Query 022156
Match_columns 302
No_of_seqs 198 out of 1441
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 14:50:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022156.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022156hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hyo_A Fumarylacetoacetate hyd 100.0 6.8E-68 2.3E-72 517.7 19.7 301 1-301 117-418 (421)
2 3lzk_A Fumarylacetoacetate hyd 100.0 5.1E-59 1.7E-63 446.8 17.3 252 2-302 93-358 (359)
3 3r6o_A 2-hydroxyhepta-2,4-dien 100.0 5.2E-52 1.8E-56 393.8 18.3 215 4-301 99-322 (329)
4 4dbf_A 2-hydroxyhepta-2,4-dien 100.0 1.5E-51 5.2E-56 384.6 15.6 206 3-300 76-288 (288)
5 3rr6_A Putative uncharacterize 100.0 7.8E-51 2.7E-55 376.1 14.8 202 2-300 59-263 (265)
6 3l53_A Putative fumarylacetoac 100.0 5.7E-50 1.9E-54 362.4 18.7 194 3-254 11-210 (224)
7 3s52_A Putative fumarylacetoac 100.0 7.8E-50 2.7E-54 360.8 16.5 199 7-298 19-221 (221)
8 2dfu_A Probable 2-hydroxyhepta 100.0 4.8E-49 1.6E-53 364.3 17.6 207 2-301 42-260 (264)
9 1wzo_A HPCE; structural genomi 100.0 1E-47 3.6E-52 351.7 17.6 205 2-300 38-245 (246)
10 1saw_A Hypothetical protein FL 100.0 2.7E-47 9.3E-52 344.8 15.9 199 10-300 22-223 (225)
11 1gtt_A 4-hydroxyphenylacetate 100.0 1E-44 3.4E-49 355.8 15.1 204 2-300 218-425 (429)
12 1gtt_A 4-hydroxyphenylacetate 100.0 8.9E-44 3.1E-48 349.0 18.4 194 10-261 6-201 (429)
13 1nkq_A Hypothetical 28.8 kDa p 100.0 3.3E-44 1.1E-48 331.0 14.2 197 6-257 8-237 (259)
14 2q18_X 2-keto-3-deoxy-D-arabin 100.0 1.3E-42 4.5E-47 325.4 15.7 210 2-301 68-290 (293)
15 2eb4_A 2-OXO-HEPT-3-ENE-1,7-di 100.0 5.2E-38 1.8E-42 290.6 8.8 195 10-297 60-266 (267)
16 2wqt_A 2-keto-4-pentenoate hyd 100.0 2.3E-36 7.8E-41 280.1 14.9 196 7-300 57-263 (270)
17 2eb4_A 2-OXO-HEPT-3-ENE-1,7-di 91.4 0.091 3.1E-06 47.7 2.7 14 266-280 226-239 (267)
18 3l53_A Putative fumarylacetoac 60.8 5 0.00017 35.3 2.9 28 243-280 182-210 (224)
19 2ja9_A Exosome complex exonucl 41.3 46 0.0016 28.0 5.8 35 264-298 47-94 (175)
20 2k52_A Uncharacterized protein 41.0 16 0.00054 26.3 2.4 54 224-280 1-57 (80)
21 2dgy_A MGC11102 protein; EIF-1 40.1 45 0.0015 26.2 5.1 16 265-280 50-65 (111)
22 1tyg_B YJBS; alpha beta barrel 38.9 41 0.0014 25.0 4.6 13 266-278 69-81 (87)
23 2zp2_A Kinase A inhibitor; KIP 34.5 35 0.0012 28.0 3.8 56 223-278 70-126 (141)
24 2qcp_X Cation efflux system pr 32.8 28 0.00097 25.5 2.7 21 266-286 51-71 (80)
25 2vb2_X Copper protein, cation 32.1 29 0.00099 25.9 2.7 21 266-286 59-79 (88)
26 3i4o_A Translation initiation 30.7 36 0.0012 25.1 2.9 17 264-280 49-65 (79)
27 4dbf_A 2-hydroxyhepta-2,4-dien 29.4 28 0.00097 31.7 2.7 14 246-259 268-281 (288)
28 2q18_X 2-keto-3-deoxy-D-arabin 27.2 34 0.0012 31.0 2.8 25 237-261 260-284 (293)
29 2k9x_A Tburm1, uncharacterized 27.0 34 0.0012 26.6 2.4 62 210-278 35-96 (110)
30 3r6o_A 2-hydroxyhepta-2,4-dien 26.4 35 0.0012 31.7 2.8 21 241-261 296-316 (329)
31 2wqt_A 2-keto-4-pentenoate hyd 25.5 37 0.0013 30.3 2.7 17 245-261 242-258 (270)
32 3esi_A Uncharacterized protein 25.4 68 0.0023 25.6 4.0 26 266-291 75-100 (129)
33 2l55_A SILB,silver efflux prot 24.8 48 0.0016 24.4 2.7 19 266-284 45-63 (82)
34 2dfu_A Probable 2-hydroxyhepta 23.8 42 0.0014 30.0 2.7 17 245-261 238-254 (264)
35 2khj_A 30S ribosomal protein S 23.3 50 0.0017 25.0 2.7 54 224-280 27-87 (109)
36 2oyn_A Hypothetical protein MJ 23.3 44 0.0015 27.6 2.5 18 267-284 120-137 (146)
37 2k4k_A GSP13, general stress p 21.2 38 0.0013 26.8 1.7 53 225-280 4-63 (130)
38 3mml_B Allophanate hydrolase s 20.5 57 0.0019 28.7 2.8 17 262-278 209-225 (228)
39 2dls_A PDZ-rhogef, RHO guanine 20.2 57 0.002 23.5 2.4 14 267-280 71-84 (93)
40 2phc_B Uncharacterized protein 20.1 60 0.0021 28.4 2.9 17 262-278 193-209 (225)
No 1
>1hyo_A Fumarylacetoacetate hydrolase; beta-sandwich roll; HET: HBU; 1.30A {Mus musculus} SCOP: b.34.8.1 d.177.1.1 PDB: 1qcn_A 2hzy_A* 1qco_A 1qqj_A
Probab=100.00 E-value=6.8e-68 Score=517.75 Aligned_cols=301 Identities=60% Similarity=1.148 Sum_probs=268.6
Q ss_pred CCCCcccCCeeeecchHHHHHHhccccCCCCCCCCCccccccceeccCCceeeeCCCeeecCCCCCCCCCCCCCCCCCCC
Q 022156 1 MLLPMEIGDYTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQ 80 (302)
Q Consensus 1 ~~~p~~~~~~~~~~ny~~H~~~~g~~~~~~~~~~~p~~f~~P~~f~k~~ss~~~~g~~i~~P~~~~~~~~~~~~~~~~~~ 80 (302)
|++|+.+++|+||.+|.+|++++++.+++.+.+.+|.|++.|++|+|++++++++|++|.+|.++..+.++..|.+.++.
T Consensus 117 ll~P~~~~~y~df~~~~~Ha~~~g~~~r~~~~~~~p~~~~~Pv~f~k~~ssvv~~g~~I~~P~~~~~~~~~~~p~~~~s~ 196 (421)
T 1hyo_A 117 MHLPATIGDYTDFYSSRQHATNVGIMFRGKENALLPNWLHLPVGYHGRASSIVVSGTPIRRPMGQMRPDNSKPPVYGACR 196 (421)
T ss_dssp EECSSCCSCEEEECCCHHHHHHHHHHHHCGGGCSCTTTTTSCCEEECCSTTEEETTCCEECCEEEECSCTTSCCEEEECS
T ss_pred EcCCcccCcEEEEechHHHHHHHHhhhccccccCCCCcCCCCEEEEcccceEEcCCCeEECCCCcccCcccccccccccc
Confidence 57899999999999999999999987665555678999999999999999999999999999765433444445556689
Q ss_pred CceeceEEEEEecCCCCCCCCCCHHHHhhhheeEEEEeecchhhhhhhhhcCCCCcccccCCCCCCCceecccccCcccC
Q 022156 81 KLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTTLSPWIVTLDALEPFAC 160 (302)
Q Consensus 81 ~ld~E~ELavvigk~l~~g~~v~~~eA~~~I~Gy~~~nD~taRd~q~~~~~~~~~~~aK~~d~~lGP~ivt~d~l~~~~~ 160 (302)
.+|||+||||||||+++.|++++++||++||+||+++||||+||+|.|++.+++|++||+|++++|||+++.++++++|.
T Consensus 197 ~lD~E~ELavvIG~~~~~g~~v~~~~A~~~I~Gy~l~ND~SaRdiQ~~e~~plg~~~aK~f~t~iGPwivt~d~l~p~~~ 276 (421)
T 1hyo_A 197 LLDMELEMAFFVGPGNRFGEPIPISKAHEHIFGMVLMNDWSARDIQQWEYVPLGPFLGKSFGTTISPWVVPMDALMPFVV 276 (421)
T ss_dssp CEECBEEEEEEECSCCCTTCCCCHHHHGGGEEEEEEEECCEEHHHHHHHCTTTCCCHHHHTCEEECSCBEEHHHHGGGEE
T ss_pred CceEEEEEEEEECcccccCCCCCHHHHHHhhcEEEEEEeccHHhhhhhhcccCCCccccCcCCCCCCeecchhhcccccc
Confidence 99999999999999977789999999999999999999999999999998888999999999999999999999999999
Q ss_pred CCCCCCCCCCccccccCCceeeEEEEEEeecCCCCCCeEEEecchhhhccCHHHHHHHHHHcCcccCCCCEEecCCCCCC
Q 022156 161 DSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGP 240 (302)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~i~l~V~~~~~~~~NGe~~q~~~t~~mi~~~~~lia~l~s~~~~L~~GDvI~TGTp~Gv 240 (302)
.+|++++++++||.++++..+.|.|++++|+++..||+++|++++++|+|+++++|+|++|++++|+|||||+||||+|+
T Consensus 277 ~~~~~~~~~l~~l~~~~~~~~~l~l~~~vN~~~~~~Ge~~q~~~~~~m~~~~~~lIa~lss~g~tL~pGDlI~TGTpsG~ 356 (421)
T 1hyo_A 277 PNPKQDPKPLPYLCHSQPYTFDINLSVSLKGEGMSQAATICRSNFKHMYWTMLQQLTHHSVNGCNLRPGDLLASGTISGS 356 (421)
T ss_dssp CCCCCSSCCCGGGCCCSCCEECCEEEEEEECTTCSSCEEEEEEETTCCSSCHHHHHHHHHTTSCCCCTTCEEECCCCCCS
T ss_pred cccccCCcccccccccCCCccceEEEEEEecCCCCCCEEEEecCHHhhcCCHHHHHHHHHHCCCccCCCCEEEcCCCCCC
Confidence 99999999999998777776556665543222222299999999999999999999998668999999999999999999
Q ss_pred ccCCCCcEEEEEecCccceee-CCCCCCCCCCCCEEEEEEEecCCCceeeeeeeeeEEeeCC
Q 022156 241 EPESLGCLLELTWNGQKPLSL-DGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPST 301 (302)
Q Consensus 241 ~~~~~Gd~le~~~~g~g~l~~-~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~l~~~vv~~~ 301 (302)
++.+.||.+|++++|++++++ +++++.|||+||+|+++++|..||++||||+|+|+|+++.
T Consensus 357 ~~~~~G~~lE~~~~G~~~v~l~~g~~~~fL~~GD~V~~~~~~~~~g~~igfG~~~~~V~~a~ 418 (421)
T 1hyo_A 357 DPESFGSMLELSWKGTKAIDVGQGQTRTFLLDGDEVIITGHCQGDGYRVGFGQCAGKVLPAL 418 (421)
T ss_dssp SGGGCCBHHHHTTTTTSCEECSTTCEESSCCTTCEEEEEEEEECSSCEEEEEEEEEEEECCC
T ss_pred CCCCCcceEEEEecCcceeeccCCCCCccCCCCCEEEEEEEECCCCceeeeeeeEEEEecCC
Confidence 999999999999999999998 4678999999999999999989999999999999999985
No 2
>3lzk_A Fumarylacetoacetate hydrolase family protein; structural genomics, PSI-2, protein structure initiative; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.1e-59 Score=446.81 Aligned_cols=252 Identities=22% Similarity=0.256 Sum_probs=215.2
Q ss_pred CCCc-ccCCeeeecchHHHHHHhccccCCCCCCCCCccccccceeccCCceeeeCCCeeecCCCCCCCCCCCCCCCCCCC
Q 022156 2 LLPM-EIGDYTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQ 80 (302)
Q Consensus 2 ~~p~-~~~~~~~~~ny~~H~~~~g~~~~~~~~~~~p~~f~~P~~f~k~~ss~~~~g~~i~~P~~~~~~~~~~~~~~~~~~ 80 (302)
+.|+ +++.|+++.||.+|++|+++.+ + .+.|+.|++.|++|+|+++++++++++|.+|.. +.
T Consensus 93 l~Pv~~~~~~~~g~NY~~Ha~e~~~~~-g--~~~p~~~~~~P~~F~k~~ssv~g~~~~I~~P~~--------------s~ 155 (359)
T 3lzk_A 93 ASPLPRAFQWADGSAYVNHVELVRKAR-N--AEMPASFWTDPLIYQGGSDSFLGPRDPILMADD--------------AW 155 (359)
T ss_dssp CCSSSSCSCEEEECCCHHHHHHHHHHT-T--CCCCGGGGTSCCEEEECCSSCBCTTSCEEESCT--------------TS
T ss_pred cCCCCCCCEEEEEcCHHHHHHHHHHhc-C--CCCCCcccCccEEEECCCceEECCCCCEECCCC--------------CC
Confidence 5677 4789999999999999998653 3 245788999999999999999999999999976 78
Q ss_pred CceeceEEEEEecCCCCCCCCCCHHHHhhhheeEEEEeecchhhhhhhhhcC-CCCcccccCCCCCCCceecccccCccc
Q 022156 81 KLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVP-LGPFLGKSFGTTLSPWIVTLDALEPFA 159 (302)
Q Consensus 81 ~ld~E~ELavvigk~l~~g~~v~~~eA~~~I~Gy~~~nD~taRd~q~~~~~~-~~~~~aK~~d~~lGP~ivt~d~l~~~~ 159 (302)
.+|||+||||||||. +++++++||++||+||+++||||+||+|.+++.+ ++|+++|+| +++|||++|+|+++++|
T Consensus 156 ~lD~E~ELavVIGk~---~~~v~~e~A~~~I~Gytl~ND~SaRD~Q~~~~~~g~~~~~~K~~-~~~gP~iVt~del~~~~ 231 (359)
T 3lzk_A 156 GIDMEGEAAVIVDDV---PMGATLDEAKAAIRLVMLVNDVSLRGLIPGELAKGFGFYQSKPS-SAFSPVAVTPEELGEAW 231 (359)
T ss_dssp CEECCEEEEEEECCB---CTTCCHHHHHHTEEEEEEEECCEETTTHHHHHHHTSCCSTTSCC-CEECSCEECHHHHGGGB
T ss_pred CeeEEEEEEEEECCC---CCCCCHHHHHhhhcEEEEEEeccHHHhhhhhhccCCCccccccc-cccCCccccHHHcCccc
Confidence 999999999999998 9999999999999999999999999999998754 799999996 56999999999987654
Q ss_pred CCCCCCCCCCCccccccCCceeeEEEEEEeecCCCCCCeEEEecc-hhhhccCHHHHHHHHHHcCcccCCCCEEecCCCC
Q 022156 160 CDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSN-FKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTIS 238 (302)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~i~l~V~~~~~~~~NGe~~q~~~-t~~mi~~~~~lia~l~s~~~~L~~GDvI~TGTp~ 238 (302)
.. ...+++|+++| |||++|+++ +++|+|+++++|+|+ |++++|+|||||+||||+
T Consensus 232 ~~---------------~~~~L~l~~~v--------NGe~~q~~~~t~~Mif~~~~lIa~l-S~~~tL~pGDvI~TGTps 287 (359)
T 3lzk_A 232 DG---------------GKLHLPLHVDL--------NGEPFGRANAGIDMTFDFPQLIVHA-ARTRPLSAGTIIGSGTVS 287 (359)
T ss_dssp CS---------------SCBCSBEEEEE--------TTEEEECCBTTSSCSSCHHHHHHHH-TTTSCBCTTEEEECCSCC
T ss_pred cC---------------CccceEEEEEE--------CCEEEEcCcCcccccCCHHHHHHHH-hCCCCcCCCCEEEcCCcC
Confidence 31 12457788876 999999999 999999999999998 999999999999999999
Q ss_pred CCccCC-----------CCcEEEEEecCccceeeCCCCCCCCCCCCEEEEEEEecCCCceeeeeeeeeEEeeCCC
Q 022156 239 GPEPES-----------LGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPSTP 302 (302)
Q Consensus 239 Gv~~~~-----------~Gd~le~~~~g~g~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~l~~~vv~~~~ 302 (302)
|+.+-. .||.+|.+ ++.++..+..+++|||+||+|++++. ++||+ ++||+|+|+|+++..
T Consensus 288 Gv~~~~~~~~~~~~~~G~~~l~E~~--~~~~~~~g~~~~~fL~~GD~V~i~~~-~~~g~-~~~G~l~n~V~~~~~ 358 (359)
T 3lzk_A 288 NKLEGGPGRPVSEGGAGYSCIAELR--MIETIEGGAPKTQFLKFGDVVRIEMK-DRTGH-SIFGAIEQKVGKYER 358 (359)
T ss_dssp CCBTTBCCCCGGGTSCBCSSHHHHH--HHHHHHHSSCCSCCBCTTCEEEEEEB-CTTSC-BSSCCEEEEEEECCC
T ss_pred CCCcccccccccccccccccchhhh--hhhhhccCCCCCCcCCCCCEEEEEEE-cCCCc-ccccceEEEEEeCCC
Confidence 995432 46766653 33344445455679999999999975 67885 679999999999753
No 3
>3r6o_A 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase; ssgcid, struc genomics, seattle structural genomics center for infectious isomerase; 1.95A {Mycobacterium abscessus}
Probab=100.00 E-value=5.2e-52 Score=393.77 Aligned_cols=215 Identities=22% Similarity=0.318 Sum_probs=181.6
Q ss_pred Ccc-cCC-eeeecchHHHHHHhccccCCCCCCCCCccccccceeccCCceeeeCCCeeecCCCCCCCCCCCCCCCCCCCC
Q 022156 4 PME-IGD-YTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQK 81 (302)
Q Consensus 4 p~~-~~~-~~~~~ny~~H~~~~g~~~~~~~~~~~p~~f~~P~~f~k~~ss~~~~g~~i~~P~~~~~~~~~~~~~~~~~~~ 81 (302)
|+. +++ |+.+.||.+|++ ++.. .|. +..|++|+|+++++++++++|.+|.. +.+
T Consensus 99 Pv~~p~kI~cvG~NY~~H~~-~g~~-----~P~----~~~P~~F~K~~~s~~g~~~~I~~P~~--------------~~~ 154 (329)
T 3r6o_A 99 PIPEPGQVIALGFNYPTHSD-TDSP-----LPK----MADPVVFMKSPTSISGPRDAVIAPRT--------------SHA 154 (329)
T ss_dssp SSSSCSCEEEEESCSTTC---------------------CCEEEEECGGGEECTTCCEEECTT--------------CSC
T ss_pred CCCCCCeEEEEcccHHHHHH-hCCC-----CCC----ccCCEEEEcccceEECCCCceECCCC--------------CCC
Confidence 443 678 777999999999 6532 222 35688999999999999999999976 789
Q ss_pred ceeceEEEEEecCCCCCCCCCCHHHHhhhheeEEEEeecchhhhhhh---hhc--CCCCcccccCCCC--CCCceecccc
Q 022156 82 LDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAW---EYV--PLGPFLGKSFGTT--LSPWIVTLDA 154 (302)
Q Consensus 82 ld~E~ELavvigk~l~~g~~v~~~eA~~~I~Gy~~~nD~taRd~q~~---~~~--~~~~~~aK~~d~~--lGP~ivt~d~ 154 (302)
+|||+||||||||+ +++++++||++||+||+++||||+||+|.. ... ..+|+++|+||++ +|||++++++
T Consensus 155 ~d~E~ELavVIGk~---~~~v~~e~A~~~I~Gytv~NDvSaRd~q~~~g~~~~~~~~~w~~aK~fd~~~plGP~ivt~de 231 (329)
T 3r6o_A 155 LDYEIEIAVVIGKP---GYRIERSQAIKHVAGYMLANDITARDVALPFGFGGSPLQAQVVRGKGYPTFCPTGPWLFTTGS 231 (329)
T ss_dssp EECCEEEEEEECSC---BSSCCGGGGGGGEEEEEEEECCEEHHHHCTTC------CCCHHHHHCSTTSEEBCSCEEECTT
T ss_pred ccEEEEEEEEECCC---CCCCCHHHHHhhheEEEEEEEeEHHHHhhhhcccccccCCccccccCcCcCcccCCeEcChhh
Confidence 99999999999999 899999999999999999999999999863 111 2578999999995 9999999998
Q ss_pred cCcccCCCCCCCCCCCccccccCCceeeEEEEEEeecCCCCCCeEEEecchhhhccCHHHHHHHHHHcCcccCCCCEEec
Q 022156 155 LEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGT 234 (302)
Q Consensus 155 l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~V~~~~~~~~NGe~~q~~~t~~mi~~~~~lia~l~s~~~~L~~GDvI~T 234 (302)
+. ++.+++|+++| |||++|++++++|+|+++++|+|+ |++++|+|||||+|
T Consensus 232 l~--------------------d~~~l~l~l~v--------NGe~~q~g~t~dMif~~~~lIa~l-S~~~tL~pGDvI~T 282 (329)
T 3r6o_A 232 DT--------------------TFETFDFELRI--------NGELRQSGSTVDMTLGFAEVVETV-SATIALRAGDIILT 282 (329)
T ss_dssp CS--------------------SCCCCEEEEEE--------TTEEEEEEEGGGCSSCHHHHHHHH-HTTSCBCTTCEEEC
T ss_pred cC--------------------ChhhcEEEEEE--------CCEEEEecCHHHhcCCHHHHHHHH-HcCCCcCCCCEEEc
Confidence 74 34678888886 999999999999999999999998 99999999999999
Q ss_pred CCCCCCccCCCCcEEEEEecCccceeeCCCCCCCCCCCCEEEEEEEecCCCceeeeeeeeeEEeeCC
Q 022156 235 GTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPST 301 (302)
Q Consensus 235 GTp~Gv~~~~~Gd~le~~~~g~g~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~l~~~vv~~~ 301 (302)
|||+|++. .+.++.|||+||+|++++. |||+|+|+|++..
T Consensus 283 GTp~GvG~-------------------~~~p~~~l~~GD~V~~ei~--------glG~l~n~V~~~~ 322 (329)
T 3r6o_A 283 GTPGGCGF-------------------QFDPPRYLRPGDVIEAHSA--------KLGKMRLPVHDEK 322 (329)
T ss_dssp CCCSCCGG-------------------GSSSCCCCCTTCEEEEEET--------TTEEEEEEEEECC
T ss_pred CCccccCC-------------------CCCCCccCCCCCEEEEEEc--------CceEEEEEEEeCC
Confidence 99999864 2456789999999999977 9999999999864
No 4
>4dbf_A 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; oxaloacetate decarboxylase; 1.90A {Corynebacterium glutamicum} PDB: 4dbh_A
Probab=100.00 E-value=1.5e-51 Score=384.65 Aligned_cols=206 Identities=22% Similarity=0.260 Sum_probs=173.3
Q ss_pred CCcccCCeee-ecchHHHHHHhccccCCCCCCCCCccccccceeccCCceeeeCCCeeecCCCCCCCCCCCCCCCCCCCC
Q 022156 3 LPMEIGDYTD-FFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQK 81 (302)
Q Consensus 3 ~p~~~~~~~~-~~ny~~H~~~~g~~~~~~~~~~~p~~f~~P~~f~k~~ss~~~~g~~i~~P~~~~~~~~~~~~~~~~~~~ 81 (302)
-|+.++++.+ +.||.+|++|+++. .+.| ..|++|.|+++++++++++|.+|.. +.+
T Consensus 76 ~Pv~p~ki~cvG~NY~~H~~E~~~~---~~~p------~~P~~F~K~~~sv~g~~~~I~~P~~--------------~~~ 132 (288)
T 4dbf_A 76 APMLPSKVVAIGRNYADHVAEVFKK---SAES------LPPTLFLKPPTAVTGPESPIRIPSF--------------ATK 132 (288)
T ss_dssp CSCCCSCEEEEESCBCC--------------C------CCCEEEEECGGGEECTTCCEEECTT--------------CCS
T ss_pred CCCCCceEEEEeccHHHHHHHhccC---CCCC------CCCEEEEeCcceeeCCCCceECCCC--------------CCc
Confidence 4667777655 79999999999841 0123 2477788889999999999999976 789
Q ss_pred ceeceEEEEEecCCCCCCCCCCHHHHhhhheeEEEEeecchhhhhhhhhcCCCCcccccCCCC--CCCceecccccCccc
Q 022156 82 LDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTT--LSPWIVTLDALEPFA 159 (302)
Q Consensus 82 ld~E~ELavvigk~l~~g~~v~~~eA~~~I~Gy~~~nD~taRd~q~~~~~~~~~~~aK~~d~~--lGP~ivt~d~l~~~~ 159 (302)
+|||+|||+||||+ +++++++||++||+||+++||+|+||+|.+.. +|+++|+||++ +|||+++..++.
T Consensus 133 ~d~E~ELavVIGk~---~~~v~~~~A~~~I~Gytv~nDvsaRd~Q~~~~---~w~~aK~fd~~~plGP~ivt~~~~~--- 203 (288)
T 4dbf_A 133 VEFEGELAVVIGKP---CKNVKADDWKSVVLGFTIINDVSSRDLQFADG---QWARAKGIDTFGPIGPWIETDINSI--- 203 (288)
T ss_dssp EECCEEEEEEECSC---BSSCCGGGGGGGEEEEEEEECCEEHHHHHHHS---SSHHHHHSTTCEEEEEEEECCGGGS---
T ss_pred eeEEEEEEEEECCC---cCCCCHHHHhhheeEEEEEEEeEhHHhhhccC---CccccccCCCCceeCCccccccccC---
Confidence 99999999999999 89999999999999999999999999998763 79999999996 999999864321
Q ss_pred CCCCCCCCCCCccccccCCceeeEEEEEEeecCCCCCC----eEEEecchhhhccCHHHHHHHHHHcCcccCCCCEEecC
Q 022156 160 CDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDS----CVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTG 235 (302)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~i~l~V~~~~~~~~NG----e~~q~~~t~~mi~~~~~lia~l~s~~~~L~~GDvI~TG 235 (302)
|+.+++|+++| || +++|++++++|+|+++++|+|+ |++++|+|||||+||
T Consensus 204 -----------------d~~~l~i~~~v--------NG~~~~e~~Q~~~t~~mi~~~~~lIa~l-S~~~tL~pGDvI~TG 257 (288)
T 4dbf_A 204 -----------------DLDNLPIKARL--------THDGETQLKQDSNSNQMIMKMGEIIEFI-TASMTLLPGDVIATG 257 (288)
T ss_dssp -----------------CTTSCEEEEEE--------EETTEEEEEEEEEGGGBSSCHHHHHHHH-HTTSCBCTTCEEECC
T ss_pred -----------------CccccEEEEEE--------cCCcceEEEEecCHHHhcCCHHHHHHHH-hCCCCcCCCCEEEcC
Confidence 35678899886 99 9999999999999999999998 999999999999999
Q ss_pred CCCCCccCCCCcEEEEEecCccceeeCCCCCCCCCCCCEEEEEEEecCCCceeeeeeeeeEEeeC
Q 022156 236 TISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 300 (302)
Q Consensus 236 Tp~Gv~~~~~Gd~le~~~~g~g~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~l~~~vv~~ 300 (302)
||+|++ +|++||+|++++. |+|+|+|+|++|
T Consensus 258 TP~Gvg--------------------------~l~~GD~v~v~ie--------giG~L~n~v~~~ 288 (288)
T 4dbf_A 258 SPAGTE--------------------------AMVDGDYIEIEIP--------GIGKLGNPVVDA 288 (288)
T ss_dssp CCSCCC--------------------------BCCTTCEEEEEET--------TTEEEEEEEEEC
T ss_pred CCCCCe--------------------------ecCCCCEEEEEEC--------CcEEEEEEEEeC
Confidence 999974 3799999999977 999999999876
No 5
>3rr6_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.58A {Mycobacterium abscessus} PDB: 3qdf_A
Probab=100.00 E-value=7.8e-51 Score=376.09 Aligned_cols=202 Identities=30% Similarity=0.333 Sum_probs=178.3
Q ss_pred CCCcccCCeee-ecchHHHHHHhccccCCCCCCCCCccccccceeccCCceeeeCCCeeecCCCCCCCCCCCCCCCCCCC
Q 022156 2 LLPMEIGDYTD-FFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQ 80 (302)
Q Consensus 2 ~~p~~~~~~~~-~~ny~~H~~~~g~~~~~~~~~~~p~~f~~P~~f~k~~ss~~~~g~~i~~P~~~~~~~~~~~~~~~~~~ 80 (302)
+-|+.++++.+ +.||.+|++|++.. .|. .|++|.|+++++++++++|.+|.. +.
T Consensus 59 l~P~~p~ki~cvG~NY~~h~~e~g~~-----~P~------~P~~F~K~~~s~~g~~~~I~~P~~--------------~~ 113 (265)
T 3rr6_A 59 LAPILASKVVAMGKNYAAHAAEMGGD-----PPE------SPVIFIKPNTSIIGPGLPIQLPPS--------------AT 113 (265)
T ss_dssp CCSSCCSCEEEESCCBCSSGGGTTSS-----CCC------CCCEEEECGGGEECTTSCEECCTT--------------CS
T ss_pred cCCCCCceEEEEEcCHHHHHHHhCCC-----CCC------CCEEEEeCcceEeCCCCceECCCC--------------CC
Confidence 34777777766 79999999999853 232 477777779999999999999976 68
Q ss_pred CceeceEEEEEecCCCCCCCCCCHHHHhhhheeEEEEeecchhhhhhhhhcCCCCcccccCCCC--CCCceecccccCcc
Q 022156 81 KLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTT--LSPWIVTLDALEPF 158 (302)
Q Consensus 81 ~ld~E~ELavvigk~l~~g~~v~~~eA~~~I~Gy~~~nD~taRd~q~~~~~~~~~~~aK~~d~~--lGP~ivt~d~l~~~ 158 (302)
++|||+|||+||||+ +++++++||++||+||+++||+|+||+|.+. .+|.++|+||++ +|||+++. ++
T Consensus 114 ~~d~E~ELavVIGk~---~~~v~~~~A~~~V~Gyt~~nDvsaRd~q~~~---~~w~~aK~fd~~~plGP~ivt~--~d-- 183 (265)
T 3rr6_A 114 EVHHEGELAIVIGRP---CKDVPAARAAENILGYTIGNDVSARDHQRAD---GQWTRAKGHDTFCPLGPWIVTD--LD-- 183 (265)
T ss_dssp CEEECEEEEEEECSC---BSSCCGGGTGGGEEEEEEEECCEEHHHHHHH---SSSHHHHHSTTCEEEEEEEESS--CC--
T ss_pred ceeEEEEEEEEECCc---CCCCCHHHHHhheeEEEEEEEeEhHHhhhcc---CCcceecccCCCcccCCcCcCC--CC--
Confidence 999999999999999 8999999999999999999999999999865 379999999996 99999873 33
Q ss_pred cCCCCCCCCCCCccccccCCceeeEEEEEEeecCCCCCCeEEEecchhhhccCHHHHHHHHHHcCcccCCCCEEecCCCC
Q 022156 159 ACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTIS 238 (302)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~V~~~~~~~~NGe~~q~~~t~~mi~~~~~lia~l~s~~~~L~~GDvI~TGTp~ 238 (302)
+.+++|+++| ||+++|++++++|+|+++++|+|+ |++++|+|||||+||||+
T Consensus 184 -------------------~~~l~i~~~v--------NGe~~q~g~t~~mi~~~~~lIa~l-S~~~tL~pGDvI~TGTp~ 235 (265)
T 3rr6_A 184 -------------------PADLEIRTEV--------NGQVRQRSRTSLLLHDVGAIVEWV-SAVMTLLPGDVILTGTPE 235 (265)
T ss_dssp -------------------GGGCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HHHSCBCTTCEEECCCCS
T ss_pred -------------------cccCEEEEEE--------CCEEEEEECHHhhcCCHHHHHHHH-hcCCCcCCCCEEEeCCCC
Confidence 3668888886 999999999999999999999998 899999999999999999
Q ss_pred CCccCCCCcEEEEEecCccceeeCCCCCCCCCCCCEEEEEEEecCCCceeeeeeeeeEEeeC
Q 022156 239 GPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 300 (302)
Q Consensus 239 Gv~~~~~Gd~le~~~~g~g~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~l~~~vv~~ 300 (302)
|++ +|++||+|++++. |+|+|+|+|+++
T Consensus 236 Gvg--------------------------~l~~GD~v~v~i~--------giG~l~n~v~~~ 263 (265)
T 3rr6_A 236 GVG--------------------------PIVDGDTVSVTIE--------GIGTLSNPVVRK 263 (265)
T ss_dssp CCE--------------------------ECCTTCEEEEEET--------TTEEEEEEEECC
T ss_pred Cce--------------------------eCCCCCEEEEEEC--------CcEEEEEEEEeC
Confidence 974 3789999999876 899999999875
No 6
>3l53_A Putative fumarylacetoacetate isomerase/hydrolase; structural genomics, PSI-2, protein structure initiative; HET: TAR; 2.10A {Oleispira antarctica} PDB: 3v77_A*
Probab=100.00 E-value=5.7e-50 Score=362.43 Aligned_cols=194 Identities=23% Similarity=0.265 Sum_probs=170.4
Q ss_pred CCcccCCeee-ecchHHHHHHhccccCCCCCCCCCccccccceeccCCceeeeCCCeeecCCCCCCCCCCCCCCCCCCCC
Q 022156 3 LPMEIGDYTD-FFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQK 81 (302)
Q Consensus 3 ~p~~~~~~~~-~~ny~~H~~~~g~~~~~~~~~~~p~~f~~P~~f~k~~ss~~~~g~~i~~P~~~~~~~~~~~~~~~~~~~ 81 (302)
||+.++++.+ +.||.+|++|+|.. .| ..|++|+|++++++++|++|.+|.. +.+
T Consensus 11 ~p~~~~ki~cvG~Ny~~h~~e~g~~-----~p------~~P~~F~K~~~s~~~~g~~I~~P~~--------------~~~ 65 (224)
T 3l53_A 11 YPRDLGKIVCVGRNYAAHAKELNNP-----IP------SSPILFIKPASSAVPFGPVFSIPKD--------------QGS 65 (224)
T ss_dssp CSSCCCEEEEEECCSHHHHHHTTCC-----CC------SSCEEEEEEGGGEEESCSEECCCSS--------------SSC
T ss_pred CCCCCCeEEEEccCHHHHHHHhCCC-----CC------CCCEEEecCCceEECCCCeEecCCC--------------CCC
Confidence 6888887655 89999999999853 23 3477777889999999999999976 679
Q ss_pred ceeceEEEEEecCCCCCCCCCCHHHHhhhheeEEEEeecchhhhhhhhhcC-CCCcccccCCCC--CCCceeccc--ccC
Q 022156 82 LDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVP-LGPFLGKSFGTT--LSPWIVTLD--ALE 156 (302)
Q Consensus 82 ld~E~ELavvigk~l~~g~~v~~~eA~~~I~Gy~~~nD~taRd~q~~~~~~-~~~~~aK~~d~~--lGP~ivt~d--~l~ 156 (302)
+|||+|||+||||+ +++++++||++||+||+++||+|+||+|.+.++. ++|.+||+||++ +|||+ +.+ ++.
T Consensus 66 ~d~E~ELavvIgk~---~~~i~~~~A~~~I~Gy~~~nDvs~Rd~q~~~~~~g~~w~~aK~fd~~~plGp~v-~~~~~~~~ 141 (224)
T 3l53_A 66 VHHELEIAILIGKA---LSRASTEQVAESIAGIGLGLDLTLRDVQDQLKEKGHPWERAKSFDGACPLTEFV-AVNLASED 141 (224)
T ss_dssp EEECEEEEEEECSC---BSSCCHHHHHHHEEEEEEEECCEEHHHHHHHHHTTCCSHHHHSSTTSEEECCBB-CCCCSSGG
T ss_pred cceEEEEEEEECCC---CCCCCHHHHHhhccEEEEEEEeEhHHhhhhhhhcCCCcceeeccCCCcccCCcE-eCchhhcC
Confidence 99999999999999 8999999999999999999999999999987643 679999999985 99975 666 553
Q ss_pred cccCCCCCCCCCCCccccccCCceeeEEEEEEeecCCCCCCeEEEecchhhhccCHHHHHHHHHHcCcccCCCCEEecCC
Q 022156 157 PFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGT 236 (302)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~V~~~~~~~~NGe~~q~~~t~~mi~~~~~lia~l~s~~~~L~~GDvI~TGT 236 (302)
|+.+++++++| ||+++|++++++|+|+++++|+|+ |++++|+|||||+|||
T Consensus 142 --------------------d~~~l~i~l~v--------NGe~~q~g~t~~mi~~~~~lia~l-S~~~tL~pGDvI~TGT 192 (224)
T 3l53_A 142 --------------------EWQAIGLTLEK--------NGQFQQQGSSAEMLFPILPLIAHM-SEHFSLQPGDVILTGT 192 (224)
T ss_dssp --------------------GGGGEEEEEEE--------TTEEEEEEEGGGCSSCHHHHHHHH-HHHSCBCTTCEEECCC
T ss_pred --------------------ChhccEEEEEE--------CCEEEEEEcHHHhcCCHHHHHHHH-HCCCCcCCCCEEEcCC
Confidence 35778898886 999999999999999999999998 8999999999999999
Q ss_pred CCCCccCCCCcEEEEEec
Q 022156 237 ISGPEPESLGCLLELTWN 254 (302)
Q Consensus 237 p~Gv~~~~~Gd~le~~~~ 254 (302)
|+|++++++||.++++++
T Consensus 193 p~Gvg~l~~GD~v~~~i~ 210 (224)
T 3l53_A 193 PAGVGPLEVGDSLSAKLS 210 (224)
T ss_dssp CSCCEECCTTCEEEEEEE
T ss_pred CCCCEEcCCCCEEEEEEE
Confidence 999988777777777777
No 7
>3s52_A Putative fumarylacetoacetate hydrolase family Pro; csgid, structural genomics, center for structural genomics O infectious diseases; 2.01A {Yersinia pestis} SCOP: d.177.1.1 PDB: 1nr9_A
Probab=100.00 E-value=7.8e-50 Score=360.81 Aligned_cols=199 Identities=19% Similarity=0.229 Sum_probs=171.9
Q ss_pred cCC-eeeecchHHHHHHhccccCCCCCCCCCccccccceeccCCceeeeCCCeeecCCCCCCCCCCCCCCCCCCCCceec
Q 022156 7 IGD-YTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFE 85 (302)
Q Consensus 7 ~~~-~~~~~ny~~H~~~~g~~~~~~~~~~~p~~f~~P~~f~k~~ss~~~~g~~i~~P~~~~~~~~~~~~~~~~~~~ld~E 85 (302)
+++ |+.+.||.+|++|||.. .| ..|++|+|++++++++|++|.+|.. +.++|||
T Consensus 19 ~~ki~~vG~Ny~~h~~e~g~~-----~p------~~P~~F~K~~~~~~~~g~~i~~p~~--------------~~~~d~E 73 (221)
T 3s52_A 19 VNKVVCVGSNYAEHIKEMGST-----AS------VEPVLFIKPETALCDIRQPVSIPKD--------------FGSVHHE 73 (221)
T ss_dssp CCEEEEEESCBHHHHHHTTCC-----CC------SSCEEEEEEGGGEEETTSCBCCCSS--------------SSCEEEC
T ss_pred CCcEEEEeCCHHHHHHHhCCC-----CC------CceEEEEcCCceEeCCCCeEECCCC--------------CCCccEE
Confidence 444 55589999999999854 23 2477778889999999999999976 6799999
Q ss_pred eEEEEEecCCCCCCCCCCHHHHhhhheeEEEEeecchhhhhhhhhc-CCCCcccccCCCC--CCCceecccccCcccCCC
Q 022156 86 LEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYV-PLGPFLGKSFGTT--LSPWIVTLDALEPFACDS 162 (302)
Q Consensus 86 ~ELavvigk~l~~g~~v~~~eA~~~I~Gy~~~nD~taRd~q~~~~~-~~~~~~aK~~d~~--lGP~ivt~d~l~~~~~~~ 162 (302)
+|||+||||+ +++++++||++||+||+++||+|+||+|.+.+. .++|.+||+||++ +|||+. .+++.
T Consensus 74 ~ELavvig~~---~~~v~~~~A~~~I~Gy~~~nDvs~Rd~q~~~~~~~~~~~~aK~~d~~~plGp~i~-~~~~~------ 143 (221)
T 3s52_A 74 IELAVLIGTP---LKQASEDRVARAIAGYGVALDLTLRELQAGFKKAGQPWEKAKAFDGSCPISGFIP-VAEFG------ 143 (221)
T ss_dssp EEEEEEECSC---BSSCCHHHHHHHEEEEEEEECCEEHHHHHHHHHHTCCSHHHHSSTTCEEECCBEE-HHHHC------
T ss_pred EEEEEEECCC---CCCCCHHHHHhhheEEEEEEEeEHHHHhhhhhccCCCcceeecCCCCccccCcee-hhhcC------
Confidence 9999999999 789999999999999999999999999997543 4789999999996 999984 56553
Q ss_pred CCCCCCCCccccccCCceeeEEEEEEeecCCCCCCeEEEecchhhhccCHHHHHHHHHHcCcccCCCCEEecCCCCCCcc
Q 022156 163 PKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEP 242 (302)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~i~l~V~~~~~~~~NGe~~q~~~t~~mi~~~~~lia~l~s~~~~L~~GDvI~TGTp~Gv~~ 242 (302)
++++++++++| |||++|++++++|+|+++++|+|+ |++++|+|||||+||||+|+++
T Consensus 144 --------------d~~~l~i~l~v--------NGe~~q~g~t~~mi~~~~~lia~l-S~~~tL~pGDvI~TGTp~Gvg~ 200 (221)
T 3s52_A 144 --------------DAQQADLSLTI--------NGEIRQQGNTRDMITPIIPLISYM-SRFFTLRAGDIVLTGTPQGVGP 200 (221)
T ss_dssp --------------CGGGCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HHHSCBCTTCEEECCCCSCCEE
T ss_pred --------------CccceEEEEEE--------CCEEEEEEcHHHccCCHHHHHHHH-hCCCCcCCCCEEEeCCCCccee
Confidence 35678898886 999999999999999999999998 8999999999999999999754
Q ss_pred CCCCcEEEEEecCccceeeCCCCCCCCCCCCEEEEEEEecCCCceeeeeeeeeEEe
Q 022156 243 ESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIV 298 (302)
Q Consensus 243 ~~~Gd~le~~~~g~g~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~l~~~vv 298 (302)
|++||+|++++. |+| |+|+|+
T Consensus 201 --------------------------l~~GD~v~~~i~--------glG-l~~~v~ 221 (221)
T 3s52_A 201 --------------------------MQSGDMLKIMLN--------GKT-VNTRII 221 (221)
T ss_dssp --------------------------ECTTCEEEEEET--------TEE-EEEEBC
T ss_pred --------------------------cCCCCEEEEEEe--------CeE-EEEEEC
Confidence 578888887765 788 888774
No 8
>2dfu_A Probable 2-hydroxyhepta-2,4-diene-1,7-dioate ISOM; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, structural GE NPPSFA; 2.20A {Thermus thermophilus}
Probab=100.00 E-value=4.8e-49 Score=364.30 Aligned_cols=207 Identities=24% Similarity=0.278 Sum_probs=171.8
Q ss_pred CCCcccCCeee-ecchHHHHHHhccccCCCCCCCCCccccccceeccCCceeeeCC---------CeeecCCCCCCCCCC
Q 022156 2 LLPMEIGDYTD-FFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISG---------TDIVRPRGQFAPSGN 71 (302)
Q Consensus 2 ~~p~~~~~~~~-~~ny~~H~~~~g~~~~~~~~~~~p~~f~~P~~f~k~~ss~~~~g---------~~i~~P~~~~~~~~~ 71 (302)
+.|+.++++.+ +.||.+|++|+++.+ +.+.| ..|++|+|++++++++| ++|.+|..
T Consensus 42 l~P~~p~~i~~~g~Ny~~H~~e~~~~~-~~~~p------~~P~~f~k~~~s~~~~~~~~rp~g~~~~i~~p~~------- 107 (264)
T 2dfu_A 42 LPPATPTKIVCVGRNYREHIREMGHDF-GEDLP------KEPGLFLKGPNALARPGNPRDPWGTAEPVPYPFF------- 107 (264)
T ss_dssp ECSCCCSCEEEECSCBC--------------CC------SSCCEEEECGGGEECCCBTTBHHHHSCCEEECSS-------
T ss_pred cCCccCCeEEEEeCcHHHHHHHhcccc-cCCCC------CCCEEEEeccceEEccCCcccccCCCcceecCCC-------
Confidence 56888999887 589999999998642 11222 24888888899999999 88888865
Q ss_pred CCCCCCCCCCceeceEEEEEecCCCCCCCCCCHHHHhhhheeEEEEeecchhhhhhhhhcCCCCcccccCCCC--CCCce
Q 022156 72 SPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTT--LSPWI 149 (302)
Q Consensus 72 ~~~~~~~~~~ld~E~ELavvigk~l~~g~~v~~~eA~~~I~Gy~~~nD~taRd~q~~~~~~~~~~~aK~~d~~--lGP~i 149 (302)
+.++|||+|||+||||+ +++++++||++||+||+++||+|+||+|.+. .+|.++|+||++ +|||+
T Consensus 108 -------~~~~d~E~ELavvig~~---~~~v~~~~a~~~I~gy~~~nDvt~Rd~q~~~---~~~~~aK~~d~~~plGp~i 174 (264)
T 2dfu_A 108 -------TEELHYEGELAVVVGDR---MRHVPPEKALDHVLGYTVAVDITARDVQKKD---LQWVRAKSADKFLPLGPWL 174 (264)
T ss_dssp -------CSCEECCEEEEEEECSC---BSSCCHHHHGGGEEEEEEEECCEEHHHHHHS---SSSHHHHCSTTCEEEEEEE
T ss_pred -------CCceeEEEEEEEEECCC---CCCCCHHHHHHHhhEeEEEEEeEhhhhhhcc---CCCceeecCCCCEEECCcC
Confidence 67899999999999999 8999999999999999999999999999874 489999999984 99999
Q ss_pred ecccccCcccCCCCCCCCCCCccccccCCceeeEEEEEEeecCCCCCCeEEEecchhhhccCHHHHHHHHHHcCcccCCC
Q 022156 150 VTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSG 229 (302)
Q Consensus 150 vt~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~V~~~~~~~~NGe~~q~~~t~~mi~~~~~lia~l~s~~~~L~~G 229 (302)
++ +++ +++++|+++| ||+++|++++++|+|+++++|+|+ |++++|+||
T Consensus 175 ~~--~~d---------------------~~~l~i~~~v--------NGe~~q~g~t~~mi~~~~~lia~l-s~~~tL~pG 222 (264)
T 2dfu_A 175 ET--DLN---------------------PQDTWVRTYV--------NGTLRQEGHTSQMIFSVAEILSYI-STFMTLEPL 222 (264)
T ss_dssp ES--SCC---------------------TTSCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HTTSCBCTT
T ss_pred cc--ccC---------------------CCccEEEEEE--------CCEEEEEecHHHhhcCHHHHHHHH-hcCCCcCCC
Confidence 97 443 4667888886 999999999999999999999998 899999999
Q ss_pred CEEecCCCCCCccCCCCcEEEEEecCccceeeCCCCCCCCCCCCEEEEEEEecCCCceeeeeeeeeEEeeCC
Q 022156 230 DLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPST 301 (302)
Q Consensus 230 DvI~TGTp~Gv~~~~~Gd~le~~~~g~g~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~l~~~vv~~~ 301 (302)
|||+||||+|++ +|++||+|++++. |+|+|+|+|+++.
T Consensus 223 DvI~TGTp~Gvg--------------------------~l~~GD~v~~~i~--------glG~l~~~v~~~~ 260 (264)
T 2dfu_A 223 DVVLTGTPEGVG--------------------------ALRPGDRLEVAVE--------GVGTLFTLIGPKE 260 (264)
T ss_dssp CEEECCCCSCCC--------------------------BCCTTCEEEEEET--------TTEEEEEEEEEEC
T ss_pred CEEEeCCCCCcc--------------------------ccCCCCEEEEEEe--------CcEEEEEEEEecC
Confidence 999999999874 3789999999876 8999999998653
No 9
>1wzo_A HPCE; structural genomics, riken structural genomics/proteom initiative, RSGI, NPPSFA, isomerase; 1.90A {Thermus thermophilus}
Probab=100.00 E-value=1e-47 Score=351.72 Aligned_cols=205 Identities=23% Similarity=0.332 Sum_probs=171.8
Q ss_pred CCCcccCCeee-ecchHHHHHHhccccCCCCCCCCCccccccceeccCCceeeeCCCeeecCCCCCCCCCCCCCCCCCCC
Q 022156 2 LLPMEIGDYTD-FFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQ 80 (302)
Q Consensus 2 ~~p~~~~~~~~-~~ny~~H~~~~g~~~~~~~~~~~p~~f~~P~~f~k~~ss~~~~g~~i~~P~~~~~~~~~~~~~~~~~~ 80 (302)
+.|+++++..+ +.||.+|++++|.. .|. .|++|.|++++++++|++|.+|.. +.
T Consensus 38 l~P~~p~~i~~vG~ny~~h~~e~g~~-----~P~------~P~~f~k~~~~~~~~g~~i~~p~~--------------~~ 92 (246)
T 1wzo_A 38 LLPFTPGKILGVALNYADHAEELGLS-----RPE------EPALFWKPNTSLLPHKGVVLYPKG--------------AR 92 (246)
T ss_dssp CCSSCCCCEEEEESCBC------CCC-----CCS------SCEEEEECGGGEECTTCCEEECTT--------------CS
T ss_pred cCCCCCCeEEEEEcChHHHHHHhCCC-----CCC------CCEEEEECcccEeCCCCeEECCCC--------------CC
Confidence 56788887554 79999999999753 222 488888889999999999999975 67
Q ss_pred CceeceEEEEEecCCCCCCCCCCHHHHhhhheeEEEEeecchhhhhhhhhcCCCCcccccCCCC--CCCceecccccCcc
Q 022156 81 KLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTT--LSPWIVTLDALEPF 158 (302)
Q Consensus 81 ~ld~E~ELavvigk~l~~g~~v~~~eA~~~I~Gy~~~nD~taRd~q~~~~~~~~~~~aK~~d~~--lGP~ivt~d~l~~~ 158 (302)
.+|||+|||+||||+ +++++++||++||+||+++||+|+||+|...+ .+|.++|+|+++ +|||++ .+++.
T Consensus 93 ~~~~E~ELavvig~~---~~~v~~~~a~~~i~g~~~~nD~s~rd~q~~~~--~~~~~~K~~d~~~~lGp~i~-~~~i~-- 164 (246)
T 1wzo_A 93 FVHYEVELAVVVGRP---MKRVRAKDALDYVLGYTIANDLVARDYVTNTF--RPPIRAKGRDTFLPLGPFLV-VEEVE-- 164 (246)
T ss_dssp CEECCEEEEEEECSC---BSSCCHHHHGGGEEEEEEEECCEEGGGC------CCCHHHHCSTTCEEEEEEEE-CSCCS--
T ss_pred ceeEEEEEEEEECCC---CCCCCHHHHHhheeEEEEEEECchHHhccccc--CCceeeccCCCCEEECCcCc-HHHcC--
Confidence 899999999999999 89999999999999999999999999997653 579999999984 999999 77763
Q ss_pred cCCCCCCCCCCCccccccCCceeeEEEEEEeecCCCCCCeEEEecchhhhccCHHHHHHHHHHcCcccCCCCEEecCCCC
Q 022156 159 ACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTIS 238 (302)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~V~~~~~~~~NGe~~q~~~t~~mi~~~~~lia~l~s~~~~L~~GDvI~TGTp~ 238 (302)
++.+++++++| ||+++|++++++|+|++.++|+|+ |++++|+|||||+||||+
T Consensus 165 ------------------d~~~l~i~~~v--------NGe~~q~g~t~~mi~~~~~lia~l-s~~~tL~pGDvI~TGTp~ 217 (246)
T 1wzo_A 165 ------------------DPQDLWLRAYV--------NGELRQEGHTSRMLYSVAELLEFI-SEFMTLEPYDVLLTGTPK 217 (246)
T ss_dssp ------------------CTTSCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HTTSCBCTTCEEECCCCC
T ss_pred ------------------CCcccEEEEEE--------CCEEEEeeCHHHhCCCHHHHHHHH-hCCCCcCCCCEEEeCCCC
Confidence 24678888886 999999999999999999999998 899999999999999999
Q ss_pred CCccCCCCcEEEEEecCccceeeCCCCCCCCCCCCEEEEEEEecCCCceeeeeeeeeEEeeC
Q 022156 239 GPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 300 (302)
Q Consensus 239 Gv~~~~~Gd~le~~~~g~g~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~l~~~vv~~ 300 (302)
|+++ |++||+|++++. |+|+|+|+|+.+
T Consensus 218 gvg~--------------------------l~~GD~v~~~i~--------glG~l~~~v~~~ 245 (246)
T 1wzo_A 218 GISQ--------------------------VRPGDVMRLEIE--------GLGALENPIEEE 245 (246)
T ss_dssp CSCE--------------------------ECTTCEEEEEET--------TSCEEEEEEEEC
T ss_pred CceE--------------------------CCCCCEEEEEEc--------CcEEEEEEEEeC
Confidence 8743 689999999876 899999999865
No 10
>1saw_A Hypothetical protein FLJ36880; structural genomics, fumarylacetoacetatehydrolase family, unknown function; 2.20A {Homo sapiens} SCOP: d.177.1.1
Probab=100.00 E-value=2.7e-47 Score=344.82 Aligned_cols=199 Identities=20% Similarity=0.249 Sum_probs=164.8
Q ss_pred eeeecchHHHHHHhccccCCCCCCCCCccccccceeccCCceeeeCCCeeecCCCCCCCCCCCCCCCCCCCCceeceEEE
Q 022156 10 YTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMA 89 (302)
Q Consensus 10 ~~~~~ny~~H~~~~g~~~~~~~~~~~p~~f~~P~~f~k~~ss~~~~g~~i~~P~~~~~~~~~~~~~~~~~~~ld~E~ELa 89 (302)
++.+.||.+|++|+|.. .|. .|++|.|++++++++|++|.+|.. +..+|||+|||
T Consensus 22 ~~vG~ny~~h~~e~g~~-----~P~------~P~~f~k~~~~~~~~g~~i~~p~~--------------~~~~~~E~ELa 76 (225)
T 1saw_A 22 VCVGRNYADHVREMRSA-----VLS------EPVLFLKPSTAYAPEGSPILMPAY--------------TRNLHHELELG 76 (225)
T ss_dssp EEESCCBC----------------C------CCCEEEEEGGGEEETTSCEECCTT--------------CSCEEECEEEE
T ss_pred EEEEeCcHHHHHHhCCC-----CCC------CCEEEECCcceeeCCCCeEECCCC--------------CCCccEEEEEE
Confidence 44589999999999754 122 378888889999999999999976 67899999999
Q ss_pred EEecCCCCCCCCCCHHHHhhhheeEEEEeecchhhhhhhhhc-CCCCcccccCCCC--CCCceecccccCcccCCCCCCC
Q 022156 90 AVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYV-PLGPFLGKSFGTT--LSPWIVTLDALEPFACDSPKQD 166 (302)
Q Consensus 90 vvigk~l~~g~~v~~~eA~~~I~Gy~~~nD~taRd~q~~~~~-~~~~~~aK~~d~~--lGP~ivt~d~l~~~~~~~~~~~ 166 (302)
+||||+ +++++++||++||+||+++||+|+||+|.+.+. .++|++||+|+++ +|||+ +.+++.
T Consensus 77 vvig~~---~~~v~~~~a~~~i~g~~~~nDvt~r~~q~~~~~~~~~~~~aK~~d~~~plGp~v-~~~~~~---------- 142 (225)
T 1saw_A 77 VVMGKR---CRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAFV-PKEKIP---------- 142 (225)
T ss_dssp EEESSC---BCSCCTTTGGGSEEEEEEEECCEEHHHHHHHHHHTCCSHHHHCSTTCEEECCCE-ETTSCS----------
T ss_pred EEECCC---CCCCCHHHHHHhheEEEecccccHHHHhhhhhccCCCceEeecCCCCEecCCcc-cHHHcC----------
Confidence 999998 899999999999999999999999999998643 3789999999986 99997 555552
Q ss_pred CCCCccccccCCceeeEEEEEEeecCCCCCCeEEEecchhhhccCHHHHHHHHHHcCcccCCCCEEecCCCCCCccCCCC
Q 022156 167 PQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLG 246 (302)
Q Consensus 167 ~~~~~~~~~~~~~~~~i~l~V~~~~~~~~NGe~~q~~~t~~mi~~~~~lia~l~s~~~~L~~GDvI~TGTp~Gv~~~~~G 246 (302)
++++++++++| ||+++|++++++|+|++.++|+|+ |++++|+|||||+||||+|+++
T Consensus 143 ----------d~~~l~l~l~v--------NGe~~q~g~~~~mi~~~~~lia~l-s~~~tL~~GDvI~TGTp~Gvg~---- 199 (225)
T 1saw_A 143 ----------DPHKLKLWLKV--------NGELRQEGETSSMIFSIPYIISYV-SKIITLEEGDIILTGTPKGVGP---- 199 (225)
T ss_dssp ----------CTTSCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HTTSCBCTTCEEECCCCSCCEE----
T ss_pred ----------CCceeEEEEEE--------CCEEEEEEcHHHcCCCHHHHHHHH-hCCCCcCCCCEEEcCCCCCcee----
Confidence 34678888886 999999999999999999999998 8999999999999999999754
Q ss_pred cEEEEEecCccceeeCCCCCCCCCCCCEEEEEEEecCCCceeeeeeeeeEEeeC
Q 022156 247 CLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 300 (302)
Q Consensus 247 d~le~~~~g~g~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~l~~~vv~~ 300 (302)
|++||+|++++. |+|+|+|+|+.+
T Consensus 200 ----------------------l~~Gd~v~~~i~--------glG~l~~~v~~~ 223 (225)
T 1saw_A 200 ----------------------VKENDEIEAGIH--------GLVSMTFKVEKP 223 (225)
T ss_dssp ----------------------ECTTCEEEEEET--------TTEEEEEEEECC
T ss_pred ----------------------CCCCCEEEEEEC--------CcEEEEEEEEEe
Confidence 588888888866 888999988765
No 11
>1gtt_A 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; lyase, bifunctional enzyme, multifunctional enzyme decarboxylase; 1.7A {Escherichia coli} SCOP: d.177.1.1 d.177.1.1 PDB: 1i7o_A
Probab=100.00 E-value=1e-44 Score=355.77 Aligned_cols=204 Identities=21% Similarity=0.263 Sum_probs=172.8
Q ss_pred CCCcccCC-eeeecchHHHHHHhccccCCCCCCCCCccccccceeccCCceeeeCCCeeecCCCCCCCCCCCCCCCCCCC
Q 022156 2 LLPMEIGD-YTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQ 80 (302)
Q Consensus 2 ~~p~~~~~-~~~~~ny~~H~~~~g~~~~~~~~~~~p~~f~~P~~f~k~~ss~~~~g~~i~~P~~~~~~~~~~~~~~~~~~ 80 (302)
+.|+. ++ |+.+.||.+|++|+|.. .|. .|++|.|++++++++|++|.+|.. +.
T Consensus 218 ~~p~~-~~i~~vG~ny~~h~~e~g~~-----~p~------~P~~f~k~~~~~~~~g~~i~~p~~--------------~~ 271 (429)
T 1gtt_A 218 LPHPH-GTLFALGLNYADHASELEFK-----PPE------EPLVFLKAPNTLTGDNQTSVRPNN--------------IE 271 (429)
T ss_dssp CSSSC-SCEEEESSCBCCC-------------CC------SCCEEEECGGGEECTTEEEEECTT--------------CS
T ss_pred cCCCC-CcEEEEEeCHHHHHHHhCCC-----CCC------CCEEEEcCcceEeCCCCeEEcCCC--------------CC
Confidence 44565 65 56689999999999853 222 478888889999999999999976 67
Q ss_pred CceeceEEEEEecCCCCCCCCCCHHHHhhhheeEEEEeecchhhh-hhhhhcCCCCcccccCCCC--CCCceecccccCc
Q 022156 81 KLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDI-QAWEYVPLGPFLGKSFGTT--LSPWIVTLDALEP 157 (302)
Q Consensus 81 ~ld~E~ELavvigk~l~~g~~v~~~eA~~~I~Gy~~~nD~taRd~-q~~~~~~~~~~~aK~~d~~--lGP~ivt~d~l~~ 157 (302)
.+|||+|||+||||+ +++++++||++||+||+++||+|+||+ |... .+|.++|+||++ +|||+++++++.
T Consensus 272 ~~~~E~Elavvig~~---~~~v~~~~a~~~i~g~~~~nD~t~Rd~lq~~~---~~w~~~K~~d~~~~lGp~iv~~~~~~- 344 (429)
T 1gtt_A 272 YMHYEAELVVVIGKQ---ARNVSEADAMDYVAGYTVCNDYAIRDYLENYY---RPNLRVKSRDGLTPMLSTIVPKEAIP- 344 (429)
T ss_dssp CEECCEEEEEEECSC---BSSCCTTTGGGGEEEEEEEECCEEGGGCCSSS---SSCHHHHSCTTCEEBCSCCEEGGGCS-
T ss_pred CccEEEEEEEEECCC---CCCCCHHHHHhhheEEEEEEEcccchhhhhhc---CCccccccCCCCEEECCcccCHHHcC-
Confidence 899999999999999 899999999999999999999999994 8643 479999999985 999999998874
Q ss_pred ccCCCCCCCCCCCccccccCCceeeEEEEEEeecCCCCCCeEEEecchhhhccCHHHHHHHHHHcCcccCCCCEEecCCC
Q 022156 158 FACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTI 237 (302)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~V~~~~~~~~NGe~~q~~~t~~mi~~~~~lia~l~s~~~~L~~GDvI~TGTp 237 (302)
++++++|+++| ||+++|++++++|+|++.++|+|+ |++++|+|||||+||||
T Consensus 345 -------------------d~~~l~i~l~v--------NGe~~q~g~~~~mi~~~~~lia~l-s~~~tL~~GDvI~TGTp 396 (429)
T 1gtt_A 345 -------------------DPHNLTLRTFV--------NGELRQQGTTADLIFSVPFLIAYL-SEFMTLNPGDMIATGTP 396 (429)
T ss_dssp -------------------CTTSCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HTTSCBCTTCEEECCCC
T ss_pred -------------------CCccceEEEEE--------CCEEEEEeCHHHcCCCHHHHHHHH-hCCCCcCCCCEEEcCCC
Confidence 24678899886 999999999999999999999998 89999999999999999
Q ss_pred CCCccCCCCcEEEEEecCccceeeCCCCCCCCCCCCEEEEEEEecCCCceeeeeeeeeEEeeC
Q 022156 238 SGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 300 (302)
Q Consensus 238 ~Gv~~~~~Gd~le~~~~g~g~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~l~~~vv~~ 300 (302)
+|++ +|++||+|++++. |||+|+|+|+++
T Consensus 397 ~gvg--------------------------~l~~GD~v~~~i~--------glG~l~~~v~~~ 425 (429)
T 1gtt_A 397 KGLS--------------------------DVVPGDEVVVEVE--------GVGRLVNRIVSE 425 (429)
T ss_dssp SCCC--------------------------BCCTTCEEEEEET--------TTEEEEEEEEEH
T ss_pred CCCe--------------------------ECCCCCEEEEEEc--------CcEEEEEEEEec
Confidence 9863 5799999999876 899999999864
No 12
>1gtt_A 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; lyase, bifunctional enzyme, multifunctional enzyme decarboxylase; 1.7A {Escherichia coli} SCOP: d.177.1.1 d.177.1.1 PDB: 1i7o_A
Probab=100.00 E-value=8.9e-44 Score=349.03 Aligned_cols=194 Identities=19% Similarity=0.134 Sum_probs=164.4
Q ss_pred eeeecchHHHHHHhccccCCCCCCCCCccccccceeccCCceeeeCCCeeecCCCCCCCCCCCCCCCCCCCCceeceEEE
Q 022156 10 YTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMA 89 (302)
Q Consensus 10 ~~~~~ny~~H~~~~g~~~~~~~~~~~p~~f~~P~~f~k~~ss~~~~g~~i~~P~~~~~~~~~~~~~~~~~~~ld~E~ELa 89 (302)
|+.+.||.+|++|++..+.... .......|++|+|++++++++|++|.+|.. ++ +|||+|||
T Consensus 6 ~cvg~Ny~~H~~e~~~~~~~~~---~~~~p~~P~~f~k~~~~~~~~g~~i~~p~~--------------~~-~~~E~Ela 67 (429)
T 1gtt_A 6 FAVALNHRSQLDAWQEAFQQSP---YKAPPKTAVWFIKPRNTVIGCGEPIPFPQG--------------EK-VLSGATVA 67 (429)
T ss_dssp EEEESCBHHHHHHHTTGGGSTT---TCSCCSSCEEEEECGGGEECTTCCEEECTT--------------CC-EECCEEEE
T ss_pred EEEechHHHHHHHhhccccccc---cCCCCCCCEEEEcCcceEEcCCCeeecCCC--------------CC-ccEEEEEE
Confidence 5568999999999986532110 001124688999999999999999999975 56 99999999
Q ss_pred EEecCCCCCCCCCCHHHHhhhheeEEEEeecchhhhhhhhhcCCCCcccccCCCC--CCCceecccccCcccCCCCCCCC
Q 022156 90 AVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTT--LSPWIVTLDALEPFACDSPKQDP 167 (302)
Q Consensus 90 vvigk~l~~g~~v~~~eA~~~I~Gy~~~nD~taRd~q~~~~~~~~~~~aK~~d~~--lGP~ivt~d~l~~~~~~~~~~~~ 167 (302)
+||||+ +++++++||++||+||+++||+|+||+|.. .+|.++|+||++ +||| +++.
T Consensus 68 vvig~~---~~~v~~~~a~~~i~gy~~~nD~s~Rd~~~~----~~~~~aK~fd~~~~lGp~----~~~~----------- 125 (429)
T 1gtt_A 68 LIVGKT---ATKVREEDAAEYIAGYALANDVSLPEESFY----RPAIKAKCRDGFCPIGET----VALS----------- 125 (429)
T ss_dssp EEECSC---BSSCCGGGGGGGEEEEEEEECCBSCCCCSS----SCCHHHHCSTTCEEBCCC----BCCS-----------
T ss_pred EEECCC---CCCCCHHHHHhHhhEEEEEEEeeehhhhcc----CCccccCCCCCCEEECCh----hhcC-----------
Confidence 999999 899999999999999999999999996632 379999999986 9999 3442
Q ss_pred CCCccccccCCceeeEEEEEEeecCCCCCCeEEEecchhhhccCHHHHHHHHHHcCcccCCCCEEecCCCCCCccCCCCc
Q 022156 168 QPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGC 247 (302)
Q Consensus 168 ~~~~~~~~~~~~~~~i~l~V~~~~~~~~NGe~~q~~~t~~mi~~~~~lia~l~s~~~~L~~GDvI~TGTp~Gv~~~~~Gd 247 (302)
++.+++|+++| ||+++|++++++|+|+++++|+|+ |++++|+|||||+||||+|++++++||
T Consensus 126 ---------d~~~l~i~~~v--------NGe~~q~g~t~~mi~~~~~li~~l-s~~~tL~~GDvI~TGTp~g~~~l~~GD 187 (429)
T 1gtt_A 126 ---------NVDNLTIYTEI--------NGRPADHWNTADLQRNAAQLLSAL-SEFATLNPGDAILLGTPQARVEIQPGD 187 (429)
T ss_dssp ---------CCTTCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HTTSCBCTTCEEECCCCSCCCEECTTC
T ss_pred ---------CccccEEEEEE--------CCEEEEeCCHHHhcCCHHHHHHHH-hcCCCcCCCCEEEEeccCcceecCCCC
Confidence 24678888886 999999999999999999999998 999999999999999999998877777
Q ss_pred EEEEEecCccceee
Q 022156 248 LLELTWNGQKPLSL 261 (302)
Q Consensus 248 ~le~~~~g~g~l~~ 261 (302)
.++++++|+|+++.
T Consensus 188 ~v~~~i~glG~l~~ 201 (429)
T 1gtt_A 188 RVRVLAEGFPPLEN 201 (429)
T ss_dssp EEEEEETTSCCEEE
T ss_pred EEEEEECCcceeEE
Confidence 77777777777654
No 13
>1nkq_A Hypothetical 28.8 kDa protein in PSD1-SKO1 intergenic region; dimer, PSI, protein structure initiative; 2.20A {Saccharomyces cerevisiae} SCOP: d.177.1.1
Probab=100.00 E-value=3.3e-44 Score=331.05 Aligned_cols=197 Identities=21% Similarity=0.221 Sum_probs=157.0
Q ss_pred ccCCee-eecchHHHHHHhccccCCCCCCCCCccccccceeccCCceeeeC------------------------C-Cee
Q 022156 6 EIGDYT-DFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVIS------------------------G-TDI 59 (302)
Q Consensus 6 ~~~~~~-~~~ny~~H~~~~g~~~~~~~~~~~p~~f~~P~~f~k~~ss~~~~------------------------g-~~i 59 (302)
++++.. .+.||.+|++|+|.. .|. .|++|.|++++++++ + ++|
T Consensus 8 ~~~ki~cvG~Ny~~H~~E~g~~-----~p~------~P~~F~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I 76 (259)
T 1nkq_A 8 AARKIICIGRNYAAHIKELNNS-----TPK------QPFFFLKPTSSIVTPLSSSLVKTTRPANSTFNGLNEDGTNPGPI 76 (259)
T ss_dssp GCCCEEEECSCBCSSGGGGGC---------------CCCEEEECGGGEEBCTTCC------CCSCSCCCCCTTSCCBCCE
T ss_pred CCCEEEEEecCHHHHHHHhCCC-----CCC------CCEEEeeChhhEecccccccccccccccccccccccccCCCCcE
Confidence 355544 489999999999854 232 377777779999998 4 888
Q ss_pred ecCCCCCCCCCCCCCCCCCCCCceeceEEEEEecCCCCCCCCCCH---HHHhhhheeEEEEeecchhhhhhhhhc-CCCC
Q 022156 60 VRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDV---NEAADHIFGVMLMNDWSARDIQAWEYV-PLGP 135 (302)
Q Consensus 60 ~~P~~~~~~~~~~~~~~~~~~~ld~E~ELavvigk~l~~g~~v~~---~eA~~~I~Gy~~~nD~taRd~q~~~~~-~~~~ 135 (302)
.+|.. + .+|||+|||+||||+ ++++++ +||++||+||+++||+|+||+|.+.+. .++|
T Consensus 77 ~~p~~--------------~-~~d~E~ELavvIg~~---~~~v~~~t~~ea~~~I~g~~~~nDvt~Rd~q~~~~~~~~~~ 138 (259)
T 1nkq_A 77 FIPRG--------------V-KVHHEIELALIVSKH---LSNVTKMKPEEVYDSISGVALALDLTARNVQDEAKKKGLPW 138 (259)
T ss_dssp EECTT--------------C-CEEECEEEEEEECSC---BCSCCCCCGGGTGGGEEEEEEEECCEEHHHHHHHHHHTCCS
T ss_pred EcCCC--------------C-cccEEEEEEEEECCC---CCCCCcCCHHHHHhhhhEEEEEEeeeHHHhhhhhhhcCCCc
Confidence 88865 4 699999999999999 777876 999999999999999999999986543 4789
Q ss_pred cccccCCCC--CCCceecccccCcccCCCCCCCCCCCccccccCC-ceeeEEEEEEeecCCCCCCeEEEecchhhhccCH
Q 022156 136 FLGKSFGTT--LSPWIVTLDALEPFACDSPKQDPQPLPYLAEKIS-KNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTL 212 (302)
Q Consensus 136 ~~aK~~d~~--lGP~ivt~d~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~V~~~~~~~~NGe~~q~~~t~~mi~~~ 212 (302)
.+||+||++ +|||+. .+++.+.+. +. .+++|+++| ||+++|++++++|+|++
T Consensus 139 ~~aK~~d~~~p~Gp~V~-~~~~~d~~~----------------dl~~~l~l~l~v--------NGe~~q~g~t~~m~~~~ 193 (259)
T 1nkq_A 139 TISKGFDTFMPISAIVS-REKFSSYKS----------------NLQDIFRVKCSV--------NGQLRQDGGTNLMLHPL 193 (259)
T ss_dssp HHHHHSTTCEEBCCCEE-GGGGGGGTT----------------CCTTTEEEEEEE--------TTEEEEEEEGGGBSSCH
T ss_pred ceeeccCcCCCcceEEE-CccccCccc----------------ccccceEEEEEE--------CCEEEEEEcHHHcCCCH
Confidence 999999984 999975 455531111 22 567888886 99999999999999999
Q ss_pred HHHHHHHHHcCcccCCCCEEecCCCCCCccCCCCcEEEEEecCcc
Q 022156 213 TQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQK 257 (302)
Q Consensus 213 ~~lia~l~s~~~~L~~GDvI~TGTp~Gv~~~~~Gd~le~~~~g~g 257 (302)
.++|+|+ |++++|+|||||+||||+|++++++||.++++++|+|
T Consensus 194 ~~Lia~l-S~~~tL~pGDvI~TGTp~Gvg~l~~GD~v~~~i~glG 237 (259)
T 1nkq_A 194 HKILQHI-STMISLEPGDIILTGTPAGVGELKPGDRVHCELLQNN 237 (259)
T ss_dssp HHHHHHH-HTTSCBCTTCEEECCCCSCCEEECTTCEEEEEEEETT
T ss_pred HHHHHHH-hCCCCcCCCCEEEeCCCCCcEecCCCCEEEEEEEcCC
Confidence 9999998 8999999999999999999866544444444444444
No 14
>2q18_X 2-keto-3-deoxy-D-arabinonate dehydratase; FAH-family fold, lyase; 2.10A {Sulfolobus solfataricus} PDB: 2q19_X 2q1a_X 2q1c_X 2q1d_X 3bqb_A
Probab=100.00 E-value=1.3e-42 Score=325.44 Aligned_cols=210 Identities=24% Similarity=0.214 Sum_probs=163.5
Q ss_pred CCCcccCCeee-ecchHH----HHHHhcc-ccCCCCCCCCCc--cccccceeccC-CceeeeCCCeeecCCCCCCCCCCC
Q 022156 2 LLPMEIGDYTD-FFSSMH----HAKNCGT-IFRGPANAVPAN--WFHLPIAYHGR-ASSVVISGTDIVRPRGQFAPSGNS 72 (302)
Q Consensus 2 ~~p~~~~~~~~-~~ny~~----H~~~~g~-~~~~~~~~~~p~--~f~~P~~f~k~-~ss~~~~g~~i~~P~~~~~~~~~~ 72 (302)
+-|+.++++.+ +.||.+ |++|++. + .+.+. ++. ....|++|+|+ +++++++|++|.+|..
T Consensus 68 l~Pv~p~~i~~vG~NY~~~~~~h~~e~~~~~-~~~~~--~~~~~~~~~P~~F~k~~~~~~~g~~~~i~~p~~-------- 136 (293)
T 2q18_X 68 TKPIDPPEVWGSGISYEMARERYSEENVAKI-LGKTI--YEKVYDAVRPEIFFKATPNRCVGHGEAIAVRSD-------- 136 (293)
T ss_dssp CCSSCCSCEEEEESCBC---------CCCEE-TTEEH--HHHHHHSSSCEEEEEECGGGEECTTSCEEECTT--------
T ss_pred eCCcCcceEEEEEechhhhhHHHHHHhcccc-ccccc--cccccCCCCCEEEECCCCCeEecCCCEEEcCCC--------
Confidence 34666777766 699997 8888862 1 11100 000 01347788885 6999999999999976
Q ss_pred CCCCCCCCCceeceEEEEEecCCCCCCCCCCHHHHhhhheeEEEEeecchhhhhhhhhcCCCCcccccCCCC--CCCcee
Q 022156 73 PPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTT--LSPWIV 150 (302)
Q Consensus 73 ~~~~~~~~~ld~E~ELavvigk~l~~g~~v~~~eA~~~I~Gy~~~nD~taRd~q~~~~~~~~~~~aK~~d~~--lGP~iv 150 (302)
+.++|||+|||+||||+ + +|+||+++||+|+||+|.+.. .+|.+||+||++ +|||++
T Consensus 137 ------~~~~d~E~ELavvIg~~---~----------~i~Gyt~~nDvs~Rd~q~~~~--~~~~~aK~~d~~~plGP~iv 195 (293)
T 2q18_X 137 ------SEWTLPEPELAVVLDSN---G----------KILGYTIMDDVSARDLEAENP--LYLPQSKIYAGCCAFGPVIV 195 (293)
T ss_dssp ------CSCEECCEEEEEEECTT---C----------CEEEEEEEEECEEHHHHHHCG--GGHHHHHCSTTCEEEEEEEE
T ss_pred ------CCCcceEEEEEEEECCC---C----------cCceEEEEEEeEeehhhhhcc--cCccccccCCCCEEECCcEe
Confidence 67899999999999998 5 399999999999999998642 346699999985 999999
Q ss_pred cccccCcccCCCCCCCCCCCccccccCCceeeEEEEEEeecCCCCCCeEEEec--chhhhccCHHHHHHHHHHcCcccCC
Q 022156 151 TLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRS--NFKYLYWTLTQQLAHHTINGCNLRS 228 (302)
Q Consensus 151 t~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~V~~~~~~~~NGe~~q~~--~t~~mi~~~~~lia~l~s~~~~L~~ 228 (302)
+++++. ++.+++|+|+|+ +||+++|++ ++++|+|+++++|+|+ |++++|+|
T Consensus 196 t~dei~--------------------d~~~l~i~l~v~------~NGe~~q~g~~~t~~mi~~~~~li~~l-s~~~tL~p 248 (293)
T 2q18_X 196 TSDEIK--------------------NPYSLDITLKIV------REGRVFFEGSVNTNKMRRKIEEQIQYL-IRDNPIPD 248 (293)
T ss_dssp CGGGCS--------------------CTTSCEEEEEEE------ETTEEEEEEEEEGGGBCSCHHHHHHHH-HTTCCCCT
T ss_pred CHHHcC--------------------CcceeEEEEEEE------ECCEEEEECCCCHHHhccCHHHHHHHH-HcCCCCCC
Confidence 998763 246788888763 499999998 6999999999999998 89999999
Q ss_pred CCEEecCCCCCCccCCCCcEEEEEecCccceeeCCCCCCCCCCCCEEEEEEEecCCCceeeeeeeeeEEeeCC
Q 022156 229 GDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPST 301 (302)
Q Consensus 229 GDvI~TGTp~Gv~~~~~Gd~le~~~~g~g~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~l~~~vv~~~ 301 (302)
||||+|||. .++ ....||++||+|++++. |||+|+|+|+..+
T Consensus 249 GDvI~TGTg--~~p---------------------~~~~~l~~GD~v~~~i~--------glG~l~n~v~~~~ 290 (293)
T 2q18_X 249 GTILTTGTA--IVP---------------------GRDKGLKDEDIVEITIS--------NIGTLITPVKKRR 290 (293)
T ss_dssp TEEEECCCS--CCC---------------------CTTCCCCTTCEEEEEET--------TTEEEEEEEEECC
T ss_pred CCEEECCCC--CCC---------------------CCCcccCCCCEEEEEEc--------CcEEEEEEEEeee
Confidence 999999992 111 12478999999999977 9999999999764
No 15
>2eb4_A 2-OXO-HEPT-3-ENE-1,7-dioate hydratase; lyase; 1.60A {Escherichia coli} PDB: 2eb5_A 2eb6_A
Probab=100.00 E-value=5.2e-38 Score=290.58 Aligned_cols=195 Identities=12% Similarity=0.035 Sum_probs=153.7
Q ss_pred eeeecchHHHHHHhccccCCCCCCCCCccccccceeccCCceeeeCCCeeecCCCCCCCCCCCCCCCCCCCCceeceEEE
Q 022156 10 YTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMA 89 (302)
Q Consensus 10 ~~~~~ny~~H~~~~g~~~~~~~~~~~p~~f~~P~~f~k~~ss~~~~g~~i~~P~~~~~~~~~~~~~~~~~~~ld~E~ELa 89 (302)
|.-+.||..|.+++|.. .|.+ +....++++++|++|.+|.. ..++||+|||
T Consensus 60 ~KiGl~~~~~~~~~g~~--------~P~~------~~l~~~~~~~~g~~i~~p~~---------------~~~~~E~ELa 110 (267)
T 2eb4_A 60 HKIGLTSKAMQASSQIS--------EPDY------GALLDDMFFHDGSDIPTDRF---------------IVPRIEVELA 110 (267)
T ss_dssp EEEECHHHHHCSSCCCC--------SCEE------EEEEGGGEECTTEEECGGGC---------------SSCEEEEEEE
T ss_pred EEeccCCHHHHHHhCCC--------CCcE------EEEechheecCCCeecCCcc---------------CcccEeeEEE
Confidence 33578999998888753 3333 23337899999999998864 3689999999
Q ss_pred EEecCCCCCCCCCCHHHHhhhheeEEEEeecchhhhhhhhh-----cCCCCcccccC-CC--CCCCceecccccCcccCC
Q 022156 90 AVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEY-----VPLGPFLGKSF-GT--TLSPWIVTLDALEPFACD 161 (302)
Q Consensus 90 vvigk~l~~g~~v~~~eA~~~I~Gy~~~nD~taRd~q~~~~-----~~~~~~~aK~~-d~--~lGP~ivt~d~l~~~~~~ 161 (302)
|||||+++ +++++++||++||+||+++||+++|+++.|.. ..+.|..+|+. ++ ++|||++++++++
T Consensus 111 ~vig~~l~-~~~vt~~~a~~~v~g~~~~~ei~d~r~~~~~~~~~~~~~~~~~~Ad~~~~~~~~lGp~~v~~~~~d----- 184 (267)
T 2eb4_A 111 FVLAKPLR-GPNCTLFDVYNATDYVIPALELIDARCHNIDPETQRPRKVFDTISDNAANAGVILGGRPIKPDELD----- 184 (267)
T ss_dssp EEESSCBC-CSSCCHHHHHHHEEEEEEEEEEECCSBCCC------CCHHHHHHHTGGGEEEEEECSCCBCTTSSC-----
T ss_pred EEECCCCC-CCCCCHHHHHHhhceEEEEEEeecccccccccccccccCccceeecccccccEEECCCcCCcccCC-----
Confidence 99999976 68999999999999999999999998888764 22446677754 33 3999999887653
Q ss_pred CCCCCCCCCccccccCCceeeEEEEEEeecCCCCCCeEEEecchhhhccCHHHHHHHHH----HcCcccCCCCEEecCCC
Q 022156 162 SPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHT----INGCNLRSGDLLGTGTI 237 (302)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~i~l~V~~~~~~~~NGe~~q~~~t~~mi~~~~~lia~l~----s~~~~L~~GDvI~TGTp 237 (302)
+.++.++|+| |||++|+|++++|+|++.++|+||+ +++++|+|||||+||||
T Consensus 185 ----------------~~~l~~~l~v--------NGe~~q~g~t~~ml~~p~~~i~~ls~~l~~~g~tL~~GDvI~TGT~ 240 (267)
T 2eb4_A 185 ----------------LRWISALMYR--------NGVIEETGVAAGVLNHPANGVAWLANKLAPYDVQLEAGQIILGGSF 240 (267)
T ss_dssp ----------------GGGCEEEEEE--------TTEEEEEEEGGGTTTSTTHHHHHHHHHHGGGTCCBCTTCEEECCCS
T ss_pred ----------------hhhCeEEEEE--------CCEEEEEecHHhcccCHHHHHHHHHHHHHHcCCCCCCCCEEECCCC
Confidence 4678899987 9999999999999999999999983 23559999999999999
Q ss_pred CCCccCCCCcEEEEEecCccceeeCCCCCCCCCCCCEEEEEEEecCCCceeeeeeeeeEE
Q 022156 238 SGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKI 297 (302)
Q Consensus 238 ~Gv~~~~~Gd~le~~~~g~g~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~l~~~v 297 (302)
.|+. +|++||+|++++. |+|+|+|++
T Consensus 241 ~g~~--------------------------~l~~GD~v~~~i~--------glG~l~~~~ 266 (267)
T 2eb4_A 241 TRPV--------------------------PARKGDTFHVDYG--------NMGSISCRF 266 (267)
T ss_dssp SCCE--------------------------ECCTTCEEEEECG--------GGCEEEEEE
T ss_pred CCCE--------------------------ECCCCCEEEEEEc--------CCCeEEEEE
Confidence 8864 4566666666644 666666665
No 16
>2wqt_A 2-keto-4-pentenoate hydratase; lyase, dodecahedral form, aromatic hydrocarbons catabolism; 2.80A {Escherichia coli} PDB: 1sv6_A
Probab=100.00 E-value=2.3e-36 Score=280.08 Aligned_cols=196 Identities=13% Similarity=0.070 Sum_probs=154.4
Q ss_pred cCCeeeecchHHHHHHhccccCCCCCCCCCccccccceeccCCceeeeCCCeeecCCCCCCCCCCCCCCCCCCCCceece
Q 022156 7 IGDYTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFEL 86 (302)
Q Consensus 7 ~~~~~~~~ny~~H~~~~g~~~~~~~~~~~p~~f~~P~~f~k~~ss~~~~g~~i~~P~~~~~~~~~~~~~~~~~~~ld~E~ 86 (302)
+.-|-.+.||.+|+++||.. .| ..|++|.| +++++|++|.+|.. .+++||+
T Consensus 57 i~g~KiGln~~~h~~e~g~~--------~P---~~~~lf~~---~~~~~g~~i~~p~~---------------~~~~~E~ 107 (270)
T 2wqt_A 57 VVGRKVGLTHPKVQQQLGVD--------QP---DFGTLFAD---MCYGDNEIIPFSRV---------------LQPRIEA 107 (270)
T ss_dssp EEEEEEECCSHHHHHTTTCS--------SC---EEEEEEGG---GEEETTEEECGGGS---------------SSCEEEE
T ss_pred eEEeEecCCCHHHHHHhCCC--------CC---CEEEEech---heeCCCCeeecCcc---------------Cccceee
Confidence 33345689999999999853 22 23666754 78899999998864 4789999
Q ss_pred EEEEEecCCCCCCCCCCHHHHhh---hheeEEEEeecchhhhhhhhhcCCCCcccccCCC---CCCCceecccccCcccC
Q 022156 87 EMAAVVGPGNELGKPIDVNEAAD---HIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGT---TLSPWIVTLDALEPFAC 160 (302)
Q Consensus 87 ELavvigk~l~~g~~v~~~eA~~---~I~Gy~~~nD~taRd~q~~~~~~~~~~~aK~~d~---~lGP~ivt~d~l~~~~~ 160 (302)
||||||||+++ +++++++||++ +|++|+..||.+.|+||... .+..|||+.+ ++|||++++++++
T Consensus 108 ELa~vig~~~~-g~~vt~~~a~~ai~~v~~~~ei~D~~~~~~~~k~----~d~~aDn~s~~~~~lGp~~v~~~~~d---- 178 (270)
T 2wqt_A 108 EIALVLNRDLP-ATDITFDELYNAIEWVLPALEVVGSRIRDWSIQF----VDTVADNASCGVYVIGGPAQRPAGLD---- 178 (270)
T ss_dssp EEEEEESSCBC-CTTCCHHHHHTTEEEEEEEEEEECCSBGGGCCCH----HHHHHTGGGCCEEEECBCCBCSTTCC----
T ss_pred EEEEEECCCCC-CCCCCHHHHHHhhCeEEEEEEEEcCcccccCCCh----hcEEccCccCCCEeECcCcCCcccCC----
Confidence 99999999976 68999999998 66677777777778876321 2445666655 4999999887763
Q ss_pred CCCCCCCCCCccccccCCceeeEEEEEEeecCCCCCCeEEEecchhhhccCHHHHHHHHHHc-----CcccCCCCEEecC
Q 022156 161 DSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTIN-----GCNLRSGDLLGTG 235 (302)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~i~l~V~~~~~~~~NGe~~q~~~t~~mi~~~~~lia~l~s~-----~~~L~~GDvI~TG 235 (302)
+.++.++|+| ||+++|+|++++|+|+|.++|+|+ |+ +++|+|||||+||
T Consensus 179 -----------------~~~l~i~l~v--------NGe~~q~g~~~~ml~~p~~~v~~l-s~~l~~~g~tL~~GdvI~TG 232 (270)
T 2wqt_A 179 -----------------LKNCAMKMTR--------NNEEVSSGRGSECLGHPLNAAVWL-ARKMASLGEPLRTGDIILTG 232 (270)
T ss_dssp -----------------CSSCEEEEEE--------TTEEEEEEEGGGTTTSHHHHHHHH-HHHHHHTTCCBCTTCEEEEE
T ss_pred -----------------hhhCeEEEEE--------CCEEEEEEchhhccCCHHHHHHHH-HHHHHhcCCCcCCCCEEEcC
Confidence 4668899886 999999999999999999999998 55 7999999999999
Q ss_pred CCCCCccCCCCcEEEEEecCccceeeCCCCCCCCCCCCEEEEEEEecCCCceeeeeeeeeEEeeC
Q 022156 236 TISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 300 (302)
Q Consensus 236 Tp~Gv~~~~~Gd~le~~~~g~g~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~l~~~vv~~ 300 (302)
||.|+ .+|++||+|++++. |+|+++|+|++.
T Consensus 233 T~~g~--------------------------~~l~~GD~v~~~i~--------glG~l~~~v~~~ 263 (270)
T 2wqt_A 233 ALGPM--------------------------VAVNAGDRFEAHIE--------GIGSVAATFSSA 263 (270)
T ss_dssp ESSCC--------------------------EECCTTCEEEEEET--------TTEEEEEEECC-
T ss_pred CCCCC--------------------------eeCCCCCEEEEEEc--------CCceEEEEEEeC
Confidence 99885 45677777777755 677777777653
No 17
>2eb4_A 2-OXO-HEPT-3-ENE-1,7-dioate hydratase; lyase; 1.60A {Escherichia coli} PDB: 2eb5_A 2eb6_A
Probab=91.42 E-value=0.091 Score=47.70 Aligned_cols=14 Identities=29% Similarity=0.190 Sum_probs=10.7
Q ss_pred CCCCCCCCEEEEEEE
Q 022156 266 RKFLEDGDEVTFTGF 280 (302)
Q Consensus 266 ~~~L~~GD~V~~~~~ 280 (302)
...|+|||.|.. ++
T Consensus 226 g~tL~~GDvI~T-GT 239 (267)
T 2eb4_A 226 DVQLEAGQIILG-GS 239 (267)
T ss_dssp TCCBCTTCEEEC-CC
T ss_pred CCCCCCCCEEEC-CC
Confidence 458999999973 44
No 18
>3l53_A Putative fumarylacetoacetate isomerase/hydrolase; structural genomics, PSI-2, protein structure initiative; HET: TAR; 2.10A {Oleispira antarctica} PDB: 3v77_A*
Probab=60.76 E-value=5 Score=35.29 Aligned_cols=28 Identities=25% Similarity=0.074 Sum_probs=19.3
Q ss_pred CCCCcEEEE-EecCccceeeCCCCCCCCCCCCEEEEEEE
Q 022156 243 ESLGCLLEL-TWNGQKPLSLDGFTRKFLEDGDEVTFTGF 280 (302)
Q Consensus 243 ~~~Gd~le~-~~~g~g~l~~~~~~~~~L~~GD~V~~~~~ 280 (302)
+.+||.+-. +..| ...|++||+|++++.
T Consensus 182 L~pGDvI~TGTp~G----------vg~l~~GD~v~~~i~ 210 (224)
T 3l53_A 182 LQPGDVILTGTPAG----------VGPLEVGDSLSAKLS 210 (224)
T ss_dssp BCTTCEEECCCCSC----------CEECCTTCEEEEEEE
T ss_pred cCCCCEEEcCCCCC----------CEEcCCCCEEEEEEE
Confidence 678886632 2222 335999999999977
No 19
>2ja9_A Exosome complex exonuclease RRP40; RNA-binding protein, RNA, S1 domain, KH domain, hydrolase, RNA-binding, nuclear protein; 2.20A {Saccharomyces cerevisiae} SCOP: b.40.4.5 d.51.1.1
Probab=41.26 E-value=46 Score=28.00 Aligned_cols=35 Identities=29% Similarity=0.400 Sum_probs=24.7
Q ss_pred CCCCCCCCCCEEEEEEE-----------ecC--CCceeeeeeeeeEEe
Q 022156 264 FTRKFLEDGDEVTFTGF-----------CKG--NGYTVGFGTCSGKIV 298 (302)
Q Consensus 264 ~~~~~L~~GD~V~~~~~-----------~~~--~~~~~~~G~l~~~vv 298 (302)
+.+++|++||.|..++. |-. .+++-+||.|+|-++
T Consensus 47 ~~r~~l~~GDlV~ArV~~~~~~~~~~Ltc~~~~~~r~~~lG~L~~G~l 94 (175)
T 2ja9_A 47 KNRPTLQVGDLVYARVCTAEKELEAEIECFDSTTGRDAGFGILEDGMI 94 (175)
T ss_dssp SSCCCCCTTCEEEEEEEECCTTSCCEEESSCTTTCSCTTCEEECSCEE
T ss_pred hhhccCCCCCEEEEEEEEecCCCceEEEecccccccccCCcCcCCCEE
Confidence 45889999999997763 211 256668888887654
No 20
>2k52_A Uncharacterized protein MJ1198; metal-binding, zinc, zinc-finger, structural genomics, PSI-2, protein structure initiative; NMR {Methanocaldococcus jannaschii}
Probab=40.97 E-value=16 Score=26.33 Aligned_cols=54 Identities=19% Similarity=0.282 Sum_probs=31.1
Q ss_pred cccCCCCEEecCCCCCCccCCCCcEEEEE--ecCccceee-CCCCCCCCCCCCEEEEEEE
Q 022156 224 CNLRSGDLLGTGTISGPEPESLGCLLELT--WNGQKPLSL-DGFTRKFLEDGDEVTFTGF 280 (302)
Q Consensus 224 ~~L~~GDvI~TGTp~Gv~~~~~Gd~le~~--~~g~g~l~~-~~~~~~~L~~GD~V~~~~~ 280 (302)
+.++.||+ +.|+..++.+ -|..+++. ++|+-.++- .......++.||.|++.+.
T Consensus 1 m~~~~G~i-v~G~V~~v~~--~G~fV~l~~~~~Gllh~sel~~~~~~~~~~Gd~V~v~V~ 57 (80)
T 2k52_A 1 MDVEPGKF-YKGVVTRIEK--YGAFINLNEQVRGLLRPRDMISLRLENLNVGDEIIVQAI 57 (80)
T ss_dssp CCCCTTCE-EEEEEEEEET--TEEEEEEETTEEEEECGGGCSSCCGGGCCTTCEEEEEEE
T ss_pred CCCCCCCE-EEEEEEEEeC--CEEEEEECCCCEEEEEHHHCCcccceeeCCCCEEEEEEE
Confidence 35678887 6778776644 35555543 233322221 1111147999999999875
No 21
>2dgy_A MGC11102 protein; EIF-1A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.14 E-value=45 Score=26.16 Aligned_cols=16 Identities=13% Similarity=0.287 Sum_probs=14.1
Q ss_pred CCCCCCCCCEEEEEEE
Q 022156 265 TRKFLEDGDEVTFTGF 280 (302)
Q Consensus 265 ~~~~L~~GD~V~~~~~ 280 (302)
...|+++||.|.++.+
T Consensus 50 k~IwI~~GD~VlVe~~ 65 (111)
T 2dgy_A 50 KNIWIKRGDFLIVDPI 65 (111)
T ss_dssp SCCCCCSSCEEEEEEC
T ss_pred ccEEEcCCCEEEEEec
Confidence 5899999999999854
No 22
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=38.87 E-value=41 Score=25.04 Aligned_cols=13 Identities=23% Similarity=0.164 Sum_probs=10.8
Q ss_pred CCCCCCCCEEEEE
Q 022156 266 RKFLEDGDEVTFT 278 (302)
Q Consensus 266 ~~~L~~GD~V~~~ 278 (302)
...|++||+|++=
T Consensus 69 ~~~L~dGD~Vei~ 81 (87)
T 1tyg_B 69 EVELCDRDVIEIV 81 (87)
T ss_dssp TSBCCSSSEEEEE
T ss_pred CcCCCCCCEEEEE
Confidence 4679999999973
No 23
>2zp2_A Kinase A inhibitor; KIPI, histidine kinase inhibitor, ATP-binding, nucleotide- binding, protein kinase inhibitor, sporulation; 3.01A {Bacillus subtilis}
Probab=34.53 E-value=35 Score=27.99 Aligned_cols=56 Identities=18% Similarity=0.150 Sum_probs=29.2
Q ss_pred CcccCCCCEEecCCCCCCccC-CCCcEEEEEecCccceeeCCCCCCCCCCCCEEEEE
Q 022156 223 GCNLRSGDLLGTGTISGPEPE-SLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFT 278 (302)
Q Consensus 223 ~~~L~~GDvI~TGTp~Gv~~~-~~Gd~le~~~~g~g~l~~~~~~~~~L~~GD~V~~~ 278 (302)
.....+|.|-+-|.-.++-+. .||----+--.-+.-....+.++..|++||+|+..
T Consensus 70 R~~vPaGsVgiaG~qt~IYp~~sPGGWqliGrTp~~lfd~~~~~p~ll~~GD~VrF~ 126 (141)
T 2zp2_A 70 RPSIPAGSVGIAGLQTGVYPISTPGGWQLIGKTPLALFRPQENPPTLLRAGDIVKFV 126 (141)
T ss_dssp CSCCCTTEEEEEBTEEEECSSCCCCCCEEEEECSCC---------CCSCTTCEEEEE
T ss_pred ccccCCceEEEcCceEEEECCCCCCcceEecccChhhhCCCCCCCcccCCCCEEEEE
Confidence 345677777777777777664 34442111111111122256789999999999986
No 24
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=32.83 E-value=28 Score=25.46 Aligned_cols=21 Identities=29% Similarity=0.328 Sum_probs=14.9
Q ss_pred CCCCCCCCEEEEEEEecCCCc
Q 022156 266 RKFLEDGDEVTFTGFCKGNGY 286 (302)
Q Consensus 266 ~~~L~~GD~V~~~~~~~~~~~ 286 (302)
..-|++||.|+++....++|+
T Consensus 51 l~~lk~Gd~V~F~~~~~~~~~ 71 (80)
T 2qcp_X 51 MSEIKTGDKVAFNFVQQGNLS 71 (80)
T ss_dssp ECCCCTTCEEEEEEEEETTEE
T ss_pred hhcCCCCCEEEEEEEEeCCEE
Confidence 455899999999866444333
No 25
>2vb2_X Copper protein, cation efflux system protein CUSF; cation PI, metal-binding, metal transport, copper tolerance, transport; 1.70A {Escherichia coli} PDB: 2vb3_X
Probab=32.14 E-value=29 Score=25.91 Aligned_cols=21 Identities=29% Similarity=0.328 Sum_probs=14.9
Q ss_pred CCCCCCCCEEEEEEEecCCCc
Q 022156 266 RKFLEDGDEVTFTGFCKGNGY 286 (302)
Q Consensus 266 ~~~L~~GD~V~~~~~~~~~~~ 286 (302)
..-|++||.|+++....++|+
T Consensus 59 l~~lk~Gd~V~F~~~~~~~~~ 79 (88)
T 2vb2_X 59 MSEIKTGDKVAFNFVQQGNLS 79 (88)
T ss_dssp ECCCCTTCEEEEEEEEETTEE
T ss_pred hhcCCCCCEEEEEEEEeCCEE
Confidence 455899999999866444333
No 26
>3i4o_A Translation initiation factor IF-1; cytoplasm, protein biosynthesis; 1.47A {Mycobacterium tuberculosis} SCOP: b.40.4.5
Probab=30.71 E-value=36 Score=25.12 Aligned_cols=17 Identities=12% Similarity=-0.197 Sum_probs=14.1
Q ss_pred CCCCCCCCCCEEEEEEE
Q 022156 264 FTRKFLEDGDEVTFTGF 280 (302)
Q Consensus 264 ~~~~~L~~GD~V~~~~~ 280 (302)
....|+.+||.|.++.+
T Consensus 49 k~~I~Il~GD~V~ve~~ 65 (79)
T 3i4o_A 49 QHYIRILPEDRVVVELS 65 (79)
T ss_dssp HTTCCCCTTCEEEEEEE
T ss_pred cCCccCCCCCEEEEEEC
Confidence 34778999999999865
No 27
>4dbf_A 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; oxaloacetate decarboxylase; 1.90A {Corynebacterium glutamicum} PDB: 4dbh_A
Probab=29.42 E-value=28 Score=31.74 Aligned_cols=14 Identities=29% Similarity=0.401 Sum_probs=6.3
Q ss_pred CcEEEEEecCccce
Q 022156 246 GCLLELTWNGQKPL 259 (302)
Q Consensus 246 Gd~le~~~~g~g~l 259 (302)
||.++++++|+|++
T Consensus 268 GD~v~v~iegiG~L 281 (288)
T 4dbf_A 268 GDYIEIEIPGIGKL 281 (288)
T ss_dssp TCEEEEEETTTEEE
T ss_pred CCEEEEEECCcEEE
Confidence 34444444444444
No 28
>2q18_X 2-keto-3-deoxy-D-arabinonate dehydratase; FAH-family fold, lyase; 2.10A {Sulfolobus solfataricus} PDB: 2q19_X 2q1a_X 2q1c_X 2q1d_X 3bqb_A
Probab=27.22 E-value=34 Score=31.00 Aligned_cols=25 Identities=12% Similarity=-0.051 Sum_probs=22.4
Q ss_pred CCCCccCCCCcEEEEEecCccceee
Q 022156 237 ISGPEPESLGCLLELTWNGQKPLSL 261 (302)
Q Consensus 237 p~Gv~~~~~Gd~le~~~~g~g~l~~ 261 (302)
|.++.++++||.++++++|+|+++.
T Consensus 260 p~~~~~l~~GD~v~~~i~glG~l~n 284 (293)
T 2q18_X 260 PGRDKGLKDEDIVEITISNIGTLIT 284 (293)
T ss_dssp CCTTCCCCTTCEEEEEETTTEEEEE
T ss_pred CCCCcccCCCCEEEEEEcCcEEEEE
Confidence 5678899999999999999999874
No 29
>2k9x_A Tburm1, uncharacterized protein; unknown function; NMR {Trypanosoma brucei}
Probab=27.02 E-value=34 Score=26.61 Aligned_cols=62 Identities=24% Similarity=0.150 Sum_probs=32.9
Q ss_pred cCHHHHHHHHHHcCcccCCCCEEecCCCCCCccCCCCcEEEEEecCccceeeCCCCCCCCCCCCEEEEE
Q 022156 210 WTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFT 278 (302)
Q Consensus 210 ~~~~~lia~l~s~~~~L~~GDvI~TGTp~Gv~~~~~Gd~le~~~~g~g~l~~~~~~~~~L~~GD~V~~~ 278 (302)
+++.++|.|+..++..+ ..++...+.+ ..+++| +-+-++|. ..+.-+.-..-|++||+|.+-
T Consensus 35 ~TV~dLl~~L~~~~~~~-r~~lf~~~g~---~~lrpg--IlVLVNg~-d~e~l~gldt~L~dgD~V~fi 96 (110)
T 2k9x_A 35 TNLNGLVQLLKTNYVKE-RPDLLVDQTG---QTLRPG--ILVLVNSC-DAEVVGGMDYVLNDGDTVEFI 96 (110)
T ss_dssp CCHHHHHHHHTTTTCCS-CHHHHBCSSS---SSBCTT--EEEEESSS-BHHHHTSSCCCCCSSCEEEEE
T ss_pred ccHHHHHHHHHHHcccc-chhhEecCCC---cccCCC--eEEEECCe-eeeccCCcccCCCCcCEEEEe
Confidence 68999999995444445 3344322211 125556 33344441 111112234559999998873
No 30
>3r6o_A 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase; ssgcid, struc genomics, seattle structural genomics center for infectious isomerase; 1.95A {Mycobacterium abscessus}
Probab=26.37 E-value=35 Score=31.74 Aligned_cols=21 Identities=14% Similarity=0.013 Sum_probs=18.9
Q ss_pred ccCCCCcEEEEEecCccceee
Q 022156 241 EPESLGCLLELTWNGQKPLSL 261 (302)
Q Consensus 241 ~~~~~Gd~le~~~~g~g~l~~ 261 (302)
.++++||.++++++|+|+++.
T Consensus 296 ~~l~~GD~V~~ei~glG~l~n 316 (329)
T 3r6o_A 296 RYLRPGDVIEAHSAKLGKMRL 316 (329)
T ss_dssp CCCCTTCEEEEEETTTEEEEE
T ss_pred ccCCCCCEEEEEEcCceEEEE
Confidence 478999999999999999874
No 31
>2wqt_A 2-keto-4-pentenoate hydratase; lyase, dodecahedral form, aromatic hydrocarbons catabolism; 2.80A {Escherichia coli} PDB: 1sv6_A
Probab=25.51 E-value=37 Score=30.32 Aligned_cols=17 Identities=18% Similarity=0.176 Sum_probs=14.3
Q ss_pred CCcEEEEEecCccceee
Q 022156 245 LGCLLELTWNGQKPLSL 261 (302)
Q Consensus 245 ~Gd~le~~~~g~g~l~~ 261 (302)
+||.++++++|+|++++
T Consensus 242 ~GD~v~~~i~glG~l~~ 258 (270)
T 2wqt_A 242 AGDRFEAHIEGIGSVAA 258 (270)
T ss_dssp TTCEEEEEETTTEEEEE
T ss_pred CCCEEEEEEcCCceEEE
Confidence 57788999999999875
No 32
>3esi_A Uncharacterized protein; protein from erwinia carotovora subsp. atroseptica (pectobacterium atrosepticum), structural genomics; 2.50A {Pectobacterium atrosepticum}
Probab=25.37 E-value=68 Score=25.59 Aligned_cols=26 Identities=8% Similarity=0.169 Sum_probs=20.4
Q ss_pred CCCCCCCCEEEEEEEecCCCceeeee
Q 022156 266 RKFLEDGDEVTFTGFCKGNGYTVGFG 291 (302)
Q Consensus 266 ~~~L~~GD~V~~~~~~~~~~~~~~~G 291 (302)
...+.|||++++++...+....++|-
T Consensus 75 ~~~V~PGD~l~l~v~~~~~~~~l~F~ 100 (129)
T 3esi_A 75 QQPILPGKTLRLVLIWHAGKQSLTFS 100 (129)
T ss_dssp CSCCCTTCEEEEEEEEETTTTEEEEE
T ss_pred CcccCCCCEEEEEEEEEecCCcEEEE
Confidence 56678999999998887776666665
No 33
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=24.76 E-value=48 Score=24.36 Aligned_cols=19 Identities=26% Similarity=0.259 Sum_probs=15.1
Q ss_pred CCCCCCCCEEEEEEEecCC
Q 022156 266 RKFLEDGDEVTFTGFCKGN 284 (302)
Q Consensus 266 ~~~L~~GD~V~~~~~~~~~ 284 (302)
..-|++||.|++++...++
T Consensus 45 l~~lk~Gd~V~F~~~~~~~ 63 (82)
T 2l55_A 45 PQGLKAGDRVAFSFRLDPH 63 (82)
T ss_dssp CSSCSTTCEEEEEEEEETT
T ss_pred hhcCCCCCEEEEEEEECCC
Confidence 5669999999999765554
No 34
>2dfu_A Probable 2-hydroxyhepta-2,4-diene-1,7-dioate ISOM; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, structural GE NPPSFA; 2.20A {Thermus thermophilus}
Probab=23.76 E-value=42 Score=30.01 Aligned_cols=17 Identities=29% Similarity=0.221 Sum_probs=13.3
Q ss_pred CCcEEEEEecCccceee
Q 022156 245 LGCLLELTWNGQKPLSL 261 (302)
Q Consensus 245 ~Gd~le~~~~g~g~l~~ 261 (302)
+||.++++++|+|+++.
T Consensus 238 ~GD~v~~~i~glG~l~~ 254 (264)
T 2dfu_A 238 PGDRLEVAVEGVGTLFT 254 (264)
T ss_dssp TTCEEEEEETTTEEEEE
T ss_pred CCCEEEEEEeCcEEEEE
Confidence 36778888999988864
No 35
>2khj_A 30S ribosomal protein S1; OB fold, acetylation, phosphoprotein, ribonucleoprotein, RNA-binding; NMR {Escherichia coli}
Probab=23.35 E-value=50 Score=25.03 Aligned_cols=54 Identities=24% Similarity=0.213 Sum_probs=34.0
Q ss_pred cccCCCCEEecCCCCCCccCCCCcEEEEE--ecCccceee-C----CCCCCCCCCCCEEEEEEE
Q 022156 224 CNLRSGDLLGTGTISGPEPESLGCLLELT--WNGQKPLSL-D----GFTRKFLEDGDEVTFTGF 280 (302)
Q Consensus 224 ~~L~~GDvI~TGTp~Gv~~~~~Gd~le~~--~~g~g~l~~-~----~~~~~~L~~GD~V~~~~~ 280 (302)
..++.||+ ++|+...+.+ -|..+++. ++|+-..+- . ..+...++.||+|.+.+.
T Consensus 27 ~~~~~G~i-v~G~V~~v~~--~G~fV~l~~~~~Gll~~sel~~~~~~~~~~~~~vGd~V~v~V~ 87 (109)
T 2khj_A 27 ALNKKGAI-VTGKVTAVDA--KGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 87 (109)
T ss_dssp TTCCSSSE-EEEEEEEECS--SCEEEECSTTCBCCBCTTCCCSSSSSSGGGSCCTTCEEEEEEE
T ss_pred hcCCCCCE-EEEEEEEEEC--CeEEEEECCCCEEEEEHHHcCcccccChhhccCCCCEEEEEEE
Confidence 47899997 6788877654 35555542 344333321 1 134557999999998865
No 36
>2oyn_A Hypothetical protein MJ0056; structural genomics, unknown function, PSI-2, protein structure initiative; HET: CDP; 1.85A {Methanocaldococcus jannaschii DSM2661} SCOP: b.43.5.2 PDB: 2p3m_A 2vbs_A 2vbt_A* 2vbu_A* 2vbv_A*
Probab=23.28 E-value=44 Score=27.56 Aligned_cols=18 Identities=22% Similarity=0.143 Sum_probs=14.9
Q ss_pred CCCCCCCEEEEEEEecCC
Q 022156 267 KFLEDGDEVTFTGFCKGN 284 (302)
Q Consensus 267 ~~L~~GD~V~~~~~~~~~ 284 (302)
--|++||+|++++.+.++
T Consensus 120 L~LkDGD~V~I~v~~~~~ 137 (146)
T 2oyn_A 120 FNLKDGDVIKILIKGDKD 137 (146)
T ss_dssp HTCCTTCEEEEEEECCTT
T ss_pred cCCCCCCEEEEEEeCCCC
Confidence 459999999999886654
No 37
>2k4k_A GSP13, general stress protein 13; cytoplasm, stress response, RNA binding protein; NMR {Bacillus subtilis}
Probab=21.19 E-value=38 Score=26.80 Aligned_cols=53 Identities=25% Similarity=0.362 Sum_probs=32.0
Q ss_pred ccCCCCEEecCCCCCCccCCCCcEEEEE--ecCccceee-C----CCCCCCCCCCCEEEEEEE
Q 022156 225 NLRSGDLLGTGTISGPEPESLGCLLELT--WNGQKPLSL-D----GFTRKFLEDGDEVTFTGF 280 (302)
Q Consensus 225 ~L~~GDvI~TGTp~Gv~~~~~Gd~le~~--~~g~g~l~~-~----~~~~~~L~~GD~V~~~~~ 280 (302)
.++.|++ +.|+..++.+ -|..|++. ++|+-.++- . ......++.||.|.+.+.
T Consensus 4 ~~~vG~i-v~G~V~~i~~--~G~FV~l~~~~~Glihisel~~~~~~~~~~~~~vGd~V~vkV~ 63 (130)
T 2k4k_A 4 KFEVGSV-YTGKVTGLQA--YGAFVALDEETQGLVHISEVTHGFVKDINEHLSVGDEVQVKVL 63 (130)
T ss_dssp CCCTTCE-EEEEEEEEET--TEEEEEEETTEEEEEEGGGTSSSCCSCGGGTCCTTCEEEEEEE
T ss_pred cCCCCCE-EEEEEEEEeC--CeEEEEECCCcEEEEEHHHCCcccccCccccCCCCCEEEEEEE
Confidence 5778885 4788777644 35555552 233322221 1 124578999999999865
No 38
>3mml_B Allophanate hydrolase subunit 1; structural genomics, PSI-2, protein structure initiative, tuberculosis structural genomics consortium; 2.50A {Mycobacterium smegmatis}
Probab=20.51 E-value=57 Score=28.74 Aligned_cols=17 Identities=24% Similarity=0.202 Sum_probs=14.3
Q ss_pred CCCCCCCCCCCCEEEEE
Q 022156 262 DGFTRKFLEDGDEVTFT 278 (302)
Q Consensus 262 ~~~~~~~L~~GD~V~~~ 278 (302)
.++++..|++||+|+..
T Consensus 209 ~~~~P~Ll~pGD~VrF~ 225 (228)
T 3mml_B 209 NRDKPALLTPGMWVQFR 225 (228)
T ss_dssp TSSSSBSCCTTCEEEEE
T ss_pred CCCCCcccCCCCEEEEE
Confidence 46678889999999975
No 39
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=20.19 E-value=57 Score=23.49 Aligned_cols=14 Identities=29% Similarity=0.463 Sum_probs=10.8
Q ss_pred CCCCCCCEEEEEEE
Q 022156 267 KFLEDGDEVTFTGF 280 (302)
Q Consensus 267 ~~L~~GD~V~~~~~ 280 (302)
..+++|+.|++++.
T Consensus 71 ~~~~~g~~v~l~v~ 84 (93)
T 2dls_A 71 KLIKSGAYVALTLL 84 (93)
T ss_dssp HHHTSSSEEEEEEE
T ss_pred HhhcCCCEEEEEEE
Confidence 34578999999865
No 40
>2phc_B Uncharacterized protein PH0987; structural genomics, southeas collaboratory for structural genomics, secsg, PSI, protein initiative; 2.29A {Pyrococcus horikoshii} SCOP: b.62.1.4 d.74.5.1
Probab=20.07 E-value=60 Score=28.43 Aligned_cols=17 Identities=24% Similarity=0.331 Sum_probs=14.9
Q ss_pred CCCCCCCCCCCCEEEEE
Q 022156 262 DGFTRKFLEDGDEVTFT 278 (302)
Q Consensus 262 ~~~~~~~L~~GD~V~~~ 278 (302)
.+.++..|++||+|+..
T Consensus 193 ~~~~P~Ll~~GD~VrF~ 209 (225)
T 2phc_B 193 GKVPPSIVLPGDYVKFV 209 (225)
T ss_dssp TSSSSBSSCTTCEEEEE
T ss_pred CCCCCcccCCCCEEEEE
Confidence 46789999999999986
Done!