Query 022157
Match_columns 302
No_of_seqs 185 out of 1679
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 14:51:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022157.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022157hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a9d_A Sulfite oxidase; molybd 100.0 7.3E-83 2.5E-87 614.3 27.3 286 1-299 73-372 (372)
2 1ogp_A Sulfite oxidase; oxidor 100.0 7.6E-82 2.6E-86 611.0 25.8 300 1-301 81-392 (393)
3 1sox_A Sulfite oxidase; oxidor 100.0 2.5E-80 8.6E-85 612.0 30.4 286 1-299 167-466 (466)
4 2blf_A SORA, sulfite\:cytochro 100.0 1E-78 3.4E-83 585.7 26.6 275 1-298 86-373 (373)
5 2bii_A Nitrate reductase [NADP 100.0 6.1E-78 2.1E-82 587.4 26.0 285 1-297 61-379 (424)
6 2bih_A Nitrate reductase [NADP 100.0 5.3E-77 1.8E-81 586.4 27.2 285 1-297 111-429 (474)
7 2xts_A Sulfite dehydrogenase; 100.0 1.7E-70 5.9E-75 530.3 21.8 260 1-297 103-380 (390)
8 1xdy_A Bacterial sulfite oxida 100.0 4.5E-43 1.5E-47 327.5 1.1 198 1-222 84-292 (298)
9 3pe9_A Fibronectin(III)-like m 99.2 2.2E-11 7.5E-16 96.1 8.5 76 178-275 3-80 (98)
10 3pdd_A Glycoside hydrolase, fa 98.2 2.6E-06 9E-11 74.2 7.1 74 178-274 3-79 (190)
11 3pdd_A Glycoside hydrolase, fa 97.7 0.00018 6E-09 62.5 9.6 78 174-273 91-170 (190)
12 1ms9_A Trans-sialidase; trans- 69.3 22 0.00075 36.1 9.9 54 175-228 186-239 (648)
13 4fj6_A Glycoside hydrolase fam 64.1 8.4 0.00029 38.0 5.6 50 176-225 321-370 (523)
14 4fj6_A Glycoside hydrolase fam 62.2 14 0.00048 36.4 6.8 16 209-224 401-416 (523)
15 1w0p_A Sialidase; hydrolase, n 57.4 12 0.00042 38.8 5.6 51 175-226 541-600 (781)
16 3tp4_A Computational design of 53.6 47 0.0016 32.4 8.7 77 175-271 373-458 (475)
17 2oxg_Z SOXZ protein; immunoglo 52.6 31 0.0011 26.7 6.0 55 205-273 46-100 (108)
18 3a72_A EXO-arabinanase; arabin 52.4 23 0.00079 32.9 6.2 37 189-225 96-133 (355)
19 1v8h_A Sulfur oxidation protei 52.2 34 0.0012 26.4 6.2 55 205-273 45-99 (107)
20 1so7_A Sialidase 2; neuraminid 52.0 25 0.00086 32.2 6.4 50 176-225 157-213 (382)
21 4eib_A Glucoamylase; beta barr 51.7 13 0.00043 29.3 3.5 59 189-263 41-105 (109)
22 3a72_A EXO-arabinanase; arabin 43.6 25 0.00086 32.6 4.9 20 205-224 49-68 (355)
23 2ydt_A EXO-1,5-alpha-L-arabino 43.2 36 0.0012 31.7 6.0 38 188-225 100-138 (367)
24 2ydt_A EXO-1,5-alpha-L-arabino 41.3 29 0.00098 32.4 4.9 21 204-224 53-73 (367)
25 3sil_A Sialidase; glycosidase, 37.3 45 0.0015 31.3 5.6 50 175-225 168-220 (379)
26 2ddu_A Reelin; beta-jelly-roll 33.7 43 0.0015 31.9 4.8 66 208-273 101-181 (387)
27 2yuw_A Myosin binding protein 32.7 53 0.0018 23.7 4.3 20 255-274 75-94 (110)
28 2kbg_A N-CAM 2, neural cell ad 30.8 47 0.0016 25.4 3.8 21 255-275 74-94 (114)
29 3f6k_A Sortilin; protein sorti 30.8 44 0.0015 34.1 4.6 23 205-227 465-487 (685)
30 2sli_A Intramolecular trans-si 28.8 77 0.0026 32.1 6.0 47 177-226 456-506 (679)
31 2cdp_A Beta-agarase 1; carbohy 28.7 1.6E+02 0.0055 23.8 7.0 63 190-267 78-146 (160)
32 1w8o_A Bacterial sialidase; 3D 28.7 69 0.0024 31.1 5.6 20 206-225 188-207 (601)
33 1x5y_A Myosin binding protein 28.6 77 0.0026 22.9 4.7 21 255-275 76-96 (111)
34 2w20_A Sialidase A; secreted, 27.8 37 0.0013 32.6 3.3 46 181-226 249-302 (471)
35 1pmh_X Cscbm27-1, beta-1,4-man 26.8 48 0.0016 28.3 3.5 24 204-227 44-67 (185)
36 2bf6_A Sialidase, EXO-alpha-si 26.8 66 0.0023 30.4 4.9 45 181-225 222-270 (449)
37 2xbg_A YCF48-like protein; pho 26.3 2.4E+02 0.0082 24.7 8.4 16 210-225 144-159 (327)
38 1n10_A PHL P I, pollen allerge 26.1 95 0.0033 27.3 5.5 54 199-271 166-221 (241)
39 1ms9_A Trans-sialidase; trans- 25.9 1.6E+02 0.0053 29.9 7.6 18 208-225 265-282 (648)
40 2uur_A Collagen alpha-1(IX) ch 23.4 88 0.003 27.4 4.7 41 256-300 126-167 (245)
41 2c9r_A COPC, copper resistance 23.4 1.8E+02 0.0063 21.8 6.0 73 180-271 7-92 (102)
42 1bpv_A Titin, A71, connectin; 23.3 86 0.0029 23.4 4.1 20 255-274 78-98 (112)
No 1
>2a9d_A Sulfite oxidase; molybdopterin, molybdenum, oxidoreductase; HET: MTE; 1.70A {Gallus gallus} SCOP: b.1.18.6 d.176.1.1 PDB: 2a9a_A* 2a99_A* 2a9b_A* 2a9c_A*
Probab=100.00 E-value=7.3e-83 Score=614.28 Aligned_cols=286 Identities=44% Similarity=0.803 Sum_probs=253.8
Q ss_pred ChhhhhhCCCeEEEEEEEecCC--CCcCc---c-------ceecceeEEceeHHHHHHHcCCCCCCCcccCCceEEEEEE
Q 022157 1 MCHLYLNNPKEYINLLLFCAVR--TNLSF---L-------YHFLSAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVS 68 (302)
Q Consensus 1 ~~~L~~~~p~~~~~~~l~C~gr--~~~~~---~-------~ai~~a~w~GV~L~dlL~~ag~~~~~~~~~~~a~~v~~~~ 68 (302)
|+||+++||+++++++|+|+|+ .+|.. + .+|++++|+||+|+|||++||++.+ ..++++|.|+|
T Consensus 73 l~dL~~~lp~~~~~~~l~C~gN~r~~~~~~~~v~G~~w~~gav~~~~W~GV~L~dlL~~ag~~~~----~~~a~~V~~~~ 148 (372)
T 2a9d_A 73 LAELRSRFPKHEVTATLQCAGNRRSEMSRVRPVKGLPWDIGAISTARWGGARLRDVLLHAGFPEE----LQGEWHVCFEG 148 (372)
T ss_dssp HHHHHHHSCCEEEEEEEECTTTTHHHHHTTSCCSSCCCCTTSEEEEEEEEEEHHHHHHHTTCCSC----CSSCCEEEEEE
T ss_pred HHHHHhhCCCeEEEEEEEecCCchhhccccccccccccccCceecceEEeEEHHHHHHhcCCCcC----CCCcEEEEEEe
Confidence 5789658999999999999992 22211 1 1788999999999999999999732 12689999999
Q ss_pred eccccccCCCCeEEEEEchhhcCCCCCEEEEEecCCccCCCCCCCceEEEecCcccccceeeeeeeEEeccccCCceeee
Q 022157 69 IDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQK 148 (302)
Q Consensus 69 ~D~~~~~~~~~Y~~sipl~~~~~~~~~vlLAy~mNGepLp~~hG~PlRLvvPg~~G~~~vKwl~~Ie~~~~~~~g~w~~~ 148 (302)
+|..+ ++.+|.++|||++||++++++||||+|||||||++|||||||||||+||+||||||++|+|+++++++|||++
T Consensus 149 ~D~~~--~~~~Y~~sipl~~a~dp~~d~lLA~~mNGepL~~~hG~PlRlVvPg~~G~ksvKwl~~I~v~~~~~~~~w~~~ 226 (372)
T 2a9d_A 149 LDADP--GGAPYGASIPYGRALSPAADVLLAYEMNGTELPRDHGFPVRVVVPGVVGARSVKWLRRVAVSPDESPSHWQQN 226 (372)
T ss_dssp EEECT--TCCEEEEEEEHHHHHCGGGCCEEEEEETTEECCGGGTTTCEEECTTBCGGGSCSSEEEEEEESSCCCCHHHHS
T ss_pred cCCCC--CCCCeEEEeEHHHHhCCCCCEEEEECCCCeECCcccCceEEEEecchhheeecceeeEEEEeccCCCCcceec
Confidence 98422 2337999999999998645899999999999999999999999999999999999999999999999999999
Q ss_pred cCccCCCCCCCCCCCcCCCCCccceeceEEEEeecCCCeecCCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeEccCc
Q 022157 149 DYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQK 228 (302)
Q Consensus 149 ~Y~~~~~~~~~~~~~~~~~~~i~~~~v~S~I~~P~~~~~v~~G~v~i~G~A~sggg~~I~rVEVS~DgG~tW~~A~L~~~ 228 (302)
+|+.++|..++++.+|...++|++|++||+|+.|.++++|+.|.++|+||||||||++|+|||||+|||+||++|+|..+
T Consensus 227 ~Y~~~~p~~~~~~~~~~~~~~i~~~~v~S~I~~P~~~~~v~~g~~~v~G~A~sGgg~~I~rVEVS~DgG~tW~~A~l~~~ 306 (372)
T 2a9d_A 227 DYKGFSPCVDWDTVDYRTAPAIQELPVQSAVTQPRPGAAVPPGELTVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGD 306 (372)
T ss_dssp SSCCCCTTCCTTTCCGGGSCCCCBCCCEEEEEESCTTCEECSEEEEEEEEEECSTTCCEEEEEEESBSSSSCEECEECSC
T ss_pred ceeEcCCCCCccccccccCcccccccccEEEecCCCCCEeccceEEEEEEEEcCCCCCEEEEEEEcCCCCcceEeEcCCc
Confidence 99999998877777787888999999999999999999999999999999999888999999999999999999999866
Q ss_pred CCCcccccCCCCCceeeEEeEEEEEC-CC-ccEEEEEEEeCCCCCCCCCcccccccccCCCCceEEEEEEEee
Q 022157 229 TGIPYIADHMSSDKWAWVFFEVIIDI-PH-STQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVGH 299 (302)
Q Consensus 229 ~~~~~~~~~~~~~~~~W~~W~~~~~~-~g-~~~i~~RA~D~~Gn~QP~~~~~~wN~~G~~~n~~h~v~v~v~~ 299 (302)
+. ...++|||++|+++|++ +| .++|+|||||++||+||+....+||++||+||+||+|+|+|.+
T Consensus 307 ~~-------~~~~~~~W~~W~~~~~~~~g~~~~i~~RA~D~~g~~QP~~~~~~wn~~G~~~n~~~~v~v~v~~ 372 (372)
T 2a9d_A 307 KA-------PPGRAWAWALWELTVPVEAGTELEIVCKAVDSSYNVQPDSVAPIWNLRGVLSTAWHRVRVSVQD 372 (372)
T ss_dssp CC-------CTTCCCSCEEEEEEEEECTTCEEEEEEEEEETTCCBCCSCSGGGCCTTCCCCCSCEEEEEEECC
T ss_pred cc-------ccCCccEEEEEEEeEEcCCCCEEEEEEEEEcCCCCcCCCCccCCcCCCCcccceEEEEEEEEeC
Confidence 42 12358999999999988 55 7999999999999999998767899999999999999999974
No 2
>1ogp_A Sulfite oxidase; oxidoreductase, molybdenum cofactor, molybdopterin, peroxisomes, intramolecular electron transfer, oxidoreductas; HET: MTQ; 2.60A {Arabidopsis thaliana} SCOP: b.1.18.6 d.176.1.1
Probab=100.00 E-value=7.6e-82 Score=611.02 Aligned_cols=300 Identities=73% Similarity=1.216 Sum_probs=253.9
Q ss_pred ChhhhhhCCCeEEEEEEEecCC--CCcC---cc-------ceecceeEEceeHHHHHHHcCCCCCCCcccCCceEEEEEE
Q 022157 1 MCHLYLNNPKEYINLLLFCAVR--TNLS---FL-------YHFLSAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVS 68 (302)
Q Consensus 1 ~~~L~~~~p~~~~~~~l~C~gr--~~~~---~~-------~ai~~a~w~GV~L~dlL~~ag~~~~~~~~~~~a~~v~~~~ 68 (302)
|+|| ++||+++++++|+|+|+ ..|+ ++ .+|++++|+||+|+|||++||++.++.....+.++|.|+|
T Consensus 81 l~dL-~~lp~~~~~~~l~C~gN~r~~~~~~~~~~G~~W~~gai~~a~W~GV~L~dlL~~aG~~~~a~~~~~~~~~V~f~g 159 (393)
T 1ogp_A 81 IKDI-RSLPKYNVTATLQCAGNRRTAMSKVRNVRGVGWDVSAIGNAVWGGAKLADVLELVGIPKLTASTNLGARHVEFVS 159 (393)
T ss_dssp HHHH-HTSCEEEEEEEEECTTTTHHHHHHHSCCCSCCCCSCCEEEEEEEEEEHHHHHHTTTCCTTCSCCTTCCCEEEEEE
T ss_pred HHHH-hcCCCEEEEEEEEecCCccccccccccccCccccccceecceEEeeEHHHHHHhcCCCcccccccCcceEEEEEE
Confidence 5789 68999999999999982 2221 11 1789999999999999999999864211112337999999
Q ss_pred eccccccCCCCeEEEEEchhhcCCCCCEEEEEecCCccCCCCCCCceEEEecCcccccceeeeeeeEEeccccCCceeee
Q 022157 69 IDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQK 148 (302)
Q Consensus 69 ~D~~~~~~~~~Y~~sipl~~~~~~~~~vlLAy~mNGepLp~~hG~PlRLvvPg~~G~~~vKwl~~Ie~~~~~~~g~w~~~ 148 (302)
+|.....++.+|.++|||++||++++++||||+|||||||++|||||||||||+||++|||||++|+|+++++++|||++
T Consensus 160 ~D~~~~~~~~~Y~~sipl~~al~~~~~vlLA~~mNGepL~~~hG~PlRLVvPg~~G~rsvKwL~~I~v~~~~~~~~w~~~ 239 (393)
T 1ogp_A 160 VDRCKEENGGPYKASITLSQATNPEADVLLAYEMNGETLNRDHGFPLRVVVPGVIGARSVKWLDSINVIAEESQGFFMQK 239 (393)
T ss_dssp SCCCGGGTTCCCEEEEEHHHHHCGGGCCEEEEEETTEECCTTTTTTCEEECTTSCGGGSCCSEEEEEEESSCCCCHHHHS
T ss_pred cCcccccCCCCeEEEeEHHHHhCCCCCEEEEeCcCCeECCcccCceEEEEeCccccceeeeeccEEEEEecCCCCcceec
Confidence 99544444458999999999998644799999999999999999999999999999999999999999999999999999
Q ss_pred cCccCCCCCCCCCCCcCCCCCccceeceEEEEeecCCCeecCCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeEccCc
Q 022157 149 DYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQK 228 (302)
Q Consensus 149 ~Y~~~~~~~~~~~~~~~~~~~i~~~~v~S~I~~P~~~~~v~~G~v~i~G~A~sggg~~I~rVEVS~DgG~tW~~A~L~~~ 228 (302)
+|+++|+.++++...+....+|++|++||+|+.|.++++|+.|.++|+||||||||++|+|||||+|||+||++|+|..+
T Consensus 240 ~Y~~~p~~~~~~~~~~~~~~~i~~~~v~S~I~~P~~~~~v~~g~~~v~G~A~sGgg~~I~rVEVS~DgG~tW~~A~l~~~ 319 (393)
T 1ogp_A 240 DYKMFPPSVNWDNINWSSRRPQMDFPVQSAICSVEDVQMVKPGKVSIKGYAVSGGGRGIERVDISLDGGKNWVEASRTQE 319 (393)
T ss_dssp SSCCCCTTCCTTTCCGGGSCCCCSCCCEEEECSSCSEEEECSEEEEEEEEEECSTTCCEEEEEEESSTTSSCEECEEESS
T ss_pred cccccCCCCCcccccCCCCceeeeecccEEEeCCCCCCEecCCcEEEEEEEEcCCCCCEEEEEEEcCCCCCceEeeccCc
Confidence 99999888877766666677899999999999999999999999999999999988999999999999999999999874
Q ss_pred CCCcccccCCCCCceeeEEeEEEEECCCccEEEEEEEeCCCCCCCCCcccccccccCCCCceEEEEEEEeecC
Q 022157 229 TGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVGHSN 301 (302)
Q Consensus 229 ~~~~~~~~~~~~~~~~W~~W~~~~~~~g~~~i~~RA~D~~Gn~QP~~~~~~wN~~G~~~n~~h~v~v~v~~~~ 301 (302)
+..++........+|||++|+++|++.++++|+|||+|++||+||+....+||++||+||+||+|+|+|.+|+
T Consensus 320 ~~~~~~~~~~~~~~~aW~~W~~~~~~~~~~~i~vRA~D~~gn~QP~~~~~~wN~~G~~~N~~~~v~v~~~~~~ 392 (393)
T 1ogp_A 320 PGKQYISEHSSSDKWAWVLFEATIDVSQTTEVIAKAVDSAANVQPENVESVWNLRGVLNTSWHRVLLRLGHSN 392 (393)
T ss_dssp SSSCCCSSSTTSCTTSCEEEEEEEEESSCEEEEEEEEETTCCBCCSCHHHHCCTTCCCCCCCEEEEEEEC---
T ss_pred CccccccccccCCCCEEEEEEEEEecCCCeEEEEEEEcCCCCcCCCCccCcccCCCcccCCEEEEEEECCCCC
Confidence 3111111122235899999999999844899999999999999999855569999999999999999988775
No 3
>1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A*
Probab=100.00 E-value=2.5e-80 Score=612.02 Aligned_cols=286 Identities=44% Similarity=0.803 Sum_probs=254.1
Q ss_pred ChhhhhhCCCeEEEEEEEecCC--CCcCc---c-------ceecceeEEceeHHHHHHHcCCCCCCCcccCCceEEEEEE
Q 022157 1 MCHLYLNNPKEYINLLLFCAVR--TNLSF---L-------YHFLSAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVS 68 (302)
Q Consensus 1 ~~~L~~~~p~~~~~~~l~C~gr--~~~~~---~-------~ai~~a~w~GV~L~dlL~~ag~~~~~~~~~~~a~~v~~~~ 68 (302)
|+||+++||+++++++|+|+|+ .+|.. + .+|++++|+||+|+|||++||++.+ .+++++|.|+|
T Consensus 167 l~dL~~~lp~~~~~~~l~C~gN~r~~~~~~~~v~G~~W~~gai~~~~W~Gv~L~dlL~~ag~~~~----~~~a~~V~~~~ 242 (466)
T 1sox_A 167 LAELRSRFPKHEVTATLQCAGNRRSEMSRVRPVKGLPWDIGAISTARWGGARLRDVLLHAGFPEE----LQGEWHVCFEG 242 (466)
T ss_dssp HHHHHHHSCEEEEEEEEECTTTTHHHHHTTSCCSSCCCCTTSEEEEEEEEEEHHHHHHHTTCCSC----CSSCCEEEEEE
T ss_pred HHHHHhhCCCeEEEEEEEecCCCcccccccccccccccccCceecceEEEEEHHHHHHHcCCCCC----CCCcEEEEEEe
Confidence 5789658999999999999982 22211 1 1688999999999999999999732 12689999999
Q ss_pred eccccccCCCCeEEEEEchhhcCCCCCEEEEEecCCccCCCCCCCceEEEecCcccccceeeeeeeEEeccccCCceeee
Q 022157 69 IDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQK 148 (302)
Q Consensus 69 ~D~~~~~~~~~Y~~sipl~~~~~~~~~vlLAy~mNGepLp~~hG~PlRLvvPg~~G~~~vKwl~~Ie~~~~~~~g~w~~~ 148 (302)
+|..+ ++.+|.++|||++||++++++||||+|||||||++|||||||||||+||+||||||++|+|+++++++|||++
T Consensus 243 ~D~~~--~~~~Y~~sipl~~a~~p~~~~lLA~~mNGepL~~~hG~PlRlvvPg~~G~~svKwl~~I~v~~~~~~~~w~~~ 320 (466)
T 1sox_A 243 LDADP--GGAPYGASIPYGRALSPAADVLLAYEMNGTELPRDHGFPVRVVVPGVVGARSVKWLRRVAVSPDESPSHWQQN 320 (466)
T ss_dssp EEECT--TCCEEEEEEEHHHHHCTTTCCEEEEEETTEECCGGGTTTCEEECTTBCGGGSCSSEEEEEEESSCCCSHHHHS
T ss_pred cCCCC--CCCCEEEEeEHHHHhCCCCCEEEEECcCCeECChhcCceEEEEecchhheeeeeeccEEEEEeCCCCCcceec
Confidence 98432 2347999999999998756899999999999999999999999999999999999999999999999999999
Q ss_pred cCccCCCCCCCCCCCcCCCCCccceeceEEEEeecCCCeecCCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeEccCc
Q 022157 149 DYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQK 228 (302)
Q Consensus 149 ~Y~~~~~~~~~~~~~~~~~~~i~~~~v~S~I~~P~~~~~v~~G~v~i~G~A~sggg~~I~rVEVS~DgG~tW~~A~L~~~ 228 (302)
+|+.++|..++++.+|...++|++|++||+|+.|.++++|+.|.++|+||||||||++|+|||||+|||+||++|+|..+
T Consensus 321 ~Y~~~~p~~~~~~~~~~~~~~i~~~~v~S~I~~P~~~~~v~~g~~~v~G~A~sggg~~I~rVEVS~DgG~tW~~A~l~~~ 400 (466)
T 1sox_A 321 DYKGFSPCVDWDTVDYRTAPAIQELPVQSAVTQPRPGAAVPPGELTVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGD 400 (466)
T ss_dssp SSCCCCTTCCTTTCCGGGSCCCCBCCCEEEEEESCTTCEECSEEEEEEEEEECSTTCCEEEEEEESBTTSSCEECEECSC
T ss_pred CceecCCCCCccccccccccccccccccEEEecCCCCCEeccceEEEEEEEEcCCCCCEEEEEEEcCCCCcceEeecCCc
Confidence 99999998877777787888999999999999999999999999999999999888999999999999999999999866
Q ss_pred CCCcccccCCCCCceeeEEeEEEEEC-CC-ccEEEEEEEeCCCCCCCCCcccccccccCCCCceEEEEEEEee
Q 022157 229 TGIPYIADHMSSDKWAWVFFEVIIDI-PH-STQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVGH 299 (302)
Q Consensus 229 ~~~~~~~~~~~~~~~~W~~W~~~~~~-~g-~~~i~~RA~D~~Gn~QP~~~~~~wN~~G~~~n~~h~v~v~v~~ 299 (302)
+. ...++|||++|+++|++ +| .++|+|||||++||+||+....+||++||+||+||+|+|+|.+
T Consensus 401 ~~-------~~~~~~~W~~W~~~~~~~~g~~~~i~~RA~D~~g~~QP~~~~~~wn~~G~~~n~~~~v~v~v~~ 466 (466)
T 1sox_A 401 KA-------PPGRAWAWALWELTVPVEAGTELEIVCKAVDSSYNVQPDSVAPIWNLRGVLSTAWHRVRVSVQD 466 (466)
T ss_dssp CC-------CTTCCCSCEEEEEEEEECTTCEEEEEEEEEETTCCBCCSCSGGGCCTTCCCCCSCEEEEEEECC
T ss_pred cc-------ccCCccEEEEEEEeEEcCCCCEEEEEEEEEcCCCCcCCCCccCCcCCCCcccceEEEEEEEEeC
Confidence 42 12358999999999987 55 7999999999999999998767899999999999999999974
No 4
>2blf_A SORA, sulfite\:cytochrome C oxidoreductase subunit A; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_A* 2c9x_A* 2ca3_A* 2ca4_A*
Probab=100.00 E-value=1e-78 Score=585.67 Aligned_cols=275 Identities=27% Similarity=0.478 Sum_probs=239.2
Q ss_pred ChhhhhhCCCeEEEEEEEecC--CCCcC-cc-------ceecceeEEceeHHHHHHHcCCCCCCCcccCCceEEEEEEec
Q 022157 1 MCHLYLNNPKEYINLLLFCAV--RTNLS-FL-------YHFLSAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSID 70 (302)
Q Consensus 1 ~~~L~~~~p~~~~~~~l~C~g--r~~~~-~~-------~ai~~a~w~GV~L~dlL~~ag~~~~~~~~~~~a~~v~~~~~D 70 (302)
|+||+++||+++++++|+|++ |.+|. ++ .+|++++|+||+|+|||++||+++ ++++|.|+|+|
T Consensus 86 l~dL~~~lp~~~~~~~l~C~~N~R~~~~~~~~G~~W~~gai~~~~W~GV~L~dlL~~ag~~~-------~a~~V~~~~~D 158 (373)
T 2blf_A 86 LQDLKNDFPASEVVAVNQCSGNSRGFVEPRVGGGQLANGAMGNARWRGVPLKAVLEKAGVQA-------GAKQVTFGGLD 158 (373)
T ss_dssp HHHHHHHSCCEEEEEEEECTTTTGGGCSSCCSSCCCCSCSEEEEEEEEEEHHHHHHHHCBCT-------TCCEEEEEESC
T ss_pred HHHHhccCCCeEEEEEEEeccCccccccccccCCCccccceeeeEEEEEEHHHHHHhcCCCC-------CCcEEEEEecC
Confidence 578965599999999999999 33432 11 168999999999999999999986 69999999999
Q ss_pred cccccCCCCeEEEEEchhhcCCCCCEEEEEecCCccCCCCCCCceEEEecCcccccceeeeeeeEEeccccCCceeeecC
Q 022157 71 KCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDY 150 (302)
Q Consensus 71 ~~~~~~~~~Y~~sipl~~~~~~~~~vlLAy~mNGepLp~~hG~PlRLvvPg~~G~~~vKwl~~Ie~~~~~~~g~w~~~~Y 150 (302)
.....+...|.++|||++||++ ++||||+|||||||++|||||||||||+||+||||||++|+|+++++++|||+++|
T Consensus 159 ~~~~~~~~~Y~~sipl~~a~~~--~~lLA~~mNGepL~~~hG~PlRlVvPg~~G~~svKwl~~I~v~~~~~~~~w~~~~Y 236 (373)
T 2blf_A 159 GPVIPETPDFVKALSIDHATDG--EVMLAYSMNGADLPWLNGYPLRLVVPGYYGTYWVKHLNEITVIDKEFDGFWMKTAY 236 (373)
T ss_dssp BCSSTTSCCCEEEEEHHHHTSS--CSEEEEEETTEECCGGGTTTCEEECTTBCGGGSCBSEEEEEEESSCCCCHHHHTSS
T ss_pred CCCCCCCCCEEEEEEHHHhcCC--CEEEEEeeCCeECCcccCCceEEEecCccccccceeccEEEEEecCCCCcceeccc
Confidence 4222222239999999999986 89999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCcC--CCCCccceeceEEEEeecCCCeecCCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeEccCc
Q 022157 151 KMFPPSVNWDNINWK--SRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQK 228 (302)
Q Consensus 151 ~~~~~~~~~~~~~~~--~~~~i~~~~v~S~I~~P~~~~~v~~G~v~i~G~A~sggg~~I~rVEVS~DgG~tW~~A~L~~~ 228 (302)
+++.........+|. +..+|++|++||+|+.|.++++|+.|.++|+||||+ |+++|+|||||+|||+||++|+|..+
T Consensus 237 ~~p~~~~~~~~~~~~~~~~~~i~~~~v~S~I~~P~~~~~v~~g~~~v~G~A~~-Gg~~I~rVEVS~DgG~tW~~A~l~~~ 315 (373)
T 2blf_A 237 RIPDNACACTEPGKAPTATIPINRFDVRSFITNVENGASVKAGEVPLRGIAFD-GGYGITQVSVSADAGKSWTNATLDPG 315 (373)
T ss_dssp EEESSTTCCCSTTCCCSSEEECCBCCCEEEECSCCTTEEECSEEEEEEEEEEC-SSSCEEEEEEESSTTSSCEECEECCC
T ss_pred ccCCccccccCCCCcccccccceecccCEEEEecCCCCEeccceEEEEEEEEc-CCCCEEEEEEEeCCCCCceEeEeCCC
Confidence 983221111122333 456799999999999999999999999999999996 57899999999999999999999866
Q ss_pred CCCcccccCCCCCceeeEEeEEEEEC-CCccEEEEEEEeCCCCCCCCCcccccccccCCCCceEEEEEEEe
Q 022157 229 TGIPYIADHMSSDKWAWVFFEVIIDI-PHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVG 298 (302)
Q Consensus 229 ~~~~~~~~~~~~~~~~W~~W~~~~~~-~g~~~i~~RA~D~~Gn~QP~~~~~~wN~~G~~~n~~h~v~v~v~ 298 (302)
.. +|||++|+++|+. +|+++|+|||+|++||+||+... ||++||+||+||+|+|+|.
T Consensus 316 ~~-----------~~~W~~W~~~~~~~~g~~~i~~RA~D~~g~~QP~~~~--wn~~G~~~N~~~~v~v~v~ 373 (373)
T 2blf_A 316 LG-----------KYSFRGWKAVLPLTKGDHVLMCRATNARGETQPMQAT--WNPAGYMRNVVEATRVIAA 373 (373)
T ss_dssp SC-----------TTSCEEEEEEEEECSEEEEEEEEEEETTSCCCCSSCC--CCTTCCCCCCCEEEEEEEC
T ss_pred CC-----------CCeEEEEEEEEEcCCCcEEEEEEEEcCCCCcCCCccc--ccccccccCcEEEEEEEEC
Confidence 54 8999999999987 68899999999999999998776 9999999999999999984
No 5
>2bii_A Nitrate reductase [NADPH]; FAD, flavoprotein, heme, molybdenum, nitrate assimilation, oxidoreductase; HET: MTV; 1.70A {Pichia angusta}
Probab=100.00 E-value=6.1e-78 Score=587.40 Aligned_cols=285 Identities=28% Similarity=0.526 Sum_probs=243.0
Q ss_pred ChhhhhhCCCeEEEEEEEecCC--CCcC---c-------cceecceeEEceeHHHHHHHcCCCCCCCcccCCceEEEEEE
Q 022157 1 MCHLYLNNPKEYINLLLFCAVR--TNLS---F-------LYHFLSAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVS 68 (302)
Q Consensus 1 ~~~L~~~~p~~~~~~~l~C~gr--~~~~---~-------~~ai~~a~w~GV~L~dlL~~ag~~~~~~~~~~~a~~v~~~~ 68 (302)
|+||+++||+++++++|+|+++ .+|+ + ..+|++++|+||+|+|||++||+++ ++++|.|+|
T Consensus 61 l~dL~~~lp~~~~~~~l~C~gN~r~~~~~~~~~~G~~W~~~ai~~a~WtGV~L~dlL~~ag~~~-------~a~~V~f~~ 133 (424)
T 2bii_A 61 LSDIMEQFDIYSTPVTMVCAGNRRKEQNMVKKGAGFNWGAAGTSTSLWTGCMLGDVIGKARPSK-------RARFVWMEG 133 (424)
T ss_dssp HHHHHHHSCCEEEEEEEECTTTTHHHHHHHSCCSSCCCCSCCEEEEEEEEEEHHHHHHHHCBCT-------TCCEEEEEE
T ss_pred HHHHhccCCCeEEEEEEEecCCccccccccccccccccccCceEeeEEEeeEHHHHHHhcCCCC-------CceEEEEEe
Confidence 5789656999999999999993 2221 0 0168899999999999999999986 699999999
Q ss_pred eccccccCCCCeEEEEEchhhcCCCCCEEEEEecCCccCCCCCCCceEEEecCcccccceeeeeeeEEeccccCCceeee
Q 022157 69 IDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQK 148 (302)
Q Consensus 69 ~D~~~~~~~~~Y~~sipl~~~~~~~~~vlLAy~mNGepLp~~hG~PlRLvvPg~~G~~~vKwl~~Ie~~~~~~~g~w~~~ 148 (302)
+|..+ .++|.++|||++||++++++||||+|||||||++|||||||||||+||+||||||++|+|+++++++|||.+
T Consensus 134 ~D~~~---~g~Y~~sipl~~a~d~~~dvlLA~~mNGepL~~~hG~PlRLVvPg~~G~rsvKwl~~I~v~~~~~~g~~~~~ 210 (424)
T 2bii_A 134 ADNPA---NGAYGTCIRLSWCMDPERCIMIAYQQNGEWLHPDHGKPLRVVIPGVIGGRSVKWLKKLVVSDRPSENWYHYF 210 (424)
T ss_dssp SCCCT---TSSCEEEEEHHHHTCTTTCCEEEEEETTEECCGGGTTTCEEECTTBCGGGSCSSEEEEEEESSCCCCHHHHS
T ss_pred cCCCC---CCCEEEEEEHHHHhCCCCCEEEEEeeCCcCCCcccCCceEEEecccccCCccccCcEEEEEeccCCCceeee
Confidence 98432 237999999999999755799999999999999999999999999999999999999999999999999999
Q ss_pred cCccCCCCCCCCC----CC-cCC-CCCccceeceEEEEeecCCCeec--CCcEEEEEEEEeCCCCCeEEEEEEcCCCCCc
Q 022157 149 DYKMFPPSVNWDN----IN-WKS-RRPLMDFPVQCVICSLEDVNVMK--PGKAKVSGYAVSGGGRGIERVDISVDGGKNW 220 (302)
Q Consensus 149 ~Y~~~~~~~~~~~----~~-~~~-~~~i~~~~v~S~I~~P~~~~~v~--~G~v~i~G~A~sggg~~I~rVEVS~DgG~tW 220 (302)
+|+++|+..+++. .+ |.+ ..+|++|+|||+|+.|.++++|+ .|.|+|+||||||||++|+|||||+|||+||
T Consensus 211 ~yrv~p~~~~~~~~~~~~~~w~~~~~~i~~l~v~S~I~~P~~~~~v~~~~g~~~v~GyA~sGGGr~I~rVEVS~DgG~tW 290 (424)
T 2bii_A 211 DNRVLPTMVTPEMAKSDDRWWKDERYAIYDLNLQTIICKPENQQVIKISEDEYEIAGFGYNGGGVRIGRIEVSLDKGKSW 290 (424)
T ss_dssp SSBCCCTTCCHHHHHHCGGGGSCGGGBCCBCCCEEEEEESCTTCEEECCSCEEEEEEEEECSTTCCEEEEEEESSTTSSC
T ss_pred cccccCCCCCccccccccCccccCcceecccccceEEecCCCCCEeecCCCeEEEEEEEEcCCCCCEEEEEEEcCCCCCc
Confidence 9999987765432 12 333 35799999999999999999996 4589999999999889999999999999999
Q ss_pred EEeEccCcCCCc--------ccc--cC-CCCCceeeEEeEEEEEC---CCccEEEEEEEeCCCCCCCCCcccccccccCC
Q 022157 221 VEASRYQKTGIP--------YIA--DH-MSSDKWAWVFFEVIIDI---PHSTQIVAKAVDTAANVQPESVETIWNLRGVL 286 (302)
Q Consensus 221 ~~A~L~~~~~~~--------~~~--~~-~~~~~~~W~~W~~~~~~---~g~~~i~~RA~D~~Gn~QP~~~~~~wN~~G~~ 286 (302)
+.|+|..++... +.+ +. -.+++|||++|+++|++ +|+++|+|||+|++||+||+.. +||++||+
T Consensus 291 ~~A~L~~pe~~~~~~~~~~~~g~~~~~~~~~~~~~W~~W~~~~~~~~~~g~~~I~vRA~D~~gn~QP~~~--~WN~~G~~ 368 (424)
T 2bii_A 291 KLADIDYPEDRYREAGYFRLFGGLVNVCDRMSCLCWCFWKLKVPLSELARSKDILIRGMDERMMVQPRTM--YWNVTSML 368 (424)
T ss_dssp EECEEECTHHHHHHTCSEEETTEEECGGGCCCCCSCEEEEEEEEHHHHHTCSEEEEEEEETTCCBCCSSC--CCCTTCCS
T ss_pred eEeEccCcCCcccccccccccccccccccccccceeeeeEEEEecccCCCceEEEEEEEcCCCCcCCCCc--cccccccc
Confidence 999998654200 000 00 01247999999999986 5889999999999999999864 59999999
Q ss_pred CCceEEEEEEE
Q 022157 287 NTSWHRVQVRV 297 (302)
Q Consensus 287 ~n~~h~v~v~v 297 (302)
||+||+|+|++
T Consensus 369 nN~~~rv~v~~ 379 (424)
T 2bii_A 369 NNWWYRVAIIR 379 (424)
T ss_dssp CCSCEEEEEEE
T ss_pred cCcEEEEEEEe
Confidence 99999999997
No 6
>2bih_A Nitrate reductase [NADPH]; flavoprotein, nitrate assimilation, oxidoreductase; HET: MTV; 2.60A {Pichia angusta}
Probab=100.00 E-value=5.3e-77 Score=586.42 Aligned_cols=285 Identities=28% Similarity=0.526 Sum_probs=243.2
Q ss_pred ChhhhhhCCCeEEEEEEEecCC--CCcC---c-------cceecceeEEceeHHHHHHHcCCCCCCCcccCCceEEEEEE
Q 022157 1 MCHLYLNNPKEYINLLLFCAVR--TNLS---F-------LYHFLSAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVS 68 (302)
Q Consensus 1 ~~~L~~~~p~~~~~~~l~C~gr--~~~~---~-------~~ai~~a~w~GV~L~dlL~~ag~~~~~~~~~~~a~~v~~~~ 68 (302)
|+||+++||+++++++|+|+++ .+|+ + ..+|++++|+||+|+|||++||+++ ++++|.|+|
T Consensus 111 l~dL~~~lp~~~~~~~l~CvgN~r~e~~~v~~~~G~~W~~~avs~a~WtGV~L~dlL~~aG~~~-------~A~~V~f~g 183 (474)
T 2bih_A 111 LSDIMEQFDIYSTPVTMVCAGNRRKEQNMVKKGAGFNWGAAGTSTSLWTGCMLGDVIGKARPSK-------RARFVWMEG 183 (474)
T ss_dssp HHHHHHHSCCEEEEEEEECTTTTHHHHHHHSCCSSCCCCSCCEEEEEEEEEEHHHHHHHTCBCT-------TCCEEEEEE
T ss_pred HHHHhhcCCCeEEEEEEEccCCccccccccccccccccccCceeeeEEEeEEHHHHHHhcCCCC-------CceEEEEEe
Confidence 5789656999999999999993 1211 0 1168899999999999999999986 699999999
Q ss_pred eccccccCCCCeEEEEEchhhcCCCCCEEEEEecCCccCCCCCCCceEEEecCcccccceeeeeeeEEeccccCCceeee
Q 022157 69 IDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQK 148 (302)
Q Consensus 69 ~D~~~~~~~~~Y~~sipl~~~~~~~~~vlLAy~mNGepLp~~hG~PlRLvvPg~~G~~~vKwl~~Ie~~~~~~~g~w~~~ 148 (302)
+|..+ .++|.++|||++||++++++||||+|||||||++|||||||||||+||+||||||++|+|+++++++|||.+
T Consensus 184 ~D~~~---~g~Y~~sipl~~ald~~~dvlLA~~mNGepLp~~hG~PlRLVvPg~~G~rsvKWL~~Iev~~~~~~g~~~~~ 260 (474)
T 2bih_A 184 ADNPA---NGAYGTCIRLSWCMDPERCIMIAYQQNGEWLHPDHGKPLRVVIPGVIGGRSVKWLKKLVVSDRPSENWYHYF 260 (474)
T ss_dssp SCCCT---TSSCEEEEEHHHHTCTTTCCEEEEEETTEECCGGGTTTCEEECTTBBGGGSCSSEEEEEEESSCCCCHHHHH
T ss_pred cCCCC---CCCeEEEEEHHHHhCcCCCEEEEEeeCCeECCccCCCeeEEEecccccCCccccCCEEEEEeccCCCceeee
Confidence 98432 237999999999999755799999999999999999999999999999999999999999999999999999
Q ss_pred cCccCCCCCCCCC----CC-cCC-CCCccceeceEEEEeecCCCeec--CCcEEEEEEEEeCCCCCeEEEEEEcCCCCCc
Q 022157 149 DYKMFPPSVNWDN----IN-WKS-RRPLMDFPVQCVICSLEDVNVMK--PGKAKVSGYAVSGGGRGIERVDISVDGGKNW 220 (302)
Q Consensus 149 ~Y~~~~~~~~~~~----~~-~~~-~~~i~~~~v~S~I~~P~~~~~v~--~G~v~i~G~A~sggg~~I~rVEVS~DgG~tW 220 (302)
+|+++|+..+++. .+ |.+ ..+|++|+|||+|+.|.++++|+ .|.|+|+||||||||++|+|||||+|||+||
T Consensus 261 ~yrv~p~~~~~~~~~~~~~~W~~~~~~i~~~~vnS~I~~P~~~e~v~~~~g~~~v~GyA~sGGGr~I~RVEVS~DgG~TW 340 (474)
T 2bih_A 261 DNRVLPTMVTPEMAKSDDRWWKDERYAIYDLNLQTIICKPENQQVIKISEDEYEIAGFGYNGGGVRIGRIEVSLDKGKSW 340 (474)
T ss_dssp SSBCCCTTCCHHHHHTCGGGGSCGGGBCCBCCCEEEEEESCTTCEEECCSCEEEEEEEEECSTTCCEEEEEEESSSSSSC
T ss_pred cccccCCCCCccccccccCccccCcceeeccccceEEecCCCCCEeecCCCeEEEEEEEEcCCCCCEEEEEEEcCCCCCc
Confidence 9999987765432 12 443 45799999999999999999996 4589999999999889999999999999999
Q ss_pred EEeEccCcCCCc--------ccc--cC-CCCCceeeEEeEEEEEC---CCccEEEEEEEeCCCCCCCCCcccccccccCC
Q 022157 221 VEASRYQKTGIP--------YIA--DH-MSSDKWAWVFFEVIIDI---PHSTQIVAKAVDTAANVQPESVETIWNLRGVL 286 (302)
Q Consensus 221 ~~A~L~~~~~~~--------~~~--~~-~~~~~~~W~~W~~~~~~---~g~~~i~~RA~D~~Gn~QP~~~~~~wN~~G~~ 286 (302)
+.|+|..++... +.+ +. -.+++|||++|+++|++ +|+++|+|||+|++||+||+.. +||++||+
T Consensus 341 ~~A~L~~pe~~~r~~~~~~~~g~~~~~~~~~~~~~W~~W~~~~~~~~~~g~~~I~vRA~D~sgn~QP~~~--~WN~~G~~ 418 (474)
T 2bih_A 341 KLADIDYPEDRYREAGYFRLFGGLVNVCDRMSCLCWCFWKLKVPLSELARSKDILIRGMDERMMVQPRTM--YWNVTSML 418 (474)
T ss_dssp EECEEECTHHHHHHTCCEEETTEEECGGGCCCCCSCEEEEEEEEHHHHHTCSEEEEEEEETTCCBCCSSC--CCCTTCCS
T ss_pred eECcccCccccccccccccccccccccccccccceeeeeEEEEecccCCCceEEEEEEEcCCCCcCCCCc--cccccccc
Confidence 999998654100 000 00 01247999999999996 5889999999999999999864 59999999
Q ss_pred CCceEEEEEEE
Q 022157 287 NTSWHRVQVRV 297 (302)
Q Consensus 287 ~n~~h~v~v~v 297 (302)
||+||+|+|++
T Consensus 419 nN~~~rV~v~~ 429 (474)
T 2bih_A 419 NNWWYRVAIIR 429 (474)
T ss_dssp CCSCEEEEEEE
T ss_pred cCcEEEEEEEe
Confidence 99999999997
No 7
>2xts_A Sulfite dehydrogenase; oxidoreductase-electron transport complex, SOX system, sulfa oxidation, molybdenum cofactor, heme, electron transfer; HET: MTE HEC; 1.33A {Paracoccus pantotrophus}
Probab=100.00 E-value=1.7e-70 Score=530.30 Aligned_cols=260 Identities=28% Similarity=0.388 Sum_probs=229.5
Q ss_pred ChhhhhhCCCeEEEEEEEecCCCC--cC--cc-------ceecceeEEceeHHHHHHHcCCCCCCCcccCCceEEEEEEe
Q 022157 1 MCHLYLNNPKEYINLLLFCAVRTN--LS--FL-------YHFLSAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSI 69 (302)
Q Consensus 1 ~~~L~~~~p~~~~~~~l~C~gr~~--~~--~~-------~ai~~a~w~GV~L~dlL~~ag~~~~~~~~~~~a~~v~~~~~ 69 (302)
|+||+ +||+++++++|+|++++. ++ ++ .+|++++|+||+|+|||++||+++ ++++|.|+|+
T Consensus 103 l~dL~-~lp~~~~~~~l~C~gn~r~~w~~~~~~g~~w~~g~i~~~~W~GV~L~dlL~~ag~~~-------~a~~V~~~~~ 174 (390)
T 2xts_A 103 FEDLL-RFPRTTTTAFCECAANGGMEWGGAQLEGCQYTQGMIHNMEYVGVPLSVLLAEAGVKP-------EGKWLYAEGA 174 (390)
T ss_dssp HHHHT-TSCCEEEEEEEECTTTTGGGTTSCCCSSHHHHHCSEEEEEEEEEEHHHHHHHHCBCT-------TCCEEEEEES
T ss_pred HHHHh-cCCCEEEEEEEEecCCcccccccccccccccccCceeeeEEEEEEHHHHHHhcCCCC-------CceEEEEEec
Confidence 57895 899999999999999422 11 11 178999999999999999999986 5899999999
Q ss_pred ccccccCCCCeEEEEEchhhcCCCCCEEEEEecCCccCCCCCCCceEEEecCcccccceeeeeeeEEeccccCCceeeec
Q 022157 70 DKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKD 149 (302)
Q Consensus 70 D~~~~~~~~~Y~~sipl~~~~~~~~~vlLAy~mNGepLp~~hG~PlRLvvPg~~G~~~vKwl~~Ie~~~~~~~g~w~~~~ 149 (302)
| +..|.++|||+++|+ ++||||+|||||||++|||||||||||+||+||||||++|+|+++++++|||+.+
T Consensus 175 D------g~~y~~sipl~~a~~---~~lLA~~mNGepL~~~hG~PlRLVvPg~~G~~svKwl~~I~v~~~~~~~~~~~~~ 245 (390)
T 2xts_A 175 D------ASSNGRSFPMEKVMD---DVMLAFFANGEALRKEHGYPARLVVPGWEGNMWVKWVRRLGIYDKAVESREETSK 245 (390)
T ss_dssp S------TTCCCEEEEHHHHHH---HCEEEEEETTEECCGGGTTTCEEECTTBCGGGSCBSEEEEEEESSCCCCGGGTTS
T ss_pred C------CCeEEEEEEHHHHhc---CcEEEEeECCeECCccCCCceEEEecCccCcccceeccEEEEEecCCCCchhhcc
Confidence 8 123999999999996 7999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCCCCCCCcCCCCCccceeceEEEEeecCCCeec--CCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeEccC
Q 022157 150 YKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMK--PGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQ 227 (302)
Q Consensus 150 Y~~~~~~~~~~~~~~~~~~~i~~~~v~S~I~~P~~~~~v~--~G~v~i~G~A~sggg~~I~rVEVS~DgG~tW~~A~L~~ 227 (302)
|+.+.|+... ..++..|+|||+|+.|.+++.|+ +|.++|+||||+|++ +|+|||||+|+|+||++|+|..
T Consensus 246 y~~~~~~~~~-------~~~~~~~~vnS~I~~P~~~~~i~~~~g~~~v~G~A~~G~g-~I~rVevS~DgG~tW~~A~L~~ 317 (390)
T 2xts_A 246 YTDLMPDGRA-------RKWTWVMDAKSVITSPSPQVPIRHGKGPLVISGLAWSGNG-RITRVDVSLDGGKNWTTARITG 317 (390)
T ss_dssp SCEECTTSCE-------EECCCBCCCEEEEEESBTTBCCCSCSEEEEEEEEEECTTS-CEEEEEEESBTTSSCEECEEES
T ss_pred ccccCCCCCc-------cccceeecCceeeecCCCCCEeecCCCcEEEEEEEEcCCC-cEEEEEEecCCCCcEEEeeccC
Confidence 9987654221 13478999999999999999985 468999999999876 7999999999999999999998
Q ss_pred cCCCcccccCCCCCceeeEEeEEEEEC-CCccEEEEEEEeCCCCCCCCCccccccc----ccCCCCceEEEEEEE
Q 022157 228 KTGIPYIADHMSSDKWAWVFFEVIIDI-PHSTQIVAKAVDTAANVQPESVETIWNL----RGVLNTSWHRVQVRV 297 (302)
Q Consensus 228 ~~~~~~~~~~~~~~~~~W~~W~~~~~~-~g~~~i~~RA~D~~Gn~QP~~~~~~wN~----~G~~~n~~h~v~v~v 297 (302)
+.. +++|++|++.|.+ .+.++|+|||+|++||+||+.. .+||+ .||++|++|+++|..
T Consensus 318 ~~~-----------~~aw~~w~~~~~~~~g~~~i~vRA~D~~gn~QP~~~-~~~~~~g~~~gy~~n~i~~~~v~~ 380 (390)
T 2xts_A 318 QAL-----------PKALTRFHLDIDWDGSEMLLQSRAVDETGYVQPTKD-ALRAIRGRNNVYHNNGIQTWWVKA 380 (390)
T ss_dssp CCC-----------TTSCEEEEEEEEECSCCEEEEEEEEETTCCBCCCHH-HHHHHHCSCCCSCCCCCCEEEECT
T ss_pred CCC-----------CCceEEEEEEEEcCCCccEEEEEEEcCCCCcCCCcc-cccccCccccceeeeeEEEEEEcc
Confidence 765 7899999999987 6788999999999999999864 36777 579999999999864
No 8
>1xdy_A Bacterial sulfite oxidase; bioinformatics, sequence analysis, electron transfer, oxidoreductase, molybdoenzymes, molybdopterin; HET: MTE; 2.20A {Escherichia coli} SCOP: d.176.1.1 PDB: 1xdq_A*
Probab=100.00 E-value=4.5e-43 Score=327.49 Aligned_cols=198 Identities=19% Similarity=0.225 Sum_probs=153.9
Q ss_pred ChhhhhhCCCeEEEEEEEecCCCCcCccceecceeEEceeHHHHHHHcCCCCCCCcccCCceEEEEEEecccc---ccC-
Q 022157 1 MCHLYLNNPKEYINLLLFCAVRTNLSFLYHFLSAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCK---EEN- 76 (302)
Q Consensus 1 ~~~L~~~~p~~~~~~~l~C~gr~~~~~~~ai~~a~w~GV~L~dlL~~ag~~~~~~~~~~~a~~v~~~~~D~~~---~~~- 76 (302)
|+||+++||+++++++|+|+++|++ ++.|+||+|+|||++||+++ ++++|.|+|+|... ++.
T Consensus 84 l~dL~~~lP~~e~~~~l~Cv~~Ws~-------~~~W~GV~L~dLL~~aG~~~-------~A~~V~f~~~dd~~~~~G~~~ 149 (298)
T 1xdy_A 84 HDDLTRRFPLEERIYRMRCVEAWSM-------VVPWIGFPLHKLLALAEPTS-------NAKYVAFETIYAPEQMPGQQD 149 (298)
T ss_dssp HHHHHHTSCCEEEEEEEEETTTEEE-------EEEEEEEEHHHHHHHHCBCT-------TCCEEEEEECCCTTTCGGGTC
T ss_pred HHHHhccCCCeEEEEEEEecCCCcc-------eeEEEeEEHHHHHHHcCCCC-------CCeEEEEEeCCChhcccCccc
Confidence 5789756999999999999998763 79999999999999999986 69999999996311 111
Q ss_pred -------CCCeEEEEEchhhcCCCCCEEEEEecCCccCCCCCCCceEEEecCcccccceeeeeeeEEeccccCCceeeec
Q 022157 77 -------GGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKD 149 (302)
Q Consensus 77 -------~~~Y~~sipl~~~~~~~~~vlLAy~mNGepLp~~hG~PlRLvvPg~~G~~~vKwl~~Ie~~~~~~~g~w~~~~ 149 (302)
..+|.++|||++||++ ++||||+|||||||++|||||||||||+||+||||||++|+|+++++++|||+.+
T Consensus 150 ~~~~~~~~~~Y~~slpl~~a~~~--~~lLA~~mNGepLp~~hG~PlRLVVPg~yG~ksvKwl~~Iev~~~~~~g~We~~~ 227 (298)
T 1xdy_A 150 RFIGGGLKYPYVEGLRLDEAMHP--LTLMTVGVYGKALPPQNGAPVRLIVPWKYGFKGIKSIVSIKLTRERPPTTWNLAA 227 (298)
T ss_dssp TTTTTTCCSSCEEEEEHHHHHST--TCEEEEEETTEECCGGGTCSCEEECTTBCGGGSCCSEEEEEEESSCCCCHHHHHC
T ss_pred cccccccCCCeEEEEEHHHhcCC--CEEEEEeeCCeECCcccCCceEEEeCCccccCcceeccEEEEEeCCCCCchhhcC
Confidence 2369999999999996 7999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCCCCCCCcCCCCCccceeceEEEEeecCCCeecCCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEE
Q 022157 150 YKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVE 222 (302)
Q Consensus 150 Y~~~~~~~~~~~~~~~~~~~i~~~~v~S~I~~P~~~~~v~~G~v~i~G~A~sggg~~I~rVEVS~DgG~tW~~ 222 (302)
|+.+....+ .+..-..|.++|..+++|. + .+. +. .-++..++|.|.+..|++++.++|.++..-+
T Consensus 228 y~~yg~~~n---~n~~v~~P~w~q~~er~i~-~-g~~-~~--~~r~~t~~fnGy~~~va~ly~~md~~~~~~~ 292 (298)
T 1xdy_A 228 PDEYGFYAN---VNPYVDHPRWSQATERFIG-S-GGI-LD--VQRQPTLLFNGYADQVASLYRGLDLRENFLE 292 (298)
T ss_dssp TTTCCSSCB---CCTTSCBTTBCCSEEEECC-C-C---------CEECCGGGGTHHHHHHHHTTCCC------
T ss_pred ccccCcccC---CCCCCCCCcccccceeEEc-C-CCc-ee--ecccCceeecccHHHhhhhhhCcccchhhhh
Confidence 887632111 1111123455666666664 1 100 00 1356888999988899999999999876543
No 9
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=99.24 E-value=2.2e-11 Score=96.11 Aligned_cols=76 Identities=20% Similarity=0.106 Sum_probs=65.0
Q ss_pred EEEeecCCCeecCC-cEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeEccCcCCCcccccCCCCCceeeEEeEEEEEC-C
Q 022157 178 VICSLEDVNVMKPG-KAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDI-P 255 (302)
Q Consensus 178 ~I~~P~~~~~v~~G-~v~i~G~A~sggg~~I~rVEVS~DgG~tW~~A~L~~~~~~~~~~~~~~~~~~~W~~W~~~~~~-~ 255 (302)
.|+.|.+|+.+..| .++|.+-|++..| .|.||||++||+. +. .-+|..|+|.|+. +
T Consensus 3 sItsP~~ga~v~~g~~v~i~a~A~D~dg-~V~kVef~vdg~~------vg---------------~dt~apy~~~w~~~~ 60 (98)
T 3pe9_A 3 KLTAPKSNVVAYGNEFLKITATASDSDG-KISRVDFLVDGEV------IG---------------SDREAPYEYEWKAVE 60 (98)
T ss_dssp EEEECCTTCCEETTSEEEEEEEECCSSS-CEEEEEEEETTEE------EE---------------EECSSSEEEEEECCS
T ss_pred EEeeCCCcCEEcCCCEEEEEEEEEeCCC-CEEEEEEEECCEE------ec---------------ccccCCEEEEEEcCC
Confidence 58999999999987 5999999998644 7999999999952 21 2367899999997 7
Q ss_pred CccEEEEEEEeCCCCCCCCC
Q 022157 256 HSTQIVAKAVDTAANVQPES 275 (302)
Q Consensus 256 g~~~i~~RA~D~~Gn~QP~~ 275 (302)
|.|+|.+||+|.+|++|...
T Consensus 61 G~htl~a~AtD~~G~~~tS~ 80 (98)
T 3pe9_A 61 GNHEISVIAYDDDDAASTPD 80 (98)
T ss_dssp EEEEEEEEEEETTCCBCCCE
T ss_pred ccEEEEEEEEECCCCEEeee
Confidence 99999999999999999753
No 10
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=98.19 E-value=2.6e-06 Score=74.22 Aligned_cols=74 Identities=14% Similarity=-0.017 Sum_probs=60.0
Q ss_pred EEEeecCCCeecCC-cEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeEccCcCCCcccccCCCCCceeeEEeEEEEEC--
Q 022157 178 VICSLEDVNVMKPG-KAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDI-- 254 (302)
Q Consensus 178 ~I~~P~~~~~v~~G-~v~i~G~A~sggg~~I~rVEVS~DgG~tW~~A~L~~~~~~~~~~~~~~~~~~~W~~W~~~~~~-- 254 (302)
.|+.|.+|+.+..| .++|.+-|+. .+ +|.+|||.+||. .+.. -.|..|++.|..
T Consensus 3 ~ItsP~~g~~~~~g~~vtv~~~As~-d~-~V~~Ve~~~dg~------~v~~---------------~t~~~ys~~~~~~~ 59 (190)
T 3pdd_A 3 TIDSPVAGERFEAGKDINISATVKS-KT-PVSKVEFYNGDT------LISS---------------DTTAPYTAKITGAA 59 (190)
T ss_dssp EEEESCTTCEEETTSCEEEEEEECC-SS-CEEEEEEEETTE------EEEE---------------ECSSSEEEEECSCC
T ss_pred EEecCCCCCEEcCCCeEEEEEEEeC-CC-CEEEEEEEECCE------EEcc---------------ccCCceEEEeccCC
Confidence 58999999999988 7999999994 44 999999999974 1211 134567778875
Q ss_pred CCccEEEEEEEeCCCCCCCC
Q 022157 255 PHSTQIVAKAVDTAANVQPE 274 (302)
Q Consensus 255 ~g~~~i~~RA~D~~Gn~QP~ 274 (302)
.|.|+|.+||+|.+||++..
T Consensus 60 ~G~htlta~A~D~aGn~s~s 79 (190)
T 3pdd_A 60 VGAYNLKAVAVLSDGRRIES 79 (190)
T ss_dssp SEEEEEEEEEEETTSCEEEC
T ss_pred CccEEEEEEEEECCCCEeee
Confidence 68999999999999999764
No 11
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=97.68 E-value=0.00018 Score=62.53 Aligned_cols=78 Identities=19% Similarity=0.122 Sum_probs=58.0
Q ss_pred eceEEEEeecCCCeecCC-cEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeEccCcCCCcccccCCCCCceeeEEeEEEE
Q 022157 174 PVQCVICSLEDVNVMKPG-KAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVII 252 (302)
Q Consensus 174 ~v~S~I~~P~~~~~v~~G-~v~i~G~A~sggg~~I~rVEVS~DgG~tW~~A~L~~~~~~~~~~~~~~~~~~~W~~W~~~~ 252 (302)
++.-.|+.|.++..+..| .++|.+-|-+..| .|.+|||.+||. .+.... ...|++.|
T Consensus 91 ~Ptv~itsP~~g~~~~~~~~vtl~~~AsD~~g-~V~~Ve~~~dg~------~v~t~t---------------~~~y~~~~ 148 (190)
T 3pdd_A 91 KPTVKLTAPKSNVVAYGNEFLKITATASDSDG-KISRVDFLVDGE------VIGSDR---------------EAPYEYEW 148 (190)
T ss_dssp CCEEEEEECCTTCCCBTTSEEEEEEEEECSSS-CEEEEEEEETTE------EEEEEC---------------SSSEEEEE
T ss_pred CCceeecCCCCCcEEecCCeEEEEEEEECCCC-cEEEEEEEECCE------EEeccc---------------CCCEEEEE
Confidence 344568899999988766 7999999976433 699999999984 121111 12455666
Q ss_pred EC-CCccEEEEEEEeCCCCCCC
Q 022157 253 DI-PHSTQIVAKAVDTAANVQP 273 (302)
Q Consensus 253 ~~-~g~~~i~~RA~D~~Gn~QP 273 (302)
.. .|.|+|.+||+|.+||+-.
T Consensus 149 ~~~~G~~tl~a~A~D~aGn~s~ 170 (190)
T 3pdd_A 149 KAVEGNHEISVIAYDDDDAAST 170 (190)
T ss_dssp ECCSEEEEEEEEEEETTCCBCC
T ss_pred ecCCeeEEEEEEEEECCCCEEe
Confidence 65 7899999999999999865
No 12
>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ...
Probab=69.27 E-value=22 Score=36.12 Aligned_cols=54 Identities=13% Similarity=0.071 Sum_probs=42.9
Q ss_pred ceEEEEeecCCCeecCCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeEccCc
Q 022157 175 VQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQK 228 (302)
Q Consensus 175 v~S~I~~P~~~~~v~~G~v~i~G~A~sggg~~I~rVEVS~DgG~tW~~A~L~~~ 228 (302)
.+..|..|..|-.++.|++.+--++....+..+.-+-.|-|+|+||+......+
T Consensus 186 ~~~~~~GgGsGI~m~dGtLVfPv~~~~~~g~~~s~iiySdD~G~TW~ls~~~~~ 239 (648)
T 1ms9_A 186 TNQFLGGAGVAIVASNGNLVYPVQVTNKKKQVFSKIFYSEDEGKTWKFGKGRSA 239 (648)
T ss_dssp EEEEEECSEECEECTTSCEEEEEEEEETTCCEEEEEEEESSTTSSCEECSCCCC
T ss_pred eEEEEecCCceEEecCCcEEEEEEEEcccccceeeEEEecCCCCCEEECCCCCC
Confidence 466788888888888998877777776556678889999999999998765443
No 13
>4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis}
Probab=64.06 E-value=8.4 Score=38.00 Aligned_cols=50 Identities=14% Similarity=0.051 Sum_probs=39.0
Q ss_pred eEEEEeecCCCeecCCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeEc
Q 022157 176 QCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASR 225 (302)
Q Consensus 176 ~S~I~~P~~~~~v~~G~v~i~G~A~sggg~~I~rVEVS~DgG~tW~~A~L 225 (302)
..++..|..|-.++.|++.+-.++....+.....+..|.|+|+||+....
T Consensus 321 ~~~~~g~G~GI~l~dGrLv~P~~~~~~~g~~~s~i~~S~D~G~TW~~~~~ 370 (523)
T 4fj6_A 321 YFLLQGPGRGITMQDGTLVFPIQFIDATRVPNAGIMYSKDRGKTWHLHNL 370 (523)
T ss_dssp SEEEECSEECEECTTSCEEEEEEEECTTSCEEEEEEEESSTTSSCEECCC
T ss_pred eEEecCCCcceEEeCCeEEEEEEEEcCCCCEEEEEEEECCCCCeEEECCC
Confidence 34667777777888898777777776555568899999999999997754
No 14
>4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis}
Probab=62.19 E-value=14 Score=36.40 Aligned_cols=16 Identities=38% Similarity=0.619 Sum_probs=14.6
Q ss_pred EEEEEcCCCCCcEEeE
Q 022157 209 RVDISVDGGKNWVEAS 224 (302)
Q Consensus 209 rVEVS~DgG~tW~~A~ 224 (302)
+|-.|.|+|+||+++.
T Consensus 401 ~v~~S~D~G~TWt~~~ 416 (523)
T 4fj6_A 401 AVATTKDLGKTWTEHP 416 (523)
T ss_dssp EEEEESSTTSSCEECT
T ss_pred EEEEECCCCCccCcCc
Confidence 7889999999999984
No 15
>1w0p_A Sialidase; hydrolase, neuraminidase, lectin; HET: SIA; 1.6A {Vibrio cholerae} SCOP: b.29.1.8 b.29.1.8 b.68.1.1 PDB: 1w0o_A* 1kit_A 2w68_A*
Probab=57.44 E-value=12 Score=38.76 Aligned_cols=51 Identities=18% Similarity=0.047 Sum_probs=39.3
Q ss_pred ceEEEEeecCCCeec---------CCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeEcc
Q 022157 175 VQCVICSLEDVNVMK---------PGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRY 226 (302)
Q Consensus 175 v~S~I~~P~~~~~v~---------~G~v~i~G~A~sggg~~I~rVEVS~DgG~tW~~A~L~ 226 (302)
+++++..|.+|-.++ .|++.+-.++..+ +..-..+.+|-|+|+||+.....
T Consensus 541 ~~~~~~GPG~GIql~~~p~~~g~~dGRLV~P~~~~~~-~~~~s~~~ySdD~GkTW~~g~~i 600 (781)
T 1w0p_A 541 NASVNPGPGHGITLTRQQNISGSQNGRLIYPAIVLDR-FFLNVMSIYSDDGGSNWQTGSTL 600 (781)
T ss_dssp CSEEECCSSCCEECCCCTTSTTCCTTCEEEEEEEESS-SCEEEEEEEESSSSSSCEECCCC
T ss_pred cceeecCCCceEEEeeccccCcCCCCeEEEEEEEeCC-CCcEEEEEEECCCCCcccccccc
Confidence 466778888887776 6888887777754 33457789999999999987764
No 16
>3tp4_A Computational design of enzyme; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.98A {Synthetic construct} PDB: 2x2y_A 2bvy_A 2bvt_A
Probab=53.60 E-value=47 Score=32.44 Aligned_cols=77 Identities=13% Similarity=0.083 Sum_probs=54.6
Q ss_pred ceEEEEeecCCCeecCCcEEEEEEEEeCCCCCeEEEEEEcCCCCC---cEEeEccCcCCCcccccCCCCCceeeEEeEEE
Q 022157 175 VQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKN---WVEASRYQKTGIPYIADHMSSDKWAWVFFEVI 251 (302)
Q Consensus 175 v~S~I~~P~~~~~v~~G~v~i~G~A~sggg~~I~rVEVS~DgG~t---W~~A~L~~~~~~~~~~~~~~~~~~~W~~W~~~ 251 (302)
....|..|.+|+.|..+.++|+=-.-. . ..++|-+++|++.+ =.+..|+.. + .|+.+
T Consensus 373 ~~~~~~~p~~~~~~~~~~~~i~~~v~~--~-~~~~v~~~~~~~~~~~~~~~~~~~~~-g----------------~~~~~ 432 (475)
T 3tp4_A 373 PVVHIASPADGARVASAPTTVRVRVGG--T-DVQSVTVEVAQGGTVVDTLDLAYDGA-L----------------WWTAP 432 (475)
T ss_dssp CEEEEEESCTTCEECSSSEEEEEEEES--S-CEEEEEEEEEETTEEEEEEECEECSS-S----------------CEEEE
T ss_pred ceEEEeccCCCCEEcccceEEEEEEec--C-CCceEEEEeCCCCccccceeeeeccC-c----------------eEeec
Confidence 345799999999999888788766543 2 78999999998854 122222221 2 58889
Q ss_pred EECC------CccEEEEEEEeCCCCC
Q 022157 252 IDIP------HSTQIVAKAVDTAANV 271 (302)
Q Consensus 252 ~~~~------g~~~i~~RA~D~~Gn~ 271 (302)
|.+. +..+|.+.||..+|..
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (475)
T 3tp4_A 433 WSPTSAQLDNSTYTVTATATTAAGTL 458 (475)
T ss_dssp ECCC--------CEEEEEEEETTEEE
T ss_pred cCCChhhccCceEEEEEEEeecccee
Confidence 9872 4579999999998853
No 17
>2oxg_Z SOXZ protein; immunoglobulin-like beta-sandwich fold, transport protein; 1.40A {Paracoccus denitrificans} PDB: 2ox5_Z 2oxh_Z*
Probab=52.62 E-value=31 Score=26.69 Aligned_cols=55 Identities=16% Similarity=0.186 Sum_probs=36.3
Q ss_pred CCeEEEEEEcCCCCCcEEeEccCcCCCcccccCCCCCceeeEEeEEEEECCCccEEEEEEEeCCCCCCC
Q 022157 205 RGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAANVQP 273 (302)
Q Consensus 205 ~~I~rVEVS~DgG~tW~~A~L~~~~~~~~~~~~~~~~~~~W~~W~~~~~~~g~~~i~~RA~D~~Gn~QP 273 (302)
+=|.+|+++.+ |+.--.+++...... + =.++|.+...+..+|.++++|..|++--
T Consensus 46 ~~I~~v~~~~n-g~~v~~~~~~~~iS~---------N----P~~~F~~~~~~~g~l~v~~~Dn~G~~~~ 100 (108)
T 2oxg_Z 46 SIINRFTCELN-GVNVVDVAIDPAVST---------N----PYFEFDAKVDAAGEFKFTWYDDDGSVYE 100 (108)
T ss_dssp BCEEEEEEEET-TEEEEEEEECTTBCS---------S----CEEEEEEEECSSEEEEEEEEETTSCEEE
T ss_pred HheEEEEEEEC-CEEEEEEEeCCcccc---------C----CeEEEEEecCCCcEEEEEEEECCCCEEE
Confidence 35788888754 457777777644310 1 1566777664444899999999998643
No 18
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=52.44 E-value=23 Score=32.89 Aligned_cols=37 Identities=22% Similarity=0.250 Sum_probs=26.0
Q ss_pred cCCcEEEEEEEEeCC-CCCeEEEEEEcCCCCCcEEeEc
Q 022157 189 KPGKAKVSGYAVSGG-GRGIERVDISVDGGKNWVEASR 225 (302)
Q Consensus 189 ~~G~v~i~G~A~sgg-g~~I~rVEVS~DgG~tW~~A~L 225 (302)
+.|.+.+-|.++... ...-..|..|.|+|+||+....
T Consensus 96 ~~G~ll~~~~~~~~d~~~~~~~v~~S~D~G~TW~~~~~ 133 (355)
T 3a72_A 96 KKGTLLLAGSSIPTDLSSTDIVLYASQDDGMTWDFVSH 133 (355)
T ss_dssp CTTCEEEEEEECCTTCCCEEEEEEEESSTTSCCEEEEE
T ss_pred CCCcEEEEEeeecCCCCCceEEEEEECCCCccCccCcc
Confidence 467766667666421 1235679999999999998765
No 19
>1v8h_A Sulfur oxidation protein SOXZ; lithotrophic sulfur oxidation, unknown function, structural genomics; 1.20A {Thermus thermophilus HB8} SCOP: b.1.18.19
Probab=52.22 E-value=34 Score=26.38 Aligned_cols=55 Identities=16% Similarity=0.228 Sum_probs=36.9
Q ss_pred CCeEEEEEEcCCCCCcEEeEccCcCCCcccccCCCCCceeeEEeEEEEECCCccEEEEEEEeCCCCCCC
Q 022157 205 RGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAANVQP 273 (302)
Q Consensus 205 ~~I~rVEVS~DgG~tW~~A~L~~~~~~~~~~~~~~~~~~~W~~W~~~~~~~g~~~i~~RA~D~~Gn~QP 273 (302)
+=|.+|+++.+| +.--.|++..... . + =.++|.+...+...|.++++|..|++--
T Consensus 45 ~~I~~v~~~~ng-~~v~~~~~~~~iS--------~-n----P~~~F~~~~~~~g~l~v~~~Dn~G~~~~ 99 (107)
T 1v8h_A 45 KYINLVEVYFEG-EKVAEARPGPSTS--------A-N----PLYAFKFKAEKAGTFTIKLKDTDGDTGE 99 (107)
T ss_dssp BCEEEEEEEETT-EEEEEECCCSSCC--------S-S----CEEEEEEECCSCEEEEEEEEETTSCEEE
T ss_pred HheEEEEEEECC-EEEEEEEeCCccc--------c-C----CeEEEEEecCCCceEEEEEEECCCCEEE
Confidence 357888888544 5666777764431 0 1 1667777775555699999999998643
No 20
>1so7_A Sialidase 2; neuraminidase, ganglioside, sugar-induced form; 1.49A {Homo sapiens} SCOP: b.68.1.1 PDB: 1snt_A 1vcu_A* 2f0z_A* 2f10_A* 2f11_A* 2f12_A* 2f13_A* 2f28_A 2f29_A* 2f24_A 2f25_A* 2f26_A 2f27_A*
Probab=52.00 E-value=25 Score=32.19 Aligned_cols=50 Identities=14% Similarity=0.081 Sum_probs=33.4
Q ss_pred eEEEEeecCCCeecC--CcEEEEEEEEeCC-----CCCeEEEEEEcCCCCCcEEeEc
Q 022157 176 QCVICSLEDVNVMKP--GKAKVSGYAVSGG-----GRGIERVDISVDGGKNWVEASR 225 (302)
Q Consensus 176 ~S~I~~P~~~~~v~~--G~v~i~G~A~sgg-----g~~I~rVEVS~DgG~tW~~A~L 225 (302)
..++..|..+-.+.. |++.+-.++.... +.....+-.|.|+|+||+....
T Consensus 157 ~~~~~~pg~gi~l~~~~G~lv~p~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~~ 213 (382)
T 1so7_A 157 STFAVGPGHCLQLNDRARSLVVPAYAYRKLHPIQRPIPSAFCFLSHDHGRTWARGHF 213 (382)
T ss_dssp EEEEECSSCCEECCSTTCCEEEEEEEEECCSSSSCCEEEEEEEEESSTTSSCEECCC
T ss_pred eeeccCCCcEeecccCCCcEEEEEEEecccccccCCCceeEEEEECCCCceeEcCcc
Confidence 345666666666666 8766655555321 1346778899999999998764
No 21
>4eib_A Glucoamylase; beta barrel, starch binding, amylose, hydrolase; 1.86A {Rhizopus oryzae}
Probab=51.74 E-value=13 Score=29.28 Aligned_cols=59 Identities=20% Similarity=0.187 Sum_probs=39.3
Q ss_pred cCCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEE------eEccCcCCCcccccCCCCCceeeEEeEEEEECCCccEEEE
Q 022157 189 KPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVE------ASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVA 262 (302)
Q Consensus 189 ~~G~v~i~G~A~sggg~~I~rVEVS~DgG~tW~~------A~L~~~~~~~~~~~~~~~~~~~W~~W~~~~~~~g~~~i~~ 262 (302)
-.|.|.|+=+|+. +...|.-|+ +|..|+. |.-..... .-.+..|.|..+.+|..+..+
T Consensus 41 LsGtI~V~NlAye----K~V~VrYs~-~~d~W~s~~~~~~A~y~s~~~-----------~~~~e~~~F~~~apGa~qFaI 104 (109)
T 4eib_A 41 FSGKIYVKNIAYS----KKVTVVYAD-GSDNWNNNGNIIAASFSGPIS-----------GSNYEYWTFSASVKGIKEFYI 104 (109)
T ss_dssp EEEEEEEECCSSC----EEEEEEEEC-TTSCCTTTTCEEECEEEEECT-----------TSSEEEEEEEEECSCCCEEEE
T ss_pred EEEEEEEEecccc----eEEEEEEee-cCCCcccCCcEeeEEEecCCC-----------CCCeEEEEEEEECCCCEEEEE
Confidence 3577888888863 667777774 4567776 33222211 236899999999988776665
Q ss_pred E
Q 022157 263 K 263 (302)
Q Consensus 263 R 263 (302)
|
T Consensus 105 r 105 (109)
T 4eib_A 105 K 105 (109)
T ss_dssp E
T ss_pred E
Confidence 5
No 22
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=43.57 E-value=25 Score=32.61 Aligned_cols=20 Identities=35% Similarity=0.328 Sum_probs=16.6
Q ss_pred CCeEEEEEEcCCCCCcEEeE
Q 022157 205 RGIERVDISVDGGKNWVEAS 224 (302)
Q Consensus 205 ~~I~rVEVS~DgG~tW~~A~ 224 (302)
.....|..|.|+|+||++..
T Consensus 49 ~~~~~v~rS~DgG~TW~~~~ 68 (355)
T 3a72_A 49 AVYFPIYRSKDHGKTWNEIS 68 (355)
T ss_dssp CCCEEEEEESSTTSCCEEEE
T ss_pred CceEEEEEEcCCCcCcCCCc
Confidence 35567899999999999964
No 23
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=43.20 E-value=36 Score=31.73 Aligned_cols=38 Identities=24% Similarity=0.312 Sum_probs=26.0
Q ss_pred ecCCcEEEEEEEEeCC-CCCeEEEEEEcCCCCCcEEeEc
Q 022157 188 MKPGKAKVSGYAVSGG-GRGIERVDISVDGGKNWVEASR 225 (302)
Q Consensus 188 v~~G~v~i~G~A~sgg-g~~I~rVEVS~DgG~tW~~A~L 225 (302)
++.|++.+-+.++... ...-..|..|.|+|+||+....
T Consensus 100 ~~~G~lL~~~~s~~~d~~~~~i~v~~S~D~G~TW~~~~~ 138 (367)
T 2ydt_A 100 YPKGTVLCSGSSIPSDLSETLIEVYASRDKGYTWEFVSH 138 (367)
T ss_dssp BCTTCEEEEEEECCTTCCCEEEEEEEESSSSSCCEEEEE
T ss_pred cCCCcEEEEEecccCCCCCCeEEEEEECCCCCCCcCCee
Confidence 3467777666665421 1245679999999999998754
No 24
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=41.28 E-value=29 Score=32.44 Aligned_cols=21 Identities=38% Similarity=0.422 Sum_probs=16.9
Q ss_pred CCCeEEEEEEcCCCCCcEEeE
Q 022157 204 GRGIERVDISVDGGKNWVEAS 224 (302)
Q Consensus 204 g~~I~rVEVS~DgG~tW~~A~ 224 (302)
+.....|..|.|+|+||++..
T Consensus 53 ~~~~~~v~rS~DgG~TW~~~~ 73 (367)
T 2ydt_A 53 PNVWFPIVKSKDGGKTWKEIS 73 (367)
T ss_dssp SCCCEEEEEESSTTSSCEEEE
T ss_pred CCeEEEEEEECCCCcCcCcCc
Confidence 335567889999999999964
No 25
>3sil_A Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1.05A {Salmonella typhimurium} SCOP: b.68.1.1 PDB: 1dim_A* 1dil_A* 2sil_A 2sim_A*
Probab=37.27 E-value=45 Score=31.31 Aligned_cols=50 Identities=16% Similarity=0.100 Sum_probs=37.5
Q ss_pred ceEEEEeecCCCeecCCcEEEEEEEEeC---CCCCeEEEEEEcCCCCCcEEeEc
Q 022157 175 VQCVICSLEDVNVMKPGKAKVSGYAVSG---GGRGIERVDISVDGGKNWVEASR 225 (302)
Q Consensus 175 v~S~I~~P~~~~~v~~G~v~i~G~A~sg---gg~~I~rVEVS~DgG~tW~~A~L 225 (302)
...+|..|.+|-.++.|++.+--++... .+..+.-+-.|-| |+||+....
T Consensus 168 ~~~~~~g~G~GI~l~~G~Lv~P~~~~~~~~~~~~~~s~~iyS~D-G~tW~~~~~ 220 (379)
T 3sil_A 168 ISAMLGGVGSGLQLNDGKLVFPVQMVRTKNITTVLNTSFIYSTD-GITWSLPSG 220 (379)
T ss_dssp EEEEEECSEECEECTTSCEEEEEEEEECTTSSCSEEEEEEEESS-SSSEECCSC
T ss_pred eeeecCCCCceEEEcCCcEEEEEEEeeccCCCCCEEEEEEEcCC-CCCeEECCC
Confidence 3567788888888889987776666532 2456888999999 999997654
No 26
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=33.70 E-value=43 Score=31.86 Aligned_cols=66 Identities=14% Similarity=0.123 Sum_probs=33.1
Q ss_pred EEEEEEcCCCCCcEEeEccC-cCCCc-------c---cccC-CCCCceeeEEeEEEEEC---CCccEEEEEEEeCCCCCC
Q 022157 208 ERVDISVDGGKNWVEASRYQ-KTGIP-------Y---IADH-MSSDKWAWVFFEVIIDI---PHSTQIVAKAVDTAANVQ 272 (302)
Q Consensus 208 ~rVEVS~DgG~tW~~A~L~~-~~~~~-------~---~~~~-~~~~~~~W~~W~~~~~~---~g~~~i~~RA~D~~Gn~Q 272 (302)
.++|.|+|+|.+|+.-.... |.... . .+.. ....-..|++..+.+++ ...+.+.-.-.+.+++.+
T Consensus 101 V~LeYStd~G~sW~~v~~~c~P~~~~~~C~~~~~~~~~~si~~a~~~~~W~riti~lP~~~~s~~TrFRW~Q~~~~~~~~ 180 (387)
T 2ddu_A 101 VLLQYSHDAGMSWFLVKEGCFPASAGKGCEGNSRELSEPTVYYTGDFEEWTRITIAIPRSLASSKTRFRWIQESSSQKNV 180 (387)
T ss_dssp EEEEEESSTTSCCEESCCCBCTTCCSSSSCTTSCCCBCCSEECTTSCSSCEEEEEECCGGGCSSCCEEEEECC------C
T ss_pred EEEEEEeCCCcceEeeecccccCCCCcccccccccccCcceeccccccCceEEEEECChhhcCCcceEEEEcccCCcccC
Confidence 57999999999999754322 11100 0 0000 01113579999888887 344555544444444444
Q ss_pred C
Q 022157 273 P 273 (302)
Q Consensus 273 P 273 (302)
|
T Consensus 181 ~ 181 (387)
T 2ddu_A 181 P 181 (387)
T ss_dssp C
T ss_pred c
Confidence 4
No 27
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.71 E-value=53 Score=23.74 Aligned_cols=20 Identities=25% Similarity=0.343 Sum_probs=16.8
Q ss_pred CCccEEEEEEEeCCCCCCCC
Q 022157 255 PHSTQIVAKAVDTAANVQPE 274 (302)
Q Consensus 255 ~g~~~i~~RA~D~~Gn~QP~ 274 (302)
...|.+.+||.+..|...|.
T Consensus 75 ~t~Y~frV~A~n~~G~s~~S 94 (110)
T 2yuw_A 75 DAKIFVRVKAVNAAGASEPK 94 (110)
T ss_dssp TCEEEEEEEEEETTEECCCE
T ss_pred CCEEEEEEEEEcCCcCCCCc
Confidence 35689999999999987774
No 28
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=30.85 E-value=47 Score=25.44 Aligned_cols=21 Identities=10% Similarity=0.153 Sum_probs=18.1
Q ss_pred CCccEEEEEEEeCCCCCCCCC
Q 022157 255 PHSTQIVAKAVDTAANVQPES 275 (302)
Q Consensus 255 ~g~~~i~~RA~D~~Gn~QP~~ 275 (302)
...|++.++|.+..|..+|..
T Consensus 74 ~t~Y~frV~A~N~~G~s~pS~ 94 (114)
T 2kbg_A 74 TMGYEVQITAANRLGYSEPTV 94 (114)
T ss_dssp TCCEEEEEEEECTTSCEEEEE
T ss_pred CCEEEEEEEEEeCCcCcCCcC
Confidence 457899999999999998854
No 29
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=30.79 E-value=44 Score=34.10 Aligned_cols=23 Identities=26% Similarity=0.455 Sum_probs=20.7
Q ss_pred CCeEEEEEEcCCCCCcEEeEccC
Q 022157 205 RGIERVDISVDGGKNWVEASRYQ 227 (302)
Q Consensus 205 ~~I~rVEVS~DgG~tW~~A~L~~ 227 (302)
.++..+-.|+|.|+||++.++..
T Consensus 465 ~~t~~i~YS~DeG~tW~~~~f~~ 487 (685)
T 3f6k_A 465 RPINVIKFSTDEGQCWQTYTFTR 487 (685)
T ss_dssp SCBCEEEEESSTTSSCEEEECCS
T ss_pred CCcCEEEEECCCCCcccccccCC
Confidence 47888999999999999999964
No 30
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=28.75 E-value=77 Score=32.13 Aligned_cols=47 Identities=19% Similarity=0.167 Sum_probs=31.9
Q ss_pred EEEEeecCCCeecC----CcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeEcc
Q 022157 177 CVICSLEDVNVMKP----GKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRY 226 (302)
Q Consensus 177 S~I~~P~~~~~v~~----G~v~i~G~A~sggg~~I~rVEVS~DgG~tW~~A~L~ 226 (302)
..+..|.++-.+.. |++.+-.++.. .....+-.|.|+|+||+.....
T Consensus 456 ~~~~gpG~gI~l~d~~~~GrLv~p~~~~~---~~~s~i~~SdDgG~TW~~~~~~ 506 (679)
T 2sli_A 456 FLVVGPGIGKQISTGENAGRLLVPLYSKS---SAELGFMYSDDHGDNWTYVEAD 506 (679)
T ss_dssp EEEECSEECEECCSSTTTTCEEEEEEEES---SCSEEEEEESSTTSSCEEEECC
T ss_pred ceecCCCceEEecCCCCCCEEEEEEEecC---CCEEEEEEECCCCCceEeCccC
Confidence 45556655555554 77666444432 2567889999999999988754
No 31
>2cdp_A Beta-agarase 1; carbohydrate-binding module, hydrolase; HET: GAL AAL; 1.59A {Saccharophagus degradans} PDB: 2cdo_A*
Probab=28.73 E-value=1.6e+02 Score=23.77 Aligned_cols=63 Identities=17% Similarity=0.295 Sum_probs=38.0
Q ss_pred CCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEe-EccCcCCCcccccCCCCCceeeEEeEE----EEEC-CCccEEEEE
Q 022157 190 PGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEA-SRYQKTGIPYIADHMSSDKWAWVFFEV----IIDI-PHSTQIVAK 263 (302)
Q Consensus 190 ~G~v~i~G~A~sggg~~I~rVEVS~DgG~tW~~A-~L~~~~~~~~~~~~~~~~~~~W~~W~~----~~~~-~g~~~i~~R 263 (302)
+|.+.|.=.+-++. .. .+++|++|+..+|... ...-|.. .|..|.. .+.+ +|.++|...
T Consensus 78 aG~Y~i~~rvas~~-~g-~~i~l~vdg~~~~~~~g~~~vp~t-------------GW~~w~t~t~~~v~L~aG~htL~l~ 142 (160)
T 2cdp_A 78 AGNYTISYQAGSGV-TG-GSIEFLVNENGSWASKTVTAVPNQ-------------GWDNFQPLNGGSVYLSAGTHQVRLH 142 (160)
T ss_dssp CEEEEEEEEEEBSS-SS-CEEEEEEECSSSEEEEEEEECCBS-------------CTTCCEEEEEEEEEECSEEEEEEEE
T ss_pred CcEEEEEEEEEcCC-CC-ceEEEEECCCCCceeeeEEEcCCC-------------CCceeEEeeeeEEEeCCCeEEEEEE
Confidence 57666665444543 22 5899999997778553 2222211 1554443 4555 688999988
Q ss_pred EEeC
Q 022157 264 AVDT 267 (302)
Q Consensus 264 A~D~ 267 (302)
+...
T Consensus 143 ~~g~ 146 (160)
T 2cdp_A 143 GAGS 146 (160)
T ss_dssp ECSS
T ss_pred EECC
Confidence 7753
No 32
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=28.69 E-value=69 Score=31.07 Aligned_cols=20 Identities=20% Similarity=0.185 Sum_probs=16.8
Q ss_pred CeEEEEEEcCCCCCcEEeEc
Q 022157 206 GIERVDISVDGGKNWVEASR 225 (302)
Q Consensus 206 ~I~rVEVS~DgG~tW~~A~L 225 (302)
....+-.|.|+|+||+....
T Consensus 188 ~~~~~~~S~D~G~TW~~~~~ 207 (601)
T 1w8o_A 188 FQAVSVYSDDHGRTWRAGEA 207 (601)
T ss_dssp EEEEEEEESSTTSSCEECCC
T ss_pred eeEEEEEECCCCcCccCCCC
Confidence 46778899999999998764
No 33
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=28.59 E-value=77 Score=22.89 Aligned_cols=21 Identities=14% Similarity=0.178 Sum_probs=17.3
Q ss_pred CCccEEEEEEEeCCCCCCCCC
Q 022157 255 PHSTQIVAKAVDTAANVQPES 275 (302)
Q Consensus 255 ~g~~~i~~RA~D~~Gn~QP~~ 275 (302)
...|.+.+||.+..|...|..
T Consensus 76 ~t~Y~frV~A~n~~G~s~~S~ 96 (111)
T 1x5y_A 76 GARILFRVVGVNIAGRSEPAT 96 (111)
T ss_dssp TCCEEEEEEEEETTEECCCCC
T ss_pred CCEEEEEEEEEcCCcCCCCcc
Confidence 457899999999999877754
No 34
>2w20_A Sialidase A; secreted, cell WALL, hydrolase, glycosidase, neuraminidase, peptidoglycan-anchor; HET: MES; 1.49A {Streptococcus pneumoniae} PDB: 2vvz_A* 3h71_A 3h72_A* 3h73_A* 2ya8_A* 2ya5_A* 2ya6_A* 2ya7_A* 2ya4_A*
Probab=27.81 E-value=37 Score=32.57 Aligned_cols=46 Identities=22% Similarity=0.343 Sum_probs=31.3
Q ss_pred eecCCCeecC----CcEEEEEEEEeC----CCCCeEEEEEEcCCCCCcEEeEcc
Q 022157 181 SLEDVNVMKP----GKAKVSGYAVSG----GGRGIERVDISVDGGKNWVEASRY 226 (302)
Q Consensus 181 ~P~~~~~v~~----G~v~i~G~A~sg----gg~~I~rVEVS~DgG~tW~~A~L~ 226 (302)
.|..+-.++. |++.+-.++... .+.....|..|.|+|+||+.....
T Consensus 249 gpg~gI~l~d~~~~GrLv~p~~~~~~~~~~~g~~~~~v~~SdD~G~TW~~~~~v 302 (471)
T 2w20_A 249 GPGTGIVLRNGPHKGRILIPVYTTNNVSHLNGSQSSRIIYSDDHGKTWHAGEAV 302 (471)
T ss_dssp CCEECEECCSSTTTTCEEEEEEECCTTTHHHHCCEEEEEEESSTTSSCEECCCT
T ss_pred CCcceEEecCCCcCCeEEEEEEEeccccCCCCcEEEEEEEECCCCCCcccCCcc
Confidence 5555555554 777766665431 123578899999999999987654
No 35
>1pmh_X Cscbm27-1, beta-1,4-mannanase; jellyroll beta-sandwich, hydrolase; HET: MAN BMA; 1.06A {Caldicellulosiruptor saccharolyticus} SCOP: b.18.1.18 PDB: 1pmj_X
Probab=26.85 E-value=48 Score=28.29 Aligned_cols=24 Identities=13% Similarity=0.281 Sum_probs=21.5
Q ss_pred CCCeEEEEEEcCCCCCcEEeEccC
Q 022157 204 GRGIERVDISVDGGKNWVEASRYQ 227 (302)
Q Consensus 204 g~~I~rVEVS~DgG~tW~~A~L~~ 227 (302)
|.+--|++|++|++.+|.+++|.-
T Consensus 44 g~gaLklnv~~~~~~~W~e~ki~~ 67 (185)
T 1pmh_X 44 NKYALRLDVEFNPNNGWDQGDLGT 67 (185)
T ss_dssp BCCEEEEEEECCTTCSCEEEEEEE
T ss_pred CCceEEEEEecCCCCChhheeeEe
Confidence 568899999999999999999854
No 36
>2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A*
Probab=26.77 E-value=66 Score=30.36 Aligned_cols=45 Identities=27% Similarity=0.311 Sum_probs=29.7
Q ss_pred eecCCCeecC----CcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeEc
Q 022157 181 SLEDVNVMKP----GKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASR 225 (302)
Q Consensus 181 ~P~~~~~v~~----G~v~i~G~A~sggg~~I~rVEVS~DgG~tW~~A~L 225 (302)
.|..|-.+.. |++.+--++....+.....|-.|.|+|+||+....
T Consensus 222 ~~g~Gi~l~~g~~~Grlv~p~~~~~~~g~~~~~v~~S~D~G~tW~~~~~ 270 (449)
T 2bf6_A 222 APGRGIQIKNGEHKGRIVVPVYYTNEKGKQSSAVIYSDDSGKNWTIGES 270 (449)
T ss_dssp CSEECEECCSSTTTTCEEEEEEEECTTCCEEEEEEEESSTTSSCEECCC
T ss_pred cCCeEEEeccCCcCCEEEEEEEEEcCCCCEEEEEEEECCCCCceeECCc
Confidence 3444444443 66665555554334457789999999999998765
No 37
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=26.26 E-value=2.4e+02 Score=24.70 Aligned_cols=16 Identities=31% Similarity=0.592 Sum_probs=13.7
Q ss_pred EEEEcCCCCCcEEeEc
Q 022157 210 VDISVDGGKNWVEASR 225 (302)
Q Consensus 210 VEVS~DgG~tW~~A~L 225 (302)
|-.|.|+|+||+....
T Consensus 144 v~~S~DgG~tW~~~~~ 159 (327)
T 2xbg_A 144 IYRTKDSGKNWQALVQ 159 (327)
T ss_dssp EEEESSTTSSEEEEEC
T ss_pred EEEEcCCCCCCEEeec
Confidence 5679999999998865
No 38
>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3
Probab=26.07 E-value=95 Score=27.34 Aligned_cols=54 Identities=15% Similarity=0.304 Sum_probs=33.1
Q ss_pred EEeCCCCCeEEEEEEcCCCCCcEEeEccCcCCCcccccCCCCCceeeEEeEEEEE--CCCccEEEEEEEeCCCCC
Q 022157 199 AVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIID--IPHSTQIVAKAVDTAANV 271 (302)
Q Consensus 199 A~sggg~~I~rVEVS~DgG~tW~~A~L~~~~~~~~~~~~~~~~~~~W~~W~~~~~--~~g~~~i~~RA~D~~Gn~ 271 (302)
...++.-.|++|||.-++...|+.-... .+ ..|++.-. +.| -|..|-|+.+|.+
T Consensus 166 ~n~~g~g~V~~V~ik~~~~~~W~~m~r~--wG---------------~~W~~~~~~~l~g--pls~RvT~~~G~~ 221 (241)
T 1n10_A 166 KYVNGDGDVVAVDIKEKGKDKWIELKES--WG---------------AIWRIDTPDKLTG--PFTVRYTTEGGTK 221 (241)
T ss_dssp ECCCCSSCEEEEEEEETTCCCCEECBCC--TT---------------TCEEEECSSCCCS--CEEEEEEESSSCE
T ss_pred EecCCCCCEEEEEEEeCCCCCeEECccC--cC---------------cEEEeCCCCCCCC--CEEEEEEEeCCcE
Confidence 3333333799999999987799865432 12 14555443 234 4677777777753
No 39
>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ...
Probab=25.88 E-value=1.6e+02 Score=29.87 Aligned_cols=18 Identities=39% Similarity=0.490 Sum_probs=15.1
Q ss_pred EEEEEEcCCCCCcEEeEc
Q 022157 208 ERVDISVDGGKNWVEASR 225 (302)
Q Consensus 208 ~rVEVS~DgG~tW~~A~L 225 (302)
.+|=.|.|+|+||+++..
T Consensus 265 R~Vy~S~D~G~TWte~~~ 282 (648)
T 1ms9_A 265 RLVYESSDMGNTWLEAVG 282 (648)
T ss_dssp CCEEEESSTTSSCEECTT
T ss_pred EEEEEecCCCcccccccc
Confidence 346689999999999975
No 40
>2uur_A Collagen alpha-1(IX) chain; glycoprotein, hydroxylation, structural protein, NC4, collagen IX, polymorphism, extracellular matrix; 1.8A {Homo sapiens}
Probab=23.42 E-value=88 Score=27.38 Aligned_cols=41 Identities=15% Similarity=0.414 Sum_probs=29.3
Q ss_pred CccEEEEEEEeCCCCCCCCCccccccc-ccCCCCceEEEEEEEeec
Q 022157 256 HSTQIVAKAVDTAANVQPESVETIWNL-RGVLNTSWHRVQVRVGHS 300 (302)
Q Consensus 256 g~~~i~~RA~D~~Gn~QP~~~~~~wN~-~G~~~n~~h~v~v~v~~~ 300 (302)
+..+|.-..+|..|..|+.. ++. .-.....||+|.|.|..+
T Consensus 126 ~~~~l~~~y~~~~g~~q~v~----F~~~~~L~Dg~WHklalsV~~~ 167 (245)
T 2uur_A 126 QTQSVVFSYKGLDGSLQTAA----FSNLSSLFDSQWHKIMIGVERS 167 (245)
T ss_dssp GGTEEEEEEEBTTSCEEEEE----ECCCGGGCSSSCEEEEEEEETT
T ss_pred CCCEEEEEecCCCCCeeEEE----ecCCccccCCCEEEEEEEEECC
Confidence 34577888889999888732 322 225568899999999764
No 41
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=23.36 E-value=1.8e+02 Score=21.76 Aligned_cols=73 Identities=7% Similarity=-0.055 Sum_probs=43.1
Q ss_pred EeecCCCeecCC--cEEEEEEEEeCCCC-CeEEEEEEcCCCCCcEE------eEccC--cCCCcccccCCCCCceeeEEe
Q 022157 180 CSLEDVNVMKPG--KAKVSGYAVSGGGR-GIERVDISVDGGKNWVE------ASRYQ--KTGIPYIADHMSSDKWAWVFF 248 (302)
Q Consensus 180 ~~P~~~~~v~~G--~v~i~G~A~sggg~-~I~rVEVS~DgG~tW~~------A~L~~--~~~~~~~~~~~~~~~~~W~~W 248 (302)
..|.+|++| .. .|+|+ |+..-. ...+|.|.-.+|+.|.. .+... ..+ +..
T Consensus 7 s~Pa~ga~v-~aP~~v~L~---Fse~v~~~~s~v~v~~~~g~~v~~~~~~~~~~~~~~~~~~---------------~~~ 67 (102)
T 2c9r_A 7 STPAEGSEG-AAPAKIELH---FSENLVTQFSGAKLVMTAMPGMEHSPMAVKAAVSGGGDPK---------------TMV 67 (102)
T ss_dssp EESCTTCEE-SCCSCEEEE---ESSCCCGGGCEEEEEEEECC-----CEEECEEEEECSSTT---------------EEE
T ss_pred cCCCCcCEE-CCCCEEEEE---eCCCCccCccEEEEECCCCCeeeeccccccccceecCCCC---------------cEE
Confidence 569999998 54 46653 664221 23678887777888876 43321 111 234
Q ss_pred EEEEEC--CCccEEEEEEEeCCCCC
Q 022157 249 EVIIDI--PHSTQIVAKAVDTAANV 271 (302)
Q Consensus 249 ~~~~~~--~g~~~i~~RA~D~~Gn~ 271 (302)
.+.++. +|.|+|.=|++..+|..
T Consensus 68 ~~~l~~L~~G~YtV~WrvvS~DGH~ 92 (102)
T 2c9r_A 68 ITPASPLTAGTYKVDWRAVSSDTFP 92 (102)
T ss_dssp EEESSCCCSEEEEEEEEECCTTCCC
T ss_pred EEECCCCCCceEEEEEEEEecCCCc
Confidence 444433 68899999999998864
No 42
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=23.29 E-value=86 Score=23.35 Aligned_cols=20 Identities=15% Similarity=0.154 Sum_probs=16.2
Q ss_pred CCccEEEEEEEeCCCC-CCCC
Q 022157 255 PHSTQIVAKAVDTAAN-VQPE 274 (302)
Q Consensus 255 ~g~~~i~~RA~D~~Gn-~QP~ 274 (302)
...|.+.+||.+..|. ..|.
T Consensus 78 ~t~Y~frV~A~N~~G~~s~~S 98 (112)
T 1bpv_A 78 DAAYEFRVIAKNAAGAISPPS 98 (112)
T ss_dssp SCCEEEEEEEECTTSCEEEEE
T ss_pred CCEEEEEEEEEECCCCCCCCC
Confidence 3568999999999997 6553
Done!