEAPLAT 170
Query: 87 RRLHQL--SHTFRPSNDHNPCDYIF-VQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLI 143
RL QL H + + + + S++++D L+ I ++ + R + L+
Sbjct: 171 NRLSQLIECHPYLSTLSREQAPSLGRILSINAMD--LESQDHILNYQLPVAIKRYNVGLV 228
Query: 144 VIDSIAALFRSDF-DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
VIDSI + +R++ + + L RS K+ ML+ +A +A++V NQV D E
Sbjct: 229 VIDSITSNYRAEHTSHDLSGLSTRSGELAKLGQMLRNLAASEDVAIVVANQVSDRFE 285
Score = 39 (18.8 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 224 PALGIAWANCVNSRLFLSR 242
P LG+ W+ + R+ L +
Sbjct: 418 PTLGLVWSTQIACRIALKK 436
>FB|FBgn0003479 [details] [associations]
symbol:spn-A "spindle A" species:7227 "Drosophila
melanogaster" [GO:0007294 "germarium-derived oocyte fate
determination" evidence=IGI] [GO:0048477 "oogenesis"
evidence=IMP;TAS] [GO:0008298 "intracellular mRNA localization"
evidence=IMP;TAS] [GO:0009951 "polarity specification of
dorsal/ventral axis" evidence=IMP] [GO:0030717 "karyosome
formation" evidence=IMP] [GO:0009949 "polarity specification of
anterior/posterior axis" evidence=IMP] [GO:0006281 "DNA repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=NAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;NAS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0009994 "oocyte differentiation" evidence=NAS]
[GO:0000075 "cell cycle checkpoint" evidence=IMP] [GO:0007143
"female meiosis" evidence=IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0045003 "double-strand break repair via synthesis-dependent
strand annealing" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0009949 GO:GO:0007294 GO:GO:0003684 GO:GO:0007143
GO:GO:0008298 GO:GO:0030717 GO:GO:0000075 GO:GO:0045003
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 KO:K04482
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:D37788 EMBL:D17726 EMBL:L41342
EMBL:BT001791 RefSeq:NP_524583.1 RefSeq:NP_733342.1 UniGene:Dm.1913
ProteinModelPortal:Q27297 SMR:Q27297 DIP:DIP-20846N IntAct:Q27297
MINT:MINT-337614 STRING:Q27297 PaxDb:Q27297 PRIDE:Q27297
EnsemblMetazoa:FBtr0085589 GeneID:43577 KEGG:dme:Dmel_CG7948
CTD:43577 FlyBase:FBgn0003479 InParanoid:Q27297 OrthoDB:EOG4P2NHW
PhylomeDB:Q27297 GenomeRNAi:43577 NextBio:834653 Bgee:Q27297
GermOnline:CG7948 GO:GO:0009951 Uniprot:Q27297
Length = 336
Score = 214 (80.4 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 56/184 (30%), Positives = 93/184 (50%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
+ G +D+ LGGGI SITE+ E GKTQ C L ++ QLP S G +Y+ T
Sbjct: 100 STGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYIDT 159
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ ++ N+ D + H+ DQ ++ + S +
Sbjct: 160 ENTFRPERLAAIAQRYK-LNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYA---- 214
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+++DS AL+RSD+ + +++ L + ML+ +A FG+AV++TNQV ++
Sbjct: 215 -LLIVDSAMALYRSDYIGRGELAARQNHLGLFLR-MLQRLADEFGVAVVITNQVTASLDG 272
Query: 201 NEGV 204
G+
Sbjct: 273 APGM 276
>SGD|S000002411 [details] [associations]
symbol:RAD57 "Protein that stimulates strand exchange"
species:4932 "Saccharomyces cerevisiae" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IPI] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0033062 "Rhp55-Rhp57
complex" evidence=IDA] [GO:0000730 "DNA recombinase assembly"
evidence=IPI] [GO:0000722 "telomere maintenance via recombination"
evidence=IMP] [GO:0045002 "double-strand break repair via
single-strand annealing" evidence=IMP] [GO:0000707 "meiotic DNA
recombinase assembly" evidence=IMP] [GO:0030491 "heteroduplex
formation" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
SGD:S000002411 GO:GO:0005524 GO:GO:0003677 EMBL:BK006938
EMBL:Z48008 GO:GO:0000722 GO:GO:0008094 eggNOG:COG0468
GO:GO:0000707 InterPro:IPR013632 Pfam:PF08423 GO:GO:0030491
GO:GO:0033062 KO:K10958 OrthoDB:EOG4HTD1G EMBL:M65061 PIR:JQ1275
RefSeq:NP_010287.1 ProteinModelPortal:P25301 SMR:P25301
DIP:DIP-4774N IntAct:P25301 MINT:MINT-480305 STRING:P25301
EnsemblFungi:YDR004W GeneID:851567 KEGG:sce:YDR004W CYGD:YDR004w
HOGENOM:HOG000141828 OMA:YITTEGD NextBio:969013
Genevestigator:P25301 GermOnline:YDR004W Uniprot:P25301
Length = 460
Score = 193 (73.0 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 59/190 (31%), Positives = 99/190 (52%)
Query: 13 NPLTTEKC-TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGL 71
+P +C T +D LGGGI + ITE+ ES +GK+Q +QL LS QL GGL
Sbjct: 92 SPDNGPECFTTADVAMDELLGGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEPAGGL 151
Query: 72 SASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDY--IFVQSVHS-VDQLLDIMPKIES 128
+Y+ TE P +RL + + RP+ + IF S + ++Q I ++
Sbjct: 152 GGKCVYITTEGDLPTQRLESMLSS-RPAYEKLGITQSNIFTVSCNDLINQEHIINVQLPI 210
Query: 129 FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTM--DDLKKRSFLFFKISGMLKAMAVGFGL 186
++ S S I+L++IDSI+ R + N + + +++L +++ L+ +A + L
Sbjct: 211 LLERSKGS---IKLVIIDSISHHLRVELQNKSFRESQENKNYLD-RMAEKLQILAHDYSL 266
Query: 187 AVLVTNQVVD 196
+V+V NQV D
Sbjct: 267 SVVVANQVGD 276
Score = 68 (29.0 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 20/78 (25%), Positives = 39/78 (50%)
Query: 224 PALGIAWANCVNSRLFLSRN---EDFVVR-ENQMVNGGVGGSGSEDFVCRRTRRSLHVVF 279
P LG+ W+N V++R+ L ++ + R E + GG S F + +R++ VV+
Sbjct: 386 PNLGLTWSNHVSTRILLQKSFKASTIIQRGEAHLYKGG----DSASFW--QVKRTMKVVY 439
Query: 280 APHLADTSCEFEITREGV 297
+ ++IT+ G+
Sbjct: 440 STFAKPGQIAYQITKRGI 457
>ASPGD|ASPL0000057020 [details] [associations]
symbol:uvsC species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IMP] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0006312 "mitotic recombination" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0006311 "meiotic gene conversion"
evidence=IEA] [GO:0000711 "meiotic DNA repair synthesis"
evidence=IEA] [GO:0007533 "mating type switching" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0030998 "linear element" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0003691 "double-stranded telomeric DNA binding" evidence=IEA]
[GO:0000150 "recombinase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0043047 "single-stranded telomeric DNA
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 GO:GO:0003684 GO:GO:0006281 SUPFAM:SSF47794
GO:GO:0008094 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 ProteinModelPortal:C8VSQ3
SMR:C8VSQ3 EnsemblFungi:CADANIAT00001386 Uniprot:C8VSQ3
Length = 348
Score = 208 (78.3 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 57/175 (32%), Positives = 87/175 (49%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 104 TTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D L ++ + + + S
Sbjct: 164 EGTFRPVRLLAVAQRYGLVGEE-VLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS +L+R+DF N +L R K L+ +A FG+AV++TNQVV
Sbjct: 219 -LLVVDSATSLYRTDF-NGRGELSTRQTHLAKFMRTLQRLADEFGIAVVITNQVV 271
Score = 38 (18.4 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 269 RRTRRSLHVVFAPHLADTSCEFEITREGV 297
R R + +P L ++ C F I +G+
Sbjct: 309 RGETRVCKIYDSPCLPESDCLFAINEDGI 337
>UNIPROTKB|B6JXU7 [details] [associations]
symbol:SJAG_01410 "DNA repair protein RAD51" species:402676
"Schizosaccharomyces japonicus yFS275" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0003684 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 OrthoDB:EOG41CB4Z EMBL:DS022225
RefSeq:XP_002172658.1 ProteinModelPortal:B6JXU7 GeneID:7048158
Uniprot:B6JXU7
Length = 370
Score = 215 (80.7 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 57/175 (32%), Positives = 87/175 (49%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GG+ SITEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 129 TTGSKQLDTLLQGGVETGSITELFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLYIDT 188
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N D + ++ D L+++ + + + S S
Sbjct: 189 EGTFRPVRLLAVAERYG-LNGEEVLDNVAYARAYNADHQLELLQQAANMMAESRFS---- 243
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS AL+R+DF +L R + L+ +A FG+AV++TNQVV
Sbjct: 244 -LLVVDSCTALYRTDFSGR-GELSARQMHLARFMRTLQRLADEFGIAVVITNQVV 296
>DICTYBASE|DDB_G0273611 [details] [associations]
symbol:rad51-2 "putative DNA repair protein 51"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0051106 "positive regulation of DNA ligation" evidence=ISS]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0003697 "single-stranded
DNA binding" evidence=ISS] [GO:0003690 "double-stranded DNA
binding" evidence=ISS] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 dictyBase:DDB_G0273611
dictyBase:DDB_G0273139 GO:GO:0005524 GO:GO:0005634 GO:GO:0003684
EMBL:AAFI02000011 EMBL:AAFI02000009 GO:GO:0003690 GO:GO:0003697
GO:GO:0000724 SUPFAM:SSF47794 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0043142
GO:GO:0006268 KO:K04482 GO:GO:0051106 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 RefSeq:XP_644422.1
RefSeq:XP_644828.1 ProteinModelPortal:Q557E6 SMR:Q557E6
STRING:Q557E6 EnsemblProtists:DDB0232316 EnsemblProtists:DDB0304849
GeneID:8618930 GeneID:8619047 KEGG:ddi:DDB_G0273139
KEGG:ddi:DDB_G0273611 InParanoid:Q557E6 ProtClustDB:PTZ00035
Uniprot:Q557E6
Length = 351
Score = 212 (79.7 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 57/175 (32%), Positives = 90/175 (51%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G D L GGI SITE+ E +GKTQ C L ++ QL S GG +LY+ T
Sbjct: 113 TTGSKEFDSLLDGGIESGSITEIFGEFRTGKTQICHTLCVTCQLGYSQGGGEGRALYIDT 172
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + +H D + ++ D L+++ + + + S SR
Sbjct: 173 EGTFRPERLLAIAERYNLNGEH-VLDNVSYARAYNSDHQLELLVQASAMM---SESRYA- 227
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+D+ +L R + L+ +A FG+AV++TNQVV
Sbjct: 228 -LLIVDSATALYRTDYAGR-GELADRQKHLARFLRTLQRLADEFGVAVVITNQVV 280
>DICTYBASE|DDB_G0273139 [details] [associations]
symbol:rad51-1 "putative DNA repair protein 51"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0051106 "positive regulation of DNA ligation" evidence=ISS]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0003697 "single-stranded
DNA binding" evidence=ISS] [GO:0003690 "double-stranded DNA
binding" evidence=ISS] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 dictyBase:DDB_G0273611
dictyBase:DDB_G0273139 GO:GO:0005524 GO:GO:0005634 GO:GO:0003684
EMBL:AAFI02000011 EMBL:AAFI02000009 GO:GO:0003690 GO:GO:0003697
GO:GO:0000724 SUPFAM:SSF47794 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0043142
GO:GO:0006268 KO:K04482 GO:GO:0051106 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 RefSeq:XP_644422.1
RefSeq:XP_644828.1 ProteinModelPortal:Q557E6 SMR:Q557E6
STRING:Q557E6 EnsemblProtists:DDB0232316 EnsemblProtists:DDB0304849
GeneID:8618930 GeneID:8619047 KEGG:ddi:DDB_G0273139
KEGG:ddi:DDB_G0273611 InParanoid:Q557E6 ProtClustDB:PTZ00035
Uniprot:Q557E6
Length = 351
Score = 212 (79.7 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 57/175 (32%), Positives = 90/175 (51%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G D L GGI SITE+ E +GKTQ C L ++ QL S GG +LY+ T
Sbjct: 113 TTGSKEFDSLLDGGIESGSITEIFGEFRTGKTQICHTLCVTCQLGYSQGGGEGRALYIDT 172
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + +H D + ++ D L+++ + + + S SR
Sbjct: 173 EGTFRPERLLAIAERYNLNGEH-VLDNVSYARAYNSDHQLELLVQASAMM---SESRYA- 227
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+D+ +L R + L+ +A FG+AV++TNQVV
Sbjct: 228 -LLIVDSATALYRTDYAGR-GELADRQKHLARFLRTLQRLADEFGVAVVITNQVV 280
>CGD|CAL0001214 [details] [associations]
symbol:RAD51 species:5476 "Candida albicans" [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0030998 "linear
element" evidence=IEA] [GO:0003691 "double-stranded telomeric DNA
binding" evidence=IEA] [GO:0000150 "recombinase activity"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0006311 "meiotic gene conversion" evidence=IEA] [GO:0000722
"telomere maintenance via recombination" evidence=IEA] [GO:0051260
"protein homooligomerization" evidence=IEA] [GO:0042148 "strand
invasion" evidence=IEA] [GO:0000709 "meiotic joint molecule
formation" evidence=IEA] [GO:0030491 "heteroduplex formation"
evidence=IEA] [GO:0007533 "mating type switching" evidence=IEA]
[GO:0000711 "meiotic DNA repair synthesis" evidence=IEA]
[GO:0006200 "ATP catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 CGD:CAL0001214 GO:GO:0005524
GO:GO:0003684 GO:GO:0000724 SUPFAM:SSF47794 GO:GO:0044182
GO:GO:0008094 GO:GO:1900429 GO:GO:0036166 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 KO:K04482 EMBL:AACQ01000127
EMBL:AACQ01000126 PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239
RefSeq:XP_713440.1 RefSeq:XP_713476.1 ProteinModelPortal:Q59UY8
SMR:Q59UY8 STRING:Q59UY8 GeneID:3644908 GeneID:3644944
KEGG:cal:CaO19.11236 KEGG:cal:CaO19.3752 Uniprot:Q59UY8
Length = 361
Score = 212 (79.7 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 56/184 (30%), Positives = 93/184 (50%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGG+ SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 120 TTGSKQLDTLLGGGVETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLYIDT 179
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N ++ D + ++ + L+++ + S S
Sbjct: 180 EGTFRPNRLVSIAQRYG-LNPNDCLDNVAYARAYNAEHQLNLLNIAAEMMAESRFS---- 234
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+++DSI +L+R+D+ +L R K L+ +A FG+AV++TNQVV ++
Sbjct: 235 -LLIVDSIMSLYRTDYAGR-GELSARQTHVAKFMRTLQRLADEFGIAVVITNQVVAQVDG 292
Query: 201 NEGV 204
G+
Sbjct: 293 MSGM 296
>UNIPROTKB|Q59UY8 [details] [associations]
symbol:RAD51 "Putative uncharacterized protein RAD51"
species:237561 "Candida albicans SC5314" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 CGD:CAL0001214 GO:GO:0005524
GO:GO:0003684 GO:GO:0000724 SUPFAM:SSF47794 GO:GO:0044182
GO:GO:0008094 GO:GO:1900429 GO:GO:0036166 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 KO:K04482 EMBL:AACQ01000127
EMBL:AACQ01000126 PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239
RefSeq:XP_713440.1 RefSeq:XP_713476.1 ProteinModelPortal:Q59UY8
SMR:Q59UY8 STRING:Q59UY8 GeneID:3644908 GeneID:3644944
KEGG:cal:CaO19.11236 KEGG:cal:CaO19.3752 Uniprot:Q59UY8
Length = 361
Score = 212 (79.7 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 56/184 (30%), Positives = 93/184 (50%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGG+ SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 120 TTGSKQLDTLLGGGVETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLYIDT 179
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N ++ D + ++ + L+++ + S S
Sbjct: 180 EGTFRPNRLVSIAQRYG-LNPNDCLDNVAYARAYNAEHQLNLLNIAAEMMAESRFS---- 234
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+++DSI +L+R+D+ +L R K L+ +A FG+AV++TNQVV ++
Sbjct: 235 -LLIVDSIMSLYRTDYAGR-GELSARQTHVAKFMRTLQRLADEFGIAVVITNQVVAQVDG 292
Query: 201 NEGV 204
G+
Sbjct: 293 MSGM 296
>UNIPROTKB|A3E3X4 [details] [associations]
symbol:rad51 "Rad51" species:4754 "Pneumocystis carinii"
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0003684 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 SUPFAM:SSF47794 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:DQ865192 EMBL:DQ865193
ProteinModelPortal:A3E3X4 SMR:A3E3X4 Uniprot:A3E3X4
Length = 343
Score = 210 (79.0 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 56/181 (30%), Positives = 89/181 (49%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 105 TTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLYIDT 164
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N D + ++ D L ++ + + + S S
Sbjct: 165 EGTFRPTRLLAVADRYG-LNGEEVLDNVAYARAYNADHQLQLLGQAANMMAESRFS---- 219
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+++DS +L+R+DF +L R K L+ +A +G+AV++TNQVV ++
Sbjct: 220 -LLIVDSATSLYRTDFAGR-GELSARQMHLAKFLRTLQRLADEYGIAVVITNQVVAQVDG 277
Query: 201 N 201
N
Sbjct: 278 N 278
>UNIPROTKB|A3E3X6 [details] [associations]
symbol:rad51 "Rad51" species:263815 "Pneumocystis murina"
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0003684 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 SUPFAM:SSF47794 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:DQ865194 EMBL:DQ865195
ProteinModelPortal:A3E3X6 SMR:A3E3X6 Uniprot:A3E3X6
Length = 343
Score = 210 (79.0 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 56/181 (30%), Positives = 89/181 (49%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 105 TTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLYIDT 164
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N D + ++ D L ++ + + + S S
Sbjct: 165 EGTFRPTRLLAVADRYG-LNGEEVLDNVAYARAYNADHQLQLLGQAANMMAESRFS---- 219
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+++DS +L+R+DF +L R K L+ +A +G+AV++TNQVV ++
Sbjct: 220 -LLIVDSATSLYRTDFAGR-GELSARQMHLAKFLRTLQRLADEYGIAVVITNQVVAQVDG 277
Query: 201 N 201
N
Sbjct: 278 N 278
>UNIPROTKB|B0M1M6 [details] [associations]
symbol:pigRAD51 "Rad51" species:9823 "Sus scrofa"
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0051106
"positive regulation of DNA ligation" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0016605
"PML body" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0006268 "DNA
unwinding involved in replication" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0007126 GO:GO:0048471
GO:GO:0003684 GO:GO:0016605 GO:GO:0051260 GO:GO:0003690
GO:GO:0003697 GO:GO:0000724 SUPFAM:SSF47794 GO:GO:0000800
eggNOG:COG0468 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268 KO:K04482
GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:CU633257 EMBL:EU302125 EMBL:AB355632
RefSeq:NP_001116653.1 UniGene:Ssc.22664 SMR:B0M1M6 STRING:B0M1M6
Ensembl:ENSSSCT00000005265 GeneID:100141309 KEGG:ssc:100141309
Uniprot:B0M1M6
Length = 339
Score = 209 (78.6 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 55/175 (31%), Positives = 87/175 (49%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+ T
Sbjct: 103 TTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + S + D + + D ++ + + + S +
Sbjct: 163 EGTFRPERLLAVAERYGLSGS-DVLDNVAYARAFNTDHQTQLLYQASAMMVESRYA---- 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L++IDS AL+R+D+ +L R + ML +A FG+AV++TNQVV
Sbjct: 218 -LLIIDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVV 270
>UNIPROTKB|G1K2Z8 [details] [associations]
symbol:RAD51 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0000800 "lateral
element" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006268
"DNA unwinding involved in replication" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0051106 "positive regulation of DNA ligation" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0003684 GO:GO:0006281 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 EMBL:AADN02040043
ProteinModelPortal:G1K2Z8 Ensembl:ENSGALT00000007192 Uniprot:G1K2Z8
Length = 337
Score = 208 (78.3 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 55/175 (31%), Positives = 87/175 (49%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GGI SITEL E +GKTQ C L ++ QLP GG ++Y+ T
Sbjct: 101 TTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYIDT 160
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 EGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMAESRYA---- 215
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV
Sbjct: 216 -LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVV 268
>ZFIN|ZDB-GENE-041010-204 [details] [associations]
symbol:rad51c "rad51 homolog C (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 ZFIN:ZDB-GENE-041010-204 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5889 HOVERGEN:HBG055764 KO:K10870
OrthoDB:EOG4CRM09 EMBL:BC083214 IPI:IPI00498753
RefSeq:NP_001006101.1 UniGene:Dr.83418 ProteinModelPortal:Q5XJT2
STRING:Q5XJT2 GeneID:450081 KEGG:dre:450081 InParanoid:Q5XJT2
NextBio:20833059 ArrayExpress:Q5XJT2 Uniprot:Q5XJT2
Length = 362
Score = 209 (78.6 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 74/249 (29%), Positives = 115/249 (46%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T +LL T C +D +GGG+P TE+ G GKTQ C+QL + Q+
Sbjct: 71 VTALDLLHQEQTLGSIVTFCSGLDDAIGGGVPVGKTTEICGAPGVGKTQLCMQLAVDVQI 130
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSND---HNPCDYIFVQSVHSV 116
P GGL +LY+ TE F ++R+ ++ H + D + + V+ + S
Sbjct: 131 PVFFGGLGGKALYIDTEGSFLVQRVADMAEAAVQHCTLLAEDTEQKGALEELNVEKILSN 190
Query: 117 DQLL---DIMPKI-ESFIKNSSNSRLP-IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFF 171
L+ D + + E ++ S P +RL+VIDSIA FR DF+ DL +R+ L
Sbjct: 191 LFLVRCHDYVKLLAEVYLLPDFLSEHPEVRLVVIDSIAFPFRHDFE----DLSQRTRLLN 246
Query: 172 KISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWA 231
++ L +A +AV++TNQ+ RV N + PALG +W
Sbjct: 247 GLAQQLIQLATQHRVAVVLTNQMTT-----------RVSN------GQSKLVPALGESWG 289
Query: 232 NCVNSRLFL 240
+ RL L
Sbjct: 290 HAATQRLIL 298
>UNIPROTKB|P37383 [details] [associations]
symbol:RAD51A "DNA repair protein RAD51 homolog 1"
species:9031 "Gallus gallus" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000793
"condensed chromosome" evidence=ISS] [GO:0000794 "condensed nuclear
chromosome" evidence=ISS] [GO:0006268 "DNA unwinding involved in
replication" evidence=ISS] [GO:0000800 "lateral element"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0051106 "positive regulation of DNA ligation"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0005634
"nucleus" evidence=ISS] [GO:0007126 "meiosis" evidence=ISS]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006302 "double-strand break repair"
evidence=TAS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0007126
GO:GO:0048471 GO:GO:0005654 GO:GO:0003684 GO:GO:0016605
GO:GO:0051260 GO:GO:0003690 GO:GO:0003697 GO:GO:0000724
GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0000800 Reactome:REACT_115612
eggNOG:COG0468 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268 KO:K04482
GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888 EMBL:L09655
EMBL:S59426 IPI:IPI00593131 PIR:S35642 RefSeq:NP_990504.1
UniGene:Gga.2303 ProteinModelPortal:P37383 SMR:P37383 STRING:P37383
Ensembl:ENSGALT00000032744 GeneID:396086 KEGG:gga:396086
InParanoid:P37383 NextBio:20816144 Uniprot:P37383
Length = 339
Score = 208 (78.3 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 55/175 (31%), Positives = 87/175 (49%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GGI SITEL E +GKTQ C L ++ QLP GG ++Y+ T
Sbjct: 103 TTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYIDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + S + D + + D ++ + + + S +
Sbjct: 163 EGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMAESRYA---- 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV
Sbjct: 218 -LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVV 270
>UNIPROTKB|Q06609 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9606 "Homo sapiens" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=TAS] [GO:0000794 "condensed nuclear
chromosome" evidence=ISS] [GO:0007126 "meiosis" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IDA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IDA;TAS] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0006268 "DNA unwinding involved in replication" evidence=IDA]
[GO:0003697 "single-stranded DNA binding" evidence=IDA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0051106 "positive
regulation of DNA ligation" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0016605 "PML body" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006312 "mitotic recombination" evidence=TAS] [GO:0007131
"reciprocal meiotic recombination" evidence=TAS] [GO:0005524 "ATP
binding" evidence=IDA] [GO:0000730 "DNA recombinase assembly"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281
"DNA repair" evidence=TAS] [GO:0006302 "double-strand break repair"
evidence=TAS] [GO:0042802 "identical protein binding" evidence=IPI]
Reactome:REACT_216 InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0005759 GO:GO:0003684 GO:GO:0016605
GO:GO:0051260 Reactome:REACT_111183 GO:GO:0003690 GO:GO:0003697
GO:GO:0000794 MIM:114480 GO:GO:0006312
Pathway_Interaction_DB:bard1pathway GO:GO:0007131 Orphanet:145
SUPFAM:SSF47794 GO:GO:0000800 PDB:1N0W PDBsum:1N0W EMBL:AC022405
EMBL:CH471125 EMBL:AC012476 Orphanet:238722 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142
GO:GO:0006268 KO:K04482 GO:GO:0051106 GO:GO:0000730 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:D13804 EMBL:D14134 EMBL:AF165094
EMBL:AF165088 EMBL:AF165089 EMBL:AF165090 EMBL:AF165091
EMBL:AF165092 EMBL:AF165093 EMBL:AF233744 EMBL:AF233740
EMBL:AF233741 EMBL:AF233742 EMBL:AF236021 EMBL:AF233743
EMBL:EU362635 EMBL:AY196785 EMBL:AK131299 EMBL:AK291969
EMBL:AK313503 EMBL:CR536559 EMBL:BC001459 IPI:IPI00032201
IPI:IPI00220649 IPI:IPI00553199 IPI:IPI01010370 PIR:I58295
RefSeq:NP_001157741.1 RefSeq:NP_001157742.1 RefSeq:NP_002866.2
RefSeq:NP_597994.3 UniGene:Hs.631709 PDB:1B22 PDBsum:1B22
ProteinModelPortal:Q06609 SMR:Q06609 DIP:DIP-462N IntAct:Q06609
MINT:MINT-1374477 STRING:Q06609 PhosphoSite:Q06609 DMDM:548663
PaxDb:Q06609 PRIDE:Q06609 DNASU:5888 Ensembl:ENST00000267868
Ensembl:ENST00000382643 Ensembl:ENST00000423169
Ensembl:ENST00000532743 Ensembl:ENST00000557850 GeneID:5888
KEGG:hsa:5888 UCSC:uc001zmi.4 UCSC:uc010bbw.3 GeneCards:GC15P040987
HGNC:HGNC:9817 HPA:CAB010381 MIM:179617 MIM:614508
neXtProt:NX_Q06609 PharmGKB:PA34176 PhylomeDB:Q06609
BindingDB:Q06609 ChiTaRS:RAD51 EvolutionaryTrace:Q06609
GenomeRNAi:5888 NextBio:22896 PMAP-CutDB:Q06609 ArrayExpress:Q06609
Bgee:Q06609 CleanEx:HS_RAD51 Genevestigator:Q06609
GermOnline:ENSG00000051180 Uniprot:Q06609
Length = 339
Score = 208 (78.3 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+ T
Sbjct: 103 TTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + S + D + + D ++ + + + S +
Sbjct: 163 EGTFRPERLLAVAERYGLSGS-DVLDNVAYARAFNTDHQTQLLYQASAMMVESRYA---- 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV
Sbjct: 218 -LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVV 270
>UNIPROTKB|F1S262 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR004504 InterPro:IPR020588 PRINTS:PR01874
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003684
GO:GO:0006281 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
OMA:QRDLVSF EMBL:FP102481 Ensembl:ENSSSCT00000019210 Uniprot:F1S262
Length = 321
Score = 198 (74.8 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 57/219 (26%), Positives = 99/219 (45%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGG+P ITE+ G GKTQ C+QL +
Sbjct: 73 GKKYTALELLEQEHTQSFIITFCSALDNILGGGVPLTKITEICGAPGVGKTQLCMQLAVD 132
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRR-----------LHQLSHTFRPSNDHNPCDYIFV 110
Q+P GG+ ++++ TE F + R LH ++ T +
Sbjct: 133 VQIPECFGGVEGEAVFIDTEGSFMVNRVVDLATACIQHLHLIAGTHMEEEQPKALQDFTL 192
Query: 111 QSVHS---VDQLLDIMPKIES--FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKK 165
+++ S + D + + + + +RL+++D IA FR + +DDL
Sbjct: 193 ENILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHE----LDDLSL 248
Query: 166 RSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGV 204
R+ L ++ + ++A LAV++TNQ+ ++ NE +
Sbjct: 249 RTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNEAL 287
Score = 39 (18.8 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 222 ICPALGIAWANCVNSRL 238
+ PALG +W + RL
Sbjct: 288 LVPALGESWGHAATIRL 304
>UNIPROTKB|G5EGG8 [details] [associations]
symbol:rad-51 "RecA/Rad51/Dmc1-like protein" species:6239
"Caenorhabditis elegans" [GO:0006310 "DNA recombination"
evidence=IDA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0035188
GO:GO:0043066 GO:GO:0042771 GO:GO:0003684 GO:GO:0006281
GO:GO:0003690 GO:GO:0000794 GO:GO:0045132 SUPFAM:SSF47794
GO:GO:0008094 GO:GO:0010032 GO:GO:0043073 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150
KO:K04482 GeneTree:ENSGT00550000074609 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838 EMBL:AF061201
EMBL:AB011382 PIR:T37305 RefSeq:NP_001023466.1 UniGene:Cel.19596
ProteinModelPortal:G5EGG8 SMR:G5EGG8 IntAct:G5EGG8
EnsemblMetazoa:Y43C5A.6b GeneID:177914 KEGG:cel:CELE_Y43C5A.6
CTD:177914 WormBase:Y43C5A.6b NextBio:898916 Uniprot:G5EGG8
Length = 357
Score = 201 (75.8 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 55/176 (31%), Positives = 90/176 (51%)
Query: 23 GCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEF 82
G +DR LGGGI SITE+ E +GKTQ C L + QLP GG +Y+ T
Sbjct: 121 GSASLDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTNA 180
Query: 83 PFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRL 142
F R+ ++ + + H + I V ++ + L+ ++ + + + S SR +
Sbjct: 181 TFRPERIIAIAQRYNMDSAH-VLENIAVARAYNSEHLMALIIRAGAMM---SESRYAV-- 234
Query: 143 IVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAV---GFGLAVLVTNQVV 195
+++D A FR+++ DL +R K+S LK +A +G+AV++TNQVV
Sbjct: 235 VIVDCATAHFRNEYTGR-GDLAERQM---KLSAFLKCLAKLADEYGVAVIITNQVV 286
Score = 37 (18.1 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 273 RSLHVVFAPHLADTSCEFEITREGV 297
R +V +P+L + + IT G+
Sbjct: 327 RVAKMVQSPNLPEAEATYSITNHGI 351
>UNIPROTKB|Q2KJ94 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISS] [GO:0005759 "mitochondrial
matrix" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0051106 "positive regulation of DNA ligation"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0006268 "DNA unwinding involved in replication"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 GO:GO:0048471
GO:GO:0005759 GO:GO:0003684 GO:GO:0016605 GO:GO:0051260
GO:GO:0003690 GO:GO:0003697 GO:GO:0000724 SUPFAM:SSF47794
GO:GO:0000800 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268
KO:K04482 GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 EMBL:BC105458
IPI:IPI00686332 RefSeq:NP_001039644.1 UniGene:Bt.36197 HSSP:O73948
ProteinModelPortal:Q2KJ94 SMR:Q2KJ94 STRING:Q2KJ94 PRIDE:Q2KJ94
Ensembl:ENSBTAT00000003788 GeneID:514749 KEGG:bta:514749 CTD:5888
InParanoid:Q2KJ94 OrthoDB:EOG47H5QB NextBio:20871491 Uniprot:Q2KJ94
Length = 339
Score = 205 (77.2 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+ T
Sbjct: 103 TTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + S + D + + D ++ + + + S +
Sbjct: 163 EGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYA---- 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV
Sbjct: 218 -LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVV 270
>UNIPROTKB|Q8MKI8 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9615 "Canis lupus familiaris" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0006268 "DNA
unwinding involved in replication" evidence=ISS] [GO:0007126
"meiosis" evidence=ISS] [GO:0000794 "condensed nuclear chromosome"
evidence=ISS] [GO:0000793 "condensed chromosome" evidence=ISS]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0051260
"protein homooligomerization" evidence=IEA] [GO:0051106 "positive
regulation of DNA ligation" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0016605
"PML body" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0007126 GO:GO:0048471 GO:GO:0005759
GO:GO:0003684 GO:GO:0016605 GO:GO:0051260 GO:GO:0003690
GO:GO:0003697 GO:GO:0000724 GO:GO:0000794 SUPFAM:SSF47794
GO:GO:0000800 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268
KO:K04482 GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:AB043896 RefSeq:NP_001003043.1
UniGene:Cfa.85 ProteinModelPortal:Q8MKI8 SMR:Q8MKI8 STRING:Q8MKI8
Ensembl:ENSCAFT00000014658 GeneID:403568 KEGG:cfa:403568
InParanoid:Q8MKI8 NextBio:20817076 Uniprot:Q8MKI8
Length = 339
Score = 205 (77.2 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+ T
Sbjct: 103 TTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + S + D + + D ++ + + + S +
Sbjct: 163 EGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYA---- 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV
Sbjct: 218 -LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVV 270
>UNIPROTKB|P70099 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:10029 "Cricetulus griseus" [GO:0000793 "condensed
chromosome" evidence=ISS] [GO:0000794 "condensed nuclear
chromosome" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006268 "DNA unwinding
involved in replication" evidence=ISS] [GO:0007126 "meiosis"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0007126 GO:GO:0048471
GO:GO:0005759 GO:GO:0003684 GO:GO:0006281 GO:GO:0006310
GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
HOVERGEN:HBG001504 GO:GO:0006268 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 CTD:5888 EMBL:Y08202 RefSeq:NP_001233686.1
ProteinModelPortal:P70099 SMR:P70099 GeneID:100689324
Uniprot:P70099
Length = 339
Score = 205 (77.2 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+ T
Sbjct: 103 TTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + S + D + + D ++ + + + S +
Sbjct: 163 EGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYA---- 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV
Sbjct: 218 -LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVV 270
>MGI|MGI:97890 [details] [associations]
symbol:Rad51 "RAD51 homolog" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=ISO;IDA;IMP] [GO:0000793 "condensed chromosome"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0000795 "synaptonemal complex" evidence=TAS]
[GO:0000800 "lateral element" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0006268 "DNA unwinding involved in replication"
evidence=ISO] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=TAS] [GO:0007126 "meiosis" evidence=IDA]
[GO:0007131 "reciprocal meiotic recombination" evidence=TAS]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016605 "PML
body" evidence=ISO] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] [GO:0051106 "positive regulation of DNA
ligation" evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 MGI:MGI:97890 GO:GO:0005524 GO:GO:0048471
GO:GO:0005654 GO:GO:0005759 GO:GO:0003684 GO:GO:0016605
GO:GO:0051260 Reactome:REACT_120463 GO:GO:0003690 GO:GO:0003697
GO:GO:0000724 GO:GO:0007131 Reactome:REACT_27235 SUPFAM:SSF47794
GO:GO:0000800 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268
KO:K04482 GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:D13473 EMBL:D13803 EMBL:AK011242
EMBL:AK076468 EMBL:AK151157 EMBL:AK151177 EMBL:BC027384
IPI:IPI00118524 PIR:A48221 RefSeq:NP_035364.1 UniGene:Mm.330492
ProteinModelPortal:Q08297 SMR:Q08297 IntAct:Q08297 MINT:MINT-205669
STRING:Q08297 PhosphoSite:Q08297 PaxDb:Q08297 PRIDE:Q08297
Ensembl:ENSMUST00000028795 GeneID:19361 KEGG:mmu:19361
InParanoid:Q08297 NextBio:296421 Bgee:Q08297 CleanEx:MM_RAD51
Genevestigator:Q08297 GermOnline:ENSMUSG00000027323 Uniprot:Q08297
Length = 339
Score = 205 (77.2 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+ T
Sbjct: 103 TTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + S + D + + D ++ + + + S +
Sbjct: 163 EGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYA---- 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV
Sbjct: 218 -LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVV 270
>WB|WBGene00004297 [details] [associations]
symbol:rad-51 species:6239 "Caenorhabditis elegans"
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0009432 "SOS
response" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0033554 "cellular
response to stress" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0035188 "hatching" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0042771 "intrinsic apoptotic
signaling pathway in response to DNA damage by p53 class mediator"
evidence=IGI] [GO:0010032 "meiotic chromosome condensation"
evidence=IMP] [GO:0043073 "germ cell nucleus" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0000150 "recombinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0017151 "DEAD/H-box RNA
helicase binding" evidence=IPI] [GO:0003690 "double-stranded DNA
binding" evidence=IDA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0035188
GO:GO:0043066 GO:GO:0042771 GO:GO:0003684 GO:GO:0006281
GO:GO:0003690 GO:GO:0000794 GO:GO:0045132 SUPFAM:SSF47794
GO:GO:0008094 GO:GO:0010032 GO:GO:0043073 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 KO:K04482
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838 UniGene:Cel.19596
GeneID:177914 KEGG:cel:CELE_Y43C5A.6 CTD:177914 NextBio:898916
RefSeq:NP_001023465.1 ProteinModelPortal:Q95Q25 SMR:Q95Q25
DIP:DIP-25225N IntAct:Q95Q25 MINT:MINT-226974 STRING:Q95Q25
EnsemblMetazoa:Y43C5A.6a UCSC:Y43C5A.6b WormBase:Y43C5A.6a
InParanoid:Q95Q25 ArrayExpress:Q95Q25 Uniprot:Q95Q25
Length = 395
Score = 201 (75.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 55/176 (31%), Positives = 90/176 (51%)
Query: 23 GCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEF 82
G +DR LGGGI SITE+ E +GKTQ C L + QLP GG +Y+ T
Sbjct: 159 GSASLDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTNA 218
Query: 83 PFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRL 142
F R+ ++ + + H + I V ++ + L+ ++ + + + S SR +
Sbjct: 219 TFRPERIIAIAQRYNMDSAH-VLENIAVARAYNSEHLMALIIRAGAMM---SESRYAV-- 272
Query: 143 IVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAV---GFGLAVLVTNQVV 195
+++D A FR+++ DL +R K+S LK +A +G+AV++TNQVV
Sbjct: 273 VIVDCATAHFRNEYTGR-GDLAERQM---KLSAFLKCLAKLADEYGVAVIITNQVV 324
Score = 37 (18.1 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 273 RSLHVVFAPHLADTSCEFEITREGV 297
R +V +P+L + + IT G+
Sbjct: 365 RVAKMVQSPNLPEAEATYSITNHGI 389
>UNIPROTKB|Q95Q25 [details] [associations]
symbol:rad-51 "Protein RAD-51, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006310 "DNA recombination"
evidence=IDA] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0035188 GO:GO:0043066 GO:GO:0042771
GO:GO:0003684 GO:GO:0006281 GO:GO:0003690 GO:GO:0000794
GO:GO:0045132 SUPFAM:SSF47794 GO:GO:0008094 GO:GO:0010032
GO:GO:0043073 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150
KO:K04482 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838
UniGene:Cel.19596 GeneID:177914 KEGG:cel:CELE_Y43C5A.6 CTD:177914
NextBio:898916 RefSeq:NP_001023465.1 ProteinModelPortal:Q95Q25
SMR:Q95Q25 DIP:DIP-25225N IntAct:Q95Q25 MINT:MINT-226974
STRING:Q95Q25 EnsemblMetazoa:Y43C5A.6a UCSC:Y43C5A.6b
WormBase:Y43C5A.6a InParanoid:Q95Q25 ArrayExpress:Q95Q25
Uniprot:Q95Q25
Length = 395
Score = 201 (75.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 55/176 (31%), Positives = 90/176 (51%)
Query: 23 GCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEF 82
G +DR LGGGI SITE+ E +GKTQ C L + QLP GG +Y+ T
Sbjct: 159 GSASLDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTNA 218
Query: 83 PFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRL 142
F R+ ++ + + H + I V ++ + L+ ++ + + + S SR +
Sbjct: 219 TFRPERIIAIAQRYNMDSAH-VLENIAVARAYNSEHLMALIIRAGAMM---SESRYAV-- 272
Query: 143 IVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAV---GFGLAVLVTNQVV 195
+++D A FR+++ DL +R K+S LK +A +G+AV++TNQVV
Sbjct: 273 VIVDCATAHFRNEYTGR-GDLAERQM---KLSAFLKCLAKLADEYGVAVIITNQVV 324
Score = 37 (18.1 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 273 RSLHVVFAPHLADTSCEFEITREGV 297
R +V +P+L + + IT G+
Sbjct: 365 RVAKMVQSPNLPEAEATYSITNHGI 389
>UNIPROTKB|O77507 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9986 "Oryctolagus cuniculus" [GO:0003690 "double-stranded
DNA binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006268 "DNA unwinding
involved in replication" evidence=ISS] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0005759 GO:GO:0003684
GO:GO:0006281 GO:GO:0006310 GO:GO:0003690 SUPFAM:SSF47794
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0006268
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:AF017729 RefSeq:NP_001075493.1
UniGene:Ocu.2212 ProteinModelPortal:O77507 SMR:O77507 STRING:O77507
GeneID:100008661 Uniprot:O77507
Length = 339
Score = 201 (75.8 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 53/175 (30%), Positives = 86/175 (49%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+ T
Sbjct: 103 TTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + S + D + + D ++ + + + S +
Sbjct: 163 EGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYA---- 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+D+ +L R + ML +A FG+ V++TNQVV
Sbjct: 218 -LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVTVVITNQVV 270
>UNIPROTKB|F1N1D2 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007286 "spermatid development" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0007286 GO:GO:0003677 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0007141 GO:GO:0000239 GO:GO:0008094 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GeneTree:ENSGT00550000075091
EMBL:DAAA02014664 IPI:IPI00691200 Ensembl:ENSBTAT00000007794
Uniprot:F1N1D2
Length = 339
Score = 199 (75.1 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 54/175 (30%), Positives = 89/175 (50%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + GG S +++ T
Sbjct: 102 TTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGA-GGYSGGIIFIDT 160
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
E F RL ++ F DHN D + ++ + ++++ + + +
Sbjct: 161 ENTFRPDRLRDIADRFNV--DHNAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGI--- 215
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 216 FKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQM 269
>UNIPROTKB|Q9P972 [details] [associations]
symbol:LIM15/DMC1 homolog "LIM15/DMC1 homolog protein"
species:5346 "Coprinopsis cinerea" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
HSSP:Q06609 EMBL:AB036801 ProteinModelPortal:Q9P972 Uniprot:Q9P972
Length = 345
Score = 199 (75.1 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 53/174 (30%), Positives = 88/174 (50%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
+ G ++D LGGG+ SITE+ E +GKTQ +++ AQLP +GG + Y+ T
Sbjct: 109 STGSKLVDGILGGGVMSQSITEVYGEYRTGKTQLAHTMSVVAQLPPEYGGAAGKVAYIDT 168
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R+ ++ F + ++ ++ +S Q+ I F ++
Sbjct: 169 EGTFRPDRIRAIADRFGVDGTMALENILYARAFNSEHQMELINECSARFAEDKD-----F 223
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
RL++IDSI ALFR D+ +L +R ++ L ++ F +AVL+TNQV
Sbjct: 224 RLLIIDSIMALFRVDYSGR-GELSERQQKLAQMLSKLTKLSEEFNIAVLMTNQV 276
>ZFIN|ZDB-GENE-060331-93 [details] [associations]
symbol:dmc1 "DMC1 dosage suppressor of mck1 homolog,
meiosis-specific homologous recombination (yeast)" species:7955
"Danio rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
ZFIN:ZDB-GENE-060331-93 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144 HOVERGEN:HBG001504
EMBL:AB182999 IPI:IPI00832294 RefSeq:NP_001018618.1
UniGene:Dr.92382 ProteinModelPortal:Q50LF4 SMR:Q50LF4 STRING:Q50LF4
GeneID:553953 KEGG:dre:553953 InParanoid:Q50LF4 NextBio:20880545
Uniprot:Q50LF4
Length = 342
Score = 189 (71.6 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 52/185 (28%), Positives = 89/185 (48%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G D+ LGGG+ +ITE E +GKTQ L ++AQLP +G +++ T
Sbjct: 104 TTGSLEFDKLLGGGVESMAITEAFGEFRTGKTQLSHTLCVTAQLPGEYGYTGGKVIFIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
E F RL ++ F DH D + ++ + ++++ + +
Sbjct: 164 ENTFRPERLKDIADRFNV--DHEAVLDNVLYARAYTSEHQMELLDFVAAKFHEEGGV--- 218
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+ +
Sbjct: 219 FKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT--AD 275
Query: 200 PNEGV 204
P G+
Sbjct: 276 PGAGM 280
Score = 43 (20.2 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 269 RRTRRSLHV--VF-APHLADTSCEFEITREGV 297
R+ R L + +F +PH+ + F IT G+
Sbjct: 306 RKGRAELRIAKIFDSPHMPENEATFAITAGGI 337
>UNIPROTKB|F1PMI7 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0008821 "crossover junction endodeoxyribonuclease
activity" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0003677 GO:GO:0006281 GO:GO:0007283 GO:GO:0007131
GO:GO:0007141 GO:GO:0008821 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066
GeneTree:ENSGT00550000074609 OMA:QRDLVSF EMBL:AAEX03006577
EMBL:AAEX03006578 EMBL:AAEX03006579 Ensembl:ENSCAFT00000027833
Uniprot:F1PMI7
Length = 368
Score = 193 (73.0 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 58/219 (26%), Positives = 100/219 (45%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGGIP TE+ G GKTQ C+QL +
Sbjct: 75 GKKCTALELLEQEHTQSFIITFCSALDNILGGGIPLTKTTEICGVPGVGKTQLCMQLAVD 134
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDHNPCDYIFVQSVHSV 116
Q+P GG+ ++++ TE F + R+ L+ H + H ++ ++
Sbjct: 135 VQIPECFGGVEGEAVFIDTEGSFMVDRVVDLATACIQHLHLIAGRHMGEEHSKALEDFTL 194
Query: 117 DQLL---------DIMPKIES--FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKK 165
+ +L D + + + + +RL+++D IA FR D +DDL
Sbjct: 195 ENILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHD----LDDLSL 250
Query: 166 RSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGV 204
R+ L ++ + ++A LAVL+TNQ+ ++ N+ +
Sbjct: 251 RTRLLNGLAQQMISLANNHRLAVLLTNQMTTKIDRNQAL 289
Score = 39 (18.8 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 222 ICPALGIAWANCVNSRL 238
+ PALG +W + RL
Sbjct: 290 LVPALGESWGHAATIRL 306
>UNIPROTKB|Q8R2J9 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:10029 "Cricetulus griseus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0007062 "sister chromatid cohesion" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISS]
InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0003677 GO:GO:0006281
GO:GO:0006310 GO:GO:0008094 GO:GO:0007062 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 EMBL:AJ413202
EMBL:AJ428572 RefSeq:NP_001231005.1 HSSP:O74036
ProteinModelPortal:Q8R2J9 GeneID:100689078 CTD:5889
HOVERGEN:HBG055764 Uniprot:Q8R2J9
Length = 366
Score = 192 (72.6 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 57/219 (26%), Positives = 102/219 (46%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGGIP TE+ G GKTQ C+QL +
Sbjct: 73 GKKYTALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVD 132
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRR-----------LHQLSHTFRPSNDHNPCDYIFV 110
Q+P GG++ ++++ TE F + R LH ++ T + + +
Sbjct: 133 VQIPECFGGVAGEAVFIDTEGSFMVDRVVTLANACIQHLHLIAGTHKDEEHQKALEGFTL 192
Query: 111 QSVHS---VDQLLDIMPKIES--FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKK 165
+++ S + D + + + ++ ++L++ID IA FR D +DDL
Sbjct: 193 ENILSHIYYFRCHDYTELLAQVYLLPDFLSNHSKVQLVIIDGIALPFRHD----LDDLSL 248
Query: 166 RSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGV 204
R+ L ++ + ++A LAV++TNQ+ ++ N+ +
Sbjct: 249 RTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQAL 287
Score = 39 (18.8 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 222 ICPALGIAWANCVNSRL 238
+ PALG +W + RL
Sbjct: 288 LVPALGESWGHAATIRL 304
>UNIPROTKB|F1MW99 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0003677 GO:GO:0006281 GO:GO:0007283 GO:GO:0007131
GO:GO:0007141 GO:GO:0008821 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066
GeneTree:ENSGT00550000074609 OMA:QRDLVSF EMBL:DAAA02048323
IPI:IPI00713775 Ensembl:ENSBTAT00000020012 Uniprot:F1MW99
Length = 382
Score = 192 (72.6 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 57/219 (26%), Positives = 99/219 (45%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGGIP TE+ G GKTQ C+QL +
Sbjct: 83 GRKCTALELLEQEHTQNFIITFCSALDNILGGGIPLTKTTEICGAPGVGKTQLCMQLAID 142
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDHNPCDYIFVQSVHSV 116
Q+P GG+ ++++ TE F + R+ L+ H + H ++ ++
Sbjct: 143 VQIPECFGGVEGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAGTHMEEEHPKALQDFTL 202
Query: 117 DQLL---------DIMPKIES--FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKK 165
+ +L D + + + + +RL+++D IA FR D +DDL
Sbjct: 203 ENILSHIYYFRCRDYTELLAQVYLLSDFLSEHSKVRLVIVDGIAFPFRHD----LDDLSL 258
Query: 166 RSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGV 204
R+ L ++ + ++A LAV++TNQ+ + N+ +
Sbjct: 259 RTRLLNGLAQQMISLANNHRLAVILTNQMTTKFDRNQAL 297
Score = 39 (18.8 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 222 ICPALGIAWANCVNSRL 238
+ PALG +W + RL
Sbjct: 298 LVPALGESWGHAATIRL 314
>ZFIN|ZDB-GENE-040426-2286 [details] [associations]
symbol:rad51 "RAD51 homolog (RecA homolog, E.
coli) (S. cerevisiae)" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0051597 "response to methylmercury" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382
ZFIN:ZDB-GENE-040426-2286 GO:GO:0005524 GO:GO:0046686 GO:GO:0003684
GO:GO:0006281 GO:GO:0051597 SUPFAM:SSF47794 GO:GO:0008094
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 HOVERGEN:HBG001504 KO:K04482
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 CTD:5888 EMBL:BX936455 IPI:IPI00496483
RefSeq:NP_998371.2 UniGene:Dr.1514 SMR:Q5TYR1
Ensembl:ENSDART00000060706 GeneID:406487 KEGG:dre:406487
InParanoid:Q5TYR1 NextBio:20818074 Uniprot:Q5TYR1
Length = 340
Score = 195 (73.7 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 52/175 (29%), Positives = 86/175 (49%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
+ G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+ T
Sbjct: 104 STGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKAMYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + + D ++ + + + S +
Sbjct: 164 EGTFRPERLLAVAERYGLVGS-DVLDNVAYARAFNTDHQTQLLYQASAMMTESRYA---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV
Sbjct: 219 -LLIVDSATALYRTDYSGR-GELSARQGHLGRFLRMLLRLADEFGVAVVITNQVV 271
>UNIPROTKB|Q9DGC3 [details] [associations]
symbol:Dmc1 "DMC1" species:8330 "Cynops pyrrhogaster"
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238
HOVERGEN:HBG001504 GO:GO:0000150 HSSP:Q06609 EMBL:AB041944
ProteinModelPortal:Q9DGC3 SMR:Q9DGC3 Uniprot:Q9DGC3
Length = 342
Score = 193 (73.0 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 53/175 (30%), Positives = 88/175 (50%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++ T
Sbjct: 104 TTGSQEFDKLLGGGIESMAITETFGEFRTGKTQLSHTLCVTAQLPGTDGYTGGKVIFIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
E F RL ++ F S DH+ D + ++ + ++++ + + +
Sbjct: 164 ENTFRPDRLRDIADRF--SVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGI--- 218
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+L+VIDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 219 FKLLVIDSIMALFRVDFSGR-GELAERQQKLAQMLARLQKISEEYNVAVFVTNQM 272
>UNIPROTKB|J3QKK3 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 EMBL:AC025521 EMBL:AC011195
HGNC:HGNC:9820 ProteinModelPortal:J3QKK3 Ensembl:ENST00000583539
Uniprot:J3QKK3
Length = 346
Score = 187 (70.9 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 56/215 (26%), Positives = 100/215 (46%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T LL+ T C +D LGGG+P TE+ G GKTQ C+QL + Q+P
Sbjct: 86 TALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIP 145
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDHNPCDYIFVQSVHSVDQLL 120
GG++ ++++ TE F + R+ L+ H + H ++ ++D +L
Sbjct: 146 ECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTLDNIL 205
Query: 121 ---------DIMPKIES--FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFL 169
D + + + + +RL+++D IA FR D +DDL R+ L
Sbjct: 206 SHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHD----LDDLSLRTRL 261
Query: 170 FFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGV 204
++ + ++A LAV++TNQ+ ++ N+ +
Sbjct: 262 LNGLAQQMISLANNHRLAVILTNQMTTKIDRNQAL 296
Score = 39 (18.8 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 222 ICPALGIAWANCVNSRL 238
+ PALG +W + RL
Sbjct: 297 LVPALGESWGHAATIRL 313
>POMBASE|SPAC8E11.03c [details] [associations]
symbol:dmc1 "RecA family ATPase Dmc1" species:4896
"Schizosaccharomyces pombe" [GO:0000150 "recombinase activity"
evidence=IDA] [GO:0000709 "meiotic joint molecule formation"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=ISM;IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006311 "meiotic gene conversion" evidence=IMP]
[GO:0007131 "reciprocal meiotic recombination" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IPI] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 PomBase:SPAC8E11.03c
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0006281 GO:GO:0051260 GO:GO:0003690 GO:GO:0003697
GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468
HOGENOM:HOG000227426 KO:K10872 OMA:FFQDIDL InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 EMBL:AB008545 EMBL:D64035
PIR:T39157 PIR:T51302 RefSeq:NP_594166.1 ProteinModelPortal:O42634
DIP:DIP-29236N IntAct:O42634 STRING:O42634
EnsemblFungi:SPAC8E11.03c.1 GeneID:2542106 KEGG:spo:SPAC8E11.03c
OrthoDB:EOG43XZC8 NextBio:20803178 GO:GO:0006311 GO:GO:0000709
Uniprot:O42634
Length = 332
Score = 191 (72.3 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 55/189 (29%), Positives = 86/189 (45%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T + N + G ++ LGGGI SITE+ E GKTQ L ++AQLP
Sbjct: 81 TAMEISQNRKKVWSISTGSEALNGILGGGIQSMSITEVFGEFRCGKTQMSHTLCVTAQLP 140
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GG ++ TE F R+ ++ F D + I V ++ +Q ++ + K
Sbjct: 141 RDMGGAEGKVAFIDTEGTFRPDRIKAIAERFGVDADQ-AMENIIVSRAYNSEQQMEYITK 199
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ + RL+++DSI ALFR D+ +L +R + L ++ F
Sbjct: 200 LGTIFAEDGQ----YRLLIVDSIMALFRVDYSGR-GELSERQQKLNIMLARLNHISEEFN 254
Query: 186 LAVLVTNQV 194
+AV VTNQV
Sbjct: 255 VAVFVTNQV 263
>UNIPROTKB|G3V3Q2 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9606 "Homo
sapiens" [GO:0010033 "response to organic substance" evidence=IEA]
EMBL:AL049840 InterPro:IPR013632 Pfam:PF08423 HGNC:HGNC:12830
ProteinModelPortal:G3V3Q2 SMR:G3V3Q2 Ensembl:ENST00000554974
ArrayExpress:G3V3Q2 Bgee:G3V3Q2 Uniprot:G3V3Q2
Length = 141
Score = 124 (48.7 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 38/102 (37%), Positives = 51/102 (50%)
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
RL+VIDS+AA FR +FD+ + R + L+ ++ F VL NQV + ME
Sbjct: 3 RLVVIDSVAAPFRCEFDSQASAPRARHLQ--SLGATLRELSSAFQSPVLCINQVTEAMEE 60
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
G G LG + R + PALGI WAN + RL R
Sbjct: 61 Q----GAAHGPLG--FWDER-VSPALGITWANQLLVRLLADR 95
Score = 72 (30.4 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 273 RSLHVVFAPHLADTSCEFEITREGVFG 299
R+L V+ APHL +SC + I+ EGV G
Sbjct: 108 RTLRVLSAPHLPPSSCSYTISAEGVRG 134
>UNIPROTKB|O43502 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IDA] [GO:0006310
"DNA recombination" evidence=IDA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007062 "sister chromatid
cohesion" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007596 "blood
coagulation" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] Reactome:REACT_604 InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005739
GO:GO:0005524 GO:GO:0048471 GO:GO:0005654 GO:GO:0003677
GO:GO:0007596 GO:GO:0006281 GO:GO:0007283 GO:GO:0006310
EMBL:CH471109 GO:GO:0007131 Orphanet:145 Orphanet:84 GO:GO:0007141
GO:GO:0008821 GO:GO:0008094 GO:GO:0007062 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066 EMBL:AC025521 CTD:5889
HOVERGEN:HBG055764 KO:K10870 EMBL:AF029669 EMBL:AF029670
EMBL:AY623112 EMBL:AC011195 EMBL:BC107753 IPI:IPI00012829
IPI:IPI00040453 RefSeq:NP_002867.1 RefSeq:NP_478123.1
UniGene:Hs.412587 ProteinModelPortal:O43502 SMR:O43502
IntAct:O43502 MINT:MINT-204767 STRING:O43502 PhosphoSite:O43502
PRIDE:O43502 DNASU:5889 Ensembl:ENST00000337432
Ensembl:ENST00000421782 GeneID:5889 KEGG:hsa:5889 UCSC:uc002iwu.3
GeneCards:GC17P056769 HGNC:HGNC:9820 MIM:602774 MIM:613390
MIM:613399 neXtProt:NX_O43502 PharmGKB:PA34177 InParanoid:O43502
OMA:QRDLVSF OrthoDB:EOG4CRM09 PhylomeDB:O43502 GenomeRNAi:5889
NextBio:22902 ArrayExpress:O43502 Bgee:O43502 CleanEx:HS_RAD51C
Genevestigator:O43502 GermOnline:ENSG00000108384 Uniprot:O43502
Length = 376
Score = 187 (70.9 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 56/215 (26%), Positives = 100/215 (46%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T LL+ T C +D LGGG+P TE+ G GKTQ C+QL + Q+P
Sbjct: 86 TALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIP 145
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDHNPCDYIFVQSVHSVDQLL 120
GG++ ++++ TE F + R+ L+ H + H ++ ++D +L
Sbjct: 146 ECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTLDNIL 205
Query: 121 ---------DIMPKIES--FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFL 169
D + + + + +RL+++D IA FR D +DDL R+ L
Sbjct: 206 SHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHD----LDDLSLRTRL 261
Query: 170 FFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGV 204
++ + ++A LAV++TNQ+ ++ N+ +
Sbjct: 262 LNGLAQQMISLANNHRLAVILTNQMTTKIDRNQAL 296
Score = 39 (18.8 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 222 ICPALGIAWANCVNSRL 238
+ PALG +W + RL
Sbjct: 297 LVPALGESWGHAATIRL 313
>UNIPROTKB|E2RK50 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007286 "spermatid development" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0007286 GO:GO:0003677 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0007141 GO:GO:0000239 GO:GO:0008094 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144
GeneTree:ENSGT00550000075091 EMBL:AAEX03007314 RefSeq:XP_849984.1
ProteinModelPortal:E2RK50 Ensembl:ENSCAFT00000002150 GeneID:608268
KEGG:cfa:608268 NextBio:20893933 Uniprot:E2RK50
Length = 340
Score = 187 (70.9 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 50/174 (28%), Positives = 86/174 (49%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++ T
Sbjct: 102 TTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYSGGKIIFIDT 161
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F +D D + ++ + ++++ + + +
Sbjct: 162 ENTFRPDRLRDIADRFNVDHDA-VLDNVLYARAYTSEHQMELLDYVAAKFHEEAGI---F 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 218 KLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQM 270
>UNIPROTKB|F1SKQ1 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007286 "spermatid development" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0007286 GO:GO:0003677 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0007141 GO:GO:0000239 GO:GO:0008094 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144
GeneTree:ENSGT00550000075091 EMBL:FP102457 RefSeq:XP_003126070.1
Ensembl:ENSSSCT00000000109 GeneID:100522866 KEGG:ssc:100522866
Uniprot:F1SKQ1
Length = 340
Score = 187 (70.9 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 50/174 (28%), Positives = 86/174 (49%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++ T
Sbjct: 102 TTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYSGGKIIFIDT 161
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F +D D + ++ + ++++ + + +
Sbjct: 162 ENTFRPDRLRDIADRFNVDHDA-VLDNVLYARAYTSEHQMELLDYVAAKFHEEAGI---F 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 218 KLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQM 270
>RGD|1307611 [details] [associations]
symbol:Dmc1 "DMC1 dosage suppressor of mck1 homolog,
meiosis-specific homologous recombination (yeast)" species:10116
"Rattus norvegicus" [GO:0000239 "pachytene" evidence=IEA;ISO]
[GO:0000781 "chromosome, telomeric region" evidence=IEA;ISO]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA;ISO]
[GO:0001541 "ovarian follicle development" evidence=IEA;ISO]
[GO:0001556 "oocyte maturation" evidence=IEA;ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005694 "chromosome" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA;ISO]
[GO:0007276 "gamete generation" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0007286 "spermatid development"
evidence=IEA;ISO] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 RGD:1307611 GO:GO:0005524 GO:GO:0007286 GO:GO:0003677
GO:GO:0006281 GO:GO:0001541 GO:GO:0000794 GO:GO:0001556
GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0007141
GO:GO:0000239 EMBL:CH473950 GO:GO:0008094 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144 OrthoDB:EOG4F7NKC
GeneTree:ENSGT00550000075091 IPI:IPI00366298 RefSeq:NP_001124039.1
UniGene:Rn.45495 Ensembl:ENSRNOT00000018526 GeneID:362960
KEGG:rno:362960 UCSC:RGD:1307611 NextBio:681931 Uniprot:D3ZJ85
Length = 340
Score = 187 (70.9 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 49/174 (28%), Positives = 86/174 (49%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++ T
Sbjct: 102 TTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGADGYSGGKIIFIDT 161
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F +D D + ++ + ++++ + + +
Sbjct: 162 ENTFRPDRLRDIADRFNVDHDA-VLDNVLYARAYTSEHQMELLDYVAAKFHEEAGI---F 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+L+++DSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 218 KLLIVDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQM 270
>UNIPROTKB|F1NI95 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0001541 "ovarian follicle development" evidence=IEA]
[GO:0001556 "oocyte maturation" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0003677 GO:GO:0000794 GO:GO:0000781 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0007141 GO:GO:0000239 GO:GO:0008094
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GeneTree:ENSGT00550000075091
EMBL:AADN02006146 IPI:IPI00578251 Ensembl:ENSGALT00000019979
Uniprot:F1NI95
Length = 346
Score = 187 (70.9 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 50/174 (28%), Positives = 85/174 (48%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G D+ LGGGI +ITE E +GKTQ L ++AQLP G +++ T
Sbjct: 108 TTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGPKGYTGGKIIFIDT 167
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F +D D + ++ + ++++ + + +
Sbjct: 168 ENTFRPDRLRDIADRFNVDHDA-VLDNVLYARAYTSEHQMELLDYVAAKFHEEAGI---F 223
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 224 KLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQM 276
>UNIPROTKB|Q14565 [details] [associations]
symbol:DMC1 "Meiotic recombination protein DMC1/LIM15
homolog" species:9606 "Homo sapiens" [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000794 "condensed nuclear chromosome"
evidence=IEA] [GO:0001541 "ovarian follicle development"
evidence=IEA] [GO:0001556 "oocyte maturation" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007286 "spermatid
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005694 "chromosome" evidence=ISS] [GO:0007126
"meiosis" evidence=TAS] [GO:0007292 "female gamete generation"
evidence=TAS] [GO:0007283 "spermatogenesis" evidence=TAS]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0007286
GO:GO:0003677 GO:GO:0007283 Reactome:REACT_111183 GO:GO:0001541
GO:GO:0000794 GO:GO:0001556 GO:GO:0000781 GO:GO:0007292
GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0007141 GO:GO:0000239
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 EMBL:D63882 EMBL:D64108
EMBL:CR456486 EMBL:AK292617 EMBL:AY520538 EMBL:AL022320
EMBL:BC125163 EMBL:BC125164 IPI:IPI00031512 PIR:S62354
RefSeq:NP_008999.2 UniGene:Hs.339396 PDB:1V5W PDB:2ZJB PDBsum:1V5W
PDBsum:2ZJB ProteinModelPortal:Q14565 SMR:Q14565 DIP:DIP-24192N
IntAct:Q14565 MINT:MINT-3029876 STRING:Q14565 PhosphoSite:Q14565
DMDM:13878923 PaxDb:Q14565 PRIDE:Q14565 DNASU:11144
Ensembl:ENST00000216024 GeneID:11144 KEGG:hsa:11144 UCSC:uc003avz.1
CTD:11144 GeneCards:GC22M038914 HGNC:HGNC:2927 HPA:CAB015397
HPA:HPA001232 MIM:602721 neXtProt:NX_Q14565 PharmGKB:PA27377
HOVERGEN:HBG001504 InParanoid:Q14565 OrthoDB:EOG4F7NKC
PhylomeDB:Q14565 EvolutionaryTrace:Q14565 GenomeRNAi:11144
NextBio:42364 ArrayExpress:Q14565 Bgee:Q14565 CleanEx:HS_DMC1
Genevestigator:Q14565 GermOnline:ENSG00000100206 Uniprot:Q14565
Length = 340
Score = 186 (70.5 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 50/174 (28%), Positives = 86/174 (49%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++ T
Sbjct: 102 TTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDT 161
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F +D D + ++ + ++++ + + +
Sbjct: 162 ENTFRPDRLRDIADRFNVDHDA-VLDNVLYARAYTSEHQMELLDYVAAKFHEEAGI---F 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 218 KLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQM 270
>MGI|MGI:105393 [details] [associations]
symbol:Dmc1 "DMC1 dosage suppressor of mck1 homolog,
meiosis-specific homologous recombination" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=IDA]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0001541 "ovarian follicle development" evidence=IMP]
[GO:0001556 "oocyte maturation" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005694 "chromosome"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007129
"synapsis" evidence=IMP] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IMP] [GO:0007276 "gamete generation" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0007286 "spermatid
development" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 MGI:MGI:105393 GO:GO:0005524 GO:GO:0005654
GO:GO:0007286 GO:GO:0006281 GO:GO:0016887 Reactome:REACT_120463
GO:GO:0003690 GO:GO:0003697 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 Reactome:REACT_27235
SUPFAM:SSF47794 GO:GO:0007141 GO:GO:0000239 GO:GO:0008094
eggNOG:COG0468 HOGENOM:HOG000227426 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144 HOVERGEN:HBG001504
EMBL:D58419 EMBL:D64107 IPI:IPI00126394 PIR:JC4191
RefSeq:NP_034189.1 UniGene:Mm.2524 ProteinModelPortal:Q61880
SMR:Q61880 STRING:Q61880 PhosphoSite:Q61880 PRIDE:Q61880
Ensembl:ENSMUST00000023065 GeneID:13404 KEGG:mmu:13404
GeneTree:ENSGT00550000075091 InParanoid:Q61880 NextBio:283799
Bgee:Q61880 Genevestigator:Q61880 GermOnline:ENSMUSG00000022429
GO:GO:0000150 Uniprot:Q61880
Length = 340
Score = 186 (70.5 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 51/175 (29%), Positives = 86/175 (49%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++ T
Sbjct: 102 TTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGTGGYSGGKIIFIDT 161
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
E F RL ++ F DH D + ++ + ++++ + + +
Sbjct: 162 ENTFRPDRLRDIADRFNV--DHEAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGI--- 216
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 217 FKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQM 270
>UNIPROTKB|Q50LF6 [details] [associations]
symbol:tilDmc1 "RecA homolog Dmc1" species:8128
"Oreochromis niloticus" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 OMA:FFQDIDL InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 CTD:11144 HOVERGEN:HBG001504 GO:GO:0000150
EMBL:AERX01002235 EMBL:AB182646 RefSeq:XP_003438754.1
UniGene:Oni.44877 SMR:Q50LF6 Ensembl:ENSONIT00000024880
GeneID:100534532 Uniprot:Q50LF6
Length = 342
Score = 186 (70.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 50/184 (27%), Positives = 88/184 (47%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G D+ LGGG+ +ITE E +GKTQ L ++AQLP G +++ T
Sbjct: 104 TTGSQEFDKLLGGGVESMAITEAFGEFRTGKTQLSHTLCVTAQLPGEDGYSGGKVIFIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F +D D + ++ + ++++ + +
Sbjct: 164 ENTFRPDRLRDIADRFNVDHDA-VLDNVLYARAYTSEHQMELLDFVAAKFHEEGGV---F 219
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV +TNQ+ +P
Sbjct: 220 KLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFITNQMT--ADP 276
Query: 201 NEGV 204
G+
Sbjct: 277 GAGM 280
>UNIPROTKB|Q6BP40 [details] [associations]
symbol:DEHA2E16742g "DEHA2E16742p" species:284592
"Debaryomyces hansenii CBS767" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0016887 GO:GO:0003690 GO:GO:0003697
GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094 EMBL:CR382137
GenomeReviews:CR382137_GR HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 RefSeq:XP_460030.2 ProteinModelPortal:Q6BP40
STRING:Q6BP40 GeneID:2902232 KEGG:dha:DEHA2E16742g Uniprot:Q6BP40
Length = 330
Score = 185 (70.2 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 51/174 (29%), Positives = 89/174 (51%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
+ G +D LGGG+ SITE+ E GKTQ C L ++AQLP GG Y+ T
Sbjct: 94 STGSKQLDDVLGGGVSSMSITEVFGEFRCGKTQLCHTLCVTAQLPKEMGGSEGKVAYIDT 153
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R+ ++ F+ D + + ++++S Q+ ++ ++ + +
Sbjct: 154 EGTFRPDRIRSIAERFQVDADACLENISYARALNSEHQM-ELAEQLGLQFADGT-----Y 207
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
RL+V+DSI A FR D+ + ++ L +S +++ +A + +AV +TNQV
Sbjct: 208 RLLVVDSIMACFRVDYSGRGELNDRQQKLNQHLSSLIR-LAEDYNVAVFLTNQV 260
>FB|FBgn0003482 [details] [associations]
symbol:spn-D "spindle D" species:7227 "Drosophila
melanogaster" [GO:0008298 "intracellular mRNA localization"
evidence=IMP;TAS] [GO:0048477 "oogenesis" evidence=IGI;TAS]
[GO:0007294 "germarium-derived oocyte fate determination"
evidence=IGI] [GO:0009949 "polarity specification of
anterior/posterior axis" evidence=IMP] [GO:0009951 "polarity
specification of dorsal/ventral axis" evidence=IMP] [GO:0030720
"oocyte localization involved in germarium-derived egg chamber
formation" evidence=IMP] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=TAS] [GO:0009994 "oocyte differentiation" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IMP] [GO:0046843 "dorsal appendage formation"
evidence=IMP] InterPro:IPR020588 PROSITE:PS50162 EMBL:AE014297
GO:GO:0005524 GO:GO:0009949 GO:GO:0007294 GO:GO:0003677
GO:GO:0006200 GO:GO:0008298 GO:GO:0046843 GO:GO:0031023
GO:GO:0030720 GO:GO:0030717 GO:GO:0007131 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 GeneTree:ENSGT00550000074609
KO:K10870 GO:GO:0009951 HSSP:Q06609 EMBL:AY071162 EMBL:AY257540
RefSeq:NP_733200.1 UniGene:Dm.6085 SMR:Q8SZ30 STRING:Q8SZ30
EnsemblMetazoa:FBtr0085116 GeneID:318579 KEGG:dme:Dmel_CG31069
UCSC:CG31069-RA CTD:318579 FlyBase:FBgn0003482 InParanoid:Q8SZ30
OMA:CLNVQIP OrthoDB:EOG4MKKZ1 GenomeRNAi:318579 NextBio:845512
Uniprot:Q8SZ30
Length = 270
Score = 174 (66.3 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 48/142 (33%), Positives = 72/142 (50%)
Query: 17 TEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSL 76
+ K G +D GGGI + EL+ SG+GKTQ CLQL L+ Q+P + GGL S+L
Sbjct: 43 SNKILTGKKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSAL 102
Query: 77 YLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYI---FVQSVHSV--DQLLDIMPKIESFIK 131
++ T F RL L+ H ++ +Q +H V +L +M + S +
Sbjct: 103 FIDTRQDFHPDRLMGLALKLERQYAHRVPEFKAHKMLQKIHYVRCPKLDQLMATVLSCHR 162
Query: 132 NSSNSRLPIRLIVIDSIAALFR 153
+ + I+LIVIDS+A R
Sbjct: 163 HLVDHP-DIKLIVIDSLAFTLR 183
Score = 38 (18.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 224 PALGIAWANCVNSRLFLSRNED 245
PALG ++ +N R++ S + +
Sbjct: 232 PALGDLHSHLINERIWFSGSSE 253
>MGI|MGI:2150020 [details] [associations]
symbol:Rad51c "RAD51 homolog C" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007066 "female meiosis sister chromatid cohesion"
evidence=IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008821
"crossover junction endodeoxyribonuclease activity" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048476 "Holliday junction resolvase complex" evidence=IC]
InterPro:IPR020588 PROSITE:PS50162 MGI:MGI:2150020 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0007283 EMBL:CH466556 GO:GO:0007131
GO:GO:0007141 GO:GO:0008821 GO:GO:0008094 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066 GO:GO:0048476
EMBL:AL596130 GeneTree:ENSGT00550000074609 HSSP:O74036 CTD:5889
HOVERGEN:HBG055764 KO:K10870 OMA:QRDLVSF OrthoDB:EOG4CRM09
EMBL:AF324883 EMBL:AK076551 EMBL:CU406989 EMBL:CU406969
EMBL:AL669902 EMBL:BC090648 EMBL:BC141034 IPI:IPI00125672
IPI:IPI00226086 RefSeq:NP_444499.1 UniGene:Mm.37376
ProteinModelPortal:Q924H5 SMR:Q924H5 STRING:Q924H5 PRIDE:Q924H5
Ensembl:ENSMUST00000007790 Ensembl:ENSMUST00000067692 GeneID:114714
KEGG:mmu:114714 UCSC:uc007ktp.2 InParanoid:Q5SX32 NextBio:368733
Bgee:Q924H5 Genevestigator:Q924H5 Uniprot:Q924H5
Length = 366
Score = 181 (68.8 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 57/215 (26%), Positives = 102/215 (47%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T LL+ T C +D LGGGIP TE+ G GKTQ C+QL + Q+P
Sbjct: 77 TALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIP 136
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDHNPCDYIFVQSVHSVDQLL 120
GG++ ++++ TE F + R+ L+ H + H ++ +++ +L
Sbjct: 137 ECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEHQKALKDFTLENIL 196
Query: 121 ---------DIMPKI-ESFIKNSSNSRLP-IRLIVIDSIAALFRSDFDNTMDDLKKRSFL 169
D + + ++ S P ++L++ID IA FR D ++DL R+ L
Sbjct: 197 SHIYYFRCHDYTELLAQVYLLPDFLSDHPKVQLVIIDGIAFPFRHD----LEDLSLRTRL 252
Query: 170 FFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGV 204
++ + ++A LAV++TNQ+ ++ N+ +
Sbjct: 253 LNGLAQQMISLANNHRLAVILTNQMTTKIDKNQAL 287
Score = 39 (18.8 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 222 ICPALGIAWANCVNSRL 238
+ PALG +W + RL
Sbjct: 288 LVPALGESWGHAATIRL 304
>UNIPROTKB|Q9C0P6 [details] [associations]
symbol:dmc1 "Putative DMC1 protein" species:5322 "Pleurotus
ostreatus" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150 HSSP:Q06609
EMBL:AJ311528 EMBL:AJ308557 ProteinModelPortal:Q9C0P6
Uniprot:Q9C0P6
Length = 347
Score = 184 (69.8 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 51/174 (29%), Positives = 86/174 (49%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
+ G +D LGGGI S++E+ E +GKTQ +++ AQLP GG S Y+ T
Sbjct: 111 STGSKNVDVILGGGIMSQSVSEVYGEFRTGKTQLAHTMSVVAQLPPDLGGASGKVAYIDT 170
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R+ ++ F + ++ ++ +S Q+ I F ++
Sbjct: 171 EGTFRPDRIRSIAERFGVDGSLALENILYARAFNSEHQMELINECSMRFAEDKD-----F 225
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
RL+++DSI ALFR D+ +L +R ++ L ++ + +AVL+TNQV
Sbjct: 226 RLLIVDSIMALFRVDYSGR-GELSERQQKLAQMLSRLTKLSEEYNIAVLLTNQV 278
>UNIPROTKB|F1M525 [details] [associations]
symbol:Rad51c "Protein Rad51c" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1563765
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 IPI:IPI00951574 Ensembl:ENSRNOT00000065976
ArrayExpress:F1M525 Uniprot:F1M525
Length = 336
Score = 178 (67.7 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 57/213 (26%), Positives = 98/213 (46%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T LL+ T C +D LGGGIP TE+ G GKTQ C+QL + Q+P
Sbjct: 47 TALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIP 106
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDHNPCDYIFVQSVHSVDQLL 120
GG++ ++++ TE F + R+ L+ H + H + +++ +L
Sbjct: 107 ECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEQQKALKDFTLENIL 166
Query: 121 ---------DIMPKIES--FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFL 169
D + + + + ++L++ID IA FR D +DDL R+ L
Sbjct: 167 SHIYYFRCHDYTELLAQVYLLPDFLSDHSKVQLVIIDGIAFPFRHD----LDDLFLRTRL 222
Query: 170 FFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNE 202
++ L ++A LAV++TNQ+ ++ N+
Sbjct: 223 LNGLAQQLISLANKHRLAVILTNQMTTKIDKNQ 255
Score = 39 (18.8 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 222 ICPALGIAWANCVNSRL 238
+ PALG +W + RL
Sbjct: 258 LVPALGESWGHAATIRL 274
>UNIPROTKB|G3V399 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 EMBL:AL049840 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 HGNC:HGNC:12830
ProteinModelPortal:G3V399 SMR:G3V399 Ensembl:ENST00000553361
ArrayExpress:G3V399 Bgee:G3V399 Uniprot:G3V399
Length = 150
Score = 164 (62.8 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P + ITEL S +GKTQ LQL L+ Q P HGGL A
Sbjct: 76 PTQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEA 135
Query: 74 SSLY 77
Y
Sbjct: 136 EWQY 139
>RGD|1563603 [details] [associations]
symbol:Rad51 "RAD51 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISO] [GO:0000793 "condensed
chromosome" evidence=ISO] [GO:0000794 "condensed nuclear
chromosome" evidence=ISO] [GO:0000800 "lateral element"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003697
"single-stranded DNA binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006268 "DNA unwinding involved in replication"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0007126
"meiosis" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0016605 "PML body" evidence=ISO] [GO:0042493
"response to drug" evidence=IEP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0043142 "single-stranded DNA-dependent
ATPase activity" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] [GO:0051106 "positive regulation of DNA
ligation" evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 RGD:1563603
GO:GO:0005524 GO:GO:0005634 GO:GO:0042493 GO:GO:0003684
GO:GO:0006281 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
PANTHER:PTHR22942:SF12 IPI:IPI00948014 Ensembl:ENSRNOT00000068607
UCSC:RGD:1563603 ArrayExpress:F1LZR2 Uniprot:F1LZR2
Length = 236
Score = 170 (64.9 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 46/156 (29%), Positives = 77/156 (49%)
Query: 40 ITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPS 99
ITE+ E +GKTQ C L ++ QLP GG ++Y+ TE F RL ++ + S
Sbjct: 1 ITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLS 60
Query: 100 NDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNT 159
+ D + + D ++ + + + S + L+++DS AL+R+D+
Sbjct: 61 GS-DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYA-----LLIVDSATALYRTDYSGR 114
Query: 160 MDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L R + ML +A FG+AV++TNQVV
Sbjct: 115 -GELSARQMHLARFLRMLLRLADEFGVAVVITNQVV 149
>RGD|1563765 [details] [associations]
symbol:Rad51c "Rad51 homolog c (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0006281 "DNA repair"
evidence=IEA;ISO] [GO:0006310 "DNA recombination" evidence=ISO]
[GO:0007066 "female meiosis sister chromatid cohesion"
evidence=IEA;ISO] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA;ISO] [GO:0007141 "male meiosis I" evidence=IEA;ISO]
[GO:0007283 "spermatogenesis" evidence=IEA;ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008821
"crossover junction endodeoxyribonuclease activity"
evidence=IEA;ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA;ISO] InterPro:IPR020588 PROSITE:PS50162 RGD:1563765
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 EMBL:CH473948
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 CTD:5889 KO:K10870
OMA:QRDLVSF RefSeq:NP_001123249.1 UniGene:Rn.160309
Ensembl:ENSRNOT00000008846 GeneID:497976 KEGG:rno:497976
NextBio:698267 Uniprot:G3V6U0
Length = 366
Score = 178 (67.7 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 57/213 (26%), Positives = 98/213 (46%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T LL+ T C +D LGGGIP TE+ G GKTQ C+QL + Q+P
Sbjct: 77 TALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIP 136
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDHNPCDYIFVQSVHSVDQLL 120
GG++ ++++ TE F + R+ L+ H + H + +++ +L
Sbjct: 137 ECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEQQKALKDFTLENIL 196
Query: 121 ---------DIMPKIES--FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFL 169
D + + + + ++L++ID IA FR D +DDL R+ L
Sbjct: 197 SHIYYFRCHDYTELLAQVYLLPDFLSDHSKVQLVIIDGIAFPFRHD----LDDLFLRTRL 252
Query: 170 FFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNE 202
++ L ++A LAV++TNQ+ ++ N+
Sbjct: 253 LNGLAQQLISLANKHRLAVILTNQMTTKIDKNQ 285
Score = 39 (18.8 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 222 ICPALGIAWANCVNSRL 238
+ PALG +W + RL
Sbjct: 288 LVPALGESWGHAATIRL 304
>DICTYBASE|DDB_G0284507 [details] [associations]
symbol:DDB_G0284507 "putative Rad51C protein"
species:44689 "Dictyostelium discoideum" [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
dictyBase:DDB_G0284507 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000153_GR GO:GO:0003677 GO:GO:0006281 GO:GO:0006310
EMBL:AAFI02000066 GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
RefSeq:XP_638535.1 HSSP:Q55075 ProteinModelPortal:Q54PJ7
EnsemblProtists:DDB0232315 GeneID:8624628 KEGG:ddi:DDB_G0284507
InParanoid:Q54PJ7 KO:K10870 OMA:VREMATH Uniprot:Q54PJ7
Length = 381
Score = 182 (69.1 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 57/193 (29%), Positives = 92/193 (47%)
Query: 24 CPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFP 83
C ID+ L GG P ITE+ G GKT QL ++ +P GG+ ++Y+ TE
Sbjct: 68 CSEIDQMLNGGTPLKKITEICGVPGIGKTNMAFQLLVNTSIPFDLGGVQGKAIYIDTEGS 127
Query: 84 FPMRRLHQLS-HTFRP------SNDHNPCDYI-FVQSV------HSVDQLLDIMPKIESF 129
+ +R+ +++ H N YI V++V + V ++I+ I
Sbjct: 128 YSCQRVREMATHLVNHLECVLLKNPMTQTTYIPTVETVLNSIYYYRVYHYIEIISLIHQL 187
Query: 130 IKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVL 189
++ ++LIV+DSI FR DF + L+ RS L ++ L +A + LAV+
Sbjct: 188 PLFLEKNK-DVKLIVVDSITYPFRCDFKDM--GLRTRSLL--SLAQNLMNIATRYNLAVV 242
Query: 190 VTNQVVDLMEPNE 202
V NQV + PN+
Sbjct: 243 VMNQVTTKISPNQ 255
>UNIPROTKB|Q6FKF0 [details] [associations]
symbol:CAGL0L12100g "Similar to uniprot|P25453
Saccharomyces cerevisiae YER179w meiosis-specific protein"
species:284593 "Candida glabrata CBS 138" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 EMBL:CR380958
GenomeReviews:CR380958_GR KO:K10872 OMA:FFQDIDL InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
RefSeq:XP_449294.1 ProteinModelPortal:Q6FKF0 GeneID:2890684
KEGG:cgr:CAGL0L12100g Uniprot:Q6FKF0
Length = 334
Score = 179 (68.1 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 54/174 (31%), Positives = 88/174 (50%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
+ G +D LGGGI SITE+ E GKTQ L ++AQLP S GG ++ T
Sbjct: 97 STGSKQLDSVLGGGIMTMSITEVFGEFRCGKTQMSHTLCVTAQLPKSMGGGEGKVAFIDT 156
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R+ Q++ + D + + ++++S Q+ +++ ++ + + S +
Sbjct: 157 EGTFRPERIKQIAERYDLDPDSCLENITYARALNSEHQM-ELVEQLGEELSSGSYT---- 211
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
LI++DSI A FR D+ +L +R + L +A F LAV +TNQV
Sbjct: 212 -LIIVDSIMANFRVDYCGR-GELNERQQKLNQHLFKLNRLAEEFNLAVFMTNQV 263
>GENEDB_PFALCIPARUM|PF11_0087 [details] [associations]
symbol:PF11_0087 "Rad51 homolog, putative"
species:5833 "Plasmodium falciparum" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0003684 GO:GO:0006281
SUPFAM:SSF47794 EMBL:AE014186 GO:GO:0008094 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 KO:K04482 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 ProtClustDB:PTZ00035 GenomeReviews:AE014186_GR
RefSeq:XP_001347762.2 ProteinModelPortal:Q8IIS8 SMR:Q8IIS8
EnsemblProtists:PF11_0087:mRNA GeneID:810638 KEGG:pfa:PF11_0087
EuPathDB:PlasmoDB:PF3D7_1107400 Uniprot:Q8IIS8
Length = 350
Score = 179 (68.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 54/180 (30%), Positives = 90/180 (50%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G +D L GGI ITEL E +GK+Q C L ++ QLP G L++
Sbjct: 111 KFTTGSKQLDALLKGGIETGGITELFGEFRTGKSQLCHTLAITCQLPIEQSGGEGKCLWI 170
Query: 79 HTEFPFPMRRLHQLSHTF--RPSNDHNPCDYIFVQSV-HSVDQLLDIMPKIESFIKNSSN 135
TE F R+ ++ + P++ N Y + H + L+D + ++
Sbjct: 171 DTEGTFRPERIVAIAKRYGLHPTDCLNNIAYAKAYNCDHQTELLIDASAMM-------AD 223
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+R L+++DS AL+RS++ + ++S L + G L+ +A +G+AV++TNQVV
Sbjct: 224 ARFA--LLIVDSATALYRSEYIGRGELANRQSHLCRFLRG-LQRIADIYGVAVIITNQVV 280
>UNIPROTKB|Q8IIS8 [details] [associations]
symbol:Rad51 "Rad51 homolog" species:36329 "Plasmodium
falciparum 3D7" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0003684
GO:GO:0006281 SUPFAM:SSF47794 EMBL:AE014186 GO:GO:0008094
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150 KO:K04482
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 ProtClustDB:PTZ00035
GenomeReviews:AE014186_GR RefSeq:XP_001347762.2
ProteinModelPortal:Q8IIS8 SMR:Q8IIS8 EnsemblProtists:PF11_0087:mRNA
GeneID:810638 KEGG:pfa:PF11_0087 EuPathDB:PlasmoDB:PF3D7_1107400
Uniprot:Q8IIS8
Length = 350
Score = 179 (68.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 54/180 (30%), Positives = 90/180 (50%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G +D L GGI ITEL E +GK+Q C L ++ QLP G L++
Sbjct: 111 KFTTGSKQLDALLKGGIETGGITELFGEFRTGKSQLCHTLAITCQLPIEQSGGEGKCLWI 170
Query: 79 HTEFPFPMRRLHQLSHTF--RPSNDHNPCDYIFVQSV-HSVDQLLDIMPKIESFIKNSSN 135
TE F R+ ++ + P++ N Y + H + L+D + ++
Sbjct: 171 DTEGTFRPERIVAIAKRYGLHPTDCLNNIAYAKAYNCDHQTELLIDASAMM-------AD 223
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+R L+++DS AL+RS++ + ++S L + G L+ +A +G+AV++TNQVV
Sbjct: 224 ARFA--LLIVDSATALYRSEYIGRGELANRQSHLCRFLRG-LQRIADIYGVAVIITNQVV 280
>UNIPROTKB|Q50LF7 [details] [associations]
symbol:eDmc1 "RecA homolog DMC1" species:7937 "Anguilla
japonica" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238
HOVERGEN:HBG001504 GO:GO:0000150 EMBL:AB182645 EMBL:AB201845
ProteinModelPortal:Q50LF7 SMR:Q50LF7 Uniprot:Q50LF7
Length = 339
Score = 178 (67.7 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 50/184 (27%), Positives = 87/184 (47%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G D+ +GGGI +ITE E +GKTQ L ++AQLP G +++ T
Sbjct: 101 TTGSLEFDKLIGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGEDGYTGGKVIFIDT 160
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F + D + ++ + ++++ + +
Sbjct: 161 ENTFRPDRLKDIADRFSVDQEA-VLDNVLYARAYTSEHQMELLDFVAAKFHEEGGV---F 216
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+ +P
Sbjct: 217 KLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT--ADP 273
Query: 201 NEGV 204
G+
Sbjct: 274 GAGM 277
>UNIPROTKB|Q9GRA3 [details] [associations]
symbol:CnDmc1 "DMC1 homologue CnDMC1" species:6087 "Hydra
vulgaris" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150 HSSP:Q06609
EMBL:AB047581 ProteinModelPortal:Q9GRA3 SMR:Q9GRA3 Uniprot:Q9GRA3
Length = 331
Score = 177 (67.4 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 48/176 (27%), Positives = 88/176 (50%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D+ LGGGI SITE E +GKTQ L ++AQLP + +++
Sbjct: 91 RISTGSMELDKLLGGGIESMSITEAFGEFRTGKTQISHTLCVTAQLPGPNNYPGGKVMFI 150
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F ++ + +F ++ S +Q +++ + + +
Sbjct: 151 DTENTFRPNRLRSIADRFNLDHEAMLGNIVFCRAYTS-EQQFEVLDMVSAKFHEEAGV-- 207
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+L++IDSI ALFR D+ +L R ++ L+ ++ + +AV +TNQ+
Sbjct: 208 -FKLLIIDSIMALFRVDYSGR-GELADRQQKLGQMLSKLQKISEEYNVAVWITNQM 261
>SGD|S000000981 [details] [associations]
symbol:DMC1 "Meiosis-specific protein required for repair of
double-strand breaks" species:4932 "Saccharomyces cerevisiae"
[GO:0003697 "single-stranded DNA binding" evidence=IDA] [GO:0007126
"meiosis" evidence=IEA;IMP] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0000709 "meiotic joint molecule formation"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0030435
"sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 SGD:S000000981 GO:GO:0005524
GO:GO:0016887 GO:GO:0030435 EMBL:BK006939 GO:GO:0003690
GO:GO:0003697 GO:GO:0000794 EMBL:U18922 SUPFAM:SSF47794
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GeneTree:ENSGT00550000075091
GO:GO:0000150 OrthoDB:EOG43XZC8 GO:GO:0000709 EMBL:M87549
EMBL:D10865 PIR:A38214 RefSeq:NP_011106.1 ProteinModelPortal:P25453
SMR:P25453 DIP:DIP-110N IntAct:P25453 MINT:MINT-387175
STRING:P25453 PeptideAtlas:P25453 EnsemblFungi:YER179W
GeneID:856926 KEGG:sce:YER179W CYGD:YER179w NextBio:983398
Genevestigator:P25453 GermOnline:YER179W Uniprot:P25453
Length = 334
Score = 177 (67.4 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 60/191 (31%), Positives = 88/191 (46%)
Query: 4 PMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQ 63
P T Q LD + G +D LGGGI SITE+ E GKTQ L ++ Q
Sbjct: 82 PATVQ--LDIRQRVYSLSTGSKQLDSILGGGIMTMSITEVFGEFRCGKTQMSHTLCVTTQ 139
Query: 64 LPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIM 123
LP GG Y+ TE F R+ Q++ + + + + ++++S Q M
Sbjct: 140 LPREMGGGEGKVAYIDTEGTFRPERIKQIAEGYELDPESCLANVSYARALNSEHQ----M 195
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
+E + S+ RLIV+DSI A FR D+ +L +R + L +A
Sbjct: 196 ELVEQLGEELSSG--DYRLIVVDSIMANFRVDYCGR-GELSERQQKLNQHLFKLNRLAEE 252
Query: 184 FGLAVLVTNQV 194
F +AV +TNQV
Sbjct: 253 FNVAVFLTNQV 263
>UNIPROTKB|Q4WAR2 [details] [associations]
symbol:AFUA_7G02200 "Meiotic recombination protein (Dmc1),
putative" species:330879 "Aspergillus fumigatus Af293" [GO:0000150
"recombinase activity" evidence=ISS] [GO:0003690 "double-stranded
DNA binding" evidence=ISS] [GO:0003697 "single-stranded DNA
binding" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094
HOGENOM:HOG000227426 KO:K10872 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
EMBL:AAHF01000015 RefSeq:XP_746712.1 ProteinModelPortal:Q4WAR2
STRING:Q4WAR2 EnsemblFungi:CADAFUAT00001154 GeneID:3504290
KEGG:afm:AFUA_7G02200 OMA:HAASTRI Uniprot:Q4WAR2
Length = 338
Score = 172 (65.6 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 53/176 (30%), Positives = 80/176 (45%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K + G D LGGG SI+E+ E GKTQ +++ AQLP GG Y+
Sbjct: 98 KISTGSKQFDSILGGGFQSMSISEVFGEFRCGKTQLSHTMSVVAQLPKEMGGADGKVAYI 157
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ F D + + ++++S QL +++ +
Sbjct: 158 DTEGTFRPERIAQIAERFSVDPDSAQENIAYARALNSEHQL-ELLNTLSREFAGGE---- 212
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
RL++IDSI FR D+ +L R + L MA F + VL+TNQV
Sbjct: 213 -YRLLIIDSIMNCFRVDYCGR-GELADRQQKLNQFLMRLAHMAEEFNVCVLMTNQV 266
>CGD|CAL0005415 [details] [associations]
symbol:RAD57 species:5476 "Candida albicans" [GO:0033062
"Rhp55-Rhp57 complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000722 "telomere maintenance via recombination"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0030491 "heteroduplex formation" evidence=IEA]
[GO:0000707 "meiotic DNA recombinase assembly" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 CGD:CAL0005415 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 Pfam:PF08423 EMBL:AACQ01000076 EMBL:AACQ01000075
KO:K10958 RefSeq:XP_715957.1 RefSeq:XP_716015.1
ProteinModelPortal:Q5A2U1 GeneID:3642333 GeneID:3642354
KEGG:cal:CaO19.2174 KEGG:cal:CaO19.9720 Uniprot:Q5A2U1
Length = 511
Score = 152 (58.6 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 51/167 (30%), Positives = 83/167 (49%)
Query: 4 PMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQ 63
P + +LLD+ E + G P IDR LGGGIP +TE+ SG GK+ F QL +
Sbjct: 73 PTSVNSLLDS----EFISTGLPSIDRELGGGIPIGEVTEIFGASGCGKSHFLFQLLSNCG 128
Query: 64 LPSSHGGLSASSLYLHTEFPFPMRRLHQL--SHTFRPSNDHNPCDYIFVQSVHSVDQLLD 121
S ++ ++Y+ TE +RL ++ D + YI+ Q + S D +L
Sbjct: 129 KEFS----TSKNIYISTESFLETKRLKDFIGRNSSNIDTDLDRISYIYCQDLESQDHILF 184
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDD--LKKR 166
++ +S + +L+V+DSIA FR + D+ M+ LK++
Sbjct: 185 TQLPLKL---DSDKGKT--KLLVLDSIAQHFRRE-DSIMNSTYLKEK 225
Score = 54 (24.1 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 220 RPICPALGIAWANCVNSRLFLSRNEDFVVREN 251
+ I P LG WA + +R+ LS+ +++ N
Sbjct: 409 KKIVPTLGYPWATRIKNRIMLSKVYKPILKSN 440
Score = 45 (20.9 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 177 LKAMAVGFGLAVLVTNQVVDLMEPNEG 203
L +A F +A+++ NQV D + G
Sbjct: 276 LSRLAQDFNIAIVIVNQVSDYSFESSG 302
>UNIPROTKB|Q0MR21 [details] [associations]
symbol:Q0MR21 "DMC1-like protein" species:37727
"Talaromyces marneffei" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
EMBL:DQ863299 ProteinModelPortal:Q0MR21 Uniprot:Q0MR21
Length = 337
Score = 171 (65.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 53/176 (30%), Positives = 85/176 (48%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K + G D LGGG +SI+E+ E GKTQ +++ AQLP GG Y+
Sbjct: 97 KISTGSKQFDTILGGGFQSSSISEVYGEFRCGKTQLSHTMSVIAQLPKEMGGGEGKVAYI 156
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ + + + + ++++S QL +++ + K + +
Sbjct: 157 DTEGTFRPDRIAQIAERYGLDAESTQENISYARALNSEHQL-ELLNTLS---KEFAGGQY 212
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
RL+VIDSI FR DF +L +R + L +A F + VL+TNQV
Sbjct: 213 --RLLVIDSIMNCFRVDFSGR-GELAERQQKLNQFLIRLSHLAEEFNVCVLMTNQV 265
>TAIR|locus:2825233 [details] [associations]
symbol:RAD51D "homolog of RAD51 D" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=ISS;RCA;IMP] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016444
"somatic cell DNA recombination" evidence=IMP] [GO:1900426
"positive regulation of defense response to bacterium"
evidence=IMP] [GO:0006310 "DNA recombination" evidence=RCA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006281 EMBL:AC007583 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 Pfam:PF08423 EMBL:AJ549434
EMBL:AB194811 IPI:IPI00533353 PIR:H86212 RefSeq:NP_172254.2
UniGene:At.26372 ProteinModelPortal:Q9LQQ2 SMR:Q9LQQ2 STRING:Q9LQQ2
PRIDE:Q9LQQ2 EnsemblPlants:AT1G07745.1 GeneID:837289
KEGG:ath:AT1G07745 GeneFarm:4787 TAIR:At1g07745
HOGENOM:HOG000242993 InParanoid:Q9LQQ2 KO:K10871 OMA:RIKVERI
PhylomeDB:Q9LQQ2 ProtClustDB:CLSN2699036 Genevestigator:Q9LQQ2
GermOnline:AT1G07745 GO:GO:0002831 GO:GO:0016444 Uniprot:Q9LQQ2
Length = 322
Score = 160 (61.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 56/172 (32%), Positives = 84/172 (48%)
Query: 28 DRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMR 87
D L GG +TELV S SGKTQFC+Q +A + +H G LYL T F R
Sbjct: 97 DSLLQGGFREGQLTELVGPSSSGKTQFCMQA--AASVAENHLG---RVLYLDTGNSFSAR 151
Query: 88 RLHQ-LSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIK---NSSNSRLPIRLI 143
R+ Q + + + I +V+ + L D + +E ++ N + SRL RL+
Sbjct: 152 RIAQFICSSSDATLGQKVMSRILCHTVYDIYTLFDTLQDLEITLRLQMNVNESRL--RLL 209
Query: 144 VIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
V+DSI++L + + R+ L I +LK +A +A+LVTN V
Sbjct: 210 VVDSISSLITPILGGSGS--QGRA-LMVAIGYLLKKLAHEHSIAILVTNHTV 258
Score = 46 (21.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 224 PALGIAWANCVNSRLFLSRN 243
PALG W + + RL LSR+
Sbjct: 269 PALGETWKSIPHVRLSLSRD 288
>ASPGD|ASPL0000094064 [details] [associations]
symbol:AN11929 species:162425 "Emericella nidulans"
[GO:0032545 "CURI complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0034456 "UTP-C complex" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000028 "ribosomal small
subunit assembly" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR012677
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0006281 Gene3D:3.30.70.330 EMBL:BN001306
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 KO:K10872
InterPro:IPR013632 Pfam:PF08423 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 174 (66.3 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 54/176 (30%), Positives = 80/176 (45%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G D LGGG SI+E+ E GKTQ +++ AQLP GG Y+
Sbjct: 97 RISTGSKQFDSILGGGFQSMSISEVFGEFRCGKTQLSHTMSVVAQLPKDMGGAEGKVAYI 156
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ F D + + ++++S QL + + F+
Sbjct: 157 DTEGTFRPERIGQIAERFGVDPDSAKENIAYARALNSEHQLELLNTLSKEFVGGE----- 211
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
RL++IDSI FR DF +L R + L MA F + VL+TNQV
Sbjct: 212 -YRLLIIDSIMNCFRVDFCGR-GELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQV 265
>ASPGD|ASPL0000098803 [details] [associations]
symbol:AN11930 species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000150 "recombinase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0006311 "meiotic gene conversion" evidence=IEA]
[GO:0000709 "meiotic joint molecule formation" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR012677 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
Gene3D:3.30.70.330 EMBL:BN001306 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094
eggNOG:COG0468 KO:K10872 InterPro:IPR013632 Pfam:PF08423
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 174 (66.3 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 54/176 (30%), Positives = 80/176 (45%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G D LGGG SI+E+ E GKTQ +++ AQLP GG Y+
Sbjct: 97 RISTGSKQFDSILGGGFQSMSISEVFGEFRCGKTQLSHTMSVVAQLPKDMGGAEGKVAYI 156
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ F D + + ++++S QL + + F+
Sbjct: 157 DTEGTFRPERIGQIAERFGVDPDSAKENIAYARALNSEHQLELLNTLSKEFVGGE----- 211
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
RL++IDSI FR DF +L R + L MA F + VL+TNQV
Sbjct: 212 -YRLLIIDSIMNCFRVDFCGR-GELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQV 265
>UNIPROTKB|Q5ARI8 [details] [associations]
symbol:AN9092.2 "Meiotic recombination protein (Dmc1),
putative (AFU_orthologue; AFUA_7G02200)" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR012677
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0006281 Gene3D:3.30.70.330 EMBL:BN001306
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 KO:K10872
InterPro:IPR013632 Pfam:PF08423 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 174 (66.3 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 54/176 (30%), Positives = 80/176 (45%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G D LGGG SI+E+ E GKTQ +++ AQLP GG Y+
Sbjct: 97 RISTGSKQFDSILGGGFQSMSISEVFGEFRCGKTQLSHTMSVVAQLPKDMGGAEGKVAYI 156
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ F D + + ++++S QL + + F+
Sbjct: 157 DTEGTFRPERIGQIAERFGVDPDSAKENIAYARALNSEHQLELLNTLSKEFVGGE----- 211
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
RL++IDSI FR DF +L R + L MA F + VL+TNQV
Sbjct: 212 -YRLLIIDSIMNCFRVDFCGR-GELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQV 265
>UNIPROTKB|Q74ZU7 [details] [associations]
symbol:AGR101C "AGR101Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0006281 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0000794 EMBL:AE016820 GenomeReviews:AE016820_GR
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 GO:GO:0000709 RefSeq:NP_986767.1 HSSP:Q06609
ProteinModelPortal:Q74ZU7 STRING:Q74ZU7 EnsemblFungi:AAS54591
GeneID:4623069 KEGG:ago:AGOS_AGR101C PhylomeDB:Q74ZU7
Uniprot:Q74ZU7
Length = 333
Score = 168 (64.2 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 51/176 (28%), Positives = 88/176 (50%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
+ G +D LGGG+ SITE+ E GKTQ L ++AQLP GG Y+ T
Sbjct: 96 STGSKQLDSILGGGVMTMSITEVFGEFRCGKTQMSHTLCVTAQLPREMGGGEGKVAYIDT 155
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPC--DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F R+ Q++ + D + C + + ++++S Q+ +++ ++ + +
Sbjct: 156 EGTFRPERIKQIAARY--DLDPDACLENVSYARALNSEHQM-ELVEQLGQELASGD---- 208
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
RL+++DSI A FR D+ +L +R + L +A + +AV +TNQV
Sbjct: 209 -YRLLIVDSIMANFRVDYCGR-GELNERQQKLNQHLSRLNRVAEEYNVAVFMTNQV 262
>UNIPROTKB|O75771 [details] [associations]
symbol:RAD51D "DNA repair protein RAD51 homolog 4"
species:9606 "Homo sapiens" [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006281 EMBL:CH471147
GO:GO:0007131 Orphanet:145 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 EMBL:AC022916 KO:K10871 CTD:5892
HOGENOM:HOG000049134 HOVERGEN:HBG057455 OMA:QARTQDE
OrthoDB:EOG4K0QP3 EMBL:Y15572 EMBL:AF034956 EMBL:AB013341
EMBL:AB016223 EMBL:AB016224 EMBL:AB016225 EMBL:AB018360
EMBL:AB018361 EMBL:AB018362 EMBL:AB018363 EMBL:AB020412
EMBL:AY623116 EMBL:AK296241 EMBL:BC014422 EMBL:AL117459
IPI:IPI00216381 IPI:IPI00216382 IPI:IPI00216383 IPI:IPI00216384
IPI:IPI00216386 IPI:IPI00291454 IPI:IPI00411326 IPI:IPI00791891
PIR:T17247 RefSeq:NP_001136043.1 RefSeq:NP_002869.3
RefSeq:NP_598332.1 UniGene:Hs.631757 PDB:2KZ3 PDBsum:2KZ3
ProteinModelPortal:O75771 SMR:O75771 DIP:DIP-24265N IntAct:O75771
MINT:MINT-127795 STRING:O75771 PhosphoSite:O75771 PRIDE:O75771
DNASU:5892 Ensembl:ENST00000335858 Ensembl:ENST00000345365
Ensembl:ENST00000357906 Ensembl:ENST00000360276
Ensembl:ENST00000394589 GeneID:5892 KEGG:hsa:5892 UCSC:uc002hir.2
UCSC:uc002his.2 GeneCards:GC17M033427 HGNC:HGNC:9823 MIM:602954
MIM:614291 neXtProt:NX_O75771 PharmGKB:PA34179 PhylomeDB:O75771
GenomeRNAi:5892 NextBio:22920 ArrayExpress:O75771 Bgee:O75771
Genevestigator:O75771 GermOnline:ENSG00000185379 Uniprot:O75771
Length = 328
Score = 159 (61.0 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 51/196 (26%), Positives = 97/196 (49%)
Query: 4 PMTPQNLLDNPLT-TEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSA 62
P+ +L + T T + G +D+ L G+ +TE+V GSGKTQ CL ++A
Sbjct: 65 PVNGADLYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCL--CMAA 122
Query: 63 QLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIF-VQSVHSVD--QL 119
+ +HG L + LY+ + RL QL + ++ + + +Q VH+ D Q+
Sbjct: 123 NV--AHG-LQQNVLYVDSNGGLTASRLLQLLQA-KTQDEEEQAEALRRIQVVHAFDIFQM 178
Query: 120 LDIMPKIESFIKNS-SNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLK 178
LD++ ++ + + S ++++V+DS+ A+ ++ L +++ LK
Sbjct: 179 LDVLQELRGTVAQQVTGSSGTVKVVVVDSVTAVVSPLLGGQQ---REGLALMMQLARELK 235
Query: 179 AMAVGFGLAVLVTNQV 194
+A G+AV+VTN +
Sbjct: 236 TLARDLGMAVVVTNHI 251
Score = 44 (20.5 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 218 SGRPICPALGIAWANCVNSRLFLSRNE 244
SGR + PALG +W+ ++R+ L E
Sbjct: 257 SGR-LKPALGRSWSFVPSTRILLDTIE 282
>ZFIN|ZDB-GENE-040426-2490 [details] [associations]
symbol:rad51d "RAD51 homolog D (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
ZFIN:ZDB-GENE-040426-2490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 KO:K10871 CTD:5892
HOGENOM:HOG000049134 HOVERGEN:HBG057455 OrthoDB:EOG4K0QP3
EMBL:BC066407 IPI:IPI00512042 RefSeq:NP_996959.1 UniGene:Dr.19061
ProteinModelPortal:Q6NYZ3 STRING:Q6NYZ3 PRIDE:Q6NYZ3 GeneID:404608
KEGG:dre:404608 InParanoid:Q6NYZ3 NextBio:20817676
ArrayExpress:Q6NYZ3 Bgee:Q6NYZ3 Uniprot:Q6NYZ3
Length = 327
Score = 160 (61.4 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 54/195 (27%), Positives = 91/195 (46%)
Query: 4 PMTPQNLLDNPLT-TEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSA 62
P++ +L + L+ T + G P +D+ L G+ ITEL GSGKTQ C + ++
Sbjct: 65 PISGADLYEELLSSTAILSTGSPSLDKLLDSGLYTGEITELTGSPGSGKTQVCFSVAVNI 124
Query: 63 QLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHN--PCDYIFVQSVHSVDQLL 120
SH L + +Y+ T+ RL Q+ T P+ I V V V LL
Sbjct: 125 ----SHQ-LKQTVVYIDTKGGMCANRLLQMLQTKTPNEQEQMEALQKIKVFRVFDVFSLL 179
Query: 121 DIMPKIESF-IKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKA 179
+ + S ++ S ++ +++DS++A+ ++ L +++G LK
Sbjct: 180 ACLQNLRSTGLQKMSVGGGSVKALMVDSVSAVLSPILGGKQNEGMS---LLMQVAGELKM 236
Query: 180 MAVGFGLAVLVTNQV 194
+A F +AVLVTN V
Sbjct: 237 IAKDFNIAVLVTNHV 251
Score = 42 (19.8 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 226 LGIAWANCVNSRLFLSRNED 245
LG++W++ +R+ L R E+
Sbjct: 263 LGLSWSHVPRTRVLLQRVEN 282
>UNIPROTKB|Q2HJ51 [details] [associations]
symbol:RAD51D "DNA repair protein RAD51 homolog 4"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006281 GO:GO:0006310
GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
KO:K10871 EMBL:BC113309 IPI:IPI00716231 RefSeq:NP_001039769.1
UniGene:Bt.59591 ProteinModelPortal:Q2HJ51 STRING:Q2HJ51
Ensembl:ENSBTAT00000025404 GeneID:529507 KEGG:bta:529507 CTD:5892
HOGENOM:HOG000049134 HOVERGEN:HBG057455 InParanoid:Q2HJ51
OMA:QARTQDE OrthoDB:EOG4K0QP3 NextBio:20875047 Uniprot:Q2HJ51
Length = 326
Score = 157 (60.3 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 49/182 (26%), Positives = 88/182 (48%)
Query: 16 TTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASS 75
+T + G +D+ L G+ +TE+V GSGKTQ CL ++A + +HG L +
Sbjct: 78 STAILSTGIGSLDKLLDAGLYTGEVTEIVGAPGSGKTQVCL--CVAAHV--AHG-LQQNV 132
Query: 76 LYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVD--QLLDIMPKIESFIKNS 133
LY+ + R+ QL P + +Q V + D Q+LD++ + +
Sbjct: 133 LYIDSNGGLTASRILQLLQARTPDEEEQAGALQRIQVVRAFDIFQMLDVLQDLRGAVSQQ 192
Query: 134 -SNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTN 192
S+S ++++V+DS+AA+ ++ L +++ LK +A +AVLVTN
Sbjct: 193 VSSSSGTLKVVVVDSVAAVVAPLLGGQQ---REGLALMMQLARELKTLARDLSVAVLVTN 249
Query: 193 QV 194
+
Sbjct: 250 HM 251
Score = 42 (19.8 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 218 SGRPICPALGIAWANCVNSRLFLSRNE 244
SG+ + PALG +W+ ++RL L +
Sbjct: 257 SGQ-LKPALGRSWSFVPSTRLLLDSTQ 282
>UNIPROTKB|E2REH7 [details] [associations]
symbol:XRCC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050769 "positive regulation of neurogenesis"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR020588
PROSITE:PS50162 GO:GO:0005524 GO:GO:0003677 GO:GO:0001701
GO:GO:0043524 GO:GO:0010332 GO:GO:0050769 GO:GO:0000724
GO:GO:0010165 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
KO:K10879 CTD:7516 OMA:DTDYHFD GeneTree:ENSGT00390000020445
EMBL:AAEX03010293 EMBL:AAEX03010294 RefSeq:XP_532771.3
ProteinModelPortal:E2REH7 Ensembl:ENSCAFT00000007971 GeneID:475548
KEGG:cfa:475548 NextBio:20851370 Uniprot:E2REH7
Length = 279
Score = 154 (59.3 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 53/220 (24%), Positives = 96/220 (43%)
Query: 40 ITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQ-LSHTFRP 98
I E G+GKT+ LT LP S GGL L++ T++ F M RL L H
Sbjct: 43 ILEFHGPEGTGKTEMLYHLTARCILPKSEGGLEVEVLFIDTDYHFDMLRLVTILEHRLSQ 102
Query: 99 SNDH--NPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSD 155
S++ C +F+ + +S QLL + +E+ + + + + L+++DS++A + D
Sbjct: 103 SSEEMVKHCLGRLFLVNCNSSTQLLLTLYSLETVVCSHPS----LCLLILDSLSAFYWID 158
Query: 156 FDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCL 215
N + + + K + L+ + + L + T Q + + + + G
Sbjct: 159 RVNGGESVNLQEATLKKCAQFLEKLVNEYRLVLFATTQSI-MQKTSNWTEGPSSA-FNHP 216
Query: 216 YSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVN 255
+ P L W V R+F S+ EDF + +V+
Sbjct: 217 KEADADYRPYLCKEWQQVVKHRIFFSKQEDFKTNQFSLVS 256
>UNIPROTKB|A7MB17 [details] [associations]
symbol:XRCC2 "XRCC2 protein" species:9913 "Bos taurus"
[GO:0050769 "positive regulation of neurogenesis" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR020588
PROSITE:PS50162 GO:GO:0005524 GO:GO:0003677 GO:GO:0001701
GO:GO:0043524 GO:GO:0010332 GO:GO:0050769 GO:GO:0000724
GO:GO:0010165 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
eggNOG:NOG279678 KO:K10879 CTD:7516 HOGENOM:HOG000004802
HOVERGEN:HBG079347 OMA:DTDYHFD OrthoDB:EOG4X6C91
GeneTree:ENSGT00390000020445 EMBL:DAAA02012055 EMBL:BC151285
IPI:IPI00867036 RefSeq:NP_001095824.1 UniGene:Bt.33372
STRING:A7MB17 Ensembl:ENSBTAT00000043719 GeneID:789410
KEGG:bta:789410 InParanoid:A7MB17 NextBio:20929670 Uniprot:A7MB17
Length = 280
Score = 154 (59.3 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 56/213 (26%), Positives = 91/213 (42%)
Query: 40 ITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQ-LSHTFRP 98
+ E G+GKT+ LT LP S GGL +++ T++ F M RL L H
Sbjct: 43 VLEFHGPEGTGKTEMLYHLTARCILPKSEGGLEVEVVFIDTDYHFDMLRLVTVLEHRLPQ 102
Query: 99 SNDH--NPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP-IRLIVIDSIAALFRS 154
S++ C +F+ S QLL + +E+ + R P + L+++DS++A +
Sbjct: 103 SSEEMVKHCLGRLFLVYCSSSTQLLLTLCSLETML-----CRHPSVCLLILDSLSAFYWI 157
Query: 155 DFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV--DLMEPNEGVNGLRVGNL 212
D N + + + K S +L+ + + L + T Q + P EG + R
Sbjct: 158 DRVNGGESVNLQESTLRKCSQLLEKLVNEYRLVLFATTQSIMQKASNPEEGPSCAR---- 213
Query: 213 GCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
CL P L AW V R+ S+ D
Sbjct: 214 NCLSDVDVDYRPYLCKAWQRVVKHRILFSKQND 246
>UNIPROTKB|H7C2Q5 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 EMBL:AC025521 EMBL:AC011195 HGNC:HGNC:9820
ProteinModelPortal:H7C2Q5 Ensembl:ENST00000425173 Bgee:H7C2Q5
Uniprot:H7C2Q5
Length = 213
Score = 146 (56.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 30/88 (34%), Positives = 46/88 (52%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T LL+ T C +D LGGG+P TE+ G GKTQ C+QL + Q+P
Sbjct: 18 TALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIP 77
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLS 93
GG++ ++++ TE F + R+ L+
Sbjct: 78 ECFGGVAGEAVFIDTEGSFMVDRVVDLA 105
>UNIPROTKB|E9PNT5 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9606 "Homo sapiens" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR003583 InterPro:IPR011941
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00278 GO:GO:0005524
GO:GO:0003684 GO:GO:0006281 EMBL:AC022405 GO:GO:0008094
EMBL:AC012476 InterPro:IPR013632 Pfam:PF08423
PANTHER:PTHR22942:SF12 HGNC:HGNC:9817 ChiTaRS:RAD51 IPI:IPI00980924
ProteinModelPortal:E9PNT5 SMR:E9PNT5 Ensembl:ENST00000527860
UCSC:uc001zmn.1 ArrayExpress:E9PNT5 Bgee:E9PNT5 Uniprot:E9PNT5
Length = 172
Score = 134 (52.2 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 29/69 (42%), Positives = 38/69 (55%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+ T
Sbjct: 103 TTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDT 162
Query: 81 EFPFPMRRL 89
E F RL
Sbjct: 163 EGTFRPERL 171
>UNIPROTKB|E1BVK2 [details] [associations]
symbol:RAD51D "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
GeneTree:ENSGT00550000074609 KO:K10871 CTD:5892 OMA:QARTQDE
EMBL:AADN02025945 IPI:IPI00597433 RefSeq:NP_001185575.1
UniGene:Gga.9680 ProteinModelPortal:E1BVK2
Ensembl:ENSGALT00000003463 GeneID:417528 KEGG:gga:417528
NextBio:20820813 Uniprot:E1BVK2
Length = 327
Score = 152 (58.6 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 53/212 (25%), Positives = 91/212 (42%)
Query: 23 GCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEF 82
G P +D+ L G+ +TEL GSGKTQ CL + S L GL +L +
Sbjct: 85 GNPSLDQLLDAGLYTGEVTELAGAPGSGKTQVCLSIAASVSL-----GLRQHVFFLDSTG 139
Query: 83 PFPMRRLHQLSHTFRPSNDHNPCDYIF-VQSVHSVD--QLLDIMPKIESFIKNSSNSRL- 138
F RL+Q+ R + + + VQ V D ++L + ++ + S
Sbjct: 140 GFTASRLYQMLQA-RVEDKEEQLEALQRVQVVRMFDIYEMLRALHEVRDCLSQQVESSAG 198
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
P++ ++IDS++A+ + + +++ LK +A F +AV+VTNQV
Sbjct: 199 PLKAVLIDSVSAVLSPLLGGRQSE---GLAIMMQLARELKTLAKEFSVAVVVTNQVT--R 253
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAW 230
+ + G +G S R + + W
Sbjct: 254 DSSTGALKSALGRSWSFVPSTRVLLQGRAVPW 285
>UNIPROTKB|E1BRQ1 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
GeneTree:ENSGT00550000074609 EMBL:AADN02025794 IPI:IPI00602048
ProteinModelPortal:E1BRQ1 Ensembl:ENSGALT00000008107 Uniprot:E1BRQ1
Length = 369
Score = 148 (57.2 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 54/213 (25%), Positives = 92/213 (43%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T LL+ T C +D LGGG+ ITE+ G GKTQ C+QL + Q+P
Sbjct: 77 TALELLEEEQTQGFIITFCSALDNILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQIP 136
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDHNPCDYIFVQSVHSVDQLL 120
GG++ ++++ TE F + R ++ H + H D++ S++ +L
Sbjct: 137 ECFGGVAGEAVFIDTEGSFMVDRAADIATACVRHCQLIAEAHQEEDHLQALETFSLESIL 196
Query: 121 DIMP--KIESFIKNSSNSRL-PIRLIVIDSIAA-LFRSD-----FDNTMDDLKKRSFLFF 171
+ + +I+ + L P L I L D F + +DL R+ L
Sbjct: 197 SHIYYFRCRDYIELLAQVYLLPDFLSEHSKIEVRLVVIDGIAFPFRHDFEDLSLRTRLLN 256
Query: 172 KISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGV 204
++ L +A AV++TNQ+ N+ +
Sbjct: 257 GLAQQLIIIANDHKSAVVLTNQMTTRFGQNQSM 289
Score = 39 (18.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 222 ICPALGIAWANCVNSRL 238
+ PALG +W + RL
Sbjct: 290 LVPALGESWGHAATVRL 306
>UNIPROTKB|F1NUE9 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007066 "female meiosis sister chromatid
cohesion" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0007131 GO:GO:0007141 GO:GO:0008821
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0007066 GeneTree:ENSGT00550000074609
OMA:QRDLVSF EMBL:AADN02025794 IPI:IPI00820436
Ensembl:ENSGALT00000039328 Uniprot:F1NUE9
Length = 373
Score = 148 (57.2 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 54/213 (25%), Positives = 92/213 (43%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T LL+ T C +D LGGG+ ITE+ G GKTQ C+QL + Q+P
Sbjct: 82 TALELLEEEQTQGFIITFCSALDNILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQIP 141
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDHNPCDYIFVQSVHSVDQLL 120
GG++ ++++ TE F + R ++ H + H D++ S++ +L
Sbjct: 142 ECFGGVAGEAVFIDTEGSFMVDRAADIATACVRHCQLIAEAHQEEDHLQALETFSLESIL 201
Query: 121 DIMP--KIESFIKNSSNSRL-PIRLIVIDSIAA-LFRSD-----FDNTMDDLKKRSFLFF 171
+ + +I+ + L P L I L D F + +DL R+ L
Sbjct: 202 SHIYYFRCRDYIELLAQVYLLPDFLSEHSKIEVRLVVIDGIAFPFRHDFEDLSLRTRLLN 261
Query: 172 KISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGV 204
++ L +A AV++TNQ+ N+ +
Sbjct: 262 GLAQQLIIIANDHKSAVVLTNQMTTRFGQNQSM 294
Score = 39 (18.8 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 222 ICPALGIAWANCVNSRL 238
+ PALG +W + RL
Sbjct: 295 LVPALGESWGHAATVRL 311
>UNIPROTKB|K7EN92 [details] [associations]
symbol:RAD51D "DNA repair protein RAD51 homolog 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 EMBL:AC022916
HGNC:HGNC:9823 Ensembl:ENST00000592577 Uniprot:K7EN92
Length = 249
Score = 145 (56.1 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 49/192 (25%), Positives = 94/192 (48%)
Query: 4 PMTPQNLLDNPLT-TEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSA 62
P+ +L + T T + G +D+ L G+ +TE+V GSGKTQ CL ++A
Sbjct: 67 PVNGADLYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCL--CMAA 124
Query: 63 QLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIF-VQSVHSVD--QL 119
+ +HG L + LY+ + RL QL + ++ + + +Q VH+ D Q+
Sbjct: 125 NV--AHG-LQQNVLYVDSNGGLTASRLLQLLQA-KTQDEEEQAEALRRIQVVHAFDIFQM 180
Query: 120 LDIMPKIESFIKNS-SNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLK 178
LD++ ++ + + S ++++V+DS+ A+ ++ L +++ LK
Sbjct: 181 LDVLQELRGTVAQQVTGSSGTVKVVVVDSVTAVVSPLLGGQQ---REGLALMMQLARELK 237
Query: 179 AMAVGFGLAVLV 190
+A G+AV+V
Sbjct: 238 TLARDLGMAVVV 249
>UNIPROTKB|H7C1R0 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 EMBL:AC025521 EMBL:AC011195 HGNC:HGNC:9820
ProteinModelPortal:H7C1R0 Ensembl:ENST00000413590 Uniprot:H7C1R0
Length = 257
Score = 140 (54.3 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 44/179 (24%), Positives = 85/179 (47%)
Query: 42 ELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTF 96
E+ G GKTQ C+QL + Q+P GG++ ++++ TE F + R+ L+ H
Sbjct: 2 EICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQ 61
Query: 97 RPSNDHNPCDYIFVQSVHSVDQLL---------DIMPKIES--FIKNSSNSRLPIRLIVI 145
+ H ++ ++D +L D + + + + +RL+++
Sbjct: 62 LIAEKHKGEEHRKALEDFTLDNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIV 121
Query: 146 DSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGV 204
D IA FR D +DDL R+ L ++ + ++A LAV++TNQ+ ++ N+ +
Sbjct: 122 DGIAFPFRHD----LDDLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQAL 176
Score = 39 (18.8 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 222 ICPALGIAWANCVNSRL 238
+ PALG +W + RL
Sbjct: 177 LVPALGESWGHAATIRL 193
>MGI|MGI:1261809 [details] [associations]
symbol:Rad51d "RAD51 homolog D" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
MGI:MGI:1261809 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 KO:K10871 CTD:5892 HOGENOM:HOG000049134
HOVERGEN:HBG057455 OMA:QARTQDE OrthoDB:EOG4K0QP3 EMBL:AB007040
EMBL:AF034955 EMBL:Y15570 EMBL:AK017835 EMBL:BC049136
IPI:IPI00116701 RefSeq:NP_035365.1 UniGene:Mm.9286
ProteinModelPortal:O55230 SMR:O55230 MINT:MINT-415416 STRING:O55230
PhosphoSite:O55230 PRIDE:O55230 Ensembl:ENSMUST00000018985
GeneID:19364 KEGG:mmu:19364 InParanoid:O55230 NextBio:296433
Bgee:O55230 CleanEx:MM_RAD51L3 Genevestigator:O55230
GermOnline:ENSMUSG00000018841 Uniprot:O55230
Length = 329
Score = 139 (54.0 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 49/195 (25%), Positives = 90/195 (46%)
Query: 4 PMTPQNLLDNPLT-TEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSA 62
P+ +L + T T + G +D+ L G+ +TE+V GSGKTQ CL ++A
Sbjct: 65 PLNGADLYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCL--CVAA 122
Query: 63 QLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVD--QLL 120
+ S L + LY+ + RL QL + +Q V S D ++L
Sbjct: 123 NVAHS---LQQNVLYVDSNGGMTASRLLQLLQARTQDEEKQASALQRIQVVRSFDIFRML 179
Query: 121 DIMPKIESFI-KNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKA 179
D++ + I + + S ++++++DS+ A+ ++ L +++ LK
Sbjct: 180 DMLQDLRGTIAQQEATSSGAVKVVIVDSVTAVVAPLLGGQQ---REGLALMMQLARELKI 236
Query: 180 MAVGFGLAVLVTNQV 194
+A G+AV+VTN +
Sbjct: 237 LARDLGVAVVVTNHL 251
Score = 46 (21.3 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 219 GRPICPALGIAWANCVNSRLFLSRNE 244
GR PALG +W+ ++R+ L E
Sbjct: 257 GRRFKPALGRSWSFVPSTRILLDVTE 282
>UNIPROTKB|F1SSP5 [details] [associations]
symbol:XRCC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050769 "positive regulation of neurogenesis"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR020588
PROSITE:PS50162 GO:GO:0005524 GO:GO:0003677 GO:GO:0001701
GO:GO:0043524 GO:GO:0010332 GO:GO:0050769 GO:GO:0000724
GO:GO:0010165 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
KO:K10879 OMA:DTDYHFD GeneTree:ENSGT00390000020445 EMBL:FP102134
EMBL:FP103034 RefSeq:XP_003134584.1 Ensembl:ENSSSCT00000017888
GeneID:100514260 KEGG:ssc:100514260 Uniprot:F1SSP5
Length = 280
Score = 141 (54.7 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 55/213 (25%), Positives = 92/213 (43%)
Query: 40 ITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQ-LSHTFRP 98
I E G+GKT+ LT LP + GGL L++ T++ F M RL L H
Sbjct: 43 ILEFHGPEGTGKTEMLYHLTARCILPKAEGGLEVEVLFIDTDYHFDMLRLVTVLEHRLSQ 102
Query: 99 SNDH--NPC-DYIFVQSVHSVDQLLDIMPKIES-FIKNSSNSRLPIRLIVIDSIAALFRS 154
S++ C +F+ S QLL + +E+ F + S + ++++DS++A +
Sbjct: 103 SSEEIMKYCLGRLFLVYCSSSTQLLLTLYSLETLFCSHPS-----VCVLIVDSLSAFYWI 157
Query: 155 DFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGC 214
D N + + + K S +L+ + + L + T Q +M+ N +
Sbjct: 158 DRVNGGESINLQESTLKKCSQLLEKLVSEYRLVLFATTQ--SIMQKTS--NAAEEPSCAF 213
Query: 215 LYSSGRPIC--PALGIAWANCVNSRLFLSRNED 245
I P L AW V R+F S++ED
Sbjct: 214 RRPGDGDIDYRPYLCRAWQQVVKHRVFFSKHED 246
>UNIPROTKB|I3LM31 [details] [associations]
symbol:XRCC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
GeneTree:ENSGT00390000020445 EMBL:FP102134 EMBL:FP103034
Ensembl:ENSSSCT00000026354 Uniprot:I3LM31
Length = 280
Score = 141 (54.7 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 55/213 (25%), Positives = 92/213 (43%)
Query: 40 ITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQ-LSHTFRP 98
I E G+GKT+ LT LP + GGL L++ T++ F M RL L H
Sbjct: 43 ILEFHGPEGTGKTEMLYHLTARCILPKAEGGLEVEVLFIDTDYHFDMLRLVTVLEHRLSQ 102
Query: 99 SNDH--NPC-DYIFVQSVHSVDQLLDIMPKIES-FIKNSSNSRLPIRLIVIDSIAALFRS 154
S++ C +F+ S QLL + +E+ F + S + ++++DS++A +
Sbjct: 103 SSEEIMKYCLGRLFLVYCSSSTQLLLTLYSLETLFCSHPS-----VCVLIVDSLSAFYWI 157
Query: 155 DFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGC 214
D N + + + K S +L+ + + L + T Q +M+ N +
Sbjct: 158 DRVNGGESINLQESTLKKCSQLLEKLVSEYRLVLFATTQ--SIMQKTS--NAAEEPSCAF 213
Query: 215 LYSSGRPIC--PALGIAWANCVNSRLFLSRNED 245
I P L AW V R+F S++ED
Sbjct: 214 RRPGDGDIDYRPYLCRAWQQVVKHRVFFSKHED 246
>UNIPROTKB|E2RP02 [details] [associations]
symbol:RAD51D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
KO:K10871 CTD:5892 OMA:QARTQDE EMBL:AAEX03006625 RefSeq:XP_548263.2
Ensembl:ENSCAFT00000029092 GeneID:491143 KEGG:cfa:491143
NextBio:20864025 Uniprot:E2RP02
Length = 328
Score = 138 (53.6 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 43/182 (23%), Positives = 83/182 (45%)
Query: 16 TTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASS 75
+T + G +D+ L G+ +TE+V GSGKTQ CL + + GL +
Sbjct: 78 STAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCVAANVAY-----GLQQNV 132
Query: 76 LYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVD--QLLDIMPKIESFIKNS 133
+Y+ + R+ QL P + +Q V + D Q+LD++ +
Sbjct: 133 VYIDSNGGLTASRILQLLQARTPDEEVQAGALQRIQVVRAFDIFQMLDVLQDCRGTLSQQ 192
Query: 134 -SNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTN 192
S++ ++++++DS+ A+ ++ L +++ LK +A G+AV+VTN
Sbjct: 193 VSSASGTVKVVIVDSVTAVVSPLLGGQQ---REGLALMMQLARELKTLARDLGMAVVVTN 249
Query: 193 QV 194
+
Sbjct: 250 HM 251
Score = 41 (19.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 224 PALGIAWANCVNSRLFLSRNE 244
PALG +W+ ++R+ L +E
Sbjct: 262 PALGRSWSFVPSTRILLDIDE 282
>UNIPROTKB|O43543 [details] [associations]
symbol:XRCC2 "DNA repair protein XRCC2" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0010165 "response to
X-ray" evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0050769 "positive regulation of
neurogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007126 "meiosis" evidence=TAS] [GO:0006281 "DNA repair"
evidence=IGI] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0005634 GO:GO:0007126 GO:GO:0003677 GO:GO:0006281
GO:GO:0001701 GO:GO:0043524 EMBL:CH471173 GO:GO:0010332
GO:GO:0050769 GO:GO:0000724 GO:GO:0010165 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 eggNOG:NOG279678 KO:K10879
EMBL:AF035587 EMBL:AC003109 EMBL:Y08837 EMBL:Y17033 EMBL:AF520762
EMBL:AK313607 EMBL:BC042137 IPI:IPI00306229 RefSeq:NP_005422.1
UniGene:Hs.647093 ProteinModelPortal:O43543 SMR:O43543
DIP:DIP-24242N IntAct:O43543 MINT:MINT-137755 STRING:O43543
PhosphoSite:O43543 PRIDE:O43543 DNASU:7516 Ensembl:ENST00000359321
GeneID:7516 KEGG:hsa:7516 UCSC:uc003wld.3 CTD:7516
GeneCards:GC07M152341 HGNC:HGNC:12829 MIM:600375 neXtProt:NX_O43543
Orphanet:227535 PharmGKB:PA37421 HOGENOM:HOG000004802
HOVERGEN:HBG079347 InParanoid:O43543 OMA:DTDYHFD OrthoDB:EOG4X6C91
PhylomeDB:O43543 ChiTaRS:XRCC2 GenomeRNAi:7516 NextBio:29411
Bgee:O43543 CleanEx:HS_XRCC2 Genevestigator:O43543
GermOnline:ENSG00000196584 Uniprot:O43543
Length = 280
Score = 140 (54.3 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 55/213 (25%), Positives = 88/213 (41%)
Query: 40 ITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQ-LSHTFRP 98
I E G+GKT+ LT LP S GGL L++ T++ F M RL L H
Sbjct: 43 ILEFHGPEGTGKTEMLYHLTARCILPKSEGGLEVEVLFIDTDYHFDMLRLVTILEHRLSQ 102
Query: 99 SNDH--NPC-DYIFVQSVHSVDQLLDIMPKIES-FIKNSSNSRLPIRLIVIDSIAALFRS 154
S++ C F+ S LL + +ES F + S + L+++DS++A +
Sbjct: 103 SSEEIIKYCLGRFFLVYCSSSTHLLLTLYSLESMFCSHPS-----LCLLILDSLSAFYWI 157
Query: 155 DFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGC 214
D N + + + K S L+ + + L + T Q + + C
Sbjct: 158 DRVNGGESVNLQESTLRKCSQCLEKLVNDYRLVLFATTQTIMQKASSSSEEPSHASRRLC 217
Query: 215 -LYSSGRP-ICPALGIAWANCVNSRLFLSRNED 245
+ RP +C A W V R+F S+ +D
Sbjct: 218 DVDIDYRPYLCKA----WQQLVKHRMFFSKQDD 246
>MGI|MGI:1927345 [details] [associations]
symbol:Xrcc2 "X-ray repair complementing defective repair in
Chinese hamster cells 2" species:10090 "Mus musculus" [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IMP] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0006281 "DNA
repair" evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IMP] [GO:0010332 "response
to gamma radiation" evidence=IMP] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IGI] [GO:0050769 "positive
regulation of neurogenesis" evidence=IMP] InterPro:IPR020588
PROSITE:PS50162 MGI:MGI:1927345 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0001701 GO:GO:0043524 GO:GO:0010332
GO:GO:0050769 GO:GO:0000724 GO:GO:0010165 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 Pfam:PF08423 KO:K10879 CTD:7516
HOGENOM:HOG000004802 HOVERGEN:HBG079347 OMA:DTDYHFD
OrthoDB:EOG4X6C91 EMBL:Y17040 EMBL:AK020192 EMBL:AK014963
EMBL:BC033417 IPI:IPI00317967 RefSeq:NP_065595.2 UniGene:Mm.143767
ProteinModelPortal:Q9CX47 SMR:Q9CX47 STRING:Q9CX47 PRIDE:Q9CX47
Ensembl:ENSMUST00000030773 GeneID:57434 KEGG:mmu:57434
UCSC:uc008wta.1 GeneTree:ENSGT00390000020445 InParanoid:Q9CX47
NextBio:313806 Bgee:Q9CX47 Genevestigator:Q9CX47
GermOnline:ENSMUSG00000028933 Uniprot:Q9CX47
Length = 278
Score = 139 (54.0 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 53/212 (25%), Positives = 95/212 (44%)
Query: 40 ITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQ-LSHTFRP 98
I E G+GKT+ LT LP S GGL L++ T++ F M RL L H
Sbjct: 43 IFEFHGPEGTGKTEMLYHLTARCILPKSEGGLQIEVLFIDTDYHFDMLRLVTVLEHRLSQ 102
Query: 99 SNDH--NPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSD 155
S++ C +F+ S QLL + +E+ + SR + L+++DS+++ + D
Sbjct: 103 SSEEAMKLCLARLFLAYCSSSMQLLLTLHSLEALLC----SRPSLCLLIVDSLSSFYWID 158
Query: 156 FDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCL 215
+ + + + K S +L+ + + L + T Q + + + ++ +G C
Sbjct: 159 RVSGGESVALQESTLQKCSQLLERLVTEYRLLLFATTQSL-MQKGSDSADGPSSSKHPCD 217
Query: 216 YSSG-RP-ICPALGIAWANCVNSRLFLSRNED 245
G R +C A W V R+ SR+++
Sbjct: 218 GDMGYRAYLCKA----WQRVVKHRVIFSRDDE 245
>UNIPROTKB|E1BX16 [details] [associations]
symbol:XRCC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0010165 "response to
X-ray" evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0050769 "positive regulation of
neurogenesis" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005524 GO:GO:0003677 GO:GO:0043524 GO:GO:0010332
GO:GO:0000724 GO:GO:0010165 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 KO:K10879 CTD:7516 OMA:DTDYHFD
GeneTree:ENSGT00390000020445 EMBL:AADN02000315 EMBL:AADN02000316
IPI:IPI00575623 RefSeq:XP_418543.3 UniGene:Gga.12290
Ensembl:ENSGALT00000010141 GeneID:420438 KEGG:gga:420438
Uniprot:E1BX16
Length = 278
Score = 138 (53.6 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 55/218 (25%), Positives = 96/218 (44%)
Query: 34 GIPCNS-ITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQ- 91
G P + + E G+GKT+ L +P S GGL +++ T++ F M RL
Sbjct: 36 GSPVHGDVIEFHGPEGTGKTEMLYHLIARCIIPKSGGGLEVEVMFIDTDYHFDMLRLVTI 95
Query: 92 LSHTFRPSNDH--NPC-DYIFVQSVHSVDQLLDIMPKIES-FIKNSSNSRLPIRLIVIDS 147
L H S + C +F+ + +S QLL + +E+ F + S + L+++DS
Sbjct: 96 LEHRLEQSTEEMMKRCLGRLFLVNCNSSTQLLLTLYSLENMFCTHPS-----LCLLILDS 150
Query: 148 IAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPN--EGVN 205
I+A + D N + L + K + L+ + L + T Q + N EG
Sbjct: 151 ISAFYWIDRSNGGESLNSQEMNLKKCANFLEKLVREHHLVLFATTQSIMQKSTNSAEGFF 210
Query: 206 GLRVGNLGCLYSSGRP-ICPALGIAWANCVNSRLFLSR 242
L++ + + + RP +C + W V R+F S+
Sbjct: 211 PLKLQSE--IDADYRPYLCKS----WQQMVTHRIFFSK 242
>UNIPROTKB|Q0U9F0 [details] [associations]
symbol:SNOG_11614 "Putative uncharacterized protein"
species:321614 "Phaeosphaeria nodorum SN15" [GO:0000150
"recombinase activity" evidence=ISS] [GO:0003690 "double-stranded
DNA binding" evidence=ISS] [GO:0003697 "single-stranded DNA
binding" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR010995
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 GO:GO:0005524 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0008094 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 OrthoDB:EOG43XZC8 GO:GO:0000709
EMBL:CH445343 RefSeq:XP_001801853.1 ProteinModelPortal:Q0U9F0
EnsemblFungi:SNOT_11614 GeneID:5978761 KEGG:pno:SNOG_11614
Uniprot:Q0U9F0
Length = 353
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 41/132 (31%), Positives = 66/132 (50%)
Query: 64 LPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIM 123
LP GG Y+ TE F R+ Q++ F + + + ++V+S Q+ +++
Sbjct: 162 LPKDMGGAEGKVAYIDTEGTFRPERIAQIAERFGVDPETTQDNITYARAVNSEHQM-ELL 220
Query: 124 PKI-ESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAV 182
K+ E F+ N RL++IDSI ALFR D+ +L +R + L +A
Sbjct: 221 NKVAEFFVGNE------YRLLIIDSIMALFRVDYTGR-GELNERQQKLNQFLSKLTHVAE 273
Query: 183 GFGLAVLVTNQV 194
F +AVL+TNQV
Sbjct: 274 EFNVAVLLTNQV 285
>RGD|1564823 [details] [associations]
symbol:Xrcc2 "X-ray repair complementing defective repair in
Chinese hamster cells 2" species:10116 "Rattus norvegicus"
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0010165 "response to X-ray"
evidence=IEA;ISO] [GO:0010332 "response to gamma radiation"
evidence=IEA;ISO] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA;ISO] [GO:0050769 "positive
regulation of neurogenesis" evidence=IEA;ISO] InterPro:IPR020588
PROSITE:PS50162 RGD:1564823 GO:GO:0005524 GO:GO:0003677
GO:GO:0001701 GO:GO:0043524 GO:GO:0010332 GO:GO:0050769
GO:GO:0000724 GO:GO:0010165 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 KO:K10879 CTD:7516 OMA:DTDYHFD OrthoDB:EOG4X6C91
GeneTree:ENSGT00390000020445 EMBL:CH474057 IPI:IPI00191530
RefSeq:NP_001102685.1 UniGene:Rn.8224 Ensembl:ENSRNOT00000010025
GeneID:499966 KEGG:rno:499966 NextBio:704588 Uniprot:D3ZPC8
Length = 278
Score = 132 (51.5 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 50/210 (23%), Positives = 90/210 (42%)
Query: 40 ITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQ-LSHTFRP 98
I E G+GKT+ LT LP S GGL L++ T++ F M RL L H
Sbjct: 43 ILEFHGPEGTGKTEMLYHLTARCILPKSEGGLQIEVLFIDTDYHFDMLRLVTVLEHRLSQ 102
Query: 99 SNDH--NPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSD 155
S++ C +F+ S QLL + +E+ + + + + L+++DS+++ + D
Sbjct: 103 SSEEAIKLCLGRLFLAYCSSSMQLLLTLYSLEALLCSHPS----LCLLIVDSMSSFYWID 158
Query: 156 FDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCL 215
+ + + + K S +L+ + + L + T Q + L + ++ G C
Sbjct: 159 RVSGGESVSLQESTLQKCSQLLERLVTEYRLLLFATTQSL-LQKGSDSAEGPSSSKHPC- 216
Query: 216 YSSGRPICPALGIAWANCVNSRLFLSRNED 245
L AW V R+ SR ++
Sbjct: 217 -DGDMDYRAYLCKAWQRVVKHRVVFSREDE 245
>RGD|1306944 [details] [associations]
symbol:Rad51d "RAD51 homolog D (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1306944
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 EMBL:CH473948
GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423 UniGene:Rn.206266
IPI:IPI00782474 Ensembl:ENSRNOT00000055971 Uniprot:D4A2C5
Length = 233
Score = 126 (49.4 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 40/152 (26%), Positives = 73/152 (48%)
Query: 4 PMTPQNLLDNPLT-TEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSA 62
P+ +L + T T + G +D+ L G+ +TE+V GSGKTQ CL ++A
Sbjct: 65 PLNGADLYEELKTSTAILSTGIGSLDKLLDAGLYTGELTEIVGGPGSGKTQVCL--CVAA 122
Query: 63 QLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVD--QLL 120
+ S L + LY+ + RL QL + +Q VHS D Q+L
Sbjct: 123 NVAHS---LQQNVLYVDSNGGMTASRLLQLLQARTQDEEKQASALQRIQVVHSFDIFQML 179
Query: 121 DIMPKIE-SFIKNSSNSRLPIRLIVIDSIAAL 151
D++ + + + ++ S ++++++DS+ A+
Sbjct: 180 DMLQDLRGTMAQQATASSGTVKVVIVDSVTAV 211
>UNIPROTKB|I3LTG9 [details] [associations]
symbol:RAD51D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 OMA:QARTQDE
EMBL:FP565655 Ensembl:ENSSSCT00000023297 Uniprot:I3LTG9
Length = 322
Score = 119 (46.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 38/139 (27%), Positives = 66/139 (47%)
Query: 16 TTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASS 75
+T + G +D+ L G+ +TE+V GSGKTQ CL ++A + S L
Sbjct: 78 STAILSTGIRSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCL--CVAANVAHS---LQQKV 132
Query: 76 LYLHTEFPFPMRRLHQLSHTFRPSNDHNPC---DYIFVQSVHSVDQLLDIMPKIESFIKN 132
LY+ + R+ QL R S++ I V V + Q+LD++ + +
Sbjct: 133 LYIDSNGGLTASRILQLLQA-RTSDEEEQAGALQRIQVVRVFDIFQMLDVLQDLRGAVAQ 191
Query: 133 S-SNSRLPIRLIVIDSIAA 150
S+S ++++V+DS+ A
Sbjct: 192 QVSSSAGTVKVVVVDSVTA 210
Score = 46 (21.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 224 PALGIAWANCVNSRLFLSRNED 245
PALG +W+ ++RL L ++D
Sbjct: 258 PALGRSWSFVPSTRLLLDISQD 279
>UNIPROTKB|J3QR58 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007066 "female meiosis sister
chromatid cohesion" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 EMBL:AC025521 EMBL:AC011195 HGNC:HGNC:9820
Ensembl:ENST00000461271 Uniprot:J3QR58
Length = 135
Score = 107 (42.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 37/135 (27%), Positives = 62/135 (45%)
Query: 41 TELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRL---------H- 90
TE+ G GKTQ C+QL + Q+P GG++ ++++ TE F + R+ H
Sbjct: 4 TEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHL 63
Query: 91 QLSHTFRPSNDH----------NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
QL +H N +I+ +LL + + F+ S +S+ +
Sbjct: 64 QLIAEKHKGEEHRKALEDFTLDNILSHIYYFRCRDYTELLAQVYLLPDFL--SEHSK--V 119
Query: 141 RLIVIDSIAALFRSD 155
RL+++D IA FR D
Sbjct: 120 RLVIVDGIAFPFRHD 134
>UNIPROTKB|E2R3A3 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR010995 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 SUPFAM:SSF47794 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 GeneTree:ENSGT00550000075091
EMBL:AAEX03007314 Ensembl:ENSCAFT00000035193 Uniprot:E2R3A3
Length = 285
Score = 84 (34.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 163 KLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQM 215
Score = 71 (30.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQ 53
T G D+ LGGGI +ITE E +GKTQ
Sbjct: 102 TTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQ 134
>UNIPROTKB|B4DMW6 [details] [associations]
symbol:DMC1 "Meiotic recombination protein DMC1/LIM15
homolog" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR010995
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426
InterPro:IPR013632 Pfam:PF08423 EMBL:AL022320 UniGene:Hs.339396
HGNC:HGNC:2927 HOVERGEN:HBG001504 IPI:IPI00880171 EMBL:AK297664
ProteinModelPortal:B4DMW6 SMR:B4DMW6 STRING:B4DMW6
Ensembl:ENST00000428462 UCSC:uc011anv.1 ArrayExpress:B4DMW6
Bgee:B4DMW6 Uniprot:B4DMW6
Length = 285
Score = 84 (34.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 163 KLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQM 215
Score = 71 (30.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQ 53
T G D+ LGGGI +ITE E +GKTQ
Sbjct: 102 TTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQ 134
>UNIPROTKB|G3V3H9 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9606 "Homo
sapiens" [GO:0010033 "response to organic substance" evidence=IEA]
EMBL:AL049840 HGNC:HGNC:12830 ProteinModelPortal:G3V3H9 SMR:G3V3H9
Ensembl:ENST00000556980 ArrayExpress:G3V3H9 Bgee:G3V3H9
Uniprot:G3V3H9
Length = 112
Score = 91 (37.1 bits), Expect = 0.00090, P = 0.00090
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSG 50
P ++ ++GCP++D L GG+P + ITEL S +G
Sbjct: 76 PTQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAG 112
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.138 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 302 302 0.00097 115 3 11 22 0.49 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 122
No. of states in DFA: 610 (65 KB)
Total size of DFA: 209 KB (2116 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.55u 0.10s 25.65t Elapsed: 00:00:03
Total cpu time: 25.57u 0.10s 25.67t Elapsed: 00:00:03
Start: Sat May 11 08:06:47 2013 End: Sat May 11 08:06:50 2013
WARNINGS ISSUED: 1