BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022155
(302 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225446054|ref|XP_002268968.1| PREDICTED: DNA repair protein XRCC3 homolog [Vitis vinifera]
Length = 300
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/306 (65%), Positives = 239/306 (78%), Gaps = 14/306 (4%)
Query: 5 MTPQNLLDNPL--TTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSA 62
M PQNLL NPL TT+KCT+GCPI+DRCL GG+PCNSITELVAESGSGKTQ CLQL LSA
Sbjct: 1 MIPQNLLQNPLALTTQKCTLGCPILDRCLAGGVPCNSITELVAESGSGKTQLCLQLVLSA 60
Query: 63 QLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDH------NPCDYIFVQSVHSV 116
QLP+S GGL+ASSLY+H+EFPFP RRL QLS +FR S H NP D++ V+ V S
Sbjct: 61 QLPTSLGGLAASSLYIHSEFPFPSRRLQQLSQSFRSSYSHVLDSEYNPLDFVLVRGVQSA 120
Query: 117 DQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGM 176
DQL D++ K++S + ++LP+RLIVIDSIAALFR +F+NT DLK+RS LFFKISG
Sbjct: 121 DQLFDVLLKMDSVLLRPP-TQLPVRLIVIDSIAALFRGEFENTPFDLKRRSSLFFKISGK 179
Query: 177 LKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNS 236
LKA+A FGLAV+VTNQVVD + G+NGLRVGNLG L+SSGR +C ALG++WANCVNS
Sbjct: 180 LKALAERFGLAVVVTNQVVDFVGQAGGLNGLRVGNLGSLWSSGRRVCAALGLSWANCVNS 239
Query: 237 RLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREG 296
RLFLSRNE+ V G+GG G+ D V R TRR LHV+FAPHL ++SCEF I+REG
Sbjct: 240 RLFLSRNEEIVGEVT-----GLGGVGAGDTVSRLTRRHLHVIFAPHLPESSCEFVISREG 294
Query: 297 VFGVER 302
V GVER
Sbjct: 295 VLGVER 300
>gi|147777505|emb|CAN60498.1| hypothetical protein VITISV_027869 [Vitis vinifera]
Length = 2077
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/306 (65%), Positives = 239/306 (78%), Gaps = 14/306 (4%)
Query: 5 MTPQNLLDNPL--TTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSA 62
M PQNLL NPL TT+KCT+GCPI+DRCL GG+PCNSITELVAESGSGKTQ CLQL LSA
Sbjct: 1778 MIPQNLLQNPLALTTQKCTLGCPILDRCLAGGVPCNSITELVAESGSGKTQLCLQLVLSA 1837
Query: 63 QLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDH------NPCDYIFVQSVHSV 116
QLP+S GGL+ASSLY+H+EFPFP RRL QLS +FR S H NP D++ V+ V S
Sbjct: 1838 QLPTSLGGLAASSLYIHSEFPFPSRRLQQLSQSFRSSYSHVLDSEYNPLDFVLVRGVQSA 1897
Query: 117 DQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGM 176
DQL D++ K++S + ++LP+RLIVIDSIAALFR +F+NT DLK+RS LFFKISG
Sbjct: 1898 DQLFDVLLKMDSVLLRPP-TQLPVRLIVIDSIAALFRGEFENTPFDLKRRSSLFFKISGK 1956
Query: 177 LKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNS 236
LKA+A FGLAV+VTNQVVD + G+NGLRVGNLG L+SSGR +C ALG++WANCVNS
Sbjct: 1957 LKALAERFGLAVVVTNQVVDFVGQAGGLNGLRVGNLGSLWSSGRRVCAALGLSWANCVNS 2016
Query: 237 RLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREG 296
RLFLSRNE+ V G+GG G+ D V R TRR LHV+FAPHL ++SCEF I+REG
Sbjct: 2017 RLFLSRNEEIVXEVT-----GLGGVGAGDTVSRLTRRHLHVIFAPHLPESSCEFVISREG 2071
Query: 297 VFGVER 302
V GVER
Sbjct: 2072 VLGVER 2077
>gi|255581709|ref|XP_002531657.1| X-ray repair cross complementing protein 3, xrcc3, putative
[Ricinus communis]
gi|223528715|gb|EEF30727.1| X-ray repair cross complementing protein 3, xrcc3, putative
[Ricinus communis]
Length = 301
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/312 (63%), Positives = 235/312 (75%), Gaps = 27/312 (8%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
M P+NL+ P+ T+KCT+GCPI+DRCL GGIPCNSITE+VAESG+GKTQ CLQL+L AQL
Sbjct: 1 MKPENLVFQPIPTQKCTLGCPILDRCLNGGIPCNSITEIVAESGTGKTQLCLQLSLYAQL 60
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDH---------------NPCDYIF 109
P S GGLSASSLYLHTEFPFP RRLHQLSH+F+ + NPCD IF
Sbjct: 61 PLSLGGLSASSLYLHTEFPFPFRRLHQLSHSFQSQHPQIFINNNNNDTINNYDNPCDNIF 120
Query: 110 VQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFL 169
V SV S D L DIMPKIESF+ S + LP+RLIVIDS+AALFRS+F+NT DLK+RS L
Sbjct: 121 VHSVRSADYLFDIMPKIESFLVYS-KTHLPVRLIVIDSVAALFRSEFENTATDLKRRSAL 179
Query: 170 FFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIA 229
FFKIS L+A+A F LAV+V+NQVVD + +G+NG R+G+LG LYSSGR +CPALG+A
Sbjct: 180 FFKISAKLRALAWRFNLAVVVSNQVVDFVGSGDGLNGARIGDLGSLYSSGRRVCPALGLA 239
Query: 230 WANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCE 289
WANCVNSRLFLSR+ EN MV+G GS C +TRR LHVVFAPHL +SCE
Sbjct: 240 WANCVNSRLFLSRD------ENGMVDGAESGS-----FCSQTRRRLHVVFAPHLPYSSCE 288
Query: 290 FEITREGVFGVE 301
F I REGVFG++
Sbjct: 289 FVIRREGVFGID 300
>gi|449466133|ref|XP_004150781.1| PREDICTED: DNA repair protein XRCC3 homolog [Cucumis sativus]
gi|449506730|ref|XP_004162832.1| PREDICTED: DNA repair protein XRCC3 homolog [Cucumis sativus]
Length = 294
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/299 (66%), Positives = 231/299 (77%), Gaps = 9/299 (3%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MTP+NLL TT+KCT GCPIIDR +GGG+ C+S+TE+VAESG GKTQ CLQL+L AQL
Sbjct: 1 MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQL 60
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDH--NPCDYIFVQSVHSVDQLLDI 122
P S+GGL+ASSLY+HTEFPFP RRL QLS F S NP D+IFV+ VHS QL DI
Sbjct: 61 PLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDI 120
Query: 123 MPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAV 182
MPKIES ++N NS+LPIRLIVIDSIAALFRSDF+NT DLK+RS LFFKISG LK +A
Sbjct: 121 MPKIESSLENR-NSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAK 179
Query: 183 GFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ LAV++TNQVVDLM ++G+N LR+GNL L SS R +CPALG+AWANCVNSRLFLSR
Sbjct: 180 KYSLAVVLTNQVVDLMGSSDGLNALRIGNLKFLCSSERRVCPALGLAWANCVNSRLFLSR 239
Query: 243 NEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
NE+ V M+N GSE RRTRR LHVVFAPHL +SCE+ I REGV GVE
Sbjct: 240 NEEVVGEGEGMMN------GSELVQRRRTRRWLHVVFAPHLPKSSCEYVINREGVVGVE 292
>gi|224142257|ref|XP_002324475.1| predicted protein [Populus trichocarpa]
gi|222865909|gb|EEF03040.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/304 (62%), Positives = 232/304 (76%), Gaps = 20/304 (6%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MTPQ LL EKC++GCPI+D C+GGGIPCNSITE+VAESGSGKTQ CLQL+L AQL
Sbjct: 1 MTPQKLL----PVEKCSLGCPILDCCMGGGIPCNSITEIVAESGSGKTQLCLQLSLRAQL 56
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPS------NDHNPCDYIFVQSVHSVDQ 118
P GGLSASSLYL+TEFPFP RRLHQLS + ++++PCD IF+QSV++ DQ
Sbjct: 57 PPFLGGLSASSLYLYTEFPFPTRRLHQLSSALQCQYPQIFVSNYDPCDSIFLQSVNTADQ 116
Query: 119 LLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLK 178
LLDIMP++ESF++NS +RLP+R+IVIDS+AALFR++F+NT DL +RS LFFKISG LK
Sbjct: 117 LLDIMPQVESFLENS-KTRLPVRVIVIDSMAALFRAEFENTASDLIRRSSLFFKISGKLK 175
Query: 179 AMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRL 238
A F L VLVTNQV+D+++ EG+N +R+GNL +YSSGR +CPALG++WANCVNSRL
Sbjct: 176 EFAKRFNLVVLVTNQVMDVVDSGEGLNEVRIGNLSGMYSSGRRVCPALGLSWANCVNSRL 235
Query: 239 FLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
FLS++E G+ G G F+ R TRR LHVVFAPHL D SCEF I REGV
Sbjct: 236 FLSKDE---------YESGLVGGGESGFLSRETRRRLHVVFAPHLPDLSCEFVIRREGVV 286
Query: 299 GVER 302
GV R
Sbjct: 287 GVNR 290
>gi|297735394|emb|CBI17834.3| unnamed protein product [Vitis vinifera]
Length = 260
Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 189/300 (63%), Positives = 217/300 (72%), Gaps = 42/300 (14%)
Query: 5 MTPQNLLDNPL--TTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSA 62
M PQNLL NPL TT+KCT+GCPI+DRCL GG+PCNSITELVAESGSGKTQ CLQL LSA
Sbjct: 1 MIPQNLLQNPLALTTQKCTLGCPILDRCLAGGVPCNSITELVAESGSGKTQLCLQLVLSA 60
Query: 63 QLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDI 122
QLP+S GGL+ASSLY+H+EFPFP RRL QLS +FR S H
Sbjct: 61 QLPTSLGGLAASSLYIHSEFPFPSRRLQQLSQSFRSSYSH-------------------- 100
Query: 123 MPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAV 182
LP+RLIVIDSIAALFR +F+NT DLK+RS LFFKISG LKA+A
Sbjct: 101 ---------------LPVRLIVIDSIAALFRGEFENTPFDLKRRSSLFFKISGKLKALAE 145
Query: 183 GFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
FGLAV+VTNQVVD + G+NGLRVGNLG L+SSGR +C ALG++WANCVNSRLFLSR
Sbjct: 146 RFGLAVVVTNQVVDFVGQAGGLNGLRVGNLGSLWSSGRRVCAALGLSWANCVNSRLFLSR 205
Query: 243 NEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVER 302
NE+ V G+GG G+ D V R TRR LHV+FAPHL ++SCEF I+REGV GVER
Sbjct: 206 NEEIVGEVT-----GLGGVGAGDTVSRLTRRHLHVIFAPHLPESSCEFVISREGVLGVER 260
>gi|15242137|ref|NP_200554.1| DNA repair protein XRCC3-like protein [Arabidopsis thaliana]
gi|30696870|ref|NP_851202.1| DNA repair protein XRCC3-like protein [Arabidopsis thaliana]
gi|55583983|sp|Q9FKM5.1|XRCC3_ARATH RecName: Full=DNA repair protein XRCC3 homolog; AltName: Full=X-ray
repair cross-complementing protein 3 homolog;
Short=AtXRCC3
gi|9758307|dbj|BAB08781.1| unnamed protein product [Arabidopsis thaliana]
gi|15425729|dbj|BAB64342.1| AtXRCC3alpha [Arabidopsis thaliana]
gi|16444953|dbj|BAB70684.1| AtXRCC3beta [Arabidopsis thaliana]
gi|19571703|emb|CAD27641.1| Rad51B protein [Arabidopsis thaliana]
gi|19571705|emb|CAD27642.1| Rad51B protein [Arabidopsis thaliana]
gi|20384750|gb|AAK54457.1| DNA repair protein XRCC3 [Arabidopsis thaliana]
gi|109946499|gb|ABG48428.1| At5g57450 [Arabidopsis thaliana]
gi|332009520|gb|AED96903.1| DNA repair protein XRCC3-like protein [Arabidopsis thaliana]
gi|332009521|gb|AED96904.1| DNA repair protein XRCC3-like protein [Arabidopsis thaliana]
Length = 304
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 177/304 (58%), Positives = 226/304 (74%), Gaps = 13/304 (4%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+ P+NLL T K T GC I+D CL GGI C+S+TE+VAESG GKTQ CLQL+L QL
Sbjct: 6 IKPENLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQL 65
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSN-------DHNPCDYIFVQSVHSVD 117
P SHGGL+ SSLYLH+EFPFP RRLHQLSHTF SN + NPCD++FVQ+VHSVD
Sbjct: 66 PISHGGLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVD 125
Query: 118 QLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGML 177
L DIMP+I+ F+ NS +R P++LIV+DS+AALFRS+FDNT DLKKRS LFFKISG L
Sbjct: 126 HLFDIMPRIDGFVGNS-KTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKL 184
Query: 178 KAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSR 237
K +A F LA+++TNQV DL+E ++G++GLR+GNL LYSSGR + P+LG+AWANCVNSR
Sbjct: 185 KQLASKFDLAIVITNQVTDLVETSDGLSGLRIGNLRYLYSSGRRVVPSLGLAWANCVNSR 244
Query: 238 LFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
F+SR++ +V++ + S V R +R L +VF+P+L +SCEF ITREG+
Sbjct: 245 FFISRSDGSIVKDRSEKDENCSSS-----VSRSAKRRLDIVFSPYLPGSSCEFMITREGI 299
Query: 298 FGVE 301
V+
Sbjct: 300 CAVQ 303
>gi|356567224|ref|XP_003551821.1| PREDICTED: DNA repair protein XRCC3 homolog [Glycine max]
Length = 288
Score = 323 bits (828), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 170/302 (56%), Positives = 214/302 (70%), Gaps = 30/302 (9%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
M +NLL T+KCT+GCP++DRCL GG+PC S+TE V ESG GKTQ CLQL LSAQL
Sbjct: 1 MRAENLLQLQHRTQKCTLGCPVLDRCLAGGVPCASVTEFVGESGCGKTQLCLQLALSAQL 60
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSND----HNPCDYIFVQSVHSVDQLL 120
P SHGGLSASS+++HTEFPFP RRL LS FR S+ +PCD +F+++VHS +LL
Sbjct: 61 PPSHGGLSASSIFIHTEFPFPFRRLRHLSRAFRASHPDLPCSDPCDRVFLRAVHSAHELL 120
Query: 121 DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAM 180
+++P IE+F+ +S + P+R+IVIDSIAALFRSDF+NT DL++RS LFF ISG L+ +
Sbjct: 121 NLIPTIETFLLHSKSPWRPVRIIVIDSIAALFRSDFENTGSDLRRRSSLFFGISGGLRQL 180
Query: 181 AVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLG-CLYSSGRPICPALGIAWANCVNSRLF 239
A FG+AV+VTNQVVDL+ G + G+LG LYSSGR +CPALG+AWA+CVNSRLF
Sbjct: 181 AKRFGIAVVVTNQVVDLI----GDGDVSFGSLGNGLYSSGRRVCPALGLAWAHCVNSRLF 236
Query: 240 LSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFG 299
LS++ED E V R + VVFAPHL +SCE+ I EGVFG
Sbjct: 237 LSKDED------------------EPPV---KTRKMRVVFAPHLPHSSCEYVIKGEGVFG 275
Query: 300 VE 301
VE
Sbjct: 276 VE 277
>gi|242065454|ref|XP_002454016.1| hypothetical protein SORBIDRAFT_04g023090 [Sorghum bicolor]
gi|241933847|gb|EES06992.1| hypothetical protein SORBIDRAFT_04g023090 [Sorghum bicolor]
Length = 292
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/300 (47%), Positives = 185/300 (61%), Gaps = 37/300 (12%)
Query: 4 PMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQ 63
P P LL + T K ++GCP++DR L GG+P S+TE+ ES +GKTQ CLQL L
Sbjct: 24 PENPLLLLPSSRVT-KLSLGCPLLDRLLSGGLPAASVTEIAGESATGKTQLCLQLALL-- 80
Query: 64 LPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIM 123
+ LSASSL+LH++ PFP+ RL +L+ RP + D++ V + HS LL ++
Sbjct: 81 --APQSPLSASSLFLHSDLPFPLHRLRRLAPKSRP----DILDHVLVAAAHSPTDLLSLL 134
Query: 124 PKIESFIKNSSNS--RLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ + + N S RLPIRLI++DSIA+LFR+DFD + DL++RS LFF+IS LK +A
Sbjct: 135 ARAQRLLANPGRSPHRLPIRLILLDSIASLFRADFDASPADLRRRSALFFQISAKLKELA 194
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
V+VTNQVVD++E EG GN +SSGR + PALGIAWANCVN RLFL+
Sbjct: 195 YRHQCVVVVTNQVVDVVE--EG-----AGNT-VAWSSGRRVSPALGIAWANCVNMRLFLT 246
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
R GG G SGS RR + V FAPHL + SCEF I R+GVFGVE
Sbjct: 247 RE-----------VGGDGASGS-------ARRRMKVAFAPHLPERSCEFMIRRDGVFGVE 288
>gi|413937284|gb|AFW71835.1| hypothetical protein ZEAMMB73_748424 [Zea mays]
Length = 291
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/285 (47%), Positives = 178/285 (62%), Gaps = 36/285 (12%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K ++GCP++DR L GG+P S+TE+ ES SGKTQ CLQL L A L LSASSL+L
Sbjct: 38 KLSLGCPLLDRLLCGGLPAASVTEIAGESASGKTQLCLQLALLAPL----SPLSASSLFL 93
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNS-- 136
H++ PFP+ RL +L+ RP + D++ V + HS LL ++ + + + N S
Sbjct: 94 HSDLPFPLHRLRRLAPKSRP----DILDHVLVAAAHSPTDLLSLLARAQRLLANPGRSPH 149
Query: 137 RLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
RLPIRLI++DSIA+LFR DFD + DL++RS LFF+IS LK +A V+VTNQVVD
Sbjct: 150 RLPIRLILLDSIASLFRGDFDASPADLRRRSALFFQISAKLKELAYRHQCVVVVTNQVVD 209
Query: 197 LMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNG 256
++E + G +SSGR + PALGIAWANCVN+RLFL+R +
Sbjct: 210 VVEGDAGNT--------VAWSSGRRLSPALGIAWANCVNTRLFLTREVE----------- 250
Query: 257 GVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G G SGS RR + V FAPHL + SCEF I R+GVFGVE
Sbjct: 251 GNGTSGS-------ARRWMKVAFAPHLPEQSCEFVIRRDGVFGVE 288
>gi|357142596|ref|XP_003572626.1| PREDICTED: DNA repair protein XRCC3 homolog [Brachypodium
distachyon]
Length = 288
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 137/285 (48%), Positives = 180/285 (63%), Gaps = 38/285 (13%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K ++GCP++DR L GG+P S+TE+ ES +GKTQ CLQL L A L LS+SSL+L
Sbjct: 36 KLSLGCPLLDRFLSGGLPAASVTEIAGESAAGKTQLCLQLALLAPL----SPLSSSSLFL 91
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNS-- 136
+++ PFP+RRL L+ RP + D++ V +VHS LL ++ + + + + S S
Sbjct: 92 YSDLPFPLRRLRLLAPKSRP----DLLDHVLVAAVHSPSDLLSLLSRAQHHLAHPSRSPN 147
Query: 137 RLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
RLPIRLI++DSIA+LFRSDFD + DLK+RS LFFKIS LK +A V+VTNQVVD
Sbjct: 148 RLPIRLILLDSIASLFRSDFDASPADLKRRSGLFFKISAKLKELAYRHQCVVVVTNQVVD 207
Query: 197 LMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNG 256
++E N G +SSGR + PALG+AWANCVN+RLFL+R D
Sbjct: 208 VVEGNTGNT--------VAWSSGRQVSPALGLAWANCVNTRLFLTREVD----------- 248
Query: 257 GVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G GGS +R + VVFAPHL + +CEF I R GVFGVE
Sbjct: 249 GNGGS---------VKRHMKVVFAPHLPERTCEFVIRRTGVFGVE 284
>gi|115446741|ref|NP_001047150.1| Os02g0562100 [Oryza sativa Japonica Group]
gi|46391018|dbj|BAD16552.1| putative XRCC3 [Oryza sativa Japonica Group]
gi|113536681|dbj|BAF09064.1| Os02g0562100 [Oryza sativa Japonica Group]
gi|125582531|gb|EAZ23462.1| hypothetical protein OsJ_07156 [Oryza sativa Japonica Group]
Length = 290
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/284 (45%), Positives = 174/284 (61%), Gaps = 40/284 (14%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K ++GCP++DR L GG+P S+TE+ ES SGKTQ CLQL L A L LSAS L+L
Sbjct: 42 KLSLGCPVLDRLLSGGLPPASVTEIAGESASGKTQLCLQLALLAPL----SPLSASCLFL 97
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
H++ PFP+RRL L+ RP + D++ V + HS L+ ++ + + + + RL
Sbjct: 98 HSDLPFPLRRLRGLAPKSRP----DLLDHVLVAAAHSPSDLISLLSRAQRLLAHPG--RL 151
Query: 139 P-IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDL 197
P +RLI++DSIA+LFR+DFD + DLK+RS LFF+IS LK +A V+VTNQVVD+
Sbjct: 152 PPVRLILVDSIASLFRADFDASPADLKRRSALFFRISAKLKELAHRHRCVVVVTNQVVDV 211
Query: 198 MEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGG 257
+E G +SSGR + PALGIAWANCVN+RLFL+R+ D
Sbjct: 212 VEGEAGNT--------VAWSSGRRVSPALGIAWANCVNTRLFLTRDAD------------ 251
Query: 258 VGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G G RR + V FAPHL + +CEF I R+GVFGVE
Sbjct: 252 --GRGC-------ARRRMKVAFAPHLPERACEFVIRRDGVFGVE 286
>gi|125539912|gb|EAY86307.1| hypothetical protein OsI_07680 [Oryza sativa Indica Group]
Length = 290
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/284 (45%), Positives = 175/284 (61%), Gaps = 40/284 (14%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K ++GCP++DR L GG+P S+TE+ ES SGKTQ CLQL L A L LSAS L+L
Sbjct: 42 KLSLGCPVLDRLLSGGLPPASVTEIAGESASGKTQLCLQLALLAPL----SPLSASCLFL 97
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
H++ PFP+RRL L+ RP + D++ V + HS L+ ++ + + + + RL
Sbjct: 98 HSDLPFPLRRLRGLAPKSRP----DLLDHVLVAAAHSPSDLISLLSRAQRLLAHPG--RL 151
Query: 139 P-IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDL 197
P +RLI++DSIA+LFR+DFD + DLK+RS LFF+IS LK +A V+VTNQVVD+
Sbjct: 152 PPVRLILVDSIASLFRADFDASPADLKRRSALFFRISAKLKELAHRHRCVVVVTNQVVDV 211
Query: 198 MEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGG 257
+E G +SSGR + PALGIAWANCVN+RLFL+R+ D
Sbjct: 212 VEGEAGNT--------VAWSSGRRVSPALGIAWANCVNTRLFLTRDAD------------ 251
Query: 258 VGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G G RR ++V FAPHL + +CEF I R+GVFGVE
Sbjct: 252 --GRGC-------ARRRMNVAFAPHLPERACEFVIRRDGVFGVE 286
>gi|440797025|gb|ELR18120.1| DNA repair protein XRCC3, putative [Acanthamoeba castellanii str.
Neff]
Length = 403
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 163/313 (52%), Gaps = 35/313 (11%)
Query: 13 NPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLS 72
+P T K +GCP++D+CLGGG+ ITE+ E+GSGKTQ CLQL L QLP GGL
Sbjct: 102 DPSFTHKLKLGCPLLDQCLGGGLLPRHITEIAGEAGSGKTQLCLQLALQVQLPPEEGGLG 161
Query: 73 ASSLYLHTEFPFPMRRLHQLSHTFRPSNDH---------NPCDYIFVQSVHSVDQLLDIM 123
++Y+ TE FP RRL QL FR + H + D I+++ V S+DQL M
Sbjct: 162 GGAIYIGTEGNFPQRRLDQLHEAFRHKHAHVFPPRRKGFDLRDNIYIKHVGSIDQLFHSM 221
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
K + N +RL+++DSIAAL R ++ + + +RS + F + LK +A
Sbjct: 222 LKQVPPLVQQRN----VRLVIVDSIAALLRYEYGSGTSQMVERSRVLFSQANQLKQIADQ 277
Query: 184 FGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRN 243
+ V+V NQV D ++ + V L + + + PALG+AW+NC+NSRL LS+
Sbjct: 278 LQVVVVVINQVSDYVDDSRLV-------LSDFAAHKKRVVPALGLAWSNCINSRLLLSKT 330
Query: 244 EDFV-------VRENQMVNGGVGGSGSEDFVCRRTR--------RSLHVVFAPHLADTSC 288
N + G G G E +R R + VVF+P++ + SC
Sbjct: 331 RSTYRGAVSSSTVSNASDDDGEGEEGQERKPKKRRVSNEVTVGIRDMKVVFSPYIPNNSC 390
Query: 289 EFEITREGVFGVE 301
F I +GV GVE
Sbjct: 391 SFIIEGDGVRGVE 403
>gi|432947346|ref|XP_004084000.1| PREDICTED: DNA repair protein XRCC3-like [Oryzias latipes]
Length = 342
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 148/288 (51%), Gaps = 42/288 (14%)
Query: 22 VGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTE 81
V CP++D L GG+P ITEL +SG+GKTQ LQ++LS Q P HGGL +LY+ TE
Sbjct: 84 VSCPVLDGLLRGGLPVGGITELSGQSGAGKTQLALQISLSVQYPVEHGGLGGGALYICTE 143
Query: 82 FPFPMRRLHQLSHTFRPSNDHNP---------CDYIFVQSVHSVDQLLDIMPKIESFIKN 132
FP+RRL Q+ P D+++++ +D L + + +
Sbjct: 144 DSFPIRRLQQMISEQANLRSEVPSSLIRGLRFSDHVYIEHAADLDSLQVCLSRRAPVLLA 203
Query: 133 SSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTN 192
+ +RLIV+DS+AALFRS+F +D +R+ S ML ++ F VL N
Sbjct: 204 AGL----VRLIVVDSVAALFRSEFQA--EDWMERNKQLLTFSSMLHQLSQEFTTPVLCIN 257
Query: 193 QVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQ 252
QV D+++ ++ +LG L SS + PALG+AWAN V RL + R + V R +Q
Sbjct: 258 QVTDVLKDHD--------SLGPLSSS---VTPALGLAWANQVLVRLMIRRLQKTVSRGDQ 306
Query: 253 MVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
R L VVFAPHLA + CE + REGV GV
Sbjct: 307 ----------------SSALRQLEVVFAPHLARSKCEVAVWREGVRGV 338
>gi|255083542|ref|XP_002504757.1| XRCC3 DNA recombinase [Micromonas sp. RCC299]
gi|226520025|gb|ACO66015.1| XRCC3 DNA recombinase [Micromonas sp. RCC299]
Length = 382
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 173/330 (52%), Gaps = 38/330 (11%)
Query: 5 MTPQNLLDNPLT-TEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQ 63
+T + + +P T K T CP+ID+ L GG+P +TEL E+G+ KTQ LQL L+AQ
Sbjct: 12 VTRERISADPSTWAPKLTTACPVIDKWLRGGVPTRHVTELTGEAGAAKTQLALQLLLNAQ 71
Query: 64 LPSSHGGLSASSLYLHTEFPFPMRRLHQL-----SHTFRPSNDHNPCDYIFVQSVHSVD- 117
LP GGL +++Y+HTE P+ RL Q+ ++ DH+P DY+++ D
Sbjct: 72 LPREVGGLDGAAVYVHTEGRAPLARLRQMISKRQIYSAHLPPDHDPLDYVYLVKTLEEDP 131
Query: 118 -QLLDIMPKIESFIKN-SSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISG 175
L D + + + + R P+RLIV+DS+++ FR +T + + +R+ + +++
Sbjct: 132 ESLWDALASVADVLTDPPGGPRRPVRLIVVDSVSSPFRETDASTKEGVFERTGILSRVAA 191
Query: 176 MLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLR------VGNLGCLYSSGRPICPALGIA 229
++ A +AV+VTN V D + ++G G G G L SSGRP+ PALG+
Sbjct: 192 LISEYAHRADVAVVVTNHVSDAVR-DDGRGGFDSRQRRLFGPSGDLRSSGRPVQPALGLF 250
Query: 230 WANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTS-- 287
WANCVN+R+FLSR + G+ SG V RR VVF+ HL T+
Sbjct: 251 WANCVNTRVFLSRTGGSAGGYDNDGRVGLVDSGGTAVV----RRHASVVFSSHLPSTAPA 306
Query: 288 ----------------CEFEITREGVFGVE 301
CEFE+ +GV+GVE
Sbjct: 307 WGGALDDGWGSSAVRPCEFEVREDGVWGVE 336
>gi|348536303|ref|XP_003455636.1| PREDICTED: DNA repair protein XRCC3-like [Oreochromis niloticus]
Length = 339
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 155/307 (50%), Gaps = 45/307 (14%)
Query: 4 PMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQ 63
P+T Q L +GCP++DR L GG+P ITEL ESG+GKTQ LQL+LS Q
Sbjct: 62 PITAQQLQHG---VSGVRLGCPVLDRLLRGGLPVGGITELAGESGTGKTQVGLQLSLSVQ 118
Query: 64 LPSSHGGLSASSLYLHTEFPFPMRRLHQLS------HTFRPSNDHNP---CDYIFVQSVH 114
P+ HGGL A +LY+ TE FP++RLHQL + P++ N D+++++
Sbjct: 119 YPAEHGGLGAGALYVCTEDSFPIKRLHQLIGEQVCLRSDVPADLVNSLRFSDHVYIEHAA 178
Query: 115 SVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKIS 174
+D L + + + +R +RLIV+DS+AALFR++F DD +R+ S
Sbjct: 179 DLDSLQVCLTRRARLLL----ARGLVRLIVVDSVAALFRAEFQ--ADDWLERNRRLLTFS 232
Query: 175 GMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCV 234
L ++ F VL NQV VN L L S + PALG+AWAN V
Sbjct: 233 STLHHLSQEFSTPVLCINQVTP-----SSVNFL------LLRPSSSTVSPALGLAWANQV 281
Query: 235 NSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITR 294
RL + R + V+R G + RR L VVFAPHLA + +
Sbjct: 282 MVRLMMRRLQGMVIR------------GEQSSALRR----LEVVFAPHLARDGQDTAVWT 325
Query: 295 EGVFGVE 301
EG+ GVE
Sbjct: 326 EGLRGVE 332
>gi|327259038|ref|XP_003214345.1| PREDICTED: DNA repair protein XRCC3-like [Anolis carolinensis]
Length = 375
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 154/304 (50%), Gaps = 29/304 (9%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T L + K ++GCP++D L GGIP ITE+ ES +GKTQ LQL LS Q
Sbjct: 87 LTALQLFKDKNQRRKLSLGCPVLDGFLQGGIPLTGITEIAGESSAGKTQIALQLALSIQY 146
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQL-LDIM 123
P +GGL + ++Y+ TE FP +RL QL + +N + I VQ + +++ ++
Sbjct: 147 PYKYGGLESGAVYICTEDAFPNKRLQQLIQ--QQANLRDDVPPIVVQKIKFGNRIFVEHT 204
Query: 124 PKIESFIKNSSN------SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGML 177
+++F +N SR +RLI++DSIAALFR +F LK + L F L
Sbjct: 205 ADLDAFRNCITNRIGILLSRGMVRLIIVDSIAALFRCEFGAKDSVLKAKYLLMF--GAKL 262
Query: 178 KAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSR 237
++ F + ++ NQV D M+ G V + C + + + PALGI W+N + R
Sbjct: 263 HELSSQFQIPIVCINQVTDTMD----TAGRAVHSPSC---TAQRVAPALGITWSNQLLMR 315
Query: 238 LFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
L SR F N G R+L V+FAPHL TSC++ I EGV
Sbjct: 316 LMASRTVHFTQTANDAHQHNRGA-----------LRTLRVIFAPHLPQTSCQYTINLEGV 364
Query: 298 FGVE 301
G++
Sbjct: 365 RGIK 368
>gi|61806653|ref|NP_001013559.1| DNA repair protein XRCC3 [Danio rerio]
gi|60552509|gb|AAH90820.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [Danio rerio]
gi|182888930|gb|AAI64394.1| Xrcc3 protein [Danio rerio]
Length = 352
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 150/294 (51%), Gaps = 44/294 (14%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + CP++D + GG+P ITEL ES +GKTQFCLQL LS Q P HGGL++ ++Y+
Sbjct: 81 RLSFACPVLDGLMRGGLPLRGITELAGESAAGKTQFCLQLCLSVQYPQEHGGLNSGAVYI 140
Query: 79 HTEFPFPMRRLHQL-SHTFRPSNDHNPC--------DYIFVQSVHSVDQL-LDIMPKIES 128
TE FP++RL QL + R D P D I+++ ++ L + + ++
Sbjct: 141 CTEDSFPIKRLRQLITQQPRLRPDLPPALIHSLRFSDNIYIEHAADLEALQVCVSQRVPV 200
Query: 129 FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAV 188
+K R +RL+V+DS+AALFRS+F D+ +RS S L ++ + V
Sbjct: 201 LLK-----RGLVRLLVVDSVAALFRSEFQ--ADEAVQRSRHLLAFSSTLHRLSHTYAAPV 253
Query: 189 LVTNQVVDLME-PNEGVNGLRVGNLGCLYS-SGRPICPALGIAWANCVNSRLFLSRNEDF 246
L NQV D+++ PN G C Y G + PALGIAWAN V RL L R
Sbjct: 254 LCVNQVTDVVDGPNPG---------RCDYGLVGSKVLPALGIAWANQVMVRLMLRRL--- 301
Query: 247 VVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
G S+ C R L VVFAPHL +SC + EGV G+
Sbjct: 302 -----------AGQVKSDSRSC--APRKLEVVFAPHLPRSSCLCGVWEEGVRGI 342
>gi|351698467|gb|EHB01386.1| DNA repair protein XRCC3, partial [Heterocephalus glaber]
Length = 349
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/297 (36%), Positives = 145/297 (48%), Gaps = 36/297 (12%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P + ++GCP +DR L GG+P + ITEL S SGKTQ LQL L+ Q P HGGL A
Sbjct: 76 PTQHHRLSLGCPRLDRLLSGGLPLDGITELAGRSSSGKTQLALQLCLAVQFPRQHGGLEA 135
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNP--------CDYIFVQSVHSVDQLLD-IMP 124
++Y+ TE FP +RL QL + D D IFV+ VD LL+ +
Sbjct: 136 GAVYICTEDVFPSKRLRQLIAQPQLRADVPGEVVQSIRFGDQIFVEHAADVDALLECVSH 195
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K+ + SR +RL+V+DS+AA FR +FD+ + R L + L+ ++ F
Sbjct: 196 KVPMLL-----SRGLVRLLVVDSVAAPFRCEFDSQASVARAR--LLQSLGATLRRLSSTF 248
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLG-CLYSSGRPICPALGIAWANCVNSRLFLSRN 243
VL NQV P G G++ C +CPALGI WAN + RL R
Sbjct: 249 QSPVLCVNQV----SPEVWDAGPVKGSVPFCPSPQDERLCPALGITWANQLLVRLMADR- 303
Query: 244 EDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
VRE + G G R+L VVFAPHL SC + ++ EGV G
Sbjct: 304 ----VREEEASLGPSGHPA----------RTLRVVFAPHLPPCSCSYTVSEEGVRGA 346
>gi|318056252|ref|NP_001187675.1| DNA repair protein XRCC3 [Ictalurus punctatus]
gi|308323669|gb|ADO28970.1| DNA repair protein XRCC3 [Ictalurus punctatus]
Length = 349
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 151/293 (51%), Gaps = 38/293 (12%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + CP++D L GG+P + ITEL ES +GKTQF LQL+LS Q HGGL A ++Y+
Sbjct: 81 RLSFACPVLDGLLHGGLPLHGITELAGESAAGKTQFGLQLSLSVQYSREHGGLGAGAVYI 140
Query: 79 HTEFPFPMRRLHQL-SHTFRPSNDHNPC--------DYIFVQSVHSVDQLLDIMPKIESF 129
TE PFP++RL QL + R D P D I+++ H+ D L+ + + +
Sbjct: 141 CTEDPFPIKRLRQLITQQSRLRPDVPPALIRSIRFSDNIYIE--HTAD--LEALQRCVTQ 196
Query: 130 IKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVL 189
+ R +RLIV+DS+AALFRS+F D+ +R+ S L ++ + V
Sbjct: 197 RLRTLLERGLVRLIVVDSVAALFRSEFQ--ADEAIERARHLLAFSATLHRLSHTYSTPVF 254
Query: 190 VTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVR 249
NQV D++ +G N R + G + S + PALGI WAN V RL L R E +R
Sbjct: 255 CINQVSDVV---DGPNPSR-RDYGLVESK---VLPALGIIWANQVMVRLMLRRQER-CLR 306
Query: 250 ENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVER 302
+ + R L VVFAPHLA SC + EGV G+ R
Sbjct: 307 SGEQTSAA---------------RELEVVFAPHLARASCLCGVWEEGVKGIAR 344
>gi|402877292|ref|XP_003902365.1| PREDICTED: DNA repair protein XRCC3 [Papio anubis]
Length = 346
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 142/296 (47%), Gaps = 40/296 (13%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P + ITEL S GKTQ LQL L+ Q P HGGL A
Sbjct: 76 PAQHQRLSLGCPVLDSLLCGGLPLDGITELAGRSSVGKTQLALQLCLAVQFPRQHGGLEA 135
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDY---------IFVQSVHSVDQLLDIMP 124
++Y+ TE FP +RL QL P + IF++ V VD LL+ +
Sbjct: 136 GAVYICTEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVN 195
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K + SR RL+VIDS+AA FR +FD+ + R + L+ ++ F
Sbjct: 196 KKVPVLL----SRGMARLVVIDSVAAPFRCEFDSQASAPRARRLQ--SLGAALRELSSAF 249
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
VL NQV + ME + G LG PALGI WAN + RL R
Sbjct: 250 QSPVLCINQVTEAMEEQSAAH----GPLGFWDERA---SPALGITWANQLLVRLLAER-- 300
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
+RE + GG R+L V+FAPHL +SC + I+ EGV G
Sbjct: 301 ---LREEEAALGGPA-------------RTLRVLFAPHLPPSSCSYTISAEGVRGT 340
>gi|395838671|ref|XP_003792234.1| PREDICTED: DNA repair protein XRCC3 [Otolemur garnettii]
Length = 349
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/304 (35%), Positives = 147/304 (48%), Gaps = 55/304 (18%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P ITEL S +GKTQ LQL L+ Q P HGGL A
Sbjct: 76 PAQHQRLSLGCPVLDGLLCGGLPLEGITELAGRSSAGKTQLALQLCLAVQFPQQHGGLEA 135
Query: 74 SSLYLHTEFPFPMRRLHQLS------HTFRPSNDHNPC---DYIFVQSVHSVDQLLD-IM 123
++Y+ TE FP RRL QL T P N D IFV+ V VD LL+ +
Sbjct: 136 GAVYVCTEDVFPTRRLQQLMALQTQLRTDVPGNVVQKIRFGDQIFVEHVADVDTLLECVT 195
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
K+ + SR RL+VIDS+AA FR +FD + R + L+ ++
Sbjct: 196 QKVPILL-----SRGMARLVVIDSVAAPFRCEFDGQASVPRARRLQ--SLGSALRRLSWA 248
Query: 184 FGLAVLVTNQVVD-LMEPNEGVNGLRVGNLGCLYSSGRP-------ICPALGIAWANCVN 235
F VL NQV + + EP+ S+ RP ICPALGI WAN +
Sbjct: 249 FQTPVLCINQVTEAVQEPS---------------SAPRPPGSTDGHICPALGITWANQLL 293
Query: 236 SRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITRE 295
RL R +RE + + G R+L V+FAPHL +SC + + E
Sbjct: 294 MRLMADR-----LREEEAMLDRPGCPA----------RTLRVLFAPHLPTSSCSYTVNAE 338
Query: 296 GVFG 299
GV G
Sbjct: 339 GVRG 342
>gi|109084988|ref|XP_001083970.1| PREDICTED: DNA repair protein XRCC3 isoform 2 [Macaca mulatta]
Length = 346
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 144/296 (48%), Gaps = 40/296 (13%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P + ITEL S GKTQ LQL L+ Q P HGGL A
Sbjct: 76 PAQHQRLSLGCPVLDSLLRGGLPLDGITELAGRSSVGKTQLALQLCLAVQFPRQHGGLEA 135
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDY---------IFVQSVHSVDQLLDIMP 124
++Y+ TE FP +RL QL P + IF++ V VD LL+ +
Sbjct: 136 GAIYICTEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDALLECVN 195
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K + SR RL+VIDS+AA FR +FD+ + R + L+ ++ F
Sbjct: 196 KKVPVLL----SRGMARLVVIDSVAAPFRCEFDSQASAPRARRLQ--SLGAALRELSSAF 249
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
VL NQV + ME + G LG + R + PALGI WAN + RL R
Sbjct: 250 QSPVLCINQVTEAMEEQGAAH----GPLG--FWDER-VSPALGITWANQLLVRLLAER-- 300
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
+RE + G R+L V+FAPHL +SC + I+ EGV G
Sbjct: 301 ---LREEEAALGCPA-------------RTLRVLFAPHLPPSSCSYTISAEGVRGT 340
>gi|2921500|gb|AAC04805.1| XRCC3 [Homo sapiens]
gi|15079849|gb|AAH11725.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [Homo sapiens]
Length = 346
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 145/296 (48%), Gaps = 40/296 (13%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P + ITEL S +GKTQ LQL L+ Q P HGGL A
Sbjct: 76 PTQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEA 135
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDY---------IFVQSVHSVDQLLDIMP 124
++Y+ TE FP +RL QL P + IF++ V VD LL+ +
Sbjct: 136 GAVYICTEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVN 195
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K + SR RL+VIDS+AA FR +FD+ + R + ML+ ++ F
Sbjct: 196 KKVPVLL----SRGMARLVVIDSVAAPFRCEFDSQASAPRARHLQ--SLGAMLRELSSAF 249
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
VL NQV + ME + G LG + R + PALGI WAN + RL R
Sbjct: 250 QSPVLCINQVTEAMEEQGAAH----GPLG--FWDER-VSPALGITWANQLLVRLLADR-- 300
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
+RE + G R+L V+ APHL +SC + I+ EGV G
Sbjct: 301 ---LREEEAALGCPA-------------RTLRVLSAPHLPPSSCSYTISAEGVRGT 340
>gi|355767815|gb|EHH62665.1| hypothetical protein EGM_21063 [Macaca fascicularis]
Length = 346
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 144/296 (48%), Gaps = 40/296 (13%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P + ITEL S GKTQ LQL L+ Q P HGGL A
Sbjct: 76 PAQHQRLSLGCPVLDSLLRGGLPLDGITELAGRSSVGKTQLALQLCLAVQFPRQHGGLEA 135
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDY---------IFVQSVHSVDQLLDIMP 124
++Y+ TE FP +RL QL P + IF++ V VD LL+ +
Sbjct: 136 XAVYICTEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDALLECVN 195
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K + SR RL+VIDS+AA FR +FD+ + R + L+ ++ F
Sbjct: 196 KKVPVLL----SRGMARLVVIDSVAAPFRCEFDSQASAPRARRLQ--SLGAALRELSSAF 249
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
VL NQV + ME + G LG + R + PALGI WAN + RL R
Sbjct: 250 QSPVLCINQVTEAMEEQGAAH----GPLG--FWDER-VSPALGITWANQLLVRLLAER-- 300
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
+RE + G R+L V+FAPHL +SC + I+ EGV G
Sbjct: 301 ---LREEEAALGCPA-------------RTLRVLFAPHLPPSSCSYTISAEGVRGT 340
>gi|355693597|gb|EHH28200.1| hypothetical protein EGK_18581 [Macaca mulatta]
gi|387540488|gb|AFJ70871.1| DNA repair protein XRCC3 [Macaca mulatta]
Length = 346
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 144/296 (48%), Gaps = 40/296 (13%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P + ITEL S GKTQ LQL L+ Q P HGGL A
Sbjct: 76 PAQHQRLSLGCPVLDSLLRGGLPLDGITELAGRSSVGKTQLALQLCLAVQFPRQHGGLEA 135
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDY---------IFVQSVHSVDQLLDIMP 124
++Y+ TE FP +RL QL P + IF++ V VD LL+ +
Sbjct: 136 GAVYICTEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDALLECVN 195
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K + SR RL+VIDS+AA FR +FD+ + R + L+ ++ F
Sbjct: 196 KKVPVLL----SRGMARLVVIDSVAAPFRCEFDSQASAPRARRLQ--SLGAALRELSSAF 249
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
VL NQV + ME + G LG + R + PALGI WAN + RL R
Sbjct: 250 QSPVLCINQVTEAMEEQGAAH----GPLG--FWDER-VSPALGITWANQLLVRLLAER-- 300
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
+RE + G R+L V+FAPHL +SC + I+ EGV G
Sbjct: 301 ---LREEEAALGCPA-------------RTLRVLFAPHLPPSSCSYTISAEGVRGT 340
>gi|21312694|ref|NP_083151.1| DNA repair protein XRCC3 [Mus musculus]
gi|20140780|sp|Q9CXE6.1|XRCC3_MOUSE RecName: Full=DNA repair protein XRCC3; AltName: Full=X-ray repair
cross-complementing protein 3
gi|12852383|dbj|BAB29391.1| unnamed protein product [Mus musculus]
Length = 349
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 152/296 (51%), Gaps = 37/296 (12%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D+ LGGG+P IT L S +GKTQ LQL L+ Q P +GGL A
Sbjct: 76 PEQHQRLSLGCPVLDQFLGGGLPLEGITGLAGCSSAGKTQLALQLCLAVQFPRQYGGLEA 135
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNP---------CDYIFVQSVHSVDQLLDIMP 124
++Y+ TE FP +RL QL R P ++IF++ VD LL+ +
Sbjct: 136 GAVYICTEDAFPSKRLWQLIAQQRRLRTDAPEELIEKIRFSNHIFIEHAADVDTLLECVS 195
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K + SR RL+V+DSIAA FR +F + R+ L + L+ ++ F
Sbjct: 196 KKVPILL----SRGMARLVVVDSIAAPFRCEFHLQASAI--RAKLLLSLGATLRRLSSTF 249
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
VL NQV D++E + V+ +LG +S + PALGI WAN + RL + R
Sbjct: 250 RSPVLCINQVTDMVEDQQSVS----RSLG---ASEERLSPALGITWANQLLMRLMVDRTH 302
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
E+ + G + R R+L V+FAPHL +SC + ++ EG+ G+
Sbjct: 303 -----EDDVTTG----------LPRSPVRTLRVLFAPHLPLSSCCYTVSGEGIRGM 343
>gi|126290417|ref|XP_001373207.1| PREDICTED: DNA repair protein XRCC3-like [Monodelphis domestica]
Length = 379
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 147/297 (49%), Gaps = 35/297 (11%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P +K GCP+ +R L GG+P ITELV +S +GKTQ LQL+L Q P +GGL +
Sbjct: 76 PAQHKKLGFGCPVFNRLLQGGLPLVGITELVGQSSAGKTQIGLQLSLCVQYPYEYGGLES 135
Query: 74 SSLYLHTEFPFPMRRLHQ---LSHTFR---PSNDHNPCDY---IFVQSVHSVDQLLDIMP 124
++Y+ TE FP +RL Q L H R P + + IF++ +D L + +
Sbjct: 136 GAIYICTEDVFPDKRLQQLIALQHQLRTDVPQDVIKKIKFGNSIFIEHAADIDALFECVT 195
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K + SR +RLI+IDSIAALFR +F + K +L + L ++ GF
Sbjct: 196 KRAPILL----SRGMVRLIIIDSIAALFRCEF-GIQHSITKAKYL-QTLGAKLHQLSSGF 249
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
VL NQV D ++ GL NL L + PALGI W+N + RL +SR
Sbjct: 250 QSPVLCINQVTDTVDE----RGLAGTNLDVLAR----VSPALGITWSNQLLMRLMVSRLA 301
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+ R+ G R+L V+FAPHL + C + ++ EGV G +
Sbjct: 302 RELSRDTHAAATGT------------VVRTLSVIFAPHLPQSCCHYTVSAEGVKGAD 346
>gi|390355303|ref|XP_003728518.1| PREDICTED: DNA repair protein XRCC3-like [Strongylocentrotus
purpuratus]
Length = 355
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 146/293 (49%), Gaps = 31/293 (10%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T GCPI+D L GGI ITE+ +S +GKTQ CLQL L+AQLP GGL+ +Y+ T
Sbjct: 82 TTGCPILDEFLHGGILVKGITEIAGQSAAGKTQLCLQLCLTAQLPVQQGGLANGVVYICT 141
Query: 81 EFPFPMRRLHQLSHTFRP------SNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSS 134
E FP +RL QL +F + D+I+V+ DQL + K +
Sbjct: 142 EDVFPSKRLQQLISSFNRRIGPALAKQLAVGDHIYVEHAAEKDQLWHCLEKRLPLLL--- 198
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
SR ++L V+DS+AA+FRS+F+ + D +R+ ++ L ++ F +AV+ NQV
Sbjct: 199 -SRGMVKLAVVDSLAAIFRSEFE--LRDTIRRARELQRVGAHLHRLSSQFNVAVVCVNQV 255
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFV----VRE 250
ME L + + PALG+ W+N V RL LSR +
Sbjct: 256 TANME-------------ASLDPTESEMMPALGLTWSNIVKVRLMLSRTPYRLPPSDTTN 302
Query: 251 NQMVNGGVGGSGSEDFVCRRT--RRSLHVVFAPHLADTSCEFEITREGVFGVE 301
N+ G V G S + + R + ++FAPHL C + + +GV G++
Sbjct: 303 NRTDRGSVNGECSHESEQKAEIPVRQIEILFAPHLPKEVCYYIVDADGVKGLQ 355
>gi|115754819|ref|XP_790563.2| PREDICTED: DNA repair protein XRCC3-like [Strongylocentrotus
purpuratus]
Length = 355
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 146/293 (49%), Gaps = 31/293 (10%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T GCPI+D L GGI ITE+ +S +GKTQ CLQL L+AQLP GGLS +Y+ T
Sbjct: 82 TTGCPILDEFLHGGILVKGITEIAGQSAAGKTQLCLQLCLTAQLPVQQGGLSNGVVYICT 141
Query: 81 EFPFPMRRLHQLSHTFRP------SNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSS 134
E FP +RL QL +F + D+I+V+ DQL + K +
Sbjct: 142 EDVFPSKRLQQLISSFNSKIGPALAKQLAVGDHIYVEHAAEKDQLWHCLEKRLPLLL--- 198
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
SR ++L V+DS+AA+FRS+F+ + D +R+ ++ L ++ F +AV+ NQV
Sbjct: 199 -SRGMVKLAVVDSLAAIFRSEFE--LRDTIRRARELQRVGAHLHRLSSQFNVAVVCVNQV 255
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFV----VRE 250
M+ L + + PALG+ W+N V RL LSR +
Sbjct: 256 TANMK-------------ASLDPTESEMMPALGLTWSNIVKVRLMLSRTPYRLPPSDTTN 302
Query: 251 NQMVNGGVGGSGSEDFVCRRT--RRSLHVVFAPHLADTSCEFEITREGVFGVE 301
N+ G V G S + + R + ++FAPHL C + + +GV G++
Sbjct: 303 NRTDRGSVNGECSHESEQKAEIPVRQIEILFAPHLPKEVCYYIVDADGVKGLQ 355
>gi|403284072|ref|XP_003933408.1| PREDICTED: DNA repair protein XRCC3 [Saimiri boliviensis
boliviensis]
Length = 367
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/297 (35%), Positives = 148/297 (49%), Gaps = 42/297 (14%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P + ITEL S +GKTQ LQL L+ Q P HGGL A
Sbjct: 97 PAQHQRLSLGCPVLDALLRGGLPLDGITELAGHSSAGKTQLALQLCLAVQFPRQHGGLEA 156
Query: 74 SSLYLHTEFPFPMRRLHQL-SHTFRPSNDHNPCDY---------IFVQSVHSVDQLLDIM 123
++Y+ TE FP +RL QL +H R D P + IF++ VD LL+ +
Sbjct: 157 GAVYICTEDAFPHKRLQQLMAHQPRLRTD-VPGELLQKLRFGSQIFIEHAADVDTLLECV 215
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
K + SR RL+VIDS+AA FR +FD+ + R + L+ ++
Sbjct: 216 NKKVPVLL----SRGMARLVVIDSVAAPFRCEFDSQASIPRARCLQ--SLGATLRELSSA 269
Query: 184 FGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRN 243
F VL NQV + +E V+G + R I PALGI WAN + RL R
Sbjct: 270 FQSPVLCINQVTEAVEEQSTVHG------PPGFWDER-ISPALGITWANQLLVRLLADR- 321
Query: 244 EDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
+RE + G + R+L V+FAPHL +SC + ++ EGV G
Sbjct: 322 ----LREEEAALG-------------QPVRTLRVLFAPHLPPSSCSYTVSTEGVRGT 361
>gi|344273765|ref|XP_003408689.1| PREDICTED: DNA repair protein XRCC3-like [Loxodonta africana]
Length = 341
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 150/305 (49%), Gaps = 63/305 (20%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P+ ++ ++GCP++DR L GG+P + ITEL S +GKTQ LQL L+ QLP HGGL A
Sbjct: 76 PVQHQRLSLGCPVLDRLLRGGLPLDGITELAGCSSAGKTQLALQLCLAVQLPQQHGGLEA 135
Query: 74 SSLYLHTEFPFPMRRLHQL-SHTFR-----PSNDHNPC---DYIFVQSVHSVDQLLDIMP 124
++Y+ TE FP RRL QL +H R P + D IF++ VD LL+ +
Sbjct: 136 GAVYICTEDVFPDRRLQQLITHQPRLRAGVPGELLSKVRFGDQIFIEHAADVDTLLECVS 195
Query: 125 KIESFIKNSSNSRLPI-------RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGML 177
+ R+PI RL+V+DS+AA FR +FD+ L R+ + L
Sbjct: 196 R-----------RVPILLARGMARLVVLDSVAAPFRCEFDSQA--LTARARHLQTLGAAL 242
Query: 178 KAMAVGFGLAVLVTNQVVDLMEPNE--GVNGLRVGNLGCLYSSGRPICPALGIAWANCVN 235
+ ++ F VL NQV ++ E G G +S R + PALG AW+N +
Sbjct: 243 RHLSCSFQSPVLCINQVTEVAEEQRPAGPQG---------FSDER-VSPALGTAWSNQLL 292
Query: 236 SRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITRE 295
RL R G E+ R+L VVFAPHL TSC + I E
Sbjct: 293 MRLTAER-----------------ARGKEEPA-----RTLRVVFAPHLPPTSCLYTIGAE 330
Query: 296 GVFGV 300
GV G+
Sbjct: 331 GVQGM 335
>gi|291410935|ref|XP_002721745.1| PREDICTED: X-ray repair cross complementing protein 3-like
[Oryctolagus cuniculus]
Length = 344
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 143/297 (48%), Gaps = 42/297 (14%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P + ITEL +GKTQ LQL L+ Q P HGGL A
Sbjct: 74 PAQHQRLSLGCPVLDGLLRGGLPLDGITELAGPGSAGKTQLALQLCLAVQFPRQHGGLQA 133
Query: 74 SSLYLHTEFPFPMRRLHQL-SHTFRPSNDHNP--------CDYIFVQSVHSVDQLLD-IM 123
++Y+ TE FP RRL QL +R D IFV+ VD LL+ +
Sbjct: 134 GAVYICTEGAFPTRRLQQLIGQHWRLRADVARDEVGKIRFSSQIFVEHAADVDALLECVT 193
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
K+ + SR RL+VIDS+AA FR +FD + R + L+ ++
Sbjct: 194 RKVPVLL-----SRGMARLVVIDSVAAPFRCEFDAQASVPRARRLQ--ALGAALRRLSHA 246
Query: 184 FGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRN 243
F VL NQV D +E + GL+ G +S PALG AWAN + RL R
Sbjct: 247 FQSPVLCINQVTDTVEEQDTAPGLQ--GFGDTRAS-----PALGTAWANQLLLRLMADRR 299
Query: 244 EDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
R + V GG R+L V+F+PHL +SC + I EGV G
Sbjct: 300 -----RGEEAVLGGPA-------------RTLRVLFSPHLPPSSCAYTIHSEGVRGT 338
>gi|297695960|ref|XP_002825186.1| PREDICTED: DNA repair protein XRCC3 [Pongo abelii]
Length = 346
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 145/296 (48%), Gaps = 40/296 (13%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P + ITEL S +GKTQ LQL L+ Q P HGGL A
Sbjct: 76 PAQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEA 135
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDY---------IFVQSVHSVDQLLDIMP 124
++Y+ TE FP +RL QL P + IF++ V VD LL+ +
Sbjct: 136 GAVYICTEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVN 195
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K + SR RL+VIDS+AA FR +FD+ + R + L+ ++ F
Sbjct: 196 KKVPVLL----SRGMARLVVIDSVAAPFRCEFDSQASAPRARRLQ--SLGAALRELSSAF 249
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
VL NQV + +E + G LG + R + PALGI WAN + RL R
Sbjct: 250 QSPVLCINQVTEAVEEQGAAH----GPLG--FWDER-VSPALGITWANQLLVRLLADR-- 300
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
+RE + G R+L V+ APHLA +SC + I+ EGV G
Sbjct: 301 ---LREEEAALGCPA-------------RTLRVLSAPHLAPSSCSYTISAEGVRGT 340
>gi|4885659|ref|NP_005423.1| DNA repair protein XRCC3 [Homo sapiens]
gi|153946427|ref|NP_001093588.1| DNA repair protein XRCC3 [Homo sapiens]
gi|153946430|ref|NP_001093589.1| DNA repair protein XRCC3 [Homo sapiens]
gi|20140428|sp|O43542.1|XRCC3_HUMAN RecName: Full=DNA repair protein XRCC3; AltName: Full=X-ray repair
cross-complementing protein 3
gi|20514393|gb|AAM23015.1|AF508041_1 X-ray repair complementing defective repair in Chinese hamster
cells 3 [Homo sapiens]
gi|2921390|gb|AAC05368.1| X-ray repair cross-complementing protein 3 [Homo sapiens]
gi|12654421|gb|AAH01036.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [Homo sapiens]
gi|28071006|emb|CAD61884.1| unnamed protein product [Homo sapiens]
gi|30583673|gb|AAP36085.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [Homo sapiens]
gi|60655103|gb|AAX32115.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [synthetic construct]
gi|60655105|gb|AAX32116.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [synthetic construct]
gi|119602243|gb|EAW81837.1| X-ray repair complementing defective repair in Chinese hamster
cells 3, isoform CRA_a [Homo sapiens]
gi|119602244|gb|EAW81838.1| X-ray repair complementing defective repair in Chinese hamster
cells 3, isoform CRA_a [Homo sapiens]
gi|119602245|gb|EAW81839.1| X-ray repair complementing defective repair in Chinese hamster
cells 3, isoform CRA_a [Homo sapiens]
gi|119602246|gb|EAW81840.1| X-ray repair complementing defective repair in Chinese hamster
cells 3, isoform CRA_a [Homo sapiens]
gi|119602247|gb|EAW81841.1| X-ray repair complementing defective repair in Chinese hamster
cells 3, isoform CRA_a [Homo sapiens]
gi|119602248|gb|EAW81842.1| X-ray repair complementing defective repair in Chinese hamster
cells 3, isoform CRA_a [Homo sapiens]
gi|123982694|gb|ABM83088.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [synthetic construct]
gi|123997359|gb|ABM86281.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [synthetic construct]
gi|193784889|dbj|BAG54042.1| unnamed protein product [Homo sapiens]
gi|193785686|dbj|BAG51121.1| unnamed protein product [Homo sapiens]
gi|193785777|dbj|BAG51212.1| unnamed protein product [Homo sapiens]
gi|261861620|dbj|BAI47332.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [synthetic construct]
Length = 346
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 144/296 (48%), Gaps = 40/296 (13%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P + ITEL S +GKTQ LQL L+ Q P HGGL A
Sbjct: 76 PTQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEA 135
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDY---------IFVQSVHSVDQLLDIMP 124
++Y+ TE FP +RL QL P + IF++ V VD LL+ +
Sbjct: 136 GAVYICTEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVN 195
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K + SR RL+VIDS+AA FR +FD+ + R + L+ ++ F
Sbjct: 196 KKVPVLL----SRGMARLVVIDSVAAPFRCEFDSQASAPRARHLQ--SLGATLRELSSAF 249
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
VL NQV + ME + G LG + R + PALGI WAN + RL R
Sbjct: 250 QSPVLCINQVTEAMEEQGAAH----GPLG--FWDER-VSPALGITWANQLLVRLLADR-- 300
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
+RE + G R+L V+ APHL +SC + I+ EGV G
Sbjct: 301 ---LREEEAALGCPA-------------RTLRVLSAPHLPPSSCSYTISAEGVRGT 340
>gi|397470932|ref|XP_003807064.1| PREDICTED: DNA repair protein XRCC3 [Pan paniscus]
Length = 346
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 144/296 (48%), Gaps = 40/296 (13%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P + ITEL S +GKTQ LQL L+ Q P HGGL A
Sbjct: 76 PTQHQRLSLGCPVLDALLHGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEA 135
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDY---------IFVQSVHSVDQLLDIMP 124
++Y+ TE FP +RL QL P + IF++ V VD LL+ +
Sbjct: 136 GAVYICTEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVN 195
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K + SR RL+VIDS+AA FR +FD+ + R + L+ ++ F
Sbjct: 196 KKVPVLL----SRGMARLVVIDSVAAPFRCEFDSQASAPRARHLQ--SLGAALRELSSAF 249
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
VL NQV + ME G G LG + R + PALGI WAN + RL R
Sbjct: 250 QSPVLCINQVTEAMEE----QGAAHGPLG--FWDER-VSPALGITWANQLLVRLLADR-- 300
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
+RE + G R+L V+ APHL +SC + I+ EGV G
Sbjct: 301 ---LREEEAALGCPA-------------RTLRVLSAPHLPPSSCSYTISAEGVRGT 340
>gi|332843176|ref|XP_003314577.1| PREDICTED: DNA repair protein XRCC3 isoform 1 [Pan troglodytes]
gi|410260908|gb|JAA18420.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [Pan troglodytes]
Length = 346
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 144/296 (48%), Gaps = 40/296 (13%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P + ITEL S +GKTQ LQL L+ Q P HGGL A
Sbjct: 76 PTQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEA 135
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDY---------IFVQSVHSVDQLLDIMP 124
++Y+ TE FP +RL QL P + IF++ V VD LL+ +
Sbjct: 136 GAVYICTEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVN 195
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K + SR RL+VIDS+AA FR +FD+ + R + L+ ++ F
Sbjct: 196 KKVPVLL----SRGMARLVVIDSVAAPFRCEFDSQASAPRARHLQ--SLGAALRELSSAF 249
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
VL NQV + ME + G LG + R + PALGI WAN + RL R
Sbjct: 250 QSPVLCINQVTEAMEEQGAAH----GPLG--FWDER-VSPALGITWANQLLVRLLADR-- 300
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
+RE + G R+L V+ APHL +SC + I+ EGV G
Sbjct: 301 ---LREEEAALGCPA-------------RTLRVLSAPHLPPSSCSYTISAEGVRGT 340
>gi|332254242|ref|XP_003276237.1| PREDICTED: DNA repair protein XRCC3 [Nomascus leucogenys]
Length = 346
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 144/296 (48%), Gaps = 40/296 (13%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P + ITEL S +GKTQ LQL L+ Q P HGGL A
Sbjct: 76 PAQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEA 135
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDY---------IFVQSVHSVDQLLDIMP 124
++Y+ TE FP +RL QL P + IF++ V VD LL+ +
Sbjct: 136 GAVYICTEDAFPHKRLQQLMAQQPRLRTDVPGELLLKLRFGSQIFIEHVADVDTLLECVN 195
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K + SR RL++IDS+AA FR +FD+ + R + L+ ++ F
Sbjct: 196 KKVPVLL----SRGMARLVIIDSVAAPFRCEFDSQASAPRARRLQ--SLGAALRELSSAF 249
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
VL NQV + ME + G LG + R + PALGI WAN + RL R
Sbjct: 250 QSPVLCINQVTEAMEEQGAAH----GPLG--FWDER-VSPALGITWANQLLVRLLADR-- 300
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
+RE + G R+L V+ APHL +SC + I+ EGV G
Sbjct: 301 ---LREEEAALGCPA-------------RTLRVLSAPHLPPSSCSYTISAEGVRGT 340
>gi|30584233|gb|AAP36365.1| Homo sapiens X-ray repair complementing defective repair in Chinese
hamster cells 3 [synthetic construct]
gi|61371827|gb|AAX43738.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [synthetic construct]
gi|61371833|gb|AAX43739.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [synthetic construct]
Length = 347
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 144/296 (48%), Gaps = 40/296 (13%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P + ITEL S +GKTQ LQL L+ Q P HGGL A
Sbjct: 76 PTQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEA 135
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDY---------IFVQSVHSVDQLLDIMP 124
++Y+ TE FP +RL QL P + IF++ V VD LL+ +
Sbjct: 136 GAVYICTEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVN 195
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K + SR RL+VIDS+AA FR +FD+ + R + L+ ++ F
Sbjct: 196 KKVPVLL----SRGMARLVVIDSVAAPFRCEFDSQASAPRARHLQ--SLGATLRELSSAF 249
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
VL NQV + ME + G LG + R + PALGI WAN + RL R
Sbjct: 250 QSPVLCINQVTEAMEEQGAAH----GPLG--FWDER-VSPALGITWANQLLVRLLADR-- 300
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
+RE + G R+L V+ APHL +SC + I+ EGV G
Sbjct: 301 ---LREEEAALGCPA-------------RTLRVLSAPHLPPSSCSYTISAEGVRGT 340
>gi|118151310|ref|NP_001071585.1| DNA repair protein XRCC3 [Bos taurus]
gi|122132264|sp|Q08DH8.1|XRCC3_BOVIN RecName: Full=DNA repair protein XRCC3; AltName: Full=X-ray repair
cross-complementing protein 3
gi|115304929|gb|AAI23743.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [Bos taurus]
gi|296475234|tpg|DAA17349.1| TPA: DNA repair protein XRCC3 [Bos taurus]
Length = 341
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 142/297 (47%), Gaps = 47/297 (15%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P + ITEL S +GKTQ LQL L+ QLP HGGL A
Sbjct: 76 PEQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQLPPRHGGLGA 135
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDY---------IFVQSVHSVDQLLD-IM 123
++Y+ TE FP RRL QL + P IF++ VD LL +
Sbjct: 136 GAVYVCTEDAFPSRRLQQLIAQQQRLRADVPGHVISKIRFGHQIFIEHAADVDTLLQCVR 195
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
K+ + +R RL+VIDS+AA FR +FD L+ + L + L+ ++
Sbjct: 196 EKVPVLL-----ARGMARLVVIDSVAAPFRCEFDGAALALRAQRLL--ALGAELRRLSCA 248
Query: 184 FGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRN 243
F VL NQV + +E + V G G + PALGI WAN + RL R
Sbjct: 249 FRSPVLCVNQVTEAVEEQDLVAG----------PPG--MSPALGITWANQLLVRLLADRQ 296
Query: 244 EDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
E + G R+L VVFAPHL +SC + I EGV G+
Sbjct: 297 RP---EEAPLTPPG---------------RTLRVVFAPHLPASSCSYTIAAEGVRGM 335
>gi|148686665|gb|EDL18612.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [Mus musculus]
Length = 349
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 153/296 (51%), Gaps = 37/296 (12%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D+ LGGG+P IT L S +GKTQ LQL L+ Q P +GGL A
Sbjct: 76 PEQHQRLSLGCPVLDQFLGGGLPLEGITGLAGCSSAGKTQLALQLCLAVQFPRQYGGLEA 135
Query: 74 SSLYLHTEFPFPMRRLHQL-SHTFRPSNDHNP--------CDYIFVQSVHSVDQLLDIMP 124
++Y+ TE FP +RL QL + R D ++IF++ VD LL+ +
Sbjct: 136 GAVYICTEDAFPSKRLWQLIAQQPRLRTDAPEELIEKIRFSNHIFIEHAADVDTLLECVS 195
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K + SR RL+V+DSIAA FR +F + R+ L + L+ ++ F
Sbjct: 196 KKVPILL----SRGMARLVVVDSIAAPFRCEFHLQASAI--RAKLLLSLGATLRRLSSTF 249
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
VL NQV D++E + V+ +LG +S + PALGI WAN + RL + R
Sbjct: 250 RSPVLCINQVTDMVEDQQSVS----RSLG---ASEERLSPALGITWANQLLMRLMVDRTH 302
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
E+ + G + R R+L V+FAPHL +SC + ++ EG+ G+
Sbjct: 303 -----EDDVTTG----------LPRSPVRTLRVLFAPHLPLSSCCYTVSGEGIRGM 343
>gi|296215965|ref|XP_002754356.1| PREDICTED: DNA repair protein XRCC3 [Callithrix jacchus]
Length = 346
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 147/296 (49%), Gaps = 40/296 (13%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P + ITEL S +GKTQ LQL L+ Q P HGGL +
Sbjct: 76 PAQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLES 135
Query: 74 SSLYLHTEFPFPMRRLHQL-SHTFRPSND-------HNPC-DYIFVQSVHSVDQLLDIMP 124
++Y+ TE FP +RL QL +H R D P IF++ VD LL+ +
Sbjct: 136 GAVYICTEDAFPHKRLQQLMAHQPRLRTDVPGELLQRLPSGSQIFIEHAADVDTLLECVN 195
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K + SR RL+VIDS+AA FR +FD+ + R + L+ ++ F
Sbjct: 196 KKVPVLL----SRGMARLVVIDSVAAPFRCEFDSQASVPRARHLQ--SLGATLRELSSTF 249
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
VL NQV + ME G G G + R I PALGI WAN + RL R
Sbjct: 250 QSPVLCINQVTEAMEE----QGTAHGPPG--FWDER-IFPALGITWANQLLVRLLADR-- 300
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
+RE + G + R+L V+FAPHL +SC + I+ EGV G
Sbjct: 301 ---LREEEAALG-------------QPVRTLRVLFAPHLPPSSCSYTISTEGVRGT 340
>gi|147903064|ref|NP_001079887.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [Xenopus laevis]
gi|33417158|gb|AAH56103.1| MGC69118 protein [Xenopus laevis]
Length = 350
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 153/298 (51%), Gaps = 38/298 (12%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P +K ++GC ++D L GGIP ITE+ ES +GKTQ LQL LS Q P +GGL++
Sbjct: 76 PSQHQKLSLGCKVLDNFLRGGIPLVGITEIAGESSAGKTQIGLQLCLSVQYPVEYGGLAS 135
Query: 74 SSLYLHTEFPFPMRRLHQL---SHTFR---PSNDHNPC---DYIFVQSVHSVDQLLD-IM 123
++Y+ TE FP +RL QL H R PS+ D IFV+ VD L + I
Sbjct: 136 GAVYICTEDAFPSKRLQQLIKSQHKLRSDVPSDVIKNIRFGDSIFVEHTADVDTLTECIK 195
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
K+ + S IRL+VIDSIAALFR +F +K + + L ++
Sbjct: 196 KKVPVLLLRGS-----IRLVVIDSIAALFRCEFAAKDAAVKAKHLQ--TLGAKLHNISNR 248
Query: 184 FGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRN 243
F VL NQV D + +N + NLG + + PALGI+W+N + R+ ++R
Sbjct: 249 FITPVLCINQVTDRVRE---MNSEQDDNLGL---QDKKVVPALGISWSNQLLMRVMVART 302
Query: 244 EDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+ E + GG+ R++ VVFAPH+A +SC + + EGV G++
Sbjct: 303 QHTAPTE--LAAGGI-------------LRTMEVVFAPHIAQSSCYYTVDLEGVKGLD 345
>gi|405972678|gb|EKC37434.1| DNA repair protein XRCC3 [Crassostrea gigas]
Length = 309
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 141/272 (51%), Gaps = 35/272 (12%)
Query: 31 LGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLH 90
L GGI ITE+ ES SGKTQFCLQL L+ QLP GGL+A + Y+ TE FP +RL
Sbjct: 64 LTGGILSQGITEISGESASGKTQFCLQLCLTVQLPPEEGGLAAGAAYICTEDAFPSKRLS 123
Query: 91 QLSHTFRPSNDHNPC----DYIFVQSVHSVDQLLD-IMPKIESFIKNSSNSRLPIRLIVI 145
Q+ FR ++ D IF++ V +D L I K+ + + S ++L+++
Sbjct: 124 QMISYFRQRSEKRKQIPFGDNIFIEHVADLDSLNSCIHQKLPHLLSSGS-----VKLVIV 178
Query: 146 DSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVN 205
DS+AA+FR D++ + D+ KRS ++ L ++ + L ++ NQV D M+
Sbjct: 179 DSVAAVFRCDYE--LKDMYKRSKHMASLAASLHRISSKYCLPIVCVNQVTDSMQ------ 230
Query: 206 GLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSED 265
S G+ PALG+AW+N + RL LSR V ++ G V G
Sbjct: 231 -----------SIGKKNIPALGLAWSNQITCRLSLSRTNREVDLPRIILKGSVIGGFPTS 279
Query: 266 FVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
R+L VVFAP+L + S + I +EG+
Sbjct: 280 I------RTLEVVFAPNLPNLSLMYVIDQEGI 305
>gi|224051777|ref|XP_002200331.1| PREDICTED: DNA repair protein XRCC3 [Taeniopygia guttata]
Length = 347
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 148/301 (49%), Gaps = 37/301 (12%)
Query: 12 DN-PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGG 70
DN P +K ++GC ++D L GGIP ITEL ES +GKTQ LQL L Q P +GG
Sbjct: 73 DNFPSQHQKLSLGCSVLDNLLKGGIPLVGITELAGESSAGKTQIGLQLCLCVQYPYKYGG 132
Query: 71 LSASSLYLHTEFPFPMRRLHQL---SHTFR---PSNDHNPCDY---IFVQSVHSVDQLLD 121
L + ++Y+ TE FP +RL QL H R P+ + IFV+ +D
Sbjct: 133 LESGAVYICTEDVFPSKRLQQLIDQQHKLRADVPAEIIQKIRFGNSIFVEQAADLDTFQQ 192
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ + S + +R +RL+VIDS+AALFRS+F LK R F L +++
Sbjct: 193 CITRRLSLLL----ARGMVRLVVIDSMAALFRSEFGPAEAALKARYLQTF--GAQLHSLS 246
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSS-GRPICPALGIAWANCVNSRLFL 240
F ++ NQV D + +E C + + G + PALGI W+N + RL +
Sbjct: 247 TRFRTPIVCINQVTDAVSESEAAQ--------CSWRAVGSRVTPALGITWSNQLLMRLMV 298
Query: 241 SRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
R + G G+ S C + R+L VVFAPHL + C + + EGV G
Sbjct: 299 RRVS---------LPGHSPGAASH---CAGSTRTLSVVFAPHLPPSFCYYTVQLEGVKGT 346
Query: 301 E 301
+
Sbjct: 347 K 347
>gi|440898955|gb|ELR50346.1| DNA repair protein XRCC3 [Bos grunniens mutus]
Length = 340
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 140/297 (47%), Gaps = 47/297 (15%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P + ITEL S +GKTQ LQL L+ QLP HGGL A
Sbjct: 75 PEQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQLPPRHGGLGA 134
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDY---------IFVQSVHSVDQLLD-IM 123
++Y+ TE FP RL QL + P IF++ VD LL +
Sbjct: 135 GAVYVCTEDAFPSHRLQQLIAQQQRLRADVPGHVISKIRFGHQIFIEHAADVDTLLQCVK 194
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
K+ + +R RL+VIDS+AA FR +FD L+ + L + L+ ++
Sbjct: 195 EKVPVLL-----ARGMARLVVIDSVAAPFRCEFDGAALALRAQRLL--ALGAELRRLSCA 247
Query: 184 FGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRN 243
F VL NQV + +E + V G G + PALGI WAN + RL R
Sbjct: 248 FRSPVLCVNQVTEAVEEQDLVAG----------PPG--MSPALGITWANQLLVRLLADRQ 295
Query: 244 EDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
E+ R+L VVFAPHL +SC + I EGV G+
Sbjct: 296 R------------------PEEVPLTPPGRTLRVVFAPHLPASSCSYTIAAEGVRGM 334
>gi|301766940|ref|XP_002918902.1| PREDICTED: DNA repair protein XRCC3-like [Ailuropoda melanoleuca]
Length = 349
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/295 (34%), Positives = 143/295 (48%), Gaps = 37/295 (12%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P + +TEL S +GKTQ LQL L+ Q P HGGL A
Sbjct: 76 PAQHQRLSLGCPVLDGLLRGGLPLDGLTELAGHSSTGKTQLALQLCLTVQFPRQHGGLGA 135
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCD---------YIFVQSVHSVDQLLDIMP 124
++Y+ TE FP RL QL R P D IF++ V VD LL+ +
Sbjct: 136 GAVYICTEDVFPNLRLQQLIAQQRHLRTDVPGDVVDRIKFGNQIFIKHVADVDTLLECVS 195
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K + SR RL+VIDS+AA FR +FD + R + L+ ++ F
Sbjct: 196 KKVPVLL----SRGMARLVVIDSVAAPFRCEFDGPAAIPRARRLQ--ALGAALRRLSGSF 249
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
VL NQV + E + G + L+ + + PALG+ W+N + RL +SR
Sbjct: 250 RSPVLCINQVTEAAEEQDAAPGPQ-----GLWD--KRVSPALGMTWSNQLLMRLMVSRR- 301
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFG 299
R + V G R+L VVFAPHL +SC + I EGV G
Sbjct: 302 ----RAEEAVLTPPG----------HPTRTLEVVFAPHLPRSSCSYTIHAEGVRG 342
>gi|281354182|gb|EFB29766.1| hypothetical protein PANDA_007427 [Ailuropoda melanoleuca]
Length = 331
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/295 (34%), Positives = 143/295 (48%), Gaps = 37/295 (12%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D L GG+P + +TEL S +GKTQ LQL L+ Q P HGGL A
Sbjct: 58 PAQHQRLSLGCPVLDGLLRGGLPLDGLTELAGHSSTGKTQLALQLCLTVQFPRQHGGLGA 117
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCD---------YIFVQSVHSVDQLLDIMP 124
++Y+ TE FP RL QL R P D IF++ V VD LL+ +
Sbjct: 118 GAVYICTEDVFPNLRLQQLIAQQRHLRTDVPGDVVDRIKFGNQIFIKHVADVDTLLECVS 177
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K + SR RL+VIDS+AA FR +FD + R + L+ ++ F
Sbjct: 178 KKVPVLL----SRGMARLVVIDSVAAPFRCEFDGPAAIPRARRLQ--ALGAALRRLSGSF 231
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
VL NQV + E + G + L+ + + PALG+ W+N + RL +SR
Sbjct: 232 RSPVLCINQVTEAAEEQDAAPGPQ-----GLWD--KRVSPALGMTWSNQLLMRLMVSRR- 283
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFG 299
R + V G R+L VVFAPHL +SC + I EGV G
Sbjct: 284 ----RAEEAVLTPPG----------HPTRTLEVVFAPHLPRSSCSYTIHAEGVRG 324
>gi|57529909|ref|NP_001006489.1| DNA repair protein XRCC3 [Gallus gallus]
gi|53127776|emb|CAG31217.1| hypothetical protein RCJMB04_3f19 [Gallus gallus]
Length = 347
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 146/294 (49%), Gaps = 36/294 (12%)
Query: 18 EKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLY 77
+K ++GC ++D L GGIP ITEL ES +GKTQ LQL L Q P +GGL + ++Y
Sbjct: 80 QKLSLGCSVLDDLLKGGIPLVGITELAGESSAGKTQIGLQLCLCVQYPYRYGGLESGAVY 139
Query: 78 LHTEFPFPMRRLHQL---SHTFR---PSNDHNPCDY---IFVQSVHSVDQLLDIMPKIES 128
+ TE FP +RL QL H R P + IFV+ +D + + K S
Sbjct: 140 ICTEDAFPSKRLQQLIAQQHKLRADVPPEIIQKIRFGNSIFVEHAADLDTFHNCITKRLS 199
Query: 129 FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAV 188
+ +R +RL+VIDSIAALFR +F + LK R F L ++ F +
Sbjct: 200 LLL----TRGMVRLVVIDSIAALFRCEFGASDSVLKARYLQTF--GAQLHGLSTRFRTPI 253
Query: 189 LVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP-ICPALGIAWANCVNSRLFLSRNEDFV 247
+ NQV D + +E C YS+ + PALGI WAN + RL +SR
Sbjct: 254 MCINQVTDAVSESEAAQ--------CSYSTADSRVSPALGITWANQLLMRLMVSR----- 300
Query: 248 VRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
V + + G V + + R+L VVFAPHL + C F + EGV G++
Sbjct: 301 VPQPEPSPGAVSHHPA-------SMRTLRVVFAPHLPPSFCCFTVKLEGVKGMK 347
>gi|326921096|ref|XP_003206800.1| PREDICTED: DNA repair protein XRCC3-like [Meleagris gallopavo]
Length = 347
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 147/294 (50%), Gaps = 36/294 (12%)
Query: 18 EKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLY 77
+K ++GC ++D L GGIP ITEL ES +GKTQ LQL L Q P +GGL + ++Y
Sbjct: 80 QKLSLGCSVLDDLLKGGIPLVGITELAGESSAGKTQIGLQLCLCVQYPYRYGGLESGAVY 139
Query: 78 LHTEFPFPMRRLHQL---SHTFR---PSNDHNPCDY---IFVQSVHSVDQLLDIMPKIES 128
+ TE FP +RL QL H R P + IFV+ +D + + K S
Sbjct: 140 ICTEDAFPSKRLQQLIAQQHKLRADVPPEIIQKIRFGNSIFVEHAADLDTFHNCITKRLS 199
Query: 129 FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAV 188
+ +R +RL+VIDSIAALFR +F + LK R F L ++ F +
Sbjct: 200 LLL----TRGTVRLVVIDSIAALFRCEFGASDSVLKARYLQTF--GAQLHGLSTRFRTPI 253
Query: 189 LVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP-ICPALGIAWANCVNSRLFLSRNEDFV 247
+ NQV D + +E V C YS+ + PALGI WAN + RL +SR
Sbjct: 254 MCINQVTDAVSESEAVQ--------CGYSTADSRVFPALGITWANQLLMRLMVSR----- 300
Query: 248 VRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
V + + G V + + R+L VVFAPHL + C + + EGV G++
Sbjct: 301 VPQPEPTPGAVSHHPA-------SVRTLRVVFAPHLPPSFCCYTVRLEGVKGMK 347
>gi|345804171|ref|XP_003435154.1| PREDICTED: DNA repair protein XRCC3 [Canis lupus familiaris]
Length = 349
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 146/300 (48%), Gaps = 47/300 (15%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++DR L GG+P + +TEL S +GKTQ LQL L+ Q P HGGL A
Sbjct: 76 PARPQRLSLGCPVLDRLLRGGLPLDGVTELAGLSSAGKTQLALQLCLAVQFPPRHGGLDA 135
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNP---------CDYIFVQSVHSVDQLLD-IM 123
++Y+ TE FP RL QL + P + IF++ V VD LL+ +
Sbjct: 136 GAMYICTEDVFPNLRLQQLIAQQQRLRTDVPGEVVSRIKFSNQIFIEHVADVDSLLECVR 195
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
K+ + SR RL+VIDS+AA FR +FD L R+ + L+ ++
Sbjct: 196 EKVPVLL-----SRGMARLVVIDSVAAPFRCEFDGPA--LVPRARHLQALGAALRRLSCA 248
Query: 184 FGLAVLVTNQVVDLMEPNEGV----NGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLF 239
F VL NQV + E +G +GLR + PALG+ W+N + RL
Sbjct: 249 FQSPVLCINQVTEATE-EQGTAPRPHGLRDER----------VSPALGMTWSNQLLMRLM 297
Query: 240 LSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFG 299
+ R + V +G D R+L VVFAPHL +SC + + EGV G
Sbjct: 298 VHRRRPG--------DEAVTPAGPPD-------RTLSVVFAPHLPPSSCSYTVNAEGVRG 342
>gi|395504462|ref|XP_003756568.1| PREDICTED: DNA repair protein XRCC3 [Sarcophilus harrisii]
Length = 346
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 145/297 (48%), Gaps = 35/297 (11%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P+ +K GC I++R L GG+P I+ELV +S +GKTQ LQL+L Q P +GGL +
Sbjct: 76 PVQHKKLGFGCSILNRLLRGGLPLVGISELVGQSSAGKTQIGLQLSLCVQYPYEYGGLES 135
Query: 74 SSLYLHTEFPFPMRRLHQ---LSHTFR---PSNDHNPCDY---IFVQSVHSVDQLLDIMP 124
+Y+ TE FP +RL Q L H R P + IF++ V +D L + +
Sbjct: 136 GVIYICTEDVFPDKRLQQLIALQHQLRTDVPGEIIKKIKFGNSIFIEHVADIDTLFECIA 195
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K + SR +RLI+IDSIAALFR +F + K +L + L ++ GF
Sbjct: 196 KRAPILL----SRGMVRLIIIDSIAALFRCEF-GIQQSITKAKYL-QTLGAKLYQLSSGF 249
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
VL NQ+ ++ GL N+ L + PALGI W+N + RL +SR
Sbjct: 250 QSPVLCINQITSTVDE----RGLAGTNMDVL----EKVSPALGITWSNQLLMRLMVSRPS 301
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
R+ G R+L V+FAPHL + C + + EGV G+E
Sbjct: 302 YEFSRDTDASTTGT------------VIRTLSVIFAPHLPQSCCHYIVNAEGVKGIE 346
>gi|270008164|gb|EFA04612.1| spindle B [Tribolium castaneum]
Length = 274
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 141/286 (49%), Gaps = 60/286 (20%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC ID GGI N I+E+V +G GKTQ CLQL+L AQLP S GGL S +YL
Sbjct: 38 RISTGCSAIDAITRGGIAVNRISEIVGYAGVGKTQLCLQLSLMAQLPISLGGLGKSVVYL 97
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDH---NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSN 135
TE FP++RL L+ T+ N D IF++ + V+QL + + NS
Sbjct: 98 CTEDAFPIKRLKDLAITYSLKYHDLGINFEDNIFIEHLADVEQL-------KKCLSNSLT 150
Query: 136 SRLPIR---LIVIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVT 191
L ++ L+VIDSIA +FRS+ T+D + K R+ F I +L +A +G AV+
Sbjct: 151 KLLLVKNVGLVVIDSIAGIFRSE---TLDVNYKNRNQDFILIVTLLNKLAKKYGFAVVCV 207
Query: 192 NQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVREN 251
NQV D P V P LG+AW+NC+ R ++R + VRE
Sbjct: 208 NQVTD--NPTTNVTE-----------------PCLGLAWSNCLTYRFNINRFVNTKVRE- 247
Query: 252 QMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
VVFAP L++ +C+F IT EG+
Sbjct: 248 -----------------------FEVVFAPDLSNQTCKFTITGEGL 270
>gi|149044063|gb|EDL97445.1| rCG27697 [Rattus norvegicus]
Length = 345
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 145/296 (48%), Gaps = 41/296 (13%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D+ LGGG+P IT L S +GKTQ LQL L+ Q P +GGL A
Sbjct: 76 PEQHQRLSLGCPVLDQFLGGGLPLEGITGLAGRSSAGKTQLALQLCLAVQFPRQYGGLEA 135
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCD---------YIFVQSVHSVDQLLDIMP 124
++Y+ TE FP +RL QL + P + +IF++ VD L++ +
Sbjct: 136 GAVYICTEDAFPSKRLWQLIEQLQELRTDVPGEVTQKIRFGNHIFIEHAADVDTLMECVS 195
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K + SR RL+V+DSIAA FR +F ++ + + L+ ++ F
Sbjct: 196 KRVPILL----SRGMARLVVVDSIAAPFRCEFHLQASAVRAKH--LHSLGAALQRLSSTF 249
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
VL NQV +++E E + PALGI WAN + +L + R
Sbjct: 250 RSPVLCINQVTEMVEDQESAGAWE-----------ERLSPALGITWANQLLMQLMVDR-- 296
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
+ E+ + G + R R+L V+FAPHL +SC + ++ EGV G+
Sbjct: 297 ---IHEDSVTTG----------LPRSPARTLRVLFAPHLPLSSCCYTVSGEGVRGM 339
>gi|189237371|ref|XP_971150.2| PREDICTED: similar to GA17378-PA [Tribolium castaneum]
Length = 272
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 141/286 (49%), Gaps = 60/286 (20%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC ID GGI N I+E+V +G GKTQ CLQL+L AQLP S GGL S +YL
Sbjct: 36 RISTGCSAIDAITRGGIAVNRISEIVGYAGVGKTQLCLQLSLMAQLPISLGGLGKSVVYL 95
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDH---NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSN 135
TE FP++RL L+ T+ N D IF++ + V+QL + + NS
Sbjct: 96 CTEDAFPIKRLKDLAITYSLKYHDLGINFEDNIFIEHLADVEQL-------KKCLSNSLT 148
Query: 136 SRLPIR---LIVIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVT 191
L ++ L+VIDSIA +FRS+ T+D + K R+ F I +L +A +G AV+
Sbjct: 149 KLLLVKNVGLVVIDSIAGIFRSE---TLDVNYKNRNQDFILIVTLLNKLAKKYGFAVVCV 205
Query: 192 NQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVREN 251
NQV D P V P LG+AW+NC+ R ++R + VRE
Sbjct: 206 NQVTD--NPTTNVTE-----------------PCLGLAWSNCLTYRFNINRFVNTKVRE- 245
Query: 252 QMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
VVFAP L++ +C+F IT EG+
Sbjct: 246 -----------------------FEVVFAPDLSNQTCKFTITGEGL 268
>gi|308802163|ref|XP_003078395.1| Rad51B protein (ISS) [Ostreococcus tauri]
gi|116056847|emb|CAL53136.1| Rad51B protein (ISS) [Ostreococcus tauri]
Length = 618
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/301 (35%), Positives = 155/301 (51%), Gaps = 28/301 (9%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
M P N T C ID L GG+ ITE+ ESG+GKT C QL L AQL
Sbjct: 320 MRPPNATAASATCSIARTRCDAIDAALRGGVRTRQITEVCGESGTGKTHLCAQLALFAQL 379
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFR-------PSNDHNPCDYIF-VQSVHSV 116
L S++Y+HTE P + +++ T R + + ++ V+S+
Sbjct: 380 -----DLGGSTVYVHTEGRAPTDVMRRMTTTRRFVEAFGGDARARGALERVYAVKSLGDA 434
Query: 117 DQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGM 176
D L + + + + +++ + R P+RLIV+DS A FR +R+ K++ +
Sbjct: 435 DGLRETLEGVSAVLRSPIDVRAPVRLIVVDSATAPFRDADGGGATYAARRAGTLHKMTML 494
Query: 177 LKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNS 236
LK A LAV+VTN VVD+++ E V GL +G L +SGR PALG+ WANCVN+
Sbjct: 495 LKEYASVHDLAVVVTNHVVDVVQAGECVGGLGRAFMG-LDTSGRRAQPALGLMWANCVNT 553
Query: 237 RLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREG 296
RLFL+R+ D R + GGV RR LHVV+APHL + + +F ++ +G
Sbjct: 554 RLFLTRH-DARGRGAVVACGGV-------------RRRLHVVYAPHLREATVDFVLSDDG 599
Query: 297 V 297
V
Sbjct: 600 V 600
>gi|62859281|ref|NP_001016141.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [Xenopus (Silurana) tropicalis]
gi|110645694|gb|AAI18906.1| xrcc3 protein [Xenopus (Silurana) tropicalis]
Length = 348
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 151/298 (50%), Gaps = 40/298 (13%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P +K ++GC ++D L GG+P ITE+ ES +GKTQ LQL LS Q P +GGL++
Sbjct: 76 PAQHQKLSLGCKVLDNFLRGGVPLVGITEIAGESSAGKTQIGLQLCLSVQYPVEYGGLAS 135
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPC---------DYIFVQSVHSVDQLLD-IM 123
++Y+ TE FP +RL QL + P D IFV+ VD L + I
Sbjct: 136 GAVYICTEDAFPSKRLQQLIKSQHKLRSDVPTEVIKNIRFGDSIFVEHTADVDTLTECIT 195
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
K+ + S IRL++IDSIAALFR +F +K + + L +M+
Sbjct: 196 KKVPVLLLRGS-----IRLVIIDSIAALFRCEFAAKDAAIKAKHLQ--TLGAKLHSMSNR 248
Query: 184 FGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRN 243
F VL NQV D + +N ++ +LG + + PALGI+W+N + R+ ++R
Sbjct: 249 FLTPVLCINQVTDRVRE---MNSEQI-DLGL---QDKKVVPALGISWSNQLLMRVMVART 301
Query: 244 EDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+ E+ GG+ R++ VVFAPH+ +SC + + EGV G++
Sbjct: 302 QHMAPAEH---AGGI-------------LRTMEVVFAPHIPQSSCYYTVDLEGVKGLD 343
>gi|66810419|ref|XP_638929.1| AAA ATPase domain-containing protein [Dictyostelium discoideum AX4]
gi|60467564|gb|EAL65585.1| AAA ATPase domain-containing protein [Dictyostelium discoideum AX4]
Length = 564
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 124/223 (55%), Gaps = 35/223 (15%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT L +++ K + GC I+D+CLGGGI ITE+ ESGSGKTQ C+QL+L QL
Sbjct: 152 MTSLELEKLQISSIKLSTGCKIMDKCLGGGISPIGITEIAGESGSGKTQLCIQLSLQVQL 211
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQL----------------------------SHTF 96
P GGL+ + LY+ TE PFP +RL+Q+ +
Sbjct: 212 PFEMGGLNGACLYITTEPPFPTKRLNQMYTVKSGKNTNNNTNNNNNNNNGQQQQQQQYYS 271
Query: 97 RPSNDH-NPCDYIFVQSVHSVDQLLDIM-PKIESFIKNSSNSRLPIRLIVIDSIAALFRS 154
+ SN +P D IF+QS ++D L+D++ +I +++ + IRL++IDSIAAL R
Sbjct: 272 KLSNSGVSPLDNIFIQSTTTIDSLMDLLINQITGYLEKKT-----IRLLIIDSIAALLRH 326
Query: 155 DFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDL 197
++ N ++ +++ L + ++ LK + +G+ ++V NQV D
Sbjct: 327 EYGNEKSEIIEKTKLLWSLANRLKLINEQYGITIVVVNQVTDF 369
>gi|449280658|gb|EMC87894.1| DNA repair protein XRCC3 [Columba livia]
Length = 347
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 149/299 (49%), Gaps = 46/299 (15%)
Query: 18 EKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLY 77
+K ++GC ++D L GGIP ITEL ES +GKTQ LQL L Q P +GGL + ++Y
Sbjct: 80 QKLSLGCSVLDALLKGGIPLVGITELAGESSAGKTQIGLQLCLCVQYPYKYGGLESGAVY 139
Query: 78 LHTEFPFPMRRLHQL---SHTFR---PSNDHNPCDY---IFVQSVHSVDQLLDIMPKIES 128
+ TE FP +RL QL H R P+ + IFV+ H+ D +E+
Sbjct: 140 ICTEDVFPSKRLQQLIDQQHKLRADVPAEIIQKIKFGNGIFVE--HAAD--------LET 189
Query: 129 FIKNSSN------SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAV 182
F +N +R +RL+VIDSIAALFR +F + K R F L ++++
Sbjct: 190 FHNCITNRISLLLARGMVRLVVIDSIAALFRCEFGASDSVTKARYLQTF--GAQLHSLSM 247
Query: 183 GFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
F ++ NQV D + +E GC R + PALGI WAN + RL ++R
Sbjct: 248 RFRTPIMCINQVTDAVSESEA------AQCGCSAVDNR-VSPALGITWANQLLMRLMVNR 300
Query: 243 NEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+ + +V+ G + R+L VVFAPHL + C + + EGV G++
Sbjct: 301 LSP-PEQSSALVSHHSG-----------SVRTLRVVFAPHLPPSFCYYTVKLEGVKGIK 347
>gi|241690305|ref|XP_002411756.1| DNA repair protein RAD51/RHP55, putative [Ixodes scapularis]
gi|215504591|gb|EEC14085.1| DNA repair protein RAD51/RHP55, putative [Ixodes scapularis]
Length = 354
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 151/301 (50%), Gaps = 35/301 (11%)
Query: 3 APMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSA 62
+P T LD+ +T + GCPI+DR LGGG+P +TEL ESGSGKTQFCLQL+L A
Sbjct: 73 SPFTSLYDLDSGQST--LSFGCPILDRFLGGGLPTRGVTELSGESGSGKTQFCLQLSLMA 130
Query: 63 QLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDI 122
Q S G+ +Y+ TE FP RRL Q+ P+ + D + V V + L+
Sbjct: 131 Q-RSLGDGMPIYVVYICTEDRFPDRRLRQMQRELGPAG-RSLSDNVLVSHVGELAMLMTC 188
Query: 123 MPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAV 182
+ ++ + + L+V+DS+AALFRS+++ D +R+ K+ +L +
Sbjct: 189 LETTLPSLRRTKR----VGLLVLDSVAALFRSEYEQ--DQGIQRAADLRKLGTVLDRIWR 242
Query: 183 GFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
G+AVL NQV DL+ + + + +G P+LG+ W N V +RLF+S+
Sbjct: 243 S-GVAVLCVNQVTDLISSDHPMFPV----------TGASCVPSLGLTWGNVVTTRLFVSK 291
Query: 243 NEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLAD--TSCEFEITREGVFGV 300
+ G S + RR L VV +P L C + +T+ GV G+
Sbjct: 292 TA--------LTYAGARNSAEPEVNVRR----LQVVCSPSLPHRPEGCLYVVTQRGVQGI 339
Query: 301 E 301
E
Sbjct: 340 E 340
>gi|442535548|gb|AGC52847.1| XRCC3, partial [Hypsibius dujardini]
Length = 374
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 149/295 (50%), Gaps = 46/295 (15%)
Query: 17 TEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSL 76
T + T GCP++D+ GGI + +TE +G+ KTQ CL L L AQLP GGL L
Sbjct: 108 TIRLTFGCPLLDKLFRGGIVVDHLTEFAGAAGTAKTQTCLFLALRAQLPVLSGGLGGEVL 167
Query: 77 YLHTEFPFPMRRLHQLSH------TFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFI 130
YL TE P+RRL Q++ T S D IF++++ ++D+ +E F+
Sbjct: 168 YLCTE-TVPIRRLRQMTDEMVRNLTAAKSEVTPSMDRIFIENLVTLDE-------VEHFL 219
Query: 131 KNSSN---SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLA 187
+ +RLPI+L+++DS+A++FR + ++ + +RS +++ +L+ + + +A
Sbjct: 220 SGRVHDLLTRLPIKLVIVDSMASVFRYQEEEKVNSM-ERSARLQRMTVILRRLQAKYNVA 278
Query: 188 VLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL--SRNED 245
++ TNQ +++ + L G PALG++W+N V +R+ L +R ED
Sbjct: 279 LICTNQATTMIDDAASSDTLGDGV--------DRTAPALGLSWSNFVTTRVMLHKTRMED 330
Query: 246 FVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
D +R + VVFAPHL T +FE+ G+ GV
Sbjct: 331 ------------------PDTGLAVVKRRMKVVFAPHLPQTQVKFEVGMGGLRGV 367
>gi|301101197|ref|XP_002899687.1| DNA repair protein XRCC3 [Phytophthora infestans T30-4]
gi|262102689|gb|EEY60741.1| DNA repair protein XRCC3 [Phytophthora infestans T30-4]
Length = 277
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 146/295 (49%), Gaps = 63/295 (21%)
Query: 23 GCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEF 82
GC ID L GG +TE+ E+ +GKTQ CLQL L LP S GGL ++ Y+ TE
Sbjct: 20 GCDSIDELLHGGFRSGILTEICGEASAGKTQLCLQLLLQCCLPRSLGGLQGTACYICTEG 79
Query: 83 PFPMRRLHQLSHTF-------------RPSNDHNP-------CDYIFVQSVHSVDQLLDI 122
++RLH L+ + R + P D IFV+ +++VD L+D+
Sbjct: 80 VGSVKRLHDLAQVYAKRYGGVMGIGAKRKRGEAVPKLSGSDFLDGIFVEQLYTVDDLMDL 139
Query: 123 MPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAV 182
+ + N+ +L+V+DS+AA+FR + +++ + +RS F ++ ++ ++
Sbjct: 140 VQARLPMLLAEQNT----KLVVLDSVAAVFRLESTSSVKEAAERSRTMFHMANCMRILSD 195
Query: 183 GFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+G+ +VTNQV +P NGLR PALG++W++C+N RL ++R
Sbjct: 196 QYGVVFVVTNQVTGDFDPRSNGNGLR---------------PALGLSWSHCINQRLMITR 240
Query: 243 NEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
++D TRR L V F+PHL +C F++T EGV
Sbjct: 241 HKD------------------------STRRRLDVAFSPHLPAETCAFQVTNEGV 271
>gi|145344501|ref|XP_001416770.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576996|gb|ABO95063.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 307
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 153/298 (51%), Gaps = 40/298 (13%)
Query: 24 CPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFP 83
CP ID L GG+ +TE+ ES S KT C QL + A ++ GG +++Y+HT+ P
Sbjct: 20 CPRIDDALRGGVRARHVTEIAGESASAKTTLCAQLAVRA---TARGG---AAVYVHTDGP 73
Query: 84 FP---MRRLHQLSHTFRPSNDHN------PCDYIFV-QSVHSVDQLLDIMPKIESFIKNS 133
P MRR+ + + D + + ++V +++ D L + + + + ++
Sbjct: 74 APTALMRRIASSARFVAEACDGDEDAATAALERVYVVKALGDADALRETLTAVSAVLRAP 133
Query: 134 SNSRLPIRLIVIDSIAALFRSDFDNT-MDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTN 192
+ +R+IV+DSIAA FR D N KR+ K++ +LK A +AV+VTN
Sbjct: 134 VSEDAVVRMIVVDSIAAPFRDDATNGGWTYAAKRAGALHKLTMLLKEYATKHDVAVVVTN 193
Query: 193 QVVDLMEPN----EGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRN----E 244
VVD + N G + +G +SGR + PALG+ W+NCVN+RLFL+R +
Sbjct: 194 HVVDSVRENGTGAHGDGAVATRAMGEFTTSGRRVVPALGLMWSNCVNARLFLTRRATRGQ 253
Query: 245 DFVV--RENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
+VV + N GV R+LHVV+APHL ++S +F + +G + V
Sbjct: 254 GYVVGGDDGDDGNAGVA-------------RTLHVVYAPHLPESSVDFVVREDGAWDV 298
>gi|340375202|ref|XP_003386125.1| PREDICTED: DNA repair protein XRCC3-like [Amphimedon queenslandica]
Length = 335
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 149/307 (48%), Gaps = 52/307 (16%)
Query: 4 PMTPQNL--LDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
P+T Q++ +DN +K ++GCP+ID L GG+ S+TE+ S +GK+Q CLQL+L+
Sbjct: 61 PLTAQDIRQIDN----QKLSLGCPLIDETLQGGLLPRSLTEVAGTSAAGKSQLCLQLSLT 116
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSH----TFRPSNDHNPCDYIFVQSVHSVD 117
QL HGG S+ ++Y+ TE PF +RL +L+ + N D + V +V
Sbjct: 117 VQLREKHGGYSSKAVYISTEGPFHSKRLKELAQFMAGKYSYLNAQTLMDNVLVHHSATV- 175
Query: 118 QLLDIMPKIE---SFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKIS 174
Q L ++ E KN N IRLI+IDS+A+LFR ++ + DD R++ I+
Sbjct: 176 QELKVLLNHELPCLLQKNPRN----IRLIIIDSLASLFRVEY--SYDD-SSRAYDLKLIA 228
Query: 175 GMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCV 234
L + L ++ TNQ M + N R PALG W+N V
Sbjct: 229 SSLHLLIYQHQLTIVCTNQ----MTSDTKSNTTR---------------PALGELWSNMV 269
Query: 235 NSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITR 294
+RL L R E V N GV R L + FAPHL + + + I
Sbjct: 270 ATRLLLLREEG--VDNNAAFCPGVNP----------VPRLLQIDFAPHLPNNTMNYYIDD 317
Query: 295 EGVFGVE 301
EGV G++
Sbjct: 318 EGVHGLD 324
>gi|291225163|ref|XP_002732570.1| PREDICTED: X-ray repair complementing defective repair in Chinese
hamster cells 3-like [Saccoglossus kowalevskii]
Length = 383
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 139/301 (46%), Gaps = 53/301 (17%)
Query: 15 LTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSAS 74
L GC ++D L GGI ITE+ ES +GKTQ C+QL L+ QLP GGL+
Sbjct: 76 LKVRYVKTGCEVLDDFLRGGILSQGITEIAGESAAGKTQLCMQLCLTVQLPCHMGGLAGG 135
Query: 75 SLYLHTEFPFPMRRLHQLSHTFR----PSNDHNPC--DYIFVQSVHSVDQLLDIMPKIES 128
++Y+ TE FP +RLHQ+ F P + D+IFV+ H+ DQ ES
Sbjct: 136 AVYICTEDVFPSKRLHQMIKYFNRKLGPELEMQLAVGDHIFVE--HASDQ--------ES 185
Query: 129 FIKNSSNSRLP-------IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
K N R+P ++ IVIDSIAALFR ++D + KR+ L+ +
Sbjct: 186 LWK-CINQRVPVLLARGMVKFIVIDSIAALFRGEYD--FSEAAKRAHHLRSFGDQLRKLN 242
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGR-PICPALGIAWANCVNSRLFL 240
+ V+ NQV M+ + GR PALG++W+N V RL L
Sbjct: 243 QQYNAPVVCVNQVSANMKGDS--------------EYGRYEFIPALGLSWSNLVTCRLLL 288
Query: 241 SRNEDFV-VRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFG 299
SR + + + N V R++ +FAPHL C + + +GV G
Sbjct: 289 SRTSMTIDINDPDTGNNAVAKV-----------RTMEAMFAPHLPRDLCYYVVDAKGVHG 337
Query: 300 V 300
+
Sbjct: 338 L 338
>gi|302828380|ref|XP_002945757.1| DNA repair protein (X-ray repair) [Volvox carteri f. nagariensis]
gi|300268572|gb|EFJ52752.1| DNA repair protein (X-ray repair) [Volvox carteri f. nagariensis]
Length = 345
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 159/344 (46%), Gaps = 92/344 (26%)
Query: 16 TTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASS 75
T K T+GC +ID L G ES +GKTQ LQ L+ QLP S GGL+ +
Sbjct: 11 TVLKTTLGCSVIDGFLRG------------ESTAGKTQLVLQSLLTVQLPQSEGGLNGKA 58
Query: 76 LYLHTEFPFPMRRLHQ-LSHTFRPSNDHNPCDYIFVQ-SVHSVDQLLDIMPKIESFIKNS 133
+Y++TE P+ RL L++ F+ D + + + + + + + LL + ++E+ ++
Sbjct: 59 VYIYTEGKPPVERLQAILANRFQGRPDVSLANVLIEERPIATPEDLLRSVRQLEALLERE 118
Query: 134 S--------------------NSRLPIRLIVIDSIAALFRSDFDN---TMDDLKKRSFLF 170
+ R +RL+VIDS+A +FR + + L++R+
Sbjct: 119 AAVPPLPPPHLTSGGGAAGASGGRRVVRLLVIDSVARVFRDVAEGDEPQVQQLQRRATQL 178
Query: 171 FKISGMLKAMAVGFGLAVLVTNQVVD---------------------------LMEPNEG 203
F ++ +LK +A LAVL+TNQV+D L G
Sbjct: 179 FGLATLLKRLAQQHQLAVLLTNQVMDDFNDSDSQAVTSRPFLQLMCGLDLTYILYWGPHG 238
Query: 204 VNGLRVGNLGC-------LYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNG 256
V G + + L SSGR + PALG+AWANCVN RLF +R++ + NG
Sbjct: 239 VRGPPIWQVTAPGSRAAPLLSSGRRVLPALGLAWANCVNCRLFAARHDSW--------NG 290
Query: 257 GVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
V RSL VVFAP+L + C F + +GV+G+
Sbjct: 291 VV-------------VRSLQVVFAPYLPHSYCCFRVDHQGVWGL 321
>gi|328724498|ref|XP_001942729.2| PREDICTED: DNA repair protein XRCC3-like [Acyrthosiphon pisum]
Length = 330
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 137/289 (47%), Gaps = 60/289 (20%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T GC ID+ LGGG+ ITE+ ESG GKTQFCLQ+ L+ QLP S G + + Y+ T
Sbjct: 89 TTGCKQIDKLLGGGLFKYGITEISGESGCGKTQFCLQIALTVQLPLSLKGAKSGAAYICT 148
Query: 81 EFPFPMRRLHQLSHTFR---------PSNDHNPCDY---IFVQSVHSVDQLLDIMPKIES 128
E FP R+ Q+ R N+ DY I + + +V+ D+ I
Sbjct: 149 EDRFPSSRIQQMISNIRFKYQCDSKIDMNELCQTDYGDNILISHIATVE---DLKKCIHE 205
Query: 129 FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAV 188
+ R PI+LIVIDSI A+FR ++ T ++ +RS I+ L ++V GL +
Sbjct: 206 MLPRVLLHR-PIKLIVIDSITAVFRGEY--TPSEVPRRSRDLRDIAVFLHKLSVEHGLWI 262
Query: 189 LVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVV 248
+ NQV + ++G G + P+LG+AWAN V +RL +S+
Sbjct: 263 ICVNQVTS-----------SISDIG-----GNKLVPSLGLAWANLVTTRLMMSKTH---- 302
Query: 249 RENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ R + V+F+PH A T+ F +T +G+
Sbjct: 303 ----------------------SSRYIEVMFSPHTAPTTIPFRVTEQGI 329
>gi|195055951|ref|XP_001994876.1| GH17480 [Drosophila grimshawi]
gi|193892639|gb|EDV91505.1| GH17480 [Drosophila grimshawi]
Length = 349
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 143/307 (46%), Gaps = 51/307 (16%)
Query: 4 PMTPQNLLDNP--LTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
P + L P L + T GC +D C GGGI ITE+ SG GK+Q LQL++S
Sbjct: 70 PTSADALFKIPARLKWSRLTFGCSSLDECTGGGISIRGITEICGASGVGKSQILLQLSIS 129
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQ 118
QLP GGL ++ TE FP RRL Q+S F P N IF++ +
Sbjct: 130 VQLPPRLGGLGKGVAFICTEDVFPSRRLLQISKAFEARYPEEQLNFLGNIFIEHQYESQP 189
Query: 119 LLD-IMPKIESFIKNSSNSRLPIRLIVIDSIAALFR--SDFDNTMDDLKKRSFLFFKISG 175
LLD + ++ ++ S I LI+IDS+AA+FR +DFD+ D++ ++
Sbjct: 190 LLDCVKNRLSQLLQEHS-----IGLIIIDSVAAIFRLYTDFDDRARDMR-------RMVH 237
Query: 176 MLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVN 235
L + A +G AV+ TNQ+ + + N L+ P LG+ W+N
Sbjct: 238 ALLSYADKYGCAVVCTNQMTASGQADH--NALQD-------------VPCLGLQWSNLGR 282
Query: 236 SRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITRE 295
+R+ +SR + +Q++ T R + ++++P + EF IT E
Sbjct: 283 TRIRISRVPKQYKQGDQLI----------------TVRKMEILYSPETPNAFAEFLITTE 326
Query: 296 GVFGVER 302
GV V R
Sbjct: 327 GVVNVPR 333
>gi|409082637|gb|EKM82995.1| hypothetical protein AGABI1DRAFT_125473 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 475
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 152/311 (48%), Gaps = 30/311 (9%)
Query: 17 TEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSL 76
TE ++G P++D L GG+ I E+V ES +GKTQF LQL+L QL SS GGL ++
Sbjct: 79 TEHLSLGDPVLDDTLSGGLRTGMIWEIVGESAAGKTQFALQLSLHVQLHSSQGGLGGAAC 138
Query: 77 YLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK-IESFIKNSSN 135
YL T RL Q+ R +D + D + S +V LL+++ K + +FI+ S
Sbjct: 139 YLTTSTKLQTSRLLQIKQ-MRNLSDASLED-VHTISTPTVHVLLNVLDKQLPTFIETISQ 196
Query: 136 S--RLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQ 193
+ R P++L+VID++A LF T L +RS +IS +L + + +V N+
Sbjct: 197 TVARKPVKLVVIDALAELFHVANKVTTASLVERSQQLTRISALLHQLVQRHNIVTVVLNE 256
Query: 194 VVDLMEPN-----EGVNGLRVG-------NLGC-LYSSGRPICPALGIAWANCVNSRLFL 240
V+D + N + NGL V N G +Y R +LG+ WAN VN+R+ L
Sbjct: 257 VLDAFDYNTPDSGKNENGLLVYSEQAKWFNRGYGVYGEDRKEA-SLGLVWANQVNARVML 315
Query: 241 SRNEDFVVRENQMVNGGVGGSGSEDFVCRRTR-----------RSLHVVFAPHLADTSCE 289
SR E + G ++ R++ R + V+F + SC+
Sbjct: 316 SRTGRRRYIEEEAEGEGDKRQKVQNEETSRSKNATSDGEPLLIRRMTVIFNSAGSRKSCD 375
Query: 290 FEITREGVFGV 300
+ +T GV G+
Sbjct: 376 YIVTASGVKGL 386
>gi|332376244|gb|AEE63262.1| unknown [Dendroctonus ponderosae]
Length = 257
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 136/303 (44%), Gaps = 59/303 (19%)
Query: 5 MTPQNLLDNPLTTEK-------CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQ 57
+ + LL N T K ++GC +D L GGIP N I EL SG GKTQ CLQ
Sbjct: 3 IASEKLLQNKFCTAKQIEPCHRISIGCTNLDGLLNGGIPVNGINELYGCSGVGKTQLCLQ 62
Query: 58 LTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPC--DYIFVQSVHS 115
L L QLP GG +Y+ TE FP +RL QL+ FR + + C D I+++ + +
Sbjct: 63 LALQIQLPVHLGGKGQEVVYICTEDVFPSKRLIQLACAFRSKYNVDICFEDRIYIEHIPN 122
Query: 116 VDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISG 175
+L + + F+ + LI+IDSIA LFRSD +N + RS F +
Sbjct: 123 FVRLQKCLNLLPQFLLGKK-----VGLIIIDSIAGLFRSDTENP--NYVARSQEFTVLGK 175
Query: 176 MLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVN 235
+L + +L NQVVD NL SSG P+LG++WAN V
Sbjct: 176 VLIELQEKCKFGILTINQVVD--------------NL----SSGLTE-PSLGLSWANNVT 216
Query: 236 SRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITRE 295
SR LSRN +R V+F+P LA + IT E
Sbjct: 217 SRFGLSRNNTDPIRR------------------------FDVIFSPDLAPSFSNLLITPE 252
Query: 296 GVF 298
G+
Sbjct: 253 GIL 255
>gi|281201100|gb|EFA75314.1| AAA ATPase domain-containing protein [Polysphondylium pallidum
PN500]
Length = 993
Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats.
Identities = 75/207 (36%), Positives = 110/207 (53%), Gaps = 25/207 (12%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P++ + + G ++DR L GGI + ITE+V ESG GKTQ +QL + AQLP S GG+
Sbjct: 599 PISKIRLSTGSNVLDRHLQGGIMPSGITEIVGESGCGKTQLAIQLCIQAQLPFSLGGMEG 658
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDH-----------------NPCDYIFVQSVHSV 116
++Y+ TE FP +RL Q+ RP + D I + V +
Sbjct: 659 GAVYIVTESNFPHKRLSQMIGKRRPIIEKLLQRNSENNNSSNSLNIQFEDNIIIHKVPTA 718
Query: 117 DQLLDIMPK--IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKIS 174
QLL ++ + E K + IRL+V+DSIAAL RS+F DL +R+ L ++IS
Sbjct: 719 QQLLTVLTQQFAELIFKRT------IRLLVVDSIAALVRSEFGTESKDLIERTNLLWEIS 772
Query: 175 GMLKAMAVGFGLAVLVTNQVVDLMEPN 201
LK ++ G+ V+V NQV D + N
Sbjct: 773 NQLKLISEEHGITVVVINQVTDYFDSN 799
>gi|170290825|ref|YP_001737641.1| DNA repair and recombination protein RadA [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174905|gb|ACB07958.1| DNA repair and recombination protein RadA [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 336
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 137/293 (46%), Gaps = 48/293 (16%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
M+ + ++ T G +D LGGG+ SITE+ GSGKTQFC Q+ ++ QL
Sbjct: 89 MSAYDFYQQRKAVQRITTGSKALDELLGGGVETQSITEIYGPYGSGKTQFCHQMAVTVQL 148
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMP 124
GGL ++Y+ TE F R+ Q++ F+ +H + ++ ++ S Q++ +
Sbjct: 149 DEEKGGLGRGAMYIDTEGTFRPERILQIAERFKLDPEHTLKNILYARAFTSDHQMI-VTE 207
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
+ ES+IK I LI++DS+ + FR ++ + L +R K L +A+G+
Sbjct: 208 RAESYIKERD-----IGLIIVDSLISHFRGEYVG-RETLAERQQKLNKYLHKLLRLALGY 261
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
+AV+VTNQVV +P + G P PA G + V +RL++ R
Sbjct: 262 NMAVIVTNQVV--ADPT------------AFF--GDPNKPAGGHVLGHGVTARLYIKRG- 304
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
++ RR + +V +P+L + + E IT+ G+
Sbjct: 305 ------------------------KKDRRVIKLVKSPYLPEGTVEVAITQGGI 333
>gi|326426805|gb|EGD72375.1| hypothetical protein PTSG_00395 [Salpingoeca sp. ATCC 50818]
Length = 335
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 144/303 (47%), Gaps = 39/303 (12%)
Query: 4 PMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQ 63
P T +LL T + + G +DR G I + +L ES +GKTQ LQL L+ Q
Sbjct: 64 PSTAAHLLTTA-THDPISWGDAGLDRV--GPIRTGHLIDLCGESSAGKTQLALQLCLAVQ 120
Query: 64 LPSSHGGLSASSLYLHTEFPFPMRRLHQL----SHTFRPSNDHNPCDYIFVQSVHSVDQL 119
P GG+SA +++++TE FPM R HQL + + D +F +++ D+
Sbjct: 121 QPPECGGISARAVFINTEARFPMSRWHQLAKHCAQRYPSLASIAVSDNVFTNRINTADEF 180
Query: 120 LDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKA 179
+ + + +SS +RL+VIDSIAALFR+DF +D+ R+ + F I LK
Sbjct: 181 WMFVHEALPSLLSSSG----VRLVVIDSIAALFRADF--ALDESAARAHVLFDIGRQLKQ 234
Query: 180 MAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLF 239
+A A++ NQV + P E + ++ R I PALG+AW++C+N+R F
Sbjct: 235 LAHAHKTAIVCINQVSAHV-PEEVLPS---------FAPSRVI-PALGLAWSSCINARYF 283
Query: 240 LSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFG 299
+ R RE S C R L APHL + F + +G
Sbjct: 284 VRR---ITSRE-----------ASVQAAC-DVERQLSCALAPHLPEERASFFVDNDGCHS 328
Query: 300 VER 302
+E+
Sbjct: 329 MEQ 331
>gi|213402507|ref|XP_002172026.1| DNA repair and recombination protein radA [Schizosaccharomyces
japonicus yFS275]
gi|212000073|gb|EEB05733.1| DNA repair and recombination protein radA [Schizosaccharomyces
japonicus yFS275]
Length = 358
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 153/322 (47%), Gaps = 46/322 (14%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+ + PQ + + T T G ID+ L GGI + ITE+ ESGSGK+QFC+QL L
Sbjct: 57 LKKALLPQRITPDARETHFFTTGDTEIDKALHGGIALDHITEISGESGSGKSQFCIQLCL 116
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLL 120
+ QLP S GGL +++++ TE RRL QL+ ++ Y+ S H D++
Sbjct: 117 TVQLPKSVGGLDRAAVFISTESGLETRRLFQLAKFLSLQYPNDDLSYL---SRHPGDRVY 173
Query: 121 DIM-PKIESFIKNSSNSRLPIR-------LIVIDSIAALFRSDFD--------NTMDDLK 164
I+ P +ES ++ +LPI LIV+DS+AA +R++ +++ ++
Sbjct: 174 TILCPDLESQ-EHIIEYQLPILMQRVNIGLIVLDSVAANYRAELRYSRNHPNASSLGNIA 232
Query: 165 KRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGR---- 220
R K++ L+ +A AV++ NQV D + + GL + + +G
Sbjct: 233 TRGNQLAKLASNLRELAHKHNAAVVIANQVSDRVSRSYDQIGLFSLDYQSQWFNGWDDTD 292
Query: 221 --PICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVV 278
P P+LG+ W N V +RL L + R N R++ R L +V
Sbjct: 293 IDPKTPSLGLVWTNNVTTRLALLK------RPNS--------------ATRKSLRKLRIV 332
Query: 279 FAPHLADTSCEFEITREGVFGV 300
++P + + IT EG+ V
Sbjct: 333 YSPIAPTSEIDIAITLEGLHTV 354
>gi|390594260|gb|EIN03673.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 534
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 149/310 (48%), Gaps = 46/310 (14%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGGI + ++ ES +GKTQ LQL+L+ Q P GGLS SS Y+ T P
Sbjct: 89 LDALLGGGIQTGMMWDVSGESAAGKTQLALQLSLAVQFPPEMGGLSGSSCYITTRSRLPT 148
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQSVHS-----VDQLLDI-MPKIESFIKNSSNSRLPI 140
RL +++ P D N C + ++H+ + +LD+ +P+ + I + S +R P+
Sbjct: 149 TRLLEIAQNH-PRLDPNICGLADIHTLHTPTPPMLQHVLDVVLPRFVNQISDRSGAR-PV 206
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
RL+VID++ LF S+ T L +RS + +S L A+A GLA++V N+V D+ +
Sbjct: 207 RLVVIDTLTELFHSETRTTSHWLFERSKIISALSASLHALASQRGLAIVVLNEVTDVFD- 265
Query: 201 NEGVNGLRVGNLGCLYSS-----GRPIC--------PALGIAWANCVNSRLFLSR----- 242
+ + R LY GR LG+ W N VN+RL LSR
Sbjct: 266 RDDLPPSREAGADVLYREQSRWFGRANSMPGEDRKQADLGLVWTNQVNARLMLSRTGRRR 325
Query: 243 --NEDFV-VRENQMVNGGVGGSGS------------EDFVCRRTRRSLHVVFAPHLADTS 287
+ED V + + +NG S + E V RR L +VF+ S
Sbjct: 326 HLDEDEVRALKRRRLNGDDANSDTEPDDANSLLQDGEPTVIRR----LTIVFSAVARPGS 381
Query: 288 CEFEITREGV 297
++ +TR G+
Sbjct: 382 VDYVVTRGGI 391
>gi|393216597|gb|EJD02087.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 527
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 156/322 (48%), Gaps = 35/322 (10%)
Query: 8 QNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSS 67
+NLL+ + +K T G ++DR +GGGI + ELV ES SGKTQ LQL+L QL +
Sbjct: 70 RNLLEE-VGDDKFTTGDAVLDRVIGGGIRTGMVWELVGESASGKTQLALQLSLLVQLRPA 128
Query: 68 HGGLSASSLYLHTEFPFPMRRLHQ--LSHTFRPSNDHNPCDYIFVQSVHSVDQLL----D 121
GGLS S+ YL T P +RL+Q L+H + + D I S +++ LL +
Sbjct: 129 LGGLSGSACYLTTHAKLPTKRLNQLILNHPLLSPSLCSLSD-IHTVSAPTIEFLLHTLRN 187
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
P ++ ++ + R P+RLIVIDSI+ LF + ++ L +RS +++S ++ +A
Sbjct: 188 TFPALQDELRKDAK-RKPVRLIVIDSISTLFNTPEKSSSVTLFERSKALYELSNVMHTIA 246
Query: 182 VGFGLAVLVTNQVVDLME------PNEGVNGLRVGNLGCLYSSGRPICP-------ALGI 228
+A +V N+V D+ ++ G + + + P LG+
Sbjct: 247 ARDNIAFVVVNEVTDVFNDYYPAAQDDASKGDIIYRDQAKWFNSAHFIPRESTKEARLGL 306
Query: 229 AWANCVNSRLFLSR-------NEDFVVRENQMVNGG------VGGSGSEDFVCRRTRRSL 275
WAN VN+R+ L+R ++ + + Q +NGG + G ++ R
Sbjct: 307 VWANQVNARIMLTRTNRRKYLDDPLPLAKRQHLNGGPTSVSLMTGENDKELDQFVLLRRF 366
Query: 276 HVVFAPHLADTSCEFEITREGV 297
V+F S +F +T GV
Sbjct: 367 SVIFGSVSTPGSVDFVVTNAGV 388
>gi|332017004|gb|EGI57803.1| DNA repair protein XRCC3 [Acromyrmex echinatior]
Length = 247
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 131/283 (46%), Gaps = 49/283 (17%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T GC +D LGGGIPC IT+L +G+GKTQ LQL L+ QLP + GGL A ++Y+ T
Sbjct: 12 TTGCSRLDAKLGGGIPCRGITQLYGAAGTGKTQLALQLCLTVQLPITAGGLGAGAIYICT 71
Query: 81 EFPFPMRRLHQLSHTFRPSNDH-NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
E FP +RL QL + H D I V + + ++L+ + + N+
Sbjct: 72 ETAFPSKRLQQLLTKSEIAKTHFVNGDVILVGHIATSEELVLCLQHRVPVLMNTRK---- 127
Query: 140 IRLIVIDSIAALFR-SDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
I L++IDSIAA +R D+++ + KRS I L + L V+ NQV ++
Sbjct: 128 IGLLIIDSIAAPYRIEDWNDVLQCKTKRS-----IGRQLHELCKNDDLCVICINQVSAVI 182
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ + L S G PALG+AW++ + + ++ R
Sbjct: 183 DGHR------------LISEGANEQPALGLAWSSMITTSIYFYR---------------- 214
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
R + R V+ A HL + +FE+ GV VE
Sbjct: 215 ----------RLSSRYACVMLASHLPRITFQFEVEESGVKAVE 247
>gi|328874953|gb|EGG23318.1| AAA ATPase domain-containing protein [Dictyostelium fasciculatum]
Length = 410
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 104/189 (55%), Gaps = 20/189 (10%)
Query: 25 PIIDRCL-GGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFP 83
P + C+ GG N ITE+ E+GSGKTQ C+QL QLP GGL+ ++Y+ TE P
Sbjct: 50 PNVQFCIESGGFTPNGITEISGEAGSGKTQLCMQLCFHVQLPYELGGLNGGAIYIGTETP 109
Query: 84 FPMRRLHQLSHT----FRPSNDHN-------PCDYIFVQSVHSVDQLLDIMPK-IESFIK 131
FPM R ++S + N P D + + + ++ LLD++ K IK
Sbjct: 110 FPMNRFLKISQNRLAVINQARQENGLPPIDVPPDMVMTRRANDINNLLDMLTKNFHELIK 169
Query: 132 NSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVT 191
N +L++IDSIAAL RS+F N +++ +++ +++S L+ ++ +G+ +LV
Sbjct: 170 NHVT-----KLLIIDSIAALIRSEFGN--ENILEKTNKLWELSNQLRIISEQYGITILVI 222
Query: 192 NQVVDLMEP 200
NQV D EP
Sbjct: 223 NQVTDYFEP 231
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 215 LYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRS 274
L++ + + PALG++W N VN+R+ LS+ + N R
Sbjct: 320 LFNQNKAMVPALGLSWTNFVNTRIMLSKTPLHLPAPN----------------SSTPVRK 363
Query: 275 LHVVFAPHLADTSCEFEITREGVFGVER 302
+ V+ + +L + S F I GV G+E+
Sbjct: 364 MSVILSSNLPNQSMYFFIDAHGVIGLEQ 391
>gi|195446056|ref|XP_002070607.1| GK10943 [Drosophila willistoni]
gi|194166692|gb|EDW81593.1| GK10943 [Drosophila willistoni]
Length = 349
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 144/308 (46%), Gaps = 56/308 (18%)
Query: 4 PMTPQNLLDNPLTT---EKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
PM+ +L PL + T GCP +DRC GGGI ITE+ SG GKTQ LQL +
Sbjct: 71 PMSADSLF-KPLANVRWSRITFGCPALDRCTGGGIVTRGITEICGASGVGKTQLLLQLAV 129
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVD 117
QLP GGL+ ++ TE FP RR+ ++S F P + N +FV+ V
Sbjct: 130 CVQLPLHLGGLARGVAFICTEDAFPSRRMLEISKVFEARYPKENLNFLANVFVEQQFEVK 189
Query: 118 QLLD-IMPKIESFIKNSSNSRLPIRLIVIDSIAALFR--SDFDNTMDDLKKRSFLFFKIS 174
LL+ + ++ ++ + I LI+IDS+AA+FR +D+D D++ +++
Sbjct: 190 PLLECVSNRLPQLMQQHA-----IGLIIIDSVAAIFRLFTDYDERTRDMR-------RLA 237
Query: 175 GMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPI--CPALGIAWAN 232
L A + AV+ NQ+ +P+ P LG+ WA+
Sbjct: 238 NDLLTYADKYNCAVICINQMTS----------------SSATRDDKPMQDIPCLGLQWAH 281
Query: 233 CVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEI 292
+RL +S+ V +++++ + + T R L ++++P + EF +
Sbjct: 282 LGRTRLIVSK----VPKQHRLGDQLI------------TVRKLEIMYSPETPNNVAEFLV 325
Query: 293 TREGVFGV 300
T EGV V
Sbjct: 326 TSEGVVDV 333
>gi|325186625|emb|CCA21173.1| DNA repair protein XRCC3 putative [Albugo laibachii Nc14]
Length = 262
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 141/302 (46%), Gaps = 81/302 (26%)
Query: 22 VGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTE 81
G P IDR L GG + E+ E+ SGKTQ CLQL L L ++ Y+ TE
Sbjct: 17 TGSPNIDRLLHGGFRQGLLHEICGEASSGKTQLCLQLLLQMCLEDE------AACYVSTE 70
Query: 82 FPFPMRRLHQLS------HTF------------RPSNDHNPCDYIFVQSVHSVDQLLDIM 123
++RLH+L+ H F S D IF++ ++ +D+L+ ++
Sbjct: 71 GIGSIKRLHELAGIYADRHAFALKKRRRGFTGDTQSGSKFFLDRIFIEHIYEIDELIGLL 130
Query: 124 PKIESFIKNSSNSRLP-------IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGM 176
SRLP + L+VIDSIAALFR + ++ D+ +R+ L F+I+
Sbjct: 131 -----------QSRLPSLLTQKQVTLVVIDSIAALFRPESTKSIQDVSERARLMFQIANS 179
Query: 177 LKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNS 236
+K + + + +VTNQV + EPN N + PALG++W+NC++
Sbjct: 180 IKILCGRYNVVFIVTNQVSSIFEPNSRENRFK---------------PALGLSWSNCIHQ 224
Query: 237 RLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREG 296
RL LSR+ D +E+ R + V F+P++ T F IT+EG
Sbjct: 225 RLVLSRDAD-----------------TEE-------RHVKVAFSPYIPQTRATFSITQEG 260
Query: 297 VF 298
VF
Sbjct: 261 VF 262
>gi|327280368|ref|XP_003224924.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Anolis
carolinensis]
Length = 395
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 123/232 (53%), Gaps = 24/232 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D+ L GGI C SITE+ SG GKTQFC+ ++L A LP+S GG S + +Y+ TE F
Sbjct: 90 LDKILHGGIACGSITEITGPSGCGKTQFCIMMSLLATLPTSMGGFSGAVIYIDTESAFSA 149
Query: 87 RRL-----HQLSHTFRPSNDH-NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
RL H+ H F + I++ + D +L + +E I + + +
Sbjct: 150 ERLIEIAQHRFPHYFASEEKLISMSSSIYLYRELTCDGVLKRIESLEEEIISKN-----V 204
Query: 141 RLIVIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV---- 195
+L+++DSIA++ R +FD + +L++R+ L K + +LK +A F + V++TNQ+
Sbjct: 205 KLVILDSIASVVRKEFDTKLQGNLRERTNLLTKEASILKYLAEEFSIPVILTNQITTWLS 264
Query: 196 -------DLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ + SG + ALG W++ VN+RL L
Sbjct: 265 EGLALQADLLSPADDLSLSEGPSRNGAGESGY-VTAALGNTWSHSVNTRLIL 315
>gi|125775489|ref|XP_001358960.1| GA17378 [Drosophila pseudoobscura pseudoobscura]
gi|54638701|gb|EAL28103.1| GA17378 [Drosophila pseudoobscura pseudoobscura]
Length = 348
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 132/286 (46%), Gaps = 43/286 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGG+ ITE+ +G GKTQ LQL L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGVVTRGITEICGAAGVGKTQLLLQLALCVQLPVKLGGLGRGVAYI 146
Query: 79 HTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL ++S P N IFV+ + L++ + ++ ++ S
Sbjct: 147 CTEDAFPARRLLEMSKALEARYPQEQLNFLGNIFVEHQYESQPLINCVSNRLPRLLQQHS 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR D +R+ +++ L + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYTDFLERARQMRRLADALISYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
+GL G L + P LG+ WA+ +R+ +SR ++Q++
Sbjct: 257 AS------SGSGLATGPL-------QDEVPCLGLQWAHLGRTRMRISRVPKQHRVKDQLL 303
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
T R L VV++P ++ EF IT EGV V
Sbjct: 304 ----------------TVRKLEVVYSPETPNSFAEFLITSEGVVDV 333
>gi|195144506|ref|XP_002013237.1| GL23505 [Drosophila persimilis]
gi|194102180|gb|EDW24223.1| GL23505 [Drosophila persimilis]
Length = 348
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 136/286 (47%), Gaps = 43/286 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGG+ ITE+ +G GKTQ LQL L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGVVTRGITEICGAAGVGKTQLLLQLALCVQLPLKLGGLGRGVAYI 146
Query: 79 HTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RR+ ++S P N IFV+ + L++ + ++ ++ S
Sbjct: 147 CTEDAFPARRMLEMSKALEARYPQEQLNFLGNIFVEHQYESQPLINCVSNRLPRLLQQHS 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR D +R+ +++ L + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYTDFLERARQMRRLADALISYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
+GL G+L + P LG+ WA+ +R+ +SR V +++++
Sbjct: 257 AS------SGSGLATGSL-------QDEVPCLGLQWAHLGRTRMRISR----VPKQHRVT 299
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
+ + T R L VV++P ++ EF IT EGV V
Sbjct: 300 DQLL------------TVRKLEVVYSPETPNSFAEFLITSEGVVDV 333
>gi|149408647|ref|XP_001508473.1| PREDICTED: DNA repair protein XRCC3-like [Ornithorhynchus anatinus]
Length = 402
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 141/304 (46%), Gaps = 46/304 (15%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P K ++GC ++D LGGG+P ITEL S +GKTQ +QL LS Q P +GGL A
Sbjct: 76 PAQHRKLSLGCSVLDGLLGGGLPLAGITELAGRSSAGKTQIGMQLCLSVQYPPLYGGLGA 135
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDY---------IFVQSVHSVDQLLDIMP 124
++Y+ TE FP +RL QL + P + IF++ ++ L D +
Sbjct: 136 GAVYICTEDVFPNKRLQQLIAQQQKLRADIPGEVIERMKFGNNIFIEHAADLETLQDCVG 195
Query: 125 KIESFIKNSSNSRLPI-------RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGML 177
K R+PI RL+V+DS+AALFR +F D R+ + L
Sbjct: 196 K-----------RVPILLARGMARLVVVDSVAALFRCEFG--ARDSVGRARCLQSLGAKL 242
Query: 178 KAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSR 237
++ F VL NQV D+++ E + N G + + PALG+ W+N + R
Sbjct: 243 HQLSAQFDSPVLCINQVTDILDERETAH----SNFGLEEEA---VTPALGLTWSNQLLMR 295
Query: 238 LFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ + R + GG + R+L VVFAPHL C F + EGV
Sbjct: 296 MMVHR----------LPAGGEPTETAGTSAPGPVVRALRVVFAPHLPPAFCYFTVNAEGV 345
Query: 298 FGVE 301
G++
Sbjct: 346 KGLK 349
>gi|403416182|emb|CCM02882.1| predicted protein [Fibroporia radiculosa]
Length = 492
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 146/315 (46%), Gaps = 26/315 (8%)
Query: 10 LLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHG 69
L D L E T G +D L GGI + E+V ES +GKTQ LQL+LS Q+P + G
Sbjct: 68 LEDADLEDEMFTTGDSCLDEVLDGGIRTGMLWEIVGESAAGKTQLALQLSLSVQIPHTLG 127
Query: 70 GLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHS--VDQLLDI----M 123
GLS ++ YL T P RL ++ P C + ++ + + LL + +
Sbjct: 128 GLSGTACYLTTSTALPTSRLTEIMER-HPLLSRENCSLSAIHTIKTPEIPILLHVLSTRL 186
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
P + + N P++L+VID++A LF T D L +RS +IS +L +A
Sbjct: 187 PNLVDSLAKEQNPN-PVKLLVIDALAELFHMHDKTTADVLGQRSKHLAEISTLLHTLASK 245
Query: 184 FGLAVLVTNQVVDLM-----EPNEGVNGLRVGNLGCLY---SSGRP----ICPALGIAWA 231
+ +AVLV N+V D+ P E + + + + G P +LG+ WA
Sbjct: 246 YRIAVLVLNEVQDVFSNFSYSPEENSSEDLAYHDQVRWFGRADGVPGEDRKEASLGLVWA 305
Query: 232 NCVNSRLFLSRNE-----DFVVRENQMVNGGVGGSGSEDFVCRRTR-RSLHVVFAPHLAD 285
N VN+R+ LSR D + G + + TR R L ++F+ +
Sbjct: 306 NQVNTRIMLSRTTRERVLDVTEKRRTKRRRLDGSQSHTSTMPQTTRLRCLSIIFSSIVPP 365
Query: 286 TSCEFEITREGVFGV 300
TS ++ +T EG+ +
Sbjct: 366 TSVDYIVTAEGIAAL 380
>gi|18181987|dbj|BAB83901.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
Length = 319
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 133/292 (45%), Gaps = 48/292 (16%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T +L + +K T G +D LGGGI +ITEL E GSGKTQ C QL+++ QLP
Sbjct: 72 TAYDLKIESMNIKKITTGSRNLDELLGGGIETKTITELFGEFGSGKTQICHQLSVNVQLP 131
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GGL ++Y+ TE F R+ Q++ D + ++++++S Q+ I+ K
Sbjct: 132 EDKGGLEGKAVYIDTEGTFRWERIEQMARGVGLDPDEVMKNIYWIRAINSHHQIA-IVDK 190
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ + +KN + IRL+V+DS+ + FR++F ++L R L + L +A F
Sbjct: 191 LFTMVKNDN-----IRLVVVDSVTSHFRAEFPGR-ENLAMRQQLLNRHLHQLMRLADIFN 244
Query: 186 LAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+AV++TNQV + P+ Y G P G + R++L +
Sbjct: 245 VAVVITNQV--MARPD------------VFY--GDPTQAVGGHVLGHAPGVRVYLKK--- 285
Query: 246 FVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
R +R VV APHL + F IT G+
Sbjct: 286 ----------------------SRGNKRIARVVDAPHLPEGETVFAITEWGI 315
>gi|449502449|ref|XP_002199421.2| PREDICTED: DNA repair protein RAD51 homolog 2 [Taeniopygia guttata]
Length = 400
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 124/233 (53%), Gaps = 18/233 (7%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+DR L GG+PC S+TE+ G GKTQFC+ L++ A LP S GGL + +Y+ TE F
Sbjct: 90 LDRVLHGGVPCGSLTEITGPPGCGKTQFCIMLSVLATLPVSMGGLDGAVIYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSN-DHNPCDYIFVQSVHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ P+ D + +S+H +L ++ +I S + + ++LI
Sbjct: 150 ERLIEIAANRFPAYFDSDEKLLCMTRSIHLYRELTCCSVLKRIMSLEEEVILKK--VKLI 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV------- 195
+IDS+A++ R +FD + +L +RS + + +LK +A F + V++TNQ+
Sbjct: 208 IIDSVASVVRKEFDTKLQGNLAERSNFLTRGASVLKYLAEEFSIPVILTNQITTSLSSGP 267
Query: 196 ----DLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
DL+ P + ++ L G+ + ALG W++ VN+RL L ++
Sbjct: 268 GVWADLVSPADDLS-LSEGSSVSEKRDSSYVTAALGNTWSHSVNTRLILQYHD 319
>gi|17136506|ref|NP_476740.1| spindle B [Drosophila melanogaster]
gi|3643817|gb|AAC42663.1| spindle B [Drosophila melanogaster]
gi|7299874|gb|AAF55050.1| spindle B [Drosophila melanogaster]
gi|201065577|gb|ACH92198.1| FI03211p [Drosophila melanogaster]
gi|209946376|gb|ACI97419.1| spindle B [Drosophila melanogaster]
gi|209946392|gb|ACI97427.1| spindle B [Drosophila melanogaster]
gi|209946398|gb|ACI97430.1| spindle B [Drosophila melanogaster]
gi|209946404|gb|ACI97433.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 132/283 (46%), Gaps = 50/283 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGG+ ITEL +G GKTQ LQL+L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYI 146
Query: 79 HTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL Q+S P + N IFV++ + LL ++ +I ++
Sbjct: 147 CTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR +D +R+ +++ L + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
G+ P LG+ WA+ +RL +SR V ++++M
Sbjct: 257 AT--------------------RDGQDEIPCLGLQWAHLGRTRLRVSR----VPKQHRMG 292
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ + T R L ++++P + EF IT EGV
Sbjct: 293 DQLI------------TVRKLEILYSPETPNDFAEFLITAEGV 323
>gi|403264489|ref|XP_003924513.1| PREDICTED: DNA repair protein RAD51 homolog 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 350
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 123/229 (53%), Gaps = 23/229 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L +++ +IES + + I+L+
Sbjct: 150 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK--GIKLV 207
Query: 144 VIDSIAALFRSDFDNTM-DDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
+IDS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQ+
Sbjct: 208 IIDSVASVVRKEFDTQLPGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGAL 267
Query: 195 ---VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G + ALG W++CVN+RL L
Sbjct: 268 ASQADLVSPADDLS-LSEGTSG-----SSCVTAALGNTWSHCVNTRLIL 310
>gi|18181993|dbj|BAB83904.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
Length = 319
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 134/292 (45%), Gaps = 48/292 (16%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T +L + +K T G +D LGGGI +ITEL E GSGKTQ C QL+++ QLP
Sbjct: 72 TAYDLKIESMNIKKITTGSRNLDELLGGGIETKTITELFGEFGSGKTQICHQLSVNVQLP 131
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GGL ++Y+ TE F R+ Q++ D + ++++++S Q+ I+ K
Sbjct: 132 EDKGGLEGKAVYIDTEGTFRWERIEQMARGVGLDPDEVMKNIYWIRAINSHHQIA-IVDK 190
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ + +KN + I+L+V+DS+ + FR++F ++L R L + L +A F
Sbjct: 191 LFTMVKNDN-----IKLVVVDSVTSHFRAEFPGR-ENLAMRQQLLNRHLHQLMRLADIFN 244
Query: 186 LAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+AV++TNQV + P+ Y G P G + R++L +
Sbjct: 245 VAVVITNQV--MARPD------------VFY--GDPTQAVGGHVLGHAPGVRVYLKK--- 285
Query: 246 FVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
R ++R VV APHL + F IT G+
Sbjct: 286 ----------------------SRGSKRIARVVDAPHLPEGETVFAITEWGI 315
>gi|403264491|ref|XP_003924514.1| PREDICTED: DNA repair protein RAD51 homolog 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 350
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 123/229 (53%), Gaps = 23/229 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L +++ +IES + + I+L+
Sbjct: 150 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK--GIKLV 207
Query: 144 VIDSIAALFRSDFDNTM-DDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
+IDS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQ+
Sbjct: 208 IIDSVASVVRKEFDTQLPGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGAL 267
Query: 195 ---VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G + ALG W++CVN+RL L
Sbjct: 268 ASQADLVSPADDLS-LSEGTSG-----SSCVTAALGNTWSHCVNTRLIL 310
>gi|2262211|gb|AAB63359.1| RecA-like protein [Mus musculus]
Length = 350
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 125/231 (54%), Gaps = 27/231 (11%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+PC S+TE+ G GKTQFC+ +++ A LP+S GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVPCGSLTEITGPPGCGKTQFCIMMSVLATLPTSLGGLEGAVVYIDTESAFTA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L ++ ++ES + + ++L+
Sbjct: 150 ERLVEIAESRFPQYFNTEEKLLLTSSRVHLCRELTCEGLLQRLESLEEEIISK--GVKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
++DSIA++ R +FD + ++K+R+ K + +LK +A F + V++TNQ+
Sbjct: 208 IVDSIASVVRKEFDPKLQGNIKERNKFLGKGASLLKYLAGEFSIPVILTNQITTHLSGAL 267
Query: 195 ---VDLMEPNEGVNGLRVGNLG--CLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G CL + ALG W +CVN+RL L
Sbjct: 268 PSQADLVSPADDLS-LSEGTSGSSCLVA-------ALGNTWGHCVNTRLIL 310
>gi|18182001|dbj|BAB83908.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
Length = 319
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 133/292 (45%), Gaps = 48/292 (16%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T +L + +K T G +D LGGGI +ITEL E GSGKTQ C QL+++ QLP
Sbjct: 72 TAYDLKIESMNIKKITTGSRNLDELLGGGIETKTITELFGEFGSGKTQICHQLSVNVQLP 131
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GGL ++Y+ TE F R+ Q++ D + ++++++S Q+ I+ K
Sbjct: 132 EDKGGLEGKAVYIDTEGTFRWERIEQMARGVGLDPDEVMKNIYWIRAINSHHQIA-IVDK 190
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ + +KN + I+L+V+DS+ + FR++F ++L R L + L +A F
Sbjct: 191 LFTMVKNDN-----IKLVVVDSVTSHFRAEFPGR-ENLAMRQQLLNRHLHQLMRLADIFN 244
Query: 186 LAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+AV++TNQV + P+ Y G P G + R++L +
Sbjct: 245 VAVVITNQV--MARPD------------VFY--GDPTQAVGGHVLGHAPGVRVYLKK--- 285
Query: 246 FVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
R +R VV APHL + F IT G+
Sbjct: 286 ----------------------SRGNKRIARVVDAPHLPEGEAVFAITEWGI 315
>gi|31982072|ref|NP_033040.2| DNA repair protein RAD51 homolog 2 isoform 1 [Mus musculus]
gi|38258893|sp|O35719.2|RA51B_MOUSE RecName: Full=DNA repair protein RAD51 homolog 2; Short=R51H2;
AltName: Full=RAD51 homolog B; AltName: Full=RAD51-like
protein 1
gi|26328691|dbj|BAC28084.1| unnamed protein product [Mus musculus]
gi|148670701|gb|EDL02648.1| RAD51-like 1 (S. cerevisiae), isoform CRA_b [Mus musculus]
Length = 350
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 125/231 (54%), Gaps = 27/231 (11%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+PC S+TE+ G GKTQFC+ +++ A LP+S GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVPCGSLTEITGPPGCGKTQFCIMMSVLATLPTSLGGLEGAVVYIDTESAFTA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L ++ ++ES + + ++L+
Sbjct: 150 ERLVEIAESRFPQYFNTEEKLLLTSSRVHLCRELTCEGLLQRLESLEEEIISK--GVKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
++DSIA++ R +FD + ++K+R+ K + +LK +A F + V++TNQ+
Sbjct: 208 IVDSIASVVRKEFDPKLQGNIKERNKFLGKGASLLKYLAGEFSIPVILTNQITTHLSGAL 267
Query: 195 ---VDLMEPNEGVNGLRVGNLG--CLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G CL + ALG W +CVN+RL L
Sbjct: 268 PSQADLVSPADDLS-LSEGTSGSSCLVA-------ALGNTWGHCVNTRLIL 310
>gi|171186395|ref|YP_001795314.1| DNA repair and recombination protein RadA [Pyrobaculum neutrophilum
V24Sta]
gi|226736610|sp|B1YC14.1|RADA_THENV RecName: Full=DNA repair and recombination protein RadA
gi|170935607|gb|ACB40868.1| DNA repair and recombination protein RadA [Pyrobaculum neutrophilum
V24Sta]
Length = 330
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 121/230 (52%), Gaps = 23/230 (10%)
Query: 16 TTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASS 75
T + + G +D LGGGI ++TE+ E GSGKTQ C QL + QLP GGL A +
Sbjct: 95 TIRRISTGVKALDELLGGGIETRAVTEVAGEFGSGKTQLCHQLAVMVQLPEERGGLGAKA 154
Query: 76 LYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSN 135
+Y+ TE F R+ Q++ R + + IF +S D + ++ + +S IK ++
Sbjct: 155 IYIDTENTFRPERIMQIAKA-RGLDPDQALNNIFYARAYSSDHQMILVDQAKSIIKQNN- 212
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+ L+V+DS+ A FRS+F + +++ L ++ +L+ +A + +AV++TNQV
Sbjct: 213 ----VALLVVDSVIAHFRSEFPGRENLAERQQKLNKHVADLLR-LADAYDVAVVITNQV- 266
Query: 196 DLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+ +P+ + G P+ PA G A+ RL+L ++++
Sbjct: 267 -MAQPD------------VFF--GNPLRPAGGNILAHGATYRLWLRKSKE 301
>gi|334350818|sp|P0CW91.1|RADA_AERPX RecName: Full=DNA repair and recombination protein RadA
gi|18181985|dbj|BAB83900.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|18181995|dbj|BAB83905.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|18181997|dbj|BAB83906.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|18181999|dbj|BAB83907.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|18182003|dbj|BAB83909.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|18182005|dbj|BAB83910.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|109689234|dbj|BAE96771.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|109689238|dbj|BAE96773.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|109689240|dbj|BAE96774.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|109689242|dbj|BAE96775.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|109689244|dbj|BAE96776.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|109689246|dbj|BAE96777.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
Length = 319
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 133/292 (45%), Gaps = 48/292 (16%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T +L + +K T G +D LGGGI +ITEL E GSGKTQ C QL+++ QLP
Sbjct: 72 TAYDLKIESMNIKKITTGSRNLDELLGGGIETKTITELFGEFGSGKTQICHQLSVNVQLP 131
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GGL ++Y+ TE F R+ Q++ D + ++++++S Q+ I+ K
Sbjct: 132 EDKGGLEGKAVYIDTEGTFRWERIEQMARGVGLDPDEVMKNIYWIRAINSHHQIA-IVDK 190
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ + +KN + I+L+V+DS+ + FR++F ++L R L + L +A F
Sbjct: 191 LFTMVKNDN-----IKLVVVDSVTSHFRAEFPGR-ENLAMRQQLLNRHLHQLMRLADIFN 244
Query: 186 LAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+AV++TNQV + P+ Y G P G + R++L +
Sbjct: 245 VAVVITNQV--MARPD------------VFY--GDPTQAVGGHVLGHAPGVRVYLKK--- 285
Query: 246 FVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
R +R VV APHL + F IT G+
Sbjct: 286 ----------------------SRGNKRIARVVDAPHLPEGETVFAITEWGI 315
>gi|296215342|ref|XP_002754085.1| PREDICTED: DNA repair protein RAD51 homolog 2 [Callithrix jacchus]
Length = 350
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 123/229 (53%), Gaps = 23/229 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L +++ +IES + + ++L+
Sbjct: 150 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK--GVKLV 207
Query: 144 VIDSIAALFRSDFDNTM-DDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
+IDS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQ+
Sbjct: 208 IIDSVASVVRKEFDTQLPGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGAL 267
Query: 195 ---VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G + ALG W++CVN+RL L
Sbjct: 268 ASQADLVSPADDLS-LSEGTSG-----SSCVTAALGNTWSHCVNTRLIL 310
>gi|14600463|ref|NP_146978.1| DNA repair and recombination protein RadA [Aeropyrum pernix K1]
gi|334350817|sp|P0CW92.1|RADA_AERPE RecName: Full=DNA repair and recombination protein RadA
gi|5103509|dbj|BAA79030.1| DNA repair and recombination protein RadA [Aeropyrum pernix K1]
Length = 319
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 133/292 (45%), Gaps = 48/292 (16%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T +L + +K T G +D LGGGI +ITEL E GSGKTQ C QL+++ QLP
Sbjct: 72 TAYDLKIESMNIKKITTGSRNLDELLGGGIETKTITELFGEFGSGKTQICHQLSVNVQLP 131
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GGL ++Y+ TE F R+ Q++ D + ++++++S Q+ I+ K
Sbjct: 132 EDKGGLEGKAVYVDTEGTFRWERIEQMARGVGLDPDEVMKNIYWIRAINSHHQIA-IVDK 190
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ + +KN + I+L+V+DS+ + FR++F ++L R L + L +A F
Sbjct: 191 LFTMVKNDN-----IKLVVVDSVTSHFRAEFPGR-ENLAMRQQLLNRHLHQLMRLADIFN 244
Query: 186 LAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+AV++TNQV + P+ Y G P G + R++L +
Sbjct: 245 VAVVITNQV--MARPD------------VFY--GDPTQAVGGHVLGHAPGVRVYLKK--- 285
Query: 246 FVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
R +R VV APHL + F IT G+
Sbjct: 286 ----------------------SRGNKRIARVVDAPHLPEGETVFAITEWGI 315
>gi|18181991|dbj|BAB83903.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
Length = 319
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 133/292 (45%), Gaps = 48/292 (16%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T +L + +K T G +D LGGGI +ITEL E GSGKTQ C QL+++ QLP
Sbjct: 72 TAYDLKIESMNIKKITTGSRNLDELLGGGIETKTITELFGEFGSGKTQICHQLSVNVQLP 131
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GGL ++Y+ TE F R+ Q++ D + ++++++S Q+ I+ K
Sbjct: 132 EDKGGLEGKAVYIDTEGTFRWERIEQMARGVGLDPDEVMKNIYWIRAINSHHQIA-IVDK 190
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ + +KN + I+L+V+DS+ + FR++F ++L R L + L +A F
Sbjct: 191 LFTMVKNDN-----IKLVVVDSVTSHFRAEFPGR-ENLAMRQQLLNRHLHQLMRLADIFN 244
Query: 186 LAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+AV++TNQV + P+ Y G P G + R++L +
Sbjct: 245 VAVVITNQV--MARPD------------VFY--GDPTQAVGGHVLGHAPGVRVYLKKG-- 286
Query: 246 FVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
R +R VV APHL + F IT G+
Sbjct: 287 -----------------------RGNKRIARVVDAPHLPEGETVFAITEWGI 315
>gi|109689248|dbj|BAE96778.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|109689250|dbj|BAE96779.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|109689252|dbj|BAE96780.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|109689254|dbj|BAE96781.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
Length = 319
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 133/292 (45%), Gaps = 48/292 (16%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T +L + +K T G +D LGGG+ +ITEL E GSGKTQ C QL+++ QLP
Sbjct: 72 TAYDLKIESMNIKKITTGSRNLDELLGGGVETKTITELFGEFGSGKTQICHQLSVNVQLP 131
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GGL ++Y+ TE F R+ Q++ D + ++++++S Q+ I+ K
Sbjct: 132 EDKGGLEGKAVYIDTEGTFRWERIEQMARGVGLDPDEVMKNIYWIRAINSHHQIA-IVDK 190
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ + +KN + I+L+V+DS+ + FR++F ++L R L + L +A F
Sbjct: 191 LFTMVKNDN-----IKLVVVDSVTSHFRAEFPGR-ENLAMRQQLLNRHLHQLMRLADIFN 244
Query: 186 LAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+AV++TNQV + P+ Y G P G + R++L +
Sbjct: 245 VAVVITNQV--MARPD------------VFY--GDPTQAVGGHVLGHAPGVRVYLKK--- 285
Query: 246 FVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
R +R VV APHL + F IT G+
Sbjct: 286 ----------------------SRGNKRIARVVDAPHLPEGETVFAITEWGI 315
>gi|195110743|ref|XP_001999939.1| GI22807 [Drosophila mojavensis]
gi|193916533|gb|EDW15400.1| GI22807 [Drosophila mojavensis]
Length = 345
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 148/307 (48%), Gaps = 51/307 (16%)
Query: 4 PMTPQNLLDNP--LTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
P++ +L P L + T GC +D+C GGG+ ITE+ SG GK+Q LQL+LS
Sbjct: 70 PVSADSLFKIPARLKWSRVTFGCAALDQCTGGGVSIRGITEICGNSGVGKSQVLLQLSLS 129
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQ 118
QLP++ GGL ++ TE FP RRL Q+S F P+ N IF++ + +
Sbjct: 130 VQLPATLGGLGKGVAFICTEDAFPSRRLLQISKAFEARYPAEKLNFLGNIFIEHQYESEP 189
Query: 119 LLD-IMPKIESFIKNSSNSRLPIRLIVIDSIAALFR--SDFDNTMDDLKKRSFLFFKISG 175
LLD I ++ ++ S I LIVIDS+AA+FR +DFD D++ ++
Sbjct: 190 LLDCISNRLPQLLQEHS-----IGLIVIDSVAAIFRLYTDFDKRARDMR-------RMVH 237
Query: 176 MLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVN 235
L + A + AV+ +NQ M E R+ ++ C LG+ WAN
Sbjct: 238 ALLSYADKYDCAVVCSNQ----MTATEETGETRMEDVPC-----------LGLQWANLSR 282
Query: 236 SRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITRE 295
+R+ +S+ + +Q++ T R L +V++P + EF IT E
Sbjct: 283 TRMRISKVPKQYKQGDQLL----------------TVRKLEIVYSPETPNAFTEFLITAE 326
Query: 296 GVFGVER 302
GV V +
Sbjct: 327 GVVNVPK 333
>gi|17944958|gb|AAL48542.1| RE02671p [Drosophila melanogaster]
Length = 341
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 132/283 (46%), Gaps = 50/283 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGG+ ITEL +G GKT+ LQL+L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTELLLQLSLCVQLPRELGGLGKGVAYI 146
Query: 79 HTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL Q+S P + N IFV++ + LL ++ +I ++
Sbjct: 147 CTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR +D +R+ +++ L + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
G+ P LG+ WA+ +RL +SR V ++++M
Sbjct: 257 AT--------------------RDGQDEIPCLGLQWAHLGRTRLRVSR----VPKQHRMG 292
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ + T R L ++++P + EF IT EGV
Sbjct: 293 DQLI------------TVRKLEILYSPETPNDFAEFLITAEGV 323
>gi|109689236|dbj|BAE96772.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
Length = 319
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 133/292 (45%), Gaps = 48/292 (16%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T +L + +K T G +D LGGGI +ITEL E GSGKTQ C QL+++ QLP
Sbjct: 72 TAYDLKIESMNIKKITTGSRNLDELLGGGIETKTITELFGEFGSGKTQICHQLSVNVQLP 131
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GGL ++Y+ TE F R+ Q++ D + ++++++S Q+ I+ K
Sbjct: 132 EDKGGLEGKAVYIDTEGTFRWERIEQMARGVGLDPDEVMKNIYWIRAINSHHQIA-IVDK 190
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ + +KN + I+L+V+DS+ + FR++F ++L R L + L +A F
Sbjct: 191 LFTMVKNVN-----IKLVVVDSVTSHFRAEFPGR-ENLAMRQQLLNRHLHQLMRLADIFN 244
Query: 186 LAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+AV++TNQV + P+ Y G P G + R++L +
Sbjct: 245 VAVVITNQV--MARPD------------VFY--GDPTQAVGGHVLGHAPGVRVYLKK--- 285
Query: 246 FVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
R +R VV APHL + F IT G+
Sbjct: 286 ----------------------SRGNKRIARVVDAPHLPEGETVFAITEWGI 315
>gi|389860554|ref|YP_006362793.1| DNA repair and recombination protein RadA [Thermogladius
cellulolyticus 1633]
gi|388525457|gb|AFK50655.1| DNA repair and recombination protein RadA [Thermogladius
cellulolyticus 1633]
Length = 322
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 136/296 (45%), Gaps = 48/296 (16%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T +++ L+ +K T G +D LGGG+ +ITE E G+GKTQ C QL+++ QLP
Sbjct: 74 TAKDVKYERLSIKKITTGSRELDNILGGGVETKTITEFFGEYGTGKTQICHQLSVNVQLP 133
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GGLS ++Y+ TE F R+ ++ D + IF Q ++ D + I+ +
Sbjct: 134 PEKGGLSGKAVYVDTEGTFRWERIEAMARAVGLEPD-KAMENIFYQRAYNSDHQISIVEE 192
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ SF+ ++ +RL+V+DS+ + FR+++ +++ L + +++ +A +
Sbjct: 193 LFSFVPKNN-----VRLVVLDSVTSHFRAEYPGREHLAERQQKLNAHLHQLMR-LAEAYN 246
Query: 186 LAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
LAV+VTNQV + P+ Y G P G A+ R+ L ++
Sbjct: 247 LAVVVTNQV--MARPD------------VFY--GDPTVAVGGHVLAHTPGVRVQLRKS-- 288
Query: 246 FVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+ +R +V APHL + F IT EG+ E
Sbjct: 289 -----------------------KGNKRIARIVDAPHLPEGEAVFVITEEGIRDAE 321
>gi|307171500|gb|EFN63341.1| DNA-repair protein XRCC3 [Camponotus floridanus]
Length = 253
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 129/280 (46%), Gaps = 51/280 (18%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T GC +D L GGIPC IT++ +G+GKTQ LQL LS QLP + GGL A ++Y+ T
Sbjct: 18 TTGCSKLDIILKGGIPCRGITQIYGAAGTGKTQLALQLCLSVQLPVTAGGLGAGAIYIST 77
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNP-CDYIFVQSVHSVDQL-LDIMPKIESFIKNSSNSRL 138
E FP RL QL + + H+ D IFV + ++D+L L + K+ + +
Sbjct: 78 ETAFPSERLQQLLQSSEIAKAHSVNGDVIFVNHIATIDELELCLQRKVPALMNIH----- 132
Query: 139 PIRLIVIDSIAALFR-SDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDL 197
I L+VIDSIAA +R D+ + + KR+ + L + L V+ NQV +
Sbjct: 133 KIGLLVIDSIAAPYRVEDWKDQLQGKSKRN-----VGRQLHELCKNNNLCVICINQVSAV 187
Query: 198 MEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGG 257
++ + ++ + P LG W++ + S ++ R
Sbjct: 188 IDSHSVISEDAIEQ------------PVLGFTWSSMITSSIYFYR--------------- 220
Query: 258 VGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
R + R ++ A HL + +F +++ GV
Sbjct: 221 -----------RNSARYACIMLASHLPRITFQFIVSQSGV 249
>gi|209946354|gb|ACI97408.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 132/283 (46%), Gaps = 50/283 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGG+ ITEL +G GKTQ LQL+L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYI 146
Query: 79 HTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL Q+S P + N IFV++ + LL ++ +I ++
Sbjct: 147 CTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR +D +R+ +++ L + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
G+ P LG+ WA+ +RL +SR V ++++M
Sbjct: 257 AT--------------------RDGQDEIPCLGLQWAHLGRTRLRVSR----VPKQHRMG 292
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ + T R L ++++P + EF IT +GV
Sbjct: 293 DQLI------------TVRKLEILYSPETPNDFAEFLITTDGV 323
>gi|296242500|ref|YP_003649987.1| DNA repair and recombination protein RadA [Thermosphaera aggregans
DSM 11486]
gi|296095084|gb|ADG91035.1| DNA repair and recombination protein RadA [Thermosphaera aggregans
DSM 11486]
Length = 326
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 127/283 (44%), Gaps = 48/283 (16%)
Query: 15 LTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSAS 74
L +K T G +D LGGGI +ITE E GSGKTQ C QL+++ QLP GGLS
Sbjct: 86 LNIKKITTGSKSLDDLLGGGIETKTITEFYGEYGSGKTQICHQLSVNVQLPPERGGLSGK 145
Query: 75 SLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSS 134
++Y+ TE F R+ ++ D D IF ++ D + I+ + +F+ +
Sbjct: 146 AVYVDTEGTFRWERIEAMARGLGLEPDQ-VMDNIFYMRAYNSDHQVSIIDDLFTFVPKND 204
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+RL+V+DS+ + FR++F +++ L + +++ +A F +AV+VTNQV
Sbjct: 205 -----VRLVVVDSVTSHFRAEFPGREHLAERQQKLNAHLHQLMR-LAEAFNIAVVVTNQV 258
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
+ P+ Y G P G A+ R+ L R++
Sbjct: 259 --MARPD------------VFY--GDPTTAVGGHVLAHTPGVRVQLRRSKG--------- 293
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+R VV APHL + F IT EG+
Sbjct: 294 ----------------NKRIARVVDAPHLPEGEAVFVITEEGI 320
>gi|209946344|gb|ACI97403.1| spindle B [Drosophila melanogaster]
gi|209946356|gb|ACI97409.1| spindle B [Drosophila melanogaster]
gi|209946384|gb|ACI97423.1| spindle B [Drosophila melanogaster]
gi|209946396|gb|ACI97429.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 132/283 (46%), Gaps = 50/283 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGG+ ITEL +G GKTQ LQL+L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYI 146
Query: 79 HTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL Q+S P + N IFV++ + LL ++ +I ++
Sbjct: 147 CTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR +D +R+ +++ L + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
G+ P LG+ WA+ +RL +SR V ++++M
Sbjct: 257 AT--------------------RDGQDEIPCLGLQWAHLGRTRLRVSR----VPKQHRMG 292
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ + T R L ++++P + EF IT +GV
Sbjct: 293 DQLI------------TVRKLEILYSPETPNDFAEFLITADGV 323
>gi|354472143|ref|XP_003498300.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Cricetulus
griseus]
Length = 387
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 125/232 (53%), Gaps = 29/232 (12%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D+ L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDKALHGGVACGSLTEITGPPGCGKTQFCIMMSVLATLPTNMGGLEGTVVYIDTESAFTA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VH-----SVDQLLDIMPKIESFIKNSSNSRLPI 140
RL +++ + P + + + S VH S + +L + +E I + +
Sbjct: 150 ERLVEIAESRFPLYFNTEEKLLLMSSKVHLHRELSCEAVLQRLESLEEEIISKG-----V 204
Query: 141 RLIVIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV----- 194
+L+++DSIA++ R +FD + ++K+R+ K + +LK +A F L V++TNQ+
Sbjct: 205 KLVIVDSIASVVRKEFDPQLQGNIKERNKFLAKQASLLKYLAEEFSLPVILTNQITTHLS 264
Query: 195 ------VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G + ALG +W++CVN+RL L
Sbjct: 265 GALPSQADLVSPADDLS-LSEGTSG-----SSCVVAALGNSWSHCVNTRLIL 310
>gi|47213355|emb|CAF92978.1| unnamed protein product [Tetraodon nigroviridis]
Length = 267
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 103/192 (53%), Gaps = 19/192 (9%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ +VGC ++D L GG+P ITEL +S +GKTQ LQL L Q P+ +GGL + ++Y+
Sbjct: 76 RLSVGCAVLDELLRGGLPAGGITELSGQSSAGKTQLALQLCLCVQYPTQYGGLDSGAVYI 135
Query: 79 HTEFPFPMRRLHQL---SHTFRPSNDHNP--------CDYIFVQSVHSVDQLLDIMPKIE 127
TE FP+RRL QL H RP D P D ++V+ +D L + +
Sbjct: 136 CTENCFPIRRLQQLISDQHALRP--DVPPSLISTLKFSDRVYVEHAADLDSLQRCLSRRV 193
Query: 128 SFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLA 187
+ +R +RL+V+DS+AA+FR +F + ++R+ +S L ++ F
Sbjct: 194 PLLL----ARGLVRLLVLDSVAAVFRGEFQAA--EWQERTRQMLSVSSTLHRLSWDFATP 247
Query: 188 VLVTNQVVDLME 199
VL NQV+ L +
Sbjct: 248 VLCINQVILLWQ 259
>gi|126460684|ref|YP_001056962.1| DNA repair and recombination protein RadA [Pyrobaculum calidifontis
JCM 11548]
gi|166218766|sp|A3MXX9.1|RADA_PYRCJ RecName: Full=DNA repair and recombination protein RadA
gi|126250405|gb|ABO09496.1| DNA repair and recombination protein RadA [Pyrobaculum calidifontis
JCM 11548]
Length = 332
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 120/227 (52%), Gaps = 23/227 (10%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D LGGGI ++TE+V E GSGKTQ C QL + QLP GGL A ++Y+
Sbjct: 100 RISTGVRALDELLGGGIETRAVTEVVGEFGSGKTQLCHQLAVMVQLPEDRGGLGAKAIYI 159
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ R + + IF +S D + ++ + +S I+ +
Sbjct: 160 DTENTFRPERIMQIAKA-RGLDPDQALNNIFYARAYSADHQMVLVEQAKSLIRQHN---- 214
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
+ L+V+DS+ A FR++F + +++ L I+ +L+ +A + +AV+VTNQV +
Sbjct: 215 -VALLVVDSVIAHFRAEFPGRENLAERQQKLNKHIADLLR-LADAYDVAVVVTNQV--MA 270
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+P+ + G P+ PA G A+ RL+L ++++
Sbjct: 271 QPD------------VFF--GNPLRPAGGNILAHGATYRLWLRKSKE 303
>gi|18181989|dbj|BAB83902.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
Length = 319
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 132/292 (45%), Gaps = 48/292 (16%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T +L + +K T G +D LGGGI +ITEL E GSGKTQ C QL+++ QLP
Sbjct: 72 TAYDLKIESMNIKKITTGSRNLDELLGGGIETKTITELFGEFGSGKTQICHQLSVNVQLP 131
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GGL ++Y+ TE F R+ Q++ D + ++++++S Q+ I+ K
Sbjct: 132 EDKGGLEGKAVYIDTEGTFRWERIEQMARGVGLDPDEVMKNIYWIRAINSHHQIA-IVDK 190
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ + +KN + I+L+V+DS+ + FR +F ++L R L + L +A F
Sbjct: 191 LFTMVKNDN-----IKLVVVDSVTSHFRVEFPG-RENLAMRQQLLNRHLHQLMRLADIFN 244
Query: 186 LAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+AV++TNQV + P+ Y G P G + R++L +
Sbjct: 245 VAVVITNQV--MARPD------------VFY--GDPTQAVGGHVLGHAPGVRVYLKK--- 285
Query: 246 FVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
R +R VV APHL + F IT G+
Sbjct: 286 ----------------------SRGDKRIARVVDAPHLPEGETVFAITEWGI 315
>gi|18312075|ref|NP_558742.1| DNA repair and recombination protein RadA [Pyrobaculum aerophilum
str. IM2]
gi|20139514|sp|Q8ZYR9.1|RADA_PYRAE RecName: Full=DNA repair and recombination protein RadA
gi|18159503|gb|AAL62924.1| DNA repair protein radA [Pyrobaculum aerophilum str. IM2]
gi|18478907|gb|AAL73354.1| DNA repair protein RadA [Pyrobaculum aerophilum]
Length = 333
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 119/227 (52%), Gaps = 23/227 (10%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D LGGGI ++TE+V E GSGKTQ C QL + QLP GGL A ++Y+
Sbjct: 101 RISTGVRSLDELLGGGIETRAVTEIVGEFGSGKTQLCHQLAVMVQLPEERGGLGAKAIYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ R + IF +S D + ++ + +S IK +
Sbjct: 161 DTENTFRPERIMQIAKA-RGLDSDQALHNIFYARAYSSDHQMILVEQAKSIIKQHN---- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
+ L+V+DS+ A FRS+F + +++ L ++ +L+ +A + +AV++TNQV +
Sbjct: 216 -VALLVVDSVIAHFRSEFPGRENLAERQQKLNKHVADLLR-LADAYDVAVVITNQV--MA 271
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+P+ + G P+ PA G A+ RL+L ++++
Sbjct: 272 QPD------------VFF--GNPLRPAGGNILAHGATYRLWLRKSKE 304
>gi|209946358|gb|ACI97410.1| spindle B [Drosophila melanogaster]
gi|209946362|gb|ACI97412.1| spindle B [Drosophila melanogaster]
gi|209946366|gb|ACI97414.1| spindle B [Drosophila melanogaster]
gi|209946370|gb|ACI97416.1| spindle B [Drosophila melanogaster]
gi|209946372|gb|ACI97417.1| spindle B [Drosophila melanogaster]
gi|209946374|gb|ACI97418.1| spindle B [Drosophila melanogaster]
gi|209946380|gb|ACI97421.1| spindle B [Drosophila melanogaster]
gi|209946382|gb|ACI97422.1| spindle B [Drosophila melanogaster]
gi|209946386|gb|ACI97424.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 131/283 (46%), Gaps = 50/283 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGG+ ITEL +G GKTQ LQL+L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYI 146
Query: 79 HTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL Q+S P + N IFV++ + LL ++ +I ++
Sbjct: 147 CTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR +D +R+ +++ L + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
G+ P LG+ WA+ +RL +SR V ++++M
Sbjct: 257 AT--------------------RDGQDEIPCLGLQWAHLGRTRLRVSR----VPKQHRMG 292
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ + T R L ++++P + E IT EGV
Sbjct: 293 DQLI------------TVRKLEILYSPETPNDFAEXXITAEGV 323
>gi|297695369|ref|XP_002824917.1| PREDICTED: DNA repair protein RAD51 homolog 2 isoform 1 [Pongo
abelii]
Length = 350
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 123/229 (53%), Gaps = 23/229 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEVTGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + PS + + S VH +L +++ +IES + + I+L+
Sbjct: 150 ERLVEIAESRFPSYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK--GIKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
++DS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQV
Sbjct: 208 ILDSVASVVRKEFDTQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQVTTHLSGAL 267
Query: 195 ---VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G + ALG W++ VN+RL L
Sbjct: 268 ASQADLVSPADDLS-LSEGTSG-----SSCVIAALGNTWSHSVNTRLIL 310
>gi|209946406|gb|ACI97434.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 131/283 (46%), Gaps = 50/283 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGG+ ITEL +G GKTQ LQL+L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYI 146
Query: 79 HTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL Q+S P + N IFV + + LL ++ +I ++
Sbjct: 147 CTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVXNHIEAEPLLACVINRIPRLMQQHG 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR +D +R+ +++ L + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
G+ P LG+ WA+ +RL +SR V ++++M
Sbjct: 257 AT--------------------RDGQDEIPCLGLQWAHLGRTRLRVSR----VPKQHRMG 292
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ + T R L ++++P + EF IT +GV
Sbjct: 293 DQLI------------TVRKLEILYSPETPNDFAEFLITTDGV 323
>gi|395849624|ref|XP_003797421.1| PREDICTED: DNA repair protein RAD51 homolog 2 [Otolemur garnettii]
Length = 350
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 122/234 (52%), Gaps = 29/234 (12%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P +D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 88 PALDEALCGGVACGSLTEITGPPGCGKTQFCMMMSVLATLPTNMGGLDGAVVYVDTESAF 147
Query: 85 PMRRLHQLSHTFRPSNDHNPCDYIFVQS-VH-----SVDQLLDIMPKIESFIKNSSNSRL 138
RL +++ + PS + + S VH S D++L + +E I +
Sbjct: 148 SAERLVEIAESRFPSYFNAEEKLLLTSSKVHLYRELSCDEVLQRIESLEEEIISKG---- 203
Query: 139 PIRLIVIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV--- 194
++L++IDS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQ+
Sbjct: 204 -VKLVIIDSVASVVRKEFDTQLQGNLKERNRFLAREASSLKYLAEEFSIPVILTNQITTH 262
Query: 195 --------VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + L + C S + ALG W++ VN+RL L
Sbjct: 263 LSGALASQADLVSP---ADDLSLSEDTCGSSC---VTAALGNTWSHSVNTRLIL 310
>gi|379005517|ref|YP_005261189.1| DNA repair and recombination protein RadA [Pyrobaculum oguniense
TE7]
gi|375160970|gb|AFA40582.1| DNA repair and recombination protein RadA [Pyrobaculum oguniense
TE7]
Length = 333
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 119/227 (52%), Gaps = 23/227 (10%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D LGGGI ++TE+V E GSGKTQ C QL + QLP GGL A ++Y+
Sbjct: 101 RISTGVRSLDELLGGGIETRAVTEVVGEFGSGKTQLCHQLAVMVQLPEERGGLGAKAIYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ R + + IF +S D + ++ +S +K +
Sbjct: 161 DTENTFRPERIMQMARA-RGLDPDQALNNIFYARAYSSDHQMILVEHAKSIVKQHN---- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
+ LIV+DS+ A FRS+F + +++ L ++ +L+ +A + +AV++TNQV +
Sbjct: 216 -VALIVVDSVIAHFRSEFPGRENLAERQQKLNKHVADLLR-LADAYDVAVVITNQV--MA 271
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+P+ + G P+ PA G A+ RL+L ++++
Sbjct: 272 QPD------------VFF--GNPLRPAGGNILAHGATYRLWLRKSKE 304
>gi|183227669|dbj|BAG24499.1| rad57 [Coprinopsis cinerea]
Length = 470
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 33/247 (13%)
Query: 18 EKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLY 77
E + G +D LGGGI + E+V ES +GK+Q LQL+L Q P GG+ ++ Y
Sbjct: 78 EVLSTGDAYLDHALGGGIRTGMVWEIVGESAAGKSQLALQLSLFVQNPPELGGIHGAACY 137
Query: 78 LHTEFPFPMRRLHQLSHTFRPSNDH---NPCDYIFVQSVHS------VDQLLDIMPKIES 128
L T P RL Q+ SN++ + CD V ++ + L++++P +
Sbjct: 138 LTTSSKLPTSRLSQMLQ----SNENLSKDSCDLAHVHTIRVNTTPMLTNVLMNLLP---N 190
Query: 129 FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAV 188
FI+ + P++L+VID++A LFRS + L RS +++ L A+A +AV
Sbjct: 191 FIQQQQTTSHPVKLLVIDALAELFRSTEKMSKTTLFDRSKELNQLALDLHALATRHNIAV 250
Query: 189 LVTNQVVDLMEPNEGVNGLRVGNLGCLYSS------------GRPICPA-LGIAWANCVN 235
+V N+V+D E G + G L +YS G A LG+ WAN VN
Sbjct: 251 VVLNEVIDRFE--RGRLSSKAGEL--VYSDQSRFFGTSSSVPGENTKEASLGLVWANAVN 306
Query: 236 SRLFLSR 242
+R+ +SR
Sbjct: 307 ARIMMSR 313
>gi|145592504|ref|YP_001154506.1| DNA repair and recombination protein RadA [Pyrobaculum arsenaticum
DSM 13514]
gi|166218765|sp|A4WN87.1|RADA_PYRAR RecName: Full=DNA repair and recombination protein RadA
gi|145284272|gb|ABP51854.1| DNA repair and recombination protein RadA [Pyrobaculum arsenaticum
DSM 13514]
Length = 333
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 119/227 (52%), Gaps = 23/227 (10%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D LGGGI ++TE+V E GSGKTQ C QL + QLP GGL A ++Y+
Sbjct: 101 RISTGVRSLDELLGGGIETRAVTEVVGEFGSGKTQLCHQLAVMVQLPEERGGLGAKAIYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ R + + IF +S D + ++ +S +K +
Sbjct: 161 DTENTFRPERIMQMARA-RGLDPDQALNNIFYARAYSSDHQMILVEHAKSIVKQHN---- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
+ LIV+DS+ A FRS+F + +++ L ++ +L+ +A + +AV++TNQV +
Sbjct: 216 -VALIVVDSVIAHFRSEFPGRENLAERQQKLNKHVADLLR-LADAYDVAVVITNQV--MA 271
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+P+ + G P+ PA G A+ RL+L ++++
Sbjct: 272 QPD------------VFF--GNPLRPAGGNILAHGATYRLWLRKSKE 304
>gi|345491182|ref|XP_003426545.1| PREDICTED: DNA repair protein XRCC3 [Nasonia vitripennis]
Length = 252
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 135/290 (46%), Gaps = 64/290 (22%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSH---GGLSASSLY 77
+ GC +D L GG+P IT++ ESG+GKTQ LQ LSAQ+P + GG++ Y
Sbjct: 13 STGCSKLDSFLRGGLPRKGITQIYGESGTGKTQLALQFCLSAQIPKNSTDVGGVA----Y 68
Query: 78 LHTEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNS 136
+ TE FP RLH+L D+ + IF++ + + + L D + + +
Sbjct: 69 ICTEAAFPSSRLHELFKKSPLVKDYAISNEKIFIEHISNTEGLEDCIFQPD--------- 119
Query: 137 RLP-------IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVL 189
RLP I+L++IDSIAA +R ++D + ++K R+ K+ L+ ++ +AV+
Sbjct: 120 RLPTLLSMHKIKLLIIDSIAATYRVEYD--LMNVKSRAKSLRKVGYQLQKLSKIHEMAVV 177
Query: 190 VTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVR 249
NQV +M N NL C P+LGI WA+ V + +L +
Sbjct: 178 CINQVTAMMGNN------YTENLSCKEQ------PSLGITWASMVTNSFYLYK------- 218
Query: 250 ENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFG 299
+ RR L + +P+L + E+EI G+ G
Sbjct: 219 -------------------KFNRRYLFITGSPYLPRKNIEYEIIESGIIG 249
>gi|395746014|ref|XP_003778373.1| PREDICTED: DNA repair protein RAD51 homolog 2 isoform 2 [Pongo
abelii]
Length = 384
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 123/229 (53%), Gaps = 23/229 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEVTGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + PS + + S VH +L +++ +IES + + I+L+
Sbjct: 150 ERLVEIAESRFPSYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK--GIKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
++DS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQV
Sbjct: 208 ILDSVASVVRKEFDTQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQVTTHLSGAL 267
Query: 195 ---VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G + ALG W++ VN+RL L
Sbjct: 268 ASQADLVSPADDLS-LSEGTSG-----SSCVIAALGNTWSHSVNTRLIL 310
>gi|299753890|ref|XP_001833605.2| Rad51B protein [Coprinopsis cinerea okayama7#130]
gi|298410510|gb|EAU88150.2| Rad51B protein [Coprinopsis cinerea okayama7#130]
Length = 451
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 33/247 (13%)
Query: 18 EKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLY 77
E + G +D LGGGI + E+V ES +GK+Q LQL+L Q P GG+ ++ Y
Sbjct: 59 EVLSTGDAYLDHALGGGIRTGMVWEIVGESAAGKSQLALQLSLFVQNPPELGGIHGAACY 118
Query: 78 LHTEFPFPMRRLHQLSHTFRPSNDH---NPCDYIFVQSVHS------VDQLLDIMPKIES 128
L T P RL Q+ SN++ + CD V ++ + L++++P +
Sbjct: 119 LTTSSKLPTSRLSQMLQ----SNENLSKDSCDLAHVHTIRVNTTPMLTNVLMNLLP---N 171
Query: 129 FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAV 188
FI+ + P++L+VID++A LFRS + L RS +++ L A+A +AV
Sbjct: 172 FIQQQQTTSHPVKLLVIDALAELFRSTEKMSKTTLFDRSKELNQLALDLHALATRHNIAV 231
Query: 189 LVTNQVVDLMEPNEGVNGLRVGNLGCLYSS------------GRPICPA-LGIAWANCVN 235
+V N+V+D E G + G L +YS G A LG+ WAN VN
Sbjct: 232 VVLNEVIDRFE--RGRLSSKAGEL--VYSDQSRFFGTSSSVPGENTKEASLGLVWANAVN 287
Query: 236 SRLFLSR 242
+R+ +SR
Sbjct: 288 ARIMMSR 294
>gi|209946400|gb|ACI97431.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 131/283 (46%), Gaps = 50/283 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGG+ ITEL +G GKTQ LQL+L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYI 146
Query: 79 HTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL Q+S P + N IFV++ + LL ++ +I ++
Sbjct: 147 CTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR +D +R+ +++ L + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
G+ P LG+ WA+ +RL +SR V ++++M
Sbjct: 257 AT--------------------RDGQDEIPCLGLQWAHLGRTRLRVSR----VPKQHRMG 292
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ + T R L ++++P + E IT +GV
Sbjct: 293 DQLI------------TVRKLEILYSPETPNDXXEXXITADGV 323
>gi|209946378|gb|ACI97420.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 130/283 (45%), Gaps = 50/283 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGG+ ITEL +G GKTQ LQL+L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYI 146
Query: 79 HTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL Q+S P + N IFV++ + LL ++ +I ++
Sbjct: 147 CTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR +D +R+ +++ + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYNDYLERARHMRRLADAXXSYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
G+ P LG+ WA+ +RL +SR V ++++M
Sbjct: 257 AT--------------------RDGQDEIPCLGLQWAHLGRTRLRVSR----VPKQHRMG 292
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ + T R L ++++P + E IT EGV
Sbjct: 293 DQLI------------TVRKLEILYSPETPNDFAEXXITAEGV 323
>gi|159041684|ref|YP_001540936.1| DNA repair and recombination protein RadA [Caldivirga
maquilingensis IC-167]
gi|157920519|gb|ABW01946.1| DNA repair and recombination protein RadA [Caldivirga
maquilingensis IC-167]
Length = 358
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 137/297 (46%), Gaps = 48/297 (16%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T + + + + G +D LGGGI +ITEL E GSGKT FC QL++ QL
Sbjct: 108 VTALEVYERKRNVQYISTGVKALDELLGGGIETRAITELAGEFGSGKTNFCHQLSVMVQL 167
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMP 124
P GGL +L++ TE F R+ Q++ +R + IF ++ D + I+
Sbjct: 168 PEDKGGLKGKALFIDTENTFRPERIVQIAK-YRGLDPKEALKNIFYARAYNSDHQMLIID 226
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
+ + I + IRLIVIDS+ A FRS++ + +++ L I+ +LK +A +
Sbjct: 227 EAKKIIPKEN-----IRLIVIDSLVAHFRSEYPGRENLAERQQKLNHHIAQLLK-LADIY 280
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
AV+VTNQV+ +P+ + GN P+ PA G A+ R++L +
Sbjct: 281 NAAVVVTNQVI--AQPD-----MFFGN---------PLKPAGGNVIAHGATYRIWLRK-- 322
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G E+ R ++ +P ++ F+IT EG+ E
Sbjct: 323 -----------------GKENI------RVARILDSPMHPESEATFKITEEGLIDGE 356
>gi|209946368|gb|ACI97415.1| spindle B [Drosophila melanogaster]
gi|209946390|gb|ACI97426.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 130/282 (46%), Gaps = 50/282 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGG+ ITEL +G GKTQ LQL+L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYI 146
Query: 79 HTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL Q+S P + N IFV++ + LL ++ +I ++
Sbjct: 147 CTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR +D +R+ +++ L + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
G+ P LG+ WA+ +RL +SR V ++++M
Sbjct: 257 AT--------------------RDGQDEIPCLGLQWAHLGRTRLRVSR----VPKQHRMG 292
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREG 296
+ + T R L ++++P + E IT EG
Sbjct: 293 DQLI------------TVRKLEILYSPETPNDFAEXXITAEG 322
>gi|374327612|ref|YP_005085812.1| protein RadA [Pyrobaculum sp. 1860]
gi|356642881|gb|AET33560.1| RadA [Pyrobaculum sp. 1860]
Length = 333
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 119/227 (52%), Gaps = 23/227 (10%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D LGGG+ ++TE+V E GSGKTQ C QL + QLP GGL A ++Y+
Sbjct: 101 RISTGVRALDELLGGGVETRAVTEVVGEFGSGKTQLCHQLAVMVQLPEDRGGLGAKAIYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ R + IF +S D + ++ + +S IK +
Sbjct: 161 DTENTFRPERIMQIAKA-RGLDPDQALHNIFYARAYSSDHQMILVDQAKSIIKQHN---- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
+ L+V+DS+ A FRS+F + +++ L ++ +L+ +A + +AV++TNQV +
Sbjct: 216 -VALLVVDSVIAHFRSEFPGRENLAERQQKLNKHVADLLR-LADAYDVAVVITNQV--MA 271
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+P+ + G P+ PA G A+ RL+L ++++
Sbjct: 272 QPD------------VFF--GNPLRPAGGNILAHGATYRLWLRKSKE 304
>gi|426233576|ref|XP_004010792.1| PREDICTED: DNA repair protein RAD51 homolog 2 [Ovis aries]
Length = 350
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 131/262 (50%), Gaps = 41/262 (15%)
Query: 7 PQNLLDNPLTTEKC--------TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQL 58
PQ + T++C + P +D L GG+ C S+TE+ G GKTQFC+ +
Sbjct: 62 PQMQTAYEIKTQRCAAHSSAFLSTTLPALDEALHGGVACGSLTEITGPPGCGKTQFCIMM 121
Query: 59 TLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQS-VH--- 114
++ A LP++ GGL + +Y+ TE F RL +++ + P + S VH
Sbjct: 122 SILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFDTEEKLLLTSSKVHLYR 181
Query: 115 --SVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD-DLKKRSFLFF 171
S D++L + +E I + ++L++IDS+A++ R +FD + ++++R+
Sbjct: 182 ELSCDEVLQRIESLEEEIISKG-----VKLVIIDSVASVVRKEFDTQLQGNVRERNKFLA 236
Query: 172 KISGMLKAMAVGFGLAVLVTNQV-----------VDLMEPNEGVNGLRVGN--LGCLYSS 218
+ + LK +A F + V++TNQ+ DL+ P + ++ L G GCL +
Sbjct: 237 REAASLKYLAEEFSIPVILTNQITTHLSGALASQADLVSPADDLS-LSEGTSRSGCLTA- 294
Query: 219 GRPICPALGIAWANCVNSRLFL 240
ALG W++ VN+RL L
Sbjct: 295 ------ALGNTWSHSVNTRLIL 310
>gi|291406479|ref|XP_002719601.1| PREDICTED: RAD51-like 1 [Oryctolagus cuniculus]
Length = 344
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 128/258 (49%), Gaps = 33/258 (12%)
Query: 7 PQNLLDNPLTTEKCTV--------GCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQL 58
PQ + T++C P +D L GG+ C S+TE+ G GKTQFC+ +
Sbjct: 62 PQMKTAYAMKTQRCAALSPAFLPTSLPALDEALRGGVACGSLTEITGPPGCGKTQFCIMM 121
Query: 59 TLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVD 117
++ A LP+ GGL + +Y+ TE F RL +++ + P + + S VH
Sbjct: 122 SILATLPTDMGGLEGAVVYIDTESAFSAERLIEIAESRFPRYFNTEEKLLLTSSKVHLYR 181
Query: 118 QLL--DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD-DLKKRSFLFFKIS 174
+L ++M +IES ++ + ++L++IDS+A++ R +FD + ++K+R+ + +
Sbjct: 182 ELSCDEVMQRIESLEEDIISK--GVKLVIIDSVASVVRKEFDTQLQGNMKERNKFLAREA 239
Query: 175 GMLKAMAVGFGLAVLVTNQV-----------VDLMEP-NEGVNGLRVGNLGCLYSSGRPI 222
+LK +A F + V++TNQ+ DL+ P ++ C +
Sbjct: 240 SLLKYVAEEFSIPVILTNQITTHLSGALTSQADLVSPADDLSLSEGSSGSSC-------V 292
Query: 223 CPALGIAWANCVNSRLFL 240
ALG W++ VN+RL L
Sbjct: 293 TAALGNTWSHNVNTRLIL 310
>gi|352682863|ref|YP_004893387.1| DNA repair protein [Thermoproteus tenax Kra 1]
gi|350275662|emb|CCC82309.1| DNA repair protein [Thermoproteus tenax Kra 1]
Length = 382
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 120/231 (51%), Gaps = 23/231 (9%)
Query: 15 LTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSAS 74
+ ++ + G +D L GG+ +++TE+ E G+GKTQFC QL + QLP GGLSA
Sbjct: 146 VNIKRISTGVRSLDELLNGGVETSAVTEVAGEFGAGKTQFCHQLAVMVQLPEDKGGLSAK 205
Query: 75 SLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSS 134
++Y+ TE F R+ Q++ R + I+ +S D + + + IK +
Sbjct: 206 AIYIDTENTFRPERIAQIARA-RGLDPDQALKNIYYARAYSSDHQMILAEQARRIIKQDN 264
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
++L+V+DSI A FR++F + +++ L I+ +LK +A + +AV+VTNQV
Sbjct: 265 -----VKLLVVDSIVAHFRAEFPGRENLAERQQKLNKHIADLLK-IADAYDVAVVVTNQV 318
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+ +P+ + G P+ PA G A+ R++L ++++
Sbjct: 319 --MAQPD------------VFF--GNPLKPAGGNVLAHGATYRIWLRKSKE 353
>gi|302348270|ref|YP_003815908.1| DNA repair and recombination protein radA [Acidilobus
saccharovorans 345-15]
gi|302328682|gb|ADL18877.1| DNA repair and recombination protein radA [Acidilobus
saccharovorans 345-15]
Length = 326
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 129/302 (42%), Gaps = 60/302 (19%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T L ++ K T G +D LGGGI ITE E G+GKTQ C QL+++ QLP
Sbjct: 77 TALELKKERMSVRKITTGSKALDDLLGGGIETKQITEFFGEFGTGKTQICHQLSVNVQLP 136
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHS------VDQL 119
GGL+ ++Y+ TE F R+ Q++ D + ++++++S VDQL
Sbjct: 137 EDKGGLNGKAVYIDTEGTFRWERIEQMARGLGLDPDKVMDNIYWIRAINSHHQMAIVDQL 196
Query: 120 LDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKA 179
D++ K IRL+V+DS+ + FR++F ++L R L + L
Sbjct: 197 FDMLDKDN------------IRLVVVDSLTSHFRAEFPG-RENLAARQQLLNRHLHQLMR 243
Query: 180 MAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLF 239
+A + +AV+VTNQV + P+ Y G P G A+ R+
Sbjct: 244 LAEVYDVAVVVTNQV--MARPD------------VFY--GDPTAAVGGNVVAHAPGIRVQ 287
Query: 240 LSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFG 299
L + R +R +V APHL + F IT GV
Sbjct: 288 LKK-------------------------SRNNKRIARIVDAPHLPEGETVFAITEYGVRD 322
Query: 300 VE 301
E
Sbjct: 323 AE 324
>gi|363734477|ref|XP_001232262.2| PREDICTED: DNA repair protein RAD51 homolog 2 [Gallus gallus]
Length = 371
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 127/239 (53%), Gaps = 19/239 (7%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D+ L GGIPC S+TEL + G GKTQFC+ +++ A LP S GGL + +Y+ TE F
Sbjct: 107 LDKVLHGGIPCGSLTELTSPPGCGKTQFCITMSVLATLPVSMGGLDGAVIYIDTESAFSA 166
Query: 87 RRLHQLSHTFRPSN-DHNPCDYIFVQSVHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ P+ D + + +S+H +L ++ +I+S I+LI
Sbjct: 167 ERLIEIAGNRFPTYFDSDEKLFCMTRSIHLYRELTCDSVLKRIKSL--EEEIISKKIKLI 224
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
+IDS+A++ R +FD + +L +RS + + +LK +A F + V++TNQ+
Sbjct: 225 IIDSVASVVRKEFDTKLQGNLAERSNFLARGASLLKYVAEEFSIPVILTNQITTSLSNGL 284
Query: 195 ---VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRE 250
DL+ P ++ L G G + ALG W++ VN+RL L + D + R+
Sbjct: 285 AIPADLVSPAHDLS-LSEGASGSGKKESACVTAALGNTWSHSVNTRLIL-QYHDLLTRQ 341
>gi|332228955|ref|XP_003263652.1| PREDICTED: DNA repair protein RAD51 homolog 2 isoform 4 [Nomascus
leucogenys]
Length = 401
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 122/229 (53%), Gaps = 23/229 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L +++ +IES + + I+L+
Sbjct: 150 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK--GIKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
++DS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQ+
Sbjct: 208 ILDSVASVVRKEFDTQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGAL 267
Query: 195 ---VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G + ALG W++ VN+RL L
Sbjct: 268 ASQADLVSPADDLS-LSEGTSG-----SSCVIAALGNTWSHSVNTRLIL 310
>gi|332228951|ref|XP_003263650.1| PREDICTED: DNA repair protein RAD51 homolog 2 isoform 2 [Nomascus
leucogenys]
Length = 350
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 122/229 (53%), Gaps = 23/229 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L +++ +IES + + I+L+
Sbjct: 150 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK--GIKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
++DS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQ+
Sbjct: 208 ILDSVASVVRKEFDTQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGAL 267
Query: 195 ---VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G + ALG W++ VN+RL L
Sbjct: 268 ASQADLVSPADDLS-LSEGTSG-----SSCVIAALGNTWSHSVNTRLIL 310
>gi|332228953|ref|XP_003263651.1| PREDICTED: DNA repair protein RAD51 homolog 2 isoform 3 [Nomascus
leucogenys]
Length = 350
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 122/229 (53%), Gaps = 23/229 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L +++ +IES + + I+L+
Sbjct: 150 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK--GIKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
++DS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQ+
Sbjct: 208 ILDSVASVVRKEFDTQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGAL 267
Query: 195 ---VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G + ALG W++ VN+RL L
Sbjct: 268 ASQADLVSPADDLS-LSEGTSG-----SSCVIAALGNTWSHSVNTRLIL 310
>gi|350408492|ref|XP_003488421.1| PREDICTED: DNA repair protein XRCC3-like [Bombus impatiens]
Length = 254
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 131/286 (45%), Gaps = 55/286 (19%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T GCP D L GGI IT++ + +GKTQ LQL L+ QLP++ GG +A ++Y+ T
Sbjct: 19 TTGCPKFDTLLQGGITTRGITQIYGAASTGKTQLALQLCLTVQLPTTEGGFAAGAVYICT 78
Query: 81 EFPFPMRRLHQLSHTFRPSNDHN-PCDYIFVQSVHSVDQ----LLDIMPKIESFIKNSSN 135
E FP RRL +L + + D +FV+ + ++++ LL +P + S K
Sbjct: 79 ECTFPSRRLQELIQKLEITKKYGINGDSVFVEHISTIEELEICLLHRIPILMSVQK---- 134
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
I LI+IDSIAA +R ++ D+ KR I L + + V+ NQV
Sbjct: 135 ----IGLIIIDSIAAPYR--VEDWKDESNKRGKSLRTIGQQLHKLCKN-DICVVCINQVT 187
Query: 196 DLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVN 255
+M GN+ YSS R P+LGI W + + + + R
Sbjct: 188 AIMH----------GNISSDYSSVR---PSLGITWLSMITNSIQFYR------------- 221
Query: 256 GGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G+ + C V + +L++T+ FEI GV ++
Sbjct: 222 -----MGTMRYAC--------VKLSSNLSETTISFEIQGYGVKAID 254
>gi|348573117|ref|XP_003472338.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Cavia
porcellus]
Length = 440
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 121/229 (52%), Gaps = 23/229 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GGI C S+TE+ G GKTQFC+ +++ A LP + GGL + +Y+ TE F
Sbjct: 90 LDEALHGGIACGSLTEITGPPGCGKTQFCMMMSVLATLPPNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLL---DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + + V + L ++ +IES + + R ++++
Sbjct: 150 ERLIEIAESRFPRYFNTEEKLLLTSTKVYVYRELTCEKVLQRIESLEEEIISKR--VKVV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
+IDSIA++ R +FD + ++K+R+ K + +LK +A F + V++TNQ+
Sbjct: 208 IIDSIASVVRKEFDTQLQGNMKERNKFLAKGASLLKYLAEEFSIPVILTNQITTHLSGAL 267
Query: 195 ---VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G + ALG W++ VN+RL L
Sbjct: 268 ASQADLVSPADDLS-LSEGTSG-----SSCVIAALGNTWSHSVNTRLIL 310
>gi|326920616|ref|XP_003206565.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Meleagris
gallopavo]
Length = 496
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 130/245 (53%), Gaps = 31/245 (12%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D+ L GGIPC S+TEL + G GKTQFC+ +++ A LP S GGL + +Y+ TE F
Sbjct: 90 LDKVLHGGIPCGSLTELTSPPGCGKTQFCITMSVLATLPVSMGGLDGAVIYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSN-DHNPCDYIFVQSVHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ P+ D + + +SVH +L ++ +I S + + + I+LI
Sbjct: 150 ERLIEIAGNRFPTYFDSDEKLFCMTRSVHLYRELTCDSVLKRIRSLEEEIISKK--IKLI 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
+IDS+A++ R +FD + +L +RS + + +LK +A F + V++TNQ+
Sbjct: 208 IIDSVASVVRKEFDTKLQGNLAERSNFLARGASLLKYLAEEFSIPVILTNQITTSLSNGL 267
Query: 195 ---VDLMEP------NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
DL+ P +EG +G C + ALG W++ VN+RL L + D
Sbjct: 268 AIPADLVSPAYDLSLSEGASGSGKRESAC-------VTAALGNTWSHSVNTRLIL-QYHD 319
Query: 246 FVVRE 250
+ R+
Sbjct: 320 LLTRQ 324
>gi|156062294|ref|XP_001597069.1| hypothetical protein SS1G_01263 [Sclerotinia sclerotiorum 1980]
gi|154696599|gb|EDN96337.1| hypothetical protein SS1G_01263 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 493
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 107/184 (58%), Gaps = 25/184 (13%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+DR LGGGIP ITE+ ESG+GKTQF L L LSAQLP+ + GL+A +LY+ TE P
Sbjct: 116 MDRALGGGIPTGYITEITGESGAGKTQFLLTLLLSAQLPAPY-GLTAPTLYISTESSLPT 174
Query: 87 RRLHQL--SHTFRPSNDHNPCDYIFVQSVHSVDQLLDIM-PKIES------FIKNSSNSR 137
RL Q+ +H S+ P S+D+++ I+ P +ES F + R
Sbjct: 175 TRLSQILRTHPLLASHPSPP----------SLDKIISIVTPDLESQDHILRFQVPVAIKR 224
Query: 138 LPIRLIVIDSIAALFRSDFD-----NTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTN 192
IRL+++DS+AA +R++F+ ++ +RS K+ +L+ +A FG+A++V N
Sbjct: 225 HGIRLLILDSVAANYRAEFERPGMTKGGGNMAQRSAELVKLGQLLRDLAREFGVAIVVAN 284
Query: 193 QVVD 196
QV D
Sbjct: 285 QVAD 288
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 216 YSSGRPI-CPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRS 274
Y+S + I P+LG+ W + R+ L + + NQ+V G G + V R+ RR
Sbjct: 382 YTSSKNIKTPSLGLIWTTQIACRIALIKKPIYGQARNQIVEEGERG----ELVLRKWRRW 437
Query: 275 LHVVFAPHLA------DTSCEFEITREGVFGV 300
+ +VFA D EF + EG+F V
Sbjct: 438 MKIVFAGWARECGEGLDGCVEFVVRGEGLFAV 469
>gi|119601365|gb|EAW80959.1| RAD51-like 1 (S. cerevisiae), isoform CRA_b [Homo sapiens]
Length = 420
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 122/229 (53%), Gaps = 23/229 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L +++ +IES + + I+L+
Sbjct: 150 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK--GIKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
++DS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQ+
Sbjct: 208 ILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGAL 267
Query: 195 ---VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G + ALG W++ VN+RL L
Sbjct: 268 ASQADLVSPADDLS-LSEGTSG-----SSCVIAALGNTWSHSVNTRLIL 310
>gi|119872227|ref|YP_930234.1| DNA repair and recombination protein RadA [Pyrobaculum islandicum
DSM 4184]
gi|143811446|sp|Q9UWR5.2|RADA_PYRIL RecName: Full=DNA repair and recombination protein RadA
gi|119673635|gb|ABL87891.1| DNA repair and recombination protein RadA [Pyrobaculum islandicum
DSM 4184]
Length = 330
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 119/227 (52%), Gaps = 23/227 (10%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D LGGGI ++TE+ E GSGKTQ C QL + QLP GGL A ++Y+
Sbjct: 98 RISTGVRALDELLGGGIETRAVTEVAGEFGSGKTQLCHQLAVMVQLPEERGGLGAKAIYI 157
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ R + + IF +S D + ++ + +S I+ +
Sbjct: 158 DTENTFRPERIMQIAKA-RGLDPDQALNNIFYARAYSSDHQMILVDQAKSIIRQHN---- 212
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
+ L+++DS+ A FRS+F + +++ L ++ +L+ +A + +AV++TNQV +
Sbjct: 213 -VALLIVDSVIAHFRSEFPGRENLAERQQKLNKHVADLLR-LADAYDVAVVITNQV--MA 268
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+P+ + G P+ PA G A+ RL+L ++++
Sbjct: 269 QPD------------VFF--GNPLRPAGGNILAHGATYRLWLRKSKE 301
>gi|19924117|ref|NP_598194.1| DNA repair protein RAD51 homolog 2 isoform 2 [Homo sapiens]
gi|3005963|emb|CAA75680.1| R51H2 [Homo sapiens]
gi|73808274|gb|AAZ85144.1| RAD51-like 1 (S. cerevisiae) [Homo sapiens]
Length = 350
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 122/229 (53%), Gaps = 23/229 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L +++ +IES + + I+L+
Sbjct: 150 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK--GIKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
++DS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQ+
Sbjct: 208 ILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGAL 267
Query: 195 ---VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G + ALG W++ VN+RL L
Sbjct: 268 ASQADLVSPADDLS-LSEGTSG-----SSCVIAALGNTWSHSVNTRLIL 310
>gi|10835029|ref|NP_002868.1| DNA repair protein RAD51 homolog 2 isoform 1 [Homo sapiens]
gi|397507279|ref|XP_003824129.1| PREDICTED: DNA repair protein RAD51 homolog 2 [Pan paniscus]
gi|2262209|gb|AAB63358.1| RecA-like protein [Homo sapiens]
gi|2801405|gb|AAC39723.1| DNA repair protein RAD51B [Homo sapiens]
gi|49168604|emb|CAG38797.1| RAD51L1 [Homo sapiens]
gi|60819388|gb|AAX36498.1| RAD51-like 1 [synthetic construct]
gi|61363118|gb|AAX42338.1| RAD51-like 1 [synthetic construct]
gi|119601363|gb|EAW80957.1| RAD51-like 1 (S. cerevisiae), isoform CRA_a [Homo sapiens]
gi|119601364|gb|EAW80958.1| RAD51-like 1 (S. cerevisiae), isoform CRA_a [Homo sapiens]
gi|410221126|gb|JAA07782.1| RAD51-like 1 [Pan troglodytes]
gi|410247166|gb|JAA11550.1| RAD51-like 1 [Pan troglodytes]
gi|410296250|gb|JAA26725.1| RAD51-like 1 [Pan troglodytes]
gi|410335225|gb|JAA36559.1| RAD51-like 1 [Pan troglodytes]
Length = 350
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 122/229 (53%), Gaps = 23/229 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L +++ +IES + + I+L+
Sbjct: 150 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK--GIKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
++DS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQ+
Sbjct: 208 ILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGAL 267
Query: 195 ---VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G + ALG W++ VN+RL L
Sbjct: 268 ASQADLVSPADDLS-LSEGTSG-----SSCVIAALGNTWSHSVNTRLIL 310
>gi|114653599|ref|XP_001138853.1| PREDICTED: DNA repair protein RAD51 homolog 2 isoform 3 [Pan
troglodytes]
Length = 346
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 122/229 (53%), Gaps = 23/229 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L +++ +IES + + I+L+
Sbjct: 150 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK--GIKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
++DS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQ+
Sbjct: 208 ILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGAL 267
Query: 195 ---VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G + ALG W++ VN+RL L
Sbjct: 268 ASQADLVSPADDLS-LSEGTSG-----SSCVIAALGNTWSHSVNTRLIL 310
>gi|114653601|ref|XP_001138758.1| PREDICTED: DNA repair protein RAD51 homolog 2 isoform 2 [Pan
troglodytes]
Length = 350
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 122/229 (53%), Gaps = 23/229 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L +++ +IES + + I+L+
Sbjct: 150 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK--GIKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
++DS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQ+
Sbjct: 208 ILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGAL 267
Query: 195 ---VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G + ALG W++ VN+RL L
Sbjct: 268 ASQADLVSPADDLS-LSEGTSG-----SSCVIAALGNTWSHSVNTRLIL 310
>gi|332842559|ref|XP_003314455.1| PREDICTED: DNA repair protein RAD51 homolog 2 [Pan troglodytes]
Length = 366
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 122/229 (53%), Gaps = 23/229 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L +++ +IES + + I+L+
Sbjct: 150 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK--GIKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
++DS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQ+
Sbjct: 208 ILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGAL 267
Query: 195 ---VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G + ALG W++ VN+RL L
Sbjct: 268 ASQADLVSPADDLS-LSEGTSG-----SSCVIAALGNTWSHSVNTRLIL 310
>gi|28193230|emb|CAD62357.1| unnamed protein product [Homo sapiens]
Length = 375
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 122/229 (53%), Gaps = 23/229 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 99 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 158
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L +++ +IES + + I+L+
Sbjct: 159 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK--GIKLV 216
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
++DS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQ+
Sbjct: 217 ILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGAL 276
Query: 195 ---VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G + ALG W++ VN+RL L
Sbjct: 277 ASQADLVSPADDLS-LSEGTSG-----SSCVIAALGNTWSHSVNTRLIL 319
>gi|60830799|gb|AAX36945.1| RAD51-like 1 [synthetic construct]
Length = 351
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 122/229 (53%), Gaps = 23/229 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L +++ +IES + + I+L+
Sbjct: 150 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK--GIKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
++DS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQ+
Sbjct: 208 ILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGAL 267
Query: 195 ---VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G + ALG W++ VN+RL L
Sbjct: 268 ASQADLVSPADDLS-LSEGTSG-----SSCVIAALGNTWSHSVNTRLIL 310
>gi|327311698|ref|YP_004338595.1| DNA repair and recombination protein RadA [Thermoproteus uzoniensis
768-20]
gi|326948177|gb|AEA13283.1| DNA repair and recombination protein RadA [Thermoproteus uzoniensis
768-20]
Length = 337
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 120/231 (51%), Gaps = 23/231 (9%)
Query: 15 LTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSAS 74
+ ++ + G +D L GG+ ++TE+ E G+GKTQFC QL + QLP GGL+A
Sbjct: 101 VNIKRISTGVRSLDELLNGGVETGAVTEVAGEFGAGKTQFCHQLAVMVQLPEDRGGLNAK 160
Query: 75 SLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSS 134
++Y+ TE F R+ Q++ R + I+ +S D + ++ + IK +
Sbjct: 161 AIYIDTENTFRPERITQMARA-RGLDPDQALKNIYYARAYSSDHQMILVEQARRIIKQDN 219
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
++L+V+DSI A FR++F + +++ L I+ +LK +A + +AV+VTNQV
Sbjct: 220 -----VKLLVVDSIVAHFRAEFPGRENLAERQQKLNKHIADLLK-IADAYDVAVVVTNQV 273
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+ +P+ + G P+ PA G A+ R++L ++++
Sbjct: 274 --MAQPD------------VFF--GNPLRPAGGNVLAHGATYRIWLRKSKE 308
>gi|297298124|ref|XP_001108071.2| PREDICTED: DNA repair protein RAD51 homolog 2 isoform 2 [Macaca
mulatta]
Length = 523
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 121/229 (52%), Gaps = 23/229 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP+ GGL + +Y+ TE F
Sbjct: 242 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTHMGGLEGAVVYIDTESAFSA 301
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L +++ +IES + + I+L+
Sbjct: 302 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK--GIKLV 359
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
+IDS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQ+
Sbjct: 360 IIDSVASVVRKEFDTQLQGNLKERNKFLAREACSLKYLAEEFSIPVILTNQITTHLSGAL 419
Query: 195 ---VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G + ALG W++ VN+RL L
Sbjct: 420 ASQADLVSPTDDLS-LSEGTSG-----SSCVIAALGNTWSHSVNTRLIL 462
>gi|46255039|ref|NP_598193.2| DNA repair protein RAD51 homolog 2 isoform 3 [Homo sapiens]
gi|38258892|sp|O15315.2|RA51B_HUMAN RecName: Full=DNA repair protein RAD51 homolog 2; Short=R51H2;
AltName: Full=RAD51 homolog B; Short=Rad51B; AltName:
Full=RAD51-like protein 1
gi|20987416|gb|AAH30219.1| RAD51-like 1 (S. cerevisiae) [Homo sapiens]
gi|61364588|gb|AAX42568.1| RAD51-like 1 [synthetic construct]
gi|123980046|gb|ABM81852.1| RAD51-like 1 (S. cerevisiae) [synthetic construct]
gi|123994811|gb|ABM85007.1| RAD51-like 1 (S. cerevisiae) [synthetic construct]
gi|261860168|dbj|BAI46606.1| RAD51-like 1 [synthetic construct]
Length = 384
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 122/229 (53%), Gaps = 23/229 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L +++ +IES + + I+L+
Sbjct: 150 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK--GIKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
++DS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQ+
Sbjct: 208 ILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGAL 267
Query: 195 ---VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G + ALG W++ VN+RL L
Sbjct: 268 ASQADLVSPADDLS-LSEGTSG-----SSCVIAALGNTWSHSVNTRLIL 310
>gi|358255195|dbj|GAA56912.1| DNA repair protein RAD51 homolog 3, partial [Clonorchis sinensis]
Length = 1681
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 119/248 (47%), Gaps = 38/248 (15%)
Query: 24 CPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFP 83
C D LGGG P +TEL E G GKTQFC+Q L+ QLP GGL ++++ +E
Sbjct: 1414 CRSFDEMLGGGFPTGRLTELCGEPGVGKTQFCIQTCLTVQLPRWFGGLEGEAVFIDSEGN 1473
Query: 84 FPMRRLHQLSHT---------------------FRPSNDHNPCDYIFVQSVHSVD----- 117
F RR Q++ + FR N + P + +H +
Sbjct: 1474 FVPRRAKQMAESLVTHCRRHVELDVDDEPLTKEFR--NHYCPNVDSLLSGIHYIRVTDHL 1531
Query: 118 QLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGML 177
QLL +++ F + +RL+V+DSIA FR DF DD+ +R+ L ++ L
Sbjct: 1532 QLLATCKRLQQFCEQHPK----VRLVVVDSIALPFRYDF----DDIPQRNRLLACVAQQL 1583
Query: 178 KAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSR 237
++A + V++TNQ+ +E + G+ S+GR + PALG +W + R
Sbjct: 1584 LSVATNYKAVVILTNQITTRIETRVKSDENPPGS-DYTSSTGR-LVPALGESWGHICAVR 1641
Query: 238 LFLSRNED 245
+FL+R+ D
Sbjct: 1642 IFLTRSSD 1649
>gi|19114539|ref|NP_593627.1| RecA family ATPase Rhp57 [Schizosaccharomyces pombe 972h-]
gi|20178063|sp|Q9UUL2.1|RAD57_SCHPO RecName: Full=DNA repair protein rhp57; AltName: Full=RAD57 homolog
gi|5821322|dbj|BAA83768.1| DNA repair protein Rhp57 [Schizosaccharomyces pombe]
gi|12038923|emb|CAC19737.1| RecA family ATPase Rhp57 [Schizosaccharomyces pombe]
Length = 354
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 125/254 (49%), Gaps = 27/254 (10%)
Query: 15 LTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSAS 74
+T++ T G +D L GGIP +TE+ ESGSGK+QFC+QL L QLP S GG++ +
Sbjct: 70 VTSKYLTTGDVKLDETLHGGIPVGQLTEICGESGSGKSQFCMQLCLMVQLPLSLGGMNKA 129
Query: 75 SLYLHTEFPFPMRRLHQLSHTF---RPSND------HNPCDYIFVQSVHSVDQLLDIMPK 125
++++ TE +RL +L+ P D NP D ++ ++ I+
Sbjct: 130 AVFISTESGLETKRLFELARYLPERYPKADKKDIIIKNPGDRVYTILCPDLESQEHIIQY 189
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFD--------NTMDDLKKRSFLFFKISGML 177
+ N R I L+++DS+A+ +R++ +D++ KR K++ L
Sbjct: 190 QLPILFN----RDKIGLVILDSVASNYRAELRYNRSKSHFRDLDNIAKRGNQLGKLAMTL 245
Query: 178 KAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSG------RPICPALGIAWA 231
+ +A AV++ NQV D + + GL + + SG P P+LG+ W
Sbjct: 246 RTLAHQHEAAVVIANQVSDRIPRDYDAIGLFSLDYQSQWFSGWDDTDPNPKIPSLGLVWT 305
Query: 232 NCVNSRLFLSRNED 245
N +++RL L + D
Sbjct: 306 NNISTRLALIKKTD 319
>gi|154319083|ref|XP_001558859.1| hypothetical protein BC1G_02493 [Botryotinia fuckeliana B05.10]
Length = 485
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 102/176 (57%), Gaps = 9/176 (5%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+DR LGGGIP ITE+ ESG+GKTQF L L LSAQLP+ H GL++ +LY+ TE P+
Sbjct: 116 MDRALGGGIPAGYITEVTGESGAGKTQFLLTLLLSAQLPAPH-GLASPTLYISTESSLPI 174
Query: 87 RRLHQLSHTFRPSNDH-NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVI 145
RL QL T H +P V S+ + D L+ I F + R IRL+++
Sbjct: 175 TRLSQLLRTHPLLASHPSPPSLDRVISISTPD--LESQDHILRFQVPVAIKRHGIRLLIL 232
Query: 146 DSIAALFRSDFD-----NTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
DS+AA +R++F+ ++ +RS K+ +L+ +A G+A++V NQV D
Sbjct: 233 DSVAANYRAEFERPGVTKGGGNMAQRSAELVKLGQLLRDLAREHGVAIVVANQVAD 288
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 216 YSSGRPI-CPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRS 274
Y+S + + P+LG+ W + R+ L + + N+++ G G + V +R RR
Sbjct: 384 YTSSKNVKTPSLGLIWTTQIACRIALIKKPVYGRARNEIMEEGERG----EPVLKRWRRW 439
Query: 275 LHVVFAPHLADT------SCEFEITREGVFGVE 301
+ +VFA ++ S EFEI EG+F V+
Sbjct: 440 MKIVFAGWAIESGEGLNGSVEFEIRGEGMFAVK 472
>gi|60810438|gb|AAX36146.1| RAD51-like 1 [synthetic construct]
Length = 385
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 122/229 (53%), Gaps = 23/229 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L +++ +IES + + I+L+
Sbjct: 150 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK--GIKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
++DS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQ+
Sbjct: 208 ILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGAL 267
Query: 195 ---VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G + ALG W++ VN+RL L
Sbjct: 268 ASQADLVSPADDLS-LSEGTSG-----SSCVIAALGNTWSHSVNTRLIL 310
>gi|256084116|ref|XP_002578278.1| DNA repair protein rad51 homolog 3 r51h3 [Schistosoma mansoni]
Length = 999
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 118/250 (47%), Gaps = 39/250 (15%)
Query: 24 CPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFP 83
C D LGGG P +TEL E G GKTQFCLQ ++ Q+P GL+ +L+L TE
Sbjct: 713 CRSFDDLLGGGFPTGRLTELCGEPGVGKTQFCLQACVNVQIPKWFSGLNGQALFLDTEGN 772
Query: 84 FPMRRLHQLS-----HTFRPSNDHNP--CDYIFVQS-----------VHSVD-----QLL 120
F R+ Q++ H R + NP D F++ +H + +LL
Sbjct: 773 FIPERVRQMASALADHCKRHYIESNPERTDESFIKQYCPTVESLMSGIHYIRITDHLKLL 832
Query: 121 DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAM 180
+ +E F + IRLIV+DSIA FR DF DD+ +R+ L ++ ML +
Sbjct: 833 AVCRHLEQF----CDQHPLIRLIVVDSIALPFRYDF----DDIPQRNRLLASVTQMLLCV 884
Query: 181 AVGFGLAVLVTNQVVDLMEPNE--------GVNGLRVGNLGCLYSSGRPICPALGIAWAN 232
A AV++TNQ+ + + G +VG C + PALG +W +
Sbjct: 885 AGRQKAAVILTNQITTKFDAKNLNSEQVDCVIEGDKVGKEQCRNDQNSCLVPALGDSWGH 944
Query: 233 CVNSRLFLSR 242
+ R+FL+R
Sbjct: 945 ICSLRVFLAR 954
>gi|28375587|emb|CAD66573.1| unnamed protein product [Homo sapiens]
Length = 394
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 122/229 (53%), Gaps = 23/229 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 100 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 159
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L +++ +IES + + I+L+
Sbjct: 160 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK--GIKLV 217
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
++DS+A++ R +FD + +LK+R+ + + LK +A F + V++TNQ+
Sbjct: 218 ILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITTHLSGAL 277
Query: 195 ---VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G + ALG W++ VN+RL L
Sbjct: 278 ASQADLVSPADDLS-LSEGTSG-----SSCVIAALGNTWSHSVNTRLIL 320
>gi|347832907|emb|CCD48604.1| hypothetical protein [Botryotinia fuckeliana]
Length = 523
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 102/176 (57%), Gaps = 9/176 (5%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+DR LGGGIP ITE+ ESG+GKTQF L L LSAQLP+ H GL++ +LY+ TE P+
Sbjct: 154 MDRALGGGIPAGYITEVTGESGAGKTQFLLTLLLSAQLPAPH-GLASPTLYISTESSLPI 212
Query: 87 RRLHQLSHTFRPSNDH-NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVI 145
RL QL T H +P V S+ + D L+ I F + R IRL+++
Sbjct: 213 TRLSQLLRTHPLLASHPSPPSLDRVISISTPD--LESQDHILRFQVPVAIKRHGIRLLIL 270
Query: 146 DSIAALFRSDFDNT-----MDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
DS+AA +R++F+ ++ +RS K+ +L+ +A G+A++V NQV D
Sbjct: 271 DSVAANYRAEFERPGVTKGGGNMAQRSAELVKLGQLLRDLAREHGVAIVVANQVAD 326
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 216 YSSGRPI-CPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRS 274
Y+S + + P+LG+ W + R+ L + + N+++ G G + V +R RR
Sbjct: 422 YTSSKNVKTPSLGLIWTTQIACRIALIKKPVYGRARNEIMEEGERG----EPVLKRWRRW 477
Query: 275 LHVVFAPHLADT------SCEFEITREGVFGVE 301
+ +VFA ++ S EFEI EG+F V+
Sbjct: 478 MKIVFAGWAIESGEGLNGSVEFEIRGEGMFAVK 510
>gi|397595013|gb|EJK56372.1| hypothetical protein THAOC_23755 [Thalassiosira oceanica]
Length = 396
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 123/266 (46%), Gaps = 41/266 (15%)
Query: 4 PMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQL-TLSA 62
P T ++L + K G +DR L GGIP SITE+ +G GKT QL TL+A
Sbjct: 97 PSTALSMLRRFNNSHKIPTGLTSLDRALQGGIPAGSITEVFGRAGVGKTHMTQQLCTLAA 156
Query: 63 QLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPC------DYIFVQSVHSV 116
+ GG S+++ TE + RL +++ S+ H + + + V S
Sbjct: 157 ---IAGGG----SIFIDTENKLSLPRLQEIAIERSASHQHPQTSASLIMENVSIHQVQST 209
Query: 117 DQLLDIMPKI-----------ESFIKNSSNS--RLPIRLIVIDSIAALFRSDFD----NT 159
+LLD + ++ ESF + S + LP+RLIVIDSIAA R D+D +
Sbjct: 210 KELLDRIDELRAEINHRNSLAESFQSSESGNIEGLPVRLIVIDSIAAPIRRDYDMMGAKS 269
Query: 160 MDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSG 219
+R+ F+I+ LK +A G+AV+ NQ V G G G
Sbjct: 270 GSVAAQRASAIFQIARRLKQLAYDHGIAVVAINQ----------VGGFARSQGGKDVGEG 319
Query: 220 RPICPALGIAWANCVNSRLFLSRNED 245
+LG AW CV++R+ L NED
Sbjct: 320 SEFTASLGTAWQYCVSTRIVLEHNED 345
>gi|209946360|gb|ACI97411.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 129/282 (45%), Gaps = 50/282 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGG+ ITEL +G GKTQ LQL+L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYI 146
Query: 79 HTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL Q+S P + N IFV++ + LL ++ +I ++
Sbjct: 147 CTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR +D +R+ +++ L + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
G+ P LG+ WA+ + L +SR V ++++M
Sbjct: 257 AT--------------------RDGQDEIPCLGLQWAHLGRTXLRVSR----VPKQHRMG 292
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREG 296
+ + T R L ++++P + E IT EG
Sbjct: 293 DQLI------------TVRKLEILYSPETPNDFAEXXITAEG 322
>gi|126465874|ref|YP_001040983.1| DNA repair and recombination protein RadA [Staphylothermus marinus
F1]
gi|126014697|gb|ABN70075.1| DNA repair and recombination protein RadA [Staphylothermus marinus
F1]
Length = 319
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 105/197 (53%), Gaps = 12/197 (6%)
Query: 15 LTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSAS 74
L+ K T G +D LGGGI +ITE E G+GKTQ C QL+++ QLP GGLS
Sbjct: 80 LSVRKITTGSKNLDDLLGGGIETKTITEFFGEYGTGKTQICHQLSVNVQLPPERGGLSGR 139
Query: 75 SLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSS 134
++Y+ TE F R+ ++ D + I+ Q ++ D + I+ ++ SF+ +
Sbjct: 140 AVYIDTEGTFRWERIEAMARGLGLDPD-EVMENIYYQRAYNSDHQIAIVEELFSFVPEHN 198
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
++L+VIDS+ + FR+++ ++L R K L +A + +AV+VTNQV
Sbjct: 199 -----VKLVVIDSVTSHFRAEYPG-RENLAARQQKLNKHLHQLVRLAEAYNIAVVVTNQV 252
Query: 195 V---DLM--EPNEGVNG 206
+ D+ +P + V G
Sbjct: 253 MARPDVFYGDPTQAVGG 269
>gi|15920489|ref|NP_376158.1| DNA repair and recombination protein RadA [Sulfolobus tokodaii str.
7]
gi|20139589|sp|Q975Y1.1|RADA_SULTO RecName: Full=DNA repair and recombination protein RadA
gi|15621272|dbj|BAB65267.1| DNA repair and recombination protein RadA [Sulfolobus tokodaii str.
7]
Length = 324
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 130/288 (45%), Gaps = 49/288 (17%)
Query: 15 LTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSAS 74
+ T+K T G +D LGGGI ++TEL E GSGKTQ C QL+++ QLP GGL
Sbjct: 84 INTKKITTGSQALDGLLGGGIETRTMTELFGEFGSGKTQLCHQLSVNVQLPLEKGGLGGK 143
Query: 75 SLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSS 134
++Y+ TE F R+ +S D + ++++++S D + I+ ++ I
Sbjct: 144 AVYIDTEGTFRWERIEAMSKAIGLEPDSAMNNIYYMRAINS-DHQMAIVDDLQELI---- 198
Query: 135 NSRLP-IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQ 193
S+ P I+L+++DS+ + FR++F ++L R K L +A + LAV++TNQ
Sbjct: 199 -SKDPAIKLVIVDSVTSHFRAEFPGR-ENLAVRQQKLNKHLHQLVRLAEMYDLAVIITNQ 256
Query: 194 VVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQM 253
V + P+ Y G P G + R+ L ++
Sbjct: 257 V--MARPD------------MFY--GDPTVAVGGHTLYHVPGIRVQLKKS---------- 290
Query: 254 VNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
R +R +V APHL + F IT EGV E
Sbjct: 291 ---------------RGNKRIARIVDAPHLPEGEVVFAITEEGVRDAE 323
>gi|353238085|emb|CCA70042.1| related to RAD57 protein [Piriformospora indica DSM 11827]
Length = 525
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 120/244 (49%), Gaps = 20/244 (8%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GGI ++TE+ ES SGKTQ LQL L AQLP + G+ + Y T
Sbjct: 78 TTGDDKLDKALRGGIRMGALTEIAGESASGKTQLALQLALMAQLPGAERGVDSGVAYFTT 137
Query: 81 EFPFPMRRLHQLSHT---FRPSNDHNPCDYIFVQSVHSVDQLLDIMP-KIESFIKNSSNS 136
P+RRL +L+ + R + + D + +V L+ ++ + + I + +S
Sbjct: 138 TSALPVRRLTELAKSHPLLRQKDAKSLTDNVHTCLTSTVPALISVLKHALSALIGQAEDS 197
Query: 137 RL--PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
PIR++++DS+ LF S T L +RS + I+ ML +A +A+++ NQ
Sbjct: 198 EKLRPIRVLILDSLGTLFHSMDKTTTVTLVERSKVLGDIAYMLHDLASRRNMAIIIVNQA 257
Query: 195 VDLMEPNEGVNGLRVGNLGC----------LYSSGRPICPA----LGIAWANCVNSRLFL 240
D+ ++ V+ + L+ + P+ LG+ WAN +N+R+ L
Sbjct: 258 SDVFSTSDDVSPSHEQDTEAPPVLLYKDQSLHFNRMPLVTTREAMLGLVWANQLNTRMML 317
Query: 241 SRNE 244
SR +
Sbjct: 318 SRTK 321
>gi|440897351|gb|ELR49062.1| DNA repair protein RAD51-like protein 2, partial [Bos grunniens
mutus]
Length = 373
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 122/234 (52%), Gaps = 33/234 (14%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VH-----SVDQLLDIMPKIESFIKNSSNSRLPI 140
RL +++ + P + S VH S D++L + +E I + +
Sbjct: 150 ERLVEIAESRFPRYFDTEEKLLLTSSKVHLYRELSCDEVLQRIESLEEEIISKG-----V 204
Query: 141 RLIVIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV----- 194
+L++IDS+A++ R +FD + ++++R+ + + LK +A F + V++TNQ+
Sbjct: 205 KLVIIDSVASVVRKEFDTQLQGNVRERNKFLAREAASLKYLAEEFSIPVILTNQITTHLS 264
Query: 195 ------VDLMEPNEGVNGLRVGNLG--CLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G CL + ALG W++ VN+RL L
Sbjct: 265 GALASQADLVSPADDLS-LSEGTSGSSCLTA-------ALGNTWSHSVNTRLIL 310
>gi|300797883|ref|NP_001180066.1| DNA repair protein RAD51 homolog 2 [Bos taurus]
gi|296483014|tpg|DAA25129.1| TPA: RAD51-like 1 isoform 1 [Bos taurus]
Length = 364
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 122/234 (52%), Gaps = 33/234 (14%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 104 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 163
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VH-----SVDQLLDIMPKIESFIKNSSNSRLPI 140
RL +++ + P + S VH S D++L + +E I + +
Sbjct: 164 ERLVEIAESRFPRYFDTEEKLLLTSSKVHLYRELSCDEVLQRIESLEEEIISKG-----V 218
Query: 141 RLIVIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV----- 194
+L++IDS+A++ R +FD + ++++R+ + + LK +A F + V++TNQ+
Sbjct: 219 KLVIIDSVASVVRKEFDTQLQGNVRERNKFLAREAASLKYLAEEFSIPVILTNQITTHLS 278
Query: 195 ------VDLMEPNEGVNGLRVGNLG--CLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G CL + ALG W++ VN+RL L
Sbjct: 279 GALASQADLVSPADDLS-LSEGTSGSSCLTA-------ALGNTWSHSVNTRLIL 324
>gi|344273519|ref|XP_003408569.1| PREDICTED: DNA repair protein RAD51 homolog 2 [Loxodonta africana]
Length = 386
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 120/229 (52%), Gaps = 23/229 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSVLATLPTNMGGLEGAVAYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L +++ +IES + + ++L+
Sbjct: 150 ERLVEIAESRFPEYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK--GVKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV------- 195
+IDS+A++ R +FD + ++K+RS + + LK +A F + V++TNQ+
Sbjct: 208 IIDSVASVVRKEFDTQLQGNMKERSKFLAREAASLKYLAEEFSIPVILTNQITTHLSRTL 267
Query: 196 ----DLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ S+ + ALG W++ VN+RL L
Sbjct: 268 ASQADLVSPADDLSPSEG------SSASSCVTAALGNTWSHSVNTRLIL 310
>gi|297527452|ref|YP_003669476.1| DNA repair and recombination protein RadA [Staphylothermus
hellenicus DSM 12710]
gi|297256368|gb|ADI32577.1| DNA repair and recombination protein RadA [Staphylothermus
hellenicus DSM 12710]
Length = 319
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 103/197 (52%), Gaps = 12/197 (6%)
Query: 15 LTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSAS 74
L+ K T G +D LGGGI +ITE E G+GKTQ C QL++S QLP GGL+
Sbjct: 80 LSVRKITTGSKNLDDLLGGGIETKTITEFYGEYGTGKTQICHQLSVSVQLPPERGGLAGK 139
Query: 75 SLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSS 134
++Y+ TE F R+ ++ D + I+ Q ++ D + I+ ++ SF+
Sbjct: 140 AVYVDTEGTFRWERIEAMARGLGLDPD-EAMENIYYQRAYNSDHQIAIVEELFSFVPEHD 198
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+L+VIDS+ + FR+++ ++L R K L +A + +AV+VTNQV
Sbjct: 199 A-----KLVVIDSVTSHFRAEYPG-RENLATRQQKLNKHLHQLVRLAEAYNIAVVVTNQV 252
Query: 195 V---DLM--EPNEGVNG 206
+ D+ +P + V G
Sbjct: 253 MARPDVFYGDPTQAVGG 269
>gi|209946402|gb|ACI97432.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 125/282 (44%), Gaps = 50/282 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + C +DRC GGG+ ITEL +G GKTQ QL+L QLP GGL Y+
Sbjct: 87 RVSXXCSALDRCTGGGVVTRGITELCGAAGVGKTQLLXQLSLCVQLPRELGGLGKGVAYI 146
Query: 79 HTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL Q+S P + N IFV++ + LL ++ +I ++
Sbjct: 147 CTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR +D +R+ +++ L + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
G+ P LG+ WA+ +RL +SR +Q++
Sbjct: 257 AT--------------------RDGQDEIPCLGLQWAHLGRTRLRVSRVPXXHRMGDQLI 296
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREG 296
T R L ++++P + EF IT EG
Sbjct: 297 ----------------TVRKLEILYSPETPNDFAEFLITAEG 322
>gi|345803591|ref|XP_547868.3| PREDICTED: DNA repair protein RAD51 homolog 2 [Canis lupus
familiaris]
Length = 350
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 120/232 (51%), Gaps = 29/232 (12%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGDVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VH-----SVDQLLDIMPKIESFIKNSSNSRLPI 140
RL +++ + P + + S VH S D +L + +E I + +
Sbjct: 150 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELSCDAVLQRIESLEEEIISKG-----V 204
Query: 141 RLIVIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV----- 194
+L++IDS+A++ R +FD + ++++R+ + + LK +A F + V++TNQ+
Sbjct: 205 KLVIIDSVASVVRKEFDTQLQGNMRERNKFLAREAASLKYLAEEFSIPVILTNQITTHLS 264
Query: 195 ------VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G S+ + ALG W++ VN+RL L
Sbjct: 265 RALASQADLVSPADDLS-LSEGT-----SASSCVMAALGNTWSHSVNTRLIL 310
>gi|212224798|ref|YP_002308034.1| DNA repair and recombination protein RadA [Thermococcus onnurineus
NA1]
gi|212009755|gb|ACJ17137.1| radA DNA repair protein rad51 [Thermococcus onnurineus NA1]
Length = 353
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 130/297 (43%), Gaps = 43/297 (14%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G M ++ T K + G +D+ +GGGI +ITE+ E GSGKTQ L +
Sbjct: 98 IGTFMRADEYMEKRRTIGKISTGSKSLDKLVGGGIETQAITEVFGEFGSGKTQLAHTLAV 157
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLL 120
QLP GGL S +++ TE F R+ Q++ R + I+V + + +
Sbjct: 158 MVQLPPEEGGLQGSVIWIDTENTFRPERIRQIAEN-RGLDPEEVLKNIYVARAFNSNHQM 216
Query: 121 DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAM 180
++ + E IK + + P++LIVIDS+ A FRS++ L +R K L +
Sbjct: 217 LLVERAEEIIKEKAETERPVKLIVIDSLMAHFRSEYVGR-GTLAERQQKLAKHLADLHRI 275
Query: 181 AVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
A + +AV VTNQV +P+ + G P P G A+ R++L
Sbjct: 276 ADLYDIAVFVTNQV--QAKPD------------AFF--GDPTRPVGGHILAHSATLRIYL 319
Query: 241 SRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ G +G +R ++ +PHL + F IT +GV
Sbjct: 320 RK----------------GKAG---------KRVARLIDSPHLPEGEAIFRITDKGV 351
>gi|378734838|gb|EHY61297.1| DNA repair protein RAD57 [Exophiala dermatitidis NIH/UT8656]
Length = 453
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 138/321 (42%), Gaps = 57/321 (17%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P IDR L GG ITE+V ES GKTQ L L LS QLP GL ++Y+ TE P
Sbjct: 111 PAIDRALVGGFAPGHITEIVGESAVGKTQLVLGLLLSVQLPPPR-GLGKGAIYVSTEAPL 169
Query: 85 PMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSV-DQLLDIMPKIESFIKNSSNSRLPIRLI 143
RL Q+ + P D + VH++ L+ I + + R I L+
Sbjct: 170 NTSRLKQMLYAHPEYESMEPQDRPSLDFVHTIATNDLEAQEHILRYQLPVAVERFNIGLV 229
Query: 144 VIDSIAALFRSDFDN-TMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME--- 199
V+DS+AA FR++ + T L +R+ K++ ML+ +A+ A++VTNQV D E
Sbjct: 230 VLDSVAANFRAEHETRTPAGLAERAVELGKLATMLRRVAIQNNTAIVVTNQVSDRFEDQR 289
Query: 200 --------------------PNEGVN---GLRVGNLGCL-YSS--------------GRP 221
PN V+ R + L Y G+
Sbjct: 290 NIGRPSSSSPATRSSPALSGPNVEVSPAVAERRQEVQSLDYQQQFFTGWGDDPHERRGQY 349
Query: 222 ICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAP 281
PALG+AWAN +++R+ L + E Q GG + R+ R+ VVFAP
Sbjct: 350 KNPALGLAWANQISARIVLK-----MEGERQEYAGG------NIWRDRKKSRTFAVVFAP 398
Query: 282 HLADT--SCEFEITREGVFGV 300
T +EI G+ +
Sbjct: 399 WAPQTYPPIRYEIGMPGIVSL 419
>gi|149737201|ref|XP_001500140.1| PREDICTED: DNA repair protein RAD51 homolog 2 [Equus caballus]
Length = 350
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 119/232 (51%), Gaps = 29/232 (12%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPIDMGGLEGAVVYIDTEAAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VH-----SVDQLLDIMPKIESFIKNSSNSRLPI 140
RL +++ + PS +N + S VH S D++L + +E I + +
Sbjct: 150 ERLVEIAESRFPSYFNNEDKLLLTSSNVHLYRELSCDEVLQRVESLEEEIISKG-----V 204
Query: 141 RLIVIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV----- 194
+L++IDS+A++ R +FD + ++++R+ + + LK +A F + V++TNQ+
Sbjct: 205 KLVIIDSVASVVRKEFDTQLQGNMRERNKFLAREAASLKYLAEEFSIPVILTNQITTHLS 264
Query: 195 ------VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ S + ALG W++ VN+RL L
Sbjct: 265 GAPASQADLVSPADDLSPSEG------PSGSSCVTAALGNTWSHSVNTRLIL 310
>gi|209946388|gb|ACI97425.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 128/282 (45%), Gaps = 50/282 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGG+ ITEL +G GKTQ LQL+L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYI 146
Query: 79 HTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL Q+S P + N IFV++ + LL ++ +I ++
Sbjct: 147 CTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR +R+ +++ L + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYXXYLERARHMRRLADALLSYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
G+ P LG+ WA+ +RL +SR V ++++M
Sbjct: 257 AT--------------------RDGQDEIPCLGLQWAHLGRTRLRVSR----VPKQHRMG 292
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREG 296
+ + T R L ++++P + E IT EG
Sbjct: 293 DQLI------------TVRKLEILYSPETPNDFAEXXITAEG 322
>gi|305663856|ref|YP_003860144.1| DNA repair and recombination protein RadA [Ignisphaera aggregans
DSM 17230]
gi|304378425|gb|ADM28264.1| DNA repair and recombination protein RadA [Ignisphaera aggregans
DSM 17230]
Length = 316
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 125/279 (44%), Gaps = 48/279 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G +D LGGGI +ITEL E GSGKTQ C QL ++ QLP GGLS ++Y+
Sbjct: 82 KITTGSKNLDTLLGGGIEVKTITELFGEFGSGKTQICHQLAVNVQLPPEKGGLSKRAIYI 141
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ ++ + D + ++V++V+S D + I +++ I +
Sbjct: 142 DTEGTFRWERIEAMARAIGMNPDEAMENILYVRAVNS-DHQMAIAEELKEIIPKEN---- 196
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
I L+V+DSI FR+++ ++L R + L ++A F +AV+VTNQV +
Sbjct: 197 -IGLVVVDSITGHFRAEYPGR-ENLAVRQQKLNRHLHQLMSIAELFDVAVVVTNQV--MA 252
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
P+ Y G P G + R+ L ++
Sbjct: 253 RPD------------VFY--GDPTVAIGGHVLYHAPGIRVQLKKS--------------- 283
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
R RR VV APHL ++ F IT G+
Sbjct: 284 ----------RGNRRIARVVDAPHLPESEAVFAITEAGI 312
>gi|6683006|dbj|BAA88984.1| RadA [Pyrobaculum islandicum]
Length = 315
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 118/227 (51%), Gaps = 23/227 (10%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D LGGGI ++TE+ E GSGKTQ C QL + QL GGL A ++Y+
Sbjct: 83 RISTGVRALDELLGGGIETRAVTEVAGEFGSGKTQLCHQLAVMVQLAEERGGLGAKAIYI 142
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ R + + IF +S D + ++ + +S I+ +
Sbjct: 143 DTENTFRPERIMQIAKA-RGLDPDQALNNIFYARAYSSDHQMILVDQAKSIIRQHN---- 197
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
+ L+++DS+ A FRS+F + +++ L ++ +L+ +A + +AV++TNQV +
Sbjct: 198 -VALLIVDSVIAHFRSEFPGRENLAERQQKLNKHVADLLR-LADAYDVAVVITNQV--MA 253
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+P+ + G P+ PA G A+ RL+L ++++
Sbjct: 254 QPD------------VFF--GNPLRPAGGNILAHGATYRLWLRKSKE 286
>gi|223477408|ref|YP_002581811.1| DNA repair and recombination protein RadA [Thermococcus sp. AM4]
gi|214032634|gb|EEB73463.1| DNA repair and recombination protein RadA [Thermococcus sp. AM4]
Length = 352
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 129/297 (43%), Gaps = 43/297 (14%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G M ++ T K + G +D+ LGGGI +ITE+ E GSGKTQ L +
Sbjct: 97 IGTFMRADEYMEKRKTIGKISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAV 156
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLL 120
Q P GGL S +++ TE F R+ Q++ D + ++ +S Q+L
Sbjct: 157 MVQKPPEEGGLGGSVIWIDTENTFRPERIRQIAEARGLDPDETLKNIYVARAFNSNHQML 216
Query: 121 DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAM 180
++ K E IK + + P++L+V+DS+ A FRS++ L +R K L +
Sbjct: 217 -LVEKAEEIIKEKATTDRPVKLLVVDSLMAHFRSEYVG-RGSLAERQQKLAKHLADLHRL 274
Query: 181 AVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
A + +AV VTNQV +P+ + G P P G A+ R++L
Sbjct: 275 ADLYDIAVFVTNQV--QAKPD------------AFF--GDPTRPVGGHILAHSATLRIYL 318
Query: 241 SRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ G +G +R ++ +PHL + F IT GV
Sbjct: 319 RK----------------GKAG---------KRVARLIDSPHLPEGEAVFRITERGV 350
>gi|346972548|gb|EGY16000.1| DNA-repair protein XRCC3 [Verticillium dahliae VdLs.17]
Length = 459
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 96/185 (51%), Gaps = 25/185 (13%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+DR LGGGIP +TE+ ESG GKTQF L L L+ QLPS H GL +LY+ TE P
Sbjct: 101 LDRALGGGIPTGYVTEIAGESGVGKTQFLLSLMLAVQLPSPH-GLGRRALYISTEAPLST 159
Query: 87 RRLHQ----------LSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNS 136
RL Q LS RP+ D I V SV ++ I+ F
Sbjct: 160 TRLRQILASNSLLSDLSEEERPT-----TDAIIVGSVADLESQEHIL----RFQVPVEVE 210
Query: 137 RLPIRLIVIDSIAALFRSDFD-----NTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVT 191
R I L+V+DS+AA +R++F+ N ++ RS ++ +L+ +A + LAV+V
Sbjct: 211 RSNIGLLVLDSVAANYRAEFERGVTKNHGSNMGARSNELIRLGALLRDLAQKYNLAVVVA 270
Query: 192 NQVVD 196
NQV D
Sbjct: 271 NQVGD 275
>gi|302413137|ref|XP_003004401.1| DNA repair protein RAD57 [Verticillium albo-atrum VaMs.102]
gi|261356977|gb|EEY19405.1| DNA repair protein RAD57 [Verticillium albo-atrum VaMs.102]
Length = 459
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 96/185 (51%), Gaps = 25/185 (13%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+DR LGGGIP +TE+ ESG GKTQF L L L+ QLPS H GL +LY+ TE P
Sbjct: 101 LDRALGGGIPTGYVTEIAGESGVGKTQFLLSLMLAVQLPSPH-GLGRRALYISTEAPLST 159
Query: 87 RRLHQ----------LSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNS 136
RL Q LS RP+ D I V SV ++ I+ F
Sbjct: 160 TRLRQILASNPLLSGLSEEERPT-----TDAIIVGSVADLESQEHIL----RFQVPVEVE 210
Query: 137 RLPIRLIVIDSIAALFRSDFD-----NTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVT 191
R I L+V+DS+AA +R++F+ N ++ RS ++ +L+ +A + LAV+V
Sbjct: 211 RSNIGLLVLDSVAANYRAEFERGVTKNHGSNMGARSNELIRLGALLRDLAQKYNLAVVVA 270
Query: 192 NQVVD 196
NQV D
Sbjct: 271 NQVGD 275
>gi|119719925|ref|YP_920420.1| DNA repair and recombination protein RadA [Thermofilum pendens Hrk
5]
gi|119525045|gb|ABL78417.1| DNA repair and recombination protein RadA [Thermofilum pendens Hrk
5]
Length = 358
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 136/296 (45%), Gaps = 48/296 (16%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T + L + E + G +D L GGI SITE + E G+GKTQ C QL++ QL
Sbjct: 111 ITAKTLFEKRKNIEYISTGVRSLDDLLEGGIEVGSITEFIGEFGAGKTQICHQLSVMVQL 170
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMP 124
P GGL+A +LY+ TE F R+ Q++ + + I+ ++ +S Q+L ++
Sbjct: 171 PKDKGGLNARALYVDTEGTFRPERIVQIARARGLDPEKTLENIIYARAYNSDHQML-LID 229
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
+ + +I+ + IRLI++DS+ FR+++ ++L R K L +A +
Sbjct: 230 EAKKYIE-----KYNIRLIIVDSLINHFRAEYPGR-ENLASRQQKLNKHISQLHRLASLY 283
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
LAV+VTNQV + P+ + GN P+ PA G A+ R++L +
Sbjct: 284 NLAVVVTNQV--MASPD-----IFFGN---------PLKPAGGNIMAHGCTYRIWLRK-- 325
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
+ +R ++ +P A+ F IT +GV V
Sbjct: 326 -----------------------AKEGKRIARIIDSPKHAEKEVAFAITEDGVTDV 358
>gi|70606517|ref|YP_255387.1| DNA repair and recombination protein RadA [Sulfolobus
acidocaldarius DSM 639]
gi|449066729|ref|YP_007433811.1| DNA repair and recombination protein RadA [Sulfolobus
acidocaldarius N8]
gi|449069003|ref|YP_007436084.1| DNA repair and recombination protein RadA [Sulfolobus
acidocaldarius Ron12/I]
gi|76363310|sp|Q4JAT5.1|RADA_SULAC RecName: Full=DNA repair and recombination protein RadA
gi|68567165|gb|AAY80094.1| DNA recombination protein RadA [Sulfolobus acidocaldarius DSM 639]
gi|449035237|gb|AGE70663.1| DNA repair and recombination protein RadA [Sulfolobus
acidocaldarius N8]
gi|449037511|gb|AGE72936.1| DNA repair and recombination protein RadA [Sulfolobus
acidocaldarius Ron12/I]
Length = 321
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 127/287 (44%), Gaps = 47/287 (16%)
Query: 15 LTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSAS 74
+ T+K T G +D LGGGI ++TE E GSGKTQ C Q+++S QLP GGL+
Sbjct: 81 MNTKKITTGSQALDGLLGGGIETRTMTEFFGEFGSGKTQLCHQISISVQLPQEKGGLNGK 140
Query: 75 SLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSS 134
++Y+ TE F R+ ++ +D + ++++++S D + I+ ++ I
Sbjct: 141 AVYIDTEGTFRWERIEAMAKGAGLESDIAMNNIYYMRAINS-DHQMAIVDDLQELITKDP 199
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I+LI++DSI + FR+++ ++L R K L +A + +AV++TNQV
Sbjct: 200 ----AIKLIIVDSITSHFRAEYPGR-ENLAVRQQKLNKHLHQLVRLAEMYDIAVIITNQV 254
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
+ P+ Y G P G + R+ L +
Sbjct: 255 --MARPD------------MFY--GDPTTAVGGHTLYHVPGIRVQLKK------------ 286
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
R +R +V APHL + F IT EGV E
Sbjct: 287 -------------SRGNKRIARIVDAPHLPEGEVVFAITEEGVRDAE 320
>gi|320101396|ref|YP_004176988.1| DNA repair and recombination protein RadA [Desulfurococcus mucosus
DSM 2162]
gi|319753748|gb|ADV65506.1| DNA repair and recombination protein RadA [Desulfurococcus mucosus
DSM 2162]
Length = 329
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 98/190 (51%), Gaps = 7/190 (3%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T + + L K T G +D LGGG+ +ITE E GSGKTQ C QL+++ QLP
Sbjct: 80 TAREVKQERLNIRKITTGSRSLDELLGGGVETKTITEFYGEYGSGKTQLCHQLSVNVQLP 139
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GGL ++Y+ TE F R+ ++ D D I+ ++ D + I+ +
Sbjct: 140 LEKGGLEGRAVYIDTEGTFRWERIEAMARALGLDPD-KVMDNIYYMRAYNSDHQISIVDE 198
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ +FI ++ ++L+V+DS+ + FR+++ D L +R L +A +
Sbjct: 199 LFTFIPKNN-----VKLVVVDSVTSHFRAEYPG-RDHLAERQQKLNSHLHQLVRLAEAYN 252
Query: 186 LAVLVTNQVV 195
+AV+VTNQV+
Sbjct: 253 VAVVVTNQVM 262
>gi|240102188|ref|YP_002958496.1| DNA repair and recombination protein RadA [Thermococcus
gammatolerans EJ3]
gi|239909741|gb|ACS32632.1| DNA repair and recombination protein RadA (radA) [Thermococcus
gammatolerans EJ3]
Length = 355
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 43/297 (14%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G M ++ T K + G +D+ LGGGI +ITE+ E GSGKTQ L +
Sbjct: 100 IGTFMRADEYMEKRRTIGKISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAV 159
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLL 120
Q P GGL S +++ TE F R+ Q++ D + ++ +S Q+L
Sbjct: 160 MVQKPPEEGGLGGSVIWIDTENTFRPERIRQIAEARGLDPDEVLKNIYVARAFNSNHQML 219
Query: 121 DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAM 180
++ K E IK +++ P++L+V+DS+ A FRS++ L +R K L +
Sbjct: 220 -LVEKAEEIIKEKASTDRPVKLLVVDSLMAHFRSEYVGR-GSLAERQQKLAKHLADLHRL 277
Query: 181 AVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
A + +AV VTNQV +P+ + G P P G A+ R++L
Sbjct: 278 ADLYDIAVFVTNQV--QAKPD------------AFF--GDPTRPVGGHILAHSATLRVYL 321
Query: 241 SRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ G +G +R ++ +PHL + F IT +GV
Sbjct: 322 RK----------------GKAG---------KRVARLIDSPHLPEGEAVFRITEKGV 353
>gi|335292717|ref|XP_003128695.2| PREDICTED: DNA repair protein RAD51 homolog 2 [Sus scrofa]
Length = 350
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 120/234 (51%), Gaps = 33/234 (14%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPIDMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIF-VQSVH-----SVDQLLDIMPKIESFIKNSSNSRLPI 140
RL +++ + P + V VH S D++L + +E I + +
Sbjct: 150 ERLVEMAESRFPRYFSTEEKLLLTVSKVHLYRELSCDEVLQRIESLEEEIISKG-----V 204
Query: 141 RLIVIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV----- 194
+L++IDS+A++ R +FD + ++++R+ + + LK +A F + V++TNQ+
Sbjct: 205 KLVIIDSVASVVRKEFDTQLQGNMRERNKFLAREAASLKYLAEEFSIPVILTNQITTHLS 264
Query: 195 ------VDLMEPNEGVNGLRVGNLG--CLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P + ++ L G G C+ + ALG W++ VN+RL L
Sbjct: 265 GALASQADLVSPADDLS-LSEGTSGSSCMTA-------ALGNTWSHSVNTRLIL 310
>gi|209946394|gb|ACI97428.1| spindle B [Drosophila melanogaster]
Length = 404
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 108/228 (47%), Gaps = 34/228 (14%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGG+ ITEL +G GKTQ LQL+L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYI 146
Query: 79 HTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL Q+S P + N IFV++ + LL ++ +I ++
Sbjct: 147 CTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR +D +R+ +++ L + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
G+ P LG+ WA+ +RL +SR
Sbjct: 257 AT--------------------RDGQDEIPCLGLQWAHLGRTRLRVSR 284
>gi|390961215|ref|YP_006425049.1| DNA recombination and repair protein, RecA-like protein
[Thermococcus sp. CL1]
gi|390519523|gb|AFL95255.1| DNA recombination and repair protein, RecA-like protein
[Thermococcus sp. CL1]
Length = 354
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 130/297 (43%), Gaps = 43/297 (14%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G M ++ T + + G +D+ LGGGI +ITE+ E GSGKTQ L +
Sbjct: 99 IGTFMRADEYMEKRKTIGRISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAV 158
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLL 120
QLP GGL S +++ TE F R+ Q++ D + ++ +S Q+L
Sbjct: 159 MVQLPPEEGGLGGSVIWIDTENTFRPERIRQIAENRGLDPDETLKNIYVARAFNSNHQML 218
Query: 121 DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAM 180
++ + E IK + + P++L+V+DS+ A FRS++ L +R K L +
Sbjct: 219 -LVERAEEIIKEKAETDRPVKLLVVDSLMAHFRSEYVGR-GTLAERQQKLAKHLADLHRI 276
Query: 181 AVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
A + +AV VTNQV +P+ + G P P G A+ R++L
Sbjct: 277 ADLYDIAVFVTNQV--QAKPD------------AFF--GDPTRPVGGHILAHSATLRIYL 320
Query: 241 SRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ G +G +R ++ +PHL + F IT GV
Sbjct: 321 RK----------------GKAG---------KRVARLIDSPHLPEGEAIFRITDRGV 352
>gi|255088451|ref|XP_002506148.1| Rad51 DNA recombinase 2 [Micromonas sp. RCC299]
gi|226521419|gb|ACO67406.1| Rad51 DNA recombinase 2 [Micromonas sp. RCC299]
Length = 440
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 115/249 (46%), Gaps = 45/249 (18%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGG+P SI+ELV +G+GKTQ CL L + P GGL + +++ TE F
Sbjct: 113 LDDALGGGVPTGSISELVGPAGAGKTQMCLTLACACAAPKRCGGLESGVVFIDTEQRFSS 172
Query: 87 RRLHQLSHTFRP---SNDHNP------------CDYIFVQSVHSVDQLLDIMPKIESFIK 131
+RL +++ P S H P I V + ++ ++L + +E +
Sbjct: 173 QRLAEIARAKFPETLSPAHAPDAASAERELESLTSRILVLTPSTLSEMLQRLNGLEEALI 232
Query: 132 NSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVT 191
+ +RL+++DS+AAL R+ F L +R L +I+ LK +A G+A VT
Sbjct: 233 DRG-----VRLLIVDSVAALARAQFGR--GQLTQRQELLGQIASALKQLAERLGMAAFVT 285
Query: 192 NQVVDLMEPNEGVNGLRVGN----------------LGCLYSSGRPICPALGIAWANCVN 235
NQV + G RV + G S + ALG WA+CVN
Sbjct: 286 NQVTTRV-------GARVRHAHDTAVRGGGGDTAGGGGDDADSPGSVTAALGTKWAHCVN 338
Query: 236 SRLFLSRNE 244
+RL L E
Sbjct: 339 TRLVLEGAE 347
>gi|341038851|gb|EGS23843.1| DNA repair protein (rad57)-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 576
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 99/184 (53%), Gaps = 20/184 (10%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P +D L GGIP +ITE+ ESG+GKTQF L L LS QLP H GL ++Y+ TE P
Sbjct: 130 PTLDAALSGGIPIRTITEITGESGTGKTQFLLTLLLSVQLPPPH-GLGRPAMYISTEAPL 188
Query: 85 PMRRLHQLSHT----FRPSNDHNPC-DYIFVQS---VHSVDQLLDIMPKIESFIKNSSNS 136
P RRL Q+ T +P P D I S + S D +L +E +N
Sbjct: 189 PTRRLSQMLSTNPVFQQPPRHQRPSLDRILSTSTPDLESQDHILTFQVPVEIERRN---- 244
Query: 137 RLPIRLIVIDSIAALFRSDFD----NTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTN 192
+ L+V+DS+AA +R++F+ ++ R+ ++ +L+ +A+ + +AV+V N
Sbjct: 245 ---VGLLVLDSVAANYRAEFERAGGKQGSNMGARTAELVRLGMLLRELALKYDMAVVVAN 301
Query: 193 QVVD 196
QV D
Sbjct: 302 QVAD 305
>gi|410916047|ref|XP_003971498.1| PREDICTED: DNA repair protein XRCC3-like [Takifugu rubripes]
Length = 271
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 102/185 (55%), Gaps = 15/185 (8%)
Query: 22 VGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTE 81
VGC +I+ L GG+P ITEL +SG+GKTQ LQL L Q P+ +GGL + ++Y+ TE
Sbjct: 84 VGCVVINELLRGGLPVGRITELSGQSGAGKTQLALQLCLCVQYPTDYGGLDSGAVYICTE 143
Query: 82 FPFPMRRLHQL-SHTFRPSNDHNP--------CDYIFVQSVHSVDQLLDIMPKIESFIKN 132
FP+RRL QL + + +D P D+++V+ H+ D LD + S
Sbjct: 144 NSFPIRRLQQLVTDQYVMRSDVPPSLISTLKFSDHVYVE--HTAD--LDSLQVCLSRRVP 199
Query: 133 SSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTN 192
+R RL+V+DS+AALFR +F + ++R+ +S L ++ F VL N
Sbjct: 200 LLLARGLARLVVLDSLAALFRCEFQAA--EWQERTRQMLNVSSTLHRLSQEFSTTVLCIN 257
Query: 193 QVVDL 197
QV D+
Sbjct: 258 QVTDV 262
>gi|41615212|ref|NP_963710.1| DNA repair and recombination protein RadA [Nanoarchaeum equitans
Kin4-M]
gi|73913726|sp|Q74MX9.1|RADA_NANEQ RecName: Full=DNA repair and recombination protein RadA
gi|40068936|gb|AAR39271.1| NEQ426 [Nanoarchaeum equitans Kin4-M]
Length = 325
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 130/296 (43%), Gaps = 53/296 (17%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T + +L+ T + T +D LGGGI ++TE E GSGKTQ QL + QLP
Sbjct: 75 TAEEVLEERQKTARITTMSKNLDSLLGGGIETAALTEFYGEYGSGKTQVGHQLAVDVQLP 134
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNP---CDYIFVQSVHSVDQLLDI 122
GGL ++Y+ TE F R+ Q++ D +P ++ V + D +
Sbjct: 135 PEQGGLEGKAVYIDTEGTFRPERIKQMAEAL----DLDPKKALKNVYHMKVFNTDHQMLA 190
Query: 123 MPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAV 182
K E I+ PI+LIV+DS+ ALFR+++ +++ L + +L+ +A
Sbjct: 191 ARKAEELIRKGE----PIKLIVVDSLTALFRAEYTGRGQLAERQHKLGRHVHDLLR-IAE 245
Query: 183 GFGLAVLVTNQVVDLMEPNEGVNGL-RVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
+ +A+ VTNQV + +P+ + GL V +G G A+ R+FL
Sbjct: 246 LYNVAIYVTNQV--MAKPDSFIPGLDSVQAVG-------------GHVLAHASTYRVFLR 290
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ + + R +V +PHL + F IT EG+
Sbjct: 291 KGKKGI-------------------------RIARLVDSPHLPERETTFVITEEGI 321
>gi|116245799|ref|XP_001230756.1| AGAP003791-PA [Anopheles gambiae str. PEST]
gi|116130977|gb|EAU77376.1| AGAP003791-PA [Anopheles gambiae str. PEST]
Length = 290
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 117/248 (47%), Gaps = 35/248 (14%)
Query: 24 CPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFP 83
C +D LG GIP ITEL GSGKTQ CLQL ++ Q+P GGL ++YL T +
Sbjct: 23 CRDLDLALGSGIPEGMITELCGPPGSGKTQLCLQLAVNVQIPQQLGGLQGRAVYLDTNYG 82
Query: 84 FPMRRLHQLS-------------HTFRPS------NDHNPCDYIFVQSVHSVDQLLDIMP 124
F +R+ +++ H P ++ D I V + Q+L+ +
Sbjct: 83 FFPQRVQEMAKACHNHCANIALLHKLNPEETLAGFSEATALDNILYSHVTNCTQILEAIA 142
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
+++ + + I+LIV+DS++ L R+ +M +K+ +I +L +A F
Sbjct: 143 VLQNRLYDGEK----IKLIVLDSLSFLIRNTNTRSMKRVKR----VHEILTLLHKLAHRF 194
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
G V+VTN V + +G G R I PALG + + VN R+FL R+E
Sbjct: 195 GCVVIVTNDVTTRISDVDGGGGER--------PDVPQIVPALGGSLTHKVNQRIFLGRDE 246
Query: 245 DFVVRENQ 252
++Q
Sbjct: 247 SHFDAQSQ 254
>gi|429216262|ref|YP_007174252.1| DNA repair and recombination protein RadA [Caldisphaera lagunensis
DSM 15908]
gi|429132791|gb|AFZ69803.1| DNA repair and recombination protein RadA [Caldisphaera lagunensis
DSM 15908]
Length = 327
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 128/302 (42%), Gaps = 60/302 (19%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T L L K T G +D LGGGI +TE E G+GKTQ C L ++ QLP
Sbjct: 79 TALELKKERLNIHKITTGSKSLDDLLGGGIETRDMTEFFGEYGTGKTQICHALAVNVQLP 138
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHS------VDQL 119
GGL+A ++Y+ TE F R+ Q++ D + ++++V+S VDQL
Sbjct: 139 EDKGGLNAKAVYIDTEGTFRWERIEQIARGLNLDPDKVMENIYWIRAVNSHHQMAIVDQL 198
Query: 120 LDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKA 179
D++ S+ ++L+++DS+ + FR++F ++L R L K L
Sbjct: 199 YDML------------SKDNVKLVIVDSLTSHFRAEFPG-RENLAMRQQLLNKHLHQLIR 245
Query: 180 MAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLF 239
++ + +AV+VTNQV + P+ Y G P G A+ R+
Sbjct: 246 LSEIYDIAVVVTNQV--MARPD------------VFY--GDPTSAVGGNIVAHAPGVRVQ 289
Query: 240 LSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFG 299
L R R +R +V APHL + F IT G+
Sbjct: 290 LKR-------------------------SRGNKRIARIVDAPHLPEGETVFVITEYGIKD 324
Query: 300 VE 301
E
Sbjct: 325 AE 326
>gi|444313351|ref|XP_004177333.1| hypothetical protein TBLA_0A00120 [Tetrapisispora blattae CBS 6284]
gi|387510372|emb|CCH57814.1| hypothetical protein TBLA_0A00120 [Tetrapisispora blattae CBS 6284]
Length = 467
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 146/341 (42%), Gaps = 67/341 (19%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G P ID+ L GGI + ITE+ ES SGKTQF LQL+L+ QL GGL S +++ T
Sbjct: 131 TTGDPKIDQLLNGGIYTHEITEVFGESSSGKTQFLLQLSLNVQLGIEKGGLDGSCVFITT 190
Query: 81 EFPFPMRRLHQL--SHTFRPSNDHNPCDYIFV--QSVHSV--------DQLLDIMPKIES 128
E P RRL L + S D+++ + +++V D +L++ I
Sbjct: 191 EGDLPTRRLEDLIVENKKYKSYQFEKNDFLYYSQEKIYTVSCNDLISQDHILNVQLPI-- 248
Query: 129 FIKNSSNSRLPIRLIVIDSIAALFR--------------------SDFDNTMDDLKKRSF 168
++ + N I+L++IDSI+ R S+FD+ ++
Sbjct: 249 LLERNPN----IKLVIIDSISHHMRVELQIPRKRYNNLNTKTHPKSNFDDMYRQIQDNKK 304
Query: 169 LFFKISGMLKAMAVGFGLAVLVTNQVVD--LMEPNE-----------------GVNGLRV 209
+ L ++ +G++++++NQV D L N G N +
Sbjct: 305 YIDNSAENLLKLSHKYGISIVLSNQVSDKPLKFYNNNYCPKIWDYEYQLGWLVGWNKRSI 364
Query: 210 GNLGCLYSSGRPI-------CPALGIAWANCVNSRLFLSRNED---FVVRENQMVNGGVG 259
C + P LG+ W+N V++R+ LS++ V NQ N
Sbjct: 365 KARQCRNNRNNSYTLKVETQVPNLGLTWSNHVSTRILLSKSYKAIPLVKDSNQYRNTDAS 424
Query: 260 GSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
+ + + RR+ V+++ H + F ITR GV V
Sbjct: 425 ENSEGNKTFWQIRRNFKVIYSRHCKNDDINFVITRRGVNSV 465
>gi|430812090|emb|CCJ30489.1| unnamed protein product [Pneumocystis jirovecii]
Length = 664
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 135/304 (44%), Gaps = 48/304 (15%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +ID L GGIP + E+ ESG+GK+QFC+QL L+ QLP GGL ++Y+ T
Sbjct: 79 TTGDRVIDGVLSGGIPLGHVIEIAGESGTGKSQFCMQLCLTVQLPRVLGGLERGAIYIST 138
Query: 81 EFPFPMRRLHQLSH--TFRPSNDHNPCDYIF------VQSVHSVDQLLDIMPKIESFIKN 132
E +RL +++ T R ++ D V VD L+ I F
Sbjct: 139 ETGLSTKRLFEMAQGLTNRLKQEYPDVDLCLDGVGDRVYCATCVD--LEEQDHIIHFQLP 196
Query: 133 SSNSRLPIRLIVIDSIAALFRSDFD------------NT----MDDLKKRSFLFFKISGM 176
+ R L+V+D+I +R+++D NT + DL RS ++
Sbjct: 197 VALERYNAGLVVLDNITTHYRAEYDISKVYSQTKTTNNTAKSGLVDLVNRSRDLVRLGAH 256
Query: 177 LKAMAVGFGLAVLVTNQVVD-LMEPNEGVNGLRV-GNLGCLYSSGRPIC--PALGIAWAN 232
L+++A A++V NQV D + E + L G +S G C P+LG W+N
Sbjct: 257 LRSLASKHHCAIIVINQVSDKITYSTETLLDLNYQGAWFQGWSHGEYPCKVPSLGFVWSN 316
Query: 233 CVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEI 292
++SR+ L R+ + + R+L +VF+P A + EI
Sbjct: 317 NIHSRILLLRSTLYEISH------------------MSPSRALRIVFSPFCAPAQIDIEI 358
Query: 293 TREG 296
EG
Sbjct: 359 RYEG 362
>gi|307191609|gb|EFN75106.1| DNA-repair protein XRCC3 [Harpegnathos saltator]
Length = 244
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 123/278 (44%), Gaps = 50/278 (17%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T GC +D L GI C IT+ +G+GKTQ LQL L+ QLP++ GGL A ++Y+ T
Sbjct: 12 TTGCSKLDTILKDGISCRGITQFYGAAGTGKTQLALQLCLTVQLPTTAGGLQAGAIYICT 71
Query: 81 EFPFPMRRLHQLSHTFRPSNDHN-PCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
E FP +RL QL + H+ D IFV ++D+L + + N+
Sbjct: 72 EALFPSKRLQQLIENSEIAKIHSVNGDVIFVDHASTMDELEYCLHHKVPALMNAHK---- 127
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
I L++IDSIAA +R ++ D + +S KI L + L V+ NQV +++
Sbjct: 128 IGLLIIDSIAAPYR--VEDWEDPSRGKSLR--KIGRQLHELCKNGDLCVICINQVSAIID 183
Query: 200 PNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVG 259
N + S PALG+ W++ + S + R
Sbjct: 184 NN-------------IISDNEQ--PALGLTWSSMITSSIHFYRK---------------- 212
Query: 260 GSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
S + C ++ A HL + FE+ R GV
Sbjct: 213 --ASVRYAC--------IMLASHLPRITFNFEVNRSGV 240
>gi|301763292|ref|XP_002917067.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Ailuropoda
melanoleuca]
Length = 344
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 118/233 (50%), Gaps = 31/233 (13%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VH-----SVDQLLDIMPKIESFIKNSSNSRLPI 140
RL +++ + P + + S VH S D++L + +E I + +
Sbjct: 150 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELSCDEVLRRIDSLEEEIISKG-----V 204
Query: 141 RLIVIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV----- 194
+L++IDS+A++ R +FD + ++++R+ + + LK +A F + V++TNQ+
Sbjct: 205 KLVIIDSVASVVRKEFDTQLQGNMRERNKFLAREAASLKYLAEEFSIPVILTNQITTHLS 264
Query: 195 ------VDLMEP-NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
DL+ P ++ C + ALG W++ VN+RL L
Sbjct: 265 RALASQADLVSPADDLSLSEGSSGSSC-------VTAALGNTWSHSVNTRLIL 310
>gi|242085564|ref|XP_002443207.1| hypothetical protein SORBIDRAFT_08g015360 [Sorghum bicolor]
gi|241943900|gb|EES17045.1| hypothetical protein SORBIDRAFT_08g015360 [Sorghum bicolor]
Length = 342
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 124/283 (43%), Gaps = 45/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E SGKTQ C L ++ QLP GG +LY+
Sbjct: 104 QLTTGSRELDQILDGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYI 163
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F RL Q++ F N + + + ++ D ++ + S + + +
Sbjct: 164 DAEGTFRPERLLQIADRF-GLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFA-- 220
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+V+DS AL+R+DF +L R K L+ +A FG+AV++TNQVV +
Sbjct: 221 ---LMVVDSATALYRTDFSG-RGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQV 276
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G +G I P G A+ +RLFL +
Sbjct: 277 D-------------GAAVFAGPQIKPIGGNIMAHASTTRLFLRKG--------------- 308
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
RR R VV +P LA+ F+I+ EGV V+
Sbjct: 309 ----------RREERICKVVSSPCLAEAEARFQISSEGVTDVK 341
>gi|347523524|ref|YP_004781094.1| DNA repair and recombination protein RadA [Pyrolobus fumarii 1A]
gi|343460406|gb|AEM38842.1| DNA repair and recombination protein RadA [Pyrolobus fumarii 1A]
Length = 322
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 110/212 (51%), Gaps = 24/212 (11%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T L L +K T G +D LGGGI ITE E GSGKTQ C QL ++ QLP
Sbjct: 75 TALELKKERLAAKKITTGSRNLDALLGGGIETRMITEFFGEYGSGKTQICHQLAVNVQLP 134
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHS------VDQL 119
GGL A ++Y+ TE F R+ ++ + D + +V++++S V++L
Sbjct: 135 PEQGGLGARAVYIDTEGTFRWERIENMAKRWGLDPDKVMENIYYVRAINSDHQMAIVEEL 194
Query: 120 LDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKA 179
D++PK +N I+L+++DSI + FR+++ + L +R + L
Sbjct: 195 FDLVPK-----QN-------IKLVIVDSITSHFRAEYPGR-ERLAERQQKLNRHLHQLMR 241
Query: 180 MAVGFGLAVLVTNQVV---DLM--EPNEGVNG 206
+A + +A+++TNQV+ D++ +P + V G
Sbjct: 242 LAELYDIAIVITNQVMARPDVVWGDPTQAVGG 273
>gi|298714477|emb|CBJ27499.1| Rad51 DNA recombinase 2 [Ectocarpus siliculosus]
Length = 335
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 97/196 (49%), Gaps = 13/196 (6%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGL--SASSLY 77
G +D L GG P ITELV +G GKTQ CLQ+ A LP+ GGL A +Y
Sbjct: 85 VATGIQPLDDALQGGFPTGMITELVGPAGIGKTQTCLQVAAQACLPAKLGGLGEDAGVVY 144
Query: 78 LHTEFPFPMRRLHQLSHTFRP------SNDHNPCDYIFVQ-SVHSVDQLLDIMPKIESFI 130
L TE F RL +++ P S + + + Q +V VD ++ ++E+
Sbjct: 145 LDTERKFSPDRLVEIASERHPGHYGEFSTEKGSMERLLNQVTVFPVDNSAALVDRLETLQ 204
Query: 131 KNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLV 190
S +RLIV+DSIAAL R DF +D R L + + +LK++A F VLV
Sbjct: 205 ARMIESN--VRLIVLDSIAALARRDF--AREDTLSRQELLTRQAAVLKSLAYTFSAVVLV 260
Query: 191 TNQVVDLMEPNEGVNG 206
TNQV P G+ G
Sbjct: 261 TNQVTTSFYPTSGLQG 276
>gi|124027840|ref|YP_001013160.1| DNA repair and recombination protein RadA [Hyperthermus butylicus
DSM 5456]
gi|123978534|gb|ABM80815.1| DNA repair and recombination protein [Hyperthermus butylicus DSM
5456]
Length = 323
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 109/208 (52%), Gaps = 29/208 (13%)
Query: 15 LTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLS-- 72
+ T K T G +D LGGGI +ITE E GSGKTQ C QL ++ QLP GGLS
Sbjct: 79 MQTRKITTGSRNLDDLLGGGIETKTITEFFGEFGSGKTQICHQLAVNVQLPIEKGGLSTQ 138
Query: 73 ---ASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHS------VDQLLDIM 123
A ++Y+ TE F RL ++ + D + ++++++S VD+L +I+
Sbjct: 139 DRVAKAVYIDTEGTFRWERLENMAKRWGLDPDEVMSNIFYIRAINSDHQMAIVDELFNIV 198
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
PK +N I+L+++DS+ + FR+++ ++L R + L +A
Sbjct: 199 PK-----EN-------IKLVIVDSVTSHFRAEYPG-RENLAARQQKLNRHLHQLAKLAEV 245
Query: 184 FGLAVLVTNQVV---DLM--EPNEGVNG 206
+ LAV++TNQV+ D+ +P + V G
Sbjct: 246 YDLAVVITNQVMARPDVFYGDPTQAVGG 273
>gi|303274861|ref|XP_003056745.1| Rad51 DNA recombinase 2 [Micromonas pusilla CCMP1545]
gi|226461097|gb|EEH58390.1| Rad51 DNA recombinase 2 [Micromonas pusilla CCMP1545]
Length = 437
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 113/250 (45%), Gaps = 38/250 (15%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+P SI+ELV +G+GKTQFCL L ++A P S GGL +++ TE F
Sbjct: 119 LDLALKGGVPTGSISELVGPAGAGKTQFCLTLAVAAAAPKSVGGLDGGVVFIDTEQKFSG 178
Query: 87 RRLHQLSHTFRPS------NDHNPCDYIFVQSVHSV-DQLLDIMPKIESFIKNSSNSRLP 139
RL +++ PS D P + S+ ++ ++L + P S I N
Sbjct: 179 VRLAEIARAKFPSVYGDGDGDGAPSEADARASLTTLTSRVLVLTPSTLSEILQRLNGLEE 238
Query: 140 ------IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQ 193
+RL+V+DS+AAL R++F L++R L +I+ +LK A LAV VTNQ
Sbjct: 239 ALIDHGVRLLVVDSMAALARAEFGR--GQLQQRQELLGQIASVLKQQAERLHLAVFVTNQ 296
Query: 194 VVDLMEPNEG-----------------------VNGLRVGNLGCLYSSGRPICPALGIAW 230
V + G S + ALG W
Sbjct: 297 VTTRIGAAAGHDTGPGAGREEGDGGGIGGGGGGAERDAGSRDAGSGSGSGSVTAALGTKW 356
Query: 231 ANCVNSRLFL 240
A+CVN+RL L
Sbjct: 357 AHCVNTRLVL 366
>gi|406865989|gb|EKD19029.1| DNA repair protein RAD57 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 492
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 104/189 (55%), Gaps = 30/189 (15%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D+ LGGGIP ITE+ ESG+GKTQF L L L+ QLP+ H GLS+S LY+ TE P
Sbjct: 134 LDQALGGGIPTGHITEVAGESGAGKTQFLLTLLLAVQLPAPH-GLSSSVLYISTESALPT 192
Query: 87 RRLHQL--SHTFRPSNDHNPCDYIFVQSVHSVDQLLDIM-PKIES------FIKNSSNSR 137
RL QL SH + D P ++DQ++ I+ P +ES F + R
Sbjct: 193 TRLSQLLKSHPVLLAADPKP----------TLDQVISIVTPDLESQDHILRFQVPVAVRR 242
Query: 138 LPIRLIVIDSIAALFRSDFDNT----------MDDLKKRSFLFFKISGMLKAMAVGFGLA 187
IRLI++DS+AA +R++F+ ++ +RS K+ +L+ +A +A
Sbjct: 243 HGIRLIILDSVAANYRAEFERPEVGAATGQRREANMAQRSSELVKLGQLLRDLAREQNIA 302
Query: 188 VLVTNQVVD 196
++V NQV D
Sbjct: 303 IVVANQVAD 311
>gi|315231638|ref|YP_004072074.1| DNA repair and recombination RadA-like protein [Thermococcus
barophilus MP]
gi|315184666|gb|ADT84851.1| DNA repair and recombination RadA-like protein [Thermococcus
barophilus MP]
Length = 355
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 126/282 (44%), Gaps = 43/282 (15%)
Query: 16 TTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASS 75
T + + G +D+ LGGGI +ITE+ E GSGKTQ L + QLP GGL+ S
Sbjct: 115 TIGRISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQIAHTLAVMVQLPPEEGGLNGSV 174
Query: 76 LYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSN 135
+++ TE F R+ Q++ R + I+V ++ + + ++ K E IK N
Sbjct: 175 IWIDTENTFRPERIRQIAEN-RGLDPDEVLKNIYVARAYNTNHQMLLVEKAEEIIKEKLN 233
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+ P++L+V+DS+ + FRS++ L +R K L +A + +A+ VTNQV
Sbjct: 234 TDRPVKLMVVDSLTSHFRSEYVG-RGALAERQQKLGKHLADLHRLANLYDIAIFVTNQV- 291
Query: 196 DLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVN 255
P+ + G P P G A+ R++L +
Sbjct: 292 -QARPD------------AFF--GDPTRPIGGHILAHSATLRIYLRK------------- 323
Query: 256 GGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
G +G +R ++ +PHL + F IT +G+
Sbjct: 324 ---GKAG---------KRIARLIDSPHLPEGEAAFRITDKGI 353
>gi|403343876|gb|EJY71271.1| DNA repair protein XRCC3 [Oxytricha trifallax]
Length = 319
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 136/291 (46%), Gaps = 45/291 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC II+ L GG + E+ ESGSGKTQ +QL L++ LP +GGL SL++
Sbjct: 62 RLSSGCKIINDFLRGGFLSKRLYEIYGESGSGKTQLAIQLMLNSILPLKNGGLGGKSLFV 121
Query: 79 HTEFPFPMRRLHQLSHTFRP-----SNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNS 133
T +R +++ F ++++ D I + ++++ + + S I+
Sbjct: 122 ITGKHLNEKRFNEMKEYFLIEHQGLTHENAVKDNIIMNYCKTIEEYNKVFLNLVSRIQQE 181
Query: 134 SNSRLPIRLIVIDSIAALFRSDFDNTMD-----DLKKRSFLFFKISGMLKAMAVGFGLAV 188
+ ++L++ID+I + DN + D +RS K S +LK +A + L +
Sbjct: 182 N-----VKLVIIDNIHNV----CDNFIKSEGSIDFLERSRFIQKHSKLLKKLAYQYDLTI 232
Query: 189 LVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVV 248
++ N VV + + G G S G+ I P+LG+ W NC+N R+ L +
Sbjct: 233 ILMNNVVADVSQDNSSKGFFDGK-----SRGQSITPSLGLQWTNCINERIHLKKK----- 282
Query: 249 RENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFG 299
G+ +++ RR++ + + ++ + +FEI G+ G
Sbjct: 283 -----------GTNADNI-----RRTIVIDKSSYMRKSELDFEIINNGIRG 317
>gi|222154119|gb|ACM47239.1| RAD51 recombination protein [Triticum aestivum]
Length = 343
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 131/283 (46%), Gaps = 45/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +DR L GGI SITEL E SGKTQ C L ++ QLP GG +LY+
Sbjct: 105 QVTTGSRELDRILEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYI 164
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F N + + + ++ D ++ + S + + +
Sbjct: 165 DAEGTFRPQRLLQIADRF-GLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFA-- 221
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+VIDS AL+R+DF +L R K L+ +A FG+AV+++NQVV
Sbjct: 222 ---LMVIDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVISNQVV--- 274
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
V+G G ++ +G I P G A+ +RL+L +
Sbjct: 275 ---AQVDG------GAMF-AGPQIKPIGGNIMAHASTTRLYLRKGR-------------- 310
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+E+ +C+ VV +P LA+ F+I+ EGV V+
Sbjct: 311 ----AEERICK-------VVSSPCLAEAEARFQISPEGVTDVK 342
>gi|209946364|gb|ACI97413.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 127/283 (44%), Gaps = 50/283 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGG+ ITEL +G GKTQ LQL+L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYI 146
Query: 79 HTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL Q+S P + N IFV++ + LL ++ +I ++
Sbjct: 147 CTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+ +FR +R+ +++ L + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVXXIFR-----LYXXYLERARHMRRLADALLSYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
G+ P LG+ WA+ +RL +SR V ++++M
Sbjct: 257 AT--------------------RDGQDEIPCLGLQWAHLGRTRLRVSR----VPKQHRMG 292
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ + T R L ++++P + E IT +GV
Sbjct: 293 DQLI------------TVRKLEILYSPETPNDFAEXXITADGV 323
>gi|443925377|gb|ELU44230.1| Rad51 domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 379
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 131/300 (43%), Gaps = 26/300 (8%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G ID LGGG + E+ E+G K+Q LQL+L+ QLP S GL+ SSLYL T
Sbjct: 87 TTGDDAIDSLLGGGFTIGQVHEITGEAG--KSQLALQLSLTVQLPESEHGLNGSSLYLTT 144
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPC---DYIFVQSVHSVDQLLDIMPKIESF-IKNSSNS 136
RL ++ + + H D I Q VD+L ++ + +K +
Sbjct: 145 LNRLSTSRLLEMISSHPVLSAHQSTVSLDNIATQHAPDVDKLTVLLTTLLPVHVKTCRDR 204
Query: 137 RLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
P+RL+VIDS+ ALFR N L RS + +L +A LAV+V N V D
Sbjct: 205 GCPLRLLVIDSMTALFRDKQANQPQTLYARSESLNAVGALLHQIASTHELAVVVLNDVTD 264
Query: 197 LMEP-----NE------GVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+ P NE G + R ALG+ W+N +NSR+ L+R
Sbjct: 265 VFAPHPTGGNEDPELIYKEQSRWFARAGGVAGEERHEA-ALGMVWSNHLNSRMMLARTGR 323
Query: 246 FVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADT----SCEFEITREGVFGVE 301
E V G SE + RR ++F + D S +F I +G+ V+
Sbjct: 324 RRHIEGSRVRKQGEGEDSEAVLIRRA----FILFGRSVEDEVPAPSLDFIIGTQGIMSVQ 379
>gi|18978298|ref|NP_579655.1| DNA repair and recombination protein RadA [Pyrococcus furiosus DSM
3638]
gi|397652424|ref|YP_006493005.1| DNA repair and recombination protein RadA [Pyrococcus furiosus
COM1]
gi|13878669|sp|O74036.1|RADA_PYRFU RecName: Full=DNA repair and recombination protein RadA
gi|3560537|gb|AAC34998.1| recombinase [Pyrococcus furiosus DSM 3638]
gi|18894122|gb|AAL82050.1| recombinase, radA [Pyrococcus furiosus DSM 3638]
gi|393190015|gb|AFN04713.1| DNA repair and recombination protein RadA [Pyrococcus furiosus
COM1]
Length = 349
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 43/297 (14%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G M L T + + G +D+ LGGGI +ITE+ E GSGKTQ L +
Sbjct: 94 LGTFMRADEYLKKRATIGRISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAV 153
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLL 120
QLP GGL+ S +++ TE F R+ +++ R + +I+V + + +
Sbjct: 154 MVQLPPEEGGLNGSVIWIDTENTFRPERIREIAQN-RGLDPDEVLKHIYVARAFNSNHQM 212
Query: 121 DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAM 180
++ + E IK N+ P++L+++DS+ + FRS++ L +R K L +
Sbjct: 213 LLVQQAEDKIKELLNTDRPVKLLIVDSLTSHFRSEYIG-RGALAERQQKLAKHLADLHRL 271
Query: 181 AVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
A + +AV VTNQV P+ + G P P G A+ R++L
Sbjct: 272 ANLYDIAVFVTNQV--QARPD------------AFF--GDPTRPIGGHILAHSATLRVYL 315
Query: 241 SRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ G GG +R ++ APHL + F IT +G+
Sbjct: 316 RK--------------GKGG-----------KRIARLIDAPHLPEGEAVFSITEKGI 347
>gi|218884526|ref|YP_002428908.1| DNA repair and recombination protein RadA [Desulfurococcus
kamchatkensis 1221n]
gi|254764424|sp|B8D610.1|RADA_DESK1 RecName: Full=DNA repair and recombination protein RadA
gi|218766142|gb|ACL11541.1| DNA repair and recombination protein radA [Desulfurococcus
kamchatkensis 1221n]
Length = 328
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 128/292 (43%), Gaps = 48/292 (16%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T + + L K T G +D LGGG+ +ITE E GSGKTQ C QL+++ QL
Sbjct: 79 TAREVKQERLNIGKITTGSKSLDELLGGGVETKTITEFFGEYGSGKTQICHQLSVNVQLT 138
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GGL+ ++Y+ TE F R+ ++ D D I+ ++ D + I+ +
Sbjct: 139 PEKGGLNGRAVYIDTEGTFRWERIEAMARALGLDPD-KVMDNIYYMRAYNSDHQIAIVDE 197
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ +F+ + +RL+++DS+ + FR+++ +++ L + +++ +A +
Sbjct: 198 LFTFVPKND-----VRLVILDSVTSHFRAEYPGREHLAERQQKLNSHLHQLMR-LAEAYN 251
Query: 186 LAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+AV+VTNQV + P+ Y G P G A+ R+ L +
Sbjct: 252 VAVVVTNQV--MARPD------------VFY--GDPTTAVGGHVLAHTPGVRIQLRK--- 292
Query: 246 FVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ +R VV APHL + F IT EG+
Sbjct: 293 ----------------------SKGNKRIARVVDAPHLPEGEVVFVITEEGI 322
>gi|357150566|ref|XP_003575503.1| PREDICTED: DNA repair protein RAD51 homolog B-like [Brachypodium
distachyon]
Length = 346
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 131/283 (46%), Gaps = 45/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +DR L GGI SITEL E SGKTQ C L ++ QLP GG +LY+
Sbjct: 108 QVTTGSRELDRILEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYI 167
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F N + + + ++ D ++ + S + + +
Sbjct: 168 DAEGTFRPQRLLQIADRF-GLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFA-- 224
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+V+DS AL+R+DF +L R K L+ +A FG+AV+++NQVV
Sbjct: 225 ---LMVVDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVISNQVV--- 277
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
V+G G ++ +G I P G A+ +RL+L +
Sbjct: 278 ---AQVDG------GAMF-AGPQIKPIGGNIMAHASTTRLYLRKGR-------------- 313
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+E+ +C+ VV +P LA+ F+I+ EGV V+
Sbjct: 314 ----AEERICK-------VVSSPCLAEAEARFQISPEGVTDVK 345
>gi|442535550|gb|AGC52848.1| XRCC3, partial [Macrobiotus cf. harmsworthi EABP-2013]
Length = 230
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 105/206 (50%), Gaps = 27/206 (13%)
Query: 9 NLLDNPLTTEKC-------TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
L D L+TEK ++GCP +DR GG+ + E +GSGKTQ CLQL +
Sbjct: 31 KLTDYRLSTEKSDMDNKLLSLGCPHLDRFFRGGLRLEHLVEFTGLAGSGKTQICLQLATT 90
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRL-----HQLSHTFRPSNDHNP-CDYIFVQSVHS 115
AQLP GGL+ LY+ TE FP RL ++ S + S P D IFV+
Sbjct: 91 AQLPEEKGGLNGDVLYIFTENNFPAGRLVEIVEYRKSLSMAQSFPSVPSTDRIFVEH--- 147
Query: 116 VDQLLDIMPKIESFIKNSSN---SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFK 172
LD K+E F++ S+ PI+L++IDSI +FR +D L++RS
Sbjct: 148 ----LDTYEKLEEFLEGKVYGMLSQKPIKLLIIDSITNVFRY-YDGK---LEERSKKIQC 199
Query: 173 ISGMLKAMAVGFGLAVLVTNQVVDLM 198
I +L+ + + L V+ NQV D++
Sbjct: 200 IGRILEELKSKYSLMVICANQVSDVI 225
>gi|255513422|gb|EET89688.1| DNA repair and recombination protein RadA [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 316
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 127/292 (43%), Gaps = 48/292 (16%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T N+ + K + +D +GGGI N+ITE+ + SGKTQ QL ++AQLP
Sbjct: 71 TGTNIAEKRQALGKISTNSKDLDELIGGGIEINAITEVYGKFASGKTQLAFQLAVNAQLP 130
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GG+ L++ TE F R+ +++ + + V++ S Q+L I +
Sbjct: 131 KDKGGVDGKVLFIDTEGTFRPERIEEIAKAKGIDPKTALENIMVVRATSSEKQMLTI-ER 189
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+S I+ I+LI+IDS+ ALFR++F L +R L+ +A +
Sbjct: 190 ADSLIREKG-----IKLIIIDSLTALFRAEFLG-RGALGERQQKLNSHMHKLQQLADKYD 243
Query: 186 LAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+AV VTNQV+D N G L+ G P P G A+ RL++ +
Sbjct: 244 VAVYVTNQVMD--------------NPGILF--GDPTTPIGGNIIAHAATLRLYIRK--- 284
Query: 246 FVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ +R + +V +P++ D C +T G+
Sbjct: 285 ----------------------SKEDKRIIRLVDSPNMPDGECIIRVTSAGI 314
>gi|397779635|ref|YP_006544108.1| DNA repair and recombination protein radA [Methanoculleus
bourgensis MS2]
gi|396938137|emb|CCJ35392.1| DNA repair and recombination protein radA [Methanoculleus
bourgensis MS2]
Length = 324
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 113/252 (44%), Gaps = 29/252 (11%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G T +++LD +K P D +GGG+ +ITE+ E GSGK+Q Q+ +
Sbjct: 63 IGGFKTGRDILDKRKDVKKLKTLVPEFDELVGGGLETQAITEVYGEFGSGKSQLVHQMAV 122
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSND----HNPCDYIFVQSVHSV 116
+ QLP GGL S +Y+ TE F R+ Q+ + D + I V HS
Sbjct: 123 NVQLPEESGGLHGSVIYVDTENTFRPERIEQMVNGLPEDVDLGELEEILERIHVARAHSS 182
Query: 117 DQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGM 176
D + ++ + NS P+RL VIDS+ +LFRS++ ++ L + +
Sbjct: 183 DHQMLLLDTARELANDLRNSEYPVRLFVIDSLTSLFRSEYAGRGTLAARQQKLNRHMHDL 242
Query: 177 LKAM----AVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWAN 232
LK + AVG LVTNQV+ N L+ G P P G +
Sbjct: 243 LKLIDDHNAVG-----LVTNQVMS--------------NPAVLF--GDPTKPIGGNIVGH 281
Query: 233 CVNSRLFLSRNE 244
RL+L +++
Sbjct: 282 TATFRLYLRKSK 293
>gi|440632890|gb|ELR02809.1| hypothetical protein GMDG_05746 [Geomyces destructans 20631-21]
Length = 347
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 116/250 (46%), Gaps = 36/250 (14%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P +D L GG P ITE+ ESGSGKTQ L L L+ QLPS H GL+ S++Y+ TE
Sbjct: 100 PSLDGLLSGGFPAGYITEITGESGSGKTQLLLLLLLAVQLPSPH-GLNRSAIYITTESSL 158
Query: 85 PMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIV 144
P RL QL P I ++H+ D L+ I F + R + L+V
Sbjct: 159 PTTRLAQL-RAAHPILAETSLSRIL--TIHARD--LETQDHILRFQLPLAIRRHNVGLVV 213
Query: 145 IDSIAALFRSDFDNTMD-------DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDL 197
IDS+AA FR++F+ + D ++ R+ + +L+ A G+AV+V+NQV D
Sbjct: 214 IDSVAANFRAEFERSGDGGAAHGANMALRTAELVGLGALLRGAARSEGVAVVVSNQVADR 273
Query: 198 MEP---NEGVNGLRV------------GNL--------GCLYSSGRPICPALGIAWANCV 234
P EG G G + G + G P+LG+ W N +
Sbjct: 274 FAPLSVGEGPRGSWAESQGRRERLTLDGQMRFFTGWGDGEYWEEGGMKTPSLGLVWTNQL 333
Query: 235 NSRLFLSRNE 244
R+ + R E
Sbjct: 334 ACRVAVGRGE 343
>gi|194740846|ref|XP_001952901.1| GF17509 [Drosophila ananassae]
gi|190625960|gb|EDV41484.1| GF17509 [Drosophila ananassae]
Length = 345
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 134/306 (43%), Gaps = 56/306 (18%)
Query: 4 PMTPQNLLDNPLTT---EKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
P T +L PL + T GC +DRC GGG+ ITE+ GKT L L+L
Sbjct: 70 PQTADSLF-KPLANVRWSRVTFGCSALDRCTGGGVVTRGITEIFGGYSVGKTHLLLHLSL 128
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVD 117
QLP GGL Y+ T PFP RRL +S T+ P+ N + V+
Sbjct: 129 GVQLPRELGGLGKGVAYICTGSPFPARRLLHISKTWEQRYPNTKLNFLANVMVEVQKDAK 188
Query: 118 QLLD-IMPKIESFIKNSSNSRLPIRLIVIDSIAALFR--SDFDNTMDDLKKRSFLFFKIS 174
L+D + ++ + I LIVIDS+AA+FR DF+ DL+ ++
Sbjct: 189 SLMDCVNNRLSDLFQQHG-----IGLIVIDSVAAVFRDCKDFNQRARDLR-------SLT 236
Query: 175 GMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCV 234
L + + + AV+ N+ V ++ + G P LG+ WA+
Sbjct: 237 NTLLSYSEKYNCAVVCVNEAVSSIDGD-----------------GDDQAP-LGLQWAHLG 278
Query: 235 NSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITR 294
+RL +++ +++++ G E F RR L V+++P + +F IT
Sbjct: 279 RTRLRVTKEP----KQHKL--------GDELFTVRR----LEVMYSPETPNDFGQFLITS 322
Query: 295 EGVFGV 300
EGV V
Sbjct: 323 EGVVDV 328
>gi|358060240|dbj|GAA93994.1| hypothetical protein E5Q_00641 [Mixia osmundae IAM 14324]
Length = 462
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 142/358 (39%), Gaps = 73/358 (20%)
Query: 9 NLLDNPLTTEKCT----------VGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQL 58
L D+ + E CT G D LGGGI S+TE+V + GK+QF L+L
Sbjct: 89 QLADSTPSYEDCTELINRSACIATGDTHFDALLGGGIRVGSLTEVVGAASGGKSQFGLKL 148
Query: 59 TLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNP---CDYIFVQSVHS 115
L AQLPS+ +++ +E F RL +L+ D +P D I + +
Sbjct: 149 ALYAQLPSTSNIAPGGVIHITSEASFASGRLLELADQLELQGDRSPREFLDNIHLTHLRD 208
Query: 116 VDQLLDIMP-KIESFIKNSSN-------------------SRLPIRLIVIDSIAALFRSD 155
++ L I+ + I +N S LPIRL++IDS+AA R++
Sbjct: 209 METLEHIVSYSVPELINRHANRPSLGHDNDAREAKRQKKGSLLPIRLLIIDSLAAAARTE 268
Query: 156 FDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME---------------- 199
+D + + +RS + L+ +A + +AV+V NQV D
Sbjct: 269 WDTSKSGMFERSKSLIDLGEKLRCLAERYRIAVVVINQVTDDFRHQPGAPATLTPEATQS 328
Query: 200 ---------------------PNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRL 238
P E V + G + R ALG+ W NC+++RL
Sbjct: 329 DPAEEFLTSTPTMQGGLQSEMPAELVYARQHKYFGGQSARLRKTA-ALGLQWTNCISTRL 387
Query: 239 FLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREG 296
LSR EN V + RR ++F+P + E+++ + G
Sbjct: 388 MLSRISSLY--ENDGVTPAMTDETESKAQAYSARRRATLIFSPFAPHATLEWKLDKAG 443
>gi|16605548|emb|CAC86604.1| Rad51B protein [Physcomitrella patens]
gi|16605579|emb|CAC82997.1| Rad51B protein [Physcomitrella patens]
Length = 342
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 126/284 (44%), Gaps = 45/284 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G D L GGI SITE+ E SGK+Q C L ++ QLP GG +LY+
Sbjct: 104 QITTGSKEFDSILEGGIETGSITEIYGEFRSGKSQICHTLCVTCQLPLDQGGGEGKALYI 163
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ + N + D + ++ D ++ + S + + +R
Sbjct: 164 DAEGTFRPQRLLQIAEKY-GLNGQDVLDNVAYARAYNTDHQTKLLVEAASMM---AETRF 219
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+V+DS AL+R+D+ +L R F K + MA FG+AV+VTNQVV +
Sbjct: 220 A--LMVVDSATALYRTDYSG-RGELAARQFHLAKFLRGCQKMADEFGIAVVVTNQVVAQV 276
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ + NG + +G G A+ +RL + +
Sbjct: 277 DGSAMFNGPQFKPIG-------------GNIIAHASTTRLSVRK---------------- 307
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVER 302
G G E R + VV +P LA+ F+IT EGV V+
Sbjct: 308 -GRGEE--------RVIKVVASPCLAEQEARFQITNEGVVDVKE 342
>gi|219112089|ref|XP_002177796.1| Rad51 DNA recombination/repair protein [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217410681|gb|EEC50610.1| Rad51 DNA recombination/repair protein [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 363
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 137/319 (42%), Gaps = 63/319 (19%)
Query: 6 TPQNLLDNPLTTEKCTVG-CPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
T LL+ + + C + C +D LGGGI +TE+ G GKTQ+ +QL + A+L
Sbjct: 72 TAAALLEENVEGQGCIITFCRHVDTLLGGGIAMGELTEIAGPPGVGKTQWGMQLAVDARL 131
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLS------------------HTFRPSNDHNPCD 106
P++ GG++ ++Y+ TE F R H ++ +P D
Sbjct: 132 PNTFGGVAGETVYVDTEGSFSPERCHDMATSLVQHIEAGRRRRQEKGQKLQPMPAWFAPD 191
Query: 107 YIF----VQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDD 162
I V VH ++ + F+++ + P+RL+V+DS+A R+ N+ D
Sbjct: 192 TILQGIHVYRVHDEAAQTSVLYSLPKFLQDRQEAGTPVRLVVVDSMAFHHRAAPPNS--D 249
Query: 163 LKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPI 222
R+ + L +A G+AV+ NQ+ M +E +
Sbjct: 250 FVGRTRSLTSQAAFLTNLAAQSGIAVVAINQMTTKMTTSEASKQV--------------- 294
Query: 223 CPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPH 282
PALG +WA+ V +R+ LSR + + V R+ +V +P
Sbjct: 295 -PALGESWAHAVTTRILLSRP----ISDTNGV------------------RTCTLVKSPR 331
Query: 283 LADTSCEFEITREGVFGVE 301
LA S +++I + G+ GV+
Sbjct: 332 LASGSADYQILQCGIRGVD 350
>gi|332158421|ref|YP_004423700.1| DNA repair and recombination protein RadA [Pyrococcus sp. NA2]
gi|331033884|gb|AEC51696.1| DNA repair and recombination protein RadA [Pyrococcus sp. NA2]
Length = 354
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 43/297 (14%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G M L + + + G +D+ LGGGI +ITE+ E GSGKTQ L +
Sbjct: 99 LGTFMRADEYLKKRESIGRISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAV 158
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLL 120
QLP GGL+ S +++ TE F R+ +++ R + +I+V + + +
Sbjct: 159 MVQLPPEEGGLNGSVIWIDTENTFRPERIMEIARN-RGLDPDEVLKHIYVARAFNSNHQM 217
Query: 121 DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAM 180
++ + E IK NS P++L+++DS+ + FRS++ L +R K L +
Sbjct: 218 LLVQQAEDKIKELLNSEKPVKLLIVDSLTSHFRSEYIGR-GALAERQQKLAKHLADLHRL 276
Query: 181 AVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
A + +AV VTNQV P+ + G P P G A+ R++L
Sbjct: 277 ANLYEIAVFVTNQV--QARPD------------AFF--GDPTRPIGGHILAHSATLRVYL 320
Query: 241 SRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ G GG +R ++ APHL + F IT +G+
Sbjct: 321 RK--------------GKGG-----------KRVARLIDAPHLPEGEAVFRITEKGI 352
>gi|13878702|sp|Q9Y8J4.1|RADA_DESAM RecName: Full=DNA repair and recombination protein RadA
gi|4929344|gb|AAD33955.1|AF145465_1 recombination/repair protein RadA [Desulfurococcus amylolyticus
Z-533]
Length = 328
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 124/279 (44%), Gaps = 48/279 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G +D LGGG+ +ITE E GSGKTQ C QL+++ QL GGL+ ++Y+
Sbjct: 92 KITTGSKSLDELLGGGVETKTITEFFGEYGSGKTQICHQLSVNVQLTPEKGGLNGRAVYI 151
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ ++ D D I+ ++ D + I+ ++ +F+ +
Sbjct: 152 DTEGTFRWERIEAMARALGLDPD-KVMDNIYYMRAYNSDHQIAIVDELFTFVPKND---- 206
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
+RL+++DS+ + FR+++ +++ L + +++ +A + +AV+VTNQV +
Sbjct: 207 -VRLVILDSVTSHFRAEYPGREHLAERQQKLNSHLHQLMR-LAEAYNVAVVVTNQV--MA 262
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
P+ Y G P G A+ R+ L +
Sbjct: 263 RPD------------VFY--GDPTTAVGGHVLAHTPGVRIQLRK---------------- 292
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ +R VV APHL + F IT EG+
Sbjct: 293 ---------SKGNKRIARVVDAPHLPEGEVVFVITEEGI 322
>gi|20094878|ref|NP_614725.1| DNA repair and recombination protein RadA [Methanopyrus kandleri
AV19]
gi|19888111|gb|AAM02655.1| RadA recombinase [Methanopyrus kandleri AV19]
Length = 317
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 121/284 (42%), Gaps = 47/284 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D LGGG+PC +TE GSGK+Q QL ++ QLP GGL + ++++
Sbjct: 76 RITTGSSALDEILGGGVPCGELTEFAGPFGSGKSQIVFQLCVNVQLPEEEGGLESKAIFI 135
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE R+ ++ + +FV V SV++ + + + R
Sbjct: 136 DTEGTVSPGRIKGMAEAL-GLDPGEALRNVFVTQVRSVEEQMRAAEEAHKLCE-----RE 189
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-VDL 197
I L+VIDS+ A FR+++ + + D+ +R K L+ +A+ +AV+ TNQV VD+
Sbjct: 190 DIGLVVIDSLTAHFRAEY-SKLGDVSERQARLMKHVDQLRNLAMDHDVAVVFTNQVHVDI 248
Query: 198 MEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGG 257
+G GR P G A+ R+ L R + V
Sbjct: 249 EAATKG--------------KGRRYEPVGGTIVAHQATHRIMLRRAKGEV---------- 284
Query: 258 VGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
R ++ +P+L F IT EG+ VE
Sbjct: 285 ---------------RIARIIDSPYLPQREAAFRITEEGIRDVE 313
>gi|390939022|ref|YP_006402760.1| DNA repair and recombination protein RadA [Desulfurococcus
fermentans DSM 16532]
gi|390192129|gb|AFL67185.1| DNA repair and recombination protein RadA [Desulfurococcus
fermentans DSM 16532]
Length = 328
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 129/292 (44%), Gaps = 48/292 (16%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T + + L K T G +D LGGG+ +ITE E GSGKTQ C QL+++ QL
Sbjct: 79 TAREVKQERLNIGKITTGSKSLDELLGGGVETKTITEFFGEYGSGKTQICHQLSVNVQLT 138
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GGL+ ++Y+ TE F R+ ++ D D I+ ++ D + I+ +
Sbjct: 139 PEKGGLNGRAVYIDTEGTFRWERIEAMARALGLDPD-KVMDNIYYMRAYNSDHQIAIVDE 197
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ +F+ + ++L+V+DS+ + FR+++ +++ L + +++ +A +
Sbjct: 198 LFTFVPKND-----VKLVVLDSVTSHFRAEYPGREHLAERQQKLNSHLHQLMR-LAEAYN 251
Query: 186 LAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+AV+VTNQV + P+ Y G P G A+ R+ L ++
Sbjct: 252 VAVVVTNQV--MARPD------------VFY--GDPTTAVGGHVLAHTPGVRVQLRKS-- 293
Query: 246 FVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ +R VV APHL + F IT EG+
Sbjct: 294 -----------------------KGNKRIARVVDAPHLPEGEVVFVITEEGI 322
>gi|341582518|ref|YP_004763010.1| DNA repair and recombination protein RadA [Thermococcus sp. 4557]
gi|340810176|gb|AEK73333.1| DNA repair and recombination protein RadA [Thermococcus sp. 4557]
Length = 354
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 130/297 (43%), Gaps = 43/297 (14%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G M ++ T + + G +D+ +GGG+ +ITE+ E GSGKTQ L +
Sbjct: 99 IGTFMRADEYMERRSTIGRISTGSKSLDKLVGGGVETQAITEVFGEFGSGKTQLAHTLAV 158
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLL 120
QLP GGL S +++ TE F R+ Q++ D + ++ +S Q+L
Sbjct: 159 MVQLPEEEGGLHGSVVWIDTENTFRPERIRQIAEARGLDPDETLKNIYVARAFNSNHQML 218
Query: 121 DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAM 180
++ + E IK + + P++L+V+DS+ A FRS++ L +R K L +
Sbjct: 219 -LVERAEEIIKEKAETDRPVKLLVVDSLMAHFRSEYVGR-GTLAERQQKLAKHLADLHRI 276
Query: 181 AVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
A + +AV VTNQV +P+ + G P P G A+ R++L
Sbjct: 277 ADLYDIAVFVTNQV--QAKPD------------AFF--GDPTRPVGGHILAHSATLRIYL 320
Query: 241 SRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ G +G +R ++ +PHL + F IT +G
Sbjct: 321 RK----------------GKAG---------KRVARLIDSPHLPEGEAIFRITDKGA 352
>gi|197092359|gb|ACH42252.1| RAD51A recombination protein [Triticum aestivum]
gi|222154121|gb|ACM47240.1| RAD51 recombination protein [Triticum aestivum]
Length = 342
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 131/283 (46%), Gaps = 45/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITEL E SGKTQ C L ++ QLP GG +LY+
Sbjct: 104 QVTTGSRELDKILEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYI 163
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F N + + + ++ D ++ + S + + +
Sbjct: 164 DAEGTFRPQRLLQIADRF-GLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFA-- 220
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+VIDS AL+R+DF +L R K L+ +A FG+AV+++NQVV
Sbjct: 221 ---LMVIDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVISNQVV--- 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
V+G G ++ +G I P G A+ +RL+L +
Sbjct: 274 ---AQVDG------GAMF-AGPQIKPIGGNIMAHASTTRLYLRKGR-------------- 309
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+E+ +C+ VV +P LA+ F+I+ EGV V+
Sbjct: 310 ----AEERICK-------VVSSPCLAEAEARFQISPEGVTDVK 341
>gi|330833876|ref|YP_004408604.1| DNA repair and recombination protein RadA [Metallosphaera cuprina
Ar-4]
gi|329566015|gb|AEB94120.1| DNA repair and recombination protein RadA [Metallosphaera cuprina
Ar-4]
Length = 324
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 100/180 (55%), Gaps = 6/180 (3%)
Query: 16 TTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASS 75
+ +K T G +D LGGGI ++TEL E GSGKTQ C Q++++ QLPS GGLS +
Sbjct: 85 SVKKITTGSQALDGLLGGGIETRTMTELFGEFGSGKTQICHQVSVNVQLPSEKGGLSGKA 144
Query: 76 LYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSN 135
LY+ TE F R+ ++ + + ++++++ D + I+ +++ I +
Sbjct: 145 LYIDTEGTFRTERIKAMASALGLDPKEVLQNIMSIRAINT-DHQIAIVEELQDIISKDNT 203
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
I+L+V+DSI + FR+++ ++L R + L +A + LAV+VTNQV+
Sbjct: 204 ----IKLVVVDSITSHFRAEYSG-RENLAVRQQKLNRHLHQLVRLAEIYDLAVIVTNQVM 258
>gi|195391578|ref|XP_002054437.1| GJ22809 [Drosophila virilis]
gi|194152523|gb|EDW67957.1| GJ22809 [Drosophila virilis]
Length = 349
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 144/307 (46%), Gaps = 51/307 (16%)
Query: 4 PMTPQNLLDNP--LTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
P++ +L P L + T GC +D+C GGG+ ITE+ SG GK+Q LQL+LS
Sbjct: 70 PVSADSLFKIPARLKWSRVTFGCAALDQCTGGGVSIRGITEICGASGVGKSQVLLQLSLS 129
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQ 118
QLP GGL ++ TE FP RRL Q+S F P N IF++ +
Sbjct: 130 VQLPPRLGGLGKGVAFICTEDAFPSRRLLQISKAFEARYPEEQLNFLGNIFIEHQYESQP 189
Query: 119 LLD-IMPKIESFIKNSSNSRLPIRLIVIDSIAALFR--SDFDNTMDDLKKRSFLFFKISG 175
LL+ I ++ ++ S I LI+IDS+AA+FR +DF+ D++ ++
Sbjct: 190 LLECISNRLPQLLQAHS-----IGLIIIDSVAAIFRLYTDFEERARDMR-------RMVH 237
Query: 176 MLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVN 235
L + A + AV+ +NQ M E + + ++ C LG+ WAN
Sbjct: 238 ALLSYADKYDCAVVCSNQ----MTATEKADQKTLEDVPC-----------LGLQWANLGR 282
Query: 236 SRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITRE 295
+R+ +S+ + +Q++ T R L V+++P + EF IT +
Sbjct: 283 TRMRISKVPKQFKQGDQLL----------------TVRKLEVIYSPETPNAFTEFLITAD 326
Query: 296 GVFGVER 302
GV V +
Sbjct: 327 GVVNVPK 333
>gi|392348948|ref|XP_576058.4| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD51 homolog
2-like [Rattus norvegicus]
Length = 350
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 123/249 (49%), Gaps = 40/249 (16%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+PC S+TE+ G GKTQFC+ +++ A LP+ GGL + LY+ TE F
Sbjct: 90 LDEALHGGVPCGSLTEVTGPPGCGKTQFCIMMSVLATLPTRLGGLEGAVLYIDTESAFTA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L ++ ++ES + + ++L+
Sbjct: 150 ERLVEIAESRFPQYFNTEEKLLLTSSRVHLCQELTCEGLLQRLESLEEEIISK--GVKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-------- 194
++DSIA++ R +FD + ++K+R+ K + +LK ++ F + V++TNQ+
Sbjct: 208 IVDSIASVVRKEFDPQLQGNIKERNKFLGKGASLLKYLSGEFSVPVILTNQITTHLSGAL 267
Query: 195 ---------VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNS-----RLFL 240
D + P+EG G+ CL + +G W + + + LF
Sbjct: 268 PSQADLVSPADDLSPSEG-----KGSSSCLXA-------GIGRCWGHSIQTAIYLKYLFF 315
Query: 241 SRNEDFVVR 249
RN+ + +
Sbjct: 316 QRNQILIAK 324
>gi|171689280|ref|XP_001909580.1| hypothetical protein [Podospora anserina S mat+]
gi|170944602|emb|CAP70713.1| unnamed protein product [Podospora anserina S mat+]
Length = 500
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 106/213 (49%), Gaps = 31/213 (14%)
Query: 15 LTTEKCTVGC--PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLS 72
L+++ T+ P +D LGGGIP ITE+ ES +GKTQF L L L+ QLP H GLS
Sbjct: 110 LSSQWITISTLDPHLDLALGGGIPTGHITEITGESAAGKTQFLLTLLLAVQLPPPH-GLS 168
Query: 73 ASSLYLHTEFPFPMRRLHQ----------LSHTFRPSNDHNPCDYIFVQSVHSVDQLLDI 122
+LY+ TE P RRL Q L + RP+ D + S D +L
Sbjct: 169 RPALYISTEAPLSTRRLSQMITENPLFSTLPRSARPTLDK--IISTTTPDLESQDHILTY 226
Query: 123 MPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFD------NTMDDLKKRSFLFFKISGM 176
+E +N + L++IDS+AA +R++F+ N ++ R+ K+
Sbjct: 227 QAPVEIARRN-------VGLLIIDSVAANYRAEFERPTPNSNLSSNMGARTNELIKLGMH 279
Query: 177 LKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRV 209
LK +A + LAV+V+NQV D G GL+
Sbjct: 280 LKDLAEKYNLAVVVSNQVADRF---SGTGGLKT 309
>gi|300176270|emb|CBK23581.2| unnamed protein product [Blastocystis hominis]
Length = 341
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 88/153 (57%), Gaps = 8/153 (5%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T + LL T T GC ID+CL GGIP +SITE+ ES SGK+Q +QL ++ L
Sbjct: 183 TAEELLQQQQTA-FLTTGCRSIDKCLKGGIPLHSITEITGESSSGKSQLAIQLAVNCILS 241
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDY----IFVQS-VHSVDQLL 120
G++ +LY+ TE F +RL +S+ F + D IF+++ V S + L+
Sbjct: 242 EKDRGVNGKALYIDTESSFSTQRLADISNAFCSRHPEFSIDQISENIFIENKVRSYEDLV 301
Query: 121 DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFR 153
++ +E +KN SNS IR+++IDSI +LFR
Sbjct: 302 SLLDSLEDRLKNPSNS--AIRVVIIDSITSLFR 332
>gi|222154117|gb|ACM47238.1| RAD51 recombination protein [Triticum aestivum]
Length = 343
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 131/283 (46%), Gaps = 45/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITEL E SGKTQ C L ++ QLP GG +LY+
Sbjct: 105 QVTTGSRELDKILEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYI 164
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F N + + + ++ D ++ + S + + +
Sbjct: 165 DAEGTFRPQRLLQIADRF-GLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFA-- 221
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+VIDS AL+R+DF +L R K L+ +A FG+AV+++NQVV
Sbjct: 222 ---LMVIDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVISNQVV--- 274
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
V+G G ++ +G I P G A+ +RL+L +
Sbjct: 275 ---AQVDG------GAMF-AGPQIKPIGGNIMAHASTTRLYLRKGR-------------- 310
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+E+ +C+ VV +P LA+ F+I+ EGV V+
Sbjct: 311 ----AEERICK-------VVSSPCLAEAEARFQISPEGVTDVK 342
>gi|198438041|ref|XP_002130341.1| PREDICTED: similar to Rad51 homolog c [Ciona intestinalis]
Length = 391
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 113/226 (50%), Gaps = 35/226 (15%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGG+ SITE+ ES +GKTQ C QL +A + + +GG+ ++Y+ TE F
Sbjct: 26 LDSLLGGGVKVGSITEIAGESSTGKTQLCFQLATNAHIHTKYGGVGGETVYIDTEMTFKT 85
Query: 87 RRLHQLS----HTFRPSNDHNPCDY------IFVQSVHSVDQLLDIMPKIESFIKNSSNS 136
R+ Q++ H F + I++ + QLL + ++ F+K S
Sbjct: 86 ERIGQIAQAMVHHFERTKHATDMSADTVLSGIYLFRCIKMVQLLAVSYQLFEFVK----S 141
Query: 137 RLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
++L+++DSIA R++ +D+K R+ L ++ L+ +A +AV++ NQV
Sbjct: 142 HPKVKLVIVDSIAQXXRAE-----EDMKIRNKLLNNLAANLRKIASLLNVAVVLVNQVTT 196
Query: 197 LMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ GN C+ PALG +W+N +++LFL +
Sbjct: 197 RFD--------EYGN-SCM-------VPALGESWSNIPHTKLFLYK 226
>gi|162457934|ref|NP_001104919.1| DNA repair protein RAD51 homolog B [Zea mays]
gi|55976630|sp|Q9XED7.1|R51A2_MAIZE RecName: Full=DNA repair protein RAD51 homolog B; AltName:
Full=Rad51-like protein B; Short=RAD51B; AltName:
Full=ZmRAD51b
gi|4886754|gb|AAD32030.1|AF079429_1 RAD51 homolog RAD51B [Zea mays]
gi|223945143|gb|ACN26655.1| unknown [Zea mays]
gi|414878278|tpg|DAA55409.1| TPA: DNA repair protein RAD51-like protein B [Zea mays]
Length = 340
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 128/283 (45%), Gaps = 45/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E SGKTQ C L ++ QLP GG +LY+
Sbjct: 102 QLTTGSRELDQILDGGIETGSITEMYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYI 161
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +R+ Q++ F N + + + ++ D ++ + S + +
Sbjct: 162 DAEGTFRPQRILQIADRF-GLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETR---- 216
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+V+DS AL+R+DF +L R K L+ +A FG+AV++TNQVV +
Sbjct: 217 -FALMVVDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQV 274
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G +G I P G A+ +RLFL +
Sbjct: 275 D-------------GAAMFAGPQIKPIGGNIMAHASTTRLFLRK---------------- 305
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G G E+ +C+ V+ +P LA+ F+I+ EGV V+
Sbjct: 306 -GRG-EERICK-------VISSPCLAEAEARFQISSEGVTDVK 339
>gi|400202049|gb|AFP73608.1| DNA repair protein RAD51 [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 130/283 (45%), Gaps = 45/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +DR L GGI SITEL E GKTQ C L ++ QLP GG +LY+
Sbjct: 105 QVTTGSRELDRILDGGIETGSITELYGEFRCGKTQLCHTLCVTCQLPLDQGGGEGKALYI 164
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F N + + + ++ D ++ + S + + +
Sbjct: 165 DAEGTFRPQRLLQIADRF-GLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFA-- 221
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+VIDS AL+R+DF +L R K L+ +A FG+AV+++NQVV
Sbjct: 222 ---LMVIDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVISNQVV--- 274
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
V+G G ++ +G I P G A+ +RL+L +
Sbjct: 275 ---AQVDG------GAMF-AGPQIKPIGGNIMAHASTTRLYLRKGR-------------- 310
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+E+ +C+ VV +P LA+ F+I+ EGV V+
Sbjct: 311 ----AEERICK-------VVSSPCLAEAEARFQISPEGVTDVK 342
>gi|312136410|ref|YP_004003747.1| DNA repair and recombination protein rada [Methanothermus fervidus
DSM 2088]
gi|311224129|gb|ADP76985.1| DNA repair and recombination protein RadA [Methanothermus fervidus
DSM 2088]
Length = 311
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 47/279 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D +GGGI SITE+ E GSGK+Q +L ++ QLP GGL A ++++
Sbjct: 78 RITTGSKALDDLIGGGIETQSITEVFGEFGSGKSQLAHELAVTVQLPIEKGGLEAEAVFI 137
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ F+ + ++ +S Q+L + K+ I+ N
Sbjct: 138 DTENTFRPERIEQIAKHFKLDTKKVLKNIYVARAFNSSHQIL-MAEKVNDLIQEGKN--- 193
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
IRL+++DS+ + FR+++ + L R + L+ +A + +AV VTNQV
Sbjct: 194 -IRLVIVDSLTSHFRAEYVG-REALATRQQKLNQHLHTLQNLATTYNIAVFVTNQV--QA 249
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
P+ + G P G + R++L +
Sbjct: 250 RPD------------AFF--GSPTKAIGGHVLGHAATYRIWLKK---------------- 279
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
G +G +R +V +P+L + C F+IT EG+
Sbjct: 280 GAAG---------KRIARLVDSPYLPEGECVFKITEEGI 309
>gi|212532279|ref|XP_002146296.1| DNA repair protein (Rad57), putative [Talaromyces marneffei ATCC
18224]
gi|210071660|gb|EEA25749.1| DNA repair protein (Rad57), putative [Talaromyces marneffei ATCC
18224]
Length = 571
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 99/183 (54%), Gaps = 21/183 (11%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P +D LGGGIP +TE+ ESGSGKTQF L L L AQLPS H GL ++Y+ TE
Sbjct: 117 PALDDLLGGGIPTGYLTEITGESGSGKTQFLLNLLLVAQLPSPH-GLGRKAIYISTEASL 175
Query: 85 PMRRLHQ--LSHTF--------RPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSS 134
RL Q LSH + RPS V S+ ++D L+ I ++ +
Sbjct: 176 STPRLSQILLSHPYLSKLPAAERPS-------LANVLSITAID--LETQDHILNYQLPVA 226
Query: 135 NSRLPIRLIVIDSIAALFRSDF-DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQ 193
SR + L+VIDSIAA +R++ N+M L RS K+ ML+ +A +A++V NQ
Sbjct: 227 ISRYNVGLVVIDSIAANYRAEHASNSMQSLSARSGELAKLGHMLRNLAAREDIAIVVANQ 286
Query: 194 VVD 196
V D
Sbjct: 287 VSD 289
>gi|119719931|ref|YP_920426.1| Rad51-like [Thermofilum pendens Hrk 5]
gi|119525051|gb|ABL78423.1| Rad51-like protein [Thermofilum pendens Hrk 5]
Length = 315
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 96/181 (53%), Gaps = 11/181 (6%)
Query: 18 EKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLY 77
E T G +D L GG+ I E E GSGKTQ C QL+++AQLP S GGL +Y
Sbjct: 83 ESLTTGVKALDELLEGGLVTQEIYEFAGEYGSGKTQLCHQLSVTAQLPPSRGGLGGKVVY 142
Query: 78 LHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK-IESFIKNSSNS 136
+ TE F R+ +++ F + ++V SVD+L +++ K ++ +K
Sbjct: 143 VDTEGTFSPSRIERIAERF---GVEGALEGVYVARPISVDELEELVIKGLKPLLKGG--- 196
Query: 137 RLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
++L+VIDS+ AL+R+ F ++ + + + LK +A + + V++TNQVV
Sbjct: 197 ---VKLVVIDSVIALYRAQFRGREWLAMRQQRINYALD-WLKRLARVYSIVVVITNQVVS 252
Query: 197 L 197
+
Sbjct: 253 V 253
>gi|15897194|ref|NP_341799.1| DNA repair and recombination protein RadA [Sulfolobus solfataricus
P2]
gi|284174439|ref|ZP_06388408.1| DNA repair and recombination protein RadA [Sulfolobus solfataricus
98/2]
gi|384433707|ref|YP_005643065.1| DNA repair and recombination protein RadA [Sulfolobus solfataricus
98/2]
gi|14286170|sp|Q55075.2|RADA_SULSO RecName: Full=DNA repair and recombination protein RadA
gi|126030236|pdb|2DFL|A Chain A, Crystal Structure Of Left-Handed Rada Filament
gi|160286393|pdb|2Z43|A Chain A, Structure Of A Twinned Crystal Of Rada
gi|160286394|pdb|2Z43|B Chain B, Structure Of A Twinned Crystal Of Rada
gi|160286395|pdb|2Z43|C Chain C, Structure Of A Twinned Crystal Of Rada
gi|226438154|pdb|2ZUB|A Chain A, Left Handed Rada
gi|226438155|pdb|2ZUB|B Chain B, Left Handed Rada
gi|226438156|pdb|2ZUC|A Chain A, Crystal Structure Of Left-Handed Rada Filament
gi|226438157|pdb|2ZUC|B Chain B, Crystal Structure Of Left-Handed Rada Filament
gi|226438158|pdb|2ZUD|A Chain A, Crystal Structure Of Left-Handed Rada Filament
gi|226438159|pdb|2ZUD|B Chain B, Crystal Structure Of Left-Handed Rada Filament
gi|13813387|gb|AAK40589.1| DNA repair protein radA (radA) [Sulfolobus solfataricus P2]
gi|261601861|gb|ACX91464.1| DNA repair and recombination protein RadA [Sulfolobus solfataricus
98/2]
Length = 324
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 126/287 (43%), Gaps = 47/287 (16%)
Query: 15 LTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSAS 74
+ +K + G +D L GGI ++TE E GSGKTQ C QL+++ QLP GGLS
Sbjct: 84 MNVKKISTGSQALDGLLAGGIETRTMTEFFGEFGSGKTQLCHQLSVNVQLPPEKGGLSGK 143
Query: 75 SLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSS 134
++Y+ TE F R+ ++ D+ + +++++++ D + I+ ++ +
Sbjct: 144 AVYIDTEGTFRWERIENMAKALGLDIDNVMNNIYYIRAINT-DHQIAIVDDLQELVSKDP 202
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+ I+LIV+DS+ + FR+++ ++L R K L +A + +AV++TNQV
Sbjct: 203 S----IKLIVVDSVTSHFRAEYPGR-ENLAVRQQKLNKHLHQLTRLAEVYDIAVIITNQV 257
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
+ P+ Y G P G + R+ L +
Sbjct: 258 --MARPD------------MFY--GDPTVAVGGHTLYHVPGIRIQLKK------------ 289
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
R RR VV APHL + F +T EG+ E
Sbjct: 290 -------------SRGNRRIARVVDAPHLPEGEVVFALTEEGIRDAE 323
>gi|357469749|ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medicago truncatula]
gi|355506214|gb|AES87356.1| DNA repair protein RAD51-like protein [Medicago truncatula]
Length = 347
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 122/259 (47%), Gaps = 44/259 (16%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T ++L+ + T C +D LGGGI C +TE+ G GKTQ +QL ++ Q+P
Sbjct: 75 TAWDMLNEERFSSLITTSCLDLDNILGGGINCKEVTEIGGVPGIGKTQIGIQLAVNVQIP 134
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQL-----------SHTFRPSND--------HNPCD 106
+GGL ++Y+ TE F + R+ Q+ SH F N ++ +
Sbjct: 135 LDYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDLSEYSHHFYKDNQAFGVKMHPNSILE 194
Query: 107 YIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKR 166
IF V S + + ++ ++ F+ + +++I+IDS+ FR DF DD+ R
Sbjct: 195 NIFYFRVCSYTEQIALVNYLDKFVTEHKD----VKIIIIDSVTFHFRQDF----DDMALR 246
Query: 167 SFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPAL 226
+ L ++S L +A F LAV++ NQV + EG L + AL
Sbjct: 247 TRLLGEMSLKLMKLAKNFSLAVVMLNQVT--TKHIEGSFQLTL---------------AL 289
Query: 227 GIAWANCVNSRLFLSRNED 245
G +W++ +R+ L N+D
Sbjct: 290 GDSWSHSCTNRIILYWNDD 308
>gi|308161798|gb|EFO64232.1| Dmc1b [Giardia lamblia P15]
Length = 368
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 129/297 (43%), Gaps = 51/297 (17%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T L ++ + GC + LGGG+ SITE+ E +GKTQ C L ++AQL
Sbjct: 116 ITGSEALKKREQVKRLSTGCADFNALLGGGVETMSITEVFGEFRTGKTQLCHTLAVTAQL 175
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLD--- 121
P S GG + ++Y+ TE F ++ ++ F N D I V V++ +Q ++
Sbjct: 176 PVSKGGGAGKTVYIDTEGTFRPEKVAPIAERF-GLNPKKALDNIMVARVYTHEQQIECIT 234
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+PK+ I+N L+++DS+ ALFR DF + ++ L +SG+ K +A
Sbjct: 235 ALPKL--MIENQ------FSLVIVDSLTALFRVDFTGRGELADRQQKLGQHLSGLAK-LA 285
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F LA+ VTNQV+ ++ G + P P G A+ +RL+L
Sbjct: 286 DEFNLAIFVTNQVMAQVD-------------GAAMFTADPKKPIGGHILAHASTTRLYLR 332
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
+ R R + +P LA+ + I EG+
Sbjct: 333 KG-------------------------RGDTRVAKIYDSPSLAEGEASYSIAAEGII 364
>gi|253741848|gb|EES98708.1| Dmc1b [Giardia intestinalis ATCC 50581]
Length = 368
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 125/294 (42%), Gaps = 45/294 (15%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T L ++ + GC + LGGG+ SITE+ E +GKTQ C L ++AQL
Sbjct: 116 ITGSEALKKRAQVKRLSTGCTDFNTLLGGGVETMSITEVFGEFRTGKTQLCHTLAVTAQL 175
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMP 124
P S GG ++Y+ TE F ++ ++ F N D I V V++ +Q ++ +
Sbjct: 176 PVSKGGGGGKTVYIDTEGTFRPEKVAPIAERF-GLNPKKALDNIIVARVYTHEQQIECIT 234
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
+ + S L++IDSI ALFR DF + ++ L ++G+ K +A F
Sbjct: 235 ALPKLMIESQ-----FALVIIDSITALFRVDFTGRGELADRQQKLGQHLAGLAK-LADEF 288
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
LA+ VTNQV+ ++ G + P P G A+ +RL+L +
Sbjct: 289 NLAIFVTNQVMAQVD-------------GAAMFTADPKKPIGGHILAHASTTRLYLRKG- 334
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
R R + +P LA+ + I EG+
Sbjct: 335 ------------------------RGDTRVAKIYDSPSLAEGEASYSIAAEGII 364
>gi|14520459|ref|NP_125934.1| DNA repair and recombination protein RadA [Pyrococcus abyssi GE5]
gi|5457674|emb|CAB49165.1| radA DNA repair protein rad51 : DNA repair and recombination
protein radA [Pyrococcus abyssi GE5]
Length = 356
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 130/297 (43%), Gaps = 43/297 (14%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G M L + + + G +D+ LGGGI +ITE+ E GSGKTQ L +
Sbjct: 101 LGTFMRADEYLKKRESIGRISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAV 160
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLL 120
QLP GGL+ S +++ TE F R+ +++ R + +I+V + + +
Sbjct: 161 MVQLPPEEGGLNGSVIWIDTENTFRPERIREIAKN-RGLDPDEVLKHIYVARAFNSNHQM 219
Query: 121 DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAM 180
++ + E IK N+ P++L+++DS+ + FRS++ L +R K L +
Sbjct: 220 LLVQQAEDKIKELLNTDKPVKLLIVDSLTSHFRSEYIGR-GALAERQQKLAKHLADLHRL 278
Query: 181 AVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
A + +AV VTNQV P+ + G P P G A+ R++L
Sbjct: 279 ANLYEIAVFVTNQV--QARPD------------AFF--GDPTRPIGGHILAHSATLRVYL 322
Query: 241 SRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ G GG +R ++ APHL + F IT +G+
Sbjct: 323 RK--------------GKGG-----------KRVARLIDAPHLPEGEAVFRITEKGI 354
>gi|227828152|ref|YP_002829932.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
M.14.25]
gi|227830859|ref|YP_002832639.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
L.S.2.15]
gi|229579745|ref|YP_002838144.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
Y.G.57.14]
gi|229581586|ref|YP_002839985.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
Y.N.15.51]
gi|229585381|ref|YP_002843883.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
M.16.27]
gi|238620342|ref|YP_002915168.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
M.16.4]
gi|284998366|ref|YP_003420134.1| DNA repair or recombination protein RadA [Sulfolobus islandicus
L.D.8.5]
gi|385773822|ref|YP_005646389.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
HVE10/4]
gi|385776457|ref|YP_005649025.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
REY15A]
gi|259551812|sp|C3MZK6.1|RADA_SULIA RecName: Full=DNA repair and recombination protein RadA
gi|259551815|sp|C4KIT6.1|RADA_SULIK RecName: Full=DNA repair and recombination protein RadA
gi|259551818|sp|C3MRI1.1|RADA_SULIL RecName: Full=DNA repair and recombination protein RadA
gi|259551822|sp|C3MY77.1|RADA_SULIM RecName: Full=DNA repair and recombination protein RadA
gi|259551825|sp|C3NFU5.1|RADA_SULIN RecName: Full=DNA repair and recombination protein RadA
gi|259551829|sp|C3N7M8.1|RADA_SULIY RecName: Full=DNA repair and recombination protein RadA
gi|227457307|gb|ACP35994.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
L.S.2.15]
gi|227459948|gb|ACP38634.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
M.14.25]
gi|228010460|gb|ACP46222.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
Y.G.57.14]
gi|228012302|gb|ACP48063.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
Y.N.15.51]
gi|228020431|gb|ACP55838.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
M.16.27]
gi|238381412|gb|ACR42500.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
M.16.4]
gi|284446262|gb|ADB87764.1| DNA repair or recombination protein RadA [Sulfolobus islandicus
L.D.8.5]
gi|323475205|gb|ADX85811.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
REY15A]
gi|323477937|gb|ADX83175.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
HVE10/4]
Length = 324
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 126/287 (43%), Gaps = 47/287 (16%)
Query: 15 LTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSAS 74
+ +K + G +D L GGI ++TE E GSGKTQ C QL+++ QLP GGLS
Sbjct: 84 MNVKKISTGSQALDGLLAGGIETRTMTEFFGEFGSGKTQLCHQLSVNVQLPPEKGGLSGK 143
Query: 75 SLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSS 134
++Y+ TE F R+ ++ D+ + +++++++ D + I+ ++ +
Sbjct: 144 AVYIDTEGTFRWERIENMAKALGLDIDNVMNNIYYIRAINT-DHQIAIVDDLQELVSKDP 202
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+ I+LIV+DS+ + FR+++ ++L R K L +A + +AV++TNQV
Sbjct: 203 S----IKLIVVDSVTSHFRAEYPGR-ENLAVRQQKLNKHLHQLTRLAEVYDIAVIITNQV 257
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
+ P+ Y G P G + R+ L +
Sbjct: 258 --MARPD------------MFY--GDPTVAVGGHTLYHVPGIRIQLKK------------ 289
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
R RR VV APHL + F +T EG+ E
Sbjct: 290 -------------SRGNRRIARVVDAPHLPEGEVVFALTEEGIRDAE 323
>gi|412986207|emb|CCO17407.1| spindle D [Bathycoccus prasinos]
Length = 369
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 131/313 (41%), Gaps = 60/313 (19%)
Query: 23 GCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEF 82
G +D L GG+P +ITE VA +GSGKTQ CL L P + GGL AS +++ TE
Sbjct: 81 GVKTLDEALLGGVPVGTITEFVAPAGSGKTQMCLGLVAQTCAPKNFGGLDASVVFVDTEQ 140
Query: 83 PFPMRRLHQLSHT----------FRPSNDHNP-------------------CDYIFVQSV 113
F RL +++ ++ N+++ + +FV +
Sbjct: 141 TFSSNRLAEIAKKRFPEIYDKDYYKDGNNNDSVSNFGGMDKDAEMRLEKLLAEKVFVVTP 200
Query: 114 HSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRS-----DFDNTMDDLKKRSF 168
S+ +L + ++ + S +LIVIDS+A L R+ ++ + L KR
Sbjct: 201 QSLQELKVRIENLKPALTQSD-----AKLIVIDSVARLARAEGGIGAGSSSSESLVKRQN 255
Query: 169 LFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGI 228
+ I+ LK A +AV+VTNQV N + + S + ALG
Sbjct: 256 ILSSIAAALKRHAEQLNVAVVVTNQVTTNTNINSNYHNSNDPAKANMVSRDSQVAAALGT 315
Query: 229 AWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSC 288
WA+CVN R+ +S G + G +R + VV +P A +
Sbjct: 316 KWAHCVNVRISMS--------------GAIDGKAD-------GKREMRVVKSPRTALSRF 354
Query: 289 EFEITREGVFGVE 301
+ IT G ++
Sbjct: 355 LYRITASGCASID 367
>gi|325968380|ref|YP_004244572.1| DNA repair and recombination protein RadA [Vulcanisaeta moutnovskia
768-28]
gi|323707583|gb|ADY01070.1| DNA repair and recombination protein RadA [Vulcanisaeta moutnovskia
768-28]
Length = 358
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 90/174 (51%), Gaps = 6/174 (3%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T L + + + G +D LGGGI +ITELV E GSGKTQ C QL++ QL
Sbjct: 112 ITAYELYEKRRGIRRISTGVKALDELLGGGIETKAITELVGEFGSGKTQLCHQLSIIVQL 171
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMP 124
P GGL A +LY+ TE F R+ Q++ +R + I ++ D + I+
Sbjct: 172 PEDRGGLKAKALYVDTENTFRPERIMQIA-KYRGLDPQEALRNILYARAYNSDHQMMIIE 230
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLK 178
+ + I+ + I LIVIDS+ A FRS++ + +++ L I+ +L+
Sbjct: 231 ESKKIIEKEN-----IGLIVIDSLVAHFRSEYPGRENLAERQQKLNHHIAQLLR 279
>gi|387912860|sp|Q9V233.2|RADA_PYRAB RecName: Full=DNA repair and recombination protein RadA
gi|380740983|tpe|CCE69617.1| TPA: DNA repair and recombination protein RadA [Pyrococcus abyssi
GE5]
Length = 353
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 130/297 (43%), Gaps = 43/297 (14%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G M L + + + G +D+ LGGGI +ITE+ E GSGKTQ L +
Sbjct: 98 LGTFMRADEYLKKRESIGRISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAV 157
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLL 120
QLP GGL+ S +++ TE F R+ +++ R + +I+V + + +
Sbjct: 158 MVQLPPEEGGLNGSVIWIDTENTFRPERIREIAKN-RGLDPDEVLKHIYVARAFNSNHQM 216
Query: 121 DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAM 180
++ + E IK N+ P++L+++DS+ + FRS++ L +R K L +
Sbjct: 217 LLVQQAEDKIKELLNTDKPVKLLIVDSLTSHFRSEYIG-RGALAERQQKLAKHLADLHRL 275
Query: 181 AVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
A + +AV VTNQV P+ + G P P G A+ R++L
Sbjct: 276 ANLYEIAVFVTNQV--QARPD------------AFF--GDPTRPIGGHILAHSATLRVYL 319
Query: 241 SRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ G GG +R ++ APHL + F IT +G+
Sbjct: 320 RK--------------GKGG-----------KRVARLIDAPHLPEGEAVFRITEKGI 351
>gi|159119566|ref|XP_001710001.1| Dmc1b [Giardia lamblia ATCC 50803]
gi|30578213|gb|AAP35103.1|AF485824_1 DMC1-B [Giardia intestinalis]
gi|33667820|gb|AAQ24510.1| Dmc1b [Giardia intestinalis]
gi|157438119|gb|EDO82327.1| Dmc1b [Giardia lamblia ATCC 50803]
Length = 368
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 128/297 (43%), Gaps = 51/297 (17%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T L ++ + GC + LGGG+ SITE+ E +GKTQ C L ++AQL
Sbjct: 116 ITGSEALKKRQQVKRLSTGCADFNALLGGGVETMSITEVFGEFRTGKTQLCHTLAVTAQL 175
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLD--- 121
P S GG ++Y+ TE F ++ ++ F N D I V V++ +Q ++
Sbjct: 176 PVSKGGGGGKTVYIDTEGTFRPEKVAPIAERF-GLNPKKALDNIMVARVYTHEQQIECIT 234
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+PK+ ++N L+++DS+ ALFR DF + ++ L +SG+ K +A
Sbjct: 235 ALPKL--MVENQ------FSLVIVDSLTALFRVDFTGRGELADRQQKLGQHLSGLAK-LA 285
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F LAV VTNQV+ ++ G + P P G A+ +RL+L
Sbjct: 286 DEFNLAVFVTNQVMAQVD-------------GAAMFTADPKKPIGGHILAHASTTRLYLR 332
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
+ R R + +P LA+ + I EG+
Sbjct: 333 KG-------------------------RGDTRVAKIYDSPSLAEGEASYSIAAEGII 364
>gi|300176345|emb|CBK23656.2| unnamed protein product [Blastocystis hominis]
Length = 316
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 122/277 (44%), Gaps = 46/277 (16%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
+ GC +DR LGGG+ SITEL E +GKTQ C L + QLP S GG +LY+ T
Sbjct: 81 STGCKELDRILGGGMETGSITELYGEFRTGKTQMCHTLCVICQLPISQGGGEGKALYIDT 140
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL Q+S F + D + D + ++ + ++ + + + S +
Sbjct: 141 ENTFRPERLIQISKRFGLNPD-DVLDNVTYARAYNSEHQQQLLIQAAALMAESRYA---- 195
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+++DS ALFR+D+ +L R + L+ +A FG+AV++TNQVV P
Sbjct: 196 -LVIVDSATALFRTDYTG-RGELSTRQQSLAQFLRGLQKLADEFGVAVVITNQVV--ANP 251
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGG 260
+ GV + P+ P G A+ +RL +
Sbjct: 252 DSGV------------FAKDPLKPIGGNIIAHASQTRLRFKKG----------------- 282
Query: 261 SGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
R T R VV +P L + F I+ EG+
Sbjct: 283 --------RGTTRICKVVDSPCLGEEEASFGISDEGI 311
>gi|157109848|ref|XP_001650848.1| spindle-b recombination protein spn-b [Aedes aegypti]
gi|108878885|gb|EAT43110.1| AAEL005399-PA [Aedes aegypti]
Length = 266
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 133/297 (44%), Gaps = 59/297 (19%)
Query: 8 QNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP-S 66
Q+L + K +G +D+ GGGI I E+ + GSGKTQ CL L L+ Q+
Sbjct: 18 QSLKAHHQRWRKIKLGVDALDQLTGGGISSRGIVEIAGDPGSGKTQMCLHLALACQMQCE 77
Query: 67 SHGGLSASSLYLHTEFPFPMRRLHQLSHTFR-----PSNDHNPCDYIFVQSVHSVDQLLD 121
+ G+ +Y+ TE PFP +RL Q+ + + D IFV+ +++ L +
Sbjct: 78 TRKGV----VYISTEHPFPSKRLVQMEQVMKRNLRITEDSMKFTDNIFVEHLNTAVALEE 133
Query: 122 -IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAM 180
+ ++ ++N+ PI L++IDSI A + ++ N +D R+ F ++ L ++
Sbjct: 134 CVNQRLPILLENN-----PISLLIIDSITAAY-TEEQNFVD----RAHSFRRVVNALHSL 183
Query: 181 AVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
F VL TNQV +++ + I PA+G+AW + V++R L
Sbjct: 184 QDKFDFGVLCTNQVRSVVDSS--------------TLDDERIVPAMGLAWGSLVHTRFQL 229
Query: 241 SRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
SR GSG R ++F+P A C F IT G+
Sbjct: 230 SRTP---------------GSG---------ERRCQLLFSPMAAPGHCSFAITEAGI 262
>gi|347970475|ref|XP_003436585.1| AGAP013180-PA [Anopheles gambiae str. PEST]
gi|333466691|gb|EGK96339.1| AGAP013180-PA [Anopheles gambiae str. PEST]
Length = 266
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 110/234 (47%), Gaps = 42/234 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQ--LPSSHGGLSASSL 76
K + G P+ DR GGGI I EL + GSGKTQ L+L L+AQ +P+S +
Sbjct: 24 KVSFGVPVFDRLTGGGIGARGIFELAGDPGSGKTQIALKLALTAQRTVPNS------CVV 77
Query: 77 YLHTEFPFPMRRLHQLSHTFRPSN-------DHNPCDYIFVQSVHSVDQLLDIMPKIESF 129
Y+ TE FP RRL Q+ ++ DHN D+I V+ + L D +PK+
Sbjct: 78 YICTEHRFPSRRLLQMEAEYKRQQSADDAVRDHNFVDHILVEHPTLMACLFDRLPKLLES 137
Query: 130 IKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVL 189
K I +++IDSIA+ F + D R+ F I L + A+
Sbjct: 138 TK--------ISVLIIDSIASPFVEE-----RDYISRAETFRSIVHRLHQLQERHNFAIC 184
Query: 190 VTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRN 243
VTNQV +++ + + V PALG+AW+ V++RL LSR
Sbjct: 185 VTNQVRSVIDSSTLDDQRNV--------------PALGLAWSTLVHTRLQLSRT 224
>gi|335772663|gb|AEH58136.1| DNA repair protein RAD51-like protein 2 [Equus caballus]
Length = 284
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 98/175 (56%), Gaps = 12/175 (6%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPIDMGGLEGAVVYIDTEAAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VH-----SVDQLLDIMPKIESFIKNSSNSRLPI 140
RL +++ + PS +N + S VH S D++L + +E I + +
Sbjct: 150 ERLVEIAESRFPSYFNNEDKLLLTSSNVHLYRELSCDEVLQRVESLEEEIISKG-----V 204
Query: 141 RLIVIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+L++IDS+A++ R +FD + ++++R+ + + LK +A F + V++TNQ+
Sbjct: 205 KLVIIDSVASVVRKEFDTQLQGNMRERNKFLAREAASLKYLAEEFSIPVILTNQI 259
>gi|307596612|ref|YP_003902929.1| DNA repair and recombination protein RadA [Vulcanisaeta distributa
DSM 14429]
gi|307551813|gb|ADN51878.1| DNA repair and recombination protein RadA [Vulcanisaeta distributa
DSM 14429]
Length = 388
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 90/174 (51%), Gaps = 6/174 (3%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T L + + + G +D LGGGI +ITELV E GSGKTQ C QL++ QL
Sbjct: 142 ITAYELYEKRRGIRRISTGVKSLDELLGGGIETKAITELVGEFGSGKTQLCHQLSVMVQL 201
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMP 124
P GGL A +LY+ TE F R+ Q++ +R + I ++ D + I+
Sbjct: 202 PEDKGGLKAKALYVDTENTFRPERIMQMA-KYRGLDPQEALKNILYARAYNSDHQMMIIE 260
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLK 178
+ + I+ + I LIVIDS+ A FRS++ + +++ L I+ +L+
Sbjct: 261 ESKKIIEKEN-----IGLIVIDSLVAHFRSEYPGRENLAERQQKLNHHIAQLLR 309
>gi|296827198|ref|XP_002851132.1| DNA repair protein RAD57 [Arthroderma otae CBS 113480]
gi|238838686|gb|EEQ28348.1| DNA repair protein RAD57 [Arthroderma otae CBS 113480]
Length = 604
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 101/182 (55%), Gaps = 12/182 (6%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
PI+D L GGI +TE+ ESG+GKTQF L L LS QLP+ H GLS ++LY+ TE
Sbjct: 124 PILDSALAGGISTGYLTEVTGESGAGKTQFLLHLLLSVQLPAPH-GLSKNALYISTESDL 182
Query: 85 PMRRLHQL--SHT----FRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
RL QL HT P D +F SV +VD L+ I ++ + SR
Sbjct: 183 ATNRLSQLLNEHTVLQSLHPDIPRPSLDNVF--SVTTVD--LETQEHIINYQVPVAISRF 238
Query: 139 PIRLIVIDSIAALFRSDFD-NTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDL 197
I L+VIDSI A +R++ ++ L +RS+ K+ L+A+AV +A++V NQ+ D
Sbjct: 239 DIGLVVIDSITANYRAESSTESVSGLLERSWQLKKLGHFLRALAVRHSIAIVVANQISDG 298
Query: 198 ME 199
E
Sbjct: 299 FE 300
>gi|383319080|ref|YP_005379921.1| DNA repair and recombination protein RadA [Methanocella conradii
HZ254]
gi|379320450|gb|AFC99402.1| DNA repair and recombination protein RadA [Methanocella conradii
HZ254]
Length = 324
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 97/185 (52%), Gaps = 16/185 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K G +D LGGG+ SITE E GSGKTQ QL ++ QLP GGL+ S + +
Sbjct: 83 KLKTGSSALDELLGGGVETQSITEFYGEFGSGKTQVAHQLAVNVQLPPEEGGLNGSVIMI 142
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDY---IFVQSVHSVDQLLDIMPKIESFIKNSSN 135
TE F R+ Q+ + +D++P D+ I V ++ + + ++ + +
Sbjct: 143 DTENTFRPERIAQMVKGLKNGDDYDPEDFLKNIHVARAYNSNHQILLVESASELAEKLKD 202
Query: 136 SRLPIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLKAMAVGFG----LAVL 189
S P+RLI++DS+ A FRS++ T+ D +++ L + +++ FG A++
Sbjct: 203 SDKPVRLIIVDSLTAHFRSEYVGRGTLADRQQK--LNKHMHDLMR-----FGDINNAAII 255
Query: 190 VTNQV 194
VTNQV
Sbjct: 256 VTNQV 260
>gi|334322399|ref|XP_003340234.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Monodelphis
domestica]
Length = 422
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 116/263 (44%), Gaps = 45/263 (17%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D +GGGIP TE+ G GKTQ C+QL +
Sbjct: 73 GKKYTALELLEQEHTQGFIITFCSALDNIMGGGIPLTKTTEICGAPGVGKTQLCMQLAVD 132
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLS-------HTFRPSN---DHNPC------ 105
Q+P GG++ +++L TE F + R+ L+ H S+ +H
Sbjct: 133 VQIPECFGGVAGEAIFLDTEGSFMVDRVADLATACVQHLHLIAGSHLEEEHQKALENFSL 192
Query: 106 ----DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
+I+ H+ +LL + + F+ S ++LI++D IA FR DF D
Sbjct: 193 ESILSHIYYFRCHNYTELLAQVHLLPDFLLEHSK----VQLIIVDGIAFPFRHDF----D 244
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL R+ L ++ L +MA LAV+ TNQ+ ++ N+ +
Sbjct: 245 DLSLRTRLLNGLAQQLISMANNHKLAVIWTNQMTTKIDKNQSM----------------- 287
Query: 222 ICPALGIAWANCVNSRLFLSRNE 244
+ PALG +W + RL L ++
Sbjct: 288 LVPALGESWGHAATIRLILHWDQ 310
>gi|11498598|ref|NP_069826.1| DNA repair and recombination protein RadA [Archaeoglobus fulgidus
DSM 4304]
gi|3914552|sp|O29269.1|RADA_ARCFU RecName: Full=DNA repair and recombination protein RadA
gi|2649602|gb|AAB90248.1| DNA repair protein RAD51 (radA) [Archaeoglobus fulgidus DSM 4304]
Length = 337
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 135/303 (44%), Gaps = 47/303 (15%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G + +L+ + +K T G +D LGGG+ +ITE E GSGKTQ C QL +
Sbjct: 71 IGGFESGDKVLERRRSVKKITTGSKDLDELLGGGVETQAITEFFGEFGSGKTQICHQLAV 130
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLL 120
+ QLP GGL S + + TE F R+ Q++ + + + I+V ++ + +
Sbjct: 131 NVQLPEDEGGLEGSVIIIDTENTFRPERIIQMAEA-KGLDGNEVLKNIYVAQAYNSNHQM 189
Query: 121 DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLK 178
++ + + P+RLI++DS+ + FR+++ T+ D +++ L + ++K
Sbjct: 190 LLVDNAKELAEKLKKEGRPVRLIIVDSLMSHFRAEYVGRGTLADRQQK--LNRHLHDLMK 247
Query: 179 AMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRL 238
+ + A++VTNQV + P+ L+ G P P G A+ R+
Sbjct: 248 FGEL-YNAAIVVTNQV--MARPD------------VLF--GDPTKPVGGHIVAHTATFRI 290
Query: 239 FLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
+L + +D + R ++ +PHL + F +T G+
Sbjct: 291 YLKKGKDDL-------------------------RIARLIDSPHLPEGEAIFRVTERGIE 325
Query: 299 GVE 301
E
Sbjct: 326 DAE 328
>gi|34809805|pdb|1PZN|A Chain A, Rad51 (Rada)
gi|34809806|pdb|1PZN|B Chain B, Rad51 (Rada)
gi|34809807|pdb|1PZN|C Chain C, Rad51 (Rada)
gi|34809808|pdb|1PZN|D Chain D, Rad51 (Rada)
gi|34809809|pdb|1PZN|E Chain E, Rad51 (Rada)
gi|34809810|pdb|1PZN|F Chain F, Rad51 (Rada)
gi|34809811|pdb|1PZN|G Chain G, Rad51 (Rada)
Length = 349
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 128/297 (43%), Gaps = 43/297 (14%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G L T + + G +D+ LGGGI +ITE+ E GSGKTQ L +
Sbjct: 94 LGTFXRADEYLKKRATIGRISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAV 153
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLL 120
QLP GGL+ S +++ TE F R+ +++ R + +I+V + +
Sbjct: 154 XVQLPPEEGGLNGSVIWIDTENTFRPERIREIAQN-RGLDPDEVLKHIYVARAFNSNHQX 212
Query: 121 DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAM 180
++ + E IK N+ P++L+++DS+ + FRS++ L +R K L +
Sbjct: 213 LLVQQAEDKIKELLNTDRPVKLLIVDSLTSHFRSEYIG-RGALAERQQKLAKHLADLHRL 271
Query: 181 AVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
A + +AV VTNQV P+ + G P P G A+ R++L
Sbjct: 272 ANLYDIAVFVTNQV--QARPD------------AFF--GDPTRPIGGHILAHSATLRVYL 315
Query: 241 SRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ G GG +R ++ APHL + F IT +G+
Sbjct: 316 RK--------------GKGG-----------KRIARLIDAPHLPEGEAVFSITEKGI 347
>gi|145350889|ref|XP_001419827.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580059|gb|ABO98120.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 351
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 133/297 (44%), Gaps = 40/297 (13%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
TP LD ++ + +D+ LGGG+ ++TE+V +G+GKTQ CL SA P
Sbjct: 66 TPTTALDALRRSQYVPLVIEDVDKALGGGLRVGAVTEVVGAAGAGKTQLCLAACASAAAP 125
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSN-DHNPCDYIFVQSVHSV--DQLLDI 122
+ GG +Y+ E F RL +++ P + + + VH V L D+
Sbjct: 126 ARVGGRDGGVIYVDAERKFSGARLAEIAREKFPGAFEDEESVHALARRVHVVTPTSLTDL 185
Query: 123 MPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAV 182
++++ + + + +RL++IDSIA L R++F + + +R ++ LK A
Sbjct: 186 NKRLDALEEAIIDHK--VRLVIIDSIAHLARAEFGR--EKVVQRQSALGAVASTLKRHAE 241
Query: 183 GFGLAVLVTNQVVDLME--PNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
LAVL NQV + +G G+ SSG I ALG WA+CVN+R+ L
Sbjct: 242 KHALAVLAVNQVTTKIGTFARHASDG---GDDVADESSG--ITAALGTKWAHCVNTRIAL 296
Query: 241 SRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
ED RR+L +V +P TS E+ + G+
Sbjct: 297 EVLED--------------------------RRALKIVKSPLAPLTSFEYRVDASGI 327
>gi|146302794|ref|YP_001190110.1| DNA repair and recombination protein RadA [Metallosphaera sedula
DSM 5348]
gi|226736609|sp|A4YCN4.1|RADA_METS5 RecName: Full=DNA repair and recombination protein RadA
gi|145701044|gb|ABP94186.1| DNA repair and recombination protein RadA [Metallosphaera sedula
DSM 5348]
Length = 324
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 100/180 (55%), Gaps = 6/180 (3%)
Query: 16 TTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASS 75
+ +K T G +D LGGGI ++TEL E GSGKTQ C Q++++ QLP GGLS +
Sbjct: 85 SVKKITTGSQALDGLLGGGIETRTMTELFGEFGSGKTQICHQVSVNVQLPPERGGLSGKA 144
Query: 76 LYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSN 135
LY+ TE F R+ ++ + + ++++++ D + I+ +++ I ++
Sbjct: 145 LYIDTEGTFRTERIKAMASALGLEPKEVLQNIMSIRAINT-DHQIAIVEELQDIIAKDNS 203
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
I+L+V+DSI + FR+++ ++L R + L +A + LAV+VTNQV+
Sbjct: 204 ----IKLVVVDSITSHFRAEYSG-RENLAVRQQKLNRHLHQLVRLAEIYDLAVIVTNQVM 258
>gi|298676052|ref|YP_003727802.1| DNA repair and recombination protein RadA [Methanohalobium
evestigatum Z-7303]
gi|298289040|gb|ADI75006.1| DNA repair and recombination protein RadA [Methanohalobium
evestigatum Z-7303]
Length = 325
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 102/188 (54%), Gaps = 18/188 (9%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K + GC D + GGI SITEL E GSGKTQ QL ++ QLP+ GGL+ S +++
Sbjct: 81 KLSTGCSEFDEMMEGGIDTQSITELYGEFGSGKTQIAHQLAVNVQLPNEQGGLNGSVIFI 140
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDY---IFVQSVH------SVDQLLDIMPKIESF 129
TE F R+ Q+ + +++H+ DY F++++H S Q+L +M
Sbjct: 141 DTENTFRPERIKQM---VQGASEHHNIDYDPEEFLKNIHVARAYNSNHQIL-LMDSAMEL 196
Query: 130 IKNSSNSRLPIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLKAMAVGFGLA 187
+ S N P+RL+++DS+ A FR+++ T+ D +++ K L+ + +
Sbjct: 197 AEESKNWEQPVRLLIVDSLTAHFRAEYIGRGTLADRQQK---LNKHLHALQRFSDLYNAV 253
Query: 188 VLVTNQVV 195
++VTNQV+
Sbjct: 254 IIVTNQVM 261
>gi|313217208|emb|CBY38360.1| unnamed protein product [Oikopleura dioica]
Length = 338
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G DR L GGI SITEL E +GK+Q C+ L ++AQLP GG +LY+
Sbjct: 101 RITTGSKEFDRMLAGGIETGSITELFGEFRTGKSQLCMTLAVTAQLPVDLGGGEGKALYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL +S + S + D + V S D + ++ + + S S
Sbjct: 161 DTEGTFRPERLLAISERYGLSGK-DVLDNVAVARAFSTDHQMTMLHTCAAMMTESRYS-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
++++DSI AL+RSD+ + ++ L + G+LK +A FG+A+++TNQV
Sbjct: 218 ---IMIVDSIMALYRSDYSGRGELAARQMHLGKFLRGLLK-LADTFGVAIVITNQVT--- 270
Query: 199 EPNEGVNGLRVGN 211
V+G+ +G+
Sbjct: 271 ---ANVDGMMMGD 280
>gi|340719388|ref|XP_003398136.1| PREDICTED: DNA repair protein XRCC3-like [Bombus terrestris]
Length = 254
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 108/227 (47%), Gaps = 29/227 (12%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T GCP D L GGI IT++ + +GKTQ LQL L+ QLP + GG +A ++Y+ T
Sbjct: 19 TTGCPKFDTLLQGGITTRGITQIYGAASTGKTQLALQLCLTVQLPITEGGFAAGAVYICT 78
Query: 81 EFPFPMRRLHQLSHTFRPSNDHN-PCDYIFVQSVHSVDQ----LLDIMPKIESFIKNSSN 135
E FP RRL +L + + D +FV+ + ++++ LL +P + S K
Sbjct: 79 ECTFPSRRLQELIQKLEITKKYGINGDSVFVEHISTIEELEICLLHRIPILMSVQK---- 134
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
I LI+IDSIAA +R ++ D+ K+ I L + + V+ NQV
Sbjct: 135 ----IGLIIIDSIAAPYR--VEDWKDESNKKGKSLRTIGQQLHKLCKN-DICVVCINQVT 187
Query: 196 DLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+M N + L V P+LGI W + V + + R
Sbjct: 188 AIMHSNIPNDYLSVR-------------PSLGITWLSMVTNSIQFYR 221
>gi|313214368|emb|CBY42765.1| unnamed protein product [Oikopleura dioica]
gi|313239465|emb|CBY14399.1| unnamed protein product [Oikopleura dioica]
Length = 340
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G DR L GGI SITEL E +GK+Q C+ L ++AQLP GG +LY+
Sbjct: 101 RITTGSKEFDRMLAGGIETGSITELFGEFRTGKSQLCMTLAVTAQLPVDLGGGEGKALYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL +S + S + D + V S D + ++ + + S S
Sbjct: 161 DTEGTFRPERLLAISERYGLSGK-DVLDNVAVARAFSTDHQMTMLHTCAAMMTESRYS-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
++++DSI AL+RSD+ + ++ L + G+LK +A FG+A+++TNQV
Sbjct: 218 ---IMIVDSIMALYRSDYSGRGELAARQMHLGKFLRGLLK-LADTFGVAIVITNQVT--- 270
Query: 199 EPNEGVNGLRVGN 211
V+G+ +G+
Sbjct: 271 ---ANVDGMMMGD 280
>gi|403345476|gb|EJY72106.1| hypothetical protein OXYTRI_06896 [Oxytricha trifallax]
Length = 339
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 112/229 (48%), Gaps = 18/229 (7%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ LGGGI SITE+ E +GKTQ C L ++ QLP S GG ++Y+ T
Sbjct: 103 TTGSSSLDQLLGGGIETGSITEIFGEFRTGKTQICHTLCVTCQLPISKGGGEGMAMYVDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F ++ D + H+ DQ ++ + + + + +R
Sbjct: 163 EGTFRPERLIPVAKRF-GLDEQQVLDNVAYARAHNTDQQNKLLIQAAALM---AENRFA- 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+VIDS AL+R+D+ +L R K L+ +A FG+AV++TNQVV ++
Sbjct: 218 -LLVIDSATALYRTDYSG-RGELSARQMHLAKFLRTLQRIADEFGVAVVITNQVVAQVD- 274
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVR 249
G+ S +PI + IA A+C L RNE V +
Sbjct: 275 ---------GSAMFAADSKKPIGGHI-IAHASCTRLSLRKGRNESRVCK 313
>gi|8307944|gb|AAF74403.1|AF198107_3 DNA repair protein RAD51 [Giardia intestinalis]
Length = 236
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 120/276 (43%), Gaps = 45/276 (16%)
Query: 23 GCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEF 82
GC + LGGG+ SITE+ E +GKTQ C L ++AQLP S GG ++Y+ TE
Sbjct: 2 GCADFNALLGGGVETMSITEVFGEFRTGKTQLCHTLAVTAQLPVSKGGGGGKTVYIDTEG 61
Query: 83 PFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRL 142
F ++ ++ F N D I V V++ +Q ++ + + + + S L
Sbjct: 62 TFRPEKVAPIAERF-GLNPKKALDNIMVARVYTHEQQIECITALPKLMVENQFS-----L 115
Query: 143 IVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNE 202
+++DS+ ALFR DF + ++ L +SG+ K +A F LAV VTNQV+ ++
Sbjct: 116 VIVDSLTALFRVDFTGRGELADRQQKLGQHLSGLAK-LADEFNLAVFVTNQVMAQVD--- 171
Query: 203 GVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSG 262
G + P P G A+ +RL+L +
Sbjct: 172 ----------GAAMFTADPKKPIGGHILAHASTTRLYLRKG------------------- 202
Query: 263 SEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
R R + +P LA+ + I EG+
Sbjct: 203 ------RGDTRVAKIYDSPSLAEGEASYSIAAEGII 232
>gi|304315504|ref|YP_003850651.1| DNA repair and recombination protein RadA [Methanothermobacter
marburgensis str. Marburg]
gi|302588963|gb|ADL59338.1| DNA repair and recombination protein RadA [Methanothermobacter
marburgensis str. Marburg]
Length = 311
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 123/279 (44%), Gaps = 47/279 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D +GGGI +ITE+ E GSGK+Q +L ++ QLP GGL A ++++
Sbjct: 78 RITTGSKALDELIGGGIETQAITEVFGEFGSGKSQLSHELAVTVQLPEERGGLDAEAVFI 137
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q+++ F + ++ +S Q+L + K+ I+ N
Sbjct: 138 DTENTFRPERIEQIANAFELDLEEVLNKIHIARAFNSSHQIL-MAEKVNELIQEGKN--- 193
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
IRL+++DS+ A FR+++ + L R + L+ +A + AV VTNQV
Sbjct: 194 -IRLVIVDSLTAHFRAEYVG-REALATRQQKLNQHLHTLQNIANTYNAAVFVTNQV--QA 249
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
P+ + G P G + RL+L + G+
Sbjct: 250 RPD------------AFF--GSPTKAIGGHVLGHAATYRLWLKK--------------GL 281
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
G +R +V +PHL + C F+IT G+
Sbjct: 282 AG-----------KRIARLVDSPHLPEGECVFKITEAGI 309
>gi|332796456|ref|YP_004457956.1| DNA repair and recombination protein RadA [Acidianus hospitalis W1]
gi|332694191|gb|AEE93658.1| DNA repair and recombination protein RadA [Acidianus hospitalis W1]
Length = 305
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 127/288 (44%), Gaps = 49/288 (17%)
Query: 15 LTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSAS 74
+ K T +D LGGGI ++TE E GSGKTQ C Q++++ QLP GGLS
Sbjct: 65 MNVRKITTSSQALDGLLGGGIETRTMTEFFGEFGSGKTQICHQISVNVQLPPEKGGLSGK 124
Query: 75 SLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFI-KNS 133
++Y+ TE F R+ ++ D + ++++++S D + I ++ FI KN
Sbjct: 125 AVYIDTEGTFRWERIEAMAKAAGLDPDTAMDNIYYMRAINS-DHQIAIGDDLQEFIAKNP 183
Query: 134 SNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQ 193
S ++++++DS+ + FR+++ ++L R K L +A + LAV++TNQ
Sbjct: 184 S-----VKVVIVDSVTSHFRAEYTGR-ENLAARQQKLNKHLHQLTRLAEIYDLAVIITNQ 237
Query: 194 VVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQM 253
V + P+ Y G P G + R+ L ++
Sbjct: 238 V--MARPD------------MFY--GDPTVAVGGHTLYHVPGIRVQLKKS---------- 271
Query: 254 VNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
R +R +V APHL + F IT EG+ E
Sbjct: 272 ---------------RGNKRIARIVDAPHLPEGEIVFAITEEGIRDAE 304
>gi|1378036|gb|AAC44123.1| RadA [Sulfolobus solfataricus]
Length = 324
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 125/287 (43%), Gaps = 47/287 (16%)
Query: 15 LTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSAS 74
+ +K + G +D L GGI ++TE E GSGKTQ C QL+++ QLP GGLS
Sbjct: 84 MNVKKISTGSQALDGLLAGGIETRTMTEFFGEFGSGKTQLCHQLSVNVQLPPEKGGLSGK 143
Query: 75 SLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSS 134
++Y+ TE F R+ ++ D+ + +++++++ D + I+ ++ +
Sbjct: 144 AVYIDTEGTFRWERIENMAKALGLDIDNVMNNIYYIRAINT-DHQIAIVDDLQELVSKDP 202
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+ I+LIV+DS+ + FR+++ + L R K L +A + +AV++TNQV
Sbjct: 203 S----IKLIVVDSVTSHFRAEYPGR-EILAVRQQKLNKHLHQLTRLAEVYDIAVIITNQV 257
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
+ P+ Y G P G + R+ L +
Sbjct: 258 --MARPD------------MFY--GDPTVAVGGHTLYHVPGIRIQLKK------------ 289
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
R RR VV APHL + F +T EG+ E
Sbjct: 290 -------------SRGNRRIARVVDAPHLPEGEVVFALTEEGIRDAE 323
>gi|124360172|gb|ABD33114.2| RecA bacterial DNA recombination protein [Medicago truncatula]
Length = 269
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 116/244 (47%), Gaps = 44/244 (18%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T C +D LGGGI C +TE+ G GKTQ +QL ++ Q+P +GGL ++Y+ T
Sbjct: 12 TTSCLDLDNILGGGINCKEVTEIGGVPGIGKTQIGIQLAVNVQIPLDYGGLGGKAIYIDT 71
Query: 81 EFPFPMRRLHQL-----------SHTFRPSND--------HNPCDYIFVQSVHSVDQLLD 121
E F + R+ Q+ SH F N ++ + IF V S + +
Sbjct: 72 EGSFMVERVLQIAEACIEDLSEYSHHFYKDNQAFGVKMHPNSILENIFYFRVCSYTEQIA 131
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
++ ++ F+ + +++I+IDS+ FR DF DD+ R+ L ++S L +A
Sbjct: 132 LVNYLDKFVTEHKD----VKIIIIDSVTFHFRQDF----DDMALRTRLLGEMSLKLMKLA 183
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F LAV++ NQV + EG L + ALG +W++ +R+ L
Sbjct: 184 KNFSLAVVMLNQVT--TKHIEGSFQLTL---------------ALGDSWSHSCTNRIILY 226
Query: 242 RNED 245
N+D
Sbjct: 227 WNDD 230
>gi|346644687|ref|NP_001231005.1| DNA repair protein RAD51 homolog 3 [Cricetulus griseus]
gi|81901537|sp|Q8R2J9.1|RA51C_CRIGR RecName: Full=DNA repair protein RAD51 homolog 3; Short=R51H3;
AltName: Full=RAD51 homolog C; AltName: Full=RAD51-like
protein 2
gi|19702129|emb|CAC88355.1| RAD51-like protein 2 [Cricetulus griseus]
Length = 366
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 45/259 (17%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGGIP TE+ G GKTQ C+QL +
Sbjct: 73 GKKYTALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVD 132
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRR-----------LHQLSHTFRPSNDH-------- 102
Q+P GG++ ++++ TE F + R LH ++ T +
Sbjct: 133 VQIPECFGGVAGEAVFIDTEGSFMVDRVVTLANACIQHLHLIAGTHKDEEHQKALEGFTL 192
Query: 103 -NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
N +I+ H +LL + + F+ N S ++L++ID IA FR D +D
Sbjct: 193 ENILSHIYYFRCHDYTELLAQVYLLPDFLSNHSK----VQLVIIDGIALPFRHD----LD 244
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL R+ L ++ + ++A LAV++TNQ+ ++ N+ +
Sbjct: 245 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQAL----------------- 287
Query: 222 ICPALGIAWANCVNSRLFL 240
+ PALG +W + RL
Sbjct: 288 LVPALGESWGHAATIRLIF 306
>gi|47933423|gb|AAT39336.1| DNA repair protein RAD51 [Oikopleura dioica]
gi|313216997|emb|CBY38192.1| unnamed protein product [Oikopleura dioica]
gi|313229155|emb|CBY23740.1| unnamed protein product [Oikopleura dioica]
Length = 340
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G DR L GG+ SITEL E +GK+Q C+ L ++AQLP GG +LY+
Sbjct: 101 RITTGSKEFDRMLAGGVETGSITELFGEFRTGKSQLCMTLAVTAQLPVDLGGGEGKALYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL +S + S + D + V S D + ++ + + S S
Sbjct: 161 DTEGTFRPERLLAISERYGLSG-KDVLDNVAVARAFSTDHQMTMLHTCAAMMTESRYS-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
++++DSI AL+RSD+ + ++ L + G+LK +A FG+A+++TNQV
Sbjct: 218 ---IMIVDSIMALYRSDYSGRGELAARQMHLGKFLRGLLK-LADTFGVAIVITNQVT--- 270
Query: 199 EPNEGVNGLRVGN 211
V+G+ +G+
Sbjct: 271 ---ANVDGMMMGD 280
>gi|18376633|emb|CAD21699.1| Rad51C protein [Cricetulus griseus]
Length = 305
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 45/263 (17%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGGIP TE+ G GKTQ C+QL +
Sbjct: 29 GKKYTALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVD 88
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRR-----------LHQLSHTFRPSNDH-------- 102
Q+P GG++ ++++ TE F + R LH ++ T +
Sbjct: 89 VQIPECFGGVAGEAVFIDTEGSFMVDRVVTLANACIQHLHLIAGTHKDEEHQKALEGFTL 148
Query: 103 -NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
N +I+ H +LL + + F+ N S ++L++ID IA FR D +D
Sbjct: 149 ENILSHIYYFRCHDYTELLAQVYLLPDFLSNHSK----VQLVIIDGIALPFRHD----LD 200
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL R+ L ++ + ++A LAV++TNQ+ ++ N+ +
Sbjct: 201 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQAL----------------- 243
Query: 222 ICPALGIAWANCVNSRLFLSRNE 244
+ PALG +W + RL +
Sbjct: 244 LVPALGESWGHAATIRLIFHWEQ 266
>gi|389624165|ref|XP_003709736.1| hypothetical protein MGG_06985 [Magnaporthe oryzae 70-15]
gi|351649265|gb|EHA57124.1| hypothetical protein MGG_06985 [Magnaporthe oryzae 70-15]
gi|440467178|gb|ELQ36416.1| hypothetical protein OOU_Y34scaffold00663g16 [Magnaporthe oryzae
Y34]
gi|440480744|gb|ELQ61393.1| hypothetical protein OOW_P131scaffold01188g4 [Magnaporthe oryzae
P131]
Length = 548
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 98/188 (52%), Gaps = 24/188 (12%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P +D LGGGIP +TE+ ESG+GKTQF L L L+ QLP H GL ++Y+ TE
Sbjct: 142 PELDAALGGGIPTGYVTEITGESGAGKTQFLLSLLLAVQLPPPH-GLGRKAMYIPTEAAL 200
Query: 85 PMRRLHQ--------LSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK--IESFIKNSS 134
RR+ Q LS + RPS D S+ S+ L DI + I SF
Sbjct: 201 STRRVAQMLAANPLLLSASPRPSLD----------SILSLQPLGDIEAQDHILSFQVPLE 250
Query: 135 NSRLPIRLIVIDSIAALFRSDFD---NTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVT 191
+R + LI++DS+AA FR+++D + L RS ++ L+ +A LAV+V
Sbjct: 251 AARRNVGLIILDSVAANFRAEYDAAGSRSTGLAARSAELVRLGMQLRNLARSLNLAVVVA 310
Query: 192 NQVVDLME 199
NQV D E
Sbjct: 311 NQVADRFE 318
>gi|357156164|ref|XP_003577363.1| PREDICTED: DNA repair protein RAD51 homolog B-like [Brachypodium
distachyon]
Length = 340
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 128/283 (45%), Gaps = 45/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITEL E SGKTQ C L ++ QLP GG +LY+
Sbjct: 102 QVTTGSRELDKILEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYI 161
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F N + + + ++ D ++ + S + + +
Sbjct: 162 DAEGTFRPQRLLQIADRF-GLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFA-- 218
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV +
Sbjct: 219 ---LMIVDSATALYRTDFSGR-GELSARQMHMAKFLRSLQKLADEFGVAVVITNQVVAQV 274
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G +G I P G A+ +RL L +
Sbjct: 275 D-------------GSAMFAGPQIKPIGGNIMAHASTTRLALRK---------------- 305
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G G E+ +C+ V+ +P LA+ F+++ EGV V+
Sbjct: 306 -GRG-EERICK-------VISSPCLAEAEARFQLSSEGVADVK 339
>gi|114228441|gb|ABI58231.1| Rad51 protein [Oryza sativa Indica Group]
Length = 332
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 128/283 (45%), Gaps = 46/283 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E SGKTQ C L ++ QLP HGG +LY+
Sbjct: 95 QVTTGSRELDKILDGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDHGGGEGKALYI 154
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +R Q++ F N + + + ++ D ++ S + +R
Sbjct: 155 DAEGTFRPQRFLQIADRF-GLNGADVLENVAYARAYNTDHQSRLLLGAASMM---VETRF 210
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
I +++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 211 AI--MIVDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVITNQVV--- 264
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
V+G ++ G I P G A+ +RLFL +
Sbjct: 265 ---AQVDG------AAMF--GPQIKPIGGNIMAHASTTRLFLRKGR-------------- 299
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+E+ +C+ VV +P LA+ F+I+ EGV V+
Sbjct: 300 ----AEERICK-------VVSSPCLAEAEARFQISPEGVTDVK 331
>gi|297746183|emb|CBI16239.3| unnamed protein product [Vitis vinifera]
Length = 371
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 110/225 (48%), Gaps = 21/225 (9%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGGIP +TELV G GKTQFCL+L+L A LP+S+GGL +Y+ E F
Sbjct: 91 LDEALGGGIPFGVLTELVGPPGIGKTQFCLKLSLLASLPASYGGLDGRVIYIDAESKFSS 150
Query: 87 RRLHQLSHTFRPSNDH------NPCDYIFVQSVHSVDQLLDIMPKIE-SFIKNSSNSRLP 139
RR+ ++ P H C I V S+ + + + I+ S ++N
Sbjct: 151 RRMIEIGSKSFPEIFHVEGMAKEACPLILVLRPTSLSEFTESLQHIKISLLQNH------ 204
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
++L+VIDS+AAL ++D ++ L + IS +K++A + ++VTNQV
Sbjct: 205 VKLLVIDSMAALVTGEYDQ---GPTRQHSLGWHIS-FVKSVAEFSRIPIVVTNQVRSQSH 260
Query: 200 PNEGVNGLRVGNLGCLYSS----GRPICPALGIAWANCVNSRLFL 240
+V + G + ALGI WA+ V RL L
Sbjct: 261 DGTSQYSFQVESRGETVDDHTRFDSHLVAALGIHWAHAVTIRLVL 305
>gi|115488638|ref|NP_001066806.1| Os12g0497300 [Oryza sativa Japonica Group]
gi|18874073|dbj|BAB85492.1| Rad51 [Oryza sativa Japonica Group]
gi|18874075|dbj|BAB85493.1| Rad51 [Oryza sativa Japonica Group]
gi|108862704|gb|ABA98592.2| DNA repair protein RAD51, putative, expressed [Oryza sativa
Japonica Group]
gi|113649313|dbj|BAF29825.1| Os12g0497300 [Oryza sativa Japonica Group]
Length = 341
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 129/283 (45%), Gaps = 46/283 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E SGKTQ C L ++ QLP GG +LY+
Sbjct: 104 QVTTGSRELDKILDGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYI 163
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F N + + + ++ D ++ + S + +R
Sbjct: 164 DAEGTFRPQRLLQIADRF-GLNGADVLENVAYARAYNTDHQSRLLLEAASMM---VETRF 219
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
I +++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 220 AI--MIVDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVITNQVV--- 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
V+G ++ G I P G A+ +RLFL +
Sbjct: 274 ---AQVDG------AAMF--GPQIKPIGGNIMAHASTTRLFLRKGR-------------- 308
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+E+ +C+ VV +P LA+ F+I+ EGV V+
Sbjct: 309 ----AEERICK-------VVSSPCLAEAEARFQISPEGVTDVK 340
>gi|299115518|emb|CBN75722.1| expressed unknown protein [Ectocarpus siliculosus]
Length = 330
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 118/227 (51%), Gaps = 13/227 (5%)
Query: 18 EKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLY 77
++ + GCP +D GG+ +TE+ E+G+GKTQ CLQL L AQL GGL S
Sbjct: 74 DRLSFGCPSLDAAFEGGVRVQGVTEIAGEAGAGKTQLCLQLLLQAQLAPEAGGLGGKSYV 133
Query: 78 LH-TEFPFPMRRLHQLSHTFRPSNDHNP---CDYIFVQSVHSV-DQLLDIMPKIESFIKN 132
L E FP RRL Q++ T++ + P + + +Q+ ++ DQ++ IM + +++
Sbjct: 134 LTCGEGDFPSRRLRQMASTYQSRHGVKPEKLMEGVCIQNAKTLDDQMMIIMEHLPHIMRS 193
Query: 133 SSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTN 192
+ ++L+VIDSIAALFRSD D+ +RS L ++S +K + G A +V N
Sbjct: 194 QN-----VKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLGDRHGAAFVVVN 248
Query: 193 QVV---DLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNS 236
QV G + S G PA+G+ W+ C+N+
Sbjct: 249 QVTARFGSSTIGGGGGRGQGTMGVVGGSGGGGSVPAMGLLWSQCINA 295
>gi|348567412|ref|XP_003469493.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Cavia
porcellus]
Length = 367
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 45/259 (17%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T +LL+ T C +D LGGGIP TE+ G GKTQ C+QL ++ Q+P
Sbjct: 78 TALDLLEQEHTQGFIVTFCSALDDILGGGIPLMKTTEICGAPGVGKTQLCMQLAVTVQIP 137
Query: 66 SSHGGLSASSLYLHTEFPFPMRRL---------H-QLSHTFRPSNDH----------NPC 105
GG++ ++++ TE F + R+ H QL +H N
Sbjct: 138 ECFGGVAGEAVFIDTEGSFMVDRMVDLATACIQHLQLIAGIHMDQEHQKALEDFTLENIL 197
Query: 106 DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKK 165
+I+ H +LL + + F+ + S IRL+++D IA FR DF DDL
Sbjct: 198 SHIYYFRCHDYTELLAQVYLLPDFLSDHSK----IRLVIVDGIAFPFRHDF----DDLSL 249
Query: 166 RSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPA 225
R+ L ++ + ++A LAV++TNQ+ ++ N+ + + PA
Sbjct: 250 RTRLLNGLAQQMISLANHHRLAVILTNQMTTKIDKNQAL-----------------LVPA 292
Query: 226 LGIAWANCVNSRLFLSRNE 244
LG +W + RL ++
Sbjct: 293 LGESWGHAATIRLIFHWDQ 311
>gi|18874071|dbj|BAB85491.1| Rad51 [Oryza sativa Japonica Group]
gi|218186098|gb|EEC68525.1| hypothetical protein OsI_36814 [Oryza sativa Indica Group]
Length = 339
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E SGKTQ C L ++ QLP GG +LY+
Sbjct: 101 QVTTGSRELDKILDGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F N + + + ++ D ++ + S + + +
Sbjct: 161 DAEGTFRPQRLLQIADRF-GLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV +
Sbjct: 218 ---LMIVDSATALYRTDFSGR-GELSARQMHMAKFLRSLQKLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G +G I P G A+ +RL L +
Sbjct: 274 D-------------GSAMFAGPQIKPIGGNIMAHASTTRLALRK---------------- 304
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G G E+ +C+ V+ +P LA+ F+I EGV V+
Sbjct: 305 -GRG-EERICK-------VISSPCLAEAEARFQIASEGVADVK 338
>gi|242775222|ref|XP_002478600.1| DNA repair protein (Rad57), putative [Talaromyces stipitatus ATCC
10500]
gi|218722219|gb|EED21637.1| DNA repair protein (Rad57), putative [Talaromyces stipitatus ATCC
10500]
Length = 532
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 100/176 (56%), Gaps = 11/176 (6%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGGI +TE+ ESGSGKTQF L L L+AQLPS GL ++Y+ TE P
Sbjct: 112 LDELLGGGIATGYLTEITGESGSGKTQFLLNLLLTAQLPSPK-GLGRKAIYISTEAPLST 170
Query: 87 RRLHQL--SHTF---RPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIR 141
RL Q+ SH + P+N+ + S+ ++D L+ I ++ + SR +
Sbjct: 171 PRLSQILQSHPYLSKLPANETPSLANVL--SITAID--LETQDHILNYQLPVAISRYNVG 226
Query: 142 LIVIDSIAALFRSDF-DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
L+VIDSIAA +R++ N+M L RS K+ ML+ +AV +A++V NQV D
Sbjct: 227 LVVIDSIAANYRAEHASNSMQGLSARSGELAKLGHMLRNLAVREDVAIVVANQVSD 282
>gi|115486271|ref|NP_001068279.1| Os11g0615800 [Oryza sativa Japonica Group]
gi|18874069|dbj|BAB85490.1| Rad51 [Oryza sativa Japonica Group]
gi|77551901|gb|ABA94698.1| DNA repair protein RAD51, putative, expressed [Oryza sativa
Japonica Group]
gi|113645501|dbj|BAF28642.1| Os11g0615800 [Oryza sativa Japonica Group]
gi|218193367|gb|EEC75794.1| hypothetical protein OsI_12723 [Oryza sativa Indica Group]
gi|222616333|gb|EEE52465.1| hypothetical protein OsJ_34631 [Oryza sativa Japonica Group]
Length = 339
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E SGKTQ C L ++ QLP GG +LY+
Sbjct: 101 QVTTGSRELDKILDGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F N + + + ++ D ++ + S + + +
Sbjct: 161 DAEGTFRPQRLLQIADRF-GLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV +
Sbjct: 218 ---LMIVDSATALYRTDFSGR-GELSARQMHMAKFLRSLQKLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G +G I P G A+ +RL L +
Sbjct: 274 D-------------GSAMFAGPQIKPIGGNIMAHASTTRLALRK---------------- 304
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G G E+ +C+ V+ +P LA+ F+I EGV V+
Sbjct: 305 -GRG-EERICK-------VISSPCLAEAEARFQIASEGVADVK 338
>gi|310752305|gb|ADP09466.1| RadA [uncultured marine crenarchaeote E48-1C]
Length = 334
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 119/248 (47%), Gaps = 23/248 (9%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G ++D+ LGGG+ +I+E + GSGK+Q C QL ++ QLP+ GGL ++LY+
Sbjct: 89 RLTTGSKVLDQLLGGGLETQTISEFYGQYGSGKSQICHQLCVNVQLPTEQGGLDGAALYV 148
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q+S + + I+ ++ S Q+ ++ + +K ++
Sbjct: 149 DTENTFRTERIVQMSRHLGLEPEQTAKNIIYAEAYTSDHQMF-LLDNADEVVKENN---- 203
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
++LIV+DS+ + FRS++ + L R K L +A F +VTNQV +
Sbjct: 204 -VKLIVVDSLTSHFRSEYIG-REMLAPRQQKLNKHMHKLIRLARAFNTVAVVTNQV--MS 259
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+P+ + G + P G A+ ++R +L R VR ++V+
Sbjct: 260 KPD------------VFFGDG--VYPIGGHVVAHTSHTRTYLRRASRGPVRIARLVSSPY 305
Query: 259 GGSGSEDF 266
G E F
Sbjct: 306 LPEGEEIF 313
>gi|194900751|ref|XP_001979919.1| GG16853 [Drosophila erecta]
gi|190651622|gb|EDV48877.1| GG16853 [Drosophila erecta]
Length = 341
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 130/283 (45%), Gaps = 50/283 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGG+ ITEL +G GKTQ LQL L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGVVARGITELCGAAGVGKTQLLLQLCLCVQLPRELGGLGKGVAYI 146
Query: 79 HTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL Q+S P + N IFV++ + LL ++ +I ++
Sbjct: 147 CTESAFPARRLLQMSKACEKRHPQMELNFLGNIFVENHIEAETLLACVLNRIPRLMQQHG 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR D +R+ +++ L + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYTDYLERARHMRRLADALLSYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
G+ P LG+ WA+ +RL +SR V ++++M
Sbjct: 257 AS--------------------RDGQDEIPCLGLQWAHLGRTRLRVSR----VPKQHRMG 292
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ + T R L ++++P + EF IT EGV
Sbjct: 293 DQLI------------TVRKLEILYSPETPNDFAEFLITAEGV 323
>gi|312090474|ref|XP_003146628.1| rad51 [Loa loa]
gi|307758208|gb|EFO17442.1| DNA repair protein RAD51 [Loa loa]
Length = 360
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 106/224 (47%), Gaps = 19/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ G +DR LGGG+ SITE+ E +GK+Q C L + QLP GG L++
Sbjct: 121 QIATGSRELDRLLGGGVETGSITEIFGEFRTGKSQLCHTLAVMCQLPVDMGGAEGKCLWI 180
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S+ + D + H+ D + ++ + + + S +
Sbjct: 181 DTEGTFRPERLLAIAERHKLSS-QDVLDNVVYARCHNTDHQMQLLIQGSAMMAESRYA-- 237
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+V+DS ALFR+D+ +L R + K ML ++ FG+AV++TNQVV
Sbjct: 238 ---LLVVDSATALFRTDYSGR-GELASRQTMLAKYLRMLLKLSDEFGVAVVITNQVVS-- 291
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
V+G GC G P G A+ +RL+L +
Sbjct: 292 ----QVDG------GCGMFQGETKKPIGGNIMAHASTTRLYLRK 325
>gi|149051555|gb|EDM03728.1| similar to RAD51-like 1 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 319
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 99/173 (57%), Gaps = 6/173 (3%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+PC S+TE+ G GKTQFC+ +++ A LP+ GGL + LY+ TE F
Sbjct: 90 LDEALHGGVPCGSLTEVTGPPGCGKTQFCIMMSVLATLPTRLGGLEGAVLYIDTESAFTA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L ++ ++ES + + ++L+
Sbjct: 150 ERLVEIAESRFPQYFNTEEKLLLTSSRVHLCQELTCEGLLQRLESLEEEIISKG--VKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
++DSIA++ R +FD + ++K+R+ K + +LK ++ F + V++TNQ+
Sbjct: 208 IVDSIASVVRKEFDPQLQGNIKERNKFLGKGASLLKYLSGEFSVPVILTNQIT 260
>gi|195501628|ref|XP_002097874.1| GE24233 [Drosophila yakuba]
gi|194183975|gb|EDW97586.1| GE24233 [Drosophila yakuba]
gi|209946338|gb|ACI97400.1| spindle B [Drosophila yakuba]
Length = 341
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 130/286 (45%), Gaps = 50/286 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGG+ ITEL +G GKTQ LQL L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGVVARGITELCGAAGVGKTQLLLQLCLCVQLPRELGGLDKGVAYI 146
Query: 79 HTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL Q+S P N IFV++ + LL ++ +I ++
Sbjct: 147 CTESAFPARRLLQMSKACERRHPQMQLNFLGNIFVENHVEAETLLACVINRIPRLMQQHG 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR D +R+ +++ L + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYTDYLERARHMRRLADALLSYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
G+ P LG+ WA+ +RL +SR V ++++M
Sbjct: 257 TS--------------------RDGQDEIPCLGLQWAHLGRTRLRVSR----VPKQHRMG 292
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
+ + T R L ++++P + EF IT EGV V
Sbjct: 293 DQLI------------TVRKLEILYSPETPNDFAEFLITAEGVVNV 326
>gi|50556100|ref|XP_505458.1| YALI0F15477p [Yarrowia lipolytica]
gi|49651328|emb|CAG78267.1| YALI0F15477p [Yarrowia lipolytica CLIB122]
Length = 329
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 89/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI +ITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 92 TTGSSQLDTLLGGGIETGAITEMFGEFRTGKSQLCHTLAVTCQLPIDQGGGEGKCLYIDT 151
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RLHQ++ + + D D + H+ D + ++ + + S S
Sbjct: 152 EGTFRPERLHQIARRYGLNGD-EVLDNVAYARAHNSDHQMQLLQMAANMMTKSRFS---- 206
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+++DSI AL+R+D+ +L R K L+ +A FG+AV++TNQVV
Sbjct: 207 -CLIVDSIMALYRTDYAG-RGELSARQTHVAKFMRTLQRLADEFGIAVVITNQVV 259
>gi|145352283|ref|XP_001420481.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580715|gb|ABO98774.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 358
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGG +ITE+ E GKTQ C + ++ Q+P GG A ++ T
Sbjct: 123 TSGAAAVDAILGGGFESRAITEIYGEWRCGKTQLCHTIAVTTQMPVEMGGGCAKVAWIDT 182
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL Q+++ F D + + V V +VDQ++ + I + + P
Sbjct: 183 ENTFRGDRLVQIANRFGLDADAVLSN-VMVARVDTVDQMMHALIAI-----GAKMAEEPF 236
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
+L+V+DSI A+FR D+ +L +R + L+ +A F +AV++TNQV +
Sbjct: 237 KLLVVDSIMAIFRVDY-VARGELSERQQTLNQFLSRLRKIAEEFNVAVVLTNQV----QS 291
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGG 260
+ G G ++ P G A+ RL + +
Sbjct: 292 DPG---------GMAFAGVEPKKAIGGHVLAHASTIRLMVRKG----------------- 325
Query: 261 SGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
R R L V+ P L + EF+IT GV G+E
Sbjct: 326 --------RAEARVLKVLQGPTLKEDEAEFQITEGGVTGME 358
>gi|408388465|gb|EKJ68149.1| hypothetical protein FPSE_11616 [Fusarium pseudograminearum CS3096]
Length = 445
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 143/348 (41%), Gaps = 78/348 (22%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGG+P ++TE ESG+GKTQ L L L+ QLPS H GL +LY+ TE
Sbjct: 96 LDAILGGGVPVGAVTEFTGESGAGKTQALLSLCLAVQLPSPH-GLGREALYISTEATMAT 154
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQSVHS-VDQLLDIMPKIESFIKNSSNSRLPIRLIVI 145
RL Q+ + ++ D + ++HS + L+ I F SR I LI++
Sbjct: 155 SRLAQMLKSNPIIQQYDVDDRPSLDAIHSTITPDLETQDHILDFQVPVLLSRHRIGLIIL 214
Query: 146 DSIAALFRSDFDNT---MDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNE 202
DS+AA +R++F+ ++ RS ++ +L+ +A +AV+V NQV D +
Sbjct: 215 DSVAANYRAEFERQGTHGSNMAARSAELVRLGALLRDLARRHNIAVVVANQVADRFSSSS 274
Query: 203 GVNGLRVGNLGCLYSS--------------------------------GRPICPAL---- 226
+ + + G ++ S G P PAL
Sbjct: 275 TLRHVPPRSSGPVHESPLASRSMPPPSSINLPSSTPSSSLPFALQDPDGPPPLPALMLDH 334
Query: 227 -----------------------GIAWANCVNSRLFLSRNEDF-VVRENQMVNGGVGGSG 262
G+ W+ + R+ L + + +R+ G +
Sbjct: 335 QQRWFTGWGDDPHASYSLKTPSLGLVWSTQIACRVALFKRPVYGRIRQ----AGPITAED 390
Query: 263 SEDFVC---RRTRRSLHVVFAPHLADT------SCEFEITREGVFGVE 301
D R RR + VVFAPH T + EFE+T G+ V+
Sbjct: 391 DSDLAAPTLRGWRRWMKVVFAPHTPSTGQGLHGAAEFEVTMGGLKSVQ 438
>gi|320166280|gb|EFW43179.1| RAD51L1 [Capsaspora owczarzaki ATCC 30864]
Length = 358
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 54/229 (23%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG ++ITELV SG GKTQFC+ L + A LP HGGL +Y+ TE F
Sbjct: 91 LDAALRGGFAFSTITELVGPSGCGKTQFCMMLAVQASLPLEHGGLGGGVVYIDTESAFSA 150
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVID 146
RL L DQ + +E K L+++D
Sbjct: 151 TRLDTL------------------------DQAI-----VERGAK----------LVILD 171
Query: 147 SIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNG 206
S+A+L R ++D+ + +R+ ++ +LK +A F + ++VTNQV + +G
Sbjct: 172 SVASLVRKEYDS--KSMVQRTAYLSNVASVLKYLAESFSIPIVVTNQVTTSVSMRASFDG 229
Query: 207 LRVGNLGCLYSSGRP----------ICPALGIAWANCVNSRLFLSRNED 245
N G S+ R + ALG W++CVN+RL + D
Sbjct: 230 ---NNYGGASSAQRETDGVENVEAQVTAALGNTWSHCVNTRLVVEYVTD 275
>gi|170044836|ref|XP_001850037.1| DNA-repair protein XRCC3 [Culex quinquefasciatus]
gi|167867962|gb|EDS31345.1| DNA-repair protein XRCC3 [Culex quinquefasciatus]
Length = 281
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 134/311 (43%), Gaps = 70/311 (22%)
Query: 8 QNLLDNPLTTEKCTVGCPIIDRCL-GGGIPCNSITELVAESGSGKTQFCLQLTLS--AQL 64
Q L +P K +DR L GGI + E+ ++GSGKTQ L L L+ Q
Sbjct: 18 QALTAHPNRWRKLRFNVASLDRLLCAGGISARGVVEIAGDAGSGKTQLALHLALTCQQQC 77
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSN--DHNPCDY---IFVQSVHSVDQL 119
P G +Y+ TE PFP +RL Q+ T R S+ H Y IFV+ +++
Sbjct: 78 PERRG-----VVYISTEHPFPSKRLVQMEQTLRNSSGVGHEVGKYSDNIFVEHLNN-PVG 131
Query: 120 LDIMPKIESFIKNSS-----NSRL-------PIRLIVIDSIAALFRSDFDNTMDDLKKRS 167
LD++ + I NS+ RL PIRL+VIDSIAA++ + +D +R+
Sbjct: 132 LDLIYFEDVLINNSALEQCITDRLPVLLENNPIRLLVIDSIAAVYADE-----EDYVERA 186
Query: 168 FLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALG 227
F ++ L A+ F + TNQV +++ Y + PALG
Sbjct: 187 ESFRRLVHSLHALQERFDFVTVCTNQVRAVVDD---------------YDGEEKVIPALG 231
Query: 228 IAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTS 287
+AW + V++R+ L R + G+ RR ++F P
Sbjct: 232 LAWGSLVHTRIQLRR---------------IMGT---------NRRVCQLLFCPTAEPAE 267
Query: 288 CEFEITREGVF 298
C F I + G+
Sbjct: 268 CYFVIAQAGIL 278
>gi|357479303|ref|XP_003609937.1| DNA repair protein RAD51-like protein [Medicago truncatula]
gi|355510992|gb|AES92134.1| DNA repair protein RAD51-like protein [Medicago truncatula]
Length = 341
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITEL E SGKTQ C L ++ QLP GG ++Y+
Sbjct: 103 QITTGSRELDKILEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYI 162
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F N + + + ++ D ++ + S + + +
Sbjct: 163 DAEGTFRPQRLLQIADRF-GLNGPDVLENVAYARAYNTDHQSRLLLEAASMMVETRFA-- 219
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L++IDS AL+R+DF +L R K L+ +A FG+AV++TNQVV +
Sbjct: 220 ---LMIIDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVLTNQVVSQV 275
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G +G I P G A+ +RL L +
Sbjct: 276 D-------------GSAMFAGPQIKPIGGNIMAHATTTRLALRK---------------- 306
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G G E+ +C+ V+ +P LA+ F+I EGV V+
Sbjct: 307 -GRG-EERICK-------VISSPCLAEAEARFQILGEGVSDVK 340
>gi|242069171|ref|XP_002449862.1| hypothetical protein SORBIDRAFT_05g024565 [Sorghum bicolor]
gi|241935705|gb|EES08850.1| hypothetical protein SORBIDRAFT_05g024565 [Sorghum bicolor]
Length = 340
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E SGKTQ C L ++ QLP GG ++Y+
Sbjct: 99 QVTTGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYI 158
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F N + + + ++ D ++ + S + + +
Sbjct: 159 DAEGTFRPQRLLQIADRF-GLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFA-- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+V+DS AL+R+DF +L R K L+ +A FG+AV++TNQVV +
Sbjct: 216 ---LMVVDSATALYRTDFSGR-GELSARQMHMAKFLRSLQKLADEFGVAVVITNQVVAQV 271
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G +G I P G A+ +RL L +
Sbjct: 272 D-------------GSAMFAGPQIKPIGGNIMAHASTTRLALRK---------------- 302
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G G E+ +C+ V+ +P LA+ F+I EGV V+
Sbjct: 303 -GRG-EERICK-------VISSPCLAEAEARFQIASEGVADVK 336
>gi|400597535|gb|EJP65265.1| DNA repair protein RAD57 [Beauveria bassiana ARSEF 2860]
Length = 495
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 6 TPQNLLDNPLTTEKCTVGC-----PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+P+ LD P+ C +D LGGG+P ITE ESG+GKTQF L L L
Sbjct: 103 SPETRLDAPVRAGPAQTPCISTLDDTLDEALGGGVPVGYITEFAGESGAGKTQFLLSLCL 162
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQL---SHTFR---PSNDHNPCDYIF---VQ 111
+ QLP+ GL +LY+ TE RRL Q+ S R + D D I
Sbjct: 163 AVQLPAPR-GLGRQALYVSTEAALATRRLSQILAGSDALRNLDAAVDRPSLDNILSTVTP 221
Query: 112 SVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDL----KKRS 167
+ S D +L+ ++ + +R I L+VIDS+AA +R++F++ L RS
Sbjct: 222 DLESQDHILEY--QVPVLL-----ARHDIGLLVIDSVAANYRAEFESRGSSLGSSMAARS 274
Query: 168 FLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPN 201
++ L+ +A G+AV+V NQV D N
Sbjct: 275 AQLVRLGAHLRDLARRHGIAVVVANQVADRFASN 308
>gi|301098091|ref|XP_002898139.1| DNA repair protein RAD51 [Phytophthora infestans T30-4]
gi|262105500|gb|EEY63552.1| DNA repair protein RAD51 [Phytophthora infestans T30-4]
Length = 338
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 118/246 (47%), Gaps = 23/246 (9%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T ++L++ + G +D L GGI SITE+ E +GKTQ C QL ++ QLP
Sbjct: 88 TAADVLESRKDLITLSTGSNAVDELLKGGIETGSITEMFGEFRTGKTQLCHQLCVTCQLP 147
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GG +LY+ TE F +RL ++ + D + F ++ +S Q + ++ +
Sbjct: 148 VDRGGGEGKALYIDTEGTFRPQRLQAIAERYGLDGDSVLDNVAFARAYNSEHQ-MQLLIQ 206
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ + + SR L+++DS ALFR+D+ +L R K L MA FG
Sbjct: 207 ASAMM---AESRFA--LVIVDSATALFRTDYSGR-GELAARQQELAKFLRALTRMADEFG 260
Query: 186 LAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALG--IAWANCVNSRLFLSRN 243
+AV++TNQ+ P+ G+ + P+ P G +A A+C RL R
Sbjct: 261 VAVVITNQMT--ANPDSGM------------FAKDPLQPIGGNIMAHASCTRLRLKKGRG 306
Query: 244 EDFVVR 249
E+ V++
Sbjct: 307 ENRVMK 312
>gi|449274710|gb|EMC83788.1| DNA repair protein RAD51 like protein 2, partial [Columba livia]
Length = 253
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 96/166 (57%), Gaps = 6/166 (3%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D+ L GG+PC S+TE+ + G GKTQFC+ +++ A LP S GGL+ + +Y+ TE F
Sbjct: 90 LDKVLHGGVPCGSLTEITSPPGCGKTQFCIMMSVLATLPLSMGGLNGAVIYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSN-DHNPCDYIFVQSVHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ P+ D + + +SVH L ++ +I S + + + ++LI
Sbjct: 150 ERLIEIAGNRLPTYFDSDEKLFCMTRSVHVYRDLTCGSVLKRIMSLEEEIISKK--VKLI 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAV 188
+IDS+A++ R +FD + +L +RS + + MLK +A F + V
Sbjct: 208 IIDSVASVVRKEFDTKLQGNLAERSNFLARGASMLKYLAEEFSIPV 253
>gi|405959794|gb|EKC25786.1| Leucine-zipper-like transcriptional regulator 1 [Crassostrea gigas]
Length = 1621
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 107/234 (45%), Gaps = 49/234 (20%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGG+P ITE G GKTQ C+Q+ + Q+PS GGL ++Y+ TE F +
Sbjct: 799 LDNMLGGGVPLCKITEFCGAPGVGKTQMCMQIAVDVQIPSQFGGLQGEAVYIDTEGSFIV 858
Query: 87 RRLHQLSHTFRPSNDHNPCD-----------YIFVQSV---------HSVDQLLDIMPKI 126
RL ++ + + DH C+ I V+SV H +LL + +
Sbjct: 859 ERLVDIA---KATVDH--CNEMARLEGFKEGEITVESVLSGVHFYRCHDYVELLATVHLL 913
Query: 127 ESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGL 186
FIK I+++++DS+A FR DF DDL R+ L ++ +A F +
Sbjct: 914 PEFIKKHPK----IKVVLVDSVAFHFRHDF----DDLSLRTRLLTTMAQSFIKLATEFKI 965
Query: 187 AVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
A+++TNQ+ P E + PALG +W + R+ L
Sbjct: 966 AIVLTNQMTTKFSPGEDSR----------------LVPALGESWGHASTIRVIL 1003
>gi|322710724|gb|EFZ02298.1| DNA repair protein (Rad57), putative [Metarhizium anisopliae ARSEF
23]
Length = 402
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 101/194 (52%), Gaps = 22/194 (11%)
Query: 13 NPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLS 72
NP + + CP ID L GIP +SITE+ ESG+GKTQF L L L+ QLP H GL
Sbjct: 111 NPSSPSFISTLCPQIDAALNSGIPTSSITEITGESGAGKTQFLLSLCLAVQLPPPH-GLR 169
Query: 73 ASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPC--DYIFVQSVHSVDQLLD-IMPKIES- 128
+LY+ TE +RL Q+ + NP D F S+D +L + P +ES
Sbjct: 170 KQALYISTESSLATKRLSQILAS-------NPLLQDIDFADRP-SLDNILSTVTPDLESQ 221
Query: 129 -----FIKNSSNSRLPIRLIVIDSIAALFRSDFDNT----MDDLKKRSFLFFKISGMLKA 179
+ SR I L+VIDS+AA +R++F+ ++ RS ++ +L+
Sbjct: 222 DHILEYQVPVLLSRHNIGLLVIDSVAANYRAEFERAGSSYGSNMAARSAELVRLGALLRD 281
Query: 180 MAVGFGLAVLVTNQ 193
+A G+AV+V NQ
Sbjct: 282 LARRHGIAVVVANQ 295
>gi|149635547|ref|XP_001509367.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Ornithorhynchus
anatinus]
Length = 364
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 45/259 (17%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGGIP TE+ G GKTQ C+QL +
Sbjct: 73 GNKYTALELLEQEHTQGFIITFCSALDNILGGGIPLTKTTEICGGPGVGKTQLCIQLAVD 132
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDH-------------- 102
Q+P GG++ ++++ TE F + R+ ++ H + H
Sbjct: 133 VQIPECFGGVAGEAVFIDTEGSFLVDRVEAIATACIQHLQLVAESHLEEEQQKALENFSL 192
Query: 103 -NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
+ +I+ H +LL + + F+ S +RL+V+D IA FR DF D
Sbjct: 193 ESILAHIYYFRCHDYTELLAQIYLLSDFLSEHSK----VRLVVVDGIAFPFRHDF----D 244
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL R+ L ++ L ++A LAV++TNQ+ ++ N+ +
Sbjct: 245 DLSLRTRLLNGLAQQLISLANDHKLAVILTNQMTTKIDQNQSI----------------- 287
Query: 222 ICPALGIAWANCVNSRLFL 240
+ PALG +W + R+ L
Sbjct: 288 LVPALGDSWGHAATIRIIL 306
>gi|304367643|gb|ADM26629.1| DNA repair protein rad51 [Polypedilum vanderplanki]
Length = 347
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 92/175 (52%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ LGGGI SITE+ E SGKTQ L ++ QLP++ GG LY+ T
Sbjct: 108 TTGSRELDKLLGGGIETGSITEVFGEFRSGKTQLAHTLAVTCQLPANSGGGQGKCLYIDT 167
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F+ + + D I V ++ D L ++ + + +++R
Sbjct: 168 EGTFRPERLSSIAERFK-MDPNEVLDNIAVARAYNTDHQLTLLVHASAIM---ADTRFA- 222
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS AL+R+D+ +L R K L MA FG+AVL+TNQVV
Sbjct: 223 -LLVVDSATALYRTDYSG-RGELAARQMHLAKFMRHLLRMADEFGIAVLITNQVV 275
>gi|357477597|ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medicago truncatula]
gi|357477663|ref|XP_003609117.1| DNA repair protein RAD51-like protein [Medicago truncatula]
gi|355510139|gb|AES91281.1| DNA repair protein RAD51-like protein [Medicago truncatula]
gi|355510172|gb|AES91314.1| DNA repair protein RAD51-like protein [Medicago truncatula]
Length = 347
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 120/259 (46%), Gaps = 44/259 (16%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T ++L+ + T C +D LGGGI C +TE+ G GKTQ +QL ++ Q+P
Sbjct: 75 TAWDMLNEERFSSLITTSCLDLDNILGGGINCKEVTEIGGVPGIGKTQIGIQLAVNVQIP 134
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQL-----------SHTFRPSND--------HNPCD 106
+GGL ++Y+ TE F + R+ Q+ SH F N ++ +
Sbjct: 135 LDYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDMSEYSHHFHKDNQAFGVKMHPNSILE 194
Query: 107 YIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKR 166
IF V S + + ++ ++ F+ + +++I+IDS+ FR DF DD+ R
Sbjct: 195 NIFYFRVCSYTEQIALVNYLDKFVTEHKD----VKIIIIDSVTFHFRQDF----DDMALR 246
Query: 167 SFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPAL 226
+ L ++S L +A LAV++ NQV + EG L + AL
Sbjct: 247 TRLLGEMSLKLMKLAKNLSLAVVMLNQVT--TKHIEGSFQLTL---------------AL 289
Query: 227 GIAWANCVNSRLFLSRNED 245
G +W++ +R+ L N D
Sbjct: 290 GDSWSHSCTNRIILYWNGD 308
>gi|452822335|gb|EME29355.1| DNA-repair protein XRCC3 [Galdieria sulphuraria]
Length = 334
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 135/286 (47%), Gaps = 41/286 (14%)
Query: 19 KCTVGCPIIDRCLGGGIPCNS--ITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSL 76
+ ++GCP +D L GG+ I E E+G GKTQ LQL++ +QL + GGL + +
Sbjct: 80 RLSLGCPKLDDFLHGGLIAGQGQIFEFCGEAGVGKTQLMLQLSIVSQLKTRDGGLDSRVI 139
Query: 77 YLHTEFPFPMRRLHQLSHTF---RPSNDHNP-CDYIFVQSVHSVDQLLDIMPKIESFIKN 132
Y+ T FP RL QL F P + N I V++V S++QL ++ ++ N
Sbjct: 140 YICTSGRFPSSRLQQLIAAFVQRYPYLEANSVASNIIVETVKSLEQLEVLVDSRLVYLLN 199
Query: 133 SSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTN 192
++++ ++I+IDS+A LFR + +D L+ RS + ++ LK ++ +LVTN
Sbjct: 200 NTDA----KVIIIDSLARLFR---ETGLDALQHRSLVLHRLGIQLKRISYKHETLLLVTN 252
Query: 193 QVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQ 252
++ +P N P LG AW + VN R +L R+
Sbjct: 253 EMTG--QPAGSFNPHNFVQ-----------TPCLGKAWKHNVNHRFYL--------RKVT 291
Query: 253 MVNGGVGGSGSEDFVCRRTRRSLHVVFAPHL-ADTSCEFEITREGV 297
+ N ++ + + R + V F+P + F+I EG+
Sbjct: 292 LWN------AFDETLRHKEWREMEVAFSPEYDSSHKIAFQIRSEGI 331
>gi|15679382|ref|NP_276499.1| DNA repair and recombination protein RadA [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3914551|sp|O27436.1|RADA_METTH RecName: Full=DNA repair and recombination protein RadA
gi|2622493|gb|AAB85860.1| DNA repair protein RadA [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 311
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 123/279 (44%), Gaps = 47/279 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D +GGGI +ITE+ E GSGK+Q +L ++ QLP GGL A ++++
Sbjct: 78 RITTGSKALDELIGGGIETQAITEVFGEFGSGKSQLSHELAVTVQLPEERGGLDAEAVFI 137
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q+++ F + ++ +S Q+L + K+ I+ N
Sbjct: 138 DTENTFRPERIEQIANAFELDLEEVLNKIHIARAFNSSHQIL-MAEKVNELIQEGKN--- 193
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
IRL+++DS+ A FR+++ + L R + L+ +A + AV VTNQV
Sbjct: 194 -IRLVIVDSLTAHFRAEYVG-REALATRQQKLNQHLHTLQNIANTYNAAVFVTNQV--QA 249
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
P+ + G P G + R++L + G+
Sbjct: 250 RPD------------AFF--GSPTKAIGGHVLGHAATYRIWLKK--------------GL 281
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
G +R +V +PHL + C F+IT G+
Sbjct: 282 AG-----------KRIARLVDSPHLPEGECVFKITTAGI 309
>gi|444720807|gb|ELW61576.1| DNA repair protein RAD51 like protein 3 [Tupaia chinensis]
Length = 367
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 111/259 (42%), Gaps = 45/259 (17%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGGIP TE+ G GKTQ C+QL +
Sbjct: 73 GKKCTALELLEQEHTQGFIVTFCSALDNILGGGIPLMKTTEICGVPGVGKTQLCMQLAVD 132
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRR-----------LHQLSHTFRPSNDH-------- 102
Q+P GG++ ++++ TE F + R LH ++ T
Sbjct: 133 VQIPECFGGVAGEAIFIDTEGSFMVDRVVDLATACIQHLHLIAGTHMEEEHQKALEDFTL 192
Query: 103 -NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
N +I+ H +LL + ++ F+ S +RL+++D IA FR D +D
Sbjct: 193 ENILSHIYYFRCHDYTELLAQVYLLQDFLLEHSK----VRLVIVDGIAFPFRHD----LD 244
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL R+ L ++ + ++A LAVL+TNQ+ ++ N+
Sbjct: 245 DLSLRTRLLNGLAQQMISLANSHRLAVLLTNQMTTKIDKNQA-----------------S 287
Query: 222 ICPALGIAWANCVNSRLFL 240
+ PALG +W + RL
Sbjct: 288 LVPALGESWGHAATIRLIF 306
>gi|395845975|ref|XP_003795692.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Otolemur garnettii]
Length = 347
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 112/248 (45%), Gaps = 35/248 (14%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGG+P TE+ G GKTQ C+QL +
Sbjct: 73 GKKCTALELLEQEHTQGFIITFCSALDNILGGGVPLMKTTEICGAPGVGKTQLCIQLAVD 132
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPC--DYIFVQSVHSVDQL 119
Q+P GG++ ++++ TE F + R+ ++ C + H +
Sbjct: 133 VQIPECFGGVAGEAIFIDTEGSFMIDRVVDIA---------TACIQHLQLIAETHIGEGS 183
Query: 120 LDIMP--KIESFIKNSSNSRLP-IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGM 176
L P + + SSNS LP +RL+++D IA FR D +DDL R+ L ++
Sbjct: 184 LGAKPICVFQCYDFTSSNSSLPDVRLVIVDGIAFPFRHD----IDDLSLRTRLLNGLAQQ 239
Query: 177 LKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNS 236
+ ++A + LAV++TNQ+ ++ N+ + PALG +W +
Sbjct: 240 MISLANSYKLAVILTNQMTTKIDKNQAF-----------------LVPALGESWGHAATI 282
Query: 237 RLFLSRNE 244
RL ++
Sbjct: 283 RLIFHWDQ 290
>gi|322696544|gb|EFY88335.1| DNA repair protein (Rad57), putative [Metarhizium acridum CQMa 102]
Length = 482
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 98/186 (52%), Gaps = 22/186 (11%)
Query: 24 CPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFP 83
CP ID L GIP +SITE+ ESG+GKTQF L L L+ QLP H GL +LY+ TE
Sbjct: 131 CPQIDAALNSGIPTSSITEITGESGAGKTQFLLSLCLAVQLPPPH-GLGKQALYISTESS 189
Query: 84 FPMRRLHQLSHTFRPSNDHNPC--DYIFVQSVHSVDQLLD-IMPKIES------FIKNSS 134
+RL Q+ + NP D F S+D +L + P +ES +
Sbjct: 190 LATKRLSQILAS-------NPLLQDIDFADRP-SLDNILSAVTPDLESQDHILEYQVPVL 241
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNT----MDDLKKRSFLFFKISGMLKAMAVGFGLAVLV 190
SR I L+VIDS+AA +R++F+ ++ RS ++ +L+ +A +AV+V
Sbjct: 242 LSRHNIGLLVIDSVAANYRAEFERAGSSYGSNMAARSAELVRLGALLRDLARRHDIAVVV 301
Query: 191 TNQVVD 196
NQV D
Sbjct: 302 ANQVSD 307
>gi|209946342|gb|ACI97402.1| spindle B [Drosophila simulans]
Length = 341
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 132/286 (46%), Gaps = 50/286 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGG+ ITEL +G GKTQ LQL L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLCLCVQLPRELGGLGKGVAYI 146
Query: 79 HTEFPFPMRRLHQLS---HTFRPSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL Q+S P + N IFV++ + LL ++ +I ++
Sbjct: 147 CTESSFPARRLLQMSKACEKRHPQMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR +D +R+ +++ L + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
G+ P LG+ WA+ +RL +SR V ++++M
Sbjct: 257 AT--------------------RDGQDEIPCLGLQWAHLGRTRLRVSR----VPKQHRM- 291
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
E + T R L ++++P + EF IT +GV V
Sbjct: 292 --------GEQLI---TVRKLEILYSPETPNDFAEFLITADGVVNV 326
>gi|350590544|ref|XP_003131708.3| PREDICTED: DNA repair protein RAD51 homolog 3 [Sus scrofa]
Length = 315
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 112/263 (42%), Gaps = 45/263 (17%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGG+P ITE+ G GKTQ C+QL +
Sbjct: 73 GKKYTALELLEQEHTQSFIITFCSALDNILGGGVPLTKITEICGAPGVGKTQLCMQLAVD 132
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRR-----------LHQLSHTFRPSND--------- 101
Q+P GG+ ++++ TE F + R LH ++ T
Sbjct: 133 VQIPECFGGVEGEAVFIDTEGSFMVNRVVDLATACIQHLHLIAGTHMEEEQPKALQDFTL 192
Query: 102 HNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
N +I+ +LL + + F+ S +RL+++D IA FR + +D
Sbjct: 193 ENILSHIYYFRCRDYTELLAQVYLLPDFLSEHSK----VRLVIVDGIAFPFRHE----LD 244
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL R+ L ++ + ++A LAV++TNQ+ ++ NE +
Sbjct: 245 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNEAL----------------- 287
Query: 222 ICPALGIAWANCVNSRLFLSRNE 244
+ PALG +W + RL ++
Sbjct: 288 LVPALGESWGHAATIRLIFHWDQ 310
>gi|124485461|ref|YP_001030077.1| DNA repair and recombination protein RadA [Methanocorpusculum
labreanum Z]
gi|226736607|sp|A2SR54.1|RADA_METLZ RecName: Full=DNA repair and recombination protein RadA
gi|124363002|gb|ABN06810.1| DNA repair and recombination protein RadA [Methanocorpusculum
labreanum Z]
Length = 329
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 105/237 (44%), Gaps = 40/237 (16%)
Query: 24 CPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFP 83
P ID GGG+ +ITEL E GSGK+Q QL ++ QLP GGL S LY+ TE
Sbjct: 86 VPEIDELFGGGLETQAITELYGEFGSGKSQIAHQLAVNCQLPQELGGLGGSCLYIDTENT 145
Query: 84 FPMRRLHQLSHTFR----------PSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNS 133
F R+ Q++ P+ D + I V HS D + ++
Sbjct: 146 FRPERIEQMAEGLELADLPEGYVVPTPDEFLAN-IHVARAHSSDHQMLLIDAARELSNEL 204
Query: 134 SNSRLPIRLIVIDSIAALFRSDF------DNTMDDLKKRSFLFFKISGMLKAMAVGFGLA 187
+ S LP++L++IDS+ +LFRS++ L + FK+ L A+A
Sbjct: 205 TASGLPVKLVIIDSLTSLFRSEYAGRGTLAGRQQKLNRHMHDLFKLVDDLNAVA------ 258
Query: 188 VLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
LVTNQV + N G L+ G P P G + R++L +++
Sbjct: 259 -LVTNQV--------------MANPGLLF--GDPTKPIGGNIVGHTATYRVYLRKSK 298
>gi|62738997|pdb|2BKE|A Chain A, Conformational Flexibility Revealed By The Crystal
Structure Of A Crenarchaeal Rada
Length = 324
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 122/284 (42%), Gaps = 47/284 (16%)
Query: 18 EKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLY 77
+K + G +D L GGI + TE E GSGKTQ C QL+++ QLP GGLS ++Y
Sbjct: 87 KKISTGSQALDGLLAGGIETRTXTEFFGEFGSGKTQLCHQLSVNVQLPPEKGGLSGKAVY 146
Query: 78 LHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSR 137
+ TE F R+ + D+ + +++++++ D + I+ ++ + +
Sbjct: 147 IDTEGTFRWERIENXAKALGLDIDNVXNNIYYIRAINT-DHQIAIVDDLQELVSKDPS-- 203
Query: 138 LPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDL 197
I+LIV+DS+ + FR+++ ++L R K L +A + +AV++TNQV
Sbjct: 204 --IKLIVVDSVTSHFRAEYPG-RENLAVRQQKLNKHLHQLTRLAEVYDIAVIITNQVX-- 258
Query: 198 MEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGG 257
P+ Y G P G + R+ L +
Sbjct: 259 ARPD------------XFY--GDPTVAVGGHTLYHVPGIRIQLKK--------------- 289
Query: 258 VGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
R RR VV APHL + F +T EG+ E
Sbjct: 290 ----------SRGNRRIARVVDAPHLPEGEVVFALTEEGIRDAE 323
>gi|336477843|ref|YP_004616984.1| DNA repair and recombination protein RadA [Methanosalsum zhilinae
DSM 4017]
gi|335931224|gb|AEH61765.1| DNA repair and recombination protein RadA [Methanosalsum zhilinae
DSM 4017]
Length = 325
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G T +LD K T GC + LGGG+ SITEL E GSGKTQ QL +
Sbjct: 63 IGGFETGDMVLDRRKLVGKLTTGCTEFNEMLGGGVETQSITELYGEFGSGKTQVAHQLAV 122
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTF--RPSNDHNPCDY---IFVQSVHS 115
+ QLP GGL+ S + + TE F R+ Q+ + D++P ++ I V ++
Sbjct: 123 NVQLPKEKGGLNGSVIMIDTENTFRPERIAQMVDGLSQKHGEDYDPEEFLKHIHVARAYN 182
Query: 116 VDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKI 173
+ + + N+ P+RL ++DS+ A FR+++ T+ D +++ K
Sbjct: 183 SNHQILLSDSASELANELKNTERPVRLFIVDSLTAHFRAEYVGRGTLADRQQK---LNKH 239
Query: 174 SGMLKAMAVGFGLAVLVTNQVV 195
L+ + F AV+VTNQV+
Sbjct: 240 LHDLQRLGDLFNAAVIVTNQVM 261
>gi|432113632|gb|ELK35914.1| DNA repair protein RAD51 like protein 3 [Myotis davidii]
Length = 368
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 45/263 (17%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T +LL+ T C +D LGGG+P TE+ G GKTQ C+QL +
Sbjct: 70 GKTCTALDLLEQEHTQNFIITFCSALDNILGGGVPLTKTTEICGAPGVGKTQLCMQLAVD 129
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLS--------------------HTFRPSND 101
Q+P GG+ ++++ TE F + R+ L+
Sbjct: 130 VQIPECFGGVEGEAVFIDTEGSFMVDRVIDLATACIQHLQLIAGTSMEEAHPKALENFTL 189
Query: 102 HNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
N +I+ H +LL + + F+ S +RL+++D IA FR DFD
Sbjct: 190 ENILSHIYYFRCHDYTELLAQVYLLSEFLSEHSK----VRLVIVDGIAFPFRHDFD---- 241
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL R+ L ++ + ++A LAV++TNQ+ ++ N+ +
Sbjct: 242 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQAM----------------- 284
Query: 222 ICPALGIAWANCVNSRLFLSRNE 244
+ PALG +W + RL ++
Sbjct: 285 LIPALGESWGHAATIRLIFHWDQ 307
>gi|62858301|ref|NP_001016923.1| RAD51 homolog C [Xenopus (Silurana) tropicalis]
gi|58477631|gb|AAH89630.1| MGC107796 protein [Xenopus (Silurana) tropicalis]
gi|89269806|emb|CAJ81518.1| RAD51 homolog C (S. cerevisiae) [Xenopus (Silurana) tropicalis]
Length = 361
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 39/234 (16%)
Query: 24 CPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFP 83
C +D LGGGIP ITE+ G GKTQ C+QL + Q+P GG++ ++++ TE
Sbjct: 90 CSALDEILGGGIPVAKITEICGVPGVGKTQLCMQLAVDVQIPECFGGVAGETVFIDTECS 149
Query: 84 FPMRRLHQLS-----HTFRPSNDHNPCDYIFVQSVHSVDQLL------------DIMPKI 126
F + RL ++ H + H D+I +++++L +++ +I
Sbjct: 150 FRLERLMDIANACVQHCNLIAQGHQDKDHIKAMQTFTLNEILSQIYYFSCHDYIELLAQI 209
Query: 127 ESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGL 186
+ + + +S ++L+VIDSIA FR F +DL R+ L L ++A L
Sbjct: 210 -NLLPDFLSSHPKVKLVVIDSIAFPFRHSF----EDLSLRTRLLNGFGQQLISLAHNCNL 264
Query: 187 AVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
AV++TNQ+ + P++ + PALG +W + RL L
Sbjct: 265 AVVLTNQMTTKIGPSDS-----------------KLVPALGESWGHASTIRLIL 301
>gi|334310651|ref|XP_001378467.2| PREDICTED: DNA repair protein RAD51 homolog 2-like [Monodelphis
domestica]
Length = 268
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 100/169 (59%), Gaps = 8/169 (4%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ SG GKTQFC+ +++ A LP+ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPSGCGKTQFCMMMSVLATLPTGMGGLEGAVIYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS--VHSVDQLL--DIMPKIESFIKNSSNSRLPIRL 142
RL +++ FR + N + + S +H +L +++ +IES + ++R ++L
Sbjct: 150 ERLIRIAE-FRFPSFFNTEEKLLSMSSKIHLYKELTCNEVLKRIESLEEEIISNR--VKL 206
Query: 143 IVIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLV 190
++IDS+A++ R +FD + ++++RS + + +LK +A F + V++
Sbjct: 207 LIIDSVASVVRKEFDTQLQGNMRERSNFLAREASLLKYLAEEFSIIVIM 255
>gi|34849608|gb|AAH58184.1| Rad51l1 protein [Mus musculus]
Length = 248
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 116/218 (53%), Gaps = 27/218 (12%)
Query: 40 ITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPS 99
+TE+ G GKTQFC+ +++ A LP+S GGL + +Y+ TE F RL +++ + P
Sbjct: 1 MTEITGPPGCGKTQFCIMMSVLATLPTSLGGLEGAVVYIDTESAFTAERLVEIAESRFPQ 60
Query: 100 NDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDF 156
+ + S VH +L ++ ++ES + + ++L+++DSIA++ R +F
Sbjct: 61 YFNTEEKLLLTSSRVHLCRELTCEGLLQRLESLEEEIISK--GVKLVIVDSIASVVRKEF 118
Query: 157 DNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV-----------VDLMEPNEGV 204
D + ++K+R+ K + +LK +A F + V++TNQ+ DL+ P + +
Sbjct: 119 DPKLQGNIKERNKFLGKGASLLKYLAGEFSIPVILTNQITTHLSGALPSQADLVSPADDL 178
Query: 205 NGLRVGNLG--CLYSSGRPICPALGIAWANCVNSRLFL 240
+ L G G CL + ALG W +CVN+RL L
Sbjct: 179 S-LSEGTSGSSCLVA-------ALGNTWGHCVNTRLIL 208
>gi|449452620|ref|XP_004144057.1| PREDICTED: DNA repair protein RAD51 homolog [Cucumis sativus]
gi|449518135|ref|XP_004166099.1| PREDICTED: DNA repair protein RAD51 homolog [Cucumis sativus]
Length = 340
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 128/283 (45%), Gaps = 45/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E SGKTQ C L ++ QLP GG ++Y+
Sbjct: 102 QLTSGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYI 161
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F N + + + ++ D ++ + S + + +
Sbjct: 162 DAEGTFRPQRLLQIADRF-GLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFA-- 218
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV +
Sbjct: 219 ---LMIVDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQV 274
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G +G I P G A+ +RL L +
Sbjct: 275 D-------------GSAIFAGPQIKPIGGNIMAHASTTRLALRK---------------- 305
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G G E+ +C+ V+ +P LA+ F+I+ EGV V+
Sbjct: 306 -GRG-EERICK-------VISSPCLAEAEARFQISAEGVTDVK 339
>gi|374633151|ref|ZP_09705518.1| DNA repair and recombination protein RadA [Metallosphaera
yellowstonensis MK1]
gi|373524635|gb|EHP69512.1| DNA repair and recombination protein RadA [Metallosphaera
yellowstonensis MK1]
Length = 324
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 97/180 (53%), Gaps = 6/180 (3%)
Query: 16 TTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASS 75
+ +K T +D LGGGI ++TEL E GSGKTQ C Q++++ QLP GGL+ +
Sbjct: 85 SVKKITTSSQALDGLLGGGIETRTMTELFGEFGSGKTQICHQISVNVQLPPEKGGLAGKA 144
Query: 76 LYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSN 135
LY+ TE F R+ ++ + + ++++++ D + I+ +++ I
Sbjct: 145 LYIDTEGTFRTERIRAMASALGLDPKEALSNIMSIRAINT-DHQIAIVEELQDLIAKDDR 203
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
I+L+V+DS+ + FR+++ ++L R + L +A + LAV+VTNQV+
Sbjct: 204 ----IKLVVVDSVTSHFRAEYSG-RENLAARQQKLNRHLHQLVRLAEIYDLAVVVTNQVM 258
>gi|303272033|ref|XP_003055378.1| Rad51 DNA recombinase 3 [Micromonas pusilla CCMP1545]
gi|226463352|gb|EEH60630.1| Rad51 DNA recombinase 3 [Micromonas pusilla CCMP1545]
Length = 354
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 111/240 (46%), Gaps = 45/240 (18%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGG+ ITEL G GKTQ C+QL S Q+P + GG ++Y+ TE F
Sbjct: 102 LDALLGGGVAAGEITELCGCPGIGKTQMCVQLCASVQIPHAFGGYDGEAVYVDTEGSFMA 161
Query: 87 RRLHQLSHT----FRPSNDHNPCDYIFVQSV-----------------HSVDQLLDIMPK 125
R +++ R ++ +P D ++ H V +LL ++
Sbjct: 162 ERAEEIAEATARHLRSVSNASPEDAGMSDAIASFTAERMLERVHLFRCHEVTELLAVLEA 221
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ +++K +RL+V+DS+A FR DF D+ R+ + K++ L+ +A
Sbjct: 222 LPAYVKKHR-----VRLVVVDSVAFHFRQDF----RDMALRTTILAKMTQRLQQLASENA 272
Query: 186 LAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
LAV+ NQV +P G G + PALG ++A+ +R+ LS +D
Sbjct: 273 LAVVTVNQVTVKPDPRGG---------------GARLVPALGESYAHACTTRIILSWEDD 317
>gi|406603267|emb|CCH45195.1| DNA repair protein [Wickerhamomyces ciferrii]
Length = 352
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 90/175 (51%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 113 TTGSKQLDTLLGGGIETGSITELFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLYIDT 172
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N+ + D + ++ D L ++ + + + S S
Sbjct: 173 EGTFRPVRLVSIARRY-GLNEDDALDNVAYARAYNADHQLQLLNQAAAMMSESRFS---- 227
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DSI AL+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 228 -LLIVDSIMALYRTDFAGR-GELSARQMHVAKYMRTLQRLADEFGIAVVITNQVV 280
>gi|424813601|ref|ZP_18238789.1| DNA repair and recombination protein RadA [Candidatus Nanosalina
sp. J07AB43]
gi|339758547|gb|EGQ43802.1| DNA repair and recombination protein RadA [Candidatus Nanosalina
sp. J07AB43]
Length = 316
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 92/187 (49%), Gaps = 13/187 (6%)
Query: 12 DNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGL 71
D ++ GC D LGGG+ +ITE+ E GS KTQ QL + QLP GGL
Sbjct: 74 DQREEMKRIMTGCEEFDEILGGGVETQAITEVYGEYGSAKTQISHQLATNVQLPRDEGGL 133
Query: 72 SASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNP---CDYIFVQSVHSVDQLLDIMPKIES 128
++Y+ TE F +R+ Q++ +N +P D I V + D + + + +
Sbjct: 134 GKGAVYVDTEDTFIPQRIEQMAE----ANGQDPEEVLDDIHVARAFNSDHQMLLADEAQE 189
Query: 129 FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAV 188
+N+ I L+V+DS+ A FRSD+ +L +R K L +A +AV
Sbjct: 190 ICQNND-----IGLVVVDSLTAQFRSDYVGR-GELAQRQQKLNKHMNTLLRLANAHNIAV 243
Query: 189 LVTNQVV 195
LVTNQV+
Sbjct: 244 LVTNQVM 250
>gi|54400704|ref|NP_001006101.1| DNA repair protein RAD51 homolog 3 [Danio rerio]
gi|53734042|gb|AAH83214.1| Rad51 homolog C (S. cerevisiae) [Danio rerio]
gi|182888768|gb|AAI64186.1| Rad51c protein [Danio rerio]
Length = 362
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 108/253 (42%), Gaps = 42/253 (16%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T +LL T C +D +GGG+P TE+ G GKTQ C+QL + Q+
Sbjct: 71 VTALDLLHQEQTLGSIVTFCSGLDDAIGGGVPVGKTTEICGAPGVGKTQLCMQLAVDVQI 130
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSH-----------------TFRPSNDHNPCDY 107
P GGL +LY+ TE F ++R+ ++ N
Sbjct: 131 PVFFGGLGGKALYIDTEGSFLVQRVADMAEAAVQHCTLLAEDTEQKGALEELNVEKILSN 190
Query: 108 IFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRS 167
+F+ H +LL + + F+ +RL+VIDSIA FR DF +DL +R+
Sbjct: 191 LFLVRCHDYVKLLAEVYLLPDFLSEHPE----VRLVVIDSIAFPFRHDF----EDLSQRT 242
Query: 168 FLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALG 227
L ++ L +A +AV++TNQ+ RV N + PALG
Sbjct: 243 RLLNGLAQQLIQLATQHRVAVVLTNQMTT-----------RVSN------GQSKLVPALG 285
Query: 228 IAWANCVNSRLFL 240
+W + RL L
Sbjct: 286 ESWGHAATQRLIL 298
>gi|448262384|pdb|4B2I|A Chain A, Humanised Monomeric Rada In Complex With Indazole
gi|448262385|pdb|4B2L|A Chain A, Humanised Monomeric Rada In Complex With L-methylester
Tryptophan
gi|448262386|pdb|4B32|A Chain A, Humanised Monomeric Rada In Complex With Napht-1-ol
gi|448262387|pdb|4B33|A Chain A, Humanised Monomeric Rada In Complex With Napht-2-ol
gi|448262388|pdb|4B34|A Chain A, Humanised Monomeric Rada In Complex With 2-amino
Benzothiazole
gi|448262389|pdb|4B35|A Chain A, Humanised Monomeric Rada In Complex With 4-methylester
Indole
gi|448262390|pdb|4B3C|A Chain A, Humanised Monomeric Rada In Complex With 5-hydroxy Indole
gi|448262391|pdb|4B3D|A Chain A, Humanised Monomeric Rada In Complex With 5-methyl Indole
gi|448262392|pdb|4B3D|C Chain C, Humanised Monomeric Rada In Complex With 5-methyl Indole
gi|453055723|pdb|4B3B|A Chain A, Humanised Monomeric Rada In Complex With Fhta Tetrapeptide
Length = 231
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 2/179 (1%)
Query: 16 TTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASS 75
T + + G +D+ LGGGI +ITE+ E GSGKTQ L + QLP GGL+ S
Sbjct: 3 TIGRISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSV 62
Query: 76 LYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSN 135
+++ TE F R+ +++ D + ++ +S Q+L ++ + E IK N
Sbjct: 63 MWIDTENTFRPERIREIAQNRGLDPDEVLKHIAYARAFNSNHQML-LVQQAEDMIKELLN 121
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+ P++L+++DS+ + FRS++ L +R K L +A + +AV VTNQV
Sbjct: 122 TDRPVKLLIVDSLTSHFRSEYIGR-GALAERQQKLAKHLADLHRLANLYDIAVFVTNQV 179
>gi|395509187|ref|XP_003758884.1| PREDICTED: DNA repair protein RAD51 homolog 2-like, partial
[Sarcophilus harrisii]
Length = 253
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 97/167 (58%), Gaps = 8/167 (4%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+PC S+TE+ SG GKTQFC+ +++ LP+ GGL S +Y+ TE F
Sbjct: 90 LDEALHGGVPCGSLTEVTGPSGCGKTQFCMMMSVLTTLPTVMGGLEGSVIYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS--VHSVDQLL--DIMPKIESFIKNSSNSRLPIRL 142
RL +++ FR + N + + S +H +L D++ +IES + ++ ++L
Sbjct: 150 ERLIRIAE-FRFPSFFNTGEKLLSMSSKIHLYQELTCNDVLKRIESLEEEIISN--GVKL 206
Query: 143 IVIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAV 188
++IDS+A++ R +FD + ++++RS + + +LK +A F + V
Sbjct: 207 LIIDSVASVVRKEFDTQLQGNMRERSNFLAREASLLKYLAEEFSIIV 253
>gi|209946348|gb|ACI97405.1| spindle B [Drosophila simulans]
Length = 341
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 131/283 (46%), Gaps = 50/283 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGGI ITEL +G GKTQ LQL L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGIVTRGITELCGAAGVGKTQLLLQLCLCVQLPRELGGLGKGVAYI 146
Query: 79 HTEFPFPMRRLHQLS---HTFRPSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL Q+S P + N IFV++ + LL ++ +I ++
Sbjct: 147 CTESSFPARRLLQMSKACEKRHPQMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR +D +R+ +++ L + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
G+ P LG+ WA+ +RL +SR V ++++M
Sbjct: 257 AT--------------------RDGQDEIPCLGLQWAHLGRTRLRVSR----VPKQHRMG 292
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ + T R L ++++P + EF IT +GV
Sbjct: 293 DQLI------------TVRKLEILYSPETPNDFAEFLITADGV 323
>gi|440798730|gb|ELR19797.1| DNA repair protein RAD51, putative [Acanthamoeba castellanii str.
Neff]
Length = 342
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 19/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GI SITE+ E +GKTQ C QL ++ QLP GG +LY+
Sbjct: 103 QVTTGSKELDKLLENGIETGSITEIFGEFRTGKTQLCHQLCVTCQLPLDQGGGEGKALYV 162
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F +RL ++ + + D + D + ++ D + ++ + + + S +
Sbjct: 163 DTEGTFRPQRLLAIAERYGLNGD-DVLDNVAYARAYNSDHQMQLLAQASAMMSESRYA-- 219
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
++++DS AL+R+D+ +L R + L+ +A FG+AV++TNQVV +
Sbjct: 220 ---MLIVDSATALYRTDYSG-RGELSARQMHLARFLRTLQRLADEFGVAVVITNQVVAQV 275
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ N + G P P G A+ +RL+L +
Sbjct: 276 DGNAAMFG------------ADPKKPIGGNIMAHASTTRLYLRK 307
>gi|112419535|dbj|BAF02935.1| RAD51 homolog [Populus nigra]
Length = 342
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GG+ SITE+ E SGKTQ C L ++ QLP GG ++Y+
Sbjct: 104 QITSGSRELDKILEGGVETGSITEMYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYI 163
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F N + + + ++ D ++ + S + +
Sbjct: 164 DAEGTFRPQRLLQIADRF-GLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETR---- 218
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV +
Sbjct: 219 -FALMIVDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQV 276
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G +G I P G A+ +RL L +
Sbjct: 277 D-------------GSAIFAGPQIKPIGGNIMAHASTTRLALRK---------------- 307
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G G E+ +C+ V+ +P LA+ F+I+ EGV V+
Sbjct: 308 -GRG-EERICK-------VISSPCLAEAEARFQISAEGVTDVK 341
>gi|254572065|ref|XP_002493142.1| Strand exchange protein, forms a helical filament with DNA that
searches for homology [Komagataella pastoris GS115]
gi|238032940|emb|CAY70963.1| Strand exchange protein, forms a helical filament with DNA that
searches for homology [Komagataella pastoris GS115]
gi|328352840|emb|CCA39238.1| DNA repair protein rhp51 [Komagataella pastoris CBS 7435]
Length = 362
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 90/175 (51%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 123 TTGSKKLDTLLGGGIETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLYIDT 182
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N+ + D + ++ D L ++ + + + S S
Sbjct: 183 EGTFRPIRLVSIAKRY-GLNEDDTLDNVAYARAYNADHQLQLLNQAAAMMSESRFS---- 237
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DSI AL+R+DF +L R K L+ +A FG+AVL+TNQVV
Sbjct: 238 -LLIVDSIMALYRTDFSGR-GELSARQMHVAKYMRTLQRLADEFGIAVLITNQVV 290
>gi|221053592|ref|XP_002258170.1| Meiotic recombination protein DMC1-like protein [Plasmodium
knowlesi strain H]
gi|193808003|emb|CAQ38707.1| Meiotic recombination protein DMC1-like protein,putative
[Plasmodium knowlesi strain H]
Length = 347
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 122/280 (43%), Gaps = 45/280 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G +DR LGGGI SITEL E+ GKTQ C L +SAQLP S GG + Y+
Sbjct: 109 KITTGSSSLDRTLGGGIESMSITELFGENRCGKTQICHTLAVSAQLPRSAGGGNGKVCYI 168
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F ++ +++ + + + D I + + L ++ + +
Sbjct: 169 DTEGTFRPEKICKIAERYGIDGE-DVLDNILYARAFTHEHLYQLLA-----VSAAKMCEE 222
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
P L+V+DSI +LFR DF +L +R K +L + F +AVL+TNQV+
Sbjct: 223 PFALLVVDSIISLFRVDFSG-RGELSERQQKLNKTLSVLSKLGEQFNIAVLITNQVM--- 278
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G V N P+ P G + +RL L +
Sbjct: 279 -SDPGATMTFVAN---------PMKPVGGHVIGHASTTRLSLRK---------------- 312
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
G G + VC+ V AP+L + C F+++ GV
Sbjct: 313 -GKGDQR-VCK-------VYDAPNLPEVDCIFQLSEGGVI 343
>gi|432960262|ref|XP_004086436.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Oryzias
latipes]
Length = 292
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 130/312 (41%), Gaps = 68/312 (21%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G +T LL T +D L GG+P +TE+ G GKT CLQL++
Sbjct: 17 GEAVTALELLQRERECGSITTFSSQLDHALKGGLPVGKVTEICGAPGVGKTHLCLQLSVD 76
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLS-----------------HTFRPSNDHNP 104
Q+P S GGL A +++ TE F ++R+ ++ T + N +
Sbjct: 77 IQIPRSFGGLEAQVIFMDTEGSFVLQRVVDIAAAVVRHFSLLAVDGEQKDTMQTFNMESI 136
Query: 105 CDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLK 164
IF+ H +L + + F+++ +RL+VIDS+A FR +DDL
Sbjct: 137 LSNIFLVRCHDYVELQAELLLLPDFLRDKPR----VRLLVIDSVAFPFRQH----LDDLS 188
Query: 165 KRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICP 224
+R+ L ++ + +MA +AV++TNQ+ ++ ++ + P
Sbjct: 189 QRTRLLQGLAQQVISMATRHNIAVVITNQMTTRLQDSQS-----------------HLVP 231
Query: 225 ALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLA 284
ALG W + +R+ L GS+ +V +P
Sbjct: 232 ALGEIWGHASTTRIILQ------------------WEGSQQVAA--------IVKSPCCI 265
Query: 285 DTSCEFEITREG 296
DT+ +++IT EG
Sbjct: 266 DTAIQYQITSEG 277
>gi|45685353|gb|AAS75434.1| putative Rad51B protein [Chlamydomonas reinhardtii]
Length = 392
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 114/256 (44%), Gaps = 43/256 (16%)
Query: 23 GCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEF 82
G P +D L G+P SITELV G GK+Q L L+ +P + GGL A +Y+ TE
Sbjct: 86 GLPTLDGALRLGVPVGSITELVGPGGVGKSQLSHMLALAVAMPEALGGLGAGVVYIDTER 145
Query: 83 PFPMRRLHQL----------------SHTFRP-SNDHNPCDYIFVQSVHSVDQLLDIMPK 125
F RL ++ +H +P + + V + S +QL+ +
Sbjct: 146 KFSAPRLQEMVHARVAEAAAAAGPQAAHVLQPLAVQGEVLRRVAVSTPGSTEQLMQTVEN 205
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDN----------------TMDDLKKRSFL 169
++ + RL+V+DSIAAL R+++ N + + R +
Sbjct: 206 LQHTVLQYRA-----RLVVVDSIAALARTEYGNPSSSGASGSVAGGGGGLVGSIMDRQQV 260
Query: 170 FFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIA 229
+I+ LKA+A + VLVTNQV + G G+ ++ + ALG
Sbjct: 261 LGRIAASLKALAESLRIPVLVTNQVTTRIGGGGGGGPGPPGS-----AANGTLTAALGAK 315
Query: 230 WANCVNSRLFLSRNED 245
WA+CVN RL L R ++
Sbjct: 316 WAHCVNLRLVLQRLQE 331
>gi|321471848|gb|EFX82820.1| hypothetical protein DAPPUDRAFT_299714 [Daphnia pulex]
Length = 341
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 20/225 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ LGGGI SITE+ E +GKTQ CL L ++ QLP GG LY+
Sbjct: 103 QVTTGSKELDKLLGGGIETGSITEIFGEFRTGKTQLCLTLAVTCQLPIDSGGAEGKCLYI 162
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + +S +
Sbjct: 163 DTEGTFRPERLLAVAERYGLSGS-DVLDNVACARAFNTDHQSQLLIQASAMMADSRYA-- 219
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 220 ---LLIVDSATALYRTDYSG-RGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 275
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRN 243
+ G + P P G A+ +RL+L +
Sbjct: 276 D-------------GAAMFAADPKKPIGGNIMAHASTTRLYLRKG 307
>gi|315056697|ref|XP_003177723.1| DNA repair protein RAD57 [Arthroderma gypseum CBS 118893]
gi|311339569|gb|EFQ98771.1| DNA repair protein RAD57 [Arthroderma gypseum CBS 118893]
Length = 608
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 105/199 (52%), Gaps = 22/199 (11%)
Query: 13 NPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLS 72
+P T + + P++D L GGI +TE+ ESG+GKTQF L L LS QLP+ H GLS
Sbjct: 113 HPPATGRISTLDPVLDAALNGGISTGYLTEVTGESGAGKTQFLLHLLLSVQLPAPH-GLS 171
Query: 73 ASSLYLHTEFPFPMRRLHQL-----------SHTFRPSNDHNPCDYIFVQSVHSVDQLLD 121
++LY+ TE RL QL HT RPS D+ + SV +VD L+
Sbjct: 172 KNALYISTESDLATNRLSQLLNEHRTIQALHPHTPRPSLDN-------IYSVTTVD--LE 222
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFD-NTMDDLKKRSFLFFKISGMLKAM 180
I ++ + SR I +++IDSI A +R++ + L +RS K+ L+ +
Sbjct: 223 SQEHIINYQIPVAISRYNIGIVIIDSITANYRAESSTENVSGLLERSGQLKKLGHFLRTL 282
Query: 181 AVGFGLAVLVTNQVVDLME 199
AV +A++V NQ+ D E
Sbjct: 283 AVTHNIAIVVANQISDGFE 301
>gi|385301680|gb|EIF45853.1| dna repair protein rad51 [Dekkera bruxellensis AWRI1499]
Length = 396
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI +ITE+ E +GK+Q C L ++AQLP GG LY+ T
Sbjct: 152 TTGSKQLDTLLGGGIETGAITEVFGEFRTGKSQLCHTLAITAQLPVDMGGGEGKCLYIDT 211
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F +++ D + ++ D + ++ + + S SR
Sbjct: 212 EGTFRPVRLVSIARRF-GLDENEALDNVAYARAYNADHQMQLLKQAAQMM---SQSRFS- 266
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS+ AL+R+D+ +L R K L+ +A FG+AVL+TNQVV
Sbjct: 267 -LLIVDSVMALYRTDYSGRA-ELSARQMHVAKFMRALQRLADEFGIAVLITNQVV 319
>gi|315427207|dbj|BAJ48820.1| DNA repair protein RadA [Candidatus Caldiarchaeum subterraneum]
gi|315427272|dbj|BAJ48884.1| DNA repair protein RadA [Candidatus Caldiarchaeum subterraneum]
gi|343485851|dbj|BAJ51505.1| DNA repair protein RadA [Candidatus Caldiarchaeum subterraneum]
Length = 320
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 136/299 (45%), Gaps = 46/299 (15%)
Query: 3 APMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSA 62
A +T + L + + T G +D +GGG+ +ITE E GSGK+Q C QL ++
Sbjct: 65 AWVTAKELAEIKTNIGRITTGSTRLDLLIGGGVETQAITEFFGEFGSGKSQLCHQLAVNV 124
Query: 63 QLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDI 122
QLP GGL S+LY+ TE F R+ ++++ + D I+ ++ S Q+L +
Sbjct: 125 QLPVRRGGLDGSALYIDTENTFRPERVTSMANSLGLNADEVLERIIYAEAYTSDHQIL-L 183
Query: 123 MPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAV 182
+ K + IK + ++LI++DS+ + FRS++ L +R K L +
Sbjct: 184 VEKADKIIKEKN-----VKLIIVDSLTSHFRSEYLG-RQLLPERQQKLNKHMHKLIRLCR 237
Query: 183 GFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
F +A +VTNQV + P++ ++S+ + P G + ++R+FL +
Sbjct: 238 AFNIAAVVTNQV--MSRPDD------------IFST-MAVYPIGGHIVGHTSHNRVFLRK 282
Query: 243 NEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
V + R +V +P+L + F+IT GV VE
Sbjct: 283 ------------------------VAGKPLRIARLVSSPYLPEGEAVFKITERGVEDVE 317
>gi|414145410|pdb|4A6P|A Chain A, Rada C-Terminal Atpase Domain From Pyrococcus Furiosus
gi|422919264|pdb|4A6X|A Chain A, Rada C-Terminal Atpase Domain From Pyrococcus Furiosus
Bound To Atp
gi|422919265|pdb|4A6X|B Chain B, Rada C-Terminal Atpase Domain From Pyrococcus Furiosus
Bound To Atp
gi|422919266|pdb|4A74|A Chain A, Rada C-Terminal Atpase Domain From Pyrococcus Furiosus
Bound To Amppnp
gi|422919267|pdb|4A74|B Chain B, Rada C-Terminal Atpase Domain From Pyrococcus Furiosus
Bound To Amppnp
gi|422919268|pdb|4A7O|A Chain A, Rada C-Terminal Atpase Domain From Pyrococcus Furiosus
Bound To Adp
Length = 231
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 2/179 (1%)
Query: 16 TTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASS 75
T + + G +D+ LGGGI +ITE+ E GSGKTQ L + QLP GGL+ S
Sbjct: 3 TIGRISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSV 62
Query: 76 LYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSN 135
+++ TE F R+ +++ R + +I+V + + + ++ + E IK N
Sbjct: 63 IWIDTENTFRPERIREIAQN-RGLDPDEVLKHIYVARAFNSNHQMLLVQQAEDKIKELLN 121
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+ P++L+++DS+ + FRS++ L +R K L +A + +AV VTNQV
Sbjct: 122 TDRPVKLLIVDSLTSHFRSEYIGR-GALAERQQKLAKHLADLHRLANLYDIAVFVTNQV 179
>gi|425767533|gb|EKV06102.1| DNA repair protein (Rad57), putative [Penicillium digitatum PHI26]
gi|425780447|gb|EKV18454.1| DNA repair protein (Rad57), putative [Penicillium digitatum Pd1]
Length = 529
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 98/181 (54%), Gaps = 11/181 (6%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P +D LGGGIP +TE+ ESGSGKTQF L L L+ QLP GL ++Y+ TE P
Sbjct: 111 PAMDALLGGGIPTGYVTEVTGESGSGKTQFLLSLCLAVQLPKPQ-GLQRRAMYISTEHPL 169
Query: 85 PMRRLHQLSH-----TFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
RL QL + P+ + I +++++D L+ I +F + R
Sbjct: 170 STPRLSQLLECHPVLSTLPAEQAPSLEDIL--TINAMD--LETQDHILNFHVPVAVERYN 225
Query: 140 IRLIVIDSIAALFRSDF-DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
I L++IDSI + +R++ +++ L KRS K+ +L+ +AV +A+++ NQV D
Sbjct: 226 IGLVIIDSITSNYRAEHASHSLQALAKRSSQLAKLGHLLRNLAVKEDVAIVLANQVSDRF 285
Query: 199 E 199
E
Sbjct: 286 E 286
>gi|209946340|gb|ACI97401.1| spindle B [Drosophila simulans]
Length = 341
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 131/283 (46%), Gaps = 50/283 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGG+ ITEL +G GKTQ LQL L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLCLCVQLPRELGGLGKGVAYI 146
Query: 79 HTEFPFPMRRLHQLS---HTFRPSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL Q+S P + N IFV++ + LL ++ +I ++
Sbjct: 147 CTESSFPARRLLQMSKACEKRHPQMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR +D +R+ +++ L + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
G+ P LG+ WA+ +RL +SR V ++++M
Sbjct: 257 AT--------------------RDGQDEIPCLGLQWAHLGRTRLRVSR----VPKQHRMG 292
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ + T R L ++++P + EF IT +GV
Sbjct: 293 DQLI------------TVRKLEILYSPETPNDFAEFLITADGV 323
>gi|195570925|ref|XP_002103454.1| GD18959 [Drosophila simulans]
gi|194199381|gb|EDX12957.1| GD18959 [Drosophila simulans]
gi|209946350|gb|ACI97406.1| spindle B [Drosophila simulans]
gi|209946352|gb|ACI97407.1| spindle B [Drosophila simulans]
Length = 341
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 131/283 (46%), Gaps = 50/283 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGG+ ITEL +G GKTQ LQL L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLCLCVQLPRELGGLGKGVAYI 146
Query: 79 HTEFPFPMRRLHQLS---HTFRPSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL Q+S P + N IFV++ + LL ++ +I ++
Sbjct: 147 CTESSFPARRLLQMSKACEKRHPQMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR +D +R+ +++ L + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
G+ P LG+ WA+ +RL +SR V ++++M
Sbjct: 257 AT--------------------RDGQDEIPCLGLQWAHLGRTRLRVSR----VPKQHRMG 292
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ + T R L ++++P + EF IT +GV
Sbjct: 293 DQLI------------TVRKLEILYSPETPNDFAEFLITADGV 323
>gi|195329020|ref|XP_002031209.1| GM24163 [Drosophila sechellia]
gi|194120152|gb|EDW42195.1| GM24163 [Drosophila sechellia]
Length = 341
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 131/283 (46%), Gaps = 50/283 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGG+ ITEL +G GKTQ LQL L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLCLCVQLPRELGGLGKGVAYI 146
Query: 79 HTEFPFPMRRLHQLS---HTFRPSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL Q+S P + N IFV++ + LL ++ +I ++
Sbjct: 147 CTESSFPARRLLQMSKACEKRHPQMELNFLGSIFVENHIEAEPLLACVINRIPRLMQQHG 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR +D +R+ +++ L + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
G+ P LG+ WA+ +RL +SR V ++++M
Sbjct: 257 AT--------------------RDGQDEIPCLGLQWAHLGRTRLRVSR----VPKQHRMG 292
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ + T R L ++++P + EF IT +GV
Sbjct: 293 DQLI------------TVRKLEILYSPETPNDFAEFLITADGV 323
>gi|315426193|dbj|BAJ47837.1| DNA repair protein RadA, partial [Candidatus Caldiarchaeum
subterraneum]
Length = 316
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 98/186 (52%), Gaps = 7/186 (3%)
Query: 9 NLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSH 68
+L+ ++ T G +D LGGG+ +ITEL+ E GSGKTQ C L + AQLP
Sbjct: 68 EVLERRKAMQRLTTGSRALDAMLGGGVETQAITELIGEFGSGKTQVCHTLCVMAQLPREQ 127
Query: 69 GGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIES 128
GGL S++Y+ TE F R+ Q++ R + + I SV++ L + ++
Sbjct: 128 GGLEGSAIYIDTEATFRPERISQIAEA-RGLDPQKILENIIFASVYNSSHLQLTVKELGR 186
Query: 129 FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAV 188
+++ + RL++IDSI + FR++F +++ L + +L+ V +AV
Sbjct: 187 YVE-----KYKARLVIIDSIISHFRAEFIGRGTLAERQQRLNDLLHRLLRTAQV-HNIAV 240
Query: 189 LVTNQV 194
++TNQV
Sbjct: 241 VLTNQV 246
>gi|374850436|dbj|BAL53425.1| DNA repair protein RadA [uncultured crenarchaeote]
Length = 320
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 136/299 (45%), Gaps = 46/299 (15%)
Query: 3 APMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSA 62
A +T + L + + T G +D +GGG+ +ITE E GSGK+Q C QL ++
Sbjct: 65 AWVTAKELAEIKTNIGRITTGSTRLDLLIGGGVETQAITEFFGEFGSGKSQLCHQLAVNV 124
Query: 63 QLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDI 122
QLP GGL S+LY+ TE F R+ ++++ + D I+ ++ S Q+L +
Sbjct: 125 QLPVRRGGLDGSALYIDTENTFRPERVTSMANSLGLNADEVLERIIYAEAYTSDHQIL-L 183
Query: 123 MPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAV 182
+ K + IK + ++LI++DS+ + FRS++ L +R K L +
Sbjct: 184 VEKADKIIKEKN-----VKLIIVDSLTSHFRSEYLG-RQLLPERQQKLNKHMHKLIRLCR 237
Query: 183 GFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
F +A +VTNQV + P++ ++S+ + P G + ++R+FL +
Sbjct: 238 AFNIAAVVTNQV--MSRPDD------------IFST-MAVYPIGGHIVGHTSHNRVFLRK 282
Query: 243 NEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
V + R +V +P+L + F+IT GV VE
Sbjct: 283 ------------------------VAGKPLRIARLVSSPYLPEGEAVFKITERGVEDVE 317
>gi|356565616|ref|XP_003551035.1| PREDICTED: DNA repair protein RAD51 homolog [Glycine max]
Length = 343
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GG+ SITEL E SGKTQ C L ++ QLP GG ++Y+
Sbjct: 105 QITTGSTELDKILEGGVETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYI 164
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F N + + + ++ D ++ + S + +R
Sbjct: 165 DAEGTFRPQRLLQIADRF-GLNGADVLENVAYARAYNTDHQSRLLLEAASMM---VETRF 220
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
+ +++DS AL+R+DF +L R K L+ +A FG+A+++TNQVV +
Sbjct: 221 AV--MIVDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAIVITNQVVSQV 277
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G +G I P G A+ +RL L +
Sbjct: 278 D-------------GSAVFAGPQIKPIGGNIMAHATTTRLALRK---------------- 308
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G G E+ +C+ V+ +P LA+ F+I EGV V+
Sbjct: 309 -GRG-EERICK-------VISSPCLAEAEARFQICAEGVSDVK 342
>gi|346470495|gb|AEO35092.1| hypothetical protein [Amblyomma maculatum]
Length = 337
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 104/225 (46%), Gaps = 20/225 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ LGGGI SITE+ E +GKTQ C L ++ QLP H G LY+
Sbjct: 99 QITTGSKELDKLLGGGIETGSITEMFGEFRTGKTQLCHMLAVTCQLPIEHSGGEGKCLYI 158
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + ++ D ++ + + + + +
Sbjct: 159 DTEGTFRPERLLAVADKYGLSG-QDVLDNVAYARAYNSDHQTQLLIQASAMMAETRYA-- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 216 ---LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 271
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRN 243
+ G S P P G A+ +RL+L +
Sbjct: 272 D-------------GAAMFSADPKKPIGGNIMAHASTTRLYLRKG 303
>gi|440295416|gb|ELP88329.1| DNA repair protein rad51, putative [Entamoeba invadens IP1]
Length = 357
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 124/285 (43%), Gaps = 44/285 (15%)
Query: 17 TEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSL 76
T + T G +D+ L GG SITEL E +GKTQ C QL +++QL GG ++
Sbjct: 115 TLRITSGSRELDKLLHGGFETGSITELFGEFRTGKTQLCHQLCVTSQLSIEDGGTEGRAM 174
Query: 77 YLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNS 136
Y+ TE F RL Q++ + N + + V H+ + + ++ + + S
Sbjct: 175 YIDTEGTFRPERLTQIAERY-SLNAEEALNNVVVARAHNTEHQMSLLQAASAMM-----S 228
Query: 137 RLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
+ LI+IDS AL+R+D+ +L R K L+ MA F +AV++TNQVV
Sbjct: 229 KDRYGLIIIDSATALYRTDYSG-RGELAARQMHLAKFLRSLQRMADEFSVAVVLTNQVVA 287
Query: 197 LMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNG 256
++ + G G P G A+ +RL+L +
Sbjct: 288 QVDGQASMFG------------GDNKKPVGGNIIAHASTTRLYLKK-------------- 321
Query: 257 GVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G G E +C+ V +P L ++ F IT G+ VE
Sbjct: 322 ---GKG-ESRICK-------VYDSPCLPESEAAFSITDGGIGDVE 355
>gi|330805267|ref|XP_003290606.1| hypothetical protein DICPUDRAFT_18874 [Dictyostelium purpureum]
gi|325079245|gb|EGC32854.1| hypothetical protein DICPUDRAFT_18874 [Dictyostelium purpureum]
Length = 275
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 36/230 (15%)
Query: 24 CPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFP 83
C ID+ L GG+P +TE G GKTQ QL ++ +P S GG+ S+Y+ TE
Sbjct: 37 CKEIDQILNGGVPLKKLTEFCGVPGIGKTQMAFQLAINTSIPKSLGGIEGKSIYIDTEGN 96
Query: 84 FPMRRL-----HQLSHTFRPSNDHNP--------CDYIFVQSVHSVDQLLDIMPKIESFI 130
+ +R+ H H + + P + I+ V++ +++ ++ +I F+
Sbjct: 97 YSCQRVREMAQHLYDHLEKINGPSEPLSITVDSILNNIYFYRVYNYMEMISLVHQIPLFL 156
Query: 131 KNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLV 190
+ + + +RLI++DSI FR DF D+ R+ L ++ L ++A F +AV+
Sbjct: 157 EQNKD----VRLIILDSITFPFRKDF----TDMALRTRLLLSLAQNLMSIATRFNVAVVF 208
Query: 191 TNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
NQV + PN+ + L P LG +WA+ R+ L
Sbjct: 209 MNQVTTKISPNKRESIL---------------VPYLGESWAHICTYRMIL 243
>gi|156084788|ref|XP_001609877.1| Rad51 protein [Babesia bovis T2Bo]
gi|154797129|gb|EDO06309.1| Rad51 protein, putative [Babesia bovis]
Length = 346
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 112/237 (47%), Gaps = 19/237 (8%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T L+ L K T G +D L GGI SITE++ + +GKTQ C L +++QLP
Sbjct: 91 TAAEYLECRLNLIKFTTGSTALDALLQGGIESGSITEIIGDFSTGKTQLCHTLAITSQLP 150
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
G L++ T+ F RL +++ F S+ + ++V+ V + +Q D++ +
Sbjct: 151 IEQNGGEGKCLWIDTQNSFRPERLGPIANRFGLSHAECVANIVYVK-VSNTEQQFDMLVE 209
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
++ S ++++DS AL+R+D+ +L R K LK +A +G
Sbjct: 210 AAHYMAQSR-----FAMLIVDSATALYRTDYTGR-GELAARQMSLGKYFRALKRLADIYG 263
Query: 186 LAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+AV+VTNQV+ RV N+ + G P G A +RLFL +
Sbjct: 264 VAVVVTNQVM-----------ARVDNMSS-FMGGNDKVPVGGHVVAQNTQTRLFLRK 308
>gi|290462499|gb|ADD24297.1| DNA repair protein RAD51 homolog 1 [Lepeophtheirus salmonis]
Length = 350
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 122/279 (43%), Gaps = 45/279 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITEL E +GK+Q C L ++ QLP HGG LY+
Sbjct: 112 QITTGSKELDKLLKGGIETGSITELFGEFRTGKSQLCHTLAVTCQLPIDHGGAEGKCLYI 171
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + + D + ++ D ++ + + + S +
Sbjct: 172 DTEGTFRPERLLAVAERYNLSGN-DVLDNVAYARAYNSDHQSQLLIQASAMMAESRYA-- 228
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
LI++DS AL+R+D+ +L R + ML +A FG+ V++TNQVV +
Sbjct: 229 ---LIIVDSSTALYRTDYSG-RGELSTRQMHLARFLRMLLRLADEFGVGVVITNQVVAQV 284
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G S P P G A+ +RL+L +
Sbjct: 285 D-------------GAAMFSADPKKPIGGNIMAHASTTRLYLRK---------------- 315
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
G G E +C+ + +P LA+ F IT +G+
Sbjct: 316 -GRG-EQRICK-------IYDSPCLAEGEAIFAITADGI 345
>gi|343485007|dbj|BAJ50661.1| DNA repair protein RadA [Candidatus Caldiarchaeum subterraneum]
Length = 333
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 98/186 (52%), Gaps = 7/186 (3%)
Query: 9 NLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSH 68
+L+ ++ T G +D LGGG+ +ITEL+ E GSGKTQ C L + AQLP
Sbjct: 85 EVLERRKAMQRLTTGSRALDAMLGGGVETQAITELIGEFGSGKTQVCHTLCVMAQLPREQ 144
Query: 69 GGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIES 128
GGL S++Y+ TE F R+ Q++ R + + I SV++ L + ++
Sbjct: 145 GGLEGSAIYIDTEATFRPERISQIAEA-RGLDPQKILENIIFASVYNSSHLQLTVKELGR 203
Query: 129 FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAV 188
+++ + RL++IDSI + FR++F +++ L + +L+ V +AV
Sbjct: 204 YVE-----KYKARLVIIDSIISHFRAEFIGRGTLAERQQRLNDLLHRLLRTAQV-HNIAV 257
Query: 189 LVTNQV 194
++TNQV
Sbjct: 258 VLTNQV 263
>gi|332374336|gb|AEE62309.1| unknown [Dendroctonus ponderosae]
Length = 338
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 104/226 (46%), Gaps = 22/226 (9%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
+ G +DR LGGGI SITEL E +GKTQ C L ++ QLP+ GG LY+ T
Sbjct: 102 STGSKELDRLLGGGIETGSITELFGEFRTGKTQICHTLAVTCQLPTDCGGAEGKCLYIDT 161
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F+ D + ++ D ++ + + S +
Sbjct: 162 EGTFRPERLLAVAERFK-MEPQTVLDNVAYARAYNTDHQTQLLLHASAMMAESRYA---- 216
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+V+DS AL+RS++ +L R + ML +A FG+AV++TNQVV ++
Sbjct: 217 -LLVVDSAMALYRSEYSGR-GELAARQMHLSRFLRMLLRLADEFGVAVVITNQVVAQVD- 273
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL--SRNE 244
G + P P G A+ +RL+L RNE
Sbjct: 274 ------------GAAMFNADPKKPIGGHIMAHSSTTRLYLRKGRNE 307
>gi|156097941|ref|XP_001615003.1| meiotic recombination protein DMC1-like protein [Plasmodium vivax
Sal-1]
gi|148803877|gb|EDL45276.1| meiotic recombination protein DMC1-like protein, putative
[Plasmodium vivax]
Length = 347
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 126/294 (42%), Gaps = 45/294 (15%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T L+ K T G +D+ LGGGI SITEL E+ GKTQ C L +SAQL
Sbjct: 95 ITAHQLVHKRSKVLKITTGSSTLDKTLGGGIESMSITELFGENRCGKTQICHTLAVSAQL 154
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMP 124
P S GG + Y+ TE F ++ +++ + + + D I + + L ++
Sbjct: 155 PRSVGGGNGKVCYIDTEGTFRPEKICKIAERYGIDGE-DVLDNILYARAFTHEHLYQLLA 213
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
+ + P L+V+DSI +LFR DF +L +R K +L + F
Sbjct: 214 -----VSAAKMCEEPFALLVVDSIISLFRVDFSG-RGELSERQQKLNKTMSILSKLGEQF 267
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
+AVL+TNQV+ + G + N P+ P G + +RL L +
Sbjct: 268 NIAVLITNQVM----SDPGATMTFIAN---------PMKPVGGHVIGHASTTRLSLRK-- 312
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
G G + VC+ V AP+L + C F+++ GV
Sbjct: 313 ---------------GKGDQR-VCK-------VYDAPNLPEVDCIFQLSDGGVI 343
>gi|16605546|emb|CAC86603.1| Rad51A protein [Physcomitrella patens]
gi|16605577|emb|CAC82996.1| Rad51A protein [Physcomitrella patens]
Length = 342
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 125/284 (44%), Gaps = 45/284 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G D L GGI SITE+ E SGK+Q C L ++ QLP GG +LY+
Sbjct: 104 QITTGAKEFDNILEGGIETGSITEIYGEFRSGKSQICHTLCVTCQLPLDQGGGEGKALYI 163
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ + N + D + ++ D + ++ + S + + +R
Sbjct: 164 DAEGTFRPQRLLQIAEKY-GLNGQDVLDNVAYARAYNTDHQMKLLVEAASMM---AETRF 219
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+V+DS AL+R+D+ +L R K + +A FG+AV++TNQVV +
Sbjct: 220 A--LMVVDSSTALYRTDYSG-RGELAARQVHLAKFLRGCQKIADEFGIAVVITNQVVAQV 276
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ + NG +PI G A+ +RL + +
Sbjct: 277 DGSAMFNG----------PQHKPIG---GNIIAHASTTRLSVRK---------------- 307
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVER 302
G G E R + VV +P LA+ F+IT EG V+
Sbjct: 308 -GRGEE--------RVIKVVASPCLAEQEARFQITNEGAVDVKE 342
>gi|164428179|ref|XP_957194.2| hypothetical protein NCU01771 [Neurospora crassa OR74A]
gi|16416086|emb|CAB91223.2| related to RAD57 protein [Neurospora crassa]
gi|157072044|gb|EAA27958.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 510
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 106/231 (45%), Gaps = 52/231 (22%)
Query: 8 QNLLDNP--LTTEKCTVGC--PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQ 63
Q L + P L + T+ P IDR LGGGIP +TE+ ESG+GKTQF L L LS Q
Sbjct: 91 QTLKNTPASLAAQWQTISTLDPDIDRALGGGIPAGYVTEITGESGAGKTQFLLTLLLSVQ 150
Query: 64 LPSSHGGLSASSLYLHTEFPFPMRRLHQLSHT------------------------FRPS 99
LP H GL +LY+ TE P RRL Q+ T RPS
Sbjct: 151 LPPPH-GLGRPALYISTEAPLSTRRLAQMLTTNPFYADLDSESGRGGEGGGGGGGGKRPS 209
Query: 100 NDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNT 159
D+ + S D +L +E +N I L+V+DS+AA +R++FD +
Sbjct: 210 LDN--IISTVTPDLESQDHILTYQVPVEIERRN-------IGLLVLDSVAANYRAEFDRS 260
Query: 160 MDD--------------LKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
+ + R+ ++ L+ +A + LAV+V+NQV D
Sbjct: 261 SKEAATSSSTPGARSSNMGARTAELVRLGMQLRDLAQKYNLAVVVSNQVAD 311
>gi|290559566|gb|EFD92895.1| DNA repair and recombination protein RadA [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 348
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 15/217 (6%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
M+ D + ++ + G + LGGG+ +ITE E GSGK+Q QL + QL
Sbjct: 94 MSGLEFEDKRKSVQRISTGSEAFNILLGGGVETQAITECYGEYGSGKSQMAFQLAVDVQL 153
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMP 124
P GGL ++++ TE F R+ QL+ + + + I + +S D + ++
Sbjct: 154 PVEKGGLDGHAIWIDTEGTFRPSRIEQLAAS-KGLDPKQALQNIKIGRAYSSDHQVLLVN 212
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLKAMAV 182
K+ + N+ I+LIV+DS+ ALFR+++ T+ D +++ + L+ +A
Sbjct: 213 KVPELV----NADPKIKLIVVDSMMALFRAEYVGRGTLADRQQKVNVVLH---TLQRLAD 265
Query: 183 GFGLAVLVTNQVV---DLM--EPNEGVNGLRVGNLGC 214
F +AV +TNQV+ D+M +P V G +G++
Sbjct: 266 RFNIAVYITNQVMARPDVMFGDPTAAVGGHIIGHVAT 302
>gi|380027258|ref|XP_003697346.1| PREDICTED: DNA repair protein XRCC3-like [Apis florea]
Length = 254
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 25/225 (11%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T GC D L GGI IT++ + +GKTQ LQL L+ QLP + GGL+A ++Y+ T
Sbjct: 19 TTGCLKFDTLLQGGITNRGITQIYGAASTGKTQLALQLCLTVQLPKTDGGLAAGAIYICT 78
Query: 81 EFPFPMRRLHQLSHTFRPSNDHN-PCDYIFVQSVHSVDQL-LDIMPKIESFIKNSSNSRL 138
E FP RRL +L + H D +FV+ + ++++L + ++ +I + I S
Sbjct: 79 ESIFPSRRLQELIQKLEITKKHGINGDLVFVEHISTIEELEICLLHRIPTLI-----SVQ 133
Query: 139 PIRLIVIDSIAALFR-SDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDL 197
I LIVIDSIAA +R D+ + ++ K +I G + V+ NQV
Sbjct: 134 KIGLIVIDSIAAPYRVEDWKDKSNNRAKS----LRIIGQQLHKLCKNNICVVCINQVTTD 189
Query: 198 MEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ N + L V P LG W++ + + + R
Sbjct: 190 VYSNVLNDNLNVR-------------PTLGTTWSSMITTSIQFYR 221
>gi|225714670|gb|ACO13181.1| DNA repair protein RAD51 homolog 1 [Lepeophtheirus salmonis]
Length = 350
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 122/279 (43%), Gaps = 45/279 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITEL E +GK+Q C L ++ QLP HGG LY+
Sbjct: 112 QITTGSKELDKLLKGGIETGSITELFGEFRTGKSQLCHTLAVTCQLPIDHGGAEGKCLYI 171
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + + D + ++ D ++ + + + + L
Sbjct: 172 DTEGTFRPERLLAVAERYNLSGN-DVLDNVAYARAYNSDHQSQLLIQASAMM-----AEL 225
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
LI++DS AL+R+D+ +L R + ML +A FG+ V++TNQVV +
Sbjct: 226 RYALIIVDSSTALYRTDYSGR-GELSTRQMHLARFLRMLLRLADEFGVGVVITNQVVAQV 284
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G S P P G A+ +RL+L +
Sbjct: 285 D-------------GAAMFSADPKKPIGGNIMAHASTTRLYLRK---------------- 315
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
G G E +C+ + +P LA+ F IT +G+
Sbjct: 316 -GRG-EQRICK-------IYDSPCLAEGEAIFAITADGI 345
>gi|427789927|gb|JAA60415.1| Putative meiotic recombination protein dmc1 [Rhipicephalus
pulchellus]
Length = 337
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ LGGGI SITE+ E +GKTQ C L ++ QLP H G LY+
Sbjct: 99 QITTGSKELDKLLGGGIETGSITEVFGEFRTGKTQLCHMLAVTCQLPIEHSGGEGKCLYI 158
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + ++ D ++ + + + + +
Sbjct: 159 DTEGTFRPERLLAVADKYGLSGP-DVLDNVAYARAYNSDHQTQLLIQASAMMAETRYA-- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AVL+TNQVV +
Sbjct: 216 ---LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVLITNQVVAQV 271
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G S P P G A+ +RL+L +
Sbjct: 272 D-------------GAAMFSADPKKPIGGNIMAHASTTRLYLRK 302
>gi|225444585|ref|XP_002273803.1| PREDICTED: DNA repair protein RAD51 homolog [Vitis vinifera]
gi|297738498|emb|CBI27743.3| unnamed protein product [Vitis vinifera]
Length = 337
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 128/283 (45%), Gaps = 45/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GG+ SITE+ E SGKTQ C L ++ QLP GG ++Y+
Sbjct: 99 QITSGSRELDKILEGGLETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYI 158
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F N + + + ++ D ++ + S + + +
Sbjct: 159 DAEGTFRPQRLLQIADRF-GLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFA-- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV +
Sbjct: 216 ---LMIVDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQV 271
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G +G I P G A+ +RL L +
Sbjct: 272 D-------------GSAIFAGPQIKPIGGNIMAHASTTRLALRK---------------- 302
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G G E+ +C+ V+ +P LA+ F+I+ EGV V+
Sbjct: 303 -GRG-EERICK-------VISSPCLAEADARFQISAEGVTDVK 336
>gi|242050664|ref|XP_002463076.1| hypothetical protein SORBIDRAFT_02g037320 [Sorghum bicolor]
gi|241926453|gb|EER99597.1| hypothetical protein SORBIDRAFT_02g037320 [Sorghum bicolor]
Length = 344
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 126/283 (44%), Gaps = 45/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E SGKTQ C L ++ QLP GG +LY+
Sbjct: 106 QVTTGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYI 165
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F N + + + ++ D ++ + S + + +
Sbjct: 166 DAEGTFRPQRLLQIADRF-GLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFA-- 222
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+V+DS AL+R+DF +L R K L+ +A FG+AV++TNQVV +
Sbjct: 223 ---LMVVDSATALYRTDFSGR-GELSARQMHMAKFLRSLQKLADEFGVAVVITNQVVAQV 278
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G +G P G A+ +RL L +
Sbjct: 279 D-------------GSAMFAGPQFKPIGGNIMAHASTTRLALRK---------------- 309
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G G E+ +C+ V+ +P LA+ F++ EGV V+
Sbjct: 310 -GRG-EERICK-------VISSPCLAEAEARFQLASEGVADVK 343
>gi|356547988|ref|XP_003542386.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Glycine max]
Length = 344
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GG+ SITEL E SGKTQ C L ++ QLP GG ++Y+
Sbjct: 106 QITTGSRELDKILEGGVETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYI 165
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F N + + + ++ D ++ + S + +R
Sbjct: 166 DAEGTFRPQRLLQIADRF-GLNGVDVLENVAYARAYNTDHQSRLLLEAASMM---VETRF 221
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
+ +++DS AL+R+DF +L R K L+ +A FG+A+++TNQVV +
Sbjct: 222 AV--MIVDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAIVITNQVVSQV 278
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G +G I P G A+ +RL L +
Sbjct: 279 D-------------GSAVFAGPQIKPIGGNIMAHATTTRLALRK---------------- 309
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G G E+ +C+ V+ +P LA+ F+I EGV V+
Sbjct: 310 -GRG-EERICK-------VISSPCLAEAEARFQICAEGVSDVK 343
>gi|391345455|ref|XP_003747001.1| PREDICTED: DNA repair protein RAD51 homolog B-like [Metaseiulus
occidentalis]
Length = 343
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 21/222 (9%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ LGGGI S+TEL E +GKTQ C QL ++ QLP + G +LY+ T
Sbjct: 107 TTGSAELDKLLGGGIETGSVTELFGEFRTGKTQLCHQLAVTCQLPIDNNGAEGKALYIDT 166
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D ++ + + + + +
Sbjct: 167 EGEFRPERLLAVAERYGLEGEQ-VLDNVSCAKAYNTDHQTQLLMEAGALMSENRYA---- 221
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+++DS AL+RSD+ +L R K ML +A FG+AV++TNQV+
Sbjct: 222 -LLIVDSATALYRSDYSGR-SELSARQMHMAKFLRMLGRLADEFGVAVVITNQVM----- 274
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
V+G L+ P P G A+ +RL+L +
Sbjct: 275 -AQVDG------ASLFQD--PRRPVGGNIMAHASTTRLYLKK 307
>gi|47087371|ref|NP_998577.1| DNA repair protein RAD51 homolog 2 [Danio rerio]
gi|30354420|gb|AAH52122.1| Zgc:56581 [Danio rerio]
Length = 373
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 7/220 (3%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P +DR L GG+P ++TE+ SG GKTQ C+ L++ A LP S GGL + +Y+ TE F
Sbjct: 84 PALDRLLHGGLPRGALTEVTGPSGCGKTQLCMMLSVLATLPKSLGGLDSGVIYIDTESAF 143
Query: 85 PMRRLHQLSHTFRPSNDHNPCDYI-FVQSVHSVDQLL--DIMPKIESFIKNSSNSRLPIR 141
RL +++ + P + VH +L D++ ++E ++ R
Sbjct: 144 SAERLVEMAQSRFPEFFSVKERLLEMAARVHLFRELTCQDVLKRLERLEEDIIACR--AG 201
Query: 142 LIVIDSIAALFRSDFDNTM-DDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+++DS+A++ R +FD ++ +L RS + + +LK ++ F + V++TNQ+ +
Sbjct: 202 LVILDSVASVVRKEFDTSLPGNLTHRSNFLGQEAAVLKYLSQEFCIPVVLTNQITTHVGE 261
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
+ SG + ALG W++ VN+RL +
Sbjct: 262 KLHCPQWNQTDASFEEDSGF-VTAALGNTWSHSVNTRLIV 300
>gi|10944745|emb|CAC14091.1| RAD51C protein [Arabidopsis thaliana]
Length = 363
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 119/257 (46%), Gaps = 46/257 (17%)
Query: 9 NLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSH 68
++L + + T C +D LGGGI C +TE+ G GKTQ +QL+++ Q+P
Sbjct: 94 DMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPREC 153
Query: 69 GGLSASSLYLHTEFPFPMRRLHQLS--------------HTFRPSND-----HNPCDYIF 109
GGL ++Y+ TE F ++R Q++ H +N + + IF
Sbjct: 154 GGLGGKAIYIDTEGSFMVKRALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIF 213
Query: 110 VQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFL 169
V S + + ++ +E FI + + ++++++DSI FR D+ DDL +R+ +
Sbjct: 214 YFRVCSYTEQIALVNHLEKFISENKD----VKVVIVDSITFHFRQDY----DDLAQRTRV 265
Query: 170 FFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGR-PICPALGI 228
+++ +A F LAV++ NQV +S G + ALG
Sbjct: 266 LSEMALKFMKLAKKFSLAVVLLNQVT------------------TKFSEGSFQLALALGD 307
Query: 229 AWANCVNSRLFLSRNED 245
+W++ +R+ L N D
Sbjct: 308 SWSHSCTNRVILYWNGD 324
>gi|388493808|gb|AFK34970.1| unknown [Medicago truncatula]
Length = 269
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 111/244 (45%), Gaps = 44/244 (18%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T C +D LGGGI C +TE+ G GKTQ +QL ++ Q+P +GGL ++Y+ T
Sbjct: 12 TTSCLDLDNILGGGINCKEVTEIGGVPGIGKTQIGIQLAVNVQIPLDYGGLGGKAIYIDT 71
Query: 81 EFPFPMRRLHQL-----------SHTFRPSND--------HNPCDYIFVQSVHSVDQLLD 121
E F + R+ Q+ SH F N ++ + IF V S + +
Sbjct: 72 EGSFMVERVLQIAEACIEDMSEYSHHFHKDNQAFGVKMHPNSILENIFYFRVCSYTEQIA 131
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
++ ++ F+ + +++I+IDS+ FR DF DD+ R+ L ++S L +A
Sbjct: 132 LVNYLDKFVTEHKD----VKIIIIDSVTFHFRQDF----DDMALRTRLLGEMSLKLMKLA 183
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
LAV++ NQV S + ALG +W++ +R+ L
Sbjct: 184 KNLSLAVVMLNQVTTKH-----------------IESSFQLTLALGDSWSHSCTNRIILY 226
Query: 242 RNED 245
N D
Sbjct: 227 WNGD 230
>gi|357130009|ref|XP_003566651.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Brachypodium
distachyon]
Length = 364
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 116/225 (51%), Gaps = 24/225 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGGIP +TE+V SG GKTQFCL+L L A LP +GGL+ +Y+ TE F
Sbjct: 90 LDEALGGGIPVGKLTEVVGPSGIGKTQFCLKLALLATLPECYGGLNGRVVYIDTESKFSS 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQ---SVHSVDQLLDIMP-KIESFIKNSSNSRLP--- 139
RR+ ++ P IF Q + ++L + P + F K+ ++
Sbjct: 150 RRMIEIGQKSIPQ--------IFRQEGLAQKMTGRILVMRPTSLSDFTKSLEQMKVTLLQ 201
Query: 140 --IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDL 197
++L+++DS+AAL ++ + D + + L + +S LK++A + V+VTNQV
Sbjct: 202 NDVKLLIVDSMAALMSTENERGASD-RTQHPLRWALS-FLKSIAEFSRIPVIVTNQVRS- 258
Query: 198 MEPNEGVNGL-RVGNLGCLYSSGR---PICPALGIAWANCVNSRL 238
++G + L V G + + R + ALGI WA+ V RL
Sbjct: 259 QSKDDGYHYLFEVKKKGDSHGTERFESHLVAALGIQWAHAVTIRL 303
>gi|440295039|gb|ELP87968.1| meiotic recombination protein dmc1, putative [Entamoeba invadens
IP1]
Length = 340
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%), Gaps = 7/177 (3%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G D LGGGI S+TE+ E +GKTQ C L ++AQLP++ G + Y+
Sbjct: 102 KITTGSAQFDTLLGGGIETMSVTEMFGEFRTGKTQLCHTLAVTAQLPANLKGANGKVAYI 161
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ F + D I + ++ +Q D++ +I + +
Sbjct: 162 DTEGTFRPERITQIAERF-GVDQTAVLDNILIARAYTHEQQFDLLVEIAARMAEDR---- 216
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
RL+++DS+ +LFR DF +L +R K+ L ++ F +AV++TNQV+
Sbjct: 217 -FRLLIVDSVTSLFRVDFSGR-GELSERQQKLGKMMNRLIKISEEFNVAVVITNQVM 271
>gi|410980625|ref|XP_003996677.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Felis catus]
Length = 337
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 45/264 (17%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGGIP TE+ G GKTQ C+QL +
Sbjct: 73 GKKCTALELLEQEHTQSFIITFCSALDNILGGGIPLTKTTEICGVPGVGKTQLCMQLAVD 132
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDH-------------- 102
Q+P GG+ ++++ TE F + R+ L+ H + H
Sbjct: 133 VQIPECFGGVEGEAVFIDTEGSFMVDRVVDLATACIQHLHLIAEAHMGEEHPKALEDFTL 192
Query: 103 -NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
N +I+ +LL + + F+ S +RL+++D IA FR D +D
Sbjct: 193 ENILSHIYYFRCRDYTELLAQVYLLPDFLSEHSK----VRLVIVDGIAFPFRHD----LD 244
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL RS L ++ + ++A LAVL+TNQ+ ++ N+ +
Sbjct: 245 DLSLRSRLLNGLAQQMISLANNHRLAVLLTNQMTTKIDRNQAL----------------- 287
Query: 222 ICPALGIAWANCVNSRLFLSRNED 245
+ PALG +W + RL +++
Sbjct: 288 LVPALGESWGHAATIRLIFHWDQN 311
>gi|378755179|gb|EHY65206.1| DNA repair protein [Nematocida sp. 1 ERTm2]
Length = 338
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 25/231 (10%)
Query: 15 LTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSAS 74
L + T G +D+ LGGGI SITEL E +GKTQ C L ++ QLP+ GG +
Sbjct: 95 LQMKMITTGSSELDKLLGGGIETGSITELFGEFRTGKTQICHMLAVTCQLPTEMGGCNGK 154
Query: 75 SLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDY---IFVQSVHSVDQLLDIMPKIESFIK 131
++Y+ TE F RL +++ + + +P D + V ++VD L+++ +
Sbjct: 155 AIYIDTESTFRAERLIEIAKRY----ELDPTDVLSKVCVARAYNVDHQLELVKMAGGLMA 210
Query: 132 NSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVT 191
+ RL+++DSI A +R+DF +L R L +A + +AV++T
Sbjct: 211 SGE-----YRLLIVDSIIANYRTDFSGR-GELSARQMHLSTYLRSLMQLADEYNVAVVIT 264
Query: 192 NQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
NQVV ++ + G G P G A+ +RL+L +
Sbjct: 265 NQVVATVDGAAAMFG------------GDTKKPTGGHVLAHASATRLYLRK 303
>gi|115461801|ref|NP_001054500.1| Os05g0121700 [Oryza sativa Japonica Group]
gi|54287477|gb|AAV31221.1| putative DNA repair protein RAD51 [Oryza sativa Japonica Group]
gi|113578051|dbj|BAF16414.1| Os05g0121700 [Oryza sativa Japonica Group]
gi|215741250|dbj|BAG97745.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741600|dbj|BAG98095.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195995|gb|EEC78422.1| hypothetical protein OsI_18249 [Oryza sativa Indica Group]
gi|222630019|gb|EEE62151.1| hypothetical protein OsJ_16938 [Oryza sativa Japonica Group]
Length = 363
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 115/228 (50%), Gaps = 30/228 (13%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GGIP +TE+V SG GKTQFCL+L L A LP +GGL+ LY+ TE F
Sbjct: 89 LDEALHGGIPAGKLTEVVGPSGIGKTQFCLKLALLATLPECYGGLNGRVLYIDTESKFSS 148
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQ---SVHSVDQLLDIMP-KIESFIKNSSNSRLP--- 139
RR+ ++ P IF Q + ++L + P + F K+ ++
Sbjct: 149 RRMIEIGEKSFPQ--------IFRQEGLAQKMAGRILVLRPTSLSEFTKSLEQMKVTLLQ 200
Query: 140 --IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDL 197
++L+V+DS+AAL S+ + + L++ L + +S LK++A + V+VTNQV
Sbjct: 201 HDVKLLVVDSMAALMSSEIEKSATGLRQHP-LRWALS-FLKSIAEFSQIPVVVTNQVRS- 257
Query: 198 MEPNEGVNGLRVG-NLGCLYSSGRP------ICPALGIAWANCVNSRL 238
+ N+ +G R + Y S + ALGI WA+ V RL
Sbjct: 258 -QSND--DGYRYSFEVEKKYDSNNAEGFESHLVAALGIQWAHAVTIRL 302
>gi|194691108|gb|ACF79638.1| unknown [Zea mays]
gi|195620070|gb|ACG31865.1| DNA repair protein RAD51 [Zea mays]
gi|414887274|tpg|DAA63288.1| TPA: DNA repair protein RAD51-like protein A [Zea mays]
Length = 340
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 126/283 (44%), Gaps = 45/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E SGKTQ C L ++ QLP GG +LY+
Sbjct: 102 QVTTGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYI 161
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F N + + + ++ D ++ + S + + +
Sbjct: 162 DAEGTFRPQRLLQIADRF-GLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFA-- 218
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+V+DS AL+R+DF +L R K L+ +A FG+AV++TNQVV +
Sbjct: 219 ---LMVVDSATALYRTDFSGR-GELSARQMHMAKFLRSLQKLADEFGVAVVITNQVVAQV 274
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G +G P G A+ +RL L +
Sbjct: 275 D-------------GSAMFAGPQFKPIGGNIMAHASTTRLALRK---------------- 305
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G G E+ +C+ V+ +P LA+ F++ EG+ V+
Sbjct: 306 -GRG-EERICK-------VISSPCLAEAEARFQLASEGIADVK 339
>gi|325190521|emb|CCA25020.1| DNA repair protein RAD51 putative [Albugo laibachii Nc14]
Length = 342
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 23/231 (9%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
+ G +D L GG SITEL E +GKTQ C QL ++ QLP GG +L++ T
Sbjct: 107 STGSSALDELLKGGFETGSITELFGEFRTGKTQLCHQLCVTCQLPVDRGGGEGKALFIDT 166
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F +RL ++ + D + F ++ +S Q + ++ + + + S +
Sbjct: 167 EGTFRPQRLVAIAERYGLDGDSVLDNVAFARAYNSEHQ-MQLLIQASAMMAESRYA---- 221
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+++DS ALFR+DF +L R K L MA FG+AV++TNQ+ P
Sbjct: 222 -LVIVDSATALFRTDFSGR-GELAARQQELAKFLRALTKMADEFGVAVVITNQMT--ANP 277
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALG--IAWANCVNSRLFLSRNEDFVVR 249
+ G+ + P+ P G +A A+C RL +R E+ V++
Sbjct: 278 DSGM------------FAKDPLQPIGGNIMAHASCTRLRLRKARGENRVMK 316
>gi|18420327|ref|NP_568402.1| DNA repair protein RAD51-like 1 [Arabidopsis thaliana]
gi|55976288|sp|P94102.1|RAD51_ARATH RecName: Full=DNA repair protein RAD51 homolog 1; AltName:
Full=Rad51-like protein 1; Short=AtRAD51
gi|1706947|gb|AAB37762.1| RAD51 homolog [Arabidopsis thaliana]
gi|1706949|gb|AAC49555.1| AtRAD51 [Arabidopsis thaliana]
gi|2388778|emb|CAA04529.1| Rad51-like protein [Arabidopsis thaliana]
gi|332005514|gb|AED92897.1| DNA repair protein RAD51-like 1 [Arabidopsis thaliana]
Length = 342
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 123/279 (44%), Gaps = 45/279 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITEL E SGKTQ C L ++ QLP GG ++Y+
Sbjct: 104 QITSGSRELDKVLEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKAMYI 163
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F N + + + ++ D ++ + S + + +
Sbjct: 164 DAEGTFRPQRLLQIADRF-GLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFA-- 220
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV +
Sbjct: 221 ---LLIVDSATALYRTDFSG-RGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQV 276
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G +G P G A+ +RL L +
Sbjct: 277 D-------------GSALFAGPQFKPIGGNIMAHATTTRLALRKGR-------------- 309
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+E+ +C+ V+ +P L + F+I+ EGV
Sbjct: 310 ----AEERICK-------VISSPCLPEAEARFQISTEGV 337
>gi|225435171|ref|XP_002281874.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Vitis vinifera]
Length = 439
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 109/225 (48%), Gaps = 21/225 (9%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGGIP +TELV G GKTQFCL+L+L A LP+S+GGL +Y+ E F
Sbjct: 91 LDEALGGGIPFGVLTELVGPPGIGKTQFCLKLSLLASLPASYGGLDGRVIYIDAESKFSS 150
Query: 87 RRLHQLSHTFRPSNDH------NPCDYIFVQSVHSVDQLLDIMPKIE-SFIKNSSNSRLP 139
RR+ ++ P H I V S+ + + + I+ S ++N
Sbjct: 151 RRMIEIGSKSFPEIFHVEGMAKEMAGRILVLRPTSLSEFTESLQHIKISLLQNH------ 204
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
++L+VIDS+AAL ++D ++ L + IS +K++A + ++VTNQV
Sbjct: 205 VKLLVIDSMAALVTGEYDQ---GPTRQHSLGWHIS-FVKSVAEFSRIPIVVTNQVRSQSH 260
Query: 200 PNEGVNGLRVGNLGCLYSS----GRPICPALGIAWANCVNSRLFL 240
+V + G + ALGI WA+ V RL L
Sbjct: 261 DGTSQYSFQVESRGETVDDHTRFDSHLVAALGIHWAHAVTIRLVL 305
>gi|308806876|ref|XP_003080749.1| DNA repair protein RAD51/RHP55 (ISS) [Ostreococcus tauri]
gi|116059210|emb|CAL54917.1| DNA repair protein RAD51/RHP55 (ISS) [Ostreococcus tauri]
Length = 420
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 51/280 (18%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T GC +D L GGI S+TE+ E +GKTQ L ++ QLP GG LY+ T
Sbjct: 184 TTGCAKVDEMLQGGIESGSVTEIYGEFRTGKTQLMHTLAVTCQLPIEQGGGEGKCLYIDT 243
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
E F +RL Q++ F+ D P D + H+ + +++ + +
Sbjct: 244 EGTFRPQRLIQIAERFQ--MDPGPVLDNVAYAKAHNTEHQTELLVAAAGMMAETR----- 296
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
L++IDS+ L+R++++ +L R K L +A FG+AV+V+NQVV E
Sbjct: 297 FALMIIDSVTNLYRTEYEGR-GELSARQMHLGKFLRQLARLADEFGVAVIVSNQVVANPE 355
Query: 200 --PNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGG 257
P G N L+ P G A+ +RL L +
Sbjct: 356 GGPFAGANALK---------------PIGGNIMAHASTTRLALRKG-------------- 386
Query: 258 VGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
R R + +V +P L ++ +F I +G+
Sbjct: 387 -----------RGENRVMKIVCSPMLPESEAQFSIGEDGI 415
>gi|355570859|ref|ZP_09042129.1| DNA repair and recombination protein radA [Methanolinea tarda
NOBI-1]
gi|354826141|gb|EHF10357.1| DNA repair and recombination protein radA [Methanolinea tarda
NOBI-1]
Length = 323
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 5/159 (3%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G T +++ + K + P +D LGGG+ +ITEL E GSGK+Q Q +
Sbjct: 65 LGGFRTGKDVFEQRKEVRKLKMRVPELDALLGGGLETQAITELYGEFGSGKSQVAHQAAV 124
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDY---IFVQSVHSVD 117
+ QLP GGL S++++ TE F R+ Q+ D +P ++ I V H+ D
Sbjct: 125 NVQLPEEEGGLMGSAIFIDTENTFRPERIEQM--VLGLGIDADPEEFLENIHVARAHTSD 182
Query: 118 QLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDF 156
+ +M + +S P+RLI+IDS+ A FR+++
Sbjct: 183 HQMLMMDSAREKAQELKDSERPVRLIIIDSLTAHFRAEY 221
>gi|219850727|ref|YP_002465159.1| DNA repair and recombination protein RadA [Methanosphaerula
palustris E1-9c]
gi|219544986|gb|ACL15436.1| DNA repair and recombination protein RadA [Methanosphaerula
palustris E1-9c]
Length = 327
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 19/229 (8%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G T Q++ + K P D LGGG+ +ITE+ E GSGK+Q Q+ +
Sbjct: 65 IGGFKTGQDVFEQRKNVRKLKTFVPDFDELLGGGVETQAITEVYGEFGSGKSQIVHQMAV 124
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPC-----DYIFVQSVHS 115
+AQLP S GGL+ S++Y+ TE F R+ Q+ P + I V H+
Sbjct: 125 NAQLPESVGGLNGSAIYIDTENTFRPERIEQMVAGLDFPELELPSFEEFLNNIHVARAHT 184
Query: 116 VDQ---LLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDF------DNTMDDLKKR 166
D L+D ++ + +KNS + P+++ +IDS+ A FR+++ L +
Sbjct: 185 SDHQMLLIDTARELAAELKNSDH---PVKIFIIDSLTAHFRAEYAGRGTLATRQQKLNRH 241
Query: 167 SFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCL 215
FFK+ + + AVG +++N V +P + + G VG+
Sbjct: 242 MHEFFKL--IDEHNAVGLVTNQVMSNPAVFFGDPTKPIGGNIVGHTATF 288
>gi|160331524|ref|XP_001712469.1| rad51 [Hemiselmis andersenii]
gi|159765917|gb|ABW98144.1| rad51 [Hemiselmis andersenii]
Length = 328
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 125/277 (45%), Gaps = 45/277 (16%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GGI SITEL+ E +GKTQ C + +SAQL GG +++L T
Sbjct: 92 TTGSQELDKILRGGIETGSITELIGEYRTGKTQLCHNIAVSAQLSYDQGGGEGRAIFLDT 151
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R+ ++ F+ N + + I + ++VDQ L+I+ + S + +
Sbjct: 152 EGTFRPERIVDIAGRFKL-NSLDVLENIALTRAYNVDQQLEILNSVGSMM-----VKYKF 205
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
++++DSI AL+R++F +L R + L+ + F +AVL+TNQVV ++
Sbjct: 206 AVLIVDSIIALYRAEFIG-RGELSARQQHLGRFIKQLQRLCDEFNIAVLITNQVVAQVD- 263
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGG 260
GC P G A+ +RLFL + + VN G
Sbjct: 264 ------------GCNSFVQDPKKACGGNIIAHASQTRLFLKKQKG--------VNRGC-- 301
Query: 261 SGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
++H +P+L +C F IT G+
Sbjct: 302 -------------TIH--DSPNLPPATCTFSITSSGI 323
>gi|157112162|ref|XP_001657421.1| DNA repair protein rad51 [Aedes aegypti]
gi|108878168|gb|EAT42393.1| AAEL006080-PA [Aedes aegypti]
Length = 341
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 7/177 (3%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ LGGGI SITEL E +GKTQ C L ++ QLP S G LY+
Sbjct: 103 QLTTGSKELDKLLGGGIETGSITELFGEFRTGKTQICHTLAVTCQLPVSQNGGEGKCLYI 162
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ ++ + ++ ++ +S D + ++ + + + S +
Sbjct: 163 DTEGTFRPERLLAVAERYKLVGTDVLDNVVYARAFNS-DHQMKLLVQASAMMVESRYA-- 219
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS ALFR+D+ +L R K ML +A FG+AV++TNQVV
Sbjct: 220 ---LLIVDSATALFRTDYSG-RGELNARQVQLGKFLRMLLRLADEFGVAVVITNQVV 272
>gi|19310403|gb|AAL84941.1| At2g45280/F4L23.21 [Arabidopsis thaliana]
Length = 363
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 46/257 (17%)
Query: 9 NLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSH 68
++L + + T C +D LGGGI C +TE+ G GKTQ +QL+++ Q+P
Sbjct: 94 DMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPREC 153
Query: 69 GGLSASSLYLHTEFPFPMRRLHQLS--------------HTFRPSND-----HNPCDYIF 109
GGL ++Y+ TE F + R Q++ H +N + + IF
Sbjct: 154 GGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIF 213
Query: 110 VQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFL 169
V S + + ++ +E FI + + ++++++DSI FR D+ DDL +R+ +
Sbjct: 214 YFRVCSYTEQIALVSHLEKFISENKD----VKVVIVDSITFHFRQDY----DDLAQRTRV 265
Query: 170 FFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGR-PICPALGI 228
+++ +A F LAV++ NQV +S G + ALG
Sbjct: 266 LSEMALKFMKLAKKFSLAVVLLNQVT------------------TKFSEGSFQLALALGD 307
Query: 229 AWANCVNSRLFLSRNED 245
+W++ +R+ L N D
Sbjct: 308 SWSHSCTNRVILYWNGD 324
>gi|110742988|dbj|BAE99388.1| RAD51 homolog [Arabidopsis thaliana]
Length = 342
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 123/279 (44%), Gaps = 45/279 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITEL E SGKTQ C L ++ QLP GG ++Y+
Sbjct: 104 QITSGSRELDKVLEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKAMYI 163
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F N + + + ++ D ++ + S + + +
Sbjct: 164 GAEGTFRPQRLLQIADRF-GLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFA-- 220
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV +
Sbjct: 221 ---LLIVDSATALYRTDFSG-RGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQV 276
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G +G P G A+ +RL L +
Sbjct: 277 D-------------GSALFAGPQFKPIGGNIMAHATTTRLALRKGR-------------- 309
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+E+ +C+ V+ +P L + F+I+ EGV
Sbjct: 310 ----AEERICK-------VISSPCLPEAEARFQISTEGV 337
>gi|162605684|ref|XP_001713357.1| DNA repair protein Rad51 homolog [Guillardia theta]
gi|13794289|gb|AAK39666.1|AF083031_23 DNA repair protein Rad51 homolog [Guillardia theta]
Length = 331
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 95/181 (52%), Gaps = 7/181 (3%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ LGGGI SITE+ E +GKTQ C L ++ QL S GG +LY+ T
Sbjct: 95 TSGSKELDKILGGGIETGSITEVFGEFRTGKTQLCHTLCVTCQLSVSKGGGEGRALYIDT 154
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R+ ++ F N + D I ++ D L+++ + + + S SR
Sbjct: 155 EGTFRPERIVSIADRFNL-NRQDVLDNIAYARAYNTDHQLELLNQASALM---SESRYA- 209
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+VIDS +L+R+D+ +L R + L+ +A FG+AVL+TNQV+ ++
Sbjct: 210 -LLVIDSATSLYRTDYTG-RGELASRQQHMARFLRSLQRLADEFGVAVLITNQVIAQVDG 267
Query: 201 N 201
N
Sbjct: 268 N 268
>gi|383863171|ref|XP_003707056.1| PREDICTED: DNA repair protein XRCC3-like [Megachile rotundata]
Length = 257
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 110/232 (47%), Gaps = 39/232 (16%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T GC +D L GGI IT++ + +GKTQ LQL L+ QLP GG +A ++Y+ T
Sbjct: 22 TTGCSKLDALLEGGITTRGITQIYGAASTGKTQLALQLCLTVQLPEVKGGFAAGAVYICT 81
Query: 81 EFPFPMRRLHQLSHTFRPSNDHN-PCDYIFVQSVHSVDQ----LLDIMPKIESFIKNSSN 135
E FP RRL +L + + D +FV+ V + D+ LL +P + S K
Sbjct: 82 ESIFPSRRLQELIQKLDATKKYGINGDLVFVEHVSTTDELETCLLHRIPILMSAKK---- 137
Query: 136 SRLPIRLIVIDSIAALFR-----SDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLV 190
I LI+IDSIAA +R S+F+N L+ ++S + ++
Sbjct: 138 ----IGLIIIDSIAAPYRVEDWNSEFNNRPKSLRTIGQQLHELS--------KHNICIIC 185
Query: 191 TNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
NQV ++ N L N+ S R PALG W++ + + ++ R
Sbjct: 186 INQVTAVIH-----NNLLDDNV-----SER---PALGTTWSSMITNSIYFYR 224
>gi|198451235|ref|XP_001358289.2| GA15983 [Drosophila pseudoobscura pseudoobscura]
gi|198131396|gb|EAL27427.2| GA15983 [Drosophila pseudoobscura pseudoobscura]
Length = 254
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 112/232 (48%), Gaps = 28/232 (12%)
Query: 17 TEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSL 76
++K G +DR LGGGI ITELV SG+GKT+ CLQL L+ Q+P + GGL ++L
Sbjct: 27 SKKIATGHKSLDRHLGGGISLRQITELVGNSGTGKTKMCLQLCLNVQIPKTAGGLEGAAL 86
Query: 77 YLHTEFPFPMRRLHQLSHTFRPSNDHNPCDY---IFVQSVHSVD--QLLDIMPKIESFIK 131
++ T F RL +L+ D+ +Q+VH V + +M + S +
Sbjct: 87 FIDTRQDFHPDRLQELARDLEKEYKQRAPDFQASKMLQNVHYVSCPNAVQLMATVLSSYR 146
Query: 132 NSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVT 191
+ + I++IVIDS+A R +DD +R L ++ ++ + +A +VT
Sbjct: 147 HLI-AHPNIKVIVIDSLAFSLR-----MLDDGAQRFELLLELVESMRQLLREHEVAWVVT 200
Query: 192 NQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRN 243
N V C+ + PALG +++ +N R++ SRN
Sbjct: 201 N----------------VLTHRCI-GDQFHVVPALGEMYSHLINERIWFSRN 235
>gi|32250967|gb|AAP74362.1| DNA repair protein Rad51 [Ogataea angusta]
Length = 369
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI +ITE+ E +GK+Q C L ++ QLP +GG LY+ T
Sbjct: 125 TTGSKQLDTLLGGGIETGAITEVFGEFRTGKSQLCHTLAVTCQLPIDNGGGEGKCLYIDT 184
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F +++ D + ++ D L ++ + S + S S
Sbjct: 185 EGTFRPIRLVAIARRF-GLDENETLDNVAYARAYNADHQLQLLHQAASMMTESRFS---- 239
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DSI AL+R+D+ +L R K L+ +A FG+AV++TNQVV
Sbjct: 240 -LLIVDSIMALYRTDYSG-RGELSARQMHVAKFMRTLQRLADEFGIAVVITNQVV 292
>gi|326435196|gb|EGD80766.1| hypothetical protein PTSG_01354 [Salpingoeca sp. ATCC 50818]
Length = 366
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 53/279 (18%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P +DR L GG+P ITE+ SG GKTQFC+ +T A + +G LYL TE F
Sbjct: 84 PTLDRNLAGGLPIGMITEVAGPSGCGKTQFCMMMTSVAAV-GVNGHEPGGVLYLDTEGSF 142
Query: 85 PMRRLHQLSHTFRP----SNDH--NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
+RL ++ P +N+ + I V + + +LL ++ ++ I +
Sbjct: 143 SNKRLVAMASQRFPVQLATNEALVDMSKRIQVITTKTSAELLRVLETLDVRIVE-----M 197
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
RL+++DS A+L R ++ + ++R + + + +LK A + + VLVTNQV
Sbjct: 198 KARLVILDSAASLLRKEYQG---NQQERRDVLAREATLLKRWAQTYAIPVLVTNQVTTRF 254
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ N+G + + ALG WA+ VN+RL +
Sbjct: 255 DDNQGGDAF--------------VTAALGNTWAHSVNTRLTV------------------ 282
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+F R L V+ +P +A +S + IT +G+
Sbjct: 283 ------NFAPSDALRFLSVIKSPLVASSSIAYRITDQGL 315
>gi|320580957|gb|EFW95179.1| DNA repair protein Rad51 [Ogataea parapolymorpha DL-1]
Length = 369
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI +ITE+ E +GK+Q C L ++ QLP +GG LY+ T
Sbjct: 125 TTGSKQLDTLLGGGIETGAITEVFGEFRTGKSQLCHTLAVTCQLPIDNGGGEGKCLYIDT 184
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F +++ D + ++ D L ++ + S + S S
Sbjct: 185 EGTFRPIRLVAIARRF-GLDENETLDNVAYARAYNADHQLQLLHQAASMMTESRFS---- 239
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DSI AL+R+D+ +L R K L+ +A FG+AV++TNQVV
Sbjct: 240 -LLIVDSIMALYRTDYSG-RGELSARQMHVAKFMRTLQRLADEFGIAVVITNQVV 292
>gi|403223956|dbj|BAM42086.1| uncharacterized protein TOT_040000462 [Theileria orientalis strain
Shintoku]
Length = 285
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 113/241 (46%), Gaps = 42/241 (17%)
Query: 23 GCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEF 82
G ID L GGI I EL SGSGKTQF L L + + LYL+T
Sbjct: 29 GISEIDEALNGGILLGKIAELYGPSGSGKTQFALSLASEILIGNLINSTDHVVLYLYTNG 88
Query: 83 PFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHS-VDQLLD----------------IMPK 125
FP++R+ ++ + +N C + H +DQLL+ + K
Sbjct: 89 TFPIQRMTEILES-----KYNDCKMLNDSPEHKGIDQLLEKLYMYKVTDNDELHYLLTSK 143
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+E +K L ++L++IDSIA +FR++ + + S + KI+ +LK +A +
Sbjct: 144 MEEMLK------LNVKLVIIDSIATIFRANINEGFPEPGFNSII--KIALILKRIAHEYN 195
Query: 186 LAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP-ICPALGIAWANCVNSRLFLSRNE 244
LA+L NQ GV VG + + R I P+LG +W C+NSR+ ++RN
Sbjct: 196 LAILAINQA-------SGV----VGQNNIPFLNPRASIKPSLGDSWERCINSRILVARNR 244
Query: 245 D 245
+
Sbjct: 245 N 245
>gi|18406752|ref|NP_566040.1| DNA repair protein RAD51-like 3 [Arabidopsis thaliana]
gi|55583940|sp|Q8GXF0.2|RA51C_ARATH RecName: Full=DNA repair protein RAD51 homolog 3; AltName: Full=DNA
repair-recombination protein RAD51C; Short=AtRAD51C
gi|11064475|emb|CAC14294.1| Rad51C protein [Arabidopsis thaliana]
gi|15425731|dbj|BAB64343.1| AtRAD51Calpha [Arabidopsis thaliana]
gi|20196911|gb|AAB82635.2| putative RAD51C-like DNA repair protein [Arabidopsis thaliana]
gi|330255439|gb|AEC10533.1| DNA repair protein RAD51-like 3 [Arabidopsis thaliana]
Length = 363
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 46/257 (17%)
Query: 9 NLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSH 68
++L + + T C +D LGGGI C +TE+ G GKTQ +QL+++ Q+P
Sbjct: 94 DMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPREC 153
Query: 69 GGLSASSLYLHTEFPFPMRRLHQLS--------------HTFRPSND-----HNPCDYIF 109
GGL ++Y+ TE F + R Q++ H +N + + IF
Sbjct: 154 GGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIF 213
Query: 110 VQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFL 169
V S + + ++ +E FI + + ++++++DSI FR D+ DDL +R+ +
Sbjct: 214 YFRVCSYTEQIALVNHLEKFISENKD----VKVVIVDSITFHFRQDY----DDLAQRTRV 265
Query: 170 FFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGR-PICPALGI 228
+++ +A F LAV++ NQV +S G + ALG
Sbjct: 266 LSEMALKFMKLAKKFSLAVVLLNQVT------------------TKFSEGSFQLALALGD 307
Query: 229 AWANCVNSRLFLSRNED 245
+W++ +R+ L N D
Sbjct: 308 SWSHSCTNRVILYWNGD 324
>gi|384494865|gb|EIE85356.1| DNA repair protein RAD51 [Rhizopus delemar RA 99-880]
Length = 333
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 128/279 (45%), Gaps = 48/279 (17%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +DR LGGGI SITE+ E +GK+Q C L+++AQLP GG L++ T
Sbjct: 96 TTGSKELDRLLGGGIETGSITEIFGEFRTGKSQLCHMLSVTAQLPLDMGGAQGKCLFIDT 155
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R+ ++ + + + D I ++ D ++ + + + + +R +
Sbjct: 156 ENTFRPNRILSIAQRY-SLDGQDTLDNIAYARAYNTDHQTTLLIQAAAMM---AETRFAV 211
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
+++DS AL+R+D+ +L R + L+ +A FG+AV++TNQVV
Sbjct: 212 --LIVDSAMALYRTDYAG-RGELAARQIHLAQFLRQLQRLADEFGVAVVITNQVV----- 263
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALG--IAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
V+G G + P PA G IA A+C +RL+L +
Sbjct: 264 -AQVDG------GASMFNPDPKKPAGGNIIAHASC--TRLYLKK---------------- 298
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
G G E +C+ V +P L + C F I EG+
Sbjct: 299 -GRG-ETRICK-------VYDSPSLPENECVFAIHEEGI 328
>gi|170035198|ref|XP_001845458.1| DNA repair protein RAD51 [Culex quinquefasciatus]
gi|167877010|gb|EDS40393.1| DNA repair protein RAD51 [Culex quinquefasciatus]
Length = 349
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ LGGGI SITEL E +GKTQ C L ++ QLP S G LY+
Sbjct: 111 QLTTGSKELDKLLGGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPVSQNGGEGKCLYI 170
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ ++ + D + ++ D + ++ + + + S +
Sbjct: 171 DTEGTFRPERLLAVADRYKLVGS-DVLDNVAYARAYNSDHQMQLLVQASAMMAESRYA-- 227
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS ALFR+D+ +L R K ML +A FG+AV++TNQVV
Sbjct: 228 ---LLIVDSATALFRTDYAG-RGELNARQVNLGKFLRMLLRLADEFGVAVIITNQVV 280
>gi|26451592|dbj|BAC42893.1| putative f4l23 RAD51Calpha DNA repair-recombination factor
[Arabidopsis thaliana]
Length = 342
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 46/257 (17%)
Query: 9 NLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSH 68
++L + + T C +D LGGGI C +TE+ G GKTQ +QL+++ Q+P
Sbjct: 73 DMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPREC 132
Query: 69 GGLSASSLYLHTEFPFPMRRLHQLS--------------HTFRPSND-----HNPCDYIF 109
GGL ++Y+ TE F + R Q++ H +N + + IF
Sbjct: 133 GGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIF 192
Query: 110 VQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFL 169
V S + + ++ +E FI + + ++++++DSI FR D+ DDL +R+ +
Sbjct: 193 YFRVCSYTEQIALVNHLEKFISENKD----VKVVIVDSITFHFRQDY----DDLAQRTRV 244
Query: 170 FFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGR-PICPALGI 228
+++ +A F LAV++ NQV +S G + ALG
Sbjct: 245 LSEMALKFMKLAKKFSLAVVLLNQVT------------------TKFSEGSFQLALALGD 286
Query: 229 AWANCVNSRLFLSRNED 245
+W++ +R+ L N D
Sbjct: 287 SWSHSCTNRVILYWNGD 303
>gi|432328525|ref|YP_007246669.1| DNA repair and recombination protein RadA [Aciduliprofundum sp.
MAR08-339]
gi|432135234|gb|AGB04503.1| DNA repair and recombination protein RadA [Aciduliprofundum sp.
MAR08-339]
Length = 330
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 119/283 (42%), Gaps = 56/283 (19%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G P DR LGGG+ +ITE E GSGKTQ QL ++ QLP+ GGL ++Y+
Sbjct: 97 KLTTGSPEFDRLLGGGLETQAITEFFGEFGSGKTQIMHQLAVNVQLPADKGGLEGHAIYI 156
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYI----FVQSVHSVDQLLDIMPKIESFIKNSS 134
TE F R+ Q++ +P D + ++ +S Q+L + +E
Sbjct: 157 DTENTFRPERIKQMAEAL----GLDPIDSLKKIHVARAFNSNHQILLVDKAME------L 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
P+RL+++DS+ A FR+++ +++ L + +LK + + V VTNQV
Sbjct: 207 AKEYPVRLLIVDSLTAHFRAEYVGRGSLAERQQLLNKHMHDLLKFADLNNAV-VAVTNQV 265
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
N G ++ G P P G + R++L +
Sbjct: 266 --------------AANPGMMF--GDPTQPIGGHIVGHTATYRIYLRK------------ 297
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
R +R ++ +P L D +I EG+
Sbjct: 298 -------------SRGNKRVARLIDSPALPDGEVVIKIVEEGI 327
>gi|330040667|ref|XP_003239988.1| DNA repair protein Rad51 [Cryptomonas paramecium]
gi|327206914|gb|AEA39090.1| DNA repair protein Rad51 [Cryptomonas paramecium]
Length = 331
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 20/224 (8%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G IDR L GGI SITEL E +GKTQ C L ++ QL GG LY+ T
Sbjct: 95 TTGSREIDRILKGGIETGSITELFGEFRTGKTQICHTLCVTCQLSIDQGGGEGRVLYIDT 154
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R+ +++ F N + D I ++ D +++ + + + +
Sbjct: 155 EGTFRPERIVAIANRFNL-NQQDVLDNIAFARAYNTDHQTELLNQACGMMAENRYA---- 209
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
++++DS AL+R+D+ +L R K L+ +A FG+A+++TNQV+ +E
Sbjct: 210 -MLIVDSATALYRTDYTG-RGELAPRQQHMAKFLRRLQRLADEFGIAIVITNQVIAKVE- 266
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
G + C+ S +P+ G A+ +RL+L +N+
Sbjct: 267 ---------GGVYCIPDSKKPVG---GNVIAHASQTRLYLKKNK 298
>gi|147920562|ref|YP_685641.1| DNA repair and recombination protein RadA [Methanocella arvoryzae
MRE50]
gi|110621037|emb|CAJ36315.1| DNA repair/recombination protein A [Methanocella arvoryzae MRE50]
Length = 323
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K C +D LGGG+ SITE E GSGKTQ QL ++ QLP GGL S + +
Sbjct: 82 KLKTNCNSLDDLLGGGVETQSITEFYGEFGSGKTQVAHQLAVNVQLPPEQGGLGGSVVMI 141
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDY---IFVQSVHSVDQLLDIMPKIESFIKNSSN 135
TE F R+ Q+ + D +P D+ I V ++ + + ++ + +
Sbjct: 142 DTENTFRPERIAQMVKGLKGGEDLDPEDFLKNIHVARAYNSNHQILLVESASELAEKMRD 201
Query: 136 SRLPIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLKAMAVGFG----LAVL 189
S P++LI++DS+ A FRS++ T+ D +++ L + +++ FG A++
Sbjct: 202 SDRPVKLIIVDSLTAHFRSEYVGRGTLADRQQK--LNKHMHDLMR-----FGDINNAAIV 254
Query: 190 VTNQV 194
VTNQV
Sbjct: 255 VTNQV 259
>gi|255070105|ref|XP_002507134.1| Rad51 DNA recombinase 3 [Micromonas sp. RCC299]
gi|226522409|gb|ACO68392.1| Rad51 DNA recombinase 3 [Micromonas sp. RCC299]
Length = 362
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 109/240 (45%), Gaps = 45/240 (18%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGG+ ITEL G GKTQ C+QL +S Q+P + GG S++Y+ TE F
Sbjct: 108 LDDLLGGGVAVGEITELCGCPGIGKTQACMQLCVSVQMPGAFGGYEGSAVYIDTEGSFMA 167
Query: 87 RRLHQLSHT----------FRPSN-----------DHNPCDYIFVQSVHSVDQLLDIMPK 125
R +++ F P + + D + + H + +LL ++
Sbjct: 168 ERAKEVAQATVSHLVSISQFLPKHLSESGALSQFTVNEILDRVHLFRCHEITELLAVVES 227
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ +++ ++L+VIDS+A FR DF D+ R+ + K++ L +A
Sbjct: 228 LPMYVRAHG-----VKLVVIDSMAFHFRQDF----KDMALRTAILAKMTTQLLNLAKSEH 278
Query: 186 LAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
LAV+ NQ+ +P GV L PALG ++A+ +R+ LS D
Sbjct: 279 LAVVSVNQITVKPDPASGVARL---------------VPALGESYAHGCTTRVILSWESD 323
>gi|269986696|gb|EEZ92976.1| DNA repair and recombination protein RadA [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 345
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 15/210 (7%)
Query: 12 DNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGL 71
D + ++ + ++ LGGG+ SITE E GSGK+Q QL + QLP GGL
Sbjct: 98 DKRKSVQRISTSSEALNILLGGGVETQSITECYGEYGSGKSQLAFQLAVDVQLPLEKGGL 157
Query: 72 SASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIK 131
++++ TE F R+ QL+ + + I + +S D + ++ K+ I
Sbjct: 158 EGHAIWIDTEGTFRPSRIEQLA-AVKGLDPKQALQNIKIGRAYSSDHQVLLVDKVPELI- 215
Query: 132 NSSNSRLPIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVL 189
N+ I+LIV+DS+ ALFR+++ T+ D +++ + L+ +A F +AV
Sbjct: 216 ---NADPKIKLIVVDSMMALFRAEYVGRGTLVDRQQKVNVVLH---NLQRLADRFNVAVY 269
Query: 190 VTNQVV---DLM--EPNEGVNGLRVGNLGC 214
+TNQV+ D+M +P V G +G++
Sbjct: 270 ITNQVMARPDVMFGDPTAAVGGHIIGHVAT 299
>gi|225454007|ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera]
gi|296089196|emb|CBI38899.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 44/264 (16%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+ T ++L + + T C +D LGGGI C +TE+ G GKTQ +QL +
Sbjct: 69 VNGAQTAWDMLHEEESLKCITTSCVDLDDILGGGIKCKEVTEIGGVPGIGKTQLGIQLAV 128
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHN----------------P 104
+ Q+P ++GGL ++Y+ TE F + R Q++ N P
Sbjct: 129 NVQIPVNYGGLGGKAIYIDTEGSFMLERSLQIAEACIEDMSGNSDFLQKDFQSCQVKAQP 188
Query: 105 CDY---IFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
D+ IF V S + + ++ ++ FI + + +++IDS+ FR DF D
Sbjct: 189 KDFLQNIFYFRVCSYTEQIAMINYLDKFISEHKD----VNVVIIDSVTFHFRQDF----D 240
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL R+ L ++ L +A F LAV++ NQV + EG L +
Sbjct: 241 DLALRTRLLSGMALKLMKLAKKFSLAVVLLNQVT--TKHTEGSFQLTL------------ 286
Query: 222 ICPALGIAWANCVNSRLFLSRNED 245
ALG +W++ +R+ L N D
Sbjct: 287 ---ALGDSWSHSCTNRVILYWNGD 307
>gi|47213607|emb|CAG07273.1| unnamed protein product [Tetraodon nigroviridis]
Length = 329
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 104/232 (44%), Gaps = 42/232 (18%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGG P +TE+ G GKTQ CLQL + Q+P GGL A +Y+ TE F +
Sbjct: 90 LDAALGGGAPVGRMTEVCGVPGVGKTQLCLQLAVDVQVPHCFGGLGAQVVYVDTEGGFRL 149
Query: 87 RRLHQLS-----HTFRPSNDHNP------------CDYIFVQSVHSVDQLLDIMPKIESF 129
+RL L+ H + D +FV H +LL + + F
Sbjct: 150 QRLLDLAAAAVNHCSLLAEDQEQRVAMETFTVETILSNVFVVRCHDYLELLAELHLMPGF 209
Query: 130 IKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVL 189
+ +RL+V+DS+A+ FR +D+L +R+ L ++ L AMA +AV+
Sbjct: 210 LSAHPG----VRLLVVDSVASPFRP----LLDELSQRTRLLSGLAQQLVAMAASRDMAVV 261
Query: 190 VTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
VTNQ+ RV + + + PALG W + RL L
Sbjct: 262 VTNQMTT-----------RV------WGTHSEVVPALGDTWGHAAAIRLRLQ 296
>gi|324512204|gb|ADY45060.1| DNA repair protein RAD51 A [Ascaris suum]
Length = 346
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 88/174 (50%), Gaps = 7/174 (4%)
Query: 22 VGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTE 81
G ++R LGGGI SITE+ E +GK+Q C L + QLP GG L++ TE
Sbjct: 112 TGSRELNRLLGGGIETGSITEVFGEFRTGKSQLCHTLAVMCQLPIDMGGAEGKCLWIDTE 171
Query: 82 FPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIR 141
F RL ++ ++ S + D + ++ D + ++ + + + S +
Sbjct: 172 GTFRPERLLAVAERYKLSG-QDVLDNVVYARCYNTDHQMQLLVQASAMMAESRYA----- 225
Query: 142 LIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS ALFR+DF +L R L K L +A FG+AV++TNQVV
Sbjct: 226 LLVVDSATALFRTDFSG-RGELAARQMLLGKFMRTLLKLADEFGVAVVITNQVV 278
>gi|334184917|ref|NP_001189749.1| DNA repair protein RAD51-like 3 [Arabidopsis thaliana]
gi|330255440|gb|AEC10534.1| DNA repair protein RAD51-like 3 [Arabidopsis thaliana]
Length = 387
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 46/257 (17%)
Query: 9 NLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSH 68
++L + + T C +D LGGGI C +TE+ G GKTQ +QL+++ Q+P
Sbjct: 118 DMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPREC 177
Query: 69 GGLSASSLYLHTEFPFPMRRLHQLS--------------HTFRPSND-----HNPCDYIF 109
GGL ++Y+ TE F + R Q++ H +N + + IF
Sbjct: 178 GGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIF 237
Query: 110 VQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFL 169
V S + + ++ +E FI + + ++++++DSI FR D+ DDL +R+ +
Sbjct: 238 YFRVCSYTEQIALVNHLEKFISENKD----VKVVIVDSITFHFRQDY----DDLAQRTRV 289
Query: 170 FFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGR-PICPALGI 228
+++ +A F LAV++ NQV +S G + ALG
Sbjct: 290 LSEMALKFMKLAKKFSLAVVLLNQVT------------------TKFSEGSFQLALALGD 331
Query: 229 AWANCVNSRLFLSRNED 245
+W++ +R+ L N D
Sbjct: 332 SWSHSCTNRVILYWNGD 348
>gi|308809359|ref|XP_003081989.1| Meiotic recombination protein DMC1, putative (ISS) [Ostreococcus
tauri]
gi|116060456|emb|CAL55792.1| Meiotic recombination protein DMC1, putative (ISS) [Ostreococcus
tauri]
Length = 371
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 45/281 (16%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GG +ITE+ E GKTQ C L ++ Q+P GG + ++ T
Sbjct: 136 TCGAAAVDAILNGGFETRAITEIFGEWRCGKTQICHTLAVTTQMPIEMGGGCSKVAWIDT 195
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F D + V V +VDQ++ + I + + P
Sbjct: 196 ENTFRSDRLEAIADRFGLDRDA-VLSNVMVARVDTVDQMMQALIAI-----GAKMAEEPF 249
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
+L+++DSI A+FR D+ +L +R + L+ +A F +AV++TNQV +
Sbjct: 250 KLLIVDSIMAIFRVDY-VARGELSERQQTLNQFLSRLRKLAEEFNVAVVLTNQV----QS 304
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGG 260
+ G G ++ P P G A+ RL + +
Sbjct: 305 DPG---------GMAFAGVEPKKPIGGHVLAHASTIRLQVRKG----------------- 338
Query: 261 SGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
R R + V+ P L + EF+IT GV G+E
Sbjct: 339 --------RAEARVIKVLQGPTLKEDEAEFQITEGGVAGME 371
>gi|350537569|ref|NP_001233788.1| DNA repair protein RAD51 homolog [Solanum lycopersicum]
gi|2500107|sp|Q40134.1|RAD51_SOLLC RecName: Full=DNA repair protein RAD51 homolog
gi|1143810|gb|AAC23700.1| LeRAD51 [Solanum lycopersicum]
Length = 342
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 45/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E GKTQ C L ++ QLP GG ++Y+
Sbjct: 104 QITSGSKELDKILEGGIETGSITEIYGEFRCGKTQLCHTLCVTCQLPLDQGGGEGKAMYI 163
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ + N + + + ++ D ++ + S + + +
Sbjct: 164 DAEGTFRPQRLLQIADRY-GLNGPDVLENVAYARAYNTDHQSRLLLEAASMMVETRFA-- 220
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV +
Sbjct: 221 ---LMIVDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQV 276
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G +G I P G A+ +RL L +
Sbjct: 277 D-------------GSAVFAGPQIKPIGGNIMAHASTTRLALRKGR-------------- 309
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+E+ +C+ VV +P LA+ F+I+ EGV V+
Sbjct: 310 ----AEERICK-------VVSSPCLAEAEARFQISVEGVTDVK 341
>gi|288931813|ref|YP_003435873.1| DNA repair and recombination protein RadA [Ferroglobus placidus DSM
10642]
gi|288894061|gb|ADC65598.1| DNA repair and recombination protein RadA [Ferroglobus placidus DSM
10642]
Length = 340
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 128/284 (45%), Gaps = 53/284 (18%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G +D LGGG+ +ITEL E GSGKTQ C QL ++ QLP GGL+ + +
Sbjct: 102 KITTGSKALDDLLGGGVETQAITELFGEFGSGKTQICHQLAVNVQLPKEKGGLNGVVVVI 161
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNP---CDYIFVQSVHSVDQLLDIMPKIESFIKNSSN 135
TE F R+ Q++ + D +P + I+V ++ + + ++ +
Sbjct: 162 DTEGTFRPERIVQMA----KAKDLDPDVALENIYVAQAYNSNHQMLLVDNAKELANKLRK 217
Query: 136 SRLPIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQ 193
+RL+V+DS+ A FR+++ T+ D +++ L + +L+ + F A++VTNQ
Sbjct: 218 EGKHVRLLVVDSLTAHFRAEYIGRGTLADRQQK--LNRHLHDLLRFGEL-FNAAIVVTNQ 274
Query: 194 VVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQM 253
V + +P++ G P P G A+ R++L +
Sbjct: 275 V--MAKPDQFF--------------GDPTKPVGGHIVAHTATFRVYLRK----------- 307
Query: 254 VNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
S E V R ++ +PHL + F+IT G+
Sbjct: 308 -------SKGELRVAR-------LIDSPHLPEAEAVFKITERGI 337
>gi|156937796|ref|YP_001435592.1| DNA repair and recombination protein RadA [Ignicoccus hospitalis
KIN4/I]
gi|166218760|sp|A8AB83.1|RADA_IGNH4 RecName: Full=DNA repair and recombination protein RadA
gi|156566780|gb|ABU82185.1| DNA repair and recombination protein RadA [Ignicoccus hospitalis
KIN4/I]
Length = 327
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 106/204 (51%), Gaps = 29/204 (14%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLS-----A 73
K T G +D LGGGI +ITE E GSGK+Q C Q +++ QLP GGLS A
Sbjct: 87 KITTGSKNLDDLLGGGIETKTITEFFGEFGSGKSQLCHQASVNVQLPLEQGGLSEGDKVA 146
Query: 74 SSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHS------VDQLLDIMPKIE 127
++Y+ TE F R+ Q++ D + ++++V+S V++L +++PK
Sbjct: 147 KAVYVDTEGTFRWERIEQMAKCLGLDPDQVMDNIYYIRAVNSDHQMAIVEELFNLVPK-- 204
Query: 128 SFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLA 187
+N ++LIV+DS+ + FR+++ ++L R K L +A + A
Sbjct: 205 ---EN-------VKLIVVDSVTSHFRAEYPGR-ENLAVRQQKLNKHLHQLGKLAEVYNTA 253
Query: 188 VLVTNQVV---DLM--EPNEGVNG 206
V++TNQV+ D+ +P + V G
Sbjct: 254 VIITNQVMARPDVFYGDPTQAVGG 277
>gi|345805658|ref|XP_537695.3| PREDICTED: DNA repair protein RAD51 homolog 3 isoform 1 [Canis
lupus familiaris]
Length = 337
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 112/263 (42%), Gaps = 45/263 (17%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGGIP TE+ G GKTQ C+QL +
Sbjct: 73 GKKCTALELLEQEHTQSFIITFCSALDNILGGGIPLTKTTEICGVPGVGKTQLCMQLAVD 132
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDH-------------- 102
Q+P GG+ ++++ TE F + R+ L+ H + H
Sbjct: 133 VQIPECFGGVEGEAVFIDTEGSFMVDRVVDLATACIQHLHLIAGRHMGEEHSKALEDFTL 192
Query: 103 -NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
N +I+ +LL + + F+ S +RL+++D IA FR D +D
Sbjct: 193 ENILSHIYYFRCRDYTELLAQVYLLPDFLSEHSK----VRLVIVDGIAFPFRHD----LD 244
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL R+ L ++ + ++A LAVL+TNQ+ ++ N+ +
Sbjct: 245 DLSLRTRLLNGLAQQMISLANNHRLAVLLTNQMTTKIDRNQAL----------------- 287
Query: 222 ICPALGIAWANCVNSRLFLSRNE 244
+ PALG +W + RL ++
Sbjct: 288 LVPALGESWGHAATIRLIFHWDQ 310
>gi|449018929|dbj|BAM82331.1| DNA repair protein RAD51 [Cyanidioschyzon merolae strain 10D]
Length = 347
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 91/175 (52%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITEL E +GK+Q C L ++ Q+P + GG +LY+ T
Sbjct: 113 TTGSKELDALLQGGIETGSITELFGEFRTGKSQLCHTLCVTCQMPVAEGGAEGKALYIDT 172
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R+ Q++ F+ + + D + ++ D ++++ + + S +
Sbjct: 173 EGTFRPERIVQIAERFQ-LDPQDVLDNVAFARAYNTDHQMELLMQAAGLMSESRYA---- 227
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS AL+R+D+ +L R + L+ +A FG+AV++TNQVV
Sbjct: 228 -LVVVDSATALYRTDYSG-RGELAARQQHMARFLRALQRLADEFGVAVVITNQVV 280
>gi|145353002|ref|XP_001420821.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581056|gb|ABO99114.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 358
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 108/246 (43%), Gaps = 48/246 (19%)
Query: 24 CPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFP 83
C +D LGGG ITEL G GKTQ +QL++SAQ P + GGL ++Y+ TE
Sbjct: 100 CEALDDALGGGAASGEITELCGCPGIGKTQMAMQLSVSAQTPRAFGGLGGEAVYVDTEGS 159
Query: 84 FPMRRLHQLS-----HTFRPSNDHNPCDY-------------------IFVQSVHSVDQL 119
F R ++ H R + D I + H V +L
Sbjct: 160 FTAERAMDMAEALAEHLGRCAKRCEDEDARREMEAALETCAPEAMLRGIHLFRCHEVTEL 219
Query: 120 LDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKA 179
L + + FI R +RL+VIDS+A FR DF D+ R+ + K++ L +
Sbjct: 220 LAALETLGEFIAE----RPKVRLVVIDSVAFHFRQDF----QDMALRTTILSKMTNRLMS 271
Query: 180 MAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLF 239
+A +AV+ NQV V R G S R + PALG ++A+ +R+
Sbjct: 272 IATTQQVAVVTVNQVT--------VKPQRDG-------SAR-LVPALGESYAHACTTRVI 315
Query: 240 LSRNED 245
LS D
Sbjct: 316 LSWEND 321
>gi|11994717|dbj|BAB03033.1| AtDMC1 (meiotic recombination protein)-like protein [Arabidopsis
thaliana]
Length = 332
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 52/296 (17%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT + L + K T GC +D LGGGI ++ITE E SGKTQ L ++ QL
Sbjct: 81 MTGSDALIKRKSVVKITTGCQALDDLLGGGIETSAITEAFGEFRSGKTQLAHTLCVTTQL 140
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P++ G + Y+ TE F R+ ++ F + I+ ++ H + LL
Sbjct: 141 PTNMKGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLG 200
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ S P R++++DSI ALFR DF + ++ L +S ++K +A
Sbjct: 201 LAAKM---------SEEPFRILIVDSIIALFRVDFTGRGELADRQQKLAQMLSRLIK-IA 250
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F +AV +TNQV+ +P G ++ S P PA G A+ RL
Sbjct: 251 EEFNVAVYMTNQVI--ADPG-----------GGMFIS-DPKKPAGGHVLAHAATIRLLFR 296
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ + + VC+ V AP+LA+ F+IT+ G+
Sbjct: 297 KGK------------------GDTRVCK-------VYDAPNLAEAEASFQITQGGI 327
>gi|384490394|gb|EIE81616.1| DNA repair protein RAD51 [Rhizopus delemar RA 99-880]
Length = 334
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 127/279 (45%), Gaps = 48/279 (17%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGG+ SITE+ E +GK+QFC + ++AQLP GG L++ T
Sbjct: 97 TTGSKALDGLLGGGVETGSITEIFGEFRTGKSQFCHTMAVTAQLPLEMGGAQGKCLFIDT 156
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R+ ++ + N + D I ++ DQ ++ + + + +
Sbjct: 157 ENSFRPNRILSIAQRY-SLNGPDTLDNIAYARAYNTDQQTSLLVQAAAMMAETR-----F 210
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+++DS AL+R+D+ +L R + L+ +A FG+AV++TNQVV
Sbjct: 211 ALLIVDSAIALYRTDYVG-RGELAARQNHLAQFLRRLQRLADEFGVAVIITNQVV----- 264
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALG--IAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+V N +++ P PA G IA A+C +RL+ +
Sbjct: 265 ------AQVDNSVSMFNPD-PKKPAGGNIIAHASC--TRLYFKK---------------- 299
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
G G E +C+ V +P L +T C F I EG+
Sbjct: 300 -GRG-ETRICK-------VYDSPSLPETDCVFAIHEEGI 329
>gi|67594825|ref|XP_665902.1| Rad51 [Cryptosporidium hominis TU502]
gi|54656768|gb|EAL35671.1| Rad51 [Cryptosporidium hominis]
Length = 347
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G +DR L GGI SITE+ E +GKTQ C L ++ QLP H G L++
Sbjct: 107 KFTTGSSQLDRLLQGGIETGSITEIFGEFRTGKTQLCHTLAVTCQLPVEHKGGEGKCLWI 166
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ F N + D I + + +D++ +S + + SR
Sbjct: 167 DTEGTFRPERIVQIADRFNL-NASDCLDNIAYARGFNTEHQMDLL---QSAVAMMTESRF 222
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+RS++ N +L R + L+ +A FG+AV++TNQV+
Sbjct: 223 A--LMIVDSATALYRSEY-NGRGELATRQSHLGQFLRALQKIADTFGVAVVITNQVMS-- 277
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+V + ++ + + P G A+ +RLFL +
Sbjct: 278 ---------KVDAMAAMFQNDK--VPIGGNIIAHASQTRLFLKK 310
>gi|66357650|ref|XP_626003.1| Rad51 [Cryptosporidium parvum Iowa II]
gi|46227223|gb|EAK88173.1| Rad51 [Cryptosporidium parvum Iowa II]
Length = 347
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G +DR L GGI SITE+ E +GKTQ C L ++ QLP H G L++
Sbjct: 107 KFTTGSSQLDRLLQGGIETGSITEIFGEFRTGKTQLCHTLAVTCQLPVEHKGGEGKCLWI 166
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ F N + D I + + +D++ +S + + SR
Sbjct: 167 DTEGTFRPERIVQIADRFNL-NASDCLDNIAYARGFNTEHQMDLL---QSAVAMMTESRF 222
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+RS++ N +L R + L+ +A FG+AV++TNQV+
Sbjct: 223 A--LMIVDSATALYRSEY-NGRGELATRQSHLGQFLRALQKIADTFGVAVVITNQVMS-- 277
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+V + ++ + + P G A+ +RLFL +
Sbjct: 278 ---------KVDAMAAMFQNDK--VPIGGNIIAHASQTRLFLKK 310
>gi|226494109|ref|NP_001150457.1| DNA repair protein RAD51 [Zea mays]
gi|195639406|gb|ACG39171.1| DNA repair protein RAD51 [Zea mays]
gi|224030343|gb|ACN34247.1| unknown [Zea mays]
gi|414881531|tpg|DAA58662.1| TPA: DNA repair protein RAD51 [Zea mays]
Length = 294
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 44/254 (17%)
Query: 9 NLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSH 68
++ + L+ + T G ++ LGGGI C +TE+ G GKTQ +QL ++ Q+P
Sbjct: 24 DMFSDELSQKHITTGSGDLNDILGGGIHCKEVTEIGGVPGVGKTQLGIQLAINVQIPVEC 83
Query: 69 GGLSASSLYLHTEFPFPMRRLHQLSHT-FRPSNDHNPCDY------------------IF 109
GGL ++Y+ TE F + R++Q++ R +H P + I+
Sbjct: 84 GGLGGKAVYIDTEGSFMVERVYQIAEGCIRDILEHFPHSHEKSSSVQKQLQPERFLADIY 143
Query: 110 VQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFL 169
+ S + + ++ +E F++ + +R+++IDS+ FR DF +DL R+ +
Sbjct: 144 YFRICSYTEQIAVINYMEKFLREHKD----VRIVIIDSVTFHFRQDF----EDLALRTRV 195
Query: 170 FFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIA 229
+S L +A + LAV++ NQV + EG L + ALG +
Sbjct: 196 LSGLSLKLMKIAKTYNLAVVLLNQVT--TKFTEGSFQLTL---------------ALGDS 238
Query: 230 WANCVNSRLFLSRN 243
W++ +RL L N
Sbjct: 239 WSHSCTNRLILHWN 252
>gi|403274804|ref|XP_003929151.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Saimiri boliviensis
boliviensis]
Length = 337
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 113/263 (42%), Gaps = 45/263 (17%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGG+P TE+ G GKTQ C+QL +
Sbjct: 73 GKKCTALELLEQEHTQGSIITFCSALDNILGGGVPLMKTTEICGAPGIGKTQLCMQLAVD 132
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDH-------------- 102
Q+P GG++ ++++ TE F + R+ L+ H + H
Sbjct: 133 VQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLHLIAEKHKGEEHRKALEDFTL 192
Query: 103 -NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
N +I+ +LL + + +F+ S +RL+++D IA FR D +D
Sbjct: 193 ENILSHIYYFRCRDYTELLAQVYLLPTFLSEHSK----VRLVIVDGIAFPFRHD----LD 244
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL R+ L ++ + ++A LAV++TNQ+ + N+ +
Sbjct: 245 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKINKNQAL----------------- 287
Query: 222 ICPALGIAWANCVNSRLFLSRNE 244
+ PALG +W + RL ++
Sbjct: 288 LIPALGESWGHAATIRLIFHWDQ 310
>gi|225717836|gb|ACO14764.1| DNA repair protein RAD51 homolog 1 [Caligus clemensi]
Length = 346
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITEL E +GK+Q C L ++ QLP HGG LY+
Sbjct: 108 QITTGSKELDKLLKGGIETGSITELFGEFRTGKSQLCHTLAVTCQLPIDHGGAEGKCLYI 167
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + + D + ++ D ++ + + + S +
Sbjct: 168 DTEGTFRPERLLAVAERYSLSGN-DVLDNVAYARAYNSDHQSQLLIQASAMMAESRYA-- 224
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
LI++DS AL+R+D+ +L R + ML +A FG+ V++TNQVV +
Sbjct: 225 ---LIIVDSSTALYRTDYSGR-GELSTRQMHLARFLRMLLRLADEFGVGVVITNQVVAQV 280
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+ +
Sbjct: 281 D-------------GAAMFAADPKKPIGGNIMAHASTTRLYFRK 311
>gi|84490269|ref|YP_448501.1| DNA repair and recombination protein RadA [Methanosphaera
stadtmanae DSM 3091]
gi|121731077|sp|Q2NE95.1|RADA_METST RecName: Full=DNA repair and recombination protein RadA
gi|84373588|gb|ABC57858.1| RadA [Methanosphaera stadtmanae DSM 3091]
Length = 311
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 6/176 (3%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D +GGGI SITE+ E GSGK+Q +L+++ QLP GGL +++
Sbjct: 78 RITTGSKGLDELIGGGIETQSITEVYGEFGSGKSQISHELSVTTQLPVEEGGLDGEVVFI 137
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ F + + ++ +S Q+L + KI I++ N
Sbjct: 138 DTENTFRPERIEQIAEGFGLNIEEVLKKIHVARAFNSSHQIL-MADKINELIQSGVN--- 193
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I+LI+IDS+ A FR+++ + L R + L+ +A + +AVL+TNQV
Sbjct: 194 -IKLIIIDSLMAHFRAEYVG-RESLATRQQKLNQHLHTLQTIANTYNVAVLITNQV 247
>gi|30686826|ref|NP_188928.2| meiotic recombination protein DMC1-like protein [Arabidopsis
thaliana]
gi|21903409|sp|Q39009.2|DMC1_ARATH RecName: Full=Meiotic recombination protein DMC1 homolog
gi|1790922|gb|AAC49617.1| AtDMC1 [Arabidopsis thaliana]
gi|66792672|gb|AAY56438.1| At3g22880 [Arabidopsis thaliana]
gi|332643166|gb|AEE76687.1| meiotic recombination protein DMC1-like protein [Arabidopsis
thaliana]
Length = 344
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 52/296 (17%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT + L + K T GC +D LGGGI ++ITE E SGKTQ L ++ QL
Sbjct: 93 MTGSDALIKRKSVVKITTGCQALDDLLGGGIETSAITEAFGEFRSGKTQLAHTLCVTTQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P++ G + Y+ TE F R+ ++ F + I+ ++ H + LL
Sbjct: 153 PTNMKGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ S P R++++DSI ALFR DF + ++ L +S ++K +A
Sbjct: 213 LAAKM---------SEEPFRILIVDSIIALFRVDFTGRGELADRQQKLAQMLSRLIK-IA 262
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F +AV +TNQV+ +P G ++ S P PA G A+ RL
Sbjct: 263 EEFNVAVYMTNQVI--ADPG-----------GGMFIS-DPKKPAGGHVLAHAATIRLLFR 308
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ + + VC+ V AP+LA+ F+IT+ G+
Sbjct: 309 KGK------------------GDTRVCK-------VYDAPNLAEAEASFQITQGGI 339
>gi|282165652|ref|YP_003358037.1| DNA repair and recombination protein RadA [Methanocella paludicola
SANAE]
gi|282157966|dbj|BAI63054.1| DNA repair and recombination protein RadA [Methanocella paludicola
SANAE]
Length = 323
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 93/185 (50%), Gaps = 16/185 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K G +D LGGG+ SITE E GSGKTQ QL + QLP GGL S + +
Sbjct: 82 KLKTGSNALDELLGGGVETQSITEFYGEFGSGKTQVAHQLAVKVQLPPEEGGLGGSVIMI 141
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDY---IFVQSVHSVDQLLDIMPKIESFIKNSSN 135
TE F R+ Q+ + D +P ++ I V ++ + + ++ + +
Sbjct: 142 DTENTFRPERIAQMVKGLKGGEDLDPEEFLKNIHVARAYNSNHQILLVESASELAEKMRD 201
Query: 136 SRLPIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLKAMAVGFG----LAVL 189
S P++LI++DS+ A FRS++ T+ D +++ L + +++ FG A++
Sbjct: 202 SDRPVKLIIVDSLTAHFRSEYVGRGTLADRQQK--LNKHMHDLMR-----FGDINNAAIV 254
Query: 190 VTNQV 194
VTNQV
Sbjct: 255 VTNQV 259
>gi|294944311|ref|XP_002784192.1| meiotic recombination protein DMC1, putative [Perkinsus marinus
ATCC 50983]
gi|239897226|gb|EER15988.1| meiotic recombination protein DMC1, putative [Perkinsus marinus
ATCC 50983]
Length = 335
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 124/279 (44%), Gaps = 45/279 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D+ LGGGI SITE E GKTQ C L++ AQ+P S+GG + Y+
Sbjct: 97 RLSTGSSKVDQLLGGGIESCSITEFYGEFRCGKTQLCHSLSVIAQMPQSYGGANGKVCYI 156
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ F + D I ++ + L+ ++ + + + +
Sbjct: 157 DTENTFRPDRITQIAQAF-GVDPQQVLDNIIYARCYNSEHLVQLLLCVAAKMAEEKYA-- 213
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+V+DSI FR DF DL +R L ++ L+ ++ + LAV++TNQV +
Sbjct: 214 ---LLVVDSIMGPFRVDFTGR-GDLAERQQLLSRVMSRLQKLSEEYNLAVVITNQV--MA 267
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+P ++ + P P G A+ +R+ L +
Sbjct: 268 DPAAAMS-----------FAANPPKPIGGHVLAHYSTTRIALRKG--------------- 301
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
R +R + ++ +P+L + C FEI +G+
Sbjct: 302 ----------RGEQRIMKIIDSPNLPEGDCVFEICTKGI 330
>gi|300175731|emb|CBK21274.2| unnamed protein product [Blastocystis hominis]
Length = 292
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 130/283 (45%), Gaps = 43/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G +D LGGGI SITE+ E +GKTQ L ++AQLPS G + ++L
Sbjct: 52 KITTGSSDLDTLLGGGIETMSITEIFGEFRTGKTQLAHTLCVTAQLPSEMHGANGKVIFL 111
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F +R+ +++ + + D D I + ++ +Q +D++ + I ++
Sbjct: 112 DTEGTFRPQRVVEIAGRYGLNGDE-VLDNILLARAYTHEQQMDVITAAAAKIVEDNS--- 167
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
P L+V+DSI ALFR D+ + +++ L +S LK +A F +AV++ NQV
Sbjct: 168 PYHLLVVDSITALFRVDYSGRGELAERQQKLGRHLSA-LKKLAEEFNVAVVIINQVT--- 223
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G + V + + +PI G A+ +RL+ +
Sbjct: 224 -ADPGAAAMFVKD------TKKPIG---GNIIAHASTTRLYFKK---------------- 257
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G G E +C+ V +P LA+ F I +GV +
Sbjct: 258 -GKG-EQRICK-------VYDSPDLAENEATFAIGPQGVMNAD 291
>gi|291405699|ref|XP_002719136.1| PREDICTED: RAD51 homolog C [Oryctolagus cuniculus]
Length = 473
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 44/263 (16%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGGIP TE+ G GKTQ C+QL +
Sbjct: 73 GKKCTALELLEQEHTQSFIITFCSAVDNILGGGIPLMKTTEICGAPGVGKTQLCMQLAVD 132
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDH-------------- 102
Q+P GG++ ++++ TE F + R+ +L+ H + H
Sbjct: 133 VQIPECFGGVAGEAVFIDTEGSFMVDRVVELATACIQHLHLIAGTHMEEEQKALEEFTLE 192
Query: 103 NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDD 162
N +I+ +LL + + F+ S +RL+++D IA FR D +DD
Sbjct: 193 NILSHIYYFRCCDYTELLAQVYLLPDFLSEHSK----VRLVIVDGIAFPFRHD----LDD 244
Query: 163 LKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPI 222
L R+ L ++ + ++A LAV++TNQ+ +E ++ + +
Sbjct: 245 LSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIEKDQAL-----------------L 287
Query: 223 CPALGIAWANCVNSRLFLSRNED 245
PALG +W + RL +++
Sbjct: 288 VPALGESWGHAATIRLVFHWDQN 310
>gi|298713772|emb|CBJ27144.1| DNA repair and recombination protein Rad51A [Ectocarpus
siliculosus]
Length = 343
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 125/281 (44%), Gaps = 49/281 (17%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GGI S+TE+ E +GKTQ C L ++ Q+P GG ++Y+ T
Sbjct: 108 TTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQMPLDAGGGEGKAMYIDT 167
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F +RL ++ F + D + + + H+ +Q +D++ + + +
Sbjct: 168 EGTFRPQRLTAIAERFGLNGD-DVLENVAYARAHNSEQQMDLLKMASAMMAEDRYA---- 222
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+VIDS AL+R+D+ +L +R + L MA FG+AV++TNQVV P
Sbjct: 223 -LLVIDSATALYRTDYCG-RGELSERQMQLAQFLRQLTRMAEEFGVAVVLTNQVV--ANP 278
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGG 260
+ + S +PI + IA A+ RL +R ++
Sbjct: 279 D---------GMSFAKDSTKPIGGNI-IAHASTTRLRLRKARGDN--------------- 313
Query: 261 SGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
R V +P LA++ C+F I G GVE
Sbjct: 314 ------------RICQVFDSPTLAESECQFSI---GPVGVE 339
>gi|344240520|gb|EGV96623.1| Protein phosphatase 1E [Cricetulus griseus]
Length = 880
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGGIP TE+ G GKTQ C+QL +
Sbjct: 73 GKKYTALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVD 132
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRR-----------LHQLSHTFRPSNDH-------- 102
Q+P GG++ ++++ TE F + R LH ++ T +
Sbjct: 133 VQIPECFGGVAGEAVFIDTEGSFMVDRVVTLANACIQHLHLIAGTHKDEEHQKALEGFTL 192
Query: 103 -NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
N +I+ H +LL + + F+ N S ++L++ID IA FR D +D
Sbjct: 193 ENILSHIYYFRCHDYTELLAQVYLLPDFLSNHSK----VQLVIIDGIALPFRHD----LD 244
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGV 204
DL R+ L ++ + ++A LAV++TNQ+ ++ N+ +
Sbjct: 245 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQAL 287
>gi|241007827|ref|XP_002405184.1| DNA repair protein RAD51/RHP55, putative [Ixodes scapularis]
gi|215491711|gb|EEC01352.1| DNA repair protein RAD51/RHP55, putative [Ixodes scapularis]
Length = 352
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ LGGGI SITE+ E +GKTQ C + ++ QLP H G LY+
Sbjct: 114 QITTGSTELDKLLGGGIETGSITEVFGEFRTGKTQLCHMMAVTCQLPIEHSGGEGKCLYI 173
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL + + S + D + ++ D ++ + + + + +
Sbjct: 174 DTEGTFRPERLLAAAEKYGLSGP-DVLDNVAYARAYNSDHQTQLLIQASAMMAETRYA-- 230
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+V+DS AL+R+D+ +L R + ML +A FG+AVL+TNQVV +
Sbjct: 231 ---LLVVDSAMALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVLITNQVVAQV 286
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 287 D-------------GASMFAADPKKPIGGNIMAHASTTRLYLRK 317
>gi|390343398|ref|XP_003725868.1| PREDICTED: DNA repair protein RAD51 homolog 3-like isoform 1
[Strongylocentrotus purpuratus]
Length = 415
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 128/292 (43%), Gaps = 64/292 (21%)
Query: 24 CPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFP 83
C +D LGGG+P ITE+ G GKTQ C+QL + Q+P+S GG+ ++Y+ TE
Sbjct: 127 CEELDEMLGGGVPMCKITEICGAPGVGKTQTCIQLCVDVQIPASLGGVEGEAVYIDTEGS 186
Query: 84 FPMRRLHQLS-----HTFRPSNDHNPCDY--------IFVQSVHSVDQLLDIMPKIESFI 130
F +R ++ H + D+ I H+ +LL ++ + F+
Sbjct: 187 FIPQRAWGIAQAATEHCHTMGDQAELKDFTTEKILSGIHYFRCHNHVELLALVNLLPEFL 246
Query: 131 KNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLV 190
S N + ++LI++DSIA FR DF DD+ R+ L ++ +A + LAV++
Sbjct: 247 --SKNPK--VKLIIVDSIAFHFRHDF----DDMSLRTRLLNGLAQNFIRIATQYNLAVVL 298
Query: 191 TNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRE 250
TNQ+ + EG + L PALG +W + RL L
Sbjct: 299 TNQMTTKI--GEGTSHL---------------IPALGESWGHACTIRLIL---------- 331
Query: 251 NQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVER 302
++ +R ++ +P + + ++IT+ GV + R
Sbjct: 332 ----------------YWKQAQRYANLYKSPSKQEATVPYQITQAGVRSISR 367
>gi|338710970|ref|XP_001500693.3| PREDICTED: DNA repair protein RAD51 homolog 3 [Equus caballus]
Length = 337
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 45/263 (17%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGG+P TE+ G GKTQ C+QL +
Sbjct: 73 GKKCTALELLEQEHTQNFIITFCSALDNILGGGVPLTKTTEICGAPGVGKTQLCMQLAVD 132
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRL--------------------HQLSHTFRPSND 101
Q+P GG+ ++++ TE F + R+ + S
Sbjct: 133 VQIPECFGGVEGEAVFIDTEGSFMVDRVVDIANACIQHLQLIAGTHLGEEYSKALEDFTL 192
Query: 102 HNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
N +I+ +LL + + F+ S +RL+++D IA FR D +D
Sbjct: 193 ENILSHIYYFRCRDYTELLAQVYLLPDFLSEHSK----VRLVIVDGIAFPFRHD----LD 244
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL R+ L ++ + ++A LAV++TNQ+ ++ N+ +
Sbjct: 245 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQAL----------------- 287
Query: 222 ICPALGIAWANCVNSRLFLSRNE 244
+ PALG +W + RL ++
Sbjct: 288 LVPALGESWGHAATIRLIFHWDQ 310
>gi|224028841|gb|ACN33496.1| unknown [Zea mays]
gi|414881529|tpg|DAA58660.1| TPA: hypothetical protein ZEAMMB73_968311 [Zea mays]
Length = 270
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 118/253 (46%), Gaps = 44/253 (17%)
Query: 10 LLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHG 69
+ + L+ + T G ++ LGGGI C +TE+ G GKTQ +QL ++ Q+P G
Sbjct: 1 MFSDELSQKHITTGSGDLNDILGGGIHCKEVTEIGGVPGVGKTQLGIQLAINVQIPVECG 60
Query: 70 GLSASSLYLHTEFPFPMRRLHQLSHT-FRPSNDHNPCDY------------------IFV 110
GL ++Y+ TE F + R++Q++ R +H P + I+
Sbjct: 61 GLGGKAVYIDTEGSFMVERVYQIAEGCIRDILEHFPHSHEKSSSVQKQLQPERFLADIYY 120
Query: 111 QSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLF 170
+ S + + ++ +E F++ + +R+++IDS+ FR DF +DL R+ +
Sbjct: 121 FRICSYTEQIAVINYMEKFLREHKD----VRIVIIDSVTFHFRQDF----EDLALRTRVL 172
Query: 171 FKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAW 230
+S L +A + LAV++ NQV + EG L + ALG +W
Sbjct: 173 SGLSLKLMKIAKTYNLAVVLLNQVT--TKFTEGSFQLTL---------------ALGDSW 215
Query: 231 ANCVNSRLFLSRN 243
++ +RL L N
Sbjct: 216 SHSCTNRLILHWN 228
>gi|342879892|gb|EGU81125.1| hypothetical protein FOXB_08399 [Fusarium oxysporum Fo5176]
Length = 439
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 100/199 (50%), Gaps = 9/199 (4%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPI-IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQ 63
++PQ L P K +D LGGG+P ITE+ ESG+GKTQ L L L+ Q
Sbjct: 67 LSPQQPLLQPAEEPKVISTLDEGLDAALGGGVPVGVITEITGESGAGKTQALLSLCLAVQ 126
Query: 64 LPSSHGGLSASSLYLHTEFPFPMRRLHQL--SHTFRPSNDHNPCDYIFVQSVHS-VDQLL 120
LP H GL +LY+ TE RL Q+ S+ D +P + ++HS V L
Sbjct: 127 LPPPH-GLGREALYISTEAALATSRLAQMLNSNPILQQYD-DPETRPSLDAIHSAVTPDL 184
Query: 121 DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNT---MDDLKKRSFLFFKISGML 177
+ I F SR I LI++DS+AA +R++F+ ++ RS ++ +L
Sbjct: 185 ETQDHILDFQVPVLLSRHKIGLIILDSVAANYRAEFERQGSHGSNMAARSAELVRLGALL 244
Query: 178 KAMAVGFGLAVLVTNQVVD 196
+ +A LAV+V NQV D
Sbjct: 245 RDLARRHNLAVVVANQVAD 263
>gi|50309711|ref|XP_454867.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644002|emb|CAG99954.1| KLLA0E20241p [Kluyveromyces lactis]
Length = 369
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITEL E +GK+Q C L ++ Q+P GG LY+ T
Sbjct: 130 TTGSKNLDTLLGGGIETGSITELFGEFRTGKSQLCHTLAVTCQIPLDMGGGEGKCLYIDT 189
Query: 81 EFPFPMRRLHQLSHTF--RPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F RL ++ F P + N Y + +LLD ++ S SR
Sbjct: 190 EGTFRPIRLVSIAQRFGLDPDDALNNVAYARAYNADHQLKLLDAAAQM------MSESRF 243
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
LI++DSI AL+R+DF +L R K L+ +A FG+A +VTNQVV
Sbjct: 244 S--LIIVDSIMALYRTDFSGR-GELSARQMHLAKFMRSLQRLADQFGVAAVVTNQVV 297
>gi|452985882|gb|EME85638.1| hypothetical protein MYCFIDRAFT_131842 [Pseudocercospora fijiensis
CIRAD86]
Length = 420
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 136/327 (41%), Gaps = 65/327 (19%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL----PSSHGGLSASSLYLHTEF 82
+D LGGGI +TE+V ES +GKTQF L L L+ Q+ P S ++LY+ TE
Sbjct: 89 LDTVLGGGIARGHLTEIVGESAAGKTQFLLTLLLAVQMSVTTPDSTPRHGTAALYISTEA 148
Query: 83 PFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVD-QLLDIMPKIESFIKNSSNSRLPIR 141
P RL Q+ P + + +VHS L+ I + + + +
Sbjct: 149 PLQTTRLTQILTNHPKLVALPPAERPSLSNVHSTHLHDLEAQEHILRYQVPVAIEKHNVG 208
Query: 142 LIVIDSIAALFRSDFDNTMDDLK------KRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS+AA +R++FD K KRS K + +L+++A + +AV+V NQV
Sbjct: 209 LLVVDSVAANYRAEFDRGGPGRKGSEARAKRSAQLAKTASLLRSLAQKYDIAVVVANQVA 268
Query: 196 D--------LMEPNEGVNGLRVG---------------NLGCLYSSGRPIC--------- 223
D L P + R G N L S P+
Sbjct: 269 DRFSSTEPALALPPQSTQSTRPGSPLPPFAPTQQRSHPNSAGLLSHDDPLALDHQQRFFT 328
Query: 224 -------------PALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRR 270
P+LG+ W N +++R+ L ++ + + G E +
Sbjct: 329 GWGDDPSVTSLKTPSLGLTWTNQLSARIALLKHPIYETKPY--------APGDERNLIGW 380
Query: 271 TRRSLHVVFAPHLADTSCEFEITREGV 297
R++ VVF A+++ FEI G+
Sbjct: 381 N-RAMKVVFGAWCAESTTTFEIWEGGI 406
>gi|37931470|gb|AAP13463.1| Rad51p [Kluyveromyces lactis]
Length = 369
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITEL E +GK+Q C L ++ Q+P GG LY+ T
Sbjct: 130 TTGSKNLDTLLGGGIETGSITELFGEFRTGKSQLCHTLAVTCQIPLDMGGGEGKCLYIDT 189
Query: 81 EFPFPMRRLHQLSHTF--RPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F RL ++ F P + N Y + +LLD ++ S SR
Sbjct: 190 EGTFRPIRLVSIAQRFGLDPDDALNNVAYARAYNADHQLKLLDAAAQM------MSESRF 243
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
LI++DSI AL+R+DF +L R K L+ +A FG+A +VTNQVV
Sbjct: 244 S--LIIVDSIMALYRTDFSGR-GELSARQMHLAKFMRSLQRLADQFGVAAVVTNQVV 297
>gi|358417193|ref|XP_613584.5| PREDICTED: DNA repair protein RAD51 homolog 3 [Bos taurus]
gi|359076460|ref|XP_002695646.2| PREDICTED: DNA repair protein RAD51 homolog 3 [Bos taurus]
Length = 371
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 111/263 (42%), Gaps = 45/263 (17%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGGIP TE+ G GKTQ C+QL +
Sbjct: 73 GRKCTALELLEQEHTQNFIITFCSALDNILGGGIPLTKTTEICGAPGVGKTQLCMQLAID 132
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDH-------------- 102
Q+P GG+ ++++ TE F + R+ L+ H + H
Sbjct: 133 VQIPECFGGVEGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAGTHMEEEHPKALQDFTL 192
Query: 103 -NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
N +I+ +LL + + F+ S +RL+++D IA FR D +D
Sbjct: 193 ENILSHIYYFRCRDYTELLAQVYLLSDFLSEHSK----VRLVIVDGIAFPFRHD----LD 244
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL R+ L ++ + ++A LAV++TNQ+ + N+ +
Sbjct: 245 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKFDRNQAL----------------- 287
Query: 222 ICPALGIAWANCVNSRLFLSRNE 244
+ PALG +W + RL ++
Sbjct: 288 LVPALGESWGHAATIRLIFHWDQ 310
>gi|346465319|gb|AEO32504.1| hypothetical protein [Amblyomma maculatum]
Length = 296
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 7/177 (3%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ LGGGI SITE+ E +GKTQ C L ++ QLP H G LY+
Sbjct: 97 QITTGSKELDKLLGGGIETGSITEMFGEFRTGKTQLCHMLAVTCQLPIEHSGGEGKCLYI 156
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + ++ D ++ + + + + +
Sbjct: 157 DTEGTFRPERLLAVADKYGLSG-QDVLDNVAYARAYNSDHQTQLLIQASAMMAETRYA-- 213
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV
Sbjct: 214 ---LLIVDSATALYRTDYSG-RGELSARQMHLARFLRMLLRLADEFGVAVVITNQVV 266
>gi|440902018|gb|ELR52867.1| DNA repair protein RAD51-like protein 3, partial [Bos grunniens
mutus]
Length = 368
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 111/263 (42%), Gaps = 45/263 (17%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGGIP TE+ G GKTQ C+QL +
Sbjct: 75 GRKCTALELLEQEHTQNFIITFCSALDNILGGGIPLTKTTEICGAPGVGKTQLCMQLAID 134
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDH-------------- 102
Q+P GG+ ++++ TE F + R+ L+ H + H
Sbjct: 135 VQIPECFGGVEGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAGTHMEEEHPKALQDFTL 194
Query: 103 -NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
N +I+ +LL + + F+ S +RL+++D IA FR D +D
Sbjct: 195 ENILSHIYYFRCRDYTELLAQVYLLSDFLSEHSK----VRLVIVDGIAFPFRHD----LD 246
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL R+ L ++ + ++A LAV++TNQ+ + N+ +
Sbjct: 247 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKFDRNQAL----------------- 289
Query: 222 ICPALGIAWANCVNSRLFLSRNE 244
+ PALG +W + RL ++
Sbjct: 290 LVPALGESWGHAATIRLIFHWDQ 312
>gi|387597245|gb|EIJ94865.1| DNA repair protein RAD51 [Nematocida parisii ERTm1]
Length = 341
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 130/295 (44%), Gaps = 50/295 (16%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T + + L + T G +D+ LGGGI SITEL E +GKTQ C L ++ QLP
Sbjct: 89 TAEVVHQKRLQMKMITTGSSELDKLLGGGIETGSITELFGEFRTGKTQLCHMLAVTCQLP 148
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSND---HNPCDYIFVQSVHSVDQLLDI 122
+ GG + ++Y+ TE F RL +++ ++ + N C V ++VD +++
Sbjct: 149 TELGGCNGKAVYIDTEATFRSERLIEIAKRYQLDPNVVLSNVC----VARAYNVDHQIEL 204
Query: 123 MPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAV 182
+ + S + + RL ++DSI A +R+DF + ++ L + +++ +A
Sbjct: 205 VKQAGSLMASGE-----YRLCIVDSIIAHYRTDFSGRGELSARQMHLGVYLRSLMQ-LAD 258
Query: 183 GFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ +A+++TNQVV ++ + G G P G A+ +RL+L +
Sbjct: 259 EYNVAIVITNQVVAQVDGAASMFG------------GDTKKPTGGHVLAHASATRLYLRK 306
Query: 243 NEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
R R V +P L ++ F I +EG+
Sbjct: 307 G-------------------------RGDLRICKVYDSPSLPESEATFRIIKEGI 336
>gi|187469096|gb|AAI66862.1| Rad51c protein [Rattus norvegicus]
Length = 345
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 110/255 (43%), Gaps = 45/255 (17%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T LL+ T C +D LGGGIP TE+ G GKTQ C+QL + Q+P
Sbjct: 56 TALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIP 115
Query: 66 SSHGGLSASSLYLHTEFPFPMRR-----------LHQLSHTFRPSNDH---------NPC 105
GG++ ++++ TE F + R LH ++ T N
Sbjct: 116 ECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEQQKALKDFTLENIL 175
Query: 106 DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKK 165
+I+ H +LL + + F+ + S ++L++ID IA FR D +DDL
Sbjct: 176 SHIYYFRCHDYTELLAQVYLLPDFLSDHSK----VQLVIIDGIAFPFRHD----LDDLFL 227
Query: 166 RSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPA 225
R+ L ++ L ++A LAV++TNQ+ ++ N+ + PA
Sbjct: 228 RTRLLNGLAQQLISLANKHRLAVILTNQMTTKIDKNQA-----------------SLVPA 270
Query: 226 LGIAWANCVNSRLFL 240
LG +W + RL
Sbjct: 271 LGESWGHAATIRLIF 285
>gi|302806525|ref|XP_002985012.1| hypothetical protein SELMODRAFT_424156 [Selaginella moellendorffii]
gi|300147222|gb|EFJ13887.1| hypothetical protein SELMODRAFT_424156 [Selaginella moellendorffii]
Length = 356
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 33/146 (22%)
Query: 100 NDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNT 159
N +P +FV+ S+ QL ++E + P+RL++IDS+AA FRS+ DN
Sbjct: 11 NGFDPSKNVFVEPAESIQQLFTYFERLERVLNQQQRRERPVRLLLIDSVAASFRSELDNN 70
Query: 160 MDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSG 219
++ +M+ +G G+++GNL L SSG
Sbjct: 71 RTEM---------------------------------VMDCVDGSKGIQIGNLLELVSSG 97
Query: 220 RPICPALGIAWANCVNSRLFLSRNED 245
R I PALG++WA+C+N+RLFLSR ++
Sbjct: 98 RRIAPALGLSWAHCINTRLFLSRRDE 123
>gi|195574987|ref|XP_002105464.1| GD17366 [Drosophila simulans]
gi|194201391|gb|EDX14967.1| GD17366 [Drosophila simulans]
Length = 336
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 21/226 (9%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D+ LGGGI SITE+ E GKTQ C L ++ QLP S G +Y+
Sbjct: 98 QLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYI 157
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ ++ N+ D + H+ DQ ++ + S +
Sbjct: 158 DTENTFRPERLAAIAQRYKL-NESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYA-- 214
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+RSD+ + +++ L + ML+ +A FG+AV++TNQV +
Sbjct: 215 ---LLIVDSAMALYRSDYIGRGELAARQNHLGLFLR-MLQRLADEFGVAVVITNQVTASL 270
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
+ G ++ + +PI G A+ +RL+L + +
Sbjct: 271 DGAPG-----------MFDAKKPIG---GHIMAHSSTTRLYLRKGK 302
>gi|383863607|ref|XP_003707271.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Megachile
rotundata]
Length = 341
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +DR LGGGI SITE+ E SGKTQ C L ++ QLP GG LY+ T
Sbjct: 104 TTGSSELDRLLGGGIETGSITEIFGEFRSGKTQLCHTLAVNCQLPIDMGGAEGKCLYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ ++ + D + D + ++ D ++ + + + S +
Sbjct: 164 EGTFRPERLIAVAERYKIAGD-SVLDNVACARAYNTDHQTKLLIQASAMMTESRYA---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+D+ +L R + ML +A G+AV++TNQVV
Sbjct: 219 -LLIVDSATSLYRTDYSG-RGELSARQTHLARFLRMLLRIADEHGVAVVITNQVV 271
>gi|195341431|ref|XP_002037313.1| GM12184 [Drosophila sechellia]
gi|194131429|gb|EDW53472.1| GM12184 [Drosophila sechellia]
Length = 336
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 21/226 (9%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D+ LGGGI SITE+ E GKTQ C L ++ QLP S G +Y+
Sbjct: 98 QLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYI 157
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ ++ N+ D + H+ DQ ++ + S +
Sbjct: 158 DTENTFRPERLAAIAQRYKL-NESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYA-- 214
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+RSD+ + +++ L + ML+ +A FG+AV++TNQV +
Sbjct: 215 ---LLIVDSAMALYRSDYIGRGELAARQNHLGLFLR-MLQRLADEFGVAVVITNQVTASL 270
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
+ G ++ + +PI G A+ +RL+L + +
Sbjct: 271 DGAPG-----------MFDAKKPIG---GHIMAHSSTTRLYLRKGK 302
>gi|213972612|ref|NP_001123249.1| Rad51 homolog c [Rattus norvegicus]
gi|149053773|gb|EDM05590.1| similar to RAD51L2/RAD51C protein (predicted) [Rattus norvegicus]
Length = 366
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 110/255 (43%), Gaps = 45/255 (17%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T LL+ T C +D LGGGIP TE+ G GKTQ C+QL + Q+P
Sbjct: 77 TALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIP 136
Query: 66 SSHGGLSASSLYLHTEFPFPMRR-----------LHQLSHTFRPSNDH---------NPC 105
GG++ ++++ TE F + R LH ++ T N
Sbjct: 137 ECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEQQKALKDFTLENIL 196
Query: 106 DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKK 165
+I+ H +LL + + F+ + S ++L++ID IA FR D +DDL
Sbjct: 197 SHIYYFRCHDYTELLAQVYLLPDFLSDHSK----VQLVIIDGIAFPFRHD----LDDLFL 248
Query: 166 RSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPA 225
R+ L ++ L ++A LAV++TNQ+ ++ N+ + PA
Sbjct: 249 RTRLLNGLAQQLISLANKHRLAVILTNQMTTKIDKNQA-----------------SLVPA 291
Query: 226 LGIAWANCVNSRLFL 240
LG +W + RL
Sbjct: 292 LGESWGHAATIRLIF 306
>gi|17864108|ref|NP_524583.1| spindle A, isoform A [Drosophila melanogaster]
gi|2500104|sp|Q27297.1|RAD51_DROME RecName: Full=DNA repair protein Rad51 homolog; AltName:
Full=Protein spindle-A; AltName: Full=RecA protein
homolog
gi|693878|dbj|BAA04580.1| Rad51 [Drosophila melanogaster]
gi|762789|gb|AAA64873.1| RAD51-like protein [Drosophila melanogaster]
gi|807700|dbj|BAA07039.1| RecA protein homologue [Drosophila melanogaster]
gi|7301897|gb|AAF57005.1| spindle A, isoform A [Drosophila melanogaster]
gi|255522982|gb|ACU12383.1| RE29170p [Drosophila melanogaster]
Length = 336
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 21/226 (9%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D+ LGGGI SITE+ E GKTQ C L ++ QLP S G +Y+
Sbjct: 98 QLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYI 157
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ ++ N+ D + H+ DQ ++ + S +
Sbjct: 158 DTENTFRPERLAAIAQRYKL-NESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYA-- 214
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+RSD+ + +++ L + ML+ +A FG+AV++TNQV +
Sbjct: 215 ---LLIVDSAMALYRSDYIGRGELAARQNHLGLFLR-MLQRLADEFGVAVVITNQVTASL 270
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
+ G ++ + +PI G A+ +RL+L + +
Sbjct: 271 DGAPG-----------MFDAKKPIG---GHIMAHSSTTRLYLRKGK 302
>gi|357135308|ref|XP_003569252.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Brachypodium
distachyon]
Length = 309
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 44/254 (17%)
Query: 9 NLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSH 68
+LL + + + T G ++ LGGGI C +TE+ G GKTQ +QL ++ Q+P +
Sbjct: 39 DLLSDEQSQKHITTGSGDLNSILGGGIHCKEVTEIGGVPGVGKTQLGIQLAINVQIPVEY 98
Query: 69 GGLSASSLYLHTEFPFPMRRLHQLSHT----------FRPSNDHNPCDY---------IF 109
GGL ++Y+ TE F + R++Q++ +R + ++ I+
Sbjct: 99 GGLGGKAVYIDTEGSFMVERVYQIAEGCISDIMEYFPYRHDKASSGREHLQPERFLADIY 158
Query: 110 VQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFL 169
V S + + ++ +E F+ + +R+I+IDS+ FR DF DDL R+ +
Sbjct: 159 YFRVCSYTEQIAVINYLEKFLGEHKD----VRIIIIDSVTFHFRQDF----DDLALRTRV 210
Query: 170 FFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIA 229
+S L ++ + +AV++ NQV + EG L + ALG +
Sbjct: 211 LSGLSLKLMKLSKTYNVAVVLLNQVT--TKFTEGSFQLTL---------------ALGDS 253
Query: 230 WANCVNSRLFLSRN 243
W++ +RL L N
Sbjct: 254 WSHSCTNRLILYWN 267
>gi|24651285|ref|NP_733342.1| spindle A, isoform B [Drosophila melanogaster]
gi|23172653|gb|AAN14213.1| spindle A, isoform B [Drosophila melanogaster]
Length = 279
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 21/226 (9%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D+ LGGGI SITE+ E GKTQ C L ++ QLP S G +Y+
Sbjct: 41 QLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYI 100
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ ++ N+ D + H+ DQ ++ + S +
Sbjct: 101 DTENTFRPERLAAIAQRYKL-NESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYA-- 157
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+RSD+ + +++ L + ML+ +A FG+AV++TNQV +
Sbjct: 158 ---LLIVDSAMALYRSDYIGRGELAARQNHLGLFLR-MLQRLADEFGVAVVITNQVTASL 213
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
+ G ++ + +PI G A+ +RL+L + +
Sbjct: 214 DGAPG-----------MFDAKKPIG---GHIMAHSSTTRLYLRKGK 245
>gi|452209062|ref|YP_007489176.1| DNA repair and recombination protein RadA [Methanosarcina mazei
Tuc01]
gi|34395788|sp|Q8PZN5.2|RADA_METMA RecName: Full=DNA repair and recombination protein RadA
gi|452098964|gb|AGF95904.1| DNA repair and recombination protein RadA [Methanosarcina mazei
Tuc01]
Length = 325
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 120/249 (48%), Gaps = 46/249 (18%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T GC D +GGGI +ITEL E GSGKTQ QL ++ Q+ HGGL S + +
Sbjct: 81 KLTTGCTEFDEMMGGGIETQAITELYGEFGSGKTQVAHQLAVNVQMDREHGGLGGSVIII 140
Query: 79 HTEFPFPMRRLHQLSHTF--RPSNDHNPCDYIFVQSVHS------------VDQLLDIMP 124
TE F R+ Q+ + + + NP + F+Q++H VD +D+
Sbjct: 141 DTENTFRPERITQMVNGLSEKYGMELNPEE--FLQNIHVARAYNSNHQILLVDSAVDLAN 198
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLKAMAV 182
+++ K P+RL+++DS+ A FR+++ T+ D +++ L + G+L+ +
Sbjct: 199 ELKEMGK-------PVRLLIVDSLMAHFRAEYVGRGTLADRQQK--LNKHMHGLLRFGDL 249
Query: 183 GFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL-- 240
F V+VTNQV + +P+ + G P P G + RL+L
Sbjct: 250 -FNACVVVTNQV--MAKPD------------AFF--GDPTRPIGGHIVGHTATFRLYLRK 292
Query: 241 SRNEDFVVR 249
S+ E ++R
Sbjct: 293 SKGEKRIIR 301
>gi|294494932|ref|YP_003541425.1| DNA repair and recombination protein RadA [Methanohalophilus mahii
DSM 5219]
gi|292665931|gb|ADE35780.1| DNA repair and recombination protein RadA [Methanohalophilus mahii
DSM 5219]
Length = 325
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 15/148 (10%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K GC D +GGGI SITE+ E GSGKTQ QL ++ QLP GGL S + +
Sbjct: 81 KLRTGCEEFDELMGGGIETQSITEMYGEFGSGKTQIAHQLAVNTQLPKEMGGLDGSVIII 140
Query: 79 HTEFPFPMRRLHQ----LSHTFRPSNDHNPCDYI----FVQSVHSVDQLL--DIMPKIES 128
TE F R+ LSH F D +P +++ ++ +S Q+L D ++ +
Sbjct: 141 DTENTFRPERIEHMVAGLSHKFE--QDFDPAEFLKNIHVARAYNSNHQILLVDAATEMAN 198
Query: 129 FIKNSSNSRLPIRLIVIDSIAALFRSDF 156
+KN+ P+RL+++DS+ A FR+++
Sbjct: 199 KLKNTDK---PVRLVIVDSLTAHFRAEY 223
>gi|157129016|ref|XP_001655247.1| RAD51C protein, putative [Aedes aegypti]
gi|108872406|gb|EAT36631.1| AAEL011307-PA [Aedes aegypti]
Length = 274
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 114/241 (47%), Gaps = 44/241 (18%)
Query: 24 CPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFP 83
C +D+ +G GI ITEL GSGKTQ CLQL ++ Q+P GGL A ++Y T F
Sbjct: 23 CRDLDQAIGNGISVGMITELCGPPGSGKTQMCLQLCINTQIPVQLGGLGAKAIYFDTNFG 82
Query: 84 FPMRRLHQL-----SHTFRPSNDHNP--------------CDYIFVQSVHSVDQLLDIMP 124
F RL ++ +H + H + ++ + + S +LL+ +
Sbjct: 83 FHPCRLQEIASACVTHCQKLVQIHKKELATVTRDFTVDSLMNGVYYKHIQSCSELLEGIE 142
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
+ S +K+ I+L+V+DS++ L R++ +N+ + ++ + K L +A +
Sbjct: 143 TLGSLLKSGDK----IKLVVLDSVSFLIRNNIENSFERIEVDHVILTK----LHVLAHQY 194
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
A+++TN V +NG I PALG A ++ +N R+ L +++
Sbjct: 195 KCAIVITNDV------TTRING-----------QDSKIVPALGDAHSHKINQRIVLGQSD 237
Query: 245 D 245
+
Sbjct: 238 E 238
>gi|195505060|ref|XP_002099346.1| GE23416 [Drosophila yakuba]
gi|194185447|gb|EDW99058.1| GE23416 [Drosophila yakuba]
Length = 335
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 21/226 (9%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D+ LGGGI SITE+ E GKTQ C L ++ QLP S G +Y+
Sbjct: 97 QLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYI 156
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ ++ N+ D + H+ DQ ++ + S +
Sbjct: 157 DTENTFRPERLAAIAQRYKL-NESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYA-- 213
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+RSD+ + +++ L + ML+ +A FG+AV++TNQV +
Sbjct: 214 ---LLIVDSAMALYRSDYIGRGELAARQNHLGLFLR-MLQRLADEFGVAVVITNQVTASL 269
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
+ G ++ + +PI G A+ +RL+L + +
Sbjct: 270 DGAPG-----------MFDAKKPIG---GHIMAHSSTTRLYLRKGK 301
>gi|25012918|gb|AAN71546.1| RH24133p [Drosophila melanogaster]
Length = 284
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 21/226 (9%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D+ LGGGI SITE+ E GKTQ C L ++ QLP S G +Y+
Sbjct: 41 QLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYI 100
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ ++ N+ D + H+ DQ ++ + S +
Sbjct: 101 DTENTFRPERLAAIAQRYKL-NESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYA-- 157
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+RSD+ + +++ L + ML+ +A FG+AV++TNQV +
Sbjct: 158 ---LLIVDSAMALYRSDYIGRGELAARQNHLGLFLR-MLQRLADEFGVAVVITNQVTASL 213
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
+ G ++ + +PI G A+ +RL+L + +
Sbjct: 214 DGAPG-----------MFDAKKPIG---GHIMAHSSTTRLYLRKGK 245
>gi|209875975|ref|XP_002139430.1| Rad51 protein [Cryptosporidium muris RN66]
gi|209555036|gb|EEA05081.1| Rad51 protein, putative [Cryptosporidium muris RN66]
Length = 351
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 111/222 (50%), Gaps = 20/222 (9%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +DR L GGI +ITE+ E +GKTQ C L ++ QLP H G L++ T
Sbjct: 112 TTGSKQLDRLLQGGIETGNITEIFGEFRTGKTQLCHTLAVTCQLPVEHNGGEGKCLWIDT 171
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R+ Q++ F N + D I + + +D++ +S + S SR
Sbjct: 172 EGTFRPERIVQIAERF-SLNASDCLDNIAYARGFNTEHQMDLL---QSAVAMMSESRFA- 226
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+++DS AL+RS+++ + ++S L + G+ K +A FG+AV++TNQV+
Sbjct: 227 -LMIVDSATALYRSEYNGRGELASRQSHLGQFLRGLQK-IADTFGVAVIITNQVMS---- 280
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+V + ++ + + P G A+ +RL+L +
Sbjct: 281 -------KVDAMAAIFQNDK--VPIGGNIIAHASQTRLYLKK 313
>gi|325957924|ref|YP_004289390.1| DNA repair and recombination protein radA [Methanobacterium sp.
AL-21]
gi|325329356|gb|ADZ08418.1| DNA repair and recombination protein radA [Methanobacterium sp.
AL-21]
Length = 311
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 6/189 (3%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T ++++ + T G +D +GGGI SITE+ E GSGK+Q +L ++ QLP
Sbjct: 65 TAMDVMERRKDVGRVTTGSTGLDELIGGGIETQSITEVFGEFGSGKSQISHELAVTVQLP 124
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GGL +++ TE F R+ Q++ F + + ++ +S Q+L + K
Sbjct: 125 PEKGGLGGQCVFIDTENTFRPERIKQIAEGFELDVEEVLTNIHIARAFNSSHQIL-MADK 183
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ I++ +N I+L+++DS+ A FR+++ + L R + L +A +
Sbjct: 184 VNELIQSGAN----IKLVIVDSLTAHFRAEYVG-RESLATRQQKLNQHLHTLSNIANTYN 238
Query: 186 LAVLVTNQV 194
+AV VTNQV
Sbjct: 239 VAVFVTNQV 247
>gi|194905727|ref|XP_001981245.1| GG11967 [Drosophila erecta]
gi|190655883|gb|EDV53115.1| GG11967 [Drosophila erecta]
Length = 335
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 21/226 (9%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D+ LGGGI SITE+ E GKTQ C L ++ QLP S G +Y+
Sbjct: 97 QLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYI 156
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ ++ N+ D + H+ DQ ++ + S +
Sbjct: 157 DTENTFRPERLAAIAQRYKL-NESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYA-- 213
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+RSD+ + +++ L + ML+ +A FG+AV++TNQV +
Sbjct: 214 ---LLIVDSAMALYRSDYIGRGELAARQNHLGLFLR-MLQRLADEFGVAVVITNQVTASL 269
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
+ G ++ + +PI G A+ +RL+L + +
Sbjct: 270 DGAPG-----------MFDAKKPIG---GHIMAHSSTTRLYLRKGK 301
>gi|145349400|ref|XP_001419122.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579353|gb|ABO97415.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 343
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 123/286 (43%), Gaps = 58/286 (20%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI S+TE+ E +GKTQ L +++Q+P HGG LY+ T
Sbjct: 107 TTGSAKVDELLQGGIESGSVTEIYGEFRTGKTQLMHTLAVTSQMPIEHGGGEGKCLYIDT 166
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPC---DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSR 137
E F +RL Q++ F + +P D + H+V+ +++ + + S
Sbjct: 167 EGTFRPQRLIQIAERF----NMDPSAVLDNVAYAKAHNVEHQSELLLAAAGMMAETRFS- 221
Query: 138 LPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDL 197
L++IDS+ L+R++++ +L R K L +A FG+AV+V+NQVV
Sbjct: 222 ----LMIIDSVTNLYRTEYEGR-GELSARQMHLGKFLRQLARLADEFGVAVIVSNQVVAN 276
Query: 198 ME--PNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVN 255
E P G N L+ P G A+ +RL L +
Sbjct: 277 PEGGPFAGANALK---------------PIGGNIMAHASTTRLALRKG------------ 309
Query: 256 GGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
R R + VV +P L ++ +F I+ FG+E
Sbjct: 310 -------------RGENRVMKVVCSPVLPESEAQFSISE---FGIE 339
>gi|50294774|ref|XP_449798.1| hypothetical protein [Candida glabrata CBS 138]
gi|49529112|emb|CAG62776.1| unnamed protein product [Candida glabrata]
Length = 466
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 136/295 (46%), Gaps = 59/295 (20%)
Query: 11 LDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGG 70
L + ++ T G ID LGGGI N ITE+ ES +GK+Q +QL LS QLP S GG
Sbjct: 77 LAKQIPNKQFTTGDLGIDEVLGGGISTNCITEIFGESSTGKSQLLMQLCLSVQLPISEGG 136
Query: 71 LSASSLYLHTEFPFPMRRL----------HQL----SHTFRPSNDHNPCDYIFVQSVHSV 116
L+A +++ TE P RL H+L S+ F S C + Q H V
Sbjct: 137 LNAKCVFITTEGDLPTNRLAGMIEARKDWHELGISQSNIFTVS-----CPDLISQE-HIV 190
Query: 117 DQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNT--MDDLKKRSFLFFKIS 174
+ L ++ + ++ I+LI+IDSI+ R + D D L+ ++++ +++
Sbjct: 191 NVQLPVLLE---------RNKGEIKLIIIDSISHHLRVELDTKSFKDSLENKAYI-TEMA 240
Query: 175 GMLKAMAVGFGLAVLVTNQVVDL-----MEP-NEGVNGLRVGNLGCLYSSG------RPI 222
L+ +A +A++V NQV D ++P N VN L LG L R
Sbjct: 241 EKLQGIATKHSVAIVVANQVGDKPLNENLDPYNLNVNDLEY-QLGWLVGWKNSTILYRQT 299
Query: 223 CPALGIAWANCV--NSRLFLSRNEDFVVRENQM------------VNGGVGGSGS 263
+G + N+ LS +ED+++ E Q+ V G+GGS S
Sbjct: 300 IQQIGFQKQQVIASNADSILSDDEDYMLVEEQVRRIKREEDGEKFVESGIGGSTS 354
>gi|396482153|ref|XP_003841408.1| similar to meiotic recombination protein dmc1 [Leptosphaeria
maculans JN3]
gi|312217982|emb|CBX97929.1| similar to meiotic recombination protein dmc1 [Leptosphaeria
maculans JN3]
Length = 339
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 113/250 (45%), Gaps = 21/250 (8%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T Q L + + + G +D LGGG SI+E+ E GKTQ +++
Sbjct: 82 GGFQTAQELGQHRKRVIRISTGSKALDAVLGGGFQTMSISEVFGEFRCGKTQLSHTMSVI 141
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLD 121
AQLP GG Y+ TE F R+ Q++ F D + + ++V+S Q+
Sbjct: 142 AQLPKDMGGADGKVAYIDTEGTFRPERIAQIAERFGVDPDAAQDNITYARAVNSEHQMEL 201
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ E F+ N RL++IDSI ALFR D+ +L +R + L +A
Sbjct: 202 LNKVAEFFVGNE------YRLLIIDSIMALFRVDY-TGRGELNERQQKLNQFLSKLTHVA 254
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL- 240
F +AVL+TNQV + + G + L G + GR P G A+ +R+ L
Sbjct: 255 EEFNVAVLLTNQV----QSDPGASALFAG------ADGRK--PVGGHILAHASATRILLR 302
Query: 241 -SRNEDFVVR 249
R E+ V +
Sbjct: 303 KGRGEERVAK 312
>gi|167391058|ref|XP_001739621.1| meiotic recombination protein dmc1 [Entamoeba dispar SAW760]
gi|165896627|gb|EDR23978.1| meiotic recombination protein dmc1, putative [Entamoeba dispar
SAW760]
Length = 347
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 20/226 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G D+ LGGGI S+TE+ E +GKTQ C L ++ QLPS G + Y+
Sbjct: 109 KITTGSSQFDQLLGGGIETMSVTEMFGEFRTGKTQLCHTLAVTTQLPSHLKGGNGKVAYI 168
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ F + D I + ++ +Q D++ ++ + +
Sbjct: 169 DTEGTFRPERITQIAERF-GVDQTAVLDNILIARAYTHEQQFDLLIEVAARMAEDH---- 223
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
R+++IDS+ +LFR DF +L +R K+ L ++ F +AV++TNQV +
Sbjct: 224 -FRILIIDSVTSLFRVDFSG-RGELSERQQKLGKMMNKLIKISEEFNVAVVITNQV--MS 279
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
+P G ++ P P G A+ +RL+L + +
Sbjct: 280 DPGG----------GAMFVVD-PKKPIGGHVIAHASTTRLYLRKGK 314
>gi|67482461|ref|XP_656580.1| Meiotic recombination protein DMC1 [Entamoeba histolytica
HM-1:IMSS]
gi|56473788|gb|EAL51192.1| Meiotic recombination protein DMC1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449704808|gb|EMD44979.1| meiotic recombination protein DMC1, putative [Entamoeba histolytica
KU27]
Length = 347
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 20/226 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G D+ LGGGI S+TE+ E +GKTQ C L ++ QLPS G + Y+
Sbjct: 109 KITTGSSQFDQLLGGGIETMSVTEMFGEFRTGKTQLCHTLAVTTQLPSHLKGGNGKVAYI 168
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ F + D I + ++ +Q D++ ++ + +
Sbjct: 169 DTEGTFRPERIAQIAERF-GVDQTAVLDNILIARAYTHEQQFDLLIEVAARMAEDH---- 223
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
R+++IDS+ +LFR DF +L +R K+ L ++ F +AV++TNQV +
Sbjct: 224 -FRMLIIDSVTSLFRVDFSG-RGELSERQQKLGKMMNKLIKISEEFNVAVVITNQV--MS 279
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
+P G ++ P P G A+ +RL+L + +
Sbjct: 280 DPGG----------GAMFVVD-PKKPIGGHVIAHASTTRLYLRKGK 314
>gi|68076139|ref|XP_679989.1| meiotic recombination protein dmc1-like protein, [Plasmodium
berghei strain ANKA]
gi|56500849|emb|CAH94824.1| meiotic recombination protein dmc1-like protein, putative
[Plasmodium berghei]
Length = 345
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 130/299 (43%), Gaps = 51/299 (17%)
Query: 3 APMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSA 62
A +T L+ K T G ++D+ LGGG SITEL E+ GKTQ C L ++A
Sbjct: 91 AFITGNQLVQKRSKVLKITTGSSVLDKTLGGGFESMSITELFGENRCGKTQVCHTLAVTA 150
Query: 63 QLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDI 122
QLP + G + Y+ TE F ++ +++ F N + D I + + L +
Sbjct: 151 QLPKNMQGGNGKVCYIDTEGTFRPEKICKIAQRF-GLNSEDVLDNILYARAFTHEHLYQL 209
Query: 123 MPKIESFIKNSSNSRL---PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKA 179
+ +S +++ P L+V+DSI +LFR DF +L +R KI +L
Sbjct: 210 LA--------TSAAKMCEEPFALLVVDSIISLFRVDFSG-RGNLSERQQKLNKIMSVLSK 260
Query: 180 MAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLF 239
+ F +A+++TNQV+ + G + N P+ P G + +RL
Sbjct: 261 LGEQFNIAIVITNQVM----SDPGATMTFIAN---------PMKPVGGHVIGHASTTRLS 307
Query: 240 LSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
L + G G + VC+ V AP+L + C F+++ GV
Sbjct: 308 LRK-----------------GKGDQR-VCK-------VYDAPNLPEIECIFQLSDGGVI 341
>gi|407044782|gb|EKE42819.1| meiotic recombinase Dmc1 protein [Entamoeba nuttalli P19]
Length = 347
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 20/226 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G D+ LGGGI S+TE+ E +GKTQ C L ++ QLPS G + Y+
Sbjct: 109 KITTGSSQFDQLLGGGIETMSVTEMFGEFRTGKTQLCHTLAVTTQLPSHLKGGNGKVAYI 168
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ F + D I + ++ +Q D++ ++ + +
Sbjct: 169 DTEGTFRPERIAQIAERF-GVDQTAVLDNILIARAYTHEQQFDLLIEVAARMAEDH---- 223
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
R+++IDS+ +LFR DF +L +R K+ L ++ F +AV++TNQV +
Sbjct: 224 -FRMLIIDSVTSLFRVDFSG-RGELSERQQKLGKMMNKLIKISEEFNVAVVITNQV--MS 279
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
+P G ++ P P G A+ +RL+L + +
Sbjct: 280 DPGG----------GAMFVVD-PKKPIGGHVIAHASTTRLYLRKGK 314
>gi|170584581|ref|XP_001897076.1| DNA repair protein RAD51 homolog 1 [Brugia malayi]
gi|158595535|gb|EDP34081.1| DNA repair protein RAD51 homolog 1, putative [Brugia malayi]
Length = 363
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 11/184 (5%)
Query: 23 GCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEF 82
G +DR LGGG+ SITE+ E +GK+Q C L + QLP GG L++ TE
Sbjct: 125 GSRELDRLLGGGVETGSITEIFGEFRTGKSQLCHTLAVMCQLPVDMGGAEGKCLWIDTEG 184
Query: 83 PFPMRRLHQLS--HTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
F RL ++ H P + D + ++ D + ++ + + + S +
Sbjct: 185 TFRPERLLAVAERHKLSP---QDVLDNVVYARCYNTDHQMQLLVQASAMMAESRYA---- 237
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+V+DS +LFR+DF +L R + K ML ++ FG+AV++TNQVV ++
Sbjct: 238 -LLVVDSATSLFRTDFSGR-GELASRQMMLAKYLRMLLKLSDEFGVAVVITNQVVSQVDA 295
Query: 201 NEGV 204
G+
Sbjct: 296 GCGM 299
>gi|347968908|ref|XP_003436320.1| AGAP013412-PA [Anopheles gambiae str. PEST]
gi|333467786|gb|EGK96693.1| AGAP013412-PA [Anopheles gambiae str. PEST]
Length = 339
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ LGGGI SITE+ E +GKTQ C L ++ QLP S G LY+
Sbjct: 101 QLTTGSKELDKLLGGGIETGSITEIFGEFRTGKTQLCHTLAVTCQLPVSQNGGEGKCLYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL + ++ + D + ++ D + ++ + + S +
Sbjct: 161 DTEGTFRPERLLATAERYKLVG-ADVLDNVAYARAYNTDHQMHLLMVASAMMAESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
LI++DS +L+R+D+ +L R K ML +A FG+AVL+TNQVV
Sbjct: 218 ---LIIVDSATSLYRTDYSG-RGELAARQTHLAKFLRMLLRLADEFGVAVLITNQVV 270
>gi|162457755|ref|NP_001104918.1| DNA repair protein RAD51 homolog A [Zea mays]
gi|55976364|sp|Q67EU8.2|R51A1_MAIZE RecName: Full=DNA repair protein RAD51 homolog A; AltName:
Full=Rad51-like protein A; Short=RAD51A; AltName:
Full=ZmRAD51a
gi|4886752|gb|AAD32029.1|AF079428_1 RAD51 homolog RAD51A [Zea mays]
Length = 340
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 125/283 (44%), Gaps = 45/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E SGKTQ C ++ QLP GG +LY+
Sbjct: 102 QVTTGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTPCVTCQLPLDQGGGEGKALYI 161
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F N + + + ++ D ++ + S + + +
Sbjct: 162 DAEGTFRPQRLLQIADRF-GLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFA-- 218
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+V+DS AL+R+DF +L R K L+ +A FG+AV++TNQVV +
Sbjct: 219 ---LMVVDSATALYRTDFSGR-GELSARQMHMAKFLRSLQKLADEFGVAVVITNQVVAQV 274
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G +G P G A+ +RL L +
Sbjct: 275 D-------------GSAMFAGPQFKPIGGNIMAHASTTRLALRK---------------- 305
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G G E+ +C+ V+ +P LA+ F++ EG+ V+
Sbjct: 306 -GRG-EERICK-------VISSPCLAEAEARFQLASEGIADVK 339
>gi|440802621|gb|ELR23550.1| meiotic recombinase Dmc1, putative [Acanthamoeba castellanii str.
Neff]
Length = 353
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 131/293 (44%), Gaps = 45/293 (15%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT +L+ + T+GC +D+ LGGG+ SITE+ E +GKTQ C L ++ QL
Sbjct: 101 MTGSEMLNKRKEVVRITMGCTALDQLLGGGVETMSITEVFGEFRTGKTQLCHTLCVTTQL 160
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMP 124
P + G + Y+ TE F R+ ++ F + D I + + L+++
Sbjct: 161 PLNMSGGNGKVAYIDTEGTFRPERIKPIAERF-GLDPMAALDNIVYARAFTHEHQLELIV 219
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
+I + + RL+++DSI ALFR D+ +L +R ++ L+ +A F
Sbjct: 220 QIAAKMVEDQ-----YRLLIVDSITALFRVDYSGR-GELAERQQKLGRMLSKLQKIAEEF 273
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
+AV +TNQV +P G + + +PI G A+ +RL L +
Sbjct: 274 NVAVFITNQVT--ADPG--------GGAMFVADAKKPIG---GHVLAHASTTRLSLRK-- 318
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
G G E +C+ + +P L +T C ++I+ EG+
Sbjct: 319 ---------------GRG-EQRICK-------IFDSPCLPETECVYQISNEGI 348
>gi|355758569|gb|EHH61497.1| hypothetical protein EGM_21060, partial [Macaca fascicularis]
Length = 253
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 92/166 (55%), Gaps = 6/166 (3%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP+ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTHMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L +++ +IES + + IRL+
Sbjct: 150 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIISK--GIRLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAV 188
+IDS+A++ R +FD + +LK+R+ + + LK +A F + V
Sbjct: 208 IIDSVASVVRKEFDTQLQGNLKERNKFLAREACSLKYLAEEFSIPV 253
>gi|255937411|ref|XP_002559732.1| Pc13g13180 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584352|emb|CAP92387.1| Pc13g13180 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 523
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 98/182 (53%), Gaps = 5/182 (2%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P +D LGGGIP +TE+ ESGSGKTQF L L L+ QLP GL ++Y+ TE
Sbjct: 111 PAMDALLGGGIPTGYVTEVTGESGSGKTQFLLSLCLAVQLPKPQ-GLQRRAIYISTEHSL 169
Query: 85 PMRRLHQLSHTFRPSNDHNPCDYI-FVQSVHSVDQL-LDIMPKIESFIKNSSNSRLPIRL 142
RL Q+ P P + +Q + S++ + L+ I ++ + R I L
Sbjct: 170 STPRLSQILECH-PVLSTLPAEQTPSLQDILSINAMDLESQDHILNYHLPVAIERYDIGL 228
Query: 143 IVIDSIAALFRSDFD-NTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPN 201
++IDSI + +R++ + N++ KRS K+ +L+ +AV +A+++ NQV D E
Sbjct: 229 VIIDSITSNYRAEHESNSLQANAKRSSELAKLGHLLRNLAVKEDIAIVLANQVSDRFESL 288
Query: 202 EG 203
+G
Sbjct: 289 KG 290
>gi|115437842|ref|NP_001043394.1| Os01g0578000 [Oryza sativa Japonica Group]
gi|13161340|dbj|BAB32931.1| DNA repair protein radA (radA)-like [Oryza sativa Japonica Group]
gi|20521295|dbj|BAB91810.1| DNA repair protein radA (radA)-like [Oryza sativa Japonica Group]
gi|113532925|dbj|BAF05308.1| Os01g0578000 [Oryza sativa Japonica Group]
gi|215686387|dbj|BAG87648.1| unnamed protein product [Oryza sativa Japonica Group]
gi|343466352|gb|AEM43048.1| RAD51C-1 [Oryza sativa]
Length = 349
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 116/254 (45%), Gaps = 44/254 (17%)
Query: 9 NLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSH 68
++L + + G ++ LGGGI C +TE+ G GKTQ +QL ++ Q+P +
Sbjct: 79 DMLSDEQSRRHINTGSADLNNILGGGIHCKEVTEIGGVPGVGKTQLGIQLAINVQIPVEY 138
Query: 69 GGLSASSLYLHTEFPFPMRRLHQLS--------------HTFRPSNDHNPCDYIFVQSVH 114
GGL ++Y+ TE F + R++Q++ H P+ F+ ++
Sbjct: 139 GGLGGKAVYIDTEGSFMVERVYQIAEGCISDILEYFPHCHDKAPAGQEKLKPESFLADIY 198
Query: 115 -----SVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFL 169
S + + ++ +E F+ + +R+++IDS+ FR DF DD+ R+ +
Sbjct: 199 YFRICSYTEQIAVINYLEKFLGEHKD----VRIVIIDSVTFHFRQDF----DDMALRTRV 250
Query: 170 FFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIA 229
+S L ++ + LAV++ NQV + EG L + ALG +
Sbjct: 251 LSGLSLKLMKLSKAYNLAVVLLNQVT--TKFTEGSFQLTL---------------ALGDS 293
Query: 230 WANCVNSRLFLSRN 243
W++ +RL L N
Sbjct: 294 WSHSCTNRLILYWN 307
>gi|326427949|gb|EGD73519.1| rad51 protein [Salpingoeca sp. ATCC 50818]
Length = 332
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 23 GCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEF 82
G +D L GGI SITE+ E +GKTQ C L ++ QLP GG LY+ TE
Sbjct: 98 GSKELDTLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGAEGKCLYIDTEG 157
Query: 83 PFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRL 142
F RL ++ + S + + D + ++ D + ++ + + + S + L
Sbjct: 158 TFRPERLLAVAERYGLSGE-DVLDNVAYARAYNSDHQMHLLQQASAMMAESRYA-----L 211
Query: 143 IVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNE 202
+V+DS ALFR+D+ +L R + L +A FG+AV++TNQVV ++
Sbjct: 212 MVVDSATALFRTDYSGR-GELSARQMALAQFLRTLMRLADEFGIAVVITNQVVAQVD--- 267
Query: 203 GVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
G + P P G A+ +RL+L +
Sbjct: 268 ----------GAAMFAADPKKPIGGNIMAHASTTRLYLRK 297
>gi|355754048|gb|EHH58013.1| hypothetical protein EGM_07774, partial [Macaca fascicularis]
Length = 374
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 111/259 (42%), Gaps = 45/259 (17%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGG+P TE+ G GKTQ C+QL +
Sbjct: 80 GKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVD 139
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDH-------------- 102
Q+P GG++ ++++ TE F + R+ L+ H + H
Sbjct: 140 VQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTL 199
Query: 103 -NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
N +I+ +LL + + F+ S +RL+++D IA FR D +D
Sbjct: 200 DNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSK----VRLVIVDGIAFPFRHD----LD 251
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL R+ L ++ + ++A LAV++TNQ+ ++ N+ +
Sbjct: 252 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQAL----------------- 294
Query: 222 ICPALGIAWANCVNSRLFL 240
+ PALG +W + RL
Sbjct: 295 LVPALGESWGHAATIRLIF 313
>gi|222618725|gb|EEE54857.1| hypothetical protein OsJ_02328 [Oryza sativa Japonica Group]
Length = 349
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 116/254 (45%), Gaps = 44/254 (17%)
Query: 9 NLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSH 68
++L + + G ++ LGGGI C +TE+ G GKTQ +QL ++ Q+P +
Sbjct: 79 DMLSDEQSRRHINTGSADLNNILGGGIHCKEVTEIGGVPGVGKTQLGIQLAINVQIPVEY 138
Query: 69 GGLSASSLYLHTEFPFPMRRLHQLS--------------HTFRPSNDHNPCDYIFVQSVH 114
GGL ++Y+ TE F + R++Q++ H P+ F+ ++
Sbjct: 139 GGLGGKAVYIDTEGSFMVERVYQIAEGCISDILEYFPHCHDKAPAGQEKLKPESFLADIY 198
Query: 115 -----SVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFL 169
S + + ++ +E F+ + +R+++IDS+ FR DF DD+ R+ +
Sbjct: 199 YFRICSYTEQIAVINYLEKFLGEHKD----VRIVIIDSVTFHFRQDF----DDMALRTRV 250
Query: 170 FFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIA 229
+S L ++ + LAV++ NQV + EG L + ALG +
Sbjct: 251 LSGLSLKLMKLSKAYNLAVVLLNQVT--TKFTEGSFQLTL---------------ALGDS 293
Query: 230 WANCVNSRLFLSRN 243
W++ +RL L N
Sbjct: 294 WSHSCTNRLILYWN 307
>gi|403356083|gb|EJY77631.1| hypothetical protein OXYTRI_00735 [Oxytricha trifallax]
Length = 256
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
+ G +D LGGG+ SITE+ E +GKTQ C L ++ QLP S GG + ++Y+ T
Sbjct: 20 STGSKGLDTLLGGGMETGSITEIFGEFRTGKTQICHTLCVTCQLPVSQGGGAGMAMYIDT 79
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + ++ D + H+ DQ ++ + + + SR
Sbjct: 80 EGTFRPERLIPIAKRY-GLDEQKVLDNVAYARAHNTDQQNKLLMQAAALM---CESRFA- 134
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+D+ +L R K L+ +A FG+AV++TNQVV
Sbjct: 135 -LLIVDSATALYRTDYSG-RGELSARQMSLAKFLRQLQRLADEFGVAVVITNQVV 187
>gi|218188518|gb|EEC70945.1| hypothetical protein OsI_02540 [Oryza sativa Indica Group]
Length = 349
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 116/254 (45%), Gaps = 44/254 (17%)
Query: 9 NLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSH 68
++L + + G ++ LGGGI C +TE+ G GKTQ +QL ++ Q+P +
Sbjct: 79 DMLSDEQSRRHINTGSADLNNILGGGIHCKEVTEIGGVPGVGKTQLGIQLAINVQIPVEY 138
Query: 69 GGLSASSLYLHTEFPFPMRRLHQLS--------------HTFRPSNDHNPCDYIFVQSVH 114
GGL ++Y+ TE F + R++Q++ H P+ F+ ++
Sbjct: 139 GGLGGKAVYIDTEGSFMVERVYQIAEGCISDILEYFPHCHDKAPAGQEKLKPESFLADIY 198
Query: 115 -----SVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFL 169
S + + ++ +E F+ + +R+++IDS+ FR DF DD+ R+ +
Sbjct: 199 YFRICSYTEQIAVINYLEKFLGEHKD----VRIVIIDSVTFHFRQDF----DDMALRTRV 250
Query: 170 FFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIA 229
+S L ++ + LAV++ NQV + EG L + ALG +
Sbjct: 251 LSGLSLKLMKLSKAYNLAVVLLNQVT--TKFTEGSFQLTL---------------ALGDS 293
Query: 230 WANCVNSRLFLSRN 243
W++ +RL L N
Sbjct: 294 WSHSCTNRLILYWN 307
>gi|357588408|ref|NP_001239491.1| DNA repair protein RAD51 homolog 2 isoform 2 [Mus musculus]
gi|12854237|dbj|BAB29970.1| unnamed protein product [Mus musculus]
gi|148670700|gb|EDL02647.1| RAD51-like 1 (S. cerevisiae), isoform CRA_a [Mus musculus]
Length = 258
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 94/166 (56%), Gaps = 6/166 (3%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+PC S+TE+ G GKTQFC+ +++ A LP+S GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVPCGSLTEITGPPGCGKTQFCIMMSVLATLPTSLGGLEGAVVYIDTESAFTA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L ++ ++ES + + ++L+
Sbjct: 150 ERLVEIAESRFPQYFNTEEKLLLTSSRVHLCRELTCEGLLQRLESLEEEIISK--GVKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAV 188
++DSIA++ R +FD + ++K+R+ K + +LK +A F + V
Sbjct: 208 IVDSIASVVRKEFDPKLQGNIKERNKFLGKGASLLKYLAGEFSIPV 253
>gi|380796657|gb|AFE70204.1| DNA repair protein RAD51 homolog 3 isoform 1, partial [Macaca
mulatta]
Length = 374
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 111/259 (42%), Gaps = 45/259 (17%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGG+P TE+ G GKTQ C+QL +
Sbjct: 80 GKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVD 139
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDH-------------- 102
Q+P GG++ ++++ TE F + R+ L+ H + H
Sbjct: 140 VQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTL 199
Query: 103 -NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
N +I+ +LL + + F+ S +RL+++D IA FR D +D
Sbjct: 200 DNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSK----VRLVIVDGIAFPFRHD----LD 251
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL R+ L ++ + ++A LAV++TNQ+ ++ N+ +
Sbjct: 252 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQAL----------------- 294
Query: 222 ICPALGIAWANCVNSRLFL 240
+ PALG +W + RL
Sbjct: 295 LVPALGESWGHAATIRLIF 313
>gi|4996226|dbj|BAA78377.1| Rad51 [Cynops pyrrhogaster]
Length = 337
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 99 QVTTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYI 158
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 159 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARAFNTDHQTQLLYQASAMMAESRYA-- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 216 ---LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 271
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 272 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 302
>gi|20092352|ref|NP_618427.1| DNA repair and recombination protein RadA [Methanosarcina
acetivorans C2A]
gi|34395790|sp|Q8TK71.1|RADA_METAC RecName: Full=DNA repair and recombination protein RadA
gi|19917601|gb|AAM06907.1| DNA repair protein [Methanosarcina acetivorans C2A]
Length = 325
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 113/247 (45%), Gaps = 42/247 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T GC D +GGGI SITEL E GSGKTQ QL ++ Q+ HGGL S + +
Sbjct: 81 KLTTGCVEFDEMMGGGIETQSITELYGEFGSGKTQVAHQLAVNVQMDKEHGGLDGSVIII 140
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHS------------VDQLLDIMPKI 126
TE F R+ Q+ F+Q++H VD D+ ++
Sbjct: 141 DTENTFRPERITQMVKGLSEKYGMELDPEEFLQNIHVARAYNSNHQILLVDSATDLANEL 200
Query: 127 ESFIKNSSNSRLPIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLKAMAVGF 184
+ K P+RL+++DS+ A FR+++ T+ D +++ L + G+L+ + F
Sbjct: 201 KEMGK-------PVRLLIVDSLMAHFRAEYVGRGTLADRQQK--LNKHMHGLLRFGDL-F 250
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL--SR 242
V+VTNQV + +P+ + G P P G + RL+L S+
Sbjct: 251 NACVVVTNQV--MAKPD------------AFF--GDPTRPVGGHIVGHTATFRLYLRKSK 294
Query: 243 NEDFVVR 249
E ++R
Sbjct: 295 GEKRIIR 301
>gi|307352867|ref|YP_003893918.1| DNA repair and recombination protein RadA [Methanoplanus
petrolearius DSM 11571]
gi|307156100|gb|ADN35480.1| DNA repair and recombination protein RadA [Methanoplanus
petrolearius DSM 11571]
Length = 323
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 4/189 (2%)
Query: 9 NLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSH 68
++L+ K T P D +GGG+ SI E E GSGK+Q Q+ ++AQLP
Sbjct: 71 DVLEERKKVRKLTTFVPEFDALMGGGLETMSIIEFYGEFGSGKSQIAHQMAVNAQLPEDV 130
Query: 69 GGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNP---CDYIFVQSVHSVDQLLDIMPK 125
GGL+ S +Y+ TE F R+ Q+ + +P ++I V + D + ++
Sbjct: 131 GGLNGSVIYIDTENTFRPERIRQMVEGLDLEDVPSPEEFLEHIHVAEAFTSDHQMLLLDN 190
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ + P++LIV+DS+ A FR+++ L R K L +A F
Sbjct: 191 VRELAAELKETDKPLKLIVVDSLMAHFRAEYAGR-GTLSLRQQKLNKHMYDLAKLAKEFN 249
Query: 186 LAVLVTNQV 194
V+VTNQV
Sbjct: 250 AVVIVTNQV 258
>gi|297272693|ref|XP_001104781.2| PREDICTED: DNA repair protein RAD51 homolog 3-like [Macaca mulatta]
Length = 337
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 45/258 (17%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGG+P TE+ G GKTQ C+QL +
Sbjct: 73 GKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVD 132
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDH-------------- 102
Q+P GG++ ++++ TE F + R+ L+ H + H
Sbjct: 133 VQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTL 192
Query: 103 -NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
N +I+ +LL + + F+ S +RL+++D IA FR D +D
Sbjct: 193 DNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSK----VRLVIVDGIAFPFRHD----LD 244
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL R+ L ++ + ++A LAV++TNQ+ ++ N+ +
Sbjct: 245 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQAL----------------- 287
Query: 222 ICPALGIAWANCVNSRLF 239
+ PALG +W + RL
Sbjct: 288 LVPALGESWGHAATIRLI 305
>gi|355568579|gb|EHH24860.1| hypothetical protein EGK_08587 [Macaca mulatta]
Length = 367
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 111/259 (42%), Gaps = 45/259 (17%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGG+P TE+ G GKTQ C+QL +
Sbjct: 73 GKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVD 132
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDH-------------- 102
Q+P GG++ ++++ TE F + R+ L+ H + H
Sbjct: 133 VQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTL 192
Query: 103 -NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
N +I+ +LL + + F+ S +RL+++D IA FR D +D
Sbjct: 193 DNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSK----VRLVIVDGIAFPFRHD----LD 244
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL R+ L ++ + ++A LAV++TNQ+ ++ N+ +
Sbjct: 245 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQAL----------------- 287
Query: 222 ICPALGIAWANCVNSRLFL 240
+ PALG +W + RL
Sbjct: 288 LVPALGESWGHAATIRLIF 306
>gi|395748906|ref|XP_003778851.1| PREDICTED: DNA repair protein RAD51 homolog 3 isoform 2 [Pongo
abelii]
Length = 337
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 45/258 (17%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGG+P TE+ G GKTQ C+QL +
Sbjct: 73 GKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVD 132
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDH-------------- 102
Q+P GG++ ++++ TE F + R+ L+ H + H
Sbjct: 133 VQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTL 192
Query: 103 -NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
N +I+ +LL + + F+ S +RL+++D IA FR D +D
Sbjct: 193 DNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSK----VRLVIVDGIAFPFRHD----LD 244
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL R+ L ++ + ++A LAV++TNQ+ ++ N+ +
Sbjct: 245 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQAL----------------- 287
Query: 222 ICPALGIAWANCVNSRLF 239
+ PALG +W + RL
Sbjct: 288 LVPALGESWGHAATIRLI 305
>gi|390343400|ref|XP_788113.2| PREDICTED: DNA repair protein RAD51 homolog 3-like isoform 2
[Strongylocentrotus purpuratus]
Length = 415
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 128/292 (43%), Gaps = 64/292 (21%)
Query: 24 CPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFP 83
C +D LGGG+P ITE+ G GKTQ C+QL + Q+P+S GG+ ++Y+ TE
Sbjct: 127 CEELDEMLGGGVPMCKITEICGAPGVGKTQTCIQLCVDVQIPASLGGVEGEAVYIDTEGS 186
Query: 84 FPMRRLHQLS-----HTFRPSNDHNPCDY--------IFVQSVHSVDQLLDIMPKIESFI 130
F +R ++ H + D+ I H+ +LL ++ + F+
Sbjct: 187 FIPQRAWGIAQAATEHCHTMGDQAELKDFTTEKILSGIHYFRCHNHVELLALVNLLPEFL 246
Query: 131 KNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLV 190
S N + ++LI++DSIA FR DF DD+ R+ L ++ +A + LAV++
Sbjct: 247 --SKNPK--VKLIIVDSIAFHFRHDF----DDMSLRTRLLNGLAQNFIRIATQYNLAVVL 298
Query: 191 TNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRE 250
TNQ+ + EG + L PALG +W + R+ L
Sbjct: 299 TNQMTTKI--GEGTSHL---------------IPALGESWGHACTIRVIL---------- 331
Query: 251 NQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVER 302
++ +R ++ +P + + ++IT+ GV + R
Sbjct: 332 ----------------YWKQAQRYANLYKSPSKQEATVPYQITQAGVRSISR 367
>gi|320170723|gb|EFW47622.1| Rad51 protein [Capsaspora owczarzaki ATCC 30864]
Length = 337
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 20/222 (9%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GG +ITE+ E +GKTQ C L ++ QLP+S GG LY+ T
Sbjct: 101 TSGSKELDKLLQGGFETGAITEIFGEFRTGKTQICHTLAVTCQLPTSQGGGEGKCLYIDT 160
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL + + S + D + ++ D L ++ + + + S +
Sbjct: 161 EGTFRPERLLAAAERYGLSGP-DVLDNVAYARAYNTDHQLALLMQASAMMAESRYA---- 215
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+++DS AL+R+D+ +L R K L +A FG+AV+VTNQVV
Sbjct: 216 -LLIVDSATALYRTDYSGR-GELSARQMHLAKFMRSLLRLADEFGIAVVVTNQVV----- 268
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
V+G G ++++ P P G A+ +RL+L +
Sbjct: 269 -AQVDG------GAMFAAD-PKKPIGGNIMAHASTTRLYLRK 302
>gi|340714319|ref|XP_003395677.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Bombus
terrestris]
gi|350417329|ref|XP_003491369.1| PREDICTED: DNA repair protein RAD51 homolog 1-like isoform 1
[Bombus impatiens]
gi|350417331|ref|XP_003491370.1| PREDICTED: DNA repair protein RAD51 homolog 1-like isoform 2
[Bombus impatiens]
Length = 341
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 19/222 (8%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +DR LGGGI SITE+ E SGKTQ C L ++ QLP GG LY+ T
Sbjct: 104 TTGSSELDRLLGGGIETGSITEIFGEFRSGKTQLCHTLAVNCQLPIDMGGAEGKCLYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ ++ + D + D + ++ D ++ + + + S +
Sbjct: 164 EGTFRPERLIAVAERYKIAGD-SVLDNVACARAYNTDHQTQLLIQASAMMTESRYA---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+++DS L+R+++ +L R + ML +A G+AV++TNQVV ++
Sbjct: 219 -LLIVDSATGLYRTEYSG-RGELAARQMHLGRFLRMLLRLADEHGVAVVITNQVVAQVDG 276
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G G P G A+ +RL+L +
Sbjct: 277 AASMFG------------GDQKKPIGGHILAHASTTRLYLRK 306
>gi|123402061|ref|XP_001301981.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121883224|gb|EAX89051.1| hypothetical protein TVAG_144570 [Trichomonas vaginalis G3]
Length = 328
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 37/269 (13%)
Query: 35 IPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSH 94
IP N I E +G GK+ L ++ + + + + TE P +RLH+++
Sbjct: 92 IPKNGIIEFTGPAGCGKSNIIYHLLINQIISDPERRV----VLISTEGHVPTQRLHKIAE 147
Query: 95 TFRPSNDHNPCDYIFVQSVHSV---DQLLDI-MPKIESFIKNSSNSRLPIRLIVIDSIAA 150
R + I ++ V +Q++++ +P++ S P ++ IDSIAA
Sbjct: 148 -MRGLDPEEVLSMILIKEATEVVEFNQIINVTLPQL------FSTCVPPPSIVAIDSIAA 200
Query: 151 LFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVG 210
LFRS+FD M+ K+R+ + F +S +LK ++ + + TNQV
Sbjct: 201 LFRSEFD--MNAAKQRAQMLFDMSTILKWISASYNCLIFTTNQVT--------------A 244
Query: 211 NLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRR 270
N+G + + P+LG+AW+NCVN R+ ++++ + R+ Q G SE
Sbjct: 245 NMGPF--TTQEWVPSLGLAWSNCVNMRVRVTKSS--MKRDIQEEVPTAYGRNSESKTV-- 298
Query: 271 TRRSLHVVFAPHLADTSCEFEITREGVFG 299
T R+++V +P D F I+ GV G
Sbjct: 299 TLRTMYVEISPRAQDVKATFYISDSGVHG 327
>gi|30578205|gb|AAP35099.1|AF485820_1 DMC1 [Entamoeba histolytica]
Length = 334
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 20/226 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G D+ LGGGI S+TE+ E +GKTQ C L ++ QLPS G + Y+
Sbjct: 96 KITTGSSQFDQLLGGGIETMSVTEMFGEFRTGKTQLCHTLAVTTQLPSHLKGGNGKVAYI 155
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ F + D I + ++ +Q D++ ++ + +
Sbjct: 156 DTEGTFRPERIAQIAERF-GVDQTAVLDNILIARAYTHEQQFDLLIEVAARMAEDH---- 210
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
R+++IDS+ +LFR DF +L +R K+ L ++ F +AV++TNQV +
Sbjct: 211 -FRMLIIDSVTSLFRVDFSGR-GELSERQQKLGKMMNKLIKISEEFNVAVVITNQV--MS 266
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
+P G ++ P P G A+ +RL+L + +
Sbjct: 267 DPGG----------GAMFVVD-PKKPIGGHVIAHASTTRLYLRKGK 301
>gi|403374245|gb|EJY87063.1| Rad51 [Oxytricha trifallax]
Length = 352
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
+ G +D LGGG+ SITE+ E +GKTQ C L ++ QLP S GG + ++Y+ T
Sbjct: 116 STGSKGLDTLLGGGMETGSITEIFGEFRTGKTQICHTLCVTCQLPVSQGGGAGMAMYIDT 175
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + ++ D + H+ DQ ++ + + + SR
Sbjct: 176 EGTFRPERLIPIAKRY-GLDEQKVLDNVAYARAHNTDQQNKLLMQAAALM---CESRFA- 230
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+D+ +L R K L+ +A FG+AV++TNQVV
Sbjct: 231 -LLIVDSATALYRTDYSGR-GELSARQMSLAKFLRQLQRLADEFGVAVVITNQVV 283
>gi|240278866|gb|EER42372.1| RecA family ATPase Rhp57 [Ajellomyces capsulatus H143]
gi|325090124|gb|EGC43434.1| RecA family ATPase Rhp57 [Ajellomyces capsulatus H88]
Length = 701
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 97/188 (51%), Gaps = 24/188 (12%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P++DR L GGI +TEL ESG GKTQF L L LS QLP + G S +LYL TE
Sbjct: 178 PVLDRVLAGGISTGYVTELAGESGCGKTQFLLHLLLSVQLPPPY-GTSQKALYLSTESNL 236
Query: 85 PMRRLHQLSHTF-----------RPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNS 133
P RL QL RPS ++ + S+ ++D L+ I ++
Sbjct: 237 PTNRLSQLLEEHPVISTLPEGSPRPSLEN-------ILSITTID--LESQDHILNYQIPV 287
Query: 134 SNSRLPIRLIVIDSIAALFR--SDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVT 191
+ SR I L+VIDSI A +R SD DN L R++ K+ L+ +A +A++V
Sbjct: 288 AVSRYNIGLVVIDSITANYRAESDLDNVA-GLLARAWQLKKLGQFLRNLAAKQNIAIVVA 346
Query: 192 NQVVDLME 199
NQV D ++
Sbjct: 347 NQVSDRIQ 354
>gi|327280164|ref|XP_003224823.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Anolis
carolinensis]
Length = 339
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARAFNTDHQTQLLYQASAMMTESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 218 ---LLIVDSATALYRTDYSG-RGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 274 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 304
>gi|298715571|emb|CBJ28124.1| rad51 homolog C [Ectocarpus siliculosus]
Length = 344
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 47/240 (19%)
Query: 24 CPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFP 83
C ID +GGG+P +TE+ G GKTQF +QL + Q+P GG+ +LY+ TE
Sbjct: 43 CREIDGMMGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVGGGALYIDTEGS 102
Query: 84 FPMRRLHQL-----SHTFRPSNDHN-----------PCDYIFVQSVH------SVDQLLD 121
+ RL QL H + + + P F+ +H +QL
Sbjct: 103 LTVERLSQLCSAVVEHLQKIARNKRKQGVPDLESAVPTQEAFLGGIHVWRLHDHAEQLAA 162
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ E + + ++L+V+DS+A FR F D+ R+ + +++ L +A
Sbjct: 163 VRTLPEFLVAHPE-----VKLVVMDSVAFHFRHAF----QDMSVRTRMLSRMAQQLNEVA 213
Query: 182 VGFGLAVLVTNQV-VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
LAV++ NQ+ +M + G + L PALG +WA+ +RL L
Sbjct: 214 QAHSLAVVLVNQMTTKVMTGHRGESSL---------------VPALGESWAHAATNRLLL 258
>gi|402899803|ref|XP_003912876.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Papio anubis]
Length = 337
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 45/258 (17%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGG+P TE+ G GKTQ C+QL +
Sbjct: 73 GKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVD 132
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDH-------------- 102
Q+P GG++ ++++ TE F + R+ L+ H + H
Sbjct: 133 VQIPECFGGVAGEAVFIDTEGSFMVGRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTL 192
Query: 103 -NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
N +I+ +LL + + F+ S +RL+++D IA FR D +D
Sbjct: 193 DNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSK----VRLVIVDGIAFPFRHD----LD 244
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL R+ L ++ + ++A LAV++TNQ+ ++ N+ +
Sbjct: 245 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQAL----------------- 287
Query: 222 ICPALGIAWANCVNSRLF 239
+ PALG +W + RL
Sbjct: 288 LVPALGESWGHAATIRLI 305
>gi|326919838|ref|XP_003206184.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Meleagris
gallopavo]
Length = 339
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITEL E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMAESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 218 ---LLIVDSATALYRTDYSG-RGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 274 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 304
>gi|297700682|ref|XP_002827366.1| PREDICTED: DNA repair protein RAD51 homolog 3 isoform 1 [Pongo
abelii]
Length = 443
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 111/259 (42%), Gaps = 45/259 (17%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGG+P TE+ G GKTQ C+QL +
Sbjct: 149 GKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVD 208
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDH-------------- 102
Q+P GG++ ++++ TE F + R+ L+ H + H
Sbjct: 209 VQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTL 268
Query: 103 -NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
N +I+ +LL + + F+ S +RL+++D IA FR D +D
Sbjct: 269 DNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSK----VRLVIVDGIAFPFRHD----LD 320
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL R+ L ++ + ++A LAV++TNQ+ ++ N+ +
Sbjct: 321 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQAL----------------- 363
Query: 222 ICPALGIAWANCVNSRLFL 240
+ PALG +W + RL
Sbjct: 364 LVPALGESWGHAATIRLIF 382
>gi|71018413|ref|XP_759437.1| DNA repair protein RAD51 [Ustilago maydis 521]
gi|2500102|sp|Q99133.1|RAD51_USTMA RecName: Full=DNA repair protein RAD51
gi|1480734|gb|AAC61878.1| Rad51 [Ustilago maydis]
gi|46099044|gb|EAK84277.1| RA51_USTMA DNA repair protein RAD51 [Ustilago maydis 521]
Length = 339
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGG+ SITEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 103 TTGSKNLDAILGGGMETGSITELYGEFRTGKSQLCHTLAVTCQLPVDMGGGEGKCLYIDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F N D + ++ D L ++ + + + S S
Sbjct: 163 ENTFRPTRLLAVAERF-GLNGEEVLDNVAYARAYNADHQLQLLMQASAMMAESRFS---- 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS+ +L+R+DF +L R K L +A FG+AV++TNQVV
Sbjct: 218 -LLIVDSLTSLYRTDFSGR-GELSARQMHLAKFLRGLMRLADEFGVAVVITNQVV 270
>gi|328788487|ref|XP_624827.3| PREDICTED: DNA repair protein RAD51 homolog 1 [Apis mellifera]
gi|380025667|ref|XP_003696590.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Apis florea]
Length = 341
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +DR LGGGI SITE+ E SGKTQ C L ++ QLP GG LY+ T
Sbjct: 104 TTGSSELDRLLGGGIETGSITEIFGEFRSGKTQLCHTLAVNCQLPIDMGGAEGKCLYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ ++ + D + D + ++ D ++ + + + S +
Sbjct: 164 EGTFRPERLIAVAERYKIAGD-SVLDNVACARAYNTDHQTQLLIQASAMMTESRYA---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS L+R+++ +L R + ML +A G+AV++TNQVV
Sbjct: 219 -LLIVDSATGLYRTEYSGR-GELAARQMHLGRFLRMLLRLADEHGVAVVITNQVV 271
>gi|344285345|ref|XP_003414422.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Loxodonta
africana]
Length = 445
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 45/263 (17%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGGIP TE+ G GKTQ C+QL +
Sbjct: 146 GKKCTALELLEQEHTQGFIITFCSALDNILGGGIPLTKTTEICGAPGVGKTQLCMQLAVD 205
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRR-----------LHQLSHTFRPSNDH-------- 102
Q+P GG++ ++++ TE F + R LH ++ T
Sbjct: 206 VQIPECFGGVAGEAVFIDTEGSFMIDRVVDLATACIQHLHLITGTHMEEEHQKALEDFTL 265
Query: 103 -NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
N +I+ +LL + + F+ S +RL+++D IA FR D +D
Sbjct: 266 ENILSHIYYFRCRDCTELLAQVYLLPDFLSEHSK----VRLVIVDGIAFPFRHD----LD 317
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL R+ L ++ + ++A LAV++TNQ+ ++ N+
Sbjct: 318 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQA-----------------S 360
Query: 222 ICPALGIAWANCVNSRLFLSRNE 244
+ PALG +W + R+ ++
Sbjct: 361 LIPALGESWGHAATIRIIFHWDQ 383
>gi|154288046|ref|XP_001544818.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408459|gb|EDN04000.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 587
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 98/188 (52%), Gaps = 24/188 (12%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P++DR L GGI +TEL ESG GKTQF L L LS QLP + G S +LYL TE
Sbjct: 116 PVLDRVLAGGISTGYVTELAGESGCGKTQFLLHLLLSVQLPPPY-GTSQKALYLSTESNL 174
Query: 85 PMRRLHQL--SHTF---------RPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNS 133
P RL QL H RPS ++ + S+ ++D L+ I ++
Sbjct: 175 PTNRLSQLLEEHPVISTLPEGSPRPSLEN-------ILSITTID--LESQDHILNYQIPV 225
Query: 134 SNSRLPIRLIVIDSIAALFR--SDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVT 191
+ SR I L+VIDSI A +R SD DN L R++ K+ L+ +A +A++V
Sbjct: 226 AVSRYNIGLVVIDSITANYRAESDLDNVA-GLLARAWQLKKLGQFLRNLAAKQNIAIVVA 284
Query: 192 NQVVDLME 199
NQV D ++
Sbjct: 285 NQVSDRIQ 292
>gi|225560118|gb|EEH08400.1| RecA family ATPase Rhp57 [Ajellomyces capsulatus G186AR]
Length = 655
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 98/188 (52%), Gaps = 24/188 (12%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P++DR L GGI +TEL ESG GKTQF L L LS QLP + G S +LYL TE
Sbjct: 184 PVLDRVLAGGISTGYVTELAGESGCGKTQFLLHLLLSVQLPPPY-GTSQKALYLSTESNL 242
Query: 85 PMRRLHQL--SHTF---------RPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNS 133
P RL QL H RPS ++ + S+ ++D L+ I ++
Sbjct: 243 PTNRLSQLLEEHPVISTLPEGSPRPSLEN-------ILSITTID--LESQDHILNYQIPV 293
Query: 134 SNSRLPIRLIVIDSIAALFR--SDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVT 191
+ SR I L+VIDSI A +R SD DN L R++ K+ L+ +A +A++V
Sbjct: 294 AVSRYNIGLVVIDSITANYRAESDLDNVA-GLLARAWQLKKLGQFLRNLAAKQNIAIVVA 352
Query: 192 NQVVDLME 199
NQV D ++
Sbjct: 353 NQVSDRIQ 360
>gi|332246456|ref|XP_003272370.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Nomascus leucogenys]
Length = 337
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 110/254 (43%), Gaps = 45/254 (17%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T LL+ T C +D LGGG+P TE+ G GKTQ C+QL + Q+P
Sbjct: 77 TALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIP 136
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDH---------------NPC 105
GG++ ++++ TE F + R+ L+ H + H N
Sbjct: 137 ECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLHLIAEKHKGEEHRKALEDFTLDNIL 196
Query: 106 DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKK 165
+I+ +LL + + F+ S +RL+++D IA FR D +DDL
Sbjct: 197 SHIYYFRCRDYTELLAQVYLLPDFLSEHSK----VRLVIVDGIAFPFRHD----LDDLSL 248
Query: 166 RSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPA 225
R+ L ++ + ++A LAV++TNQ+ ++ N+ + + PA
Sbjct: 249 RTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQAL-----------------LVPA 291
Query: 226 LGIAWANCVNSRLF 239
LG +W + RL
Sbjct: 292 LGESWGHAATIRLI 305
>gi|358396943|gb|EHK46318.1| hypothetical protein TRIATDRAFT_196126 [Trichoderma atroviride IMI
206040]
Length = 482
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 91/177 (51%), Gaps = 10/177 (5%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGG+P ITE ESG GKTQF L L L+ QLP H GL +LY+ TE
Sbjct: 127 LDAALGGGVPVGHITEFTGESGVGKTQFLLSLCLAVQLPPPH-GLGKQALYISTESGLTT 185
Query: 87 RRLHQL---SHTFRPSNDH-NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRL 142
RRL Q+ + R + + P + S + D L+ I + SR I +
Sbjct: 186 RRLAQMLQGNTILREAAESGTPASLDGIHSAVTPD--LETQDHILEYQVPVLLSRHEIGI 243
Query: 143 IVIDSIAALFRSDFDNT---MDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
++IDS+AA FR++F+ ++ RS ++ +L+ +A +AV+V NQV D
Sbjct: 244 LIIDSVAANFRAEFERQGSHGSNMATRSAELTRLGALLRDLARRHNIAVVVANQVAD 300
>gi|452821241|gb|EME28274.1| DNA repair protein [Galdieria sulphuraria]
Length = 365
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITEL E +GKTQ C L ++ QLP +GG +LY+ +
Sbjct: 129 TTGSQELDNLLAGGIETGSITELFGEFRTGKTQLCHTLCVTCQLPIENGGGEGKALYIDS 188
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R+ +S + N + + I V ++ D L ++ + + + S +
Sbjct: 189 EGTFRPERIVAISERY-GLNSEDVLNNIAVARAYNSDHQLQLLTQACALMAESRYA---- 243
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
LI++DS AL+R+D+ +L R + L+ +A FG+AV++TNQVV
Sbjct: 244 -LIIVDSATALYRTDYSG-RGELAARQQHMARFLRALQKLADEFGVAVVITNQVV----- 296
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
V+G G +++ P P G A+ +RL+L +
Sbjct: 297 -AQVDG------GAMFAVD-PKKPIGGNIIAHASQTRLYLRK 330
>gi|45384012|ref|NP_990504.1| DNA repair protein RAD51 homolog 1 [Gallus gallus]
gi|585770|sp|P37383.1|RAD51_CHICK RecName: Full=DNA repair protein RAD51 homolog 1
gi|299819|gb|AAB26354.1| homolog to S.cerevisiae [Gallus gallus]
Length = 339
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITEL E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMAESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 218 ---LLIVDSATALYRTDYSG-RGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 274 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 304
>gi|178056768|ref|NP_001116653.1| DNA repair protein RAD51 homolog 1 [Sus scrofa]
gi|167600352|gb|ABZ89107.1| Rad51 [Sus scrofa]
gi|168085455|dbj|BAG09486.1| DNA repair protein RAD51 [Sus scrofa]
Length = 339
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARAFNTDHQTQLLYQASAMMVESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L++IDS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 218 ---LLIIDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 274 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 304
>gi|21226559|ref|NP_632481.1| DNA repair and recombination protein RadA [Methanosarcina mazei
Go1]
gi|20904832|gb|AAM30153.1| recombination/repair protein RadA [Methanosarcina mazei Go1]
Length = 367
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 28/193 (14%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T GC D +GGGI +ITEL E GSGKTQ QL ++ Q+ HGGL S + +
Sbjct: 123 KLTTGCTEFDEMMGGGIETQAITELYGEFGSGKTQVAHQLAVNVQMDREHGGLGGSVIII 182
Query: 79 HTEFPFPMRRLHQLSHTF--RPSNDHNPCDYIFVQSVHS------------VDQLLDIMP 124
TE F R+ Q+ + + + NP + F+Q++H VD +D+
Sbjct: 183 DTENTFRPERITQMVNGLSEKYGMELNPEE--FLQNIHVARAYNSNHQILLVDSAVDLAN 240
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLKAMAV 182
+++ K P+RL+++DS+ A FR+++ T+ D +++ L + G+L+ +
Sbjct: 241 ELKEMGK-------PVRLLIVDSLMAHFRAEYVGRGTLADRQQK--LNKHMHGLLRFGDL 291
Query: 183 GFGLAVLVTNQVV 195
F V+VTNQV+
Sbjct: 292 -FNACVVVTNQVM 303
>gi|442535546|gb|AGC52846.1| Rad51, partial [Macrobiotus cf. harmsworthi EABP-2013]
Length = 375
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 92/185 (49%), Gaps = 10/185 (5%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +DR L GGI SITE+ E +GKTQ C + ++ QLP GG LY+
Sbjct: 134 QITTGSKELDRLLNGGIETGSITEMFGEFRTGKTQICHTMAVTCQLPVDLGGGEGKCLYI 193
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + N + D + ++ D + ++ + + + S +
Sbjct: 194 DTEGTFRPERLLAVAERY-GMNGSDVMDNVAYARAYNTDHQMALLVQAAAMMVESRYA-- 250
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV---V 195
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQV V
Sbjct: 251 ---LLIVDSATALYRTDYTGR-GELCARQMHLARFLRMLTRLADEFGVAVVITNQVVATV 306
Query: 196 DLMEP 200
D M P
Sbjct: 307 DAMMP 311
>gi|426238577|ref|XP_004013227.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Ovis aries]
Length = 371
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 112/263 (42%), Gaps = 45/263 (17%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G T LL+ T C +D LGGGIP TE+ G GKTQ C+QL +
Sbjct: 73 GRKCTALELLEQEHTQNFIITFCSALDNILGGGIPLTKTTEICGAPGVGKTQLCMQLAVD 132
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRL---------H-QLSHTFRPSNDH--------- 102
Q+P GG+ ++++ TE F + R+ H QL + +H
Sbjct: 133 VQIPECFGGVEGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAGTQMGEEHPKALQDFTL 192
Query: 103 -NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
N +I+ +LL + + F+ S +RL+++D IA FR D +D
Sbjct: 193 ENILSHIYYFRCRDYTELLAQVYLLSDFLSEHSK----VRLVIVDGIAFPFRHD----LD 244
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
DL R+ L ++ + ++A LAV++TNQ+ + N+ +
Sbjct: 245 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKFDRNQAL----------------- 287
Query: 222 ICPALGIAWANCVNSRLFLSRNE 244
+ PALG +W + R+ ++
Sbjct: 288 LVPALGESWGHAATIRIIFHWDQ 310
>gi|84784026|gb|ABC61978.1| DMC1-like protein [Trichomonas vaginalis]
Length = 338
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 89/185 (48%), Gaps = 7/185 (3%)
Query: 11 LDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGG 70
L N + T G +D+ LGGG+ SITE+ E +GKTQ C L ++AQLP S GG
Sbjct: 94 LKNRSKVIRITSGSTELDKLLGGGVESMSITEVFGEFRTGKTQLCHTLCVTAQLPLSQGG 153
Query: 71 LSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFI 130
++ TE F R+ ++ F D + ++ ++ Q+ I
Sbjct: 154 GQGKVCFIDTEGTFRPERIPVIAQRFGVDGDEALENILYARAFTHEQQMQLIQAAAAQMA 213
Query: 131 KNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLV 190
++ RL++IDSI ALFR DF +L +R ++ L +A F +A+ +
Sbjct: 214 EDQ------YRLLIIDSITALFRVDFSG-RGELAERQQTLGQMMAALTKLASEFNIAIFI 266
Query: 191 TNQVV 195
TNQV+
Sbjct: 267 TNQVM 271
>gi|54696276|gb|AAV38510.1| RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae) [synthetic
construct]
Length = 340
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDQGGGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARAFNTDHQTQLLYQASAMMVESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 218 ---LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 274 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 304
>gi|444323171|ref|XP_004182226.1| hypothetical protein TBLA_0I00440 [Tetrapisispora blattae CBS 6284]
gi|387515273|emb|CCH62707.1| hypothetical protein TBLA_0I00440 [Tetrapisispora blattae CBS 6284]
Length = 478
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 88/177 (49%), Gaps = 11/177 (6%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITEL E +GK+Q C L ++ Q+P GG LY+ T
Sbjct: 239 TTGSKNLDTLLGGGIETGSITELFGEFRTGKSQLCHTLAVTCQIPLDSGGGEGKCLYIDT 298
Query: 81 EFPFPMRRLHQLSHTF--RPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F RL ++ F P + N Y + +LLD ++ S SR
Sbjct: 299 EGTFRPVRLVSIAQRFGLDPDDALNNVAYARAYNADHQLRLLDAAAQM------MSESRF 352
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS+ AL+R+DF +L R + L+ +A FG+AV++TNQVV
Sbjct: 353 A--LVIVDSVMALYRTDFAG-RGELSARQMHLARFMRALQRLADQFGVAVVITNQVV 406
>gi|193603671|ref|XP_001948893.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Acyrthosiphon
pisum]
Length = 340
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +DR LGGGI SITE+ E +GKTQ C L ++ QLP G LY+
Sbjct: 102 QLTTGSKELDRLLGGGIETGSITEIFGEFRTGKTQLCHTLAVTCQLPIGQNGGEGKCLYI 161
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ ++ + D I ++ D ++ + + + S +
Sbjct: 162 DTEGTFRPERLLSVAERYQLVGS-DVLDNIACARAYNTDHQTQLLLQAGAMMAESRYA-- 218
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 219 ---LLIVDSAMALYRTDYSGR-GELSARQNHLARFLRMLLRLADEFGVAVVITNQVVAQV 274
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 275 D-------------GASMFAADPKKPVGGNIMAHASTTRLYLRK 305
>gi|119495453|ref|XP_001264511.1| DNA repair protein (Rad57), putative [Neosartorya fischeri NRRL
181]
gi|119412673|gb|EAW22614.1| DNA repair protein (Rad57), putative [Neosartorya fischeri NRRL
181]
Length = 777
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 101/187 (54%), Gaps = 5/187 (2%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P +D L GG+P +TE+ ESGSGKTQF L L L+ QLP GL ++Y+ TE P
Sbjct: 317 PALDELLNGGLPTGYLTEVTGESGSGKTQFLLSLLLAVQLPEPR-GLGKGAIYISTEAPL 375
Query: 85 PMRRLHQLSHTFRPSNDHNPCDYI-FVQSVHSVDQL-LDIMPKIESFIKNSSNSRLPIRL 142
RL QL + P P D ++++ S++ + L+ I ++ + +R + L
Sbjct: 376 ATSRLSQLLE-YHPYLSTLPKDRAPTLENILSINAMDLESQDHILNYQLPVAITRYDVGL 434
Query: 143 IVIDSIAALFRSDF-DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPN 201
+VIDSI + +R++ + + L RS ++ ML+ +AV +A++V NQV D +P
Sbjct: 435 VVIDSITSNYRAEHTSHNVLGLSTRSRELARLGQMLRNLAVAKKIAIVVANQVSDRFDPL 494
Query: 202 EGVNGLR 208
E LR
Sbjct: 495 ESNAALR 501
>gi|449272326|gb|EMC82304.1| DNA repair protein RAD51 like protein 1, partial [Columba livia]
Length = 338
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITEL E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 100 QITTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYI 159
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 160 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMAESRYA-- 216
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 217 ---LLIVDSATALYRTDYSGR-GELAARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 272
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 273 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 303
>gi|197092361|gb|ACH42253.1| RAD51A recombination protein [Triticum aestivum]
Length = 316
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 109/226 (48%), Gaps = 20/226 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITEL E SGKTQ C L ++ QLP GG +LY+
Sbjct: 105 QVTTGSRELDKILEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYI 164
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F + + + ++ D ++ + S + + +
Sbjct: 165 DAEGTFRPQRLLQIADRFGLYG-ADVLENVAYARAYNTDHQSRLLLEAASMMVETRFA-- 221
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+VIDS AL+R+DF +L R K L+ +A FG+AV+++NQVV
Sbjct: 222 ---LMVIDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVISNQVV--- 274
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
V+G G ++ +G I P G A+ +RL+L + +
Sbjct: 275 ---AQVDG------GAMF-AGPQIKPIGGNIMAHASTTRLYLRKGK 310
>gi|224050703|ref|XP_002196004.1| PREDICTED: DNA repair protein RAD51 homolog 1 [Taeniopygia guttata]
Length = 339
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITEL E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMAESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 218 ---LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 274 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 304
>gi|112984536|ref|NP_001037484.1| Rad51 homolog [Bombyx mori]
gi|2058709|gb|AAB53330.1| Rad51 homolog [Bombyx mori]
Length = 338
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 122/279 (43%), Gaps = 45/279 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +DR LGGGI SITE+ E +GKTQ C L ++ QLP G +Y+
Sbjct: 100 QLTTGSKELDRLLGGGIETGSITEIFGEFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYI 159
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + D + ++ D ++ + + + S S
Sbjct: 160 DTEGTFRPERLLAVAQRY-GMEGAAVLDNVAYARAYNTDHQTQLLVQACAMMAESRYS-- 216
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
LI++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV
Sbjct: 217 ---LIIVDSATALYRTDYSG-RGELNSRQLHLGRFMRMLLRLADEFGVAVIITNQVV--- 269
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+V ++G + + P G A+ +RL+L +
Sbjct: 270 --------AQVDSVGVFNADTKK--PIGGHIIAHASTTRLYLRK---------------- 303
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
G G ++ VC+ + +P L +T F I+ EG+
Sbjct: 304 -GRG-DNRVCK-------IYDSPCLPETEAMFAISAEGI 333
>gi|358378198|gb|EHK15880.1| hypothetical protein TRIVIDRAFT_227821 [Trichoderma virens Gv29-8]
Length = 467
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 142/355 (40%), Gaps = 84/355 (23%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGG+P ITE ESG GKTQF L L L+ QLP+ GL +LY+ TE
Sbjct: 109 LDAALGGGVPVGHITEFTGESGVGKTQFLLSLCLAVQLPAPR-GLGKQALYISTESGLAT 167
Query: 87 RRLHQL--SHTF--RPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRL 142
RRL Q+ +T S P + S + D L+ I + SR I L
Sbjct: 168 RRLAQMLEGNTILQEASEAGTPASLDGIHSAVTPD--LESQDHILEYQVPVLLSRHDIGL 225
Query: 143 IVIDSIAALFRSDFDNT---MDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
++IDS+AA +R++F+ ++ RS ++ +L+ +A +A++V NQV D
Sbjct: 226 MIIDSVAANYRAEFERQGSHGSNMATRSADLIRLGALLRDLARRHSIAIIVANQVADRFA 285
Query: 200 PNEGVN-----GLRVG--------------------NLGCLYSSGRPI-----------C 223
+ + +R G NL SS P+
Sbjct: 286 SSSTPSIPRSLAMRSGPSHLESPLASRSMAPPSTIPNLSSTPSSSMPVSFSFPDEEQPAS 345
Query: 224 PAL---------------------------GIAWANCVNSRLFLSRNEDFVVRENQMVNG 256
PAL G+ W+ ++ R+ L + V +
Sbjct: 346 PALALDHQQRWFTGWGDDPRSSSSLKTPSLGLVWSTQISCRVALYKRP--VYGRPTRIAA 403
Query: 257 GVGGSGSEDF---VCRRTRRSLHVVFAPHLA------DTSCEFEITREGVFGVER 302
+ D + +R + VVFAPH+A + + E+E+T G+ V++
Sbjct: 404 PISADDDADVGSPTLKTWKRWMKVVFAPHVAASGQGIENATEYEVTMTGLRSVKK 458
>gi|194746120|ref|XP_001955532.1| GF16205 [Drosophila ananassae]
gi|190628569|gb|EDV44093.1| GF16205 [Drosophila ananassae]
Length = 334
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 19/226 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ LGGGI SITE+ E GKTQ C L ++ QLP S G LY+
Sbjct: 94 QLTTGSKELDKLLGGGIETGSITEIFGEFRCGKTQICHTLAVTCQLPISQKGGEGKCLYI 153
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ ++ N+ D + ++ DQ ++ + S +
Sbjct: 154 DTENTFRPERLSAIAQRYKL-NEAEVLDNVACSRAYNSDQQTKLIQMAAGMLFESRYA-- 210
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
++++DS AL+RSD+ + +++ L + ML+ +A FG+AV++TNQV +
Sbjct: 211 ---VVIVDSAMALYRSDYIGRGELAARQNHLGLFLR-MLQRLADEFGVAVVITNQVTASV 266
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
+ G+ +G P G A+ +RL+L + +
Sbjct: 267 DAGPGM------------FAGDSKKPIGGHIMAHASTTRLYLRKGK 300
>gi|397827|dbj|BAA02962.1| HsRad51 [Homo sapiens]
Length = 339
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARAFNTDHQTQLLYQASAMMVESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 218 ---LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 274 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 304
>gi|60829742|gb|AAX36891.1| RAD51-like [synthetic construct]
gi|61369103|gb|AAX43285.1| RAD51-like [synthetic construct]
Length = 340
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARAFNTDHQTQLLYQASAMMVESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 218 ---LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 274 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 304
>gi|157965115|gb|ABW06618.1| DNA repair protein RAD51 [Buddenbrockia plumatellae]
Length = 254
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D+ L GGI SITEL E +GK+Q C QL ++ QLP GG +LY+
Sbjct: 27 QISTGSKELDKLLQGGIETGSITELFGEFRTGKSQLCHQLCITCQLPVDCGGAEGKALYI 86
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL + + N D + ++ D ++ + + + S +
Sbjct: 87 DTEGTFRPERLLAAAQRY-GLNGQQALDNVACARAYNTDHQTQLLCQAAAMMAESRYA-- 143
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS AL+R+D+ +L R K +L +A FG+AV++TNQVV
Sbjct: 144 ---LLVVDSATALYRTDYGGR-SELAPRQMHLAKFLRLLLRIADEFGVAVVITNQVV 196
>gi|19924133|ref|NP_002866.2| DNA repair protein RAD51 homolog 1 isoform 1 [Homo sapiens]
gi|114656377|ref|XP_001144621.1| PREDICTED: DNA repair protein RAD51 homolog 1 isoform 3 [Pan
troglodytes]
gi|297696332|ref|XP_002825350.1| PREDICTED: DNA repair protein RAD51 homolog 1 isoform 1 [Pongo
abelii]
gi|332235183|ref|XP_003266786.1| PREDICTED: DNA repair protein RAD51 homolog 1 isoform 1 [Nomascus
leucogenys]
gi|397512609|ref|XP_003826633.1| PREDICTED: DNA repair protein RAD51 homolog 1 isoform 1 [Pan
paniscus]
gi|397512613|ref|XP_003826635.1| PREDICTED: DNA repair protein RAD51 homolog 1 isoform 3 [Pan
paniscus]
gi|402873987|ref|XP_003900829.1| PREDICTED: DNA repair protein RAD51 homolog 1 isoform 1 [Papio
anubis]
gi|548663|sp|Q06609.1|RAD51_HUMAN RecName: Full=DNA repair protein RAD51 homolog 1; Short=HsRAD51;
Short=hRAD51; AltName: Full=RAD51 homolog A
gi|285977|dbj|BAA03189.1| RAD51 [Homo sapiens]
gi|5733658|gb|AAD49705.1| Rad51 [Homo sapiens]
gi|7767554|gb|AAF69145.1| RAD51 [Homo sapiens]
gi|27368250|gb|AAN87149.1| RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae) [Homo
sapiens]
gi|49168602|emb|CAG38796.1| RAD51 [Homo sapiens]
gi|60817856|gb|AAX36441.1| RAD51-like [synthetic construct]
gi|61358913|gb|AAX41640.1| RAD51-like [synthetic construct]
gi|119612840|gb|EAW92434.1| RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae), isoform
CRA_d [Homo sapiens]
gi|189069251|dbj|BAG36283.1| unnamed protein product [Homo sapiens]
gi|261860564|dbj|BAI46804.1| RAD51 homolog [synthetic construct]
gi|355692613|gb|EHH27216.1| hypothetical protein EGK_17369 [Macaca mulatta]
gi|383414637|gb|AFH30532.1| DNA repair protein RAD51 homolog 1 isoform 1 [Macaca mulatta]
gi|387540962|gb|AFJ71108.1| DNA repair protein RAD51 homolog 1 isoform 1 [Macaca mulatta]
gi|410225338|gb|JAA09888.1| RAD51 homolog [Pan troglodytes]
gi|410262156|gb|JAA19044.1| RAD51 homolog [Pan troglodytes]
gi|410290586|gb|JAA23893.1| RAD51 homolog [Pan troglodytes]
gi|410329095|gb|JAA33494.1| RAD51 homolog [Pan troglodytes]
Length = 339
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARAFNTDHQTQLLYQASAMMVESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 218 ---LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 274 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 304
>gi|443897777|dbj|GAC75116.1| DNA repair protein RAD51/RHP55 [Pseudozyma antarctica T-34]
Length = 280
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGG+ SITEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 30 TTGSKNLDAILGGGMETGSITELYGEFRTGKSQLCHTLAVTCQLPVDMGGGEGKCLYIDT 89
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N D + ++ D L ++ + + + S S
Sbjct: 90 EGTFRPTRLLAVAERY-GLNGEEVLDNVAYARAYNADHQLQLLMQASAMMAESRFS---- 144
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS+ +L+R+DF +L R K L +A FG+AV++TNQVV
Sbjct: 145 -LLIVDSLTSLYRTDFSGR-GELSARQMHLAKFLRGLMRLADEFGVAVVITNQVV 197
>gi|410933223|ref|XP_003979991.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Takifugu
rubripes]
Length = 346
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 42/231 (18%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGG P +TE+ G GKTQ CLQL + AQ+P GG+ +Y+ TE F +
Sbjct: 90 LDAALGGGAPVGRVTEVCGVPGVGKTQLCLQLAVDAQVPRCFGGVGGQVVYIDTEGSFLI 149
Query: 87 RRLHQLS-----HTFRPSNDHNP------------CDYIFVQSVHSVDQLLDIMPKIESF 129
+R+ L+ H D +FV H +LL + + F
Sbjct: 150 QRVADLAAAAVNHCSLLVEDQEQRVAMETFTVESILSNMFVVRCHDYIELLAELHLMPGF 209
Query: 130 IKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVL 189
+ + +RL+VIDS+A+ FR F D+L +R+ L + L +MA +AV+
Sbjct: 210 LSDHPR----VRLLVIDSVASPFRPLF----DELLQRTRLLSGFAQQLLSMATSHDIAVV 261
Query: 190 VTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
+TNQ+ ++ + + PALG +W + RL L
Sbjct: 262 ITNQMTTRVQGAQS-----------------QLVPALGDSWGHAATIRLLL 295
>gi|403289415|ref|XP_003935854.1| PREDICTED: DNA repair protein RAD51 homolog 1 [Saimiri boliviensis
boliviensis]
Length = 324
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 86 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 145
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 146 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARAFNTDHQTQLLYQASAMMVESRYA-- 202
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 203 ---LLIVDSATALYRTDYSG-RGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 258
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 259 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 289
>gi|195037391|ref|XP_001990144.1| GH18396 [Drosophila grimshawi]
gi|193894340|gb|EDV93206.1| GH18396 [Drosophila grimshawi]
Length = 352
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 11/177 (6%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ LGGGI SITE+ E GKTQ C L ++ QLP S G +LY+ T
Sbjct: 113 TTGSKELDKLLGGGIETGSITEIFGEFRCGKTQICHTLAVTCQLPISQNGGEGKALYIDT 172
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + + D + H+ DQ ++ + S +
Sbjct: 173 EGTFRPERLSAIAQRY-SMEEADVLDNVACARAHNTDQQTKLVQMAAGMMFESRYA---- 227
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSF--LFFKISGMLKAMAVGFGLAVLVTNQVV 195
LI++DS AL+RS++ + +++ LF + ML+ +A FG+AV++TNQV
Sbjct: 228 -LIIVDSAMALYRSEYIGRGELAARQNHLGLFLR---MLQRLADEFGVAVVITNQVT 280
>gi|440492453|gb|ELQ75018.1| DNA repair protein RAD51/RHP55 [Trachipleistophora hominis]
Length = 343
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 107/222 (48%), Gaps = 19/222 (8%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GGI SITE+ E +GKTQ C L ++ QL +GG S +LY+ T
Sbjct: 106 TTGSQELDKLLKGGIETGSITEIFGEFRTGKTQLCHTLAVTCQLDRENGGGSGKALYIDT 165
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R ++ F +D + + ++ +S D ++ + + + S+ S
Sbjct: 166 EGTFRPERCIAVAQRFGLDSDQVLENISYARAYNS-DHQSQLLVQAAAMLSESNYS---- 220
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
LI++DS AL+R+DF +L R + ML +A F +AV++TNQVV
Sbjct: 221 -LIIVDSAMALYRTDFSG-RGELGARQIHLARFLRMLLRLADEFSVAVVITNQVV----- 273
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
V ++++ P PA G A+ +RL+L +
Sbjct: 274 ------ASVDGAAAMFNAD-PKKPAGGHIIAHASTTRLYLRK 308
>gi|197092363|gb|ACH42254.1| RAD51C protein [Triticum aestivum]
Length = 270
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 116/250 (46%), Gaps = 44/250 (17%)
Query: 10 LLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHG 69
+L + + T G ++ LGGGI C +TE+ G GKTQ +QL ++ Q+P +G
Sbjct: 1 MLSEEQSQKHITTGSGDLNGILGGGIHCKEVTEIGGVPGIGKTQLGIQLAINVQIPVDYG 60
Query: 70 GLSASSLYLHTEFPFPMRRLHQLSH-TFRPSNDHNPCDY------------------IFV 110
GL ++Y+ TE F + R++Q++ ++ PC + I+
Sbjct: 61 GLGGKAIYIDTEGSFMVERVYQIAEGCISDIMEYFPCHHDKSSSGQENLQPESFLAGIYY 120
Query: 111 QSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLF 170
+ S + + ++ +E F+ + +R+++IDS+ FR DF DDL R+ +
Sbjct: 121 FRICSYTEQIAVINYLEKFLGEHKD----VRIVIIDSVTFHFRQDF----DDLALRTRVL 172
Query: 171 FKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAW 230
+S L ++ + LAV++ NQV + EG L + ALG +W
Sbjct: 173 SGLSLKLMKLSKSYNLAVVLLNQVT--TKFTEGSFQLTL---------------ALGDSW 215
Query: 231 ANCVNSRLFL 240
++ +RL L
Sbjct: 216 SHSCINRLIL 225
>gi|384487459|gb|EIE79639.1| DNA repair protein RAD51 [Rhizopus delemar RA 99-880]
Length = 344
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 121/278 (43%), Gaps = 47/278 (16%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ LGGGI SITEL E +GK+Q C L +S QL +GG LY+ T
Sbjct: 108 TTGSKELDKILGGGIETGSITELFGEFRTGKSQLCHTLAVSCQLSMENGGAEGKCLYIDT 167
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
E F R+ LS R D C + I ++ D ++ + S + + S
Sbjct: 168 EGTFRPSRI--LSIATRFGLDTEICLNNIAYARAYNADHQAALLFQASSMMAETRFS--- 222
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
L+++DS+ AL+R+DF +L R K L+ +A FG+A+++TNQ++ ++
Sbjct: 223 --LLIVDSVIALYRTDFAG-RGELSLRQMHLGKFLRSLQRIADEFGVAIVITNQMLSTVD 279
Query: 200 PNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVG 259
G + P P G A+ +RL+L +
Sbjct: 280 -------------GTNIFTADPKKPTGGNIMAHACTTRLYLRK----------------- 309
Query: 260 GSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
G G E +C+ V +P L +T F I EG+
Sbjct: 310 GRG-ESRICK-------VYDSPSLPETEATFSILEEGI 339
>gi|70995734|ref|XP_752622.1| DNA repair protein (Rad57) [Aspergillus fumigatus Af293]
gi|66850257|gb|EAL90584.1| DNA repair protein (Rad57), putative [Aspergillus fumigatus Af293]
Length = 647
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 101/190 (53%), Gaps = 11/190 (5%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P +D L GG+P +TE+ ESGSGKTQF L L L+ QLP GL ++Y+ TE P
Sbjct: 187 PALDELLNGGLPTGYLTEVTGESGSGKTQFLLSLLLAVQLPEPR-GLGKGAIYISTEAPL 245
Query: 85 PMRRLHQL--SHTF---RPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
RL QL H + P + D I S++++D L+ I ++ + +R
Sbjct: 246 ATSRLSQLLEYHPYLSDLPKDRAPTLDNIL--SINAMD--LESQDHILNYQLPVAITRYD 301
Query: 140 IRLIVIDSIAALFRSDF-DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
+ L+VIDSI + +R++ + + L RS ++ ML+ +AV +A++V NQV D
Sbjct: 302 VGLVVIDSITSNYRAEHTSHNVLGLSTRSGELARLGQMLRNLAVAKNIAIVVANQVSDRF 361
Query: 199 EPNEGVNGLR 208
+P E LR
Sbjct: 362 DPLEDNAALR 371
>gi|159131375|gb|EDP56488.1| DNA repair protein (Rad57), putative [Aspergillus fumigatus A1163]
Length = 647
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 101/190 (53%), Gaps = 11/190 (5%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P +D L GG+P +TE+ ESGSGKTQF L L L+ QLP GL ++Y+ TE P
Sbjct: 187 PALDELLNGGLPTGYLTEVTGESGSGKTQFLLSLLLAVQLPEPR-GLGKGAIYISTEAPL 245
Query: 85 PMRRLHQL--SHTF---RPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
RL QL H + P + D I S++++D L+ I ++ + +R
Sbjct: 246 ATSRLSQLLEYHPYLSDLPKDRAPTLDNIL--SINAMD--LESQDHILNYQLPVAITRYD 301
Query: 140 IRLIVIDSIAALFRSDF-DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
+ L+VIDSI + +R++ + + L RS ++ ML+ +AV +A++V NQV D
Sbjct: 302 VGLVVIDSITSNYRAEHTSHNVLGLSTRSGELARLGQMLRNLAVAKNIAIVVANQVSDRF 361
Query: 199 EPNEGVNGLR 208
+P E LR
Sbjct: 362 DPLEDNAALR 371
>gi|167387582|ref|XP_001738222.1| DNA repair protein rad51 [Entamoeba dispar SAW760]
gi|165898654|gb|EDR25461.1| DNA repair protein rad51, putative [Entamoeba dispar SAW760]
Length = 365
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 17 TEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSL 76
T + T G +D+ L GG SITEL E +GKTQ C QL ++ QL +GG ++
Sbjct: 123 TIRITTGSRELDKLLCGGFETGSITELFGEFRTGKTQLCHQLCVTCQLGIENGGTEGRAI 182
Query: 77 YLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNS 136
Y+ TE F RL Q++ + N + + V H+ + + ++ +
Sbjct: 183 YIDTEGTFRPERLTQIAEKY-GLNSEEALNNVAVARAHNTEHQMQLLQMASGLMAKERYG 241
Query: 137 RLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
L++IDS AL+R+D+ +L R K L+ +A F +AV++TNQVV
Sbjct: 242 -----LLIIDSATALYRTDYSG-RGELASRQMHLAKFLRALQRIADEFSVAVVLTNQVVA 295
Query: 197 LMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
++ + G G P G A+ +RL+L + +
Sbjct: 296 QVDGQASMFG------------GDTKKPVGGNIIAHASTTRLYLRKGK 331
>gi|66822135|ref|XP_644422.1| hypothetical protein DDB_G0273611 [Dictyostelium discoideum AX4]
gi|66822947|ref|XP_644828.1| hypothetical protein DDB_G0273139 [Dictyostelium discoideum AX4]
gi|60472545|gb|EAL70496.1| hypothetical protein DDB_G0273611 [Dictyostelium discoideum AX4]
gi|60472838|gb|EAL70787.1| hypothetical protein DDB_G0273139 [Dictyostelium discoideum AX4]
Length = 351
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 93/179 (51%), Gaps = 11/179 (6%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G D L GGI SITE+ E +GKTQ C L ++ QL S GG +LY+
Sbjct: 111 QITTGSKEFDSLLDGGIESGSITEIFGEFRTGKTQICHTLCVTCQLGYSQGGGEGRALYI 170
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + + +H D + ++ D L+++ + + + S SR
Sbjct: 171 DTEGTFRPERLLAIAERYNLNGEH-VLDNVSYARAYNSDHQLELLVQASAMM---SESRY 226
Query: 139 PIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+D+ + D +K F + L+ +A FG+AV++TNQVV
Sbjct: 227 A--LLIVDSATALYRTDYAGRGELADRQKHLARFLRT---LQRLADEFGVAVVITNQVV 280
>gi|321265185|ref|XP_003197309.1| meiotic recombination-related protein [Cryptococcus gattii WM276]
gi|317463788|gb|ADV25522.1| Meiotic recombination-related protein, putative [Cryptococcus
gattii WM276]
Length = 308
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 94/196 (47%), Gaps = 14/196 (7%)
Query: 3 APMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSA 62
A +T + D T G +D LGGGI SITE+ E +GKTQ C L +S
Sbjct: 53 AFLTGTEIADRRANVVYITTGSKSVDAMLGGGIATQSITEVFGEYRTGKTQLCHTLCVST 112
Query: 63 QLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSN----DHNPCDYIFVQSVHSVDQ 118
QLP GG S Y+ TE F R+ ++ F + D+ C + S H D
Sbjct: 113 QLPEDQGGGSGKVAYIDTEGTFRPDRVRAVADRFGVDSNMALDNVLCARAW-SSEHQCDL 171
Query: 119 LLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLK 178
L+D+ + F++ + +L+++DSI LFR D+ +L +R + L+
Sbjct: 172 LVDLAIR---FVEERA-----YKLLIVDSIMNLFRQDYSG-RGELSERQQKLNQFLARLQ 222
Query: 179 AMAVGFGLAVLVTNQV 194
+A F +AV++TNQV
Sbjct: 223 KLAEEFNIAVVLTNQV 238
>gi|67477127|ref|XP_654076.1| DNA repair protein RAD51 [Entamoeba histolytica HM-1:IMSS]
gi|56471096|gb|EAL48690.1| DNA repair protein RAD51, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449710730|gb|EMD49753.1| DNA repair protein RAD51, putative [Entamoeba histolytica KU27]
Length = 366
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 19/228 (8%)
Query: 17 TEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSL 76
T + T G +D+ L GG SITEL E +GKTQ C QL ++ QL +GG ++
Sbjct: 124 TIRITTGSRELDKLLCGGFETGSITELFGEFRTGKTQLCHQLCVTCQLGIENGGTEGRAI 183
Query: 77 YLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNS 136
Y+ TE F RL Q++ + N + + V H+ + + ++ + +
Sbjct: 184 YIDTEGTFRPERLTQIAEKY-GLNSEEALNNVAVARAHNTEHQMQLLQMASGLM-----A 237
Query: 137 RLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
+ L++IDS AL+R+D+ +L R K L+ +A F +AV++TNQVV
Sbjct: 238 KERYGLLIIDSATALYRTDYSG-RGELASRQMHLAKFLRALQRIADEFSVAVVLTNQVVA 296
Query: 197 LMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
++ + G G P G A+ +RL+L + +
Sbjct: 297 QVDGQASMFG------------GDTKKPVGGNIIAHASTTRLYLRKGK 332
>gi|407040527|gb|EKE40177.1| DNA repair protein RAD51 protein [Entamoeba nuttalli P19]
Length = 365
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 19/228 (8%)
Query: 17 TEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSL 76
T + T G +D+ L GG SITEL E +GKTQ C QL ++ QL +GG ++
Sbjct: 123 TIRITTGSRELDKLLCGGFETGSITELFGEFRTGKTQLCHQLCVTCQLGIENGGTEGRAI 182
Query: 77 YLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNS 136
Y+ TE F RL Q++ + N + + V H+ + + ++ + +
Sbjct: 183 YIDTEGTFRPERLTQIAEKY-GLNSEEALNNVAVARAHNTEHQMQLLQMASGLM-----A 236
Query: 137 RLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
+ L++IDS AL+R+D+ +L R K L+ +A F +AV++TNQVV
Sbjct: 237 KERYGLLIIDSATALYRTDYSG-RGELASRQMHLAKFLRALQRIADEFSVAVVLTNQVVA 295
Query: 197 LMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
++ + G G P G A+ +RL+L + +
Sbjct: 296 QVDGQASMFG------------GDTKKPVGGNIIAHASTTRLYLRKGK 331
>gi|62858453|ref|NP_001016393.1| RAD51 homolog [Xenopus (Silurana) tropicalis]
gi|134254224|gb|AAI35426.1| hypothetical protein LOC549147 [Xenopus (Silurana) tropicalis]
Length = 336
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 98 QISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYI 157
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 158 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARAFNTDHQTQLLYQASAMMAESRYA-- 214
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 215 ---LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 270
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 271 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 301
>gi|336272053|ref|XP_003350784.1| RAD57 protein [Sordaria macrospora k-hell]
gi|380094947|emb|CCC07449.1| putative RAD57 protein [Sordaria macrospora k-hell]
Length = 481
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 99/205 (48%), Gaps = 43/205 (20%)
Query: 25 PIIDRCLGGG-IPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFP 83
P +DR LGGG IP +TE+ ESG+GKTQF L L L+ QLP H GL +LY+ TE P
Sbjct: 115 PDLDRALGGGGIPAGYVTEITGESGAGKTQFLLTLLLAVQLPPPH-GLGRPALYISTEAP 173
Query: 84 FPMRRLHQL---------------SHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIES 128
RRL Q+ + + RPS D+ + S D +L +E
Sbjct: 174 LSTRRLAQMLTTNPFFKGLDETDGASSVRPSLDN--IISTVTPDLESQDHILTYQVPVEI 231
Query: 129 FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD-----------------DLKKRSFLFF 171
+N I L+V+DS+AA +R++F+ + ++ R+
Sbjct: 232 ERRN-------IGLLVLDSVAANYRAEFERSSKKDATTSSSTPGPGARSSNMGARTAELV 284
Query: 172 KISGMLKAMAVGFGLAVLVTNQVVD 196
++ L+ +A + LAV+V+NQV D
Sbjct: 285 RLGMQLRDLAQKYNLAVVVSNQVAD 309
>gi|125772735|ref|XP_001357643.1| GA20711 [Drosophila pseudoobscura pseudoobscura]
gi|195159258|ref|XP_002020499.1| GL13479 [Drosophila persimilis]
gi|54637375|gb|EAL26777.1| GA20711 [Drosophila pseudoobscura pseudoobscura]
gi|194117268|gb|EDW39311.1| GL13479 [Drosophila persimilis]
gi|225581186|gb|ACN94754.1| GA20711 [Drosophila miranda]
Length = 335
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 19/224 (8%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ LGGGI SITE+ E GKTQ C L ++ QLP S G LY+ T
Sbjct: 96 TTGSKELDKLLGGGIETGSITEIFGEFRCGKTQICHTLAVTCQLPISQKGGEGKCLYIDT 155
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F+ N+ D + ++ DQ ++ + + +
Sbjct: 156 ESTFRTERLSAIAQRFKL-NESEVLDNVSCARAYNSDQQTKLLQMAAGMLFETRYA---- 210
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
+++DS+ AL+RSD+ + +++ L + L+ +A FG+AV++TNQV ++
Sbjct: 211 -AVIVDSVMALYRSDYIGRGELAARQNHLGLCMR-QLQRLADEFGVAVVITNQVTAQLD- 267
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
G G + + P G A+ +RL+L + +
Sbjct: 268 ---------GGGGMFVADAKK--PVGGHILAHASTTRLYLRKGK 300
>gi|195395050|ref|XP_002056149.1| GJ10382 [Drosophila virilis]
gi|194142858|gb|EDW59261.1| GJ10382 [Drosophila virilis]
Length = 351
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 11/177 (6%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ LGGGI SITE+ E GKTQ C L ++ QLP S G +LY+ T
Sbjct: 112 TTGSKELDKLLGGGIETGSITEIFGEFRCGKTQICHTLAVTCQLPISQNGGEGKALYIDT 171
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + + D + H+ DQ ++ + S +
Sbjct: 172 EGTFRPERLSAIAQRYN-MEEADVLDNVACARAHNTDQQTKLVQMAAGMMFESRYA---- 226
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSF--LFFKISGMLKAMAVGFGLAVLVTNQVV 195
LI++DS AL+RS++ + +++ LF + ML+ +A FG+AV++TNQV
Sbjct: 227 -LIIVDSAMALYRSEYIGRGELAARQNHLGLFLR---MLQRLADEFGVAVVITNQVT 279
>gi|149051556|gb|EDM03729.1| similar to RAD51-like 1 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 258
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 93/166 (56%), Gaps = 6/166 (3%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+PC S+TE+ G GKTQFC+ +++ A LP+ GGL + LY+ TE F
Sbjct: 90 LDEALHGGVPCGSLTEVTGPPGCGKTQFCIMMSVLATLPTRLGGLEGAVLYIDTESAFTA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L ++ ++ES + + ++L+
Sbjct: 150 ERLVEIAESRFPQYFNTEEKLLLTSSRVHLCQELTCEGLLQRLESLEEEIISK--GVKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAV 188
++DSIA++ R +FD + ++K+R+ K + +LK ++ F + V
Sbjct: 208 IVDSIASVVRKEFDPQLQGNIKERNKFLGKGASLLKYLSGEFSVPV 253
>gi|354544865|emb|CCE41590.1| hypothetical protein CPAR2_801420 [Candida parapsilosis]
Length = 377
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 124/278 (44%), Gaps = 46/278 (16%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGG+ SITE+ E +GK+Q C LT++ QLP GG LY+ T
Sbjct: 136 TTGSKQLDTLLGGGVETGSITEVFGEFRTGKSQLCHTLTVTCQLPIDMGGGEGKCLYIDT 195
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
E F RL ++ + S N C D + ++ + L+++ + S S
Sbjct: 196 EGTFRPNRLVSIAERYGLSP--NDCLDNVAYARAYNAEHQLNLLHLAAQMMAESRFS--- 250
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
L+++DSI +L+R+D+ +L R K L+ +A FG+AV++TNQVV
Sbjct: 251 --LLIVDSIMSLYRTDYAG-RGELSARQTSVAKFMRTLQRLADEFGIAVVITNQVV---- 303
Query: 200 PNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVG 259
+V + +Y+ P P G A+ +RL L +
Sbjct: 304 -------AQVDGMSGMYNPD-PKKPIGGNIIAHASTTRLSLKK----------------- 338
Query: 260 GSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
G G E +C+ + +P L ++ C F I +G+
Sbjct: 339 GRG-EQRICK-------IYDSPCLPESDCVFAIYEDGI 368
>gi|357616274|gb|EHJ70106.1| Rad51-like protein [Danaus plexippus]
Length = 338
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 122/279 (43%), Gaps = 45/279 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +DR LGGGI SITE+ E +GKTQ C L ++ QLP G +Y+
Sbjct: 100 QLTTGSKELDRLLGGGIETGSITEIFGEFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYI 159
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + D + ++ D ++ + + + S S
Sbjct: 160 DTEGTFRPERLLAVAQRY-GMESAAVLDNVAYARAYNTDHQTQLLVQACAMMAESRYS-- 216
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV
Sbjct: 217 ---LLIVDSATALYRTDYSG-RGELNSRQLHLGRFMRMLLRLADEFGVAVIITNQVV--- 269
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+V ++G + + P G A+ +RL+L +
Sbjct: 270 --------AQVDSVGVFNADTKK--PIGGHIIAHASTTRLYLRK---------------- 303
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
G G ++ VC+ + +P L +T F I+ EG+
Sbjct: 304 -GRG-DNRVCK-------IYDSPCLPETEAMFAISTEGI 333
>gi|388854421|emb|CCF52005.1| probable DNA repair protein RAD51 [Ustilago hordei]
Length = 339
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGG+ SITEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 103 TTGSKNLDAILGGGMETGSITELYGEFRTGKSQLCHTLAVTCQLPVDMGGGEGKCLYIDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N D + ++ D L ++ + + + S S
Sbjct: 163 EGTFRPVRLLAVAERY-GLNGEEVLDNVAYARAYNADHQLQLLMQASAMMAESRFS---- 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS+ +L+R+DF +L R K L +A FG+AV++TNQVV
Sbjct: 218 -LLIVDSLTSLYRTDFSGR-GELSARQMHLAKFLRGLMRLADEFGVAVVITNQVV 270
>gi|242019042|ref|XP_002429975.1| DNA repair protein rad51, putative [Pediculus humanus corporis]
gi|212515030|gb|EEB17237.1| DNA repair protein rad51, putative [Pediculus humanus corporis]
Length = 339
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ LGGGI SITE+ E +GKTQ C L ++ QLP G LY+ T
Sbjct: 103 TTGSKELDKLLGGGIETGSITEIFGEFRTGKTQLCHTLAVTCQLPIDQNGGEGKCLYIDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F+ S + D + V ++ D ++ + + S +
Sbjct: 163 EGTFRPERLIAVAERFKLSLS-DVLDNVAVARAYNTDHQTQLLLMASAMMSESRYA---- 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L++IDS AL+R+D+ +L R + M +A FG+AV++TNQVV
Sbjct: 218 -LLIIDSATALYRTDYSG-RGELSARQMHLARFLRMCLRLADEFGVAVILTNQVV 270
>gi|41581328|emb|CAE47977.1| rad57 protein, putative [Aspergillus fumigatus]
Length = 571
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 101/190 (53%), Gaps = 11/190 (5%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P +D L GG+P +TE+ ESGSGKTQF L L L+ QLP GL ++Y+ TE P
Sbjct: 111 PALDELLNGGLPTGYLTEVTGESGSGKTQFLLSLLLAVQLPEPR-GLGKGAIYISTEAPL 169
Query: 85 PMRRLHQL--SHTF---RPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
RL QL H + P + D I S++++D L+ I ++ + +R
Sbjct: 170 ATSRLSQLLEYHPYLSDLPKDRAPTLDNIL--SINAMD--LESQDHILNYQLPVAITRYD 225
Query: 140 IRLIVIDSIAALFRSDF-DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
+ L+VIDSI + +R++ + + L RS ++ ML+ +AV +A++V NQV D
Sbjct: 226 VGLVVIDSITSNYRAEHTSHNVLGLSTRSGELARLGQMLRNLAVAKNIAIVVANQVSDRF 285
Query: 199 EPNEGVNGLR 208
+P E LR
Sbjct: 286 DPLEDNAALR 295
>gi|255541250|ref|XP_002511689.1| DNA repair and recombination protein radA, putative [Ricinus
communis]
gi|223548869|gb|EEF50358.1| DNA repair and recombination protein radA, putative [Ricinus
communis]
Length = 346
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 115/256 (44%), Gaps = 44/256 (17%)
Query: 9 NLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSH 68
+L + + T C +D LGGGI C +TE+ G GKTQ +QL ++ Q+P
Sbjct: 77 EMLHEESSLTRITTSCADLDNILGGGITCKEVTEIGGLPGIGKTQLGIQLAVNVQIPPYC 136
Query: 69 GGLSASSLYLHTEFPFPMRRLHQ---------LSHTFRPSNDHNPC----------DYIF 109
GGL ++Y+ TE F + R+ Q L ++ D C + I+
Sbjct: 137 GGLGGKAVYIDTEGSFMVERVLQVAEASVEDMLEYSRFLRRDLQTCQVATQSKDILENIY 196
Query: 110 VQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFL 169
V S + + ++ +E FI + +++++IDSI FR DF DDL R+ +
Sbjct: 197 YFRVCSYTEQVALVNYLEKFISEHRD----VKVVIIDSITFHFRQDF----DDLALRTRV 248
Query: 170 FFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIA 229
++ L +A F LAV++ NQV + EG L + ALG +
Sbjct: 249 LSGMALKLMKIAKSFSLAVVLLNQVT--TKHTEGSFQLGL---------------ALGES 291
Query: 230 WANCVNSRLFLSRNED 245
W++ +R+ L N +
Sbjct: 292 WSHSCTNRIILYWNSN 307
>gi|148643393|ref|YP_001273906.1| DNA repair and recombination protein RadA [Methanobrevibacter
smithii ATCC 35061]
gi|222445636|ref|ZP_03608151.1| hypothetical protein METSMIALI_01276 [Methanobrevibacter smithii
DSM 2375]
gi|166218764|sp|A5UMW0.1|RADA_METS3 RecName: Full=DNA repair and recombination protein RadA
gi|148552410|gb|ABQ87538.1| DNA repair protein RadA, RadA [Methanobrevibacter smithii ATCC
35061]
gi|222435201|gb|EEE42366.1| DNA repair and recombination protein RadA [Methanobrevibacter
smithii DSM 2375]
Length = 311
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 127/292 (43%), Gaps = 47/292 (16%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T ++L+ +VG + +GGGI SITE+ E GSGK+Q +L ++ QLP
Sbjct: 65 TAYDVLERRRDVGHISVGSEGFNDLIGGGIETQSITEVFGEFGSGKSQISHELAVTVQLP 124
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GGL +++ TE F R+ Q+++ F D ++ +S Q+L + K
Sbjct: 125 PEKGGLDGECVFIDTENTFRPERIEQIANGFELDIDEVLQKIHVARAFNSSHQIL-MAEK 183
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
I I+ +N I+L+++DS+ A FR+++ + L R + L+ +A +
Sbjct: 184 INELIQQGNN----IKLVIVDSLMAHFRAEYVGR-ESLAVRQQKLNQHLHALQQIANTYN 238
Query: 186 LAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+AV +TNQV +P+ G P G + R++L +
Sbjct: 239 VAVFITNQV--QAKPDSFF--------------GSPTKAIGGHVLGHASTYRIWLKK--- 279
Query: 246 FVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
G+ G +R +V +PHL + C F+I EG+
Sbjct: 280 -----------GLAG-----------KRIARLVDSPHLPEGECVFKIKTEGI 309
>gi|339234621|ref|XP_003378865.1| DNA repair and recombination protein RadA [Trichinella spiralis]
gi|316978565|gb|EFV61540.1| DNA repair and recombination protein RadA [Trichinella spiralis]
Length = 364
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 103/224 (45%), Gaps = 19/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG LY+
Sbjct: 125 QITTGSKELDKLLQGGIETGSITEVFGEFRTGKTQLCHTLAVTCQLPVDMGGGEGKCLYI 184
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F+ S + D + ++ D ++ + + + S +
Sbjct: 185 DTEGTFRPERLLSVADRFQLSGP-DVLDNVAYARAYNTDHQSQLLIQASAMMSESRYA-- 241
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + L +A FG+AVL+TNQVV
Sbjct: 242 ---LLIVDSATALYRTDYSG-RGELSARQMHLGRFLRYLLRLADEFGVAVLITNQVV--- 294
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
V+G G P P G A+ +RL+L +
Sbjct: 295 ---AQVDG------GTAMFQADPKKPIGGNIMAHASTTRLYLRK 329
>gi|288869613|ref|ZP_05975231.2| DNA repair and recombination protein RadA [Methanobrevibacter
smithii DSM 2374]
gi|288860598|gb|EFC92896.1| DNA repair and recombination protein RadA [Methanobrevibacter
smithii DSM 2374]
Length = 314
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 127/292 (43%), Gaps = 47/292 (16%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T ++L+ +VG + +GGGI SITE+ E GSGK+Q +L ++ QLP
Sbjct: 68 TAYDVLERRRDVGHISVGSEGFNDLIGGGIETQSITEVFGEFGSGKSQISHELAVTVQLP 127
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GGL +++ TE F R+ Q+++ F D ++ +S Q+L + K
Sbjct: 128 PEKGGLDGECVFIDTENTFRPERIEQIANGFELDIDEVLQKIHVARAFNSSHQIL-MAEK 186
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
I I+ +N I+L+++DS+ A FR+++ + L R + L+ +A +
Sbjct: 187 INELIQQGNN----IKLVIVDSLMAHFRAEYVGR-ESLAVRQQKLNQHLHALQQIANTYN 241
Query: 186 LAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+AV +TNQV +P+ G P G + R++L +
Sbjct: 242 VAVFITNQV--QAKPDSFF--------------GSPTKAIGGHVLGHASTYRIWLKK--- 282
Query: 246 FVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
G+ G +R +V +PHL + C F+I EG+
Sbjct: 283 -----------GLAG-----------KRIARLVDSPHLPEGECVFKIKTEGI 312
>gi|431904503|gb|ELK09886.1| DNA repair protein RAD51 like protein 2 [Pteropus alecto]
Length = 295
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 94/164 (57%), Gaps = 6/164 (3%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 122 LDEALRGGVACGSLTEITGPPGCGKTQFCIMMSVLATLPTNMGGLEGAVVYIDTESAFSA 181
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQL--LDIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P ++ + S VH +L +++ +IES + + ++L+
Sbjct: 182 ERLVEIAESRFPRYFNDEEKLLLTSSKVHLYRELNCDEVLQRIESLEEEIISK--GVKLV 239
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGL 186
+IDS+A++ R +FD ++ ++++R+ + + LK +A F +
Sbjct: 240 IIDSVASVVRKEFDTQLEGNMRERNKFLAREAASLKYLAEEFSI 283
>gi|17402896|ref|NP_478123.1| DNA repair protein RAD51 homolog 3 isoform 1 [Homo sapiens]
gi|3914534|sp|O43502.1|RA51C_HUMAN RecName: Full=DNA repair protein RAD51 homolog 3; Short=R51H3;
AltName: Full=RAD51 homolog C; AltName: Full=RAD51-like
protein 2
gi|2909801|gb|AAC39604.1| Rad51C [Homo sapiens]
gi|47777661|gb|AAT38108.1| RAD51 homolog C (S. cerevisiae) [Homo sapiens]
gi|78070501|gb|AAI07754.1| RAD51 homolog C (S. cerevisiae) [Homo sapiens]
gi|119614839|gb|EAW94433.1| RAD51 homolog C (S. cerevisiae), isoform CRA_d [Homo sapiens]
gi|261860596|dbj|BAI46820.1| RAD51 homolog C [synthetic construct]
Length = 376
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 45/255 (17%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T LL+ T C +D LGGG+P TE+ G GKTQ C+QL + Q+P
Sbjct: 86 TALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIP 145
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDH---------------NPC 105
GG++ ++++ TE F + R+ L+ H + H N
Sbjct: 146 ECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTLDNIL 205
Query: 106 DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKK 165
+I+ +LL + + F+ S +RL+++D IA FR D +DDL
Sbjct: 206 SHIYYFRCRDYTELLAQVYLLPDFLSEHSK----VRLVIVDGIAFPFRHD----LDDLSL 257
Query: 166 RSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPA 225
R+ L ++ + ++A LAV++TNQ+ ++ N+ + + PA
Sbjct: 258 RTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQAL-----------------LVPA 300
Query: 226 LGIAWANCVNSRLFL 240
LG +W + RL
Sbjct: 301 LGESWGHAATIRLIF 315
>gi|332848643|ref|XP_511913.3| PREDICTED: DNA repair protein RAD51 homolog 3 [Pan troglodytes]
Length = 337
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 110/254 (43%), Gaps = 45/254 (17%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T LL+ T C +D LGGG+P TE+ G GKTQ C+QL + Q+P
Sbjct: 77 TALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIP 136
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDH---------------NPC 105
GG++ ++++ TE F + R+ L+ H + H N
Sbjct: 137 ECFGGVAGEAVFIDTEGSFMVDRVVDLATACIEHLQLIAEKHKGEEHQKALEDFTLDNIL 196
Query: 106 DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKK 165
+I+ +LL + + F+ S +RL+++D IA FR D +DDL
Sbjct: 197 SHIYYFRCRDYTELLAQVYLLPDFLSEHSK----VRLVIVDGIAFPFRHD----LDDLSL 248
Query: 166 RSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPA 225
R+ L ++ + ++A LAV++TNQ+ ++ N+ + + PA
Sbjct: 249 RTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQAL-----------------LVPA 291
Query: 226 LGIAWANCVNSRLF 239
LG +W + RL
Sbjct: 292 LGESWGHAATIRLI 305
>gi|119614840|gb|EAW94434.1| RAD51 homolog C (S. cerevisiae), isoform CRA_e [Homo sapiens]
Length = 380
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 45/255 (17%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T LL+ T C +D LGGG+P TE+ G GKTQ C+QL + Q+P
Sbjct: 86 TALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIP 145
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDH---------------NPC 105
GG++ ++++ TE F + R+ L+ H + H N
Sbjct: 146 ECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTLDNIL 205
Query: 106 DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKK 165
+I+ +LL + + F+ S +RL+++D IA FR D +DDL
Sbjct: 206 SHIYYFRCRDYTELLAQVYLLPDFLSEHSK----VRLVIVDGIAFPFRHD----LDDLSL 257
Query: 166 RSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPA 225
R+ L ++ + ++A LAV++TNQ+ ++ N+ + + PA
Sbjct: 258 RTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQAL-----------------LVPA 300
Query: 226 LGIAWANCVNSRLFL 240
LG +W + RL
Sbjct: 301 LGESWGHAATIRLIF 315
>gi|256071033|ref|XP_002571846.1| DNA repair protein RAD51 [Schistosoma mansoni]
gi|353228592|emb|CCD74763.1| putative DNA repair protein RAD51 [Schistosoma mansoni]
Length = 338
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITEL E +GKTQ C L ++ QLP GG LY+
Sbjct: 100 QLTTGSKELDKLLQGGIETGSITELFGEFRTGKTQICHTLAVTCQLPIDMGGGEGKCLYI 159
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + ++ D ++++ + + S +
Sbjct: 160 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARAYNTDHQMELLINAAAMMSESRYA-- 216
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + L +A FG+AV++TNQVV +
Sbjct: 217 ---LLIVDSATALYRTDYSG-RGELSARQMHLARFLRTLLRLADEFGVAVVITNQVVAQV 272
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G S P P G + +RL+L +
Sbjct: 273 D-------------GAAMFSADPKKPIGGNIMGHASTTRLYLRK 303
>gi|30578221|gb|AAP35107.1|AF486821_1 Rad51 [Entamoeba histolytica]
Length = 366
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 17 TEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSL 76
T + T G +D+ L GG SITEL E +GKTQ C QL ++ QL +GG ++
Sbjct: 124 TIRITTGSRELDKLLCGGFETGSITELFGEFRTGKTQLCHQLCVTCQLGIENGGTEGRAI 183
Query: 77 YLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNS 136
Y+ TE F RL Q++ + N + + V H+ + + ++ +
Sbjct: 184 YIDTEGTFRPERLTQIAEKY-GLNSEEALNNVAVARAHNTEHQMPLLQMASGLMAKERYG 242
Query: 137 RLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
L++IDS AL+R+D+ +L R K L+ +A F +AV++TNQVV
Sbjct: 243 -----LLIIDSATALYRTDYSG-RGELASRQMHLVKFLRALQRIADEFSVAVVLTNQVVA 296
Query: 197 LMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
++ + G G P G A+ +RL+L + +
Sbjct: 297 QVDGQASMFG------------GDTKKPVGGNIIAHASTTRLYLRKGK 332
>gi|405123640|gb|AFR98404.1| MmLim15 protein [Cryptococcus neoformans var. grubii H99]
Length = 330
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 94/196 (47%), Gaps = 14/196 (7%)
Query: 3 APMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSA 62
A +T + D T G +D LGGGI SITE+ E +GKTQ C L +S
Sbjct: 75 AFLTGTEIADRRANVVYITTGSKSVDAMLGGGIATQSITEVFGEYRTGKTQLCHTLCVST 134
Query: 63 QLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSN----DHNPCDYIFVQSVHSVDQ 118
QLP GG S Y+ TE F R+ ++ F + D+ C + S H D
Sbjct: 135 QLPEDQGGGSGKVAYIDTEGTFRPDRVRAVADRFGVDSNMALDNVLCARAW-SSEHQCDL 193
Query: 119 LLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLK 178
L+D+ + F++ + +L+++DSI LFR D+ +L +R + L+
Sbjct: 194 LVDLAIR---FVEERA-----YKLLIVDSIMNLFRQDYSG-RGELSERQQKLNQFLARLQ 244
Query: 179 AMAVGFGLAVLVTNQV 194
+A F +AV++TNQV
Sbjct: 245 KLAEEFNIAVVLTNQV 260
>gi|239608262|gb|EEQ85249.1| DNA repair protein [Ajellomyces dermatitidis ER-3]
Length = 652
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 98/184 (53%), Gaps = 22/184 (11%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P++D+ L GGI +TEL ESG GKTQF L L LS QLP + G S +LY TE
Sbjct: 175 PVLDQALAGGISTGYVTELAGESGCGKTQFLLHLLLSVQLPPPY-GTSQKALYFSTESDL 233
Query: 85 PMRRLHQL-----------SHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNS 133
P RL QL + RPS ++ + ++ ++D L+ I ++
Sbjct: 234 PTGRLSQLLEEHPIISTLPEESPRPSLEN-------ILAITTID--LESQDHILNYQIPV 284
Query: 134 SNSRLPIRLIVIDSIAALFRSDFD-NTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTN 192
+ SR + L+VIDSIAA +R++ D + +D L R++ K+ L+ +A +A++V N
Sbjct: 285 AVSRYNVGLVVIDSIAANYRAESDSDNVDGLLVRAWQLKKLGQFLRNLAANQNIAIVVAN 344
Query: 193 QVVD 196
QV D
Sbjct: 345 QVSD 348
>gi|327349451|gb|EGE78308.1| DNA repair protein [Ajellomyces dermatitidis ATCC 18188]
Length = 590
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 98/184 (53%), Gaps = 22/184 (11%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P++D+ L GGI +TEL ESG GKTQF L L LS QLP + G S +LY TE
Sbjct: 115 PVLDQALAGGISTGYVTELAGESGCGKTQFLLHLLLSVQLPPPY-GTSQKALYFSTESDL 173
Query: 85 PMRRLHQL-----------SHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNS 133
P RL QL + RPS ++ + ++ ++D L+ I ++
Sbjct: 174 PTGRLSQLLEEHPIISTLPEESPRPSLEN-------ILAITTID--LESQDHILNYQIPV 224
Query: 134 SNSRLPIRLIVIDSIAALFRSDFD-NTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTN 192
+ SR + L+VIDSIAA +R++ D + +D L R++ K+ L+ +A +A++V N
Sbjct: 225 AVSRYNVGLVVIDSIAANYRAESDSDNVDGLLVRAWQLKKLGQFLRNLAANQNIAIVVAN 284
Query: 193 QVVD 196
QV D
Sbjct: 285 QVSD 288
>gi|261203417|ref|XP_002628922.1| DNA repair protein [Ajellomyces dermatitidis SLH14081]
gi|239586707|gb|EEQ69350.1| DNA repair protein [Ajellomyces dermatitidis SLH14081]
Length = 591
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 98/184 (53%), Gaps = 22/184 (11%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P++D+ L GGI +TEL ESG GKTQF L L LS QLP + G S +LY TE
Sbjct: 115 PVLDQALAGGISTGYVTELAGESGCGKTQFLLHLLLSVQLPPPY-GTSQKALYFSTESDL 173
Query: 85 PMRRLHQL-----------SHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNS 133
P RL QL + RPS ++ + ++ ++D L+ I ++
Sbjct: 174 PTGRLSQLLEEHPIISTLPEESPRPSLEN-------ILAITTID--LESQDHILNYQIPV 224
Query: 134 SNSRLPIRLIVIDSIAALFRSDFD-NTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTN 192
+ SR + L+VIDSIAA +R++ D + +D L R++ K+ L+ +A +A++V N
Sbjct: 225 AVSRYNVGLVVIDSIAANYRAESDSDNVDGLLVRAWQLKKLGQFLRNLAANQNIAIVVAN 284
Query: 193 QVVD 196
QV D
Sbjct: 285 QVSD 288
>gi|348540387|ref|XP_003457669.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Oreochromis
niloticus]
Length = 358
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 42/231 (18%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGGIP ITE+ G GKTQ CLQL + Q+P GG+ +++ TE F +
Sbjct: 92 LDESLGGGIPVGKITEVCGVPGIGKTQLCLQLAVDVQVPQCFGGVEGQVMFIDTEGSFLL 151
Query: 87 RRLHQLSH------TFRPSNDHNPC-----------DYIFVQSVHSVDQLLDIMPKIESF 129
+R+ ++ + +D IF+ H +LL + + F
Sbjct: 152 QRVTDIAAAAVRHCSLLAEDDEQRAATETFTVETVLSNIFLVRCHDHVELLAELHLLPDF 211
Query: 130 IKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVL 189
+ IRL+VIDS+A FR F D+L +R+ L + L MA+ + ++V+
Sbjct: 212 LSQHPK----IRLLVIDSVAFPFRLLF----DELSQRTRLLNGVGQQLITMAINYNISVV 263
Query: 190 VTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
+TNQ+ +R G I PALG W + RL L
Sbjct: 264 ITNQM---------TTRIRDGQ--------SHIVPALGECWGHAPTIRLLL 297
>gi|26345474|dbj|BAC36388.1| unnamed protein product [Mus musculus]
Length = 384
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 45/255 (17%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T LL+ T C +D LGGGIP TE+ G GKTQ C+QL + Q+P
Sbjct: 95 TALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIP 154
Query: 66 SSHGGLSASSLYLHTEFPFPMRR-----------LHQLSHTFRPSNDH---------NPC 105
GG++ ++++ TE F + R LH ++ T N
Sbjct: 155 ECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEHQKALKDFTLENIL 214
Query: 106 DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKK 165
+I+ H +LL + + F+ + ++L++ID IA FR D ++DL
Sbjct: 215 SHIYYFRCHDYTELLAQVYLLPDFLSDHPK----VKLVIIDGIAFPFRHD----LEDLSL 266
Query: 166 RSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPA 225
R+ L ++ + ++A LAV++TNQ+ ++ N+ + + PA
Sbjct: 267 RTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQAL-----------------LVPA 309
Query: 226 LGIAWANCVNSRLFL 240
LG +W + RL
Sbjct: 310 LGESWGHAATIRLIF 324
>gi|397493033|ref|XP_003817418.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Pan paniscus]
Length = 337
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 110/254 (43%), Gaps = 45/254 (17%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T LL+ T C +D LGGG+P TE+ G GKTQ C+QL + Q+P
Sbjct: 77 TALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIP 136
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDH---------------NPC 105
GG++ ++++ TE F + R+ L+ H + H N
Sbjct: 137 ECFGGVAGEAVFIDTEGSFMVDRVVDLATACIEHLQLIAEKHKGEEHQKALEDFTLDNIL 196
Query: 106 DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKK 165
+I+ +LL + + F+ S +RL+++D IA FR D +DDL
Sbjct: 197 SHIYYFRCRDYTELLAQVYLLPDFLSEHSK----VRLVIVDGIAFPFRHD----LDDLSL 248
Query: 166 RSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPA 225
R+ L ++ + ++A LAV++TNQ+ ++ N+ + + PA
Sbjct: 249 RTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQAL-----------------LVPA 291
Query: 226 LGIAWANCVNSRLF 239
LG +W + RL
Sbjct: 292 LGESWGHAATIRLI 305
>gi|194382504|dbj|BAG64422.1| unnamed protein product [Homo sapiens]
Length = 337
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 110/254 (43%), Gaps = 45/254 (17%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T LL+ T C +D LGGG+P TE+ G GKTQ C+QL + Q+P
Sbjct: 77 TALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIP 136
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDH---------------NPC 105
GG++ ++++ TE F + R+ L+ H + H N
Sbjct: 137 ECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTLDNIL 196
Query: 106 DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKK 165
+I+ +LL + + F+ S +RL+++D IA FR D +DDL
Sbjct: 197 SHIYYFRCRDYTELLAQVYLLPDFLSEHSK----VRLVIVDGIAFPFRHD----LDDLSL 248
Query: 166 RSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPA 225
R+ L ++ + ++A LAV++TNQ+ ++ N+ + + PA
Sbjct: 249 RTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQAL-----------------LVPA 291
Query: 226 LGIAWANCVNSRLF 239
LG +W + RL
Sbjct: 292 LGESWGHAATIRLI 305
>gi|358332289|dbj|GAA50958.1| DNA repair protein RAD51 [Clonorchis sinensis]
Length = 341
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITEL E +GKTQ C L ++ QLP GG LY+
Sbjct: 103 QLTTGSKELDKLLQGGIETGSITELFGEFRTGKTQICHTLAVTCQLPIDMGGGEGKCLYI 162
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + ++ D ++++ + + S +
Sbjct: 163 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARAYNTDHQMELLINAAAMMSESRYA-- 219
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+V+DS AL+R+D+ +L R + L +A FG+AV++TNQVV +
Sbjct: 220 ---LLVVDSATALYRTDYSG-RGELSARQMHLARFLRTLLRLADEFGVAVVITNQVVAQV 275
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRN 243
+ G + P P G + +RL+L +
Sbjct: 276 D-------------GAAMFTADPKKPIGGNIMGHASTTRLYLRKG 307
>gi|147900484|ref|NP_001081236.1| DNA repair protein RAD51 homolog A [Xenopus laevis]
gi|2500105|sp|Q91918.1|RA51A_XENLA RecName: Full=DNA repair protein RAD51 homolog A; Short=xRAD51.1
gi|1054624|dbj|BAA07501.1| XRad51.1 [Xenopus laevis]
gi|57033002|gb|AAH88930.1| LOC397726 protein [Xenopus laevis]
Length = 336
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D+ L GG+ SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 98 QISTGSKELDKLLQGGVETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYI 157
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 158 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARAFNTDHQTQLLYQASAMMAESRYA-- 214
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 215 ---LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 270
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 271 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 301
>gi|213403772|ref|XP_002172658.1| DNA repair protein RAD51 [Schizosaccharomyces japonicus yFS275]
gi|212000705|gb|EEB06365.1| DNA repair protein RAD51 [Schizosaccharomyces japonicus yFS275]
Length = 370
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GG+ SITEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 129 TTGSKQLDTLLQGGVETGSITELFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLYIDT 188
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N D + ++ D L+++ + + + S S
Sbjct: 189 EGTFRPVRLLAVAERY-GLNGEEVLDNVAYARAYNADHQLELLQQAANMMAESRFS---- 243
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS AL+R+DF +L R + L+ +A FG+AV++TNQVV
Sbjct: 244 -LLVVDSCTALYRTDFSG-RGELSARQMHLARFMRTLQRLADEFGIAVVITNQVV 296
>gi|16716605|ref|NP_444499.1| DNA repair protein RAD51 homolog 3 [Mus musculus]
gi|81902682|sp|Q924H5.1|RA51C_MOUSE RecName: Full=DNA repair protein RAD51 homolog 3; Short=R51H3;
AltName: Full=RAD51 homolog C; AltName: Full=RAD51-like
protein 2
gi|14276845|gb|AAK58420.1|AF324883_1 RAD51L2/RAD51C protein [Mus musculus]
gi|60422796|gb|AAH90648.1| RAD51 homolog c (S. cerevisiae) [Mus musculus]
gi|148683867|gb|EDL15814.1| Rad51 homolog c (S. cerevisiae), isoform CRA_b [Mus musculus]
Length = 366
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 45/255 (17%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T LL+ T C +D LGGGIP TE+ G GKTQ C+QL + Q+P
Sbjct: 77 TALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIP 136
Query: 66 SSHGGLSASSLYLHTEFPFPMRR-----------LHQLSHTFRPSNDH---------NPC 105
GG++ ++++ TE F + R LH ++ T N
Sbjct: 137 ECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEHQKALKDFTLENIL 196
Query: 106 DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKK 165
+I+ H +LL + + F+ + ++L++ID IA FR D ++DL
Sbjct: 197 SHIYYFRCHDYTELLAQVYLLPDFLSDHPK----VQLVIIDGIAFPFRHD----LEDLSL 248
Query: 166 RSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPA 225
R+ L ++ + ++A LAV++TNQ+ ++ N+ + + PA
Sbjct: 249 RTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQAL-----------------LVPA 291
Query: 226 LGIAWANCVNSRLFL 240
LG +W + RL
Sbjct: 292 LGESWGHAATIRLIF 306
>gi|195108597|ref|XP_001998879.1| GI23388 [Drosophila mojavensis]
gi|193915473|gb|EDW14340.1| GI23388 [Drosophila mojavensis]
Length = 347
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 11/177 (6%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ LGGGI SITE+ E GKTQ C L ++ QLP S G +LY+ T
Sbjct: 108 TTGSKELDKLLGGGIETGSITEIFGEFRCGKTQICHTLAVTCQLPISQNGGEGKALYIDT 167
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + ++ D + H+ DQ ++ + S +
Sbjct: 168 EGTFRPERLSAIAQRYN-MDEAAVLDNVACARAHNTDQQTQLVQMAAGMMFESRYA---- 222
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSF--LFFKISGMLKAMAVGFGLAVLVTNQVV 195
LI++DS AL+RS++ + +++ LF + ML+ +A FG+AV++TNQV
Sbjct: 223 -LIIVDSAMALYRSEYIGRGELAARQNHLGLFLR---MLQRLADEFGVAVVITNQVT 275
>gi|187954697|gb|AAI41035.1| RAD51 homolog c (S. cerevisiae) [Mus musculus]
Length = 366
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 45/255 (17%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T LL+ T C +D LGGGIP TE+ G GKTQ C+QL + Q+P
Sbjct: 77 TALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIP 136
Query: 66 SSHGGLSASSLYLHTEFPFPMRR-----------LHQLSHTFRPSNDH---------NPC 105
GG++ ++++ TE F + R LH ++ T N
Sbjct: 137 ECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEHQKALKDFTLENIL 196
Query: 106 DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKK 165
+I+ H +LL + + F+ + ++L++ID IA FR D ++DL
Sbjct: 197 SHIYYFRCHDYTELLAQVYLLPDFLSDHPK----VQLVIIDGIAFPFRHD----LEDLSL 248
Query: 166 RSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPA 225
R+ L ++ + ++A LAV++TNQ+ ++ N+ + + PA
Sbjct: 249 RTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQAL-----------------LVPA 291
Query: 226 LGIAWANCVNSRLFL 240
LG +W + RL
Sbjct: 292 LGESWGHAATIRLIF 306
>gi|73669826|ref|YP_305841.1| DNA repair and recombination protein RadA [Methanosarcina barkeri
str. Fusaro]
gi|121695787|sp|Q46A31.1|RADA_METBF RecName: Full=DNA repair and recombination protein RadA
gi|72396988|gb|AAZ71261.1| DNA repair protein [Methanosarcina barkeri str. Fusaro]
Length = 325
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 24/191 (12%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T GC D +GGGI +ITEL E GSGKTQ Q ++ Q+ HGGL+ S + +
Sbjct: 81 KLTTGCMEFDEMMGGGIETQAITELYGEFGSGKTQLAHQFAVNVQMDREHGGLNGSVIII 140
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHS------------VDQLLDIMPKI 126
TE F R+ Q+ F+Q++H VD D+ ++
Sbjct: 141 DTENTFRPERIAQMVKGLSEKYGMELDPEEFLQNIHVARAYNSNHQILLVDSATDLANEL 200
Query: 127 ESFIKNSSNSRLPIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLKAMAVGF 184
K P+RL+++DS+ A FR+++ T+ D +++ L + G+L+ + F
Sbjct: 201 REMGK-------PVRLLIVDSLMAHFRAEYVGRGTLADRQQK--LNKHMHGLLRFGDL-F 250
Query: 185 GLAVLVTNQVV 195
+V+VTNQV+
Sbjct: 251 NASVVVTNQVM 261
>gi|148223319|ref|NP_001080559.1| DNA repair protein RAD51 homolog B [Xenopus laevis]
gi|2500106|sp|Q91917.1|RA51B_XENLA RecName: Full=DNA repair protein RAD51 homolog B; Short=xRAD51.2
gi|1054622|dbj|BAA07500.1| XRad51.2 [Xenopus laevis]
gi|28302165|gb|AAH46650.1| Rad51 protein [Xenopus laevis]
gi|80477159|gb|AAI08487.1| Rad51 protein [Xenopus laevis]
Length = 336
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 20/221 (9%)
Query: 22 VGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTE 81
G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+ TE
Sbjct: 101 TGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYIDTE 160
Query: 82 FPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIR 141
F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 GTFRPERLLAVAERYGLSGS-DVLDNVAYARAFNTDHQTQLLYQASAMMAESRYA----- 214
Query: 142 LIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPN 201
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV ++
Sbjct: 215 LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVD-- 271
Query: 202 EGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
G + P P G A+ +RL+L +
Sbjct: 272 -----------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 301
>gi|121701483|ref|XP_001269006.1| DNA repair protein (Rad57), putative [Aspergillus clavatus NRRL 1]
gi|119397149|gb|EAW07580.1| DNA repair protein (Rad57), putative [Aspergillus clavatus NRRL 1]
Length = 886
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 99/184 (53%), Gaps = 11/184 (5%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P +D L GG+P +TE+ ESGSGKTQF L L L+ QLP GL ++Y+ TE
Sbjct: 448 PTLDELLNGGVPVGYLTEVTGESGSGKTQFLLGLLLAVQLPEPR-GLGKGAIYISTEAAL 506
Query: 85 PMRRLHQL--SHTFRPS--NDHNPCDYIFVQSVHSVDQL-LDIMPKIESFIKNSSNSRLP 139
RL QL SH + + D P ++++ S++ + L+ I ++ + +R
Sbjct: 507 ATSRLSQLLESHPYLSTLPEDRAPT----LENILSINAMDLETQDHILNYQLPVAITRYN 562
Query: 140 IRLIVIDSIAALFRSDF-DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
+ L+VIDSI A +R++ + + L RS K+ +L+ +A +A++V NQV D
Sbjct: 563 VGLVVIDSITANYRAEHTSHNVQGLSTRSSELAKLGQLLRNLATAHNIAIVVANQVSDRF 622
Query: 199 EPNE 202
+P E
Sbjct: 623 DPLE 626
>gi|319411653|emb|CBQ73697.1| DNA repair protein RAD51 [Sporisorium reilianum SRZ2]
Length = 354
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGG+ SITEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 103 TTGSKNLDAILGGGMETGSITELYGEFRTGKSQLCHTLAVTCQLPVDMGGGEGKCLYIDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N D + ++ D L ++ + + + S S
Sbjct: 163 EGTFRPVRLLAVAERY-GLNGEEVLDNVAYARAYNADHQLQLLMQASAMMAESRFS---- 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS+ +L+R+DF +L R K L +A FG+AV++TNQVV
Sbjct: 218 -LLIVDSLTSLYRTDFSGR-GELSARQMHLAKFLRGLMRLADEFGVAVVITNQVV 270
>gi|355715056|gb|AES05211.1| RAD51-like protein [Mustela putorius furo]
Length = 338
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 218 ---LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 274 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 304
>gi|353236565|emb|CCA68557.1| related to DMC1-Meiosis-specific protein [Piriformospora indica DSM
11827]
Length = 355
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 20/232 (8%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
+ G +D LGGGI SI+E+ E +GKTQ +++ AQLP+ GG Y+
Sbjct: 118 ISTGSKAVDAILGGGIQTQSISEVYGEFRTGKTQLAHTMSVLAQLPADMGGGGGKVAYID 177
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
TE F R+ ++ F + + ++ ++ +S Q+ I F +
Sbjct: 178 TEGTFRPDRIRAIADRFGVDGETALSNILYARAFNSEHQMELINEATTRFAEEKD----- 232
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
+L+++DSI ALFR+DF +L +R + L +A + LA+L+TNQV +
Sbjct: 233 YKLMIVDSIMALFRTDFSG-RGELSERQQKLASMLSKLSKIAEEYNLAILLTNQV----Q 287
Query: 200 PNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL--SRNEDFVVR 249
+ G + +G + P G A+ +R+FL R E+ V +
Sbjct: 288 SDPGAT--------MTFVAGGALKPIGGHILAHASATRMFLRKGRGEERVAK 331
>gi|322780402|gb|EFZ09890.1| hypothetical protein SINV_00924 [Solenopsis invicta]
Length = 310
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ LGGGI SITEL E SGK+Q C L ++ QLP S GG LY+ T
Sbjct: 73 TTGSKELDKLLGGGIETGSITELFGEFRSGKSQLCHTLAVNCQLPISMGGAEGKCLYIDT 132
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ ++ N + D + ++ D ++ + ++ +
Sbjct: 133 ENTFRPERLIAVAEKYKI-NGPSVLDNVACARAYNTDHQTQLL-----MLASAMMTEARY 186
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS L+R+D+ +L R + ML +A +G+AV++TNQVV
Sbjct: 187 ALLVVDSATGLYRTDYSG-RGELGARQNHLGRFLRMLLRLADEYGIAVVITNQVV 240
>gi|431896119|gb|ELK05537.1| DNA repair protein RAD51 like protein 1 [Pteropus alecto]
Length = 339
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 218 ---LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 274 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 304
>gi|548664|sp|P36601.1|RAD51_SCHPO RecName: Full=DNA repair protein rhp51; AltName: Full=RAD51 homolog
gi|297522|emb|CAA80399.1| Rec A-like Protein [Schizosaccharomyces pombe]
gi|395378|emb|CAA80879.1| Rad51-like protein [Schizosaccharomyces pombe]
Length = 365
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GG+ SITEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 125 TTGSKQLDTLLQGGVETGSITELFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLYIDT 184
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N D + ++ D L+++ + + + S S
Sbjct: 185 EGTFRPVRLLAVADRY-GLNGEEVLDNVAYARAYNADHQLELLQQAANMMSESRFS---- 239
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS AL+R+DF +L R + L+ +A FG+AV++TNQVV
Sbjct: 240 -LLVVDSCTALYRTDFSG-RGELSARQMHLARFMRTLQRLADEFGIAVVITNQVV 292
>gi|52548595|gb|AAU82444.1| recombinase [uncultured archaeon GZfos17F1]
Length = 324
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 124/291 (42%), Gaps = 59/291 (20%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K +GC +D +GGG +ITE+ E GSGKTQ QL ++ QLP GGL S + +
Sbjct: 81 KLKLGCTEVDNMMGGGFETQAITEVYGEFGSGKTQIAHQLAVNVQLPVGLGGLYGSVIII 140
Query: 79 HTEFPFPMRRLHQLSH--TFRPSNDHNPCDY---IFVQSVHSVDQLLDIMPKIESFIKNS 133
TE F R+ + R +++P ++ I V ++ + + +M +
Sbjct: 141 DTENTFRPDRIKSMVEGAAKRYETEYDPEEFLKNIHVARAYNSNHQILLMDTASELADSL 200
Query: 134 SNSRLPIRLIVIDSIAALFRSDF--DNTMDD----LKKRSFLFFKISGMLKAMAVGFGLA 187
++ +P+RL+++DS+ A FR+++ T+ D L K + + AM
Sbjct: 201 RDTDMPVRLLIVDSLTAHFRAEYVGRGTLADRQQKLNKHLHALMRFGDLNNAM------- 253
Query: 188 VLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFV 247
V VTNQV + +P+ + G P P G + RL+L +
Sbjct: 254 VFVTNQV--MSKPD------------AFF--GDPTKPIGGHILGHTSTFRLYLRK----- 292
Query: 248 VRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
+ +R +V +P+L D + +T+EG+F
Sbjct: 293 --------------------SKGDKRVAKLVDSPNLPDGEALYTVTQEGLF 323
>gi|52549421|gb|AAU83270.1| recombinase [uncultured archaeon GZfos27B6]
Length = 315
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G +T + +L+ + K T G D LGGG+ ++TE E GSGKTQ QL +
Sbjct: 60 IGGFVTGEKILERRQSVGKLTTGSKSFDELLGGGLETQAMTEFYGEFGSGKTQIAHQLAV 119
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLL 120
+ QLP GGL+ S++ + TE F R+ ++ + + ++ +S Q+L
Sbjct: 120 NVQLPPEKGGLNGSAIMVDTENTFRPERIKDMAEGAELDYEDVLKNIHVARAYNSNHQIL 179
Query: 121 DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDF 156
++ K + ++ ++ P+RL++IDS A FRS++
Sbjct: 180 -LVEKAKEIAEDLKDTEKPVRLMIIDSATAHFRSEY 214
>gi|157822405|ref|NP_001102674.1| DNA repair protein RAD51 homolog 1 [Rattus norvegicus]
gi|149022997|gb|EDL79891.1| similar to DNA repair protein RAD51 homolog 1 (predicted) [Rattus
norvegicus]
gi|197246432|gb|AAI68875.1| RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae) [Rattus
norvegicus]
Length = 339
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 218 ---LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 274 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 304
>gi|19114794|ref|NP_593882.1| RecA family recombinase Rhp51 [Schizosaccharomyces pombe 972h-]
gi|397843|dbj|BAA02963.1| SpRad51 [Schizosaccharomyces pombe]
gi|7708593|emb|CAB90141.1| RecA family recombinase Rhp51 [Schizosaccharomyces pombe]
Length = 365
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GG+ SITEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 125 TTGSKQLDTLLQGGVETGSITELFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLYIDT 184
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N D + ++ D L+++ + + + S S
Sbjct: 185 EGTFRPVRLLAVADRY-GLNGEEVLDNVAYARAYNADHQLELLQQAANMMSESRFS---- 239
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS AL+R+DF +L R + L+ +A FG+AV++TNQVV
Sbjct: 240 -LLVVDSCTALYRTDFSG-RGELSARQMHLARFMRTLQRLADEFGIAVVITNQVV 292
>gi|353236570|emb|CCA68562.1| related to DNA repair protein RAD51 [Piriformospora indica DSM
11827]
Length = 339
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 86/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITEL E +GK+Q C L ++ QLP+S GG LY+ T
Sbjct: 99 TTGSKQLDTLLGGGIETGSITELFGEFRTGKSQICHTLAVTCQLPTSMGGGEGKCLYIDT 158
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N D + ++ D ++ + + S
Sbjct: 159 EGTFRPVRLLAVAERY-GLNGEEVLDNVAYARAYNADHQQQLLVTASALMAESR-----F 212
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF N +L R K L +A +G+AV+VTNQV+
Sbjct: 213 ALLIVDSCTALYRTDF-NGRGELSARQGHLGKFLRTLLRLADEYGIAVVVTNQVM 266
>gi|149692472|ref|XP_001503572.1| PREDICTED: DNA repair protein RAD51 homolog 1-like isoform 1 [Equus
caballus]
Length = 339
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 218 ---LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 274 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 304
>gi|114051383|ref|NP_001039644.1| DNA repair protein RAD51 homolog 1 [Bos taurus]
gi|301754892|ref|XP_002913265.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Ailuropoda
melanoleuca]
gi|410961504|ref|XP_003987322.1| PREDICTED: DNA repair protein RAD51 homolog 1 isoform 1 [Felis
catus]
gi|426232982|ref|XP_004010496.1| PREDICTED: DNA repair protein RAD51 homolog 1 isoform 1 [Ovis
aries]
gi|116255982|sp|Q2KJ94.1|RAD51_BOVIN RecName: Full=DNA repair protein RAD51 homolog 1
gi|86821651|gb|AAI05459.1| RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae) [Bos taurus]
gi|296483320|tpg|DAA25435.1| TPA: DNA repair protein RAD51 homolog 1 [Bos taurus]
gi|440911678|gb|ELR61319.1| DNA repair protein RAD51-like protein 1 [Bos grunniens mutus]
Length = 339
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 218 ---LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 274 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 304
>gi|344293992|ref|XP_003418703.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Loxodonta
africana]
Length = 339
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 218 ---LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 274 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 304
>gi|327400087|ref|YP_004340926.1| DNA repair and recombination protein radA [Archaeoglobus veneficus
SNP6]
gi|327315595|gb|AEA46211.1| DNA repair and recombination protein radA [Archaeoglobus veneficus
SNP6]
Length = 328
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 127/283 (44%), Gaps = 51/283 (18%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G +D LGGG+ SITEL E GSGKTQ C QL ++ QLP GGL S + +
Sbjct: 90 KITTGSKALDELLGGGVETQSITELFGEFGSGKTQICHQLAVNVQLPRDLGGLEGSVIVI 149
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLL--DIMPKIESFIKNSSNS 136
TE F R+ Q++ + + Q+ +S Q+L D ++ + +K
Sbjct: 150 DTENTFRPERIIQMAEAKGLDPEEVLRNIYVAQAYNSNHQMLLVDNAKELANKLKKEGKQ 209
Query: 137 RLPIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
++L+++DS+ A FR+++ T+ D +++ L + +++ + F A++VTNQV
Sbjct: 210 ---VKLLIVDSLMAHFRAEYVGRGTLADRQQK--LNKHLHDLMRFGEI-FNAAIVVTNQV 263
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
+P+ + G P P G A+ R++L +
Sbjct: 264 --QAKPD------------TFF--GDPTKPVGGHIVAHTATFRIYLRK------------ 295
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
S E V R ++ +PHL + F++T G+
Sbjct: 296 ------SKGELRVAR-------LIDSPHLPEGEAVFKVTERGI 325
>gi|348579949|ref|XP_003475741.1| PREDICTED: DNA repair protein RAD51 homolog 1-like isoform 1 [Cavia
porcellus]
Length = 339
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 218 ---LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 274 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 304
>gi|395377|emb|CAA80878.1| RecA-like protein [Schizosaccharomyces pombe]
Length = 358
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GG+ SITEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 118 TTGSKQLDTLLQGGVETGSITELFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLYIDT 177
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N D + ++ D L+++ + + + S S
Sbjct: 178 EGTFRPVRLLAVADRY-GLNGEEVLDNVAYARAYNADHQLELLQQAANMMSESRFS---- 232
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS AL+R+DF +L R + L+ +A FG+AV++TNQVV
Sbjct: 233 -LLVVDSCTALYRTDFSG-RGELSARQMHLARFMRTLQRLADEFGIAVVITNQVV 285
>gi|350537799|ref|NP_001233686.1| DNA repair protein RAD51 homolog 1 [Cricetulus griseus]
gi|2500103|sp|P70099.1|RAD51_CRIGR RecName: Full=DNA repair protein RAD51 homolog 1
gi|1552258|emb|CAA69384.1| rad51 [Cricetulus griseus]
gi|344253210|gb|EGW09314.1| DNA repair protein RAD51-like 1 [Cricetulus griseus]
Length = 339
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 218 ---LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 274 D-------------GAAMFTADPKKPIGGNIIAHASTTRLYLRK 304
>gi|6755276|ref|NP_035364.1| DNA repair protein RAD51 homolog 1 [Mus musculus]
gi|585772|sp|Q08297.1|RAD51_MOUSE RecName: Full=DNA repair protein RAD51 homolog 1; AltName:
Full=RAD51 homolog A
gi|397831|dbj|BAA02961.1| MmRad51 [Mus musculus]
gi|407349|dbj|BAA02718.1| Rad51 protein [Mus musculus]
gi|12847236|dbj|BAB27489.1| unnamed protein product [Mus musculus]
gi|20073272|gb|AAH27384.1| RAD51 homolog (S. cerevisiae) [Mus musculus]
gi|26345412|dbj|BAC36357.1| unnamed protein product [Mus musculus]
gi|74185375|dbj|BAE30162.1| unnamed protein product [Mus musculus]
gi|74185412|dbj|BAE30179.1| unnamed protein product [Mus musculus]
gi|148695989|gb|EDL27936.1| RAD51 homolog (S. cerevisiae), isoform CRA_b [Mus musculus]
gi|1093114|prf||2102359A RAD51-like protein
Length = 339
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 218 ---LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 274 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 304
>gi|148683866|gb|EDL15813.1| Rad51 homolog c (S. cerevisiae), isoform CRA_a [Mus musculus]
Length = 386
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 45/255 (17%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T LL+ T C +D LGGGIP TE+ G GKTQ C+QL + Q+P
Sbjct: 97 TALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIP 156
Query: 66 SSHGGLSASSLYLHTEFPFPMRR-----------LHQLSHTFRPSNDH---------NPC 105
GG++ ++++ TE F + R LH ++ T N
Sbjct: 157 ECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEHQKALKDFTLENIL 216
Query: 106 DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKK 165
+I+ H +LL + + F+ + ++L++ID IA FR D ++DL
Sbjct: 217 SHIYYFRCHDYTELLAQVYLLPDFLSDHPK----VQLVIIDGIAFPFRHD----LEDLSL 268
Query: 166 RSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPA 225
R+ L ++ + ++A LAV++TNQ+ ++ N+ + + PA
Sbjct: 269 RTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQAL-----------------LVPA 311
Query: 226 LGIAWANCVNSRLFL 240
LG +W + RL
Sbjct: 312 LGESWGHAATIRLIF 326
>gi|50978688|ref|NP_001003043.1| DNA repair protein RAD51 homolog 1 [Canis lupus familiaris]
gi|75047603|sp|Q8MKI8.1|RAD51_CANFA RecName: Full=DNA repair protein RAD51 homolog 1; AltName:
Full=cRad51
gi|20387091|dbj|BAB91246.1| Rad51 [Canis lupus familiaris]
Length = 339
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 218 ---LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 274 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 304
>gi|333988516|ref|YP_004521123.1| DNA repair and recombination protein radA [Methanobacterium sp.
SWAN-1]
gi|333826660|gb|AEG19322.1| DNA repair and recombination protein radA [Methanobacterium sp.
SWAN-1]
Length = 311
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 122/279 (43%), Gaps = 47/279 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G D +GGGI SITE+ E GSGK+Q ++ ++ QLP GGL +++
Sbjct: 78 RLTTGSTGFDELIGGGIETQSITEVFGEFGSGKSQISHEIAVTVQLPPEKGGLGGECVFI 137
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ F + ++ +S Q+L + KI I+ ++
Sbjct: 138 DTENTFRPERIKQIADGFELDVEEVLQKIHIARAFNSSHQIL-MADKINELIQKGTD--- 193
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
I+L+++DS+ A FR+++ + L R + L+ +A + +AV VTNQV
Sbjct: 194 -IKLVIVDSLTAHFRAEYVG-RETLATRQQKLNQHLHTLQTIANTYNVAVFVTNQVQS-- 249
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+P+ + G P G A+ R++L + G+
Sbjct: 250 KPD------------AFF--GSPTKAVGGHILAHAATYRIWLKK--------------GL 281
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
G +R +V +PHL + F+I EGV
Sbjct: 282 AG-----------KRIARLVDSPHLPEGEAVFKIVTEGV 309
>gi|238814375|ref|NP_001154949.1| RecA homolog RAD51 [Nasonia vitripennis]
Length = 340
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +DR LGGGI SITE+ E +GK+Q C L ++ QLP GG A +Y+ T
Sbjct: 103 TTGSAELDRLLGGGIETGSITEIFGEFRTGKSQLCHTLAVNCQLPVDMGGAEAKCIYIDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + D + ++ D ++ K + + S SR
Sbjct: 163 EGTFRPERLIAVAERYNINGD-SVLDNVATARAYNSDHQTQLLIKASAMM---SESRYG- 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF +L R + +L +A FG AV++TNQVV
Sbjct: 218 -LLIVDSATALYRTDFAG-RGELAARQMHLARFLRLLLRLADEFGCAVVITNQVV 270
>gi|303391399|ref|XP_003073929.1| DNA repair protein Rad51 [Encephalitozoon intestinalis ATCC 50506]
gi|303303078|gb|ADM12569.1| DNA repair protein Rad51 [Encephalitozoon intestinalis ATCC 50506]
Length = 334
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 19/222 (8%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GG SITE+ E +GKTQ C + ++ QLP GG ++Y+ T
Sbjct: 97 TTGSSEVDKLLNGGFESGSITEIFGEFRTGKTQLCHTVAVTCQLPPEQGGGGGKAMYIDT 156
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F D D I ++ D ++ K + + S S
Sbjct: 157 EGTFRSERLIPIAERFGLDPDE-VMDNISYARAYNSDHQSQLLIKASAMMSESKYS---- 211
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
+++IDS AL+R+DF +L R K L +A F +AV++TNQVV +
Sbjct: 212 -VLIIDSATALYRTDFSG-RGELGARQLHLAKYLRSLVNLAETFRVAVIITNQVVSNV-- 267
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+G G+ G++ +PI G A+ +RL+L +
Sbjct: 268 -DGAVGMFAGDI------KKPIG---GNIMAHASTTRLYLRK 299
>gi|91773967|ref|YP_566659.1| DNA repair and recombination protein RadA [Methanococcoides
burtonii DSM 6242]
gi|121691598|sp|Q12UG7.1|RADA_METBU RecName: Full=DNA repair and recombination protein RadA
gi|91712982|gb|ABE52909.1| DNA repair and recombination protein RadA [Methanococcoides
burtonii DSM 6242]
Length = 325
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 7/144 (4%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K + GC D +GGGI SITE+ E GSGKTQ QL ++ QLP GGL S + +
Sbjct: 81 KLSTGCTEFDEMMGGGIETQSITEMYGEFGSGKTQIAHQLAVNVQLPPEQGGLGGSVIMI 140
Query: 79 HTEFPFPMRRLHQLSHTFRPSN--DHNPCDYI----FVQSVHSVDQLLDIMPKIESFIKN 132
TE F R+ Q+ + +++P +++ ++ +S Q+L ++
Sbjct: 141 DTENTFRPERIAQMVKGISDKHGIEYDPEEFLKNIHVARAFNSNHQIL-LVDSANELANE 199
Query: 133 SSNSRLPIRLIVIDSIAALFRSDF 156
N+ +P++L+++DS+ A FR+++
Sbjct: 200 LKNTEMPVKLLIVDSLTAHFRAEY 223
>gi|115610811|ref|XP_788683.2| PREDICTED: DNA repair protein RAD51 homolog 1-like
[Strongylocentrotus purpuratus]
Length = 335
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C + ++ QLP +GG LY+
Sbjct: 97 QVTTGSKELDKLLQGGIETGSITEIFGEFRTGKTQLCHTMAVTCQLPIDNGGGEGKCLYI 156
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + H+ D ++ + + + S +
Sbjct: 157 DTEGTFRPERLIAVADRYNLSGS-DVLDNVAYARAHNSDHQSQLLLQASAMMAESRYA-- 213
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + L +A +G+AV++TNQVV +
Sbjct: 214 ---LLIVDSATALYRTDYSG-RGELASRQMHLGRFLRTLLRLADEYGVAVVITNQVVAQV 269
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 270 D-------------GAAMFTSDPKKPIGGHIMAHASTTRLYLRK 300
>gi|410080818|ref|XP_003957989.1| hypothetical protein KAFR_0F02570 [Kazachstania africana CBS 2517]
gi|372464576|emb|CCF58854.1| hypothetical protein KAFR_0F02570 [Kazachstania africana CBS 2517]
Length = 465
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 29/212 (13%)
Query: 10 LLDNPLTTEKCTVGCPI------IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQ 63
+L+N +C + PI ID LGGGI ITE+ ES +GK+QF +QL+L+ Q
Sbjct: 71 VLNNVNQLRECAIPHPITTGDISIDEALGGGIFTKCITEVFGESSTGKSQFLMQLSLAVQ 130
Query: 64 LPSSHGGLSASSLYLHTEFPFPMRRLHQLSHT---FRPSNDHNPCDYI-----FVQSVHS 115
+P GG A +Y+ TE P +R+ + + F+ S+ Y V H
Sbjct: 131 MPKDCGGAEAKCVYITTEGDLPTQRIQDMIESREEFKKSSISQSNIYTVSCNDLVTQEHI 190
Query: 116 VDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFD-NTMDDLKKRSFLFFKIS 174
++ L I+ + S+ I+L++IDSI+ R + + N+ + + + +++
Sbjct: 191 LNVQLPILLE---------QSKGAIKLVIIDSISHHMRVELESNSFKESQDNRYYVSRLA 241
Query: 175 GMLKAMAVGFGLAVLVTNQV-----VDLMEPN 201
L +A + LAV+V NQV ++L EP
Sbjct: 242 EALLKLANKYNLAVVVANQVGDKPFIELTEPQ 273
>gi|335441210|ref|ZP_08561930.1| DNA repair and recombination protein RadA [Halorhabdus tiamatea
SARL4B]
gi|334888251|gb|EGM26552.1| DNA repair and recombination protein RadA [Halorhabdus tiamatea
SARL4B]
Length = 348
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 28/204 (13%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K + G +D LGGG+ SITE+ E G+GK+Q QL ++ QLP+ HGGL SS+++
Sbjct: 82 KLSWGVEEVDELLGGGVETQSITEVYGEFGAGKSQVTHQLAVNVQLPAEHGGLEGSSIFI 141
Query: 79 HTEFPFPMRRLHQLS--------------HTFRPSNDHNP-------------CDYIFVQ 111
+E F R+ Q+ H + +P D I V
Sbjct: 142 DSEDTFRPERIEQMVEGLEDDVIADTMVLHDVAEEGEADPGDDALFDDLVESILDKIHVA 201
Query: 112 SVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFF 171
+ + + + K + + P+RL+ +DS+ A FR+++ + ++ L
Sbjct: 202 KAFNSNHQILLAEKAQELASEGQDEAFPVRLLAVDSLTAHFRAEYVGRGELADRQQKLNK 261
Query: 172 KISGMLKAMAVGFGLAVLVTNQVV 195
+ +++ + AV+VTNQV
Sbjct: 262 HLHDLMRVGDLN-NTAVVVTNQVA 284
>gi|288559373|ref|YP_003422859.1| DNA repair and recombination protein RadA [Methanobrevibacter
ruminantium M1]
gi|288542083|gb|ADC45967.1| DNA repair and recombination protein RadA [Methanobrevibacter
ruminantium M1]
Length = 311
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 6/176 (3%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D +GGGI SITE+ E GSGK+Q +L ++ QLP GGL +++
Sbjct: 78 RITTGSKNVDELIGGGIETQSITEVFGEFGSGKSQISHELAVTVQLPKERGGLEGECVFI 137
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ + ++ +S Q+L + KI I++ N
Sbjct: 138 DTENTFRPERIEQIADACGIDREEALQRIHIARAFNSSHQIL-MAEKINELIQSGVN--- 193
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+RL+++DS+ A FR+++ + L R + L+ +A + +AV +TNQV
Sbjct: 194 -VRLVIVDSLMAHFRAEYVG-RESLATRQQKLNQHLHALQQIANTYNVAVFLTNQV 247
>gi|410671201|ref|YP_006923572.1| DNA repair and recombination protein RadA [Methanolobus
psychrophilus R15]
gi|409170329|gb|AFV24204.1| DNA repair and recombination protein RadA [Methanolobus
psychrophilus R15]
Length = 325
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 28/193 (14%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K + GC + +GGGI SITE+ E GSGKTQ QL ++ QLP GGL S + +
Sbjct: 81 KLSTGCVEFNEMMGGGIETQSITEMYGEFGSGKTQVAHQLAVNVQLPRELGGLDGSVIII 140
Query: 79 HTEFPFPMRRLHQ----LSHTFRPSNDHNPCDYIFVQSVH------SVDQLLDIMPKIES 128
TE F R+ Q LS + DH F++++H S Q+L + +E
Sbjct: 141 DTENTFRPERIQQMVEGLSEKYGQEYDHEE----FLKNIHVARAFNSNHQILLVDSAME- 195
Query: 129 FIKNSSNSRLPIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLKAMAVGFG- 185
N+ P+RL+++DS+ A FR+++ T+ D +++ L + G+ + FG
Sbjct: 196 LANELKNTEKPVRLLIVDSLTAHFRAEYIGRGTLADRQQK--LNKHLHGLQR-----FGD 248
Query: 186 ---LAVLVTNQVV 195
V+VTNQV+
Sbjct: 249 LLNACVVVTNQVM 261
>gi|325969248|ref|YP_004245440.1| DNA repair and recombination protein RadA [Vulcanisaeta moutnovskia
768-28]
gi|323708451|gb|ADY01938.1| DNA repair and recombination protein RadA [Vulcanisaeta moutnovskia
768-28]
Length = 318
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 110/228 (48%), Gaps = 30/228 (13%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
ID L GG+ +I E E G+GKTQ C QL+++ QL GG+ +++YL TE F
Sbjct: 92 IDELLQGGLEPKAIYEFAGEFGTGKTQLCHQLSVTVQLSQDKGGVGGAAVYLDTEEAFSP 151
Query: 87 RRLHQLSHTFRPSNDHNP---CDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLI 143
R+ ++ F D +P D I+V V + L D + + +N+ RLI
Sbjct: 152 GRIINIAQRF----DLDPNETLDNIYVIKVINAADLEDRIKFDVVKLVEQANA----RLI 203
Query: 144 VIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEG 203
V+DSI AL+R++F + L +R I L +A + + V++TNQV+D+ P
Sbjct: 204 VVDSIIALYRAEFKGR-ERLAERQQRLNYILDWLMRIAKLYNVYVVLTNQVLDV--PMGY 260
Query: 204 VNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRN-EDFVVRE 250
+ R PA G A+ V RLFL ++ ED V E
Sbjct: 261 IEIKR---------------PAGGNVLAHAVTHRLFLRKSKEDVKVME 293
>gi|344210477|ref|YP_004794797.1| DNA repair and recombination protein RadA [Haloarcula hispanica
ATCC 33960]
gi|343781832|gb|AEM55809.1| DNA repair and recombination protein RadA [Haloarcula hispanica
ATCC 33960]
Length = 349
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 29/205 (14%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K + G +D LGGG+ SITE+ E G+GK+Q QL+++ QLP+ HGGL S++++
Sbjct: 82 KLSWGVDEVDDLLGGGVETQSITEVYGEFGAGKSQVTHQLSVNVQLPAEHGGLEGSAIFV 141
Query: 79 HTEFPFPMRRLHQ---------------LSHTFRPSNDHNPCD-------------YIFV 110
+E F R+ Q L +D +P D I V
Sbjct: 142 DSEDTFRPERIEQMVKGLADEVLADTMVLHGIVEEGDDADPTDEDLLDDLVASVLEKIHV 201
Query: 111 QSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLF 170
+ + + + K + S + P+RL+ +DS+ A FR+++ + ++ L
Sbjct: 202 AKAFNSNHQILLAEKAQEIASESQDEEFPVRLLAVDSLTAHFRAEYVGRGELADRQQKLN 261
Query: 171 FKISGMLKAMAVGFGLAVLVTNQVV 195
+ +++ + AV+VTNQV
Sbjct: 262 KHLHDLMRVGDLN-NTAVVVTNQVA 285
>gi|296422275|ref|XP_002840687.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636908|emb|CAZ84878.1| unnamed protein product [Tuber melanosporum]
Length = 408
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 120/288 (41%), Gaps = 69/288 (23%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T P +DR L IP +ITE ESGSGKTQ L LTL+ QL S GGL ++Y+
Sbjct: 84 ITTHSPTLDRLLNK-IPTQAITEFAGESGSGKTQILLLLTLTVQLSPSRGGLGRPAVYIS 142
Query: 80 TEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNS 136
TE P RL Q+ + P + D +F S+ D L+ I +
Sbjct: 143 TEAPLSTLRLIQMKNYISRDLPVGEQPTTDKVF--SIVCSD--LETQEHIIRYQLPVLVQ 198
Query: 137 RLPIRLIVIDSIAALFRSDFDNTMDDLKK------------------------------- 165
+ + L+VIDSIAA FR++F+ M+ KK
Sbjct: 199 KFNVGLVVIDSIAANFRAEFERPMNRNKKLRSSNTSTPSSSPSSSSTGAPSAGARHGSQM 258
Query: 166 --RSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNL----------- 212
R +++ L+ +A+ LAV+V+NQV D P+ +
Sbjct: 259 AQRGKEMVRLAATLRHLAINHNLAVVVSNQVSDKFTPSASSRTPLSSSSSARDRDDDDDD 318
Query: 213 ------------GC---LYSSGRPICPALGIAWANCVNSRLFLSRNED 245
GC L G+ PALG+ WAN + +R+ + ++ED
Sbjct: 319 IMSLDFQLKWFAGCDEGLEGGGK--IPALGLVWANLLATRVVIRKSED 364
>gi|281349378|gb|EFB24962.1| hypothetical protein PANDA_005235 [Ailuropoda melanoleuca]
Length = 253
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 92/169 (54%), Gaps = 12/169 (7%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+ C S+TE+ G GKTQFC+ +++ A LP++ GGL + +Y+ TE F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFSA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VH-----SVDQLLDIMPKIESFIKNSSNSRLPI 140
RL +++ + P + + S VH S D++L + +E I + +
Sbjct: 150 ERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELSCDEVLRRIDSLEEEIISKG-----V 204
Query: 141 RLIVIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGLAV 188
+L++IDS+A++ R +FD + ++++R+ + + LK +A F + V
Sbjct: 205 KLVIIDSVASVVRKEFDTQLQGNMRERNKFLAREAASLKYLAEEFSIPV 253
>gi|399949905|gb|AFP65561.1| DNA repair protein Rad51 [Chroomonas mesostigmatica CCMP1168]
Length = 331
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ LGGGI SITEL E +GKTQ C +++S QL GG +LY+ T
Sbjct: 95 TTGSRNLDKILGGGIETGSITELFGEFRTGKTQLCHNISVSCQLSFEQGGGEGRALYIDT 154
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R+ ++ F+ N + D I ++ D ++++ + + + +
Sbjct: 155 EGTFRPERIVSIAERFKL-NGQDVLDNIAFARAYNTDHQMELLNQACAMMAERRYA---- 209
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
++++DS AL+R+D+ +L R K +L+ + FG+A L+TNQV+
Sbjct: 210 -VVIVDSATALYRTDYIG-RGELAPRQQHLAKFLRILQRLCDEFGVAALITNQVI 262
>gi|307595014|ref|YP_003901331.1| Rad51 domain-containing protein [Vulcanisaeta distributa DSM 14429]
gi|307550215|gb|ADN50280.1| Rad51 domain protein [Vulcanisaeta distributa DSM 14429]
Length = 318
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 110/228 (48%), Gaps = 30/228 (13%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
ID L GG+ +I E E G+GKTQ C QL+++ QL GG+ +++YL TE F
Sbjct: 92 IDDLLQGGLEPKAIYEFAGEFGTGKTQLCHQLSVTVQLSQDKGGVGGAAVYLDTEEAFSP 151
Query: 87 RRLHQLSHTFRPSNDHNP---CDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLI 143
R+ ++ F D +P D I+V V + L D + + +N+ +LI
Sbjct: 152 NRIVNIAQRF----DLDPNEALDNIYVIKVINAADLEDRIKFDVVKLVEQANA----KLI 203
Query: 144 VIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEG 203
V+DSI AL+R++F + L +R I L +A + + V++TNQV+D+ P
Sbjct: 204 VVDSIIALYRAEFKGR-ERLAERQQRLNYILDWLMRIAKVYNVYVVLTNQVLDV--PMGY 260
Query: 204 VNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRN-EDFVVRE 250
+ R PA G A+ V RLFL ++ ED V E
Sbjct: 261 IEVKR---------------PAGGNVLAHAVTHRLFLKKSKEDIKVME 293
>gi|330915672|ref|XP_003297116.1| hypothetical protein PTT_07429 [Pyrenophora teres f. teres 0-1]
gi|311330355|gb|EFQ94774.1| hypothetical protein PTT_07429 [Pyrenophora teres f. teres 0-1]
Length = 338
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 107/233 (45%), Gaps = 21/233 (9%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K + G +D LGGG SI+E+ E GKTQ +++ QLP GG Y+
Sbjct: 98 KISTGSKALDAVLGGGFQTMSISEVFGEFRCGKTQLSHTMSVITQLPKDMGGAEGKVAYI 157
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ F + + + ++V+S Q+ + E F+ N
Sbjct: 158 DTEGTFRPERIAQIAERFGVDPETAQDNITYARAVNSEHQMELLNKVAEFFVSNE----- 212
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
RL++IDSI ALFR D+ +L +R + L +A F +AVL+TNQV
Sbjct: 213 -YRLLIIDSIMALFRVDYTG-RGELNERQQKLNQFLSKLTHVAEEFNVAVLLTNQV---- 266
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL--SRNEDFVVR 249
+ + G + L G + GR P G A+ +R+ L R E+ V +
Sbjct: 267 QSDPGASALFAG------ADGRK--PVGGHILAHASATRILLRKGRGEERVAK 311
>gi|448663902|ref|ZP_21683888.1| DNA repair and recombination protein RadA [Haloarcula amylolytica
JCM 13557]
gi|445775218|gb|EMA26230.1| DNA repair and recombination protein RadA [Haloarcula amylolytica
JCM 13557]
Length = 349
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 29/205 (14%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K + G +D LGGG+ SITE+ E G+GK+Q QL ++ QLP+ HGGL S++++
Sbjct: 82 KLSWGVDEVDDLLGGGVETQSITEVYGEFGAGKSQVTHQLAVNVQLPAEHGGLEGSAIFV 141
Query: 79 HTEFPFPMRRLHQ---------------LSHTFRPSNDHNPCD-------------YIFV 110
+E F R+ Q L +D +P D I V
Sbjct: 142 DSEDTFRPERIEQMVKGLADEVLADTLVLHGIVEEEDDADPTDEDLLDDLVASVLEKIHV 201
Query: 111 QSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLF 170
+ + + + K + S + P+RL+ +DS+ A FR+++ + ++ L
Sbjct: 202 AKAFNSNHQILLAEKAQEIASESQDEEFPVRLLAVDSLTAHFRAEYVGRGELADRQQKLN 261
Query: 171 FKISGMLKAMAVGFGLAVLVTNQVV 195
+ +++ + AV+VTNQV
Sbjct: 262 KHLHDLMRVGDLN-NTAVVVTNQVA 285
>gi|149246169|ref|XP_001527554.1| DNA repair protein RAD51 [Lodderomyces elongisporus NRRL YB-4239]
gi|146447508|gb|EDK41896.1| DNA repair protein RAD51 [Lodderomyces elongisporus NRRL YB-4239]
Length = 362
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 90/176 (51%), Gaps = 9/176 (5%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE+ E +GK+Q C L+++ QLP GG LY+ T
Sbjct: 122 TTGSKQLDTLLGGGIETGSITEVFGEFRTGKSQLCHTLSVTCQLPIDMGGGEGKCLYIDT 181
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
E F RL ++ R + N C D + ++ + L+++ + S S
Sbjct: 182 EGTFRPNRLVSIAE--RYGLNANDCLDNVAYARAYNAEHQLNLLNLAAEMMAESRFS--- 236
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DSI +L+R+D+ +L R K L+ +A FG+AV++TNQVV
Sbjct: 237 --LLIVDSIMSLYRTDYAG-RGELSARQTSVAKFMRTLQRLADEFGIAVVITNQVV 289
>gi|403376234|gb|EJY88098.1| Meiotic recombination protein DMC1, putative [Oxytricha trifallax]
Length = 286
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 124/290 (42%), Gaps = 47/290 (16%)
Query: 10 LLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHG 69
+++ +K + G D+ L GG+ ITE E +GKTQ L ++AQLP S G
Sbjct: 39 IMEKRKKIKKISTGSATFDKLLQGGVESQGITEAFGEFRTGKTQLAHTLCVTAQLPKSQG 98
Query: 70 GLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLD-IMPKIES 128
G LY+ TE F R+ Q++ F D + I V +VD L IM +
Sbjct: 99 GGEGKVLYIDTENTFRPERIKQIARRFELDPDE-VLNNIMVGRSFTVDSLNTLIMQAGGA 157
Query: 129 FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAV 188
I++ L+VIDSI A FR D+ +L +R + K+ ++ ++ F +AV
Sbjct: 158 MIEDQ------FSLLVIDSIMAPFRVDYSGR-GELSERQQVLGKVLSKIQKISEQFNVAV 210
Query: 189 LVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVV 248
++NQV + +P + + P P G A+ +RL+L +
Sbjct: 211 FLSNQV--MADPG-----------ASMTYAADPKKPIGGNILAHASTTRLYLRK------ 251
Query: 249 RENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
G G E VC+ + +P + + C F+I+ G+
Sbjct: 252 -----------GKG-EQRVCK-------IFDSPSIPEGECIFQISEGGII 282
>gi|296005023|ref|XP_001349356.2| meiotic recombination protein dmc1-like protein [Plasmodium
falciparum 3D7]
gi|13876949|gb|AAK43698.1|AF356553_1 meiotic recombination protein DMC1-like protein [Plasmodium
falciparum]
gi|225632246|emb|CAD51205.2| meiotic recombination protein dmc1-like protein [Plasmodium
falciparum 3D7]
Length = 347
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 124/294 (42%), Gaps = 45/294 (15%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T L+ K T G + D+ LGGGI ITEL E+ GKTQ C L ++AQL
Sbjct: 95 ITANELVQKRSKVLKITTGSTVFDQTLGGGIESMCITELFGENRCGKTQVCHTLAVTAQL 154
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMP 124
P S G + Y+ TE F ++ +++ + + D I + + L ++
Sbjct: 155 PKSLNGGNGKVCYIDTEGTFRPEKVCKIAERYGLDGEA-VLDNILYARAFTHEHLYQLLA 213
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
I + P L+V+DSI +LFR DF +L +R K +L ++ F
Sbjct: 214 -----ISAAKMCEEPFALLVVDSIISLFRVDFSG-RGELSERQQKLNKTMSILSKLSEQF 267
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
+A+L+TNQV+ + G + N P+ P G + RL L +
Sbjct: 268 NIAILITNQVM----SDPGATMTFIAN---------PMKPVGGHVIGHASTIRLSLRK-- 312
Query: 245 DFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
G G + VC+ V AP+L + C F+++ +GV
Sbjct: 313 ---------------GKGDQR-VCK-------VYDAPNLPEVECIFQLSDKGVI 343
>gi|386363695|emb|CCC21080.1| putative rad51 protein, partial [Rhizophagus clarus]
Length = 233
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 4/165 (2%)
Query: 33 GGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQL 92
GGI SITE+ E +GK+Q C ++++ QLP GG +Y+ TE F RL +
Sbjct: 1 GGIETGSITEIFGEFRTGKSQICHTMSVACQLPIELGGAEGRCVYIDTEGTFRPERLVSI 60
Query: 93 SHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIR--LIVIDSIAA 150
+ F ++ + D + + ++ D + ++ + + SS + IR L+++DS A
Sbjct: 61 AERFGLVSE-DALDNVAIARAYNTDHQMTLLLHAAAMMAESSYALFEIRFALMIVDSATA 119
Query: 151 LFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 120 LYRTDFSGR-GELAARQMHLAKFLRNLQRLADEFGIAVVITNQVV 163
>gi|326426794|gb|EGD72364.1| hypothetical protein PTSG_00384 [Salpingoeca sp. ATCC 50818]
Length = 364
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 33/230 (14%)
Query: 28 DRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMR 87
D LGGGI +TE G+GKTQ +QL+++ QLP + GGL+ +Y+ TE F
Sbjct: 90 DELLGGGIEPRKLTEFCGAPGAGKTQLAMQLSVNCQLPHAFGGLAGQVVYIDTEGSFMAD 149
Query: 88 RLHQLSHTFRPSNDHNPCDYIFVQ-SVHSVDQLLDIMP--KIESFIKN-SSNSRLP---- 139
R +++ R Q ++ SV+++L+ + ++ ++I+ + + LP
Sbjct: 150 RFKEIAEHTRSELQPRASRRRKKQAALPSVEEMLEGVHVFRVHNYIEQIAVLNALPAFQI 209
Query: 140 ----IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
++L+VIDSIA FR+DF D+ R+ L + L ++A + VL+TNQ+
Sbjct: 210 DHPQVKLVVIDSIAFHFRADF----HDMGLRTRLLNGAAQQLLSLATQHNIVVLITNQMT 265
Query: 196 DLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
++ + PALG WA+ +R+ L+ + D
Sbjct: 266 TTIKDGTAT-----------------LIPALGETWAHACTTRVVLAFDGD 298
>gi|871832|dbj|BAA08255.1| recA-like protein [Arabidopsis thaliana]
Length = 342
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 130/296 (43%), Gaps = 54/296 (18%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT + L K T GC +D LGGGI ++ITE E SGKTQ L ++ QL
Sbjct: 93 MTGSDALIKRKLVVKITTGCQALDDLLGGGIETSAITEAFGEFRSGKTQLAHTLCVTTQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P++ G + Y+ TE F R+ ++ F + I+ ++ H + LL
Sbjct: 153 PTNMKGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ S P R++++DSI ALFR DF + ++ L +S ++K +A
Sbjct: 213 LAAKM---------SEEPFRILIVDSIIALFRVDFTGRGELADRQQKLAQMLSRLIK-IA 262
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F +AV +TNQV+ +P G ++ S P PA G A+ RL
Sbjct: 263 EEFNVAVYMTNQVI--ADPG-----------GGMFIS-DPKKPAGGHVLAHAATIRLLFR 308
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ + + VC+ V AP+LA+ S F+IT+ G+
Sbjct: 309 KGK------------------GDTRVCK-------VYDAPNLAEAS--FQITQGGI 337
>gi|169781702|ref|XP_001825314.1| DNA repair protein rhp51 [Aspergillus oryzae RIB40]
gi|238498508|ref|XP_002380489.1| DNA repair protein RAD51, putative [Aspergillus flavus NRRL3357]
gi|83774056|dbj|BAE64181.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693763|gb|EED50108.1| DNA repair protein RAD51, putative [Aspergillus flavus NRRL3357]
gi|391865352|gb|EIT74636.1| DNA repair protein RAD51/RHP55 [Aspergillus oryzae 3.042]
Length = 348
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 104 TTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D L ++ + + + S
Sbjct: 164 EGTFRPVRLLAVAQRYGLVGEE-VLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS AL+R+DF N +L R K L+ +A FG+AV++TNQVV
Sbjct: 219 -LLVVDSATALYRTDF-NGRGELSTRQTHLAKFMRTLQRLADEFGIAVVITNQVV 271
>gi|169843884|ref|XP_001828666.1| Rah1 [Coprinopsis cinerea okayama7#130]
gi|3237296|gb|AAC23703.1| Rah1 [Coprinopsis cinerea]
gi|116510275|gb|EAU93170.1| Rah1 [Coprinopsis cinerea okayama7#130]
Length = 343
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI +ITEL E +GK+Q C L ++ QLP S GG LY+ T
Sbjct: 104 TTGSKQLDALLGGGIETGAITELFGEFRTGKSQICHTLAVTCQLPVSMGGGEGKCLYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F N D + ++ D ++ + + S SR
Sbjct: 164 EGTFRPVRLLAVAERF-GLNGEEVLDNVAYARAYNADHQQALLTSASALM---SESRFC- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF +L R K L+ +A FG+AV+VTNQV+
Sbjct: 219 -LLIVDSCTALYRTDFSG-RGELSSRQTHLGKFLRTLQRLADEFGIAVVVTNQVM 271
>gi|307212541|gb|EFN88264.1| DNA repair protein RAD51-like protein 1 [Harpegnathos saltator]
Length = 340
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 89/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITEL E SGK+Q C L ++ QLP S GG LY+ T
Sbjct: 103 TTGSKELDNLLGGGIETGSITELFGEFRSGKSQLCHTLAVNCQLPISMGGAEGRCLYIDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ ++ S D + D + + D ++ + + + + +
Sbjct: 163 ENGFRPERLTAVAERYKISGD-SVLDNVACARAFNTDHQTQLVVQASAMMTEARYA---- 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L++IDS +L+R+D+ +L +R + ML +A G+AV++TNQVV
Sbjct: 218 -LLIIDSATSLYRTDYCG-RGELSERQQHLARFLRMLLRIADEHGIAVVITNQVV 270
>gi|71028890|ref|XP_764088.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351042|gb|EAN31805.1| hypothetical protein, conserved [Theileria parva]
Length = 286
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 113/236 (47%), Gaps = 32/236 (13%)
Query: 23 GCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEF 82
G ID+ L GG+ + E+ SGSGKTQF L LT + + LY++T
Sbjct: 31 GVKEIDQALNGGLLLGKVCEIYGPSGSGKTQFALSLTSEVLINNLIHSKDYVVLYIYTNG 90
Query: 83 PFPMRRLHQLSHT--------FRPSNDHNPCDY---IFVQSVHSVDQL-LDIMPKIESFI 130
FP+ RL+++ + + + N ++V+ V D+L K+E +
Sbjct: 91 TFPIERLNEILRSKYEDAKGLIKADENFNTSQLLKNLYVEKVTDNDELYFTFTSKLEEML 150
Query: 131 KNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLV 190
+++ ++LIVIDSIAALFR+ + + + S K+ ++K ++ + L +L
Sbjct: 151 QHN------VKLIVIDSIAALFRTVQNESYHGQRINSIT--KVGLIMKRISHEYNLLILA 202
Query: 191 TNQVVDLMEPNEGVNGLRVGNLGCLY-SSGRPICPALGIAWANCVNSRLFLSRNED 245
NQ GV L N+ L SG I PALG AW C+NSR+ ++R D
Sbjct: 203 INQA-------SGVFNL--SNIPFLNPRSG--IKPALGEAWERCINSRILVTRRRD 247
>gi|134118469|ref|XP_772121.1| hypothetical protein CNBM1660 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254728|gb|EAL17474.1| hypothetical protein CNBM1660 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T + D T G +D LGGGI SITE+ E +GKTQ C L +S QL
Sbjct: 77 LTGTEIADRRANVVYITTGSKSVDAMLGGGIATQSITEVFGEYRTGKTQLCHTLCVSTQL 136
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSN----DHNPCDYIFVQSVHSVDQLL 120
P GG S Y+ TE F R+ ++ F + D+ C + S H D L+
Sbjct: 137 PEDQGGGSGKVAYIDTEGTFRPDRVRAVADRFGVDSNMALDNVLCARAW-SSEHQCDLLV 195
Query: 121 DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAM 180
D+ + F++ + +L+++DSI LFR D+ +L +R + L+ +
Sbjct: 196 DLAIR---FVEERA-----YKLLIVDSIMNLFRQDYSG-RGELSERQQKLNQFLARLQKL 246
Query: 181 AVGFGLAVLVTNQV 194
A F +A+++TNQV
Sbjct: 247 AEEFNIAIVLTNQV 260
>gi|126277684|ref|XP_001370830.1| PREDICTED: DNA repair protein RAD51 homolog 1-like isoform 1
[Monodelphis domestica]
Length = 339
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEIFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 218 ---LLIVDSSTALYRTDYSG-RGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 274 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 304
>gi|58262116|ref|XP_568468.1| meiotic recombination-related protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57230641|gb|AAW46951.1| meiotic recombination-related protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 323
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T + D T G +D LGGGI SITE+ E +GKTQ C L +S QL
Sbjct: 70 LTGTEIADRRANVVYITTGSKSVDAMLGGGIATQSITEVFGEYRTGKTQLCHTLCVSTQL 129
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSN----DHNPCDYIFVQSVHSVDQLL 120
P GG S Y+ TE F R+ ++ F + D+ C + S H D L+
Sbjct: 130 PEDQGGGSGKVAYIDTEGTFRPDRVRAVADRFGVDSNMALDNVLCARAW-SSEHQCDLLV 188
Query: 121 DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAM 180
D+ + F++ + +L+++DSI LFR D+ +L +R + L+ +
Sbjct: 189 DLAIR---FVEERA-----YKLLIVDSIMNLFRQDYSG-RGELSERQQKLNQFLARLQKL 239
Query: 181 AVGFGLAVLVTNQV 194
A F +A+++TNQV
Sbjct: 240 AEEFNIAIVLTNQV 253
>gi|312383584|gb|EFR28621.1| hypothetical protein AND_03252 [Anopheles darlingi]
Length = 338
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ LGGGI SITE+ E +GKTQ C L ++ QLP S G LY+
Sbjct: 100 QLTTGSKELDKLLGGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPVSQNGGEGKCLYI 159
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL + ++ + D + ++ D + ++ + + S +
Sbjct: 160 DTEGTFRPERLLATAERYKLVGT-DVLDNVAYARAYNTDHQMQLLMLASAMMVESRYA-- 216
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
LI++DS +L+R+D+ +L R K ML +A FG+AV++TNQVV
Sbjct: 217 ---LIIVDSATSLYRTDYCG-RGELAARQGHMAKFLRMLLRLADEFGVAVIITNQVV 269
>gi|126179861|ref|YP_001047826.1| DNA repair and recombination protein RadA [Methanoculleus
marisnigri JR1]
gi|166218763|sp|A3CWU4.1|RADA_METMJ RecName: Full=DNA repair and recombination protein RadA
gi|125862655|gb|ABN57844.1| DNA repair and recombination protein RadA [Methanoculleus
marisnigri JR1]
Length = 324
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 111/252 (44%), Gaps = 29/252 (11%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G T +++LD +K P D +GGG+ +ITE+ E GSGK+Q Q+ +
Sbjct: 63 IGGFKTGRDILDKRKDIKKLRTLVPEFDELVGGGLETQAITEVYGEFGSGKSQLVHQMAV 122
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQ----LSHTFRPSNDHNPCDYIFVQSVHSV 116
+AQLP GGL +Y+ TE F R+ Q L + I V HS
Sbjct: 123 NAQLPEELGGLGGGVIYVDTENTFRPERIEQMLNGLPEEAEIGEIEEVLERIHVARAHSS 182
Query: 117 DQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGM 176
D + ++ + S P+RL VIDS+ +LFRS++ ++ L + +
Sbjct: 183 DHQMLLLETARELANDLRTSDYPVRLFVIDSLTSLFRSEYAGRGTLAPRQQKLNRHMHDL 242
Query: 177 LKAM----AVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWAN 232
LK + AVG LVTNQV+ N G L+ G P P G +
Sbjct: 243 LKLIDDHNAVG-----LVTNQVMS--------------NPGILF--GDPTKPIGGNIVGH 281
Query: 233 CVNSRLFLSRNE 244
RL+L +++
Sbjct: 282 TATFRLYLRKSK 293
>gi|7328532|dbj|BAA92869.1| Pprad51 [Penicillium paxilli]
Length = 347
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 104 TTGSKRLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F + D + ++ D L ++ + + + S
Sbjct: 164 EGTFRPVRLLAVAQRFGLVGEE-VLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF N +L R K L+ +A FG+AV++TNQVV
Sbjct: 219 -LLIVDSATALYRTDF-NGRGELSSRQTHLAKFLRTLQRLADEFGVAVVITNQVV 271
>gi|225683324|gb|EEH21608.1| DNA repair protein Rhp57 [Paracoccidioides brasiliensis Pb03]
Length = 592
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 97/187 (51%), Gaps = 22/187 (11%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P++D L GGI ITE ESGSGKTQF L L LS QLP + G S +LY TE
Sbjct: 115 PVLDAALAGGISTGYITEFAGESGSGKTQFLLHLLLSVQLPPPY-GTSRKALYFSTESDL 173
Query: 85 PMRRLHQL-----------SHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNS 133
P RL QL + RPS ++ + S+ ++D L+ I ++
Sbjct: 174 PTGRLSQLLDEHPLLSTLPEASARPSLEN-------ILSITTID--LETQDHILNYQIPV 224
Query: 134 SNSRLPIRLIVIDSIAALFRSDFD-NTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTN 192
+ SR I L+VIDSI A +R++ D + + L R++ K+ L+ +A +A++V N
Sbjct: 225 AVSRYNIGLVVIDSITANYRAESDSDNVPGLLARAWQLKKLGRFLRNLAAKENIAIVVAN 284
Query: 193 QVVDLME 199
QV D ++
Sbjct: 285 QVSDQIQ 291
>gi|432330176|ref|YP_007248319.1| DNA repair and recombination protein RadA [Methanoregula formicicum
SMSP]
gi|432136885|gb|AGB01812.1| DNA repair and recombination protein RadA [Methanoregula formicicum
SMSP]
Length = 325
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G T +++ + K + P +D LGGG+ +ITE+ E GSGK+Q Q+ +
Sbjct: 65 VGGFKTGKDIFEQRKDVRKLSFRVPELDTLLGGGLETQAITEMYGEFGSGKSQIVHQMAV 124
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSN---DHNPCDYIFVQSVHSVD 117
+ QLP GGL+ S +Y+ TE F R+ Q+ + N D I + H+ D
Sbjct: 125 NVQLPEEEGGLNGSVIYIDTENTFRPERIEQMVNGLGLDNIPDTQEFLDNIHIARAHTSD 184
Query: 118 QLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDN------TMDDLKKRSFLFF 171
+ ++ + P++L +IDS+ A FR+++ L + F
Sbjct: 185 HQMLLIDNSRELATELKENGKPVKLFIIDSLTAHFRAEYAGRGTLAARQQKLNRHMHELF 244
Query: 172 KISGMLKAMAVGFGLAVLVTNQVV 195
K+ + + AVG LVTNQV+
Sbjct: 245 KL--IDEHNAVG-----LVTNQVM 261
>gi|116754195|ref|YP_843313.1| DNA repair and recombination protein RadA [Methanosaeta thermophila
PT]
gi|116665646|gb|ABK14673.1| DNA repair and recombination protein RadA [Methanosaeta thermophila
PT]
Length = 322
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 97/185 (52%), Gaps = 12/185 (6%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G D LGGG+ +I EL E GSGKTQ QL ++ QLP GGL+ S++ +
Sbjct: 79 KITTGSRNFDELLGGGMETQAIVELYGEFGSGKTQVAHQLAVNVQLPPELGGLNGSAIII 138
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVH------SVDQLLDIMPKIESFIKN 132
TE F R+ Q+ R +D F++++H S Q+L +E ++
Sbjct: 139 DTENTFRPERISQMVMGLRAIDDREWRPEDFLKNIHVARAYNSNHQILLAESAME-LAES 197
Query: 133 SSNSRLPIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLV 190
+ P+RL+++DS+ A FR+++ T+ D +++ L + +++ + L +LV
Sbjct: 198 LRETEHPVRLLIVDSVTAHFRAEYVGRGTLADRQQK--LNKHLHDLMRFADLNNAL-ILV 254
Query: 191 TNQVV 195
TNQV+
Sbjct: 255 TNQVM 259
>gi|226286929|gb|EEH42442.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 592
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 97/187 (51%), Gaps = 22/187 (11%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P++D L GGI ITE ESGSGKTQF L L LS QLP + G S +LY TE
Sbjct: 115 PVLDAALAGGISTGYITEFAGESGSGKTQFLLHLLLSVQLPPPY-GTSRKALYFSTESDL 173
Query: 85 PMRRLHQL-----------SHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNS 133
P RL QL + RPS ++ + S+ ++D L+ I ++
Sbjct: 174 PTGRLSQLLDEHPLLSTLPEASARPSLEN-------ILSITTID--LETQDHILNYQIPV 224
Query: 134 SNSRLPIRLIVIDSIAALFRSDFD-NTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTN 192
+ SR I L+VIDSI A +R++ D + + L R++ K+ L+ +A +A++V N
Sbjct: 225 AVSRYNIGLVVIDSITANYRAESDSDNVPGLLARAWQLKKLGRFLRNLAAKENIAIVVAN 284
Query: 193 QVVDLME 199
QV D ++
Sbjct: 285 QVSDQIQ 291
>gi|123408121|ref|XP_001303137.1| Meiotic recombination protein DMC1/LIM15 homolog [Trichomonas
vaginalis G3]
gi|121884492|gb|EAX90207.1| Meiotic recombination protein DMC1/LIM15 homolog, putative
[Trichomonas vaginalis G3]
Length = 338
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 88/185 (47%), Gaps = 7/185 (3%)
Query: 11 LDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGG 70
L N + T G +D+ LGGG+ SITE+ E +GKTQ C L ++AQLP S G
Sbjct: 94 LKNRSKVIRITSGSTELDKLLGGGVESMSITEVFGEFRTGKTQLCHTLCVTAQLPLSQSG 153
Query: 71 LSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFI 130
++ TE F R+ ++ F D + ++ ++ Q+ I
Sbjct: 154 GQGKVCFIDTEGTFRPERIPVIAQRFGVDGDEALENILYARAFTHEQQMQLIQAAAAQMA 213
Query: 131 KNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLV 190
++ RL++IDSI ALFR DF +L +R ++ L +A F +A+ +
Sbjct: 214 EDQ------YRLLIIDSITALFRVDFSG-RGELAERQQTLGQMMAALTKLASEFNIAIFI 266
Query: 191 TNQVV 195
TNQV+
Sbjct: 267 TNQVM 271
>gi|448629900|ref|ZP_21672795.1| DNA repair and recombination protein RadA [Haloarcula vallismortis
ATCC 29715]
gi|445757321|gb|EMA08676.1| DNA repair and recombination protein RadA [Haloarcula vallismortis
ATCC 29715]
Length = 349
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 29/205 (14%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K + G +D LGGG+ SITE+ E G+GK+Q QL ++ QLP+ HGGL S++++
Sbjct: 82 KLSWGVDEVDELLGGGVETQSITEVYGEFGAGKSQVTHQLAVNVQLPAEHGGLEGSAIFV 141
Query: 79 HTEFPFPMRRLHQ---------------LSHTFRPSNDHNPCD-------------YIFV 110
+E F R+ Q L D +P D I V
Sbjct: 142 DSEDTFRPERIEQMVKGLDDEVLADTMTLHGIVEEEADADPTDEDLLDDLVASVLEKIHV 201
Query: 111 QSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLF 170
+ + + + K + S + P+RL+ +DS+ A FR+++ + ++ L
Sbjct: 202 AKAFNSNHQILLAEKAQEIASESQDEEFPVRLLAVDSLTAHFRAEYVGRGELADRQQKLN 261
Query: 171 FKISGMLKAMAVGFGLAVLVTNQVV 195
+ +++ + AV+VTNQV
Sbjct: 262 KHLHDLMRVGDLN-NTAVVVTNQVA 285
>gi|115394440|gb|ABI97152.1| Rad51 [Pneumocystis murina]
gi|115394442|gb|ABI97153.1| Rad51 [Pneumocystis murina]
Length = 343
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 7/181 (3%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 105 TTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLYIDT 164
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N D + ++ D L ++ + + + S S
Sbjct: 165 EGTFRPTRLLAVADRY-GLNGEEVLDNVAYARAYNADHQLQLLGQAANMMAESRFS---- 219
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+++DS +L+R+DF +L R K L+ +A +G+AV++TNQVV ++
Sbjct: 220 -LLIVDSATSLYRTDFAG-RGELSARQMHLAKFLRTLQRLADEYGIAVVITNQVVAQVDG 277
Query: 201 N 201
N
Sbjct: 278 N 278
>gi|448508687|ref|XP_003865980.1| Rad51 protein [Candida orthopsilosis Co 90-125]
gi|380350318|emb|CCG20539.1| Rad51 protein [Candida orthopsilosis Co 90-125]
Length = 368
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 123/278 (44%), Gaps = 46/278 (16%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGG+ SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 127 TTGSKQLDTLLGGGVETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLYIDT 186
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
E F RL ++ + S N C D + ++ + L+++ + S S
Sbjct: 187 EGTFRPNRLVSIAERYGLSP--NDCLDNVAYARAYNAEHQLNLLHLAAQMMAESRFS--- 241
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
L+++DSI +L+R+D+ +L R K L+ +A FG+AV++TNQVV
Sbjct: 242 --LLIVDSIMSLYRTDYAG-RGELSARQTSVAKFMRTLQRLADEFGIAVVITNQVV---- 294
Query: 200 PNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVG 259
+V + +Y+ P P G A+ +RL L +
Sbjct: 295 -------AQVDGMSGMYNPD-PKKPIGGNIIAHASTTRLSLKK----------------- 329
Query: 260 GSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
G G E +C+ + +P L ++ C F I +G+
Sbjct: 330 GRG-EQRICK-------IYDSPCLPESDCVFAIYEDGI 359
>gi|14669856|dbj|BAB62025.1| RiLIM15B [Oryza sativa]
Length = 344
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 124/297 (41%), Gaps = 52/297 (17%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT +LL + + T G +D LGGGI ITE E SGKTQ L +S QL
Sbjct: 93 MTGSDLLIKRKSVVRITTGSQALDELLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 153 PIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P RL+++DS+ ALFR DF +L KR ++ L +A
Sbjct: 213 LAAKM---------AEEPFRLLIVDSVIALFRVDFSGR-GELAKRQQKLAQMLSRLTKIA 262
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F +AV +TNQV+ +P G+ + + P PA G A+ RL L
Sbjct: 263 EEFNVAVYITNQVI--ADPG---GGMFITD---------PKKPAGGHVLAHAATIRLMLR 308
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
+ + E VC+ + AP+L + F++T G+
Sbjct: 309 KGK------------------GEQRVCK-------IFDAPNLPEGEAVFQVTSGGIM 340
>gi|115394436|gb|ABI97150.1| Rad51 [Pneumocystis carinii]
gi|115394438|gb|ABI97151.1| Rad51 [Pneumocystis carinii]
Length = 343
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 7/181 (3%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 105 TTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLYIDT 164
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N D + ++ D L ++ + + + S S
Sbjct: 165 EGTFRPTRLLAVADRY-GLNGEEVLDNVAYARAYNADHQLQLLGQAANMMAESRFS---- 219
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+++DS +L+R+DF +L R K L+ +A +G+AV++TNQVV ++
Sbjct: 220 -LLIVDSATSLYRTDFAG-RGELSARQMHLAKFLRTLQRLADEYGIAVVITNQVVAQVDG 277
Query: 201 N 201
N
Sbjct: 278 N 278
>gi|449328634|gb|AGE94911.1| DNA repair protein rad51 like-protein [Encephalitozoon cuniculi]
Length = 334
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 19/222 (8%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GG SITE+ E +GKTQ C + ++ QLP GG ++Y+ T
Sbjct: 97 TTGSSEVDKLLSGGFESGSITEIFGEFRTGKTQLCHTVAVTCQLPPEQGGGGGKAMYIDT 156
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F + + D I ++ D ++ K + + S S
Sbjct: 157 EGTFRSERLVPIAERF-GLDPNEVMDNISYARAYNSDHQSQLLIKASAMMSESKYS---- 211
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
+++IDS AL+R+DF +L R K L +A F +AV++TNQVV +
Sbjct: 212 -VLIIDSATALYRTDFSG-RGELGARQLHLAKYLRSLVNLAETFRIAVIITNQVVSNV-- 267
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+G G+ G++ +PI G A+ +RL+L +
Sbjct: 268 -DGAVGMFAGDI------KKPIG---GNIMAHASTTRLYLRK 299
>gi|19074882|ref|NP_586388.1| DNA REPAIR PROTEIN RAD51 HOMOLOG [Encephalitozoon cuniculi GB-M1]
gi|19069607|emb|CAD25992.1| DNA REPAIR PROTEIN RAD51 HOMOLOG [Encephalitozoon cuniculi GB-M1]
Length = 334
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 19/222 (8%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GG SITE+ E +GKTQ C + ++ QLP GG ++Y+ T
Sbjct: 97 TTGSSEVDKLLSGGFESGSITEIFGEFRTGKTQLCHTVAVTCQLPPEQGGGGGKAMYIDT 156
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F + + D I ++ D ++ K + + S S
Sbjct: 157 EGTFRSERLVPIAERF-GLDPNEVMDNISYARAYNSDHQSQLLIKASAMMSESKYS---- 211
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
+++IDS AL+R+DF +L R K L +A F +AV++TNQVV +
Sbjct: 212 -VLIIDSATALYRTDFSG-RGELGARQLHLAKYLRSLVNLAETFRIAVIITNQVVSNV-- 267
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+G G+ G++ +PI G A+ +RL+L +
Sbjct: 268 -DGAVGMFTGDI------KKPIG---GNIMAHASTTRLYLRK 299
>gi|340502670|gb|EGR29337.1| hypothetical protein IMG5_158050 [Ichthyophthirius multifiliis]
Length = 479
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 106/223 (47%), Gaps = 22/223 (9%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
+ G +D+ LGGG+ SITE+ E +GKTQ C L ++ QLP S GG ++Y+ T
Sbjct: 243 STGSSELDKILGGGMETGSITEIFGEFRTGKTQICHTLCITCQLPKSKGGGEGKAMYIDT 302
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
E F RL Q++ F D C + + ++ DQ ++ + + + S S
Sbjct: 303 EGTFRPERLEQIAQRF--GLDPQECMENVAYARAYNCDQQNKLLIQAAALMAESKYS--- 357
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
L+++DS AL+R+DF +L R K ++ +A F +AV++TNQV+ ++
Sbjct: 358 --LLIVDSSTALYRTDFLGR-GELSVRQNHLGKFLRNIQRLADEFSIAVVITNQVMSQVD 414
Query: 200 PNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
G +G P G A+ +RL+L +
Sbjct: 415 -------------GSAMFAGDMKKPIGGNIMAHASTTRLYLRK 444
>gi|429329332|gb|AFZ81091.1| DNA repair protein rad51, putative [Babesia equi]
Length = 343
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 108/226 (47%), Gaps = 20/226 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G +D L GGI SITE++ E +GK+Q C L+++ QLP G L++
Sbjct: 104 KFTTGSVQLDVLLKGGIETGSITEIIGEFKTGKSQLCHTLSVTCQLPVEQSGGEGKCLWI 163
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ ++ F S + D I ++ D L+++ + + + S +R
Sbjct: 164 DTEGTFRPERVVSIAKRFGLSPS-DCLDNIAYAKAYNCDHQLELLVEATAMM---SQARF 219
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+RSD+ +L R K L+ +A FG+AV++TNQVV
Sbjct: 220 A--LLIVDSATALYRSDYSGR-GELSTRQMHLCKFLRALQRIADTFGVAVVITNQVVS-- 274
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
RV + + G P G A+ +RLFL +++
Sbjct: 275 ---------RVDAVASFF--GNDKIPIGGNIMAHASQTRLFLRQSK 309
>gi|430812161|emb|CCJ30383.1| unnamed protein product [Pneumocystis jirovecii]
Length = 347
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 7/181 (3%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 109 TTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLYIDT 168
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N D + ++ D L ++ + + + S S
Sbjct: 169 EGTFRPTRLLAVADRY-GLNGEEVLDNVAYARAYNADHQLQLLGQAANMMAESRFS---- 223
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+++DS +L+R+DF +L R K L+ +A +G+AV++TNQVV ++
Sbjct: 224 -LLIVDSATSLYRTDFAG-RGELSARQMHLAKFLRTLQRLADEYGIAVVITNQVVAQVDG 281
Query: 201 N 201
N
Sbjct: 282 N 282
>gi|118355624|ref|XP_001011071.1| DNA repair protein RAD51 containing protein [Tetrahymena
thermophila]
gi|3237383|gb|AAC39117.1| Rad51 [Tetrahymena thermophila]
gi|89292838|gb|EAR90826.1| DNA repair protein RAD51 containing protein [Tetrahymena
thermophila SB210]
Length = 331
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 33/257 (12%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ LGGG S+TE+ E +GKTQ C L ++ QLP GG ++Y+ T
Sbjct: 95 TTGSTELDKLLGGGFETGSLTEIFGEFRTGKTQICHTLCITCQLPKEKGGGEGKAMYIDT 154
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
E F RL ++ F D C + + + DQ ++ + + + S +
Sbjct: 155 EGTFRPERLESIAERF--GLDPQECMENVAYARAFNCDQQNKLLVQAAALMAESKYA--- 209
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
L+++DS AL+R+D+ +L R K L+ +A FG+AV++TNQV+ ++
Sbjct: 210 --LLIVDSATALYRTDYSGR-GELSVRQNHLGKFLRNLQRLADEFGIAVVITNQVMSQVD 266
Query: 200 PNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL--SRNEDFVVR-------- 249
G +G P G A+ +RL+L R E + +
Sbjct: 267 -------------GAAMFAGDMKKPIGGNIMAHASTTRLYLRKGRGESRICKIYDSPCLP 313
Query: 250 ENQMVNGGVGGSGSEDF 266
E++ + +G G EDF
Sbjct: 314 ESEAIY-AIGKGGIEDF 329
>gi|38571810|gb|AAH62849.1| RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae) [Danio rerio]
Length = 338
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 100 QISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKAMYI 159
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + + D + + D ++ + + + S +
Sbjct: 160 DTEGTFRPERLLAVAERYGLVGS-DVLDNVAYARAFNTDHQTQLLYQASAMMTESRYA-- 216
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 217 ---LLIVDSATALYRTDYSG-RGELSARQGHLGRFLRMLLRLADEFGVAVVITNQVVAQV 272
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G S P P G A+ +RL+L +
Sbjct: 273 D-------------GAAMFSADPKKPIGGNILAHASTTRLYLRK 303
>gi|307167464|gb|EFN61037.1| DNA repair protein RAD51-like protein 1 [Camponotus floridanus]
Length = 340
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ LGGGI SITE+ E SGK+Q C L ++ QLP GG LY+ T
Sbjct: 103 TTGSKELDKLLGGGIETGSITEIFGEFRSGKSQLCHTLAVNCQLPICMGGAEGRCLYIDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ ++ S + D + ++ D ++ + + + + +
Sbjct: 163 ENTFRPERLVAVAERYKISGS-SVLDNVAYARAYNTDHQTQLLVQASAMMTEARYA---- 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+D+ +L R + ML +A G+AV++TNQVV
Sbjct: 218 -LLIVDSATSLYRTDYSG-RGELNARQIHLARFLRMLLRLADEHGIAVVITNQVV 270
>gi|326427154|gb|EGD72724.1| DMC1 protein [Salpingoeca sp. ATCC 50818]
Length = 340
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 96/191 (50%), Gaps = 6/191 (3%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T N L+ + G +D LGGGI ITE+ E +GK+Q C+ L +SAQ+
Sbjct: 86 VTAANFLEARQQVFFISTGAKELDAILGGGIESQQITEIHGEYRTGKSQICMTLCISAQV 145
Query: 65 PSSHGGLSASS-LYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIM 123
P+ S +Y+ TE F RL + F + F ++ +S +QL +M
Sbjct: 146 PTDETNYSGGKVIYIDTEGAFRPERLEGICDRFNVDYQAALNNVYFCRAYNS-EQLATLM 204
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
+ + + + +RL++IDSI A FR+D+ +L +R + ++ +K +A
Sbjct: 205 ADVGAILAQEAG---IVRLLIIDSIMATFRTDYCGR-GELAERQQMLNQVLAAIKRLAEE 260
Query: 184 FGLAVLVTNQV 194
+ LAV++TNQ+
Sbjct: 261 WNLAVVLTNQM 271
>gi|302697701|ref|XP_003038529.1| hypothetical protein SCHCODRAFT_103780 [Schizophyllum commune H4-8]
gi|300112226|gb|EFJ03627.1| hypothetical protein SCHCODRAFT_103780, partial [Schizophyllum
commune H4-8]
Length = 339
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI +ITEL E +GK+Q C L ++ QLP S GG LY+ T
Sbjct: 100 TTGSKQLDALLGGGIETGAITELFGEFRTGKSQLCHTLAVTCQLPVSMGGGEGKCLYIDT 159
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F N D + ++ D ++ + + S SR
Sbjct: 160 EGTFRPVRLLAVAERF-GLNGEEVLDNVAYARAYNADHQNSLLTSASALM---SESRFC- 214
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF +L R K L+ +A FG+AV+VTNQV+
Sbjct: 215 -LLIVDSCTALYRTDFSG-RGELSSRQNHLGKFLRTLQRLADEFGIAVVVTNQVM 267
>gi|347800669|ref|NP_998371.2| DNA repair protein RAD51 homolog 1 [Danio rerio]
Length = 340
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 102 QISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKAMYI 161
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + + D + + D ++ + + + S +
Sbjct: 162 DTEGTFRPERLLAVAERYGLVGS-DVLDNVAYARAFNTDHQTQLLYQASAMMTESRYA-- 218
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 219 ---LLIVDSATALYRTDYSGR-GELSARQGHLGRFLRMLLRLADEFGVAVVITNQVVAQV 274
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G S P P G A+ +RL+L +
Sbjct: 275 D-------------GAAMFSADPKKPIGGNILAHASTTRLYLRK 305
>gi|320591998|gb|EFX04437.1| DNA repair protein rad51 [Grosmannia clavigera kw1407]
Length = 354
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 106 TTGSKNLDTLLGGGIETGSITEIFGEFRTGKSQLCHTLAVTCQLPFDCGGGEGKCLYIDT 165
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R+ ++ + S + D I + H+ D L ++ + + S
Sbjct: 166 EGTFRPSRVLAAANRYGLSGEE-VLDNIAIARAHNSDHQLALLRDAARMMAETRFS---- 220
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+VIDS AL+R+D+ +L R + L++M +G+AV++TNQVV
Sbjct: 221 -LLVIDSATALYRTDYMG-RGELNNRQMHLGQFLRQLQSMTDTYGIAVVITNQVV 273
>gi|154314604|ref|XP_001556626.1| hypothetical protein BC1G_04011 [Botryotinia fuckeliana B05.10]
gi|347831947|emb|CCD47644.1| similar to DNA repair protein RAD51 homolog 1 [Botryotinia
fuckeliana]
Length = 349
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GG+ S+TE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 105 TTGSKQLDTLLAGGVETGSVTEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 164
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ + S + D + ++ D L ++ + + + S
Sbjct: 165 EGTFRPVRLLAVANRYGLSGEE-VLDNVAYARAYNSDHQLQLLNQAAQMMCETRFS---- 219
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF +L R K ML+ +A FG+AV++TNQVV
Sbjct: 220 -LLIVDSATALYRTDFTG-RGELSSRQMHLAKFMRMLQRLADEFGIAVVITNQVV 272
>gi|21805949|gb|AAM76793.1| Dmc1 protein type A [Oryza sativa Indica Group]
Length = 344
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 126/297 (42%), Gaps = 52/297 (17%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T +LL + + T G +D+ LGGGI ITE E SGKTQ L +SAQL
Sbjct: 93 ITGSDLLIKRKSVVRITTGSQALDKLLGGGIETLCITEAFGEFRSGKTQLAHTLCVSAQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 153 PIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P RL+++DS+ ALFR DF +L KR ++ L +A
Sbjct: 213 LAAKM---------AEEPFRLLIVDSVIALFRVDFSGR-GELAKRQQKLAQMLSRLTKIA 262
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F +AV +TNQV+ +P G+ + +L PA G A+ RL L
Sbjct: 263 EEFNVAVYITNQVI--ADPG---GGMFITDLK---------KPAGGHVLAHAATIRLMLR 308
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
+ + E VC+ + AP+L + F++T G+
Sbjct: 309 KGK------------------GEQRVCK-------IFDAPNLPEGEAVFQVTSGGIM 340
>gi|392341149|ref|XP_003754266.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Rattus
norvegicus]
Length = 470
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 92/164 (56%), Gaps = 6/164 (3%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+PC S+TE+ G GKTQFC+ +++ A LP+ GGL + LY+ TE F
Sbjct: 90 LDEALHGGVPCGSLTEVTGPPGCGKTQFCIMMSVLATLPTRLGGLEGAVLYIDTESAFTA 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQS-VHSVDQLL--DIMPKIESFIKNSSNSRLPIRLI 143
RL +++ + P + + S VH +L ++ ++ES + + ++L+
Sbjct: 150 ERLVEIAESRFPQYFNTEEKLLLTSSRVHLCQELTCEGLLQRLESLEEEIISKG--VKLV 207
Query: 144 VIDSIAALFRSDFDNTMD-DLKKRSFLFFKISGMLKAMAVGFGL 186
++DSIA++ R +FD + ++K+R+ K + +LK ++ F +
Sbjct: 208 IVDSIASVVRKEFDPQLQGNIKERNKFLGKGASLLKYLSGEFSV 251
>gi|401828066|ref|XP_003888325.1| DNA repair protein Rad51 [Encephalitozoon hellem ATCC 50504]
gi|392999597|gb|AFM99344.1| DNA repair protein Rad51 [Encephalitozoon hellem ATCC 50504]
gi|396082442|gb|AFN84051.1| DNA repair protein Rad51 [Encephalitozoon romaleae SJ-2008]
Length = 334
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 19/222 (8%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GG SITE+ E +GKTQ C + ++ QLP GG ++Y+ T
Sbjct: 97 TTGSSEVDKLLNGGFESGSITEIFGEFRTGKTQLCHTVAVTCQLPPEQGGGGGKAMYIDT 156
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F + + D I ++ D ++ K + + S S
Sbjct: 157 EGTFRSERLVPIAERF-GLDPNEVMDNISYARAYNSDHQSQLLIKASAMMSESKYS---- 211
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
+++IDS AL+R+DF +L R K L +A F +AV++TNQVV +
Sbjct: 212 -VLIIDSATALYRTDFSG-RGELGARQLHLAKYLRSLVNLAETFRVAVIITNQVVSNV-- 267
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+G G+ G++ +PI G A+ +RL+L +
Sbjct: 268 -DGAVGMFAGDI------KKPIG---GNIMAHASTTRLYLRK 299
>gi|156053229|ref|XP_001592541.1| DNA repair protein rhp51 [Sclerotinia sclerotiorum 1980]
gi|154704560|gb|EDO04299.1| DNA repair protein rhp51 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 349
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GG+ S+TE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 105 TTGSKQLDTLLAGGVETGSVTEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 164
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ + S + D + ++ D L ++ + + + S
Sbjct: 165 EGTFRPVRLLAVANRYGLSGEE-VLDNVAYARAYNSDHQLQLLNQAAQMMCETRFS---- 219
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF +L R K ML+ +A FG+AV++TNQVV
Sbjct: 220 -LLIVDSATALYRTDFTG-RGELSSRQMHLAKFMRMLQRLADEFGIAVVITNQVV 272
>gi|442535544|gb|AGC52845.1| Rad51, partial [Hypsibius dujardini]
Length = 377
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 7/174 (4%)
Query: 22 VGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTE 81
G +D+ L GGI SITE+ E SGKTQ C L ++ QLP GG LY+ TE
Sbjct: 134 TGSKELDKLLQGGIETGSITEMFGEFRSGKTQLCHTLAVTCQLPIDMGGGEGKCLYIDTE 193
Query: 82 FPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIR 141
F RL ++ + N ++ D + ++ D + ++ + + + S +
Sbjct: 194 GTFRPERLLSIAERY-GLNGNDVLDNVAYARAYNTDHQMQLLVQAAAMMVESRFA----- 247
Query: 142 LIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+D+ +L R + L +A FG+AVL+TNQVV
Sbjct: 248 LLIVDSATALYRTDYSGR-GELCARQMHLARFLRFLMRLADEFGVAVLITNQVV 300
>gi|255086169|ref|XP_002509051.1| DMC1 DNA recombinase [Micromonas sp. RCC299]
gi|226524329|gb|ACO70309.1| DMC1 DNA recombinase [Micromonas sp. RCC299]
Length = 359
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 90/196 (45%), Gaps = 13/196 (6%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G+ +T + + T G ID LGGG+P SITE+ E GKTQ C L ++
Sbjct: 104 GSFVTAKEWMSMRKDTINIRTGADTIDAILGGGVPTRSITEMYGEWRCGKTQICHTLAVT 163
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHS---VDQ 118
QLP GG A ++ TE F R+ Q++ F +D D I V + +D
Sbjct: 164 TQLPLDEGGGCAKVAFIDTEGTFRAERIVQIAERFNLDSDA-VLDNILVARTFTHEMMDN 222
Query: 119 LLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLK 178
L ++ S P ++++IDSI A FR DF +L +R + L
Sbjct: 223 ALTLLA--------GKFSEEPFKILIIDSIMAHFRVDFIGR-GELSERQQRLGQFLAKLN 273
Query: 179 AMAVGFGLAVLVTNQV 194
+A F +AV+ TNQV
Sbjct: 274 KIADEFNIAVVYTNQV 289
>gi|432947216|ref|XP_004083949.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Oryzias
latipes]
Length = 340
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 102 QISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKAMYI 161
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + + D + + D ++ + + + S +
Sbjct: 162 DTEGTFRPERLLAVAERYGLVGS-DVLDNVAYARAFNTDHQTQLLYQASAMMAESRYA-- 218
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 219 ---LLIVDSATALYRTDYSGR-GELSARQGHLGRFLRMLLRLADEFGVAVVITNQVVAQV 274
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G S P P G A+ +RL+L +
Sbjct: 275 D-------------GAAMFSADPKKPIGGNILAHASTTRLYLRK 305
>gi|402471502|gb|EJW05219.1| DNA repair protein RAD51 [Edhazardia aedis USNM 41457]
Length = 333
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 19/222 (8%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GGI C SITE+ E +GK+Q C L ++ QL GG + L++ T
Sbjct: 96 TTGSSELDKLLNGGIECGSITEIFGEFRTGKSQLCHTLAVTCQLGFETGGGNGKCLFIDT 155
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D ++ + + + S S
Sbjct: 156 EGTFRTERLVSIAQRY-SLDPQTVLDNVAYARAYNSDHQSRLLIQAAAMMSESHYS---- 210
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+++DS AL+R+DF +L R + ML +A FG+AV++TNQVV
Sbjct: 211 -LMIVDSAMALYRTDFSG-RGELGARQIHLARFLRMLLRLADEFGIAVVITNQVV----- 263
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+V L+++ P P G A+ +RL+L +
Sbjct: 264 ------AQVDGATSLFAAD-PKKPVGGNIMAHASTTRLYLRK 298
>gi|213515370|ref|NP_001134027.1| DNA repair protein RAD51 homolog A [Salmo salar]
gi|209156210|gb|ACI34337.1| DNA repair protein RAD51 homolog A [Salmo salar]
Length = 338
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 100 QISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKAMYI 159
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + + D + + D ++ + + + S +
Sbjct: 160 DTEGTFRPERLLAVAERYGLVGS-DVLDNVAYARAFNTDHQTQLLYQASAMMAESRYA-- 216
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 217 ---LLIVDSATALYRTDYSGR-GELAARQGHLGRFLRMLLRLADEFGVAVVITNQVVAQV 272
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRN 243
+ G S P P G A+ +RL+L +
Sbjct: 273 D-------------GAAMFSADPKKPIGGNIMAHASTTRLYLRKG 304
>gi|126723348|ref|NP_001075493.1| DNA repair protein RAD51 homolog 1 [Oryctolagus cuniculus]
gi|6225914|sp|O77507.1|RAD51_RABIT RecName: Full=DNA repair protein RAD51 homolog 1
gi|3387769|gb|AAC28561.1| Rad51 [Oryctolagus cuniculus]
Length = 339
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+ V++TNQVV +
Sbjct: 218 ---LLIVDSATALYRTDYSG-RGELSARQMHLARFLRMLLRLADEFGVTVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 274 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 304
>gi|389632217|ref|XP_003713761.1| DNA repair protein rhp51 [Magnaporthe oryzae 70-15]
gi|312283561|dbj|BAJ34646.1| DNA recombinational repair protein [Magnaporthe oryzae]
gi|351646094|gb|EHA53954.1| DNA repair protein rhp51 [Magnaporthe oryzae 70-15]
gi|440473931|gb|ELQ42700.1| hypothetical protein OOU_Y34scaffold00194g12 [Magnaporthe oryzae
Y34]
gi|440489122|gb|ELQ68800.1| hypothetical protein OOW_P131scaffold00217g12 [Magnaporthe oryzae
P131]
Length = 353
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 89/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI S+TEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 107 TTGSKNLDTMLGGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 166
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ F S + D + ++ D L ++ + + + + S
Sbjct: 167 EGTFRPVRLLAVANRFGLSGEE-VLDNVAYARAYNSDHQLQLLNQASAMMCETRFS---- 221
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF +L R K L+ +A FG+AV+++NQVV
Sbjct: 222 -LLIVDSATALYRTDFLG-RGELSSRQTHLAKFMRQLQRLADEFGIAVVISNQVV 274
>gi|222154111|gb|ACM47235.1| disrupted meiotic cDNA 1 protein [Triticum aestivum]
Length = 344
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 126/300 (42%), Gaps = 52/300 (17%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT +LL + + T G +D LGGGI ITE E SGKTQ L +S QL
Sbjct: 93 MTGSDLLIKRKSVVRITTGSQALDELLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 153 PLHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P RL+++DS+ ALFR DF +L +R ++ L +A
Sbjct: 213 LAAKM---------AEEPFRLLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIA 262
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F +AV +TNQV+ +P G+ + + P PA G A+ RL L
Sbjct: 263 EEFNVAVYITNQVI--ADPG---GGMFITD---------PKKPAGGHVLAHAATIRLMLR 308
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+ S E VC+ + AP+L + F+IT G+ V+
Sbjct: 309 K------------------SKGEQRVCK-------IFDAPNLPEGEAVFQITTGGLMDVK 343
>gi|348537158|ref|XP_003456062.1| PREDICTED: DNA repair protein RAD51 homolog B [Oreochromis
niloticus]
gi|63852088|dbj|BAD98461.1| RecA homolog Rad51 [Oreochromis niloticus]
Length = 336
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 98 QISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKAMYI 157
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + + D + + D ++ + + + S +
Sbjct: 158 DTEGTFRPERLLAVAERYGLVGS-DVLDNVAYARAFNTDHQTQLLYQASAMMAESRYA-- 214
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 215 ---LLIVDSATALYRTDYSGR-GELSARQGHLGRFLRMLLRLADEFGVAVVITNQVVAQV 270
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G S P P G A+ +RL+L +
Sbjct: 271 D-------------GAAMFSADPKKPIGGNILAHASTTRLYLRK 301
>gi|410927852|ref|XP_003977354.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Takifugu
rubripes]
Length = 340
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 102 QISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKAMYI 161
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + + D + + D ++ + + + S +
Sbjct: 162 DTEGTFRPERLLAVAERYGLVGS-DVLDNVAYARAFNTDHQTQLLYQASAMMAESRYA-- 218
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 219 ---LLIVDSATALYRTDYSG-RGELSARQGHLGRFLRMLLRLADEFGVAVVITNQVVAQV 274
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G S P P G A+ +RL+L +
Sbjct: 275 D-------------GAAMFSADPKKPIGGNILAHASTTRLYLRK 305
>gi|88604173|ref|YP_504351.1| DNA repair and recombination protein RadA [Methanospirillum
hungatei JF-1]
gi|88189635|gb|ABD42632.1| DNA repair and recombination protein RadA [Methanospirillum
hungatei JF-1]
Length = 407
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G T ++ + L +K P +D LGGG +ITE+ E GSGK+Q Q+ +
Sbjct: 148 IGGFKTGTDVFEQRLKVKKLRTLVPEVDELLGGGFETQAITEMYGEFGSGKSQIVHQMAV 207
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDY---IFVQSVHSVD 117
+ QLP GGL+ S +Y+ TE F R+ Q+ +P ++ I V + D
Sbjct: 208 NVQLPEELGGLNGSVIYVDTENTFRPERIEQMVKGLEIEG-ADPQEFLKNIHVARAQTSD 266
Query: 118 QLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDF------DNTMDDLKKRSFLFF 171
+ ++ + + P++L+++DS+ LFRS++ L + F
Sbjct: 267 HQMLLIETSRELAEELKAAGKPVKLVIVDSLTGLFRSEYAGRGTLAERQQKLNRHMHDIF 326
Query: 172 KISGMLKAMAVGFGLAVLVTNQV 194
K+ A+ LVTNQV
Sbjct: 327 KLCDEYNAIG-------LVTNQV 342
>gi|55379507|ref|YP_137357.1| DNA repair and recombination protein RadA [Haloarcula marismortui
ATCC 43049]
gi|55232232|gb|AAV47651.1| DNA repair and recombination protein RadA [Haloarcula marismortui
ATCC 43049]
Length = 351
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 31/206 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K + G +D LGGG+ SITE+ E G+GK+Q QL ++ QLP+ HGGL S++++
Sbjct: 84 KLSWGVDEVDDLLGGGVETQSITEVYGEFGAGKSQVTHQLAVNVQLPAEHGGLEGSAIFV 143
Query: 79 HTEFPFPMRRLHQ---------------LSHTFRPSNDHNPCDYIF--------VQSVH- 114
+E F R+ Q L D +P D ++ +H
Sbjct: 144 DSEDTFRPERIEQMVKGLADEVLADTMVLHGIVEEEADADPTDEALLDDLVASVLEKIHV 203
Query: 115 -----SVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFL 169
S Q+L + K + S P+RL+ +DS+ A FR+++ + ++ L
Sbjct: 204 AKAFNSNHQIL-LAEKAQEIASESQEEEFPVRLLAVDSLTAHFRAEYVGRGELADRQQKL 262
Query: 170 FFKISGMLKAMAVGFGLAVLVTNQVV 195
+ +++ + AV+VTNQV
Sbjct: 263 NKHLHDLMRVGDLN-NTAVVVTNQVA 287
>gi|448648823|ref|ZP_21679888.1| DNA repair and recombination protein RadA [Haloarcula californiae
ATCC 33799]
gi|445774567|gb|EMA25583.1| DNA repair and recombination protein RadA [Haloarcula californiae
ATCC 33799]
Length = 349
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 31/206 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K + G +D LGGG+ SITE+ E G+GK+Q QL ++ QLP+ HGGL S++++
Sbjct: 82 KLSWGVDEVDDLLGGGVETQSITEVYGEFGAGKSQVTHQLAVNVQLPAEHGGLEGSAIFV 141
Query: 79 HTEFPFPMRRLHQ---------------LSHTFRPSNDHNPCDYIF--------VQSVH- 114
+E F R+ Q L D +P D ++ +H
Sbjct: 142 DSEDTFRPERIEQMVKGLADEVLADTMVLHGIVEEEADADPTDEALLDDLVASVLEKIHV 201
Query: 115 -----SVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFL 169
S Q+L + K + S P+RL+ +DS+ A FR+++ + ++ L
Sbjct: 202 AKAFNSNHQIL-LAEKAQEIASESQEEEFPVRLLAVDSLTAHFRAEYVGRGELADRQQKL 260
Query: 170 FFKISGMLKAMAVGFGLAVLVTNQVV 195
+ +++ + AV+VTNQV
Sbjct: 261 NKHLHDLMRVGDLN-NTAVVVTNQVA 285
>gi|154151638|ref|YP_001405256.1| DNA repair and recombination protein RadA [Methanoregula boonei
6A8]
gi|154000190|gb|ABS56613.1| DNA repair and recombination protein RadA [Methanoregula boonei
6A8]
Length = 325
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 11/224 (4%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G+ T +++ + K + P +D +GGG+ +ITE+ E GSGK+Q Q+ +
Sbjct: 65 IGSFRTGKDIFEQRKEIRKLSFRVPELDALMGGGLETQAITEMYGEFGSGKSQVVHQMAV 124
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPS---NDHNPCDYIFVQSVHSVD 117
+ QLP GG++ S +Y+ TE F R+ Q+ + D I + H+ D
Sbjct: 125 NVQLPEEQGGMNGSVIYIDTENTFRPERIEQMVAGLGIDDIPDTQEFLDNIHIARAHTSD 184
Query: 118 QLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDN------TMDDLKKRSFLFF 171
+ ++ S P++L +IDS+ A FRS++ L + F
Sbjct: 185 HQMLLVENSRDLANELKGSEKPVKLFIIDSLTAHFRSEYAGRGTLAARQQKLNRHMHELF 244
Query: 172 KISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCL 215
K+ + + AVG +++N V +P + + G VG+
Sbjct: 245 KL--IDEHNAVGLVTNQVMSNPAVFFGDPTKPIGGNIVGHTATF 286
>gi|54696278|gb|AAV38511.1| RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae) [Homo
sapiens]
Length = 339
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 20/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP G ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGEGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 161 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARAFNTDHQTQLLYQASAMMVESRYA-- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV +
Sbjct: 218 ---LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQV 273
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ G + P P G A+ +RL+L +
Sbjct: 274 D-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 304
>gi|448683172|ref|ZP_21692146.1| DNA repair and recombination protein RadA [Haloarcula japonica DSM
6131]
gi|445784157|gb|EMA34975.1| DNA repair and recombination protein RadA [Haloarcula japonica DSM
6131]
Length = 349
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 29/205 (14%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K + G +D LGGG+ SITE+ E G+GK+Q QL+++ QLP+ HGGL S++++
Sbjct: 82 KLSWGVDEVDDLLGGGVETQSITEVYGEFGAGKSQVTHQLSVNVQLPAEHGGLEGSAIFV 141
Query: 79 HTEFPFPMRRLHQ---------------LSHTFRPSNDHNPCD-------------YIFV 110
+E F R+ Q L D +P D I V
Sbjct: 142 DSEDTFRPERIEQMVKGLTDEVLADTMVLHGIVEEEADADPTDEDLLDDLVASVLEKIHV 201
Query: 111 QSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLF 170
+ + + + K + S P+RL+ +DS+ A FR+++ + ++ L
Sbjct: 202 AKAFNSNHQILLAEKAQEIASESQEEEFPVRLLAVDSLTAHFRAEYVGRGELADRQQKLN 261
Query: 171 FKISGMLKAMAVGFGLAVLVTNQVV 195
+ +++ + AV+VTNQV
Sbjct: 262 KHLHDLMRVGDLN-NTAVVVTNQVA 285
>gi|154305506|ref|XP_001553155.1| hypothetical protein BC1G_08522 [Botryotinia fuckeliana B05.10]
Length = 357
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 106/233 (45%), Gaps = 23/233 (9%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D CL GG SI+E+ E GKTQ L + AQLP GG Y+
Sbjct: 119 RISTGSKQLDACLNGGFQTMSISEVYGEFRCGKTQLAHTLAVIAQLPKEMGGAEGKVAYI 178
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ +++ F D + ++ ++ H+ +Q L +E +N +
Sbjct: 179 DTEGTFRPERISEIAERFGVDPDQALENIVYARA-HNTEQEL-----LEGLAQNFATDEY 232
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
RL++IDSI AL+RSDF +L +R MA F L V +TNQV+
Sbjct: 233 --RLLIIDSIMALYRSDFIG-RGELSERQGALNAFLRKATQMAEEFNLVVFMTNQVMS-- 287
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL--SRNEDFVVR 249
+ G + L G + GR PA G A+ +R+ L R E+ V +
Sbjct: 288 --DPGASALFAG------ADGRK--PAGGHILAHASTTRVLLRKGRGEERVAK 330
>gi|225559662|gb|EEH07944.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
gi|325089671|gb|EGC42981.1| uvsC [Ajellomyces capsulatus H88]
Length = 348
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 104 TTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + D D I ++ D L ++ + + + S
Sbjct: 164 EGTFRPTRLLAVAQRYGLVGDE-VLDNIAYARAYNSDHQLQLLNQASQMMCETRFS---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 219 -LLIVDSATALYRTDFSG-RGELSSRQNHLAKFMRKLRTLADEFGIAVVITNQVV 271
>gi|448679793|ref|ZP_21690338.1| DNA repair and recombination protein RadA [Haloarcula argentinensis
DSM 12282]
gi|445769952|gb|EMA21021.1| DNA repair and recombination protein RadA [Haloarcula argentinensis
DSM 12282]
Length = 351
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 29/205 (14%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K + G +D LGGG+ SITE+ E G+GK+Q QL+++ QLP+ HGGL S++++
Sbjct: 84 KLSWGVDEVDDLLGGGVETQSITEVYGEFGAGKSQVTHQLSVNVQLPAEHGGLEGSAIFV 143
Query: 79 HTEFPFPMRRLHQ---------------LSHTFRPSNDHNPCD-------------YIFV 110
+E F R+ Q L D +P D I V
Sbjct: 144 DSEDTFRPERIEQMVKGLDDEVLADTMVLHGIVEEEADADPTDEDLLDDLVASVLEKIHV 203
Query: 111 QSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLF 170
+ + + + K + S P+RL+ +DS+ A FR+++ + ++ L
Sbjct: 204 AKAFNSNHQILLAEKAQEIASESQEEEFPVRLLAVDSLTAHFRAEYVGRGELADRQQKLN 263
Query: 171 FKISGMLKAMAVGFGLAVLVTNQVV 195
+ +++ + AV+VTNQV
Sbjct: 264 KHLHDLMRVGDLN-NTAVVVTNQVA 287
>gi|145239409|ref|XP_001392351.1| DNA repair protein rhp51 [Aspergillus niger CBS 513.88]
gi|134076861|emb|CAK48229.1| unnamed protein product [Aspergillus niger]
Length = 347
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 103 TTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D L ++ + + + S
Sbjct: 163 EGTFRPVRLLAVAQRYGLVGEE-VLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS +L+R+DF N +L R K L+ +A FG+AV++TNQVV
Sbjct: 218 -LLVVDSATSLYRTDF-NGRGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVV 270
>gi|4322494|gb|AAD16063.1| recombination/repair protein RadA [Cenarchaeum symbiosum]
Length = 369
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 17/179 (9%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI +ITE+ E GSGKTQFC + ++ Q P GGL +Y+ T
Sbjct: 61 TTGTDALDALLGGGIETQAITEVFGEFGSGKTQFCHTMCVTTQKPKEEGGLGGGVMYIDT 120
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPC---DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSR 137
E F R+ T +N+ +P D I V ++ + I+ + I+ +
Sbjct: 121 EGTFRPERV----VTIAKANNMDPAKLLDGIIVARAYNSSHQVLILEEAGKTIQEEN--- 173
Query: 138 LPIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I+LI+ DS LFRS++ T+ +++ + + +L +A + AVL TNQV
Sbjct: 174 --IKLIISDSTTGLFRSEYLGRGTLASRQQKLGRYIR---LLARIAETYNCAVLATNQV 227
>gi|425783624|gb|EKV21464.1| DNA repair protein RAD51, putative [Penicillium digitatum Pd1]
Length = 344
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 100 TTGSKRLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 159
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D L ++ + + + S
Sbjct: 160 EGTFRPVRLLAVAQRYGLVGEE-VLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 214
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS +L+R+DF N +L R K L+ +A FG+AV++TNQVV
Sbjct: 215 -LLVVDSATSLYRTDF-NGRGELASRQTHLAKFMRTLQRLADEFGIAVVITNQVV 267
>gi|358372925|dbj|GAA89526.1| DNA repair protein RAD51 [Aspergillus kawachii IFO 4308]
Length = 347
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 103 TTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D L ++ + + + S
Sbjct: 163 EGTFRPVRLLAVAQRYGLVGEE-VLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS +L+R+DF N +L R K L+ +A FG+AV++TNQVV
Sbjct: 218 -LLVVDSATSLYRTDF-NGRGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVV 270
>gi|68485285|ref|XP_713476.1| hypothetical protein CaO19.11236 [Candida albicans SC5314]
gi|68485358|ref|XP_713440.1| hypothetical protein CaO19.3752 [Candida albicans SC5314]
gi|46434928|gb|EAK94324.1| hypothetical protein CaO19.3752 [Candida albicans SC5314]
gi|46434968|gb|EAK94361.1| hypothetical protein CaO19.11236 [Candida albicans SC5314]
gi|238879694|gb|EEQ43332.1| DNA repair protein RAD51 [Candida albicans WO-1]
Length = 361
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGG+ SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 120 TTGSKQLDTLLGGGVETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLYIDT 179
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N ++ D + ++ + L+++ + S S
Sbjct: 180 EGTFRPNRLVSIAQRY-GLNPNDCLDNVAYARAYNAEHQLNLLNIAAEMMAESRFS---- 234
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DSI +L+R+D+ +L R K L+ +A FG+AV++TNQVV
Sbjct: 235 -LLIVDSIMSLYRTDYAG-RGELSARQTHVAKFMRTLQRLADEFGIAVVITNQVV 287
>gi|448638833|ref|ZP_21676503.1| DNA repair and recombination protein RadA [Haloarcula sinaiiensis
ATCC 33800]
gi|445763165|gb|EMA14368.1| DNA repair and recombination protein RadA [Haloarcula sinaiiensis
ATCC 33800]
Length = 349
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 31/206 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K + G +D LGGG+ SITE+ E G+GK+Q QL ++ QLP+ HGGL S++++
Sbjct: 82 KLSWGVDEVDDLLGGGVETQSITEVYGEFGAGKSQVTHQLAVNVQLPAEHGGLEGSAIFV 141
Query: 79 HTEFPFPMRRLHQ---------------LSHTFRPSNDHNPCDYIFV------------- 110
+E F R+ Q L D +P D +
Sbjct: 142 DSEDTFRPERIEQMVKGLADEVLADTMVLHGIVEEEADADPTDEALLDDLVASVLERIHV 201
Query: 111 -QSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFL 169
++ +S Q+L + K + S P+RL+ +DS+ A FR+++ + ++ L
Sbjct: 202 AKAFNSNHQIL-LAEKAQEIASESQEEEFPVRLLAVDSLTAHFRAEYVGRGELADRQQKL 260
Query: 170 FFKISGMLKAMAVGFGLAVLVTNQVV 195
+ +++ + AV+VTNQV
Sbjct: 261 NKHLHDLMRVGDLN-NTAVVVTNQVA 285
>gi|401882304|gb|EJT46566.1| hypothetical protein A1Q1_04861 [Trichosporon asahii var. asahii
CBS 2479]
Length = 471
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 131/329 (39%), Gaps = 84/329 (25%)
Query: 47 SGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTF--RPSNDHNP 104
S +GK+ L L LSAQLP+ S L L +E P RL ++ R + NP
Sbjct: 82 SAAGKSHLTLSLALSAQLPALSTS-PGSVLVLTSERPLATTRLMEMGEAMLARHPDPANP 140
Query: 105 C-----DYIFVQSVHSVDQLL-------------------------DIMPKIESFIKNSS 134
D + V D L DI PK E + S+
Sbjct: 141 TLDEMLDNVETSPVADADSLEHCLSFFLPPLLASRRTTEGSALLGEDIKPK-EDIPEASA 199
Query: 135 -----------NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
++ P+RL+++DS+AAL RS+ + L +RS +S LKA+A+
Sbjct: 200 IDGVNGASTRKKAKPPVRLLILDSLAALLRSETSLSGGGLVQRSRRLCSLSDRLKALALE 259
Query: 184 FGLAVLVTNQVVDLM---EPNEGVNGLRVGNLGCL--YSSGRPICPALGIAWANCVNSRL 238
+ LA++V NQV D+ +P G L S+G ALGI WANCVN+R+
Sbjct: 260 YHLAIVVVNQVSDVFIGEQPKAGPEMLYAAQARHFNGQSAGGRKEAALGIVWANCVNTRI 319
Query: 239 FLSRNEDFVV-----------------------------RENQMVNGGVGGS-GSEDFVC 268
L+R V RE Q GVG G E +
Sbjct: 320 MLARTGRRKVITLSDLFPDAQDSRKRKRVDTPAEPQQQGRERQHEAEGVGVQLGEEPSLI 379
Query: 269 RRTRRSLHVVFAPHLADTSCEFEITREGV 297
RR +H VF+ + S +F + + GV
Sbjct: 380 RR----IHQVFSAYGPPGSADFILAKSGV 404
>gi|452825485|gb|EME32481.1| DNA repair protein isoform 2 [Galdieria sulphuraria]
Length = 312
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 117/278 (42%), Gaps = 44/278 (15%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI +SITE+ E SGKTQ L ++AQLP S G Y+ T
Sbjct: 75 TTGSSALDELLGGGIETSSITEVFGEFRSGKTQLAHTLCVTAQLPKSVNGAEGRVAYIDT 134
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R+ +++ F + D I V ++ + ++++ I + + +
Sbjct: 135 ENCFRPERIVEIAERFEL-DPEEVLDNILVARAYTSEHQIELLVHIAAKMVEET-----F 188
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+++DS ALFR D+ +L +R + L ++ F LAV +TNQV M
Sbjct: 189 GLLIVDSATALFRVDYSGR-GELSERQQKLNRFMSQLLKLSEQFNLAVFITNQV---MST 244
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGG 260
+G G+ V + P P G A+ +R+ L +
Sbjct: 245 PDGSAGMFVVD---------PKKPVGGHVIAHASTTRIMLRKG----------------- 278
Query: 261 SGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
R +R + +P LA+ FE++ GV
Sbjct: 279 --------RGEQRVAKIYDSPMLAENEATFEVSSGGVI 308
>gi|429965461|gb|ELA47458.1| DNA repair protein RAD51 [Vavraia culicis 'floridensis']
Length = 343
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 19/222 (8%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GGI SITE+ E +GKTQ C L ++ QL GG S +LY+ T
Sbjct: 106 TTGSQELDKLLKGGIETGSITEIFGEFRTGKTQLCHTLAVTCQLDRESGGGSGKALYIDT 165
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R ++ F D + + ++ +S D ++ + + + S+ S
Sbjct: 166 EGTFRPERCIAVAQRFGLDPDQVLENISYARAYNS-DHQSQLLVQAAAMLSESNYS---- 220
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
LI++DS AL+R+DF +L R + ML +A F +AV++TNQVV
Sbjct: 221 -LIIVDSAMALYRTDFSG-RGELGARQIHLARFLRMLLRLADEFSVAVVITNQVV----- 273
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
V ++++ P P G A+ +RL+L +
Sbjct: 274 ------ASVDGAAAMFNAD-PKKPVGGHIMAHASTTRLYLRK 308
>gi|357160971|ref|XP_003578935.1| PREDICTED: meiotic recombination protein DMC1 homolog [Brachypodium
distachyon]
Length = 345
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 126/300 (42%), Gaps = 52/300 (17%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT +LL + + T G +D LGGGI ITE E SGKTQ L +S QL
Sbjct: 94 MTGSDLLIKRKSVVRITTGSQALDELLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQL 153
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 154 PLHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 213
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P RL+++DS+ ALFR DF +L +R ++ L +A
Sbjct: 214 LAAKM---------AEEPFRLLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIA 263
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F +AV +TNQV+ +P G+ + + P PA G A+ RL L
Sbjct: 264 EEFNVAVYITNQVI--ADPG---GGMFITD---------PKKPAGGHVLAHAATIRLMLR 309
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+ + E VC+ + AP+L + F+IT G+ V+
Sbjct: 310 KGK------------------GEQRVCK-------IFDAPNLPEGEAVFQITTGGLMDVK 344
>gi|241958150|ref|XP_002421794.1| DNA repair protein rad51 homologue, putative [Candida dubliniensis
CD36]
gi|223645139|emb|CAX39736.1| DNA repair protein rad51 homologue, putative [Candida dubliniensis
CD36]
Length = 361
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 120 TTGSKQLDTLLGGGIETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLYIDT 179
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N ++ D + ++ + L+++ + S S
Sbjct: 180 EGTFRPNRLVSIAQRY-GLNPNDCLDNVAYARAYNAEHQLNLLNIASQMMAESRFS---- 234
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DSI +L+R+D+ +L R + L+ +A FG+AV++TNQVV
Sbjct: 235 -LLIVDSIMSLYRTDYAG-RGELSARQTHVARFMRTLQRLADEFGIAVIITNQVV 287
>gi|121701915|ref|XP_001269222.1| DNA repair protein RAD51, putative [Aspergillus clavatus NRRL 1]
gi|119397365|gb|EAW07796.1| DNA repair protein RAD51, putative [Aspergillus clavatus NRRL 1]
Length = 347
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 103 TTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D L ++ + + + S
Sbjct: 163 EGTFRPVRLLAVAQRYGLVGEE-VLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS +L+R+DF N +L R K L+ +A FG+AV++TNQVV
Sbjct: 218 -LLVVDSATSLYRTDF-NGRGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVV 270
>gi|197092367|gb|ACH42256.1| disrupted meiotic cDNA 1 protein [Triticum aestivum]
gi|222154115|gb|ACM47237.1| disrupted meiotic cDNA 1 protein [Triticum aestivum]
Length = 344
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 126/300 (42%), Gaps = 52/300 (17%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT +LL + + T G +D LGGGI ITE E SGKTQ L +S QL
Sbjct: 93 MTGSDLLIKRKSVVRITTGSQTLDELLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 153 PLHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P RL+++DS+ ALFR DF +L +R ++ L +A
Sbjct: 213 LAAKM---------AEEPFRLLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIA 262
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F +AV +TNQV+ +P G+ + + P PA G A+ RL L
Sbjct: 263 EEFNVAVYITNQVI--ADPG---GGMFITD---------PKKPAGGHVLAHAATIRLMLR 308
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+ + E VC+ + AP+L + F+IT G+ V+
Sbjct: 309 KGK------------------GEQRVCK-------IFDAPNLPEGEAVFQITTGGLMDVK 343
>gi|429852332|gb|ELA27473.1| DNA repair protein rad51 [Colletotrichum gloeosporioides Nara gc5]
Length = 350
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI S+TEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 106 TTGSKQLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 165
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ F S + D + ++ D L ++ + + + + S
Sbjct: 166 EGTFRPVRLLAVANRFGLSGEE-VLDNVAYARAYNSDHQLQLLQQASAMMCETRFS---- 220
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 221 -LLIVDSATALYRTDFLG-RGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVV 273
>gi|118575453|ref|YP_875196.1| RecA/RadA recombinase [Cenarchaeum symbiosum A]
gi|145559520|sp|O93748.2|RADA_CENSY RecName: Full=DNA repair and recombination protein RadA
gi|118193974|gb|ABK76892.1| RecA/RadA recombinase [Cenarchaeum symbiosum A]
Length = 398
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 17/179 (9%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI +ITE+ E GSGKTQFC + ++ Q P GGL +Y+ T
Sbjct: 90 TTGTDALDALLGGGIETQAITEVFGEFGSGKTQFCHTMCVTTQKPKEEGGLGGGVMYIDT 149
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPC---DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSR 137
E F R+ T +N+ +P D I V ++ + I+ + I+ +
Sbjct: 150 EGTFRPERV----VTIAKANNMDPAKLLDGIIVARAYNSSHQVLILEEAGKTIQEEN--- 202
Query: 138 LPIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I+LI+ DS LFRS++ T+ +++ + + +L +A + AVL TNQV
Sbjct: 203 --IKLIISDSTTGLFRSEYLGRGTLASRQQKLGRYIR---LLARIAETYNCAVLATNQV 256
>gi|119495909|ref|XP_001264730.1| DNA repair protein RAD51, putative [Neosartorya fischeri NRRL 181]
gi|119412892|gb|EAW22833.1| DNA repair protein RAD51, putative [Neosartorya fischeri NRRL 181]
Length = 348
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 104 TTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D L ++ + + + S
Sbjct: 164 EGTFRPVRLLAVAQRYGLVGEE-VLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS +L+R+DF N +L R K L+ +A FG+AV++TNQVV
Sbjct: 219 -LLVVDSATSLYRTDF-NGRGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVV 271
>gi|340056261|emb|CCC50591.1| putative RAD51/dmc1 protein [Trypanosoma vivax Y486]
Length = 352
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 123/279 (44%), Gaps = 45/279 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ LGGG+ SITE E +GKTQ L ++ QLP S GG + ++Y+
Sbjct: 114 RMTTGSAALDQLLGGGVESMSITEAFGEFRTGKTQIAHTLCVTCQLPLSMGGGNGKAVYV 173
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ ++ F D + I V ++ + + ++ + + + S
Sbjct: 174 DTESTFRPERIKPIAERFGLDVDAVLAN-IIVARAYTHEHQMHLLSMVAAKMAEEQFS-- 230
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+V+DSI ALFR DF + +++ L +S ++K +A + +AV +TNQVV
Sbjct: 231 ---LLVVDSITALFRVDFSGRGELAERQQKLAKMLSSLIK-LAEEYNVAVYITNQVV--- 283
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G + V + P P G A+ +RL L +
Sbjct: 284 -ADPGGASMFVAD---------PKKPVGGHILAHASTTRLSLRKG--------------- 318
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
R +R + +P L +T C F I+ +G+
Sbjct: 319 ----------RGDQRICKIYDSPSLPETECVFSISEQGI 347
>gi|209946346|gb|ACI97404.1| spindle B [Drosophila simulans]
Length = 341
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 124/283 (43%), Gaps = 50/283 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GC +DRC GGG+ ITEL +G GKTQ LQL L QLP GGL Y+
Sbjct: 87 RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLCLCVQLPRELGGLGKGVAYI 146
Query: 79 HTEFPFPMRRLHQLSHTFR---PSNDHNPCDYIFVQSVHSVDQLLD-IMPKIESFIKNSS 134
TE FP RRL Q+S P + N IFV++ + LL ++ +I ++
Sbjct: 147 CTESSFPARRLLQMSKACEKRHPQMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I LI+IDS+AA+FR + + + A + AV+ NQV
Sbjct: 207 -----IGLIIIDSVAAIFR-----LYNXYLXXXXXMRRXXXXXXSYADKYNCAVVCVNQV 256
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
G+ P LG+ WA+ +RL +SR V ++++M
Sbjct: 257 AT--------------------RDGQDEIPCLGLQWAHLGRTRLRVSR----VPKQHRMG 292
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ + T R L ++++P + EF IT +GV
Sbjct: 293 DQLI------------TVRKLEILYSPETPNDFAEFLITADGV 323
>gi|384501022|gb|EIE91513.1| hypothetical protein RO3G_16224 [Rhizopus delemar RA 99-880]
Length = 207
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G I D L GGIP +ITE+V ES SGKTQ LQL LS Q P GGL S++Y+H
Sbjct: 81 LTTGDEIFDDILKGGIPLGTITEVVGESSSGKTQLGLQLCLSVQKPILEGGLEGSAVYIH 140
Query: 80 TEFPFPMRRLHQLSHTFRPSNDH 102
+E PFP RL+QL + N++
Sbjct: 141 SEGPFPSARLNQLVDKYTSDNNN 163
>gi|222617117|gb|EEE53249.1| hypothetical protein OsJ_36165 [Oryza sativa Japonica Group]
Length = 292
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 115/283 (40%), Gaps = 84/283 (29%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E SGKTQ C L ++ QLP GG +LY+
Sbjct: 93 QVTTGSRELDKILDGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYI 152
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F
Sbjct: 153 DAEGTFRPQRLLQIADRF------------------------------------------ 170
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
++++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 171 --AIMIVDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVITNQVV--- 224
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
V+G ++ G I P G A+ +RLFL +
Sbjct: 225 ---AQVDG------AAMF--GPQIKPIGGNIMAHASTTRLFLRKGR-------------- 259
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+E+ +C+ VV +P LA+ F+I+ EGV V+
Sbjct: 260 ----AEERICK-------VVSSPCLAEAEARFQISPEGVTDVK 291
>gi|222154113|gb|ACM47236.1| disrupted meiotic cDNA 1 protein [Triticum aestivum]
Length = 344
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 127/300 (42%), Gaps = 52/300 (17%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT +LL + + T G +D LGGGI ITE E SGKTQ L +S QL
Sbjct: 93 MTGSDLLIKRKSVVRITTGSQALDELLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 153 PLHMHGGNGKVAYIGTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
++ K+ + P RL+++DS+ ALFR DF +L +R ++ L +A
Sbjct: 213 LVAKM---------AEEPFRLLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIA 262
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F +AV +TNQV+ +P G+ + + P PA G A+ RL L
Sbjct: 263 EEFNVAVYITNQVI--ADPG---GGMFITD---------PKKPAGGHVLAHAATIRLMLR 308
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+ + E +C+ + AP+L + F+IT G+ V+
Sbjct: 309 KGK------------------GEQRICK-------IFDAPNLPEGEAVFQITTGGLMDVK 343
>gi|189210816|ref|XP_001941739.1| DNA repair protein RAD51 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330918612|ref|XP_003298289.1| hypothetical protein PTT_08944 [Pyrenophora teres f. teres 0-1]
gi|187977832|gb|EDU44458.1| DNA repair protein RAD51 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311328605|gb|EFQ93618.1| hypothetical protein PTT_08944 [Pyrenophora teres f. teres 0-1]
Length = 348
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 101 TTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 160
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R +++ + S + D + ++ D L+++ + + + S
Sbjct: 161 EGTFRPVRCLAVANRYGLSGEE-VLDNVAYARAYNSDHQLELLNQAAQMMTETRFS---- 215
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS AL+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 216 -LLVVDSATALYRTDFAG-RGELSARQTHLAKFMRTLQRLADEFGIAVIITNQVV 268
>gi|70995295|ref|XP_752407.1| DNA repair protein RAD51 [Aspergillus fumigatus Af293]
gi|66850042|gb|EAL90369.1| DNA repair protein RAD51, putative [Aspergillus fumigatus Af293]
gi|159131162|gb|EDP56275.1| DNA repair protein RAD51, putative [Aspergillus fumigatus A1163]
Length = 348
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 104 TTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D L ++ + + + S
Sbjct: 164 EGTFRPVRLLAVAQRYGLVGEE-VLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS +L+R+DF N +L R K L+ +A FG+AV++TNQVV
Sbjct: 219 -LLVVDSATSLYRTDF-NGRGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVV 271
>gi|195451479|ref|XP_002072940.1| GK13420 [Drosophila willistoni]
gi|194169025|gb|EDW83926.1| GK13420 [Drosophila willistoni]
Length = 355
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 23/226 (10%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ LGGGI SITE+ E GKTQ C L ++ QLP S G LY+ T
Sbjct: 116 TTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQNGGEGKCLYIDT 175
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ ++ + + D + ++ DQ ++ + S +
Sbjct: 176 EGTFRPERLSAIAQRYK-MEEPDVLDNVAYARAYNSDQQTKLLHMAAGMMFESRYA---- 230
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSF--LFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
++++DS AL+RS++ + +++ LF + ML+ +A FG+AV++TNQV +
Sbjct: 231 -ILIVDSAMALYRSEYVGRGELAARQNHLGLFLR---MLQRLADEFGVAVVITNQVTASV 286
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
+ G G + + P G A+ +RL+L + +
Sbjct: 287 D----------GGAGMFVADAKK--PIGGHIMAHASTTRLYLRKGK 320
>gi|407408409|gb|EKF31859.1| meiotic recombination protein DMC1, putative [Trypanosoma cruzi
marinkellei]
Length = 351
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 122/279 (43%), Gaps = 45/279 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ LGGGI SITE E +GKTQ L +++QLP+S GG + +Y+
Sbjct: 113 RMTTGSTALDQLLGGGIESMSITEAFGEFRTGKTQIAHTLCVTSQLPTSMGGGNGKVIYV 172
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ ++ F D + I V ++ + + ++ + + +
Sbjct: 173 DTESTFRPERIKPIAARFGLDAD-AVLNNILVARAYTHEHQMHLLSMVAAKMAEDQ---- 227
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+V+DSI ALFR DF +L +R K+ L +A F +AV +TNQVV
Sbjct: 228 -FGLLVVDSITALFRVDFSGR-GELAERQQKLAKMMSHLIKLAEEFNVAVYITNQVV--- 282
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G + V + P P G A+ +RL L +
Sbjct: 283 -ADPGGASMFVAD---------PKKPVGGHILAHASTTRLSLRK---------------- 316
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
G G + VC+ + +P L + C F I+ +G+
Sbjct: 317 -GRGDQR-VCK-------IYDSPSLPEVECVFSISEQGI 346
>gi|255722349|ref|XP_002546109.1| DNA repair protein RAD51 [Candida tropicalis MYA-3404]
gi|240136598|gb|EER36151.1| DNA repair protein RAD51 [Candida tropicalis MYA-3404]
Length = 364
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 89/176 (50%), Gaps = 9/176 (5%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 123 TTGSKQLDTLLGGGIETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLYIDT 182
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
E F RL +S R + N C D + ++ + L+++ + S S
Sbjct: 183 EGTFRPNRL--ISIAERYGLNANDCLDNVAYARAYNAEHQLNLLNIAAQMMAESRFS--- 237
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DSI +L+R+D+ +L R + L+ +A FG+AV++TNQVV
Sbjct: 238 --LLIVDSIMSLYRTDYAG-RGELSARQTHVARFMRTLQRLADEFGIAVVITNQVV 290
>gi|257077010|ref|ZP_05571371.1| DNA repair and recombination protein RadA [Ferroplasma acidarmanus
fer1]
Length = 335
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 102/237 (43%), Gaps = 23/237 (9%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T + +L K + G +D +GGG+ SITE E GSGKTQ LQL ++A +P
Sbjct: 88 TGEEILKRRKEVRKLSTGAQGLDNLIGGGLETQSITEFFGEFGSGKTQIMLQLAVNATMP 147
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GGL++ L + TE F R+ Q++ D I V ++ + + K
Sbjct: 148 EEQGGLNSDVLIIDTENTFRPERVIQMAKAKNLDPDET-LKRIHVARAYNAHHQILLAEK 206
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
K PI+L+++DS+ + FRS++ +++ L + +LK + F
Sbjct: 207 ASDIAK-----EFPIKLLIVDSLTSHFRSEYVGRGSLAERQQLLNKHMHDLLKFGTI-FN 260
Query: 186 LAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ VTNQV N + G P+ P G + RL+L +
Sbjct: 261 AVIAVTNQV--------------SANPAVFF--GDPMTPIGGNIVGHTATFRLYLRK 301
>gi|1816461|emb|CAB02454.1| uvsC [Emericella nidulans]
gi|259488442|tpe|CBF87878.1| TPA: UvsC protein [Source:UniProtKB/TrEMBL;Acc:P78579] [Aspergillus
nidulans FGSC A4]
Length = 348
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 104 TTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D L ++ + + + S
Sbjct: 164 EGTFRPVRLLAVAQRYGLVGEE-VLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS +L+R+DF N +L R K L+ +A FG+AV++TNQVV
Sbjct: 219 -LLVVDSATSLYRTDF-NGRGELSTRQTHLAKFMRTLQRLADEFGIAVVITNQVV 271
>gi|254166602|ref|ZP_04873456.1| DNA repair and recombination protein RadA [Aciduliprofundum boonei
T469]
gi|254168555|ref|ZP_04875399.1| DNA repair and recombination protein RadA [Aciduliprofundum boonei
T469]
gi|289596107|ref|YP_003482803.1| DNA repair and recombination protein RadA [Aciduliprofundum boonei
T469]
gi|197622610|gb|EDY35181.1| DNA repair and recombination protein RadA [Aciduliprofundum boonei
T469]
gi|197624212|gb|EDY36773.1| DNA repair and recombination protein RadA [Aciduliprofundum boonei
T469]
gi|289533894|gb|ADD08241.1| DNA repair and recombination protein RadA [Aciduliprofundum boonei
T469]
Length = 324
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 118/283 (41%), Gaps = 56/283 (19%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G D LGGG+ +ITE E GSGKTQ QL ++ QLP GGL ++Y+
Sbjct: 91 KLTTGSSDFDTLLGGGLETQAITEFFGEFGSGKTQIMHQLAVNVQLPKDKGGLEGHAVYI 150
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYI----FVQSVHSVDQLLDIMPKIESFIKNSS 134
TE F R+ Q++ + +P + + ++ +S Q+L + +E
Sbjct: 151 DTENTFRPERIKQMAEAL----ELDPVEVLKKIHVARAFNSNHQILLVDKAME------L 200
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
P+RL+++DS+ A FR+++ +++ L + +LK + + V VTNQV
Sbjct: 201 AKEYPVRLLIVDSLTAHFRAEYVGRGSLAERQQLLNKHMHDLLKFADLNNAV-VAVTNQV 259
Query: 195 VDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMV 254
N G ++ G P P G + R++L +
Sbjct: 260 SS--------------NPGMMF--GDPTQPIGGNIVGHTATYRIYLRK------------ 291
Query: 255 NGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
R +R ++ +P L D +I +EG+
Sbjct: 292 -------------SRGNKRIARLIDSPALPDGEVVIKIVKEGI 321
>gi|585771|sp|P37384.1|DMC1_LILLO RecName: Full=Meiotic recombination protein DMC1 homolog
gi|431168|dbj|BAA04845.1| RAD51-like protein [Lilium longiflorum]
Length = 349
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 120/282 (42%), Gaps = 52/282 (18%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D LGGGI ITE E SGKTQ L +S QLP S G + Y+
Sbjct: 112 RITTGSQALDELLGGGIETLQITEAFGEFRSGKTQIAHTLCVSTQLPVSMHGGNGKVAYI 171
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLDIMPKIESFIKNSSN 135
TE F R+ ++ F + I+ ++ H + LL + K+
Sbjct: 172 DTEGTFRPDRIVPIAERFGMDASAVLDNIIYARAYTYEHQYNLLLALAAKM--------- 222
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
S P RL+++DS+ ALFR DF +L +R ++ L +A F +AV +TNQV+
Sbjct: 223 SEEPFRLLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVI 281
Query: 196 DLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVN 255
+P G ++ S P PA G A+ RL L +
Sbjct: 282 --ADPG-----------GGMFISD-PKKPAGGHVLAHAATVRLMLRK------------- 314
Query: 256 GGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
G G E VC+ + AP+L ++ F+IT GV
Sbjct: 315 ----GKG-EQRVCK-------IFDAPNLPESEAVFQITPGGV 344
>gi|395646317|ref|ZP_10434177.1| DNA repair and recombination protein radA [Methanofollis liminatans
DSM 4140]
gi|395443057|gb|EJG07814.1| DNA repair and recombination protein radA [Methanofollis liminatans
DSM 4140]
Length = 326
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 103/240 (42%), Gaps = 22/240 (9%)
Query: 10 LLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHG 69
+L++ +K P D LGGG+ SITE+ E GSGK+Q Q+ ++ Q+P G
Sbjct: 74 VLEDRKEVKKLQTLVPEFDALLGGGMETKSITEVYGEFGSGKSQISHQMAVNCQIPLELG 133
Query: 70 GLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVH-----SVDQLLDIMP 124
GL+ S +Y+ TE F R+ Q+ P F++ +H + D + ++
Sbjct: 134 GLNGSCVYIDTENTFRPERIEQMVEGLDIPGYEVPPFTEFLERIHVAKGYTSDHQMLLLE 193
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
S P+RLI++DS+ A FR+++ L R + L +A F
Sbjct: 194 SARDLATEMKESDHPVRLIIVDSLTAHFRAEYAG-RGTLSVRQQKLNRHMYDLAKIAEEF 252
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
LVTNQV N G + G P P G + RL+L +++
Sbjct: 253 NAVALVTNQVQS--------------NPGVFF--GDPTKPIGGNIVGHAAKFRLYLRKSK 296
>gi|125536708|gb|EAY83196.1| hypothetical protein OsI_38408 [Oryza sativa Indica Group]
Length = 294
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 115/283 (40%), Gaps = 84/283 (29%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E SGKTQ C L ++ QLP GG +LY+
Sbjct: 95 QVTTGSRELDKILDGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYI 154
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ F
Sbjct: 155 DAEGTFRPQRLLQIADRF------------------------------------------ 172
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
++++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 173 --AIMIVDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVITNQVV--- 226
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
V+G ++ G I P G A+ +RLFL +
Sbjct: 227 ---AQVDG------AAMF--GPQIKPIGGNIMAHASTTRLFLRKGR-------------- 261
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+E+ +C+ VV +P LA+ F+I+ EGV V+
Sbjct: 262 ----AEERICK-------VVSSPCLAEAEARFQISPEGVTDVK 293
>gi|332020430|gb|EGI60850.1| DNA repair protein RAD51-like protein 1 [Acromyrmex echinatior]
Length = 340
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ LGGGI SITE+ E SGK+Q C L ++ QLP S GG LY+ T
Sbjct: 103 TTGSKELDKLLGGGIETGSITEIFGEFRSGKSQLCHTLAVNCQLPISMGGAEGKCLYIDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ ++ N + D + + D ++ + ++ +
Sbjct: 163 ENTFRPERLIAVAEKYKI-NGQSVLDNVACARAFNTDHQTKLL-----LLASAMMTEARY 216
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS L+R+D+ +L R + ML +A G+AV++TNQVV
Sbjct: 217 ALLIVDSATGLYRTDYTG-RGELSARQVHLGRFLRMLLRLADEHGIAVVITNQVV 270
>gi|67521554|ref|XP_658841.1| hypothetical protein AN1237.2 [Aspergillus nidulans FGSC A4]
gi|9904315|gb|AAB39323.2| ARECA [Emericella nidulans]
gi|40746674|gb|EAA65830.1| hypothetical protein AN1237.2 [Aspergillus nidulans FGSC A4]
Length = 344
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 100 TTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 159
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D L ++ + + + S
Sbjct: 160 EGTFRPVRLLAVAQRYGLVGEE-VLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 214
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS +L+R+DF N +L R K L+ +A FG+AV++TNQVV
Sbjct: 215 -LLVVDSATSLYRTDF-NGRGELSTRQTHLAKFMRTLQRLADEFGIAVVITNQVV 267
>gi|331242297|ref|XP_003333795.1| hypothetical protein PGTG_15555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312785|gb|EFP89376.1| hypothetical protein PGTG_15555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 514
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 98/211 (46%), Gaps = 44/211 (20%)
Query: 21 TVGCPIIDRCLG---GGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLY 77
T+G +DR G GGIP +TE+ ES GKT LQL+L+ QLP S GGL +Y
Sbjct: 94 TLGSADLDRVFGSPQGGIPTGLLTEIAGESACGKTCLALQLSLNVQLPHSLGGLLGGCIY 153
Query: 78 LHTEFPFPMRRLHQLS-----------HTFRPSNDHNPCDYIFVQS---------VHSVD 117
L TE FP RRLH+++ + P + V+S VH
Sbjct: 154 LCTESAFPTRRLHEMAAGLCARVKNILDSLDPETQELILQDLRVESLMENVHLTRVHDPQ 213
Query: 118 QLLD-IMPKIESFI--KNSSN--SRLPIRLIVIDSIAALFRSDFD--------------- 157
L+ I + F+ +N S S+ PIRLIV+DSI A+FR+D D
Sbjct: 214 ALIHTIHYYLPGFLGRQNESKGGSQRPIRLIVLDSIGAIFRTDLDPSRMSTTTMAKEHSQ 273
Query: 158 -NTMDDLKKRSFLFFKISGMLKAMAVGFGLA 187
N + +R+ +++ LK + +GLA
Sbjct: 274 NNAKFRMTERAAEMNQVADGLKELGARYGLA 304
>gi|6714639|dbj|BAA89533.1| LIM15/DMC1 homolog [Coprinopsis cinerea]
Length = 345
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 88/175 (50%), Gaps = 6/175 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
+ G ++D LGGG+ SITE+ E +GKTQ +++ AQLP +GG + Y+
Sbjct: 108 ISTGSKLVDGILGGGVMSQSITEVYGEYRTGKTQLAHTMSVVAQLPPEYGGAAGKVAYID 167
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
TE F R+ ++ F + ++ ++ +S Q+ I F ++
Sbjct: 168 TEGTFRPDRIRAIADRFGVDGTMALENILYARAFNSEHQMELINECSARFAEDKD----- 222
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
RL++IDSI ALFR D+ +L +R ++ L ++ F +AVL+TNQV
Sbjct: 223 FRLLIIDSIMALFRVDYSGR-GELSERQQKLAQMLSKLTKLSEEFNIAVLMTNQV 276
>gi|424812469|ref|ZP_18237709.1| DNA repair and recombination protein RadA [Candidatus Nanosalinarum
sp. J07AB56]
gi|339756691|gb|EGQ40274.1| DNA repair and recombination protein RadA [Candidatus Nanosalinarum
sp. J07AB56]
Length = 316
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 86/181 (47%), Gaps = 13/181 (7%)
Query: 18 EKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLY 77
++ T C D LGGGI ITE E GS KTQ QL ++ QLP GG+ ++Y
Sbjct: 81 KRITTSCEAFDEILGGGIESQCITEFYGEYGSAKTQISHQLAVNVQLPEGAGGMDRGAVY 140
Query: 78 LHTEFPFPMRRLHQLSHTFRPSNDHNP---CDYIFVQSVHSVDQLLDIMPKIESFIKNSS 134
+ TE F R+ Q++ D +P + I V + D + + + + + +
Sbjct: 141 IDTEDTFTPERVEQMAE----DKDLDPEEVLENIHVARAFNSDHQVLLAEEAQDICQEND 196
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
I L+V+DS+ A FRSD+ +L +R K L +A AV+VTNQV
Sbjct: 197 -----IGLVVVDSLTAQFRSDYVGR-GELAERQQKLNKHMNTLLRLANSHNAAVVVTNQV 250
Query: 195 V 195
+
Sbjct: 251 M 251
>gi|406702214|gb|EKD05279.1| RAD57 protein [Trichosporon asahii var. asahii CBS 8904]
Length = 479
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 131/332 (39%), Gaps = 87/332 (26%)
Query: 47 SGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTF--RPSNDHNP 104
S +GK+ L L LSAQLP+ S L L +E P RL ++ R + NP
Sbjct: 87 SAAGKSHLTLSLALSAQLPALSTS-PGSVLVLTSERPLATTRLMEMGEAMLARHPDPANP 145
Query: 105 C-----DYIFVQSVHSVDQLL-------------------------DIMPKIESFIKNSS 134
D + V D L DI PK E + S+
Sbjct: 146 TLDEMLDNVETSPVADADSLEHCLSFFLPPLLASRRTTEGSALLGEDIKPK-EDIPEASA 204
Query: 135 --------------NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAM 180
++ P+RL+++DS+AAL RS+ + L +RS +S LKA+
Sbjct: 205 IDGVNGVNGASTRKKAKPPVRLLILDSLAALLRSETSLSGGGLVQRSRRLCSLSDRLKAL 264
Query: 181 AVGFGLAVLVTNQVVDLM---EPNEGVNGLRVGNLGCL--YSSGRPICPALGIAWANCVN 235
A+ + LA++V NQV D+ +P G L S+G ALGI WANCVN
Sbjct: 265 ALEYHLAIVVVNQVSDVFIGEQPKAGPEMLYAAQARHFNGQSAGGRKEAALGIVWANCVN 324
Query: 236 SRLFLSRNEDFVV-----------------------------RENQMVNGGVGGS-GSED 265
+R+ L+R V RE Q GVG G E
Sbjct: 325 TRIMLARTGRRKVITLSDLNPDAQDSRKRKRVDTPAEPQQQGRERQHEAEGVGVQLGEEP 384
Query: 266 FVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
+ RR +H VF+ + S +F + + GV
Sbjct: 385 SLIRR----IHQVFSAYGPPGSADFILAKSGV 412
>gi|195399463|ref|XP_002058339.1| GJ16038 [Drosophila virilis]
gi|194150763|gb|EDW66447.1| GJ16038 [Drosophila virilis]
Length = 245
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 112/236 (47%), Gaps = 35/236 (14%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+CL GGI + ELV + G+GKTQ C++L L+ Q+P GL++ +LY T
Sbjct: 18 TTGITALDKCLRGGIRPGKVYELVGKPGTGKTQLCMKLCLNVQIPRYACGLASKALYFDT 77
Query: 81 EFPFPMRRLHQLSH----TFRPSNDHNPCDYIFVQSVHSVD-----QLLDIMPKIESFIK 131
F RL +L+ R ++ P +Q+V+ VD QL+ + +++
Sbjct: 78 RKDFNPARLKELADDLAARLRCTSISAPTATQMLQNVYYVDCRNTAQLVAGLLNCHKYLE 137
Query: 132 NSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVT 191
N I+LI++DSI+ R ++++ R+ L ++ ++ + + LA ++T
Sbjct: 138 KEPN----IKLIIVDSISFAIR-----MVNNVSDRTELLMEVHDGMRKLQLMHDLAFVIT 188
Query: 192 NQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFV 247
N N+G S + LG + +N R++L+ NE FV
Sbjct: 189 N--------NQGYRR---------RMSQFQLEAVLGRKHSQLINKRIWLTENECFV 227
>gi|115491377|ref|XP_001210316.1| DNA repair protein RAD51 [Aspergillus terreus NIH2624]
gi|114197176|gb|EAU38876.1| DNA repair protein RAD51 [Aspergillus terreus NIH2624]
Length = 348
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 104 TTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D L ++ + + + S
Sbjct: 164 EGTFRPVRLLAVAQRYGLVGEE-VLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS +L+R+DF N +L R K L+ +A FG+AV++TNQVV
Sbjct: 219 -LLVVDSATSLYRTDF-NGRGELSSRQTHLAKFLRTLQRLADEFGIAVVITNQVV 271
>gi|414881528|tpg|DAA58659.1| TPA: hypothetical protein ZEAMMB73_968311 [Zea mays]
Length = 268
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 46/253 (18%)
Query: 10 LLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHG 69
+ + L+ + T G ++ LGGGI C +TE+ G GKTQ +QL ++ Q+P G
Sbjct: 1 MFSDELSQKHITTGSGDLNDILGGGIHCKEVTEIGGVPGVGKTQLGIQLAINVQIPVECG 60
Query: 70 GLSASSLYLHTEFPFPMRRLHQLSHT-FRPSNDHNPCDY------------------IFV 110
GL ++Y+ E F + R++Q++ R +H P + I+
Sbjct: 61 GLGGKAVYI--EGSFMVERVYQIAEGCIRDILEHFPHSHEKSSSVQKQLQPERFLADIYY 118
Query: 111 QSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLF 170
+ S + + ++ +E F++ + +R+++IDS+ FR DF +DL R+ +
Sbjct: 119 FRICSYTEQIAVINYMEKFLREHKD----VRIVIIDSVTFHFRQDF----EDLALRTRVL 170
Query: 171 FKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAW 230
+S L +A + LAV++ NQV + EG L + ALG +W
Sbjct: 171 SGLSLKLMKIAKTYNLAVVLLNQVT--TKFTEGSFQLTL---------------ALGDSW 213
Query: 231 ANCVNSRLFLSRN 243
++ +RL L N
Sbjct: 214 SHSCTNRLILHWN 226
>gi|198420224|ref|XP_002126934.1| PREDICTED: similar to RAD51 homolog isoform 1 [Ciona intestinalis]
Length = 338
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 20/225 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C + + QLP GG LY+
Sbjct: 100 QITTGSKELDKLLQGGIETGSITEIFGEFRTGKTQICHTIAATCQLPIEQGGGEGKCLYI 159
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + N + D + ++ D ++ + + + S +R
Sbjct: 160 DTEGTFRPERLLAVAERY-GLNGADVLDNVAYARAYNTDHQSQLLIQAAAMM---SETRY 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
+ IV+DS AL+R+D+ +L R + L +A FG+AV++TNQVV
Sbjct: 216 AV--IVVDSATALYRTDYSG-RGELSARQMHLGRFLRTLLRLADEFGVAVIITNQVV--- 269
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRN 243
V+G G + C P P G A+ +RL+L +
Sbjct: 270 ---AQVDG---GAMFC----ADPKKPIGGHIMAHASTTRLYLRKG 304
>gi|255940094|ref|XP_002560816.1| Pc16g04650 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585439|emb|CAP93135.1| Pc16g04650 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 344
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGG+ SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 100 TTGSKRLDTLLGGGVETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 159
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D L ++ + + + S
Sbjct: 160 EGTFRPVRLLAVAQRYGLVGEE-VLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 214
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS +L+R+DF N +L R K L+ +A FG+AV++TNQVV
Sbjct: 215 -LLVVDSATSLYRTDF-NGRGELASRQTHLAKFMRTLQRLADEFGIAVVITNQVV 267
>gi|425774458|gb|EKV12765.1| DNA repair protein RAD51, putative [Penicillium digitatum PHI26]
Length = 615
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 371 TTGSKRLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 430
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D L ++ + + + S
Sbjct: 431 EGTFRPVRLLAVAQRYGLVGEEV-LDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 485
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS +L+R+DF N +L R K L+ +A FG+AV++TNQVV
Sbjct: 486 -LLVVDSATSLYRTDF-NGRGELASRQTHLAKFMRTLQRLADEFGIAVVITNQVV 538
>gi|115484153|ref|NP_001065738.1| Os11g0146800 [Oryza sativa Japonica Group]
gi|21322144|gb|AAK55555.2|AF375982_1 Dmc1 [Oryza sativa Japonica Group]
gi|14588672|dbj|BAB61838.1| RiLIM15B [Oryza sativa]
gi|18700485|dbj|BAB85214.1| DMC1 [Oryza sativa Japonica Group]
gi|21805945|gb|AAM76792.1| Dmc1 protein type B [Oryza sativa Indica Group]
gi|113644442|dbj|BAF27583.1| Os11g0146800 [Oryza sativa Japonica Group]
Length = 344
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 124/297 (41%), Gaps = 52/297 (17%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT +LL + + T G +D LGGGI ITE E SGKTQ L +S QL
Sbjct: 93 MTGSDLLIKRKSVVRITTGSQALDELLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 153 PIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P RL+++DS+ ALFR DF +L +R ++ L +A
Sbjct: 213 LAAKM---------AEEPFRLLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIA 262
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F +AV +TNQV+ +P G+ + + P PA G A+ RL L
Sbjct: 263 EEFNVAVYITNQVI--ADPG---GGMFITD---------PKKPAGGHVLAHAATIRLMLR 308
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
+ + E VC+ + AP+L + F++T G+
Sbjct: 309 KGK------------------GEQRVCK-------IFDAPNLPEGEAVFQVTSGGIM 340
>gi|190347494|gb|EDK39771.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 333
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 11/177 (6%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 92 TTGSKQLDTLLGGGIETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLYIDT 151
Query: 81 EFPFPMRRLHQLSHTF--RPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F RL ++ + P + + Y + QLL++ ++ + SR
Sbjct: 152 EGTFRPVRLVSIAQRYGLNPDDCLDNVAYARAYNAEHQFQLLNMAAQM------MAESRF 205
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DSI +L+R+D+ +L R K L+ +A FG+AV++TNQVV
Sbjct: 206 S--LLIVDSIMSLYRTDYSG-RGELSARQAHVAKYMRTLQRLADEFGIAVVITNQVV 259
>gi|145952326|gb|ABP98984.1| DMC1 [Hieracium caespitosum]
gi|145952328|gb|ABP98985.1| DMC1 [Hieracium caespitosum]
Length = 343
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 118/282 (41%), Gaps = 52/282 (18%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D LGGGI ITE E SGKTQ L +S QLP++ G + Y+
Sbjct: 106 RITTGSQALDELLGGGIETLQITEAFGEFRSGKTQLAHTLCVSTQLPTNMKGGNGKVAYI 165
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLDIMPKIESFIKNSSN 135
TE F R+ ++ F + I+ ++ H + LL + K+
Sbjct: 166 DTEGTFRPDRIVPIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKM--------- 216
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
S P RL+++DS+ ALFR DF +L +R ++ L +A F +AV +TNQV+
Sbjct: 217 SEEPFRLLIVDSVIALFRVDFTGR-GELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVI 275
Query: 196 DLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVN 255
+P GV S P PA G A+ RL + +
Sbjct: 276 --ADPGGGV----------FISD--PKKPAGGHVLAHAATVRLMFRKGK----------- 310
Query: 256 GGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
E VC+ V AP+L ++ F+IT G+
Sbjct: 311 -------GEQRVCK-------VFDAPNLPESEAIFQITSGGI 338
>gi|110669303|ref|YP_659114.1| DNA repair and recombination protein RadA [Haloquadratum walsbyi
DSM 16790]
gi|385804867|ref|YP_005841267.1| DNA repair and recombination protein RadA [Haloquadratum walsbyi
C23]
gi|121692072|sp|Q18EU1.1|RADA_HALWD RecName: Full=DNA repair and recombination protein RadA
gi|109627050|emb|CAJ53526.1| DNA repair and recombination protein RadA [Haloquadratum walsbyi
DSM 16790]
gi|339730359|emb|CCC41689.1| DNA repair and recombination protein RadA [Haloquadratum walsbyi
C23]
Length = 343
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 42/256 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K + P +D LGGGI SITE+ E G+GK+Q Q+ ++ QLP HGGL +++++
Sbjct: 81 KLSWKIPEVDELLGGGIETQSITEVYGEFGAGKSQVTHQMAVNVQLPPEHGGLGGAAIFV 140
Query: 79 HTEFPFPMRRLHQLSHTF----------------RPSNDHNP-------CDYIFVQSVHS 115
+E F R+ + P +D D+I V +
Sbjct: 141 DSEDTFRPERIDDMLRGLDDEIITDLLERREIEGTPGDDETMKALLDSFLDHIHVAKAFN 200
Query: 116 VDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISG 175
+ + + K + +++ +S P+RL+ +DS+ A FR+++ +++ L +
Sbjct: 201 SNHQILLAEKAKELARDNQDSGFPVRLLCVDSLTAHFRAEYVGRGSLAERQQKLNKHLHD 260
Query: 176 MLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVN 235
+++ + + AVLVTNQV N + G P P G +
Sbjct: 261 LMRIGDL-YNTAVLVTNQV--------------ASNPDSYF--GDPTQPIGGNILGHTST 303
Query: 236 SRLFL--SRNEDFVVR 249
R++L S+N+ +VR
Sbjct: 304 FRMYLRKSKNDKRIVR 319
>gi|449017784|dbj|BAM81186.1| similar to DNA repair and recombination protein Rad57p/XRCC2
[Cyanidioschyzon merolae strain 10D]
Length = 413
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 114/241 (47%), Gaps = 53/241 (21%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
++GCP++D+ + I C ++TE+ E+GSGKTQF LQL + + G+ +LYLHT
Sbjct: 151 SLGCPLLDQVVC--IRCGAVTEVYGEAGSGKTQFLLQLA------ARNRGM---TLYLHT 199
Query: 81 E-FPFPMRRLHQLSHTFRPSNDHNPCDY----------IFVQS-VHSVDQLLDIMPKI-- 126
E FP RL ++ S D++ D I V++ H L + I
Sbjct: 200 ENGRFPSERLVDIARATASSADNDGNDIARSPESILNRILVETGAHVARSPLSLSRYIRG 259
Query: 127 --ESFIKNSSNSRLPIRLIVIDSIAALFRSDFDN-TMDDLKKRSFLFFKISGMLK-AMAV 182
F+++S + +L++IDSIAA+ R ++N L KR+ F+ L+ M
Sbjct: 260 PFRKFLEHSPDP----KLLIIDSIAAVIRHAYENRKRGALSKRARWVFRFVNTLRLLMRE 315
Query: 183 GFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
LAV+ +NQV + + PALG W+ CVN+R+ L R
Sbjct: 316 HRSLAVVASNQVAQRADGE--------------------LVPALGAVWSQCVNTRIRLQR 355
Query: 243 N 243
+
Sbjct: 356 S 356
>gi|363741358|ref|XP_415870.3| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD51 homolog 3
[Gallus gallus]
Length = 366
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 39/252 (15%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T LL+ T C +D LGGG+ ITE+ G GKTQ C+QL + Q+P
Sbjct: 77 TALELLEEEQTQGFIITFCSALDNILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQIP 136
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDHNPCDYIFVQSVHSVDQLL 120
GG++ ++++ TE F + R ++ H + H D++ S++ +L
Sbjct: 137 ECFGGVAGEAVFIDTEGSFMVDRAADIATACVRHCQLIAEAHQEEDHLQALETFSLESIL 196
Query: 121 ------------DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSF 168
+++ ++ + + + +RL+VID IA FR DF +DL R+
Sbjct: 197 SHIYYFRCRDYIELLAQV-YLLPDFLSEHSKVRLVVIDGIAFPFRHDF----EDLSLRTR 251
Query: 169 LFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGI 228
L ++ L +A AV++TNQ+ N+ + + PALG
Sbjct: 252 LLNGLAQQLIIIANDHKSAVVLTNQMTTRFGQNQSM-----------------LVPALGE 294
Query: 229 AWANCVNSRLFL 240
+W + RL
Sbjct: 295 SWGHAATVRLIF 306
>gi|83766628|dbj|BAE56768.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868385|gb|EIT77600.1| DNA repair protein [Aspergillus oryzae 3.042]
Length = 610
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 5/173 (2%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGGIP +TE+ ESGSGKTQF L L L+ QLPS GL +++Y+ TE P
Sbjct: 158 LDELLGGGIPTGYVTEVTGESGSGKTQFLLSLLLAVQLPSPK-GLGKNAVYISTEAPLST 216
Query: 87 RRLHQLSHTFRPSNDHNPCDYI-FVQSVHSVDQL-LDIMPKIESFIKNSSNSRLPIRLIV 144
RL QL ++ P P D ++++ S++ + L+ I ++ + R + L+V
Sbjct: 217 PRLSQLINS-NPYLSTLPRDRAPTLENILSINAMDLESQDHILNYQLPVAIQRYNVGLVV 275
Query: 145 IDSIAALFRSDF-DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
IDSI + +R++ + + L RS K+ ML+ +AV +A++V NQV D
Sbjct: 276 IDSITSNYRAEHTSHNILGLSTRSGELTKLGQMLRNLAVQEDIAIVVANQVSD 328
>gi|380492247|emb|CCF34743.1| DNA repair protein rhp51 [Colletotrichum higginsianum]
Length = 350
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI S+TEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 106 TTGSKQLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 165
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ F S + D + ++ D L ++ + + + + S
Sbjct: 166 EGTFRPVRLLAVANRFGLSGEE-VLDNVAYARAYNSDHQLQLLQQAGAMMCETRFS---- 220
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 221 -LLIVDSATALYRTDFLG-RGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVV 273
>gi|317143045|ref|XP_001818770.2| DNA repair protein (Rad57) [Aspergillus oryzae RIB40]
Length = 600
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 5/173 (2%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGGIP +TE+ ESGSGKTQF L L L+ QLPS GL +++Y+ TE P
Sbjct: 148 LDELLGGGIPTGYVTEVTGESGSGKTQFLLSLLLAVQLPSPK-GLGKNAVYISTEAPLST 206
Query: 87 RRLHQLSHTFRPSNDHNPCDYI-FVQSVHSVDQL-LDIMPKIESFIKNSSNSRLPIRLIV 144
RL QL ++ P P D ++++ S++ + L+ I ++ + R + L+V
Sbjct: 207 PRLSQLINS-NPYLSTLPRDRAPTLENILSINAMDLESQDHILNYQLPVAIQRYNVGLVV 265
Query: 145 IDSIAALFRSDF-DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
IDSI + +R++ + + L RS K+ ML+ +AV +A++V NQV D
Sbjct: 266 IDSITSNYRAEHTSHNILGLSTRSGELTKLGQMLRNLAVQEDIAIVVANQVSD 318
>gi|310793292|gb|EFQ28753.1| hypothetical protein GLRG_03897 [Glomerella graminicola M1.001]
Length = 350
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI S+TEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 106 TTGSKQLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 165
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ F S + D + ++ D L ++ + + + + S
Sbjct: 166 EGTFRPVRLLAVANRFGLSGEE-VLDNVAYARAYNSDHQLQLLQQAGAMMCETRFS---- 220
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 221 -LLIVDSATALYRTDFLG-RGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVV 273
>gi|328875049|gb|EGG23414.1| putative DNA repair protein [Dictyostelium fasciculatum]
Length = 359
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 21/224 (9%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GG SITEL E +GKTQ C L ++ QL + GG +LY+ T
Sbjct: 123 TTGSKELDNLLDGGFEAGSITELFGEFRTGKTQICHTLCVTCQLSINQGGGEGRALYIDT 182
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ F + + + ++ ++ D L ++ + + + S S
Sbjct: 183 EGTFRPERLLEIAERFGLDGESVLNNVAYARA-YNTDHQLQLLVQASAMMSESRYS---- 237
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+++DS AL+R+D+ +L R + L+ +A FG+ V++TNQVV ++
Sbjct: 238 -LLIVDSATALYRTDYSG-RSELSDRQRHLARFLRGLQRLADEFGIVVIITNQVVATVD- 294
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
G ++++ PI P G A+ +RL L + +
Sbjct: 295 ------------GSVFNAN-PIKPIGGHIIAHASTTRLSLRKGK 325
>gi|115487302|ref|NP_001066138.1| Os12g0143800 [Oryza sativa Japonica Group]
gi|14669854|dbj|BAB62026.1| RiLIM15A [Oryza sativa]
gi|18700483|dbj|BAB85213.1| DMC1 [Oryza sativa Japonica Group]
gi|113648645|dbj|BAF29157.1| Os12g0143800 [Oryza sativa Japonica Group]
gi|215766778|dbj|BAG99006.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 344
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 126/297 (42%), Gaps = 52/297 (17%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T +LL + + T G +D+ LGGGI ITE E SGKTQ L +SAQL
Sbjct: 93 ITGSDLLIKRKSVVRITTGSQALDKLLGGGIETLCITEAFGEFRSGKTQLAHTLCVSAQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 153 PIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P RL+++DS+ ALFR DF +L +R ++ L +A
Sbjct: 213 LAAKM---------AEEPFRLLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIA 262
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F +AV +TNQV+ +P G+ + +L PA G A+ RL L
Sbjct: 263 EEFNVAVYITNQVI--ADPG---GGMFITDLK---------KPAGGHVLAHAATIRLMLR 308
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
+ + E VC+ + AP+L + F++T G+
Sbjct: 309 KGK------------------GEQRVCK-------IFDAPNLPEGEAVFQVTSGGIM 340
>gi|358389137|gb|EHK26730.1| meiosis defective protein MEI3, partial [Trichoderma virens Gv29-8]
Length = 356
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI S+TEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 113 TTGSKNLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 172
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ F S + D + ++ D L ++ + + + + S
Sbjct: 173 EGTFRPVRLLAVANRFGLSGEE-VLDNVAYARAYNSDHQLQLLNQAAAMMCETRFS---- 227
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 228 -LLIVDSATSLYRTDFTG-RGELSNRQTHLAKFMRTLQRLADEFGIAVVITNQVV 280
>gi|7229683|gb|AAF42940.1|AF234170_1 DMC1 protein [Hordeum vulgare]
gi|326513156|dbj|BAK06818.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|400202051|gb|AFP73609.1| disrupted meiotic cDNA1 protein [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 126/300 (42%), Gaps = 52/300 (17%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT +LL + + T G +D LGGGI ITE E SGKTQ L +S QL
Sbjct: 93 MTGSDLLIKRKSVVRITTGSQALDELLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 153 PLHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P RL+++DS+ ALFR DF +L +R ++ L +A
Sbjct: 213 LAAKM---------AEEPFRLLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIA 262
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F +AV +TNQV+ +P G+ + + P PA G A+ RL L
Sbjct: 263 EEFNVAVYITNQVI--ADPG---GGMFITD---------PKKPAGGHVLAHAATIRLMLR 308
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+ + E VC+ + AP+L + F+IT G+ V+
Sbjct: 309 KGK------------------GEQRVCK-------IFDAPNLPEGEAVFQITTGGLADVK 343
>gi|224127362|ref|XP_002320055.1| predicted protein [Populus trichocarpa]
gi|222860828|gb|EEE98370.1| predicted protein [Populus trichocarpa]
Length = 283
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 118/268 (44%), Gaps = 54/268 (20%)
Query: 7 PQNLLD-----NPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
PQN D L T + T C +D LGGGI C +TE+ G GKTQ +QL ++
Sbjct: 8 PQNAWDLLHEERSLMT-RLTTSCADLDDILGGGISCKQVTEIGGVPGIGKTQLGIQLAVN 66
Query: 62 AQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPS---------NDHNPC------- 105
Q+PS GGL ++Y+ TE F R +++ D C
Sbjct: 67 VQMPSFCGGLGGKAIYIDTEGSFMGERAQEIAEACVEDISEYKRFLHKDSQACQGEIQGK 126
Query: 106 ---DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDD 162
I+ + S + + ++ +E FI + + +++++IDS+A FR F +D
Sbjct: 127 DVLQNIYFFRICSYTEQIALINYLEEFISDHKD----VKIVIIDSVAFHFRQGF----ED 178
Query: 163 LKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD-LMEPNEGVNGLRVGNLGCLYSSGRP 221
L R+ + +++ L +A LAV++ NQV ME G+ +S
Sbjct: 179 LALRTRILGEMALKLVKLAKMCNLAVVLLNQVTTRYME----------GSFQLSFS---- 224
Query: 222 ICPALGIAWANCVNSR--LFLSRNEDFV 247
LG W+ C +R L+ +RNE +
Sbjct: 225 ----LGDRWSRCCTNRIILYWNRNERYA 248
>gi|18461375|gb|AAL71908.1|AF265549_1 meiotic protein Dmc1B [Oryza sativa Indica Group]
Length = 344
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 125/297 (42%), Gaps = 52/297 (17%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT +LL + + T G +D LGGGI ITE E SGKTQ L +S QL
Sbjct: 93 MTGSDLLIKRKSVVRITTGSQALDELLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 153 PIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P RL+++DS+ ALFR DF +L +R ++ L +A
Sbjct: 213 LAAKM---------AEEPFRLLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIA 262
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F +AV +TNQV+ +P G+ + + P PA G A+ RL L
Sbjct: 263 EEFNVAVYITNQVI--ADPG---GGMFITD---------PKKPAGGHVLAHAATIRLMLR 308
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
+ G G E VC+ + AP+L + F++T G+
Sbjct: 309 K-----------------GKG-EQRVCK-------IFDAPNLPEGEAVFQVTSGGIM 340
>gi|71659624|ref|XP_821533.1| meiotic recombination protein DMC1 [Trypanosoma cruzi strain CL
Brener]
gi|70886915|gb|EAN99682.1| meiotic recombination protein DMC1, putative [Trypanosoma cruzi]
Length = 351
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 121/279 (43%), Gaps = 45/279 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ LGGGI SITE E +GKTQ L ++ QLP+S GG + +Y+
Sbjct: 113 RMTTGSTALDQLLGGGIESMSITEAFGEFRTGKTQIAHTLCVTCQLPTSMGGGNGKVIYV 172
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ ++ F D + I V ++ + + ++ + + +
Sbjct: 173 DTESTFRPERIKPIAARFGLDAD-AVLNNILVARAYTHEHQMHLLSMVAAKMAEDQ---- 227
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+V+DSI ALFR DF +L +R K+ L +A F +AV +TNQVV
Sbjct: 228 -FGLLVVDSITALFRVDFSG-RGELAERQQKLAKMMSHLIKLAEEFNVAVYITNQVV--- 282
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G + V + P P G A+ +RL L +
Sbjct: 283 -ADPGGASMFVAD---------PKKPVGGHILAHASTTRLSLRK---------------- 316
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
G G + VC+ + +P L + C F I+ +G+
Sbjct: 317 -GRGDQR-VCK-------IYDSPSLPEVECVFSISEQGI 346
>gi|242082562|ref|XP_002441706.1| hypothetical protein SORBIDRAFT_08g001020 [Sorghum bicolor]
gi|241942399|gb|EES15544.1| hypothetical protein SORBIDRAFT_08g001020 [Sorghum bicolor]
Length = 344
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 125/297 (42%), Gaps = 52/297 (17%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT +LL + + T G +D LGGGI ITE E SGKTQ L +S QL
Sbjct: 93 MTGNDLLLKRKSVVRITTGSQALDELLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 153 PIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P RL+++DS+ ALFR DF +L +R ++ L +A
Sbjct: 213 LAAKM---------AEEPFRLLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIA 262
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F +AV +TNQV+ +P G ++ + P PA G A+ RL L
Sbjct: 263 EEFNVAVYITNQVI--ADPG-----------GGMFIT-DPKKPAGGHVLAHAATIRLMLR 308
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
+ G G E VC+ + AP+L + F++T G+
Sbjct: 309 K-----------------GKG-EQRVCK-------IFDAPNLPEGEAVFQVTSGGIM 340
>gi|260944444|ref|XP_002616520.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238850169|gb|EEQ39633.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 339
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGG+ SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 97 TTGSKQLDTLLGGGVETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLYIDT 156
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + D + ++ + ++ + + S S
Sbjct: 157 EGTFRPVRLVSIAQRYGLNPD-DCLDNVAYARAYNAEHQFQLLHQAAQMMSESRFS---- 211
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DSI +L+R+D+ +L R K L+ +A FG+AV++TNQVV
Sbjct: 212 -LLIVDSIMSLYRTDYSG-RGELSARQTHVAKFMRTLQRLADEFGIAVVITNQVV 264
>gi|448726994|ref|ZP_21709372.1| DNA repair and recombination protein RadA [Halococcus morrhuae DSM
1307]
gi|445792363|gb|EMA42969.1| DNA repair and recombination protein RadA [Halococcus morrhuae DSM
1307]
Length = 344
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 134/321 (41%), Gaps = 67/321 (20%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G T ++L++ K + +D LGGG+ SITE+ E G+GK+Q QL++
Sbjct: 64 IGGFETGADVLEHRNEIGKLSWQVDEVDDLLGGGVETQSITEVYGEFGAGKSQVTHQLSV 123
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTF----------------RPSNDHNP 104
+ QLP+ +GGL S++++ +E F R+ ++ H P +D
Sbjct: 124 NVQLPNEYGGLEGSAIFIDSEDTFRPERIAEMVHGLPNDAIAAAMDQREIEGSPESDEAM 183
Query: 105 CDYI--------FVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDF 156
++I ++ +S Q+L + K + +S P+RL+ IDS+ A FR+++
Sbjct: 184 DEFIESILDNIHVAKAFNSNHQIL-LAQKAQDIASEHEDSEWPVRLVCIDSLTAHFRAEY 242
Query: 157 DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLY 216
+ +++ L + + K + F A +VTNQV N +
Sbjct: 243 VGRGELAQRQQKLNKHLHDIDKVGNL-FNAATVVTNQV--------------ASNPDSYF 287
Query: 217 SSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLH 276
G P P G + R++L + + T+R +
Sbjct: 288 --GDPTQPIGGNILGHKSTFRMYLRK-------------------------SKGTKRIVR 320
Query: 277 VVFAPHLADTSCEFEITREGV 297
+V AP+LAD + EG+
Sbjct: 321 LVDAPNLADGEAVMRVEGEGL 341
>gi|326931485|ref|XP_003211859.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Meleagris
gallopavo]
Length = 355
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 37/233 (15%)
Query: 24 CPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFP 83
C +D LGGG+ ITE+ G GKTQ C+QL + Q+P GG++ ++++ TE
Sbjct: 82 CSALDNILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGS 141
Query: 84 FPMRRLHQLS-----HTFRPSNDHNPCDYIFVQSVHSVDQLLDIMP--KIESFIKNSSNS 136
F + R ++ H + H D++ S++ +L + + +I+ +
Sbjct: 142 FMVDRAADIATACVQHCQLIAEAHQEEDHLKALETFSLESILSHIYYFRCRDYIELLAQV 201
Query: 137 RL---------PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLA 187
L +RL+VID IA FR DF +DL R+ L ++ L +A A
Sbjct: 202 YLLPDFLSEHSKVRLVVIDGIAFPFRHDF----EDLSLRTRLLNGLAQQLIIIANDHKSA 257
Query: 188 VLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
V++TNQ+ N+ + + PALG +W + RL
Sbjct: 258 VVLTNQMTTRFGQNQSM-----------------LVPALGESWGHAATVRLIF 293
>gi|82617156|emb|CAI64063.1| DNA repair and recombination protein [uncultured archaeon]
gi|82617268|emb|CAI64174.1| DNA repair and recombination protein [uncultured archaeon]
gi|268323001|emb|CBH36589.1| DNA repair and recombination protein radA [uncultured archaeon]
Length = 315
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 1/156 (0%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G T +L L K T G D LGGG+ ++TE E GSGKTQ QL +
Sbjct: 60 IGGFETGDKILGRRLEIGKLTTGSTSFDDLLGGGLETQALTEFYGEFGSGKTQIAHQLAV 119
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLL 120
+ QLP +GGL+ S + + TE F R+ ++ D + ++ +S Q+L
Sbjct: 120 NVQLPPENGGLNGSVIIIDTENTFRPERIKDMAEGASLDPDEILKNIHVARAYNSNHQIL 179
Query: 121 DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDF 156
++ K E + ++ P+RL+++DS A FRS++
Sbjct: 180 -LVDKAERLAEELIDTEKPVRLLIVDSATAHFRSEY 214
>gi|346975010|gb|EGY18462.1| DNA repair protein RAD51 [Verticillium dahliae VdLs.17]
Length = 354
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
+ G +D L GGI SITEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 110 STGSKQLDTLLAGGIETGSITELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 169
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ F S + D + ++ D L ++ + + + + S
Sbjct: 170 EGTFRPVRLLAVANRFGLSGEE-VLDNVAYARAYNSDHQLQLLQQASAMMCETRFS---- 224
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 225 -LLIVDSATALYRTDFVG-RGELSSRQTHLAKFLRTLQRLADEFGIAVVITNQVV 277
>gi|71663769|ref|XP_818873.1| meiotic recombination protein DMC1 [Trypanosoma cruzi strain CL
Brener]
gi|70884148|gb|EAN97022.1| meiotic recombination protein DMC1, putative [Trypanosoma cruzi]
Length = 351
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 121/279 (43%), Gaps = 45/279 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ LGGGI SITE E +GKTQ L ++ QLP+S GG + +Y+
Sbjct: 113 RMTTGSTALDQLLGGGIESMSITEAFGEFRTGKTQIAHTLCVTCQLPTSMGGGNGKVIYV 172
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ ++ F D + I V ++ + + ++ + + +
Sbjct: 173 DTESTFRPERIKPIAARFGLDAD-AVLNNILVARAYTHEHQMHLLSMVAAKMAEDQ---- 227
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+V+DSI ALFR DF +L +R K+ L +A F +AV +TNQVV
Sbjct: 228 -FGLLVVDSITALFRVDFSG-RGELAERQQKLAKMMSHLIKLAEEFNVAVYITNQVV--- 282
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G + V + P P G A+ +RL L +
Sbjct: 283 -ADPGGASMFVAD---------PKKPVGGHILAHASTTRLSLRK---------------- 316
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
G G + VC+ + +P L + C F I+ +G+
Sbjct: 317 -GRGDQR-VCK-------IYDSPSLPEVECVFSISEQGI 346
>gi|291225492|ref|XP_002732740.1| PREDICTED: RAD51 homolog c-like [Saccoglossus kowalevskii]
Length = 357
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 44/244 (18%)
Query: 24 CPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFP 83
C +D LGGG+P ITE G GKTQ +QL + Q+PS GG+ ++Y+ TE
Sbjct: 82 CEELDTILGGGVPLAKITEFCGAPGIGKTQIGIQLAVDVQIPSVFGGVEGEAIYIDTEGS 141
Query: 84 FPMRRL-----HQLSHTFRPSNDHNP--------------CDYIFVQSVHSVDQLLDIMP 124
F + R +SH S ++NP I+V + +L+ +
Sbjct: 142 FMVHRAVDIAQATVSHCI-SSIENNPKLKEVLNDFTVNSILSKIYVYRCNDYIELIATVN 200
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGF 184
+ F+ ++LIV+DSIA FR++F DD+ R+ L ++ L MA
Sbjct: 201 LLPQFLTEHPR----VKLIVLDSIAFHFRNNF----DDMALRTRLLNGLAQNLIRMASQH 252
Query: 185 GLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSR--LFLSR 242
LAV++TNQ+ ++ ++ + PALG +W + R LF
Sbjct: 253 KLAVVLTNQMTTKIKSDD--------------RGQSHVVPALGESWGHASTLRIVLFWQH 298
Query: 243 NEDF 246
N+ +
Sbjct: 299 NQRY 302
>gi|302413964|ref|XP_003004814.1| DNA repair protein RAD51 [Verticillium albo-atrum VaMs.102]
gi|261355883|gb|EEY18311.1| DNA repair protein RAD51 [Verticillium albo-atrum VaMs.102]
Length = 355
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
+ G +D L GGI SITEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 110 STGSKQLDTLLAGGIETGSITELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 169
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ F S + D + ++ D L ++ + + + + S
Sbjct: 170 EGTFRPVRLLAVANRFGLSGEE-VLDNVAYARAYNSDHQLQLLQQASAMMCETRFS---- 224
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 225 -LLIVDSATALYRTDFVG-RGELSSRQTHLAKFLRTLQRLADEFGIAVVITNQVV 277
>gi|226501424|ref|NP_001141379.1| meiotic recombination protein DMC1 isoform 1 [Zea mays]
gi|194698360|gb|ACF83264.1| unknown [Zea mays]
gi|194704244|gb|ACF86206.1| unknown [Zea mays]
gi|195626386|gb|ACG35023.1| meiotic recombination protein DMC1 [Zea mays]
gi|414882036|tpg|DAA59167.1| TPA: meiotic recombination protein DMC1 isoform 1 [Zea mays]
gi|414882037|tpg|DAA59168.1| TPA: meiotic recombination protein DMC1 isoform 2 [Zea mays]
Length = 344
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 127/300 (42%), Gaps = 52/300 (17%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT +LL + + T G +D LGGGI ITE E SGKTQ L +S QL
Sbjct: 93 MTGNDLLLKRKSVVRITTGSQALDELLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 153 PIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P +L+++DS+ ALFR DF +L +R ++ L +A
Sbjct: 213 LAAKM---------AEEPFKLLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIA 262
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F +AV +TNQV+ +P G ++ + P PA G A+ RL L
Sbjct: 263 EEFNVAVYITNQVI--ADPG-----------GGMFIT-DPKKPAGGHVLAHAATIRLMLR 308
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+ G G E VC+ + AP+L + F++T G+ V+
Sbjct: 309 K-----------------GKG-EQRVCK-------IFDAPNLPEGEAVFQVTSGGIMDVK 343
>gi|403413652|emb|CCM00352.1| predicted protein [Fibroporia radiculosa]
Length = 340
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 101 TTGSKNLDSLLGGGIETGSITELFGEFRTGKSQICHTLAVTCQLPVDMGGGEGKCLYIDT 160
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ N D + ++ D ++ + + S SR
Sbjct: 161 EGTFRPVRLLAVAERL-GLNGEEVLDNVAYARAYNADHQYQLLTSASALM---SESRFC- 215
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L++IDS AL+R+DF N +L R K L+ +A FG+AV+++NQV+
Sbjct: 216 -LLIIDSCTALYRTDF-NGRGELSARQAHLGKFLRTLQRLADEFGIAVVMSNQVM 268
>gi|367013438|ref|XP_003681219.1| hypothetical protein TDEL_0D04240 [Torulaspora delbrueckii]
gi|359748879|emb|CCE92008.1| hypothetical protein TDEL_0D04240 [Torulaspora delbrueckii]
Length = 461
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 12/176 (6%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
ID LGGGI + ITE+ ES +GK+Q +QL+L+ QLP GGL +Y+ TE P
Sbjct: 93 IDDALGGGIHTHGITEIFGESSTGKSQLLMQLSLAVQLPPKLGGLGGKCVYITTEGDLPT 152
Query: 87 RRLHQLSHTFRPSNDHNPC--DYIFVQSVHSV---DQLLDIMPKIESFIKNSSNSRLPIR 141
+RL ++ + RP N D IF S + + + +L++ I ++N + I+
Sbjct: 153 QRLQEMIAS-RPEFKENGVSQDNIFTVSCNDLVNQEHILNVQLPI--LLENHEGA---IK 206
Query: 142 LIVIDSIAALFRSDFDN-TMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
L++IDSI+ R + ++ + D + F +++ L +A LA++V NQV D
Sbjct: 207 LVIIDSISHHLRVELESKSFKDFQGNKFYIDQMAEGLLNLARKHLLAIVVANQVGD 262
>gi|448091818|ref|XP_004197422.1| Piso0_004675 [Millerozyma farinosa CBS 7064]
gi|448096395|ref|XP_004198453.1| Piso0_004675 [Millerozyma farinosa CBS 7064]
gi|359378844|emb|CCE85103.1| Piso0_004675 [Millerozyma farinosa CBS 7064]
gi|359379875|emb|CCE84072.1| Piso0_004675 [Millerozyma farinosa CBS 7064]
Length = 355
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 92/178 (51%), Gaps = 13/178 (7%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGG+ SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 114 TTGSKQLDTLLGGGVETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLYIDT 173
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVD---QLLDIMPKIESFIKNSSNSR 137
E F RL ++ + + D + D + ++ D QLL++ ++ + SR
Sbjct: 174 EGTFRPVRLVSIAQRYGLNPD-DCLDNVAYARAYNADHQFQLLNLAAQM------MAESR 226
Query: 138 LPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DSI +L+R+D+ +L R K L+ +A FG+AV++TNQVV
Sbjct: 227 FS--LLIVDSIMSLYRTDYSG-RGELSARQSHVAKYMRTLQRLADEFGIAVVITNQVV 281
>gi|257052349|ref|YP_003130182.1| DNA repair and recombination protein RadA [Halorhabdus utahensis
DSM 12940]
gi|256691112|gb|ACV11449.1| DNA repair and recombination protein RadA [Halorhabdus utahensis
DSM 12940]
Length = 348
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G +D LGGG+ SITE+ E G+GK+Q QL ++ QLP+ HGGL SS+++
Sbjct: 82 KLTWGVEEVDELLGGGVETQSITEVYGEFGAGKSQVTHQLAVNVQLPAEHGGLEGSSIFI 141
Query: 79 HTEFPFPMRRLHQLS--------------HTFRPSND-------------HNPCDYIFVQ 111
+E F R+ Q+ H + + D I V
Sbjct: 142 DSEDTFRPERIEQMVEGLEDDVIADTMVLHGVAEEGEADPADDDHFDDLIESILDKIHVA 201
Query: 112 SVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFF 171
+ + + + K + + P+RL+ +DS+ A FR+++ + ++ L
Sbjct: 202 KAFNSNHQILLAEKAQELASEGQDEEFPVRLLCVDSLTAHFRAEYVGRGELADRQQKLNK 261
Query: 172 KISGMLKAMAVGFGLAVLVTNQVV 195
+ +++ + AV+VTNQV
Sbjct: 262 HLHDLMRVGDLN-NTAVVVTNQVA 284
>gi|295669710|ref|XP_002795403.1| DNA repair protein RAD51 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285337|gb|EEH40903.1| DNA repair protein RAD51 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 348
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITE+ E +GK+Q C L ++ QLP GG L++ T
Sbjct: 104 TTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLFIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + + D I ++ D L ++ + + + S
Sbjct: 164 EGTFRPTRLLSVAQRYGLAGEE-VLDNIAYARAYNSDHQLQLLNQASQMMCETRFS---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 219 -LLIVDSATALYRTDFSG-RGELSNRQIHLAKFMRALRRLADEFGIAVVITNQVV 271
>gi|238497916|ref|XP_002380193.1| DNA repair protein (Rad57), putative [Aspergillus flavus NRRL3357]
gi|220693467|gb|EED49812.1| DNA repair protein (Rad57), putative [Aspergillus flavus NRRL3357]
Length = 585
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 97/173 (56%), Gaps = 5/173 (2%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGGIP +TE+ ESGSGKTQF L L L+ QLPS GL +++Y+ TE P
Sbjct: 133 LDELLGGGIPTGYVTEVTGESGSGKTQFLLSLLLAVQLPSPK-GLGKNAVYISTEAPLST 191
Query: 87 RRLHQLSHTFRPSNDHNPCDYI-FVQSVHSVDQL-LDIMPKIESFIKNSSNSRLPIRLIV 144
RL QL + P P D ++++ S++ + L+ I ++ + R + L+V
Sbjct: 192 PRLSQLIDS-NPYLSTLPRDRAPTLENILSINAMDLESQDHILNYQLPVAIQRYNVGLVV 250
Query: 145 IDSIAALFRSDF-DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
IDSI + +R++ + + L RS K+ ML+ +AV +A++V NQV D
Sbjct: 251 IDSITSNYRAEHTSHNILGLSTRSGELTKLGQMLRNLAVQEDIAIVVANQVSD 303
>gi|351726994|ref|NP_001238425.1| meiotic recombination protein DMC1 homolog [Glycine max]
gi|3219787|sp|Q96449.1|DMC1_SOYBN RecName: Full=Meiotic recombination protein DMC1 homolog
gi|1518157|gb|AAB07025.1| RecA/Rad51/DMC1-like protein [Glycine max]
Length = 345
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 120/282 (42%), Gaps = 52/282 (18%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D LGGG+ ++ITE E SGKTQ L +S QLP++ G + Y+
Sbjct: 108 RITTGSQALDELLGGGVETSAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYI 167
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLDIMPKIESFIKNSSN 135
TE F R+ ++ F + I+ ++ H + LL + K+
Sbjct: 168 DTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKM--------- 218
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
S P RL+++DS+ ALFR DF + ++ L +S ++K +A F +AV +TNQV+
Sbjct: 219 SEEPFRLLIVDSVIALFRVDFSGRGELADRQQKLAQMLSRLIK-IAEEFNVAVYMTNQVI 277
Query: 196 DLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVN 255
+P GV P PA G A+ RL + +
Sbjct: 278 S--DPGGGV------------FVTDPKKPAGGHVLAHAATVRLMFRKGK----------- 312
Query: 256 GGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
E +C+ V AP+L + F+IT G+
Sbjct: 313 -------GEQRICK-------VFDAPNLPEAEAVFQITAGGI 340
>gi|400601380|gb|EJP69023.1| putative RAD51 protein [Beauveria bassiana ARSEF 2860]
Length = 348
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI S+TEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 104 TTGSKNLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ F S + D + ++ D L ++ + + + + S
Sbjct: 164 EGTFRPVRLLSVANRFGLSGEE-VLDNVAYARAYNSDHQLQLLNQAAAMMCETRFS---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 219 -LLIVDSATALYRTDFCG-RGELSNRQTHLAKFMRTLQRLADEFGVAVVITNQVV 271
>gi|399216906|emb|CCF73593.1| unnamed protein product [Babesia microti strain RI]
Length = 333
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 45/279 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G ++D+ LGGGI +ITEL E+ +GKTQ C L ++AQLPSS G + ++
Sbjct: 95 KLTTGSSVLDQALGGGIETMAITELFGENRTGKTQLCHTLCVTAQLPSSMNGGNGKVCFI 154
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F ++ ++ + ++ + I + + ++ ++ S + + S
Sbjct: 155 DTEGTFRPEKIIRIGGRYNMDSEI-VLENILYARAFTHEHIITLLSTAASKMCEDNFS-- 211
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L++IDSI +LFR DF +L +R K+ L + F +A+L+TN V+
Sbjct: 212 ---LLIIDSIMSLFRVDFAGR-GELAERQQKLNKLLSGLSKLGEQFNIAILLTNHVIS-- 265
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
EP+ G + PI PA G + RL L +
Sbjct: 266 EPS-----------GAMSFVSNPIKPAGGHVLGHASTFRLALRK---------------- 298
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
G G + +C+ + +P L + C F++T GV
Sbjct: 299 -GKGDQR-ICK-------IYDSPSLPEVECIFQLTDSGV 328
>gi|147805615|emb|CAN71783.1| hypothetical protein VITISV_028799 [Vitis vinifera]
Length = 348
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 91/189 (48%), Gaps = 15/189 (7%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D LGGGI ++ITE E SGKTQ L +S QLP+S G + Y+
Sbjct: 107 RITTGSQALDELLGGGIETSAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYI 166
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLDIMPKIESFIKNSSN 135
TE F R+ ++ F + I+ ++ H + LL + K+
Sbjct: 167 DTEGTFRPDRIVPIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKM--------- 217
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
S P RL+++DS+ ALFR DF +L R ++ L +A F +AV +TNQV+
Sbjct: 218 SEEPFRLLIVDSVIALFRVDFTGR-GELADRQQKLAQMLSRLTKIAEEFNVAVYMTNQVI 276
Query: 196 DLMEPNEGV 204
+P GV
Sbjct: 277 --ADPGGGV 283
>gi|71028444|ref|XP_763865.1| DNA repair protein Rad51 [Theileria parva strain Muguga]
gi|68350819|gb|EAN31582.1| DNA repair protein rad51, putative [Theileria parva]
Length = 343
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 8 QNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSS 67
Q+ L+ K T G +D+ L GG+ SITE++ E +GK+Q C L ++ QLP
Sbjct: 93 QDYLEARGNLIKFTTGSAQLDKLLQGGVETGSITEIIGEFKTGKSQLCHTLAVTCQLPVE 152
Query: 68 HGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIE 127
G L++ +E F R+ ++ F S + D + ++ D L+++ +
Sbjct: 153 QSGGEGKCLWVDSEGTFRPERIVSIAKRFGLSPS-DCLDNVAYARAYNTDHQLELLVEAS 211
Query: 128 SFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLA 187
+ + + L+++DS +L+RSD+ +L R K L+ +A FG+A
Sbjct: 212 AMMAQTR-----FALLIVDSATSLYRSDYSG-RGELASRQMHLCKFLRALQRIADTFGVA 265
Query: 188 VLVTNQV---VDLMEPNEGVNGLRVG 210
V++TNQV VD M G + L VG
Sbjct: 266 VVITNQVVAKVDAMSTFFGNDKLPVG 291
>gi|146417037|ref|XP_001484488.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 333
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 11/177 (6%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 92 TTGSKQLDTLLGGGIETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLYIDT 151
Query: 81 EFPFPMRRLHQLSHTF--RPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F RL ++ + P + + Y + QLL++ ++ + SR
Sbjct: 152 EGTFRPVRLVLIAQRYGLNPDDCLDNVAYARAYNAEHQFQLLNMAAQM------MAESRF 205
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DSI +L+R+D+ +L R K L+ +A FG+AV++TNQVV
Sbjct: 206 S--LLIVDSIMSLYRTDYSG-RGELSARQAHVAKYMRTLQRLADEFGIAVVITNQVV 259
>gi|330919603|ref|XP_003298683.1| hypothetical protein PTT_09464 [Pyrenophora teres f. teres 0-1]
gi|311328005|gb|EFQ93221.1| hypothetical protein PTT_09464 [Pyrenophora teres f. teres 0-1]
Length = 348
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITE+ E +GK+Q C L ++ QLP GG +Y+ T
Sbjct: 101 TTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQLCHTLAVTCQLPFDMGGGEGKCIYIDT 160
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R +++ F S + D + ++ D L+++ + + + S
Sbjct: 161 EGTFRPVRCLAVANRFGLSGEE-VLDNVAYARAYNSDHQLELLNQAAQMMTETRFS---- 215
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS AL+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 216 -LLVVDSAMALYRTDFVG-RGELSARQTHLAKFMRTLQRLADEFGIAVIITNQVV 268
>gi|396462208|ref|XP_003835715.1| similar to DNA repair protein RAD51 homolog 1 [Leptosphaeria
maculans JN3]
gi|312212267|emb|CBX92350.1| similar to DNA repair protein RAD51 homolog 1 [Leptosphaeria
maculans JN3]
Length = 348
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 101 TTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 160
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R +++ F S + D + ++ D L+++ + + + S
Sbjct: 161 EGTFRPVRCLAVANRFGLSGEE-VLDNVAYARAYNSDHQLELLNQAAQMMTETRFS---- 215
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 216 -LLIVDSATSLYRTDFAG-RGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVV 268
>gi|407847641|gb|EKG03284.1| meiotic recombination protein DMC1, putative [Trypanosoma cruzi]
Length = 351
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 118/279 (42%), Gaps = 45/279 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ LGGGI SITE E +GKTQ L ++ QLP+S GG + +Y+
Sbjct: 113 RMTTGSTALDQLLGGGIESMSITEAFGEFRTGKTQIAHTLCVTCQLPTSMGGGNGKVIYV 172
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ ++ F D + I V ++ + + ++ + + +
Sbjct: 173 DTESTFRPERIKPIAARFGLDAD-AVLNNILVARAYTHEHQMHLLSMVAAKMAEDQ---- 227
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+V+DSI ALFR DF +L +R K+ L +A F +AV +TNQVV
Sbjct: 228 -FGLLVVDSITALFRVDFSG-RGELAERQQKLAKMMSHLIKLAEEFNVAVYITNQVV--- 282
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ G + V + P P G A+ +RL L +
Sbjct: 283 -ADPGGASMFVAD---------PKKPVGGHILAHASTTRLSLRKG--------------- 317
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
R +R + +P L + C F I+ +G+
Sbjct: 318 ----------RGDQRICKIYDSPSLPEVECVFSISEQGI 346
>gi|297737116|emb|CBI26317.3| unnamed protein product [Vitis vinifera]
Length = 348
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 91/189 (48%), Gaps = 15/189 (7%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D LGGGI ++ITE E SGKTQ L +S QLP+S G + Y+
Sbjct: 107 RITTGSQALDELLGGGIETSAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYI 166
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLDIMPKIESFIKNSSN 135
TE F R+ ++ F + I+ ++ H + LL + K+
Sbjct: 167 DTEGTFRPDRIVPIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKM--------- 217
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
S P RL+++DS+ ALFR DF +L R ++ L +A F +AV +TNQV+
Sbjct: 218 SEEPFRLLIVDSVIALFRVDFTGR-GELADRQQKLAQMLSRLTKIAEEFNVAVYMTNQVI 276
Query: 196 DLMEPNEGV 204
+P GV
Sbjct: 277 --ADPGGGV 283
>gi|225682824|gb|EEH21108.1| DNA repair protein RAD51 [Paracoccidioides brasiliensis Pb03]
gi|226290270|gb|EEH45754.1| DNA repair protein RAD51 [Paracoccidioides brasiliensis Pb18]
Length = 348
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 85/175 (48%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 104 TTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D I ++ D L ++ + + + S
Sbjct: 164 EGTFRPIRLLSVAQRYGLVGEE-VLDNIAYARAYNSDHQLQLLNQASQMMCETRFS---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 219 -LLIVDSATALYRTDFSG-RGELSNRQIHLAKFMRALRRLADEFGIAVVITNQVV 271
>gi|294460653|gb|ADE75901.1| unknown [Picea sitchensis]
Length = 346
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 127/318 (39%), Gaps = 64/318 (20%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+ T +LL T ++ C +D LGGGI +TE+ G GKTQ +QL +
Sbjct: 70 LAGAKTAWDLLCEEKTMKRIVTFCEDLDVILGGGICRKEVTEVGGVPGIGKTQLGIQLAI 129
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQL 119
+ Q+P GGL ++Y+ TE F + R+ Q++ PC V+ H+ ++
Sbjct: 130 NVQIPVDLGGLGGQAIYIDTEGSFMVERVCQIAKACIEKLKDIPCTSERKVEECHTKLKV 189
Query: 120 LDIMPKIESF--------------IKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKK 165
D + I F + R +++I++DS+ FR DF +DL
Sbjct: 190 DDFLSNIFYFRACNYTEQIAVINYMDKFIEERDKVKIIIVDSVTFHFRQDF----EDLAL 245
Query: 166 RSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGR-PICP 224
R+ L +S L +A + AV++ NQV +S G +
Sbjct: 246 RTRLLGGMSQKLMRLAEEYDTAVVLMNQVT------------------TKFSGGSFQLAL 287
Query: 225 ALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLA 284
ALG +W++ +R+ L N D R ++ +P L
Sbjct: 288 ALGESWSHACTNRVVLYWNGD--------------------------NRFGYIDKSPSLQ 321
Query: 285 DTSCEFEITREGVFGVER 302
S F IT G+ +ER
Sbjct: 322 SASAPFSITTGGICNLER 339
>gi|213405411|ref|XP_002173477.1| RecA family ATPase Dmc1 [Schizosaccharomyces japonicus yFS275]
gi|212001524|gb|EEB07184.1| RecA family ATPase Dmc1 [Schizosaccharomyces japonicus yFS275]
Length = 332
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 6/174 (3%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
+ G D LGGG+ SITE+ E GKTQ L ++AQLP GG ++ T
Sbjct: 96 STGSKAFDAMLGGGVQSMSITEVFGEFRCGKTQMSHTLCVTAQLPREMGGAEGKVAFIDT 155
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R+ ++ F D + I V ++ +Q +D + K+ +
Sbjct: 156 EGTFRPDRIRAIAERFGVDADQ-AMENIIVSRAYNSEQQMDYITKLATIFAEDGR----Y 210
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
RL+++DSI ALFR DF +L +R + L ++ F +AV VTNQV
Sbjct: 211 RLLIVDSIMALFRVDFSGR-GELSERQQKLNIMLARLNHISEEFNVAVFVTNQV 263
>gi|194765033|ref|XP_001964632.1| GF23286 [Drosophila ananassae]
gi|190614904|gb|EDV30428.1| GF23286 [Drosophila ananassae]
Length = 234
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 108/235 (45%), Gaps = 38/235 (16%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K G +D GGGI ITEL+ SG+GKTQ CL L L+ Q+P + GGL S+L++
Sbjct: 7 KICTGIKGVDENYGGGISLGHITELIGNSGTGKTQMCLNLCLNVQIPKTAGGLEGSALFI 66
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDY--------IFVQSVHSVDQLLDIMPKIESFI 130
T F RL QL+ H D+ ++ S QL+ + +
Sbjct: 67 DTRQDFNPHRLLQLATELERQYAHKVPDFKALKMLKNVYYVRCSSEAQLMASVLSCHRHL 126
Query: 131 KNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSF-LFFKISGMLKAMAVGFGLAVL 189
+N N I+LIVIDS++ F M + K + F L ++ ++ + + +A +
Sbjct: 127 ENHKN----IKLIVIDSLS------FTLQMIENKSKMFELLLELHESMRNLQRTYKVAWV 176
Query: 190 VTNQVVDLMEPNEGVNGLRVGNLGCLYSSGR-PICPALGIAWANCVNSRLFLSRN 243
+TN V RV S G+ + PALG ++ +N R++ SR+
Sbjct: 177 ITN-----------VLTYRV-------SKGQFHLVPALGDLHSHLINERIWFSRS 213
>gi|300709641|ref|YP_003735455.1| DNA repair and recombination protein RadA [Halalkalicoccus jeotgali
B3]
gi|448297588|ref|ZP_21487634.1| DNA repair and recombination protein RadA [Halalkalicoccus jeotgali
B3]
gi|299123324|gb|ADJ13663.1| DNA repair and recombination protein RadA [Halalkalicoccus jeotgali
B3]
gi|445579897|gb|ELY34290.1| DNA repair and recombination protein RadA [Halalkalicoccus jeotgali
B3]
Length = 344
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 24/200 (12%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K + P +D LGGG+ SITE+ E G+GK+Q QL ++ QLP GGL S++++
Sbjct: 82 KLSWQIPEVDEMLGGGVETQSITEVYGEFGAGKSQVTHQLAVNVQLPREQGGLEGSAIFI 141
Query: 79 HTEFPFPMRRLHQLSHTFR----------------PSND-------HNPCDYIFVQSVHS 115
+E F R+ + P+++ + D I V +
Sbjct: 142 DSEDTFRPERIDDMVRGLEDDVIAATLEHREIEGGPNDEAALDVLVEDVLDKIHVAKAFN 201
Query: 116 VDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISG 175
+ + + K + S ++ P+RL+ +DS+ A FR+++ L +R K
Sbjct: 202 SNHQMLLAEKAKELAGESEDTEWPVRLVCVDSLTAHFRAEYVG-RGQLAERQQKLNKHLH 260
Query: 176 MLKAMAVGFGLAVLVTNQVV 195
L +A + A+LVTNQV
Sbjct: 261 DLSRIADLYNTAILVTNQVA 280
>gi|16903198|gb|AAL27842.1| RAD51C protein [Chlamydomonas reinhardtii]
Length = 352
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 117/300 (39%), Gaps = 73/300 (24%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGG+ +TE G GKTQ +QL ++ Q+P S G ++Y+ TE F
Sbjct: 100 LDALLGGGVAAGQVTEFCGVPGVGKTQLGMQLAVNVQIPRSLSGPEGQAVYIDTEGSFMA 159
Query: 87 RRLHQLSHTF------------------------RPSNDHNPCDYIFVQSVHSVDQLLDI 122
R ++ RP N I++ VH + L +
Sbjct: 160 ERCADIAEGAVRHVQSILEKKASMGQPELLHDGERPFTLENVMRGIYLFRVHDHVEQLGL 219
Query: 123 MPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAV 182
+ + F++ S +RLIVIDS+ FR DF D+ +R+ + ++ L ++A
Sbjct: 220 VNMLPRFLEQYSQ----VRLIVIDSVTFHFRQDF----PDMAQRTRVVTGMAQQLISLAQ 271
Query: 183 GFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+AV++ NQV L G + PALG +W + ++R+ L+
Sbjct: 272 THNVAVVLMNQV----------------TTKVLEGGGSKLVPALGESWGHAASTRVMLTW 315
Query: 243 NEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVER 302
D R ++ +PHL F +T +G+ + R
Sbjct: 316 GPD-------------------------NERHAQMIKSPHLPLGDAAFAVTADGLRSLPR 350
>gi|359477566|ref|XP_002279369.2| PREDICTED: LOW QUALITY PROTEIN: meiotic recombination protein DMC1
homolog [Vitis vinifera]
Length = 361
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 91/189 (48%), Gaps = 15/189 (7%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D LGGGI ++ITE E SGKTQ L +S QLP+S G + Y+
Sbjct: 107 RITTGSQALDELLGGGIETSAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYI 166
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLDIMPKIESFIKNSSN 135
TE F R+ ++ F + I+ ++ H + LL + K+
Sbjct: 167 DTEGTFRPDRIVPIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKM--------- 217
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
S P RL+++DS+ ALFR DF +L R ++ L +A F +AV +TNQV+
Sbjct: 218 SEEPFRLLIVDSVIALFRVDFTGR-GELADRQQKLAQMLSRLTKIAEEFNVAVYMTNQVI 276
Query: 196 DLMEPNEGV 204
+P GV
Sbjct: 277 --ADPGGGV 283
>gi|219119366|ref|XP_002180445.1| Rad51 DNA recombination/repair protein [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217407918|gb|EEC47853.1| Rad51 DNA recombination/repair protein [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 350
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T + L++ T G +D+ L GG+ SITE+ E +GKTQ C L ++ Q+
Sbjct: 100 TAADALEDRKALVTLTTGSIELDKLLEGGVETGSITEVFGEFRTGKTQLCHTLCVTCQMA 159
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTF--RPSNDHNPCDYIFVQSVHSVDQLLDIM 123
+ GG ++Y+ TE F RL ++ F P+ Y + +LL +
Sbjct: 160 VTEGGAEGKAIYIDTEGTFRPNRLQAIAERFGLDPTVALENVAYARAHNSEHQAELLKLA 219
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
I S + + L+V+DS ALFR+D+ +L +R + L +A
Sbjct: 220 AAIMSQDRYA--------LLVVDSATALFRTDYTG-RGELSERQMQMAQFLRQLTRLAEE 270
Query: 184 FGLAVLVTNQVV 195
FG+AV +TNQVV
Sbjct: 271 FGVAVFITNQVV 282
>gi|212542819|ref|XP_002151564.1| DNA repair protein RAD51, putative [Talaromyces marneffei ATCC
18224]
gi|111380646|gb|ABH09700.1| RAD51-like protein [Talaromyces marneffei]
gi|210066471|gb|EEA20564.1| DNA repair protein RAD51, putative [Talaromyces marneffei ATCC
18224]
Length = 349
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 105 TTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQLCHTLAVTCQLPFDMGGGEGKCLYIDT 164
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D L ++ + + + S
Sbjct: 165 EGTFRPVRLLAVAQRYGLVGEE-VLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 219
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF N +L R K L+ +A FG+AV++TNQVV
Sbjct: 220 -LLIVDSATALYRTDF-NGRGELSNRQTHLAKFLRTLQRLADEFGIAVVITNQVV 272
>gi|219127959|ref|XP_002184192.1| Rad51 DNA recombination/repair protein [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217404423|gb|EEC44370.1| Rad51 DNA recombination/repair protein [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 456
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 117/266 (43%), Gaps = 61/266 (22%)
Query: 23 GCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEF 82
G +D+ L GG+ +ITELV +G GKTQ +QL + A + +Y+ TE
Sbjct: 163 GLEPLDQALRGGVRVGTITELVGPAGVGKTQLAMQLCIMA------SRYAQGCVYVDTEK 216
Query: 83 PFPMRRLHQL----SHTFRPSNDHN----PCDYIFVQS---------------------- 112
+ RL ++ S +N H P D V+S
Sbjct: 217 KLSVARLREIALQRSSRVPDTNTHGEFLYPSDTTLVESTVDISATSRNCFRSPQEVLDNV 276
Query: 113 -VHS---VDQLLDIMPKIES--FIKN-----SSNSRLPIRLIVIDSIAALFRSDFDNTMD 161
VHS +D+L + ++E F +N SSN++ P+RL+V+DSIAA R DF
Sbjct: 277 TVHSPSNIDELFGALSEVEDELFSRNHQSVGSSNAKFPVRLLVLDSIAAPARRDFG--AG 334
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRP 221
+ + KI+ LK +A L V+V NQV + +G + +G
Sbjct: 335 SAPELASTVIKIAQTLKRLADQHHLVVVVINQVGSSI----------LGTDAVIDQTG-- 382
Query: 222 ICPALGIAWANCVNSRLFLSRNEDFV 247
I PALG +W +CV++R+ D V
Sbjct: 383 IRPALGTSWHHCVSTRVLFEFEADLV 408
>gi|82617212|emb|CAI64118.1| DNA repair and recombination protein [uncultured archaeon]
gi|268322944|emb|CBH36532.1| DNA repair and recombination protein radA [uncultured archaeon]
Length = 315
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G T +L+ K T G +D +GGG+ ++TE E GSGKTQ QL +
Sbjct: 60 IGGFETGDKILERRHNIGKLTTGSKSLDDLIGGGLETQALTEFYGEFGSGKTQIAHQLAV 119
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLL 120
+ QLP GGL S++ + TE F R+ +S + + +S +S Q+L
Sbjct: 120 NVQLPPEKGGLDGSAIIIDTENTFRPDRIKDMSEGAELDYNDILKNIHVARSYNSNHQIL 179
Query: 121 DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLK 178
++ K + + + P+RL++IDS A FRS++ T+ D ++ KI+ L
Sbjct: 180 -LVEKAGALAEELKATEKPVRLMIIDSATAQFRSEYVGRGTLADRQQ------KINRHLH 232
Query: 179 AMAVGFG----LAVLVTNQVV 195
A+ FG V++TNQV+
Sbjct: 233 D-ALKFGDLNNAVVMITNQVM 252
>gi|449432271|ref|XP_004133923.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Cucumis
sativus]
gi|449480051|ref|XP_004155785.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Cucumis
sativus]
Length = 346
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 118/259 (45%), Gaps = 44/259 (16%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T ++L + T C +D LGGGI + +TE+ G GKTQ +QL ++ Q+P
Sbjct: 74 TAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKTQLGIQLAVNVQIP 133
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHT-FRPSNDHN---------------PCDY-- 107
+ GG+ ++Y+ TE F + R Q++ +D++ P D
Sbjct: 134 GAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQIEPKDILE 193
Query: 108 -IFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKR 166
IF V S + + ++ ++ FI + ++++++DS+ FR +F DDL R
Sbjct: 194 NIFYFRVCSYTEQIALINYLDKFITEHKD----VKVVIVDSVTFHFRQNF----DDLALR 245
Query: 167 SFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPAL 226
+ L +++ +A F LAV++ NQV + EG L + AL
Sbjct: 246 TRLLSEMALKFMKLAKKFSLAVVLFNQVT--TKFAEGSFQLTL---------------AL 288
Query: 227 GIAWANCVNSRLFLSRNED 245
G +W++ +R+ L N D
Sbjct: 289 GDSWSHSCTNRIILYWNGD 307
>gi|449480344|ref|XP_002196350.2| PREDICTED: DNA repair protein RAD51 homolog 3 [Taeniopygia guttata]
Length = 521
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 102/237 (43%), Gaps = 45/237 (18%)
Query: 24 CPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFP 83
C +D LGGG+ ITE+ G GKTQ C+QL + Q+P GG++ ++++ TE
Sbjct: 248 CSALDNILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQIPECFGGIAGEAVFIDTEGS 307
Query: 84 FPMRRLHQLSHT----------FRPSNDH----------NPCDYIFVQSVHSVDQLLDIM 123
F + R+ ++ + DH N +I+ +LL +
Sbjct: 308 FMVDRVVDIAAACVQHCHLIAEAQQEEDHQKALETFSLENILSHIYYFRCRDYTELLAQV 367
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
+ F+ S +RL+VID IA FR DF +DL R+ L ++ L +A
Sbjct: 368 YLLPEFLSEHSK----VRLVVIDGIAFPFRHDF----EDLSLRTRLLNGLAQQLIIIAND 419
Query: 184 FGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
AV++TNQ+ R+G S + PALG +W + RL
Sbjct: 420 HRAAVVLTNQMT-----------TRIGQ------SQSTLVPALGESWGHAATVRLIF 459
>gi|242767957|ref|XP_002341472.1| DNA repair protein RAD51, putative [Talaromyces stipitatus ATCC
10500]
gi|218724668|gb|EED24085.1| DNA repair protein RAD51, putative [Talaromyces stipitatus ATCC
10500]
Length = 349
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 105 TTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQLCHTLAVTCQLPFDMGGGEGKCLYIDT 164
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D L ++ + + + S
Sbjct: 165 EGTFRPVRLLAVAQRYGLVGEE-VLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 219
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF N +L R K L+ +A FG+AV++TNQVV
Sbjct: 220 -LLIVDSATALYRTDF-NGRGELSNRQTHLAKFLRTLQRLADEFGIAVVITNQVV 272
>gi|261194837|ref|XP_002623823.1| DNA repair protein RAD51 [Ajellomyces dermatitidis SLH14081]
gi|239588361|gb|EEQ71004.1| DNA repair protein RAD51 [Ajellomyces dermatitidis SLH14081]
gi|239613363|gb|EEQ90350.1| DNA repair protein RAD51 [Ajellomyces dermatitidis ER-3]
gi|327351860|gb|EGE80717.1| DNA repair protein RAD51 [Ajellomyces dermatitidis ATCC 18188]
Length = 348
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 85/175 (48%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 104 TTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D I ++ D L ++ + + + S
Sbjct: 164 EGTFRPVRLLAVAQRYGLVGEE-VLDNIAYARAYNSDHQLQLLNQASQMMCETRFS---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 219 -LLIVDSATALYRTDFSG-RGELANRQNHLAKFMRKLRTLADEFGIAVVITNQVV 271
>gi|449432658|ref|XP_004134116.1| PREDICTED: meiotic recombination protein DMC1 homolog [Cucumis
sativus]
gi|449504138|ref|XP_004162263.1| PREDICTED: meiotic recombination protein DMC1 homolog [Cucumis
sativus]
Length = 345
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 120/282 (42%), Gaps = 52/282 (18%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D LGGGI +ITE E SGKTQ L +S QLP+S G + Y+
Sbjct: 108 RITTGSQALDELLGGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYI 167
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLDIMPKIESFIKNSSN 135
TE F R+ ++ F + I+ ++ H + LL + K+
Sbjct: 168 DTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKM--------- 218
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
S P +L+++DSI ALFR DF +L +R ++ L +A F +AV +TNQVV
Sbjct: 219 SEEPFKLLIVDSIIALFRVDFTGR-GELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVV 277
Query: 196 DLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVN 255
+P GV + S P PA G A+ RL + +
Sbjct: 278 --ADPGGGV-----------FVS-DPKKPAGGHVLAHAATVRLMFRKGK----------- 312
Query: 256 GGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
E +C+ V AP+L ++ F+IT G+
Sbjct: 313 -------GEQRICK-------VFDAPNLPESEAVFQITPGGI 340
>gi|340376025|ref|XP_003386534.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Amphimedon
queenslandica]
Length = 345
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 105/224 (46%), Gaps = 19/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D L GGI SITE+ E +GKTQ C L ++ QLP +GG LY+
Sbjct: 106 QITTGSKELDTLLKGGIETGSITEIFGEFRTGKTQLCHMLAVTCQLPIDNGGGEGKCLYI 165
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
+E F RL ++ + S + D + ++ D ++ + + + S +R
Sbjct: 166 DSEGTFRPERLLAVAERYNLSG-ADVLDNVAYARAYNTDHQSQLLLQAAAMM---SETRY 221
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+V+DS AL+R+D+ +L R + L ++ FG+AV++TNQVV
Sbjct: 222 A--LLVVDSATALYRTDYSG-RGELSARQMHLARFLRTLLRLSDEFGVAVVITNQVV--- 275
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+V ++S+ P P G A+ +RL+L +
Sbjct: 276 --------AQVDGAAAMFSAD-PKKPIGGNIIAHASTTRLYLRK 310
>gi|125578475|gb|EAZ19621.1| hypothetical protein OsJ_35197 [Oryza sativa Japonica Group]
Length = 348
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 13/194 (6%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T +LL + + T G +D+ LGGGI ITE E SGKTQ L +SAQL
Sbjct: 93 ITGSDLLIKRKSVVRITTGSQALDKLLGGGIETLCITEAFGEFRSGKTQLAHTLCVSAQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 153 PIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P RL+++DS+ ALFR DF +L +R ++ L +A
Sbjct: 213 LAAKM---------AEEPFRLLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIA 262
Query: 182 VGFGLAVLVTNQVV 195
F +AV +TNQV+
Sbjct: 263 EEFNVAVYITNQVI 276
>gi|52550007|gb|AAU83856.1| recombinase [uncultured archaeon GZfos34G5]
Length = 315
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 1/156 (0%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G T +L L K T G D LGGG+ ++TE E GSGKTQ Q+ +
Sbjct: 60 IGGFETGDKILGRRLEIGKLTTGSTSFDDLLGGGLETQALTEFYGEFGSGKTQIAHQIAV 119
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLL 120
+ QLP +GGL+ S + + TE F R+ ++ D + ++ +S Q+L
Sbjct: 120 NVQLPPENGGLNGSVIIIDTENTFRPERIKDMAEGASLDPDEILKNIHVARAYNSNHQIL 179
Query: 121 DIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDF 156
++ K E + ++ P+RL+++DS A FRS++
Sbjct: 180 -LVDKAERLAEELIDTEKPVRLLIVDSATAHFRSEY 214
>gi|435852388|ref|YP_007313974.1| DNA repair and recombination protein RadA [Methanomethylovorans
hollandica DSM 15978]
gi|433663018|gb|AGB50444.1| DNA repair and recombination protein RadA [Methanomethylovorans
hollandica DSM 15978]
Length = 325
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K + GC + +GGGI +ITE+ E GSGKTQ QL ++ QLP GGL+ S + +
Sbjct: 81 KLSTGCKEFNDIMGGGIDSQAITEVYGEFGSGKTQLGHQLAVNVQLPQEKGGLNGSVIMI 140
Query: 79 HTEFPFPMRRLHQ----LSHTFRPSNDHNP-CDYIFVQSVHSVDQLLDIMPKIESFIKNS 133
TE F R+ Q LS + D+ +I V ++ + + ++
Sbjct: 141 DTENTFRPERIKQMVDGLSELYGEDYDYEEFLKHIHVARAYNSNHQILLVDAASELANQL 200
Query: 134 SNSRLPIRLIVIDSIAALFRSDF 156
+S P+RL+++DS+ A FR+++
Sbjct: 201 KDSDKPVRLLIVDSLTAHFRAEY 223
>gi|21805940|gb|AAM76791.1| Dmc1 protein type A [Oryza sativa Japonica Group]
Length = 344
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 125/297 (42%), Gaps = 52/297 (17%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T +LL + + T G +D LGGGI ITE E SGKTQ L +SAQL
Sbjct: 93 ITGSDLLIKRKSVVRITTGSQALDELLGGGIETLCITEAFGEFRSGKTQLAHTLCVSAQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 153 PIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P RL+++DS+ ALFR DF +L +R ++ L +A
Sbjct: 213 LAAKM---------AEEPFRLLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIA 262
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F +AV +TNQV+ +P G+ + +L PA G A+ RL L
Sbjct: 263 EEFNVAVYITNQVI--ADPG---GGMFITDLK---------KPAGGHVLAHAATIRLMLR 308
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
+ + E VC+ + AP+L + F++T G+
Sbjct: 309 KGK------------------GEQRVCK-------IFDAPNLPEGEAVFQVTSGGIM 340
>gi|340992754|gb|EGS23309.1| hypothetical protein CTHT_0009770 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 354
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 7/179 (3%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI S+TE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 108 TTGSKNLDNLLAGGIETGSVTEIFGEFRTGKSQICHTLAVTCQLPFEMGGGEGKCLYIDT 167
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ + S + D + ++ D L ++ + + + + S
Sbjct: 168 EGTFRPVRLLAVANRYGLSGEE-VLDNVAYARAYNCDHQLQLLNQAAAMMCETRFS---- 222
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV ++
Sbjct: 223 -LVIVDSATALYRTDFVG-RGELSSRQTHLAKFMRTLQRLADEFGVAVVITNQVVSQVD 279
>gi|408381004|ref|ZP_11178554.1| DNA repair and recombination protein RadA [Methanobacterium
formicicum DSM 3637]
gi|407816269|gb|EKF86831.1| DNA repair and recombination protein RadA [Methanobacterium
formicicum DSM 3637]
Length = 311
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 88/172 (51%), Gaps = 6/172 (3%)
Query: 23 GCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEF 82
G +D +GGGI +ITE+ E GSGK+Q ++ ++ QLP GGL +++ TE
Sbjct: 82 GSTGLDELIGGGIETQAITEVFGEFGSGKSQISHEIAVTVQLPPEKGGLCGECVFIDTEN 141
Query: 83 PFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRL 142
F R+ Q++ F D ++ +S Q+L + K+ I+ N IRL
Sbjct: 142 TFRPERIKQIAEGFTLDVDEVLGKIHIARAFNSSHQIL-MADKVNELIQKGVN----IRL 196
Query: 143 IVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+++DS+ + FR+++ + L R + L+ +A + +AV VTNQV
Sbjct: 197 VIVDSLTSHFRAEYVG-RESLATRQQKLNQHLHTLQNIANTYNVAVFVTNQV 247
>gi|403224170|dbj|BAM42300.1| DNA repair protein Rad51 [Theileria orientalis strain Shintoku]
Length = 343
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 10/195 (5%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G D L GGI SITE++ E +GK+Q C L ++ QLP G L++
Sbjct: 104 KFTTGSVQFDTLLQGGIETGSITEVIGEFKTGKSQLCHTLAVTCQLPVEQSGGEGKCLWI 163
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
+E F R+ ++ F S + D + ++ D L+++ + + + S+
Sbjct: 164 DSEGTFRPERIVSIAKRFGLSPS-DCLDNVAYARAYNTDHQLELLVEATAMM-----SQT 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV---V 195
L+++DS AL+RSD+ +L R K L+ +A FG+AV++TNQV V
Sbjct: 218 RFALLIVDSATALYRSDYSG-RGELASRQMHLCKFLRALQRIADTFGVAVVITNQVIAKV 276
Query: 196 DLMEPNEGVNGLRVG 210
D M G + L VG
Sbjct: 277 DAMSSFFGNDKLPVG 291
>gi|303284847|ref|XP_003061714.1| DMC1 DNA recombinase [Micromonas pusilla CCMP1545]
gi|226457044|gb|EEH54344.1| DMC1 DNA recombinase [Micromonas pusilla CCMP1545]
Length = 371
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 115/281 (40%), Gaps = 45/281 (16%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G ID L GG P +TE+ E +GKTQ C L ++ QLP + GG A ++ T
Sbjct: 135 TSGAETIDNVLKGGFPTRCLTEIYGEWRTGKTQICHTLAVTTQLPLNEGGGCAKVAWIDT 194
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R+ +++ F + D I V + + + + + + + S P
Sbjct: 195 EGTFRPDRIEKIAERFN-LDAEAVLDNILVAKTFTHEMMTNCLVALAARF-----SEEPF 248
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
+L++IDSI A FR DF +L +R + L+ +A F +AV+ TNQV +P
Sbjct: 249 KLLIIDSIMAHFRVDFTG-RGELSERQQKLGQFCSKLQKIADEFNIAVVYTNQV--QADP 305
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGG 260
+ G ++ P G A+ RL + +
Sbjct: 306 S-----------GMSFAGMDPKKAIGGHVLAHASTIRLSVRKG----------------- 337
Query: 261 SGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
R R L VV AP+L + EF IT GV +
Sbjct: 338 --------RGDNRILKVVDAPNLKEADAEFTITDGGVVAAD 370
>gi|77553662|gb|ABA96458.1| Meiotic recombination protein DMC1, putative, expressed [Oryza
sativa Japonica Group]
Length = 442
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 13/194 (6%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T +LL + + T G +D+ LGGGI ITE E SGKTQ L +SAQL
Sbjct: 93 ITGSDLLIKRKSVVRITTGSQALDKLLGGGIETLCITEAFGEFRSGKTQLAHTLCVSAQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 153 PIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P RL+++DS+ ALFR DF +L +R ++ L +A
Sbjct: 213 LAAKM---------AEEPFRLLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIA 262
Query: 182 VGFGLAVLVTNQVV 195
F +AV +TNQV+
Sbjct: 263 EEFNVAVYITNQVI 276
>gi|84996361|ref|XP_952902.1| DNA repair (Rad51 homologue) protein [Theileria annulata strain
Ankara]
gi|65303899|emb|CAI76278.1| DNA repair (Rad51 homologue) protein, putative [Theileria annulata]
Length = 369
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 7/188 (3%)
Query: 8 QNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSS 67
Q+ L+ K T G +D+ L GG+ SITE++ E +GK+Q C L ++ QLP
Sbjct: 93 QDYLEARGNLIKFTTGSSQLDKLLQGGVETGSITEIIGEFKTGKSQLCHTLAVTCQLPVE 152
Query: 68 HGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIE 127
G L++ +E F R+ ++ F S + D + ++ D L+++ +
Sbjct: 153 QSGGEGKCLWVDSEGTFRPERIVSIAKRFGLSPS-DCLDNVAYARAYNTDHQLELLVEAS 211
Query: 128 SFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLA 187
+ + + L+++DS +L+RSD+ +L R K L+ +A FG+A
Sbjct: 212 AMMAQTR-----FALLIVDSATSLYRSDYSGR-GELASRQMHLCKFLRALQRIADTFGVA 265
Query: 188 VLVTNQVV 195
V++TNQVV
Sbjct: 266 VVITNQVV 273
>gi|170068519|ref|XP_001868898.1| RAD51C protein [Culex quinquefasciatus]
gi|167864512|gb|EDS27895.1| RAD51C protein [Culex quinquefasciatus]
Length = 275
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 105/240 (43%), Gaps = 44/240 (18%)
Query: 24 CPIIDRCLGG-GIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEF 82
C +D +G G+ ITE GSGKTQ CLQL ++A LP GGL SLYL T F
Sbjct: 23 CKDLDHAIGHPGVSVGLITEFCGPPGSGKTQMCLQLCVNANLPKELGGLGGKSLYLDTNF 82
Query: 83 PFPMRRLHQLS-----------HTFRPS--------NDHNPCDYIFVQSVHSVDQLLDIM 123
F RL +++ T RP + + + VH + L +
Sbjct: 83 GFSPDRLREIATACVQHCQRIVRTSRPQLAEVTSKFTAESVMESVLYNHVHVCNDLNKSI 142
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
+E +K IRL+VIDS + L R + +NT++ ++ + + L+ +A
Sbjct: 143 DTLERLLKLGEK----IRLVVIDSYSFLIRCNIENTLERIR----IDHTVLNRLQILAQQ 194
Query: 184 FGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRN 243
F A+++TN V + NG + I PALG + + +N R+ L +
Sbjct: 195 FKFAIVLTNDVTTKL------NG----------TDPSTIAPALGDSHGHRINQRIVLGQT 238
>gi|345570489|gb|EGX53310.1| hypothetical protein AOL_s00006g176 [Arthrobotrys oligospora ATCC
24927]
Length = 406
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 84/175 (48%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 163 TTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQLCHTLAVTCQLPLDMGGGEGKCLYIDT 222
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N D + ++ D L ++ + + S
Sbjct: 223 EGTFRPVRLLAVAQRYG-LNGEEVLDNVAYARAYNSDHQLQLLNMAAQMMTETRFS---- 277
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+DF DL R + L+ +A FG+AV++TNQVV
Sbjct: 278 -LLIVDSATSLYRTDFSG-RGDLSARQMHLARFMRQLQRLADEFGIAVVITNQVV 330
>gi|91078458|ref|XP_967492.1| PREDICTED: similar to Dmc1 homolog [Tribolium castaneum]
gi|270004852|gb|EFA01300.1| DMC1/LIM15 [Tribolium castaneum]
Length = 356
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 111/226 (49%), Gaps = 21/226 (9%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSH--GGLSASSL 76
K + G +D+ LGGG+ SIT++ E+GSGKTQ L ++ Q+P+ GG +
Sbjct: 112 KISTGSANLDKLLGGGVESMSITQVFGEAGSGKTQIAHTLCVTTQIPTEDYSGG---KVM 168
Query: 77 YLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNS 136
++ TE F R+ Q++ F S D + +++++ +S Q + F +++
Sbjct: 169 FIDTERSFRPNRIRQIARRFHLSEDSVLQNILYIRAYNSEHQYQILKNVAVKFHEDTG-- 226
Query: 137 RLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
+L+++DSI ALFR+DF L ++ L +S +LK ++ + +AV +TNQV
Sbjct: 227 --VFKLLIVDSIIALFRNDFMGRGVLLNRQQKLAETMS-LLKKISEEYNVAVFITNQVTT 283
Query: 197 LMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
M N L + G + P G A+ +R+ L +
Sbjct: 284 SM-----------NNKFPLLTIGDDVKPVGGNILAHSSTTRVALRK 318
>gi|322698012|gb|EFY89786.1| DNA repair protein RAD51 [Metarhizium acridum CQMa 102]
Length = 348
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI S+TEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 104 TTGSKNLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ F S + D + ++ D L ++ + + + + S
Sbjct: 164 EGTFRPVRLLAVANRFGLSGEE-VLDNVAYARAYNSDHQLQLLNQAAAMMCETRFS---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS +L+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 219 -LLVVDSATSLYRTDFCG-RGELSNRQTHLAKFMRTLQRLADEFGIAVVITNQVV 271
>gi|401412279|ref|XP_003885587.1| putative meiotic recombination protein DMC1-like protein [Neospora
caninum Liverpool]
gi|325120006|emb|CBZ55559.1| putative meiotic recombination protein DMC1-like protein [Neospora
caninum Liverpool]
Length = 349
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 119/282 (42%), Gaps = 45/282 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G +D+ LGGG SITEL E+ GKTQ C + ++AQLP G Y+
Sbjct: 111 KITTGSDQLDQLLGGGFETMSITELFGENRCGKTQICHTVCVTAQLPRDMKGGCGKVCYI 170
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F ++ ++ F D D I + + + ++ I +
Sbjct: 171 DTEGTFRPEKIQGIAERFGLDGD-GVLDNIMYARAFTTEHMYQLLT-----IAAAKMCEE 224
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
++++DSI ALFR DF + ++ L +S M+K +A + LAVL+TNQV +
Sbjct: 225 RFSVLIVDSIIALFRVDFSGRGELADRQQKLNKMLSVMMK-LAEQYNLAVLLTNQV--MS 281
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+P G L + P P G + +RL + +
Sbjct: 282 DPGGG-----------LTFTANPTKPVGGHVLGHASTTRLSMRK---------------- 314
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
G G + R + V AP+L ++ C +++ +GV V
Sbjct: 315 -GKGDQ--------RIVKVYDAPNLPESECIIQLSSKGVIDV 347
>gi|254577177|ref|XP_002494575.1| ZYRO0A04708p [Zygosaccharomyces rouxii]
gi|238937464|emb|CAR25642.1| ZYRO0A04708p [Zygosaccharomyces rouxii]
Length = 463
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 97/203 (47%), Gaps = 25/203 (12%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+ P + ++ P+ VG ID LGGGI + ITE+ ES +GK+Q +QL LS QL
Sbjct: 75 VKPISEVEGPVPFTTTDVG---IDEALGGGIYTHGITEVFGESSTGKSQLLMQLCLSVQL 131
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQL--------SHTFRPSNDHNP--CDYIFVQSVH 114
P++ GG+ +Y+ TE P +RL + H N + CD I
Sbjct: 132 PTNMGGIKGKCVYISTEGDLPTQRLASMISAREELVKHGVSQENVYTVTCCDLI------ 185
Query: 115 SVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDF-DNTMDDLKKRSFLFFKI 173
+ D +L++ I NSR I+LI+IDSI+ R + D + F ++
Sbjct: 186 NQDHILNVQLPIL-----LENSRGAIKLIIIDSISHHMRVELPTRDFKDHQDNRFYVDQV 240
Query: 174 SGMLKAMAVGFGLAVLVTNQVVD 196
+ L +A LAV+V NQV D
Sbjct: 241 AERLLDLANKHALAVVVANQVSD 263
>gi|407926755|gb|EKG19715.1| DNA recombination and repair protein Rad51 [Macrophomina phaseolina
MS6]
Length = 521
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 98/184 (53%), Gaps = 21/184 (11%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GG+P +TE+ ESG+GKTQF L L L+AQLP H GLS S+LY+ TE P
Sbjct: 98 LDAELAGGLPAGYLTEITGESGAGKTQFLLTLLLAAQLPPPH-GLSKSALYISTEAPLAT 156
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIR----- 141
RL QL H + + S+ ++L I + + +LP+
Sbjct: 157 TRLTQL------LQQHPRLSSLPASTKPSLQRILSIQTPDLEYQDHVLRYQLPVAIARHD 210
Query: 142 --LIVIDSIAALFRSDFDNTMDD-------LKKRSFLFFKISGMLKAMAVGFGLAVLVTN 192
L+V+DS+AA +R++F+ D + +RS + ++ +L+++A G+AV+V N
Sbjct: 211 VGLVVLDSVAANYRAEFERPEHDRRAGVEAMARRSAMLVELGALLRSVARAHGVAVVVAN 270
Query: 193 QVVD 196
QV D
Sbjct: 271 QVSD 274
>gi|346320802|gb|EGX90402.1| DNA repair protein RAD51 [Cordyceps militaris CM01]
Length = 348
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI S+TEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 104 TTGSKNLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F S + D + ++ D L ++ + + + + S
Sbjct: 164 EGTFRPVRLLATANRFGLSGEE-VLDNVAYARAYNSDHQLQLLNQAATMMCETRFS---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 219 -LLIVDSATALYRTDFCG-RGELSNRQTHLAKFMRTLQRLADEFGVAVVITNQVV 271
>gi|449463635|ref|XP_004149537.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Cucumis
sativus]
Length = 371
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 114/226 (50%), Gaps = 23/226 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GGIP +TELV +G GKTQFCL+L+ A LP S+GGL +Y+ E F
Sbjct: 91 LDEALFGGIPFGVLTELVGPAGIGKTQFCLKLSFLAALPPSYGGLDGRVIYIDVESKFSS 150
Query: 87 RRLHQLSHTFRPSNDHNPCDY-------IFVQSVHSVDQLLDIMPKIE-SFIKNSSNSRL 138
+R+ ++ P + N D I V S+ + + + KI+ S ++
Sbjct: 151 KRMIEIGMRSFP-DVFNKKDMAQEMAGRILVLRPASLSEFTESLHKIKVSLLEQE----- 204
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
++L++IDS+AAL +++ + K+ S L + IS +K++A + V+VTNQV
Sbjct: 205 -VKLVIIDSMAALITGEYE--LGAPKQHS-LGWHIS-FIKSIAEFARIPVVVTNQVRSRN 259
Query: 199 EPNEGVNGLRVGNLG-CL-YSS--GRPICPALGIAWANCVNSRLFL 240
+ + C YSS G I ALG+ WA+ V RL L
Sbjct: 260 RKEVSHYSFQGWSRSECQEYSSGYGSHIVAALGVHWAHSVTIRLVL 305
>gi|410721995|ref|ZP_11361313.1| DNA repair and recombination protein RadA [Methanobacterium sp.
Maddingley MBC34]
gi|410597944|gb|EKQ52545.1| DNA repair and recombination protein RadA [Methanobacterium sp.
Maddingley MBC34]
Length = 311
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 6/172 (3%)
Query: 23 GCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEF 82
G +D +GGGI +ITE+ E GSGK+Q ++ ++ QLP GGL +++ TE
Sbjct: 82 GSTGLDELIGGGIETQAITEVFGEFGSGKSQISHEIAVTVQLPPEKGGLCGDCVFIDTEN 141
Query: 83 PFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRL 142
F R+ Q++ F + ++ +S Q+L + K+ I++ N IRL
Sbjct: 142 TFRPERIKQIAEGFTLDVEEVLGKIHIARAFNSSHQIL-MADKVNELIQSGVN----IRL 196
Query: 143 IVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+++DS+ A FR+++ + L R + L+ +A + +AV VTNQV
Sbjct: 197 VIVDSLTAHFRAEYVG-RESLATRQQKLNQHLHTLQNIANTYNVAVFVTNQV 247
>gi|452825486|gb|EME32482.1| DNA repair protein isoform 1 [Galdieria sulphuraria]
Length = 317
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 117/279 (41%), Gaps = 41/279 (14%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI +SITE+ E SGKTQ L ++AQLP S G Y+ T
Sbjct: 75 TTGSSALDELLGGGIETSSITEVFGEFRSGKTQLAHTLCVTAQLPKSVNGAEGRVAYIDT 134
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNS-RLP 139
E F R+ +++ F + D I V ++ + I+ +IE + ++
Sbjct: 135 ENCFRPERIVEIAERFEL-DPEEVLDNILVARAYTSEHQRQIL-QIELLVHIAAKMVEET 192
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
L+++DS ALFR D+ +L +R + L ++ F LAV +TNQV M
Sbjct: 193 FGLLIVDSATALFRVDYSGR-GELSERQQKLNRFMSQLLKLSEQFNLAVFITNQV---MS 248
Query: 200 PNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVG 259
+G G+ V + P P G A+ +R+ L +
Sbjct: 249 TPDGSAGMFVVD---------PKKPVGGHVIAHASTTRIMLRKG---------------- 283
Query: 260 GSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
R +R + +P LA+ FE++ GV
Sbjct: 284 ---------RGEQRVAKIYDSPMLAENEATFEVSSGGVI 313
>gi|358057228|dbj|GAA96837.1| hypothetical protein E5Q_03510 [Mixia osmundae IAM 14324]
Length = 342
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 89/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI +ITEL E +GK+Q C QL ++ QLP GG LY+ T
Sbjct: 104 TTGSKNLDNVLGGGIETGAITELFGEFRTGKSQICHQLAVTCQLPIDMGGGEGKCLYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N D + ++ D ++ + + + S
Sbjct: 164 EGTFRPVRLLAIAERY-GMNGEEVLDNVAYARAYNADHQQSLLVEASAMMAESR-----F 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+DF + +++ L + +L+ +A +G+AV++TNQVV
Sbjct: 218 CLLIVDSCTSLYRTDFAGRGELSARQTHLARFLRSLLR-LADEYGIAVVITNQVV 271
>gi|242064614|ref|XP_002453596.1| hypothetical protein SORBIDRAFT_04g008730 [Sorghum bicolor]
gi|241933427|gb|EES06572.1| hypothetical protein SORBIDRAFT_04g008730 [Sorghum bicolor]
Length = 344
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 108/243 (44%), Gaps = 27/243 (11%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT +LL + + T G +D LGGGI ITE E SGKTQ L +S QL
Sbjct: 93 MTGTDLLLKRKSVVRITTGSQALDELLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 153 PIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P RL+++DS+ ALFR DF +L +R ++ L +A
Sbjct: 213 LAAKM---------AEEPFRLLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIA 262
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F +AV +TNQV+ +P G ++ + P PA G A+ RL L
Sbjct: 263 EEFNVAVYITNQVI--ADPG-----------GGMFIT-DPKKPAGGHVLAHAATIRLMLR 308
Query: 242 RNE 244
+ +
Sbjct: 309 KGK 311
>gi|349745394|gb|AEQ16523.1| meiotic recombination protein DMC1 [Zea mays]
Length = 344
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 127/300 (42%), Gaps = 52/300 (17%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT +LL + + T G +D LGGGI ITE E SGKTQ L +S Q+
Sbjct: 93 MTGNDLLLKRKSVVRITTGSQALDELLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQV 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 153 PIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P +L+++DS+ ALFR DF +L +R ++ L +A
Sbjct: 213 LAAKM---------AEEPFKLLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIA 262
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F +AV +TNQV+ +P G ++ + P PA G A+ RL L
Sbjct: 263 EEFNVAVYITNQVI--ADPG-----------GGMFIT-DPKKPAGGHVLAHAATIRLMLR 308
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+ G G E VC+ + AP+L + F++T G+ V+
Sbjct: 309 K-----------------GKG-EQRVCK-------IFDAPNLPEGEAVFQVTSGGIMDVK 343
>gi|344238785|gb|EGV94888.1| DNA repair protein XRCC3 [Cricetulus griseus]
Length = 215
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D+ LGGG+P IT+L S +GKTQ LQL L+ Q P +GGL A
Sbjct: 76 PEQHQRLSLGCPVLDQFLGGGLPLEGITDLAGRSSAGKTQLGLQLCLTVQFPRQYGGLEA 135
Query: 74 SSLYLHTEFPFPMRRLHQL 92
++Y+ TE FP +RL QL
Sbjct: 136 GAVYICTEDAFPSKRLWQL 154
>gi|18857701|emb|CAD23442.1| putative RAD1 protein [Pleurotus ostreatus]
Length = 340
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 86/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI +ITE+ E +GK+Q C L ++ QLP S GG LY+ T
Sbjct: 101 TTGXKQLDALLGGGIETGAITEMFGEFRTGKSQICHTLAVTCQLPVSMGGGEGKCLYIDT 160
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N D + ++ D ++ + S SR
Sbjct: 161 EGTFRPVRLLAVAERY-GLNGEEVLDNVAYARAYNADHQNQLLTSATRLM---SESRFC- 215
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+DF +L R K L+ +A FG+AV++TNQV+
Sbjct: 216 -LLIVDSCTALYRTDFSG-RGELSSRQNHLGKFLRTLQRLADEFGIAVVITNQVM 268
>gi|66809625|ref|XP_638535.1| hypothetical protein DDB_G0284507 [Dictyostelium discoideum AX4]
gi|74897050|sp|Q54PJ7.1|RA51C_DICDI RecName: Full=DNA repair protein RAD51 homolog 3
gi|60467144|gb|EAL65180.1| hypothetical protein DDB_G0284507 [Dictyostelium discoideum AX4]
Length = 381
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 44/243 (18%)
Query: 24 CPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFP 83
C ID+ L GG P ITE+ G GKT QL ++ +P GG+ ++Y+ TE
Sbjct: 68 CSEIDQMLNGGTPLKKITEICGVPGIGKTNMAFQLLVNTSIPFDLGGVQGKAIYIDTEGS 127
Query: 84 FPMRRL-----HQLSH-------------TFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
+ +R+ H ++H T+ P+ + + I+ V+ +++ ++ +
Sbjct: 128 YSCQRVREMATHLVNHLECVLLKNPMTQTTYIPTVE-TVLNSIYYYRVYHYIEIISLIHQ 186
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ F++ + + ++LIV+DSI FR DF + L+ RS L ++ L +A +
Sbjct: 187 LPLFLEKNKD----VKLIVVDSITYPFRCDFKDM--GLRTRSLL--SLAQNLMNIATRYN 238
Query: 186 LAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSR--LFLSRN 243
LAV+V NQV + PN+ + L P LG +W + R LF +
Sbjct: 239 LAVVVMNQVTTKISPNQKESIL---------------VPYLGESWTHICTYRMVLFWKQK 283
Query: 244 EDF 246
+ F
Sbjct: 284 QRF 286
>gi|224069256|ref|XP_002326313.1| predicted protein [Populus trichocarpa]
gi|222833506|gb|EEE71983.1| predicted protein [Populus trichocarpa]
Length = 348
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 117/263 (44%), Gaps = 45/263 (17%)
Query: 39 SITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRP 98
SITE+ E SGKTQ C L ++ QLP GG ++Y+ E F +RL Q++ F
Sbjct: 130 SITEMYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRF-G 188
Query: 99 SNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDN 158
N + + + ++ D ++ + S + + L+++DS AL+R+DF
Sbjct: 189 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETR-----FALMIVDSATALYRTDFSG 243
Query: 159 TMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSS 218
+L R K L+ +A FG+AV++TNQVV ++ G +
Sbjct: 244 R-GELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVD-------------GSAIFA 289
Query: 219 GRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVV 278
G I P G A+ +RL L + G G E+ +C+ V+
Sbjct: 290 GPQIKPIGGNIMAHASTTRLALRK-----------------GRG-EERICK-------VI 324
Query: 279 FAPHLADTSCEFEITREGVFGVE 301
+P LA+ F+I+ EGV V+
Sbjct: 325 SSPCLAEAEARFQISAEGVTDVK 347
>gi|374628649|ref|ZP_09701034.1| DNA repair and recombination protein RadA [Methanoplanus limicola
DSM 2279]
gi|373906762|gb|EHQ34866.1| DNA repair and recombination protein RadA [Methanoplanus limicola
DSM 2279]
Length = 324
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 5/189 (2%)
Query: 10 LLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHG 69
+L+ K + P D L GG SI+E E GSGK+Q QL +++QLP G
Sbjct: 72 VLEERKKVRKLSTLVPEFDDLLAGGFETMSISECYGEFGSGKSQISHQLAVNSQLPLEVG 131
Query: 70 GLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPC----DYIFVQSVHSVDQLLDIMPK 125
GL S +Y+ TE F R+ Q+ + P ++I V + D + +
Sbjct: 132 GLDGSVIYIDTENTFRPERIRQMVEGLELDIEVPPVEDFLEHIHVAEAFTSDHQMLLAES 191
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ ++ P+RLIV+DS+ A FR+++ L R K L +A F
Sbjct: 192 VRELGNELKDTDKPVRLIVVDSLMAHFRAEYAGR-GTLSVRQQKLNKHMYDLAKLAKEFN 250
Query: 186 LAVLVTNQV 194
VLVTNQV
Sbjct: 251 AVVLVTNQV 259
>gi|358396157|gb|EHK45544.1| meiosis defective protein MEI3, partial [Trichoderma atroviride IMI
206040]
Length = 351
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI S+TEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 107 TTGSKNLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 166
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ F S + D + ++ D L ++ + + + + S
Sbjct: 167 EGTFRPVRLLAVANRFGLSGEE-VLDNVAYARAYNSDHQLQLLNQAAAMMCETRFS---- 221
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+DF +L R + L+ +A FG+AV++TNQVV
Sbjct: 222 -LLIVDSATSLYRTDFTG-RGELSNRQTHLARFMRTLQRLADEFGIAVVITNQVV 274
>gi|406602980|emb|CCH45448.1| hypothetical protein BN7_5030 [Wickerhamomyces ciferrii]
Length = 372
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 34/250 (13%)
Query: 15 LTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSAS 74
+ E T G D+ L GG+ ITE+ ES + K+QF +QLT + L GGL +
Sbjct: 79 INQEVFTTGDLEFDKILNGGLRTGMITEIFGESSTAKSQFSMQLTKTINLSPDQGGLGGN 138
Query: 75 SLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSS 134
S+Y+ TE +RL +++ P ++ YI + + +L + ++ +K+
Sbjct: 139 SVYISTEGNLETKRLIEIN----PGIEN--VYYINCSDFETQEHILKV--QLPLLLKDPE 190
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNT-MDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQ 193
+ IRL++IDSI+ R + N+ ++ K + + L + F +++++TNQ
Sbjct: 191 KN---IRLVIIDSISHHLRVELLNSNYENFNKNQIILQNLGIYLNKLCTDFNISMILTNQ 247
Query: 194 VVDLMEPNEGVNGLRVGNLGCLYSSG--------------------RPICPALGIAWANC 233
+ D +P+ + + Y G P LG+ W+N
Sbjct: 248 ISD--KPDSNILNTNFKKISMDYQIGWLSGWSSQDIRNRQDNEFQLNSKIPTLGLNWSNL 305
Query: 234 VNSRLFLSRN 243
+N R+ L +N
Sbjct: 306 INVRILLKKN 315
>gi|169236999|ref|YP_001690199.1| DNA repair and recombination protein RadA [Halobacterium salinarum
R1]
gi|13878695|sp|Q9HMM4.2|RADA_HALSA RecName: Full=DNA repair and recombination protein RadA
gi|226736606|sp|B0R7Y4.1|RADA_HALS3 RecName: Full=DNA repair and recombination protein RadA
gi|167728065|emb|CAP14853.1| DNA repair and recombination protein RadA [Halobacterium salinarum
R1]
Length = 343
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 24/199 (12%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T P +D LGGG+ SITE+ E G+GK+Q QL ++ QLP+ +GGL ++++
Sbjct: 81 KLTWNIPEVDDLLGGGVETQSITEVYGEFGAGKSQVTHQLAVNVQLPTEYGGLHGRAVFI 140
Query: 79 HTEFPFPMRRLHQL--------------SHTFRPSNDHNPC---------DYIFVQSVHS 115
+E F R+ + +H S D D I V +
Sbjct: 141 DSEDTFRPERIDDMVRGLSDETLQAAMEAHEIEGSTDDEDTLTELVDAFLDKIHVAKGFN 200
Query: 116 VDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISG 175
+ + + K + + P+R++ +DS+ A FR+++ +L R K
Sbjct: 201 SNHQMLLAEKAKEIASEHEDGDWPVRMLTVDSLTAHFRAEY-VGRGELADRQQKLNKHLH 259
Query: 176 MLKAMAVGFGLAVLVTNQV 194
L+ + + AVLVTNQV
Sbjct: 260 DLEKVGNLYNAAVLVTNQV 278
>gi|395837908|ref|XP_003791870.1| PREDICTED: DNA repair protein RAD51 homolog 1 [Otolemur garnettii]
Length = 310
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 53/226 (23%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 101 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 160
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE TFRP ++LL + +++ + +
Sbjct: 161 DTE------------GTFRP------------------ERLLAVAERLQKIL-------I 183
Query: 139 PIR--LIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
P R L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV
Sbjct: 184 PCRYALLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVA 242
Query: 197 LMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
++ G + P P G A+ +RL+L +
Sbjct: 243 QVD-------------GAAMFAADPKKPIGGNIIAHASTTRLYLRK 275
>gi|18461373|gb|AAL71907.1|AF265548_1 meiotic protein Dmc1A [Oryza sativa Indica Group]
Length = 344
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 125/297 (42%), Gaps = 52/297 (17%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T +LL + + T G +D+ LGGGI ITE E SGKTQ L +S QL
Sbjct: 93 ITGSDLLIKRKSVVRITTGSQALDKLLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 153 PIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P RL+++DS+ ALFR DF +L +R ++ L +A
Sbjct: 213 LAAKM---------AEEPFRLLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIA 262
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F +AV +TNQV+ +P G+ + +L PA G A+ RL L
Sbjct: 263 EEFNVAVYITNQVI--ADPG---GGMFITDLK---------KPAGGHVLAHAATIRLMLR 308
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
+ + E VC+ + AP+L + F++T G+
Sbjct: 309 KGK------------------GEQRVCK-------IFDAPNLPEGEAVFQVTSGGIM 340
>gi|119614837|gb|EAW94431.1| RAD51 homolog C (S. cerevisiae), isoform CRA_b [Homo sapiens]
Length = 305
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 28/219 (12%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T LL+ T C +D LGGG+P TE+ G GKTQ C+QL + Q+P
Sbjct: 86 TALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIP 145
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLS-----HTFRPSNDH---------------NPC 105
GG++ ++++ TE F + R+ L+ H + H N
Sbjct: 146 ECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTLDNIL 205
Query: 106 DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKK 165
+I+ +LL + + F+ S +RL+++D IA FR D +DDL
Sbjct: 206 SHIYYFRCRDYTELLAQVYLLPDFLSEHSK----VRLVIVDGIAFPFRHD----LDDLSL 257
Query: 166 RSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGV 204
R+ L ++ + ++A LAV++TNQ+ ++ N+ +
Sbjct: 258 RTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQAL 296
>gi|412987893|emb|CCO19289.1| DNA repair protein RAD51 homolog 1 [Bathycoccus prasinos]
Length = 321
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 112/283 (39%), Gaps = 45/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D L GGI SITE+ E GKTQ C L +S QLP GG A Y+
Sbjct: 84 RITTGSKAVDEVLAGGIQTRSITEIHGEWRCGKTQLCHTLAVSTQLPFEMGGGYAKVAYI 143
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ +++ + + + I + + +Q+ D + I +
Sbjct: 144 DTEGTFRSERILEIAERY-GMDGEAVLENIMIARTFTHEQMEDALLAIAGKMAEE----- 197
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
P +L+++DS+ A +R DF +L R + L +A F LA++ TNQV
Sbjct: 198 PFKLLIVDSVMAHYRVDFTGR-GELSGRQQRLGQFMSKLSKLADEFNLAIVCTNQV---- 252
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+ + G ++ P P G A+ RL + +
Sbjct: 253 QSDPGAMA---------FAGVEPKKPIGGHVLAHASTIRLCVRKG--------------- 288
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
R R L V+ P L + EF I+ GV +E
Sbjct: 289 ----------RAEARVLKVMQGPDLKEQDAEFMISNGGVVDIE 321
>gi|393186133|gb|AFN02862.1| putative DNA repair protein RAD51 [Phakopsora pachyrhizi]
Length = 340
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 20/225 (8%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE E +GK+Q C L+++ QLPS GG +++ T
Sbjct: 103 TTGSKNLDTMLGGGIDTQSITEFYGEFRTGKSQLCHHLSVTCQLPSDMGGGEGKCMFIDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R+ ++ + D + I V ++ D ++ + + SR I
Sbjct: 163 EGTFRPERVLAIAERYGLDGDE-VLNNIAVARAYNSDHQAQLLRDASRLM---TLSRFAI 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
+++DS AL+R+D+ + +++ L + G L +A FG+AV++TNQV + P
Sbjct: 219 --LIVDSATALYRTDYSGRGELADRQAHLAKFLRGCL-GLAEQFGIAVVITNQV--MSSP 273
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
+ G G G LG P G A+ +RL + D
Sbjct: 274 DSGPAG---GGLGK--------APIGGNIMAHSSTTRLQFRKGRD 307
>gi|116206996|ref|XP_001229307.1| hypothetical protein CHGG_02791 [Chaetomium globosum CBS 148.51]
gi|88183388|gb|EAQ90856.1| hypothetical protein CHGG_02791 [Chaetomium globosum CBS 148.51]
Length = 350
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI S+TEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 106 TTGSKQLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 165
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ + S + D + ++ D L ++ + + + + S
Sbjct: 166 EGTFRPVRLLAVANRYGLSGEE-VLDNVAYARAYNSDHQLQLLNQAAAMMCETRFS---- 220
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS +L+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 221 -LLVVDSATSLYRTDFLG-RGELNSRQTHLAKFLRTLQRLADEFGIAVVITNQVV 273
>gi|448406909|ref|ZP_21573341.1| DNA repair and recombination protein RadA [Halosimplex carlsbadense
2-9-1]
gi|445676715|gb|ELZ29232.1| DNA repair and recombination protein RadA [Halosimplex carlsbadense
2-9-1]
Length = 348
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 31/206 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T +D LGGGI SITE+ E G+GK+Q Q++++ QLPS HGGL S++++
Sbjct: 81 KLTWSVDEVDDLLGGGIETQSITEVYGEFGAGKSQVTHQISVTVQLPSEHGGLEGSAMFI 140
Query: 79 HTEFPFPMRRLHQ---------------LSHTFRPSNDHNPCD--------YIFVQSVH- 114
+E F R+ Q L D + D + + ++H
Sbjct: 141 DSEDTFRPERIDQMVKGLADEVLEDTMVLHGVVEEPEDADATDEALLDDLVEVMLDNIHV 200
Query: 115 -----SVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFL 169
S Q+L + + + S + PIRL+ +DS+ A FR+++ + ++ L
Sbjct: 201 AKAFNSNHQIL-LAEQAQELASESQDEEFPIRLLCVDSLTAHFRAEYVGRGELADRQQKL 259
Query: 170 FFKISGMLKAMAVGFGLAVLVTNQVV 195
+ +++ + AV+VTNQV
Sbjct: 260 NKHLHDLMRVGDL-HNTAVVVTNQVA 284
>gi|449269848|gb|EMC80589.1| DNA repair protein RAD51 like protein 3, partial [Columba livia]
Length = 327
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 102/237 (43%), Gaps = 45/237 (18%)
Query: 24 CPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFP 83
C +D LGGG+ ITE+ G GKTQ C+QL + Q+P GG++ ++++ TE
Sbjct: 56 CSALDNTLGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGS 115
Query: 84 FPMRRLH----------QLSHTFRPSNDH----------NPCDYIFVQSVHSVDQLLDIM 123
F + R+ QL + DH + +I+ +LL +
Sbjct: 116 FMVDRVADIAAACVQHCQLIAQAQQEEDHLKALETFSLESILSHIYYFRCRDYIELLAQV 175
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
+ F+ S +RL+V+D IA FR DF +DL R+ L ++ L +A
Sbjct: 176 YLLPDFLSEHSK----VRLVVLDGIAFPFRHDF----EDLSLRTRLLNGLAQQLIIIAND 227
Query: 184 FGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL 240
AV++TNQ+ R G S + PALG +W + RL L
Sbjct: 228 HKSAVVLTNQMTT-----------RFGQ------SQPMLVPALGESWGHAATVRLIL 267
>gi|346323849|gb|EGX93447.1| DNA repair protein rhp57 [Cordyceps militaris CM01]
Length = 489
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 87/183 (47%), Gaps = 20/183 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGG+P ITE ESG+GKTQF L L L+ QLP GL +LY+ TE
Sbjct: 129 LDAALGGGVPVGYITEFTGESGAGKTQFLLSLCLAVQLPPPR-GLGRQALYVSTEAGLTT 187
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLD-IMPKIES------FIKNSSNSRLP 139
RRL Q+ S+D +L + P +ES + +R
Sbjct: 188 RRLAQM------LGGAAAAPDWAASPPPSLDHILSTVTPDLESQEHILEYQVPVLLARHD 241
Query: 140 IRLIVIDSIAALFRSDFDN------TMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQ 193
I L+V+DS+AA +R++F+ + R ++ L+ +A G+AV+V NQ
Sbjct: 242 IGLLVLDSVAANYRAEFEGGGLGARLGSGMGARGAQLVRLGAHLRDLARRHGIAVVVANQ 301
Query: 194 VVD 196
V D
Sbjct: 302 VAD 304
>gi|444706842|gb|ELW48160.1| Protein CASC5 [Tupaia chinensis]
Length = 1640
Score = 81.3 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+
Sbjct: 1402 QITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYI 1461
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + S + D + + D ++ + + + S +
Sbjct: 1462 DTEGTFRPERLLAVAERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYA-- 1518
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS AL+R+D+ +L R + ML +A FG+AV++TNQVV
Sbjct: 1519 ---LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVV 1571
>gi|429318287|emb|CCN27368.1| recombinase [Milnesium tardigradum]
Length = 366
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 21/226 (9%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +DR L GGI SITE+ E +GK+Q C L ++ QLP G LY+
Sbjct: 127 QITTGSKDLDRLLQGGIETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMNGGEGKCLYI 186
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + N ++ + + ++ D L ++ + + + S SR
Sbjct: 187 DTEGTFRPERLVAIAERY-GLNTNDVLENVAFARAYNTDHQLQLLLQAAAMM---SESRY 242
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+++DS AL+R+D+ +L R + ML +A FG+AVL+TNQVV +
Sbjct: 243 A--LLIVDSATALYRTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVLITNQVVAQV 299
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
+ G P P G A+ +RL+L + +
Sbjct: 300 DGMPG--------------QADPKKPIGGNIIAHASTTRLYLRKGK 331
>gi|15791243|ref|NP_281067.1| DNA repair and recombination protein RadA [Halobacterium sp. NRC-1]
gi|10581871|gb|AAG20547.1| DNA repair protein [Halobacterium sp. NRC-1]
Length = 386
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 24/199 (12%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T P +D LGGG+ SITE+ E G+GK+Q QL ++ QLP+ +GGL ++++
Sbjct: 124 KLTWNIPEVDDLLGGGVETQSITEVYGEFGAGKSQVTHQLAVNVQLPTEYGGLHGRAVFI 183
Query: 79 HTEFPFPMRRLHQL--------------SHTFRPSNDHNPC---------DYIFVQSVHS 115
+E F R+ + +H S D D I V +
Sbjct: 184 DSEDTFRPERIDDMVRGLSDETLQAAMEAHEIEGSTDDEDTLTELVDAFLDKIHVAKGFN 243
Query: 116 VDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISG 175
+ + + K + + P+R++ +DS+ A FR+++ +L R K
Sbjct: 244 SNHQMLLAEKAKEIASEHEDGDWPVRMLTVDSLTAHFRAEYVG-RGELADRQQKLNKHLH 302
Query: 176 MLKAMAVGFGLAVLVTNQV 194
L+ + + AVLVTNQV
Sbjct: 303 DLEKVGNLYNAAVLVTNQV 321
>gi|294656166|ref|XP_458414.2| DEHA2C16698p [Debaryomyces hansenii CBS767]
gi|199430910|emb|CAG86496.2| DEHA2C16698p [Debaryomyces hansenii CBS767]
Length = 350
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 108 TTGSKQLDTLLGGGIETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLYIDT 167
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + N + D + ++ + ++ + S S
Sbjct: 168 EGTFRPVRLVSIAQRY-GLNPEDCLDNVAYARAYNAEHQFQLLNHAAQMMSESRFS---- 222
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+++DSI +L+R+D+ +L R K L+ +A FG+AV++TNQVV
Sbjct: 223 -CLIVDSIMSLYRTDYSGRA-ELSARQTHVAKYMRTLQRLADEFGIAVVITNQVV 275
>gi|448737671|ref|ZP_21719707.1| DNA repair and recombination protein RadA [Halococcus thailandensis
JCM 13552]
gi|445803468|gb|EMA53763.1| DNA repair and recombination protein RadA [Halococcus thailandensis
JCM 13552]
Length = 344
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 130/320 (40%), Gaps = 65/320 (20%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G T ++L++ K + +D LGGG+ SITE+ E G+GK+Q QL +
Sbjct: 64 IGGFETGADVLEHRNEIGKLSWQVDEVDDLLGGGVETQSITEVYGEFGAGKSQVTHQLAV 123
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFV----QSVHSV 116
+ QLP+ +GGL S++++ +E F R+ ++ D + +S ++
Sbjct: 124 NVQLPNEYGGLEGSAIFIDSEDTFRPERIAEMVRGLADDALAAAMDQREIEGSPESEEAM 183
Query: 117 DQLLD-------------------IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFD 157
D+L+D + K + +S P+RL+ IDS+ A FR+++
Sbjct: 184 DELIDSILDNIHVAKAFNSNHQILLAQKAQDIASEHEDSEWPVRLVCIDSLTAHFRAEYV 243
Query: 158 NTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYS 217
+ +++ L + + K + F A +VTNQV N +
Sbjct: 244 GRGELAQRQQKLNKHLHDIDKVGNL-FNAATVVTNQV--------------ASNPDSYF- 287
Query: 218 SGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHV 277
G P P G + R++L + + T+R + +
Sbjct: 288 -GDPTQPIGGNILGHKSTFRMYLRK-------------------------SKGTKRIVRL 321
Query: 278 VFAPHLADTSCEFEITREGV 297
V AP+LAD + EG+
Sbjct: 322 VDAPNLADGEAVMRVEEEGL 341
>gi|310794671|gb|EFQ30132.1| DNA repair protein RAD57 [Glomerella graminicola M1.001]
Length = 462
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 93/183 (50%), Gaps = 21/183 (11%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+DR LGGG+P +TE+ ESG GKTQ L L L+ QLP + GL +LY+ TE
Sbjct: 102 LDRALGGGLPTGYVTEVTGESGVGKTQLLLSLLLAVQLPPPY-GLGRPALYITTEAQLST 160
Query: 87 RRLHQ-LSHTFR----PSNDHNPCDYIFVQS---VHSVDQLLDIMPKIESFIKNSSNSRL 138
RL Q LS R P D D I S + S + +L +E +N+
Sbjct: 161 IRLSQMLSANPRFADLPPGDRPSLDGISSTSTPDLESQEHILQFQVPVEVERRNTG---- 216
Query: 139 PIRLIVIDSIAALFRSDFDNTM-----DDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQ 193
LIV+DS+A+ +R++F+ ++ RS ++ +L+ +A + LAV+V NQ
Sbjct: 217 ---LIVLDSVASNYRAEFERGHVSSLGSNMGARSTELTRLGALLRELAQKYNLAVVVANQ 273
Query: 194 VVD 196
V D
Sbjct: 274 VAD 276
>gi|71745272|ref|XP_827266.1| DNA recombination/repair protein RAD51/Dmc1 [Trypanosoma brucei]
gi|70831431|gb|EAN76936.1| RAD51/dmc1 protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261331479|emb|CBH14473.1| RAD51/dmc1 protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 349
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ LGGGI SITE E +GKTQ L ++ QLP S GG + ++Y+
Sbjct: 111 RVTTGSTALDQLLGGGIESMSITEAFGEFRTGKTQIAHTLCVTCQLPISMGGGNGKAIYV 170
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ ++ F + I V ++ + + ++ + + + S
Sbjct: 171 DTEATFRPERIKPIAERF-GLDVEAVLGNILVARAYTHEHQMHLLSMVAAKMVEDQFS-- 227
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+V+DS+ ALFR DF + +++ L +S M+K +A + +AV +TNQVV
Sbjct: 228 ---LLVVDSVTALFRVDFSGRGELAERQQKLAKMLSNMIK-LAEEYNVAVYITNQVV 280
>gi|341903964|gb|EGT59899.1| CBN-RAD-51 protein [Caenorhabditis brenneri]
Length = 357
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 22 VGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTE 81
G +DR LGGGI SITE+ E +GKTQ C L + QLP GG +Y+ T
Sbjct: 120 TGSAALDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTN 179
Query: 82 FPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIR 141
F R+ ++ + + H + I V ++ + L+ ++ + + + S SR +
Sbjct: 180 ATFRPERIIAIAQRYNMDSAH-VLENIAVARAYNSEHLMALIIRAGAMM---SESRYAV- 234
Query: 142 LIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLK---AMAVGFGLAVLVTNQVV 195
+++D A FR+++ DL +R K+S LK +A +G+AV++TNQVV
Sbjct: 235 -VIVDCATAHFRNEYTGR-GDLAERQ---MKLSAFLKCLAKLADEYGVAVIITNQVV 286
>gi|308810088|ref|XP_003082353.1| RAD51-like protein 2 (ISS) [Ostreococcus tauri]
gi|116060821|emb|CAL57299.1| RAD51-like protein 2 (ISS) [Ostreococcus tauri]
Length = 570
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 118/295 (40%), Gaps = 57/295 (19%)
Query: 9 NLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSH 68
+L++ + C +D L GGI ITE G GKTQ C Q+ +SA P +
Sbjct: 90 EVLEDERRRPRTVTCCEALDDVLDGGIGSGEITEFCGCPGVGKTQMCTQVCVSASTPEAF 149
Query: 69 GGLSASSLYLHTEFPF--------------PMRRLH----------QLSHTFRPSNDHNP 104
GG ++Y+ TE F +RR+ ++
Sbjct: 150 GGTDGEAVYVDTEGSFMADRAMDVASALVEHLRRMEACESDSERRTEMKAALEGYTAEKI 209
Query: 105 CDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLK 164
I + H V +LL ++ + FI +RL+VIDS+A FR DF D+
Sbjct: 210 LSGIHLFRCHEVTELLAVLETLGEFIAEHPR----VRLVVIDSVAFHFRQDF----QDMA 261
Query: 165 KRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICP 224
R+ + K++ L ++A +AV+ NQV ++P + + P
Sbjct: 262 LRTTILSKMTNRLMSIATSRDVAVVTVNQVT--VKPQQ--------------DGPARLVP 305
Query: 225 ALGIAWANCVNSRLFLSRNED----FVVRENQMVNGGV-----GGSGSEDFVCRR 270
ALG ++A+ +R+ LS D FV + ++ G S++ C R
Sbjct: 306 ALGESYAHACTTRVILSWENDERVAFVTKSPRLPQAKAKYTITAGEMSDEIRCTR 360
>gi|340379463|ref|XP_003388246.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Amphimedon
queenslandica]
Length = 356
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 119/294 (40%), Gaps = 69/294 (23%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
ID LGGG+P ITE G GKTQ +QL + A LP GG S+Y+ TE F +
Sbjct: 65 IDGMLGGGVPVGKITEFCGSPGIGKTQLSIQLAIDATLPEPFGGCGGHSVYIDTEGSFVI 124
Query: 87 RRLHQLS-----HTFRPSNDHNPCDYIFVQSVHSVD---------------QLLDIMPKI 126
R+ Q++ H + + + V ++++ QL+ + +
Sbjct: 125 DRVVQIATATVRHVHSVAKSSADPELLAVADGYTLEVVLGNIHYYRCHNHIQLIALSNIL 184
Query: 127 ESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGL 186
I N NS+ + LIV+DSIA+ FRS F D+ R L ++ +A F L
Sbjct: 185 HQTISN-INSK--VCLIVVDSIASPFRSSF----KDMGLRHRLLSGLAQTFLKLATQFSL 237
Query: 187 AVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDF 246
AV+ TNQ+ + N + PALG +W + R+ L
Sbjct: 238 AVVFTNQMTTKTQSN----------------GQSQLVPALGESWGHVCTIRVILYWE--- 278
Query: 247 VVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
G E R H+ +P ++ ++IT++GV V
Sbjct: 279 ---------------GKE--------RQAHLYKSPSHPESVVSYQITKDGVRDV 309
>gi|448732182|ref|ZP_21714464.1| DNA repair and recombination protein RadA [Halococcus salifodinae
DSM 8989]
gi|445805094|gb|EMA55321.1| DNA repair and recombination protein RadA [Halococcus salifodinae
DSM 8989]
Length = 344
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G T N+L+ K T +D LGGG+ SITE+ E G+GK+Q QL++
Sbjct: 64 IGGFETGANVLERRNEIGKLTWQVDEVDELLGGGVETQSITEVYGEFGAGKSQVTHQLSV 123
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQL--------------SHTFRPSNDHNPCD 106
+ QLP+ +GGL S++++ +E F R+ Q+ S D
Sbjct: 124 NVQLPNEYGGLEGSAIFIDSEDTFRPERIAQMVRGLPDEAIAAAMEVREIEGSPDSEEAM 183
Query: 107 YIFVQSV----------HSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDF 156
F++S+ +S Q+L + K + S P+RL+ IDS+ A FR+++
Sbjct: 184 DEFIESILDNIHVAKAFNSNHQIL-LAQKAQEIAAEHEESEWPVRLVCIDSLTAHFRAEY 242
Query: 157 DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+ +++ L + + K + + A +VTNQV
Sbjct: 243 VGRGELAQRQQKLNKHLHDIDKVGNL-YNAATVVTNQVA 280
>gi|268552839|ref|XP_002634402.1| C. briggsae CBR-RAD-51 protein [Caenorhabditis briggsae]
Length = 361
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 22 VGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTE 81
G +DR LGGGI SITE+ E +GKTQ C L + QLP GG +Y+ T
Sbjct: 124 TGSAALDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTN 183
Query: 82 FPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIR 141
F R+ ++ + + H + I V ++ + L+ ++ + + + S SR +
Sbjct: 184 ATFRPERIIAIAQRYNMDSAH-VLENIAVARAYNSEHLMALIIRAGAMM---SESRYAV- 238
Query: 142 LIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLK---AMAVGFGLAVLVTNQVV 195
+++D A FR+++ DL +R K+S LK +A +G+AV++TNQVV
Sbjct: 239 -VIVDCATAHFRNEYTGR-GDLAERQ---MKLSAFLKCLAKLADEYGVAVIITNQVV 290
>gi|402086982|gb|EJT81880.1| DNA repair protein rhp51 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 353
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GG+ S+TEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 107 TTGSKNLDTLLAGGVETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 166
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ F S + D + ++ D L ++ + + + + S
Sbjct: 167 EGTFRPVRLLAVANRFGLSGEE-VLDNVAYARAYNSDHQLQLLNQAAAMMCETRFS---- 221
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 222 -LLIVDSATSLYRTDFLG-RGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVV 274
>gi|341903203|gb|EGT59138.1| hypothetical protein CAEBREN_12768 [Caenorhabditis brenneri]
Length = 357
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 22 VGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTE 81
G +DR LGGGI SITE+ E +GKTQ C L + QLP GG +Y+ T
Sbjct: 120 TGSAALDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTN 179
Query: 82 FPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIR 141
F R+ ++ + + H + I V ++ + L+ ++ + + + S SR +
Sbjct: 180 ATFRPERIIAIAQRYNMDSAH-VLENIAVARAYNSEHLMALIIRAGAMM---SESRYAV- 234
Query: 142 LIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLK---AMAVGFGLAVLVTNQVV 195
+++D A FR+++ DL +R K+S LK +A +G+AV++TNQVV
Sbjct: 235 -VIVDCATAHFRNEYTGR-GDLAERQ---MKLSAFLKCLAKLADEYGVAVIITNQVV 286
>gi|345561224|gb|EGX44320.1| hypothetical protein AOL_s00193g48 [Arthrobotrys oligospora ATCC
24927]
Length = 343
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 7/176 (3%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D LGGG SI+E+ E GKTQ L ++ QLP GG + + Y+
Sbjct: 100 RISTGSKNLDAILGGGFTTMSISEVFGEFRCGKTQMGHTLCVTCQLPKDMGGAAGKAAYV 159
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ +S F D + ++ ++V+S Q+ I E F
Sbjct: 160 DTEGTFRPDRIRAISERFGVDGDACLENILYARAVNSEVQMELIQKLAEPFASGE----- 214
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
RL+V+DSI A FR D+ +L +R ++ L MA F +AV +TNQV
Sbjct: 215 -YRLLVVDSIMACFRVDYSGR-GELSERQQKLGQMLARLTTMAEEFNIAVYMTNQV 268
>gi|347828562|emb|CCD44259.1| similar to meiotic recombination protein dmc1 [Botryotinia
fuckeliana]
Length = 377
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 108/245 (44%), Gaps = 27/245 (11%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D CL GG SI+E+ E GKTQ L + AQLP GG Y+
Sbjct: 119 RISTGSKQLDACLNGGFQTMSISEVYGEFRCGKTQLAHTLAVIAQLPKEMGGAEGKVAYI 178
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIK-NSSNSR 137
TE F R+ +++ F D + ++ ++ ++ L+ ++ +I SF N
Sbjct: 179 DTEGTFRPERISEIAERFGVDPDQALENIVYARAHNTEVYLVVLLIQIISFTDHNQMQQE 238
Query: 138 L-----------PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGL 186
L RL++IDSI AL+RSDF +L +R MA F L
Sbjct: 239 LLEGLAQNFATDEYRLLIIDSIMALYRSDFIGR-GELSERQGALNAFLRKATQMAEEFNL 297
Query: 187 AVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL--SRNE 244
V +TNQV+ + G + L G + GR PA G A+ +R+ L R E
Sbjct: 298 VVFMTNQVM----SDPGASALFAG------ADGRK--PAGGHILAHASTTRVLLRKGRGE 345
Query: 245 DFVVR 249
+ V +
Sbjct: 346 ERVAK 350
>gi|409729967|ref|ZP_11271578.1| DNA repair and recombination protein RadA [Halococcus hamelinensis
100A6]
gi|448722272|ref|ZP_21704810.1| DNA repair and recombination protein RadA [Halococcus hamelinensis
100A6]
gi|445789983|gb|EMA40656.1| DNA repair and recombination protein RadA [Halococcus hamelinensis
100A6]
Length = 332
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 130/320 (40%), Gaps = 65/320 (20%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G T N+L+ K + +D LGGG+ SITE+ E G+GK+Q QL++
Sbjct: 52 IGGFETGANVLERREQIGKLSWQVDEVDDLLGGGVETQSITEVYGEFGAGKSQVTHQLSV 111
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQ----SVHSV 116
+ QLPS +GGL S++++ +E F R+ Q+ + ++ S ++
Sbjct: 112 NVQLPSEYGGLEGSAIFIDSEDTFRPERIDQMVRGLPEDAIAGAMEAREIEGGPNSEEAM 171
Query: 117 DQLLD-------------------IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFD 157
+QL+D + K + ++ P+RL+ IDS+ A FR+++
Sbjct: 172 EQLVDSILDKIHVAKAFNSNHQILLAQKAQEIASEQEDTDWPVRLVCIDSLTAHFRAEYV 231
Query: 158 NTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYS 217
+ +++ L + + K + + A +VTNQV N +
Sbjct: 232 GRGELAQRQQKLNKHLHDIDKVGNL-YNAATVVTNQV--------------SSNPDSYF- 275
Query: 218 SGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHV 277
G P P G + R++L + + T+R + +
Sbjct: 276 -GDPTQPIGGNILGHKSTFRMYLRK-------------------------SKGTKRIVRL 309
Query: 278 VFAPHLADTSCEFEITREGV 297
V AP+LAD + EG+
Sbjct: 310 VDAPNLADGEAVMRVEEEGL 329
>gi|422295451|gb|EKU22750.1| dna repair protein rad51, partial [Nannochloropsis gaditana
CCMP526]
Length = 676
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 7/171 (4%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D LGGG+ S+TE+ E +GKTQ C L +++QLP GG ++Y+
Sbjct: 50 QLSTGSKDLDALLGGGVETGSLTEIFGEFRTGKTQLCHTLCVTSQLPMDQGGGEGKAMYI 109
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F +RL ++ F D D + H+ +Q +D++ + + +
Sbjct: 110 DTEGTFRPQRLVAIAERFGLDVD-TVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYA-- 166
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVL 189
L+V+DS ALFR+D+ +L +R + L M+ FG+AV+
Sbjct: 167 ---LVVVDSATALFRTDYCGR-GELSERQMQLAQFLRQLTRMSEEFGVAVM 213
>gi|308493054|ref|XP_003108717.1| hypothetical protein CRE_10879 [Caenorhabditis remanei]
gi|308248457|gb|EFO92409.1| hypothetical protein CRE_10879 [Caenorhabditis remanei]
Length = 390
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 22 VGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTE 81
G +DR LGGGI SITE+ E +GKTQ C L + QLP GG +Y+ T
Sbjct: 135 TGSAALDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTN 194
Query: 82 FPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIR 141
F R+ ++ + + H + I V ++ + L+ ++ + + + S SR +
Sbjct: 195 ATFRPERIIAIAQRYNMDSAH-VLENIAVARAYNSEHLMALIIRAGAMM---SESRYAV- 249
Query: 142 LIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLK---AMAVGFGLAVLVTNQVV 195
+++D A FR+++ DL +R K+S LK +A +G+AV++TNQVV
Sbjct: 250 -VIVDCATAHFRNEYTGR-GDLAERQ---MKLSAFLKCLAKLADEYGVAVIITNQVV 301
>gi|156065967|ref|XP_001598905.1| hypothetical protein SS1G_00994 [Sclerotinia sclerotiorum 1980]
gi|154691853|gb|EDN91591.1| hypothetical protein SS1G_00994 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 325
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 111/235 (47%), Gaps = 25/235 (10%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D CL GG SI+E+ E GKTQ + + AQLP + GG Y+
Sbjct: 85 RISTGSKQLDACLNGGFQTMSISEVFGEFRCGKTQLAHTMAVIAQLPKNMGGAEGKVAYI 144
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ +++ F D + ++ ++ ++ QL +E +N +
Sbjct: 145 DTEGTFRPERIAEIAERFGVDPDQALENIVYARAQNTEMQL----ELLEGLAQNFATDEY 200
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFL--FFKISGMLKAMAVGFGLAVLVTNQVVD 196
RL++IDSI +L+RSDF + +++S L F + + MA F L V +TNQV+
Sbjct: 201 --RLLIIDSIMSLYRSDFIGRGELSERQSALNAFLRRA---TQMAEEFNLVVFMTNQVM- 254
Query: 197 LMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL--SRNEDFVVR 249
+ G + L G + GR PA G A+ +R+ L R E+ V +
Sbjct: 255 ---SDPGASALFAG------ADGRK--PAGGHILAHASTTRILLRKGRGEERVAK 298
>gi|308453438|ref|XP_003089441.1| hypothetical protein CRE_02731 [Caenorhabditis remanei]
gi|308240341|gb|EFO84293.1| hypothetical protein CRE_02731 [Caenorhabditis remanei]
Length = 390
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 22 VGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTE 81
G +DR LGGGI SITE+ E +GKTQ C L + QLP GG +Y+ T
Sbjct: 135 TGSAALDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTN 194
Query: 82 FPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIR 141
F R+ ++ + + H + I V ++ + L+ ++ + + + S SR +
Sbjct: 195 ATFRPERIIAIAQRYNMDSAH-VLENIAVARAYNSEHLMALIIRAGAMM---SESRYAV- 249
Query: 142 LIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLK---AMAVGFGLAVLVTNQVV 195
+++D A FR+++ DL +R K+S LK +A +G+AV++TNQVV
Sbjct: 250 -VIVDCATAHFRNEYTGR-GDLAERQ---MKLSAFLKCLAKLADEYGVAVIITNQVV 301
>gi|406862778|gb|EKD15827.1| DNA repair protein rhp51 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 350
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI S+TE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 106 TTGSKQLDTLLAGGIETGSVTEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 165
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ + S + D + ++ D L ++ + + + + S
Sbjct: 166 EGTFRPVRLLAVANRYGLSGEE-VLDNVAYARAYNSDHQLQLLNQASAMMCETRFS---- 220
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 221 -LLIVDSATSLYRTDFVG-RGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVV 273
>gi|195503840|ref|XP_002098822.1| GE23723 [Drosophila yakuba]
gi|194184923|gb|EDW98534.1| GE23723 [Drosophila yakuba]
Length = 406
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 17 TEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSL 76
T K G +D GGGI + EL+ SG+GKTQ CLQL L+ Q+P + GGL S+L
Sbjct: 179 TNKILTGNKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSAL 238
Query: 77 YLHTEFPFPMRRLHQL--------SHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIES 128
++ T F RL +L +H H ++ H + QL+ +
Sbjct: 239 FIDTNQDFHPDRLKELALKLERQYAHKVPEFKAHKMLQKVYYVKCHKLHQLMATVLSCHR 298
Query: 129 FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAV 188
+ N + I+LIVIDS+A R ++D +R + ++ ++ + LA
Sbjct: 299 HLANHPD----IKLIVIDSLAFTLR-----MLEDGAQRYEMLLELHESMRRLQRHHELAW 349
Query: 189 LVTN 192
+ TN
Sbjct: 350 VFTN 353
>gi|169623440|ref|XP_001805127.1| hypothetical protein SNOG_14961 [Phaeosphaeria nodorum SN15]
gi|160704983|gb|EAT77504.2| hypothetical protein SNOG_14961 [Phaeosphaeria nodorum SN15]
Length = 1641
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 111 TTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 170
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R +++ F S + D + ++ D L+++ + + + S
Sbjct: 171 EGTFRPVRCLAVANRFGLSGE-EVLDNVAYARAYNSDHQLELLNQAAQMMTETRFS---- 225
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 226 -LLIVDSATSLYRTDFAG-RGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVV 278
>gi|365982437|ref|XP_003668052.1| hypothetical protein NDAI_0A06550 [Naumovozyma dairenensis CBS 421]
gi|343766818|emb|CCD22809.1| hypothetical protein NDAI_0A06550 [Naumovozyma dairenensis CBS 421]
Length = 485
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 94/188 (50%), Gaps = 24/188 (12%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G ID LGGGI +ITE+ ES +GK+Q +QL LS QLP S GGL + +Y+ T
Sbjct: 105 TTGDVTIDESLGGGIFLGNITEIFGESSTGKSQLLMQLCLSVQLPKSMGGLESKCVYITT 164
Query: 81 EFPFPMRRLHQLSHTFRPS------NDHN----PCDYIFVQSVHSVD-QLLDIMPKIESF 129
E P RL + RP + HN C+ + Q H ++ QL ++ + ES
Sbjct: 165 EGDLPTTRLEGILDA-RPELKKHGVSQHNIFTVSCNDLITQE-HILNVQLPVLLEQNESK 222
Query: 130 IKNSSNSRLPIRLIVIDSIAALFRSDFD-NTMDDLKKRSFLFFKISGMLKAMAVGFGLAV 188
IK LI+IDSI+ R + N++ + + +++ L +A LA+
Sbjct: 223 IK----------LIIIDSISHHMRVELQTNSIKASRNNRYYVEQMAERLLHIADKHSLAI 272
Query: 189 LVTNQVVD 196
+V NQV D
Sbjct: 273 VVANQVSD 280
>gi|224107947|ref|XP_002314664.1| predicted protein [Populus trichocarpa]
gi|222863704|gb|EEF00835.1| predicted protein [Populus trichocarpa]
Length = 352
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 27/229 (11%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D LGGGI ++ITE E SGKTQ L +S QLP+ G + Y+
Sbjct: 106 RITTGSQALDELLGGGIETSAITEAFGEFRSGKTQLAHTLCVSTQLPTQMHGGNGKVAYI 165
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLDIMPKIESFIKNSSN 135
TE F R+ ++ F + I+ ++ H + LL + K+
Sbjct: 166 DTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKM--------- 216
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
S P RL+++DS+ ALFR DF + +++ L +S ++K +A F +AV +TNQV+
Sbjct: 217 SEEPYRLLIVDSVIALFRVDFTGRGELAERQQKLAQMLSRLIK-IAEEFNVAVYMTNQVI 275
Query: 196 DLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
+P G ++ S P PA G A+ RL + +
Sbjct: 276 --ADPG-----------GGMFISD-PKKPAGGHVLAHAATIRLMFRKGK 310
>gi|226823355|ref|NP_001152813.1| RAD51 homolog C [Nasonia vitripennis]
Length = 314
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 13/185 (7%)
Query: 18 EKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLY 77
E ++ C ++ LGGGI C ITEL SGKTQ C+QL +S QL +GGL ++Y
Sbjct: 69 EHISLCCSELEAALGGGIQCRVITELSGVPFSGKTQICMQLCISVQLNKCYGGLDGRAIY 128
Query: 78 LHT-------EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFI 130
+ T F +R L++ SH N I + S +SV++ + I+ ++ +
Sbjct: 129 IDTRSGTCASRFKDIVRGLNK-SHKDLNLNADEVLKCIEILSPNSVEEFVQIIDSLKFKM 187
Query: 131 KNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLV 190
K++ + + +RLI++DS++ +DD KR + + I L +A+ LAV++
Sbjct: 188 KSNKDEK-KVRLIIVDSLSMPILC----CIDDPTKRPYYYSHILHKLHKLALINELAVVI 242
Query: 191 TNQVV 195
TN++V
Sbjct: 243 TNELV 247
>gi|71997295|ref|NP_001023465.1| Protein RAD-51, isoform a [Caenorhabditis elegans]
gi|15718273|emb|CAB61038.2| Protein RAD-51, isoform a [Caenorhabditis elegans]
Length = 395
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 22 VGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTE 81
G +DR LGGGI SITE+ E +GKTQ C L + QLP GG +Y+ T
Sbjct: 158 TGSASLDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTN 217
Query: 82 FPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIR 141
F R+ ++ + + H + I V ++ + L+ ++ + + + S SR +
Sbjct: 218 ATFRPERIIAIAQRYNMDSAH-VLENIAVARAYNSEHLMALIIRAGAMM---SESRYAV- 272
Query: 142 LIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLK---AMAVGFGLAVLVTNQVV 195
+++D A FR+++ DL +R K+S LK +A +G+AV++TNQVV
Sbjct: 273 -VIVDCATAHFRNEYTGR-GDLAERQ---MKLSAFLKCLAKLADEYGVAVIITNQVV 324
>gi|71997301|ref|NP_001023466.1| Protein RAD-51, isoform b [Caenorhabditis elegans]
gi|2913897|dbj|BAA24982.1| RecA/Rad51/Dmc1-like protein [Caenorhabditis elegans]
gi|3786402|gb|AAD10194.1| RAD51 short isoform [Caenorhabditis elegans]
gi|35210311|emb|CAE47473.1| Protein RAD-51, isoform b [Caenorhabditis elegans]
Length = 357
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 22 VGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTE 81
G +DR LGGGI SITE+ E +GKTQ C L + QLP GG +Y+ T
Sbjct: 120 TGSASLDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTN 179
Query: 82 FPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIR 141
F R+ ++ + + H + I V ++ + L+ ++ + + + S SR +
Sbjct: 180 ATFRPERIIAIAQRYNMDSAH-VLENIAVARAYNSEHLMALIIRAGAMM---SESRYAV- 234
Query: 142 LIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLK---AMAVGFGLAVLVTNQVV 195
+++D A FR+++ DL +R K+S LK +A +G+AV++TNQVV
Sbjct: 235 -VIVDCATAHFRNEYTGR-GDLAERQ---MKLSAFLKCLAKLADEYGVAVIITNQVV 286
>gi|91080301|ref|XP_974146.1| PREDICTED: similar to RAD51 homolog protein [Tribolium castaneum]
gi|270006417|gb|EFA02865.1| spindle A-like protein [Tribolium castaneum]
Length = 338
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ LGGGI SITE+ E +GKTQ C L ++ QL GG LY+
Sbjct: 100 QLTTGSKELDKLLGGGIETGSITEIFGEFRTGKTQICHTLAVTCQLSVESGGGEGKCLYI 159
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + + +F ++ ++ D +++ + + S
Sbjct: 160 DTEGTFRPERLLPVAERYNMDGQQVLDNVVFARAFNT-DHQTELLVHAAAMMMESRYC-- 216
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+D+ +L R + ML +A FG+AV++TNQVV
Sbjct: 217 ---LLIVDSATSLYRTDYSG-RGELSARQNHLARFLRMLLRLADEFGVAVVLTNQVV 269
>gi|413950133|gb|AFW82782.1| hypothetical protein ZEAMMB73_481254 [Zea mays]
Length = 390
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 24/225 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGGIP +TE+V SG GKTQFCL+L L A LP +GGL +Y+ TEF F
Sbjct: 90 LDEALGGGIPTGKLTEVVGPSGIGKTQFCLKLALLAALPEYYGGLDGRVVYIDTEFKFSP 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQ---SVHSVDQLLDIMP-KIESFIKNSSNSRLP--- 139
RR+ ++ P IF Q + ++L + P + F K+ ++
Sbjct: 150 RRMIEIGQKSFPQ--------IFRQEGLAQKMAGRILVMRPTSLADFTKSLEEMKVTLLQ 201
Query: 140 --IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDL 197
++L+++DS+AAL + + ++ L + +S LK++A + V+VTNQV
Sbjct: 202 HDVKLLIVDSVAALMSMENEKATAGFRQHP-LRWSLS-FLKSIAEFSRIPVVVTNQVRS- 258
Query: 198 MEPNEGVNGL----RVGNLGCLYSSGRPICPALGIAWANCVNSRL 238
++G + R C + ALGI WA+ V RL
Sbjct: 259 QSNDDGYHFSFEVDRKDGSNCAERFDSHLVAALGIQWAHAVTVRL 303
>gi|218186424|gb|EEC68851.1| hypothetical protein OsI_37443 [Oryza sativa Indica Group]
Length = 396
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 13/194 (6%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T +LL + + T G +D+ LGGGI ITE E SGKTQ L +S QL
Sbjct: 93 ITGSDLLIKRKSVVRITTGSQALDKLLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 153 PIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P RL+++DS+ ALFR DF +L +R ++ L +A
Sbjct: 213 LAAKM---------AEEPFRLLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIA 262
Query: 182 VGFGLAVLVTNQVV 195
F +AV +TNQV+
Sbjct: 263 EEFNVAVYITNQVI 276
>gi|342879606|gb|EGU80851.1| hypothetical protein FOXB_08718 [Fusarium oxysporum Fo5176]
Length = 348
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI S+TEL E +GK+Q C L ++ QLP GG +Y+ T
Sbjct: 104 TTGSKNLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCMYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ F S + D + ++ D L ++ + + + + S
Sbjct: 164 EGTFRPVRLLGVANRFGLSGEE-VLDNVAYARAYNSDHQLQLLNQAAAMMCETRFS---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 219 -LLIVDSATSLYRTDFCG-RGELSNRQTHLAKFMRTLQRLADEFGIAVVITNQVV 271
>gi|453232188|ref|NP_001263771.1| Protein RAD-51, isoform c [Caenorhabditis elegans]
gi|442535369|emb|CCQ25700.1| Protein RAD-51, isoform c [Caenorhabditis elegans]
Length = 362
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 22 VGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTE 81
G +DR LGGGI SITE+ E +GKTQ C L + QLP GG +Y+ T
Sbjct: 125 TGSASLDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTN 184
Query: 82 FPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIR 141
F R+ ++ + + H + I V ++ + L+ ++ + + + S SR +
Sbjct: 185 ATFRPERIIAIAQRYNMDSAH-VLENIAVARAYNSEHLMALIIRAGAMM---SESRYAV- 239
Query: 142 LIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLK---AMAVGFGLAVLVTNQVV 195
+++D A FR+++ DL +R K+S LK +A +G+AV++TNQVV
Sbjct: 240 -VIVDCATAHFRNEYTGR-GDLAERQ---MKLSAFLKCLAKLADEYGVAVIITNQVV 291
>gi|91080339|ref|XP_974640.1| PREDICTED: similar to RAD51 homolog protein [Tribolium castaneum]
gi|270006418|gb|EFA02866.1| spindle A-like protein [Tribolium castaneum]
Length = 338
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ LGGGI SITE+ E +GKTQ C L ++ QL GG LY+
Sbjct: 100 QLTTGSKELDKLLGGGIETGSITEIFGEFRTGKTQICHTLAVTCQLALESGGGEGKCLYI 159
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ + + +F ++ ++ D +++ + + S
Sbjct: 160 DTEGTFRPERLLPVAERYNMDGQQVLDNVVFARAFNT-DHQTELLVHAAAMMMESRYC-- 216
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+D+ +L R + ML +A FG+AV++TNQVV
Sbjct: 217 ---LLIVDSATSLYRTDYSG-RGELSARQNHLARFLRMLLRLADEFGVAVVLTNQVV 269
>gi|46108550|ref|XP_381333.1| hypothetical protein FG01157.1 [Gibberella zeae PH-1]
gi|408395010|gb|EKJ74198.1| hypothetical protein FPSE_05637 [Fusarium pseudograminearum CS3096]
Length = 348
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI S+TEL E +GK+Q C L ++ QLP GG +Y+ T
Sbjct: 104 TTGSKNLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCMYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ F S + D + ++ D L ++ + + + + S
Sbjct: 164 EGTFRPVRLLGVANRFGLSGEE-VLDNVAYARAYNSDHQLQLLNQAAAMMCETRFS---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 219 -LLIVDSATSLYRTDFCG-RGELSNRQTHLAKFMRTLQRLADEFGIAVVITNQVV 271
>gi|440634655|gb|ELR04574.1| meiotic recombinase Dmc1 [Geomyces destructans 20631-21]
Length = 344
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 112/236 (47%), Gaps = 27/236 (11%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K + G +D L GG SI+E+ E GKTQ C + + AQLP GG ++
Sbjct: 104 KISTGSKQLDTILLGGFETMSISEIYGEFRCGKTQICHTMAVMAQLPREMGGAEGKVAWI 163
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFV-QSVHSVDQ--LLDIMPKIESFIKNSSN 135
TE F R+ Q++ F + CD I V +S++S Q LLD++ +F S
Sbjct: 164 DTEGTFRPERIAQIAERF-GVDPEQACDNICVSRSLNSEHQYELLDVL----AFNFCSGE 218
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
RL+VIDS+ ALFR+D+ +L +R + L A+A F + V++TNQV
Sbjct: 219 ----YRLLVIDSVMALFRTDYSGR-GELAERQQALGQFLKRLAALAEEFNVCVVMTNQV- 272
Query: 196 DLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL--SRNEDFVVR 249
+ + G + L G + GR P G A+ +R+ L R E+ V +
Sbjct: 273 ---QSDPGASALFAG------TDGRK--PVGGHVLAHASTTRVLLRKGRGEERVAK 317
>gi|414882035|tpg|DAA59166.1| TPA: hypothetical protein ZEAMMB73_144544 [Zea mays]
Length = 342
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 127/300 (42%), Gaps = 54/300 (18%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT +LL + + T G +D LGGGI ITE E SGKTQ L +S QL
Sbjct: 93 MTGNDLLLKSVV--RITTGSQALDELLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQL 150
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 151 PIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 210
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P +L+++DS+ ALFR DF +L +R ++ L +A
Sbjct: 211 LAAKM---------AEEPFKLLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIA 260
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F +AV +TNQV+ +P G ++ + P PA G A+ RL L
Sbjct: 261 EEFNVAVYITNQVI--ADPG-----------GGMFIT-DPKKPAGGHVLAHAATIRLMLR 306
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
+ G G E VC+ + AP+L + F++T G+ V+
Sbjct: 307 K-----------------GKG-EQRVCK-------IFDAPNLPEGEAVFQVTSGGIMDVK 341
>gi|366998431|ref|XP_003683952.1| hypothetical protein TPHA_0A04450 [Tetrapisispora phaffii CBS 4417]
gi|357522247|emb|CCE61518.1| hypothetical protein TPHA_0A04450 [Tetrapisispora phaffii CBS 4417]
Length = 466
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 25/188 (13%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G ID LGGGI + ITE+ ES +GK+QF + L+LS QLP S GGL+ S+Y+ T
Sbjct: 88 TTGDVEIDNLLGGGIYTHGITEIFGESSTGKSQFLMLLSLSVQLPLSLGGLNGKSVYITT 147
Query: 81 EFPFPMRRLHQLSHTFRP--SNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E P RL ++ T RP SN++ IF + D+M + E IK +L
Sbjct: 148 EGDLPTERLKEII-TSRPEFSNNNVSQSNIFTVGCN------DLMTQ-EHIIK----VQL 195
Query: 139 P--------IRLIVIDSIAALFRSDFDNT--MDDLKKRSFLFFKISGMLKAMAVGFGLAV 188
P I L++IDSI+ R + ++ + R ++ +++ L +A + +A+
Sbjct: 196 PVLLEQNKDINLLIIDSISHHMRVELQSSSFKESHANRHYI-NELAEHLLFLAKKYSVAI 254
Query: 189 LVTNQVVD 196
+V NQV D
Sbjct: 255 VVANQVSD 262
>gi|222615516|gb|EEE51648.1| hypothetical protein OsJ_32955 [Oryza sativa Japonica Group]
Length = 391
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 108/243 (44%), Gaps = 27/243 (11%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT +LL + + T G +D LGGGI ITE E SGKTQ L +S QL
Sbjct: 93 MTGSDLLIKRKSVVRITTGSQALDELLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 153 PIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P RL+++DS+ ALFR DF +L +R ++ L +A
Sbjct: 213 LAAKM---------AEEPFRLLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIA 262
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F +AV +TNQV+ +P G+ + + P PA G A+ RL L
Sbjct: 263 EEFNVAVYITNQVI--ADPG---GGMFITD---------PKKPAGGHVLAHAATIRLMLR 308
Query: 242 RNE 244
+ +
Sbjct: 309 KGK 311
>gi|212720586|ref|NP_001132052.1| uncharacterized protein LOC100193464 [Zea mays]
gi|194693306|gb|ACF80737.1| unknown [Zea mays]
Length = 363
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 24/225 (10%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGGIP +TE+V SG GKTQFCL+L L A LP +GGL +Y+ TEF F
Sbjct: 90 LDEALGGGIPTGKLTEVVGPSGIGKTQFCLKLALLAALPEYYGGLDGRVVYIDTEFKFSP 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQ---SVHSVDQLLDIMP-KIESFIKNSSNSRLP--- 139
RR+ ++ P IF Q + ++L + P + F K+ ++
Sbjct: 150 RRMIEIGQKSFPQ--------IFRQEGLAQKMAGRILVMRPTSLADFTKSLEEMKVTLLQ 201
Query: 140 --IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDL 197
++L+++DS+AAL + + ++ L + +S LK++A + V+VTNQV
Sbjct: 202 HDVKLLIVDSVAALMSMENEKATAGFRQHP-LRWSLS-FLKSIAEFSRIPVVVTNQVRS- 258
Query: 198 MEPNEGVNGL----RVGNLGCLYSSGRPICPALGIAWANCVNSRL 238
++G + R C + ALGI WA+ V RL
Sbjct: 259 QSNDDGYHFSFEVDRKDGSNCAERFDSHLVAALGIQWAHAVTVRL 303
>gi|7509776|pir||T26822 hypothetical protein Y43C5A.6 - Caenorhabditis elegans
Length = 391
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 22 VGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTE 81
G +DR LGGGI SITE+ E +GKTQ C L + QLP GG +Y+ T
Sbjct: 154 TGSASLDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTN 213
Query: 82 FPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIR 141
F R+ ++ + + H + I V ++ + L+ ++ + + + S SR +
Sbjct: 214 ATFRPERIIAIAQRYNMDSAH-VLENIAVARAYNSEHLMALIIRAGAMM---SESRYAV- 268
Query: 142 LIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLK---AMAVGFGLAVLVTNQVV 195
+++D A FR+++ DL +R K+S LK +A +G+AV++TNQVV
Sbjct: 269 -VIVDCATAHFRNEYTGR-GDLAERQ---MKLSAFLKCLAKLADEYGVAVIITNQVV 320
>gi|257387245|ref|YP_003177018.1| DNA repair and recombination protein RadA [Halomicrobium mukohataei
DSM 12286]
gi|257169552|gb|ACV47311.1| DNA repair and recombination protein RadA [Halomicrobium mukohataei
DSM 12286]
Length = 349
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 33/207 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T +D LGGGI SITE+ E G+GK+Q Q++++ QLP+ HGGL S++++
Sbjct: 82 KLTWSVSEVDDLLGGGIETQSITEVYGEFGAGKSQVTHQISVTVQLPAEHGGLEGSAIFV 141
Query: 79 HTEFPFPMRRLHQ---------------LSHTFRPSNDHNPCDYIFVQSVHSVDQLLD-- 121
+E F R+ Q L + D + D ++++ V+ +LD
Sbjct: 142 DSEDTFRPERIDQMVRGLDDDVLEDTMVLHGIVEEAGDADAGDEELLEAL--VESVLDKI 199
Query: 122 -------------IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSF 168
+ K + S + P+RL+ +DS+ A FR+++ + ++
Sbjct: 200 HVAKAFNSNHQILLAEKAQEIASESQDDDFPVRLLCVDSLTAHFRAEYVGRGELADRQQK 259
Query: 169 LFFKISGMLKAMAVGFGLAVLVTNQVV 195
L + +++ + AV+VTNQV
Sbjct: 260 LNKHLHDLMRVGDLN-NTAVVVTNQVA 285
>gi|443921989|gb|ELU41506.1| Rah1 [Rhizoctonia solani AG-1 IA]
Length = 363
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 89/177 (50%), Gaps = 12/177 (6%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITEL E +GK+Q C L ++ QLPS+ GG +Y+ T
Sbjct: 127 TTGSTQLDTLLGGGIETGSITELFGEFRTGKSQLCHTLAVTCQLPSNMGGGEGKCMYIDT 186
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQ--LLDIMPKIESFIKNSSNSRL 138
E F RL Q++ + + + ++ ++ Q LL ++ S+
Sbjct: 187 EGGFRPVRLLQVAERLGLDGEEVLQNVAYARAYNADHQNALL---------VQASAFGAC 237
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS L+R+DF +L R K +L+ +A FG+AV++TNQV+
Sbjct: 238 RFALLIVDSCTNLYRTDFSG-RGELSARQAHLGKFLRVLQRLADEFGIAVVITNQVM 293
>gi|119184014|ref|XP_001242973.1| hypothetical protein CIMG_06869 [Coccidioides immitis RS]
gi|392865876|gb|EAS31720.2| hypothetical protein CIMG_06869 [Coccidioides immitis RS]
Length = 591
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 97/186 (52%), Gaps = 22/186 (11%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P++D L GGI +TE+ ESGSGKTQ L L LS QLP + GL ++LY+ TE
Sbjct: 113 PLLDDVLSGGILTGYVTEIAGESGSGKTQLLLHLLLSVQLPPPY-GLRKNALYISTEADL 171
Query: 85 PMRRLHQL-----------SHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNS 133
RL QL RPS D+ V S+ +VD L+ I ++ +
Sbjct: 172 ATNRLSQLLDGHPLLISLPEDVQRPSLDN-------VLSITTVD--LETQDHILNYHVPA 222
Query: 134 SNSRLPIRLIVIDSIAALFRSDFD-NTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTN 192
+ SR + L+VIDSI A +R + N + L R++ ++ +L+ +AV +AV+V N
Sbjct: 223 AISRYNVGLVVIDSITANYRVESSTNNVCGLLDRAWELKRLGQLLRNLAVTHNIAVVVAN 282
Query: 193 QVVDLM 198
Q+ D +
Sbjct: 283 QISDRL 288
>gi|303320159|ref|XP_003070079.1| hypothetical protein CPC735_032700 [Coccidioides posadasii C735
delta SOWgp]
gi|240109765|gb|EER27934.1| hypothetical protein CPC735_032700 [Coccidioides posadasii C735
delta SOWgp]
gi|320031918|gb|EFW13875.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 591
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 97/186 (52%), Gaps = 22/186 (11%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P++D L GGI +TE+ ESGSGKTQ L L LS QLP + GL ++LY+ TE
Sbjct: 113 PLLDDVLSGGILTGYVTEIAGESGSGKTQLLLHLLLSVQLPPPY-GLRKNALYISTEADL 171
Query: 85 PMRRLHQL-----------SHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNS 133
RL QL RPS D+ V S+ +VD L+ I ++ +
Sbjct: 172 ATNRLSQLLDGHPLLISLPEDVQRPSLDN-------VLSITTVD--LETQDHILNYHVPA 222
Query: 134 SNSRLPIRLIVIDSIAALFRSDFD-NTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTN 192
+ SR + L+VIDSI A +R + N + L R++ ++ +L+ +AV +AV+V N
Sbjct: 223 AISRYNVGLVVIDSITANYRVESSINNVCGLLDRAWELKRLGQLLRNLAVTHNIAVVVAN 282
Query: 193 QVVDLM 198
Q+ D +
Sbjct: 283 QISDRL 288
>gi|355777947|gb|EHH62983.1| hypothetical protein EGM_15862 [Macaca fascicularis]
Length = 340
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 33 GGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQL 92
GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+ TE F RL +
Sbjct: 116 GGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAV 175
Query: 93 SHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALF 152
+ + S + D + + D ++ + + + S + L+++DS AL+
Sbjct: 176 AERYGLSGS-DVLDNVAYARAFNTDHQTQLLYQASAMMVESRYA-----LLIVDSATALY 229
Query: 153 RSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNL 212
R+D+ +L R + ML +A FG+AV++TNQVV ++
Sbjct: 230 RTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVD------------- 275
Query: 213 GCLYSSGRPICPALGIAWANCVNSRLFLSR 242
G + P P G A+ +RL+L +
Sbjct: 276 GAAMFAADPKKPIGGNIIAHASTTRLYLRK 305
>gi|336272433|ref|XP_003350973.1| RAD51 protein [Sordaria macrospora k-hell]
gi|380090740|emb|CCC04910.1| putative RAD51 protein [Sordaria macrospora k-hell]
Length = 353
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI S+TE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 107 TTGSKNLDTLLAGGIETGSVTEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 166
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ + S + D + ++ D L ++ + + + + S
Sbjct: 167 EGTFRPVRLLAVANRYGLSGEE-VLDNVAYARAYNSDHQLQLLNQAAAMMCETRFS---- 221
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 222 -LLIVDSATSLYRTDFLG-RGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVV 274
>gi|303318132|ref|XP_003069067.1| DNA repair protein rhp51, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108750|gb|EER26922.1| DNA repair protein rhp51, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320037268|gb|EFW19206.1| DNA repair protein RAD51 [Coccidioides posadasii str. Silveira]
gi|392869512|gb|EAS28023.2| DNA repair protein rhp51 [Coccidioides immitis RS]
Length = 348
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 7/179 (3%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GG+ SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 103 TTGSRQLDTLLAGGVETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + + D + ++ D L ++ + + + S
Sbjct: 163 EGTFRPVRLLAVAQRYGLAGEE-VLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
L+V+DS +L+R+DF +L R + L+ +A FG+AV++TNQVV +E
Sbjct: 218 -LLVVDSATSLYRTDFSG-RGELSSRQTHLARFMRTLQRLADEFGVAVVITNQVVAQVE 274
>gi|119173930|ref|XP_001239326.1| hypothetical protein CIMG_08947 [Coccidioides immitis RS]
Length = 366
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 7/179 (3%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GG+ SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 121 TTGSRQLDTLLAGGVETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 180
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + + D + ++ D L ++ + + + S
Sbjct: 181 EGTFRPVRLLAVAQRYGLAGE-EVLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 235
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
L+V+DS +L+R+DF +L R + L+ +A FG+AV++TNQVV +E
Sbjct: 236 -LLVVDSATSLYRTDFSG-RGELSSRQTHLARFMRTLQRLADEFGVAVVITNQVVAQVE 292
>gi|403417754|emb|CCM04454.1| predicted protein [Fibroporia radiculosa]
Length = 345
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 6/175 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
+ G +D LGGGI SITE+ E +GKTQ +++ QLP GG + Y+
Sbjct: 108 VSTGSKSVDTILGGGIMSQSITEVYGEYRTGKTQLAHTMSVVTQLPPDMGGAAGKVAYID 167
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
TE F R+ ++ F + D + ++ ++ +S Q+ I F ++
Sbjct: 168 TEGTFRPDRIRSIAQRFGVNGDMALENILYARAFNSEHQMELINECSIRFAEDKD----- 222
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
RL+++DSI A FR+D+ +L +R ++ L ++ + +A+L+TNQV
Sbjct: 223 FRLLIVDSIMACFRTDYSGR-GELSERQQKLAQMLSKLSKLSEEYNIAILLTNQV 276
>gi|10944306|dbj|BAB16892.1| DMC1 [Cynops pyrrhogaster]
Length = 342
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++
Sbjct: 103 ITTGSQEFDKLLGGGIESMAITETFGEFRTGKTQLSHTLCVTAQLPGTDGYTGGKVIFID 162
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F S DH+ D + ++ + ++++ + + +
Sbjct: 163 TENTFRPDRLRDIADRF--SVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG--- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L+VIDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 218 IFKLLVIDSIMALFRVDFSGR-GELAERQQKLAQMLARLQKISEEYNVAVFVTNQMT 273
>gi|85116816|ref|XP_965126.1| DNA repair protein RAD51 [Neurospora crassa OR74A]
gi|2182133|dbj|BAA20366.1| MEI3 [Neurospora crassa]
gi|28926929|gb|EAA35890.1| DNA repair protein RAD51 [Neurospora crassa OR74A]
Length = 353
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI S+TE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 107 TTGSKNLDTLLAGGIETGSVTEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 166
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ + S + D + ++ D L ++ + + + + S
Sbjct: 167 EGTFRPVRLLAVANRYGLSGEE-VLDNVAYARAYNSDHQLQLLNQAAAMMCETRFS---- 221
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 222 -LLIVDSATSLYRTDFLG-RGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVV 274
>gi|159469155|ref|XP_001692733.1| DNA recombination protein [Chlamydomonas reinhardtii]
gi|45685351|gb|AAS75433.1| putative DNA repair protein RAD51 [Chlamydomonas reinhardtii]
gi|158277986|gb|EDP03752.1| DNA recombination protein [Chlamydomonas reinhardtii]
Length = 343
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 11/167 (6%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T GC +D L GGI SITE+ E GKTQ C L ++ QLP GG ++Y+ T
Sbjct: 106 TTGCKELDTILEGGIETGSITEIYGEYRCGKTQLCHTLCVTCQLPVEMGGGEGKAMYIDT 165
Query: 81 EFPFPMRRLHQLSHTF--RPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F +RL Q++ + P + N Y H+ + + ++ + + +S S
Sbjct: 166 EGTFRPQRLSQIAERYGLAPEDVLNNVAYA---RAHNTEHQMRLLQEAAGMMADSRFS-- 220
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
L+V+DS AL+R++F N +L R L + L+ +A +G
Sbjct: 221 ---LVVVDSATALYRTEF-NGRGELSIRQILLGRFLRALQNIADEYG 263
>gi|300708476|ref|XP_002996416.1| hypothetical protein NCER_100491 [Nosema ceranae BRL01]
gi|239605717|gb|EEQ82745.1| hypothetical protein NCER_100491 [Nosema ceranae BRL01]
Length = 336
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 6/177 (3%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G D LGGGI SITE+ E +GKTQ + ++ QL GG + ++
Sbjct: 96 RISTGSTDFDSLLGGGIQTMSITEMFGEFRTGKTQLATTMCITVQLSEEEGGAKGKAAFI 155
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++++ F D + I+ ++ +S Q + F ++S
Sbjct: 156 DTEGTFRPERLREIANRFNIDPDEALDNIIYARAYNSEHQNELVQQLAVKFAEDS----- 210
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L+VIDSI +LFR DF +L +R + L ++ F +AVL+TNQ++
Sbjct: 211 KYKLLVIDSIISLFRVDFSG-RGELGERQQKLNQFLSKLINISEEFNIAVLITNQMM 266
>gi|330508608|ref|YP_004385036.1| DNA repair and recombination protein RadA [Methanosaeta concilii
GP6]
gi|328929416|gb|AEB69218.1| DNA repair and recombination protein RadA [Methanosaeta concilii
GP6]
Length = 325
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G T +L+ K T C D LGGG+ +I EL E G GKTQ QL +
Sbjct: 63 VGGFETGDRILERRKQVGKVTTSCKSFDELLGGGMETQAIVELYGEFGCGKTQVAHQLAV 122
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSND---HNPCDYI----FVQSV 113
+ QLP GGL+ S + + TE F R+ Q+ P+ D D++ ++
Sbjct: 123 NIQLPVEMGGLNGSVIIIDTENTFRPERIDQMVKGLPPAPDGRIWETEDFLKNINVARAF 182
Query: 114 HSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFF 171
+S Q+L + + +S P+RL+++DS+ A FR+++ T+ D +++ L
Sbjct: 183 NSNHQIL-LAESAMDLAEKVKDSERPVRLLIVDSVTAHFRAEYVGRGTLADRQQK--LNK 239
Query: 172 KISGMLKAMAVGFGLAVLVTNQVV 195
+ +++ + L +LVTNQV+
Sbjct: 240 HLHDLMRFGDLNNAL-ILVTNQVM 262
>gi|238684533|gb|ACR54434.1| Rad51 [Mytilus edulis]
Length = 279
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 89/177 (50%), Gaps = 7/177 (3%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D+ L GGI SITE+ E +GKTQ L ++ QLP GG +LY+
Sbjct: 102 QITTGSKELDKLLQGGIETGSITEIFGEFRTGKTQLTHTLAVTCQLPIDMGGGEGKALYI 161
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
+E F RL ++ + S + D + ++ D ++ + + + S SR
Sbjct: 162 DSEGTFRPERLLAVAERYGLSGS-DVLDNVAYARAYNSDHQTQLLVQAAAMM---SESRY 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+D+ +L R + ML +A +G+AV++TNQVV
Sbjct: 218 A--LLIVDSATSLYRTDYSG-RGELSARQVHLARFLRMLLRLADEYGVAVVITNQVV 271
>gi|242089345|ref|XP_002440505.1| hypothetical protein SORBIDRAFT_09g002090 [Sorghum bicolor]
gi|241945790|gb|EES18935.1| hypothetical protein SORBIDRAFT_09g002090 [Sorghum bicolor]
Length = 364
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 111/226 (49%), Gaps = 26/226 (11%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGGIP +TE+V SG GKTQFCL+L L A LP +GGL +Y+ TEF F
Sbjct: 90 LDEALGGGIPMGKLTEVVGPSGIGKTQFCLKLALLAALPEYYGGLDGRVVYIDTEFKFSS 149
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQ---SVHSVDQLLDIMP-KIESFIKNSSNSRLP--- 139
RR+ ++ P IF Q + ++L I P + F K+ ++
Sbjct: 150 RRMIEIGQKSFPQ--------IFRQEGLAQKMAGRILVIRPTTLADFTKSLEEMKVTLLQ 201
Query: 140 --IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDL 197
++L+++DS+AAL + + + L + +S LK++A + V+VTNQV
Sbjct: 202 HDVKLLIVDSMAALMSLENEKVTAGFSQHP-LRWTLS-FLKSIAEFSRIPVVVTNQVRS- 258
Query: 198 MEPNEGVN-----GLRVGNLGCLYSSGRPICPALGIAWANCVNSRL 238
++G + + GN C + ALGI WA+ + RL
Sbjct: 259 QSNDDGYHFSFEVDKKDGN-KCAEKFDSHLVAALGIQWAHAITVRL 303
>gi|366996885|ref|XP_003678205.1| hypothetical protein NCAS_0I01950 [Naumovozyma castellii CBS 4309]
gi|342304076|emb|CCC71863.1| hypothetical protein NCAS_0I01950 [Naumovozyma castellii CBS 4309]
Length = 453
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 118/241 (48%), Gaps = 14/241 (5%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G ID LGGGI +ITE+ ES +GK+QF +QL+LS QLP GGL +Y+ T
Sbjct: 88 TTGDLAIDDILGGGIFTKNITEIFGESSTGKSQFLMQLSLSVQLPLKMGGLGGKCVYITT 147
Query: 81 EFPFPMRRLHQ-LSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
E P +R+ LS + D IF S + ++ I+ + +NS
Sbjct: 148 EGDLPTQRIEGILSSRSEFTESGVSQDNIFTVSCNDLESQEHILNVQLPVLLERNNS--A 205
Query: 140 IRLIVIDSIAALFRSDFD--NTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDL 197
I+L++IDSI+ R + + + RS++ + + L +A F +A++V NQV D
Sbjct: 206 IKLVIIDSISHHMRVELQGGSVKEAQNNRSYV-DQTAERLLDLANKFSVAIVVANQVGD- 263
Query: 198 MEP-NEGVNGLRVGNLGCLYSSGRPI-CPALGIAW----ANCVNSRLFLSRNEDFVVREN 251
+P E +N + L Y G + I + + +N+ LS +ED ++ E+
Sbjct: 264 -KPLQEVINPYQQSILDYEYQLGWLVGWKDSSIMYRQKQSELINNDDILSDDEDSILIES 322
Query: 252 Q 252
Q
Sbjct: 323 Q 323
>gi|397512615|ref|XP_003826636.1| PREDICTED: DNA repair protein RAD51 homolog 1 isoform 4 [Pan
paniscus]
gi|397512617|ref|XP_003826637.1| PREDICTED: DNA repair protein RAD51 homolog 1 isoform 5 [Pan
paniscus]
Length = 340
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 33 GGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQL 92
GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+ TE F RL +
Sbjct: 116 GGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAV 175
Query: 93 SHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALF 152
+ + S + D + + D ++ + + + S + L+++DS AL+
Sbjct: 176 AERYGLSGS-DVLDNVAYARAFNTDHQTQLLYQASAMMVESRYA-----LLIVDSATALY 229
Query: 153 RSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNL 212
R+D+ +L R + ML +A FG+AV++TNQVV ++
Sbjct: 230 RTDYSG-RGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVD------------- 275
Query: 213 GCLYSSGRPICPALGIAWANCVNSRLFLSR 242
G + P P G A+ +RL+L +
Sbjct: 276 GAAMFAADPKKPIGGNIIAHASTTRLYLRK 305
>gi|402873989|ref|XP_003900830.1| PREDICTED: DNA repair protein RAD51 homolog 1 isoform 2 [Papio
anubis]
gi|402873991|ref|XP_003900831.1| PREDICTED: DNA repair protein RAD51 homolog 1 isoform 3 [Papio
anubis]
Length = 340
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 33 GGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQL 92
GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+ TE F RL +
Sbjct: 116 GGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAV 175
Query: 93 SHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALF 152
+ + S + D + + D ++ + + + S + L+++DS AL+
Sbjct: 176 AERYGLSGS-DVLDNVAYARAFNTDHQTQLLYQASAMMVESRYA-----LLIVDSATALY 229
Query: 153 RSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNL 212
R+D+ +L R + ML +A FG+AV++TNQVV ++
Sbjct: 230 RTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVD------------- 275
Query: 213 GCLYSSGRPICPALGIAWANCVNSRLFLSR 242
G + P P G A+ +RL+L +
Sbjct: 276 GAAMFAADPKKPIGGNIIAHASTTRLYLRK 305
>gi|119719653|ref|YP_920148.1| Rad51-like [Thermofilum pendens Hrk 5]
gi|119524773|gb|ABL78145.1| Rad51-like protein [Thermofilum pendens Hrk 5]
Length = 250
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 15/190 (7%)
Query: 17 TEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSL 76
+ + + G +D L GGI SITE + E G+GKTQ C QL++ QLP GGL+A +L
Sbjct: 27 SARISTGVRSLDDLLEGGIEVGSITEFIGEFGAGKTQICHQLSVMVQLPKDKGGLNARAL 86
Query: 77 YLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK-IESFIKNSSN 135
Y+ TE F R+ Q++ R + + I +S+ L +++ K + +K
Sbjct: 87 YVDTEGTFRPERIVQIARA-RGLDPEKTLENIIYARAYSLGGLEELLSKALAEVVKGD-- 143
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+ L+V+D L R+ +R+ + I L+A+A G AV+V QVV
Sbjct: 144 ----VGLVVLDEATRLVRASGLGA----GERARAYAAIVSSLEAVAEA-GSAVVVARQVV 194
Query: 196 --DLMEPNEG 203
D + P G
Sbjct: 195 FGDGVRPAGG 204
>gi|256017141|ref|NP_597994.3| DNA repair protein RAD51 homolog 1 isoform 2 [Homo sapiens]
gi|256017143|ref|NP_001157741.1| DNA repair protein RAD51 homolog 1 isoform 2 [Homo sapiens]
gi|47077076|dbj|BAD18467.1| unnamed protein product [Homo sapiens]
gi|119612841|gb|EAW92435.1| RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae), isoform
CRA_e [Homo sapiens]
gi|158257370|dbj|BAF84658.1| unnamed protein product [Homo sapiens]
Length = 340
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 33 GGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQL 92
GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+ TE F RL +
Sbjct: 116 GGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAV 175
Query: 93 SHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALF 152
+ + S + D + + D ++ + + + S + L+++DS AL+
Sbjct: 176 AERYGLSGS-DVLDNVAYARAFNTDHQTQLLYQASAMMVESRYA-----LLIVDSATALY 229
Query: 153 RSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNL 212
R+D+ +L R + ML +A FG+AV++TNQVV ++
Sbjct: 230 RTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVD------------- 275
Query: 213 GCLYSSGRPICPALGIAWANCVNSRLFLSR 242
G + P P G A+ +RL+L +
Sbjct: 276 GAAMFAADPKKPIGGNIIAHASTTRLYLRK 305
>gi|114656382|ref|XP_001144544.1| PREDICTED: DNA repair protein RAD51 homolog 1 isoform 2 [Pan
troglodytes]
gi|332843553|ref|XP_003314670.1| PREDICTED: DNA repair protein RAD51 homolog 1 [Pan troglodytes]
Length = 340
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 33 GGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQL 92
GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+ TE F RL +
Sbjct: 116 GGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAV 175
Query: 93 SHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALF 152
+ + S + D + + D ++ + + + S + L+++DS AL+
Sbjct: 176 AERYGLSGS-DVLDNVAYARAFNTDHQTQLLYQASAMMVESRYA-----LLIVDSATALY 229
Query: 153 RSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNL 212
R+D+ +L R + ML +A FG+AV++TNQVV ++
Sbjct: 230 RTDYSG-RGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVD------------- 275
Query: 213 GCLYSSGRPICPALGIAWANCVNSRLFLSR 242
G + P P G A+ +RL+L +
Sbjct: 276 GAAMFAADPKKPIGGNIIAHASTTRLYLRK 305
>gi|300708611|ref|XP_002996481.1| hypothetical protein NCER_100414 [Nosema ceranae BRL01]
gi|239605787|gb|EEQ82810.1| hypothetical protein NCER_100414 [Nosema ceranae BRL01]
Length = 332
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GG SITE+ E +GKTQ C + ++ QLP GG S ++Y+ T
Sbjct: 95 TTGSSELDKLLNGGFESGSITEVFGEFRTGKTQLCHTVAVTCQLPPEQGGASGKAMYIDT 154
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R+ ++ + N + + I ++ D ++ + + + S S
Sbjct: 155 EGTFRSERIFPIAERY-GLNPEDVLENISYARAYNSDHQSQLLVQASALMSTSKYS---- 209
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+++IDS AL+R+DF +L R + L +A + +AV++TNQVV
Sbjct: 210 -VLIIDSATALYRTDFSG-RGELGARQISLARYLRDLVNLAETYQVAVIITNQVV 262
>gi|18389304|dbj|BAB84121.1| OsDmc1 protein [Oryza sativa Japonica Group]
Length = 344
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 123/297 (41%), Gaps = 52/297 (17%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT +LL + + T G +D LGGGI ITE E SGKTQ L +S QL
Sbjct: 93 MTGSDLLIKRKSVVRITTGSQALDELLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 153 PIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P R +++DS+ ALFR DF +L +R ++ L +A
Sbjct: 213 LAAKM---------AEEPFRPLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIA 262
Query: 182 VGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLS 241
F +AV +TNQV+ +P G+ + +L PA G A+ RL L
Sbjct: 263 EEFNVAVYITNQVI--ADPG---GGMFITDLK---------KPAGGHVLAHAATIRLMLR 308
Query: 242 RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVF 298
+ + E VC+ + AP+L + F++T G+
Sbjct: 309 KGK------------------GEQRVCK-------IFDAPNLPEGEAVFQVTSGGIM 340
>gi|302500272|ref|XP_003012130.1| DNA repair protein (Rad57), putative [Arthroderma benhamiae CBS
112371]
gi|291175686|gb|EFE31490.1| DNA repair protein (Rad57), putative [Arthroderma benhamiae CBS
112371]
Length = 599
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 105/197 (53%), Gaps = 13/197 (6%)
Query: 10 LLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHG 69
+L P+T + T+ PI+D L GGI +TE+ ESG+GKTQF L L LS QLP+ H
Sbjct: 110 VLHPPVTGQISTLD-PILDSALSGGISTGYLTEVTGESGAGKTQFLLHLLLSVQLPAPH- 167
Query: 70 GLSASSLYLHTEFPFPMRRL------HQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIM 123
GLS ++LY+ TE RL HQ P D I+ SV +VD L+
Sbjct: 168 GLSKNALYISTESDLATNRLSQLINEHQTLQALHPETPRPSLDNIY--SVTTVD--LESQ 223
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFD-NTMDDLKKRSFLFFKISGMLKAMAV 182
I ++ + SR I +I+IDSI A +R++ ++ L +RS K+ L+ +AV
Sbjct: 224 EHIINYQIPVAISRYNIGIIIIDSITANYRAESSTESVSGLLERSGQLKKLGHFLRTLAV 283
Query: 183 GFGLAVLVTNQVVDLME 199
+AV+V NQ+ D E
Sbjct: 284 THNIAVVVANQISDSFE 300
>gi|1066001|dbj|BAA09932.1| HsLim15 [Homo sapiens]
Length = 340
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFID 160
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + DH+P D + ++ + ++++ + + +
Sbjct: 161 TENTFRPDRLRDIADRF--NVDHDPVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGI-- 216
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 217 -FKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 271
>gi|448087220|ref|XP_004196277.1| Piso0_005731 [Millerozyma farinosa CBS 7064]
gi|359377699|emb|CCE86082.1| Piso0_005731 [Millerozyma farinosa CBS 7064]
Length = 294
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 9/191 (4%)
Query: 4 PMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQ 63
P T Q L N + + G +D LGGGI S+TE+ E GKTQ C L ++AQ
Sbjct: 43 PATIQAELRNRAYS--ISTGSNQLDDVLGGGIMSMSLTEVFGEFRCGKTQLCHTLCVTAQ 100
Query: 64 LPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIM 123
LP S GG Y+ TE F R+ ++ F D + + ++++S Q ++
Sbjct: 101 LPRSMGGAEGKVAYIDTEGTFRPDRIRAIAERFEVDPDACLENISYARALNSEHQ-TELS 159
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
++ + + S RL+++DSI ALFR D+ + ++ L +S +++ +A
Sbjct: 160 EQLGVQLADGS-----YRLLIVDSIMALFRVDYSGRGELNDRQQKLNQHLSALIR-LAED 213
Query: 184 FGLAVLVTNQV 194
+ +AV +TNQV
Sbjct: 214 YNVAVFLTNQV 224
>gi|351707390|gb|EHB10309.1| DNA repair protein RAD51-like protein 1 [Heterocephalus glaber]
Length = 336
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 33 GGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQL 92
GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+ TE F RL +
Sbjct: 112 GGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAV 171
Query: 93 SHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALF 152
+ + S + D + + D ++ + + + S + L+++DS AL+
Sbjct: 172 AERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYA-----LLIVDSATALY 225
Query: 153 RSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNL 212
R+D+ +L R + ML +A FG+AV++TNQVV ++
Sbjct: 226 RTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVD------------- 271
Query: 213 GCLYSSGRPICPALGIAWANCVNSRLFLSR 242
G S P P G A+ +RL+L +
Sbjct: 272 GAAMFSADPKKPIGGNIIAHASTTRLYLRK 301
>gi|302658072|ref|XP_003020745.1| DNA repair protein (Rad57), putative [Trichophyton verrucosum HKI
0517]
gi|291184605|gb|EFE40127.1| DNA repair protein (Rad57), putative [Trichophyton verrucosum HKI
0517]
Length = 600
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 105/197 (53%), Gaps = 13/197 (6%)
Query: 10 LLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHG 69
+L P+T + T+ PI+D L GGI +TE+ ESG+GKTQF L L LS QLP+ H
Sbjct: 111 VLHPPVTGQISTLD-PILDSALSGGISTGYLTEVTGESGAGKTQFLLHLLLSVQLPAPH- 168
Query: 70 GLSASSLYLHTEFPFPMRRL------HQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIM 123
GLS ++LY+ TE RL HQ P D I+ SV +VD L+
Sbjct: 169 GLSKNALYISTESDLATNRLSQLINEHQTLQALHPETPRPSLDNIY--SVTTVD--LESQ 224
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFD-NTMDDLKKRSFLFFKISGMLKAMAV 182
I ++ + SR I +I+IDSI A +R++ ++ L +RS K+ L+ +AV
Sbjct: 225 EHIINYQVPVAISRYNIGIIIIDSITANYRAESSTESVSGLLERSGQLKKLGHFLRTLAV 284
Query: 183 GFGLAVLVTNQVVDLME 199
+AV+V NQ+ D E
Sbjct: 285 THNIAVVVANQISDGFE 301
>gi|281204720|gb|EFA78915.1| putative DNA repair protein [Polysphondylium pallidum PN500]
Length = 350
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 7/174 (4%)
Query: 22 VGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTE 81
G +D L GG SITE+ E +GKTQ C L ++ QL + GG +LY+ TE
Sbjct: 115 TGSKELDSLLEGGFETGSITEIFGEFRTGKTQICHTLCVTCQLTLAQGGGEGRALYIDTE 174
Query: 82 FPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIR 141
F RL ++ + + +H D + ++ D + ++ + + + S SR
Sbjct: 175 GTFRPERLLAIAERYNLNGEH-VLDNVAYARAYNSDHQMQLLVQASAMM---SESRYI-- 228
Query: 142 LIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+D+ +L R + L+ +A FG+AV++TNQVV
Sbjct: 229 LLIVDSATSLYRTDYSG-RGELSDRQRHLARFLRALQRLADEFGVAVVITNQVV 281
>gi|258570589|ref|XP_002544098.1| predicted protein [Uncinocarpus reesii 1704]
gi|237904368|gb|EEP78769.1| predicted protein [Uncinocarpus reesii 1704]
Length = 574
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 96/186 (51%), Gaps = 22/186 (11%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P++D L GGI + +TE+ ESGSGKTQ L L LS QLP + GL +LY+ TE
Sbjct: 111 PVLDDALSGGISTSYVTEIAGESGSGKTQLLLHLLLSVQLPPPY-GLCKRALYVSTEAGL 169
Query: 85 PMRRLHQL-----------SHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNS 133
RL Q+ + RPS D+ V + +VD L+ I +
Sbjct: 170 ATNRLSQILDEHPRLSSLPTDVERPSLDN-------VLGITTVD--LETQDHILNHHLPF 220
Query: 134 SNSRLPIRLIVIDSIAALFRSD-FDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTN 192
+ S+ I L+VIDSI A +R + N L R++ F K+ +L+ +AV +A++V+N
Sbjct: 221 AISKYDIGLVVIDSITANYRVETTTNNFSGLLDRAWQFKKLGQLLRNLAVRHNIAIVVSN 280
Query: 193 QVVDLM 198
QV D +
Sbjct: 281 QVSDRL 286
>gi|408405119|ref|YP_006863102.1| DNA repair and recombination protein [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408365715|gb|AFU59445.1| DNA repair and recombination protein [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 276
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 95/181 (52%), Gaps = 15/181 (8%)
Query: 18 EKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLY 77
++ + G D LGGG+ ++TE+ E G+GKTQ C L + Q GGL A +LY
Sbjct: 39 DRISTGSKSFDDLLGGGLETKAVTEVYGEFGTGKTQLCHTLCVMVQQSRLAGGLDAKALY 98
Query: 78 LHTEFPFPMRRLHQLSHT--FRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSN 135
+ TE F R+ ++ F P + I ++ +S Q L I+ + + I+++S
Sbjct: 99 IDTENTFRPERIVSIAEARGFDPRKSLE--NVIVAKAYNSAHQEL-IIEEAGAVIEDNS- 154
Query: 136 SRLPIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQ 193
IRLIV+DS A +R++F T+ + ++R F I L +A + +AV++TNQ
Sbjct: 155 ----IRLIVVDSAVAHYRAEFLGRATLSERQQRLNKFMHI---LVRIAETYEVAVVLTNQ 207
Query: 194 V 194
+
Sbjct: 208 I 208
>gi|449265652|gb|EMC76815.1| Meiotic recombination protein DMC1/LIM15 like protein, partial
[Columba livia]
Length = 346
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 89/176 (50%), Gaps = 7/176 (3%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G D+ LGGGI +ITE E +GKTQ L ++AQLP S+G +++ T
Sbjct: 108 TTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGSNGYTGGKIIFIDT 167
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
E F RL ++ F + DH+ D + ++ + ++++ + + +
Sbjct: 168 ENTFRPDRLRDIADRF--NVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG---I 222
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 223 FKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 277
>gi|171680227|ref|XP_001905059.1| hypothetical protein [Podospora anserina S mat+]
gi|170939740|emb|CAP64966.1| unnamed protein product [Podospora anserina S mat+]
Length = 348
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI S+TE+ E +GK+Q C L ++ QLP GG +Y+ T
Sbjct: 104 TTGSKNLDTLLAGGIETGSVTEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCMYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ + S + D + ++ D L ++ + + + + S
Sbjct: 164 EGTFRPVRLLAVANRYGLSGEE-VLDNVAYARAYNSDHQLQLLNQAAAMMCETRFS---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 219 -LLIVDSATSLYRTDFLG-RGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVV 271
>gi|407926554|gb|EKG19521.1| ATPase AAA+ type core [Macrophomina phaseolina MS6]
Length = 326
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 82 TTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 141
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ + S + D + ++ D L ++ + + + S
Sbjct: 142 EGTFRPVRLLAVANRYGLSGEE-VLDNVAYARAYNSDHQLQLLQQASQMMTETRFS---- 196
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+DF +L R K L+ +A FG+AV++TNQVV
Sbjct: 197 -LLIVDSATSLYRTDFAG-RGELSARQVHLAKFMRTLQRLADEFGIAVVITNQVV 249
>gi|146102147|ref|XP_001469294.1| RAD51/dmc1 protein [Leishmania infantum JPCM5]
gi|398023821|ref|XP_003865072.1| RAD51/dmc1 protein [Leishmania donovani]
gi|134073663|emb|CAM72400.1| RAD51/dmc1 protein [Leishmania infantum JPCM5]
gi|322503308|emb|CBZ38393.1| RAD51/dmc1 protein [Leishmania donovani]
Length = 287
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGG-IPCNSITELVAESGSGKTQFCLQLTLSAQ 63
+T + L T + + G +D+ LGGG I SITE E +GKTQ L ++ Q
Sbjct: 34 ITGSSCLQQRSTILRISTGSVALDQLLGGGGIESRSITEAFGEFRTGKTQIGHTLCVTCQ 93
Query: 64 LPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIM 123
LP GG + ++Y+ TE F R+ ++ F + ++ D I V ++ + ++
Sbjct: 94 LPLEMGGGNGKAVYVDTEGTFRPERIRPIAERF-GMDSNSVLDNILVARAYTHEHQAHLL 152
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
+ + + S L+V+DSI ALFR DF +L +R K+ L +A
Sbjct: 153 SMVAAKMAEDQFS-----LLVVDSITALFRVDFSGR-GELAERQQKLAKMLSQLMKIAEE 206
Query: 184 FGLAVLVTNQVV 195
F +AV +TNQVV
Sbjct: 207 FNIAVYITNQVV 218
>gi|2696694|dbj|BAA23984.1| SpDmc1 [Schizosaccharomyces pombe]
Length = 336
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 86/189 (45%), Gaps = 6/189 (3%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T + N + G ++ LGGGI SITE+ E GKTQ L ++AQLP
Sbjct: 85 TAMEISQNRKKVWSISTGSEALNGILGGGIQSMSITEVFGEFRCGKTQMSHTLCVTAQLP 144
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GG ++ TE F R+ ++ F D + I V ++ +Q ++ + K
Sbjct: 145 RDMGGAEGKVAFIDTEGTFRPDRIKAIAERFGVDADQ-AMENIIVSRAYNSEQQMEYITK 203
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ + RL+++DSI ALFR D+ +L +R + L ++ F
Sbjct: 204 LGTIFAEDGQ----YRLLIVDSIMALFRVDYSGR-GELSERQKKLNIMLARLNHISEEFN 258
Query: 186 LAVLVTNQV 194
+AV VTNQV
Sbjct: 259 VAVFVTNQV 267
>gi|302496969|ref|XP_003010485.1| hypothetical protein ARB_03186 [Arthroderma benhamiae CBS 112371]
gi|291174028|gb|EFE29845.1| hypothetical protein ARB_03186 [Arthroderma benhamiae CBS 112371]
Length = 257
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 12 TTGSKQLDTLLAGGIETGSITELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 71
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D L ++ + + + S
Sbjct: 72 EGTFRPVRLLAVAQRYGLVGEE-VLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 126
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+DF +L R + L+ +A FG+AV++TNQVV
Sbjct: 127 -LLIVDSATSLYRTDFSG-RGELSSRQNHLARFMRTLQRLADEFGVAVVITNQVV 179
>gi|448731443|ref|ZP_21713743.1| DNA repair and recombination protein RadA [Halococcus
saccharolyticus DSM 5350]
gi|445792196|gb|EMA42808.1| DNA repair and recombination protein RadA [Halococcus
saccharolyticus DSM 5350]
Length = 344
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 129/327 (39%), Gaps = 79/327 (24%)
Query: 1 MGAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTL 60
+G T N+L+ K + +D LGGG+ SITE+ E G+GK+Q QL++
Sbjct: 64 IGGFETGANVLERRNEIGKLSWQVDEVDDLLGGGVETQSITEVYGEFGAGKSQVTHQLSV 123
Query: 61 SAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFV---------- 110
+ QLP +GGL S++++ +E F R+ Q+ P + I
Sbjct: 124 NVQLPKEYGGLEGSAIFIDSEDTFRPERIAQMVRGL-------PDEAIAAALEAREIEGG 176
Query: 111 -QSVHSVDQLLD-------------------IMPKIESFIKNSSNSRLPIRLIVIDSIAA 150
+S ++DQL++ + K + +S P+RL+ IDS+ A
Sbjct: 177 PESEDAMDQLIESVLDNIHVAKAFNSNHQILLAQKAQDIASEHEDSEWPVRLVCIDSLTA 236
Query: 151 LFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVG 210
FR+++ + ++ L + + K + + A +VTNQV
Sbjct: 237 HFRAEYVGRGELASRQQKLNKHLHDIDKVGNL-YNAATVVTNQV--------------AS 281
Query: 211 NLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRR 270
N + G P P G + R++L + +
Sbjct: 282 NPDSYF--GDPTQPIGGNILGHKSTFRMYLRK-------------------------SKG 314
Query: 271 TRRSLHVVFAPHLADTSCEFEITREGV 297
T+R + +V AP+LAD + EG+
Sbjct: 315 TKRIVRLVDAPNLADGEAVMRVEEEGL 341
>gi|346703397|emb|CBX25494.1| hypothetical_protein [Oryza glaberrima]
Length = 397
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 90/194 (46%), Gaps = 13/194 (6%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
MT +LL + + T G +D LGGGI ITE E SGKTQ L +S QL
Sbjct: 93 MTGSDLLIKRKSVVRITTGSQALDELLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 153 PIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P RL+++DS+ ALFR DF +L +R ++ L +A
Sbjct: 213 LAAKM---------AEEPFRLLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIA 262
Query: 182 VGFGLAVLVTNQVV 195
F +AV +TNQ V
Sbjct: 263 EEFNVAVYITNQGV 276
>gi|27696723|gb|AAH43073.1| Xrcc3 protein [Mus musculus]
Length = 215
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%)
Query: 14 PLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSA 73
P ++ ++GCP++D+ LGGG+P IT L S +GKTQ LQL L+ Q P +GGL A
Sbjct: 76 PEQHQRLSLGCPVLDQFLGGGLPLEGITGLAGCSSAGKTQLALQLCLAVQFPRQYGGLEA 135
Query: 74 SSLYLHTEFPFPMRRLHQL 92
++Y+ TE FP +RL QL
Sbjct: 136 GAVYICTEDAFPSKRLWQL 154
>gi|340503751|gb|EGR30280.1| meiotic recombination protein dmc1, putative [Ichthyophthirius
multifiliis]
Length = 318
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 122/284 (42%), Gaps = 48/284 (16%)
Query: 16 TTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASS 75
+ ++ + G ++ L GGI SITE E +GKTQ L + AQL +H
Sbjct: 78 SIKRISTGSKSLNEILNGGIESQSITEFYGEYRTGKTQIVHTLCVLAQL-ENHCSQPGKI 136
Query: 76 LYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSN 135
LY+ TE F R+ Q++ +F + I ++VDQ + ++ K + + +N
Sbjct: 137 LYIDTEGTFRPERVCQIA-SFYGIEGEEALNNIVYGRAYTVDQQMILLTKSAAIMVEENN 195
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
LI++DSI A FR DF +L +R K L+ +A F +AV++TNQV
Sbjct: 196 ----FALIIVDSIMANFRCDFSGR-GELSERQQSLGKFLSRLQRVAAEFNVAVVITNQV- 249
Query: 196 DLMEPNEGVNGLRVGNLGCLYSSGRPICPAL--GIAWANCVNSRLFLSRNEDFVVRENQM 253
+ +P+ G+ G G P P G A+ RLF+ + D +
Sbjct: 250 -MADPSGGMAG------------GAPPQPKPIGGHILAHSSTQRLFMRKKNDNI------ 290
Query: 254 VNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGV 297
R + +V +P+L D + ++ +G+
Sbjct: 291 -------------------RKIKLVDSPYLQDKEVDITVSDKGI 315
>gi|302698277|ref|XP_003038817.1| RecA family ATPase [Schizophyllum commune H4-8]
gi|300112514|gb|EFJ03915.1| RecA family ATPase, partial [Schizophyllum commune H4-8]
Length = 348
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 6/175 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
+ G +D LGGGI SI+E+ E +GKTQ +++ AQLP GG S Y+
Sbjct: 111 ISTGSKAVDGILGGGIMSQSISEVYGEFRTGKTQLAHTMSVVAQLPPDLGGASGKVAYID 170
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
TE F R+ ++ F + ++ ++ +S Q+ I F ++
Sbjct: 171 TEGTFRPDRIKSIAERFGVDGSMALENILYARAFNSEHQMELINECSSRFAEDKD----- 225
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
RL+++DSI ALFR D+ +L +R ++ L ++ + +A+L+TNQV
Sbjct: 226 FRLLIVDSIMALFRVDYSGR-GELSERQQKLAQMLSKLTKLSEEYNIAILLTNQV 279
>gi|401430004|ref|XP_003879484.1| RAD51/dmc1 protein [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322495734|emb|CBZ31040.1| RAD51/dmc1 protein [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 358
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGG-IPCNSITELVAESGSGKTQFCLQLTLSAQ 63
+T + L T + + G +D+ LGGG I SITE E +GKTQ L ++ Q
Sbjct: 105 ITGSSCLQQRSTILRISTGSTALDQLLGGGGIESRSITEAFGEFRTGKTQIGHTLCVTCQ 164
Query: 64 LPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIM 123
LP GG + ++Y+ TE F R+ ++ F + ++ D I V ++ + ++
Sbjct: 165 LPLEMGGGNGKAVYVDTEGTFRPERIRPIAERF-GMDSNSVLDNILVARAYTHEHQAHLL 223
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
+ + + S L+V+DSI ALFR DF +L +R K+ L +A
Sbjct: 224 SMVAAKMAEDQFS-----LLVVDSITALFRVDFSGR-GELAERQQKLAKMLSQLIKIAEE 277
Query: 184 FGLAVLVTNQVV 195
F +AV +TNQVV
Sbjct: 278 FNIAVYITNQVV 289
>gi|296815918|ref|XP_002848296.1| DNA repair protein RAD51 [Arthroderma otae CBS 113480]
gi|238841321|gb|EEQ30983.1| DNA repair protein RAD51 [Arthroderma otae CBS 113480]
Length = 350
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 105 TTGSKQLDTLLAGGIETGSITELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 164
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D L ++ + + + S
Sbjct: 165 EGTFRPVRLLAVAQRYGLVGEE-VLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 219
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+DF +L R + L+ +A FG+AV++TNQVV
Sbjct: 220 -LLIVDSATSLYRTDFSG-RGELSSRQNHLARFMRTLQRLADEFGVAVVITNQVV 272
>gi|326479127|gb|EGE03137.1| DNA repair protein [Trichophyton equinum CBS 127.97]
Length = 604
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 107/197 (54%), Gaps = 13/197 (6%)
Query: 10 LLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHG 69
+L P+T + T+ PI+D L GGI +TE+ ESG+GKTQF L L LS QLP+ H
Sbjct: 111 VLHPPVTGQISTLD-PILDSALSGGISTGYLTEVTGESGAGKTQFLLHLLLSVQLPAPH- 168
Query: 70 GLSASSLYLHTEFPFPMRRLHQLSHTFR------PSNDHNPCDYIFVQSVHSVDQLLDIM 123
GLS ++LY+ TE RL QL + R P D I+ SV +VD L+
Sbjct: 169 GLSKNALYISTESDLATNRLSQLINEHRTLQALHPETPRPSLDNIY--SVTTVD--LESQ 224
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFD-NTMDDLKKRSFLFFKISGMLKAMAV 182
I ++ + SR I +I+IDSI A +R++ ++ L +RS K+ L+ +AV
Sbjct: 225 EHIINYQIPVAISRYNIGIIIIDSITANYRAESSTESVSGLLERSGQLKKLGHFLRTLAV 284
Query: 183 GFGLAVLVTNQVVDLME 199
+AV+V NQ+ D E
Sbjct: 285 THNIAVVVANQISDGFE 301
>gi|327299920|ref|XP_003234653.1| DNA repair protein RAD51 [Trichophyton rubrum CBS 118892]
gi|326463547|gb|EGD89000.1| DNA repair protein RAD51 [Trichophyton rubrum CBS 118892]
Length = 349
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 104 TTGSKQLDTLLAGGIETGSITELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D L ++ + + + S
Sbjct: 164 EGTFRPVRLLAVAQRYGLVGEE-VLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+DF +L R + L+ +A FG+AV++TNQVV
Sbjct: 219 -LLIVDSATSLYRTDFSG-RGELSSRQNHLARFMRTLQRLADEFGVAVVITNQVV 271
>gi|389595323|ref|XP_003722884.1| RAD51/dmc1 protein [Leishmania major strain Friedlin]
gi|3132711|gb|AAC16335.1| Dmc1 homolog [Leishmania major]
gi|323364112|emb|CBZ13119.1| RAD51/dmc1 protein [Leishmania major strain Friedlin]
Length = 364
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGG-IPCNSITELVAESGSGKTQFCLQLTLSAQ 63
+T + L T + + G +D+ LGGG I SITE E +GKTQ L ++ Q
Sbjct: 111 ITGSSCLQQRSTLLRISTGSTALDQLLGGGGIESRSITEAFGEFRTGKTQIGHTLCVTCQ 170
Query: 64 LPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIM 123
LP GG + ++Y+ TE F R+ ++ F + ++ D I V ++ + ++
Sbjct: 171 LPLEMGGGNGKAVYVDTEGTFRPERIRPIAERF-GMDSNSVLDNILVARAYTHEHQAHLL 229
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
+ + + S L+V+DSI ALFR DF +L +R K+ L +A
Sbjct: 230 SMVAAKMAEDQFS-----LLVVDSITALFRVDFSGR-GELAERQQKLAKMLSQLIKIAEE 283
Query: 184 FGLAVLVTNQVV 195
F +AV +TNQVV
Sbjct: 284 FNIAVYITNQVV 295
>gi|19115078|ref|NP_594166.1| RecA family ATPase Dmc1 [Schizosaccharomyces pombe 972h-]
gi|12644064|sp|O42634.2|DMC1_SCHPO RecName: Full=Meiotic recombination protein dmc1
gi|2887332|emb|CAA17024.1| RecA family ATPase Dmc1 [Schizosaccharomyces pombe]
gi|3176384|dbj|BAA28671.1| dmc1 [Schizosaccharomyces pombe]
Length = 332
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 86/189 (45%), Gaps = 6/189 (3%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T + N + G ++ LGGGI SITE+ E GKTQ L ++AQLP
Sbjct: 81 TAMEISQNRKKVWSISTGSEALNGILGGGIQSMSITEVFGEFRCGKTQMSHTLCVTAQLP 140
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GG ++ TE F R+ ++ F D + I V ++ +Q ++ + K
Sbjct: 141 RDMGGAEGKVAFIDTEGTFRPDRIKAIAERFGVDADQ-AMENIIVSRAYNSEQQMEYITK 199
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ + RL+++DSI ALFR D+ +L +R + L ++ F
Sbjct: 200 LGTIFAEDGQ----YRLLIVDSIMALFRVDYSGR-GELSERQQKLNIMLARLNHISEEFN 254
Query: 186 LAVLVTNQV 194
+AV VTNQV
Sbjct: 255 VAVFVTNQV 263
>gi|315053028|ref|XP_003175888.1| DNA repair protein RAD51 [Arthroderma gypseum CBS 118893]
gi|311341203|gb|EFR00406.1| DNA repair protein RAD51 [Arthroderma gypseum CBS 118893]
Length = 349
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 104 TTGSKQLDTLLAGGIETGSITELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D L ++ + + + S
Sbjct: 164 EGTFRPVRLLAVAQRYGLVGEE-VLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+DF +L R + L+ +A FG+AV++TNQVV
Sbjct: 219 -LLIVDSATSLYRTDFSG-RGELSSRQNHLARFMRTLQRLADEFGVAVVITNQVV 271
>gi|326476219|gb|EGE00229.1| DNA repair protein RAD51 [Trichophyton tonsurans CBS 112818]
gi|326480838|gb|EGE04848.1| DNA repair protein RAD51 [Trichophyton equinum CBS 127.97]
Length = 349
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 104 TTGSKQLDTLLAGGIETGSITELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D L ++ + + + S
Sbjct: 164 EGTFRPVRLLAVAQRYGLVGEE-VLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 218
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+DF +L R + L+ +A FG+AV++TNQVV
Sbjct: 219 -LLIVDSATSLYRTDFSG-RGELSSRQNHLARFMRTLQRLADEFGVAVVITNQVV 271
>gi|429963383|gb|ELA42927.1| DNA repair protein RAD51 [Vittaforma corneae ATCC 50505]
Length = 331
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 9/181 (4%)
Query: 17 TEKCTV--GCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSAS 74
TE C V G +D+ L GGI SITE+ E +GKTQ C + +S QLP +GG +
Sbjct: 88 TEVCYVSTGSVELDKLLHGGIESGSITEIFGEFRTGKTQLCHTIAVSCQLPVENGGGAGK 147
Query: 75 SLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSS 134
+Y+ TE F RL ++ + D + I ++ D +++ + + +
Sbjct: 148 CIYIDTEGTFRSERLIPIAERLGLNPD-TVLENISYARAYNSDHQNNLLIHASAMMSENK 206
Query: 135 NSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
+ ++++DS AL+R+D+ N +L R + L +A +G+AV++TNQV
Sbjct: 207 YA-----VLIVDSATALYRTDY-NGRGELGARQIHLARFLRTLTNLAETYGVAVVITNQV 260
Query: 195 V 195
V
Sbjct: 261 V 261
>gi|331239939|ref|XP_003332621.1| DNA repair protein RAD51 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309311611|gb|EFP88202.1| DNA repair protein RAD51 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 343
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITE E +GK+Q C L +S QLP++ GG +++ T
Sbjct: 106 TTGSKNLDTMLGGGIDTQSITEFYGEFRTGKSQLCHHLAVSCQLPANMGGGEGKCMFIDT 165
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R+ ++ + + + I V ++ D ++ + + + SR I
Sbjct: 166 EGTFRPERILAIAERY-GMDGEEVLNNIAVARAYNSDHQSQLLREASRLM---TLSRFAI 221
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+++DS AL+R+D+ + +++ L + G L +A FG+AV+VTNQV+
Sbjct: 222 --LIVDSATALYRTDYSGRGELADRQAHLAKFLRGCL-GLAEQFGIAVVVTNQVM 273
>gi|13541288|ref|NP_110976.1| DNA repair and recombination protein RadA [Thermoplasma volcanium
GSS1]
gi|20139594|sp|Q97BJ9.1|RADA_THEVO RecName: Full=DNA repair and recombination protein RadA
gi|14324671|dbj|BAB59598.1| cell cycle progression protein DMC1 [Thermoplasma volcanium GSS1]
Length = 323
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 7/189 (3%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T + +L+ T +K T G +D LGGG+ +ITE E GSGKTQ QL ++ +P
Sbjct: 76 TGEEILERRKTIQKLTTGSKNLDDLLGGGLETQAITEFFGEFGSGKTQIMHQLAVNCTMP 135
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GG + + + TE F R+ Q++ + D ++ +S Q+L + K
Sbjct: 136 KEKGGFDSDVMMIDTENTFRPERIIQMAKSKGLDPDETLKRIHVARAYNSHHQIL-LAEK 194
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ K IRL+++DS+ A FRS++ +++ L + +L+ + +
Sbjct: 195 AQETAK-----EFNIRLLIVDSLTAHFRSEYVGRGSLAERQQLLNKHMHDLLRFGTI-YN 248
Query: 186 LAVLVTNQV 194
+ VTNQV
Sbjct: 249 AVIAVTNQV 257
>gi|255552035|ref|XP_002517062.1| meiotic recombination protein dmc1, putative [Ricinus communis]
gi|223543697|gb|EEF45225.1| meiotic recombination protein dmc1, putative [Ricinus communis]
Length = 353
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 90/189 (47%), Gaps = 15/189 (7%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D LGGGI ITE E SGKTQ L +S QLP++ G + Y+
Sbjct: 107 RITTGSQALDELLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYI 166
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLDIMPKIESFIKNSSN 135
TE F R+ ++ F + I+ ++ H + LL + K+
Sbjct: 167 DTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKM--------- 217
Query: 136 SRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
S P RL+++DS+ ALFR DF +L +R ++ L +A F +AV +TNQV+
Sbjct: 218 SEEPFRLLIVDSVIALFRVDFTGR-GELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVI 276
Query: 196 DLMEPNEGV 204
+P GV
Sbjct: 277 --ADPGGGV 283
>gi|449527239|ref|XP_004170620.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Cucumis
sativus]
Length = 379
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 112/233 (48%), Gaps = 29/233 (12%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GGIP +TELV +G GKTQFCL+L+ A LP S+GGL +Y+ E F
Sbjct: 91 LDEALFGGIPFGVLTELVGPAGIGKTQFCLKLSFLAALPPSYGGLDGRVIYIDVESKFSS 150
Query: 87 RRLHQLS---------HTF-----RPSNDHNPCDYIFVQSVHSVDQLLDIMPKIE-SFIK 131
+R + S +F + I V S+ + + + KI+ S ++
Sbjct: 151 KRYFKYSIDVLVKFGMRSFPDVFNKKDMAQEMAGRILVLRPASLSEFTESLHKIKVSLLE 210
Query: 132 NSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVT 191
++L++IDS+AAL +++ + K+ S L + IS +K++A + V+VT
Sbjct: 211 QE------VKLVIIDSMAALITGEYE--LGAPKQHS-LGWHIS-FIKSIAEFARIPVVVT 260
Query: 192 NQVVDLMEPNEGVNGLRVGNLG-CL-YSS--GRPICPALGIAWANCVNSRLFL 240
NQV + + C YSS G I ALG+ WA+ V RL L
Sbjct: 261 NQVRSRNRKEVSHYSFQGWSRSECQEYSSGYGSHIVAALGVHWAHSVTIRLVL 313
>gi|397638534|gb|EJK73108.1| hypothetical protein THAOC_05289, partial [Thalassiosira oceanica]
Length = 385
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 124/317 (39%), Gaps = 74/317 (23%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFP- 85
+D LGGG+ +TE+V GSGKTQ +QL + A+LPS +GG+ S + + E +
Sbjct: 97 LDVLLGGGVALAELTEIVGRPGSGKTQLTMQLCVDARLPSKYGGVEGSVVVIDAEGSWSC 156
Query: 86 --MRRLHQLSHTF-------------------------RPSNDHNP---------CDYIF 109
M RL +S N+ N + I
Sbjct: 157 SGMDRLWDMSVALVDHLRGSAARRVAAKNAMEGRADVPASENEINSLVSLTPESLLEGIH 216
Query: 110 VQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFL 169
+ VH + + F+ + +P++L+VIDS+A +R + S
Sbjct: 217 IFRVHDEPSQTSTLYSLPKFLLKQEEAGIPVKLVVIDSLAFHYRVASSAAAGSGQSNSLS 276
Query: 170 ----FFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPA 225
+++ L MA F LAV+ N + ++ + NG S + PA
Sbjct: 277 TTHNLTRMAAFLTDMANEFDLAVVAINHLTTRIDKDSNSNG----------GSNTKLVPA 326
Query: 226 LGIAWANCVNSRLFLS--RNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHL 283
LG +WA+ V SRL + R+ F + E RS+ ++ +PH
Sbjct: 327 LGESWAHSVTSRLMIDHYRHPQFDMNE---------------------VRSVSLLKSPHK 365
Query: 284 ADTSCEFEITREGVFGV 300
+ IT +G+ GV
Sbjct: 366 PPGTALLLITEKGIRGV 382
>gi|448082658|ref|XP_004195184.1| Piso0_005731 [Millerozyma farinosa CBS 7064]
gi|359376606|emb|CCE87188.1| Piso0_005731 [Millerozyma farinosa CBS 7064]
Length = 322
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 117/248 (47%), Gaps = 23/248 (9%)
Query: 4 PMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQ 63
P T Q L N + + G +D LGGGI S+TE+ E GKTQ C L ++AQ
Sbjct: 71 PATIQAELRNRAYS--ISTGSNQLDDVLGGGIMSMSLTEVFGEFRCGKTQLCHTLCVTAQ 128
Query: 64 LPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIM 123
LP S GG Y+ TE F R+ ++ F D + + ++++S Q ++
Sbjct: 129 LPRSMGGAEGKVAYIDTEGTFRPDRIRAIAERFEVDPDACLENISYARALNSEHQ-TELS 187
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
++ + + S RL+++DSI ALFR D+ + ++ L +S +++ +A
Sbjct: 188 EQLGVQLADGS-----YRLLIVDSIMALFRVDYSGRGELNDRQQKLNQHLSALIR-LAED 241
Query: 184 FGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL--S 241
+ +AV +TNQV + + G + L++S P G A+ +R+ L
Sbjct: 242 YNVAVFLTNQV----QSDPGAS--------ALFASADGRKPVGGHILAHASATRILLRKG 289
Query: 242 RNEDFVVR 249
R E+ V +
Sbjct: 290 RGEERVAK 297
>gi|326469904|gb|EGD93913.1| hypothetical protein TESG_01443 [Trichophyton tonsurans CBS 112818]
Length = 612
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 107/197 (54%), Gaps = 13/197 (6%)
Query: 10 LLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHG 69
+L P+T + T+ PI+D L GGI +TE+ ESG+GKTQF L L LS QLP+ H
Sbjct: 111 VLHPPVTGQISTLD-PILDSALSGGISTGYLTEVTGESGAGKTQFLLHLLLSVQLPAPH- 168
Query: 70 GLSASSLYLHTEFPFPMRRLHQLSHTFR------PSNDHNPCDYIFVQSVHSVDQLLDIM 123
GLS ++LY+ TE RL QL + R P D I+ SV +VD L+
Sbjct: 169 GLSKNALYISTESDLATNRLSQLINEHRTLQALHPETPRPSLDNIY--SVTTVD--LESQ 224
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFD-NTMDDLKKRSFLFFKISGMLKAMAV 182
I ++ + SR I +I+IDSI A +R++ ++ L +RS K+ L+ +AV
Sbjct: 225 EHIINYQIPVAISRYNIGIIIIDSITANYRAESSTESVSGLLERSGQLKKLGHFLRTLAV 284
Query: 183 GFGLAVLVTNQVVDLME 199
+AV+V NQ+ D E
Sbjct: 285 THNIAVVVANQISDGFE 301
>gi|424513661|emb|CCO66283.1| RAD51C protein [Bathycoccus prasinos]
Length = 381
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 114/305 (37%), Gaps = 81/305 (26%)
Query: 24 CPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSS-HGGLSASSLYLHTEF 82
C +D LGGG+ ITE G GKTQ +QL +S QLP G +Y+ TE
Sbjct: 119 CAQVDGILGGGVQTGEITEFCGAPGVGKTQIGMQLAVSVQLPKEFFCGNEGECVYVDTEG 178
Query: 83 PFPMRRLHQLSHTFRPSNDH---------------------------NPCDYIFVQSVHS 115
F R ++ R + + I V H
Sbjct: 179 SFTCDRCEDMAIGARRKLEERVQEMRCSEEERREYEECLESNMFSVDSILKRIHVFRCHE 238
Query: 116 VDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISG 175
V +LL + + F+K ++L+V+DSIA FR DF DD+ R+ + K +
Sbjct: 239 VTELLACLDHMPEFVKEHPK----VKLVVVDSIAFHFRQDF----DDMALRASILAKTTN 290
Query: 176 MLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVN 235
L ++A LAV+ NQ G + PALG ++A+
Sbjct: 291 NLMSLAKKHELAVVTINQATT--------------------KPGGRLAPALGESYAHAAT 330
Query: 236 SRLFLSRNEDFVVRENQMVNGGVGGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITRE 295
+R+ LS E+ R +V +P LA+ + ITR+
Sbjct: 331 TRVALSWGEEGT-------------------------RIAYVAKSPRLANRKAMYTITRD 365
Query: 296 GVFGV 300
GV V
Sbjct: 366 GVRDV 370
>gi|4322492|gb|AAD16062.1| recombination/repair protein RadA [Halobacterium salinarum]
Length = 353
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 24/199 (12%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T P +D LGGG+ SITE+ E G+GK+Q QL ++ QLP+ +G L ++++
Sbjct: 91 KLTWNIPEVDDLLGGGVETQSITEVYGEFGAGKSQVTHQLAVNVQLPTEYGALHGRAVFI 150
Query: 79 HTEFPFPMRRLHQL--------------SHTFRPSNDHNPC---------DYIFVQSVHS 115
+E F R+ + +H S D D I V +
Sbjct: 151 DSEDTFRPERIDDMVRGLSDETLQAAMEAHEIEGSTDDEDTLTELVDAFLDKIHVAKGFN 210
Query: 116 VDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISG 175
+ + + K + + P+R++ +DS+ A FR+++ +L R K
Sbjct: 211 SNHQMLLAEKAKEIASEHEDGDWPVRMLTVDSLTAHFRAEYVG-RGELADRQQKLNKHLH 269
Query: 176 MLKAMAVGFGLAVLVTNQV 194
L+ + + AVLVTNQV
Sbjct: 270 DLEPVGDLYNAAVLVTNQV 288
>gi|378729398|gb|EHY55857.1| DNA repair protein rhp51 [Exophiala dermatitidis NIH/UT8656]
Length = 349
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +DR LGGG+ SITE+ E +GK+Q C + ++ QLP GG LY+ T
Sbjct: 106 TTGSKNLDRLLGGGVETGSITEIFGEFRTGKSQICHTMAVTCQLPFDMGGGEGKCLYIDT 165
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL +++ + + + + ++ +S QL + + +
Sbjct: 166 EGTFRPVRLLSVANRYGLEGEEVLDNVAYARAYNSEHQLQLLQQASQMMCETR------F 219
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+D+ N +L R K L+ +A FG+AV++TNQVV
Sbjct: 220 SLLIVDSATSLYRTDY-NGRGELSSRQSHMAKFLRTLQRLADEFGIAVVITNQVV 273
>gi|302660598|ref|XP_003021977.1| hypothetical protein TRV_03925 [Trichophyton verrucosum HKI 0517]
gi|291185899|gb|EFE41359.1| hypothetical protein TRV_03925 [Trichophyton verrucosum HKI 0517]
Length = 388
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 143 TTGSKQLDTLLAGGIETGSITELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDT 202
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D L ++ + + + S
Sbjct: 203 EGTFRPVRLLAVAQRYGLVGEEV-LDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 257
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+DF +L R + L+ +A FG+AV++TNQVV
Sbjct: 258 -LLIVDSATSLYRTDFSG-RGELSSRQNHLARFMRTLQRLADEFGVAVVITNQVV 310
>gi|365761557|gb|EHN03202.1| Rad57p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 448
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 29/253 (11%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T ID L GGI + ITE+ ES +GK+Q +QL LS QL + GGL+ +Y+ T
Sbjct: 88 TTADVAIDELLNGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEAEGGLAGKCVYITT 147
Query: 81 EFPFPMRRLHQLSHTFRPSNDH---NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSR 137
E P +RL + + RP+ + + + V ++Q I ++ ++ SR
Sbjct: 148 EGDLPTQRLESMLSS-RPAYEKLGISQSNIFTVNCNDLINQEHIINVQLPILLE---RSR 203
Query: 138 LPIRLIVIDSIAALFRSDFDN-TMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
I+L+++DSI+ R + N + + ++ K++ L+ +A + LAV+V NQV D
Sbjct: 204 GAIKLVIVDSISHHLRVELQNKSFRESQENKNYLDKMAEKLQILAHDYSLAVVVANQVGD 263
Query: 197 LMEPNEGVN------------GLRVG--NLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
N V G VG N LY R + LG N+ LS
Sbjct: 264 KPLVNSPVAHKAQVTDYDYQLGWLVGWRNSTILY---RQMYSMLG----GSPNNDEILSD 316
Query: 243 NEDFVVRENQMVN 255
+ED+++ E M N
Sbjct: 317 DEDYMLIEKMMEN 329
>gi|337743291|gb|AEI73142.1| DMC1 [Kryptolebias marmoratus]
Length = 265
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 9/187 (4%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP G L +++
Sbjct: 26 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGEDGYLGGKIIFID 85
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + DH+ D + ++ + ++++ + +
Sbjct: 86 TENTFRPDRLRDIADRF--NVDHDAVLDNVLYARAYTSEHQMELLDFVAAKFHEEGGV-- 141
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 142 -FKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT--A 197
Query: 199 EPNEGVN 205
+P G+
Sbjct: 198 DPGAGMT 204
>gi|426232984|ref|XP_004010497.1| PREDICTED: DNA repair protein RAD51 homolog 1 isoform 2 [Ovis
aries]
Length = 342
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 33 GGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQL 92
GGI SITE+ E +GKTQ C L ++ QLP GG ++Y+ TE F RL +
Sbjct: 118 GGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAV 177
Query: 93 SHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALF 152
+ + S + D + + D ++ + + + S + L+++DS AL+
Sbjct: 178 AERYGLSGS-DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYA-----LLIVDSATALY 231
Query: 153 RSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNL 212
R+D+ +L R + ML +A FG+AV++TNQVV ++
Sbjct: 232 RTDYSGR-GELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVD------------- 277
Query: 213 GCLYSSGRPICPALGIAWANCVNSRLFLSR 242
G + P P G A+ +RL+L +
Sbjct: 278 GAAMFAADPKKPIGGNIIAHASTTRLYLRK 307
>gi|46107922|ref|XP_381020.1| hypothetical protein FG00844.1 [Gibberella zeae PH-1]
Length = 445
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGG+P ++TE ESG+GKTQ L L L+ QLPS H GL +LY+ TE
Sbjct: 96 LDAILGGGVPVGAVTEFTGESGAGKTQALLSLCLAVQLPSPH-GLGREALYISTEATMAT 154
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQSVHS-VDQLLDIMPKIESFIKNSSNSRLPIRLIVI 145
RL Q+ + ++ D + ++HS + L+ I F SR I LI++
Sbjct: 155 SRLAQMLKSNPIIQQYDVDDRPSLDAIHSTITPDLETQDHILDFQVPVLLSRHRIGLIIL 214
Query: 146 DSIAALFRSDFDNT---MDDLKKRSFLFFKISGMLKAMA 181
DS+AA +R++F+ ++ RS ++ +L+ +A
Sbjct: 215 DSVAANYRAEFERQGTHGSNMAARSAELVRLGALLRDLA 253
>gi|301757528|ref|XP_002914594.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog
[Ailuropoda melanoleuca]
Length = 340
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYSGGKIIFID 160
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + DHN D + ++ + ++++ + + +
Sbjct: 161 TENTFRPDRLRDIADRF--NVDHNAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG--- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 216 IFKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 271
>gi|300797730|ref|NP_001178267.1| meiotic recombination protein DMC1/LIM15 homolog [Bos taurus]
gi|426225780|ref|XP_004007040.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog [Ovis
aries]
Length = 340
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYSGGKIIFID 160
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + DHN D + ++ + ++++ + + +
Sbjct: 161 TENTFRPDRLRDIADRF--NVDHNAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG--- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 216 IFKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 271
>gi|134117045|ref|XP_772749.1| hypothetical protein CNBK1230 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255367|gb|EAL18102.1| hypothetical protein CNBK1230 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 598
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 154/394 (39%), Gaps = 128/394 (32%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP---SSHGGLSASSLYLHTEFP 83
+D CLGGG+ + E+ ES +GK+ F L L L QL SS GG SL L +E
Sbjct: 105 LDECLGGGLRRGCLYEIAGESAAGKSHFALTLALCCQLSSLTSSPGG----SLILTSERE 160
Query: 84 FPMRRLHQLSHTF----------RPSNDHNP-----CDYIFVQSVHSVDQLLD----IMP 124
RL QL RP + +P D I V +D L ++P
Sbjct: 161 LSTDRLIQLGEPLLAVHEPRAEERPEGEIDPRVKGLLDNILSNRVSDIDALEHALSYVIP 220
Query: 125 K-IESFIKNSSNSRL----------PIRLIVIDSIAALFRSD---------FDNTMDDLK 164
+ES +K SS+S PIRLI++DS+ AL R + L
Sbjct: 221 ALLESRLKTSSSSSSQPFPSRSHLKPIRLIILDSLTALLRGGSASSPSTRPAATSSSSLT 280
Query: 165 KRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDL--------------------------- 197
+RS ++ +LKA+A + LAV+V NQV D+
Sbjct: 281 ERSKHLCVVADLLKALAARYDLAVVVINQVSDVFPRQQHSSSSGVVAAYSSPLMLAGTPP 340
Query: 198 ---------------MEPNEGVNGLRVGNLGCLYS------SGRPIC----PALGIAWAN 232
+ +G + G+ LY+ SG+ +LGI WAN
Sbjct: 341 SSAWDQTQPFGPGMAQQQQQGTSSASGGDPPMLYASQSRWFSGQSDVLNKEASLGIVWAN 400
Query: 233 CVNSRLFLSR--------NEDF--VVREN--------QMVNGGVGGSGSEDFVCRRTR-- 272
VN R+ LSR +D V R + G+ G+G+++ RR+R
Sbjct: 401 AVNVRIMLSRTGRRRMLDQDDLRPVKRRRPREDDDDEEEDEAGI-GAGADEKGERRSRIQ 459
Query: 273 ---------RSLHVVFAPHLADTSCEFEITREGV 297
R +HVVF+P + ++ IT G+
Sbjct: 460 IDKAKPTLIRRMHVVFSPFCPSGTVDYAITPSGI 493
>gi|58260590|ref|XP_567705.1| RAD57 protein [Cryptococcus neoformans var. neoformans JEC21]
gi|57229786|gb|AAW46188.1| RAD57 protein, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 598
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 154/394 (39%), Gaps = 128/394 (32%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP---SSHGGLSASSLYLHTEFP 83
+D CLGGG+ + E+ ES +GK+ F L L L QL SS GG SL L +E
Sbjct: 105 LDECLGGGLRRGCLYEIAGESAAGKSHFALTLALCCQLSSLTSSPGG----SLILTSERE 160
Query: 84 FPMRRLHQLSHTF----------RPSNDHNP-----CDYIFVQSVHSVDQLLD----IMP 124
RL QL RP + +P D I V +D L ++P
Sbjct: 161 LSTDRLIQLGEPLLAVHEPRAEERPEGEIDPRVKGLLDNILSNRVSDIDALEHALSYVIP 220
Query: 125 K-IESFIKNSSNSRL----------PIRLIVIDSIAALFRSD---------FDNTMDDLK 164
+ES +K SS+S PIRLI++DS+ AL R + L
Sbjct: 221 ALLESRLKTSSSSSSQPFPSRSHLKPIRLIILDSLTALLRGGSASSPSTRPAATSSSSLT 280
Query: 165 KRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDL--------------------------- 197
+RS ++ +LKA+A + LAV+V NQV D+
Sbjct: 281 ERSKHLCVVADLLKALAARYDLAVVVINQVSDVFPRQQHSSSSGVVAAYSSPLMLAGTPP 340
Query: 198 ---------------MEPNEGVNGLRVGNLGCLYS------SGRPIC----PALGIAWAN 232
+ +G + G+ LY+ SG+ +LGI WAN
Sbjct: 341 SSAWDQTQPFGPGMAQQQQQGTSNASGGDPPMLYASQSRWFSGQSDVLNKEASLGIVWAN 400
Query: 233 CVNSRLFLSR--------NEDF--VVREN--------QMVNGGVGGSGSEDFVCRRTR-- 272
VN R+ LSR +D V R + G+ G+G+++ RR+R
Sbjct: 401 AVNVRIMLSRTGRRRMLDQDDLRPVKRRRPREDDDDEEEDEAGI-GAGADEKGERRSRIQ 459
Query: 273 ---------RSLHVVFAPHLADTSCEFEITREGV 297
R +HVVF+P + ++ IT G+
Sbjct: 460 IDKAKPTLIRRMHVVFSPFCPSGTVDYAITPSGI 493
>gi|123408472|ref|XP_001303202.1| DNA repair protein RAD51 homolog [Trichomonas vaginalis G3]
gi|84784038|gb|ABC61984.1| Rad51-like protein A [Trichomonas vaginalis]
gi|121884563|gb|EAX90272.1| DNA repair protein RAD51 homolog, putative [Trichomonas vaginalis
G3]
Length = 329
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 118/281 (41%), Gaps = 45/281 (16%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ LGGGI S+TE+ E +GKTQ C L ++ QLP +GG L++ T
Sbjct: 94 TTGSTELDKLLGGGIETGSVTEIFGEFRTGKTQLCHTLAVTCQLPIENGGGQGKCLWIDT 153
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R+ ++ F D + D I ++ D ++ + + + +
Sbjct: 154 EGTFRPERIIPIAQRFGLDPD-DVMDNIAYARAYNSDHQSQLLVTASAMMAEAHYA---- 208
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLMEP 200
L+++DS L+R+D+ +L R + ++ +A +G+AV++TNQVV ++
Sbjct: 209 -LLIVDSSTNLYRTDYSG-RGELSARQMHLGQFLRNIQRLADEYGIAVVITNQVVAQVD- 265
Query: 201 NEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGG 260
G P P G A+ +RL L + G
Sbjct: 266 ------------GAAMFVSDPKKPIGGNIMAHASQTRLSLRK-----------------G 296
Query: 261 SGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
G E VC+ + +P L + F+IT G+ E
Sbjct: 297 RG-ETRVCK-------IYDSPSLPENEATFQITNGGITDAE 329
>gi|237843305|ref|XP_002370950.1| meiotic recombination protein DMC1-like protein, putative
[Toxoplasma gondii ME49]
gi|211968614|gb|EEB03810.1| meiotic recombination protein DMC1-like protein, putative
[Toxoplasma gondii ME49]
gi|221481850|gb|EEE20220.1| meiotic recombination protein dmc1, putative [Toxoplasma gondii
GT1]
gi|221502349|gb|EEE28082.1| meiotic recombination protein dmc1, putative [Toxoplasma gondii
VEG]
Length = 349
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 118/282 (41%), Gaps = 45/282 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G +D+ LGGG SITEL E+ GKTQ C + ++AQLP G Y+
Sbjct: 111 KITTGSDQLDQLLGGGFETMSITELFGENRCGKTQLCHTVCVTAQLPRDMKGGCGKVCYI 170
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F ++ ++ F D D I + + + ++ + +
Sbjct: 171 DTEGTFRPEKIQGIAERFGLDGD-GVLDNIMYARAFTTEHMHQLLT-----LAAAKMCEE 224
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
++++DSI ALFR DF + ++ L +S M+K +A + LAV++TNQV +
Sbjct: 225 RFSVLIVDSIIALFRVDFSGRGELADRQQKLNRMLSIMMK-LAEQYNLAVMLTNQV--MS 281
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+P G L + P P G + +RL + +
Sbjct: 282 DPGGG-----------LTFTANPTKPVGGHVLGHASTTRLSMRK---------------- 314
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGV 300
G G + R + V AP+L ++ C +++ G+ V
Sbjct: 315 -GKGDQ--------RIVKVYDAPNLPESECIIQLSSRGIIDV 347
>gi|258570189|ref|XP_002543898.1| DNA repair protein RAD51 [Uncinocarpus reesii 1704]
gi|237904168|gb|EEP78569.1| DNA repair protein RAD51 [Uncinocarpus reesii 1704]
Length = 348
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 7/175 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITE+ E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 103 TTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQLCHTLAVTCQLPFDMGGGEGKCLYIDT 162
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ + + D + ++ D L ++ + + + S
Sbjct: 163 EGTFRPVRLLAVAQRYGLVGEE-VLDNVAYARAYNSDHQLQLLNQASQMMCETRFS---- 217
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
L+++DS +L+R+DF +L R + L+ +A FG+AV++TNQVV
Sbjct: 218 -LLIVDSATSLYRTDFSG-RGELSSRQNHLARFMRTLQRLADEFGVAVVITNQVV 270
>gi|401840270|gb|EJT43158.1| RAD57-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 448
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 22/181 (12%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
ID L GGI + ITE+ ES +GK+Q +QL LS QL + GGL+ +Y+ TE P
Sbjct: 94 IDELLSGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEAEGGLAGKCVYITTEGDLPT 153
Query: 87 RRLHQLSHTFRPSNDH----------NPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNS 136
+RL + + RP+ + C+ + Q H ++ L I+ + S
Sbjct: 154 QRLESMLSS-RPAYEKLGISQSNIFTVNCNDLINQE-HIINVQLPILLE---------RS 202
Query: 137 RLPIRLIVIDSIAALFRSDFDN-TMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
R I+L+++DSI+ R + N + + ++ K++ L+ +A + LAV+V NQV
Sbjct: 203 RGAIKLVIVDSISHHLRVELQNKSFRESQENKNYLDKMAEKLQILAHDYSLAVVVANQVG 262
Query: 196 D 196
D
Sbjct: 263 D 263
>gi|281351151|gb|EFB26735.1| hypothetical protein PANDA_002516 [Ailuropoda melanoleuca]
Length = 285
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 7/176 (3%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++ T
Sbjct: 70 TTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYSGGKIIFIDT 129
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
E F RL ++ F + DHN D + ++ + ++++ + + +
Sbjct: 130 ENTFRPDRLRDIADRF--NVDHNAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG---I 184
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 185 FKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 239
>gi|126339552|ref|XP_001367929.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog
[Monodelphis domestica]
Length = 342
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++
Sbjct: 103 VTTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGTGGYPGGKIIFID 162
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + DHN D + ++ + ++++ + + +
Sbjct: 163 TENTFRPDRLRDIADRF--NVDHNAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGV-- 218
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 219 -FKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 273
>gi|440903014|gb|ELR53728.1| Meiotic recombination protein DMC1/LIM15-like protein, partial [Bos
grunniens mutus]
Length = 345
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 7/176 (3%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++ T
Sbjct: 107 TTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYSGGKIIFIDT 166
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
E F RL ++ F + DHN D + ++ + ++++ + + +
Sbjct: 167 ENTFRPDRLRDIADRF--NVDHNAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG---I 221
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 222 FKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 276
>gi|296487030|tpg|DAA29143.1| TPA: DMC1 dosage suppressor of mck1 homolog [Bos taurus]
Length = 340
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYSGGXIIFID 160
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + DHN D + ++ + ++++ + + +
Sbjct: 161 TENTFRPDRLRDIADRF--NVDHNAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG--- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 216 IFKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 271
>gi|13161942|emb|CAC32998.1| putative DMC1 protein [Pleurotus ostreatus]
gi|13171056|emb|CAC33176.1| DMC1 homologue [Pleurotus ostreatus]
Length = 347
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 20/232 (8%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
+ G +D LGGGI S++E+ E +GKTQ +++ AQLP GG S Y+
Sbjct: 110 ISTGSKNVDVILGGGIMSQSVSEVYGEFRTGKTQLAHTMSVVAQLPPDLGGASGKVAYID 169
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
TE F R+ ++ F + ++ ++ +S Q+ I F ++
Sbjct: 170 TEGTFRPDRIRSIAERFGVDGSLALENILYARAFNSEHQMELINECSMRFAEDKD----- 224
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
RL+++DSI ALFR D+ +L +R ++ L ++ + +AVL+TNQV +
Sbjct: 225 FRLLIVDSIMALFRVDYSGR-GELSERQQKLAQMLSRLTKLSEEYNIAVLLTNQV----Q 279
Query: 200 PNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL--SRNEDFVVR 249
+ G + +G + P G ++ ++RLFL R E+ V +
Sbjct: 280 SDPGAT--------MTFVAGGALKPIGGHILSHASSTRLFLRKGRAEERVAK 323
>gi|189197611|ref|XP_001935143.1| DNA repair protein RAD51 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187981091|gb|EDU47717.1| DNA repair protein RAD51 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 341
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 23/233 (9%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K + G +D LGGG SI+E+ E GKTQ +++ QLP GG Y+
Sbjct: 103 KISTGSKALDAVLGGGFQTMSISEVFGEFRCGKTQLSHTMSVITQLPKDMGGAEGKVAYI 162
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
T F R+ Q++ F + + + ++V+S Q+ + E F+ N
Sbjct: 163 GT---FRPERIAQIAERFGVDPETAQDNITYARAVNSEHQMELLNKVAEFFVSNE----- 214
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
RL++IDSI ALFR D+ + +++ L +S + F +AVL+TNQV
Sbjct: 215 -YRLLIIDSIMALFRVDYTGRGELNERQQKLNQFLSKLTHVAEAEFNVAVLLTNQV---- 269
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL--SRNEDFVVR 249
+ + G + L G + GR P G A+ +R+ L R E+ V +
Sbjct: 270 QSDPGASALFAG------ADGRK--PIGGHILAHASATRILLRKGRGEERVAK 314
>gi|16082126|ref|NP_394563.1| DNA repair and recombination protein RadA [Thermoplasma acidophilum
DSM 1728]
gi|13878691|sp|Q9HJ68.1|RADA_THEAC RecName: Full=DNA repair and recombination protein RadA
gi|10640417|emb|CAC12231.1| probable DNA repair protein Rad51 (RadA) [Thermoplasma acidophilum]
Length = 323
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 7/189 (3%)
Query: 6 TPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLP 65
T + +L+ + +K T G +D LGGG+ +ITE E GSGKTQ QL ++ LP
Sbjct: 76 TGEEILERRKSIQKLTTGSKNLDDLLGGGLETQAITEFFGEFGSGKTQIMHQLAVNCTLP 135
Query: 66 SSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPK 125
GG + + + TE F R+ Q++ + D ++ +S Q+L + K
Sbjct: 136 KEKGGFDSDVMMIDTENTFRPERIIQMAKSKGADPDETLKRIHVARAYNSHHQIL-LAEK 194
Query: 126 IESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
+ K + I+L+++DS+ A FRS++ +++ L + +L+ + +
Sbjct: 195 AQDTAKEYN-----IKLLIVDSLTAHFRSEYVGRGSLAERQQLLNKHMHDLLRFGTI-YN 248
Query: 186 LAVLVTNQV 194
+ VTNQV
Sbjct: 249 AVIAVTNQV 257
>gi|386001150|ref|YP_005919449.1| DNA repair and recombination protein RadA [Methanosaeta
harundinacea 6Ac]
gi|357209206|gb|AET63826.1| DNA repair and recombination protein RadA [Methanosaeta
harundinacea 6Ac]
Length = 326
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 96/218 (44%), Gaps = 39/218 (17%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G D +GGG +I E+ E GSGKTQ Q+ ++ QLP+ GGL+ S + +
Sbjct: 81 KVTTGSETFDALMGGGFETQAIVEVYGEFGSGKTQVAHQVAVNVQLPAEEGGLNGSVIII 140
Query: 79 HTEFPFPMRRLHQLSHTFRPS--------------NDHNPCDYIFVQSVHSVDQLLDIMP 124
TE F R+ Q+ PS N H Y + + LD+
Sbjct: 141 DTENTFRPERIAQMVEGLPPSGEPEKPREPEEFLRNIHVARAYNSNHQILLAESALDLAE 200
Query: 125 KIESFIKNSSNSRLPIRLIVIDSIAALFRSDF--DNTMDD----LKKRSFLFFKISGMLK 178
K++ S P RL+++DS+ A FR+++ T+ D L K + + +
Sbjct: 201 KMK-------KSGKPARLLIVDSLTAHFRAEYVGRGTLADRQQKLNKHLHTLMRFADLNN 253
Query: 179 AMAVGFGLAVLVTNQVVD-----LMEPNEGVNGLRVGN 211
A+ VLVTNQV+ +P + V G VG+
Sbjct: 254 AV-------VLVTNQVMAKPDAFFGDPTKPVGGHIVGH 284
>gi|403217708|emb|CCK72201.1| hypothetical protein KNAG_0J01200 [Kazachstania naganishii CBS
8797]
Length = 478
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 22/193 (11%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D L GGI SITE+ S +GK+Q +Q+ LS QLP GL +Y+ T
Sbjct: 88 TTGDVTLDELLNGGIYTQSITEIFGASSTGKSQLLMQMALSVQLPRQTNGLGGKCVYITT 147
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP- 139
E P +RL ++ S D + + +++ +V D+M + ++ N +LP
Sbjct: 148 EGDLPTKRLEEMI----ASRDEFTENCVSQKNIFTV-SCNDLMNQ-----EHILNVQLPV 197
Query: 140 --------IRLIVIDSIAALFRSDFDN-TMDDLKKRSFLFFKISGMLKAMAVGFGLAVLV 190
I+L++IDSI+ R + N + + ++ F +++ L ++A + +A++V
Sbjct: 198 LLERNAGDIKLVIIDSISHHLRVELVNKSYQEAQENKFYIDQLAESLLSIATKYDIAIVV 257
Query: 191 TNQVVD--LMEPN 201
NQV D +++PN
Sbjct: 258 ANQVSDKPVIDPN 270
>gi|448457837|ref|ZP_21595842.1| DNA repair and recombination protein RadA [Halorubrum lipolyticum
DSM 21995]
gi|445810138|gb|EMA60169.1| DNA repair and recombination protein RadA [Halorubrum lipolyticum
DSM 21995]
Length = 343
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 26/193 (13%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGGI SITE+ E GSGK+Q Q+ ++ QLP HGGL +++ +E F
Sbjct: 89 VDDLLGGGIETQSITEVYGEFGSGKSQVTHQMAVNVQLPPEHGGLDGGCIFVDSEDTFRP 148
Query: 87 RRLHQL----------SHTFRPSNDHNPCDY--------IFVQSVH------SVDQLLDI 122
R+ + R + P D F+ +H S Q+L +
Sbjct: 149 ERIDDMVRGLDDEILVDEMERREIEGTPSDEEAMEELVGAFLDQIHVAKAFNSNHQIL-L 207
Query: 123 MPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAV 182
K + S PIR++ +DS+ A FR+++ + ++ L + +++ +
Sbjct: 208 AEKAKELAGEHEESEWPIRIVCVDSLTAHFRAEYVGRGELADRQQKLNKHLHDLMRIGDL 267
Query: 183 GFGLAVLVTNQVV 195
F A+LVTNQV
Sbjct: 268 -FNTAILVTNQVA 279
>gi|116199387|ref|XP_001225505.1| hypothetical protein CHGG_07849 [Chaetomium globosum CBS 148.51]
gi|88179128|gb|EAQ86596.1| hypothetical protein CHGG_07849 [Chaetomium globosum CBS 148.51]
Length = 476
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 78/144 (54%), Gaps = 16/144 (11%)
Query: 25 PIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPF 84
P +DR LGGGIP +TE+ ESG+GKTQF L L L+AQLP H GLS +LY+ TE P
Sbjct: 132 PDLDRALGGGIPAGYVTEVTGESGAGKTQFLLSLLLAAQLPPPH-GLSRPALYISTEAPL 190
Query: 85 PMRRLHQL----SHTFR-PSNDHNPCDYIF---VQSVHSVDQLLDIMPKIESFIKNSSNS 136
RRL Q+ H R P + D I + S D +L+ +E
Sbjct: 191 STRRLAQMLTANPHFQRLPPSQRPSLDNIISTVTPDLESQDHILNFQVPVEV-------E 243
Query: 137 RLPIRLIVIDSIAALFRSDFDNTM 160
R I LIV+DS+AA +R+D ++
Sbjct: 244 RRGIGLIVLDSVAANYRADTSTSI 267
>gi|313124902|ref|YP_004035166.1| DNA repair and recombination protein rada [Halogeometricum
borinquense DSM 11551]
gi|448287310|ref|ZP_21478523.1| DNA repair and recombination protein RadA [Halogeometricum
borinquense DSM 11551]
gi|312291267|gb|ADQ65727.1| DNA repair and recombination protein RadA [Halogeometricum
borinquense DSM 11551]
gi|445572518|gb|ELY27056.1| DNA repair and recombination protein RadA [Halogeometricum
borinquense DSM 11551]
Length = 343
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 24/200 (12%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K + G +D LGGG+ SITE+ E G+GK+Q Q+ ++ QLP HGGL S +++
Sbjct: 81 KLSWGISEVDDLLGGGLETQSITEVYGEFGAGKSQVTHQMAVNVQLPPEHGGLGGSCIFV 140
Query: 79 HTEFPFPMRRLHQL--------------SHTFRPSNDHNPC---------DYIFVQSVHS 115
+E F R+ + S D D I V +
Sbjct: 141 DSEDTFRPERIDDMVRGLDDEIIQATMDEREIEGSPDDEAAMEELLNDFLDKIHVAKAFN 200
Query: 116 VDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISG 175
+ + + K + ++ P+RL+ +DS+ A FR+++ +++ L +
Sbjct: 201 SNHQILLAEKAKELARDHEEDEFPVRLLCVDSLTAHFRAEYVGRGQLAERQQKLNKHLHD 260
Query: 176 MLKAMAVGFGLAVLVTNQVV 195
+++ + + AVLVTNQV
Sbjct: 261 LMRIGDL-YNTAVLVTNQVA 279
>gi|300122361|emb|CBK22933.2| unnamed protein product [Blastocystis hominis]
gi|300122364|emb|CBK22936.2| unnamed protein product [Blastocystis hominis]
gi|300122845|emb|CBK23852.2| unnamed protein product [Blastocystis hominis]
Length = 333
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 6/136 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
+ GC +D LGGG+ S+TEL E +GKTQ C L + QLP GG +LY+ T
Sbjct: 98 STGCKELDAILGGGMETGSLTELYGEFRTGKTQLCHTLCVICQLPVEQGGGEGKALYIDT 157
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL Q+S F + ++ D + ++ + + ++ + + + S SR
Sbjct: 158 EGTFRPERLAQISQRF-GLDPNDVMDNVAYARAYNSEHQMQLLMQAGALM---SESRFA- 212
Query: 141 RLIVIDSIAALFRSDF 156
L+++DS ALFR+D+
Sbjct: 213 -LVIVDSATALFRTDY 227
>gi|448475881|ref|ZP_21603236.1| DNA repair and recombination protein RadA [Halorubrum aidingense
JCM 13560]
gi|445816099|gb|EMA66008.1| DNA repair and recombination protein RadA [Halorubrum aidingense
JCM 13560]
Length = 343
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 26/193 (13%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGGI SITE+ E GSGK+Q Q+ ++ QLP+ HGGL +++ +E F
Sbjct: 89 VDDLLGGGIETQSITEVYGEFGSGKSQVTHQMAVNVQLPAEHGGLDGGCIFVDSEDTFRP 148
Query: 87 RRLHQLSHTFR----------------PSNDHNPCDYI--FVQSVH------SVDQLLDI 122
R+ + P+N+ + + F+ +H S Q+L +
Sbjct: 149 ERIDDMVRGLDDEILADEMERREIEGTPNNEEAMEELVGAFLDQIHVAKAFNSNHQIL-L 207
Query: 123 MPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAV 182
K + PIR++ +DS+ A FR+++ + ++ L + +++ +
Sbjct: 208 AEKAKELAGEHEEGEWPIRIVCVDSLTAHFRAEYVGRGELADRQQKLNKHLHDLMRIGDL 267
Query: 183 GFGLAVLVTNQVV 195
F A+LVTNQV
Sbjct: 268 -FNTAILVTNQVA 279
>gi|241950183|ref|XP_002417814.1| DNA double-strand-break repair and homologue-pairing meiosis
protein (DMC1/RAD51 homologue), putative [Candida
dubliniensis CD36]
gi|223641152|emb|CAX45529.1| DNA double-strand-break repair and homologue-pairing meiosis
protein (DMC1/RAD51 homologue), putative [Candida
dubliniensis CD36]
Length = 324
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 90/174 (51%), Gaps = 7/174 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G D LGGGI SITE+ E GKTQ C L ++AQLP+ GG Y+ T
Sbjct: 88 TTGSRQFDEILGGGIQSMSITEVFGEFRCGKTQLCHTLCIAAQLPTDMGGGEGRVAYIDT 147
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F R+ ++ + D + + ++++S Q ++++ ++ + + +
Sbjct: 148 EGTFRPDRIRSIAERYDVDADTCLENISYARALNSEHQ-IELVEQLGNELAEGT-----F 201
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQV 194
RL+++DSI A FR DF + +++ L +S + + +A + +AV +TNQV
Sbjct: 202 RLLIVDSIMACFRVDFSGRGELNERQQKLNQHLSNLTR-VAEDYNIAVFLTNQV 254
>gi|294891379|ref|XP_002773550.1| structural maintenance of chromosome, putative [Perkinsus marinus
ATCC 50983]
gi|239878722|gb|EER05366.1| structural maintenance of chromosome, putative [Perkinsus marinus
ATCC 50983]
Length = 952
Score = 77.4 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 37/78 (47%), Positives = 48/78 (61%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + GCP ID L GG+ SITE+ ES SGK+QFC L ++AQLP S GG + SLY+
Sbjct: 85 RISTGCPSIDALLRGGVETGSITEVFGESRSGKSQFCHALCVAAQLPVSQGGAAGRSLYI 144
Query: 79 HTEFPFPMRRLHQLSHTF 96
TE F RL + H +
Sbjct: 145 DTEGTFRPERLADMGHKW 162
>gi|14571806|dbj|BAB61097.1| RiLim15 [Oryza sativa Indica Group]
Length = 344
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 91/194 (46%), Gaps = 13/194 (6%)
Query: 5 MTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQL 64
+T +LL + + T G + + LGGGI ITE E SGKTQ L +S QL
Sbjct: 93 ITGSDLLIKRKSVVRITTGSQALYKLLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQL 152
Query: 65 PSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSV---HSVDQLLD 121
P G + Y+ TE F R+ ++ F + + I+ ++ H + LL
Sbjct: 153 PIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLG 212
Query: 122 IMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMA 181
+ K+ + P RL+++DS+ ALFR DF +L +R ++ L +A
Sbjct: 213 LAAKM---------AEEPFRLLIVDSVIALFRVDFSGR-GELAERQQKLAQMLSRLTKIA 262
Query: 182 VGFGLAVLVTNQVV 195
F +AV +TNQV+
Sbjct: 263 EEFNVAVYITNQVI 276
>gi|448488854|ref|ZP_21607453.1| DNA repair and recombination protein RadA [Halorubrum
californiensis DSM 19288]
gi|445695475|gb|ELZ47578.1| DNA repair and recombination protein RadA [Halorubrum
californiensis DSM 19288]
Length = 343
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 26/193 (13%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGGI SITE+ E GSGK+Q Q+ ++ QLP HGGL +++ +E F
Sbjct: 89 VDELLGGGIETQSITEVYGEFGSGKSQVTHQMAVNVQLPPEHGGLDGGCIFVDSEDTFRP 148
Query: 87 RRLHQL----------SHTFRPSNDHNPCD--------YIFVQSVH------SVDQLLDI 122
R+ + R + P D F+ +H S Q+L +
Sbjct: 149 ERIDDMVRGLDDEILADEMERREIEGTPSDEEAMEELVEAFLDQIHVAKAFNSNHQIL-L 207
Query: 123 MPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAV 182
K + + PIR++ +DS+ A FR+++ + ++ L + +++ +
Sbjct: 208 AEKAKELAGEHEETEWPIRIVCVDSLTAHFRAEYVGRGELADRQQKLNKHLHDLMRIGDL 267
Query: 183 GFGLAVLVTNQVV 195
F A+LVTNQV
Sbjct: 268 -FNTAILVTNQVA 279
>gi|209944554|gb|ACI96508.1| spindle D [Drosophila yakuba]
Length = 212
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 17/179 (9%)
Query: 17 TEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSL 76
T K G +D GGGI + EL+ SG+GKTQ CLQL L+ Q+P + GGL S+L
Sbjct: 43 TNKILTGNKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSAL 102
Query: 77 YLHTEFPFPMRRLHQL--------SHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIES 128
++ T F RL +L +H H ++ H + QL+ +
Sbjct: 103 FIDTNQDFHPDRLKELALKLERQYAHKVPEFKAHKMLQKVYYVKCHKLHQLMATVLSCHR 162
Query: 129 FIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLA 187
+ N + I+LIVIDS+A R ++D +R + ++ ++ + LA
Sbjct: 163 HLANHPD----IKLIVIDSLAFTLR-----MLEDGAQRYEMLLELHESMRRLQRHHELA 212
>gi|359415641|ref|ZP_09208069.1| DNA repair and recombination protein RadA [Candidatus Haloredivivus
sp. G17]
gi|358034001|gb|EHK02478.1| DNA repair and recombination protein RadA [Candidatus Haloredivivus
sp. G17]
Length = 316
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 7/178 (3%)
Query: 18 EKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLY 77
++ T +D LGGG+ +ITE E GS KTQ QL ++ Q GGL ++Y
Sbjct: 82 KRITTNSENVDEVLGGGVETQAITEFYGEYGSAKTQLSHQLAVNVQRDEEDGGLGREAIY 141
Query: 78 LHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSR 137
+ TE F R+ Q++ D + ++ +S Q+L + + + +
Sbjct: 142 IDTEDTFTPTRVEQMAEANGMDVDETLENIHVARAFNSDHQML-LADQAQDICAEND--- 197
Query: 138 LPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+ LI++DS+ A FRSD+ +L R K L +A LAV+VTNQV+
Sbjct: 198 --VGLIIVDSLTAQFRSDY-VGRGELAPRQQKLNKHMNTLLRLANSHNLAVVVTNQVM 252
>gi|221102981|ref|XP_002169171.1| PREDICTED: DNA repair protein RAD51 homolog A-like [Hydra
magnipapillata]
Length = 336
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 7/173 (4%)
Query: 23 GCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEF 82
G +D+ L GG SITE+ E +GKTQ C QL ++ QLP GG ++Y+ TE
Sbjct: 102 GSKELDKLLQGGFETGSITEIFGEFRTGKTQLCHQLCVTCQLPVDCGGAEGKAMYVDTEG 161
Query: 83 PFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRL 142
F R ++ + N D + ++ D ++ + + + + L
Sbjct: 162 TFRPERCLAVAERY-GLNGQEVLDNVAYARAYNSDHQTQLLIHASAMMSEARYA-----L 215
Query: 143 IVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+++DS AL+R+D+ +L R + L +A FG+AV++TNQVV
Sbjct: 216 LIVDSATALYRTDYSG-RGELSARQMHLARFLRTLLRLADEFGVAVVITNQVV 267
>gi|356558427|ref|XP_003547508.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Glycine max]
Length = 378
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 113/227 (49%), Gaps = 25/227 (11%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GGIP +TELV +G GKTQFCL+L+L A LP++ GGL +Y+ E F
Sbjct: 91 LDEALCGGIPFGVLTELVGPAGIGKTQFCLKLSLLASLPTNCGGLDGRVIYIDVESKFRS 150
Query: 87 RRLHQLSHTFRPSNDHNPCDYIFVQ---SVHSVDQLLDIMP-KIESFIKNSSNSRLP--- 139
+RL ++ P IF++ + ++L + P + F ++ R+
Sbjct: 151 KRLIEIGINSFPE--------IFLKKGMAQEMAGRILILHPTSLSEFAESLHQIRVSLLQ 202
Query: 140 --IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDL 197
++L++IDS+AAL + D+ + ++ L + +S +K++A + V++TNQV
Sbjct: 203 QQVKLLIIDSMAALVLGEHDS---EASRQQALGWHVS-FIKSLAEFSRIPVVLTNQVRSQ 258
Query: 198 MEPNEGVNGLRVGNLGCLY----SSGRPICPALGIAWANCVNSRLFL 240
+ + + + + + + ALGI WA+ V RL L
Sbjct: 259 IGDESRMYSFQAQSHSIIKDNPATYDSHLVAALGINWAHAVTIRLVL 305
>gi|406864043|gb|EKD17089.1| meiotic recombination protein dmc1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 339
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 104/233 (44%), Gaps = 21/233 (9%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D L GG SI E+ E GKTQ + + AQLP GG Y+
Sbjct: 99 RISTGSKQLDAALNGGFQTMSINEVYGEFRCGKTQLAHTMAVIAQLPKEMGGAEGKVAYI 158
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ +++ F D C+ I + + +++ E N + +
Sbjct: 159 DTEGTFRPERIAEIAERFGVDPDQ-ACENIAYARAQNSEMQTELL---EGLAANFATNEY 214
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
RL+VIDS+ +L+R+D+ +L +R + + MA F L VL+TNQV+
Sbjct: 215 --RLLVIDSVMSLYRTDYCG-RGELSERQQVLGQFLRRATQMAEEFNLVVLMTNQVM--- 268
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL--SRNEDFVVR 249
+ G + L G + GR PA G A+ +RL L R E+ V +
Sbjct: 269 -SDPGASALFAG------ADGRK--PAGGHILAHASTTRLLLRKGRGEERVAK 312
>gi|255712479|ref|XP_002552522.1| KLTH0C06842p [Lachancea thermotolerans]
gi|238933901|emb|CAR22084.1| KLTH0C06842p [Lachancea thermotolerans CBS 6340]
Length = 381
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITEL E +GK+Q C L ++ Q+P GG LY+ T
Sbjct: 142 TTGSKNLDTLLGGGIETGSITELFGEFRTGKSQLCHTLAVTCQIPLDMGGGEGKCLYIDT 201
Query: 81 EFPFPMRRLHQLSHTF--RPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F RL ++ F P + N Y + +LLD ++ S SR
Sbjct: 202 EGTFRPIRLVSIAQRFGLDPDDALNNVAYARAYNADHQLRLLDAAAQM------MSESRF 255
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
LIV+DSI AL+R+DF + +L R K L+ +A FG
Sbjct: 256 S--LIVVDSIMALYRTDF-SGRGELSARQMHLAKFMRALQRLADQFG 299
>gi|169806553|ref|XP_001828021.1| DNA repair and recombination protein RAD51 [Enterocytozoon bieneusi
H348]
gi|161779161|gb|EDQ31186.1| DNA repair and recombination protein RAD51 [Enterocytozoon bieneusi
H348]
Length = 337
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 21/223 (9%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ L GGI +ITE+ E +GK+Q C + ++ QLP +GG + +Y+ T
Sbjct: 100 TTGSTELDKLLNGGIESGTITEVFGEFRTGKSQLCHTVAVTCQLPKENGGGNGKCMYIDT 159
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
E F RL ++ R D N D I + D +++ + + S
Sbjct: 160 EGTFRTERLIPIAE--RLGLDPNEVLDNISYARAFNSDHQNNLLIHASAMM-----SETK 212
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
++++DS +L+R+D+ N +L R + L +A +G+AV++TNQVV ++
Sbjct: 213 YAVLIVDSATSLYRTDY-NGRGELSARQISLARFLRSLTNLAETYGIAVIITNQVVANVD 271
Query: 200 PNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
V G G P G A+ N+RL+ +
Sbjct: 272 GAVAVFG------------GDVKKPIGGHIIAHASNTRLYFRK 302
>gi|156848553|ref|XP_001647158.1| hypothetical protein Kpol_1036p43 [Vanderwaltozyma polyspora DSM
70294]
gi|156117842|gb|EDO19300.1| hypothetical protein Kpol_1036p43 [Vanderwaltozyma polyspora DSM
70294]
Length = 460
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 120/248 (48%), Gaps = 31/248 (12%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D LGGGI ITE+ ES +GK+Q + L+L QLP S GGL S+Y+ TE P
Sbjct: 94 LDEALGGGIYTQCITEIYGESSTGKSQLAMLLSLCVQLPKSLGGLEGKSVYITTEGDLPT 153
Query: 87 RRLHQL---SHTFRPSNDHNPCDYIFVQSVHSV---DQLLDIMPKIESFIKNSSNSRLPI 140
RL + + TF S++ + IF S + + + +LD+ ++ + NS S I
Sbjct: 154 ERLEGIINSNETF--SSNGVSQEKIFTVSCNDLINQEHILDV--QLPVLLDNSKGS---I 206
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKI-SGMLKAMAVGFGLAVLVTNQVVD--- 196
+ I+IDSI+ R + +T + + + I + L +A + +AV+VTNQ+ D
Sbjct: 207 KAIIIDSISHHLRVELQSTSYKESQENRHYIDILAEKLLLLAKKYNVAVIVTNQISDKPL 266
Query: 197 --LMEP-------NEGVNGLRVG--NLGCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
L EP E G VG + LY R P L + N + LS +ED
Sbjct: 267 VKLSEPMQQDLLDYEYQLGWIVGWKDSSILYRQ-RYNEPTL--SSQNEITETAILSDDED 323
Query: 246 FVVRENQM 253
+ + E +M
Sbjct: 324 YQLVEKEM 331
>gi|154288577|ref|XP_001545068.1| hypothetical protein BC1G_16430 [Botryotinia fuckeliana B05.10]
Length = 311
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 87/155 (56%), Gaps = 9/155 (5%)
Query: 48 GSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDH-NPCD 106
G+GKTQF L L LSAQLP+ H GL++ +LY+ TE P+ RL QL T H +P
Sbjct: 17 GAGKTQFLLTLLLSAQLPAPH-GLASPTLYISTESSLPITRLSQLLRTHPLLASHPSPPS 75
Query: 107 YIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNT-----MD 161
V S+ + D L+ I F + R IRL+++DS+AA +R++F+
Sbjct: 76 LDRVISISTPD--LESQDHILRFQVPVAIKRHGIRLLILDSVAANYRAEFERPGVTKGGG 133
Query: 162 DLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
++ +RS K+ +L+ +A G+A++V NQV D
Sbjct: 134 NMAQRSAELVKLGQLLRDLAREHGVAIVVANQVAD 168
>gi|440493420|gb|ELQ75893.1| Meiotic recombination protein Dmc1, partial [Trachipleistophora
hominis]
Length = 335
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 28/226 (12%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ T G +D L GG+ S+TE+ E +GKTQ CL L ++AQL ++ Y+
Sbjct: 101 RITTGSSDLDALLNGGVQTMSVTEIFGEFRTGKTQICLTLCITAQLQE-----NSKVAYI 155
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL +++ F + + I ++ +S D +D++ + + +
Sbjct: 156 DTEGTFRPERLREIAARFDIDQEQALQNVICARAYNS-DHQVDLLNTLSARFSDDPT--- 211
Query: 139 PIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVD 196
RL++IDS+ ALFR+DF + + +++ +F L+ MA + +AVL+TNQ+
Sbjct: 212 -YRLLIIDSVIALFRTDFIGRGELGERQQKLNIFL---SRLQRMAEEYNIAVLITNQM-- 265
Query: 197 LMEPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+ +P+ L P P G A+ +R++L +
Sbjct: 266 MSDPS-----------ATLTFVADPKKPIGGHVLAHASTTRIYLRK 300
>gi|281211390|gb|EFA85555.1| putative DNA repair protein [Polysphondylium pallidum PN500]
Length = 398
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 114/257 (44%), Gaps = 59/257 (22%)
Query: 24 CPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFP 83
C +D+ LGGGIP +TE G GKTQ LQL ++ LP GG++ ++Y+ TE
Sbjct: 38 CMELDQKLGGGIPLRKMTEFCGVPGVGKTQMSLQLAVNCCLPVEFGGVAGKTIYIDTEGS 97
Query: 84 FPMRRLHQLS-----HTFRPSND------------------------------HNPCDYI 108
F + RL Q++ H S D ++ + I
Sbjct: 98 FSVTRLRQMALALCEHLELISKDNSNNNNNNETTGGGDGVGDGRRKILESFTANHILESI 157
Query: 109 FVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSF 168
+ VH + L ++ + S ++ +R +RLIVIDSI FR F D+ +R+
Sbjct: 158 YYYRVHHYLEQLALVNMLPSILQ----ARSDVRLIVIDSITCPFRRHF----QDIAQRTR 209
Query: 169 LFFKISGMLKAMAVGFGLAVLVTNQVVDLMEPNEGVNGLRVGNLGCLYSSGRPICPALGI 228
+ +++ L ++A + +AV++TN V + N+G + L P+ G
Sbjct: 210 VLTQLATNLLSIAQQYNVAVVLTNHVSTKLN-NKGQSQL---------------MPSFGD 253
Query: 229 AWANCVNSRLFLSRNED 245
A + +R+FL ++
Sbjct: 254 ALGHICTNRIFLYYKQN 270
>gi|344296228|ref|XP_003419811.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog
[Loxodonta africana]
Length = 340
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYQGGKIIFID 160
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + DH+ D + ++ + ++++ + + +
Sbjct: 161 TENTFRPDRLRDIADRF--NVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG--- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 216 IFKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 271
>gi|326911974|ref|XP_003202330.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog
[Meleagris gallopavo]
Length = 342
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP +G +++
Sbjct: 103 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGPNGYTGGKIIFID 162
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + DH+ D + ++ + ++++ + + +
Sbjct: 163 TENTFRPDRLRDIADRF--NVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG--- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 218 IFKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 273
>gi|393795027|ref|ZP_10378391.1| DNA repair and recombination protein RadA [Candidatus
Nitrosoarchaeum limnia BG20]
Length = 396
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G +D GG+ ++TE+ E GSGKTQF L++ Q P + GGL LY+
Sbjct: 87 KITTGTNCLDTLFDGGVETQALTEVYGEFGSGKTQFAHTLSVMVQKPKTEGGLDGGVLYI 146
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ ++ + I ++ +S Q L I+ + I+ ++
Sbjct: 147 DTENTFRPERIVSIAQAHEMDPEKVLDRIIVARAYNSAHQTL-ILEEAGPVIEENN---- 201
Query: 139 PIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
I+LIV+DS LFR+++ T+ + +++ F ML +A + A + TNQV+
Sbjct: 202 -IKLIVVDSAVGLFRAEYLGRGTLSNRQQKLNHFVH---MLSRIAETYNCAAIATNQVM 256
>gi|190338308|gb|AAI63218.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination (yeast) [Danio rerio]
Length = 342
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 9/186 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G D+ LGGG+ +ITE E +GKTQ L ++AQLP +G +++ T
Sbjct: 104 TTGSLEFDKLLGGGVESMAITEAFGEFRTGKTQLSHTLCVTAQLPGEYGYTGGKVIFIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ F +D + ++ ++ S Q+ ++ F+ + +
Sbjct: 164 ENTFRPERLKDIADRFNVDHDAVLDNVLYARAYTSEHQM-----ELLDFVAAKFHEEGGV 218
Query: 141 -RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+ +
Sbjct: 219 FKLLIIDSIMALFRVDFSG-RGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT--AD 275
Query: 200 PNEGVN 205
P G+
Sbjct: 276 PGAGMT 281
>gi|429964014|gb|ELA46012.1| meiotic recombinase Dmc1 [Vavraia culicis 'floridensis']
Length = 329
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 24/226 (10%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ G +D L GG+ S+TE+ E +GKTQ CL L ++AQL ++ Y+
Sbjct: 95 RIATGSSDLDTLLNGGVQTMSVTEIFGEFRTGKTQICLTLCITAQLHE-----NSKVAYI 149
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL +++ F + + I ++ +S D +D++ + + +
Sbjct: 150 DTEGTFRPERLREIATRFDIDQERALQNVICARAYNS-DHQVDLLNTLSARFSEDTT--- 205
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
RL+VIDS+ ALFR+DF + +++ L +S +L+ MA + +AVL+TNQ+ +
Sbjct: 206 -YRLLVIDSVIALFRTDFIGRGELGERQQKLNIFLSRLLR-MAEEYNIAVLITNQM--MS 261
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNE 244
+P+ L P P G A+ +R++L + +
Sbjct: 262 DPS-----------ATLTFVADPKKPIGGHVLAHASTTRIYLRKGK 296
>gi|14595977|gb|AAK68858.1| DNA repair protein [Nosema bombycis]
Length = 333
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
+ G +D+ L GGI SITE+ E +GKTQ C + ++ QLP GG + +LY+ T
Sbjct: 96 STGSSELDKLLNGGIESGSITEIFGEFRTGKTQICHTVAVTCQLPPEQGGANGKALYIDT 155
Query: 81 EFPFPMRRLHQLSHTF--RPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSS-NSR 137
E F R ++ + P+ + Y + QLL I+ SS S+
Sbjct: 156 EGTFRSERFFPIAERYGLDPTEVLDNISYARAYNSDHQSQLL---------IQASSLMSQ 206
Query: 138 LPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+++IDS AL+R+DF +L R + L +A F +AV++TNQVV
Sbjct: 207 NKYAVLIIDSATALYRTDFSG-RGELGARQISLARYLRDLVNIAETFHVAVIITNQVV 263
>gi|340059041|emb|CCC53412.1| putative RAD51 protein [Trypanosoma vivax Y486]
Length = 410
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 7/165 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D+ LGGGI SITEL E +GKTQ C L ++ QLP S+GG +LY+ T
Sbjct: 173 TTGSREVDKLLGGGIETGSITELFGEFRTGKTQLCHTLCVTCQLPISNGGAEGMALYIDT 232
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPI 140
E F RL ++ ++ + + + ++ D +++ + + + + +R I
Sbjct: 233 EGTFRPERLVAVAERYKL-DAQDVLANVACARAYNSDHQQNLLVQASAMM---AENRFAI 288
Query: 141 RLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
I++DS AL+R+D+ N +L R K L+ +A +G
Sbjct: 289 --IIVDSATALYRTDY-NGRSELAARQMHLGKFLRSLQNLAEEYG 330
>gi|327294681|ref|XP_003232036.1| hypothetical protein TERG_07653 [Trichophyton rubrum CBS 118892]
gi|326465981|gb|EGD91434.1| hypothetical protein TERG_07653 [Trichophyton rubrum CBS 118892]
Length = 601
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 103/204 (50%), Gaps = 27/204 (13%)
Query: 10 LLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHG 69
+L P+T + T+ PI+D L GGI +TE+ ESG+GKTQF L L LS QLP+ H
Sbjct: 111 VLHPPVTGQISTLD-PILDSALSGGISTGYLTEVTGESGAGKTQFLLHLLLSVQLPAPH- 168
Query: 70 GLSASSLYLHTEFPFPMRRLHQLSHTFR------PSNDHNPCDYIFVQSVHSVDQLLDIM 123
GLS ++LY+ TE RL QL + R P D I+ SV +VD +
Sbjct: 169 GLSKNALYMSTESDLATNRLSQLINEHRTLQALHPETPRPSLDNIY--SVTTVD-----L 221
Query: 124 PKIESFIKNSSNSRLPIRLIVID-------SIAALFRSDFDNT-MDDLKKRSFLFFKISG 175
E I N ++P+ ++ + SI A +R++ + L +RS K+
Sbjct: 222 ESQEHII----NYQIPVAILRYNIGIIIIDSITANYRAESSTERVSGLLERSGQLKKLGH 277
Query: 176 MLKAMAVGFGLAVLVTNQVVDLME 199
L+ +AV +AV+V NQ+ D E
Sbjct: 278 FLRTLAVTHNIAVVVANQISDGFE 301
>gi|45185912|ref|NP_983628.1| ACR226Wp [Ashbya gossypii ATCC 10895]
gi|44981702|gb|AAS51452.1| ACR226Wp [Ashbya gossypii ATCC 10895]
gi|374106834|gb|AEY95743.1| FACR226Wp [Ashbya gossypii FDAG1]
Length = 381
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGGI SITEL E +GK+Q C L ++ Q+P GG LY+ T
Sbjct: 141 TTGSKNLDTLLGGGIETGSITELFGEFRTGKSQLCHTLAVTCQIPLDMGGGEGKCLYIDT 200
Query: 81 EFPFPMRRLHQLSHTF--RPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F RL ++ F P + N Y + +LLD ++ S SR
Sbjct: 201 EGTFRPIRLVSIAQRFGLDPDDALNNVAYARAYNADHQLRLLDAAAQM------MSESRF 254
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
LIV+DSI AL+R+DF + +L R K L+ +A FG
Sbjct: 255 S--LIVVDSIMALYRTDF-SGRGELSARQMHLAKFMRALQRLADQFG 298
>gi|395538165|ref|XP_003771055.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog
[Sarcophilus harrisii]
Length = 342
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++
Sbjct: 103 VTTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGTGGYTGGKVIFID 162
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ R + DH+ D + ++ + ++++ + +
Sbjct: 163 TENTFRPDRLRDIAD--RYNVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEGG--- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 218 IFKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 273
>gi|154345283|ref|XP_001568583.1| RAD51/dmc1 protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134065920|emb|CAM43702.1| RAD51/dmc1 protein [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 359
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 8/186 (4%)
Query: 11 LDNPLTTEKCTVGCPIIDRCLGGG-IPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHG 69
L T + + G +D+ LGGG I SITE E +GKTQ L +++QLP G
Sbjct: 112 LQQRSTILRISTGSTALDQLLGGGGIESRSITEAFGEFRTGKTQIGHTLCVTSQLPLEMG 171
Query: 70 GLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESF 129
G + +Y+ TE F R+ ++ F + ++ D I V ++ + ++ + +
Sbjct: 172 GGNGKVVYVDTEGTFRPERIRPIAERF-GLDPNSVLDNILVARAYTHEHQAHLLSMVAAK 230
Query: 130 IKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVL 189
+ S L+V+DSI ALFR DF +L +R K+ L +A F +AV
Sbjct: 231 MAEDQFS-----LLVVDSITALFRVDFSGR-GELAERQQKLAKMLSQLMKIAEEFNVAVY 284
Query: 190 VTNQVV 195
+TNQVV
Sbjct: 285 ITNQVV 290
>gi|448417201|ref|ZP_21579219.1| DNA repair and recombination protein RadA [Halosarcina pallida JCM
14848]
gi|445678424|gb|ELZ30917.1| DNA repair and recombination protein RadA [Halosarcina pallida JCM
14848]
Length = 343
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 24/200 (12%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K + P +D LGGG+ SITE+ E GSGK+Q Q+ ++ QLP HGGL S +++
Sbjct: 81 KLSWQIPEVDELLGGGLETQSITEVYGEFGSGKSQVTHQMAVNVQLPPEHGGLGGSCIFV 140
Query: 79 HTEFPFPMRRLHQL-----SHTFRPSNDH------------------NPCDYIFVQSVHS 115
+E F R+ + + + D + D I V +
Sbjct: 141 DSEDTFRPERIDDMLRGLDDEILQATMDDREIEGTPGDEAAMEELLSDVLDKIHVAKAFN 200
Query: 116 VDQLLDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISG 175
+ + + K + ++ + P+RL+ +DS+ A FR+++ ++ L +
Sbjct: 201 SNHQILLAEKAKELARDHEDDEFPVRLLCVDSLTAHFRAEYVGRGQLADRQQKLNKHLHD 260
Query: 176 MLKAMAVGFGLAVLVTNQVV 195
+++ + + VLVTNQV
Sbjct: 261 LMRIGDL-YNTVVLVTNQVA 279
>gi|294657730|ref|XP_460030.2| DEHA2E16742p [Debaryomyces hansenii CBS767]
gi|199432908|emb|CAG88286.2| DEHA2E16742p [Debaryomyces hansenii CBS767]
Length = 330
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Query: 4 PMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQ 63
P T Q L + T + G +D LGGG+ SITE+ E GKTQ C L ++AQ
Sbjct: 79 PATVQAELRSRAFT--LSTGSKQLDDVLGGGVSSMSITEVFGEFRCGKTQLCHTLCVTAQ 136
Query: 64 LPSSHGGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIM 123
LP GG Y+ TE F R+ ++ F+ D + + ++++S Q +++
Sbjct: 137 LPKEMGGSEGKVAYIDTEGTFRPDRIRSIAERFQVDADACLENISYARALNSEHQ-MELA 195
Query: 124 PKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVG 183
++ + + RL+V+DSI A FR D+ + ++ L +S +++ +A
Sbjct: 196 EQLGLQFADGT-----YRLLVVDSIMACFRVDYSGRGELNDRQQKLNQHLSSLIR-LAED 249
Query: 184 FGLAVLVTNQV 194
+ +AV +TNQV
Sbjct: 250 YNVAVFLTNQV 260
>gi|348569516|ref|XP_003470544.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog [Cavia
porcellus]
Length = 340
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYSGGKIIFID 160
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + DH+ D + ++ + ++++ + + +
Sbjct: 161 TENTFRPDRLRDIADRF--NVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG--- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 216 IFKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 271
>gi|195574316|ref|XP_002105135.1| GD21329 [Drosophila simulans]
gi|194201062|gb|EDX14638.1| GD21329 [Drosophila simulans]
Length = 267
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 16 TTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASS 75
T K G +D GGGI + EL+ SG+GKTQ CLQL L+ Q+P + GGL S+
Sbjct: 42 ATNKILTGNKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSA 101
Query: 76 LYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDY---IFVQSVHSV-----DQLLDIMPKIE 127
L++ T F RL L+ H ++ +Q +H V DQL+ +
Sbjct: 102 LFIDTRQDFHPDRLMGLALKLERQYAHRVPEFKAHKMLQKIHYVRCPKLDQLMATVLSCH 161
Query: 128 SFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLA 187
+ + + I+LIVIDS+A R ++D R L ++ ++ + LA
Sbjct: 162 RHLVDHPD----IKLIVIDSLAFTLR-----MLEDGAHRYELLLELHESMRRLQRQHELA 212
Query: 188 VLVTN 192
+ TN
Sbjct: 213 WVFTN 217
>gi|67517739|ref|XP_658655.1| hypothetical protein AN1051.2 [Aspergillus nidulans FGSC A4]
gi|40747013|gb|EAA66169.1| hypothetical protein AN1051.2 [Aspergillus nidulans FGSC A4]
Length = 892
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 7/177 (3%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GGI +TE+ ESGSGKTQF L L L+ QLP G S++Y+ TE P
Sbjct: 450 LDTLLNGGIATGYVTEVTGESGSGKTQFLLGLLLAVQLPPPQGA-GRSAIYISTEAPLAT 508
Query: 87 RRLHQL--SHTFRPSNDHNPCDYI-FVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLI 143
RL QL H + + + + S++++D L+ I ++ + R + L+
Sbjct: 509 NRLSQLIECHPYLSTLSREQAPSLGRILSINAMD--LESQDHILNYQLPVAIKRYNVGLV 566
Query: 144 VIDSIAALFRSDF-DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
VIDSI + +R++ + + L RS K+ ML+ +A +A++V NQV D E
Sbjct: 567 VIDSITSNYRAEHTSHDLSGLSTRSGELAKLGQMLRNLAASEDVAIVVANQVSDRFE 623
>gi|354505335|ref|XP_003514726.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog
[Cricetulus griseus]
Length = 340
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYSGGKIIFID 160
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + DH+ D + ++ + ++++ + + +
Sbjct: 161 TENTFRPDRLRDIADRF--NVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG--- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 216 IFKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 271
>gi|351699284|gb|EHB02203.1| Meiotic recombination protein DMC1/LIM15-like protein
[Heterocephalus glaber]
Length = 340
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYSGGKIIFID 160
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + DH+ D + ++ + ++++ + + +
Sbjct: 161 TENTFRPDRLRDIADRF--NVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG--- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 216 IFKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 271
>gi|149743044|ref|XP_001501634.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog [Equus
caballus]
Length = 340
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYSGGKIIFID 160
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + DH+ D + ++ + ++++ + + +
Sbjct: 161 TENTFRPDRLRDIADRF--NVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG--- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 216 IFKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 271
>gi|259488647|tpe|CBF88254.1| TPA: DNA repair protein (Rad57), putative (AFU_orthologue;
AFUA_1G12520) [Aspergillus nidulans FGSC A4]
Length = 554
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 7/177 (3%)
Query: 27 IDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTEFPFPM 86
+D L GGI +TE+ ESGSGKTQF L L L+ QLP G S++Y+ TE P
Sbjct: 112 LDTLLNGGIATGYVTEVTGESGSGKTQFLLGLLLAVQLPPPQGA-GRSAIYISTEAPLAT 170
Query: 87 RRLHQL--SHTFRPSNDHNPCDYI-FVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIRLI 143
RL QL H + + + + S++++D L+ I ++ + R + L+
Sbjct: 171 NRLSQLIECHPYLSTLSREQAPSLGRILSINAMD--LESQDHILNYQLPVAIKRYNVGLV 228
Query: 144 VIDSIAALFRSDF-DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
VIDSI + +R++ + + L RS K+ ML+ +A +A++V NQV D E
Sbjct: 229 VIDSITSNYRAEHTSHDLSGLSTRSGELAKLGQMLRNLAASEDVAIVVANQVSDRFE 285
>gi|73969089|ref|XP_849984.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog isoform
1 [Canis lupus familiaris]
Length = 340
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYSGGKIIFID 160
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + DH+ D + ++ + ++++ + + +
Sbjct: 161 TENTFRPDRLRDIADRF--NVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG--- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 216 IFKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 271
>gi|340345410|ref|ZP_08668542.1| DNA repair and recombination protein RadA [Candidatus
Nitrosoarchaeum koreensis MY1]
gi|339520551|gb|EGP94274.1| DNA repair and recombination protein RadA [Candidatus
Nitrosoarchaeum koreensis MY1]
Length = 387
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 11/179 (6%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
K T G +D GG+ ++TE+ E GSGKTQF L + Q P + GGL LY+
Sbjct: 87 KITTGTNCLDTLFDGGVETQALTEVYGEFGSGKTQFAHTLAVMVQKPKTEGGLDGGVLYI 146
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ ++ + I ++ +S Q L I+ + I+ ++
Sbjct: 147 DTENTFRPERIVSIAQAHEMDPEKVLDRIIVARAYNSAHQTL-ILEEAGPIIEENN---- 201
Query: 139 PIRLIVIDSIAALFRSDF--DNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
IRLIV DS LFR+++ T+ + +++ F ML +A + A + TNQV+
Sbjct: 202 -IRLIVADSAVGLFRAEYLGRGTLSNRQQKLNHFVH---MLSRIAETYNCAAIATNQVM 256
>gi|311255074|ref|XP_003126070.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog isoform
1 [Sus scrofa]
Length = 340
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYSGGKIIFID 160
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + DH+ D + ++ + ++++ + + +
Sbjct: 161 TENTFRPDRLRDIADRF--NVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG--- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 216 IFKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 271
>gi|363727814|ref|XP_425477.3| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog [Gallus
gallus]
Length = 342
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP G +++
Sbjct: 103 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGPKGYTGGKIIFID 162
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + DH+ D + ++ + ++++ + + +
Sbjct: 163 TENTFRPDRLRDIADRF--NVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG--- 217
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 218 IFKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 273
>gi|118382143|ref|XP_001024231.1| hypothetical protein TTHERM_00459230 [Tetrahymena thermophila]
gi|89305998|gb|EAS03986.1| hypothetical protein TTHERM_00459230 [Tetrahymena thermophila
SB210]
Length = 356
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 119/283 (42%), Gaps = 44/283 (15%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G +D L GGI SITE E SGKTQ + AQ H LY+
Sbjct: 110 RISTGSKALDDILNGGIESQSITEFYGEYRSGKTQIAHTACVLAQ-SQDHCQSPGKVLYI 168
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F R+ Q++ + ++ + I+ ++ ++VDQ ++ K + +
Sbjct: 169 DTEGTFRPERICQIASHYGMEGEYALSNIIYGRA-YNVDQQNTLLIKGAQLMVEEN---- 223
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
L+V+DSI A FR DF DL +R K L+ MA F +AV++TNQV +
Sbjct: 224 CFALLVVDSIMANFRCDFSGR-GDLSERQQALGKFMSRLQRMAAEFNIAVIITNQV--MA 280
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSRNEDFVVRENQMVNGGV 258
+P+ + G + +PI G A+ RLF+ + D +
Sbjct: 281 DPSGAMTGGAI-------PQPKPIG---GHILAHASTQRLFMKKKTDNI----------- 319
Query: 259 GGSGSEDFVCRRTRRSLHVVFAPHLADTSCEFEITREGVFGVE 301
R + +V +P+L D + ++ GV VE
Sbjct: 320 --------------RKVKLVDSPYLQDKEVDIMVSDRGVGDVE 348
>gi|410965553|ref|XP_003989311.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog [Felis
catus]
Length = 340
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYSGGKIIFID 160
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + DH+ D + ++ + ++++ + + +
Sbjct: 161 TENTFRPDRLRDIADRF--NVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG--- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 216 IFKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 271
>gi|194474078|ref|NP_001124039.1| meiotic recombination protein DMC1/LIM15 homolog [Rattus
norvegicus]
gi|149065923|gb|EDM15796.1| rCG59573, isoform CRA_b [Rattus norvegicus]
Length = 340
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGADGYSGGKIIFID 160
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + DH+ D + ++ + ++++ + + +
Sbjct: 161 TENTFRPDRLRDIADRF--NVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG--- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L+++DSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 216 IFKLLIVDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 271
>gi|291389878|ref|XP_002711438.1| PREDICTED: DMC1 dosage suppressor of mck1 homolog [Oryctolagus
cuniculus]
Length = 340
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGASGYPGGKIIFID 160
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + DH+ D + ++ + ++++ + + +
Sbjct: 161 TENTFRPDRLRDIADRF--NVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG--- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 216 IFKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 271
>gi|156849069|ref|XP_001647415.1| hypothetical protein Kpol_1018p90 [Vanderwaltozyma polyspora DSM
70294]
gi|156118101|gb|EDO19557.1| hypothetical protein Kpol_1018p90 [Vanderwaltozyma polyspora DSM
70294]
Length = 385
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 78/167 (46%), Gaps = 11/167 (6%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G D LGGG+ SITEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 145 TTGSKNFDTLLGGGVETGSITELFGEFRTGKSQLCHTLAVTCQLPLDIGGGEGKCLYIDT 204
Query: 81 EFPFPMRRLHQLSHTF--RPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F RL ++ F P + N Y + +LLD ++ S SR
Sbjct: 205 EGTFRPVRLVSIAQRFGLDPDDALNNVAYARAYNADHQIRLLDAAAQM------MSESRF 258
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
LIV+DS+ AL+R+DF + +L R K L+ +A FG
Sbjct: 259 S--LIVVDSVMALYRTDF-SGRGELSARQMHLAKFMRALQRLADQFG 302
>gi|1321636|dbj|BAA10970.1| DMC1 homologue [Homo sapiens]
Length = 340
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFID 160
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + DH+ D + ++ + ++++ + + +
Sbjct: 161 TENTFRPDRLRDIADRF--NVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG--- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 216 IFKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 271
>gi|391348329|ref|XP_003748400.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog
[Metaseiulus occidentalis]
Length = 289
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Query: 2 GAPMTPQNLLDNPLTTEKCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLS 61
G +T L D + + G +DR LGGG +ITE+ E GKTQ C ++
Sbjct: 33 GGFITASALCDRRRSVFRIPSGSSALDRLLGGGFESMAITEIFGEFRCGKTQICHTCCVT 92
Query: 62 AQLPSSH--GGLSASSLYLHTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQL 119
Q+P+ + GG +L++ TE F RL + H F + + I ++ +Q
Sbjct: 93 CQIPTDNYPGG---KALFIDTEHTFRPERLRDIGHRF-DLDIEAMLENILYARAYTSEQQ 148
Query: 120 LDIMPKIESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKA 179
+D++ + S RL++IDS+ ALFR DF +L +R ++ L+
Sbjct: 149 MDLLDMAAAKFHEESGV---FRLLIIDSVMALFRVDFSGR-GELAERQQKLAQLLSRLQK 204
Query: 180 MAVGFGLAVLVTNQVV 195
++ + +AV++TNQ+
Sbjct: 205 ISEEYNVAVVITNQMT 220
>gi|223995735|ref|XP_002287541.1| hypothetical protein THAPSDRAFT_261577 [Thalassiosira pseudonana
CCMP1335]
gi|220976657|gb|EED94984.1| hypothetical protein THAPSDRAFT_261577 [Thalassiosira pseudonana
CCMP1335]
Length = 285
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 97/236 (41%), Gaps = 59/236 (25%)
Query: 22 VGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHTE 81
G P +D L GG P SI+ELV +G GKT QL + A S GG ++Y+ TE
Sbjct: 56 TGLPTLDSSLLGGFPLCSISELVGRAGVGKTHLAQQLCVLAA-KSGFGG----AVYIDTE 110
Query: 82 FPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLPIR 141
+ RL +L+ ++ ++ RLP++
Sbjct: 111 KKLSLVRLRELA------------------------------------MERNTMQRLPVK 134
Query: 142 LIVIDSIAALFRSDFDNTM---------DDLKKRSFLFFKISGMLKAMAVGFGLAVLVTN 192
L+VIDSIAA R DFD + +R+ F+++ LK + LAV+V N
Sbjct: 135 LVVIDSIAAPVRRDFDMMSSSSTSKFSPNAATQRASFIFQVARKLKQLTHDHHLAVVVVN 194
Query: 193 QVVDLMEPNEGVNGLRVGNL---GCLYSSGRPICPALGIAWANCVNSRLFLSRNED 245
QV G + R N L +LG AW CV +R+ + +D
Sbjct: 195 QV------GSGGSDFRNNNPQRNNTLDIRDGEFTASLGTAWQYCVTTRIVMEHEDD 244
>gi|320166664|gb|EFW43563.1| HsLim15 [Capsaspora owczarzaki ATCC 30864]
Length = 345
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 18/224 (8%)
Query: 19 KCTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYL 78
+ + G + + LGGGI +ITE+ E +GKTQ C L ++ QLP GG ++
Sbjct: 105 RISTGSAELSKLLGGGIESMAITEIFGEFRTGKTQICHTLCVTTQLPVEVGGACGKVAFI 164
Query: 79 HTEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + + +F ++ +S Q M I + +
Sbjct: 165 DTEGTFRPDRLGPIADRFGLDRNAVLENVMFARAYNSEHQ----MDLINQCAAKFAEEKG 220
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLM 198
RL+++DS+ A+FR DF + +++ L +S ++K +A F +AV++TNQ+
Sbjct: 221 VYRLLIVDSVMAMFRVDFSGRGELAERQQRLGQMLSRLMK-IAEEFNVAVVITNQMT--A 277
Query: 199 EPNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFLSR 242
+P G L P P G A+ +RL+L +
Sbjct: 278 DPGAG-----------LTFVPDPKKPIGGNIIAHASTTRLYLRK 310
>gi|242389898|dbj|BAH80458.1| putative DMC1 protein [Lentinula edodes]
Length = 346
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 107/232 (46%), Gaps = 20/232 (8%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
+ G +D LGGGI SI+E+ E +GKTQ ++++AQLP GG S Y+
Sbjct: 109 ISTGSKSVDAILGGGIMSQSISEVYGEFRTGKTQLAHTMSVAAQLPPDLGGASGKVAYID 168
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
TE F R+ ++ F + + ++ ++ +S Q+ I F ++
Sbjct: 169 TEGTFRPDRIKAIADRFGVDGNMALENILYARAFNSEHQMELINECSLRFAEDKD----- 223
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
RL+++DSI ALFR D+ L +R ++ L ++ + + VL+TNQV +
Sbjct: 224 FRLLIVDSIMALFRVDYSGR-GKLSERQQKLAQMLSKLTKLSEEYNICVLLTNQV----Q 278
Query: 200 PNEGVNGLRVGNLGCLYSSGRPICPALGIAWANCVNSRLFL--SRNEDFVVR 249
+ G + +G + P G ++ +R+FL R E+ V +
Sbjct: 279 SDPGAT--------MTFVAGGALKPIGGHILSHASATRMFLRKGRAEERVAK 322
>gi|367001771|ref|XP_003685620.1| hypothetical protein TPHA_0E00920 [Tetrapisispora phaffii CBS 4417]
gi|357523919|emb|CCE63186.1| hypothetical protein TPHA_0E00920 [Tetrapisispora phaffii CBS 4417]
Length = 376
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G +D LGGG+ SITEL E +GK+Q C L ++ QLP GG LY+ T
Sbjct: 137 TTGSKNLDTMLGGGVETGSITELFGEFRTGKSQLCHTLAVTCQLPLDIGGGEGKCLYIDT 196
Query: 81 EFPFPMRRLHQLSHTF--RPSNDHNPCDYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
E F RL ++ F P + N Y + +LLD ++ S SR
Sbjct: 197 EGTFRPVRLVSIAQRFGLDPDDALNNVAYARAYNADHQIRLLDAAAQM------MSESRF 250
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFG 185
LI++DS+ AL+R+DF + +L R K L+ +A FG
Sbjct: 251 S--LIIVDSVMALYRTDF-SGRGELSARQMHLAKFMRALQRLADQFG 294
>gi|114686387|ref|XP_515130.2| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog [Pan
troglodytes]
gi|410348666|gb|JAA40937.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination [Pan troglodytes]
gi|410348668|gb|JAA40938.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination [Pan troglodytes]
gi|410348670|gb|JAA40939.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination [Pan troglodytes]
Length = 340
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFID 160
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + DH+ D + ++ + ++++ + + +
Sbjct: 161 TENTFRPDRLRDIADRF--NVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG--- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 216 IFKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 271
>gi|392574672|gb|EIW67807.1| hypothetical protein TREMEDRAFT_63698 [Tremella mesenterica DSM
1558]
Length = 508
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 92/199 (46%), Gaps = 26/199 (13%)
Query: 127 ESFIKNSSNSRLPIRLIVIDSIAALFRSDFDNTMD--DLKKRSFLFFKISGMLKAMAVGF 184
+S I ++ +LP++LIV+DSI AL R ++ L +RS ++ LKA+AV +
Sbjct: 248 QSTIAVHTSGKLPVKLIVLDSITALMRGTDVRSVSAIGLAQRSRYLCSVADSLKALAVAY 307
Query: 185 GLAVLVTNQVVDLME--PNEGVNGLRVGNLGCLYSSGRPICPA----------------- 225
LAV+V NQV D+ P V + P+ A
Sbjct: 308 NLAVVVINQVSDVFSRLPISTFTSSPVSQ-SVMEEDAPPMLYATQKRWFSGESDLLGKEA 366
Query: 226 -LGIAWANCVNSRLFLSRNEDFVVRENQMVNGGVGGSGS--EDFVCRRTRRSLHVVFAPH 282
LGI WAN VN+R+ LSR + + + G G GS ED RR+ H+VF P
Sbjct: 367 SLGIVWANAVNTRIMLSRTGRRRLLNQEHPSQGKKGDGSQMEDIRPTLVRRA-HLVFGPF 425
Query: 283 LADTSCEFEITREGVFGVE 301
+ ++ IT +G+ +E
Sbjct: 426 APEGMMDYVITEQGIRTLE 444
>gi|66472867|ref|NP_001018618.1| meiotic recombination protein DMC1/LIM15 homolog [Danio rerio]
gi|63852092|dbj|BAD98462.1| RecA homolog Dmc1 [Danio rerio]
Length = 342
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 9/186 (4%)
Query: 21 TVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLHT 80
T G D+ LGGG+ +ITE E +GKTQ L ++AQLP +G +++ T
Sbjct: 104 TTGSLEFDKLLGGGVESMAITEAFGEFRTGKTQLSHTLCVTAQLPGEYGYTGGKVIFIDT 163
Query: 81 EFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRLP 139
E F RL ++ F + DH D + ++ + ++++ + +
Sbjct: 164 ENTFRPERLKDIADRF--NVDHEAVLDNVLYARAYTSEHQMELLDFVAAKFHEEGG---V 218
Query: 140 IRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVVDLME 199
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+ +
Sbjct: 219 FKLLIIDSIMALFRVDFSG-RGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT--AD 275
Query: 200 PNEGVN 205
P G+
Sbjct: 276 PGAGMT 281
>gi|23238219|ref|NP_008999.2| meiotic recombination protein DMC1/LIM15 homolog [Homo sapiens]
gi|109094191|ref|XP_001094012.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog [Macaca
mulatta]
gi|397501959|ref|XP_003821641.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog [Pan
paniscus]
gi|13878923|sp|Q14565.2|DMC1_HUMAN RecName: Full=Meiotic recombination protein DMC1/LIM15 homolog
gi|40786809|gb|AAR89915.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination (yeast) [Homo sapiens]
gi|47678503|emb|CAG30372.1| DMC1 [Homo sapiens]
gi|109451232|emb|CAK54477.1| DMC1 [synthetic construct]
gi|109451810|emb|CAK54776.1| DMC1 [synthetic construct]
gi|115528933|gb|AAI25164.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination (yeast) [Homo sapiens]
gi|115529065|gb|AAI25165.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination (yeast) [Homo sapiens]
gi|119580653|gb|EAW60249.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination (yeast) [Homo sapiens]
gi|158258671|dbj|BAF85306.1| unnamed protein product [Homo sapiens]
gi|306921535|dbj|BAJ17847.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination [synthetic construct]
Length = 340
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFID 160
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + DH+ D + ++ + ++++ + + +
Sbjct: 161 TENTFRPDRLRDIADRF--NVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG--- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 216 IFKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 271
>gi|6753650|ref|NP_034189.1| meiotic recombination protein DMC1/LIM15 homolog [Mus musculus]
gi|2500100|sp|Q61880.1|DMC1_MOUSE RecName: Full=Meiotic recombination protein DMC1/LIM15 homolog
gi|961476|dbj|BAA09590.1| MmLim15 protein [Mus musculus]
gi|1321647|dbj|BAA10969.1| DMC1 homologue [Mus musculus]
gi|109732931|gb|AAI16768.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination (yeast) [Mus musculus]
gi|111601086|gb|AAI19082.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination (yeast) [Mus musculus]
gi|148672696|gb|EDL04643.1| disrupted meiotic cDNA 1 homolog, isoform CRA_a [Mus musculus]
Length = 340
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 87/177 (49%), Gaps = 7/177 (3%)
Query: 20 CTVGCPIIDRCLGGGIPCNSITELVAESGSGKTQFCLQLTLSAQLPSSHGGLSASSLYLH 79
T G D+ LGGGI +ITE E +GKTQ L ++AQLP + G +++
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGTGGYSGGKIIFID 160
Query: 80 TEFPFPMRRLHQLSHTFRPSNDHNPC-DYIFVQSVHSVDQLLDIMPKIESFIKNSSNSRL 138
TE F RL ++ F + DH D + ++ + ++++ + + +
Sbjct: 161 TENTFRPDRLRDIADRF--NVDHEAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAG--- 215
Query: 139 PIRLIVIDSIAALFRSDFDNTMDDLKKRSFLFFKISGMLKAMAVGFGLAVLVTNQVV 195
+L++IDSI ALFR DF +L +R ++ L+ ++ + +AV VTNQ+
Sbjct: 216 IFKLLIIDSIMALFRVDFSGR-GELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMT 271
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.139 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,647,041,475
Number of Sequences: 23463169
Number of extensions: 191742214
Number of successful extensions: 436571
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1639
Number of HSP's successfully gapped in prelim test: 1048
Number of HSP's that attempted gapping in prelim test: 431498
Number of HSP's gapped (non-prelim): 3210
length of query: 302
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 161
effective length of database: 9,050,888,538
effective search space: 1457193054618
effective search space used: 1457193054618
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)