BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022161
(301 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|76262827|gb|ABA41488.1| ATP-dependent Clp protease proteolytic subunit [Carica papaya]
Length = 306
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/274 (75%), Positives = 236/274 (86%), Gaps = 6/274 (2%)
Query: 25 ESHSSSLRFSPLRLRKMIVSSNRERKCEKFGVKAAYTSDYSSLDDCESTWKGIWSIRNDL 84
ES S L PLR RK+ + ++K KA YTS+ L ES+ +GIWSIR+DL
Sbjct: 30 ESQSLCLPLEPLRSRKLKKLVSNQKKVRNSTAKAVYTSN---LRMPESSHQGIWSIRDDL 86
Query: 85 EVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
++PSSPY P YAQG+ GPPPM+ RFQ+V+SQLFQHRIIRCGG V+DDMANIIVAQLL
Sbjct: 87 QIPSSPYFPAYAQGQ---GPPPMVQERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLL 143
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
YLDAVDPNKDI+MY+NSPGGSVTAGMA+FDT+RHIRPDVSTVCVGLAASMGAFLLSAGTK
Sbjct: 144 YLDAVDPNKDIVMYVNSPGGSVTAGMAVFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTK 203
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKRYSLPNSRIMIHQPLGGAQGGQ+DID+QANEMLHHKANLN YL+YHTGQ+LE+IN+DT
Sbjct: 204 GKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNSYLAYHTGQSLERINQDT 263
Query: 265 DRDFFMSAEEAKDYGLIDGVVMNPHKILQPVAAA 298
DRDFFMSA+EAK+YGLIDGV+MNP K LQP+ A+
Sbjct: 264 DRDFFMSAKEAKEYGLIDGVIMNPLKALQPLTAS 297
>gi|224068558|ref|XP_002302770.1| predicted protein [Populus trichocarpa]
gi|222844496|gb|EEE82043.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/272 (75%), Positives = 235/272 (86%), Gaps = 2/272 (0%)
Query: 30 SLRFSPLRLRKMIVSSNRERKCEKFGVKAAYTSDYSSLDDCESTWKGIWSIRNDLEVPSS 89
S F LR K+ + + + VKA Y+ ++ + + S +GIWS+R DL++PSS
Sbjct: 30 SFPFHHLRYSKLRELGSDRKAIQTSSVKAVYSGEFWAPE--RSLRQGIWSMREDLQIPSS 87
Query: 90 PYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAV 149
P+ P YA G QG GPPPM+ RFQ+V+SQLFQHRIIRCGG V+DDMANIIVAQLLYLDAV
Sbjct: 88 PFFPAYANGAQGQGPPPMVHERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAV 147
Query: 150 DPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS 209
DPNKDI+MY+NSPGGSVTAGMAIFDT+RHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS
Sbjct: 148 DPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS 207
Query: 210 LPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFF 269
LPNSRIMIHQPLGGAQGGQSDID+QANEMLHHKANLNGYL+YHTGQ+LEKIN+DTDRD+F
Sbjct: 208 LPNSRIMIHQPLGGAQGGQSDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDYF 267
Query: 270 MSAEEAKDYGLIDGVVMNPHKILQPVAAAAGQ 301
MSA+EAKDYGLIDGV++NP K+LQP+AAAA Q
Sbjct: 268 MSAKEAKDYGLIDGVILNPLKVLQPLAAAADQ 299
>gi|255548433|ref|XP_002515273.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223545753|gb|EEF47257.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 305
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/276 (74%), Positives = 237/276 (85%), Gaps = 3/276 (1%)
Query: 25 ESHSSSLRFSPLRLRKMIVSSNRERKCEKFGVKAAYTSDYSSLDDCESTWKGIWSIRNDL 84
+SH SL F PLR RK S+ + + KA Y+ + + + +++ +GIWSIR+DL
Sbjct: 29 DSHKLSLPFEPLRSRKFRKLSSIRKNSQPSSAKAVYSGQFWAPE--KTSRQGIWSIRDDL 86
Query: 85 EVPSSPYIPTYAQGE-QGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQL 143
E+PSSPY P YA G+ Q GPPPM+ RFQ+V+SQLFQ+RIIRCGG V+DDMANIIVAQL
Sbjct: 87 EIPSSPYFPAYANGQGQAQGPPPMVHERFQSVISQLFQYRIIRCGGAVDDDMANIIVAQL 146
Query: 144 LYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGT 203
LYLDAVDPNKDI+MY+NSPGGSVTAGMAIFDT+RHIRPDVSTVCVGLAASMGAFLLSAGT
Sbjct: 147 LYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGT 206
Query: 204 KGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINED 263
KGKRYSLPNSRIMIHQPLGGAQGGQSDID+QANEMLHHKANLNGYL+YHTGQ+LEKIN+D
Sbjct: 207 KGKRYSLPNSRIMIHQPLGGAQGGQSDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQD 266
Query: 264 TDRDFFMSAEEAKDYGLIDGVVMNPHKILQPVAAAA 299
TDRD+FMSA+EA DYGLIDGV+ NP K QP+AAAA
Sbjct: 267 TDRDYFMSAKEATDYGLIDGVITNPLKAFQPLAAAA 302
>gi|449469024|ref|XP_004152221.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 5,
chloroplastic-like [Cucumis sativus]
Length = 306
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/269 (75%), Positives = 232/269 (86%), Gaps = 5/269 (1%)
Query: 31 LRFSPLRLRKMIVSSNRERKCEKFGVKAAYTSDYSSLDDCESTWKGIWSIRNDLEVPSSP 90
L P RK+ R + + VKA Y+ ++SS+D ++ +GIWSIR+D++VPSS
Sbjct: 35 LPLEPFHSRKLGKLVGGGRNLKNYPVKAMYSGEFSSMDG--NSRQGIWSIRDDVQVPSSL 92
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
Y PTYAQG+ GPPPM+ RFQ+V+SQLFQ+RIIRCGGPVEDDMANIIVAQLLYLDAVD
Sbjct: 93 YFPTYAQGQ---GPPPMVQERFQSVISQLFQYRIIRCGGPVEDDMANIIVAQLLYLDAVD 149
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
PNKDI+MY+NSPGGSVTAGMAIFDT++HIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL
Sbjct: 150 PNKDIVMYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 209
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
PNSRIMIHQPLGGAQG Q+DID+QANEMLHHKANLNGYLSYHTGQ+LEKINEDTDRDFFM
Sbjct: 210 PNSRIMIHQPLGGAQGTQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINEDTDRDFFM 269
Query: 271 SAEEAKDYGLIDGVVMNPHKILQPVAAAA 299
S +EA DYGLIDGV+MNP K LQP+A A
Sbjct: 270 SPKEAIDYGLIDGVIMNPLKALQPLAPTA 298
>gi|449484212|ref|XP_004156818.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 5,
chloroplastic-like [Cucumis sativus]
Length = 306
Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/269 (75%), Positives = 232/269 (86%), Gaps = 5/269 (1%)
Query: 31 LRFSPLRLRKMIVSSNRERKCEKFGVKAAYTSDYSSLDDCESTWKGIWSIRNDLEVPSSP 90
L P RK+ R + + VKA Y+ ++SS+D ++ +GIWSIR+D++VPSS
Sbjct: 35 LPLEPFHSRKLGKLVGGGRNLKNYPVKAMYSGEFSSMD--VNSRQGIWSIRDDVQVPSSL 92
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
Y PTYAQG+ GPPPM+ RFQ+V+SQLFQ+RIIRCGGPVEDDMANIIVAQLLYLDAVD
Sbjct: 93 YFPTYAQGQ---GPPPMVQERFQSVISQLFQYRIIRCGGPVEDDMANIIVAQLLYLDAVD 149
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
PNKDI+MY+NSPGGSVTAGMAIFDT++HIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL
Sbjct: 150 PNKDIVMYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 209
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
PNSRIMIHQPLGGAQG Q+DID+QANEMLHHKANLNGYLSYHTGQ+LEKINEDTDRDFFM
Sbjct: 210 PNSRIMIHQPLGGAQGTQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINEDTDRDFFM 269
Query: 271 SAEEAKDYGLIDGVVMNPHKILQPVAAAA 299
S +EA DYGLIDGV+MNP K LQP+A A
Sbjct: 270 SPKEAIDYGLIDGVIMNPLKALQPLAPTA 298
>gi|297843050|ref|XP_002889406.1| hypothetical protein ARALYDRAFT_887394 [Arabidopsis lyrata subsp.
lyrata]
gi|297335248|gb|EFH65665.1| hypothetical protein ARALYDRAFT_887394 [Arabidopsis lyrata subsp.
lyrata]
Length = 298
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/303 (69%), Positives = 246/303 (81%), Gaps = 10/303 (3%)
Query: 1 MAQSCAAALSSTAIFAA-FCNHFPA----ESHSSSLRFSPLRLRKMIVSSNRERKCEKFG 55
MA +C + +S+ F A F + P +S SL F PLR RK + + +
Sbjct: 1 MAHACVSTSASSLRFTAGFVSASPNGSSFDSPKLSLPFEPLRSRKTKKLVSDRKNWKNST 60
Query: 56 VKAAYTSDYSSLDDCESTWKGIWSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNV 115
KA Y+ + + + +G+WSIR+DL+VPSSPY P YAQG+ GPPPM+ RFQ++
Sbjct: 61 PKAVYSGNLWTPEIPSP--QGVWSIRDDLQVPSSPYFPVYAQGQ---GPPPMVQERFQSI 115
Query: 116 LSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDT 175
+SQLFQ+RIIRCGG V+DDMANIIVAQLLYLDAVDP KDI+MY+NSPGGSVTAGMAIFDT
Sbjct: 116 ISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDT 175
Query: 176 IRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQA 235
+RHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQ+DID+QA
Sbjct: 176 MRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQA 235
Query: 236 NEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQPV 295
NEMLHHKANLNGYL+YHTGQ+LEKIN+DTDRDFFMSA+EAK+YGLIDGV+MNP K LQP+
Sbjct: 236 NEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPL 295
Query: 296 AAA 298
AAA
Sbjct: 296 AAA 298
>gi|15485610|emb|CAC67407.1| Clp protease 2 proteolytic subunit [Solanum lycopersicum]
Length = 299
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/307 (69%), Positives = 248/307 (80%), Gaps = 15/307 (4%)
Query: 1 MAQSCAAALSS-----TAIFAA-FCNHFPAESHSSSLRFSPLRLRKMIVSSNRERKCEKF 54
MA SC A SS +AIF + +CN P SL+F L LRK + + + +
Sbjct: 1 MAHSCIATTSSLSKYNSAIFPSDYCNISPI-----SLQFKRLSLRK-VKAVGKVKSRGNS 54
Query: 55 GVKAAYTSDYSSLDDCESTWKGIWSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQN 114
VKA Y+ L + GIWSIR+D+++PSSPY PTYA QG GPPPM+ RFQ+
Sbjct: 55 TVKAVYSGGDWDLAKASRS-SGIWSIRDDVQIPSSPYFPTYA--AQGQGPPPMVQERFQS 111
Query: 115 VLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFD 174
V+SQLFQ+RIIRCGG V+DDMAN+IVAQLLYLDAVDP KDI+MY+NSPGGSVTAGMA+FD
Sbjct: 112 VISQLFQYRIIRCGGAVDDDMANVIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAVFD 171
Query: 175 TIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQ 234
T+RHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDI++Q
Sbjct: 172 TMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIEIQ 231
Query: 235 ANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQP 294
ANEMLHHKANLNGYL+Y TGQ+L++IN+DTDRDFFMSA+EAK+YGLIDGV+MNP K LQP
Sbjct: 232 ANEMLHHKANLNGYLAYQTGQSLDRINQDTDRDFFMSAKEAKEYGLIDGVIMNPMKALQP 291
Query: 295 VAAAAGQ 301
+AAAA Q
Sbjct: 292 LAAAAEQ 298
>gi|18378982|ref|NP_563657.1| ATP-dependent Clp protease, protease subunit [Arabidopsis thaliana]
gi|75313059|sp|Q9S834.1|CLPP5_ARATH RecName: Full=ATP-dependent Clp protease proteolytic subunit 5,
chloroplastic; AltName: Full=Endopeptidase ClpP5;
Short=nClpP5; AltName: Full=nClpP1; Flags: Precursor
gi|9972387|gb|AAG10637.1|AC022521_15 ATP-dependent Clp protease subunit ClpP [Arabidopsis thaliana]
gi|4887543|emb|CAB43488.1| ATP-dependent Clp protease subunit ClpP [Arabidopsis thaliana]
gi|5360579|dbj|BAA82065.1| nClpP1 [Arabidopsis thaliana]
gi|21536639|gb|AAM60971.1| ATP-dependent Clp protease proteolytic subunit ClpP5 [Arabidopsis
thaliana]
gi|89274139|gb|ABD65590.1| At1g02560 [Arabidopsis thaliana]
gi|332189323|gb|AEE27444.1| ATP-dependent Clp protease, protease subunit [Arabidopsis thaliana]
Length = 298
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/303 (69%), Positives = 246/303 (81%), Gaps = 10/303 (3%)
Query: 1 MAQSCAAALSSTAIFAA-FCNHFPA----ESHSSSLRFSPLRLRKMIVSSNRERKCEKFG 55
MA +C + +S+ F A F + P +S SL F PLR RK + + +
Sbjct: 1 MAHACVSTSASSLRFTAGFVSASPNGSSFDSPKLSLPFEPLRSRKTNKLVSDRKNWKNST 60
Query: 56 VKAAYTSDYSSLDDCESTWKGIWSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNV 115
KA Y+ + + + +G+WSIR+DL+VPSSPY P YAQG+ GPPPM+ RFQ++
Sbjct: 61 PKAVYSGNLWTPEIPSP--QGVWSIRDDLQVPSSPYFPAYAQGQ---GPPPMVQERFQSI 115
Query: 116 LSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDT 175
+SQLFQ+RIIRCGG V+DDMANIIVAQLLYLDAVDP KDI+MY+NSPGGSVTAGMAIFDT
Sbjct: 116 ISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDT 175
Query: 176 IRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQA 235
+RHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQ+DID+QA
Sbjct: 176 MRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQA 235
Query: 236 NEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQPV 295
NEMLHHKANLNGYL+YHTGQ+LEKIN+DTDRDFFMSA+EAK+YGLIDGV+MNP K LQP+
Sbjct: 236 NEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPL 295
Query: 296 AAA 298
AAA
Sbjct: 296 AAA 298
>gi|363806660|ref|NP_001242516.1| uncharacterized protein LOC100798621 [Glycine max]
gi|255645951|gb|ACU23464.1| unknown [Glycine max]
Length = 304
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/263 (77%), Positives = 233/263 (88%), Gaps = 6/263 (2%)
Query: 38 LRKMIVSSNRERKC-EKFGVKAAYTSDYSSLDDCESTWKGIWSIRNDLEVPSSPYIPTYA 96
L + + S +RK +K VKA Y ++ + + S+ GIWSIR+DL+VPSSPY PTYA
Sbjct: 39 LSRNLRKSVEDRKINKKSAVKAVYGDEFWTPE--RSSRPGIWSIRSDLQVPSSPYFPTYA 96
Query: 97 QGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDII 156
QG+ GPPPM+ RFQ+V+SQLFQ+RIIRCGG V+DDMANIIVAQLLYLDAVDPNKDI+
Sbjct: 97 QGQ---GPPPMVAERFQSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIV 153
Query: 157 MYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIM 216
MY+NSPGGSVTAGMAIFDT+RHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIM
Sbjct: 154 MYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIM 213
Query: 217 IHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAK 276
IHQPLGGAQGGQ+DID+QANEMLHHKANLNGYL+YHTGQ+L+KIN+DTDRDFFMSA+EAK
Sbjct: 214 IHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLDKINQDTDRDFFMSAKEAK 273
Query: 277 DYGLIDGVVMNPHKILQPVAAAA 299
+YGLIDGV+MNP K LQP+ AAA
Sbjct: 274 EYGLIDGVIMNPLKALQPLEAAA 296
>gi|225437581|ref|XP_002277104.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 5,
chloroplastic isoform 1 [Vitis vinifera]
gi|297743987|emb|CBI36957.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/271 (74%), Positives = 235/271 (86%), Gaps = 7/271 (2%)
Query: 31 LRFSPLRLRKMIVSSNRERKCEKFGVKAAYTSDYSSLDDCESTWKGIWSIRNDLEVPSSP 90
L FS + K++ S R R VKAAY+ ++ + D +++ +G WSIR+DL++PSS
Sbjct: 26 LSFSSRKFTKLVGSEKRLRVAP---VKAAYSGEFWAPD--KNSRQGTWSIRDDLQIPSSA 80
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
Y PTYAQG G GPPPM+ RFQ+V+SQLFQHRIIRCGG V+DDMANIIVAQLLYLDAVD
Sbjct: 81 YFPTYAQG--GQGPPPMVQERFQSVVSQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVD 138
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P+KDI+MY+NSPGGSVTAGMAIFDT+RHIRPDVSTVCVGLAASMGAFLLS GTKGKRYSL
Sbjct: 139 PDKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSCGTKGKRYSL 198
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
PNSRIMIHQPLGGAQGGQ+DID+QANEMLHHKANLNGYLSYHTGQ+LEKIN+DTDRDFFM
Sbjct: 199 PNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFM 258
Query: 271 SAEEAKDYGLIDGVVMNPHKILQPVAAAAGQ 301
SA+EAK+YGLIDGV++NP K L+P+ A A Q
Sbjct: 259 SAKEAKEYGLIDGVILNPLKALKPLVATADQ 289
>gi|357511379|ref|XP_003625978.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
gi|355500993|gb|AES82196.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
Length = 301
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/279 (72%), Positives = 234/279 (83%), Gaps = 5/279 (1%)
Query: 23 PAESHSSSLRF-SPL-RLRKMIVSSNRERKCEKFGVKAAYTSDYSSLDDCESTWKGIWSI 80
P SHS +L F SP R + S + KA Y +D+ + + ++ GIWSI
Sbjct: 18 PTSSHSHTLSFASPSSRFSSNLGGSRNVTQKSYLKAKAVYVNDFLASEAEKNLIHGIWSI 77
Query: 81 RNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIV 140
R DL+VPSSPY P +AQG+ GPPPM+ RFQ+V+SQLFQ+RIIRCGGPV+DDMANIIV
Sbjct: 78 REDLQVPSSPYFPVHAQGQ---GPPPMVQERFQSVISQLFQYRIIRCGGPVDDDMANIIV 134
Query: 141 AQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLS 200
+QLLYLDAVDP+KDI+MY+NSPGGSVTAGMAIFDT+RHIRPDVSTVCVGLAASMGAFLLS
Sbjct: 135 SQLLYLDAVDPSKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLS 194
Query: 201 AGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKI 260
AGTKGKRYSLPNSRIMIHQPLGG QGGQ+DID+QANEMLHHKANLNGYLSY TGQ+LEKI
Sbjct: 195 AGTKGKRYSLPNSRIMIHQPLGGFQGGQTDIDIQANEMLHHKANLNGYLSYQTGQSLEKI 254
Query: 261 NEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQPVAAAA 299
N+DTDRDFFMSA+EAK+YGLIDGV+ NP K LQP+A+AA
Sbjct: 255 NQDTDRDFFMSAKEAKEYGLIDGVITNPLKALQPLASAA 293
>gi|356534756|ref|XP_003535918.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 5,
chloroplastic-like isoform 1 [Glycine max]
Length = 303
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/263 (77%), Positives = 231/263 (87%), Gaps = 6/263 (2%)
Query: 38 LRKMIVSSNRERKCEK-FGVKAAYTSDYSSLDDCESTWKGIWSIRNDLEVPSSPYIPTYA 96
L + I S +RK K VKA Y ++ + S+ + IWSIR+DL+VPSSPY PTYA
Sbjct: 38 LSRNIRKSVEDRKINKNSAVKAVYGDEFWT--PARSSPQDIWSIRSDLQVPSSPYFPTYA 95
Query: 97 QGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDII 156
QG+ GPPPM+ RFQ+V+SQLFQ+RIIRCGG V+DDMANIIVAQLLYLDAVDPNKDI+
Sbjct: 96 QGQ---GPPPMVAERFQSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIV 152
Query: 157 MYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIM 216
MY+NSPGGSVTAGMAIFDT+RHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIM
Sbjct: 153 MYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIM 212
Query: 217 IHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAK 276
IHQPLGGAQGGQ+DID+QANEMLHHKANLNGYL+YHTGQ+L+KIN+DTDRDFFMSA+EAK
Sbjct: 213 IHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLDKINQDTDRDFFMSAKEAK 272
Query: 277 DYGLIDGVVMNPHKILQPVAAAA 299
+YGLIDGV+MNP K LQP+ AAA
Sbjct: 273 EYGLIDGVIMNPLKALQPLEAAA 295
>gi|357442229|ref|XP_003591392.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
gi|355480440|gb|AES61643.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
Length = 304
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/262 (75%), Positives = 225/262 (85%), Gaps = 8/262 (3%)
Query: 37 RLRKMIVSSNRERKCEKFGVKAAYTSDYSSLDDCESTWKGIWSIRNDLEVPSSPYIPTYA 96
+LRK + RK VKA Y + + S+ +GIWSIR DL VPSSPY PTYA
Sbjct: 42 KLRKPVEFRKITRKS---AVKAVYGDQFWGHE--RSSRQGIWSIREDLGVPSSPYFPTYA 96
Query: 97 QGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDII 156
QG+ GPPPM+ RFQ+V+SQLFQ+RIIRCGG V+DDMANIIV+QLLYLDAVDPNKDI+
Sbjct: 97 QGQ---GPPPMVQERFQSVISQLFQYRIIRCGGAVDDDMANIIVSQLLYLDAVDPNKDIV 153
Query: 157 MYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIM 216
MY+NSPGGSVTAGMAIFDT++HIRPDVSTVCVGLAASMGAFLLSAGTKGKR+SLPNSRIM
Sbjct: 154 MYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGTKGKRFSLPNSRIM 213
Query: 217 IHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAK 276
IHQPLGG QGGQ+DID+QANEMLHHKANLNGYLSY TGQ+LEKIN+DTDRDFFMSA+EAK
Sbjct: 214 IHQPLGGFQGGQTDIDIQANEMLHHKANLNGYLSYQTGQSLEKINQDTDRDFFMSAKEAK 273
Query: 277 DYGLIDGVVMNPHKILQPVAAA 298
+YGLIDGV+MNP K LQP+A A
Sbjct: 274 EYGLIDGVIMNPLKALQPLATA 295
>gi|195640846|gb|ACG39891.1| ATP-dependent Clp protease proteolytic subunit 1 [Zea mays]
gi|413955932|gb|AFW88581.1| ATP-dependent Clp protease proteolytic subunit isoform 1 [Zea mays]
gi|413955933|gb|AFW88582.1| ATP-dependent Clp protease proteolytic subunit isoform 2 [Zea mays]
Length = 281
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 181/225 (80%), Positives = 207/225 (92%)
Query: 75 KGIWSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDD 134
+GIWSIR+DL VP SPY P + Q GP PM++ RFQ+V+SQLFQHRIIRCGGPVEDD
Sbjct: 57 RGIWSIRDDLVVPRSPYFPVESAAGQERGPSPMVMERFQSVVSQLFQHRIIRCGGPVEDD 116
Query: 135 MANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASM 194
MANIIVAQLLYLDA+DPNKDIIMY+NSPGGSVTAGMAIFDT++HIRPDVSTVC+GLAASM
Sbjct: 117 MANIIVAQLLYLDAIDPNKDIIMYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASM 176
Query: 195 GAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTG 254
GAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQG ++D+++QANEMLHHKANLNGYL+YHTG
Sbjct: 177 GAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGQETDLEIQANEMLHHKANLNGYLAYHTG 236
Query: 255 QTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQPVAAAA 299
Q L+KIN DTDRD+FMSA+EAK+YGLIDGV+MNP K LQP+ A++
Sbjct: 237 QPLDKINVDTDRDYFMSAKEAKEYGLIDGVIMNPLKALQPLPASS 281
>gi|242035957|ref|XP_002465373.1| hypothetical protein SORBIDRAFT_01g037430 [Sorghum bicolor]
gi|241919227|gb|EER92371.1| hypothetical protein SORBIDRAFT_01g037430 [Sorghum bicolor]
Length = 283
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/253 (73%), Positives = 216/253 (85%), Gaps = 3/253 (1%)
Query: 47 RERKCEKFGVKAAYTSDYSSLDDCESTWKGIWSIRNDLEVPSSPYIPTYAQGEQGGGPPP 106
R R+C + V AA + + +GIWSIR+DL VP SPY P + Q GP P
Sbjct: 34 RSRRCAR-AVTAAVAG--GPVPYGAAPRRGIWSIRDDLVVPRSPYFPVESAAGQERGPSP 90
Query: 107 MLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSV 166
M++ RFQ+V+SQLFQHRIIRCGGPVEDDMANIIVAQLLYLDA+DP KDIIMY+NSPGGSV
Sbjct: 91 MVMERFQSVVSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAIDPTKDIIMYVNSPGGSV 150
Query: 167 TAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQG 226
TAGMAIFDT++HIRPDVSTVC+GLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQG
Sbjct: 151 TAGMAIFDTMKHIRPDVSTVCIGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQG 210
Query: 227 GQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVM 286
++D+++QANEMLHHKANLNGYL+YHTGQ L+KIN DTDRD+FMSA+EAK+YGLIDGV+M
Sbjct: 211 QETDLEIQANEMLHHKANLNGYLAYHTGQPLDKINVDTDRDYFMSAKEAKEYGLIDGVIM 270
Query: 287 NPHKILQPVAAAA 299
NP K LQP+ A++
Sbjct: 271 NPLKALQPLPASS 283
>gi|222624791|gb|EEE58923.1| hypothetical protein OsJ_10573 [Oryza sativa Japonica Group]
Length = 282
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/225 (81%), Positives = 209/225 (92%), Gaps = 2/225 (0%)
Query: 76 GIWSIRNDLEVPSSPYIPT-YAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDD 134
GIWSIR+DL VP SPY P YA G++ G P PM++ RFQ+V+SQLFQHRIIRCGGPVEDD
Sbjct: 59 GIWSIRDDLVVPRSPYFPVEYASGQERG-PSPMVMERFQSVVSQLFQHRIIRCGGPVEDD 117
Query: 135 MANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASM 194
MANIIVAQLLYLDA+DPNKDIIMY+NSPGGSVTAGMAIFDT++HIRPDVSTVC+GLAASM
Sbjct: 118 MANIIVAQLLYLDAIDPNKDIIMYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASM 177
Query: 195 GAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTG 254
GAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQG ++D+++QANEMLHHKANLNGYL+YHTG
Sbjct: 178 GAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGQETDLEIQANEMLHHKANLNGYLAYHTG 237
Query: 255 QTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQPVAAAA 299
Q L+KIN DTDRD+FMSA+EAK+YGLIDGV+MNP K LQP+ A++
Sbjct: 238 QPLDKINVDTDRDYFMSAKEAKEYGLIDGVIMNPLKALQPLPASS 282
>gi|297600816|ref|NP_001049902.2| Os03g0308100 [Oryza sativa Japonica Group]
gi|63003513|dbj|BAD98161.1| ATP-dependent protease [Oryza sativa Japonica Group]
gi|108707751|gb|ABF95546.1| ATP-dependent Clp protease proteolytic subunit 1, putative,
expressed [Oryza sativa Japonica Group]
gi|215740983|dbj|BAG97478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765780|dbj|BAG87477.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255674452|dbj|BAF11816.2| Os03g0308100 [Oryza sativa Japonica Group]
Length = 282
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/225 (81%), Positives = 209/225 (92%), Gaps = 2/225 (0%)
Query: 76 GIWSIRNDLEVPSSPYIPT-YAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDD 134
GIWSIR+DL VP SPY P YA G++ G P PM++ RFQ+V+SQLFQHRIIRCGGPVEDD
Sbjct: 59 GIWSIRDDLVVPRSPYFPVEYASGQERG-PSPMVMERFQSVVSQLFQHRIIRCGGPVEDD 117
Query: 135 MANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASM 194
MANIIVAQLLYLDA+DPNKDIIMY+NSPGGSVTAGMAIFDT++HIRPDVSTVC+GLAASM
Sbjct: 118 MANIIVAQLLYLDAIDPNKDIIMYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASM 177
Query: 195 GAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTG 254
GAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQG ++D+++QANEMLHHKANLNGYL+YHTG
Sbjct: 178 GAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGQETDLEIQANEMLHHKANLNGYLAYHTG 237
Query: 255 QTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQPVAAAA 299
Q L+KIN DTDRD+FMSA+EAK+YGLIDGV+MNP K LQP+ A++
Sbjct: 238 QPLDKINVDTDRDYFMSAKEAKEYGLIDGVIMNPLKALQPLPASS 282
>gi|223973663|gb|ACN31019.1| unknown [Zea mays]
Length = 280
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/225 (80%), Positives = 206/225 (91%)
Query: 75 KGIWSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDD 134
+GIWSIR+DL VP SPY P + Q GP PM++ RFQ+V+SQLFQHRIIRCGGPVEDD
Sbjct: 56 RGIWSIRDDLVVPRSPYFPVDSAAGQERGPSPMVMERFQSVVSQLFQHRIIRCGGPVEDD 115
Query: 135 MANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASM 194
MANIIVAQLLYLDA+DP KDIIMY+NSPGGSVTAGMAIFDT++HIRPDVSTVC+GLAASM
Sbjct: 116 MANIIVAQLLYLDAIDPTKDIIMYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASM 175
Query: 195 GAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTG 254
GAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQG ++D+++QANEMLHHKANLNGYL+YHTG
Sbjct: 176 GAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGQETDLEIQANEMLHHKANLNGYLAYHTG 235
Query: 255 QTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQPVAAAA 299
Q L+KIN DTDRD+FMSA+EAK+YGLIDGV+MNP K LQP+ A++
Sbjct: 236 QPLDKINVDTDRDYFMSAKEAKEYGLIDGVIMNPLKALQPLPASS 280
>gi|326505348|dbj|BAK03061.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 284
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/225 (80%), Positives = 208/225 (92%), Gaps = 1/225 (0%)
Query: 75 KGIWSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDD 134
+GIWSIR+DL +P SPY P A G++ G P PM++ RFQ+V+SQLFQHRIIRCGGPVEDD
Sbjct: 61 RGIWSIRDDLLMPRSPYFPVEAAGQERG-PSPMVMERFQSVVSQLFQHRIIRCGGPVEDD 119
Query: 135 MANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASM 194
MAN+IVAQLLYLDAVDPNKDIIMY+NSPGGSVTAGMAIFDT++HIRPDVSTVC+GLAASM
Sbjct: 120 MANVIVAQLLYLDAVDPNKDIIMYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASM 179
Query: 195 GAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTG 254
GAFLLS GTKGKRYSLPNSRIMIHQPLGGAQG ++D+++QANEMLHHKANLNGYL+YHTG
Sbjct: 180 GAFLLSGGTKGKRYSLPNSRIMIHQPLGGAQGQETDLEIQANEMLHHKANLNGYLAYHTG 239
Query: 255 QTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQPVAAAA 299
Q L+KIN DTDRDFFMSA+EAK+YGLIDGV++NP K LQP+ A++
Sbjct: 240 QPLDKINVDTDRDFFMSAKEAKEYGLIDGVIVNPLKALQPLPASS 284
>gi|357112555|ref|XP_003558074.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 5,
chloroplastic-like [Brachypodium distachyon]
Length = 282
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/225 (80%), Positives = 207/225 (92%), Gaps = 1/225 (0%)
Query: 75 KGIWSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDD 134
+GIWSIR+DL +P SPY P + G Q GP PM++ RFQ+V+SQLFQHRIIRCGGPVEDD
Sbjct: 59 RGIWSIRDDLLMPRSPYFPIESAG-QDRGPSPMVMERFQSVVSQLFQHRIIRCGGPVEDD 117
Query: 135 MANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASM 194
MAN+IVAQLLYLDA+DPNKDIIMY+NSPGGSVTAGMAIFDT++HIRPDVSTVC+GLAASM
Sbjct: 118 MANVIVAQLLYLDAIDPNKDIIMYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASM 177
Query: 195 GAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTG 254
GAFLLS GTKGKRYSLPNSRIMIHQPLGGAQG ++D+++QANEMLHHKANLNGYL+YHTG
Sbjct: 178 GAFLLSGGTKGKRYSLPNSRIMIHQPLGGAQGQETDLEIQANEMLHHKANLNGYLAYHTG 237
Query: 255 QTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQPVAAAA 299
Q L+KIN DTDRDFFMSA+EAK+YGLIDGV+MNP K LQP+ A++
Sbjct: 238 QPLDKINVDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLPASS 282
>gi|116791922|gb|ABK26160.1| unknown [Picea sitchensis]
Length = 303
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/226 (82%), Positives = 205/226 (90%), Gaps = 3/226 (1%)
Query: 71 ESTWK-GIWSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGG 129
EST GIWSIRNDL VPSS Y TYAQG G GPPPML RFQ+V+SQLFQHRIIRCGG
Sbjct: 74 ESTVSSGIWSIRNDLAVPSSLYCGTYAQG--GQGPPPMLQERFQSVISQLFQHRIIRCGG 131
Query: 130 PVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVG 189
V+DDMAN+IVAQLLYLDA DPN+DIIMY+NSPGGSVTAGMA+FDT+RHIRPDVSTVCVG
Sbjct: 132 AVDDDMANLIVAQLLYLDAADPNRDIIMYINSPGGSVTAGMAVFDTMRHIRPDVSTVCVG 191
Query: 190 LAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYL 249
LAASMGAFLLS+GTKGKRYSLPNSRIMIHQPLGG QG QSD+++QANE+LHHKANLNGYL
Sbjct: 192 LAASMGAFLLSSGTKGKRYSLPNSRIMIHQPLGGGQGQQSDLEIQANEILHHKANLNGYL 251
Query: 250 SYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQPV 295
+YHTGQ++EKI EDTDRDFFMSA+EAKDYGLIDGV+ NP K L P+
Sbjct: 252 AYHTGQSIEKIVEDTDRDFFMSAKEAKDYGLIDGVIANPLKALPPL 297
>gi|168004996|ref|XP_001755197.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693790|gb|EDQ80141.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 251
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/224 (78%), Positives = 200/224 (89%)
Query: 77 IWSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMA 136
WSIRNDLEVPSS ++ A+ + G GPPPML RFQ+V++QLFQ RIIRCGG V+DDMA
Sbjct: 19 FWSIRNDLEVPSSGFLGEGARAQGGQGPPPMLAERFQSVITQLFQQRIIRCGGAVDDDMA 78
Query: 137 NIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGA 196
N+IVAQLLYLDA DPN+DI+MY+NSPGGSVTAGMAIFDT+RHIRPDVSTVCVGLAASMGA
Sbjct: 79 NLIVAQLLYLDAADPNRDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGA 138
Query: 197 FLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQT 256
FLLS GTKGKRYSLPNSRIMIHQPLGGAQG Q+DI++QANE+LHHKANLNGYL+YHTGQ
Sbjct: 139 FLLSGGTKGKRYSLPNSRIMIHQPLGGAQGQQTDIEIQANEILHHKANLNGYLAYHTGQP 198
Query: 257 LEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQPVAAAAG 300
EKI +DTDRDFFMSA+EA++YGLID V+ NP K L+P+ AA G
Sbjct: 199 YEKIVQDTDRDFFMSAKEAQEYGLIDAVISNPLKALRPLPAANG 242
>gi|168048812|ref|XP_001776859.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671715|gb|EDQ58262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 265
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/224 (78%), Positives = 199/224 (88%)
Query: 77 IWSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMA 136
IWSIRNDLEVP+S ++ A+ + G GPPPML RFQ+V++QLFQ RIIRCGG V+DDMA
Sbjct: 33 IWSIRNDLEVPTSGFLGEGARAQGGQGPPPMLAERFQSVITQLFQQRIIRCGGAVDDDMA 92
Query: 137 NIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGA 196
N+IVAQLLYLDA DPN+DI+MY+NSPGGSVTAGMAIFDT+RHIRPDVSTVCVGLAASMGA
Sbjct: 93 NLIVAQLLYLDAADPNRDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGA 152
Query: 197 FLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQT 256
FLLS GTKGKRYSLPNSRIMIHQPLGGAQG Q+DI++QANE+LHHKANLNGYL+YHTGQ
Sbjct: 153 FLLSGGTKGKRYSLPNSRIMIHQPLGGAQGQQTDIEIQANEILHHKANLNGYLAYHTGQP 212
Query: 257 LEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQPVAAAAG 300
EKI +DTDRDFFMSA+EAK+YGLID V+ NP K L+ AA G
Sbjct: 213 YEKIVQDTDRDFFMSAKEAKEYGLIDAVISNPLKALRSPPAANG 256
>gi|302760453|ref|XP_002963649.1| hypothetical protein SELMODRAFT_67117 [Selaginella moellendorffii]
gi|302785934|ref|XP_002974738.1| hypothetical protein SELMODRAFT_57153 [Selaginella moellendorffii]
gi|300157633|gb|EFJ24258.1| hypothetical protein SELMODRAFT_57153 [Selaginella moellendorffii]
gi|300168917|gb|EFJ35520.1| hypothetical protein SELMODRAFT_67117 [Selaginella moellendorffii]
Length = 235
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/223 (79%), Positives = 199/223 (89%), Gaps = 2/223 (0%)
Query: 76 GIWSIRNDLEVPSSPYIP-TYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDD 134
G+WSIR DLEVP S Y+ YA G QG GPPPML RFQ+V++QLFQHRIIRCGG V+DD
Sbjct: 14 GLWSIRRDLEVPPSAYLGGAYAAG-QGQGPPPMLQERFQSVITQLFQHRIIRCGGAVDDD 72
Query: 135 MANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASM 194
MAN+IVAQLLYLDA DP KDI+MY+NSPGGSVTAGMA+FDT+RHIRPDVSTVCVGLAASM
Sbjct: 73 MANLIVAQLLYLDAADPKKDIVMYVNSPGGSVTAGMAVFDTMRHIRPDVSTVCVGLAASM 132
Query: 195 GAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTG 254
GAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQG QSDI++QANE+LHHKANLN YLSYHTG
Sbjct: 133 GAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGQQSDIEIQANEILHHKANLNSYLSYHTG 192
Query: 255 QTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQPVAA 297
Q LE+I +DTDRDFFMS +EA++YGLIDGV+ NP K L P+ A
Sbjct: 193 QPLERIIQDTDRDFFMSPKEAQEYGLIDGVISNPLKALSPLPA 235
>gi|168018159|ref|XP_001761614.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687298|gb|EDQ73682.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 303
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 171/224 (76%), Positives = 200/224 (89%)
Query: 77 IWSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMA 136
IWSIRNDLE+P+S ++ + + G GPPPML RFQ+V++QLFQ RIIRCGG V+DDMA
Sbjct: 71 IWSIRNDLELPTSGFMGQSPRAQGGQGPPPMLAERFQSVITQLFQQRIIRCGGAVDDDMA 130
Query: 137 NIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGA 196
N+IVAQLLYLDA DP++DI+MY+NSPGGSVTAGMAIFDT+RHIRPDVSTVCVGLAASMGA
Sbjct: 131 NLIVAQLLYLDAADPDRDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGA 190
Query: 197 FLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQT 256
FLLS GTKGKRYSLPNSRIMIHQPLGGAQG Q+DI++QANE+LHHKANLNGYL+YHTGQ
Sbjct: 191 FLLSGGTKGKRYSLPNSRIMIHQPLGGAQGQQTDIEIQANEILHHKANLNGYLAYHTGQP 250
Query: 257 LEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQPVAAAAG 300
EKI +DTDRDFFMSA+EA++YGLID V+ NP K L+P+ +A G
Sbjct: 251 YEKIVQDTDRDFFMSAKEAQEYGLIDAVISNPLKALRPLPSANG 294
>gi|356503934|ref|XP_003520754.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent Clp protease
proteolytic subunit 5, chloroplastic-like [Glycine max]
Length = 286
Score = 327 bits (838), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 165/234 (70%), Positives = 189/234 (80%), Gaps = 21/234 (8%)
Query: 82 NDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQH--------RIIRCGGPVED 133
+DL VPSSPY P YAQG + PPPM+ RFQ+V+ LFQ+ RIIRCGG V+D
Sbjct: 38 DDLRVPSSPYFPAYAQGHE---PPPMVQERFQSVIRXLFQYLGLFFLPLRIIRCGGAVDD 94
Query: 134 DMANIIVAQLLYLDAVDPN--------KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVST 185
DM+NI+VAQLLYLD + +DI+MY++SPGGSVTAGMAIFDT+RHIRPDVST
Sbjct: 95 DMSNILVAQLLYLDVLTRTXSTTNYFVQDIVMYVSSPGGSVTAGMAIFDTMRHIRPDVST 154
Query: 186 VCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANL 245
VC+GLAAS GAFLLSAGTKGKRYSLPNSRIMIHQPL G QGGQ+DID+QANEMLHHKAN
Sbjct: 155 VCIGLAASKGAFLLSAGTKGKRYSLPNSRIMIHQPLSG-QGGQTDIDIQANEMLHHKAN- 212
Query: 246 NGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQPVAAAA 299
GYLSYHTGQ+LEKIN+DTD DFFM A+EAK+YG IDG +MNP K LQP+ AA
Sbjct: 213 XGYLSYHTGQSLEKINQDTDCDFFMKAKEAKEYGFIDGAIMNPLKALQPLPAAV 266
>gi|224128302|ref|XP_002320293.1| predicted protein [Populus trichocarpa]
gi|222861066|gb|EEE98608.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 152/167 (91%), Positives = 165/167 (98%)
Query: 135 MANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASM 194
MANIIVAQLLYLDAVDPNKDI+MY+NSPGGSVTAGMAIFDT+RHIRPDVSTVCVGLAASM
Sbjct: 1 MANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASM 60
Query: 195 GAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTG 254
GAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDID+QANEMLHHKANLNGYL+YHTG
Sbjct: 61 GAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDIQANEMLHHKANLNGYLAYHTG 120
Query: 255 QTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQPVAAAAGQ 301
Q+LEKIN+DTDRD+FMSA+EAKDYGLIDGV++NP K+LQP+AAAA Q
Sbjct: 121 QSLEKINQDTDRDYFMSAKEAKDYGLIDGVILNPLKVLQPLAAAADQ 167
>gi|356572797|ref|XP_003554552.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent Clp protease
proteolytic subunit 5, chloroplastic-like [Glycine max]
Length = 287
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 159/244 (65%), Positives = 189/244 (77%), Gaps = 20/244 (8%)
Query: 56 VKAAYTSDYSSLDDCESTWKGIWSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNV 115
VKA Y +++ + + S+ +GIWSIR + + + Q QG GPPPM+ RFQ+V
Sbjct: 56 VKAVYANEFWAPE--RSSRQGIWSIRCFIYLICFMFFSF--QYAQGHGPPPMVQERFQSV 111
Query: 116 LSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDT 175
+SQLFQ+RI+RCGG V+DDM+NIIVAQLLYLDA+DPNKDI+MY+NS GGSV A MAIFDT
Sbjct: 112 ISQLFQYRIVRCGGAVDDDMSNIIVAQLLYLDAIDPNKDIVMYVNSLGGSVAAAMAIFDT 171
Query: 176 IRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQA 235
+RHIRPDVSTVC+GLAASMGA LLSAGTKG RYSLPNSRIMIHQPLGGAQGGQ+DID+QA
Sbjct: 172 MRHIRPDVSTVCIGLAASMGAILLSAGTKGNRYSLPNSRIMIHQPLGGAQGGQTDIDIQA 231
Query: 236 NEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQPV 295
NEMLHH G+L DRDFF+SA+EAK+YGLIDGV+MNP K LQP+
Sbjct: 232 NEMLHHX--FFGFL--------------LDRDFFLSAKEAKEYGLIDGVIMNPLKALQPL 275
Query: 296 AAAA 299
AA
Sbjct: 276 PGAA 279
>gi|307102787|gb|EFN51055.1| hypothetical protein CHLNCDRAFT_141566 [Chlorella variabilis]
Length = 258
Score = 303 bits (777), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 140/191 (73%), Positives = 166/191 (86%), Gaps = 3/191 (1%)
Query: 101 GGGPPP---MLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIM 157
G GPPP M++ RFQ V+SQLF RI+R GGPV+DDMAN+IVAQLLYLD+ DPN+DI +
Sbjct: 63 GQGPPPPSPMVVERFQQVISQLFSQRIVRLGGPVDDDMANLIVAQLLYLDSADPNRDITL 122
Query: 158 YLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMI 217
Y+NSPGGSVTAGMA+FDT+RHIRP+VSTVCVGLAASMGAFLL++G +GKRYSLPNSRIMI
Sbjct: 123 YINSPGGSVTAGMAVFDTMRHIRPNVSTVCVGLAASMGAFLLASGHQGKRYSLPNSRIMI 182
Query: 218 HQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKD 277
HQPLGGAQG +DI++QANE+LHHK LNGYL+ TGQ+++ I DTDRDFFMSA+EA +
Sbjct: 183 HQPLGGAQGQAADIEIQANEILHHKLTLNGYLAEFTGQSMDTITADTDRDFFMSAQEAVE 242
Query: 278 YGLIDGVVMNP 288
YGLID VV P
Sbjct: 243 YGLIDAVVSKP 253
>gi|384247231|gb|EIE20718.1| hypothetical protein COCSUDRAFT_37603 [Coccomyxa subellipsoidea
C-169]
Length = 226
Score = 303 bits (775), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 148/203 (72%), Positives = 172/203 (84%), Gaps = 8/203 (3%)
Query: 101 GGGPPP---MLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIM 157
G GPPP ++ RFQ V+SQLFQ RI+R GGPV+DDMAN+IVAQLLYLD+ +KDIIM
Sbjct: 26 GQGPPPPNPAVVERFQQVISQLFQQRIVRMGGPVDDDMANLIVAQLLYLDSTS-SKDIIM 84
Query: 158 YLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMI 217
Y+NSPGGSVTAGMA+FDT+RHIRPDVSTVCVGLAASMGAFLL++G KGKRYSLPNSRIMI
Sbjct: 85 YVNSPGGSVTAGMAVFDTMRHIRPDVSTVCVGLAASMGAFLLASGHKGKRYSLPNSRIMI 144
Query: 218 HQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKD 277
HQPLGGAQG +DI++QANE+LHHK LNGYL+ TGQ++E+I +DTDRDFFM A+EA D
Sbjct: 145 HQPLGGAQGQAADIEIQANEILHHKLTLNGYLAEFTGQSMERITQDTDRDFFMGAKEAVD 204
Query: 278 YGLIDGVVMNPHKILQPVAAAAG 300
YGLIDGV+ P Q VAA G
Sbjct: 205 YGLIDGVITRP----QLVAATNG 223
>gi|302833543|ref|XP_002948335.1| hypothetical protein VOLCADRAFT_80119 [Volvox carteri f.
nagariensis]
gi|300266555|gb|EFJ50742.1| hypothetical protein VOLCADRAFT_80119 [Volvox carteri f.
nagariensis]
Length = 256
Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 140/219 (63%), Positives = 173/219 (78%), Gaps = 12/219 (5%)
Query: 81 RNDLEVPSS----------PYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGP 130
R L VPSS P+ P QG P P+++ RFQ V+SQLFQ RI+R GG
Sbjct: 28 RAQLWVPSSEVKLAVSSRDPHPPVICQGPPP--PNPLVIERFQGVVSQLFQQRIVRLGGA 85
Query: 131 VEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGL 190
V+DDMAN++VAQLLYLD+VDP +DI MY+NSPGGSVTAGMA+FDT+RHIRPDVST C+G+
Sbjct: 86 VDDDMANLLVAQLLYLDSVDPKRDITMYVNSPGGSVTAGMAVFDTMRHIRPDVSTCCIGM 145
Query: 191 AASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLS 250
AASMGAF+L++G +GKRYSLPNSRIMIHQPLGGAQG +DI++QANE+LHHK LNGYL+
Sbjct: 146 AASMGAFILTSGQQGKRYSLPNSRIMIHQPLGGAQGQATDIEIQANEILHHKLTLNGYLA 205
Query: 251 YHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPH 289
+GQ++E I +DTDRDFFMS +EA +YGLID ++ P
Sbjct: 206 QFSGQSMETITKDTDRDFFMSPQEAIEYGLIDAIIAKPQ 244
>gi|159465361|ref|XP_001690891.1| active subunit of the chloroplast ClpP complex [Chlamydomonas
reinhardtii]
gi|158279577|gb|EDP05337.1| active subunit of the chloroplast ClpP complex [Chlamydomonas
reinhardtii]
Length = 256
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 137/223 (61%), Positives = 177/223 (79%), Gaps = 5/223 (2%)
Query: 72 STWKGIWSIRNDLEVPSS---PYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCG 128
S+ +W+ +++++ S P+ P QG P P+++ RFQ V+SQLFQ RI+R G
Sbjct: 27 SSAPELWTPTSEVKLAVSSRNPHPPVVCQGPPP--PNPLVIERFQGVVSQLFQQRIVRLG 84
Query: 129 GPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCV 188
G V+DDMAN++VAQLLYLD+VD +DI MY+NSPGGSVTAGMA+FDT+RHIRPDVST C+
Sbjct: 85 GAVDDDMANLLVAQLLYLDSVDNKRDITMYVNSPGGSVTAGMAVFDTMRHIRPDVSTCCI 144
Query: 189 GLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGY 248
GLAASMGAF+L++G GKRYSLPNSRIMIHQPLGGAQG +DI++QANE+LHHK LNGY
Sbjct: 145 GLAASMGAFILASGQAGKRYSLPNSRIMIHQPLGGAQGQATDIEIQANEILHHKLTLNGY 204
Query: 249 LSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKI 291
L+ TGQ++E I +DTDRDFFMS +EA +YGL+D ++ P +
Sbjct: 205 LAQFTGQSMETITKDTDRDFFMSPQEAIEYGLVDAIISKPQML 247
>gi|145342132|ref|XP_001416147.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144576372|gb|ABO94440.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 251
Score = 293 bits (750), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 135/197 (68%), Positives = 164/197 (83%)
Query: 95 YAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKD 154
Y +QG GP P++L RFQ+V SQL RIIR GG V+DD N+IVAQLL+LDA DP KD
Sbjct: 41 YVSNQQGKGPSPIVLERFQSVASQLMSQRIIRLGGAVDDDSCNLIVAQLLWLDAADPTKD 100
Query: 155 IIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSR 214
I +Y+NSPGGSVTAGMA+FDT+RHIRP+VSTVCVGLAASMGAFLL++G GKRYSLPNSR
Sbjct: 101 ITLYVNSPGGSVTAGMAVFDTMRHIRPNVSTVCVGLAASMGAFLLASGHPGKRYSLPNSR 160
Query: 215 IMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEE 274
IMIHQPLGGAQG +DI++QANE++HHK+ LNGYL+ T + LE + EDTDRDFFMSA+E
Sbjct: 161 IMIHQPLGGAQGQAADIEIQANEIMHHKSTLNGYLAEFTKKPLETVMEDTDRDFFMSAKE 220
Query: 275 AKDYGLIDGVVMNPHKI 291
A +YGLID ++ +P +
Sbjct: 221 AVEYGLIDAIIEHPTDV 237
>gi|255071043|ref|XP_002507603.1| predicted protein [Micromonas sp. RCC299]
gi|226522878|gb|ACO68861.1| predicted protein [Micromonas sp. RCC299]
Length = 272
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 131/194 (67%), Positives = 163/194 (84%)
Query: 98 GEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIM 157
+Q GP P+++ RFQ V SQL RIIR GG V+DD N+IVAQLL+LDA DP KDI +
Sbjct: 65 AQQSKGPSPIVMERFQGVASQLMNQRIIRLGGAVDDDSCNLIVAQLLWLDATDPKKDITL 124
Query: 158 YLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMI 217
Y+NSPGGSVTAGMA+FDT+RH+RPD+STVCVGLAASMGAFLL++G +GKR+SLPNSRIMI
Sbjct: 125 YVNSPGGSVTAGMAVFDTMRHVRPDISTVCVGLAASMGAFLLASGQQGKRFSLPNSRIMI 184
Query: 218 HQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKD 277
HQPLGGAQG +DI++QANE++HHK+ LNGYL+ TG+ L+ + +DTDRDFFMSA EAK+
Sbjct: 185 HQPLGGAQGQAADIEIQANEIMHHKSTLNGYLAEFTGKPLDTVMQDTDRDFFMSAFEAKE 244
Query: 278 YGLIDGVVMNPHKI 291
YGLID V+ +P +
Sbjct: 245 YGLIDSVIEHPTDV 258
>gi|412990319|emb|CCO19637.1| ATP-dependent Clp protease proteolytic subunit [Bathycoccus
prasinos]
Length = 270
Score = 290 bits (742), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 134/196 (68%), Positives = 163/196 (83%)
Query: 96 AQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDI 155
A +QG GPP ++ RFQ V SQL RIIR GG V+DD N+IVAQLL+LD++DP KDI
Sbjct: 61 AYAQQGRGPPAQVMERFQGVASQLMTQRIIRLGGAVDDDSCNLIVAQLLWLDSIDPKKDI 120
Query: 156 IMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRI 215
+Y+NSPGGSVTAGMA+FDT+RHIRPDVSTVCVGLAASMGAFLL++G KGKR+SLPNSRI
Sbjct: 121 TLYINSPGGSVTAGMAVFDTMRHIRPDVSTVCVGLAASMGAFLLASGQKGKRFSLPNSRI 180
Query: 216 MIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEA 275
MIHQPLGGAQG +DI++QANE++HHK+ LNGYL+ T + LEK+ EDTDRDFFMSA +A
Sbjct: 181 MIHQPLGGAQGQAADIEIQANEIMHHKSTLNGYLAEFTNKPLEKVMEDTDRDFFMSAADA 240
Query: 276 KDYGLIDGVVMNPHKI 291
YGLID ++ +P +
Sbjct: 241 VSYGLIDAIIDHPTNL 256
>gi|308800514|ref|XP_003075038.1| ClpP1 Clp protease proteolytic subunit ClpP (IC) [Ostreococcus
tauri]
gi|119358863|emb|CAL52310.2| ClpP1 Clp protease proteolytic subunit ClpP (IC) [Ostreococcus
tauri]
Length = 252
Score = 290 bits (741), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 133/198 (67%), Positives = 165/198 (83%)
Query: 94 TYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
Y +QG GP P+++ RFQ+V SQL RI+R GG V+DD N+IVAQLL+LDA DP+K
Sbjct: 41 VYVVDQQGKGPSPIVVERFQSVASQLMSQRIVRLGGAVDDDGCNLIVAQLLWLDAADPDK 100
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI +Y+NSPGGSVTAGMA+FDT+RHIRP+VSTVCVGLAASMGAFLL++G GKRYSLPNS
Sbjct: 101 DITLYINSPGGSVTAGMAVFDTMRHIRPNVSTVCVGLAASMGAFLLASGEAGKRYSLPNS 160
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
RIMIHQPLGGAQG +DI++QANE++HHK+ LNGYL+ T + L+ + EDTDRDFFMSA+
Sbjct: 161 RIMIHQPLGGAQGQAADIEIQANEIMHHKSTLNGYLAEFTKKPLQTVMEDTDRDFFMSAQ 220
Query: 274 EAKDYGLIDGVVMNPHKI 291
EA +YGLID ++ +P I
Sbjct: 221 EALEYGLIDSIIEHPADI 238
>gi|359480168|ref|XP_003632410.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 5,
chloroplastic isoform 2 [Vitis vinifera]
Length = 215
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/196 (72%), Positives = 165/196 (84%), Gaps = 7/196 (3%)
Query: 31 LRFSPLRLRKMIVSSNRERKCEKFGVKAAYTSDYSSLDDCESTWKGIWSIRNDLEVPSSP 90
L FS + K++ S R R VKAAY+ ++ + D +++ +G WSIR+DL++PSS
Sbjct: 26 LSFSSRKFTKLVGSEKRLRVAP---VKAAYSGEFWAPD--KNSRQGTWSIRDDLQIPSSA 80
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
Y PTYAQG QG PPPM+ RFQ+V+SQLFQHRIIRCGG V+DDMANIIVAQLLYLDAVD
Sbjct: 81 YFPTYAQGGQG--PPPMVQERFQSVVSQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVD 138
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P+KDI+MY+NSPGGSVTAGMAIFDT+RHIRPDVSTVCVGLAASMGAFLLS GTKGKRYSL
Sbjct: 139 PDKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSCGTKGKRYSL 198
Query: 211 PNSRIMIHQPLGGAQG 226
PNSRIMIHQPLGGAQG
Sbjct: 199 PNSRIMIHQPLGGAQG 214
>gi|303274250|ref|XP_003056447.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462531|gb|EEH59823.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 209
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 128/195 (65%), Positives = 156/195 (80%), Gaps = 3/195 (1%)
Query: 100 QGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYL 159
Q GPPPM++ RFQ+V +QL RIIR GG V+DD N+IVAQLL+LDA DPN+DI +Y+
Sbjct: 1 QSKGPPPMVMERFQSVATQLMNQRIIRLGGAVDDDSCNLIVAQLLWLDAADPNQDITIYV 60
Query: 160 NSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGK---RYSLPNSRIM 216
NSPGGSVTAGMA+FDT+RH+RP+VSTVCVGLAASMG F + YSLPNSRIM
Sbjct: 61 NSPGGSVTAGMAVFDTMRHVRPNVSTVCVGLAASMGKFTYEIHLRPPYLFSYSLPNSRIM 120
Query: 217 IHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAK 276
IHQPLGGAQG +DI++QANE++HHK+ LNGYL+ TG+ LE + EDTDRDFFMSA EAK
Sbjct: 121 IHQPLGGAQGQAADIEIQANEIMHHKSTLNGYLAEFTGKPLEMVMEDTDRDFFMSATEAK 180
Query: 277 DYGLIDGVVMNPHKI 291
+YGLID V+ +P +
Sbjct: 181 EYGLIDTVIEHPTDV 195
>gi|218192668|gb|EEC75095.1| hypothetical protein OsI_11253 [Oryza sativa Indica Group]
Length = 464
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 122/147 (82%), Positives = 141/147 (95%)
Query: 153 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 212
+DIIMY+NSPGGSVTAGMAIFDT++HIRPDVSTVC+GLAASMGAFLLSAGTKGKRYSLPN
Sbjct: 318 EDIIMYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASMGAFLLSAGTKGKRYSLPN 377
Query: 213 SRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSA 272
SRIMIHQPLGGAQG ++D+++QANEMLHHKANLNGYL+YHTGQ L+KIN DTDRD+FMSA
Sbjct: 378 SRIMIHQPLGGAQGQETDLEIQANEMLHHKANLNGYLAYHTGQPLDKINVDTDRDYFMSA 437
Query: 273 EEAKDYGLIDGVVMNPHKILQPVAAAA 299
+EAK+YGLIDGV+MNP K LQP+ A++
Sbjct: 438 KEAKEYGLIDGVIMNPLKALQPLPASS 464
>gi|326496965|dbj|BAJ98509.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 146
Score = 263 bits (671), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 121/146 (82%), Positives = 139/146 (95%)
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DIIMY+NSPGGSVTAGMAIFDT++HIRPDVSTVC+GLAASMGAFLLS GTKGKRYSLPNS
Sbjct: 1 DIIMYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASMGAFLLSGGTKGKRYSLPNS 60
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
RIMIHQPLGGAQG ++D+++QANEMLHHKANLNGYL+YHTGQ L+KIN DTDRDFFMSA+
Sbjct: 61 RIMIHQPLGGAQGQETDLEIQANEMLHHKANLNGYLAYHTGQPLDKINVDTDRDFFMSAK 120
Query: 274 EAKDYGLIDGVVMNPHKILQPVAAAA 299
EAK+YGLIDGV++NP K LQP+ A++
Sbjct: 121 EAKEYGLIDGVIVNPLKALQPLPASS 146
>gi|428319265|ref|YP_007117147.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
gi|428242945|gb|AFZ08731.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
Length = 202
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 123/186 (66%), Positives = 150/186 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G V+ D+AN+IVAQLL+LDA DP KDI +YLNSPGGSVTAGM IF
Sbjct: 17 DIYSRLLRDRIVFLGQQVDSDLANLIVAQLLFLDAEDPEKDIYLYLNSPGGSVTAGMGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+ HIRPDV T+C+GLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG +DI++
Sbjct: 77 DTMNHIRPDVCTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQ 293
QA E+L+HK LN +L+ HTGQ L +I EDT+RDFFMSAEEAKDYGL+D V+ +
Sbjct: 137 QAKEILYHKRRLNEHLANHTGQPLSRIEEDTERDFFMSAEEAKDYGLVDQVIDRRPSASR 196
Query: 294 PVAAAA 299
P+AA
Sbjct: 197 PIAAVV 202
>gi|443312110|ref|ZP_21041730.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechocystis
sp. PCC 7509]
gi|442777788|gb|ELR88061.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechocystis
sp. PCC 7509]
Length = 202
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 124/179 (69%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V+ ++AN+IVAQLL+LDA D KDI +Y+NSPGGSVTAGM
Sbjct: 14 RAFDIYSRLLRERIVFLGQKVDSNLANLIVAQLLFLDAEDAEKDIFLYINSPGGSVTAGM 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDTI+HIRPDV T+C GLAASMGAFLLSAGTKGKR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTIKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPNSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPH 289
I++QA E+L+HK LN +L+ HTGQ LEKI EDT+RDFFMS EAKDYGLID V+ N H
Sbjct: 134 IEIQAKEILYHKRKLNEHLAEHTGQPLEKIAEDTERDFFMSPTEAKDYGLIDQVI-NRH 191
>gi|334121380|ref|ZP_08495450.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
gi|333455094|gb|EGK83755.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
Length = 202
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 121/186 (65%), Positives = 150/186 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G V+ D+AN+IVAQLL+LDA DP KDI +Y+NSPGGSVTAGM IF
Sbjct: 17 DIYSRLLRDRIVFLGQQVDSDLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+ HIRPD+ T+C+GLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG +DI++
Sbjct: 77 DTMNHIRPDICTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQ 293
QA E+L+HK LN +L+ HTGQ L +I EDT+RDFFMSAEEAKDYGL+D V+ +
Sbjct: 137 QAKEILYHKRRLNEHLANHTGQPLSRIEEDTERDFFMSAEEAKDYGLVDQVIDRRPSASR 196
Query: 294 PVAAAA 299
P+AA
Sbjct: 197 PIAAVV 202
>gi|298490862|ref|YP_003721039.1| ATP-dependent Clp protease proteolytic subunit ClpP ['Nostoc
azollae' 0708]
gi|298232780|gb|ADI63916.1| ATP-dependent Clp protease, proteolytic subunit ClpP ['Nostoc
azollae' 0708]
Length = 201
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 121/172 (70%), Positives = 146/172 (84%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V+ +AN+IVAQLL+LDA DP KDI MY+NSPGGSVTAGM IF
Sbjct: 17 DIYSRLLRERIIFLGQQVDSGLANLIVAQLLFLDAEDPEKDIYMYINSPGGSVTAGMGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+++IRPDV T+C GLAASMGAFLLSAGTKGKR SLP+SRIMIHQPLGGAQG +DI++
Sbjct: 77 DTMKNIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+HK LNGYL+ HTGQ LE+I EDT+RDFFMS EEA++YGLID V+
Sbjct: 137 QAREILYHKRKLNGYLAQHTGQPLERIAEDTERDFFMSPEEAQEYGLIDQVI 188
>gi|354566299|ref|ZP_08985472.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
gi|353546807|gb|EHC16255.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
Length = 201
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 120/172 (69%), Positives = 146/172 (84%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G ++D++AN+IVAQLL+LDA DP KDI +Y+NSPGGSVTAGM IF
Sbjct: 17 DIYSRLLRERIIFLGQAIDDNVANLIVAQLLFLDAEDPEKDIYVYINSPGGSVTAGMGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HIRPDV T+C GLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGA+G +DI++
Sbjct: 77 DTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGARGQATDIEI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+HK LN YL+ HTGQ LEKI EDT+RDFFMS EEA+DYGLID V+
Sbjct: 137 QAREILYHKRRLNEYLAEHTGQPLEKIAEDTERDFFMSPEEARDYGLIDQVI 188
>gi|186686250|ref|YP_001869446.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
gi|186468702|gb|ACC84503.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
Length = 203
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/175 (69%), Positives = 147/175 (84%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V++++AN+IVAQLLYLDA DP KDI MY+NSPGGSVTAGM
Sbjct: 14 RAFDIYSRLLRERIIFLGQQVDNNIANLIVAQLLYLDAEDPEKDIYMYINSPGGSVTAGM 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT++HIRPDV T+C GLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+HK LN YL+ HTGQ +E+I EDT+RDFFMS EEA++YGLID V+
Sbjct: 134 IEIQAREILYHKKRLNDYLADHTGQPIERIAEDTERDFFMSPEEAREYGLIDQVI 188
>gi|75906770|ref|YP_321066.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
gi|110816454|sp|Q3MFR5.1|CLPP1_ANAVT RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|75700495|gb|ABA20171.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
Length = 204
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/183 (66%), Positives = 150/183 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V+ ++AN+IVAQLL+LDA DP KDI +Y+NSPGGSVTAGM IF
Sbjct: 18 DIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIF 77
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HIRPDV T+C GLAASMGAFLLSAGTKGKR SLP+SRIMIHQPLGGAQG +DI++
Sbjct: 78 DTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 137
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQ 293
QA E+L+HK LN YL+ HTGQ +E+I EDT+RDFFMS +EA+DYGLID V+ +
Sbjct: 138 QAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEARDYGLIDQVIDRHAAGSR 197
Query: 294 PVA 296
PVA
Sbjct: 198 PVA 200
>gi|428306359|ref|YP_007143184.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
gi|428247894|gb|AFZ13674.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
Length = 202
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 119/172 (69%), Positives = 146/172 (84%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V+ D+AN+IVAQLL+L+A DP KDI +Y+NSPGGSV+AGM IF
Sbjct: 17 DIYSRLLRERIIFLGQQVDADLANLIVAQLLFLEAEDPEKDIYLYINSPGGSVSAGMGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+ IRPD+ST+CVGLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG +DI++
Sbjct: 77 DTMNQIRPDISTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+HK LN +L+ HTGQ LEKI EDT+RDFFMSAEE+K+YGLID V+
Sbjct: 137 QAKEILYHKRRLNEFLAQHTGQPLEKIEEDTERDFFMSAEESKNYGLIDQVI 188
>gi|428311957|ref|YP_007122934.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
gi|428253569|gb|AFZ19528.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
Length = 202
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 118/172 (68%), Positives = 145/172 (84%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G PV+ D+AN+IVAQLL+L+A D KDI +Y+NSPGGSVTAGM IF
Sbjct: 17 DIYSRLLRERIVFLGQPVDSDLANLIVAQLLFLEAEDAEKDIYLYINSPGGSVTAGMGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+ +RPDV T+CVGLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG +DI++
Sbjct: 77 DTMNQVRPDVCTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+HK LN +L+ HTGQ +E+I EDT+RDFFMSAEEAKDYGLID V+
Sbjct: 137 QAREILYHKRRLNEFLAEHTGQPIERIEEDTERDFFMSAEEAKDYGLIDQVI 188
>gi|17228733|ref|NP_485281.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
gi|21759071|sp|Q8YXH5.1|CLPP1_ANASP RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|17130585|dbj|BAB73195.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
Length = 204
Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 121/183 (66%), Positives = 149/183 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G V+ ++AN+IVAQLL+LDA DP KDI +Y+NSPGGSVTAGM IF
Sbjct: 18 DIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIF 77
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HIRPDV T+C GLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG +DI++
Sbjct: 78 DTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 137
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQ 293
QA E+L+HK LN YL+ HTGQ +E+I EDT+RDFFMS +EAKDYGLID V+ +
Sbjct: 138 QAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAKDYGLIDQVIDRHAAGSR 197
Query: 294 PVA 296
PVA
Sbjct: 198 PVA 200
>gi|440682480|ref|YP_007157275.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
gi|428679599|gb|AFZ58365.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
Length = 201
Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 120/185 (64%), Positives = 149/185 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V+ +AN+IVAQLL+LD+ DP KDI MY+NSPGGSVTAGM IF
Sbjct: 17 DIYSRLLRERIIFLGQQVDSSLANLIVAQLLFLDSEDPEKDIYMYINSPGGSVTAGMGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HIRPDV T+C GLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG +DI++
Sbjct: 77 DTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQ 293
QA E+L+HK LN YL+ HTGQ +E+I EDT+RDFFMS EEA++YGLID V+ ++
Sbjct: 137 QAREILYHKKRLNDYLAEHTGQPIERIAEDTERDFFMSPEEAQEYGLIDQVIDRHAVGIR 196
Query: 294 PVAAA 298
P+A
Sbjct: 197 PMAVV 201
>gi|428209784|ref|YP_007094137.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chroococcidiopsis thermalis PCC 7203]
gi|428011705|gb|AFY90268.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chroococcidiopsis thermalis PCC 7203]
Length = 202
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/188 (64%), Positives = 150/188 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++ ++AN+IVAQLLYLDA D KDI +Y+NSPGGSVTAGM
Sbjct: 14 RAFDIYSRLLRERIIFLGQAIDSNLANLIVAQLLYLDAEDGEKDIYLYINSPGGSVTAGM 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT++HIRPDV T+C GLAASMGAFLLSAGTKGKR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPNSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L+HK LN +L+ HTGQ LE+I +DT+RDFFMS +EA DYGLID V+
Sbjct: 134 IEIQAKEILYHKRKLNEHLAEHTGQPLERIEQDTERDFFMSPQEAMDYGLIDQVIDKKAV 193
Query: 291 ILQPVAAA 298
+P+AA
Sbjct: 194 GRRPMAAV 201
>gi|427728056|ref|YP_007074293.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc sp.
PCC 7524]
gi|427363975|gb|AFY46696.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc sp.
PCC 7524]
Length = 203
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/186 (64%), Positives = 149/186 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V+ ++AN+IVAQLL+LDA DP KDI +Y+NSPGGSVTAGM IF
Sbjct: 18 DIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIF 77
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ IRPDV T+C GLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG +DI++
Sbjct: 78 DTMKQIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 137
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQ 293
QA E+L+HK LN YL+ HTGQ +E+I EDT+RDFFMS +EAK+YGLID V+ +
Sbjct: 138 QAREILYHKKRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAKEYGLIDQVIDRSSAGSR 197
Query: 294 PVAAAA 299
PVA +
Sbjct: 198 PVAVVS 203
>gi|428320528|ref|YP_007118410.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
gi|428244208|gb|AFZ09994.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
Length = 229
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/204 (61%), Positives = 155/204 (75%), Gaps = 5/204 (2%)
Query: 82 NDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVA 141
ND +V SSP EQ G + R ++ S+L + RI+ G PV D++A+ IVA
Sbjct: 15 NDFDVSSSPSNVVPMVLEQSG-----MGERAFDIYSRLLRERIVFLGTPVTDEVADSIVA 69
Query: 142 QLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSA 201
QLLYLDA DP KD+ MY+NSPGGSVTAGMAI+DT++ IRPDV T+C GLAASMGAFLL+A
Sbjct: 70 QLLYLDAEDPEKDVQMYINSPGGSVTAGMAIYDTMQQIRPDVVTICYGLAASMGAFLLTA 129
Query: 202 GTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKIN 261
G GKR SLP+SRIMIHQPLGGAQG DI++QA E+L+HK LN L++HTGQ +EK+
Sbjct: 130 GAHGKRMSLPSSRIMIHQPLGGAQGQAVDIEIQAKEILYHKRKLNQLLAHHTGQPIEKLE 189
Query: 262 EDTDRDFFMSAEEAKDYGLIDGVV 285
DT+RDFFMSAEEAK+YGL+D V+
Sbjct: 190 ADTERDFFMSAEEAKNYGLVDRVI 213
>gi|428297818|ref|YP_007136124.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
gi|428234362|gb|AFZ00152.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
Length = 201
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/175 (68%), Positives = 146/175 (83%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G ++ ++AN+IVAQLLYLD+ D KDI MY+NSPGGSVTAGM
Sbjct: 14 RAFDIYSRLLRERILFLGQAIDSNVANLIVAQLLYLDSEDSEKDIYMYINSPGGSVTAGM 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT++HIRPDV T+C GLAASMGAFLLSAGTKGKR SLP+SRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+HK LN YL+ HTGQ EKI+EDT+RDFFMS EEAK+YG+ID V+
Sbjct: 134 IEIQAKEILYHKRRLNEYLADHTGQPFEKISEDTERDFFMSPEEAKNYGIIDEVI 188
>gi|428222327|ref|YP_007106497.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7502]
gi|427995667|gb|AFY74362.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7502]
Length = 198
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 115/177 (64%), Positives = 150/177 (84%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G ++D+++N++VAQLL+L+A DP KDI +Y+NSPGGSVTAGM
Sbjct: 14 RAFDIFSRLLRERIVFLGTAIDDNVSNLVVAQLLFLEAEDPEKDIFIYINSPGGSVTAGM 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++HIRPDVST+CVGLAASMGAFLL+ GTKGKR SLP++RIMIHQPLGGAQG +D
Sbjct: 74 AIYDTMQHIRPDVSTICVGLAASMGAFLLAGGTKGKRLSLPHTRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++QA E+L+HK LN L++HTG++LE+I DTDRDFFMSA EA+ YGLID VV+
Sbjct: 134 IEIQAKEILYHKNRLNELLAFHTGRSLEEIGNDTDRDFFMSAVEAQAYGLIDQVVVK 190
>gi|334118528|ref|ZP_08492617.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
gi|333459535|gb|EGK88148.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
Length = 229
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/204 (61%), Positives = 155/204 (75%), Gaps = 5/204 (2%)
Query: 82 NDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVA 141
ND +V SSP EQ G + R ++ S+L + RI+ G PV D++A+ IVA
Sbjct: 15 NDFDVSSSPSNVVPMVLEQSG-----MGERAFDIYSRLLRERIVFLGTPVTDEVADSIVA 69
Query: 142 QLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSA 201
QLLYLDA DP KD+ MY+NSPGGSVTAGMAI+DT++ IRPDV T+C GLAASMGAFLL+A
Sbjct: 70 QLLYLDAEDPEKDVQMYINSPGGSVTAGMAIYDTMQQIRPDVVTICYGLAASMGAFLLTA 129
Query: 202 GTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKIN 261
G GKR SLP+SRIMIHQPLGGAQG DI++QA E+L+HK LN L++HTGQ L+K+
Sbjct: 130 GAHGKRMSLPSSRIMIHQPLGGAQGQAVDIEIQAKEILYHKRKLNQLLAHHTGQPLDKLE 189
Query: 262 EDTDRDFFMSAEEAKDYGLIDGVV 285
DT+RDFFMSAEEAK+YGL+D V+
Sbjct: 190 ADTERDFFMSAEEAKNYGLVDRVI 213
>gi|443479146|ref|ZP_21068788.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
biceps PCC 7429]
gi|443015411|gb|ELS30378.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
biceps PCC 7429]
Length = 198
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 115/172 (66%), Positives = 147/172 (85%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G V+D ++NIIVAQLL+L+A DP KDI +Y+NSPGGSVTAGMAI+
Sbjct: 17 DIFSRLLRERIVFLGQQVDDSISNIIVAQLLFLEADDPEKDIFLYINSPGGSVTAGMAIY 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HIRPDVST+CVGLAASMGAFLL+ G KGKR SLP++RIMIHQPLGGAQG +DI++
Sbjct: 77 DTMQHIRPDVSTICVGLAASMGAFLLTGGAKGKRLSLPHTRIMIHQPLGGAQGQATDIEI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+HK+ LN +++HTGQ +++I EDTDRDFFMS EAK+YGLID VV
Sbjct: 137 QAKEILYHKSRLNELMAFHTGQPIDRIAEDTDRDFFMSPYEAKNYGLIDEVV 188
>gi|428211847|ref|YP_007084991.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
gi|428000228|gb|AFY81071.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
Length = 234
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 115/172 (66%), Positives = 146/172 (84%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G PV+D++A++IVAQ+L+LDA DP KDI +Y+NSPGGSVTAGMAI+
Sbjct: 47 DLYSRLLRERIVFLGTPVDDNVADLIVAQMLFLDAEDPEKDIQLYINSPGGSVTAGMAIY 106
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ IRPDV+T+C GLAASMGAFLL+AG KGKR SLP+SRIMIHQPLGGAQG DI++
Sbjct: 107 DTMQQIRPDVATICYGLAASMGAFLLTAGAKGKRMSLPSSRIMIHQPLGGAQGQAVDIEI 166
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+HK LN L++HTGQ LE+I DTDRDFFMSAEE++ YGLID V+
Sbjct: 167 QAKEILYHKRQLNEMLAFHTGQPLERIEADTDRDFFMSAEESRAYGLIDQVI 218
>gi|427707070|ref|YP_007049447.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
gi|427359575|gb|AFY42297.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
Length = 201
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 115/172 (66%), Positives = 145/172 (84%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G ++ ++AN+IVAQ+L+LDA DP KDI MY+NSPGGSVTAGM IF
Sbjct: 17 DIYSRLLRERIIFLGQQIDSNLANLIVAQMLFLDAEDPEKDIYMYINSPGGSVTAGMGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HIRPDV T+C GLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG +DI++
Sbjct: 77 DTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+HK LN +L+ HTGQ +E+I EDT+RDFFMS +EA++YGLID V+
Sbjct: 137 QAREILYHKKRLNDFLAEHTGQPIERIAEDTERDFFMSPDEAREYGLIDQVI 188
>gi|434405726|ref|YP_007148611.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cylindrospermum stagnale PCC 7417]
gi|428259981|gb|AFZ25931.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cylindrospermum stagnale PCC 7417]
Length = 201
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 117/172 (68%), Positives = 144/172 (83%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V++ +AN+IVAQLL+LDA D KDI +Y+NSPGGSVTAGM IF
Sbjct: 17 DIYSRLLRERIIFLGQQVDNSIANLIVAQLLFLDAEDSEKDIYLYINSPGGSVTAGMGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HIRPDV T+C GLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG +DI++
Sbjct: 77 DTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+HK LN YL+ HTGQ +E+I EDT+RDFFMS EEA++YGLID V+
Sbjct: 137 QAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPEEAREYGLIDQVI 188
>gi|411118195|ref|ZP_11390576.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Oscillatoriales cyanobacterium JSC-12]
gi|410711919|gb|EKQ69425.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Oscillatoriales cyanobacterium JSC-12]
Length = 207
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 119/183 (65%), Positives = 145/183 (79%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G V+ D+AN++VAQLL+LDA DP KDI +Y+NSPGGSVTAGM IF
Sbjct: 23 DIYSRLLRERIVFLGQQVDSDLANLVVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIF 82
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ IRPDV T+C+GLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG +DI++
Sbjct: 83 DTMKQIRPDVCTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 142
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQ 293
QA E+L+HK LN L+ HTGQ +I EDT+RDFFMSA EAKDYGLID V+
Sbjct: 143 QAKEILYHKQRLNELLAEHTGQPFSRIQEDTERDFFMSAGEAKDYGLIDQVIDRRPSATN 202
Query: 294 PVA 296
PVA
Sbjct: 203 PVA 205
>gi|332707230|ref|ZP_08427283.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
gi|332353964|gb|EGJ33451.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
Length = 200
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 118/172 (68%), Positives = 142/172 (82%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G V+ D+AN++VAQLL+L+A D KDI +Y+NSPGGSVTAGM IF
Sbjct: 17 DIYSRLLRERIVFLGQQVDSDLANLVVAQLLFLEADDQEKDIYLYINSPGGSVTAGMGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+ + PDV T+CVGLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG SDI++
Sbjct: 77 DTMNQVAPDVCTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQASDIEI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+HK LN YL+ HTGQ LEKI EDT+RDFFMSA EAKDYGLID V+
Sbjct: 137 QAKEILYHKQQLNNYLAEHTGQPLEKIQEDTERDFFMSATEAKDYGLIDQVI 188
>gi|427718283|ref|YP_007066277.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
gi|427350719|gb|AFY33443.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
Length = 201
Score = 250 bits (638), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 120/185 (64%), Positives = 148/185 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V++ +AN+IVAQLL+LDA D KDI +Y+NSPGGSVTAGM IF
Sbjct: 17 DIYSRLLRERIIFLGQQVDNSIANLIVAQLLFLDADDSEKDIYLYINSPGGSVTAGMGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HIRPDV T+C GLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG +DI++
Sbjct: 77 DTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQ 293
QA E+L+HK LN YL+ HTGQ +E+I EDT+RDFFMS EEA++YGLID V+ +
Sbjct: 137 QAREILYHKKRLNDYLAEHTGQPIERIAEDTERDFFMSPEEAREYGLIDQVIDRHAAGSR 196
Query: 294 PVAAA 298
PVA
Sbjct: 197 PVAVV 201
>gi|428213615|ref|YP_007086759.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
gi|428001996|gb|AFY82839.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
Length = 201
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 120/185 (64%), Positives = 149/185 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G V+ D+AN+IVAQLL+L+A D KDI +Y+NSPGGSVTAGM IF
Sbjct: 17 DIYSRLLRDRIVFLGQQVDADLANLIVAQLLFLEAEDAEKDIYLYINSPGGSVTAGMGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+ HIRPDVST+C+GLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG +DI++
Sbjct: 77 DTMNHIRPDVSTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQ 293
QA E+L+HK LN LS HTGQ LE+I +DT+RDFFMSA+E+ DYGLID V+ +
Sbjct: 137 QAKEILYHKKRLNTLLSEHTGQPLERIEQDTERDFFMSAKESVDYGLIDLVIDRRPSASR 196
Query: 294 PVAAA 298
PVA +
Sbjct: 197 PVAVS 201
>gi|296136117|ref|YP_003643359.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiomonas
intermedia K12]
gi|295796239|gb|ADG31029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiomonas
intermedia K12]
Length = 202
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 147/175 (84%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GP+ D MAN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 24 RAYDIYSRLLRERVIFLVGPINDQMANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 83
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT++ I+PDVST+C G+AASMGAFL++AG KGKRYSLPNSRIMIHQP GGAQG +D
Sbjct: 84 AIFDTMQFIKPDVSTLCTGIAASMGAFLMAAGAKGKRYSLPNSRIMIHQPSGGAQGQATD 143
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ + LNG L+ TGQTLEKI DT+RDFFMSAEEAKDYGLID V+
Sbjct: 144 IEIQAREILYLRERLNGILAERTGQTLEKIGIDTERDFFMSAEEAKDYGLIDEVI 198
>gi|434393622|ref|YP_007128569.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
gi|428265463|gb|AFZ31409.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
Length = 202
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/184 (64%), Positives = 147/184 (79%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G ++ ++AN+IVAQLL+LDA D KDI +Y+NSPGGSVTAGM IF
Sbjct: 17 DIYSRLLRERIIFLGQQIDSNLANLIVAQLLFLDAEDSEKDIYLYINSPGGSVTAGMGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+ HIRPDV T+C GLAASMGAFLLSAGTKGKR SLPN+RIMIHQPLGGAQG +DI++
Sbjct: 77 DTMNHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPNARIMIHQPLGGAQGQATDIEI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQ 293
QA E+L+HK LN YL+ HT Q +E+I +DT+RDFFMS +EAKDYGLID V+ +
Sbjct: 137 QAKEILYHKRRLNEYLAAHTDQPIERIEQDTERDFFMSPDEAKDYGLIDQVINRSAVGNR 196
Query: 294 PVAA 297
PVA
Sbjct: 197 PVAV 200
>gi|300865787|ref|ZP_07110541.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
gi|300336200|emb|CBN55696.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
Length = 203
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/187 (63%), Positives = 148/187 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D+AN+IVAQLL+LDA DP KDI +Y+NSPGGSVTAGM
Sbjct: 14 RAFDIYSRLLRDRIVFLGQQVTSDLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGM 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ HIRP+VST+C+GLAASMGAFLLSAG KGKR +LP+SRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNHIRPEVSTICLGLAASMGAFLLSAGAKGKRMTLPHSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L+HK LN +L+ HTGQ L +I EDT+RDFFMSA EA +YGL+D V+
Sbjct: 134 IEIQAKEILYHKRRLNEHLAAHTGQPLSRIEEDTERDFFMSAAEATEYGLVDLVIDRRPS 193
Query: 291 ILQPVAA 297
+P+ A
Sbjct: 194 ATRPIVA 200
>gi|434387492|ref|YP_007098103.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chamaesiphon
minutus PCC 6605]
gi|428018482|gb|AFY94576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chamaesiphon
minutus PCC 6605]
Length = 203
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/175 (68%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ GG V D+AN+IVAQLL+L+A DP KDI +Y+NSPGGSV+AGM
Sbjct: 14 RAFDIYSRLLRDRIVFLGGQVTSDLANLIVAQLLFLEAEDPEKDIYLYINSPGGSVSAGM 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ IRPDVSTVC+G AASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNQIRPDVSTVCMGFAASMGAFLLSAGAKGKRTSLPSSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I +QA E+L+ K LN L+ HTGQ LEKI EDTDRDF+MSA EAKDYGLID V+
Sbjct: 134 IAIQAKEILYIKGTLNDLLAKHTGQPLEKIQEDTDRDFYMSAVEAKDYGLIDTVI 188
>gi|427733872|ref|YP_007053416.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rivularia sp.
PCC 7116]
gi|427368913|gb|AFY52869.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rivularia sp.
PCC 7116]
Length = 201
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 145/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++ ++AN+IVAQ+L LDA D KDI MY+NSPGGSVTAGM
Sbjct: 14 RAFDIYSRLLRDRIIFLGQPIDSNVANLIVAQMLLLDAEDAEKDIYMYINSPGGSVTAGM 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+RHIRPD+ T+C GLAASMGAFLL+AGTKGKR SLP+SRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMRHIRPDICTICTGLAASMGAFLLTAGTKGKRMSLPHSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+HK LN YL+ +TGQ +E+I EDT+RDFFMS +AKDYGLID V+
Sbjct: 134 IEIQAKEILYHKQQLNQYLAENTGQPIERIAEDTERDFFMSPSDAKDYGLIDQVI 188
>gi|434398580|ref|YP_007132584.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
gi|428269677|gb|AFZ35618.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
Length = 200
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/172 (67%), Positives = 144/172 (83%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G V+DD+AN+IVAQLL+L+A DP KDI +Y+NSPGGSV+AGM +F
Sbjct: 17 DIYSRLLRERIVFLGQQVDDDIANLIVAQLLFLEAEDPEKDIYLYINSPGGSVSAGMGMF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+ IRPDV T+C+GLAASMGAFLLSAG KGKR SLPNSRIMIHQPLGGAQG +DI++
Sbjct: 77 DTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGAQGQATDIEI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+ K LN +L+ HTGQ L KI EDT+RDFFMSAEE+K+YGLID V+
Sbjct: 137 QAKEILYLKQKLNQHLADHTGQPLSKIEEDTERDFFMSAEESKEYGLIDQVI 188
>gi|410693928|ref|YP_003624550.1| ATP-dependent Clp protease proteolytic subunit precursor
(Endopeptidase Clp) (Caseinolytic protease) (Protease
Ti) (Heat shock protein F21.5) [Thiomonas sp. 3As]
gi|294340353|emb|CAZ88734.1| ATP-dependent Clp protease proteolytic subunit precursor
(Endopeptidase Clp) (Caseinolytic protease) (Protease
Ti) (Heat shock protein F21.5) [Thiomonas sp. 3As]
Length = 202
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 147/175 (84%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GP+ D MAN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 24 RAYDIYSRLLRERVIFLVGPINDQMANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 83
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT++ I+PDVST+C G+AASMGAFL++AG KGKRYSLPNSRIMIHQP GGAQG +D
Sbjct: 84 AIFDTMQFIKPDVSTLCTGIAASMGAFLMAAGAKGKRYSLPNSRIMIHQPSGGAQGQATD 143
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ + LNG L+ TGQTLEKI DT+RDFFMSA+EAKDYGLID V+
Sbjct: 144 IEIQAREILYLRERLNGILAERTGQTLEKIGIDTERDFFMSADEAKDYGLIDEVI 198
>gi|414079240|ref|YP_007000664.1| peptidase family S14 ClpP [Anabaena sp. 90]
gi|413972519|gb|AFW96607.1| peptidase family S14 ClpP [Anabaena sp. 90]
Length = 201
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/172 (68%), Positives = 143/172 (83%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V+ ++AN+IVAQLL+LD+ D KDI MY+NSPGGSVTAGM IF
Sbjct: 17 DIYSRLLRERIIFLGEQVDSNLANLIVAQLLFLDSEDAEKDIYMYINSPGGSVTAGMGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HIRPDV T+C GLAASMGAFLLSAGTKGKR SLP+SRIMIHQPLGGAQG +DI +
Sbjct: 77 DTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQATDIAI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+HK LN +L+ HTGQ E+I+EDT+RDFFMS EAK+YGLID V+
Sbjct: 137 QAREILYHKQRLNEFLADHTGQPFERISEDTERDFFMSPAEAKEYGLIDQVI 188
>gi|170078453|ref|YP_001735091.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7002]
gi|169886122|gb|ACA99835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7002]
Length = 198
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 118/175 (67%), Positives = 143/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D++AN+IVAQLL+L+A DP KDI +Y+NSPGGSV+AGM
Sbjct: 14 RAFDIYSRLLRERIVFLGTQVNDEIANLIVAQLLFLEADDPEKDIYLYINSPGGSVSAGM 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ +RPDV T+C+GLAASMGAFLLSAG KGKR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNQVRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN +L+ HTGQ LEKI DTDRDFFMSA EAKDYGLID V+
Sbjct: 134 IEIQAKEILYLKGKLNQHLADHTGQPLEKIEIDTDRDFFMSAAEAKDYGLIDQVI 188
>gi|354567676|ref|ZP_08986844.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
gi|353542134|gb|EHC11598.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
Length = 231
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/175 (68%), Positives = 143/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +AN IVAQLL+LDA DP KDI +Y+NSPGGSV AGM
Sbjct: 41 RAFDIYSRLLRERIIFLGTPIDDTVANSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGM 100
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+ IRPDV T+C GLAASMGAFLL+AGT GKR SLP+SRIMIHQPLGGAQG D
Sbjct: 101 AIYDTIQQIRPDVVTICFGLAASMGAFLLAAGTAGKRMSLPDSRIMIHQPLGGAQGQAID 160
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN L++HTGQ LE+I DTDRDFFMSAEEAK+YGLID V+
Sbjct: 161 IEIQAREILYIKGKLNQLLAHHTGQPLERIEADTDRDFFMSAEEAKNYGLIDQVI 215
>gi|428770773|ref|YP_007162563.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
gi|428685052|gb|AFZ54519.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
Length = 196
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 118/176 (67%), Positives = 144/176 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D++AN +VAQLL L+A DP KDI +Y+NSPGGSV+AG+
Sbjct: 14 RAFDIYSRLLRERIIFLGQQVTDELANSLVAQLLLLEAEDPEKDIYLYINSPGGSVSAGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ I+PDV T+CVGLAASMGAFLLSAG KGKR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNQIKPDVCTICVGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVM 286
I++QA E+L+ K LN Y++ HTGQ L+KI EDT+RDFFMSAEEA+DYGLID VV+
Sbjct: 134 IEIQAKEILYLKKQLNHYMASHTGQPLDKIEEDTERDFFMSAEEARDYGLIDRVVI 189
>gi|428225971|ref|YP_007110068.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
gi|427985872|gb|AFY67016.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
Length = 200
Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 118/187 (63%), Positives = 146/187 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L Q RII G PV+ D+AN+IVAQLL+L+A DP KDI +Y+NSPGGSV+AGM
Sbjct: 14 RAFDIYSKLLQERIIFLGQPVDSDLANLIVAQLLFLEAEDPEKDIYLYINSPGGSVSAGM 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ H++PDV T+C+GLAASMGAFLL+AG KGKR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNHVKPDVCTICLGLAASMGAFLLAAGAKGKRMSLPNSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L+ K LN L+ TGQ L++I DTDRDFFMSAEEA+ YGLID V+
Sbjct: 134 IEIQAREILYIKRRLNEILAERTGQPLDRIETDTDRDFFMSAEEARTYGLIDQVIDRKPS 193
Query: 291 ILQPVAA 297
P+A
Sbjct: 194 ASNPIAV 200
>gi|282898518|ref|ZP_06306508.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
gi|281196684|gb|EFA71590.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
Length = 201
Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 117/185 (63%), Positives = 149/185 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G V+ +AN+IVAQLL+LD+ DP KDI MY+NSPGGSVTAGM IF
Sbjct: 17 DIYSRLLRERIVFLGQQVDSSLANLIVAQLLFLDSEDPEKDIYMYINSPGGSVTAGMGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+++IRPDV T+C GLAASMGAFLLSAGTKGKR SLP+SRIMIHQPLGGAQG +DI++
Sbjct: 77 DTMKNIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQ 293
QA E+L+HK LN YL+ HTGQ ++I EDT+RDFFMS +E+++YGLID V+ +
Sbjct: 137 QAREILYHKRKLNEYLAEHTGQPFDRIAEDTERDFFMSPQESREYGLIDQVIDRHAAGSR 196
Query: 294 PVAAA 298
P+A A
Sbjct: 197 PLALA 201
>gi|17231175|ref|NP_487723.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
gi|75909809|ref|YP_324105.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
gi|21759070|sp|Q8YQX8.1|CLPP2_ANASP RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|17132816|dbj|BAB75382.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
gi|75703534|gb|ABA23210.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
Length = 232
Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 120/175 (68%), Positives = 143/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +AN IVAQLL+LDA D KDI +Y+NSPGGSV AGM
Sbjct: 42 RAFDIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGM 101
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+ IRPDV T+C GLAASMGAFLL+AGTKGKR SLP+SRIMIHQPLGGAQG D
Sbjct: 102 AIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKRMSLPDSRIMIHQPLGGAQGQAID 161
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ KA LN L+ HTGQ LE+I DTDRDFFMSAEEAK+YGLID V+
Sbjct: 162 IEIQAREILYIKAQLNQLLANHTGQPLERIEADTDRDFFMSAEEAKNYGLIDQVI 216
>gi|119512812|ref|ZP_01631880.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414]
gi|119462534|gb|EAW43503.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414]
Length = 232
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 115/172 (66%), Positives = 143/172 (83%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V++++AN+IVAQLL+LD+ D KDI +Y+NSPGGSV AGM IF
Sbjct: 46 DIYSRLLRERIIFLGQQVDNEIANLIVAQLLFLDSEDSEKDIYLYINSPGGSVMAGMGIF 105
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HIRPDV T+C GL ASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG +DI++
Sbjct: 106 DTMKHIRPDVCTICTGLGASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 165
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+HK LN YL+ HTGQ +E+I EDT+RDFFMS EEAK+YGLID V+
Sbjct: 166 QAREILYHKQRLNEYLAEHTGQPIERIAEDTERDFFMSPEEAKEYGLIDQVI 217
>gi|115311350|sp|Q3M726.2|CLPP3_ANAVT RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
Length = 214
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 120/175 (68%), Positives = 143/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +AN IVAQLL+LDA D KDI +Y+NSPGGSV AGM
Sbjct: 24 RAFDIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGM 83
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+ IRPDV T+C GLAASMGAFLL+AGTKGKR SLP+SRIMIHQPLGGAQG D
Sbjct: 84 AIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKRMSLPDSRIMIHQPLGGAQGQAID 143
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ KA LN L+ HTGQ LE+I DTDRDFFMSAEEAK+YGLID V+
Sbjct: 144 IEIQAREILYIKAQLNQLLANHTGQPLERIEADTDRDFFMSAEEAKNYGLIDQVI 198
>gi|427734237|ref|YP_007053781.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rivularia sp.
PCC 7116]
gi|427369278|gb|AFY53234.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rivularia sp.
PCC 7116]
Length = 234
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 118/175 (67%), Positives = 143/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +AN +VAQLL+LDA D KDI +Y+NSPGGSVTAGM
Sbjct: 44 RAFDIYSRLLRERIIFLGTPIDDAVANSLVAQLLFLDADDSEKDIQIYVNSPGGSVTAGM 103
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+ IRPDV T+C GLAASMGA LL+AGT GKR SLP+SRIMIHQPLGGAQG D
Sbjct: 104 AIYDTIQQIRPDVVTICFGLAASMGALLLTAGTAGKRMSLPDSRIMIHQPLGGAQGQAVD 163
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+HK+ LN L+ HTGQ LEKI DT+RDFFMSAEEAK+YGLID V+
Sbjct: 164 IEIQAKEILYHKSKLNEILASHTGQPLEKIEADTERDFFMSAEEAKNYGLIDQVI 218
>gi|428202443|ref|YP_007081032.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
gi|427979875|gb|AFY77475.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
Length = 204
Score = 246 bits (629), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 121/191 (63%), Positives = 148/191 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D+ AN++VAQLL+L+A DP KDI +Y+NSPGGSV+AG+
Sbjct: 14 RAFDIYSRLLRERIVFLGQQVTDESANLVVAQLLFLEAEDPEKDIYLYINSPGGSVSAGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ IRPDV T+C+GLAASMGAFLLSAG KGKR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L+ K LN +L+ HTGQ L+KI EDT+RDFFMSAEEAK YGLID V+
Sbjct: 134 IEIQAKEILYLKNLLNEHLASHTGQPLDKIAEDTERDFFMSAEEAKTYGLIDQVINRRPS 193
Query: 291 ILQPVAAAAGQ 301
P AA GQ
Sbjct: 194 ASHPPAAVNGQ 204
>gi|282899048|ref|ZP_06307029.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
gi|281195964|gb|EFA70880.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
Length = 201
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/172 (66%), Positives = 144/172 (83%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G V+ +AN+IVAQLL+LD+ DP KDI MY+NSPGGSVTAGM IF
Sbjct: 17 DIYSRLLRERIVFLGQQVDSSLANLIVAQLLFLDSEDPEKDIYMYINSPGGSVTAGMGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+++IRP+V T+C GLAASMGAFLLSAGTKGKR SLP+SRIMIHQPLGGAQG +DI++
Sbjct: 77 DTMKNIRPNVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+HK LN YL+ HTGQ ++I EDT+RDFFMS +EA++YGLID V+
Sbjct: 137 QAREILYHKRKLNEYLAEHTGQPFDRIAEDTERDFFMSPQEAREYGLIDQVI 188
>gi|443311871|ref|ZP_21041494.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechocystis
sp. PCC 7509]
gi|442778107|gb|ELR88377.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechocystis
sp. PCC 7509]
Length = 219
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/175 (66%), Positives = 145/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V+D +A+ IVAQLL+LDA DP KDI +Y+NSPGGSVTAGM
Sbjct: 29 RAFDIYSRLLRERIVFLGTQVDDAVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVTAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+ IRPDV T+C GLAASMGAFLL+AG KGKR SLP++RIMIHQPLGGAQG D
Sbjct: 89 AIYDTIQQIRPDVVTICFGLAASMGAFLLTAGAKGKRMSLPSARIMIHQPLGGAQGQAVD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+HK+ LN L++HTG+ LE+I DT+RDFFMSAEEAK+YGLID V+
Sbjct: 149 IEIQAKEILYHKSRLNELLAHHTGKPLERIEADTERDFFMSAEEAKNYGLIDSVI 203
>gi|254410742|ref|ZP_05024520.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Coleofasciculus chthonoplastes PCC 7420]
gi|196182097|gb|EDX77083.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Coleofasciculus chthonoplastes PCC 7420]
Length = 202
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/172 (68%), Positives = 142/172 (82%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G V+ D+AN+IVAQLL+L+A DP KDI +Y+NSPGGSVTAGM I+
Sbjct: 17 DIYSRLLRERIVFLGQQVDSDLANLIVAQLLFLEADDPEKDIYLYINSPGGSVTAGMGIY 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+ IRPDV T+CVGLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG SDI++
Sbjct: 77 DTMNQIRPDVCTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQASDIEI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+HK LN L+ HT Q L++I EDT+RDFFMSAEEAKDY LID V+
Sbjct: 137 QAKEILYHKQRLNQLLAEHTDQPLDRIAEDTERDFFMSAEEAKDYRLIDQVI 188
>gi|300866516|ref|ZP_07111206.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
gi|300335473|emb|CBN56366.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
Length = 229
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/177 (64%), Positives = 144/177 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G PV+D +A+ IVAQLL+LDA DP KDI +Y+NSPGGSVTAGM
Sbjct: 39 RAFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVTAGM 98
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ +RPDV T+C GLAASMGAFL++AG GKR SLP+SRIMIHQPLGGAQG D
Sbjct: 99 AIYDTMQQVRPDVVTICYGLAASMGAFLMAAGAAGKRMSLPSSRIMIHQPLGGAQGQAVD 158
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++QA E+L+HK LN L++HTGQ LE+I DT+RDFFMSA EAKDYGL+D V++
Sbjct: 159 IEIQAKEILYHKRKLNELLAHHTGQPLERIEADTERDFFMSAAEAKDYGLVDQVILK 215
>gi|428216584|ref|YP_007101049.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
gi|427988366|gb|AFY68621.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
Length = 197
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 112/174 (64%), Positives = 146/174 (83%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G V+D ++N+IVAQ+L+L+A DP KDI +Y+NSPGGSVTAGMAI+
Sbjct: 17 DIFSRLLRERIVFLGQQVDDTVSNLIVAQMLFLEAEDPEKDIYLYVNSPGGSVTAGMAIY 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HI+PDVST+CVGLAASMGAFLL+ G GKR SLP++RIMIHQPLGGAQG +DI++
Sbjct: 77 DTMQHIQPDVSTICVGLAASMGAFLLAGGAAGKRLSLPHTRIMIHQPLGGAQGQAADIEI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
QA E+L+HK LN L+ HTGQ ++I EDT+RDFFMSA+EAKDYGL+D VV+
Sbjct: 137 QAKEILYHKQRLNELLASHTGQPFDRIAEDTERDFFMSAQEAKDYGLLDEVVVK 190
>gi|307150040|ref|YP_003885424.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
gi|306980268|gb|ADN12149.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
Length = 203
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/190 (62%), Positives = 149/190 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V +D+AN+IVAQLL+L++ DP+KDI +Y+NSPGGSV+AG+
Sbjct: 14 RAFDIYSRLLRDRIVFLGQEVTNDLANLIVAQLLFLESEDPDKDIYLYINSPGGSVSAGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ IRPDV T+C+GLAASMGAFLL+AG KGKR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNQIRPDVCTICIGLAASMGAFLLNAGAKGKRMSLPNSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L+ K LN +L+ TGQ LEKI EDT+RDFFMSAEEAKDYGLID V+
Sbjct: 134 IEIQAKEILYLKGLLNQHLASRTGQPLEKIAEDTERDFFMSAEEAKDYGLIDQVINRRPS 193
Query: 291 ILQPVAAAAG 300
P+ A G
Sbjct: 194 ASNPLPVAIG 203
>gi|218248285|ref|YP_002373656.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|257060388|ref|YP_003138276.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
gi|218168763|gb|ACK67500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|256590554|gb|ACV01441.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
Length = 201
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 146/175 (83%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D+ AN+IVAQLL+L+A DP+KDI +Y+NSPGGSV+AG+
Sbjct: 14 RAFDIYSRLLRERIVFLGQEVRDENANLIVAQLLFLEAEDPDKDIYLYINSPGGSVSAGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ IRPDVST+C+GLAASMGAFLLSAGTKGKR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNQIRPDVSTICIGLAASMGAFLLSAGTKGKRMSLPNSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN +L+ HTGQ L+KI EDT+RDFFMSAE+A +YGLID V+
Sbjct: 134 IEIQAKEILYLKQLLNQHLASHTGQPLDKIAEDTERDFFMSAEDALEYGLIDQVI 188
>gi|428217239|ref|YP_007101704.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
gi|427989021|gb|AFY69276.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
Length = 232
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/175 (62%), Positives = 148/175 (84%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G V+D++A++I++QLL+L+A DP KDI +Y+NSPGGSVTAGMAI+
Sbjct: 48 DIYSRLLRERIVFLGTQVDDNLASLIMSQLLFLEAEDPEKDIYLYINSPGGSVTAGMAIY 107
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++H++PDVST+C+GLAASMGAFLLSAG KGKR +LPN+RIMIHQPLGGA+G DI++
Sbjct: 108 DTLQHVQPDVSTICMGLAASMGAFLLSAGAKGKRMALPNARIMIHQPLGGARGQAVDIEI 167
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
QA E+L+HK LN L+ HTGQ+L++I DT+RDFFMS EAK+YGLID V++ P
Sbjct: 168 QAKEILYHKNTLNQLLAEHTGQSLDRIEADTERDFFMSPAEAKEYGLIDTVLVKP 222
>gi|428312433|ref|YP_007123410.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
gi|428254045|gb|AFZ20004.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
Length = 230
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 115/172 (66%), Positives = 142/172 (82%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V+D +A+ I+AQLL+LDA DP KDI +Y+NSPGGSVTAGMA++
Sbjct: 43 DIYSRLLRERIIFLGTQVDDTVADSIIAQLLFLDAEDPEKDIQLYINSPGGSVTAGMAMY 102
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ IRPDV T+C GLAASMGAFLL+AG GKR +LPNSRIMIHQPLGGAQG DI++
Sbjct: 103 DTMQQIRPDVVTICFGLAASMGAFLLTAGAPGKRMALPNSRIMIHQPLGGAQGQAIDIEI 162
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+HK LN L++HTGQ+LEKI DT+RDFFMSA EAKDYGLID V+
Sbjct: 163 QAREILYHKRTLNQLLAHHTGQSLEKIEADTERDFFMSAAEAKDYGLIDQVI 214
>gi|282898110|ref|ZP_06306105.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
gi|281197254|gb|EFA72155.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
Length = 236
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 143/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IVAQLL+LDA DP KD+ +Y+NSPGGSV AGM
Sbjct: 46 RAFDIYSRLLRERIIFLGTAIDDNVANSIVAQLLFLDAEDPEKDVQLYINSPGGSVYAGM 105
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+ IRPDV T+C GLAASMGAFLL+AGT GKR SLP+SRIMIHQPLGGAQG D
Sbjct: 106 AIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTAGKRMSLPDSRIMIHQPLGGAQGQAID 165
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ KANLN +S HTGQ LE+I DT+RDFFMS +EAKDYGLID V+
Sbjct: 166 IEIQAREILYIKANLNQLMSKHTGQPLERIEADTERDFFMSPQEAKDYGLIDQVI 220
>gi|427730195|ref|YP_007076432.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc sp.
PCC 7524]
gi|427366114|gb|AFY48835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc sp.
PCC 7524]
Length = 232
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/175 (68%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +AN IVAQLL+LDA D KDI +Y+NSPGGSV AGM
Sbjct: 42 RAFDIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGM 101
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+ IRPDV T+C GLAASMGAFLL+AGT GKR SLP+SRIMIHQPLGGAQG D
Sbjct: 102 AIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTPGKRMSLPDSRIMIHQPLGGAQGQAID 161
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ KA LN L+ HTGQ LE+I DTDRDFFMSAEEAK YGLID V+
Sbjct: 162 IEIQAREILYIKAQLNQLLAKHTGQPLERIETDTDRDFFMSAEEAKSYGLIDQVI 216
>gi|282900541|ref|ZP_06308485.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
gi|281194594|gb|EFA69547.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
Length = 237
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 143/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IVAQLL+LDA DP KD+ +Y+NSPGGSV AGM
Sbjct: 47 RAFDIYSRLLRERIIFLGTAIDDNVANSIVAQLLFLDAEDPEKDVQLYINSPGGSVYAGM 106
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+ IRPDV T+C GLAASMGAFLL+AGT GKR SLP+SRIMIHQPLGGAQG D
Sbjct: 107 AIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTAGKRMSLPDSRIMIHQPLGGAQGQAID 166
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ KANLN +S HTGQ LE+I DT+RDFFMS +EAKDYGLID V+
Sbjct: 167 IEIQAREILYIKANLNQLMSKHTGQPLERIEADTERDFFMSPQEAKDYGLIDQVI 221
>gi|113474441|ref|YP_720502.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
gi|110165489|gb|ABG50029.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
Length = 231
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 116/175 (66%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V++++AN I AQ+L+LDA DP KDI +Y+NSPGGSVTAGM
Sbjct: 41 RAFDLYSRLLRERIIFLGTQVDENLANTITAQMLFLDAEDPEKDIQLYINSPGGSVTAGM 100
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ +RPDV T+C GLAASMGAFLLS G KGKR SLP+SRIMIHQPLGGAQG D
Sbjct: 101 AIYDTMQQVRPDVVTICYGLAASMGAFLLSGGAKGKRMSLPSSRIMIHQPLGGAQGQAVD 160
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+HK LN L+ HTGQ LEKI DT+RDFFMSAEEAK+YGLID V+
Sbjct: 161 IEIQAKEILYHKRKLNELLAEHTGQPLEKIEVDTERDFFMSAEEAKNYGLIDQVI 215
>gi|224367556|ref|YP_002601719.1| protein ClpP1 [Desulfobacterium autotrophicum HRM2]
gi|259585947|sp|C0QGT0.1|CLPP_DESAH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|223690272|gb|ACN13555.1| ClpP1 [Desulfobacterium autotrophicum HRM2]
Length = 205
Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 115/187 (61%), Positives = 151/187 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN+IVAQLL+L++ DP KDI Y+NSPGG VTAGM
Sbjct: 16 RAYDIYSRLLKDRIIFLGSAMDDEVANLIVAQLLFLESEDPEKDINFYINSPGGVVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
A++DT+++I+PDV+TVC+G AASMGA LL+AG KGKR+SLPNSRIMIHQPLGGAQG SD
Sbjct: 76 AVYDTMQYIKPDVATVCIGQAASMGALLLAAGAKGKRFSLPNSRIMIHQPLGGAQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I +QANE+L K L+G LS HTGQ +KI+EDTDRDFFMS ++AK+YGL+D VV + +
Sbjct: 136 IKIQANEILRMKEVLSGILSKHTGQNFDKISEDTDRDFFMSGDQAKEYGLVDHVVASRDE 195
Query: 291 ILQPVAA 297
+ + AA
Sbjct: 196 LEKAEAA 202
>gi|428779425|ref|YP_007171211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
gi|428693704|gb|AFZ49854.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
Length = 199
Score = 244 bits (622), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 113/172 (65%), Positives = 143/172 (83%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V+D++ N+IVAQ+LYL+A DP KDI +Y+NSPGGSV+AG+ IF
Sbjct: 17 DIYSRLLRERIIFLGQQVDDEIGNLIVAQMLYLEAEDPEKDIYLYINSPGGSVSAGLGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+ +RPDVST+C+GLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG +DI++
Sbjct: 77 DTMNQVRPDVSTICLGLAASMGAFLLSAGAKGKRLSLPHSRIMIHQPLGGAQGQATDIEI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+ K LN YLS HTGQ LE+I EDT+RDFFMS +E+ +YGLID V+
Sbjct: 137 QAKEILYLKQQLNHYLSEHTGQPLERIEEDTERDFFMSPQESMEYGLIDRVI 188
>gi|428773238|ref|YP_007165026.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
gi|428687517|gb|AFZ47377.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
Length = 195
Score = 244 bits (622), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D++AN +VAQLL L+A DP KDI +Y+NSPGGSV+AG+
Sbjct: 14 RAFDIYSRLLRERIVFLGQQVTDELANSLVAQLLLLEAEDPEKDIYLYINSPGGSVSAGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ I+PDV T+CVGLAASMGAFLLSAG KGKR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNQIQPDVCTICVGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN Y++ HTGQ LEKI EDT+RDFFMSAEEA +YGLID VV
Sbjct: 134 IEIQAKEILYLKKQLNHYMASHTGQPLEKIEEDTERDFFMSAEEAVNYGLIDRVV 188
>gi|16332037|ref|NP_442765.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
gi|383323780|ref|YP_005384634.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326949|ref|YP_005387803.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383492833|ref|YP_005410510.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384438101|ref|YP_005652826.1| ATP-dependent protease [Synechocystis sp. PCC 6803]
gi|451816189|ref|YP_007452641.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
gi|1705930|sp|P54416.1|CLPP1_SYNY3 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|1001349|dbj|BAA10836.1| ATP-dependent protease; ClpP [Synechocystis sp. PCC 6803]
gi|339275134|dbj|BAK51621.1| ATP-dependent protease [Synechocystis sp. PCC 6803]
gi|359273100|dbj|BAL30619.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359276270|dbj|BAL33788.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359279440|dbj|BAL36957.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407960326|dbj|BAM53566.1| ATP-dependent protease ClpP [Bacillus subtilis BEST7613]
gi|451782158|gb|AGF53127.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
Length = 198
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 145/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D+ AN++VAQLL+L+A DP KDI +Y+NSPGGSV+AG+
Sbjct: 14 RAFDIYSRLLRERIVFLGQEVRDENANLVVAQLLFLEAEDPEKDIYLYINSPGGSVSAGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ IRPDV T+C+GLAASMGAFLLSAG KGKR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ KA LN +L+ HTG++LE+I DT+RDFFMSAEE+K+YGLID V+
Sbjct: 134 IEIQAKEILYLKALLNQHLANHTGKSLEEITADTERDFFMSAEESKEYGLIDQVI 188
>gi|172035557|ref|YP_001802058.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. ATCC
51142]
gi|354554806|ref|ZP_08974109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. ATCC 51472]
gi|171697011|gb|ACB49992.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
gi|353552960|gb|EHC22353.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. ATCC 51472]
Length = 202
Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 119/188 (63%), Positives = 149/188 (79%), Gaps = 1/188 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D+ +N+IVAQLL+L+A DP+KDI +Y+NSPGGSV+AG+
Sbjct: 14 RAFDIYSRLLRERIVFLGQEVRDENSNLIVAQLLFLEAEDPDKDIYLYINSPGGSVSAGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ IRPDV T+C+GLAASMGAFLLSAG KGKR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV-MNPH 289
I++QA E+L+ K LN +L+ HTGQ L+KI EDT+RDFFMSAEEA++YGLID V+ P
Sbjct: 134 IEIQAKEILYLKGLLNNHLANHTGQPLDKIAEDTERDFFMSAEEAQEYGLIDQVINRRPS 193
Query: 290 KILQPVAA 297
PV A
Sbjct: 194 ATNPPVTA 201
>gi|428222892|ref|YP_007107062.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7502]
gi|427996232|gb|AFY74927.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7502]
Length = 214
Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 114/177 (64%), Positives = 146/177 (82%), Gaps = 1/177 (0%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V D +A+++++QLL+L+A DP KDI +Y+NSPGGSVT+GMAI+
Sbjct: 38 DIFSRLLRERIIFLGTEVNDSVASVMMSQLLFLEAEDPQKDIYVYINSPGGSVTSGMAIY 97
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++H+RPDVST+C+GLAASMGAFLLSAG KGKR SLPNSRIMIHQPLGGA+G DI++
Sbjct: 98 DTMQHVRPDVSTICMGLAASMGAFLLSAGAKGKRLSLPNSRIMIHQPLGGARGQAVDIEI 157
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN-PH 289
QA E+L+HK LN L+ HTGQ L+KI +DT+RDFFMS EAK+YGLID V+ PH
Sbjct: 158 QAKEILYHKRTLNKLLAEHTGQPLDKIEQDTERDFFMSPAEAKNYGLIDQVLTKQPH 214
>gi|225848210|ref|YP_002728373.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225644423|gb|ACN99473.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 202
Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +AN+IVAQLL+L+A DP KDI MY+NSPGG VTAG
Sbjct: 21 RAYDIYSRLLKDRIILLGTPIDDHVANLIVAQLLFLEAEDPEKDIYMYINSPGGVVTAGF 80
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ +I+PDV T+C+G AASMGAFLLSAG KGKRYSLPN+RIMIHQPLGG QG +D
Sbjct: 81 AIYDTMNYIKPDVVTICIGQAASMGAFLLSAGAKGKRYSLPNARIMIHQPLGGFQGQATD 140
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L K LN YL+ HTGQ +EKI DT+RD+FMSAEEAK+YGLID V+
Sbjct: 141 IEIHAREILRLKRMLNEYLAKHTGQPIEKIEADTERDYFMSAEEAKEYGLIDKVI 195
>gi|86610014|ref|YP_478776.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
gi|115311349|sp|Q2JIP1.1|CLPP2_SYNJB RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|86558556|gb|ABD03513.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 200
Score = 243 bits (620), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 118/189 (62%), Positives = 151/189 (79%), Gaps = 3/189 (1%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V+DD+AN+IVAQ+LYL++ DP KDI +Y+NSPGGSV AGM
Sbjct: 14 RAFDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGM 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++HI+PDVST+C+GLAASMGAFLL+ GTKGKR +LP++RIMIHQPLGGAQG +D
Sbjct: 74 AIYDTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMIHQPLGGAQGPATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L K +LN L+YHTGQ LE+I DTDRD FM+ E+AK+YGLID V+ K
Sbjct: 134 IEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYGLIDQVI---SK 190
Query: 291 ILQPVAAAA 299
QP AA
Sbjct: 191 RPQPTLAAV 199
>gi|443316648|ref|ZP_21046084.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 6406]
gi|442783734|gb|ELR93638.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 6406]
Length = 226
Score = 243 bits (620), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 112/172 (65%), Positives = 141/172 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G PV D +A+ IVAQLL+LDA +P KD+ +Y+NSPGGSVTAGMAI+
Sbjct: 41 DIYSRLLRERIVFLGTPVTDAVADAIVAQLLFLDAEEPEKDVQIYINSPGGSVTAGMAIY 100
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ IRPDV T+C GLAASMGAFLL G KGKR SLP+SRIM+HQPLGGAQG DI++
Sbjct: 101 DTMQQIRPDVVTICFGLAASMGAFLLCGGAKGKRLSLPSSRIMVHQPLGGAQGQAVDIEI 160
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+HK LN +++H+GQTLE+I DT+RDF+MSAEEAK YGLID VV
Sbjct: 161 QAREILYHKQRLNELIAHHSGQTLERIEADTERDFYMSAEEAKRYGLIDQVV 212
>gi|443327406|ref|ZP_21056031.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
gi|442792934|gb|ELS02396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
Length = 201
Score = 243 bits (620), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 113/175 (64%), Positives = 143/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D+++N++VAQLLYL+A DP KDI +Y+NSPGGSV+AGM
Sbjct: 14 RAFDIYSRLLRERIVFLGQQVTDEISNLVVAQLLYLEAEDPEKDIYLYINSPGGSVSAGM 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+FDT+ +RPDV T+C+GLAASMGAFLLSAG KGKR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GMFDTMNQVRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN +L+ HTGQ L I EDT+RDFFMS+EEAK+YGLID V+
Sbjct: 134 IEIQAKEILYLKNKLNQHLADHTGQPLSTIEEDTERDFFMSSEEAKEYGLIDQVI 188
>gi|428300044|ref|YP_007138350.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
gi|428236588|gb|AFZ02378.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
Length = 231
Score = 243 bits (620), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 115/172 (66%), Positives = 143/172 (83%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G P++D++AN IVAQLL+LDA D KDI +Y+NSPGGSV AGMAI+
Sbjct: 44 DIYSRLLRERIIFLGTPIDDNVANSIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAIY 103
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DTI+ IRPDV T+C GLAASMGAFLL++GT GKR SLP+SRIMIHQPLGGAQG DI++
Sbjct: 104 DTIQQIRPDVVTICFGLAASMGAFLLTSGTAGKRMSLPDSRIMIHQPLGGAQGQAIDIEI 163
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+ KA LN +++HTGQ LE+I DT+RDFFMSAEEAK+YGLID V+
Sbjct: 164 QAREILYVKAELNKMMAHHTGQPLERITADTERDFFMSAEEAKNYGLIDQVI 215
>gi|411119403|ref|ZP_11391783.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Oscillatoriales cyanobacterium JSC-12]
gi|410711266|gb|EKQ68773.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Oscillatoriales cyanobacterium JSC-12]
Length = 229
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/189 (61%), Positives = 149/189 (78%), Gaps = 2/189 (1%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G P++D +A+ +VAQLL+L+A DP KDI +Y+NSPGGSVTAGM
Sbjct: 40 RAFDIYSRLLRERIVFLGTPIDDAVADSVVAQLLFLEAEDPEKDIQLYINSPGGSVTAGM 99
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ +R DV+T+C GLAASMGAFLL++GT GKR SLP+SR+MIHQPLGGAQG D
Sbjct: 100 AIYDTMQQVRCDVATICFGLAASMGAFLLASGTTGKRMSLPSSRVMIHQPLGGAQGQAVD 159
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV--MNP 288
I++QA E+L+HK LN LSYHT Q EKI DT+RDFFMSA EAK+YGLID V+ N
Sbjct: 160 IEIQAKEILYHKRKLNELLSYHTRQPFEKIEADTERDFFMSAAEAKEYGLIDQVISRQNL 219
Query: 289 HKILQPVAA 297
K +PVAA
Sbjct: 220 PKSGEPVAA 228
>gi|427720043|ref|YP_007068037.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
gi|427352479|gb|AFY35203.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
Length = 232
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +AN IVAQLL+LDA D KDI +Y+NSPGGSV AGM
Sbjct: 42 RAFDIYSRLLRERIIFLGTPIDDTVANSIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGM 101
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ IRPDV T+C GLAASMGAFLL+AG GKR SLP+SRIMIHQPLGGAQG D
Sbjct: 102 AIYDTMQQIRPDVVTICFGLAASMGAFLLTAGAAGKRMSLPDSRIMIHQPLGGAQGQAID 161
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ KA LN +S HTGQ+LEKI DT+RDFFMSAEEAK+YGLID V+
Sbjct: 162 IEIQAREILYIKAKLNQLMSQHTGQSLEKIEADTERDFFMSAEEAKNYGLIDQVI 216
>gi|427724133|ref|YP_007071410.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
gi|427355853|gb|AFY38576.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
Length = 199
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/175 (66%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D++AN+IVAQLL+L+A DP KDI +Y+NSPGGSV+AGM
Sbjct: 14 RAFDIYSRLLRERIVFLGQQVNDEIANLIVAQLLFLEADDPEKDIYLYINSPGGSVSAGM 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ +RPDV T+C+GLAASMGAFLLSAG KGKR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNQVRPDVCTICIGLAASMGAFLLSAGEKGKRMSLPNSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN +L+ HTGQ L+KI DTDRDFFMSA EA DYGLID V+
Sbjct: 134 IEIQAKEILYLKGKLNQHLADHTGQPLDKIEVDTDRDFFMSAAEAMDYGLIDQVI 188
>gi|67924586|ref|ZP_00518001.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|416404722|ref|ZP_11687744.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
gi|67853560|gb|EAM48904.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|357261483|gb|EHJ10747.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
Length = 202
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 145/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D+ +N+IVAQLL+L+A DP+KDI +Y+NSPGGSV+AG+
Sbjct: 14 RAFDIYSRLLRERIVFLGQEVRDENSNLIVAQLLFLEAEDPDKDIYLYINSPGGSVSAGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ IRPDV T+C+GLAASMGAFLLSAGTKGKR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNQIRPDVCTICIGLAASMGAFLLSAGTKGKRMSLPNSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN +L+ HT Q L+KI EDT+RDFFMSAEEA++YGLID V+
Sbjct: 134 IEIQAKEILYLKGLLNNHLASHTEQPLDKIAEDTERDFFMSAEEAQEYGLIDQVI 188
>gi|237755491|ref|ZP_04584113.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237692355|gb|EEP61341.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 201
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 144/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +AN++VAQLL+L++ DP+KDI MY+NSPGG VTAG+
Sbjct: 21 RAYDIYSRLLKDRIILLGTPIDDHIANLVVAQLLFLESEDPDKDIYMYINSPGGVVTAGL 80
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ +I+PDV T+C+G AASMGAFLLSAG KGKRYSLPN+RIMIHQPLGG QG +D
Sbjct: 81 AIYDTMNYIKPDVVTICMGQAASMGAFLLSAGAKGKRYSLPNARIMIHQPLGGFQGQATD 140
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L K LN YL+ HTGQ +EKI DT+RD+FMSAEEAK+YGLID V+
Sbjct: 141 IEIHAKEILRLKRMLNEYLAKHTGQPIEKIEADTERDYFMSAEEAKEYGLIDKVI 195
>gi|443322206|ref|ZP_21051237.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gloeocapsa
sp. PCC 73106]
gi|442788092|gb|ELR97794.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gloeocapsa
sp. PCC 73106]
Length = 202
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D++AN+IVAQLL+L+A DP KDI +Y+NSPGGSV+AG+
Sbjct: 14 RAFDIYSRLLRERIIFLGEEVTDELANLIVAQLLFLEAEDPEKDINLYINSPGGSVSAGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ + PDVST+C+GLAASMGAFLL+ G KGKR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNQVSPDVSTICIGLAASMGAFLLTGGAKGKRMSLPNSRIMIHQPLGGAQGQAAD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I +QA E+L+ K LN YL+ +T Q LEKI EDT+RDFFMSAEEAK YGLID V+
Sbjct: 134 IAIQAQEILYIKKKLNLYLANNTNQPLEKIEEDTERDFFMSAEEAKQYGLIDKVI 188
>gi|428307443|ref|YP_007144268.1| ATP-dependent Clp protease proteolytic subunit [Crinalium
epipsammum PCC 9333]
gi|428248978|gb|AFZ14758.1| ATP-dependent Clp protease proteolytic subunit [Crinalium
epipsammum PCC 9333]
Length = 228
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 153/204 (75%), Gaps = 6/204 (2%)
Query: 82 NDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVA 141
N+LEV SS + + G G R ++ S+L + RII G PV+D +A+ +VA
Sbjct: 15 NNLEVYSSSNVIPMVVEQTGLGE------RAFDIYSRLLRERIIFMGTPVDDTVADSLVA 68
Query: 142 QLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSA 201
QLL+L++ DP KDI +Y+NSPGGSVTAGMAI+DT++ IRPDV T+C GLAASMGAFLLS
Sbjct: 69 QLLFLESEDPEKDIQLYINSPGGSVTAGMAIYDTMQQIRPDVVTICFGLAASMGAFLLSG 128
Query: 202 GTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKIN 261
G KGKR +LP+SRIMIHQPLGGAQG DI++QA E+L+HK LN L+ HTGQ ++KI
Sbjct: 129 GAKGKRMALPSSRIMIHQPLGGAQGQAVDIEIQAKEILYHKRVLNELLAEHTGQPIDKIT 188
Query: 262 EDTDRDFFMSAEEAKDYGLIDGVV 285
DT+RDFFMS+ EAKDYGLID V+
Sbjct: 189 ADTERDFFMSSAEAKDYGLIDQVI 212
>gi|186681335|ref|YP_001864531.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
gi|186463787|gb|ACC79588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
Length = 232
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/172 (67%), Positives = 141/172 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G P++D +AN IVAQLL+LD+ D KDI MY+NSPGGSV AGMAI+
Sbjct: 45 DIYSRLLRERIIFLGTPIDDAVANSIVAQLLFLDSEDSEKDIQMYVNSPGGSVYAGMAIY 104
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DTI+ IRPDV T+C GLAASMGAFLL+AG GKR SLP+SRIMIHQPLGGAQG DI++
Sbjct: 105 DTIQQIRPDVVTICFGLAASMGAFLLTAGAAGKRMSLPDSRIMIHQPLGGAQGQAIDIEI 164
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+ KA LN +S+HTGQ LE+I DT+RDFFMSAEEAK+YGLID V+
Sbjct: 165 QAREILYVKAKLNQLMSHHTGQPLERIEADTERDFFMSAEEAKNYGLIDQVI 216
>gi|188996270|ref|YP_001930521.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188931337|gb|ACD65967.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 201
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 144/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +AN++VAQLL+L++ DP+KDI MY+NSPGG VTAG+
Sbjct: 21 RAYDIYSRLLKDRIILLGTPIDDHIANLVVAQLLFLESEDPDKDIYMYINSPGGVVTAGL 80
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ +I+PDV T+C+G AASMGAFLLSAG KGKRYSLPN+RIMIHQPLGG QG +D
Sbjct: 81 AIYDTMNYIKPDVVTICMGQAASMGAFLLSAGAKGKRYSLPNARIMIHQPLGGFQGQATD 140
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L K LN YL+ HTGQ +EKI DT+RD+FMSAEEAK+YGLID V+
Sbjct: 141 IEIHAREILRLKRMLNEYLAKHTGQPIEKIEADTERDYFMSAEEAKEYGLIDKVI 195
>gi|428775586|ref|YP_007167373.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
gi|428689865|gb|AFZ43159.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
Length = 199
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/172 (65%), Positives = 144/172 (83%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G V+D++AN+IVAQ+LYL+A DP KDI +Y+NSPGGSV+AG+ IF
Sbjct: 17 DIYSRLLRERIVFLGQQVDDEIANLIVAQMLYLEAEDPEKDIYLYINSPGGSVSAGLGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+ IRPDVST+C+GLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG +DI++
Sbjct: 77 DTMNQIRPDVSTICLGLAASMGAFLLSAGEKGKRLSLPHSRIMIHQPLGGAQGQATDIEI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+ K LN YL+ HTGQ L++I EDT+RDFFMS +E+ +YGLID V+
Sbjct: 137 QAKEILYLKQQLNHYLAEHTGQPLDRIAEDTERDFFMSPQESMEYGLIDRVI 188
>gi|298491692|ref|YP_003721869.1| ATP-dependent Clp protease proteolytic subunit ClpP ['Nostoc
azollae' 0708]
gi|298233610|gb|ADI64746.1| ATP-dependent Clp protease, proteolytic subunit ClpP ['Nostoc
azollae' 0708]
Length = 232
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 116/175 (66%), Positives = 143/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D++AN IVAQLL+LDA D KDI +Y+NSPGGSV AGM
Sbjct: 42 RAFDIYSRLLRERIIFLGTPIDDNVANSIVAQLLFLDAEDSGKDIQLYINSPGGSVYAGM 101
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+ IRPDV T+C GLAASMGAFLL+AGT GKR SLP+SRIMIHQPLGGAQG D
Sbjct: 102 AIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTAGKRMSLPDSRIMIHQPLGGAQGQAID 161
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K NLN ++ HTGQ L++I DT+RDFFMSAEEAK+YGLID V+
Sbjct: 162 IEIQAREILYIKGNLNQLMAKHTGQPLDRIEADTERDFFMSAEEAKNYGLIDQVI 216
>gi|113475211|ref|YP_721272.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
gi|110166259|gb|ABG50799.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
Length = 203
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 114/186 (61%), Positives = 147/186 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++ ++AN+IV QLLYLD+ DP KDI +Y+NSPGGSV+AGM
Sbjct: 14 RAFDIYSRLLRDRIIYLGEAIDSELANLIVGQLLYLDSEDPEKDIYLYINSPGGSVSAGM 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
I+DT+RH+RPDV T+C+G+AASMGAFLLS GTKGKR SLP+SRIMIHQPLGGAQG +D
Sbjct: 74 GIYDTMRHVRPDVCTICMGIAASMGAFLLSGGTKGKRMSLPHSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L+ K LN L+ HTGQ++EKI EDT+RDFFMSA EA +YG+ID V
Sbjct: 134 IEIQAKEILYLKKYLNECLAEHTGQSIEKITEDTERDFFMSATEAMEYGIIDQVYNRNPS 193
Query: 291 ILQPVA 296
QP++
Sbjct: 194 NSQPIS 199
>gi|428223754|ref|YP_007107851.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
gi|427983655|gb|AFY64799.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
Length = 229
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/172 (65%), Positives = 143/172 (83%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G PV+D +A+ IVAQLL+L+A DP KDI +Y+NSPGGSVTAGMAI+
Sbjct: 42 DIYSRLLRERIIFLGTPVDDAVADSIVAQLLFLEADDPEKDIQIYINSPGGSVTAGMAIY 101
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ +RPDV T+C GLAASMGAFLL++G +GKR SLPNSRIMIHQPLGGAQG DI++
Sbjct: 102 DTMQQVRPDVVTICFGLAASMGAFLLASGARGKRLSLPNSRIMIHQPLGGAQGQAVDIEI 161
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+HK LN LS+HTGQ L+++ DT+RDFFMSAEEA +YGLID V+
Sbjct: 162 QAREILYHKRRLNELLSHHTGQPLDRLEVDTERDFFMSAEEACNYGLIDQVI 213
>gi|434391262|ref|YP_007126209.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
gi|428263103|gb|AFZ29049.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
Length = 230
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 120/188 (63%), Positives = 148/188 (78%), Gaps = 2/188 (1%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V+D +A+ IVAQLL+LDA DP KDI +Y+NSPGGSVTAGM
Sbjct: 40 RAFDIYSRLLRERIIFLGTQVDDTVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVTAGM 99
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ IR DV+T+C GLAASMGAFLL+AG GKR SLPNSRIMIHQPLGGAQG D
Sbjct: 100 AIYDTMQQIRCDVATICFGLAASMGAFLLAAGAHGKRMSLPNSRIMIHQPLGGAQGQAVD 159
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV--MNP 288
I++QA E+L+ K LN L+YHTG+ LE+I DT+RDFFMSAEEAK+YGLID V+ N
Sbjct: 160 IEIQAKEILYLKRKLNEILAYHTGKPLERIEADTERDFFMSAEEAKNYGLIDQVISKQNL 219
Query: 289 HKILQPVA 296
K +PV+
Sbjct: 220 PKANEPVS 227
>gi|166363928|ref|YP_001656201.1| ATP-dependent protease [Microcystis aeruginosa NIES-843]
gi|425467657|ref|ZP_18846936.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9809]
gi|166086301|dbj|BAG01009.1| ATP-dependent protease [Microcystis aeruginosa NIES-843]
gi|389829532|emb|CCI29086.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9809]
Length = 200
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D+AN+IVAQLL+L+A DP KDI +Y+NSPGGSV+AG+
Sbjct: 14 RAFDIYSRLLRERIVFLGQEVTSDLANLIVAQLLFLEAEDPEKDIYLYINSPGGSVSAGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ IRPDVST+C+GLAASMGAFLLSAG GKR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNQIRPDVSTICIGLAASMGAFLLSAGKPGKRMSLPNSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN +L+ HTG+ L+ I EDT+RDFFMSAEEA DYGLID V+
Sbjct: 134 IEIQAKEILYLKQLLNEHLASHTGKPLDLIAEDTERDFFMSAEEALDYGLIDQVI 188
>gi|304437034|ref|ZP_07396997.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
gi|304369985|gb|EFM23647.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
Length = 203
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 111/178 (62%), Positives = 147/178 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP++D +AN+IVAQ+L+L++ DP+KDI +Y+NSPGG VTAG+
Sbjct: 17 RAYDIYSRLLKERIIFLGGPIDDSVANVIVAQMLFLESEDPDKDIHLYINSPGGVVTAGL 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG AASMG+ LL+AG KGKRY+LP++RIMIHQPLGGAQG +D
Sbjct: 77 AIYDTMQYIKPDVSTICVGQAASMGSILLTAGAKGKRYALPHARIMIHQPLGGAQGQSTD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
I +QA E+L + N L++HTGQ EKIN DT+RD FMSAEEAK+YGLID VV+ P
Sbjct: 137 IQIQAKEILRLREVGNEILAHHTGQDTEKINVDTERDNFMSAEEAKEYGLIDEVVLRP 194
>gi|425449262|ref|ZP_18829103.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 7941]
gi|440753940|ref|ZP_20933142.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa TAIHU98]
gi|389764138|emb|CCI09472.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 7941]
gi|440174146|gb|ELP53515.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa TAIHU98]
Length = 200
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D+AN+IVAQLL+L+A DP KDI +Y+NSPGGSV+AG+
Sbjct: 14 RAFDIYSRLLRERIVFLGQEVTSDLANLIVAQLLFLEAEDPEKDIYLYINSPGGSVSAGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ IRPDVST+C+GLAASMGAFLLSAG GKR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNQIRPDVSTICIGLAASMGAFLLSAGKPGKRMSLPNSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN +L+ HTG+ L+ I EDT+RDFFMSAEEA DYGLID V+
Sbjct: 134 IEIQAKEILYLKQLLNQHLASHTGKPLDLIAEDTERDFFMSAEEALDYGLIDQVI 188
>gi|86605879|ref|YP_474642.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-3-3Ab]
gi|115311348|sp|Q2JV68.1|CLPP2_SYNJA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|86554421|gb|ABC99379.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-3-3Ab]
Length = 200
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 145/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V+DD+AN+IVAQ+LYL++ DP KDI +Y+NSPGGSV AGM
Sbjct: 14 RAFDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGM 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++HI+PDVST+C+GLAASMGAFLL+ G KGKR +LP++RIMIHQPLGGAQG +D
Sbjct: 74 AIYDTMQHIQPDVSTICIGLAASMGAFLLAGGAKGKRIALPHARIMIHQPLGGAQGPATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L K +LN L+YHTGQ LE+I DTDRD FM+ E+AK+YGLID V+
Sbjct: 134 IEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYGLIDQVI 188
>gi|390442096|ref|ZP_10230114.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis sp. T1-4]
gi|425439844|ref|ZP_18820158.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9717]
gi|425471167|ref|ZP_18850027.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9701]
gi|389719848|emb|CCH96383.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9717]
gi|389834540|emb|CCI34240.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis sp. T1-4]
gi|389882956|emb|CCI36590.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9701]
Length = 200
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D+AN+IVAQLL+L+A DP KDI +Y+NSPGGSV+AG+
Sbjct: 14 RAFDIYSRLLRERIVFLGQEVTSDLANLIVAQLLFLEAEDPEKDIYLYINSPGGSVSAGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ IRPDVST+C+GLAASMGAFLLSAG GKR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNQIRPDVSTICIGLAASMGAFLLSAGKPGKRMSLPNSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN +L+ HTG+ L+ I EDT+RDFFMSAEEA DYGLID V+
Sbjct: 134 IEIQAKEILYLKQLLNQHLASHTGKPLDLIAEDTERDFFMSAEEALDYGLIDQVI 188
>gi|22298052|ref|NP_681299.1| ATP-dependent Clp protease proteolytic subunit [Thermosynechococcus
elongatus BP-1]
gi|34222557|sp|Q8DLI2.1|CLPP1_THEEB RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|22294230|dbj|BAC08061.1| ATP-dependent Clp protease proteolytic subunit 1
[Thermosynechococcus elongatus BP-1]
Length = 229
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 119/181 (65%), Positives = 143/181 (79%), Gaps = 6/181 (3%)
Query: 111 RFQNVLSQLFQHRIIRCGGP------VEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGG 164
R ++ S+L + RII GG ++D +A+ IVAQLL+LDA DP KDI +Y+NSPGG
Sbjct: 41 RAFDIYSRLLRERIIFLGGGAGDRRGIDDAVADSIVAQLLFLDAEDPEKDIYLYINSPGG 100
Query: 165 SVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGA 224
SVTAGMAI+DT++HIRPDV T+C GLAASMGAFLLS GT GKR +LPN+RIMIHQPLGGA
Sbjct: 101 SVTAGMAIYDTMKHIRPDVCTLCFGLAASMGAFLLSGGTPGKRMALPNARIMIHQPLGGA 160
Query: 225 QGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
QG DI++QA E+L+HK LN LS HTGQ +E+I DT+RDFFMSAEEAK YGLID V
Sbjct: 161 QGQAVDIEIQAREILYHKRKLNELLSQHTGQPIERIEADTERDFFMSAEEAKAYGLIDQV 220
Query: 285 V 285
V
Sbjct: 221 V 221
>gi|434402424|ref|YP_007145309.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cylindrospermum stagnale PCC 7417]
gi|428256679|gb|AFZ22629.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cylindrospermum stagnale PCC 7417]
Length = 232
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 116/175 (66%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +AN IVAQLL+LDA D KDI +Y+NSPGGSV AGM
Sbjct: 42 RAFDIYSRLLRERIIFLGTPIDDAVANSIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGM 101
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ IRP+V T+C GLAASMGAFLL+AG GKR SLP+SRIMIHQPLGGAQG D
Sbjct: 102 AIYDTMQQIRPNVVTICFGLAASMGAFLLTAGAAGKRMSLPDSRIMIHQPLGGAQGQAID 161
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ KA LN L+ HTGQ LEKI DT+RDFFMSAEEAK+YGLID V+
Sbjct: 162 IEIQAREILYIKAKLNQLLAQHTGQALEKIEADTERDFFMSAEEAKNYGLIDQVI 216
>gi|422304551|ref|ZP_16391894.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9806]
gi|425437033|ref|ZP_18817461.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9432]
gi|425446784|ref|ZP_18826783.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9443]
gi|425455241|ref|ZP_18834961.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9807]
gi|425462698|ref|ZP_18842165.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9808]
gi|443653952|ref|ZP_21131195.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa DIANCHI905]
gi|159028981|emb|CAO87442.1| clpP1 [Microcystis aeruginosa PCC 7806]
gi|389678071|emb|CCH93046.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9432]
gi|389732839|emb|CCI03287.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9443]
gi|389790315|emb|CCI13820.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9806]
gi|389803899|emb|CCI17216.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9807]
gi|389824204|emb|CCI27015.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9808]
gi|443333933|gb|ELS48469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa DIANCHI905]
Length = 199
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D+AN+IVAQLL+L+A DP KDI +Y+NSPGGSV+AG+
Sbjct: 14 RAFDIYSRLLRERIVFLGQEVTSDLANLIVAQLLFLEAEDPEKDIYLYINSPGGSVSAGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ IRPDVST+C+GLAASMGAFLLSAG GKR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNQIRPDVSTICIGLAASMGAFLLSAGKPGKRMSLPNSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN +L+ HTG+ L+ I EDT+RDFFMSAEEA DYGLID V+
Sbjct: 134 IEIQAKEILYLKQLLNQHLASHTGKPLDLIAEDTERDFFMSAEEALDYGLIDQVI 188
>gi|440684999|ref|YP_007159794.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
gi|428682118|gb|AFZ60884.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
Length = 232
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/175 (66%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +AN IVAQLL+LDA D KDI +Y+NSPGGSV AGM
Sbjct: 42 RAFDIYSRLLRERIIFLGTPIDDVVANSIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGM 101
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+ IRPDV T+C GLAASMGAFLL++G GKR SLP+SRIMIHQPLGGAQG D
Sbjct: 102 AIYDTIQQIRPDVVTICFGLAASMGAFLLTSGAAGKRMSLPDSRIMIHQPLGGAQGQAID 161
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K NLN ++ HTGQ LEKI DT+RDFFMSAEEAK+YGLID V+
Sbjct: 162 IEIQAREILYIKGNLNQLMAKHTGQPLEKIEADTERDFFMSAEEAKNYGLIDQVI 216
>gi|254421271|ref|ZP_05034989.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7335]
gi|196188760|gb|EDX83724.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7335]
Length = 269
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 113/172 (65%), Positives = 140/172 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G PV DD+A+ IVAQLL+LDA DP KD+ +Y+NSPGGSVTAGMAI+
Sbjct: 84 DIYSRLLRERIVFLGTPVMDDIADSIVAQLLFLDAEDPEKDVQLYINSPGGSVTAGMAIY 143
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ IRPDV T+C GLAASMGAFLLS G KGKR SLP++RIMIHQP GGAQG +DI++
Sbjct: 144 DTMQQIRPDVVTICFGLAASMGAFLLSGGAKGKRMSLPSARIMIHQPSGGAQGQSADIEI 203
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+ K LN L+ HTGQ + +I DT+RDFFMSAEEAK+YGLID VV
Sbjct: 204 QAREILYLKKRLNEMLADHTGQDISRIEADTERDFFMSAEEAKEYGLIDQVV 255
>gi|383323811|ref|YP_005384665.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|383326980|ref|YP_005387834.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|383492864|ref|YP_005410541.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|384438132|ref|YP_005652857.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|339275165|dbj|BAK51652.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|359273131|dbj|BAL30650.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|359276301|dbj|BAL33819.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|359279471|dbj|BAL36988.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
Length = 201
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 114/176 (64%), Positives = 142/176 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G PV+D +A+ IVAQLL+LDA DP KDI +Y+NSPGGSV AG+AI+
Sbjct: 14 DIYSRLLRERIIFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIY 73
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ IRPDV T+C GLAASMGAFLLS G KGKR +LP+SRIMIHQPLGGAQG +I++
Sbjct: 74 DTMQQIRPDVVTICFGLAASMGAFLLSGGCKGKRMALPSSRIMIHQPLGGAQGQAVEIEI 133
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPH 289
QA E+L+ K LN L HTGQ +EK+ EDT+RDFFMSAEEAK+YGLID V+ P+
Sbjct: 134 QAREILYIKDRLNTMLVEHTGQPMEKLQEDTERDFFMSAEEAKEYGLIDQVISRPN 189
>gi|16332068|ref|NP_442796.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|451816220|ref|YP_007452672.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|2493737|sp|Q59993.1|CLPP2_SYNY3 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|1001377|dbj|BAA10867.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|407960292|dbj|BAM53532.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|451782189|gb|AGF53158.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
Length = 226
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 143/179 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G PV+D +A+ IVAQLL+LDA DP KDI +Y+NSPGGSV AG+
Sbjct: 36 RAFDIYSRLLRERIIFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGL 95
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ IRPDV T+C GLAASMGAFLLS G KGKR +LP+SRIMIHQPLGGAQG +
Sbjct: 96 AIYDTMQQIRPDVVTICFGLAASMGAFLLSGGCKGKRMALPSSRIMIHQPLGGAQGQAVE 155
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPH 289
I++QA E+L+ K LN L HTGQ +EK+ EDT+RDFFMSAEEAK+YGLID V+ P+
Sbjct: 156 IEIQAREILYIKDRLNTMLVEHTGQPMEKLQEDTERDFFMSAEEAKEYGLIDQVISRPN 214
>gi|284929721|ref|YP_003422243.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
gi|284810165|gb|ADB95862.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
Length = 200
Score = 239 bits (611), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 143/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D+ +N+IVAQLL+L+A DP +DI +Y+NSPGGSV++G+
Sbjct: 14 RAFDIYSRLLRERIVFLGQEVRDENSNLIVAQLLFLEAEDPERDIYLYINSPGGSVSSGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ I+PDV TVC GLAASMGAFLLSAG KGKR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNKIQPDVCTVCTGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K+ LN +L+ HTGQ L KI EDT+RDFFMSAEEAK+YGLID V+
Sbjct: 134 IEIQAKEILYLKSLLNNHLADHTGQPLSKIAEDTERDFFMSAEEAKNYGLIDQVI 188
>gi|242309637|ref|ZP_04808792.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
pullorum MIT 98-5489]
gi|239523638|gb|EEQ63504.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
pullorum MIT 98-5489]
Length = 196
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/180 (62%), Positives = 145/180 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D +A+ IVAQLL+L+A DP KDI +Y+NSPGG VT+G+
Sbjct: 17 RSYDIYSRLLKDRIIMLSGQIDDGIASSIVAQLLFLEAEDPQKDIYLYINSPGGVVTSGL 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ +I+PD+ T+C+G AASMGAFLLS GTKGKRYSLPNSRIMIHQPLGGAQG +D
Sbjct: 77 SIYDTMNYIKPDICTICIGQAASMGAFLLSCGTKGKRYSLPNSRIMIHQPLGGAQGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L KA LN L+ +T Q+LEKI++DTDRDFFMSA+EAK YGLID V+ K
Sbjct: 137 IEIQAKEILRLKATLNEILAANTNQSLEKISKDTDRDFFMSAQEAKKYGLIDNVLTKSLK 196
>gi|209525239|ref|ZP_03273781.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
maxima CS-328]
gi|376006287|ref|ZP_09783579.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|423065156|ref|ZP_17053946.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis C1]
gi|209494254|gb|EDZ94567.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
maxima CS-328]
gi|375325348|emb|CCE19332.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|406713288|gb|EKD08459.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis C1]
Length = 237
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 144/177 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D++AN + AQ+L+L++ DP KDI +Y+NSPGGSVTAGM
Sbjct: 48 RAFDLYSRLLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQLYINSPGGSVTAGM 107
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
I+DT++ IRPDV T+C GLAASMGAFLL++GT GKR SLP+SRIMIHQPLGGAQG D
Sbjct: 108 GIYDTMQQIRPDVVTICYGLAASMGAFLLASGTAGKRMSLPSSRIMIHQPLGGAQGQAID 167
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++QA E+L+HK LN L+ HTGQ +E+IN DT+RDFFMSA EA++YGLID V++
Sbjct: 168 IEIQAKEILYHKHTLNTLLAQHTGQPIERINADTERDFFMSAAEAQEYGLIDNVILK 224
>gi|114567171|ref|YP_754325.1| ATP-dependent Clp protease proteolytic subunit [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
gi|122317850|sp|Q0AWF0.1|CLPP_SYNWW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114338106|gb|ABI68954.1| ATP-dependent Clp protease proteolytic subunit ClpP [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
Length = 200
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 148/180 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D +AN+++AQLL+L+A DP+KDI +Y+NSPGGS+TAGM
Sbjct: 17 RSYDIYSRLLKDRIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISLYINSPGGSITAGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++IRPDVST+CVGLAASMGAFLL+AG KGKRY+LPN+ IMIHQP GG QG +D
Sbjct: 77 AIYDTLQYIRPDVSTICVGLAASMGAFLLAAGKKGKRYALPNAEIMIHQPAGGTQGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ A +++ K +LN L+ TGQ LE+I +DTDRD+FM+A+EAK+YG+ID V+ +P K
Sbjct: 137 IEIHARRIMNMKESLNKILAERTGQPLERIQKDTDRDYFMTAQEAKEYGIIDEVISHPKK 196
>gi|119510658|ref|ZP_01629787.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414]
gi|119464709|gb|EAW45617.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414]
Length = 210
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +AN IVAQLL+LDA D KDI +Y+NSPGGSV AGM
Sbjct: 20 RAFDIYSRLLRERIIFLGTPIDDTVANSIVAQLLFLDAEDSEKDIQIYINSPGGSVYAGM 79
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ IRPDV T+C GLAASMGAFLL+AG+ GKR SLP+SRIMIHQPLGGAQG D
Sbjct: 80 AIYDTMQQIRPDVVTICFGLAASMGAFLLAAGSAGKRMSLPDSRIMIHQPLGGAQGQAID 139
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ KA LN L +HTGQ LE++ DT+RDFFMSAEEAK+YGLID V+
Sbjct: 140 IEIQAREILYVKAKLNQLLGHHTGQPLERLEADTERDFFMSAEEAKNYGLIDQVI 194
>gi|409993296|ref|ZP_11276442.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis str. Paraca]
gi|409935831|gb|EKN77349.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis str. Paraca]
Length = 237
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 144/177 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D++AN + AQ+L+L++ DP KDI +Y+NSPGGSVTAGM
Sbjct: 48 RAFDLYSRLLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQLYINSPGGSVTAGM 107
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
I+DT++ IRPDV T+C GLAASMGAFLL++GT GKR SLP+SRIMIHQPLGGAQG D
Sbjct: 108 GIYDTMQQIRPDVVTICYGLAASMGAFLLASGTAGKRMSLPSSRIMIHQPLGGAQGQAID 167
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++QA E+L+HK LN L+ HTGQ +E+IN DT+RDFFMSA EA++YGLID V++
Sbjct: 168 IEIQAKEILYHKHTLNTLLAQHTGQPIERINADTERDFFMSAAEAQEYGLIDQVILK 224
>gi|302035647|ref|YP_003795969.1| ATP-dependent Clp protease proteolytic subunit clpP [Candidatus
Nitrospira defluvii]
gi|300603711|emb|CBK40042.1| ATP-dependent Clp protease, proteolytic subunit clpP [Candidatus
Nitrospira defluvii]
Length = 211
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/188 (56%), Positives = 151/188 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D AN+I+AQLL+L+A DP KDI +Y+NSPGGSVTAG+
Sbjct: 15 RAYDIYSRLLKDRIIFLGAPIDDVFANLIIAQLLFLEAEDPEKDINLYINSPGGSVTAGL 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
I+DT+++++P ++T+C+G AASMGAFLL+AGTKGKRY+LPN+R+MIHQP+GG QG ++
Sbjct: 75 GIYDTMQYVKPAINTICLGQAASMGAFLLTAGTKGKRYALPNARVMIHQPMGGFQGQATE 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
ID+ A E+L + LN ++ HTGQ L+KI++DT+RD+FMS+EEAK YGLID V+ P K
Sbjct: 135 IDIHAREILKIRERLNEIMAKHTGQPLDKISQDTERDYFMSSEEAKRYGLIDEVITRPLK 194
Query: 291 ILQPVAAA 298
L+PV +
Sbjct: 195 SLKPVGST 202
>gi|291569895|dbj|BAI92167.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
Length = 236
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 144/177 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D++AN + AQ+L+L++ DP KDI +Y+NSPGGSVTAGM
Sbjct: 47 RAFDLYSRLLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQLYINSPGGSVTAGM 106
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
I+DT++ IRPDV T+C GLAASMGAFLL++GT GKR SLP+SRIMIHQPLGGAQG D
Sbjct: 107 GIYDTMQQIRPDVVTICYGLAASMGAFLLASGTAGKRMSLPSSRIMIHQPLGGAQGQAID 166
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++QA E+L+HK LN L+ HTGQ +E+IN DT+RDFFMSA EA++YGLID V++
Sbjct: 167 IEIQAKEILYHKHTLNTLLAQHTGQPIERINADTERDFFMSAAEAQEYGLIDQVILK 223
>gi|375084538|ref|ZP_09731403.1| ATP-dependent Clp protease proteolytic subunit [Megamonas
funiformis YIT 11815]
gi|374568042|gb|EHR39235.1| ATP-dependent Clp protease proteolytic subunit [Megamonas
funiformis YIT 11815]
Length = 198
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 108/180 (60%), Positives = 148/180 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP++D++AN+++AQLL+L++ DP+KDI +Y+NSPGG VTAG+
Sbjct: 16 RAYDIYSRLLKDRIIFLGGPIDDNVANVVIAQLLFLESEDPDKDIHLYINSPGGVVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G AASMG+ LL+AG KGKRY+LP SRIMIHQPLGGAQG +D
Sbjct: 76 AIYDTMQYIKPDVSTICIGQAASMGSVLLAAGAKGKRYALPYSRIMIHQPLGGAQGQSTD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I +QA E+L + LN LS HTGQ+++K+ EDT+RD FMSA EAK YGLID V++ P +
Sbjct: 136 IQIQAREILRIRETLNEILSRHTGQSVKKLTEDTERDNFMSALEAKKYGLIDEVIIRPQE 195
>gi|414075396|ref|YP_006994714.1| ATP-dependent ClpP protease [Anabaena sp. 90]
gi|413968812|gb|AFW92901.1| ATP-dependent ClpP protease [Anabaena sp. 90]
Length = 225
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +AN IVAQLL+LD+ D KDI +Y+NSPGGSV AGM
Sbjct: 42 RAFDIYSRLLRERIIFLGTPIDDVVANSIVAQLLFLDSEDAEKDIQLYINSPGGSVYAGM 101
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+ IRPDV T+C GLAASMGAFLL++GT GKR SLP+SRIMIHQPLGGAQG D
Sbjct: 102 AIYDTIQQIRPDVVTICFGLAASMGAFLLTSGTAGKRMSLPDSRIMIHQPLGGAQGQAID 161
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN +S HTGQ LE+I DT+RDFFMSAEEAK+YGLID V+
Sbjct: 162 IEIQAREILYIKGELNQLMSKHTGQPLERIETDTERDFFMSAEEAKNYGLIDQVI 216
>gi|56750021|ref|YP_170722.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|81300363|ref|YP_400571.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|1705929|sp|P54415.1|CLPP1_SYNE7 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|67460444|sp|Q5N665.1|CLPP1_SYNP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|755165|gb|AAC67306.1| ClpP [Synechococcus elongatus PCC 7942]
gi|56684980|dbj|BAD78202.1| ATP-dependent protease ClpP [Synechococcus elongatus PCC 6301]
gi|81169244|gb|ABB57584.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
elongatus PCC 7942]
Length = 197
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G PV D+AN IVAQLL+L+A DP KDI +Y+NSPGGSV G+
Sbjct: 14 RAFDIYSRLLRERIIFLGEPVTSDVANRIVAQLLFLEAEDPEKDIYLYINSPGGSVYDGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ HIRPDVSTVCVGLAASMGAFLL+AG KGKR SL +SRIMIHQPLGGAQG D
Sbjct: 74 GIFDTMNHIRPDVSTVCVGLAASMGAFLLAAGAKGKRTSLAHSRIMIHQPLGGAQGQAKD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QANE+L+ K NLN L+ TGQ L +I +DTDRDFFMSA EA +YGLID V+
Sbjct: 134 IEIQANEILYIKQNLNEVLAERTGQPLSRIEDDTDRDFFMSASEAVEYGLIDRVI 188
>gi|376004076|ref|ZP_09781843.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|375327546|emb|CCE17596.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
Length = 200
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 144/177 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D++AN + AQ+L+L++ DP KDI +Y+NSPGGSVTAGM
Sbjct: 11 RAFDLYSRLLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQLYINSPGGSVTAGM 70
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
I+DT++ IRPDV T+C GLAASMGAFLL++GT GKR SLP+SRIMIHQPLGGAQG D
Sbjct: 71 GIYDTMQQIRPDVVTICYGLAASMGAFLLASGTAGKRMSLPSSRIMIHQPLGGAQGQAID 130
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++QA E+L+HK LN L+ HTGQ +E+IN DT+RDFFMSA EA++YGLID V++
Sbjct: 131 IEIQAKEILYHKHTLNTLLAQHTGQPIERINADTERDFFMSAAEAQEYGLIDNVILK 187
>gi|332708809|ref|ZP_08428780.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
gi|332352351|gb|EGJ31920.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
Length = 230
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/175 (64%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V+D +A+ IVAQLLYL+A D KDI +Y+NSPGGSVTAGM
Sbjct: 41 RAFDIYSRLLRERIVFLGTQVDDVVADSIVAQLLYLEAEDEEKDIQLYINSPGGSVTAGM 100
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ +RPDV T+C GLAASMGAFLL+ G GKR +LPNSRIMIHQPLGGAQG D
Sbjct: 101 AIYDTMQQVRPDVVTICYGLAASMGAFLLAGGAAGKRMALPNSRIMIHQPLGGAQGQAVD 160
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+HK LN L+ HTGQ +E+I EDT+RDFFMSA EAKDYGLID V+
Sbjct: 161 IEIQAREILYHKQTLNQLLANHTGQPVEQIAEDTERDFFMSAAEAKDYGLIDQVI 215
>gi|409406436|ref|ZP_11254898.1| ATP-dependent Clp protease proteolytic subunit [Herbaspirillum sp.
GW103]
gi|386434985|gb|EIJ47810.1| ATP-dependent Clp protease proteolytic subunit [Herbaspirillum sp.
GW103]
Length = 208
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/175 (64%), Positives = 145/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GPV D MAN+IVAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 30 RAYDIYSRLLKERIIFLVGPVNDAMANLIVAQLLFLESENPDKDISLYINSPGGSVSAGM 89
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT++ I+P VST+C GLAASMGAFLL+AG KGKR+SLPNSRIMIHQPLGGAQG SD
Sbjct: 90 AIFDTMQFIKPQVSTLCTGLAASMGAFLLAAGAKGKRFSLPNSRIMIHQPLGGAQGQASD 149
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ + LN L+ TG+T+E+I++DTDRD FMSAE A +YGLID V+
Sbjct: 150 IEIQAREILYLRERLNTILAEKTGRTVEQISKDTDRDNFMSAEAAAEYGLIDQVL 204
>gi|409990366|ref|ZP_11273750.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis str. Paraca]
gi|291567407|dbj|BAI89679.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
gi|409938772|gb|EKN80052.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis str. Paraca]
Length = 200
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D+AN+IVAQLL+LDA DP KDI +Y+NSPGG V AG+
Sbjct: 14 RAFDIYSRLLRDRIVFLGTQVNSDVANLIVAQLLFLDAEDPEKDIYLYINSPGGGVNAGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ HIRPDV TVC+GLAASMGAFLLSAG KGKRYSLP+SRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNHIRPDVCTVCLGLAASMGAFLLSAGAKGKRYSLPHSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN L+ HT Q L +I EDT+RDFFMSAE+A +YGLID V+
Sbjct: 134 IEIQAREILYLKRQLNENLAKHTSQPLSRIEEDTERDFFMSAEDAVNYGLIDQVI 188
>gi|119485223|ref|ZP_01619608.1| Peptidase S14, ClpP [Lyngbya sp. PCC 8106]
gi|119457451|gb|EAW38576.1| Peptidase S14, ClpP [Lyngbya sp. PCC 8106]
Length = 238
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 141/172 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G ++D++AN + AQ+L+LDA DP KDI +Y+NSPGGSVTAGM I+
Sbjct: 52 DLYSRLLRDRIIFLGTAIDDEIANAVSAQMLFLDAEDPEKDIQLYINSPGGSVTAGMGIY 111
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DTI+ +RPDV T+C GLAASMGAFLLS+GTKGKR SLPNSR+MIHQPLGG QG DI++
Sbjct: 112 DTIQQVRPDVVTICYGLAASMGAFLLSSGTKGKRMSLPNSRVMIHQPLGGTQGQAVDIEI 171
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+HK LN L+ +TGQ +E+I DT+RDFFMSAEE+K+YGLID V+
Sbjct: 172 QAREILYHKRILNEILAQNTGQPIERIEVDTERDFFMSAEESKEYGLIDQVI 223
>gi|119491296|ref|ZP_01623350.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
gi|119453460|gb|EAW34622.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
Length = 203
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/171 (66%), Positives = 141/171 (82%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V D+AN+IVAQ+L+LDA DP KDI +Y+NSPGGSV+AG+ I+
Sbjct: 17 DIYSRLLRDRIIFLGQQVTADLANLIVAQMLFLDADDPEKDIYLYINSPGGSVSAGLGIY 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+ HIRPDVST+C+GLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG +DI++
Sbjct: 77 DTMNHIRPDVSTICIGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
QA E+L+ K LN L+ HTGQ + +I +DT+RDFFMSA+EA DYGLID V
Sbjct: 137 QAKEILYLKKRLNQSLADHTGQPMSRIEQDTERDFFMSAQEAVDYGLIDQV 187
>gi|423062476|ref|ZP_17051266.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis C1]
gi|406716384|gb|EKD11535.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis C1]
Length = 200
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D+AN+IVAQLL+LDA DP KDI +Y+NSPGG V AG+
Sbjct: 14 RAFDIYSRLLRDRIVFLGTQVNSDVANLIVAQLLFLDAEDPEKDIYLYINSPGGGVNAGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ HIRPDV TVC+GLAASMGAFLLSAG KGKRYSLP+SRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNHIRPDVCTVCLGLAASMGAFLLSAGAKGKRYSLPHSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN L+ HT Q L +I EDT+RDFFMSAE+A +YGLID V+
Sbjct: 134 IEIQAREILYLKRQLNENLAKHTEQPLSRIEEDTERDFFMSAEDAVNYGLIDQVI 188
>gi|81301334|ref|YP_401542.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|81170215|gb|ABB58555.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
elongatus PCC 7942]
Length = 244
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 142/178 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V+D +A+ IVAQLL+L+A DP KDI +Y+NSPGGSVTAGM
Sbjct: 54 RAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGM 113
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ + PDV+T+C GLAASMGAFLLS G +GKR +LP++RIMIHQPLGGAQG D
Sbjct: 114 AIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVD 173
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
I++QA E+L+HK+ LN L+ HTGQ LEKI DTDRDFFMS EEAK YGLID V+ P
Sbjct: 174 IEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVLTRP 231
>gi|209523050|ref|ZP_03271607.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
maxima CS-328]
gi|376001697|ref|ZP_09779556.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|209496637|gb|EDZ96935.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
maxima CS-328]
gi|375329926|emb|CCE15309.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
Length = 200
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D+AN+IVAQLL+LDA DP KDI +Y+NSPGG V AG+
Sbjct: 14 RAFDIYSRLLRDRIVFLGTQVNSDVANLIVAQLLFLDAEDPEKDIYLYINSPGGGVNAGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ HIRPDV TVC+GLAASMGAFLLSAG KGKRYSLP+SRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNHIRPDVCTVCLGLAASMGAFLLSAGAKGKRYSLPHSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN L+ HT Q L +I EDT+RDFFMSAE+A +YGLID V+
Sbjct: 134 IEIQAREILYLKRQLNENLAKHTEQPLSRIEEDTERDFFMSAEDAVNYGLIDQVI 188
>gi|25019682|gb|AAN71768.1| ClpP2 [Synechococcus elongatus PCC 7942]
Length = 302
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 141/175 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G V+D +A+ IVAQLL+L+A DP KDI +Y+NSPGGSVTAGMAI+
Sbjct: 115 DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIY 174
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ + PDV+T+C GLAASMGAFLLS G +GKR +LP++RIMIHQPLGGAQG DI++
Sbjct: 175 DTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEI 234
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
QA E+L+HK+ LN L+ HTGQ LEKI DTDRDFFMS EEAK YGLID V+ P
Sbjct: 235 QAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVLTRP 289
>gi|149926126|ref|ZP_01914388.1| ATP-dependent Clp protease proteolytic subunit [Limnobacter sp.
MED105]
gi|149824944|gb|EDM84156.1| ATP-dependent Clp protease proteolytic subunit [Limnobacter sp.
MED105]
Length = 215
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/202 (56%), Positives = 155/202 (76%), Gaps = 7/202 (3%)
Query: 84 LEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQL 143
LE + Y+P + + G G R ++ S+L + R+I GP+ D MAN+IVAQ+
Sbjct: 11 LETQGNMYVPMVIE-QSGRGE------RAYDIYSRLLKERVIFLVGPINDQMANVIVAQM 63
Query: 144 LYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGT 203
L+L++ +P+KDI +Y+NSPGGSV+AGMAI+DT++ I+PDVST+C GLAASMGAFLLS+GT
Sbjct: 64 LFLESENPDKDIALYINSPGGSVSAGMAIYDTMQFIKPDVSTLCTGLAASMGAFLLSSGT 123
Query: 204 KGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINED 263
KGKR+SLPNSRIMIHQPLGG QG SDI++ A E+L+ + LNG L+ +TG+T+E+I D
Sbjct: 124 KGKRFSLPNSRIMIHQPLGGVQGQASDIEIHAKEILYLREKLNGILADNTGKTIEEIARD 183
Query: 264 TDRDFFMSAEEAKDYGLIDGVV 285
TDRD FM A+ AK+YGLID V+
Sbjct: 184 TDRDNFMGADSAKEYGLIDDVL 205
>gi|56751593|ref|YP_172294.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|3023500|sp|O34125.1|CLPP2_SYNE7 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|67460442|sp|Q5N1P6.1|CLPP3_SYNP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|15620530|gb|AAL03914.1|U30252_2 ClpP2 [Synechococcus elongatus PCC 7942]
gi|2351823|gb|AAB68677.1| ATP-dependent Clp protease, proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|56686552|dbj|BAD79774.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
Length = 240
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 141/175 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G V+D +A+ IVAQLL+L+A DP KDI +Y+NSPGGSVTAGMAI+
Sbjct: 53 DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIY 112
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ + PDV+T+C GLAASMGAFLLS G +GKR +LP++RIMIHQPLGGAQG DI++
Sbjct: 113 DTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEI 172
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
QA E+L+HK+ LN L+ HTGQ LEKI DTDRDFFMS EEAK YGLID V+ P
Sbjct: 173 QAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVLTRP 227
>gi|392959640|ref|ZP_10325122.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans DSM 17108]
gi|421052494|ref|ZP_15515483.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelosinus
fermentans B4]
gi|421058665|ref|ZP_15521332.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans B3]
gi|421066386|ref|ZP_15528000.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A12]
gi|421070550|ref|ZP_15531682.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A11]
gi|392443225|gb|EIW20776.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelosinus
fermentans B4]
gi|392448176|gb|EIW25379.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A11]
gi|392456193|gb|EIW32947.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans DSM 17108]
gi|392456278|gb|EIW33029.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A12]
gi|392460320|gb|EIW36635.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans B3]
Length = 201
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 146/180 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP++D++AN+++AQLL+L++ DP KDI +Y+NSPGG VTAG+
Sbjct: 16 RSYDIFSRLLKDRIIFIGGPIDDNVANLVIAQLLFLESEDPEKDIHVYINSPGGVVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G AASMGA LL+AG KGKRY+LP +RIMIHQPLGG QG +D
Sbjct: 76 AIYDTMQYIKPDVSTICLGSAASMGALLLTAGAKGKRYALPYARIMIHQPLGGTQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ A E+L + LNG L HTGQT +KI DT+RDFFMSAE+AK+YGLID VV+ K
Sbjct: 136 IEIHAREILRLRELLNGILIQHTGQTKDKIEHDTERDFFMSAEQAKEYGLIDAVVVRGEK 195
>gi|374339257|ref|YP_005095993.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinitoga
piezophila KA3]
gi|372100791|gb|AEX84695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinitoga
piezophila KA3]
Length = 198
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 152/194 (78%), Gaps = 6/194 (3%)
Query: 104 PPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIM 157
P P+++ GR++ ++ S+L + RII G V D ++N+IVAQ+L+L+A DP KDI +
Sbjct: 4 PIPVVVESSGRYERAYDIYSRLLKDRIIFLGSEVNDYVSNLIVAQMLFLEAQDPEKDIYL 63
Query: 158 YLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMI 217
Y+NSPGGS+TAG+AI+DT+++I+PDVST+C+G AASMGA LL+AG KGKR++LPNSRIMI
Sbjct: 64 YINSPGGSITAGLAIYDTMQYIKPDVSTICIGQAASMGAVLLTAGAKGKRFALPNSRIMI 123
Query: 218 HQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKD 277
HQP GGAQG DI++QA E+L K LN LS HTG+ + +I +D DRDFFMSAEEAK+
Sbjct: 124 HQPWGGAQGTAKDIEIQAQEILRMKKMLNKILSEHTGKDVSQIEKDADRDFFMSAEEAKE 183
Query: 278 YGLIDGVVMNPHKI 291
YGLID V+ + +I
Sbjct: 184 YGLIDKVIKSRKEI 197
>gi|251772219|gb|EES52789.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Leptospirillum ferrodiazotrophum]
Length = 201
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 109/181 (60%), Positives = 149/181 (82%), Gaps = 1/181 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +AN+++AQ+L+L++ D +KDI +Y+NSPGG VTAG+
Sbjct: 15 RAYDIYSRLLRDRIIILGTPIDDTVANLVIAQMLFLESEDSSKDINLYINSPGGIVTAGL 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+ I+PDVST+C+G AASMGAFLLSAG KGKRY+LPN+RIMIHQP+GG QG +D
Sbjct: 75 AIYDTIKFIKPDVSTICIGQAASMGAFLLSAGAKGKRYALPNARIMIHQPMGGFQGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ A E+L KA+LN +S H GQ +EK+ +DTDRD+FMSA+EAKDYGLID V+ + H+
Sbjct: 135 IEIHAREILKLKADLNRMMSEHCGQPVEKVAQDTDRDYFMSAKEAKDYGLIDSVITS-HR 193
Query: 291 I 291
I
Sbjct: 194 I 194
>gi|253826954|ref|ZP_04869839.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
canadensis MIT 98-5491]
gi|313142738|ref|ZP_07804931.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
canadensis MIT 98-5491]
gi|253510360|gb|EES89019.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
canadensis MIT 98-5491]
gi|313131769|gb|EFR49386.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
canadensis MIT 98-5491]
Length = 196
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 111/180 (61%), Positives = 144/180 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D +A IV+QLL+L+A DP KDI +Y+NSPGG VT+G+
Sbjct: 17 RSYDIYSRLLKDRIIMLSGQIDDGVAASIVSQLLFLEAEDPQKDIYLYINSPGGVVTSGL 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ +I+PD+ T+C+G AASMGAFLLS GTKGKRYSLPNSRIMIHQPLGGAQG +D
Sbjct: 77 SIYDTMNYIKPDICTICIGQAASMGAFLLSCGTKGKRYSLPNSRIMIHQPLGGAQGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L KA LN L+ +T Q+LEKI +DTDRDFFMSA+EAKDYGLID ++ K
Sbjct: 137 IEIQAKEILRLKATLNEILADNTNQSLEKIAKDTDRDFFMSAKEAKDYGLIDNILTKSLK 196
>gi|443320140|ref|ZP_21049261.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gloeocapsa
sp. PCC 73106]
gi|442790136|gb|ELR99748.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gloeocapsa
sp. PCC 73106]
Length = 233
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 122/225 (54%), Positives = 163/225 (72%), Gaps = 10/225 (4%)
Query: 65 SSLDDCESTWK-GIWSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHR 123
SS+ +S +K I S++ND + + +P EQ G L R ++ S+L + R
Sbjct: 6 SSVPSTQSHYKPEIQSVKNDPTIKN--IVPMVL--EQSG-----LGERAFDIYSRLLRER 56
Query: 124 IIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDV 183
II G P++D +AN + AQLL+L+A D KDI +Y+NSPGGSV AGMAI+DT+R + PDV
Sbjct: 57 IIFIGTPIDDTLANSVTAQLLFLEAEDSEKDIQIYINSPGGSVYAGMAIYDTMRQVAPDV 116
Query: 184 STVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKA 243
+T+C G+AASMGAFLLS GT GKR +LPN+R+MIHQPLGGAQG SDI +QA E+L+ K
Sbjct: 117 ATICYGIAASMGAFLLSGGTNGKRMALPNARMMIHQPLGGAQGQASDIQIQAREILYIKK 176
Query: 244 NLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
LN L+ HTGQTLEK++ DT+RDF+MS+E+AK+YGLID V+ P
Sbjct: 177 RLNQLLAEHTGQTLEKVSMDTERDFYMSSEKAKEYGLIDQVIHKP 221
>gi|222100864|ref|YP_002535432.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
neapolitana DSM 4359]
gi|221573254|gb|ACM24066.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
neapolitana DSM 4359]
Length = 200
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 147/179 (82%), Gaps = 3/179 (1%)
Query: 110 GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSV 166
GR++ ++ S+L + RI+ G P++D +AN+++AQLL+L+A DP+KD+ +Y+NSPGGSV
Sbjct: 19 GRYERAYDIFSRLLKDRIVFLGSPIDDHVANLVIAQLLFLEAEDPDKDVYLYINSPGGSV 78
Query: 167 TAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQG 226
TAG+AI+DT+++I+ DVST+CVG AASM A LL+AGTKGKRY+LPN+RIMIHQPLGGA+G
Sbjct: 79 TAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGTKGKRYALPNARIMIHQPLGGAEG 138
Query: 227 GQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
D+++ E+L K LN LS HTGQ +EKI +DTDRDFFMSAEEAK+YG++D VV
Sbjct: 139 PAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 197
>gi|408417896|ref|YP_006759310.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacula
toluolica Tol2]
gi|405105109|emb|CCK78606.1| ClpP: ATP-dependent Clp protease, proteolytic subunit
[Desulfobacula toluolica Tol2]
Length = 207
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 113/202 (55%), Positives = 149/202 (73%), Gaps = 7/202 (3%)
Query: 90 PYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAV 149
P IP + G R ++ S+L + RII G ++D++AN+IVAQ L+L++
Sbjct: 2 PLIPMVVEQSNRGE-------RAYDIYSRLLKDRIIFIGSAIDDEIANLIVAQFLFLESE 54
Query: 150 DPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS 209
DP KDI Y+NSPGG VTAGMAI+DT+++I+PDV+TVC+G AASMGA LL+AGTKGKR++
Sbjct: 55 DPEKDISFYINSPGGVVTAGMAIYDTMQYIKPDVATVCIGQAASMGALLLTAGTKGKRFA 114
Query: 210 LPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFF 269
LPNSRIMIHQPLGG QG +DI +QANE+L K LN LS HTGQ +EK++ DT+RDFF
Sbjct: 115 LPNSRIMIHQPLGGTQGQATDIKIQANEILRMKDILNEILSTHTGQDIEKVSADTERDFF 174
Query: 270 MSAEEAKDYGLIDGVVMNPHKI 291
MSA EA YG++D VV + ++
Sbjct: 175 MSATEAMKYGIVDKVVTDRSEL 196
>gi|388257267|ref|ZP_10134446.1| ATP-dependent Clp protease proteolytic subunit [Cellvibrio sp. BR]
gi|387938434|gb|EIK44986.1| ATP-dependent Clp protease proteolytic subunit [Cellvibrio sp. BR]
Length = 208
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 149/183 (81%), Gaps = 3/183 (1%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I GPVED MAN++VAQLL+L+A +P+KDI +Y+NSPGGSVTAGM+I+
Sbjct: 28 DIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPDKDIHLYINSPGGSVTAGMSIY 87
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G A SMGAFLL+AGTKGKR+ LPNSR+MIHQP GGAQG SDI +
Sbjct: 88 DTMQFIKPDVSTMCIGQACSMGAFLLNAGTKGKRFCLPNSRVMIHQPSGGAQGQASDIHI 147
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQ 293
QA E+L ++ LN +++H+GQ +EKI DT+RD FMSA++AKDYGLID V+ + +Q
Sbjct: 148 QAQEILKIRSRLNELMAFHSGQPIEKIELDTERDNFMSAQQAKDYGLIDSVI---ERRVQ 204
Query: 294 PVA 296
P A
Sbjct: 205 PAA 207
>gi|300311895|ref|YP_003775987.1| ATP-dependent Clp protease proteolytic subunit [Herbaspirillum
seropedicae SmR1]
gi|124483356|emb|CAM32551.1| ATP-dependent Clp protease (proteolytic subunit) protein
[Herbaspirillum seropedicae]
gi|300074680|gb|ADJ64079.1| ATP-dependent Clp protease (proteolytic subunit) protein
[Herbaspirillum seropedicae SmR1]
Length = 208
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 145/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GPV D MAN+IVAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 30 RAYDIYSRLLKERIIFLVGPVNDAMANLIVAQLLFLESENPDKDISLYINSPGGSVSAGM 89
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT++ I+P VST+C GLAASMGAFLL+AG KGKR+SLPNSRIMIHQPLGGAQG SD
Sbjct: 90 AIFDTMQFIKPQVSTLCTGLAASMGAFLLAAGAKGKRFSLPNSRIMIHQPLGGAQGQASD 149
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ + LN L+ TG+T+E+I++DTDRD FMSA+ A +YGLID V+
Sbjct: 150 IEIQAREILYLRERLNTILAEKTGRTVEQISKDTDRDNFMSADAAAEYGLIDKVL 204
>gi|218440358|ref|YP_002378687.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanothece sp.
PCC 7424]
gi|218173086|gb|ACK71819.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7424]
Length = 203
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 116/190 (61%), Positives = 145/190 (76%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V +D+AN IVAQLL+L++ DP+KDI +Y+NSPGGSV+AG+
Sbjct: 14 RAFDIYSRLLRDRIVFLGQEVTNDLANTIVAQLLFLESEDPDKDIYLYINSPGGSVSAGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ IRPDV T+C+GLAASMGAFLL AG K KR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNQIRPDVCTICIGLAASMGAFLLCAGAKDKRMSLPNSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L+ K LN +L+ TGQ LEKI EDT+RDFFMSAEEA++YGLID V+
Sbjct: 134 IEIQAKEILYLKGLLNQHLASRTGQPLEKIAEDTERDFFMSAEEAQEYGLIDQVINRRPS 193
Query: 291 ILQPVAAAAG 300
P A G
Sbjct: 194 ASNPPPVAVG 203
>gi|405363134|ref|ZP_11026132.1| ATP-dependent Clp protease proteolytic subunit [Chondromyces
apiculatus DSM 436]
gi|397090077|gb|EJJ20963.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 203
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 113/189 (59%), Positives = 150/189 (79%), Gaps = 1/189 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G PV DD+ANIIVAQLL+L++ DP+K I +Y+NSPGGSVTAG+
Sbjct: 15 RAYDLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPGGSVTAGL 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++++ VST+CVG AASMGA LL AG KGKRY+LPNSRIMIHQPLGGAQG +D
Sbjct: 75 AIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIHQPLGGAQGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
ID+QA E+L ++ +NG + HTG T+E+I +DT+RD+FMSAE+A+ YGLID VV +
Sbjct: 135 IDIQAKEILRLRSYINGLIVKHTGHTVERIEKDTERDYFMSAEDARQYGLIDEVV-EKQR 193
Query: 291 ILQPVAAAA 299
++ P A A
Sbjct: 194 VITPTPAPA 202
>gi|108757731|ref|YP_634562.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus xanthus
DK 1622]
gi|3023519|sp|O30612.1|CLPP2_MYXXD RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|2384690|gb|AAB97819.1| proteosome major subunit [Myxococcus xanthus DK 1622]
gi|108461611|gb|ABF86796.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Myxococcus
xanthus DK 1622]
Length = 203
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 113/189 (59%), Positives = 150/189 (79%), Gaps = 1/189 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G PV DD+ANIIVAQLL+L++ DP+K I +Y+NSPGGSVTAG+
Sbjct: 15 RAYDLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPGGSVTAGL 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++++ VST+CVG AASMGA LL AG KGKRY+LPNSRIMIHQPLGGAQG +D
Sbjct: 75 AIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIHQPLGGAQGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
ID+QA E+L ++ +NG + HTG T+E+I +DT+RD+FMSAE+A+ YGLID VV +
Sbjct: 135 IDIQAKEILRLRSYINGLIVKHTGHTIERIEKDTERDYFMSAEDARQYGLIDEVV-EKQR 193
Query: 291 ILQPVAAAA 299
++ P A A
Sbjct: 194 VIAPTPAPA 202
>gi|260887080|ref|ZP_05898343.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|330839143|ref|YP_004413723.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|402833991|ref|ZP_10882598.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. CM52]
gi|260863142|gb|EEX77642.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|329746907|gb|AEC00264.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|402279060|gb|EJU28103.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. CM52]
Length = 206
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 148/184 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ GGP++D++AN++VAQLL+L++ DP+KDI +Y+NSPGG VTAG+
Sbjct: 21 RAYDIYSRLLKDRIVFVGGPIDDNVANVVVAQLLFLESEDPDKDIHLYINSPGGVVTAGL 80
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++IRPDVST+C+G AASMG+ LL+AG KGKRY+LP +RIMIHQPLGGAQG +D
Sbjct: 81 AIYDTMQYIRPDVSTICIGQAASMGSLLLTAGAKGKRYALPLARIMIHQPLGGAQGQSTD 140
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I +QA E+L + N L+ HTGQ EK+ DT+RD FM+AEEAK+YGLID V+ P K
Sbjct: 141 IQIQAKEILRLREVGNDILAKHTGQPREKLIADTERDNFMTAEEAKEYGLIDEVITRPVK 200
Query: 291 ILQP 294
I +P
Sbjct: 201 IEKP 204
>gi|421521992|ref|ZP_15968641.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
LS46]
gi|402754253|gb|EJX14738.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
LS46]
Length = 213
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 115/200 (57%), Positives = 150/200 (75%), Gaps = 6/200 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN++VAQLL
Sbjct: 6 YIQQSSDIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+AG K
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAK 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKR+ LPNSR+MIHQPLGG QG +DI++ A E+L+ KA LN L+YHTGQ LE I DT
Sbjct: 126 GKRHCLPNSRVMIHQPLGGFQGQATDIEIHAQEILNIKARLNELLAYHTGQELETIKRDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGV 284
+RD FMSA A +YGLID V
Sbjct: 186 ERDNFMSASRAAEYGLIDSV 205
>gi|238926240|ref|ZP_04658000.1| endopeptidase Clp [Selenomonas flueggei ATCC 43531]
gi|238885920|gb|EEQ49558.1| endopeptidase Clp [Selenomonas flueggei ATCC 43531]
Length = 197
Score = 236 bits (602), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 110/178 (61%), Positives = 145/178 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP++D +AN+IVAQ+L+L++ DP+KDI +Y+NSPGG VTAG+
Sbjct: 11 RAYDIYSRLLKERIIFLGGPIDDSVANVIVAQMLFLESEDPDKDIHLYINSPGGVVTAGL 70
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG AASMG+ LL+AG KGKRY+LP++RIMIHQPLGGAQG +D
Sbjct: 71 AIYDTMQYIKPDVSTICVGQAASMGSILLTAGAKGKRYALPHARIMIHQPLGGAQGQSTD 130
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
I +QA E+L + N L+ HTGQ KIN DT+RD FMSAEEAK+YGLID VV+ P
Sbjct: 131 IQIQAKEILRLREVGNEILARHTGQDTAKINIDTERDNFMSAEEAKEYGLIDEVVLRP 188
>gi|172039352|ref|YP_001805853.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. ATCC
51142]
gi|354552381|ref|ZP_08971689.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. ATCC 51472]
gi|171700806|gb|ACB53787.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
gi|353555703|gb|EHC25091.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. ATCC 51472]
Length = 229
Score = 236 bits (602), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 140/178 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G PV+D +A+ IVAQLL+LDA DP KDI +Y+NSPGGSV AG+
Sbjct: 39 RAFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGL 98
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ IRPDV T+C GLAASMGAFLLS G KGKR +LP+SRIMIHQPLGGAQG +
Sbjct: 99 AIYDTMQQIRPDVVTICFGLAASMGAFLLSGGAKGKRMALPSSRIMIHQPLGGAQGQAVE 158
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
I++QA E+L+ K LN L+ HTGQ LE I DT+RDFFMSA+EA DYGLID V+ P
Sbjct: 159 IEIQAKEILYIKKRLNDMLAEHTGQPLETIAADTERDFFMSAQEAVDYGLIDQVISRP 216
>gi|427706272|ref|YP_007048649.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
gi|427358777|gb|AFY41499.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
Length = 232
Score = 236 bits (602), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D +AN IVAQLL+LD+ D KDI +Y+NSPGGSV AGM
Sbjct: 42 RAFDIYSRLLRERIIFLGTAIDDTVANSIVAQLLFLDSEDAEKDIQLYINSPGGSVYAGM 101
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+ IRP+V T+C GLAASMGAFLL+AGT GKR SLP+SRIMIHQPLGGAQG D
Sbjct: 102 AIYDTIQQIRPNVVTICFGLAASMGAFLLAAGTAGKRMSLPDSRIMIHQPLGGAQGQAID 161
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN L++HTGQ LE++ DTDRDFFMSAEEAK+YGLID V+
Sbjct: 162 IEIQAREILYIKGQLNQLLAHHTGQPLERLEADTDRDFFMSAEEAKNYGLIDQVI 216
>gi|398847904|ref|ZP_10604778.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM84]
gi|398250862|gb|EJN36154.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM84]
Length = 213
Score = 236 bits (602), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 115/200 (57%), Positives = 150/200 (75%), Gaps = 6/200 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN++VAQLL
Sbjct: 6 YIQQSSDIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+AG K
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAK 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKR+ LPNSR+MIHQPLGG QG +DI++ A E+L+ KA LN L+YHTGQ LE I DT
Sbjct: 126 GKRHCLPNSRVMIHQPLGGFQGQATDIEIHAQEILNIKARLNELLAYHTGQELETIKRDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGV 284
+RD FMSA A +YGLID V
Sbjct: 186 ERDNFMSASRAAEYGLIDSV 205
>gi|442319289|ref|YP_007359310.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
gi|441486931|gb|AGC43626.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
Length = 206
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 108/182 (59%), Positives = 148/182 (81%), Gaps = 1/182 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++DD+AN+IVAQLL+L++ DP+KDI +Y+NSPGGSVTAGM
Sbjct: 18 RSYDIYSRLLKDRIIMLGTEIDDDVANVIVAQLLFLESEDPDKDINIYINSPGGSVTAGM 77
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++++P VST+CVG AASMGA LL AGTKGKRY+LP+SRIMIHQPLGG +G +D
Sbjct: 78 AIYDTMQYVKPPVSTICVGQAASMGAVLLLAGTKGKRYALPSSRIMIHQPLGGVRGQATD 137
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L KA LN + HTGQ++E++ +DTDRD+FM A EAK YG++D + NP K
Sbjct: 138 IEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMGATEAKAYGIVDE-IQNPRK 196
Query: 291 IL 292
++
Sbjct: 197 VV 198
>gi|26989024|ref|NP_744449.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
KT2440]
gi|148548677|ref|YP_001268779.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
F1]
gi|339486803|ref|YP_004701331.1| ATP-dependent Clp protease, proteolytic subunit [Pseudomonas putida
S16]
gi|395444305|ref|YP_006384558.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
ND6]
gi|421530071|ref|ZP_15976578.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
S11]
gi|431801808|ref|YP_007228711.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
HB3267]
gi|38257487|sp|Q88KJ0.1|CLPP_PSEPK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214701|sp|A5W635.1|CLPP_PSEP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|24983847|gb|AAN67913.1|AE016423_8 ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
putida KT2440]
gi|148512735|gb|ABQ79595.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudomonas
putida F1]
gi|171362771|dbj|BAG15849.1| probable ATP-dependent clp protease [Pseudomonas putida]
gi|338837646|gb|AEJ12451.1| ATP-dependent Clp protease, proteolytic subunit [Pseudomonas putida
S16]
gi|388558302|gb|AFK67443.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
ND6]
gi|402212478|gb|EJT83868.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
S11]
gi|430792573|gb|AGA72768.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
HB3267]
Length = 213
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/200 (57%), Positives = 150/200 (75%), Gaps = 6/200 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN++VAQLL
Sbjct: 6 YIQQSSDIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+AG K
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAK 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKR+ LPNSR+MIHQPLGG QG +DI++ A E+L+ KA LN L+YHTGQ LE I DT
Sbjct: 126 GKRHCLPNSRVMIHQPLGGFQGQATDIEIHAQEILNIKARLNELLAYHTGQDLETIKRDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGV 284
+RD FMSA A +YGLID V
Sbjct: 186 ERDNFMSASRAAEYGLIDSV 205
>gi|296134054|ref|YP_003641301.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermincola
potens JR]
gi|296032632|gb|ADG83400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermincola
potens JR]
Length = 194
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 145/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP++D +AN+++AQ+L+L+A DP+KDI +Y+NSPGG VTAGM
Sbjct: 16 RAYDIYSRLLKDRIIFIGGPIDDMVANLVIAQMLFLEAEDPDKDIHIYINSPGGVVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G AASMG+FLL+AGTKGKRY+LP +RIMIHQPLGG QG +D
Sbjct: 76 AIYDTMQYIKPDVSTICMGQAASMGSFLLAAGTKGKRYALPYTRIMIHQPLGGVQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
ID+ A E+L K+ LN L+ HTGQ +E I DT+RDFFMSAEEA+ YG++D V+
Sbjct: 136 IDIHAKEILRMKSVLNELLAKHTGQPVEVIARDTERDFFMSAEEARKYGIVDEVI 190
>gi|442323969|ref|YP_007363990.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
gi|441491611|gb|AGC48306.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
Length = 203
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/188 (59%), Positives = 149/188 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G PV DD+ANIIVAQLL+L++ DP+K I +Y+NSPGGSVTAG+
Sbjct: 15 RAYDLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPGGSVTAGL 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++++ VST+CVG AASMGA LL AG KGKRY+LPNSRIMIHQPLGGAQG +D
Sbjct: 75 AIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIHQPLGGAQGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
ID+QA E+L ++ LNG + HTG ++E+I +DT+RD+FMSAE+A+ YG+ID VV +
Sbjct: 135 IDIQAKEILRLRSYLNGLIVKHTGHSIERIEKDTERDYFMSAEDARQYGIIDEVVEKQQR 194
Query: 291 ILQPVAAA 298
+ P +A
Sbjct: 195 LSAPAPSA 202
>gi|260892392|ref|YP_003238489.1| ATP-dependent Clp protease proteolytic subunit [Ammonifex degensii
KC4]
gi|260864533|gb|ACX51639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ammonifex
degensii KC4]
Length = 200
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 144/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP++D +AN+++AQLL+L+A DP KDI +Y+NSPGG VTAGM
Sbjct: 18 RAYDIYSRLLKDRIIFIGGPIDDHLANLVIAQLLFLEAEDPEKDIHLYINSPGGLVTAGM 77
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++IRPDVST+C+G AASM AFLL+AG KGKRY+LP +RIM+HQPLGG QG ++
Sbjct: 78 AIYDTMQYIRPDVSTICLGQAASMAAFLLAAGAKGKRYALPYARIMLHQPLGGFQGQATE 137
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
+++ A E++ + LN LS HTGQ +EKI +DTDRDFFM+A++AKDYGLID V+
Sbjct: 138 VEIHAREIMRMRQVLNELLSKHTGQPVEKIAQDTDRDFFMTAQQAKDYGLIDEVI 192
>gi|160902469|ref|YP_001568050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Petrotoga
mobilis SJ95]
gi|160360113|gb|ABX31727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Petrotoga
mobilis SJ95]
Length = 205
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 151/188 (80%), Gaps = 6/188 (3%)
Query: 104 PPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIM 157
P P+++ GR++ ++ S+L + RI+ G P+ DD+AN+I+AQLL+L++ DP+KDI +
Sbjct: 4 PMPVVIETEGRYERAYDIYSRLLKDRIVFLGTPINDDVANVIIAQLLFLESQDPDKDIFL 63
Query: 158 YLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMI 217
Y+NSPGGSVT+G+ I+DT+++++PD+ST+C+G AASMGA LL+AG KGKRYSLP SRIMI
Sbjct: 64 YINSPGGSVTSGLGIYDTMQYVKPDISTICIGQAASMGAVLLAAGAKGKRYSLPYSRIMI 123
Query: 218 HQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKD 277
HQP GGA+G DI + A E+L K +LN LS HTGQ+LEKI +DT+RDFFM+A+EA +
Sbjct: 124 HQPWGGAEGTAIDIQIHAREILRLKDDLNNILSKHTGQSLEKIEKDTERDFFMNAQEALN 183
Query: 278 YGLIDGVV 285
YGLID V+
Sbjct: 184 YGLIDKVI 191
>gi|363890989|ref|ZP_09318283.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium CM5]
gi|363893165|ref|ZP_09320304.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium CM2]
gi|363895295|ref|ZP_09322293.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium ACC19a]
gi|402838212|ref|ZP_10886724.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eubacteriaceae bacterium OBRC8]
gi|361957733|gb|EHL11038.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium ACC19a]
gi|361961689|gb|EHL14872.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium CM2]
gi|361962756|gb|EHL15865.1| ATP-dependent Clp protease proteolytic subunit [Eubacteriaceae
bacterium CM5]
gi|402273716|gb|EJU22911.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eubacteriaceae bacterium OBRC8]
Length = 200
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 107/181 (59%), Positives = 144/181 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D A+++VAQLL+L++ DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RSYDIYSRLLKDRIIFLGDEVNDQTASLVVAQLLFLESEDPDKDISLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI++I+PDVST+C+G+AASMGAFLL+ GTKGKR++LPNS IMIHQPLGG +G +D
Sbjct: 76 AIYDTIQYIKPDVSTICIGMAASMGAFLLNCGTKGKRFALPNSEIMIHQPLGGTRGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I + A ++ + NLN ++ TGQ +E IN DT+RDFFMSAEEAK YGLID V+ N +K
Sbjct: 136 IKIHAERIIKMRENLNQIMAERTGQPIEVINRDTERDFFMSAEEAKQYGLIDDVITNRNK 195
Query: 291 I 291
+
Sbjct: 196 V 196
>gi|126659496|ref|ZP_01730629.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
gi|126619230|gb|EAZ89966.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
Length = 201
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 141/178 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G PV+D +A+ IVAQLL+LDA DP KDI +Y+NSPGGSV AG+
Sbjct: 11 RAFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQIYINSPGGSVYAGL 70
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ IRPDV T+C GLAASMGAFLLS GTKGKR +LP+SRIMIHQPLGGAQG +
Sbjct: 71 AIYDTMQQIRPDVVTICFGLAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGAQGQAVE 130
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
I++QA E+L+ K LN L+ HTGQ +KI DT+RDFFMSA+EA DYGLID V+ P
Sbjct: 131 IEIQAKEILYIKKRLNDMLAEHTGQPYDKIATDTERDFFMSAQEAVDYGLIDKVISRP 188
>gi|428771131|ref|YP_007162921.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
gi|428685410|gb|AFZ54877.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
Length = 239
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/173 (64%), Positives = 141/173 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G ++D +A+ IVAQLLYL+A DP KDI +Y+NSPGGSV AGMAI+
Sbjct: 48 DIYSRLLRERIIFLGTAIDDKLADSIVAQLLYLEADDPEKDIYIYINSPGGSVYAGMAIY 107
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C G+AASMGAFLLS G KGKR LPNSRIMIHQPLGGAQG SDI++
Sbjct: 108 DTMQQIKPDVSTICYGIAASMGAFLLSGGAKGKRLGLPNSRIMIHQPLGGAQGQASDIEI 167
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVM 286
QA E+L+ K LN L+ HTGQ LEKI+ DT+RDF+MS+ EA++YGLID V++
Sbjct: 168 QAKEILYIKNKLNQLLADHTGQPLEKISLDTERDFYMSSTEAQEYGLIDEVII 220
>gi|218247705|ref|YP_002373076.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|257060958|ref|YP_003138846.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
gi|218168183|gb|ACK66920.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|256591124|gb|ACV02011.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
Length = 229
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 140/176 (79%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G PV+D +A+ IVAQLL+LDA DP KDI +Y+NSPGGSV AG+AI+
Sbjct: 42 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIY 101
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ IRPDV+T+C GLAASMGAFLL G GKR +LP+SRIMIHQPLGGAQG +I++
Sbjct: 102 DTMQQIRPDVATICFGLAASMGAFLLCGGAPGKRMALPSSRIMIHQPLGGAQGQAVEIEI 161
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPH 289
QA E+L+ K LN L+ HTGQ + I EDT+RDFFMSA+EAK+YGLID V+ PH
Sbjct: 162 QAKEILYIKRRLNEMLASHTGQPFDTIAEDTERDFFMSAQEAKEYGLIDKVISRPH 217
>gi|34558484|ref|NP_908299.1| ATP-dependent Clp protease proteolytic subunit [Wolinella
succinogenes DSM 1740]
gi|60389700|sp|Q7M7M3.1|CLPP_WOLSU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|34481778|emb|CAE11199.1| ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT [Wolinella
succinogenes]
Length = 195
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/200 (57%), Positives = 152/200 (76%), Gaps = 7/200 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
YIP Y + G G R ++ S+L + RII G + D +A+ IV+Q+L+L+A D
Sbjct: 3 YIP-YVIEKTGRGE------RSYDIYSRLLKDRIIMLSGEINDGVASSIVSQMLFLEAED 55
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P KDI +Y+NSPGG +T+GM+I+DT+ +++PD+ T+C+G AASMGAFLLS GTKGKR+SL
Sbjct: 56 PEKDIYLYINSPGGVITSGMSIYDTMNYVKPDICTICIGQAASMGAFLLSCGTKGKRFSL 115
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
PNSRIMIHQPLGGAQG +DI++QA E+L K+ LNG L+ +TGQ LEKI +DTDRDFFM
Sbjct: 116 PNSRIMIHQPLGGAQGQATDIEIQAKEILRLKSILNGILASNTGQPLEKIAKDTDRDFFM 175
Query: 271 SAEEAKDYGLIDGVVMNPHK 290
SA+E+K+YGLID V+ K
Sbjct: 176 SAQESKEYGLIDNVLEKSFK 195
>gi|225175200|ref|ZP_03729196.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dethiobacter
alkaliphilus AHT 1]
gi|225169376|gb|EEG78174.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dethiobacter
alkaliphilus AHT 1]
Length = 193
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 145/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D++AN+++AQLL+L++ DP KDI +Y+NSPGGSV AG+
Sbjct: 16 RAYDIYSRLLKDRIIFIGSPIDDNVANLVIAQLLFLESEDPEKDINIYVNSPGGSVYAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVGLAASMGA LL+AG GKR+SLPNSRIM+HQPLGGAQG D
Sbjct: 76 AIYDTMQYIKPDVSTICVGLAASMGAVLLAAGADGKRFSLPNSRIMVHQPLGGAQGQAVD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L + LN LS HTG+ +E+I DTDRD+FMSAE+AK+YGLIDGV+
Sbjct: 136 IEIHAKEILRIRERLNEILSGHTGKPVEQIARDTDRDYFMSAEQAKEYGLIDGVL 190
>gi|121605848|ref|YP_983177.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Polaromonas
naphthalenivorans CJ2]
gi|120594817|gb|ABM38256.1| ATP-dependent Clp protease proteolytic subunit ClpP [Polaromonas
naphthalenivorans CJ2]
Length = 216
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/196 (58%), Positives = 155/196 (79%), Gaps = 6/196 (3%)
Query: 96 AQGEQGGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAV 149
+Q QG G PM++ GR + ++ S+L + R+I GPV D AN++VAQLL+L++
Sbjct: 17 SQEIQGLGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDQTANLVVAQLLFLESE 76
Query: 150 DPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS 209
+P+KDI Y+NSPGGSVTAGMAI+DT++ I+PDVST+CVG+AASMGAFLLS+GTKGKR+S
Sbjct: 77 NPDKDISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCVGMAASMGAFLLSSGTKGKRFS 136
Query: 210 LPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFF 269
LPNSR+MIHQP GGAQG SDI++ A ++L + LN L+++TGQT+EKI DT+RD+F
Sbjct: 137 LPNSRVMIHQPSGGAQGQASDIEIHARDILKTRDQLNRILAHNTGQTVEKIERDTERDYF 196
Query: 270 MSAEEAKDYGLIDGVV 285
M A+EAK YG++D V+
Sbjct: 197 MFADEAKAYGVVDQVI 212
>gi|334139130|ref|ZP_08512526.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
gi|333603020|gb|EGL14444.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
Length = 200
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G PV D +AN I+AQLL+LDA DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIFLGTPVNDQVANAIIAQLLFLDAQDPDKDIHLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+ DVST+CVG+AASMGAFLL+AG KGKRY+LPNS +MIHQPLGGA+G +D
Sbjct: 76 AIYDTMQFIKSDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGAEGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I+++A +L + NLN L+ TGQ LE+I++DTDRD+FMSA EA YGLID V+
Sbjct: 136 IEIRARRILKMRENLNKILAERTGQPLERIDKDTDRDYFMSAAEASAYGLIDKVI 190
>gi|320530213|ref|ZP_08031283.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
artemidis F0399]
gi|320137646|gb|EFW29558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
artemidis F0399]
Length = 199
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/178 (60%), Positives = 146/178 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP++D++AN++VAQ+L+L++ DP+KDI +Y+NSPGG VTAG+
Sbjct: 11 RAYDIYSRLLKERIIFLGGPIDDNVANVVVAQMLFLESEDPDKDIHLYINSPGGVVTAGL 70
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G AASMG+ LL+AG KGKRY+LP++RIMIHQPLGGAQG +D
Sbjct: 71 AIYDTMQYIKPDVSTICIGQAASMGSILLTAGAKGKRYALPHARIMIHQPLGGAQGQSTD 130
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
I +QA E+L + N L+ HTGQ +KIN DT+RD FMSAEEAK YGLID VV+ P
Sbjct: 131 IQIQAKEILRLREVGNEILARHTGQDTDKINVDTERDNFMSAEEAKAYGLIDEVVVRP 188
>gi|403252433|ref|ZP_10918743.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. EMP]
gi|402812446|gb|EJX26925.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. EMP]
Length = 201
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 146/179 (81%), Gaps = 3/179 (1%)
Query: 110 GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSV 166
GR++ ++ S+L + RI+ G P++D +AN+++AQLL+L+A DP+KD+ +Y+NSPGGSV
Sbjct: 19 GRYERAYDIFSRLLKDRIVFLGSPIDDHVANLVIAQLLFLEAEDPDKDVYLYINSPGGSV 78
Query: 167 TAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQG 226
TAG+AI+DT+++I+ DVST+CVG AASM A LL+AG KGKRY+LPN+RIMIHQPLGGA+G
Sbjct: 79 TAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEG 138
Query: 227 GQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
D+++ E+L K LN LS HTGQ +EKI +DTDRDFFMSAEEAK+YG++D VV
Sbjct: 139 PAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 197
>gi|398833401|ref|ZP_10591533.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Herbaspirillum sp. YR522]
gi|398221568|gb|EJN07975.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Herbaspirillum sp. YR522]
Length = 208
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 144/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GPV D MAN+IVAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 30 RAYDIYSRLLKERIIFLVGPVNDGMANLIVAQLLFLESENPDKDISLYINSPGGSVSAGM 89
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT++ I+P VST+C GLAASMGAFLL+AG KGKR+SLPNSRIMIHQPLGGAQG SD
Sbjct: 90 AIFDTMQFIKPQVSTLCTGLAASMGAFLLAAGAKGKRFSLPNSRIMIHQPLGGAQGQASD 149
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ + LN L+ TG+++E+I +DTDRD FMSA+ A +YGLID V+
Sbjct: 150 IEIQAREILYLRERLNAILAEKTGRSVEQIAKDTDRDNFMSADAAAEYGLIDKVL 204
>gi|170720927|ref|YP_001748615.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
W619]
gi|325274289|ref|ZP_08140400.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
TJI-51]
gi|226706466|sp|B1J692.1|CLPP_PSEPW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|169758930|gb|ACA72246.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
putida W619]
gi|324100572|gb|EGB98307.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
TJI-51]
Length = 213
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/200 (57%), Positives = 150/200 (75%), Gaps = 6/200 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN++VAQ+L
Sbjct: 6 YIQQSSDIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQML 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+AG K
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAK 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKR+ LPNSR+MIHQPLGG QG +DI++ A E+L+ KA LN L+YHTGQ LE I DT
Sbjct: 126 GKRHCLPNSRVMIHQPLGGFQGQATDIEIHAQEILNIKARLNELLAYHTGQDLETIKRDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGV 284
+RD FMSA A +YGLID V
Sbjct: 186 ERDNFMSASRAAEYGLIDSV 205
>gi|335047467|ref|ZP_08540488.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Parvimonas sp. oral taxon 110 str. F0139]
gi|333761275|gb|EGL38830.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Parvimonas sp. oral taxon 110 str. F0139]
Length = 192
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 144/177 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D MA++IVAQLL+L++ DP KDI +Y+NSPGGSV+AG+
Sbjct: 16 RSYDIYSRLLKERIIFLSGEVNDQMADLIVAQLLFLESEDPKKDIQIYINSPGGSVSAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI++I+PDVST+C+G AASMGAFLL++G KGKR++LPN+ IMIHQPLGGAQG D
Sbjct: 76 AIYDTIQYIKPDVSTICIGRAASMGAFLLTSGAKGKRFALPNADIMIHQPLGGAQGQAED 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I +QA ++L +A LN L+ TGQ+L+KI +DTDRDF+MSA EAK+YG+ID V+ N
Sbjct: 136 IKIQAQKILQVRATLNQILAKRTGQSLKKIEKDTDRDFYMSAYEAKEYGIIDEVIEN 192
>gi|323703643|ref|ZP_08115286.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum nigrificans DSM 574]
gi|333922902|ref|YP_004496482.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323531415|gb|EGB21311.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum nigrificans DSM 574]
gi|333748463|gb|AEF93570.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 195
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP++D +AN+++AQ L+L+A DP KDI +Y+NSPGG VTAG+
Sbjct: 17 RAYDIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDIHLYINSPGGVVTAGL 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+P VST+C+G AASMG+FLL+AG KGKRY+LP +RIMIHQPLGG QG +D
Sbjct: 77 AIYDTMQYIKPAVSTICLGQAASMGSFLLAAGAKGKRYALPQARIMIHQPLGGVQGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
ID+ A E+L + LN LS+HTGQ LEKI DT+RDFFMSAEEAK YG+ID V+
Sbjct: 137 IDIHAREILRMREILNERLSHHTGQPLEKIARDTERDFFMSAEEAKKYGIIDEVM 191
>gi|428774108|ref|YP_007165896.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
gi|428688387|gb|AFZ48247.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
Length = 238
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 141/173 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
+V S+L + RII G ++D +A+ +VAQLLYL+A DP KDI +Y+NSPGGSV +GMAI+
Sbjct: 47 DVYSRLLRERIIFLGTAIDDKLADSVVAQLLYLEAEDPKKDIYIYINSPGGSVYSGMAIY 106
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I PDVST+C G+AASMGAFLL+ G KGKR LPNSRIMIHQPLGGAQG SDI++
Sbjct: 107 DTMQQIEPDVSTICYGIAASMGAFLLAGGAKGKRLGLPNSRIMIHQPLGGAQGQASDIEI 166
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVM 286
QA E+L+ K LN L++HTGQ E+I+EDT+RDF+MS+ EAK+YG+ID +++
Sbjct: 167 QAKEILYIKQRLNEILTHHTGQPFERISEDTERDFYMSSTEAKEYGIIDDIIL 219
>gi|427417857|ref|ZP_18908040.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
gi|425760570|gb|EKV01423.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
Length = 200
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V+D +A+ IVAQLLYLD+ DP KD+ +Y+NSPGGS+TAGM
Sbjct: 14 RAFDIYSRLLRERIVFLGSGVDDTLADSIVAQLLYLDSEDPEKDVQIYINSPGGSITAGM 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ IRPDV T+C GLAASMGAFLLS G KGKR +LP+SRIMIHQPLGGAQG D
Sbjct: 74 AIYDTMQQIRPDVVTICFGLAASMGAFLLSGGAKGKRMALPSSRIMIHQPLGGAQGQAVD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN L+ HTGQ L++I EDT+RDFFMSA EA DYGLID V+
Sbjct: 134 IEIQAREILYLKQRLNELLAGHTGQPLDRIAEDTERDFFMSAAEAADYGLIDTVI 188
>gi|428777917|ref|YP_007169704.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
gi|428692196|gb|AFZ45490.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
Length = 228
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/184 (60%), Positives = 146/184 (79%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G PV+D +A+ + AQ+L+L+A DP KDI +Y+NSPGGSV AGMAI+
Sbjct: 44 DLYSRLLRERIIFLGTPVDDQIADSVAAQMLFLEAEDPEKDIQLYINSPGGSVYAGMAIY 103
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDV+T+C GLAASMGAFLL+ G GKR SL NSRIMIHQPLGGAQG +DI++
Sbjct: 104 DTMQQIQPDVATICYGLAASMGAFLLAGGAAGKRMSLTNSRIMIHQPLGGAQGQAADIEI 163
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQ 293
QA E+L+ K LN L+YHTGQ L++I EDTDRDF+MSA EA++YGLID V+ + + +
Sbjct: 164 QAREILYIKNTLNELLAYHTGQPLDRIAEDTDRDFYMSATEAQEYGLIDQVITSQTRSPR 223
Query: 294 PVAA 297
VAA
Sbjct: 224 EVAA 227
>gi|443315652|ref|ZP_21045132.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 6406]
gi|442784746|gb|ELR94606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 6406]
Length = 201
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D AN+IVAQ+L+L+A DP KDI +Y+NSPGGSVTAG+
Sbjct: 14 RAFDIYSRLLRERIIFLGQEVTSDSANLIVAQMLFLEAEDPEKDIYLYVNSPGGSVTAGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ HIRPDV T+CVGLAASMG+FLL+AG KGKR SLPN+RIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNHIRPDVCTICVGLAASMGSFLLAAGKKGKRMSLPNARIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LNG L+ +TGQ+LEKI DT+RDFF+S +A +YGLID V+
Sbjct: 134 IEIQAKEILYLKGLLNGALAKNTGQSLEKITADTERDFFLSPHQAMEYGLIDQVI 188
>gi|415938744|ref|ZP_11555478.1| ATP-dependent Clp protease, proteolytic subunit [Herbaspirillum
frisingense GSF30]
gi|407759378|gb|EKF69073.1| ATP-dependent Clp protease, proteolytic subunit [Herbaspirillum
frisingense GSF30]
Length = 204
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 145/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GPV D MAN+IVAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 26 RAYDIYSRLLKERIIFLVGPVNDAMANLIVAQLLFLESENPDKDISLYINSPGGSVSAGM 85
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT++ I+P VST+C GLAASMGAFLL+AG KGKR+SLPNSRIMIHQPLGGAQG SD
Sbjct: 86 AIFDTMQFIKPQVSTLCTGLAASMGAFLLAAGAKGKRFSLPNSRIMIHQPLGGAQGQASD 145
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ + LN L+ TG+++E+I++DTDRD FMSA+ A +YGLID V+
Sbjct: 146 IEIQAREILYLRERLNSILADKTGRSVEQISKDTDRDNFMSADAAVEYGLIDKVL 200
>gi|427418142|ref|ZP_18908325.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
gi|425760855|gb|EKV01708.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
Length = 201
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V + +N+IVAQ+L+L+A DP +DI +Y+NSPGGSV G+
Sbjct: 14 RAFDIYSRLLRERIVFLGQQVTAESSNLIVAQMLFLEAEDPERDIYLYINSPGGSVYDGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
IFDT+ HI+PDVST+CVGLAASMGAFLLSAGTKGKR SLPNSRIMIHQPLGGAQG +D
Sbjct: 74 GIFDTMNHIKPDVSTICVGLAASMGAFLLSAGTKGKRMSLPNSRIMIHQPLGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN L+ HTGQ +E+I EDT+RDFFMS EA +YGLID V+
Sbjct: 134 IEIQAKEILYIKKTLNDALAAHTGQPIERITEDTERDFFMSPSEAVEYGLIDQVI 188
>gi|15643458|ref|NP_228504.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
gi|148269380|ref|YP_001243840.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
petrophila RKU-1]
gi|170288038|ref|YP_001738276.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. RQ2]
gi|281411923|ref|YP_003346002.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
naphthophila RKU-10]
gi|418045135|ref|ZP_12683231.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
gi|6685314|sp|Q9WZF9.1|CLPP_THEMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214719|sp|A5IJ91.1|CLPP_THEP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706553|sp|B1L812.1|CLPP_THESQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|4981218|gb|AAD35777.1|AE001741_10 ATP-dependent Clp protease, proteolytic subunit [Thermotoga
maritima MSB8]
gi|147734924|gb|ABQ46264.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga
petrophila RKU-1]
gi|170175541|gb|ACB08593.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
sp. RQ2]
gi|281373026|gb|ADA66588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
naphthophila RKU-10]
gi|351678217|gb|EHA61364.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
Length = 203
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 146/179 (81%), Gaps = 3/179 (1%)
Query: 110 GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSV 166
GR++ ++ S+L + RI+ G P++D +AN+++AQLL+L+A DP+KD+ +Y+NSPGGSV
Sbjct: 21 GRYERAYDIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPGGSV 80
Query: 167 TAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQG 226
TAG+AI+DT+++I+ DVST+CVG AASM A LL+AG KGKRY+LPN+RIMIHQPLGGA+G
Sbjct: 81 TAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEG 140
Query: 227 GQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
D+++ E+L K LN LS HTGQ +EKI +DTDRDFFMSAEEAK+YG++D VV
Sbjct: 141 PAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 199
>gi|334128684|ref|ZP_08502565.1| ATP-dependent Clp protease, protease subunit [Centipeda periodontii
DSM 2778]
gi|333386421|gb|EGK57635.1| ATP-dependent Clp protease, protease subunit [Centipeda periodontii
DSM 2778]
Length = 203
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/178 (61%), Positives = 144/178 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP++D +AN++VAQLL+L++ DP+KDI +Y+NSPGG VTAG+
Sbjct: 17 RAYDIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYINSPGGVVTAGL 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G AASMG+ LL+AG GKRY+LP++RIMIHQPLGGAQG +D
Sbjct: 77 AIYDTMQYIKPDVSTICIGQAASMGSILLTAGAAGKRYALPHARIMIHQPLGGAQGQSTD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
I +QA E+L + N L+ HTGQ EKIN DT+RD FMSAEEAK+YGLID VV P
Sbjct: 137 IQIQAKEILRLREVGNNILARHTGQDPEKINVDTERDNFMSAEEAKEYGLIDEVVTRP 194
>gi|338532521|ref|YP_004665855.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
gi|337258617|gb|AEI64777.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
Length = 203
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/175 (62%), Positives = 144/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G PV DD+ANIIVAQLL+L++ DP+K I +Y+NSPGGSVTAG+
Sbjct: 15 RAYDLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPGGSVTAGL 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++++ VST+CVG AASMGA LL AG KGKRY+LPNSRIMIHQPLGGAQG +D
Sbjct: 75 AIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIHQPLGGAQGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
ID+QA E+L ++ +NG + HTG T+E+I +DT+RD+FMSAE+A+ YGLID VV
Sbjct: 135 IDIQAKEILRLRSYINGLIVKHTGHTIERIEKDTERDYFMSAEDARQYGLIDEVV 189
>gi|28870881|ref|NP_793500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213968834|ref|ZP_03396975.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. tomato T1]
gi|424066809|ref|ZP_17804271.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|424071462|ref|ZP_17808887.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|443644728|ref|ZP_21128578.1| ATP-dependent Clp protease, proteolytic subunit [Pseudomonas
syringae pv. syringae B64]
gi|28854130|gb|AAO57195.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213926437|gb|EEB59991.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. tomato T1]
gi|407998842|gb|EKG39240.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|408001926|gb|EKG42201.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|443284745|gb|ELS43750.1| ATP-dependent Clp protease, proteolytic subunit [Pseudomonas
syringae pv. syringae B64]
Length = 216
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/207 (55%), Positives = 153/207 (73%), Gaps = 6/207 (2%)
Query: 85 EVPSSPYIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANI 138
++ + YI + + GG PM++ R ++ S+L + R+I GPVED MAN+
Sbjct: 3 DMSRNSYIQQNSDIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFMVGPVEDYMANL 62
Query: 139 IVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFL 198
I AQLL+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFL
Sbjct: 63 IAAQLLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFL 122
Query: 199 LSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLE 258
L+ G +GKR+ LPNSR+MIHQPLGG QG SDID+ A E+LH + LN L++HTGQ+LE
Sbjct: 123 LAGGAEGKRHCLPNSRMMIHQPLGGFQGQASDIDIHAKEILHIRHRLNSLLAHHTGQSLE 182
Query: 259 KINEDTDRDFFMSAEEAKDYGLIDGVV 285
I DT+RD FMSAE A +YGLID V+
Sbjct: 183 TIERDTERDNFMSAERAAEYGLIDSVI 209
>gi|313894919|ref|ZP_07828479.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 137 str. F0430]
gi|402301976|ref|ZP_10821097.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC9]
gi|312976600|gb|EFR42055.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 137 str. F0430]
gi|400381261|gb|EJP34064.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC9]
Length = 205
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/178 (60%), Positives = 145/178 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP++D +AN++VAQ+L+L++ DP+KDI +Y+NSPGG VTAG+
Sbjct: 17 RAYDIYSRLLKERIIFLGGPIDDSVANVVVAQMLFLESEDPDKDIHLYINSPGGVVTAGL 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G AASMG+ LL+AG KGKRY+LP++RIMIHQPLGGAQG +D
Sbjct: 77 AIYDTMQYIKPDVSTICIGQAASMGSILLTAGAKGKRYALPHARIMIHQPLGGAQGQSTD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
I +QA E+L + N L+ HTGQ +KIN DT+RD FMSAEEAK YGLID VV+ P
Sbjct: 137 IQIQAKEILRLREVGNEILARHTGQDTDKINVDTERDNFMSAEEAKAYGLIDEVVVRP 194
>gi|445496993|ref|ZP_21463848.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Janthinobacterium sp. HH01]
gi|444786988|gb|ELX08536.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Janthinobacterium sp. HH01]
Length = 208
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 146/177 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPV D MAN+IVAQLL+L++ +P+KDI +Y+NSPGGSV+AG+
Sbjct: 30 RSYDIYSRLLKERVIFMVGPVNDQMANLIVAQLLFLESENPDKDISLYINSPGGSVSAGL 89
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT++ I+PDVST+C G+AASMGAFLL+AG KGKR+SLPNSRIMIHQP GG+QG SD
Sbjct: 90 AIFDTMQFIKPDVSTLCTGMAASMGAFLLAAGAKGKRFSLPNSRIMIHQPSGGSQGMASD 149
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++QA E+L+ + LN ++ TGQ++E+I +DTDRD FMSAEEA +YGLID ++ N
Sbjct: 150 IEIQAKEILYLRHRLNSIMAERTGQSVEQIAKDTDRDRFMSAEEAVEYGLIDKMLSN 206
>gi|284929120|ref|YP_003421642.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
gi|284809579|gb|ADB95284.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
Length = 214
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/172 (64%), Positives = 137/172 (79%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G PV+D MAN IVAQLLYLD+ DP KDI +Y+NSPGGSV AG+AI+
Sbjct: 42 DIYSRLLRERIIFLGTPVDDQMANSIVAQLLYLDSEDPEKDIQLYINSPGGSVYAGLAIY 101
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ IRPD+ T+C GLAASMGAFLLS GTKGKR +LP+SRIMIHQPLGGAQG DI +
Sbjct: 102 DTMKQIRPDIVTICFGLAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGAQGQAVDIAI 161
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+ K LN LS HTG+ + I DT+RDFFMS++EA +YGLID V+
Sbjct: 162 QAQEILYIKKRLNNMLSEHTGKPFDTIAADTERDFFMSSKEAVEYGLIDKVI 213
>gi|66044992|ref|YP_234833.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. syringae B728a]
gi|71733685|ref|YP_273935.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|237803596|ref|ZP_04591181.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|257483815|ref|ZP_05637856.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|289627504|ref|ZP_06460458.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aesculi str. NCPPB 3681]
gi|289649945|ref|ZP_06481288.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aesculi str. 2250]
gi|289679415|ref|ZP_06500305.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. syringae FF5]
gi|301384120|ref|ZP_07232538.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tomato Max13]
gi|302059517|ref|ZP_07251058.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tomato K40]
gi|302135032|ref|ZP_07261022.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|302187983|ref|ZP_07264656.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. syringae 642]
gi|410092110|ref|ZP_11288650.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
viridiflava UASWS0038]
gi|416015383|ref|ZP_11562996.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. glycinea str. B076]
gi|416028212|ref|ZP_11571268.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422406896|ref|ZP_16483913.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422583545|ref|ZP_16658668.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|422591339|ref|ZP_16665984.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|422595334|ref|ZP_16669622.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|422606345|ref|ZP_16678355.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. mori str. 301020]
gi|422617411|ref|ZP_16686114.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. japonica str. M301072]
gi|422630346|ref|ZP_16695544.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. pisi str. 1704B]
gi|422640406|ref|ZP_16703833.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae Cit 7]
gi|422645838|ref|ZP_16708973.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|422650231|ref|ZP_16713037.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|422660628|ref|ZP_16723036.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. lachrymans str. M302278]
gi|422674865|ref|ZP_16734215.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aceris str. M302273]
gi|422683344|ref|ZP_16741605.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|440721402|ref|ZP_20901801.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae BRIP34876]
gi|440724449|ref|ZP_20904731.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae BRIP34881]
gi|440746734|ref|ZP_20926014.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae BRIP39023]
gi|38257468|sp|Q87YR6.2|CLPP_PSESM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|81308384|sp|Q4ZVM7.1|CLPP_PSEU2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|110816461|sp|Q48KZ0.1|CLPP_PSE14 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|63255699|gb|AAY36795.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudomonas
syringae pv. syringae B728a]
gi|71554238|gb|AAZ33449.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|298159270|gb|EFI00328.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|320325361|gb|EFW81428.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. glycinea str. B076]
gi|320327654|gb|EFW83662.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330868375|gb|EGH03084.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330878772|gb|EGH12921.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|330882125|gb|EGH16274.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330889997|gb|EGH22658.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. mori str. 301020]
gi|330897794|gb|EGH29213.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. japonica str. M301072]
gi|330939706|gb|EGH43001.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. pisi str. 1704B]
gi|330952797|gb|EGH53057.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae Cit 7]
gi|330959387|gb|EGH59647.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|330963320|gb|EGH63580.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|330972589|gb|EGH72655.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aceris str. M302273]
gi|330985639|gb|EGH83742.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|331012679|gb|EGH92735.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|331019229|gb|EGH99285.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. lachrymans str. M302278]
gi|331025578|gb|EGI05634.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|409760538|gb|EKN45671.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
viridiflava UASWS0038]
gi|440363823|gb|ELQ00982.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae BRIP34876]
gi|440370093|gb|ELQ07039.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae BRIP34881]
gi|440370994|gb|ELQ07859.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae BRIP39023]
Length = 213
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/201 (56%), Positives = 150/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFMVGPVEDYMANLIAAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+ G +
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAGGAE 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKR+ LPNSR+MIHQPLGG QG SDID+ A E+LH + LN L++HTGQ+LE I DT
Sbjct: 126 GKRHCLPNSRMMIHQPLGGFQGQASDIDIHAKEILHIRHRLNSLLAHHTGQSLETIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE A +YGLID V+
Sbjct: 186 ERDNFMSAERAAEYGLIDSVI 206
>gi|433542295|ref|ZP_20498724.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
gi|432186391|gb|ELK43863.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
Length = 198
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P+ D +ANI+VAQLL+L A DP KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDVST+C+G+AASMGAFLL+AGTKGKRY+LPNS +MIHQPLGGAQG SD
Sbjct: 76 AIYDTMHFIKPDVSTICIGMAASMGAFLLAAGTKGKRYALPNSEVMIHQPLGGAQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +L + +LN L+ TGQ LE+I +DTDRD F+SA+EA +YGLID V+
Sbjct: 136 IEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAQEAVEYGLIDKVI 190
>gi|225850859|ref|YP_002731093.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Persephonella
marina EX-H1]
gi|225644930|gb|ACO03116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Persephonella
marina EX-H1]
Length = 202
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +AN+I+AQLL+L++ DP KDI MY+NSPGG VT+G+
Sbjct: 25 RAYDIYSRLLKDRIIMLGFPIDDHIANLIIAQLLFLESEDPEKDIYMYINSPGGVVTSGL 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+R+I+PDV T+C+G AASMGAFLLSAG KGKRY+LP+SRIMIHQPLGG QG +D
Sbjct: 85 AIYDTMRYIKPDVVTICMGQAASMGAFLLSAGAKGKRYALPSSRIMIHQPLGGFQGQATD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L K LN L+ HTGQ LEKI DT+RDFFMSA +A +YGLID V+
Sbjct: 145 IEIHAKEILRLKKYLNERLAEHTGQPLEKIERDTERDFFMSAHDAVEYGLIDKVI 199
>gi|289207758|ref|YP_003459824.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thioalkalivibrio sp. K90mix]
gi|288943389|gb|ADC71088.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalivibrio sp. K90mix]
Length = 224
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 114/196 (58%), Positives = 151/196 (77%), Gaps = 6/196 (3%)
Query: 96 AQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAV 149
AQ QG PM++ R ++ S+L + R+I C GPVED MAN+IVAQLL+L++
Sbjct: 10 AQHAQGLNLVPMVVEQTARGERAYDIYSRLLKDRVIFCVGPVEDYMANVIVAQLLFLESE 69
Query: 150 DPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS 209
+P+K+I +Y+NSPGG+VTAGMAI+DT++ I+P VST+CVG AASMGA LL+ G GKRYS
Sbjct: 70 NPDKEISLYINSPGGAVTAGMAIYDTMQFIKPQVSTLCVGQAASMGAVLLAGGAPGKRYS 129
Query: 210 LPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFF 269
LP+SR+MIHQPLGG QG SDID+ A E+L + LN L++HTGQT+E++ +DTDRD F
Sbjct: 130 LPHSRVMIHQPLGGFQGQASDIDIHAREILKIREELNRVLAHHTGQTVEQVEQDTDRDRF 189
Query: 270 MSAEEAKDYGLIDGVV 285
M+A EAKDYGL+D V+
Sbjct: 190 MTAVEAKDYGLVDNVL 205
>gi|22298615|ref|NP_681862.1| ATP-dependent Clp protease proteolytic subunit [Thermosynechococcus
elongatus BP-1]
gi|34222549|sp|Q8DJZ9.1|CLPP2_THEEB RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|22294795|dbj|BAC08624.1| ATP-dependent Clp protease proteolytic subunit 2
[Thermosynechococcus elongatus BP-1]
Length = 198
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 142/172 (82%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ ++L++ RII G V+D++AN IVA +LYLD+ DP KDI++Y+NSPGGSVTAGMAI+
Sbjct: 22 DIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPGKDIMLYINSPGGSVTAGMAIY 81
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HI+ DV T+CVGLAASMG+FLL+AGTKGKR +LP+SRIMIHQP GG +G +DI++
Sbjct: 82 DTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRGQATDIEI 141
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
+A E+L + LN +YHTGQ LEKI D DRDFFMSAEEAK+YGLID V+
Sbjct: 142 EAREILRVRRQLNELYAYHTGQPLEKIERDMDRDFFMSAEEAKNYGLIDRVI 193
>gi|395762551|ref|ZP_10443220.1| ATP-dependent Clp protease proteolytic subunit [Janthinobacterium
lividum PAMC 25724]
Length = 205
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 145/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPV D MAN++VAQLL+L++ +P K+I +Y+NSPGGSV+AGM
Sbjct: 27 RSYDIYSRLLKERLIFMVGPVNDQMANLVVAQLLFLESENPEKEISLYINSPGGSVSAGM 86
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C G+AASMGAFLL+AG KGKR+SLPNSRIMIHQP GG+QG SD
Sbjct: 87 AIYDTMQFIKPDVSTLCTGMAASMGAFLLAAGAKGKRFSLPNSRIMIHQPSGGSQGMASD 146
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ + LNG ++ TGQ++E+I +DTDRD FMSA+EA +YGLID V+
Sbjct: 147 IEIQAREILYLRTRLNGIMAERTGQSIEQIAKDTDRDRFMSADEAVEYGLIDKVL 201
>gi|335038541|ref|ZP_08531774.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
gi|334181561|gb|EGL84093.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
Length = 196
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 115/202 (56%), Positives = 146/202 (72%), Gaps = 8/202 (3%)
Query: 90 PYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAV 149
P IPT + G R ++ S+L + RII G P++D +AN +VAQLL+L A
Sbjct: 2 PLIPTVIEQTNRGE-------RAYDIYSRLLKDRIIFLGTPIDDQVANAVVAQLLFLAAE 54
Query: 150 DPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS 209
DP KDI +Y+NSPGGS+TAGMAI+DT+++I+P VST+C+GLAASMGAFLL+AG KGKR++
Sbjct: 55 DPEKDISLYINSPGGSITAGMAIYDTMQYIKPKVSTICIGLAASMGAFLLAAGEKGKRFA 114
Query: 210 LPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFF 269
LPNS +MIHQPLGG QG SDI++ A +L + LN L+ TGQ LE+I DTDRD F
Sbjct: 115 LPNSEVMIHQPLGGTQGQASDIEIHAKRILKMRDRLNKILAERTGQPLERIERDTDRDHF 174
Query: 270 MSAEEAKDYGLIDGVVM-NPHK 290
MSAEEAK YGLID V+ P K
Sbjct: 175 MSAEEAKAYGLIDEVITRTPEK 196
>gi|306820816|ref|ZP_07454440.1| ATP-dependent Clp protease proteolytic subunit [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|402310280|ref|ZP_10829246.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eubacterium sp. AS15]
gi|304551134|gb|EFM39101.1| ATP-dependent Clp protease proteolytic subunit [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|400368732|gb|EJP21739.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eubacterium sp. AS15]
Length = 195
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/180 (60%), Positives = 143/180 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D A++IVAQLL+L++ DP+KDI Y+NSPGGS+TAGM
Sbjct: 16 RSYDIYSRLLKERIIFLGDEVNDQTASLIVAQLLFLESEDPDKDIHFYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++HI+PDVST+CVG+AASMGAFLLS+G KGKRY+LPNS IMIHQPLGG +G +D
Sbjct: 76 AIYDTMQHIKPDVSTICVGMAASMGAFLLSSGKKGKRYALPNSEIMIHQPLGGTKGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I + A ++ + LN ++ TG+++E IN+DT+RDFFMSAEEAKDYGLID V++ K
Sbjct: 136 IQIHAERIIRLRKKLNEIMAEQTGKSIEIINKDTERDFFMSAEEAKDYGLIDSVMLGRGK 195
>gi|399050633|ref|ZP_10740728.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
gi|398051596|gb|EJL43914.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
Length = 200
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P+ D +ANI+VAQLL+L A DP KDI +Y+NSPGGS+TAGM
Sbjct: 18 RAYDIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPGGSITAGM 77
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDVST+C+G+AASMGAFLL+AGTKGKRY+LPNS +MIHQPLGGAQG SD
Sbjct: 78 AIYDTMHFIKPDVSTICIGMAASMGAFLLAAGTKGKRYALPNSEVMIHQPLGGAQGQASD 137
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +L + +LN L+ TGQ LE+I +DTDRD F+SA+EA +YGLID V+
Sbjct: 138 IEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAQEAVEYGLIDKVI 192
>gi|167032910|ref|YP_001668141.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
GB-1]
gi|189082463|sp|B0KJG6.1|CLPP_PSEPG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166859398|gb|ABY97805.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
putida GB-1]
Length = 213
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 114/200 (57%), Positives = 148/200 (74%), Gaps = 6/200 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN++VAQ+L
Sbjct: 6 YIQQSSDIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQML 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+AG K
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLTAGAK 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKR+ LPNSR+MIHQPLGG QG +DI + A E+L KA LN L+YHTGQ LE I DT
Sbjct: 126 GKRHCLPNSRVMIHQPLGGFQGQATDIQIHAQEILSIKARLNELLAYHTGQDLETIQRDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGV 284
+RD FMSA A +YGLID V
Sbjct: 186 ERDNFMSASRAAEYGLIDSV 205
>gi|389843764|ref|YP_006345844.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesotoga
prima MesG1.Ag.4.2]
gi|387858510|gb|AFK06601.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesotoga
prima MesG1.Ag.4.2]
Length = 205
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 157/203 (77%), Gaps = 7/203 (3%)
Query: 89 SPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDA 148
+P++P Y ++G G R ++ ++L RI+ G P++D+++NI+VAQLL+L++
Sbjct: 6 APFVP-YVVEDRGRGE------RIFDIYTKLLSERIVFLGWPIDDEVSNIVVAQLLFLES 58
Query: 149 VDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRY 208
DP KDI +Y+NSPGGS+T+G+AI+DT+++I+PD+ST+C+G+AASMGA LL+ GTKGKR+
Sbjct: 59 QDPEKDINLYINSPGGSITSGLAIYDTMQYIKPDISTICIGMAASMGAILLAGGTKGKRF 118
Query: 209 SLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDF 268
+LPNSR+MIHQP GGA+G DI+++A E+L+ + LN L+ HTGQ+++KI +D DRDF
Sbjct: 119 ALPNSRVMIHQPFGGAEGVAKDIEIRAREILYLRDELNKILAKHTGQSIKKIEKDADRDF 178
Query: 269 FMSAEEAKDYGLIDGVVMNPHKI 291
FMS+ EA +YG+ID V+ K+
Sbjct: 179 FMSSTEAVEYGMIDKVIEQKAKV 201
>gi|124266485|ref|YP_001020489.1| ATP-dependent Clp protease proteolytic subunit ClpP [Methylibium
petroleiphilum PM1]
gi|189082491|sp|A2SFB5.1|CLPP_METPP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|124259260|gb|ABM94254.1| ATP-dependent Clp protease proteolytic subunit ClpP [Methylibium
petroleiphilum PM1]
Length = 202
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 144/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPV D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AG+
Sbjct: 24 RAYDIYSRLLRERVIFLVGPVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGL 83
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+IFDT++ I+PDVST+C+G+AASMGAFLL+AG KGKR++LPNSR+MIHQP GGAQG +D
Sbjct: 84 SIFDTMQFIKPDVSTLCMGIAASMGAFLLAAGAKGKRFALPNSRVMIHQPSGGAQGQATD 143
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L + +LNG L+ TGQ LEKI D++RD+FMSAEEA YGLID V+
Sbjct: 144 IEIQAREILKLRESLNGILAERTGQPLEKIRADSERDYFMSAEEATGYGLIDKVI 198
>gi|163781838|ref|ZP_02176838.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenivirga sp.
128-5-R1-1]
gi|159883058|gb|EDP76562.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenivirga sp.
128-5-R1-1]
Length = 201
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L Q RI+ G P++D +AN+IVAQLL+L++ DP+KDI +Y+NSPGGSVTAGM
Sbjct: 23 RAYDIYSRLLQDRIVLLGFPIDDHVANLIVAQLLFLESQDPDKDIYLYINSPGGSVTAGM 82
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
A++DT+++I+PDV T+C+G AASMGA LL+AG KGKRY+LP+SRIMIHQPLGG QG +D
Sbjct: 83 AVYDTMQYIKPDVVTICIGQAASMGAVLLAAGAKGKRYALPHSRIMIHQPLGGIQGQATD 142
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+ K LN L+ HTGQ LEKI +D +RD+FMSAEEAKDYG+ID V+
Sbjct: 143 IIIHAEEIKRIKRMLNEILAKHTGQDLEKIEKDVERDYFMSAEEAKDYGVIDKVI 197
>gi|118474160|ref|YP_892812.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter fetus
subsp. fetus 82-40]
gi|424821464|ref|ZP_18246502.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter fetus
subsp. venerealis NCTC 10354]
gi|118413386|gb|ABK81806.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
fetus subsp. fetus 82-40]
gi|342328243|gb|EGU24727.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter fetus
subsp. venerealis NCTC 10354]
Length = 196
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 115/202 (56%), Positives = 147/202 (72%), Gaps = 7/202 (3%)
Query: 89 SPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDA 148
S YIP + G R ++ S+L + RII G +ED MA+ IVAQ+L+L+A
Sbjct: 2 SYYIPYVVERTSKGE-------RSYDIYSRLLKDRIIMLSGEIEDAMASAIVAQMLFLEA 54
Query: 149 VDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRY 208
DP+KDI +Y+NSPGG VT+G +I+DT+ +I+PDV T+C+G AASMGAFLLS GTKGKRY
Sbjct: 55 EDPDKDIYLYINSPGGVVTSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGTKGKRY 114
Query: 209 SLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDF 268
+LPNSRIMIHQPLGGA+G +DI++QA E+L K LN L+ +TGQ L KI +DTDRDF
Sbjct: 115 ALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKEVLNSTLAKNTGQKLAKIAKDTDRDF 174
Query: 269 FMSAEEAKDYGLIDGVVMNPHK 290
FMSA EA +YGLID V+ K
Sbjct: 175 FMSAHEAAEYGLIDNVLEKSFK 196
>gi|388547449|ref|ZP_10150714.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
M47T1]
gi|388274536|gb|EIK94133.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
M47T1]
Length = 213
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 113/201 (56%), Positives = 150/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN++ AQLL
Sbjct: 6 YIQQSSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLIGPVEDYMANLVCAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST C+G A SMGAFLL+ G K
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTTCIGQACSMGAFLLAGGAK 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKRY LPNSR+MIHQPLGG QG SDID+ A E+L + LN L++HTGQTLE+I +DT
Sbjct: 126 GKRYCLPNSRVMIHQPLGGFQGQASDIDIHAREILSIRHRLNELLAFHTGQTLEQIEQDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSA+ A +YGL+D V+
Sbjct: 186 NRDNFMSADRAAEYGLVDSVI 206
>gi|160947717|ref|ZP_02094884.1| hypothetical protein PEPMIC_01652 [Parvimonas micra ATCC 33270]
gi|158446851|gb|EDP23846.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Parvimonas micra ATCC 33270]
Length = 192
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 144/177 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D MA++IVAQLL+L++ DP KDI +Y+NSPGGSV+AG+
Sbjct: 16 RSYDIYSRLLKERIIFLSGEVNDQMADLIVAQLLFLESEDPKKDIQIYINSPGGSVSAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G AASMGAFLL++G KGKR++LPN+ IMIHQPLGGAQG D
Sbjct: 76 AIYDTMQYIKPDVSTICIGRAASMGAFLLTSGAKGKRFALPNADIMIHQPLGGAQGQAED 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I +QA ++L +A LN L+ TGQ+L+KI +DTDRDF+MSA EAK+YG+ID V+ N
Sbjct: 136 IKIQAQKILQVRATLNEILAKRTGQSLKKIEKDTDRDFYMSAYEAKEYGIIDEVIEN 192
>gi|414153433|ref|ZP_11409759.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411455112|emb|CCO07662.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 195
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 143/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP++D +A++++AQ L+L+A DP KDI +Y+NSPGG VTAG+
Sbjct: 17 RAYDIYSRLLKDRIIFIGGPIDDHVADLVIAQFLFLEAEDPEKDIHLYINSPGGVVTAGL 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+P VST+C+G A+SMG+FLL+AGTKGKRY+LP +RIMIHQPLGG QG +D
Sbjct: 77 AIYDTMQYIKPPVSTICLGQASSMGSFLLAAGTKGKRYALPMARIMIHQPLGGVQGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
ID+ A E+L K LN L+YHTGQ LEK+ DT+RDFFMSAEEAK YG+ID V+
Sbjct: 137 IDIHAKEILRMKDLLNEKLAYHTGQPLEKVARDTERDFFMSAEEAKQYGIIDEVM 191
>gi|74317695|ref|YP_315435.1| ATP-dependent Clp protease proteolytic subunit [Thiobacillus
denitrificans ATCC 25259]
gi|90183186|sp|Q3SI98.1|CLPP_THIDA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|74057190|gb|AAZ97630.1| peptidase S14, ClpP [Thiobacillus denitrificans ATCC 25259]
Length = 212
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 150/192 (78%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
QG G PM++ R ++ S+L + R+I GPV D AN+IVAQ+L+L++ +P+K
Sbjct: 13 QGLGLVPMVVEQSGRGERAYDIYSRLLKERVIFLVGPVNDATANLIVAQMLFLESENPDK 72
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI +Y+NSPGGSV+AG+AI+DT++ I+PDVST+C+G AASMGAFLL+AG KGKRY LPNS
Sbjct: 73 DIYLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCIGQAASMGAFLLTAGAKGKRYCLPNS 132
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
R+MIHQPLGG QG SDI++ A E+L+ KA LNG L+ HTGQ+LE I+ DTDRD FMSAE
Sbjct: 133 RVMIHQPLGGFQGQASDIEIHAKEILYLKARLNGMLAKHTGQSLEVIDRDTDRDNFMSAE 192
Query: 274 EAKDYGLIDGVV 285
++ YGL+D V+
Sbjct: 193 DSVKYGLVDKVL 204
>gi|332141945|ref|YP_004427683.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'Deep ecotype']
gi|410862350|ref|YP_006977584.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii AltDE1]
gi|327551967|gb|AEA98685.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'Deep ecotype']
gi|410819612|gb|AFV86229.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii AltDE1]
Length = 209
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 112/177 (63%), Positives = 138/177 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + +I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKENVIFLVGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+R I+PDVSTVC+G AASMGAFLLSAG KGKRY LPNSR+MIHQPLGG QG SD
Sbjct: 85 AIYDTMRFIKPDVSTVCMGQAASMGAFLLSAGAKGKRYCLPNSRVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
++ A E+L K LN L+ HTGQ EK+ DTDRD F+SA EAK+YGL+D V+ N
Sbjct: 145 FEIHAKEILSIKEKLNRLLADHTGQDYEKVARDTDRDNFLSATEAKEYGLVDQVLAN 201
>gi|67923459|ref|ZP_00516936.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|67854694|gb|EAM49976.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
Length = 262
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G PV+D +A+ IVAQLL+LDA DP KDI +Y+NSPGGSV AG+
Sbjct: 72 RAFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGL 131
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ IRPDV T+C GLAASMGAFLLS GTKGKR +LP+SRIMIHQPLGGAQG +
Sbjct: 132 AIYDTMQQIRPDVVTICFGLAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGAQGQAVE 191
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN L+ HTGQ + I DT+RDFFMSA+EA DYGLID V+
Sbjct: 192 IEIQAKEILYIKKRLNDMLAEHTGQPFDTIAADTERDFFMSAQEAVDYGLIDKVI 246
>gi|429737530|ref|ZP_19271388.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 138 str. F0429]
gi|429152336|gb|EKX95166.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 138 str. F0429]
Length = 197
Score = 233 bits (595), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 109/178 (61%), Positives = 143/178 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP++D +AN++VAQLL+L++ DP+KDI +Y+NSPGG VTAG+
Sbjct: 11 RAYDIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYINSPGGVVTAGL 70
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G AASMG+ LL+AG GKRY+LP++RIMIHQPLGGAQG +D
Sbjct: 71 AIYDTMQYIKPDVSTICIGQAASMGSILLTAGAAGKRYALPHARIMIHQPLGGAQGQSTD 130
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
I +QA E+L + N L+ HTGQ EKIN DT+RD FMSAEEAK YGLID VV P
Sbjct: 131 IQIQAKEILRLREVGNNILARHTGQDPEKINVDTERDNFMSAEEAKAYGLIDEVVTRP 188
>gi|416405032|ref|ZP_11687843.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
gi|357261367|gb|EHJ10638.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
Length = 262
Score = 233 bits (595), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G PV+D +A+ IVAQLL+LDA DP KDI +Y+NSPGGSV AG+
Sbjct: 72 RAFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGL 131
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ IRPDV T+C GLAASMGAFLLS GTKGKR +LP+SRIMIHQPLGGAQG +
Sbjct: 132 AIYDTMQQIRPDVVTICFGLAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGAQGQAVE 191
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN L+ HTGQ + I DT+RDFFMSA+EA DYGLID V+
Sbjct: 192 IEIQAKEILYIKKRLNDMLAEHTGQPFDTIAADTERDFFMSAQEAVDYGLIDKVI 246
>gi|354586092|ref|ZP_09004765.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
lactis 154]
gi|353183068|gb|EHB48600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
lactis 154]
Length = 198
Score = 233 bits (594), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D +AN I+AQ+L+L A DP KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDIHLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT++ I+PDVST+CVG+AASMGAFLL+AG KGKRY+LPNS IMIHQPLGGAQG +D
Sbjct: 76 AIFDTMQFIKPDVSTICVGMAASMGAFLLNAGAKGKRYALPNSEIMIHQPLGGAQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I+++A +L + LN L+ TGQ LE+I +DTDRD+FM+AEEAK+YGL+D V+
Sbjct: 136 IEIRARRILKMRDKLNRILAERTGQPLERIEKDTDRDYFMTAEEAKEYGLVDQVL 190
>gi|334143754|ref|YP_004536910.1| ATP-dependent Clp protease proteolytic subunit [Thioalkalimicrobium
cyclicum ALM1]
gi|333964665|gb|AEG31431.1| ATP-dependent Clp protease proteolytic subunit [Thioalkalimicrobium
cyclicum ALM1]
Length = 201
Score = 233 bits (594), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 143/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPVED MAN+IVAQ+L+L++ +P KDI +Y+NSPGGSVTAGM
Sbjct: 23 RAFDIYSRLLKERVIFLVGPVEDHMANLIVAQMLFLESENPEKDIHLYINSPGGSVTAGM 82
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+R I+PDVST+C+G AASMG+FLL+AG KGKR++LPNSR+MIHQPLGG QG SD
Sbjct: 83 AIYDTMRFIKPDVSTMCLGQAASMGSFLLAAGAKGKRFALPNSRVMIHQPLGGFQGQASD 142
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
++ A E+L+ K LN LS +TGQ +E I +DTDRD FMSAE+AKDYGLID V+
Sbjct: 143 FEIHAREILYIKDKLNKALSENTGQPIEVIEQDTDRDNFMSAEKAKDYGLIDQVL 197
>gi|357059570|ref|ZP_09120412.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas infelix
ATCC 43532]
gi|355371647|gb|EHG18991.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas infelix
ATCC 43532]
Length = 203
Score = 233 bits (594), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 108/178 (60%), Positives = 144/178 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP++D +AN++VAQLL+L++ DP+KDI +Y+NSPGG VTAG+
Sbjct: 17 RAYDIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYINSPGGVVTAGL 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G AASMG+ LL+AG GKRY+LP++RIMIHQPLGGAQG +D
Sbjct: 77 AIYDTMQYIKPDVSTICIGQAASMGSILLTAGAAGKRYALPHARIMIHQPLGGAQGQSTD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
I +QA E+L + N L++HTGQ EKIN DT+RD FMSAEEA+ YGLID VV P
Sbjct: 137 IQIQAKEILRLREVGNNILAHHTGQDPEKINVDTERDNFMSAEEARAYGLIDEVVTRP 194
>gi|374705740|ref|ZP_09712610.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp. S9]
Length = 213
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 150/205 (73%), Gaps = 6/205 (2%)
Query: 89 SPYIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQ 142
+P++ + GG PM++ R ++ S+L + R+I GPVED MAN++ AQ
Sbjct: 4 NPFMQQMPDMQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLIGPVEDYMANLVAAQ 63
Query: 143 LLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAG 202
LL+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST C+G A SMGAFLL+ G
Sbjct: 64 LLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTTCIGQACSMGAFLLAGG 123
Query: 203 TKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINE 262
GKR+ LPNSR+MIHQPLGG QG SDID+ A E+LH + LN L++HTGQTLE I
Sbjct: 124 APGKRHCLPNSRMMIHQPLGGFQGQASDIDIHAKEILHIRHRLNTLLAHHTGQTLETIER 183
Query: 263 DTDRDFFMSAEEAKDYGLIDGVVMN 287
DT+RD FMSAE A +YGLID V+M
Sbjct: 184 DTERDNFMSAERAAEYGLIDSVMMK 208
>gi|389681563|ref|ZP_10172908.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
chlororaphis O6]
gi|399007987|ref|ZP_10710481.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM17]
gi|425900381|ref|ZP_18876972.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|388555099|gb|EIM18347.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
chlororaphis O6]
gi|397889629|gb|EJL06111.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|398119027|gb|EJM08743.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM17]
Length = 213
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 111/193 (57%), Positives = 147/193 (76%), Gaps = 6/193 (3%)
Query: 99 EQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPN 152
+ GG PM++ R ++ S+L + R+I GPVED MAN++ AQLL+L+A +P+
Sbjct: 14 QAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLIGPVEDYMANLVAAQLLFLEAENPD 73
Query: 153 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 212
KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+ G GKR+ LPN
Sbjct: 74 KDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAGGAAGKRHCLPN 133
Query: 213 SRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSA 272
SR+MIHQPLGG QG SDID+ A E+LH ++ LN L++HTGQ+LE I DT+RD FMSA
Sbjct: 134 SRMMIHQPLGGFQGQASDIDIHAKEILHIRSRLNSLLAHHTGQSLETIERDTERDNFMSA 193
Query: 273 EEAKDYGLIDGVV 285
E A +YGLID V+
Sbjct: 194 ERAAEYGLIDSVI 206
>gi|152989915|ref|YP_001355637.1| ATP-dependent Clp protease proteolytic subunit [Nitratiruptor sp.
SB155-2]
gi|166201830|sp|A6Q1C1.1|CLPP_NITSB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|151421776|dbj|BAF69280.1| ATP-dependent Clp protease, proteolytic subunit [Nitratiruptor sp.
SB155-2]
Length = 196
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 153/197 (77%), Gaps = 7/197 (3%)
Query: 89 SPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDA 148
S YIP Y G G R ++ S+L + RII G + D +A+ IVAQLL+L+A
Sbjct: 2 SYYIP-YVIERTGRGE------RSYDIYSRLLKDRIIMLSGEINDAVASSIVAQLLFLEA 54
Query: 149 VDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRY 208
DP+KDI +Y+NSPGG +T+GM+I+DT+ +I+PDVST+C+G AASMGAFLLS+GTKGKRY
Sbjct: 55 EDPDKDIYLYINSPGGVITSGMSIYDTMNYIKPDVSTICIGQAASMGAFLLSSGTKGKRY 114
Query: 209 SLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDF 268
+LP++RIMIHQPLGGAQG +DI++QA E+L K LN L+ +TGQ+++KI +DT+RDF
Sbjct: 115 ALPHARIMIHQPLGGAQGQATDIEIQAKEILRLKKILNEILAENTGQSVKKIAKDTERDF 174
Query: 269 FMSAEEAKDYGLIDGVV 285
FMS+EEAK+YGLID V+
Sbjct: 175 FMSSEEAKEYGLIDQVL 191
>gi|78043074|ref|YP_359188.1| ATP-dependent Clp protease proteolytic subunit [Carboxydothermus
hydrogenoformans Z-2901]
gi|90101405|sp|Q3AF96.1|CLPP_CARHZ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77995189|gb|ABB14088.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Carboxydothermus hydrogenoformans Z-2901]
Length = 195
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R I GGP++D +AN+++AQ+L+L+A DP KDI +Y+NSPGG +TAGM
Sbjct: 17 RSYDIWSRLLKDRTIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHLYINSPGGVITAGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G AASMGAFLL+AG KGKR+SLP +RIMIHQPLGG QG +D
Sbjct: 77 AIYDTMQYIKPDVSTICIGQAASMGAFLLAAGAKGKRFSLPYARIMIHQPLGGVQGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
ID+ A E+L + LN L+ HTGQ EKI DT+RDFFMSA EAK+YG+ID V+
Sbjct: 137 IDIHAREILRMRDMLNELLTKHTGQPKEKIERDTERDFFMSAAEAKEYGIIDEVI 191
>gi|113475006|ref|YP_721067.1| ATP-dependent Clp protease proteolytic subunit [Trichodesmium
erythraeum IMS101]
gi|110166054|gb|ABG50594.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
Length = 196
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 114/200 (57%), Positives = 153/200 (76%), Gaps = 11/200 (5%)
Query: 86 VPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLY 145
+PS PY +Q E R+ ++ ++L Q RII G V D +AN IVA +LY
Sbjct: 5 IPSVPYRLPGSQYE-----------RWIDIYTRLGQERIIFLGQEVTDGLANRIVAYMLY 53
Query: 146 LDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKG 205
LD+ DPNK I +Y+NSPGGSVTAG+AI+DT+++I+ DV T+C+GLAASMG+FLL+AGTKG
Sbjct: 54 LDSDDPNKPIYLYINSPGGSVTAGLAIYDTMQYIKADVITICLGLAASMGSFLLAAGTKG 113
Query: 206 KRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTD 265
KR +LPNSRIMIHQP+GG +G +DI+++ANE+L ++ LN L+ TGQ+LEKI +DTD
Sbjct: 114 KRLALPNSRIMIHQPMGGTRGQATDIEIEANEILRVRSELNNMLAERTGQSLEKIEKDTD 173
Query: 266 RDFFMSAEEAKDYGLIDGVV 285
RD++MSAEEAK+YGLID V+
Sbjct: 174 RDYYMSAEEAKEYGLIDQVI 193
>gi|401565794|ref|ZP_10806612.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC6]
gi|400185000|gb|EJO19235.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC6]
Length = 203
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 109/178 (61%), Positives = 143/178 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP++D +AN++VAQLL+L++ DP+KDI +Y+NSPGG VTAG+
Sbjct: 17 RAYDIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYINSPGGVVTAGL 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G AASMG+ LL+AG GKRY+LP++RIMIHQPLGGAQG +D
Sbjct: 77 AIYDTMQYIKPDVSTICIGQAASMGSILLTAGAAGKRYALPHARIMIHQPLGGAQGQSTD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
I +QA E+L + N L+ HTGQ EKIN DT+RD FMSAEEAK YGLID VV P
Sbjct: 137 IQIQAKEILRLREVGNNILARHTGQDPEKINVDTERDNFMSAEEAKAYGLIDEVVTRP 194
>gi|425465976|ref|ZP_18845279.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9809]
gi|389831694|emb|CCI25350.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9809]
Length = 233
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 140/179 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G PV+D +A+ IVAQLLYL+A DP KDI +Y+NSPGGSV AG+
Sbjct: 44 RAFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQLYINSPGGSVYAGL 103
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ IRPDV+T+C GLAASMGAFLL G GKR SLP+SRIMIHQPLGGAQG SD
Sbjct: 104 AIYDTMQQIRPDVATICFGLAASMGAFLLCGGAAGKRMSLPSSRIMIHQPLGGAQGQASD 163
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPH 289
I +QA E+L+ K LN L++HTGQ ++I DT+RDFFMSA EAK+YGLID V+ P
Sbjct: 164 IAIQAKEILYIKQRLNTMLAHHTGQPYDRIANDTERDFFMSAVEAKEYGLIDQVISRPE 222
>gi|255589435|ref|XP_002534960.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223524291|gb|EEF27423.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 435
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 148/192 (77%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
QG G PM++ R ++ S+L + R+I GPV D AN++VAQLL+L+A +P+K
Sbjct: 238 QGLGYIPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDMTANLVVAQLLFLEAENPDK 297
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNS
Sbjct: 298 DISLYINSPGGSVTAGMSIYDTMQFIKPDVSTLCIGQAASMGAFLLTAGAKGKRFCLPNS 357
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
R+MIHQPLGG QG SDI++ A E+L+ K LNG +++HTGQ ++ I DTDRD FMSA+
Sbjct: 358 RVMIHQPLGGFQGQASDIEIHAKEILYLKDKLNGIMAHHTGQNIDTIANDTDRDNFMSAD 417
Query: 274 EAKDYGLIDGVV 285
AK YGL+D V+
Sbjct: 418 AAKAYGLVDQVI 429
>gi|292670226|ref|ZP_06603652.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
ATCC 43541]
gi|292648178|gb|EFF66150.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
ATCC 43541]
Length = 197
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 108/178 (60%), Positives = 144/178 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP++D +AN++VAQ+L+L++ DP+KDI +Y+NSPGG VTAG+
Sbjct: 11 RAYDIYSRLLKERIIFLGGPIDDSVANVVVAQMLFLESEDPDKDIHLYINSPGGVVTAGL 70
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G AASMG+ LL+AG KGKRY+LP++RIMIHQPLGGAQG +D
Sbjct: 71 AIYDTMQYIKPDVSTICIGQAASMGSILLTAGAKGKRYALPHARIMIHQPLGGAQGQSTD 130
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
I +QA E+L + N L+ HTGQ +KIN DT+RD FMSAEEAK YGLID VV P
Sbjct: 131 IQIQAKEILRLREVGNHILARHTGQDEKKINVDTERDNFMSAEEAKAYGLIDEVVTRP 188
>gi|134094958|ref|YP_001100033.1| ATP-dependent Clp protease proteolytic subunit [Herminiimonas
arsenicoxydans]
gi|133738861|emb|CAL61908.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Herminiimonas arsenicoxydans]
Length = 209
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 110/175 (62%), Positives = 144/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPV D AN+IVAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 31 RAYDIYSRLLKERVIFLVGPVNDHAANLIVAQLLFLESENPDKDISLYINSPGGSVSAGM 90
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT++ I+P+VST+C GLAASMGAFLL+AG KGKR+SLPNSRIMIHQPLGGAQG SD
Sbjct: 91 AIFDTMQFIKPNVSTLCTGLAASMGAFLLAAGEKGKRFSLPNSRIMIHQPLGGAQGQASD 150
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ + LN L+ TG+TLE+I+ DTDRD FMSA+ A +YG+ID V+
Sbjct: 151 IEIQAREILYLRERLNQILADRTGKTLEEISRDTDRDNFMSADAAVEYGMIDKVL 205
>gi|261404070|ref|YP_003240311.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Y412MC10]
gi|329927993|ref|ZP_08281997.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
gi|261280533|gb|ACX62504.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Y412MC10]
gi|328938097|gb|EGG34494.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
Length = 198
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 111/177 (62%), Positives = 141/177 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D +AN I+AQ+L+L A DP KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDIHLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT++ I+PDVST+CVG+AASMGAFLL+AG KGKRY LPNS IMIHQPLGGAQG +D
Sbjct: 76 AIFDTMQFIKPDVSTICVGMAASMGAFLLNAGAKGKRYGLPNSEIMIHQPLGGAQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I+++A +L + LN LS TGQ LE+I +DTDRD+FM+A+EAK+YGLID V+ N
Sbjct: 136 IEIRARRILKMRDKLNRILSERTGQPLERIEKDTDRDYFMTADEAKEYGLIDQVLEN 192
>gi|423096202|ref|ZP_17083998.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens Q2-87]
gi|397886616|gb|EJL03099.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens Q2-87]
Length = 213
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 111/193 (57%), Positives = 147/193 (76%), Gaps = 6/193 (3%)
Query: 99 EQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPN 152
+ GG PM++ R ++ S+L + R+I GPVED MAN++ AQLL+L+A +P+
Sbjct: 14 QAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLIGPVEDYMANLVAAQLLFLEAENPD 73
Query: 153 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 212
KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+ G GKR+ LPN
Sbjct: 74 KDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAGGAAGKRHCLPN 133
Query: 213 SRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSA 272
SR+MIHQPLGG QG SDID+ A E+LH ++ LN L++HTGQ+LE I DT+RD FMSA
Sbjct: 134 SRMMIHQPLGGFQGQASDIDIHAKEILHIRSRLNSLLAHHTGQSLETIERDTERDNFMSA 193
Query: 273 EEAKDYGLIDGVV 285
E A +YGLID V+
Sbjct: 194 ERAAEYGLIDSVI 206
>gi|152980689|ref|YP_001353221.1| ATP-dependent Clp protease proteolytic subunit [Janthinobacterium
sp. Marseille]
gi|226706516|sp|A6SY74.1|CLPP_JANMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|151280766|gb|ABR89176.1| protease subunit of ATP-dependent Clp proteases [Janthinobacterium
sp. Marseille]
Length = 210
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 144/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GPV D MAN+IVAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 32 RAYDIYSRLLKERIIFLVGPVNDQMANLIVAQLLFLESENPDKDISLYINSPGGSVSAGM 91
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+P+VST+C GLAASMGAFLL+AG KGKR+SLPNSRIMIHQPLGGAQG SD
Sbjct: 92 AIYDTMQFIKPNVSTLCTGLAASMGAFLLAAGEKGKRFSLPNSRIMIHQPLGGAQGQASD 151
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ + LN L+ TG+++E+I +DTDRD FMSA+ A YG+ID V+
Sbjct: 152 IEIQAREILYLRERLNAILAERTGKSVEEIAKDTDRDNFMSADAAVTYGMIDKVL 206
>gi|425737678|ref|ZP_18855949.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
massiliensis S46]
gi|425481335|gb|EKU48495.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
massiliensis S46]
Length = 195
Score = 233 bits (593), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 108/180 (60%), Positives = 143/180 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V+D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSQVDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKRY+LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRYALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ AN +L +A LN LS TGQ ++KI +DTDRD F++AEEAK+YGLID V+ HK
Sbjct: 136 IEIAANHILKTRAKLNKILSERTGQPIDKIEKDTDRDNFLTAEEAKEYGLIDEVMAPEHK 195
>gi|350572241|ref|ZP_08940546.1| ATP-dependent Clp protease, protease subunit [Neisseria wadsworthii
9715]
gi|349790497|gb|EGZ44406.1| ATP-dependent Clp protease, protease subunit [Neisseria wadsworthii
9715]
Length = 212
Score = 233 bits (593), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 156/214 (72%), Gaps = 9/214 (4%)
Query: 85 EVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
E+ ++ IPT + + G G R ++ S+L + RI+ GPV D AN++VAQ+L
Sbjct: 4 EITANTLIPTVIE-QSGRGE------RAFDIYSRLLKERIVFLVGPVNDHTANLVVAQML 56
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L++ +P+KDI Y+NSPGGSVTAGM+IFDT+ ++PDVST+C+G AASMGAFLLSAGTK
Sbjct: 57 FLESENPDKDIYFYINSPGGSVTAGMSIFDTMNFVKPDVSTLCLGQAASMGAFLLSAGTK 116
Query: 205 GKRYSLPNSRIMIHQPL--GGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINE 262
GKR++LPNSRIMIHQPL GG G SDI++ A E++ K LN +L+ HTGQ LEK+
Sbjct: 117 GKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELIKIKEKLNYFLAKHTGQPLEKVER 176
Query: 263 DTDRDFFMSAEEAKDYGLIDGVVMNPHKILQPVA 296
DTDRD FMSAE AK+YGLID V+ N ++ +A
Sbjct: 177 DTDRDNFMSAEAAKEYGLIDQVIENREDAVKAIA 210
>gi|237753395|ref|ZP_04583875.1| ATP-dependent clp protease proteolytic subunit [Helicobacter
winghamensis ATCC BAA-430]
gi|229375662|gb|EEO25753.1| ATP-dependent clp protease proteolytic subunit [Helicobacter
winghamensis ATCC BAA-430]
Length = 196
Score = 233 bits (593), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 112/200 (56%), Positives = 154/200 (77%), Gaps = 7/200 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
Y+PT + + G G R ++ S+L + RII G ++D +A+ IVAQLL+L+A D
Sbjct: 4 YVPTVIE-KTGRGE------RAYDIYSRLLKDRIILLSGQIDDGLASSIVAQLLFLEAED 56
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P KDI +Y+NSPGG VT+G++I+DT+ +++PD+ST+C+G AASMGAFLLS GTKGKRYSL
Sbjct: 57 PEKDIYLYINSPGGVVTSGLSIYDTMNYVKPDISTICIGQAASMGAFLLSCGTKGKRYSL 116
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
PNSRIMIHQPLGGAQG ++I++QA E+L K++LN L+ +T Q LEKI +DTDRDF++
Sbjct: 117 PNSRIMIHQPLGGAQGQATEIEIQAKEILRLKSSLNEILASNTNQPLEKIAKDTDRDFYL 176
Query: 271 SAEEAKDYGLIDGVVMNPHK 290
SA+EA++YGLID V+ K
Sbjct: 177 SAKEAQEYGLIDSVLEKSLK 196
>gi|343520826|ref|ZP_08757795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Parvimonas
sp. oral taxon 393 str. F0440]
gi|343397784|gb|EGV10318.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Parvimonas
sp. oral taxon 393 str. F0440]
Length = 192
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 144/177 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D MA++IVAQLL+L++ DP KDI +Y+NSPGGSV+AG+
Sbjct: 16 RSYDIYSRLLKERIIFLSGEVNDQMADLIVAQLLFLESEDPKKDIQIYINSPGGSVSAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G AASMGAFLL++G KGKR++LPN+ IMIHQPLGGAQG D
Sbjct: 76 AIYDTMQYIKPDVSTICIGRAASMGAFLLTSGAKGKRFALPNADIMIHQPLGGAQGQAED 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I +QA ++L +A LN L+ TGQ+L+KI +DTDRDF+M+A EAK+YG+ID V+ N
Sbjct: 136 IRIQAQKILQVRATLNEILAKRTGQSLKKIEKDTDRDFYMTAHEAKEYGIIDEVIEN 192
>gi|407939906|ref|YP_006855547.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
sp. KKS102]
gi|407897700|gb|AFU46909.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
sp. KKS102]
Length = 202
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 149/192 (77%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
QG G PM++ GR + ++ S+L + R+I GPV D AN++VAQLL+L++ +P+K
Sbjct: 7 QGLGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDQTANLVVAQLLFLESENPDK 66
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI Y+NSPGGSV+AGMAIFDT+ I+PDVST+C G+AASMGAFLL+AG KGKR++LPNS
Sbjct: 67 DISFYINSPGGSVSAGMAIFDTMNFIKPDVSTLCTGMAASMGAFLLAAGAKGKRFALPNS 126
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
++MIHQPLGG QG ++I++ A E+L + LN L+ TGQ LEKI DT+RD+F+SA+
Sbjct: 127 KVMIHQPLGGMQGQATEIEIHAREILKTREQLNKILAERTGQPLEKIQRDTERDYFLSAD 186
Query: 274 EAKDYGLIDGVV 285
EAKDYGL+D V+
Sbjct: 187 EAKDYGLVDQVI 198
>gi|160898086|ref|YP_001563668.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Delftia
acidovorans SPH-1]
gi|333915639|ref|YP_004489371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Delftia sp.
Cs1-4]
gi|160363670|gb|ABX35283.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Delftia
acidovorans SPH-1]
gi|333745839|gb|AEF91016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Delftia sp.
Cs1-4]
Length = 202
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 150/192 (78%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
QG G PM++ GR + ++ S+L + R+I GPV D AN++VAQLL+L++ +P+K
Sbjct: 7 QGLGMIPMVIEQSGRGERSYDIYSRLLKDRVIFLVGPVNDQTANLVVAQLLFLESENPDK 66
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI Y+NSPGGSV+AG+AIFDT+ I+PDVST+C G+AASMGAFLL+AGTKGKR++LPNS
Sbjct: 67 DISFYINSPGGSVSAGLAIFDTMNFIKPDVSTLCTGIAASMGAFLLAAGTKGKRFALPNS 126
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
++MIHQPLGG QG ++I++ A E+L + LN L+ TGQ LEKI DT+RD+F+SAE
Sbjct: 127 QVMIHQPLGGMQGQATEIEIHAREILKTRERLNKILAERTGQPLEKIQHDTERDYFLSAE 186
Query: 274 EAKDYGLIDGVV 285
EAKDYGL+D V+
Sbjct: 187 EAKDYGLVDQVI 198
>gi|329908483|ref|ZP_08274873.1| ATP-dependent Clp protease proteolytic subunit [Oxalobacteraceae
bacterium IMCC9480]
gi|327546710|gb|EGF31661.1| ATP-dependent Clp protease proteolytic subunit [Oxalobacteraceae
bacterium IMCC9480]
Length = 206
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 145/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPV D +AN+IVAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 28 RSYDIYSRLLKERVIFLVGPVNDGVANLIVAQLLFLESENPDKDISLYINSPGGSVSAGM 87
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT++ I+P+VST+C GLAASMGAFLL+AG KGKR+SLPNSRIMIHQP GGAQG +D
Sbjct: 88 AIFDTMQFIKPNVSTLCTGLAASMGAFLLAAGAKGKRFSLPNSRIMIHQPSGGAQGQATD 147
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ + LNG L+ TG+T+E+I DT+RD FMSA+EA+ YG+ID V+
Sbjct: 148 IEIQAKEILYLRERLNGILADKTGRTIEEIRRDTERDNFMSADEAEKYGMIDKVL 202
>gi|315644534|ref|ZP_07897666.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
vortex V453]
gi|315280041|gb|EFU43338.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
vortex V453]
Length = 198
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/177 (62%), Positives = 141/177 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D +AN I+AQ+L+L A DP KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDIHLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT++ I+PDVST+CVG+AASMGAFLL+AG KGKRY LPNS IMIHQPLGGAQG +D
Sbjct: 76 AIFDTMQFIKPDVSTICVGMAASMGAFLLNAGAKGKRYGLPNSEIMIHQPLGGAQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I+++A +L + LN LS TGQ LE+I +DTDRD+FM+A+EAK+YGLID V+ N
Sbjct: 136 IEIRARRILKMRDKLNRILSDRTGQPLERIEKDTDRDYFMTADEAKEYGLIDQVLEN 192
>gi|91787906|ref|YP_548858.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Polaromonas
sp. JS666]
gi|91697131|gb|ABE43960.1| ATP-dependent Clp protease proteolytic subunit ClpP [Polaromonas
sp. JS666]
Length = 218
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/196 (57%), Positives = 153/196 (78%), Gaps = 6/196 (3%)
Query: 96 AQGEQGGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAV 149
AQ QG G PM++ GR + ++ S+L + R+I GPV D AN++VAQLL+L++
Sbjct: 19 AQDAQGLGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDQTANLVVAQLLFLESE 78
Query: 150 DPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS 209
+P+KDI Y+NSPGGSVTAGMAI+DT++ I+PDVST+CVG+AASMGAFLLSAG KGKR+S
Sbjct: 79 NPDKDISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCVGMAASMGAFLLSAGAKGKRFS 138
Query: 210 LPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFF 269
LPNSR+MIHQP GGAQG +DI++ A ++L + LN L+ +TGQ +EKI DT+RD+F
Sbjct: 139 LPNSRVMIHQPSGGAQGQATDIEIHARDILKTRDQLNRILAANTGQPIEKIERDTERDYF 198
Query: 270 MSAEEAKDYGLIDGVV 285
+ AE+AK+YGL+D V+
Sbjct: 199 LFAEDAKEYGLVDQVI 214
>gi|343517775|ref|ZP_08754771.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
pittmaniae HK 85]
gi|343394626|gb|EGV07173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
pittmaniae HK 85]
Length = 195
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 142/177 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L++ DP+KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKERVIFLSGEVEDHMANLIVAQLLFLESEDPDKDINIYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDV T+C+G A SMGAFLL+ GT GKR +LPN+R+MIHQPLGG +G SD
Sbjct: 76 AIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGTAGKRAALPNARVMIHQPLGGFRGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I + A E+L K LN L++HTGQ++E+I +DTDRD FMSA+EAKDYGL+D V++
Sbjct: 136 IQIHAQEILKIKQTLNDRLAFHTGQSIERIEKDTDRDNFMSAQEAKDYGLVDAVLLK 192
>gi|409426236|ref|ZP_11260798.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
HYS]
Length = 213
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 146/192 (76%), Gaps = 6/192 (3%)
Query: 99 EQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPN 152
+ GG PM++ R ++ S+L + R+I GPVED MAN++ AQ+L+L+A +P+
Sbjct: 14 QAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVAAQMLFLEAENPD 73
Query: 153 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 212
KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR+ LPN
Sbjct: 74 KDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPN 133
Query: 213 SRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSA 272
SR+MIHQPLGG QG +DI++ A E+L K+ LN L+YHTGQ LE I DT+RD FMSA
Sbjct: 134 SRVMIHQPLGGFQGQATDIEIHAKEILSIKSRLNELLAYHTGQDLETIKRDTERDNFMSA 193
Query: 273 EEAKDYGLIDGV 284
E A +YGLID V
Sbjct: 194 ERAAEYGLIDSV 205
>gi|337279216|ref|YP_004618688.1| ATP-dependent Clp protease proteolytic subunit [Ramlibacter
tataouinensis TTB310]
gi|334730293|gb|AEG92669.1| candidate ATP-dependent Clp protease proteolytic subunit
(Endopeptidase Clp) [Ramlibacter tataouinensis TTB310]
Length = 202
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R++ GPV D AN++VAQLL+L++ +P+KDI Y+NSPGGSV+AGM
Sbjct: 24 RSYDIYSRLLRERVVFLVGPVNDQTANLVVAQLLFLESENPDKDISFYINSPGGSVSAGM 83
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT+ I+PDVST+C G+AASMGAFLL+AGTKGKR++LPNS++MIHQPLGG QG +D
Sbjct: 84 AIFDTMNFIKPDVSTLCTGMAASMGAFLLAAGTKGKRFALPNSKVMIHQPLGGMQGQATD 143
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A ++L +A LN L+ TGQ LEKI DT+RD+F+SA+E+KDYGL+D V+
Sbjct: 144 IEIHAKDILKTRAQLNKILAERTGQPLEKIERDTERDYFLSADESKDYGLVDQVI 198
>gi|153006264|ref|YP_001380589.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter sp. Fw109-5]
gi|166201797|sp|A7HFV9.1|CLPP_ANADF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|152029837|gb|ABS27605.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter sp. Fw109-5]
Length = 204
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 103/180 (57%), Positives = 147/180 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G P++DD+AN+++AQLL+L++ DP+KDI +Y+NSPGGSVT+G+
Sbjct: 18 RSYDIYSRLLKDRIVFLGTPIDDDVANVVIAQLLFLESEDPDKDISLYINSPGGSVTSGL 77
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++++P VST+C+G AASMGAFLL+ G GKR+++PN+RIMIHQP+GG QG +D
Sbjct: 78 AIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNARIMIHQPMGGFQGQATD 137
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
ID+QA E+L KA LN L+ HT Q LE+I +DTDRD+FM A EAK+YGLID V+++ K
Sbjct: 138 IDIQAREILRLKAKLNDILAKHTKQPLERIEKDTDRDYFMGAGEAKEYGLIDEVIVHKPK 197
>gi|73663232|ref|YP_302013.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|418576800|ref|ZP_13140932.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
gi|124013830|sp|Q49VZ2.1|CLPP_STAS1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|72495747|dbj|BAE19068.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|379324465|gb|EHY91611.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
Length = 194
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 143/176 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVM 286
I++ AN +L +A LN L+ TGQ++EKI +DTDRD F+SAEEAKDYGL+D V++
Sbjct: 136 IEIAANHILKTRAKLNQILAERTGQSIEKIEQDTDRDNFLSAEEAKDYGLVDQVMV 191
>gi|443660052|ref|ZP_21132510.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa DIANCHI905]
gi|159030460|emb|CAO91362.1| clpP2 [Microcystis aeruginosa PCC 7806]
gi|443332568|gb|ELS47168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa DIANCHI905]
Length = 233
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 140/179 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G PV+D +A+ IVAQLLYL+A DP KDI +Y+NSPGGSV AG+
Sbjct: 44 RAFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQLYINSPGGSVYAGL 103
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ IRPDV+T+C GLAASMGAFLL G GKR SLP+SRIMIHQPLGGAQG SD
Sbjct: 104 AIYDTMQQIRPDVATICFGLAASMGAFLLCGGAAGKRMSLPSSRIMIHQPLGGAQGQASD 163
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPH 289
I +QA E+L+ K LN L++HTGQ ++I DT+RDFFMSA EAK+YGLID V+ P
Sbjct: 164 IAIQAKEILYIKQRLNTMLAHHTGQPYDRIANDTERDFFMSAVEAKEYGLIDLVISRPE 222
>gi|444911057|ref|ZP_21231233.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
gi|444718395|gb|ELW59208.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
Length = 201
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/184 (60%), Positives = 146/184 (79%), Gaps = 2/184 (1%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G PV DD+ANIIVAQLL+L++ DP+K I +Y+NSPGGSVTAG+
Sbjct: 15 RAYDLYSRLLKDRIVMLGTPVNDDVANIIVAQLLFLESEDPDKGISLYINSPGGSVTAGL 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++++ VST+C+G AASMGA LL AG+ GKRY+LPNSRIMIHQPLGGAQG SD
Sbjct: 75 AIYDTMQYVKCPVSTICIGQAASMGALLLLAGSPGKRYALPNSRIMIHQPLGGAQGQASD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
ID+QA E+L ++ +NG HTG +E+I +DT+RD+FMSAEEA+ YGLID VV +
Sbjct: 135 IDIQAKEILRLRSYINGLFVKHTGHNIERIEKDTERDYFMSAEEARQYGLIDEVV--SKQ 192
Query: 291 ILQP 294
IL P
Sbjct: 193 ILSP 196
>gi|218289882|ref|ZP_03494072.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius LAA1]
gi|258511244|ref|YP_003184678.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|384134931|ref|YP_005517645.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|218240022|gb|EED07208.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius LAA1]
gi|257477970|gb|ACV58289.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|339289016|gb|AEJ43126.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
Length = 192
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++DD+AN +VAQLL+L A DP+KDI MY+NSPGGSV+AG+
Sbjct: 16 RSYDIYSRLLKDRIIFLGTPIDDDVANAVVAQLLFLAADDPDKDIQMYINSPGGSVSAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++HI+PDVST+CVG+AASM A LL+AG KGKRY+LPNS +MIHQPLGGA+G SD
Sbjct: 76 AIYDTMQHIKPDVSTMCVGMAASMAAVLLAAGAKGKRYALPNSEVMIHQPLGGARGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +L + LN L+ TGQ LE++ +DTDRD FMSAEEAK YGLID V+
Sbjct: 136 IEIHARHILKTRERLNRILAERTGQPLERVAQDTDRDNFMSAEEAKAYGLIDEVI 190
>gi|386012908|ref|YP_005931185.1| protein ClpP [Pseudomonas putida BIRD-1]
gi|397698114|ref|YP_006535997.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
DOT-T1E]
gi|313499614|gb|ADR60980.1| ClpP [Pseudomonas putida BIRD-1]
gi|397334844|gb|AFO51203.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
DOT-T1E]
Length = 192
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 140/174 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPVED MAN++VAQLL+L+A +P+KDI +Y+NSPGGSVTAGM
Sbjct: 11 RAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPDKDIHLYINSPGGSVTAGM 70
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 71 SIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRVMIHQPLGGFQGQATD 130
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++ A E+L+ KA LN L+YHTGQ LE I DT+RD FMSA A +YGLID V
Sbjct: 131 IEIHAQEILNIKARLNELLAYHTGQDLETIKRDTERDNFMSASRAAEYGLIDSV 184
>gi|430751620|ref|YP_007214528.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
gi|430735585|gb|AGA59530.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
Length = 195
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P+ D +AN ++AQ+L+L A DP KDI +Y+NSPGGS+T+GM
Sbjct: 18 RAYDIYSRLLKDRIIFLGTPINDVVANSVIAQMLFLAADDPEKDIHLYINSPGGSITSGM 77
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG+AASMGAFLL+AG GKRY+LPNS +MIHQPLGGA+G SD
Sbjct: 78 AIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAPGKRYALPNSEVMIHQPLGGAEGQASD 137
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I+++A +L + LN LS TGQ LE+I +DTDRD+FMSAEEAK+YGL+D V+
Sbjct: 138 IEIRARRILKMRDKLNKILSERTGQPLERIEKDTDRDYFMSAEEAKNYGLVDKVI 192
>gi|166369013|ref|YP_001661286.1| ATP-dependent Clp protease proteolytic subunit 2 [Microcystis
aeruginosa NIES-843]
gi|390442513|ref|ZP_10230504.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis sp. T1-4]
gi|422303000|ref|ZP_16390356.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9806]
gi|425435289|ref|ZP_18815746.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9432]
gi|425439908|ref|ZP_18820220.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9717]
gi|425452211|ref|ZP_18832029.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 7941]
gi|425458445|ref|ZP_18837933.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9808]
gi|425472440|ref|ZP_18851281.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9701]
gi|440754784|ref|ZP_20933986.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa TAIHU98]
gi|166091386|dbj|BAG06094.1| ATP-dependent Clp protease proteolytic subunit 2 [Microcystis
aeruginosa NIES-843]
gi|389680218|emb|CCH91098.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9432]
gi|389719747|emb|CCH96448.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9717]
gi|389766108|emb|CCI08183.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 7941]
gi|389792060|emb|CCI12154.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9806]
gi|389822691|emb|CCI29606.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9808]
gi|389834168|emb|CCI34630.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis sp. T1-4]
gi|389881467|emb|CCI37973.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9701]
gi|440174990|gb|ELP54359.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa TAIHU98]
Length = 233
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 140/179 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G PV+D +A+ IVAQLLYL+A DP KDI +Y+NSPGGSV AG+
Sbjct: 44 RAFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQLYINSPGGSVYAGL 103
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ IRPDV+T+C GLAASMGAFLL G GKR SLP+SRIMIHQPLGGAQG SD
Sbjct: 104 AIYDTMQQIRPDVATICFGLAASMGAFLLCGGAAGKRMSLPSSRIMIHQPLGGAQGQASD 163
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPH 289
I +QA E+L+ K LN L++HTGQ ++I DT+RDFFMSA EAK+YGLID V+ P
Sbjct: 164 IAIQAKEILYIKQRLNTMLAHHTGQPYDRIANDTERDFFMSAVEAKEYGLIDLVISRPE 222
>gi|192360657|ref|YP_001982472.1| ATP-dependent Clp protease proteolytic subunit [Cellvibrio
japonicus Ueda107]
gi|190686822|gb|ACE84500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cellvibrio
japonicus Ueda107]
Length = 214
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/172 (62%), Positives = 143/172 (83%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I GPVED MAN++VAQLL+L+A +P+KDI +Y+NSPGGSVTAGM+I+
Sbjct: 33 DIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPDKDIHLYINSPGGSVTAGMSIY 92
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G A SMGAFLL+AG +GKR+ LPNSR+MIHQP GGAQG SDI +
Sbjct: 93 DTMQFIKPDVSTMCIGQACSMGAFLLNAGAEGKRFCLPNSRVMIHQPSGGAQGQASDIHI 152
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L +A LN +++H+GQ +E+I DT+RD FMSA++AKDYGLID VV
Sbjct: 153 QAQEILKIRARLNELMAHHSGQPIERIEVDTERDNFMSAQQAKDYGLIDAVV 204
>gi|123967079|ref|YP_001012160.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9515]
gi|123201445|gb|ABM73053.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9515]
Length = 204
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 139/177 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G + D + + +VAQLL+L+A DP+KDI +Y+NSPGGSVTAG+
Sbjct: 26 RAFDIYSRLLRERIIFLGTGINDQVTDSLVAQLLFLEAEDPDKDIQIYINSPGGSVTAGL 85
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I PDV T+C G+AASMGAFLLS G KGKR +LPNSRIMIHQPLGGAQG +
Sbjct: 86 AIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGAQGQAVE 145
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++QA E+L K LN LS HTGQ+LEKINEDT+RD+F+S EEA YGLID V+ N
Sbjct: 146 IEIQAKEILFLKKTLNSLLSEHTGQSLEKINEDTERDYFLSPEEAVQYGLIDKVIKN 202
>gi|284047883|ref|YP_003398222.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidaminococcus fermentans DSM 20731]
gi|283952104|gb|ADB46907.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidaminococcus fermentans DSM 20731]
Length = 197
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 144/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G +ED MAN+I+AQLL+L++ DP+KD+ +Y+NSPGGSV+AG+
Sbjct: 16 RSYDIYSRLLKDRIIFVTGEIEDHMANLIIAQLLFLESEDPDKDVHLYINSPGGSVSAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++IRPDVST+CVG+AASM + LL+AGTKGKRY+LP+SR+MIHQPLGGAQG +D
Sbjct: 76 AIYDTMQYIRPDVSTICVGMAASMASVLLAAGTKGKRYALPHSRVMIHQPLGGAQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L + +N L+ HTGQT E+I DT+RD FM+AEEA +YGLID VV
Sbjct: 136 IEIHAREILRIREEMNQILASHTGQTPEQIRLDTERDHFMTAEEAANYGLIDQVV 190
>gi|342214320|ref|ZP_08707021.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. oral taxon 780 str. F0422]
gi|341594551|gb|EGS37240.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. oral taxon 780 str. F0422]
Length = 199
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GP++D +AN IVAQLL+L++ DP+KDI +Y+NSPGG VTAGM
Sbjct: 17 RSYDIYSRLLKDRIILLSGPIDDTVANSIVAQLLFLESEDPDKDIHLYINSPGGVVTAGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG AASMG+ LL+AG GKRY+LP+SRIMIHQPLGG QG S+
Sbjct: 77 AIYDTMQYIKPDVSTICVGSAASMGSLLLTAGAPGKRYALPHSRIMIHQPLGGVQGQASE 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L + LNG L+YHTGQ +E I +DTDRD FMSAE+AK YGLID V+
Sbjct: 137 IEIHAREILRLREELNGVLAYHTGQPIEVIAQDTDRDNFMSAEDAKRYGLIDEVL 191
>gi|317968359|ref|ZP_07969749.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CB0205]
Length = 194
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/177 (62%), Positives = 140/177 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D +A+ +VAQLL+L+A DP KDI +Y+NSPGGSVTAG+
Sbjct: 14 RAFDIYSRLLRERIIFLGSGIDDQVADAMVAQLLFLEAEDPEKDIQIYVNSPGGSVTAGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ + PDV T+C GLAASMGAFLLS GTKGKR +LPN+RIMIHQPLGGAQG D
Sbjct: 74 AIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++QA E+L+ K LNG +S HTGQ LEKI EDTDRD+F+S EA YGLID VV +
Sbjct: 134 IEIQAKEILYLKETLNGLMSEHTGQPLEKIAEDTDRDYFLSPAEAVQYGLIDRVVTD 190
>gi|169831635|ref|YP_001717617.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Desulforudis audaxviator MP104C]
gi|169638479|gb|ACA59985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Desulforudis audaxviator MP104C]
Length = 198
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 143/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ GGP+ED +AN+I+AQLL+L+A DP+KDI +Y+NSPGG VT+GM
Sbjct: 17 RAYDIYSRLLKDRIVFIGGPIEDHVANLIIAQLLFLEAEDPDKDIHLYINSPGGLVTSGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++IRPDVST+C+G AAS GAFLL+AGT GKR++LP +RIM+HQPLGG QG ++
Sbjct: 77 AIYDTMQYIRPDVSTICLGQAASFGAFLLAAGTPGKRFALPYARIMMHQPLGGVQGQATE 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
ID+ A E+L K LN L+ HTGQ +EKI DT+RDFFMS E+A++YG+ID V+
Sbjct: 137 IDIHAREILRTKRVLNELLAKHTGQPVEKIERDTERDFFMSPEQAREYGIIDEVI 191
>gi|307151649|ref|YP_003887033.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
gi|306981877|gb|ADN13758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
Length = 228
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G ++D++A+ IVAQLLYLDA DP KDI +Y+NSPGGSV AG+
Sbjct: 39 RAFDIYSRLLRERIVFLGTAIDDNVADSIVAQLLYLDAEDPEKDIQLYINSPGGSVYAGL 98
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ IRPDV T+C GLAASMGAFLLS GTKGKR +LP++RIMIHQP+GGAQG +
Sbjct: 99 AIYDTMQQIRPDVVTICFGLAASMGAFLLSGGTKGKRMALPSARIMIHQPIGGAQGQAVE 158
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
ID+QA E+L+ K LN L+ HTGQ E+I EDT+RDF+MS +AKDYGLID V+
Sbjct: 159 IDIQAKEILYIKQRLNSLLAEHTGQPYERIAEDTERDFYMSVHDAKDYGLIDQVI 213
>gi|383784111|ref|YP_005468680.1| ATP-dependent Clp protease, proteolytic subunit [Leptospirillum
ferrooxidans C2-3]
gi|383083023|dbj|BAM06550.1| ATP-dependent Clp protease, proteolytic subunit [Leptospirillum
ferrooxidans C2-3]
Length = 200
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 104/183 (56%), Positives = 151/183 (82%), Gaps = 1/183 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D++AN+++AQLL+L++ D +KDI +Y+NSPGG VTAG
Sbjct: 15 RSYDIYSRLLKERIIFLGTPIDDNVANLVIAQLLFLESEDASKDINIYINSPGGVVTAGF 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG AASMGAFLL+AG KGKR++LPN+R+MIHQPLGG QG +D
Sbjct: 75 AIYDTMQYIKPDVSTICVGQAASMGAFLLAAGAKGKRFALPNARVMIHQPLGGFQGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I + A E+L K++LN L++HTGQ L++I +DT+RD+F+SA+E+KDYGL+D VM+ H
Sbjct: 135 IAIHAKEILKMKSHLNELLAHHTGQALQRIEQDTERDYFLSADESKDYGLVDK-VMSSHG 193
Query: 291 ILQ 293
+ +
Sbjct: 194 LTE 196
>gi|443476633|ref|ZP_21066529.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena
biceps PCC 7429]
gi|443018385|gb|ELS32644.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena
biceps PCC 7429]
Length = 223
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/183 (60%), Positives = 144/183 (78%), Gaps = 1/183 (0%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G V+D AN+I++QLL+L+A DP+KDI +Y+NSPGGSV AGMAI
Sbjct: 38 DIFSRLLRERIVFLGSQVDDTTANLIMSQLLFLEAEDPDKDIYLYINSPGGSVYAGMAIL 97
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+ H+RPDV T+C+GLAASMGAFLL++G KGKR SLPN+RIMIHQPLGGAQG DI++
Sbjct: 98 DTMNHVRPDVCTICMGLAASMGAFLLASGAKGKRMSLPNARIMIHQPLGGAQGQAVDIEI 157
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQ 293
QA E+L+ K +LN L+ TG+ +E+I +DT+RDFFMS EA+ YGLID V+ N K Q
Sbjct: 158 QAREILYIKRSLNEMLATSTGKPIEQIEQDTERDFFMSPAEAQQYGLIDQVLTN-SKGFQ 216
Query: 294 PVA 296
P A
Sbjct: 217 PSA 219
>gi|115374393|ref|ZP_01461676.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|310824399|ref|YP_003956757.1| ATP-dependent CLP protease proteolytic subunit 2 [Stigmatella
aurantiaca DW4/3-1]
gi|115368595|gb|EAU67547.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|309397471|gb|ADO74930.1| ATP-dependent Clp protease proteolytic subunit 2 [Stigmatella
aurantiaca DW4/3-1]
Length = 200
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 146/178 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P+ D++AN++VAQ+L+L++ DP K I +Y+NSPGGSVTAG+
Sbjct: 15 RAYDLYSRLLKDRIIMLGVPINDEVANVVVAQMLFLESEDPEKGINIYINSPGGSVTAGL 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++++ VST+CVG AASMGA LL AG+KGKRY+LPN+RIMIHQPLGGAQG +D
Sbjct: 75 AIYDTMQYVKCPVSTICVGQAASMGALLLLAGSKGKRYALPNARIMIHQPLGGAQGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
ID+QA E+L KA LNG + HTG T+E+I +DT+RD+FMSA++A+ YG+ID VV+ P
Sbjct: 135 IDIQAKEILRLKAYLNGIIVKHTGHTIERIEKDTERDYFMSADDARQYGIIDEVVVKP 192
>gi|434388321|ref|YP_007098932.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chamaesiphon
minutus PCC 6605]
gi|428019311|gb|AFY95405.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chamaesiphon
minutus PCC 6605]
Length = 215
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GG V D +A+ +VAQ+L+L+A DP KDI +Y+NSPGGS+TAGM
Sbjct: 38 RAFDLYSRLLRERIIFLGGEVNDGVADTLVAQMLFLEAEDPEKDIQLYINSPGGSITAGM 97
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ IRPDV+T C GLAASMGAFLL++G GKR SLPNSRIMIHQPLGGAQG D
Sbjct: 98 AIYDTMQQIRPDVATTCYGLAASMGAFLLASGAPGKRRSLPNSRIMIHQPLGGAQGQAVD 157
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K +LNG L+YHTGQ +E+I EDT+RDF+MS E + YGLID +
Sbjct: 158 IEIQAREILYLKNHLNGLLAYHTGQPIERIAEDTERDFWMSPAETQAYGLIDETI 212
>gi|434399019|ref|YP_007133023.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
gi|428270116|gb|AFZ36057.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
Length = 227
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 141/174 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G P++D +A+ IVAQLLYL+A DP KDI +Y+NSPGGSV +GMAI+
Sbjct: 41 DIYSRLLRERIVFLGTPIDDKVADSIVAQLLYLEAEDPEKDIQLYINSPGGSVYSGMAIY 100
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PD+ T+C G+AASMGAFLLS GTKGKR +LP+SRIMIHQPLGGAQG DI++
Sbjct: 101 DTMQQIQPDIVTICYGIAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGAQGQAVDIEI 160
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
QA E+L+ K LN ++ HTGQ EK+ DT+RDF+MSA+EA++YGLID V++
Sbjct: 161 QAREILYIKKRLNDLIAEHTGQPFEKVAADTERDFYMSAQEAQEYGLIDQVIIR 214
>gi|37523335|ref|NP_926712.1| ATP-dependent Clp protease proteolytic subunit [Gloeobacter
violaceus PCC 7421]
gi|60389714|sp|Q7NEW2.1|CLPP1_GLOVI RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|35214339|dbj|BAC91707.1| clpP [Gloeobacter violaceus PCC 7421]
Length = 197
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/174 (63%), Positives = 141/174 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ ++L RII G V+D++AN I+A +LYLD+ DP KDI +Y+NSPGGSV+AG+AI+
Sbjct: 21 DIFNRLALDRIIFLGREVDDEIANAIIASMLYLDSEDPEKDIFLYINSPGGSVSAGLAIY 80
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++H+R DV+T+CVGLAASMG+FLL+AG KGKR SLP+SRIMIHQPLGGAQG +DI +
Sbjct: 81 DTMQHVRADVATMCVGLAASMGSFLLTAGAKGKRTSLPHSRIMIHQPLGGAQGQATDIGI 140
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
QA E+L+ K LN LS TGQ LE+I DTDRDFFMSAE+AK YGLID VV +
Sbjct: 141 QAKEILYTKDRLNQILSERTGQPLERIERDTDRDFFMSAEDAKQYGLIDQVVQH 194
>gi|451822957|ref|YP_007459231.1| ATP-dependent Clp, protease subunit [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451775757|gb|AGF46798.1| ATP-dependent Clp, protease subunit [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 215
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GP++D++AN++VAQ+L+L++ DPNKDI +Y+NSPGGS+ AGM
Sbjct: 38 RAYDIYSRLLKERIIFLVGPIDDNIANLVVAQMLFLESEDPNKDINIYINSPGGSIYAGM 97
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT+ ++PDVST+C+GLAASMGAFLLSAG KGKR+SLPNS IMIHQP GGA G +D
Sbjct: 98 AIFDTMMFVKPDVSTICIGLAASMGAFLLSAGKKGKRFSLPNSSIMIHQPSGGANGQATD 157
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN +S +TG+++E+I+EDTDRD FMSAEEA YGLID VV
Sbjct: 158 IQIHAKEILRLKNRLNFIMSENTGKSIEEISEDTDRDNFMSAEEALSYGLIDMVV 212
>gi|300715591|ref|YP_003740394.1| ATP-dependent Clp protease proteolytic subunit [Erwinia billingiae
Eb661]
gi|299061427|emb|CAX58539.1| ATP-dependent Clp protease proteolytic subunit [Erwinia billingiae
Eb661]
Length = 215
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 37 RSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYINSPGGVITAGM 96
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AGTKGKRY+LPNSR+MIHQPLGG QG +D
Sbjct: 97 SIYDTMKFIKPDVSTICMGQACSMGAFLLTAGTKGKRYALPNSRVMIHQPLGGYQGQATD 156
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ HTG+TLE+I DT+RD F+SA EA +YGL+D V+
Sbjct: 157 IEIHAREILKVKARMNELMAEHTGKTLEEIERDTERDRFLSASEAVEYGLVDSVL 211
>gi|77360986|ref|YP_340561.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
haloplanktis TAC125]
gi|110816463|sp|Q3IF46.1|CLPP_PSEHT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|76875897|emb|CAI87118.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
(Caseinolytic protease) (Protease Ti)(Heat shock protein
F21.5) [Pseudoalteromonas haloplanktis TAC125]
Length = 205
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 142/177 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GPVED+MAN+I+AQ+L+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKERIIFLTGPVEDNMANLILAQMLFLESENPDKDIFLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDVST+CVG AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 85 AIYDTMNFIKPDVSTICVGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
++ A E+L K LN ++ HTGQ L+ I++DTDRD FMSA++A DYG++D V N
Sbjct: 145 FEIHAKEILSIKDKLNRLMAEHTGQPLDVISKDTDRDNFMSADQAVDYGIVDSVFKN 201
>gi|253575504|ref|ZP_04852841.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
gi|251845151|gb|EES73162.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
Length = 198
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/202 (57%), Positives = 148/202 (73%), Gaps = 9/202 (4%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
YIP + G R ++ S+L + RII G V D +AN I+AQ+L+LDA D
Sbjct: 3 YIPMVVEQSNRGE-------RAYDIYSRLLKDRIIFLGSQVNDVVANSIIAQMLFLDAED 55
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P KDI +Y+NSPGGS+TAGMAI+DT++ I+ DVST+CVGLAASMGAFLL+AG GKRY+L
Sbjct: 56 PTKDIHLYINSPGGSITAGMAIYDTMQFIKADVSTICVGLAASMGAFLLNAGAPGKRYAL 115
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
PNS IMIHQPLGGA+G +DI+++A +L + LN LS TGQ LE+I +DTDRD+FM
Sbjct: 116 PNSEIMIHQPLGGAEGQATDIEIRARRILKMRDKLNRILSERTGQPLERIEKDTDRDYFM 175
Query: 271 SAEEAKDYGLIDGVV--MNPHK 290
SA EAK+YGLID V+ +NP K
Sbjct: 176 SAAEAKEYGLIDQVIEKVNPAK 197
>gi|383454037|ref|YP_005368026.1| ATP-dependent Clp protease proteolytic subunit [Corallococcus
coralloides DSM 2259]
gi|380732364|gb|AFE08366.1| ATP-dependent Clp protease proteolytic subunit [Corallococcus
coralloides DSM 2259]
Length = 206
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/182 (58%), Positives = 146/182 (80%), Gaps = 1/182 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G ++DD+AN IVAQLL+L++ DP+KDI +Y+NSPGGSVTAG+
Sbjct: 18 RSYDIYSRLLKDRIVMLGTEIDDDVANAIVAQLLFLESEDPDKDINLYINSPGGSVTAGL 77
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++++ VST+CVG AASMGA LL AG KGKRYSLP+SRIMIHQPLGGA+G +D
Sbjct: 78 AIYDTMQYVKAPVSTICVGQAASMGAVLLLAGAKGKRYSLPSSRIMIHQPLGGARGQATD 137
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L KA LN + HTGQT+E++ +DTDRD+FM A EAK YG+ID + +P K
Sbjct: 138 IEIQAREILRMKAKLNELIVKHTGQTIERVEKDTDRDYFMGAAEAKAYGIIDS-IQDPRK 196
Query: 291 IL 292
++
Sbjct: 197 VV 198
>gi|392551110|ref|ZP_10298247.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
spongiae UST010723-006]
Length = 203
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED+MAN+IVAQLL+L++ +P KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKERVIFLTGQVEDNMANLIVAQLLFLESENPEKDIFIYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+P++STVC+G AASMGAFLLS GTKGKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 85 AIYDTMKFIKPNISTVCIGQAASMGAFLLSGGTKGKRFCLPNSRVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
++ A E+L K LN ++ HTGQ LE ++ DTDRD FMSA++A DYGL+DG++
Sbjct: 145 FEIHAKEILSIKDKLNRLMAEHTGQPLEVVSNDTDRDNFMSAQQAVDYGLVDGIL 199
>gi|348028491|ref|YP_004871177.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Glaciecola
nitratireducens FR1064]
gi|347945834|gb|AEP29184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Glaciecola
nitratireducens FR1064]
Length = 210
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 151/214 (70%), Gaps = 7/214 (3%)
Query: 80 IRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANII 139
+ N + P S +P + G R ++ S+L + +I G VED MAN+I
Sbjct: 1 MTNIITEPHSALVPMVVEQTARGE-------RSYDIYSRLLKENVIFMVGQVEDHMANLI 53
Query: 140 VAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLL 199
VAQ+L+L+A +P KDI +Y+NSPGGSVTAGMAI+DT+ I+PDVSTVC+G AASMGAFLL
Sbjct: 54 VAQMLFLEAENPEKDIFLYINSPGGSVTAGMAIYDTMNFIKPDVSTVCIGQAASMGAFLL 113
Query: 200 SAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEK 259
SAG KGKRY LPN+R+MIHQPLGG QG SD ++ A E+L K +N ++ HTGQ EK
Sbjct: 114 SAGAKGKRYCLPNARVMIHQPLGGFQGQASDFEIHAKEILSIKEKMNRLMAEHTGQDYEK 173
Query: 260 INEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQ 293
+ +DTDRD F+SA+E+ DYGL+D V+ N ++L+
Sbjct: 174 VAKDTDRDNFLSAQESVDYGLVDSVMANRAEVLK 207
>gi|332529294|ref|ZP_08405256.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Hylemonella
gracilis ATCC 19624]
gi|332041211|gb|EGI77575.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Hylemonella
gracilis ATCC 19624]
Length = 194
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 143/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPV D AN++VAQLL+L++ +P+K+I +Y+NSPGGSV+AGM
Sbjct: 16 RSYDIYSRLLRERVIFLVGPVNDQTANLVVAQLLFLESENPDKEISLYINSPGGSVSAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+IFDT+ I+PDVST+C+G+AASMGAFLL+AG KGKR+SLPNS+IMIHQPLGGAQG ++
Sbjct: 76 SIFDTMNFIKPDVSTLCIGMAASMGAFLLAAGAKGKRFSLPNSKIMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L + LN L+ TGQ LEKI DT+RD+++SA+EAKDYGL+D V+
Sbjct: 136 IEIHAREILKTREQLNKILAERTGQPLEKIERDTERDYYLSADEAKDYGLVDQVI 190
>gi|406597483|ref|YP_006748613.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii ATCC 27126]
gi|407684497|ref|YP_006799671.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'English Channel 673']
gi|407688425|ref|YP_006803598.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'Balearic Sea AD45']
gi|407700789|ref|YP_006825576.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'Black Sea 11']
gi|406374804|gb|AFS38059.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii ATCC 27126]
gi|407246108|gb|AFT75294.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'English Channel 673']
gi|407249936|gb|AFT79121.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'Black Sea 11']
gi|407291805|gb|AFT96117.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'Balearic Sea AD45']
Length = 209
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 138/177 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + +I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKENVIFLVGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVSTVC+G AASMGAFLLSAG KGKRY LPNSR+MIHQPLGG QG SD
Sbjct: 85 AIYDTMKFIKPDVSTVCMGQAASMGAFLLSAGAKGKRYCLPNSRVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
++ A E+L K LN ++ HTGQ EK+ DTDRD F+SA EAK+YGL+D V+ N
Sbjct: 145 FEIHAKEILSIKEKLNRLMADHTGQDYEKVARDTDRDNFLSATEAKEYGLVDQVLAN 201
>gi|399018228|ref|ZP_10720412.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Herbaspirillum sp. CF444]
gi|398101864|gb|EJL92064.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Herbaspirillum sp. CF444]
Length = 208
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/175 (62%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GPV D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 30 RAYDIYSRLLKERIIFLVGPVNDATANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 89
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT++ I+PDVST+C GLAASMGAFLL+AG KGKR+SLPNSRIMIHQPLGGAQG SD
Sbjct: 90 AIFDTMQFIKPDVSTLCTGLAASMGAFLLAAGAKGKRFSLPNSRIMIHQPLGGAQGQASD 149
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ + LN L+ TG+T ++I +DTDRD FMSA A +YGLID V+
Sbjct: 150 IEIQAREILYLRERLNVILAEKTGRTTDQIGKDTDRDNFMSATAAAEYGLIDQVL 204
>gi|340787626|ref|YP_004753091.1| ATP-dependent Clp protease proteolytic subunit [Collimonas
fungivorans Ter331]
gi|340552893|gb|AEK62268.1| ATP-dependent Clp protease proteolytic subunit [Collimonas
fungivorans Ter331]
Length = 208
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 146/175 (83%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GPV D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 30 RSYDIYSRLLRERIIFLVGPVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 89
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ ++P++ST+C G+AASMGAFLL+AG KGKR+SLPNSRIMIHQPLGGAQG SD
Sbjct: 90 AIYDTMQFVKPEISTLCTGMAASMGAFLLAAGAKGKRFSLPNSRIMIHQPLGGAQGQASD 149
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ + LNG L+ TG+++E+I++DTDRD FMSA+ A +YGLID V+
Sbjct: 150 IEIQAREILYLRERLNGILADKTGRSIEQISKDTDRDNFMSADAAVEYGLIDKVL 204
>gi|427412668|ref|ZP_18902860.1| ATP-dependent Clp protease proteolytic subunit [Veillonella ratti
ACS-216-V-Col6b]
gi|425716475|gb|EKU79459.1| ATP-dependent Clp protease proteolytic subunit [Veillonella ratti
ACS-216-V-Col6b]
Length = 197
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 143/178 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ GGP+ DD+AN+++AQLL+L+A DP+KDI +Y+NSPGG VTAGM
Sbjct: 15 RSYDIYSRLLKDRIVFLGGPINDDVANLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGM 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG AASMGA LL+AG KGKRY+LP++R+MIHQPLGG QG S+
Sbjct: 75 AIYDTMQYIKPDVSTICVGSAASMGAVLLTAGAKGKRYALPHARVMIHQPLGGVQGQASE 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
I++ A E+L + LNG L+ H+GQ ++ I DTDRD FMSAE+A YGLID V+ P
Sbjct: 135 IEIHAREILRMREELNGLLASHSGQPIDVIARDTDRDNFMSAEDAVKYGLIDEVLTRP 192
>gi|217967475|ref|YP_002352981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
turgidum DSM 6724]
gi|217336574|gb|ACK42367.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
turgidum DSM 6724]
Length = 194
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G + D++AN+IVAQLL+L++ DP KDI +Y+NSPGG V+AG+
Sbjct: 15 RAYDIYSRLLKSRIVFLGTTINDEVANLIVAQLLFLESEDPEKDIYLYINSPGGEVSAGL 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTIRHI+P V+TVCVG AASM A LL+AG KGKRY+LP+SR+MIHQPLGGA G +D
Sbjct: 75 AIYDTIRHIKPKVATVCVGQAASMAAILLAAGDKGKRYALPHSRVMIHQPLGGAYGPAAD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ E+L K LN L+YHTGQ +EKI +DTDRDFFMSA EAK+YG++D V+
Sbjct: 135 IEIHTREILKIKRVLNEILAYHTGQPIEKIEKDTDRDFFMSAYEAKEYGIVDEVL 189
>gi|255323211|ref|ZP_05364346.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
showae RM3277]
gi|424783006|ref|ZP_18209849.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
showae CSUNSWCD]
gi|255299734|gb|EET79016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
showae RM3277]
gi|421959149|gb|EKU10760.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
showae CSUNSWCD]
Length = 196
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 141/180 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G +ED MA+ IVAQ+L+L+A DP+KDI +Y+NSPGG +T+G
Sbjct: 17 RSYDIYSRLLKDRIIMLSGEIEDGMASAIVAQMLFLEAEDPDKDIYLYINSPGGVITSGF 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ +I+PDV T+C+G AASMGAFLLS G +GKRY+LPNSRIMIHQPLGGA+G +D
Sbjct: 77 SIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAQGKRYALPNSRIMIHQPLGGARGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L K LN L+ +TGQ L KI +DTDRDFFMS+ EAK+YGLID V+ K
Sbjct: 137 IEIQAKEILRMKEILNAILAKNTGQKLAKIQKDTDRDFFMSSAEAKEYGLIDKVLEKSFK 196
>gi|197117660|ref|YP_002138087.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
bemidjiensis Bem]
gi|226706452|sp|B5EI27.1|CLPP_GEOBB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|197087020|gb|ACH38291.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
bemidjiensis Bem]
Length = 199
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GG ++D++AN+++AQLL+L+A DP+KDI +Y+NSPGG VTAGM
Sbjct: 15 RSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGM 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+R+I+ VST+CVG AASMGAFLLS G KGKRYSL NSRIMIHQPLGG QG +D
Sbjct: 75 AIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIMIHQPLGGFQGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ HTGQ++EK+ DT+RD+FMS EEAK+YG+ID +V
Sbjct: 135 IHIHAKEILRMKDQLNALLAEHTGQSVEKVAADTERDYFMSGEEAKNYGIIDAIV 189
>gi|107028898|ref|YP_625993.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia AU 1054]
gi|115351962|ref|YP_773801.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
ambifaria AMMD]
gi|116689944|ref|YP_835567.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia HI2424]
gi|170702050|ref|ZP_02892966.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
ambifaria IOP40-10]
gi|170733282|ref|YP_001765229.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia MC0-3]
gi|171320790|ref|ZP_02909797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
ambifaria MEX-5]
gi|172060888|ref|YP_001808540.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
ambifaria MC40-6]
gi|206560359|ref|YP_002231123.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia J2315]
gi|402566278|ref|YP_006615623.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cepacia GG4]
gi|421866865|ref|ZP_16298527.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia H111]
gi|116243129|sp|Q1BH85.1|CLPP_BURCA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122322952|sp|Q0BEF6.1|CLPP_BURCM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201802|sp|A0K847.1|CLPP_BURCH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|105898062|gb|ABF81020.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
cenocepacia AU 1054]
gi|115281950|gb|ABI87467.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
ambifaria AMMD]
gi|116648033|gb|ABK08674.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
cenocepacia HI2424]
gi|169816524|gb|ACA91107.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
cenocepacia MC0-3]
gi|170133036|gb|EDT01448.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
ambifaria IOP40-10]
gi|171093960|gb|EDT39074.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
ambifaria MEX-5]
gi|171993405|gb|ACB64324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
ambifaria MC40-6]
gi|198036400|emb|CAR52296.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia J2315]
gi|358073029|emb|CCE49405.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia H111]
gi|402247475|gb|AFQ47929.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cepacia GG4]
Length = 217
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 145/177 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R++ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 39 RSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 98
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR++LPNSR+MIHQPLGGA+G SD
Sbjct: 99 AIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASD 158
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++QA E+L+ K LN L+ HTGQ +E+I DTDRD FMS+E+AK YGLID V++
Sbjct: 159 IEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVLLK 215
>gi|444363684|ref|ZP_21164096.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia cenocepacia BC7]
gi|444369902|ref|ZP_21169607.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia cenocepacia K56-2Valvano]
gi|443594526|gb|ELT63169.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia cenocepacia BC7]
gi|443598384|gb|ELT66748.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia cenocepacia K56-2Valvano]
Length = 208
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 145/177 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R++ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 30 RSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 89
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR++LPNSR+MIHQPLGGA+G SD
Sbjct: 90 AIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASD 149
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++QA E+L+ K LN L+ HTGQ +E+I DTDRD FMS+E+AK YGLID V++
Sbjct: 150 IEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVLLK 206
>gi|357013904|ref|ZP_09078903.1| ClpP1 [Paenibacillus elgii B69]
Length = 193
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P+ D +AN I+AQ+L+L A DP+KDI +Y+NSPGGS+T+GM
Sbjct: 16 RAYDIYSRLLKDRIIFLGSPINDVVANSIIAQMLFLAATDPDKDISVYINSPGGSITSGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+CVG+AASMGAFLL+AG KGKR++LPNS +MIHQPLGGA+G SD
Sbjct: 76 AIYDTMQFIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGAEGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I+++A +L + LN L+ TGQ+ E+I +DTDRD FMSAE+AK+YGLID V+
Sbjct: 136 IEIRAKRILKMRDKLNTILAERTGQSFERIEKDTDRDNFMSAEDAKNYGLIDKVI 190
>gi|78066693|ref|YP_369462.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp.
383]
gi|167586932|ref|ZP_02379320.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
ubonensis Bu]
gi|90101404|sp|Q39FE8.1|CLPP_BURS3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77967438|gb|ABB08818.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
sp. 383]
Length = 217
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 145/177 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R++ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 39 RSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 98
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR++LPNSR+MIHQPLGGA+G SD
Sbjct: 99 AIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASD 158
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++QA E+L+ K LN L+ HTGQ +E+I DTDRD FMS+E+AK YGLID V++
Sbjct: 159 IEIQAREILYLKERLNQLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVLLK 215
>gi|422299469|ref|ZP_16387036.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
avellanae BPIC 631]
gi|407988618|gb|EKG31111.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
avellanae BPIC 631]
Length = 192
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPVED MAN+I AQLL+L+A +P+KDI +Y+NSPGGSVTAGM
Sbjct: 11 RAYDIYSRLLKERVIFMVGPVEDYMANLIAAQLLFLEAENPDKDIHLYINSPGGSVTAGM 70
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+ G +GKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 71 SIYDTMQFIKPDVSTICIGQACSMGAFLLAGGAEGKRHCLPNSRMMIHQPLGGFQGQASD 130
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
ID+ A E+LH + LN L++HTGQ+LE I DT+RD FMSAE A +YGLID V+
Sbjct: 131 IDIHAKEILHIRHRLNSLLAHHTGQSLETIERDTERDNFMSAERAAEYGLIDSVI 185
>gi|157369338|ref|YP_001477327.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
proteamaculans 568]
gi|157321102|gb|ABV40199.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
proteamaculans 568]
Length = 207
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAESPEKDIFLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMG+FLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMKFIKPDVSTICMGQACSMGSFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ HTGQTLE+I DT+RD FM+AEEA +YGL+DG++
Sbjct: 149 IEIHAREILKVKARMNELMAEHTGQTLEQIERDTERDRFMTAEEAVEYGLVDGIL 203
>gi|171059225|ref|YP_001791574.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptothrix
cholodnii SP-6]
gi|226706459|sp|B1Y6H3.1|CLPP_LEPCP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|170776670|gb|ACB34809.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptothrix
cholodnii SP-6]
Length = 202
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPV D AN++VAQLL+L++ +P+KDI Y+NSPGGSV+AGM
Sbjct: 24 RAYDIYSRLLRERVIFLVGPVNDQSANLVVAQLLFLESENPDKDISFYINSPGGSVSAGM 83
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+P VST+C+GLAASMGAFLL+AG KGKR+SLPNS+IMIHQPLGGAQG +D
Sbjct: 84 SIYDTMQFIKPQVSTLCMGLAASMGAFLLAAGAKGKRFSLPNSKIMIHQPLGGAQGQATD 143
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L + LN L+ TGQ+LEKI DT+RD+FMS+EEA+ YGLID V+
Sbjct: 144 IEIHAREILKTREQLNRILAERTGQSLEKIQNDTERDYFMSSEEAQTYGLIDQVI 198
>gi|254361750|ref|ZP_04977885.1| S14 family endopeptidase ClpP [Mannheimia haemolytica PHL213]
gi|452745422|ref|ZP_21945257.1| ATP-dependent Clp protease proteolytic subunit [Mannheimia
haemolytica serotype 6 str. H23]
gi|153093285|gb|EDN74281.1| S14 family endopeptidase ClpP [Mannheimia haemolytica PHL213]
gi|452086571|gb|EME02959.1| ATP-dependent Clp protease proteolytic subunit [Mannheimia
haemolytica serotype 6 str. H23]
Length = 197
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/181 (59%), Positives = 143/181 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED+MAN+IVAQLL+L+A DP KDI +Y+NSPGG VTAG+
Sbjct: 16 RSYDIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPGGVVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDV+T+C G AASMGAFLLSAG KGKR++LP++RIMIHQPLGGA+G +D
Sbjct: 76 AIYDTMNFIKPDVATLCTGQAASMGAFLLSAGAKGKRFALPHARIMIHQPLGGARGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I +QA E+L KA L ++ H+GQ+ EK+ DT+RD FMSAEEA +YGLID V+ + +
Sbjct: 136 IQIQAEEILRLKATLTRRMAEHSGQSYEKVLADTERDNFMSAEEAAEYGLIDKVLTSRSE 195
Query: 291 I 291
+
Sbjct: 196 V 196
>gi|212696598|ref|ZP_03304726.1| hypothetical protein ANHYDRO_01138 [Anaerococcus hydrogenalis DSM
7454]
gi|325847156|ref|ZP_08169955.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|212676329|gb|EEB35936.1| hypothetical protein ANHYDRO_01138 [Anaerococcus hydrogenalis DSM
7454]
gi|325480936|gb|EGC83982.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 195
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/175 (62%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GPVED +++II+AQLL+L++ DPNKDI Y+NSPGG VTAG+
Sbjct: 20 RAYDIYSRLLKDRIIFLTGPVEDGVSDIIIAQLLFLESQDPNKDIQFYINSPGGVVTAGL 79
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ +I+PDVST+C+G AASMGA LLS+G KGKR+SLPNS I+IHQP GGAQG SD
Sbjct: 80 AIYDTMNYIKPDVSTICIGQAASMGAVLLSSGAKGKRFSLPNSNILIHQPSGGAQGQASD 139
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I +QA ++L K LN LS +TGQT+EKI +DTDRDF M A EAK+YGLID V+
Sbjct: 140 IQIQAEQILKIKKRLNKILSDNTGQTIEKIQKDTDRDFSMDAYEAKEYGLIDKVI 194
>gi|350564171|ref|ZP_08932990.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalimicrobium aerophilum AL3]
gi|349778171|gb|EGZ32530.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalimicrobium aerophilum AL3]
Length = 201
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 140/172 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I GPVED MAN+IVAQ+L+L++ +P KDI +Y+NSPGGSVTAGMAI+
Sbjct: 26 DIYSRLLKERVIFLVGPVEDHMANLIVAQMLFLESENPEKDIHLYINSPGGSVTAGMAIY 85
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+R I+PDVST+C+G AASMG+FLL+AG KGKR++LPNSR+MIHQPLGG QG SD ++
Sbjct: 86 DTMRFIKPDVSTMCLGQAASMGSFLLAAGAKGKRFALPNSRVMIHQPLGGFQGQASDFEI 145
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K LN LS +TGQ LE I DTDRD FMSAE+AK+YGLID V+
Sbjct: 146 HAREILFIKDKLNKALSENTGQPLEVIERDTDRDNFMSAEKAKEYGLIDQVL 197
>gi|386824461|ref|ZP_10111596.1| ATP-dependent Clp protease proteolytic subunit [Serratia plymuthica
PRI-2C]
gi|386378672|gb|EIJ19474.1| ATP-dependent Clp protease proteolytic subunit [Serratia plymuthica
PRI-2C]
Length = 207
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAESPEKDIFLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMG+FLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMKFIKPDVSTICMGQACSMGSFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ HTGQTLE+I DT+RD FM+AEEA +YGL+DG++
Sbjct: 149 IEIHAREILKVKARMNELMAEHTGQTLEQIERDTERDRFMTAEEAVEYGLVDGIL 203
>gi|325294216|ref|YP_004280730.1| ATP-dependent Clp protease proteolytic subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064664|gb|ADY72671.1| ATP-dependent Clp protease proteolytic subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 200
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +AN+IVAQLL+L+A DP KDI +Y+NSPGG VTAG+
Sbjct: 21 RAYDIYSRLLKDRIIMLGTPIDDHVANLIVAQLLFLEAEDPEKDIYLYINSPGGVVTAGL 80
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDV T+C+G AASMGA LL+AG KGKR++LP++RIMIHQPLGG QG +D
Sbjct: 81 AIYDTMQYIKPDVVTICLGQAASMGAVLLAAGAKGKRFALPHARIMIHQPLGGFQGQATD 140
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L K LN LS HTGQ+L KI +DT+RD+FMSAEEA+ YGLID V+
Sbjct: 141 IEIHAKEILRLKKMLNEILSKHTGQSLRKIEKDTERDYFMSAEEAQKYGLIDKVL 195
>gi|444912991|ref|ZP_21233148.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
gi|444716404|gb|ELW57255.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
Length = 205
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/184 (57%), Positives = 147/184 (79%), Gaps = 1/184 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G ++DD+AN+IV+QLL+L++ DP+KDI +Y+NSPGGSVTAG+
Sbjct: 18 RSYDIYSRLLKDRIVMLGTEIDDDVANVIVSQLLFLESEDPDKDINLYINSPGGSVTAGL 77
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++++P+VST+CVG AASMGA LL AG KGKRY+LP+SRIMIHQPLGG +G +D
Sbjct: 78 AIYDTMQYVKPNVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQPLGGVRGQATD 137
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L +A LN + HTGQ +E++ +DTDRD+FM A EAK YG++D V NP K
Sbjct: 138 IEIQAKEILRMRAKLNELIVKHTGQPIERVEKDTDRDYFMGAAEAKAYGILDE-VQNPRK 196
Query: 291 ILQP 294
I P
Sbjct: 197 IPLP 200
>gi|422344962|ref|ZP_16425885.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
F0398]
gi|355376104|gb|EHG23365.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
F0398]
Length = 203
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 107/178 (60%), Positives = 143/178 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP++D +AN++VAQ+L+L++ DP+KDI +Y+NSPGG VTAG+
Sbjct: 17 RAYDIYSRLLKERIIFLGGPIDDSVANVVVAQMLFLESEDPDKDIHLYINSPGGVVTAGL 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G AASMG+ LL+AG K KRY+LP++RIMIHQPLGGAQG +D
Sbjct: 77 AIYDTMQYIKPDVSTICIGQAASMGSILLTAGAKAKRYALPHARIMIHQPLGGAQGQSTD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
I +QA E+L + N L+ HTGQ +KIN DT+RD FMSAEEAK YGLID VV P
Sbjct: 137 IQIQAKEILRLREVGNHILARHTGQDEKKINVDTERDNFMSAEEAKAYGLIDEVVTRP 194
>gi|410666834|ref|YP_006919205.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermacetogenium phaeum DSM 12270]
gi|409104581|gb|AFV10706.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermacetogenium phaeum DSM 12270]
Length = 201
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +ANII+AQ+L+L+A DP KDI +Y+NSPGGS+TAG+
Sbjct: 20 RSYDIYSRLLKDRIIFLGTPIDDSVANIIIAQMLFLEAEDPEKDIYLYINSPGGSITAGL 79
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT+R+++PDVST+CVG+AASMGAFLL+AG K KR++ PNS IMIHQP+GGAQG +D
Sbjct: 80 AIFDTMRYVKPDVSTICVGMAASMGAFLLAAGAKKKRFATPNSEIMIHQPMGGAQGQATD 139
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
+++ A ++ + LN L+ TGQ++E+I+ DTDRD FM AEEAK+YG+ID V+
Sbjct: 140 VEIHARRIVKVRDRLNRILAELTGQSVERISRDTDRDTFMDAEEAKEYGIIDEVI 194
>gi|333977877|ref|YP_004515822.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333821358|gb|AEG14021.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 197
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP++D +AN+++AQ+L+L+A DP KDI Y+NSPGG VTAG+
Sbjct: 17 RAYDIYSRLLKDRIIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHFYINSPGGVVTAGL 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G AASMG+FLL+AG KGKRY+LP +RIM+HQPLGG QG ++
Sbjct: 77 AIYDTMQYIKPDVSTICLGQAASMGSFLLAAGAKGKRYALPYARIMLHQPLGGVQGQATE 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L K LN L+ HTGQ EKI DTDRDFFMSAEEAK+YG+ID V+
Sbjct: 137 IEIHAREILRIKDILNELLAKHTGQPREKIARDTDRDFFMSAEEAKEYGIIDEVL 191
>gi|253701609|ref|YP_003022798.1| ATP-dependent Clp protease proteolytic subunit [Geobacter sp. M21]
gi|259585955|sp|C6E2T0.1|CLPP_GEOSM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|251776459|gb|ACT19040.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M21]
Length = 199
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GG ++D++AN+++AQLL+L+A DP+KDI +Y+NSPGG VTAGM
Sbjct: 15 RSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGM 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+R+I+ VST+CVG AASMGAFLLS G KGKRYSL NSRIMIHQPLGG QG +D
Sbjct: 75 AIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIMIHQPLGGFQGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ HTGQ++EK+ DT+RD+FMS EEAK+YG+ID +V
Sbjct: 135 IHIHAKEILRMKDELNALLAEHTGQSVEKVAADTERDYFMSGEEAKNYGIIDAIV 189
>gi|333892289|ref|YP_004466164.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas sp.
SN2]
gi|332992307|gb|AEF02362.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas sp.
SN2]
Length = 209
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 111/177 (62%), Positives = 136/177 (76%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + +I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKENVIFLVGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDVSTVCVG AASMGAFLLS G KGKRY LPNSR+MIHQPLGG QG SD
Sbjct: 85 AIYDTMNFIKPDVSTVCVGQAASMGAFLLSGGAKGKRYCLPNSRVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
++ A E+L K LN ++ HTGQ EK+ DTDRD F+SA EAK+YGLID V+ N
Sbjct: 145 FEIHAKEILSIKEKLNRLMAQHTGQDYEKVAHDTDRDNFLSATEAKEYGLIDQVMTN 201
>gi|357040211|ref|ZP_09102000.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
gibsoniae DSM 7213]
gi|355356875|gb|EHG04656.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
gibsoniae DSM 7213]
Length = 197
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 142/177 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ GGP++D ++N+++AQLL+L+A DP KDI +Y+NSPGG VTAGM
Sbjct: 17 RSYDIYSRLLKDRIVFIGGPIDDTVSNLVIAQLLFLEAEDPEKDINIYINSPGGVVTAGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++++PDVST+C+G AASMG+FLL+AG GKR++LP +RIMIHQPLGG QG +D
Sbjct: 77 AIYDTMQYVKPDVSTICLGQAASMGSFLLAAGAPGKRFALPYARIMIHQPLGGVQGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
ID+ A E+L K LN L+ HTGQ +K+ DT+RDFFMSAEEAK+YGLID V +
Sbjct: 137 IDIHAKEILRMKDTLNDLLAKHTGQPRDKVARDTERDFFMSAEEAKEYGLIDKVFVR 193
>gi|425066829|ref|ZP_18469949.1| ATP-dependentlp protease proteolytic subunit [Pasteurella multocida
subsp. gallicida P1059]
gi|404380615|gb|EJZ77105.1| ATP-dependentlp protease proteolytic subunit [Pasteurella multocida
subsp. gallicida P1059]
Length = 188
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GG VED MAN+IVAQLL+L++ DP KDI +Y+NSPGGSVTAGM
Sbjct: 11 RSYDIYSRLLKERVIFLGGEVEDRMANLIVAQLLFLESEDPEKDINIYINSPGGSVTAGM 70
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ ++PD+ T+CVG A SMGAFLL+ GT GKR +LP++R+MIHQPLGG +G SD
Sbjct: 71 AIYDTMQFVKPDIRTLCVGQACSMGAFLLAGGTAGKRIALPSARVMIHQPLGGFRGQASD 130
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L++HTGQT+E+I DTDRD FMSAEEAK YGL+D V+
Sbjct: 131 IQIHAQEILKIKQTLNERLAFHTGQTIERIERDTDRDNFMSAEEAKAYGLVDEVL 185
>gi|357007886|ref|ZP_09072885.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus elgii
B69]
Length = 194
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L Q RI+ GPV D+ AN I+AQLL+LDA DP+K+I +Y+NSPGGS+ AG+
Sbjct: 16 RAYDIYSRLLQDRIVFLTGPVTDEAANAIIAQLLFLDAADPDKEIKLYINSPGGSIAAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+D IRH++P+VST+C+GLAASMGAFLLS GTKGKRY+LPNS +MIHQPLGGAQG SD
Sbjct: 76 AIYDAIRHVKPNVSTLCIGLAASMGAFLLSGGTKGKRYALPNSEVMIHQPLGGAQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
+++ A +L + LNG L+ HTGQ L+ + DTDRD+FM+A++A YG+ID ++
Sbjct: 136 VEIGARRILKLRDKLNGLLAAHTGQPLDTVERDTDRDYFMNAQDALAYGIIDEIL 190
>gi|388566136|ref|ZP_10152607.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenophaga sp. PBC]
gi|388266642|gb|EIK92161.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenophaga sp. PBC]
Length = 205
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 147/192 (76%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
QG G PM++ R ++ S+L + R++ GPV D AN+IVAQLL+L++ +P+K
Sbjct: 7 QGLGMVPMVIEQSGRGERAYDIYSRLLKERVVFLVGPVNDQSANLIVAQLLFLESENPDK 66
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI Y+NSPGGSV+AGMAIFDT+ I+PDVST+CVG+AASMGAFLL+AGTKGKR+SLPNS
Sbjct: 67 DISFYINSPGGSVSAGMAIFDTMNFIKPDVSTLCVGMAASMGAFLLAAGTKGKRFSLPNS 126
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
++MIHQPLGG QG ++I++ A E+L + LN L+ TGQ LEKI DT+RD+++SA
Sbjct: 127 KVMIHQPLGGTQGQATEIEIHAREILKTREQLNKILAERTGQPLEKIERDTERDYYLSAA 186
Query: 274 EAKDYGLIDGVV 285
E+ +YGLID V+
Sbjct: 187 ESAEYGLIDKVI 198
>gi|404417286|ref|ZP_10999088.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
arlettae CVD059]
gi|403490299|gb|EJY95842.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
arlettae CVD059]
Length = 194
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 143/179 (79%), Gaps = 1/179 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLLSAG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLSAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPH 289
I++ AN +L +A LN L+ TGQ++EKI +DTDRD F+SA+EAK+YGLID VM P
Sbjct: 136 IEIAANHILKTRAKLNKILAERTGQSIEKIEKDTDRDNFLSADEAKEYGLIDH-VMEPE 193
>gi|261494048|ref|ZP_05990551.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496191|ref|ZP_05992597.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261308143|gb|EEY09440.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261310214|gb|EEY11414.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 197
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 108/181 (59%), Positives = 143/181 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED+MAN+IVAQLL+L+A DP KDI +Y+NSPGG VTAG+
Sbjct: 16 RSYDIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPGGVVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDV+T+C G AASMGAFLLSAG KGKR++LP++RIMIHQPLGGA+G +D
Sbjct: 76 AIYDTMNFIKPDVATLCTGQAASMGAFLLSAGAKGKRFALPHARIMIHQPLGGARGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I +QA E+L KA L ++ H+GQ+ EK+ DT+RD FMSAEEA +YGLID V+ + +
Sbjct: 136 IQIQAEEILRLKATLTHRMAEHSGQSYEKVLADTERDNFMSAEEAAEYGLIDKVLTSRSE 195
Query: 291 I 291
+
Sbjct: 196 V 196
>gi|270263570|ref|ZP_06191839.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
odorifera 4Rx13]
gi|333925889|ref|YP_004499468.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. AS12]
gi|333930842|ref|YP_004504420.1| ATP-dependent Clp protease proteolytic subunit [Serratia plymuthica
AS9]
gi|386327713|ref|YP_006023883.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. AS13]
gi|421781988|ref|ZP_16218448.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
plymuthica A30]
gi|270042454|gb|EFA15549.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
odorifera 4Rx13]
gi|333472449|gb|AEF44159.1| ATP-dependent Clp protease proteolytic subunit [Serratia plymuthica
AS9]
gi|333489949|gb|AEF49111.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. AS12]
gi|333960046|gb|AEG26819.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. AS13]
gi|407755862|gb|EKF65985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
plymuthica A30]
Length = 207
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAESPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMG+FLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMKFIKPDVSTICMGQACSMGSFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ HTGQTLE+I DT+RD FM+AEEA +YGL+DG++
Sbjct: 149 IEIHAREILKVKARMNELMAEHTGQTLEQIERDTERDRFMTAEEAVEYGLVDGIL 203
>gi|94958239|gb|ABF47251.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
xylosus]
Length = 194
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 143/176 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVM 286
I++ AN +L +A LN L+ TGQ++EKI +DTDRD F+SAEEAK+YGL+D V++
Sbjct: 136 IEIAANHILKTRAKLNQILAERTGQSIEKIEKDTDRDNFLSAEEAKEYGLVDQVMV 191
>gi|427714618|ref|YP_007063242.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. PCC 6312]
gi|427378747|gb|AFY62699.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. PCC 6312]
Length = 241
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 113/181 (62%), Positives = 141/181 (77%), Gaps = 6/181 (3%)
Query: 111 RFQNVLSQLFQHRII------RCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGG 164
R ++ S+L + RII G ++D +A+ IVAQLL+LDA DP +DI +Y+NSPGG
Sbjct: 47 RAFDIYSRLLRERIIFLGGSGGQGRGIDDTVADSIVAQLLFLDAEDPERDIYLYINSPGG 106
Query: 165 SVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGA 224
SVTAGMAI+DT++H+RPDV T+C GLAASMGAFLLS GT GKR +LP+SRIMIHQPLGGA
Sbjct: 107 SVTAGMAIYDTMKHVRPDVCTLCFGLAASMGAFLLSGGTPGKRMALPHSRIMIHQPLGGA 166
Query: 225 QGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
QG DI++QA E+L+HK LN L+ HT Q +E+I DT+RDFFMSAEEA+ YGLID V
Sbjct: 167 QGQAVDIEIQAREILYHKKKLNELLASHTSQPIERIEADTERDFFMSAEEAQAYGLIDQV 226
Query: 285 V 285
V
Sbjct: 227 V 227
>gi|392971446|ref|ZP_10336842.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
equorum subsp. equorum Mu2]
gi|403047222|ref|ZP_10902690.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus sp.
OJ82]
gi|392510838|emb|CCI60118.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
equorum subsp. equorum Mu2]
gi|402762756|gb|EJX16850.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus sp.
OJ82]
Length = 194
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 143/176 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVM 286
I++ AN +L +A LN L+ TGQ++EKI +DTDRD F+SAEEAK+YGL+D V++
Sbjct: 136 IEIAANHILKTRAKLNQILAERTGQSIEKIEKDTDRDNFLSAEEAKEYGLVDQVMV 191
>gi|428201398|ref|YP_007079987.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
gi|427978830|gb|AFY76430.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
Length = 272
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 138/175 (78%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G P++D +A+ IVAQLLYLDA DP KDI +Y+NSPGGSV AG AI+
Sbjct: 85 DIYSRLLRERIVFLGTPIDDKVADSIVAQLLYLDAEDPEKDIQLYINSPGGSVYAGFAIY 144
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
D ++ +RPDV T+C GLAASMGAFLLS G KGKR +LP++R+MIHQP+GGAQG +I++
Sbjct: 145 DAMQQVRPDVVTICFGLAASMGAFLLSGGAKGKRMALPSARLMIHQPIGGAQGQAVEIEI 204
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
QA E+L+ K LN L+ HTGQ EKI DT+RDF+MSA+EA++YGLID V+ P
Sbjct: 205 QAREILYMKQRLNELLAIHTGQPYEKIATDTERDFYMSAQEAQEYGLIDRVISRP 259
>gi|429743956|ref|ZP_19277482.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria sp. oral taxon 020 str. F0370]
gi|429164090|gb|EKY06250.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Neisseria sp. oral taxon 020 str. F0370]
Length = 211
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 115/203 (56%), Positives = 152/203 (74%), Gaps = 9/203 (4%)
Query: 85 EVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
E+ ++ IPT + + G G R ++ S+L + RII GPV DD AN++VAQ+L
Sbjct: 4 EIGNNTLIPTVIE-QSGRGE------RAFDIYSRLLKERIIFLVGPVNDDTANLVVAQML 56
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L++ +P+KDI +Y+NSPGGSVTAGM++FDT+ I+PDVST+C+G AASMGAFLLSAG K
Sbjct: 57 FLESENPDKDIFLYINSPGGSVTAGMSVFDTMNFIKPDVSTLCLGQAASMGAFLLSAGAK 116
Query: 205 GKRYSLPNSRIMIHQPL--GGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINE 262
GKR++LPNSRIMIHQPL GG G SDI++ A E++ K LN +L+ HTGQ LEKI
Sbjct: 117 GKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELIKIKQKLNEFLAKHTGQPLEKIER 176
Query: 263 DTDRDFFMSAEEAKDYGLIDGVV 285
DTDRD FMSA+ A++YGLID V+
Sbjct: 177 DTDRDNFMSADAAQEYGLIDQVI 199
>gi|389578265|ref|ZP_10168292.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacter
postgatei 2ac9]
gi|389399900|gb|EIM62122.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacter
postgatei 2ac9]
Length = 208
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN+IVAQ+L+L++ DP+KDI Y+NSPGG VTAGM
Sbjct: 16 RAYDIYSRLLKDRIIFLGSAIDDEVANLIVAQMLFLESEDPDKDINFYINSPGGVVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI++I+PDV+TVC+G AASMGA LL+AGT GKR++LPN+RIMIHQP+GGAQG +D
Sbjct: 76 AIYDTIQYIKPDVATVCIGQAASMGALLLTAGTAGKRFALPNARIMIHQPMGGAQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I +QA E+L K LN LS HTGQ +E++ DT+RDFFMS ++A +YG++D VV
Sbjct: 136 IKIQATEILRMKDVLNEILSKHTGQNIERVAADTERDFFMSGQQALEYGIVDRVV 190
>gi|18203597|sp|Q9X5N0.1|CLPP2_MYXXA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|4838463|gb|AAD31002.1|AF127082_1 ATP-dependent protease proteolytic subunit ClpP [Myxococcus xanthus
DZF1]
Length = 206
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 147/182 (80%), Gaps = 1/182 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R +++S+L + RI+ G ++DD+AN+IVAQLL+L++ DP+KDI +Y+NSPGGSVTAG+
Sbjct: 18 RSYDIISRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPGGSVTAGL 77
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++++ VST+CVG AASMGA LL AG KGKRY+LP+SRIMIHQPLGG +G +D
Sbjct: 78 AIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQPLGGVRGQATD 137
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L KA LN + HTGQ++E++ +DTDRD+FM A EAK YG+ID + NP K
Sbjct: 138 IEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMGASEAKAYGIIDE-IQNPRK 196
Query: 291 IL 292
++
Sbjct: 197 VV 198
>gi|402814642|ref|ZP_10864236.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
alvei DSM 29]
gi|402508489|gb|EJW19010.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
alvei DSM 29]
Length = 193
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D +AN I+AQLL+L A DP KDI +Y+NSPGGS++AGM
Sbjct: 16 RSYDIYSRLLKDRIIFLGTEVNDLVANSIIAQLLFLAADDPEKDIHLYINSPGGSISAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++HI+PDVST+CVG+AASMGAFLL+AG KGKR++LPNS IMIHQPLGGAQG +D
Sbjct: 76 AIYDTMQHIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGAQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I+++A +L + NLN L+ TGQ LE++ DTDRD+FMSA+EA DYGL+D V+
Sbjct: 136 IEIRARRILKMRDNLNKILAERTGQPLERVERDTDRDYFMSAQEAFDYGLVDKVL 190
>gi|15603841|ref|NP_246915.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Pm70]
gi|378774981|ref|YP_005177224.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida 36950]
gi|383310944|ref|YP_005363754.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. HN06]
gi|386834993|ref|YP_006240310.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pasteurella
multocida subsp. multocida str. 3480]
gi|417854851|ref|ZP_12500118.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_goat]
gi|421255199|ref|ZP_15709765.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_buffalo]
gi|421262286|ref|ZP_15713573.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_cattle]
gi|421264724|ref|ZP_15715690.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. P52VAC]
gi|425064713|ref|ZP_18467838.1| ATP-dependentlp protease proteolytic subunit [Pasteurella multocida
subsp. gallicida X73]
gi|18202809|sp|Q9CJM2.1|CLPP_PASMU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|12722415|gb|AAK04060.1| ClpP [Pasteurella multocida subsp. multocida str. Pm70]
gi|338217272|gb|EGP03161.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_goat]
gi|356597529|gb|AET16255.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida 36950]
gi|380872216|gb|AFF24583.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. HN06]
gi|385201696|gb|AFI46551.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pasteurella
multocida subsp. multocida str. 3480]
gi|401687836|gb|EJS83533.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. P52VAC]
gi|401689639|gb|EJS85037.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_cattle]
gi|401690987|gb|EJS86083.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_buffalo]
gi|404380899|gb|EJZ77388.1| ATP-dependentlp protease proteolytic subunit [Pasteurella multocida
subsp. gallicida X73]
Length = 193
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GG VED MAN+IVAQLL+L++ DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKERVIFLGGEVEDRMANLIVAQLLFLESEDPEKDINIYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ ++PD+ T+CVG A SMGAFLL+ GT GKR +LP++R+MIHQPLGG +G SD
Sbjct: 76 AIYDTMQFVKPDIRTLCVGQACSMGAFLLAGGTAGKRIALPSARVMIHQPLGGFRGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L++HTGQT+E+I DTDRD FMSAEEAK YGL+D V+
Sbjct: 136 IQIHAQEILKIKQTLNERLAFHTGQTIERIERDTDRDNFMSAEEAKAYGLVDEVL 190
>gi|254428693|ref|ZP_05042400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alcanivorax
sp. DG881]
gi|196194862|gb|EDX89821.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alcanivorax
sp. DG881]
Length = 244
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 143/172 (83%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L++ +P+KDI +Y+NSPGGSVTAGM+I+
Sbjct: 68 DIYSRLLKERVIFMIGQVEDHMANLIVAQMLFLESENPDKDIHLYINSPGGSVTAGMSIY 127
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+CVG AASMGAFLL+AG GKR++LPN+R+MIHQPLGG QG SDI++
Sbjct: 128 DTMQFIKPDVSTMCVGQAASMGAFLLTAGATGKRFALPNARVMIHQPLGGFQGQASDIEI 187
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K LN L++HTGQ +E++ +DTDRD FMSA+EAK+YG+ID V+
Sbjct: 188 HAKEILKIKGQLNSLLAHHTGQPIEQLEKDTDRDNFMSADEAKEYGIIDAVL 239
>gi|161524522|ref|YP_001579534.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
multivorans ATCC 17616]
gi|189350722|ref|YP_001946350.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
multivorans ATCC 17616]
gi|221198217|ref|ZP_03571263.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD2M]
gi|221209201|ref|ZP_03582193.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD2]
gi|254252156|ref|ZP_04945474.1| Peptidase S14 [Burkholderia dolosa AUO158]
gi|416986795|ref|ZP_11938505.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp.
TJI49]
gi|124894765|gb|EAY68645.1| Peptidase S14 [Burkholderia dolosa AUO158]
gi|160341951|gb|ABX15037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans ATCC 17616]
gi|189334744|dbj|BAG43814.1| ATP-dependent Clp protease [Burkholderia multivorans ATCC 17616]
gi|221170939|gb|EEE03394.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD2]
gi|221182149|gb|EEE14550.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD2M]
gi|325518991|gb|EGC98514.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp.
TJI49]
Length = 217
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 145/177 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R++ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 39 RSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 98
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR++LPNSR+MIHQPLGGA+G SD
Sbjct: 99 AIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASD 158
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++QA E+L+ K LN L+ HTGQ +E+I DTDRD FMS+E+AK YGLID V++
Sbjct: 159 IEIQAREILYLKERLNHLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVLLK 215
>gi|318043033|ref|ZP_07974989.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CB0101]
Length = 194
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 140/177 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D +A+ +VAQLL+L+A DP KDI +Y+NSPGGSVTAG+
Sbjct: 14 RAFDIYSRLLRERIIFLGTGIDDQVADALVAQLLFLEAEDPEKDIQIYVNSPGGSVTAGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ + PDV T+C GLAASMGAFLLS GTKGKR +LPN+RIMIHQPLGGAQG D
Sbjct: 74 AIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++QA E+L+ K LNG ++ HTGQ LEKI EDTDRD+F+S EA YGLID VV +
Sbjct: 134 IEIQAKEILYLKDTLNGLMAEHTGQPLEKIAEDTDRDYFLSPAEAVQYGLIDRVVTD 190
>gi|427714259|ref|YP_007062883.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
6312]
gi|427378388|gb|AFY62340.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
6312]
Length = 198
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 107/172 (62%), Positives = 142/172 (82%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ ++L++ RII G V+D++AN IVA +LYLD+ DP KDI++Y+NSPGGSVTAGMAI+
Sbjct: 22 DIYNRLYRERIIFLGRDVDDEIANQIVAVMLYLDSEDPGKDIMLYINSPGGSVTAGMAIY 81
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HI+ DV T+CVGLAASMG+FLL+AGTKGKR +LP+SRIMIHQP GG +G +DI++
Sbjct: 82 DTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRGQATDIEI 141
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
+A E+L + LN +HTGQ LEKI +D DRD+FMSA+EAKDYGLID V+
Sbjct: 142 EAREILRIRRQLNNLYVHHTGQVLEKIEKDMDRDYFMSAQEAKDYGLIDRVI 193
>gi|417852109|ref|ZP_12497751.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. gallicida str. Anand1_poultry]
gi|338217778|gb|EGP03617.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. gallicida str. Anand1_poultry]
Length = 193
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GG VED MAN+IVAQLL+L++ DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKERVIFLGGEVEDRMANLIVAQLLFLESEDPEKDINIYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ ++PD+ T+CVG A SMGAFLL+ GT GKR +LP++R+MIHQPLGG +G SD
Sbjct: 76 AIYDTMQFVKPDIRTLCVGQACSMGAFLLAGGTAGKRIALPSARVMIHQPLGGFRGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L++HTGQT+E+I DTDRD FMSAEEAK YGL+D V+
Sbjct: 136 IQIHAQEILKIKQTLNERLAFHTGQTIERIESDTDRDNFMSAEEAKAYGLVDEVL 190
>gi|317050717|ref|YP_004111833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurispirillum indicum S5]
gi|316945801|gb|ADU65277.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurispirillum indicum S5]
Length = 196
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G ++D ++N+I+AQLL+L+A DP KDI +Y+NSPGG VTAGM
Sbjct: 16 RSYDIYSRLLKDRIVFLGTQIDDQISNVIIAQLLFLEAEDPEKDIFLYINSPGGVVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++IRP VST+CVG AASMGA LL+AG KGKR++LP+SRIMIHQPLGGAQG +D
Sbjct: 76 AIYDTMQYIRPKVSTICVGQAASMGAVLLAAGEKGKRFALPHSRIMIHQPLGGAQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L K LN L HTG LEKI DTDRDFFM+ E+A+ YG+ID V+
Sbjct: 136 IEIQAREILRIKEMLNDILVRHTGADLEKIQRDTDRDFFMTGEQARAYGIIDEVI 190
>gi|257138854|ref|ZP_05587116.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis E264]
gi|424903788|ref|ZP_18327301.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis MSMB43]
gi|390931661|gb|EIP89062.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis MSMB43]
Length = 217
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 106/174 (60%), Positives = 144/174 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 39 RSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 98
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ ++PDVST+C+GLAASMGAFLL++G KGKRY+LPN+R+MIHQPLGGA+G SD
Sbjct: 99 AIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASD 158
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++QA E+L+ K LN L++HTGQ +E+I DTDRD FMS+E+AK YGLID V
Sbjct: 159 IEIQAREILYLKDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 212
>gi|237807855|ref|YP_002892295.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Tolumonas
auensis DSM 9187]
gi|237500116|gb|ACQ92709.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Tolumonas
auensis DSM 9187]
Length = 207
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDQMANLIVAQLLFLESENPDKDIYIYINSPGGSVTAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVSTVC+G A SMGAFLLSAGTKGKR+ LP++R+MIHQPLGG QG SD
Sbjct: 89 AIYDTLKFIKPDVSTVCMGQACSMGAFLLSAGTKGKRFCLPSARVMIHQPLGGFQGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ HTGQ LE+I DTDRD FMSA++A +YGL+D ++
Sbjct: 149 IQIHAMEILKIKERLNNLLAEHTGQPLERIERDTDRDNFMSADQAVEYGLVDAIL 203
>gi|78485521|ref|YP_391446.1| ATP-dependent Clp protease proteolytic subunit [Thiomicrospira
crunogena XCL-2]
gi|110816468|sp|Q31GF1.1|CLPP_THICR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78363807|gb|ABB41772.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thiomicrospira
crunogena XCL-2]
Length = 200
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 140/172 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQLL+L++ +P+KDI +Y+NSPGGSVTAGMAI+
Sbjct: 26 DIYSRLLKERVIFLVGQVEDHMANLIVAQLLFLESENPDKDIHLYINSPGGSVTAGMAIY 85
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+R I+PDVST+C+G AASMG+FLLSAG +GKRY+LPNSR+MIHQPLGG QG SDI++
Sbjct: 86 DTMRFIKPDVSTMCIGQAASMGSFLLSAGAEGKRYALPNSRVMIHQPLGGFQGQASDIEI 145
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E++ K LN L+ HTGQ +E I DTDRD FMSA+EA DYGL+D V+
Sbjct: 146 HAKEIIQIKQKLNKALADHTGQPIEVIENDTDRDNFMSADEACDYGLVDKVL 197
>gi|392954369|ref|ZP_10319921.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrocarboniphaga effusa AP103]
gi|391858268|gb|EIT68798.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrocarboniphaga effusa AP103]
Length = 193
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 146/175 (83%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GP++D MANI+VAQ+L+L++ +P+KDI +Y+NSPGG +TAG+
Sbjct: 11 RAYDIYSRLLKERIIFIVGPIDDYMANIVVAQMLFLESENPDKDIHLYINSPGGIITAGL 70
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDV+T+C+G AASMGAFLLSAGTKGKRYSLP+SRIMIHQP GGAQG +D
Sbjct: 71 SIYDTMKFIKPDVATMCIGQAASMGAFLLSAGTKGKRYSLPHSRIMIHQPSGGAQGTAAD 130
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
+++QA E+L+ + LN ++ HTGQ +E+I +D +RD+FMSAE A+DYG+ID ++
Sbjct: 131 VEIQAKEILYLRERLNKLMADHTGQPIERIAKDVERDYFMSAEAARDYGMIDRIL 185
>gi|221215056|ref|ZP_03588023.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD1]
gi|421469009|ref|ZP_15917506.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia multivorans ATCC BAA-247]
gi|421479611|ref|ZP_15927294.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia multivorans CF2]
gi|221164992|gb|EED97471.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD1]
gi|400222687|gb|EJO53050.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia multivorans CF2]
gi|400230734|gb|EJO60485.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Burkholderia multivorans ATCC BAA-247]
Length = 208
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 145/177 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R++ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 30 RSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 89
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR++LPNSR+MIHQPLGGA+G SD
Sbjct: 90 AIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASD 149
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++QA E+L+ K LN L+ HTGQ +E+I DTDRD FMS+E+AK YGLID V++
Sbjct: 150 IEIQAREILYLKERLNHLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVLLK 206
>gi|116074350|ref|ZP_01471612.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9916]
gi|116069655|gb|EAU75407.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9916]
Length = 229
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 122/228 (53%), Positives = 160/228 (70%), Gaps = 12/228 (5%)
Query: 63 DYSSLDDCESTWKGIWSIRNDLEVPSSP--YIPTYAQGEQGGGPPPMLLGRFQNVLSQLF 120
D SS ++ W GI R +PS+ +PT + + G G R ++ S+L
Sbjct: 3 DASSSHPIQNRWTGI---RPTAVMPSAAPGVLPTVVE-QSGRGE------RAFDIYSRLL 52
Query: 121 QHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIR 180
+ RII G ++D +A+ +VAQLL+L+A DP KDI +Y+NSPGGSVTAG+AI+DT++ +
Sbjct: 53 RERIIFLGTGIDDQVADALVAQLLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVA 112
Query: 181 PDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLH 240
PDV T+C GLAASMGAFLLS GTKGKR +LPN+RIMIHQP+GGAQG DI++QA E+L+
Sbjct: 113 PDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPMGGAQGQAVDIEIQAQEILY 172
Query: 241 HKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
K LNG ++ HTGQ LE I EDTDRD F+S EA +YGLID VV +P
Sbjct: 173 LKETLNGLMAEHTGQPLETIAEDTDRDHFLSPAEAVEYGLIDRVVDSP 220
>gi|351729533|ref|ZP_08947224.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
radicis N35]
Length = 202
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 108/192 (56%), Positives = 149/192 (77%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
QG G PM++ GR + ++ S+L + R+I GPV D AN++VAQLL+L++ +P+K
Sbjct: 7 QGLGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDQTANLVVAQLLFLESENPDK 66
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI Y+NSPGGSV+AGMAIFDT+ I+PDVST+C G+AASMGAFLL+AG KGKR++LPNS
Sbjct: 67 DISFYINSPGGSVSAGMAIFDTMNFIKPDVSTLCTGMAASMGAFLLAAGAKGKRFALPNS 126
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
++MIHQPLGG QG ++I++ A E+L + LN L+ TGQ LEKI DT+RD+F+SA+
Sbjct: 127 KVMIHQPLGGMQGQATEIEIHAREILKTREQLNKILAERTGQPLEKIQRDTERDYFLSAD 186
Query: 274 EAKDYGLIDGVV 285
E+K+YGL+D V+
Sbjct: 187 ESKEYGLVDQVI 198
>gi|258511812|ref|YP_003185246.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|384135662|ref|YP_005518376.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|257478538|gb|ACV58857.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|339289747|gb|AEJ43857.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
Length = 198
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 113/181 (62%), Positives = 138/181 (76%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G P++D +AN IVAQLL+L A DP KDI MY+NSPGGSVTAGM
Sbjct: 17 RTYDIYSRLLKDRIVILGTPIDDQVANSIVAQLLFLAADDPEKDIQMYINSPGGSVTAGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++HIRP VST+C+G+AASMGAFLL+AG KGKRY+LPN+ IMIHQPLGG +G SD
Sbjct: 77 AIYDTMQHIRPAVSTLCIGMAASMGAFLLAAGEKGKRYALPNAEIMIHQPLGGVEGQASD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I + A +L K LN LS TGQ LE I DTDRD FM+AEEAK YGLID V+ H
Sbjct: 137 IKIHAEWILKTKDKLNRLLSERTGQPLEVIERDTDRDHFMTAEEAKAYGLIDEVLHPLHP 196
Query: 291 I 291
+
Sbjct: 197 V 197
>gi|425445342|ref|ZP_18825374.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9443]
gi|425453823|ref|ZP_18833576.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9807]
gi|389734665|emb|CCI01691.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9443]
gi|389800128|emb|CCI20438.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9807]
Length = 233
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 139/179 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G PV+D +A+ IVAQLLYL+A DP KDI +Y+NSPGGSV AG+
Sbjct: 44 RAFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQLYINSPGGSVYAGL 103
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ IRP V+T+C GLAASMGAFLL G GKR SLP+SRIMIHQPLGGAQG SD
Sbjct: 104 AIYDTMQQIRPHVATICFGLAASMGAFLLCGGAAGKRMSLPSSRIMIHQPLGGAQGQASD 163
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPH 289
I +QA E+L+ K LN L++HTGQ ++I DT+RDFFMSA EAK+YGLID V+ P
Sbjct: 164 IAIQAKEILYIKQRLNTMLAHHTGQPYDRIANDTERDFFMSAVEAKEYGLIDQVISRPE 222
>gi|293392545|ref|ZP_06636865.1| ATP-dependent Clp protease proteolytic subunit [Serratia odorifera
DSM 4582]
gi|291424947|gb|EFE98156.1| ATP-dependent Clp protease proteolytic subunit [Serratia odorifera
DSM 4582]
Length = 207
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAESPEKDIFLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMG+FLL+AGTKGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQACSMGSFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ HTGQ+LE+I+ DT+RD FM+AEE+ +YGL+DG++
Sbjct: 149 IEIHAREILKVKARMNELMAQHTGQSLEQIDRDTERDRFMTAEESVEYGLVDGIL 203
>gi|345428918|ref|YP_004822034.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Haemophilus parainfluenzae T3T1]
gi|301154977|emb|CBW14440.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Haemophilus parainfluenzae T3T1]
Length = 188
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 140/177 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L++ DP KDI +Y+NSPGGSVTAGM
Sbjct: 11 RSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPKKDINIYINSPGGSVTAGM 70
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDV T+C+G A SMGAFLL+ GT GKR +LPN+R+MIHQPLGG +G SD
Sbjct: 71 AIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGTAGKRAALPNARVMIHQPLGGFRGQASD 130
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I + A E+L K LN L++HTGQ++E+I +DTDRD FMSAEEAK YGL+D V++
Sbjct: 131 IQIHAQEILKIKQTLNERLAFHTGQSIERIEKDTDRDNFMSAEEAKAYGLVDDVLIK 187
>gi|218290814|ref|ZP_03494883.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius LAA1]
gi|218239172|gb|EED06373.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius LAA1]
Length = 198
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 113/181 (62%), Positives = 138/181 (76%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G P++D +AN IVAQLL+L A DP KDI MY+NSPGGSVTAGM
Sbjct: 17 RTYDIYSRLLKDRIVILGTPIDDQVANSIVAQLLFLAADDPEKDIQMYINSPGGSVTAGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++HIRP VST+C+G+AASMGAFLL+AG KGKRY+LPN+ IMIHQPLGG +G SD
Sbjct: 77 AIYDTMQHIRPAVSTLCIGMAASMGAFLLAAGEKGKRYALPNAEIMIHQPLGGVEGQASD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I + A +L K LN LS TGQ LE I DTDRD FM+AEEAK YGLID V+ H
Sbjct: 137 IKIHAEWILKTKDKLNRLLSERTGQPLEVIERDTDRDHFMTAEEAKAYGLIDEVLHPMHP 196
Query: 291 I 291
+
Sbjct: 197 V 197
>gi|56460113|ref|YP_155394.1| ATP-dependent Clp protease proteolytic subunit [Idiomarina
loihiensis L2TR]
gi|67460202|sp|Q5QXN8.1|CLPP_IDILO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56179123|gb|AAV81845.1| Protease subunit of ATP-dependent Clp protease [Idiomarina
loihiensis L2TR]
Length = 206
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 111/204 (54%), Positives = 149/204 (73%), Gaps = 7/204 (3%)
Query: 82 NDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVA 141
+D++ P + +P + G R ++ S+L + R+I C G VED MAN+IVA
Sbjct: 3 SDIQDPMAQLVPMVVEQTSKGE-------RSYDIYSRLLKERVIFCCGQVEDHMANLIVA 55
Query: 142 QLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSA 201
QLL+L++ +P+KDI +Y+NSPGG VTAGMAI+DT+R I+PDVSTVC+G AASMGAFLL+
Sbjct: 56 QLLFLESDNPDKDIYLYINSPGGVVTAGMAIYDTMRFIKPDVSTVCMGQAASMGAFLLAG 115
Query: 202 GTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKIN 261
G +GKRY LPNSR+MIHQPLGG QG SD ++ A ++L K LN L+ +TGQ EK+
Sbjct: 116 GAQGKRYCLPNSRVMIHQPLGGFQGQASDFEIHAKQILDLKERLNRMLAENTGQDYEKVA 175
Query: 262 EDTDRDFFMSAEEAKDYGLIDGVV 285
DTDRD F+SAEE+ DYGL+DG++
Sbjct: 176 RDTDRDHFLSAEESIDYGLVDGIL 199
>gi|406893554|gb|EKD38590.1| hypothetical protein ACD_75C00684G0001 [uncultured bacterium]
Length = 176
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 139/174 (79%)
Query: 120 FQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHI 179
+ RI+ G V DD+AN+IVAQLL+L+A DP+KDI Y+NSPGGSVTAGMAI+DT++++
Sbjct: 1 MKERIVFLGSGVNDDVANVIVAQLLFLEAEDPDKDITFYINSPGGSVTAGMAIYDTMQYV 60
Query: 180 RPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEML 239
+ D++T+C+G AASMGAFLL+AGT GKRYSLPN+RIMIHQP GG QG +DID+QA E+L
Sbjct: 61 KSDIATLCIGQAASMGAFLLAAGTDGKRYSLPNARIMIHQPAGGFQGQATDIDIQAKEIL 120
Query: 240 HHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQ 293
K +LN L++HT +LEKI+ DT+RDFFM EAK YG+ID V+ N ++ +
Sbjct: 121 RMKKDLNYLLAHHTKNSLEKISADTERDFFMGPSEAKSYGIIDKVLTNREELAE 174
>gi|398805269|ref|ZP_10564248.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Polaromonas
sp. CF318]
gi|398092050|gb|EJL82472.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Polaromonas
sp. CF318]
Length = 218
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPV D AN++VAQLL+L++ +P+KDI Y+NSPGGSVTAGM
Sbjct: 40 RSYDIYSRLLKERVIFLVGPVNDQTANLVVAQLLFLESENPDKDISFYINSPGGSVTAGM 99
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+CVG+AASMGAFLLSAG KGKR+SLPNSR+MIHQP GGAQG +D
Sbjct: 100 AIYDTMQFIKPDVSTLCVGMAASMGAFLLSAGAKGKRFSLPNSRVMIHQPSGGAQGQATD 159
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A ++L + LN L+ +TGQ +EKI DT+RD+FM AE+AK+YGL+D V+
Sbjct: 160 IEIHARDILKTRDQLNRILAANTGQPIEKIERDTERDYFMFAEDAKEYGLVDQVI 214
>gi|257460311|ref|ZP_05625414.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
gracilis RM3268]
gi|257442376|gb|EEV17516.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
gracilis RM3268]
Length = 194
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 142/180 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G ++D +A+ IVAQLL+L+A DP+KDI +Y+NSPGG VT+G
Sbjct: 15 RSYDIYSRLLKDRIVMLSGEIDDAVASSIVAQLLFLEAEDPDKDIYLYINSPGGVVTSGF 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ +I+PDVST+C+G AASMGAFLLS G KGKRY+LPNSRIMIHQPLGGAQG +D
Sbjct: 75 SIYDTMNYIKPDVSTICIGQAASMGAFLLSCGAKGKRYALPNSRIMIHQPLGGAQGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L K LNG LS ++G+ L ++ +DTDRDFFMSAE+A YGLID V+ K
Sbjct: 135 IEIQAKEILRMKEILNGILSQNSGKDLAQVEKDTDRDFFMSAEDAVQYGLIDQVLQKSFK 194
>gi|359453081|ref|ZP_09242406.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20495]
gi|414070583|ref|ZP_11406566.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
Bsw20308]
gi|358049849|dbj|GAA78655.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20495]
gi|410807037|gb|EKS13020.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
Bsw20308]
Length = 205
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 141/180 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED+MAN+I+AQ+L+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKERIIFLTGQVEDNMANLILAQMLFLESENPDKDIFLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDVST+CVG AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 85 AIYDTMNFIKPDVSTICVGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
++ A E+L K LN ++ HTGQ L+ I++DTDRD FMSA +A DYGL+D V N K
Sbjct: 145 FEIHAKEILSIKDKLNRLMAEHTGQPLDVISKDTDRDNFMSASQAVDYGLVDSVFTNRDK 204
>gi|83718816|ref|YP_442643.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis E264]
gi|167581577|ref|ZP_02374451.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis TXDOH]
gi|167619693|ref|ZP_02388324.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis Bt4]
gi|167836265|ref|ZP_02463148.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis MSMB43]
gi|110816456|sp|Q2SWQ6.1|CLPP_BURTA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|83652641|gb|ABC36704.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
thailandensis E264]
Length = 207
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 106/174 (60%), Positives = 144/174 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 29 RSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ ++PDVST+C+GLAASMGAFLL++G KGKRY+LPN+R+MIHQPLGGA+G SD
Sbjct: 89 AIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++QA E+L+ K LN L++HTGQ +E+I DTDRD FMS+E+AK YGLID V
Sbjct: 149 IEIQAREILYLKDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 202
>gi|421858505|ref|ZP_16290772.1| Clp protease [Paenibacillus popilliae ATCC 14706]
gi|410831950|dbj|GAC41209.1| Clp protease [Paenibacillus popilliae ATCC 14706]
Length = 192
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D +AN I+AQ+L+L A DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RSYDIYSRLLKDRIIFLGSQVNDMVANSIIAQMLFLQADDPDKDIHLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++HI+PDVST+CVG+AASMGAFLL+AG+KGKR++LPNS IMIHQPLGGA+G SD
Sbjct: 76 AIYDTMQHIKPDVSTICVGMAASMGAFLLNAGSKGKRFALPNSEIMIHQPLGGAEGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I+++A +L + LN L+ TGQ LE+I DTDRD+FMSAEEA +YGL+D V+
Sbjct: 136 IEIRARRILKLRDKLNHILAERTGQPLERIERDTDRDYFMSAEEALEYGLVDKVL 190
>gi|221068424|ref|ZP_03544529.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Comamonas
testosteroni KF-1]
gi|220713447|gb|EED68815.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Comamonas
testosteroni KF-1]
Length = 202
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 110/191 (57%), Positives = 148/191 (77%), Gaps = 6/191 (3%)
Query: 101 GGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKD 154
G G PM++ GR + ++ S+L + R+I G V D AN++VAQLL+L++ +P+KD
Sbjct: 8 GLGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLESENPDKD 67
Query: 155 IIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSR 214
I Y+NSPGGSVTAGMAIFDT+ I+PDVST+C G+AASMGAFLLSAG KGKRY+LPN++
Sbjct: 68 ISFYINSPGGSVTAGMAIFDTMNFIKPDVSTLCTGMAASMGAFLLSAGAKGKRYALPNAQ 127
Query: 215 IMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEE 274
+MIHQPLGGA+G ++I++ A E+L + LN L+ TGQ LEKI DT+RD+F+SA+E
Sbjct: 128 VMIHQPLGGARGQATEIEIHAREILKTRERLNKILAERTGQPLEKIQNDTERDYFLSADE 187
Query: 275 AKDYGLIDGVV 285
AKDYGL+D V+
Sbjct: 188 AKDYGLVDQVI 198
>gi|398867303|ref|ZP_10622767.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM78]
gi|398237281|gb|EJN23035.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM78]
Length = 211
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 112/201 (55%), Positives = 150/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG K
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAK 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKRY LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G+TLE+I DT
Sbjct: 126 GKRYCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE A++YGLID V+
Sbjct: 186 NRDNFMSAEAAREYGLIDEVI 206
>gi|325577258|ref|ZP_08147742.1| ATP-dependent Clp protease, protease subunit [Haemophilus
parainfluenzae ATCC 33392]
gi|419802180|ref|ZP_14327381.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus parainfluenzae HK262]
gi|325160840|gb|EGC72961.1| ATP-dependent Clp protease, protease subunit [Haemophilus
parainfluenzae ATCC 33392]
gi|385191502|gb|EIF38916.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus parainfluenzae HK262]
Length = 193
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 140/177 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L++ DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPKKDINIYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDV T+C+G A SMGAFLL+ GT GKR +LPN+R+MIHQPLGG +G SD
Sbjct: 76 AIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGTAGKRAALPNARVMIHQPLGGFRGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I + A E+L K LN L++HTGQ++E+I +DTDRD FMSAEEAK YGL+D V++
Sbjct: 136 IQIHAQEILKIKQTLNERLAFHTGQSIERIEKDTDRDNFMSAEEAKAYGLVDDVLIK 192
>gi|407795375|ref|ZP_11142334.1| ATP-dependent Clp protease proteolytic subunit [Salimicrobium sp.
MJ3]
gi|407020260|gb|EKE32973.1| ATP-dependent Clp protease proteolytic subunit [Salimicrobium sp.
MJ3]
Length = 192
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 138/177 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D+++N IVAQLL+L A DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIMLGSPIDDNVSNSIVAQLLFLAADDPDKDISLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT++ I+PDVST+C G+AASMGAFLL+AGT+GKRY+LPNS +MIHQPLGG QG SD
Sbjct: 76 AIFDTMQFIKPDVSTICTGMAASMGAFLLNAGTEGKRYALPNSEVMIHQPLGGTQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++ AN ++ + LN LS TGQ E I DTDRD FM A EA DYGLID V+ N
Sbjct: 136 IEIHANRIIRMREKLNKILSERTGQPYEVIQRDTDRDNFMDAHEAVDYGLIDKVMEN 192
>gi|78778230|ref|YP_394545.1| ATP-dependent Clp protease proteolytic subunit [Sulfurimonas
denitrificans DSM 1251]
gi|124015202|sp|Q30NX1.1|CLPP_SULDN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78498770|gb|ABB45310.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sulfurimonas
denitrificans DSM 1251]
Length = 196
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 141/180 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D +A+ IVAQ+L+L+A DP KDI Y+NSPGG VTAGM
Sbjct: 16 RSYDIYSRLLKDRIIMLSGEVNDAVASSIVAQMLFLEAEDPEKDIYFYINSPGGVVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ +IRPDV+T+CVG AASMGAFLLS+G KGKRY+LP++RIMIHQPLGGAQG +D
Sbjct: 76 AIYDTMNYIRPDVATICVGQAASMGAFLLSSGAKGKRYALPHARIMIHQPLGGAQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I +QA E+L K LN L+ + Q+++K+ +DTDRD FMSAEE+K+YG+ID V++ K
Sbjct: 136 IAIQAKEILRMKEELNAILAKNCSQSIKKVEKDTDRDNFMSAEESKEYGMIDEVLLKKSK 195
>gi|408373741|ref|ZP_11171435.1| ATP-dependent Clp protease, proteolytic subunitclpp [Alcanivorax
hongdengensis A-11-3]
gi|407766445|gb|EKF74888.1| ATP-dependent Clp protease, proteolytic subunitclpp [Alcanivorax
hongdengensis A-11-3]
Length = 218
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 104/172 (60%), Positives = 142/172 (82%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L++ +P+KDI +Y+NSPGGSVTAGM+++
Sbjct: 42 DIYSRLLKERVIFMIGQVEDHMANLIVAQMLFLESENPDKDIHLYINSPGGSVTAGMSVY 101
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ ++PDVST+CVG AASMGAFLL+AG GKR++LPN+R+MIHQPLGG QG SDI++
Sbjct: 102 DTMQFVKPDVSTMCVGQAASMGAFLLAAGAHGKRFALPNARVMIHQPLGGFQGQASDIEI 161
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K LN L++HTGQ LE++ +DTDRD FM AEEAK+YGL+D V+
Sbjct: 162 HAKEILKIKGQLNNLLAHHTGQPLERLEKDTDRDNFMGAEEAKEYGLVDAVL 213
>gi|365093545|ref|ZP_09330610.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
sp. NO-1]
gi|363414425|gb|EHL21575.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
sp. NO-1]
Length = 194
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPV D AN++VAQLL+L++ +P+KDI Y+NSPGGSV+AGM
Sbjct: 16 RSYDIYSRLLKERVIFLVGPVNDQTANLVVAQLLFLESENPDKDISFYINSPGGSVSAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT+ I+PDVST+C G+AASMGAFLL+AG KGKR++LPNS++MIHQPLGG QG ++
Sbjct: 76 AIFDTMNFIKPDVSTLCTGMAASMGAFLLAAGAKGKRFALPNSKVMIHQPLGGMQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L + LN L+ TGQ LEKI DT+RD+F+SAEE+K+YGL+D V+
Sbjct: 136 IEIHAREILKTREQLNKILAERTGQPLEKIQRDTERDYFLSAEESKEYGLVDQVI 190
>gi|375306341|ref|ZP_09771639.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus sp.
Aloe-11]
gi|375081594|gb|EHS59804.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus sp.
Aloe-11]
Length = 198
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D +AN I+AQ+L+L A DP KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT+++I+PDVST+CVG+AASMGAFLL+AG KGKR++LPNS IMIHQPLGGAQG +D
Sbjct: 76 AIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGAQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I+++A +L + LN L+ TGQ LE+I +DTDRD+FMSA++AK+YG+ID V+
Sbjct: 136 IEIRARRILKMRDKLNRILADRTGQPLERIEKDTDRDYFMSADDAKEYGIIDKVL 190
>gi|372268542|ref|ZP_09504590.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas sp.
S89]
Length = 214
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 149/190 (78%), Gaps = 6/190 (3%)
Query: 102 GGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDI 155
GG PM++ R ++ S+L + R+I GPVED MAN++VAQLL+L+A +P+KDI
Sbjct: 17 GGLVPMVVEQTARGERSFDIYSRLLKERVIFLVGPVEDHMANLVVAQLLFLEAENPDKDI 76
Query: 156 IMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRI 215
+Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+AG +GKRY+ PNSR+
Sbjct: 77 HLYINSPGGSVTAGMSIYDTMQFIKPDVSTMCIGQACSMGAFLLTAGAEGKRYATPNSRV 136
Query: 216 MIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEA 275
MIHQP GGAQG SDI + A E+L +A LN +++HTG+T+ +I DTDRD F+SA+EA
Sbjct: 137 MIHQPSGGAQGQASDIHIHAQEILKIRARLNELMAHHTGRTVAEIERDTDRDRFLSADEA 196
Query: 276 KDYGLIDGVV 285
K+YGL+D V+
Sbjct: 197 KEYGLVDEVL 206
>gi|390456222|ref|ZP_10241750.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
peoriae KCTC 3763]
Length = 198
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D +AN I+AQ+L+L A DP KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT+++I+PDVST+CVG+AASMGAFLL+AG KGKR++LPNS IMIHQPLGGAQG +D
Sbjct: 76 AIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGAQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I+++A +L + LN L+ TGQ LE+I +DTDRD+FMSA++AK+YG+ID V+
Sbjct: 136 IEIRARRILKMRDKLNRILADRTGQPLERIEKDTDRDYFMSADDAKEYGIIDKVL 190
>gi|427724491|ref|YP_007071768.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
gi|427356211|gb|AFY38934.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
Length = 218
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 151/204 (74%), Gaps = 11/204 (5%)
Query: 88 SSPYIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVA 141
S+PY T++ G G PM++ R ++ S+L + RII G ++D +A+ IVA
Sbjct: 15 SAPY--TFSMG---GAVVPMVVEQSGMGERAFDLYSRLLRERIIFLGSAIDDTVADSIVA 69
Query: 142 QLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSA 201
QLL+LDA D KDI +Y+NSPGGSV AGMAI+DT++ IRPDV T+C G+AASMGAFLLS
Sbjct: 70 QLLFLDAEDAEKDIQIYVNSPGGSVYAGMAIYDTMQQIRPDVVTICYGIAASMGAFLLSG 129
Query: 202 GTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKIN 261
GTKGKR +LP+SR+MIHQPLGGAQG DI++QA E+L+ K LN ++ HTGQ +K+
Sbjct: 130 GTKGKRMALPSSRVMIHQPLGGAQGQAVDIEIQAKEILYIKEKLNSLIADHTGQAFDKVA 189
Query: 262 EDTDRDFFMSAEEAKDYGLIDGVV 285
EDT+RDF+MSAEEA YGLID V+
Sbjct: 190 EDTERDFYMSAEEACAYGLIDKVI 213
>gi|226314841|ref|YP_002774737.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
gi|226097791|dbj|BAH46233.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
Length = 198
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P+ D +ANI+VAQLL+L A DP KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDVST+C+G+AASMGAFLL+AG KGKR++LPNS +MIHQPLGGAQG SD
Sbjct: 76 AIYDTMHFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGAQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +L + +LN L+ TGQ LE+I +DTDRD F+SA EA +YGLID V+
Sbjct: 136 IEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAAEAVEYGLIDKVI 190
>gi|428780533|ref|YP_007172319.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
gi|428694812|gb|AFZ50962.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
Length = 217
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 140/172 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G V+D +A+ I AQ+L+L+A DP KDI +Y+NSPGGSV AGMAI+
Sbjct: 36 DLYSRLLRERIVFLGQQVDDQIADSIAAQMLFLEAEDPEKDIQLYINSPGGSVYAGMAIY 95
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDV+T+C G+AASMGAFLL+ G +GKR SLPNSRIMIHQPLGGAQG +DI++
Sbjct: 96 DTMQQIQPDVATICYGIAASMGAFLLAGGAEGKRMSLPNSRIMIHQPLGGAQGQAADIEI 155
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L+ K LN L++HT Q LE+I EDT+RDF+MSA EAKDYGLID ++
Sbjct: 156 QAREILYIKNTLNELLAHHTKQPLERITEDTERDFYMSATEAKDYGLIDEMI 207
>gi|410636602|ref|ZP_11347195.1| ATP-dependent Clp protease, protease subunit [Glaciecola lipolytica
E3]
gi|410143884|dbj|GAC14400.1| ATP-dependent Clp protease, protease subunit [Glaciecola lipolytica
E3]
Length = 209
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 136/177 (76%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + +I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKENVIFLVGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDVSTVCVG AASMGAFLLS G KGKRY LPNSR+MIHQPLGG QG SD
Sbjct: 85 AIYDTMNFIKPDVSTVCVGQAASMGAFLLSGGAKGKRYCLPNSRVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
++ A E+L K LN ++ HTGQ EK+ DTDRD F+SA E+K+YGLID V+ N
Sbjct: 145 FEIHAKEILSIKEKLNRLMAEHTGQDYEKVARDTDRDNFLSASESKEYGLIDQVLTN 201
>gi|418324661|ref|ZP_12935892.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pettenkoferi VCU012]
gi|365225160|gb|EHM66411.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pettenkoferi VCU012]
Length = 194
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 145/180 (80%), Gaps = 1/180 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D +KDI +Y+NSPGGSV+AG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDADKDIYLYINSPGGSVSAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+CVG+AASMG+FLL+AG KGKRY+LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICVGMAASMGSFLLAAGAKGKRYALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ AN +L +A LN L+ TGQ++++I +DTDRD F+SA+EAKDYGLID VM P +
Sbjct: 136 IEIAANHILKTRAKLNKILAERTGQSIDQIEKDTDRDNFLSADEAKDYGLIDE-VMQPEE 194
>gi|333361419|pdb|3QWD|A Chain A, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361420|pdb|3QWD|B Chain B, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361421|pdb|3QWD|C Chain C, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361422|pdb|3QWD|D Chain D, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361423|pdb|3QWD|E Chain E, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361424|pdb|3QWD|F Chain F, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361425|pdb|3QWD|G Chain G, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361426|pdb|3QWD|H Chain H, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361427|pdb|3QWD|I Chain I, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361428|pdb|3QWD|J Chain J, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361429|pdb|3QWD|K Chain K, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361430|pdb|3QWD|L Chain L, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361431|pdb|3QWD|M Chain M, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361432|pdb|3QWD|N Chain N, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|374977802|pdb|3V5E|A Chain A, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977803|pdb|3V5E|B Chain B, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977804|pdb|3V5E|C Chain C, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977805|pdb|3V5E|D Chain D, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977806|pdb|3V5E|E Chain E, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977807|pdb|3V5E|F Chain F, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977808|pdb|3V5E|G Chain G, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977809|pdb|3V5E|H Chain H, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977810|pdb|3V5E|I Chain I, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977811|pdb|3V5E|J Chain J, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977812|pdb|3V5E|K Chain K, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977813|pdb|3V5E|L Chain L, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977814|pdb|3V5E|M Chain M, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977815|pdb|3V5E|N Chain N, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
Length = 203
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 106/184 (57%), Positives = 144/184 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ AN +L + LN LS TGQ++EKI +DTDRD F++AEEAK+YGLID V++ K
Sbjct: 136 IEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETK 195
Query: 291 ILQP 294
P
Sbjct: 196 WSHP 199
>gi|332532271|ref|ZP_08408152.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
haloplanktis ANT/505]
gi|332038369|gb|EGI74814.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
haloplanktis ANT/505]
Length = 205
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 141/180 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED+MAN+I+AQ+L+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKERIIFLTGQVEDNMANLILAQMLFLESENPDKDIFLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDVST+CVG AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 85 AIYDTMNFIKPDVSTICVGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
++ A E+L K LN ++ HTGQ L+ I++DTDRD FMSA +A DYGL+D V N K
Sbjct: 145 FEIHAKEILSIKDKLNRLMAEHTGQPLDIISKDTDRDNFMSASQAVDYGLVDSVFTNRDK 204
>gi|374321531|ref|YP_005074660.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
terrae HPL-003]
gi|357200540|gb|AET58437.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
terrae HPL-003]
Length = 198
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D +AN I+AQ+L+L A DP KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYVNSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT+++I+PDVST+CVG+AASMGAFLL+AG KGKR++LPNS IMIHQPLGGAQG +D
Sbjct: 76 AIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGAQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I+++A +L + LN L+ TGQ LE+I +DTDRD+FMSA++AK+YG+ID V+
Sbjct: 136 IEIRARRILKMRDKLNRILADRTGQPLERIEKDTDRDYFMSADDAKEYGIIDKVL 190
>gi|297569273|ref|YP_003690617.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurivibrio alkaliphilus AHT2]
gi|296925188|gb|ADH85998.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurivibrio alkaliphilus AHT2]
Length = 200
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 145/180 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V DD+AN+I+AQ+L+L+A DP+KDI Y+NSPGG VTAG+
Sbjct: 16 RSYDIYSRLLKERIIFLGTGVNDDVANVIIAQMLFLEADDPDKDITFYINSPGGVVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+R+I+ DV+T+C+G AASMGA LL+AGT+GKRY+LPNSRI+IHQP+GG QG SD
Sbjct: 76 AIYDTMRYIKCDVATLCLGQAASMGAVLLAAGTEGKRYALPNSRILIHQPMGGYQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
ID+ A E+L + +LN L+ HTGQ++++I +DT+RD+FMSAEE+K YG+ID V+ K
Sbjct: 136 IDIHAKEILRMRQDLNRILASHTGQSIKRIQKDTERDYFMSAEESKTYGIIDKVLYERTK 195
>gi|269798318|ref|YP_003312218.1| ATP-dependent Clp protease proteolytic subunit ClpP [Veillonella
parvula DSM 2008]
gi|269094947|gb|ACZ24938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
parvula DSM 2008]
Length = 197
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 110/196 (56%), Positives = 151/196 (77%), Gaps = 9/196 (4%)
Query: 91 YIPTYA-QGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAV 149
Y+P QGE+G R ++ S+L + RII GGP++D++AN ++AQ+L+L+A
Sbjct: 2 YVPIVVEQGERGE--------RSYDIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAE 53
Query: 150 DPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS 209
DP+KDI +Y+NSPGG VTAGMAI+DT+++I+PDVST+CVG AASMGA LL+AGTKGKRY+
Sbjct: 54 DPDKDIHLYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGTKGKRYA 113
Query: 210 LPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFF 269
LP++RIMIHQPLGG QG S+I++ A E+L + LNG L+ +GQ +E + DTDRD F
Sbjct: 114 LPHARIMIHQPLGGVQGQASEIEIHAREILRMREELNGILASRSGQDIEVVARDTDRDNF 173
Query: 270 MSAEEAKDYGLIDGVV 285
MSA++A +YGLID V+
Sbjct: 174 MSAQDAVEYGLIDEVL 189
>gi|384083495|ref|ZP_09994670.1| ATP-dependent Clp protease, proteolytic subunitclpp [gamma
proteobacterium HIMB30]
Length = 201
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 17 RSYDIYSRLLKERVIFMVGQVEDHMANLIVAQLLFLESENPDKDIHLYINSPGGSVTAGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C+G AASMGAFLL+ G KGKR++LPNSR+MIHQPLGG G SD
Sbjct: 77 AIYDTMQFIKPDVSTLCIGQAASMGAFLLAGGAKGKRFALPNSRMMIHQPLGGYSGQASD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
ID+ A E+L + LN L++HTGQT+++I +DTDRD FM A EAK YGLID V+
Sbjct: 137 IDIHAKEILKIREKLNSKLAHHTGQTIKQIAKDTDRDRFMDAAEAKSYGLIDDVL 191
>gi|308067009|ref|YP_003868614.1| ATP-dependent Clp protease proteolytic subunit(endopeptidase Clp)
[Paenibacillus polymyxa E681]
gi|305856288|gb|ADM68076.1| ATP-dependent Clp protease proteolytic subunit(Endopeptidase Clp)
[Paenibacillus polymyxa E681]
Length = 193
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D +AN I+AQ+L+L A DP KDI +Y+NSPGGS+TAGM
Sbjct: 11 RAYDIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYINSPGGSITAGM 70
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT+++I+PDVST+CVG+AASMGAFLL+AG KGKR++LPNS IMIHQPLGGAQG +D
Sbjct: 71 AIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGAQGQATD 130
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I+++A +L + LN L+ TGQ LE+I +DTDRD+FMSA++AK+YG+ID V+
Sbjct: 131 IEIRARRILKMRDKLNRILADRTGQPLERIEKDTDRDYFMSADDAKEYGIIDKVL 185
>gi|134295958|ref|YP_001119693.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
vietnamiensis G4]
gi|387902477|ref|YP_006332816.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp.
KJ006]
gi|166201808|sp|A4JF05.1|CLPP_BURVG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134139115|gb|ABO54858.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
vietnamiensis G4]
gi|387577369|gb|AFJ86085.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp.
KJ006]
Length = 217
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 145/177 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R++ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 39 RSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 98
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C+GLAASMGAFLL++G KGKR++LPNSR+MIHQPLGGA+G SD
Sbjct: 99 AIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASD 158
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++QA E+L+ K LN L+ HTGQ +E+I DTDRD FMS+++AK YGLID V++
Sbjct: 159 IEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSDDAKAYGLIDQVLLK 215
>gi|116256435|sp|Q3ANI8.2|CLPP1_SYNSC RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
Length = 207
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V+D +A+ +VAQ+L+L+A DP KDI +Y+NSPGGSVTAG+
Sbjct: 21 RAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGL 80
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ + PDV T+C GLAASMGAFLLS GTKGKR +LPN+RIMIHQPLGGAQG D
Sbjct: 81 AIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVD 140
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LNG ++ HTGQ L+KI+EDTDRD+F+S EA +YGLID VV
Sbjct: 141 IEIQAKEILYLKETLNGLMAEHTGQPLDKISEDTDRDYFLSPAEAVEYGLIDRVV 195
>gi|72383092|ref|YP_292447.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. NATL2A]
gi|115311351|sp|Q46ID4.1|CLPP3_PROMT RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|72002942|gb|AAZ58744.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. NATL2A]
Length = 194
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/181 (60%), Positives = 142/181 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D +A+ +VAQ+L+L+A DP KDI +Y+NSPGGSVTAG+
Sbjct: 14 RAFDIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEADDPEKDIQLYVNSPGGSVTAGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ + PDV T+C GLAASMGAFLLS GTKGKR +LPNSRIMIHQPLGGAQG +
Sbjct: 74 AIYDTMQQVSPDVITICYGLAASMGAFLLSGGTKGKRLALPNSRIMIHQPLGGAQGQAVE 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L+ K LN L+ HTGQ ++KI+EDTDRD F+S +EA +YGLID VV N +
Sbjct: 134 IEIQAKEILYLKETLNSLLAEHTGQNIQKISEDTDRDHFLSPQEAVEYGLIDKVVSNLNS 193
Query: 291 I 291
I
Sbjct: 194 I 194
>gi|428221047|ref|YP_007105217.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
7502]
gi|427994387|gb|AFY73082.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
7502]
Length = 198
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/172 (62%), Positives = 141/172 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ ++L++ RII G V+D++AN IVA +LYLD+ DP KDI +Y+NSPGGSVTAGMAIF
Sbjct: 22 DIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPTKDIRLYINSPGGSVTAGMAIF 81
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HI+ DV+T+CVGLAASMG+FLL AGTKGKR++LP+SRIMIHQP+GG +G +DI++
Sbjct: 82 DTMQHIKSDVTTICVGLAASMGSFLLMAGTKGKRFALPHSRIMIHQPMGGTRGQATDIEI 141
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
+A E+L K LN + TGQ LEKI D DRD+F+SAEEAK+YGLID V+
Sbjct: 142 EAREILRIKKQLNLEYAKRTGQPLEKIERDMDRDYFLSAEEAKNYGLIDRVI 193
>gi|398814906|ref|ZP_10573583.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
gi|398035724|gb|EJL28955.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
Length = 200
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P+ D +ANI+VAQLL+L A DP KDI +Y+NSPGGS+TAGM
Sbjct: 18 RAYDIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPGGSITAGM 77
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDVST+C+G+AASMGAFLL+AG KGKR++LPNS +MIHQPLGGAQG SD
Sbjct: 78 AIYDTMHFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGAQGQASD 137
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +L + +LN L+ TGQ LE+I +DTDRD F+SA EA +YGLID V+
Sbjct: 138 IEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAAEAVEYGLIDKVI 192
>gi|260913095|ref|ZP_05919577.1| ATP-dependent Clp protease [Pasteurella dagmatis ATCC 43325]
gi|260632682|gb|EEX50851.1| ATP-dependent Clp protease [Pasteurella dagmatis ATCC 43325]
Length = 193
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 139/177 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L++ DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPEKDINIYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PD+ T+CVG A SMGAFLL+ GT GKR +LPN+R+MIHQPLGG +G SD
Sbjct: 76 AIYDTMQFIKPDIRTLCVGQACSMGAFLLAGGTAGKRIALPNARVMIHQPLGGFRGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I + A E+L K LN L++HTGQ++E+I DTDRD FMSAEEAK YGL+D V++
Sbjct: 136 IQIHAQEILKIKQTLNERLAFHTGQSIERIERDTDRDNFMSAEEAKAYGLVDEVLVK 192
>gi|164686707|ref|ZP_02210735.1| hypothetical protein CLOBAR_00302 [Clostridium bartlettii DSM
16795]
gi|164604097|gb|EDQ97562.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium bartlettii DSM 16795]
Length = 193
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII V D A+++VAQLL+L+A DP+KDI +Y+NSPGGSVTAGM
Sbjct: 16 RAYDIYSRLLKDRIIFLSDEVNDTTASLVVAQLLFLEAEDPDKDIHLYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G+AASMGAFLL+AG KGKR++LPNS IMIHQPLGGA+G +D
Sbjct: 76 AIYDTMQYIKPDVSTICIGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGAKGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +L K LN LS TGQ +EKI EDT+RD FMSA+EAK+YGLID V+
Sbjct: 136 IEIHAKWILKIKERLNKILSERTGQPIEKIQEDTERDNFMSAQEAKEYGLIDEVI 190
>gi|359440399|ref|ZP_09230319.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20429]
gi|392534093|ref|ZP_10281230.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
arctica A 37-1-2]
gi|358037712|dbj|GAA66568.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20429]
Length = 205
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 141/180 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED+MAN+I+AQ+L+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKERIIFLTGQVEDNMANLILAQMLFLESENPDKDIFLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDVST+CVG AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 85 AIYDTMNFIKPDVSTICVGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
++ A E+L K LN ++ HTGQ L+ I++DTDRD FMSA +A DYGL+D V N K
Sbjct: 145 FEIHAKEILSIKDKLNRLMAEHTGQPLDIISKDTDRDNFMSATQAVDYGLVDSVFTNRDK 204
>gi|251794211|ref|YP_003008942.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
gi|247541837|gb|ACS98855.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
Length = 195
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D +AN I+AQ+L+L A DP KDI +Y+NSPGGS+TAGM
Sbjct: 18 RAYDIYSRLLKDRIIFLGSGVNDVVANSIIAQMLFLAAEDPEKDISLYINSPGGSITAGM 77
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG+AASMGAFLL+AG GKRY+LPNS +MIHQPLGGA+G SD
Sbjct: 78 AIYDTMQYIKPDVSTICVGMAASMGAFLLTAGAIGKRYALPNSEVMIHQPLGGAEGQASD 137
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I+++A ++ + LNG L+ +GQ LE+I +DTDRD+FMSAEEA+ YGL+D V+
Sbjct: 138 IEIRARRIIKMRDKLNGILAERSGQPLERIEKDTDRDYFMSAEEARQYGLVDKVI 192
>gi|15923758|ref|NP_371292.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus Mu50]
gi|15926445|ref|NP_373978.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus N315]
gi|21282459|ref|NP_645547.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MW2]
gi|49483025|ref|YP_040249.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MRSA252]
gi|49485640|ref|YP_042861.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57650109|ref|YP_185707.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus COL]
gi|82750474|ref|YP_416215.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus RF122]
gi|87161484|ref|YP_493453.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus USA300_FPR3757]
gi|88194551|ref|YP_499347.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus NCTC 8325]
gi|148267228|ref|YP_001246171.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus JH9]
gi|150393277|ref|YP_001315952.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus JH1]
gi|151220948|ref|YP_001331770.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156979096|ref|YP_001441355.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus Mu3]
gi|161509038|ref|YP_001574697.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|221141842|ref|ZP_03566335.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253317258|ref|ZP_04840471.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus str. CF-Marseille]
gi|253731397|ref|ZP_04865562.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253732783|ref|ZP_04866948.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|255005559|ref|ZP_05144160.2| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257424888|ref|ZP_05601315.1| clp protease [Staphylococcus aureus subsp. aureus 55/2053]
gi|257427556|ref|ZP_05603955.1| clp protease [Staphylococcus aureus subsp. aureus 65-1322]
gi|257430187|ref|ZP_05606571.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus 68-397]
gi|257432888|ref|ZP_05609248.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus E1410]
gi|257435792|ref|ZP_05611840.1| clp protease [Staphylococcus aureus subsp. aureus M876]
gi|257794910|ref|ZP_05643889.1| clp protease [Staphylococcus aureus A9781]
gi|258418226|ref|ZP_05682491.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A9763]
gi|258421524|ref|ZP_05684449.1| clp protease [Staphylococcus aureus A9719]
gi|258423417|ref|ZP_05686308.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9635]
gi|258439133|ref|ZP_05690177.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9299]
gi|258440939|ref|ZP_05690774.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A8115]
gi|258445769|ref|ZP_05693946.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6300]
gi|258449581|ref|ZP_05697683.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6224]
gi|258452184|ref|ZP_05700200.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5948]
gi|258453981|ref|ZP_05701953.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5937]
gi|262049552|ref|ZP_06022422.1| hypothetical protein SAD30_0974 [Staphylococcus aureus D30]
gi|262052698|ref|ZP_06024889.1| hypothetical protein SA930_1868 [Staphylococcus aureus 930918-3]
gi|269202390|ref|YP_003281659.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ED98]
gi|282895064|ref|ZP_06303285.1| Clp protease [Staphylococcus aureus A8117]
gi|282903398|ref|ZP_06311289.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus C160]
gi|282905178|ref|ZP_06313035.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus Btn1260]
gi|282908157|ref|ZP_06315988.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282910415|ref|ZP_06318219.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282913610|ref|ZP_06321399.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M899]
gi|282916110|ref|ZP_06323873.1| Clp protease [Staphylococcus aureus subsp. aureus D139]
gi|282918561|ref|ZP_06326298.1| Clp protease [Staphylococcus aureus subsp. aureus C427]
gi|282922066|ref|ZP_06329763.1| Clp protease [Staphylococcus aureus A9765]
gi|282923527|ref|ZP_06331207.1| Clp protease [Staphylococcus aureus subsp. aureus C101]
gi|282926635|ref|ZP_06334265.1| Clp protease [Staphylococcus aureus A10102]
gi|283769931|ref|ZP_06342823.1| ATP-dependent Clp protease subunit [Staphylococcus aureus subsp.
aureus H19]
gi|283957600|ref|ZP_06375053.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus A017934/97]
gi|284023791|ref|ZP_06378189.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus 132]
gi|293500653|ref|ZP_06666504.1| Clp protease [Staphylococcus aureus subsp. aureus 58-424]
gi|293509601|ref|ZP_06668312.1| Clp protease [Staphylococcus aureus subsp. aureus M809]
gi|293524187|ref|ZP_06670874.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M1015]
gi|294850496|ref|ZP_06791225.1| Clp protease [Staphylococcus aureus A9754]
gi|295406492|ref|ZP_06816298.1| Clp protease [Staphylococcus aureus A8819]
gi|295427347|ref|ZP_06819982.1| Clp protease [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296276994|ref|ZP_06859501.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MR1]
gi|297208504|ref|ZP_06924933.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|297245218|ref|ZP_06929092.1| Clp protease [Staphylococcus aureus A8796]
gi|297590298|ref|ZP_06948937.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MN8]
gi|300912596|ref|ZP_07130039.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH70]
gi|304381609|ref|ZP_07364259.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|379014058|ref|YP_005290294.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VC40]
gi|379020540|ref|YP_005297202.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus M013]
gi|379795239|ref|YP_005325237.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MSHR1132]
gi|384547051|ref|YP_005736304.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ED133]
gi|384549630|ref|YP_005738882.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus JKD6159]
gi|384861436|ref|YP_005744156.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|384864093|ref|YP_005749452.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|384868298|ref|YP_005748494.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH60]
gi|384869354|ref|YP_005752068.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus T0131]
gi|385781094|ref|YP_005757265.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 11819-97]
gi|386728536|ref|YP_006194919.1| ATP-dependent endopeptidase clp proteolytic subunit [Staphylococcus
aureus subsp. aureus 71193]
gi|386830410|ref|YP_006237064.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus HO 5096 0412]
gi|387142462|ref|YP_005730855.1| putative ATP-dependent Clp protease proteolyticsubunit
[Staphylococcus aureus subsp. aureus TW20]
gi|387149931|ref|YP_005741495.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus 04-02981]
gi|387602124|ref|YP_005733645.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ST398]
gi|387779903|ref|YP_005754701.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus LGA251]
gi|404478169|ref|YP_006709599.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus 08BA02176]
gi|415683595|ref|ZP_11448811.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS00]
gi|415689458|ref|ZP_11452760.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS01]
gi|415693848|ref|ZP_11455519.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS03]
gi|416842650|ref|ZP_11905104.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O11]
gi|416847874|ref|ZP_11907423.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O46]
gi|417650451|ref|ZP_12300222.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21189]
gi|417652532|ref|ZP_12302279.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21172]
gi|417655183|ref|ZP_12304897.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21193]
gi|417796631|ref|ZP_12443837.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21305]
gi|417798637|ref|ZP_12445797.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21310]
gi|417802514|ref|ZP_12449572.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21318]
gi|417887242|ref|ZP_12531375.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21195]
gi|417890528|ref|ZP_12534601.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21200]
gi|417892365|ref|ZP_12536415.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21201]
gi|417896583|ref|ZP_12540529.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21235]
gi|417898150|ref|ZP_12542074.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21259]
gi|417902321|ref|ZP_12546188.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21266]
gi|417904583|ref|ZP_12548405.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21269]
gi|418280847|ref|ZP_12893672.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21178]
gi|418283166|ref|ZP_12895922.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21202]
gi|418284347|ref|ZP_12897073.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21209]
gi|418308841|ref|ZP_12920432.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21194]
gi|418309577|ref|ZP_12921131.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21331]
gi|418313751|ref|ZP_12925236.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21334]
gi|418315200|ref|ZP_12926664.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21340]
gi|418318354|ref|ZP_12929759.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21232]
gi|418322160|ref|ZP_12933497.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus VCU006]
gi|418423914|ref|ZP_12997054.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS1]
gi|418426888|ref|ZP_12999909.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS2]
gi|418429820|ref|ZP_13002744.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS3a]
gi|418432714|ref|ZP_13005507.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS4]
gi|418436430|ref|ZP_13008239.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS5]
gi|418439328|ref|ZP_13011043.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS6]
gi|418442304|ref|ZP_13013916.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS7]
gi|418445435|ref|ZP_13016920.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS8]
gi|418448373|ref|ZP_13019772.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS9]
gi|418451192|ref|ZP_13022531.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS10]
gi|418454216|ref|ZP_13025483.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11a]
gi|418457120|ref|ZP_13028329.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11b]
gi|418561062|ref|ZP_13125562.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21252]
gi|418561317|ref|ZP_13125809.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21262]
gi|418565775|ref|ZP_13130170.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21264]
gi|418566869|ref|ZP_13131236.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21272]
gi|418570534|ref|ZP_13134800.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21283]
gi|418574077|ref|ZP_13138254.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21333]
gi|418578667|ref|ZP_13142762.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1114]
gi|418581482|ref|ZP_13145563.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1605]
gi|418595736|ref|ZP_13159333.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21342]
gi|418598777|ref|ZP_13162284.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21343]
gi|418601712|ref|ZP_13165128.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21345]
gi|418639487|ref|ZP_13201734.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-3]
gi|418640943|ref|ZP_13203159.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-24]
gi|418644345|ref|ZP_13206491.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-55]
gi|418647139|ref|ZP_13209218.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-88]
gi|418650986|ref|ZP_13212997.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-91]
gi|418654288|ref|ZP_13216201.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-99]
gi|418656309|ref|ZP_13218123.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-105]
gi|418657987|ref|ZP_13219735.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-111]
gi|418660942|ref|ZP_13222548.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-122]
gi|418872430|ref|ZP_13426769.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-125]
gi|418874789|ref|ZP_13429055.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC93]
gi|418877613|ref|ZP_13431852.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1165]
gi|418880473|ref|ZP_13434693.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1213]
gi|418883398|ref|ZP_13437597.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1769]
gi|418886060|ref|ZP_13440210.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1150]
gi|418888666|ref|ZP_13442802.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1524]
gi|418891410|ref|ZP_13445527.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1176]
gi|418894225|ref|ZP_13448326.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1057]
gi|418897185|ref|ZP_13451258.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC341D]
gi|418900155|ref|ZP_13454214.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1214]
gi|418903043|ref|ZP_13457084.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1770]
gi|418904859|ref|ZP_13458888.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|418908561|ref|ZP_13462569.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG149]
gi|418913957|ref|ZP_13467929.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|418916633|ref|ZP_13470594.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1267]
gi|418919641|ref|ZP_13473584.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC348]
gi|418922437|ref|ZP_13476354.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1233]
gi|418925006|ref|ZP_13478909.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG2018]
gi|418928091|ref|ZP_13481977.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1612]
gi|418930802|ref|ZP_13484650.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1750]
gi|418933703|ref|ZP_13487527.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC128]
gi|418948897|ref|ZP_13501177.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-157]
gi|418949913|ref|ZP_13502132.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-160]
gi|418952635|ref|ZP_13504651.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-189]
gi|418979235|ref|ZP_13527032.1| ClpP [Staphylococcus aureus subsp. aureus DR10]
gi|418981671|ref|ZP_13529386.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1242]
gi|418985309|ref|ZP_13532998.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1500]
gi|418987671|ref|ZP_13535344.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1835]
gi|418990658|ref|ZP_13538319.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1096]
gi|418993481|ref|ZP_13541118.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG290]
gi|419775511|ref|ZP_14301450.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CO-23]
gi|419785631|ref|ZP_14311382.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-M]
gi|421149542|ref|ZP_15609200.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newbould 305]
gi|422744913|ref|ZP_16798868.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA177]
gi|422746628|ref|ZP_16800559.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA131]
gi|424770820|ref|ZP_18198002.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CM05]
gi|424784626|ref|ZP_18211436.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus CN79]
gi|440708128|ref|ZP_20888804.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21282]
gi|440734249|ref|ZP_20913861.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus DSM 20231]
gi|443637771|ref|ZP_21121839.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21236]
gi|443640354|ref|ZP_21124345.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21196]
gi|448741163|ref|ZP_21723134.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/314250]
gi|448745335|ref|ZP_21727190.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/Y21]
gi|54036854|sp|P63786.1|CLPP_STAAW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|54036862|sp|P99089.1|CLPP_STAAN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|54040892|sp|P63785.1|CLPP_STAAM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56748671|sp|Q6GB62.1|CLPP_STAAS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56748685|sp|Q6GIM3.1|CLPP_STAAR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460165|sp|Q5HHQ0.1|CLPP_STAAC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90183185|sp|Q2YSF8.1|CLPP_STAAB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116243169|sp|Q2G036.1|CLPP_STAA8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|124013828|sp|Q2FIM5.1|CLPP_STAA3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214713|sp|A7WZR9.1|CLPP_STAA1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|172048797|sp|A6QF76.1|CLPP_STAAE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082468|sp|A6TZP7.1|CLPP_STAA2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082469|sp|A5IQX2.1|CLPP_STAA9 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082470|sp|A8Z045.1|CLPP_STAAT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|13700659|dbj|BAB41956.1| clpP [Staphylococcus aureus subsp. aureus N315]
gi|14246537|dbj|BAB56930.1| ATP-dependent Clp protease proteolytic subunit homologue
[Staphylococcus aureus subsp. aureus Mu50]
gi|21203896|dbj|BAB94595.1| clpP [Staphylococcus aureus subsp. aureus MW2]
gi|49241154|emb|CAG39832.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MRSA252]
gi|49244083|emb|CAG42509.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MSSA476]
gi|57284295|gb|AAW36389.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus COL]
gi|82656005|emb|CAI80410.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus RF122]
gi|87127458|gb|ABD21972.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87202109|gb|ABD29919.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|147740297|gb|ABQ48595.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus subsp. aureus JH9]
gi|149945729|gb|ABR51665.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus JH1]
gi|150373748|dbj|BAF67008.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156721231|dbj|BAF77648.1| ATP-dependent Clp protease proteolytic subunit homologue
[Staphylococcus aureus subsp. aureus Mu3]
gi|160367847|gb|ABX28818.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253724847|gb|EES93576.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253729257|gb|EES97986.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|257272458|gb|EEV04581.1| clp protease [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275749|gb|EEV07222.1| clp protease [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279384|gb|EEV09985.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus 68-397]
gi|257282303|gb|EEV12438.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus E1410]
gi|257284983|gb|EEV15102.1| clp protease [Staphylococcus aureus subsp. aureus M876]
gi|257788882|gb|EEV27222.1| clp protease [Staphylococcus aureus A9781]
gi|257839019|gb|EEV63498.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A9763]
gi|257842450|gb|EEV66874.1| clp protease [Staphylococcus aureus A9719]
gi|257846478|gb|EEV70501.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9635]
gi|257847705|gb|EEV71702.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9299]
gi|257852453|gb|EEV76374.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A8115]
gi|257855345|gb|EEV78283.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6300]
gi|257857089|gb|EEV79988.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6224]
gi|257860399|gb|EEV83231.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5948]
gi|257863846|gb|EEV86602.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5937]
gi|259159395|gb|EEW44448.1| hypothetical protein SA930_1868 [Staphylococcus aureus 930918-3]
gi|259162388|gb|EEW46960.1| hypothetical protein SAD30_0974 [Staphylococcus aureus D30]
gi|262074680|gb|ACY10653.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ED98]
gi|269940345|emb|CBI48722.1| putative ATP-dependent Clp protease proteolyticsubunit
[Staphylococcus aureus subsp. aureus TW20]
gi|282314395|gb|EFB44785.1| Clp protease [Staphylococcus aureus subsp. aureus C101]
gi|282317695|gb|EFB48067.1| Clp protease [Staphylococcus aureus subsp. aureus C427]
gi|282320058|gb|EFB50405.1| Clp protease [Staphylococcus aureus subsp. aureus D139]
gi|282322642|gb|EFB52964.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M899]
gi|282325807|gb|EFB56115.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282327822|gb|EFB58104.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282331585|gb|EFB61097.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus Btn1260]
gi|282591528|gb|EFB96600.1| Clp protease [Staphylococcus aureus A10102]
gi|282593724|gb|EFB98716.1| Clp protease [Staphylococcus aureus A9765]
gi|282596353|gb|EFC01314.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus C160]
gi|282762560|gb|EFC02699.1| Clp protease [Staphylococcus aureus A8117]
gi|283460078|gb|EFC07168.1| ATP-dependent Clp protease subunit [Staphylococcus aureus subsp.
aureus H19]
gi|283470062|emb|CAQ49273.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ST398]
gi|283791051|gb|EFC29866.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus A017934/97]
gi|285816470|gb|ADC36957.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus 04-02981]
gi|290921150|gb|EFD98211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M1015]
gi|291095658|gb|EFE25919.1| Clp protease [Staphylococcus aureus subsp. aureus 58-424]
gi|291467698|gb|EFF10213.1| Clp protease [Staphylococcus aureus subsp. aureus M809]
gi|294822634|gb|EFG39074.1| Clp protease [Staphylococcus aureus A9754]
gi|294968637|gb|EFG44660.1| Clp protease [Staphylococcus aureus A8819]
gi|295128735|gb|EFG58366.1| Clp protease [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296886759|gb|EFH25663.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|297177889|gb|EFH37138.1| Clp protease [Staphylococcus aureus A8796]
gi|297576597|gb|EFH95312.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MN8]
gi|298694101|gb|ADI97323.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ED133]
gi|300886842|gb|EFK82044.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH70]
gi|302332479|gb|ADL22672.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus JKD6159]
gi|302750665|gb|ADL64842.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|304339972|gb|EFM05916.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|312438803|gb|ADQ77874.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH60]
gi|312829260|emb|CBX34102.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315129024|gb|EFT85021.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS03]
gi|315194387|gb|EFU24779.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS00]
gi|315196246|gb|EFU26600.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS01]
gi|320139896|gb|EFW31757.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA131]
gi|320142013|gb|EFW33841.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA177]
gi|323438624|gb|EGA96368.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O11]
gi|323441949|gb|EGA99586.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O46]
gi|329313489|gb|AEB87902.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus T0131]
gi|329723806|gb|EGG60334.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21189]
gi|329724642|gb|EGG61149.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21172]
gi|329729644|gb|EGG66045.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21193]
gi|334268522|gb|EGL86960.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21305]
gi|334274514|gb|EGL92832.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21318]
gi|334275498|gb|EGL93787.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21310]
gi|341840549|gb|EGS82052.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21235]
gi|341843411|gb|EGS84638.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21266]
gi|341846489|gb|EGS87681.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21269]
gi|341849148|gb|EGS90299.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21259]
gi|341854663|gb|EGS95529.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21200]
gi|341857827|gb|EGS98637.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21201]
gi|341858295|gb|EGS99092.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21195]
gi|344177005|emb|CCC87469.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus LGA251]
gi|356872229|emb|CCE58568.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MSHR1132]
gi|359829849|gb|AEV77827.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus M013]
gi|364522083|gb|AEW64833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 11819-97]
gi|365167418|gb|EHM58883.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21178]
gi|365168239|gb|EHM59592.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21202]
gi|365173650|gb|EHM64138.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21209]
gi|365223769|gb|EHM65044.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus VCU006]
gi|365235450|gb|EHM76369.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21334]
gi|365236874|gb|EHM77752.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21194]
gi|365238910|gb|EHM79738.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21331]
gi|365243223|gb|EHM83909.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21232]
gi|365243830|gb|EHM84498.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21340]
gi|371970171|gb|EHO87601.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21252]
gi|371972686|gb|EHO90060.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21264]
gi|371977662|gb|EHO94925.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21262]
gi|371980174|gb|EHO97388.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21333]
gi|371983433|gb|EHP00577.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21272]
gi|371983904|gb|EHP01037.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21283]
gi|374362755|gb|AEZ36860.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VC40]
gi|374397523|gb|EHQ68732.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21345]
gi|374398927|gb|EHQ70079.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21343]
gi|374400646|gb|EHQ71756.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21342]
gi|375016574|gb|EHS10213.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-99]
gi|375017513|gb|EHS11127.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-3]
gi|375020140|gb|EHS13681.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-24]
gi|375025890|gb|EHS19283.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-55]
gi|375026798|gb|EHS20176.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-91]
gi|375030962|gb|EHS24257.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-88]
gi|375034031|gb|EHS27209.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-105]
gi|375039561|gb|EHS32485.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-111]
gi|375039717|gb|EHS32635.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-122]
gi|375367180|gb|EHS71148.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-125]
gi|375370404|gb|EHS74213.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-157]
gi|375376349|gb|EHS79884.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-189]
gi|375378040|gb|EHS81464.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-160]
gi|377696321|gb|EHT20677.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1165]
gi|377696694|gb|EHT21049.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1114]
gi|377698573|gb|EHT22921.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1057]
gi|377705237|gb|EHT29545.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1214]
gi|377707151|gb|EHT31445.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1500]
gi|377707491|gb|EHT31784.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1242]
gi|377711709|gb|EHT35938.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1605]
gi|377716064|gb|EHT40249.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1769]
gi|377716669|gb|EHT40851.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1750]
gi|377719459|gb|EHT43629.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1835]
gi|377722780|gb|EHT46905.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1096]
gi|377727358|gb|EHT51465.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1150]
gi|377732367|gb|EHT56418.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1176]
gi|377732911|gb|EHT56961.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1213]
gi|377735760|gb|EHT59790.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1233]
gi|377738003|gb|EHT62012.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1612]
gi|377742058|gb|EHT66043.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1770]
gi|377746301|gb|EHT70272.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG2018]
gi|377746640|gb|EHT70610.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG290]
gi|377751138|gb|EHT75072.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1267]
gi|377754176|gb|EHT78085.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1524]
gi|377755900|gb|EHT79798.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG149]
gi|377757459|gb|EHT81347.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|377761964|gb|EHT85833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC341D]
gi|377766399|gb|EHT90232.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|377767166|gb|EHT90979.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC348]
gi|377771483|gb|EHT95237.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC128]
gi|377772129|gb|EHT95882.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC93]
gi|379992914|gb|EIA14363.1| ClpP [Staphylococcus aureus subsp. aureus DR10]
gi|383362393|gb|EID39746.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-M]
gi|383970734|gb|EID86827.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CO-23]
gi|384229829|gb|AFH69076.1| ClpP [Staphylococcus aureus subsp. aureus 71193]
gi|385195802|emb|CCG15411.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|387720067|gb|EIK07989.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS3a]
gi|387720500|gb|EIK08410.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS2]
gi|387722162|gb|EIK09994.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS1]
gi|387726898|gb|EIK14438.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS4]
gi|387728978|gb|EIK16450.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS5]
gi|387731240|gb|EIK18554.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS6]
gi|387737314|gb|EIK24384.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS8]
gi|387738791|gb|EIK25811.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS9]
gi|387739281|gb|EIK26289.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS7]
gi|387746356|gb|EIK33088.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS10]
gi|387746991|gb|EIK33707.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11a]
gi|387748374|gb|EIK35058.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11b]
gi|394330459|gb|EJE56551.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newbould 305]
gi|402347961|gb|EJU82967.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CM05]
gi|404439658|gb|AFR72851.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus 08BA02176]
gi|408423155|emb|CCJ10566.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408425145|emb|CCJ12532.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408427133|emb|CCJ14496.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408429120|emb|CCJ26285.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408431108|emb|CCJ18423.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408433102|emb|CCJ20387.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408435093|emb|CCJ22353.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408437078|emb|CCJ24321.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|421957225|gb|EKU09549.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus CN79]
gi|436431277|gb|ELP28630.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus DSM 20231]
gi|436505312|gb|ELP41236.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21282]
gi|443405001|gb|ELS63615.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21236]
gi|443405495|gb|ELS64098.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21196]
gi|445548141|gb|ELY16396.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/314250]
gi|445561343|gb|ELY17551.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/Y21]
Length = 195
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 143/180 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ AN +L + LN LS TGQ++EKI +DTDRD F++AEEAK+YGLID V++ K
Sbjct: 136 IEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETK 195
>gi|403745050|ref|ZP_10954078.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus hesperidum URH17-3-68]
gi|403121705|gb|EJY55982.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus hesperidum URH17-3-68]
Length = 193
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 137/178 (76%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G ++D++AN IVAQLL+L A DP KDI +Y+NSPGGSVTAG+
Sbjct: 16 RSYDIYSRLLKDRIVLLGTAIDDNVANAIVAQLLFLAADDPEKDIQLYINSPGGSVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HIRP VST+CVG+AASMGAFLL+AG KGKRY+LPN+ IMIHQPLGG QG SD
Sbjct: 76 AIYDTIQHIRPAVSTMCVGMAASMGAFLLAAGEKGKRYALPNAEIMIHQPLGGVQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
I + A ML K LN L+ TGQ LE I DTDRD FMSA+EAK YGLID V+ P
Sbjct: 136 IQIHAEWMLKTKDKLNRLLAERTGQPLEVIERDTDRDNFMSADEAKAYGLIDEVLGTP 193
>gi|335424989|ref|ZP_08553980.1| ATP-dependent Clp protease proteolytic subunit ClpP [Salinisphaera
shabanensis E1L3A]
gi|334886665|gb|EGM25012.1| ATP-dependent Clp protease proteolytic subunit ClpP [Salinisphaera
shabanensis E1L3A]
Length = 210
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 103/172 (59%), Positives = 141/172 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I C GPV+D MAN+IVAQLL+L++ +P+KDI +Y+NSPGG +TAGM+I+
Sbjct: 24 DIYSRLLKERVIFCVGPVDDQMANLIVAQLLFLESDNPDKDIQLYINSPGGVITAGMSIY 83
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDV+T+C+G AASMGA LL+ G GKRY+LPNSR+MIHQPLGG QG +DI++
Sbjct: 84 DTMQFIKPDVATMCLGQAASMGAVLLAGGAHGKRYALPNSRVMIHQPLGGFQGQATDIEI 143
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+LH + LN L++HTGQ L+KI DT+RDFFMSA+ A DYG+ID V+
Sbjct: 144 HAREILHARERLNEVLAHHTGQPLDKIKHDTERDFFMSAQAATDYGVIDDVL 195
>gi|310639654|ref|YP_003944412.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|386038858|ref|YP_005957812.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
gi|309244604|gb|ADO54171.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|343094896|emb|CCC83105.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
Length = 198
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D +AN I+AQ+L+L A DP KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT+++I+PDVST+CVG+AASMGAFLL+AG KGKR++LPNS IMIHQPLGGAQG +D
Sbjct: 76 AIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGAQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I+++A +L + LN L+ TGQ LE+I +DTDRD+FMSA++AK+YG+ID V+
Sbjct: 136 IEIRARRILKMRDKLNRILADRTGQPLERIEKDTDRDYFMSADDAKEYGIIDKVL 190
>gi|282850557|ref|ZP_06259936.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
parvula ATCC 17745]
gi|294792182|ref|ZP_06757330.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 6_1_27]
gi|294794047|ref|ZP_06759184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 3_1_44]
gi|417001079|ref|ZP_11940993.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella parvula ACS-068-V-Sch12]
gi|282580050|gb|EFB85454.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
parvula ATCC 17745]
gi|294455617|gb|EFG23989.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 3_1_44]
gi|294457412|gb|EFG25774.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 6_1_27]
gi|333975562|gb|EGL76441.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella parvula ACS-068-V-Sch12]
Length = 197
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/196 (56%), Positives = 151/196 (77%), Gaps = 9/196 (4%)
Query: 91 YIPTYA-QGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAV 149
Y+P QGE+G R ++ S+L + RII GGP++D++AN ++AQ+L+L+A
Sbjct: 2 YVPIVVEQGERGE--------RSYDIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAE 53
Query: 150 DPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS 209
DP+KDI +Y+NSPGG VTAGMAI+DT+++I+PDVST+CVG AASMGA LL+AGTKGKRY+
Sbjct: 54 DPDKDIHLYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGTKGKRYA 113
Query: 210 LPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFF 269
LP++RIMIHQPLGG QG S+I++ A E+L + LNG L+ +GQ +E + DTDRD F
Sbjct: 114 LPHARIMIHQPLGGVQGQASEIEIHAREILRMREELNGILASRSGQDIEVVARDTDRDNF 173
Query: 270 MSAEEAKDYGLIDGVV 285
MSA++A +YGLID V+
Sbjct: 174 MSAQDAVEYGLIDEVL 189
>gi|33862212|ref|NP_893773.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|67460514|sp|Q7UZK7.1|CLPP3_PROMP RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|33634430|emb|CAE20115.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 215
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/174 (61%), Positives = 139/174 (79%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G + D +++ +VAQLL+L+A DP+KDI +Y+NSPGGSVTAG+AI+
Sbjct: 40 DIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPHKDIQIYINSPGGSVTAGLAIY 99
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I PDV T+C G+AASMGAFLLS G KGKR +LPNSRIMIHQPLGGAQG +I++
Sbjct: 100 DTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGAQGQAVEIEI 159
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
QA E+L K LN L+ HT Q+LEKINEDT+RD+F+S EEA +YGLID V+ N
Sbjct: 160 QAKEILFLKKTLNSLLAKHTNQSLEKINEDTERDYFLSPEEAVEYGLIDKVIKN 213
>gi|410452503|ref|ZP_11306492.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
bataviensis LMG 21833]
gi|409934548|gb|EKN71433.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
bataviensis LMG 21833]
Length = 201
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 142/179 (79%), Gaps = 1/179 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D+++N IVAQLL+L+A +P KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIMLGSAIDDNVSNSIVAQLLFLEAENPEKDITLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+ DVSTVC+G+AASMGAFLL+AG KGKRY+LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTMQYIKADVSTVCIGMAASMGAFLLAAGEKGKRYALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVM-NP 288
I++ A +L + LNG LS TGQ LE I DTDRD FM+AE AK+YGLID +V NP
Sbjct: 136 IEIAAKRILFLREKLNGILSERTGQPLEVIQRDTDRDNFMTAERAKEYGLIDNIVTRNP 194
>gi|223040072|ref|ZP_03610353.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
rectus RM3267]
gi|222878658|gb|EEF13758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
rectus RM3267]
Length = 196
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 141/180 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G +ED +A+ IVAQ+L+L+A DP+KDI +Y+NSPGG +T+G
Sbjct: 17 RSYDIYSRLLKDRIIMLSGEIEDGIASAIVAQMLFLEAEDPDKDIYLYINSPGGVITSGF 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ +I+PDV T+C+G AASMGAFLLS G +GKRY+LPNSRIMIHQPLGGA+G +D
Sbjct: 77 SIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAQGKRYALPNSRIMIHQPLGGARGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L K LN L+ +TGQ L KI +DTDRDFFMS+ EAK+YGLID V+ K
Sbjct: 137 IEIQAKEILRMKEILNAILAKNTGQKLAKIQKDTDRDFFMSSAEAKEYGLIDKVLEKSFK 196
>gi|359447956|ref|ZP_09237512.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20480]
gi|392538775|ref|ZP_10285912.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
marina mano4]
gi|358046180|dbj|GAA73761.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20480]
Length = 205
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 141/180 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED+MAN+I+AQ+L+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKERIIFLTGQVEDNMANLILAQMLFLESENPDKDIFLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDVST+CVG AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 85 AIYDTMNFIKPDVSTICVGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
++ A E+L K LN ++ HTGQ L+ I++DTDRD FMSA EA +YGL+D V N K
Sbjct: 145 FEIHAKEILSIKDKLNRLMAEHTGQPLDVISKDTDRDNFMSASEAVEYGLVDSVFANRDK 204
>gi|448747538|ref|ZP_21729195.1| Peptidase S14/S49 [Halomonas titanicae BH1]
gi|445564818|gb|ELY20933.1| Peptidase S14/S49 [Halomonas titanicae BH1]
Length = 205
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/193 (56%), Positives = 147/193 (76%), Gaps = 6/193 (3%)
Query: 99 EQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPN 152
+ GG PM++ R ++ S+L + R+I GPVED MAN++VAQLL+L++ +P+
Sbjct: 7 QNAGGLVPMVVEQSAKGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLESENPD 66
Query: 153 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 212
KDI +Y+NSPGGSVTAGM+I+DT++ ++PDVSTVC+G AASMGA LL+AG GKRY LPN
Sbjct: 67 KDIHLYINSPGGSVTAGMSIYDTMQFVKPDVSTVCIGQAASMGALLLTAGAAGKRYCLPN 126
Query: 213 SRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSA 272
SR+MIHQPLGG QG SDI++ E+L + LN L++HTGQ +E ++ DTDRD FMSA
Sbjct: 127 SRVMIHQPLGGYQGQASDIEIHTREILGIREKLNQILAHHTGQEIEAVSRDTDRDNFMSA 186
Query: 273 EEAKDYGLIDGVV 285
+AK+YGLID V+
Sbjct: 187 NQAKEYGLIDAVL 199
>gi|358051444|ref|ZP_09145643.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simiae CCM 7213]
gi|357259050|gb|EHJ08908.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simiae CCM 7213]
Length = 194
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 142/176 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVM 286
I++ AN +L + LN LS TGQ++EKI +DTDRD F++AEEAK+YGLID V++
Sbjct: 136 IEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAEEAKEYGLIDEVMV 191
>gi|94264491|ref|ZP_01288278.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
gi|94266601|ref|ZP_01290283.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
gi|93452772|gb|EAT03310.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
gi|93455050|gb|EAT05277.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
Length = 200
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 143/177 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D++AN+++AQ+L+L+A DP+KDI Y+NSPGGSVTAG+
Sbjct: 16 RSYDIYSRLLKERIIFLGTGVNDEVANVVIAQMLFLEADDPDKDITFYINSPGGSVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+R+++ D++T+C+G AASMGA LL+AGTKGKRY+LPN+RI+IHQP+GG QG SD
Sbjct: 76 AIYDTMRYVKCDIATLCLGQAASMGAVLLAAGTKGKRYALPNARILIHQPMGGFQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
ID+ A E+L + LN L+ HTGQ L+KI DT+RD+FMS+EEAK YGLID V++
Sbjct: 136 IDIHAREILRMRQGLNKMLADHTGQKLKKIQTDTERDYFMSSEEAKTYGLIDKVLLE 192
>gi|417842395|ref|ZP_12488486.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M19501]
gi|341947267|gb|EGT73935.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M19501]
Length = 193
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 140/177 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L++ DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDINIYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PD+ T+C+G A SMGAFLL+ GT GKR +LPN+R+MIHQPLGG +G SD
Sbjct: 76 AIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVMIHQPLGGFRGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I + A E+L K LN L++HTGQ++E+I +DTDRD FMSAEEAK YGL+D V++
Sbjct: 136 IQIHAQEILKIKQTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEAKAYGLVDEVLIK 192
>gi|345531825|pdb|3ST9|A Chain A, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531826|pdb|3ST9|B Chain B, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531827|pdb|3ST9|C Chain C, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531828|pdb|3ST9|D Chain D, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531829|pdb|3ST9|E Chain E, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531830|pdb|3ST9|F Chain F, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531831|pdb|3ST9|G Chain G, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531832|pdb|3STA|V Chain V, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531833|pdb|3STA|A Chain A, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531834|pdb|3STA|B Chain B, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531835|pdb|3STA|C Chain C, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531836|pdb|3STA|E Chain E, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531837|pdb|3STA|F Chain F, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531838|pdb|3STA|G Chain G, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531839|pdb|3STA|I Chain I, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531840|pdb|3STA|K Chain K, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531841|pdb|3STA|L Chain L, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531842|pdb|3STA|M Chain M, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531843|pdb|3STA|N Chain N, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531844|pdb|3STA|S Chain S, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531845|pdb|3STA|T Chain T, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
Length = 197
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 143/180 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 18 RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 77
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 78 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 137
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ AN +L + LN LS TGQ++EKI +DTDRD F++AEEAK+YGLID V++ K
Sbjct: 138 IEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETK 197
>gi|334339586|ref|YP_004544566.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfotomaculum ruminis DSM 2154]
gi|334090940|gb|AEG59280.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum ruminis DSM 2154]
Length = 195
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP+ED +AN+++AQ L+L+A DP KDI +Y+NSPGG VTAGM
Sbjct: 17 RAYDIYSRLLKDRIIFIGGPIEDHIANLVIAQFLFLEAEDPEKDIHLYINSPGGVVTAGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+ VST+C+G AASMG+FLL+AGTKGKRYSLP +RIMIHQ LGG QG +D
Sbjct: 77 AIYDTMQYIKCPVSTICLGQAASMGSFLLAAGTKGKRYSLPYARIMIHQVLGGVQGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
ID+ A E+L K LN LS+HTGQ L+KI DT+RDFFMSAE AK+YG+ID V+
Sbjct: 137 IDIHAKEILRIKEVLNERLSHHTGQPLDKIARDTERDFFMSAEAAKEYGIIDEVM 191
>gi|110834071|ref|YP_692930.1| ATP-dependent Clp protease, proteolytic subunitclpp [Alcanivorax
borkumensis SK2]
gi|110647182|emb|CAL16658.1| ATP-dependent Clp protease, proteolytic subunitClpP [Alcanivorax
borkumensis SK2]
Length = 218
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 104/172 (60%), Positives = 143/172 (83%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L++ +P+KDI +Y+NSPGGSVTAGM+I+
Sbjct: 42 DIYSRLLKERVIFMIGQVEDHMANLIVAQMLFLESENPDKDIHLYINSPGGSVTAGMSIY 101
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG GKR++LPN+R+MIHQPLGG QG SDI++
Sbjct: 102 DTMQFIKPDVSTMCIGQAASMGAFLLTAGAAGKRFALPNARVMIHQPLGGFQGQASDIEI 161
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K LN L++HTGQ +E++ +DTDRD FMSA+EAK+YG+ID V+
Sbjct: 162 HAKEILKIKGQLNSLLAHHTGQPIEQLEKDTDRDNFMSADEAKEYGIIDAVL 213
>gi|90417350|ref|ZP_01225275.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium HTCC2207]
gi|90330792|gb|EAS46061.1| ATP-dependent Clp protease, proteolytic subunit ClpP [marine gamma
proteobacterium HTCC2207]
Length = 213
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 149/192 (77%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
Q G PM++ R ++ S+L + R+I G VED MAN+IVAQ+L+L++ +P+K
Sbjct: 15 QASGLVPMVVEQTSRGERAYDIYSRLLKERVIFLVGQVEDHMANLIVAQMLFLESENPDK 74
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI +Y+NSPGGSVTAGM+I+DT++ I+P+VST+C+G AASMGAFLL+AG +GKRY LPNS
Sbjct: 75 DIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTMCIGQAASMGAFLLAAGAEGKRYCLPNS 134
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
R MIHQP GGAQG +DI +Q+ E+L K+ LN ++ HTGQ++EK+ EDT+RD FMSAE
Sbjct: 135 RTMIHQPSGGAQGQATDIHIQSQEILKIKSRLNNLMAKHTGQSVEKVTEDTERDNFMSAE 194
Query: 274 EAKDYGLIDGVV 285
E+K YGL+D V+
Sbjct: 195 ESKAYGLVDDVL 206
>gi|134300401|ref|YP_001113897.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
reducens MI-1]
gi|172044337|sp|A4J7L9.1|CLPP_DESRM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134053101|gb|ABO51072.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfotomaculum reducens MI-1]
Length = 195
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP++D +AN+++AQ L+L+A DP KDI +Y+NSPGG VTAG+
Sbjct: 17 RAYDIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDIHLYINSPGGVVTAGL 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+P VST+C+G AASMG+FLL+AG GKRY+LP +RIMIHQPLGG QG +D
Sbjct: 77 AIYDTMQYIKPAVSTICLGQAASMGSFLLAAGAPGKRYALPMARIMIHQPLGGVQGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
ID+ A E+L K LN L++HTGQ LE+I DT+RD+FMSAEEAK YGLID V+
Sbjct: 137 IDIHAKEILRMKDLLNDRLAHHTGQPLEQITRDTERDYFMSAEEAKKYGLIDEVM 191
>gi|254432364|ref|ZP_05046067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
gi|197626817|gb|EDY39376.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
Length = 235
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/175 (62%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D +A+ +VAQLL+L+A DP KDI +Y+NSPGGSVTAG+
Sbjct: 50 RAFDIYSRLLRERIIFLGTGIDDAVADALVAQLLFLEAEDPEKDIQIYINSPGGSVTAGL 109
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ + PDV T+C GLAASMGAFLLS GTKGKR +LP++RIMIHQPLGGAQG D
Sbjct: 110 AIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPSARIMIHQPLGGAQGQAVD 169
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L K LNG ++ HTGQ LEKI EDTDRD+F+S EA DYGLID VV
Sbjct: 170 IEIQAKEILFLKDTLNGLMAEHTGQPLEKIAEDTDRDYFLSPAEAVDYGLIDRVV 224
>gi|418911445|ref|ZP_13465428.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG547]
gi|377724823|gb|EHT48938.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG547]
Length = 195
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 142/176 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVM 286
I++ AN +L + LN LS TGQ++EKI +DTDRD F++AEEAK+YGLID V++
Sbjct: 136 IEIAANHILKTREKLNHILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMV 191
>gi|402699101|ref|ZP_10847080.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas fragi
A22]
Length = 213
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 113/200 (56%), Positives = 148/200 (74%), Gaps = 6/200 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + RII GPVED MAN++ AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERSYDIYSRLLKERIIFLVGPVEDYMANLVAAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G A SMGAFLL+ G
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAGGAP 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKR+ LPNSR+MIHQPLGG QG SDID+ A E+L+ + LN L++HTGQ+LE I DT
Sbjct: 126 GKRHCLPNSRMMIHQPLGGFQGQASDIDIHAKEILNIRHRLNSLLAHHTGQSLETIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGV 284
+RD FMSAE A +YGLID V
Sbjct: 186 ERDNFMSAERATEYGLIDSV 205
>gi|359434423|ref|ZP_09224688.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20652]
gi|357918931|dbj|GAA60937.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20652]
Length = 205
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 141/180 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED+MAN+I+AQ+L+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKERIIFLTGQVEDNMANLILAQMLFLESENPDKDIFLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDVST+CVG AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 85 AIYDTMNFIKPDVSTICVGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
++ A E+L K LN ++ HTGQ L+ I++DTDRD FMSA +A DYGL+D V N K
Sbjct: 145 FEIHAREILSIKDKLNRLMAEHTGQPLDIISKDTDRDNFMSASQAVDYGLVDSVFTNRDK 204
>gi|365154330|ref|ZP_09350763.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter sp.
10_1_50]
gi|363650168|gb|EHL89259.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter sp.
10_1_50]
Length = 196
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 141/180 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G +ED MA IVAQLL+L+A DP+KDI +Y+NSPGG +T+G
Sbjct: 17 RSYDIYSRLLKDRIVMLSGEIEDGMAASIVAQLLFLEAEDPDKDIYLYINSPGGVITSGF 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ +I+PDV T+C+G AASMGAFLLS GT GKRY+LPNSRIMIHQPLGGA+G +D
Sbjct: 77 SIYDTMNYIKPDVCTICIGQAASMGAFLLSCGTPGKRYALPNSRIMIHQPLGGARGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L K LNG L+ +TGQ L KI +DT+RDFFMS+ EAK+YGL+D ++ K
Sbjct: 137 IEIQAREILRLKEILNGILAKNTGQKLSKIVKDTERDFFMSSAEAKEYGLVDKILEKSFK 196
>gi|116243127|sp|Q0VQ90.2|CLPP_ALCBS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 205
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 104/172 (60%), Positives = 143/172 (83%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L++ +P+KDI +Y+NSPGGSVTAGM+I+
Sbjct: 29 DIYSRLLKERVIFMIGQVEDHMANLIVAQMLFLESENPDKDIHLYINSPGGSVTAGMSIY 88
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG GKR++LPN+R+MIHQPLGG QG SDI++
Sbjct: 89 DTMQFIKPDVSTMCIGQAASMGAFLLTAGAAGKRFALPNARVMIHQPLGGFQGQASDIEI 148
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K LN L++HTGQ +E++ +DTDRD FMSA+EAK+YG+ID V+
Sbjct: 149 HAKEILKIKGQLNSLLAHHTGQPIEQLEKDTDRDNFMSADEAKEYGIIDAVL 200
>gi|108762291|ref|YP_630243.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus xanthus
DK 1622]
gi|338533213|ref|YP_004666547.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
gi|116270726|sp|Q1DAT0.1|CLPP1_MYXXD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|108466171|gb|ABF91356.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Myxococcus
xanthus DK 1622]
gi|337259309|gb|AEI65469.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
Length = 206
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 146/182 (80%), Gaps = 1/182 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G ++DD+AN+IVAQLL+L++ DP+KDI +Y+NSPGGSVTAG+
Sbjct: 18 RSYDIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPGGSVTAGL 77
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++++ VST+CVG AASMGA LL AG KGKRY+LP+SRIMIHQPLGG +G +D
Sbjct: 78 AIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQPLGGVRGQATD 137
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L KA LN + HTGQ++E++ +DTDRD+FM A EAK YG+ID + NP K
Sbjct: 138 IEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMGASEAKAYGIIDE-IQNPRK 196
Query: 291 IL 292
++
Sbjct: 197 VV 198
>gi|254423153|ref|ZP_05036871.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7335]
gi|196190642|gb|EDX85606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7335]
Length = 201
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D N+IVAQ+L+L+A DP KDI +Y+NSPGGSV+AG+
Sbjct: 14 RAFDIYSRLLRERIIFLHGQVTADSMNLIVAQMLFLEAEDPEKDIYLYINSPGGSVSAGL 73
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
++DT+ HIRPDV+T+C+GLAASMGAFLLSAG KGKR LPN R+MIHQP GGAQG +D
Sbjct: 74 GLYDTMNHIRPDVATICMGLAASMGAFLLSAGAKGKRMILPNGRVMIHQPSGGAQGQATD 133
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN L+ HTGQ LEKI EDT+RDFFMS +EA +YGL+D V+
Sbjct: 134 IEIQAKEILYLKTMLNEALAKHTGQPLEKIKEDTERDFFMSPQEAMEYGLVDQVI 188
>gi|158522703|ref|YP_001530573.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfococcus
oleovorans Hxd3]
gi|259585950|sp|A8ZXB7.1|CLPP_DESOH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|158511529|gb|ABW68496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfococcus
oleovorans Hxd3]
Length = 205
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 143/177 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G ++D+ AN+++AQLL+L++ DP+KDI Y+NSPGG V+AGM
Sbjct: 16 RAFDIYSRLLKDRIVFIGSAIDDETANLLIAQLLFLESEDPDKDINFYINSPGGKVSAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+ D++TVC+G AASMGAFLL+AG KGKR+SLPNSRIMIHQP+GGAQG SD
Sbjct: 76 AIYDTMQYIKSDIATVCIGHAASMGAFLLAAGAKGKRFSLPNSRIMIHQPMGGAQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I +QA E+L K LN L++HTG+ LE+I DTDRDFFMS EEAK YG++D V+ +
Sbjct: 136 IAIQAKEILRMKDILNQILAHHTGKPLEQIQVDTDRDFFMSGEEAKAYGIVDHVITD 192
>gi|118594831|ref|ZP_01552178.1| Peptidase S14, ClpP [Methylophilales bacterium HTCC2181]
gi|118440609|gb|EAV47236.1| Peptidase S14, ClpP [Methylophilales bacterium HTCC2181]
Length = 209
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/195 (55%), Positives = 150/195 (76%), Gaps = 7/195 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
YIP + + G G R ++ S+L + R++ GPV+D AN++VAQLL+L+A +
Sbjct: 15 YIPMVVE-QSGRGE------RSYDIYSRLLKERVVFLVGPVDDMTANVVVAQLLFLEAEN 67
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P+KDI +Y+NSPGGSVTAGMAI+DT++ I+PD+ST+C+G AASMGA LL+AG KR+SL
Sbjct: 68 PDKDISLYINSPGGSVTAGMAIYDTMQFIKPDISTLCIGQAASMGALLLTAGAAKKRFSL 127
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
PNSR+MIHQPLGG QG SDI++ A E+L+ K LN ++ H+GQ+LEK+++DTDRD FM
Sbjct: 128 PNSRVMIHQPLGGFQGQASDIEIHAKEILYLKEKLNKIMAEHSGQSLEKVSKDTDRDNFM 187
Query: 271 SAEEAKDYGLIDGVV 285
SA++A +YGLID V+
Sbjct: 188 SAKDAMEYGLIDKVI 202
>gi|85713354|ref|ZP_01044368.1| Protease subunit of ATP-dependent Clp protease [Idiomarina baltica
OS145]
gi|85692821|gb|EAQ30805.1| Protease subunit of ATP-dependent Clp protease [Idiomarina baltica
OS145]
Length = 205
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 111/204 (54%), Positives = 148/204 (72%), Gaps = 7/204 (3%)
Query: 82 NDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVA 141
ND++ P + +P + G R ++ S+L + R+I C G VED MAN+IVA
Sbjct: 3 NDIQDPMAQLVPMVVEQTSKGE-------RSYDIYSRLLKERVIFCCGQVEDHMANLIVA 55
Query: 142 QLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSA 201
QLL+L++ +P+KDI +Y+NSPGG VTAGMAI+DT+R I+PDVSTVC+G AASMGAFLL+
Sbjct: 56 QLLFLESDNPDKDIYLYINSPGGVVTAGMAIYDTMRFIKPDVSTVCMGQAASMGAFLLAG 115
Query: 202 GTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKIN 261
G +GKRY LPNSR+MIHQPLGG QG SD ++ A ++L K LN L+ +TGQ EK+
Sbjct: 116 GAQGKRYCLPNSRVMIHQPLGGFQGQASDFEIHAKQILDLKERLNRMLAENTGQDYEKVA 175
Query: 262 EDTDRDFFMSAEEAKDYGLIDGVV 285
DTDRD F++A EA DYGL+DG++
Sbjct: 176 RDTDRDHFLTAPEAVDYGLVDGIL 199
>gi|154175235|ref|YP_001407437.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
curvus 525.92]
gi|402546507|ref|ZP_10843382.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Campylobacter sp. FOBRC14]
gi|112803266|gb|EAU00610.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
curvus 525.92]
gi|401017320|gb|EJP76081.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Campylobacter sp. FOBRC14]
Length = 196
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/180 (60%), Positives = 139/180 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G +ED MA IVAQLL+L+A DP KDI +Y+NSPGG +T+G
Sbjct: 17 RSYDIYSRLLKDRIVMLSGEIEDGMAASIVAQLLFLEAEDPEKDIYLYINSPGGVITSGF 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+IFDT+ +I+PDV T+C+G AASMGAFLLS G GKRY+LPNSRIMIHQPLGGA+G SD
Sbjct: 77 SIFDTMNYIKPDVCTICIGQAASMGAFLLSCGAPGKRYALPNSRIMIHQPLGGARGQASD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L K LNG L+ +TGQ L KI +DT+RDFFMS+ EAK+YGLID ++ K
Sbjct: 137 IEIQAREILRLKEILNGILAKNTGQKLNKIVKDTERDFFMSSHEAKEYGLIDKILEKSFK 196
>gi|260584984|ref|ZP_05852727.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Granulicatella elegans ATCC 700633]
gi|260157290|gb|EEW92363.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Granulicatella elegans ATCC 700633]
Length = 197
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 139/177 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GP+ DDMAN I+AQLL+LDA DP KDI MY+NSPGGSVTAG+
Sbjct: 16 RAYDIYSRLLKDRIIMVSGPIHDDMANAIIAQLLFLDAQDPEKDIYMYINSPGGSVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+ DV T+ +GLAASMG+FLL+AGTKGKRY+LPN+ I+IHQPLGGAQG ++
Sbjct: 76 AIYDTMNFIKADVQTIAMGLAASMGSFLLTAGTKGKRYALPNAEILIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++ A ++L + LN L+ TGQ L+ I +DTDRD +M+A+EA +YGLID ++ N
Sbjct: 136 IEIAARQILKTRERLNAILAKQTGQKLKTIEKDTDRDNYMTAQEALEYGLIDAIMTN 192
>gi|53719039|ref|YP_108025.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei K96243]
gi|121601387|ref|YP_993274.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia mallei
SAVP1]
gi|124386617|ref|YP_001029282.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia mallei
NCTC 10229]
gi|126440189|ref|YP_001059356.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 668]
gi|126450257|ref|YP_001080784.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia mallei
NCTC 10247]
gi|126451473|ref|YP_001066627.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1106a]
gi|134277993|ref|ZP_01764708.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 305]
gi|217421679|ref|ZP_03453183.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 576]
gi|226197408|ref|ZP_03792985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei Pakistan 9]
gi|237812684|ref|YP_002897135.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei MSHR346]
gi|238562204|ref|ZP_00440781.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei GB8 horse 4]
gi|242317499|ref|ZP_04816515.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1106b]
gi|251766649|ref|ZP_02264557.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei PRL-20]
gi|254178458|ref|ZP_04885113.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei ATCC 10399]
gi|254189184|ref|ZP_04895695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei Pasteur 52237]
gi|254206398|ref|ZP_04912750.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei JHU]
gi|254258354|ref|ZP_04949408.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1710a]
gi|254297312|ref|ZP_04964765.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 406e]
gi|254358192|ref|ZP_04974465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei 2002721280]
gi|386861423|ref|YP_006274372.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1026b]
gi|403519055|ref|YP_006653189.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei BPC006]
gi|418382821|ref|ZP_12966747.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 354a]
gi|418533694|ref|ZP_13099553.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1026a]
gi|418540564|ref|ZP_13106094.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1258a]
gi|418546808|ref|ZP_13111999.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1258b]
gi|418553028|ref|ZP_13117869.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 354e]
gi|67460243|sp|Q63V41.1|CLPP_BURPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201803|sp|A3MKJ8.1|CLPP_BURM7 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201804|sp|A2SBG3.1|CLPP_BURM9 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201805|sp|A1V4X1.1|CLPP_BURMS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201806|sp|A3NWA6.1|CLPP_BURP0 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201807|sp|A3NAI5.1|CLPP_BURP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|52209453|emb|CAH35404.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei K96243]
gi|121230197|gb|ABM52715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei SAVP1]
gi|124294637|gb|ABN03906.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei NCTC 10229]
gi|126219682|gb|ABN83188.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 668]
gi|126225115|gb|ABN88655.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1106a]
gi|126243127|gb|ABO06220.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei NCTC 10247]
gi|134251643|gb|EBA51722.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 305]
gi|147753841|gb|EDK60906.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei JHU]
gi|148027319|gb|EDK85340.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei 2002721280]
gi|157807201|gb|EDO84371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 406e]
gi|157936863|gb|EDO92533.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei Pasteur 52237]
gi|160699497|gb|EDP89467.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei ATCC 10399]
gi|217395421|gb|EEC35439.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 576]
gi|225930787|gb|EEH26797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei Pakistan 9]
gi|237504658|gb|ACQ96976.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei MSHR346]
gi|238523066|gb|EEP86507.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei GB8 horse 4]
gi|242140738|gb|EES27140.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1106b]
gi|243065058|gb|EES47244.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei PRL-20]
gi|254217043|gb|EET06427.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1710a]
gi|385360654|gb|EIF66568.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1026a]
gi|385361174|gb|EIF67066.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1258a]
gi|385362934|gb|EIF68724.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1258b]
gi|385372144|gb|EIF77269.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 354e]
gi|385376976|gb|EIF81604.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 354a]
gi|385658551|gb|AFI65974.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1026b]
gi|403074698|gb|AFR16278.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei BPC006]
Length = 217
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 144/174 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 39 RSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 98
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ ++PDVST+C+GLAASMGAFLL++G KGKRY+LPN+R+MIHQPLGGA+G SD
Sbjct: 99 AIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASD 158
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++QA E+L+ + LN L++HTGQ +E+I DTDRD FMS+E+AK YGLID V
Sbjct: 159 IEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 212
>gi|256544468|ref|ZP_05471841.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerococcus
vaginalis ATCC 51170]
gi|256399793|gb|EEU13397.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerococcus
vaginalis ATCC 51170]
Length = 195
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GPVED +++II+AQLL+L++ DPNKDI Y+NSPGG VTAG+
Sbjct: 20 RAYDIYSRLLKDRIIFLTGPVEDGVSDIIIAQLLFLESQDPNKDIQFYINSPGGVVTAGL 79
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ +I+PDVST+C+G AASMGA LLS+G KGKR+SLPNS I+IHQP GGAQG SD
Sbjct: 80 AIYDTMNYIKPDVSTICIGQAASMGAVLLSSGAKGKRFSLPNSNILIHQPSGGAQGQASD 139
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I +QA ++L K LN L+ +TGQ++EKI +DTDRDF M A EAK+YGLID V+
Sbjct: 140 IQIQAEQILKMKKRLNKILADNTGQSIEKIQKDTDRDFAMDAYEAKEYGLIDKVI 194
>gi|27467469|ref|NP_764106.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis ATCC 12228]
gi|57866412|ref|YP_188029.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis RP62A]
gi|242242138|ref|ZP_04796583.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis W23144]
gi|251810202|ref|ZP_04824675.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BCM-HMP0060]
gi|282875651|ref|ZP_06284522.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis SK135]
gi|293368230|ref|ZP_06614859.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W2(grey)]
gi|416124873|ref|ZP_11595668.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis FRI909]
gi|417647658|ref|ZP_12297492.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU144]
gi|417656247|ref|ZP_12305934.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU028]
gi|417658376|ref|ZP_12308010.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU045]
gi|417910192|ref|ZP_12553919.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU037]
gi|417911815|ref|ZP_12555515.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU105]
gi|417914206|ref|ZP_12557859.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU109]
gi|418326030|ref|ZP_12937226.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU071]
gi|418329732|ref|ZP_12940785.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis 14.1.R1.SE]
gi|418411293|ref|ZP_12984561.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BVS058A4]
gi|418604876|ref|ZP_13168211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU041]
gi|418608483|ref|ZP_13171678.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU057]
gi|418608689|ref|ZP_13171871.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU065]
gi|418611518|ref|ZP_13174598.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU117]
gi|418614099|ref|ZP_13177086.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU118]
gi|418618003|ref|ZP_13180887.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU120]
gi|418622588|ref|ZP_13185333.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU123]
gi|418623648|ref|ZP_13186350.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU125]
gi|418626020|ref|ZP_13188648.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU126]
gi|418629665|ref|ZP_13192161.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU127]
gi|418633713|ref|ZP_13196119.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU129]
gi|418665858|ref|ZP_13227295.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU081]
gi|419768236|ref|ZP_14294368.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-250]
gi|419771145|ref|ZP_14297205.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-K]
gi|420162870|ref|ZP_14669625.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM095]
gi|420166724|ref|ZP_14673405.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM088]
gi|420167312|ref|ZP_14673973.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM087]
gi|420171404|ref|ZP_14677946.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM070]
gi|420172098|ref|ZP_14678613.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM067]
gi|420175404|ref|ZP_14681842.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM061]
gi|420176672|ref|ZP_14683079.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM057]
gi|420180409|ref|ZP_14686641.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM053]
gi|420182492|ref|ZP_14688628.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM049]
gi|420185937|ref|ZP_14692013.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM040]
gi|420187913|ref|ZP_14693928.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM039]
gi|420189984|ref|ZP_14695932.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM037]
gi|420193132|ref|ZP_14698987.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM023]
gi|420195431|ref|ZP_14701223.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM021]
gi|420197784|ref|ZP_14703505.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM020]
gi|420199727|ref|ZP_14705398.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM031]
gi|420201234|ref|ZP_14706859.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM018]
gi|420203772|ref|ZP_14709333.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM015]
gi|420206801|ref|ZP_14712306.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM008]
gi|420208208|ref|ZP_14713678.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM003]
gi|420212385|ref|ZP_14717736.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM001]
gi|420213579|ref|ZP_14718885.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05005]
gi|420216619|ref|ZP_14721823.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05001]
gi|420219555|ref|ZP_14724570.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04008]
gi|420222322|ref|ZP_14727243.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH08001]
gi|420225248|ref|ZP_14730082.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH06004]
gi|420226678|ref|ZP_14731457.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05003]
gi|420228998|ref|ZP_14733709.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04003]
gi|420231355|ref|ZP_14736007.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051668]
gi|420233994|ref|ZP_14738568.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051475]
gi|421607631|ref|ZP_16048869.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis AU12-03]
gi|38257586|sp|Q8CTE0.1|CLPP_STAES RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460168|sp|Q5HQW0.1|CLPP_STAEQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|27315012|gb|AAO04148.1|AE016745_247 ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis ATCC 12228]
gi|57637070|gb|AAW53858.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis RP62A]
gi|242234451|gb|EES36763.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis W23144]
gi|251806254|gb|EES58911.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BCM-HMP0060]
gi|281295678|gb|EFA88201.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis SK135]
gi|291317653|gb|EFE58070.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W2(grey)]
gi|319401155|gb|EFV89370.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis FRI909]
gi|329723271|gb|EGG59801.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU144]
gi|329736698|gb|EGG72963.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU028]
gi|329738003|gb|EGG74227.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU045]
gi|341651029|gb|EGS74836.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU037]
gi|341652326|gb|EGS76115.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU105]
gi|341653290|gb|EGS77061.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU109]
gi|365226941|gb|EHM68152.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU071]
gi|365229855|gb|EHM70983.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis 14.1.R1.SE]
gi|374401382|gb|EHQ72456.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU057]
gi|374403769|gb|EHQ74765.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU041]
gi|374407975|gb|EHQ78819.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU081]
gi|374409868|gb|EHQ80637.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU065]
gi|374817066|gb|EHR81256.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU120]
gi|374821672|gb|EHR85724.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU118]
gi|374822416|gb|EHR86438.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU117]
gi|374826344|gb|EHR90243.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU123]
gi|374829958|gb|EHR93749.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU125]
gi|374833196|gb|EHR96891.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU127]
gi|374834043|gb|EHR97705.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU126]
gi|374838660|gb|EHS02198.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU129]
gi|383360447|gb|EID37843.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-250]
gi|383362116|gb|EID39473.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-K]
gi|394233097|gb|EJD78707.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM088]
gi|394235867|gb|EJD81417.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM095]
gi|394238050|gb|EJD83534.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM070]
gi|394238941|gb|EJD84398.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM087]
gi|394243339|gb|EJD88705.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM061]
gi|394243569|gb|EJD88931.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM067]
gi|394250037|gb|EJD95239.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM049]
gi|394250752|gb|EJD95922.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM053]
gi|394252238|gb|EJD97276.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM057]
gi|394253029|gb|EJD98045.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM040]
gi|394255555|gb|EJE00504.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM039]
gi|394259277|gb|EJE04135.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM037]
gi|394260255|gb|EJE05070.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM023]
gi|394263226|gb|EJE07965.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM021]
gi|394265370|gb|EJE10027.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM020]
gi|394271477|gb|EJE15970.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM031]
gi|394273140|gb|EJE17575.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM018]
gi|394274354|gb|EJE18775.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM015]
gi|394276904|gb|EJE21237.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM008]
gi|394279819|gb|EJE24116.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM001]
gi|394282082|gb|EJE26294.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM003]
gi|394285155|gb|EJE29239.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05005]
gi|394288813|gb|EJE32713.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04008]
gi|394289374|gb|EJE33258.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH08001]
gi|394291646|gb|EJE35441.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05001]
gi|394293803|gb|EJE37505.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH06004]
gi|394298294|gb|EJE41871.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05003]
gi|394299681|gb|EJE43216.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04003]
gi|394302921|gb|EJE46355.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051668]
gi|394304687|gb|EJE48083.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051475]
gi|406656682|gb|EKC83083.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis AU12-03]
gi|410892837|gb|EKS40628.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BVS058A4]
Length = 194
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 142/180 (78%), Gaps = 1/180 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ AN +L + LN LS TGQ++EKI +DTDRD F++A EAK+YGLID VM P K
Sbjct: 136 IEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAAEAKEYGLIDE-VMEPEK 194
>gi|78211620|ref|YP_380399.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9605]
gi|260436691|ref|ZP_05790661.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 8109]
gi|78196079|gb|ABB33844.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. CC9605]
gi|260414565|gb|EEX07861.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 8109]
Length = 224
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V+D +A+ +VAQ+L+L+A DP KDI +Y+NSPGGSVTAG+
Sbjct: 38 RAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGL 97
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ + PDV T+C GLAASMGAFLLS GTKGKR +LPN+RIMIHQPLGGAQG D
Sbjct: 98 AIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVD 157
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LNG ++ HTGQ L+KI+EDTDRD+F+S EA +YGLID VV
Sbjct: 158 IEIQAKEILYLKETLNGLMAEHTGQPLDKISEDTDRDYFLSPAEAVEYGLIDRVV 212
>gi|78183646|ref|YP_376080.1| peptidase S14, ClpP [Synechococcus sp. CC9902]
gi|124013821|sp|Q3B0U1.1|CLPP2_SYNS9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|78167940|gb|ABB25037.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9902]
Length = 207
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/175 (62%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V+D +A+ +VAQ+L+L+A DP KDI +Y+NSPGGSVTAG+
Sbjct: 21 RAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYVNSPGGSVTAGL 80
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ + PDV T+C GLAASMGAFLLS GTKGKR +LPN+RIMIHQPLGGAQG D
Sbjct: 81 AIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVD 140
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L K LNG L+ HTGQ L+KI+EDTDRD+F+S EA +YGLID VV
Sbjct: 141 IEIQAKEILFLKETLNGLLAEHTGQPLDKISEDTDRDYFLSPAEAVEYGLIDRVV 195
>gi|237745591|ref|ZP_04576071.1| ATP-dependent Clp protease [Oxalobacter formigenes HOxBLS]
gi|229376942|gb|EEO27033.1| ATP-dependent Clp protease [Oxalobacter formigenes HOxBLS]
Length = 207
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 140/172 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII GPV D AN+IVAQLL+L++ +P KDI +Y+NSPGGSV+AGMAI+
Sbjct: 32 DIYSRLLKERIIFLVGPVTDQNANLIVAQLLFLESENPEKDISLYINSPGGSVSAGMAIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ IRP VST+C GLAASMGAFLL+AG KGKR+SLPNSRIMIHQP GGAQG +DI++
Sbjct: 92 DTMQFIRPQVSTLCTGLAASMGAFLLAAGAKGKRFSLPNSRIMIHQPSGGAQGQATDIEI 151
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L+ + LNG L+ +TG+ +E+I DT+RD FMSA EAKDYGLID V+
Sbjct: 152 HAREILYLRERLNGILAENTGKPVEQIARDTERDNFMSAAEAKDYGLIDEVL 203
>gi|254179427|ref|ZP_04886026.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1655]
gi|254200063|ref|ZP_04906429.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei FMH]
gi|147749659|gb|EDK56733.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei FMH]
gi|184209967|gb|EDU07010.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1655]
Length = 211
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 144/174 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 33 RSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 92
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ ++PDVST+C+GLAASMGAFLL++G KGKRY+LPN+R+MIHQPLGGA+G SD
Sbjct: 93 AIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASD 152
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++QA E+L+ + LN L++HTGQ +E+I DTDRD FMS+E+AK YGLID V
Sbjct: 153 IEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 206
>gi|307129927|ref|YP_003881943.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Dickeya dadantii 3937]
gi|306527456|gb|ADM97386.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Dickeya dadantii 3937]
Length = 207
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G AASMGAFLL+AGTKGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQAASMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGFQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ HTGQ LE I DT+RD F+SA EA DYGL+D V+
Sbjct: 149 IEIHAKEILKVKARMNELMAKHTGQPLEAIERDTERDRFLSAAEAVDYGLVDSVL 203
>gi|427404659|ref|ZP_18895399.1| ATP-dependent Clp protease proteolytic subunit [Massilia timonae
CCUG 45783]
gi|425716830|gb|EKU79799.1| ATP-dependent Clp protease proteolytic subunit [Massilia timonae
CCUG 45783]
Length = 207
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 145/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPV D MAN+IVAQ+L+L++ +P+KDI +Y+NSPGGSV+AG+
Sbjct: 27 RAYDIYSRLLKERVIFLVGPVNDQMANLIVAQMLFLESENPDKDISLYINSPGGSVSAGL 86
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT+ I+PDVST+C GLAASMGAFLL+AG KGKR+SLPNSR+MIHQP GG+QG SD
Sbjct: 87 AIFDTMNFIKPDVSTLCTGLAASMGAFLLAAGAKGKRFSLPNSRVMIHQPSGGSQGMASD 146
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ + L ++ +TGQ++E+I++DTDRD FMSAEE+ +YG+ID V+
Sbjct: 147 IEIQAKEILYLRERLARIMADNTGQSIEQIHKDTDRDRFMSAEESVEYGMIDKVL 201
>gi|229591362|ref|YP_002873481.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens SBW25]
gi|259585962|sp|C3JYK0.1|CLPP_PSEFS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|229363228|emb|CAY50311.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudomonas
fluorescens SBW25]
Length = 211
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 149/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG +
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAE 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKR+ LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G TLE+I DT
Sbjct: 126 GKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGHTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE A+DYGLID V+
Sbjct: 186 NRDNFMSAEAARDYGLIDAVI 206
>gi|387894467|ref|YP_006324764.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens A506]
gi|423692342|ref|ZP_17666862.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens SS101]
gi|213521159|gb|ACJ50516.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens SS101]
gi|387164635|gb|AFJ59834.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens A506]
gi|387998810|gb|EIK60139.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens SS101]
Length = 211
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 150/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG +
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAE 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKR+ LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G+TLE+I DT
Sbjct: 126 GKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE AK+YGLID V+
Sbjct: 186 NRDNFMSAEAAKEYGLIDAVI 206
>gi|53723667|ref|YP_103112.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia mallei
ATCC 23344]
gi|76808778|ref|YP_333874.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1710b]
gi|167719122|ref|ZP_02402358.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei DM98]
gi|167738116|ref|ZP_02410890.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 14]
gi|167815308|ref|ZP_02446988.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 91]
gi|167823710|ref|ZP_02455181.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 9]
gi|167845261|ref|ZP_02470769.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei B7210]
gi|167893805|ref|ZP_02481207.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 7894]
gi|167902257|ref|ZP_02489462.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei NCTC 13177]
gi|167910496|ref|ZP_02497587.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 112]
gi|167918525|ref|ZP_02505616.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei BCC215]
gi|67460238|sp|Q62JK7.1|CLPP_BURMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|92087004|sp|Q3JRC9.1|CLPP_BURP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|52427090|gb|AAU47683.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei ATCC 23344]
gi|76578231|gb|ABA47706.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1710b]
Length = 207
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 144/174 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 29 RSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ ++PDVST+C+GLAASMGAFLL++G KGKRY+LPN+R+MIHQPLGGA+G SD
Sbjct: 89 AIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++QA E+L+ + LN L++HTGQ +E+I DTDRD FMS+E+AK YGLID V
Sbjct: 149 IEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 202
>gi|297616502|ref|YP_003701661.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophothermus lipocalidus DSM 12680]
gi|297144339|gb|ADI01096.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Syntrophothermus lipocalidus DSM 12680]
Length = 203
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/174 (58%), Positives = 139/174 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G P++D +AN+I+AQ L+L+A DP+KDI Y+NSPGGS++AGM
Sbjct: 20 RAYDIYSRLLKDRIVFLGSPIDDQVANLIIAQFLFLEAEDPDKDIHFYINSPGGSISAGM 79
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT++++RPDVST+CVG+AASMGAFLL+AG KGKR++LPNS IMIHQP+GG QG +D
Sbjct: 80 AIFDTMQYLRPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPIGGTQGQATD 139
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++ A +++ K LN L+ TGQ LE I D +RDFFM+AEEAK YG+ID +
Sbjct: 140 IEIHARRIVNLKKRLNQILAERTGQKLEVIERDVERDFFMTAEEAKAYGIIDDI 193
>gi|167562414|ref|ZP_02355330.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
oklahomensis EO147]
gi|167569597|ref|ZP_02362471.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
oklahomensis C6786]
Length = 207
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/174 (60%), Positives = 143/174 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 29 RSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ ++PDVST+C+GLAASMGAFLL++G KGKRY+LPN+R+MIHQPLGGA+G SD
Sbjct: 89 AIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++QA E+L+ K LN L+ HTGQ +E+I DTDRD FMS+E+AK YGLID V
Sbjct: 149 IEIQAREILYLKDRLNHLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 202
>gi|312961789|ref|ZP_07776287.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens WH6]
gi|395495006|ref|ZP_10426585.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
PAMC 25886]
gi|395794594|ref|ZP_10473915.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
Ag1]
gi|421137891|ref|ZP_15597967.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens BBc6R8]
gi|311284048|gb|EFQ62631.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens WH6]
gi|395341259|gb|EJF73079.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
Ag1]
gi|404510950|gb|EKA24844.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens BBc6R8]
Length = 211
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 149/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG +
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAE 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKRY LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G TLE+I DT
Sbjct: 126 GKRYCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGHTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE A++YGLID V+
Sbjct: 186 NRDNFMSAEAAREYGLIDAVI 206
>gi|451936350|ref|YP_007460204.1| ATP-dependent Clp protease, protease subunit [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
gi|451777273|gb|AGF48248.1| ATP-dependent Clp protease, protease subunit [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
Length = 210
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/202 (55%), Positives = 151/202 (74%), Gaps = 7/202 (3%)
Query: 85 EVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
E+ S Y+PT EQ G R ++ S+L + RI+ GPV D AN+++AQLL
Sbjct: 12 EITSFNYVPTVI--EQSGRSE-----RAYDIYSRLLKERIVFLSGPVTDYSANLVIAQLL 64
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L++ DP+KDI +Y+NSPGGSV AGMAIFDT+ I+PD+ST+CVG+AASMGAFLL++GTK
Sbjct: 65 FLESDDPSKDIFLYVNSPGGSVYAGMAIFDTMNFIKPDISTMCVGIAASMGAFLLASGTK 124
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKR+SLPN+ +MIHQP GGAQG SDI + A E+L + LN L+ +TGQT+EKI+ DT
Sbjct: 125 GKRFSLPNACMMIHQPSGGAQGQASDIQIHAEEILRLRNRLNKILADNTGQTMEKISNDT 184
Query: 265 DRDFFMSAEEAKDYGLIDGVVM 286
DRD FMSA +A +YGLID +++
Sbjct: 185 DRDNFMSANDALNYGLIDKILV 206
>gi|421872665|ref|ZP_16304283.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
laterosporus GI-9]
gi|372458638|emb|CCF13832.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
laterosporus GI-9]
Length = 193
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P+ D +AN +VAQLL+L A DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIFLGTPINDQVANSVVAQLLFLQAEDPDKDISIYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVGLAASMG+FLL AG KGKRY+LPNS IMIHQPLGGAQG SD
Sbjct: 76 AIYDTMQYIKPDVSTICVGLAASMGSFLLCAGAKGKRYALPNSEIMIHQPLGGAQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A ++ + +LNG + TGQ E+I +DTDRD F+SA+ AK+YGLID V+
Sbjct: 136 IEIAAKRIIKMREHLNGIYAERTGQPYERIAKDTDRDNFLSAQAAKEYGLIDEVI 190
>gi|78212970|ref|YP_381749.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9605]
gi|78197429|gb|ABB35194.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. CC9605]
Length = 218
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/186 (62%), Positives = 140/186 (75%), Gaps = 5/186 (2%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V D AN IVAQ+L+L+A DP KDI +Y+NSPGGSV G+ IF
Sbjct: 38 DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGSVYDGLGIF 97
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HI+PDV TVCVGLAASMGAFLL AGTKGKR SL +SRIMIHQPLGGAQG SDI +
Sbjct: 98 DTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQPLGGAQGQASDIRI 157
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQ 293
QA+E+L K LN LS TGQTL++I +DTDRDFFMS EA +YGLID V+ +
Sbjct: 158 QADEILFLKERLNKELSDRTGQTLDRIQQDTDRDFFMSPTEAMNYGLIDSVIDK-----R 212
Query: 294 PVAAAA 299
PV A A
Sbjct: 213 PVQAVA 218
>gi|159904323|ref|YP_001551667.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9211]
gi|159889499|gb|ABX09713.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9211]
Length = 200
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/175 (62%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D +A+ +VAQ+L+L+A DP KDI +Y+NSPGGSVTAG+
Sbjct: 22 RAFDIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEAEDPEKDIQLYINSPGGSVTAGL 81
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ + PDV T+C GLAASMGAFLLS GTKGKR SLPNSRIMIHQPLGGAQG +
Sbjct: 82 AIYDTMQQVTPDVVTICYGLAASMGAFLLSGGTKGKRVSLPNSRIMIHQPLGGAQGQAVE 141
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L K LNG LS HTGQ ++KI EDTDRD F+S +EA +YGLID V+
Sbjct: 142 IEIQAKEILFLKETLNGLLSEHTGQPIDKIAEDTDRDHFLSPQEAVEYGLIDKVI 196
>gi|345874540|ref|ZP_08826351.1| endopeptidase [Neisseria weaveri LMG 5135]
gi|417957883|ref|ZP_12600801.1| endopeptidase [Neisseria weaveri ATCC 51223]
gi|343967629|gb|EGV35872.1| endopeptidase [Neisseria weaveri ATCC 51223]
gi|343970451|gb|EGV38628.1| endopeptidase [Neisseria weaveri LMG 5135]
Length = 207
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/209 (55%), Positives = 155/209 (74%), Gaps = 9/209 (4%)
Query: 85 EVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
E+ +S +PT + + G G R ++ S+L + RII GPV D AN++VAQLL
Sbjct: 4 EINNSYLVPTVIE-QSGRGE------RAFDIYSRLLKERIIFLVGPVNDQTANLVVAQLL 56
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L++ +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G AASMGAFLLSAGTK
Sbjct: 57 FLESENPDKDIFLYINSPGGSVTAGMSIYDTMKFIKPDVSTLCLGQAASMGAFLLSAGTK 116
Query: 205 GKRYSLPNSRIMIHQPL--GGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINE 262
GKR++LPNSRIMIHQPL GG G SDI++ A E++ K LN L+ H+GQ L K+
Sbjct: 117 GKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELIKIKEKLNRLLAEHSGQDLAKVER 176
Query: 263 DTDRDFFMSAEEAKDYGLIDGVVMNPHKI 291
DTDRD +MSA+EA++YGLID V++N I
Sbjct: 177 DTDRDNYMSADEAQEYGLIDQVLVNRESI 205
>gi|398996366|ref|ZP_10699223.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM21]
gi|398126897|gb|EJM16318.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM21]
Length = 211
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/201 (55%), Positives = 148/201 (73%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAA 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKRY LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G TLE+I DT
Sbjct: 126 GKRYCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGHTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE A+DYGLID V+
Sbjct: 186 NRDNFMSAEAARDYGLIDEVI 206
>gi|284097335|ref|ZP_06385465.1| Peptidase S14, ClpP [Candidatus Poribacteria sp. WGA-A3]
gi|283831154|gb|EFC35134.1| Peptidase S14, ClpP [Candidatus Poribacteria sp. WGA-A3]
Length = 203
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/176 (57%), Positives = 143/176 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +N+I+AQLL+L+A DP KDI +Y+NSPGGSVTAGM
Sbjct: 15 RAYDIYSRLLKDRIIFLGAPIDDIFSNLIIAQLLFLEAEDPEKDINLYINSPGGSVTAGM 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
I+DT+++++P ++T+C+G AASMGA LL+AGT+GKR++LPN+R+MIHQP+GG QG ++
Sbjct: 75 GIYDTMQYVKPPITTICLGQAASMGALLLAAGTQGKRHALPNARVMIHQPMGGFQGQATE 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVM 286
ID+ A E+L + LN LS HTGQ LEKI++DT+RD+FMS EAKDYGLID V++
Sbjct: 135 IDIHAREILKIRERLNQILSEHTGQALEKISQDTERDYFMSGTEAKDYGLIDEVIV 190
>gi|223043057|ref|ZP_03613105.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus capitis SK14]
gi|417905699|ref|ZP_12549498.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus capitis VCU116]
gi|222443911|gb|EEE50008.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus capitis SK14]
gi|341598593|gb|EGS41093.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus capitis VCU116]
Length = 195
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/179 (58%), Positives = 142/179 (79%), Gaps = 1/179 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPH 289
I++ AN +L + LN L+ TGQ++EKI +DTDRD F++AEEAK+YGLID VM P
Sbjct: 136 IEIAANHILKTREKLNRILAERTGQSIEKIQQDTDRDNFLTAEEAKEYGLIDE-VMEPE 193
>gi|429083886|ref|ZP_19146912.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
condimenti 1330]
gi|426547240|emb|CCJ72953.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
condimenti 1330]
Length = 189
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 11 RSYDIFSRLLKERIIFLTGQVEDQMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 70
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G AASMGAFLL+AGTKGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 71 SIYDTMQFIQPDVSTICMGQAASMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATD 130
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ HTGQ LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 131 IEIHAREILKVKARMNELMAQHTGQPLEQIERDTERDRFLSASEAVEYGLVDSIM 185
>gi|251790648|ref|YP_003005369.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya zeae
Ech1591]
gi|247539269|gb|ACT07890.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya zeae
Ech1591]
Length = 207
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G AASMGAFLL+AGTKGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQAASMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGFQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ HTGQ LE I DT+RD F+SA EA DYGL+D V+
Sbjct: 149 IEIHAKEILKVKARMNELMAKHTGQPLEMIERDTERDRFLSAAEAVDYGLVDSVL 203
>gi|342905185|ref|ZP_08726974.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M21621]
gi|419840044|ref|ZP_14363442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
haemolyticus HK386]
gi|341951687|gb|EGT78246.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M21621]
gi|386908569|gb|EIJ73261.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
haemolyticus HK386]
Length = 193
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 140/177 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L++ DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDINIYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PD+ T+C+G A SMGAFLL+ GT GKR +LPN+R+MIHQPLGG +G SD
Sbjct: 76 AIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVMIHQPLGGFRGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I + A E+L K LN L++HTGQ++E+I +DTDRD FMSAEEAK YGL+D V++
Sbjct: 136 IQIHAQEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEAKAYGLVDEVLIK 192
>gi|403745256|ref|ZP_10954194.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus hesperidum URH17-3-68]
gi|403121484|gb|EJY55777.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus hesperidum URH17-3-68]
Length = 185
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++DD+AN +VAQLL+L A DP+KDI MY+NSPGGSV+AG+
Sbjct: 9 RSYDIYSRLLKDRIIFLGTAIDDDVANAVVAQLLFLAADDPDKDIQMYINSPGGSVSAGL 68
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++HI+PDVST+CVG+AASMGA LL+AG KGKR++LPNS +MIHQPLGGA+G SD
Sbjct: 69 AIYDTMQHIKPDVSTMCVGMAASMGAVLLTAGAKGKRFALPNSEVMIHQPLGGARGQASD 128
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +L + LN L+ +GQ LE++ +DTDRD FMSAEEAK YGLID V+
Sbjct: 129 IEIHARHILKTRERLNKILAERSGQPLERVAQDTDRDNFMSAEEAKAYGLIDEVI 183
>gi|124026830|ref|YP_001015945.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
NATL1A]
gi|123961898|gb|ABM76681.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
NATL1A]
Length = 218
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/181 (60%), Positives = 142/181 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D +A+ +VAQ+L+L+A DP KDI +Y+NSPGGSVTAG+
Sbjct: 38 RAFDIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEADDPEKDIQLYVNSPGGSVTAGL 97
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ + PDV T+C GLAASMGAFLLS GTKGKR +LPNSRIMIHQPLGGAQG +
Sbjct: 98 AIYDTMQQVSPDVITICYGLAASMGAFLLSGGTKGKRLALPNSRIMIHQPLGGAQGQAVE 157
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L+ K LN L+ HTGQ ++KI+EDTDRD F+S +EA +YGLID VV N +
Sbjct: 158 IEIQAKEILYLKETLNSLLAEHTGQNIQKISEDTDRDHFLSPQEAVEYGLIDKVVSNLNS 217
Query: 291 I 291
I
Sbjct: 218 I 218
>gi|116256436|sp|Q3AJN8.2|CLPP2_SYNSC RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
Length = 197
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/186 (62%), Positives = 140/186 (75%), Gaps = 5/186 (2%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V D AN IVAQ+L+L+A DP KDI +Y+NSPGGSV G+ IF
Sbjct: 17 DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGSVYDGLGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HI+PDV TVCVGLAASMGAFLL AGTKGKR SL +SRIMIHQPLGGAQG SDI +
Sbjct: 77 DTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQPLGGAQGQASDIRI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQ 293
QA+E+L K LN LS TGQTL++I +DTDRDFFMS EA +YGLID V+ +
Sbjct: 137 QADEILFLKERLNKELSDRTGQTLDRIQQDTDRDFFMSPTEAMNYGLIDSVIDK-----R 191
Query: 294 PVAAAA 299
PV A A
Sbjct: 192 PVQAVA 197
>gi|339007073|ref|ZP_08639648.1| ATP-dependent Clp protease proteolytic subunit 1 [Brevibacillus
laterosporus LMG 15441]
gi|338776282|gb|EGP35810.1| ATP-dependent Clp protease proteolytic subunit 1 [Brevibacillus
laterosporus LMG 15441]
Length = 195
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P+ D +AN +VAQLL+L A DP+KDI +Y+NSPGGS+TAGM
Sbjct: 18 RAYDIYSRLLKDRIIFLGTPINDQVANSVVAQLLFLQAEDPDKDISIYINSPGGSITAGM 77
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVGLAASMG+FLL AG KGKRY+LPNS IMIHQPLGGAQG SD
Sbjct: 78 AIYDTMQYIKPDVSTICVGLAASMGSFLLCAGAKGKRYALPNSEIMIHQPLGGAQGQASD 137
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A ++ + +LNG + TGQ E+I +DTDRD F+SA+ AK+YGLID V+
Sbjct: 138 IEIAAKRIIKMREHLNGIYAERTGQPYERIAKDTDRDNFLSAQAAKEYGLIDEVI 192
>gi|89073230|ref|ZP_01159760.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium sp.
SKA34]
gi|90579278|ref|ZP_01235088.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
angustum S14]
gi|89050940|gb|EAR56404.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium sp.
SKA34]
gi|90440111|gb|EAS65292.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
angustum S14]
Length = 207
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN++VAQLL+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+P+VSTVC+G A SMGAFLL+ G KGKRY LPNSR+MIHQPLGG QG SD
Sbjct: 89 SIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRVMIHQPLGGFQGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LNG L+ HTGQ LE + DTDRD FMSAE+A +YGL+D V+
Sbjct: 149 IQIHAQEILTIKQRLNGLLAEHTGQPLEVVERDTDRDNFMSAEQAVEYGLVDAVL 203
>gi|374977816|pdb|3V5I|A Chain A, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977817|pdb|3V5I|B Chain B, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977818|pdb|3V5I|C Chain C, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977819|pdb|3V5I|D Chain D, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977820|pdb|3V5I|E Chain E, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977821|pdb|3V5I|F Chain F, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977822|pdb|3V5I|G Chain G, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977823|pdb|3V5I|H Chain H, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977824|pdb|3V5I|I Chain I, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977825|pdb|3V5I|J Chain J, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977826|pdb|3V5I|K Chain K, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977827|pdb|3V5I|L Chain L, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977828|pdb|3V5I|M Chain M, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977829|pdb|3V5I|N Chain N, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977830|pdb|3V5I|O Chain O, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977831|pdb|3V5I|P Chain P, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977832|pdb|3V5I|Q Chain Q, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977833|pdb|3V5I|R Chain R, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977834|pdb|3V5I|S Chain S, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977835|pdb|3V5I|T Chain T, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977836|pdb|3V5I|U Chain U, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977837|pdb|3V5I|V Chain V, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977838|pdb|3V5I|W Chain W, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977839|pdb|3V5I|X Chain X, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977840|pdb|3V5I|Y Chain Y, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977841|pdb|3V5I|Z Chain Z, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977842|pdb|3V5I|AA Chain a, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977843|pdb|3V5I|BB Chain b, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
Length = 203
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/184 (57%), Positives = 144/184 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AA+MG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ AN +L + LN LS TGQ++EKI +DTDRD F++AEEAK+YGLID V++ K
Sbjct: 136 IEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETK 195
Query: 291 ILQP 294
P
Sbjct: 196 WSHP 199
>gi|189219051|ref|YP_001939692.1| ATP-dependent Clp protease proteolytic subunit [Methylacidiphilum
infernorum V4]
gi|189185909|gb|ACD83094.1| ATP-dependent Clp protease proteolytic subunit [Methylacidiphilum
infernorum V4]
Length = 219
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/185 (60%), Positives = 144/185 (77%), Gaps = 1/185 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G P++D+MAN+++AQLL+L DP KDI +Y++SPGG VTAGM
Sbjct: 25 RGYDIFSRLLKDRIVFIGTPIDDNMANLVIAQLLFLQMEDPKKDINLYIHSPGGYVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ + DV+T C+G AASM A LL+AGTKGKR++LPN+RIMIHQPLGGAQG SD
Sbjct: 85 AIYDTMQFLSCDVNTYCIGQAASMAAVLLAAGTKGKRFALPNARIMIHQPLGGAQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I +QA E+L K LN LSYHT Q LE+I +DTDRDFFMSAE+AK YG+ID VV
Sbjct: 145 ISIQAQEILRTKRLLNEILSYHTKQPLERIEKDTDRDFFMSAEDAKAYGIIDEVV-KTKI 203
Query: 291 ILQPV 295
+L+PV
Sbjct: 204 MLRPV 208
>gi|195952528|ref|YP_002120818.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. Y04AAS1]
gi|195932140|gb|ACG56840.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. Y04AAS1]
Length = 205
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L Q RI+ G P++D +AN+IVAQLL+L+A DP KDI MY+NSPGGSVTAG+
Sbjct: 27 RAYDIYSRLLQDRIVILGFPIDDHVANLIVAQLLFLEAQDPEKDIQMYINSPGGSVTAGL 86
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDV+T+C+G AASMGA LL+AGTKGKR++LPN+RIMIHQPLGG QG +D
Sbjct: 87 AIYDTMQYIKPDVTTICIGQAASMGAVLLAAGTKGKRFALPNARIMIHQPLGGVQGQATD 146
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+ K LN L+ TG+ L +I +D DRD+FMSAEEAK+YGLID V+
Sbjct: 147 ILIHAEEIKRIKHILNTILANATGKNLRQIEKDVDRDYFMSAEEAKNYGLIDKVI 201
>gi|123969397|ref|YP_001010255.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
AS9601]
gi|126697184|ref|YP_001092070.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9301]
gi|123199507|gb|ABM71148.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
AS9601]
gi|126544227|gb|ABO18469.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9301]
Length = 214
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G + D +++ +VAQLL+L+A DP KDI +Y+NSPGGSVTAGM
Sbjct: 38 RAFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPEKDIQIYINSPGGSVTAGM 97
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I PDV T+C G+AASMGAFLLS G KGKR +LPNSRIMIHQPLGGAQG +
Sbjct: 98 AIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGAQGQAVE 157
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L K LN L+ HTGQ LEKINEDT+RD+F+S EA +YGLID V+
Sbjct: 158 IEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSEAVEYGLIDKVI 212
>gi|398948873|ref|ZP_10672975.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM33]
gi|398160047|gb|EJM48329.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM33]
Length = 211
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 150/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG +
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAQ 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKRY LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G+TLE+I DT
Sbjct: 126 GKRYCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE A++YGLID V+
Sbjct: 186 NRDNFMSAEAAREYGLIDEVI 206
>gi|452991802|emb|CCQ96761.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
ultunense Esp]
Length = 194
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/180 (60%), Positives = 142/180 (78%), Gaps = 1/180 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GG V D A++IVAQLL+L+A DP+KDI +Y+NSPGG+V+AG
Sbjct: 16 RSYDIYSRLLKERIIFLGGEVNDVTADLIVAQLLFLEAEDPDKDIQLYINSPGGAVSAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G AASMGAFLL+AG KGKR+SLPNS IMIHQPLGG QG D
Sbjct: 76 AIYDTMQYIKPDVSTICIGRAASMGAFLLAAGAKGKRFSLPNSDIMIHQPLGGTQGQAED 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I + A +++ + +N LS TGQ LEKI+ DTDRDFFM+A+EAK+YG+ID V+ P K
Sbjct: 136 IRIHAEKIIQTRELINKILSERTGQPLEKISRDTDRDFFMTAKEAKEYGIIDKVI-QPRK 194
>gi|398840797|ref|ZP_10598029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM102]
gi|398860148|ref|ZP_10615806.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM79]
gi|398903999|ref|ZP_10652021.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM50]
gi|398109809|gb|EJL99725.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM102]
gi|398176428|gb|EJM64147.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM50]
gi|398235353|gb|EJN21184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM79]
Length = 211
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 150/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG +
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAQ 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKRY LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G+TLE+I DT
Sbjct: 126 GKRYCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE A++YGLID V+
Sbjct: 186 NRDNFMSAEAAREYGLIDEVI 206
>gi|359785395|ref|ZP_09288547.1| ATP-dependent Clp protease proteolytic subunit [Halomonas sp.
GFAJ-1]
gi|359297324|gb|EHK61560.1| ATP-dependent Clp protease proteolytic subunit [Halomonas sp.
GFAJ-1]
Length = 205
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/193 (56%), Positives = 146/193 (75%), Gaps = 6/193 (3%)
Query: 99 EQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPN 152
+ GG PM++ R ++ S+L + R+I GPVED MAN++VAQLL+L++ +P+
Sbjct: 7 QNAGGLVPMVVEQSAKGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLESENPD 66
Query: 153 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 212
KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVSTVC+G AASMGA LL+AG GKRY LPN
Sbjct: 67 KDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTVCIGQAASMGALLLTAGAAGKRYCLPN 126
Query: 213 SRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSA 272
SR+MIHQPLGG QG SDI++ E+L + LN L++HTGQ +E + DTDRD FMSA
Sbjct: 127 SRVMIHQPLGGYQGQASDIEIHTREILGIREKLNQILAHHTGQDIETVASDTDRDNFMSA 186
Query: 273 EEAKDYGLIDGVV 285
+AK+YGLID V+
Sbjct: 187 HKAKEYGLIDAVL 199
>gi|314933077|ref|ZP_07840443.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus caprae C87]
gi|313654396|gb|EFS18152.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus caprae C87]
Length = 195
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/179 (58%), Positives = 142/179 (79%), Gaps = 1/179 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPH 289
I++ AN +L + LN L+ TGQ++EKI +DTDRD F++AEEAK+YGLID VM P
Sbjct: 136 IEIAANHILKTREKLNRILAERTGQSIEKIQQDTDRDNFLTAEEAKEYGLIDE-VMEPE 193
>gi|296112317|ref|YP_003626255.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis RH4]
gi|295920011|gb|ADG60362.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis BBH18]
Length = 217
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/172 (62%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED+MAN+IVAQLL+L+A +P KDI +Y+NSPGG VTAGMAI+
Sbjct: 39 DIFSRLLRERVIFLTGQVEDNMANLIVAQLLFLEADNPEKDIHLYINSPGGVVTAGMAIY 98
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+ I+P VST+C+G AASMG+FLLSAG KGKRY+L NSR+MIHQPLGG +G SDI++
Sbjct: 99 DTMNFIKPHVSTICMGQAASMGSFLLSAGEKGKRYALANSRVMIHQPLGGFRGQASDIEI 158
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E++ KA LN L+ HTGQ +EK+ DTDRD FMSAE+A+DYGL+D V+
Sbjct: 159 HAREIIELKAKLNRLLAEHTGQPIEKLERDTDRDHFMSAEQARDYGLVDVVL 210
>gi|414161436|ref|ZP_11417696.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simulans ACS-120-V-Sch1]
gi|410876332|gb|EKS24243.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simulans ACS-120-V-Sch1]
Length = 194
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 143/180 (79%), Gaps = 1/180 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ A +L +A LN LS TGQ++E+I +DTDRD F++A+EAK+YGLID VM P K
Sbjct: 136 IEIAATHILKTRAKLNKILSERTGQSIEQIEKDTDRDNFLTADEAKEYGLIDE-VMQPEK 194
>gi|416156277|ref|ZP_11604409.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 101P30B1]
gi|416216367|ref|ZP_11623691.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 7169]
gi|416220781|ref|ZP_11625590.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 103P14B1]
gi|416228844|ref|ZP_11627776.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 46P47B1]
gi|416236087|ref|ZP_11630453.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 12P80B1]
gi|416237864|ref|ZP_11631219.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis BC1]
gi|416243368|ref|ZP_11633889.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis BC7]
gi|416245839|ref|ZP_11634734.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis BC8]
gi|416248951|ref|ZP_11636285.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis CO72]
gi|416253183|ref|ZP_11638206.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis O35E]
gi|421779131|ref|ZP_16215625.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis RH4]
gi|326561827|gb|EGE12162.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 7169]
gi|326563259|gb|EGE13526.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 46P47B1]
gi|326563373|gb|EGE13638.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 12P80B1]
gi|326565911|gb|EGE16072.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 103P14B1]
gi|326568952|gb|EGE19021.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis BC1]
gi|326569251|gb|EGE19312.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis BC7]
gi|326571926|gb|EGE21931.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis BC8]
gi|326575439|gb|EGE25364.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 101P30B1]
gi|326576473|gb|EGE26381.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis CO72]
gi|326577944|gb|EGE27808.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis O35E]
gi|407813572|gb|EKF84352.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis RH4]
Length = 217
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/172 (62%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED+MAN+IVAQLL+L+A +P KDI +Y+NSPGG VTAGMAI+
Sbjct: 39 DIFSRLLRERVIFLTGQVEDNMANLIVAQLLFLEADNPEKDIHLYINSPGGVVTAGMAIY 98
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+ I+P VST+C+G AASMG+FLLSAG KGKRY+L NSR+MIHQPLGG +G SDI++
Sbjct: 99 DTMNFIKPHVSTICMGQAASMGSFLLSAGEKGKRYALANSRVMIHQPLGGFRGQASDIEI 158
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E++ KA LN L+ HTGQ +EK+ DTDRD FMSAE+A+DYGL+D V+
Sbjct: 159 HAREIIELKAKLNRLLAEHTGQPIEKLERDTDRDHFMSAEQARDYGLVDVVL 210
>gi|254456794|ref|ZP_05070222.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sulfurimonas
gotlandica GD1]
gi|373867413|ref|ZP_09603811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sulfurimonas
gotlandica GD1]
gi|207085586|gb|EDZ62870.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sulfurimonas
gotlandica GD1]
gi|372469514|gb|EHP29718.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sulfurimonas
gotlandica GD1]
Length = 196
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/200 (56%), Positives = 149/200 (74%), Gaps = 7/200 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
YIP Y + G G R ++ S+L + RII G V D +A+ IVAQ+L+L+A D
Sbjct: 3 YIP-YVVEKTGRGE------RSYDIYSRLLKDRIIMLSGEVNDAVASSIVAQMLFLEAED 55
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P KDI Y+NSPGG VTAGMAIFDT+ +IRP ++T+C+G AASMGAFLLS+G KGKRY+L
Sbjct: 56 PEKDIYFYINSPGGVVTAGMAIFDTMNYIRPHITTICIGQAASMGAFLLSSGEKGKRYAL 115
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
P++RIMIHQPLGGAQG +DI +QA E+L KA LN L+ +TGQ+++K+ +DTDRD FM
Sbjct: 116 PHARIMIHQPLGGAQGQATDIAIQAKEILRMKAELNEILAKNTGQSVKKVEKDTDRDNFM 175
Query: 271 SAEEAKDYGLIDGVVMNPHK 290
SA EA++YG+ID V++ K
Sbjct: 176 SASEAQEYGMIDEVLVKNDK 195
>gi|78780133|ref|YP_398245.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9312]
gi|115311352|sp|Q317Y6.1|CLPP4_PROM9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 4;
AltName: Full=Endopeptidase Clp 4
gi|78713632|gb|ABB50809.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9312]
Length = 219
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G + D +++ +VAQLL+L+A DP KDI +Y+NSPGGSVTAGM
Sbjct: 43 RAFDIYSRLLRERIIFLGSGINDQVSDSLVAQLLFLEAEDPEKDIQIYINSPGGSVTAGM 102
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I PDV T+C G+AASMGAFLLS G KGKR +LPNSRIMIHQPLGGAQG +
Sbjct: 103 AIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGAQGQAVE 162
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L K LN L+ HTGQ LEKINEDT+RD+F+S EA +YGLID V+
Sbjct: 163 IEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSEAVEYGLIDKVI 217
>gi|88809960|ref|ZP_01125465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 7805]
gi|88786150|gb|EAR17312.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 7805]
Length = 229
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/175 (62%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V+D +A+ +VAQLL+L+A DP KDI +Y+NSPGGSVTAG+
Sbjct: 43 RAFDIYSRLLRERIIFLGTGVDDAVADALVAQLLFLEAEDPEKDIQVYINSPGGSVTAGL 102
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ + PDV T+C GLAASMGAFLLS GTKGKR +LPN+RIMIHQP+GGAQG D
Sbjct: 103 AIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPMGGAQGQAVD 162
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L K LNG ++ HTGQ L+KI EDTDRD+F+S EA DYGLID VV
Sbjct: 163 IEIQAKEILFLKETLNGLMAEHTGQPLDKIAEDTDRDYFLSPSEAVDYGLIDRVV 217
>gi|374604920|ref|ZP_09677867.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
dendritiformis C454]
gi|374389443|gb|EHQ60818.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
dendritiformis C454]
Length = 192
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D +AN I+AQ+L+L A DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RSYDIYSRLLKDRIIFLGSQVNDVVANSIIAQMLFLQADDPDKDIHLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++HI+PDVST+CVG+AASMGAFLL+AG KGKR++LPNS IMIHQPLGGA+G SD
Sbjct: 76 AIYDTMQHIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGAEGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I+++A +L + LN L+ TGQ L++I DTDRD+FMSAEEA +YGL+D V+
Sbjct: 136 IEIRARRILKMRDKLNHILAERTGQPLDRIERDTDRDYFMSAEEALEYGLVDKVL 190
>gi|444375828|ref|ZP_21175080.1| ATP-dependent Clp protease proteolytic subunit [Enterovibrio sp.
AK16]
gi|443680056|gb|ELT86704.1| ATP-dependent Clp protease proteolytic subunit [Enterovibrio sp.
AK16]
Length = 207
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN++VAQLL+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+++I+PDVSTVC+G A SMGAFLL+ G KGKRY LPNSR+MIHQPLGG QG SD
Sbjct: 89 SIYDTMQYIKPDVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRVMIHQPLGGFQGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ HTGQ LE I DTDRD FM+A++A DYGL+D V+
Sbjct: 149 IQIHAQEILTIKQKLNTLLAEHTGQPLEVIERDTDRDNFMAAQDAADYGLVDAVL 203
>gi|157414262|ref|YP_001485128.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9215]
gi|157388837|gb|ABV51542.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9215]
Length = 214
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G + D +++ +VAQLL+L+A DP KDI +Y+NSPGGSVTAGM
Sbjct: 38 RAFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPEKDIQIYINSPGGSVTAGM 97
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I PDV T+C G+AASMGAFLLS G KGKR +LPNSRIMIHQPLGGAQG +
Sbjct: 98 AIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGAQGQAVE 157
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L K LN L+ HTGQ LEKINEDT+RD+F+S EA +YGLID V+
Sbjct: 158 IEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSEAVEYGLIDKVI 212
>gi|17546430|ref|NP_519832.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia
solanacearum GMI1000]
gi|83745913|ref|ZP_00942970.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia
solanacearum UW551]
gi|207743049|ref|YP_002259441.1| atp-atp-dependent clp protease proteolytic subunit (endopeptidase
clp) protein [Ralstonia solanacearum IPO1609]
gi|300691404|ref|YP_003752399.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Ralstonia solanacearum PSI07]
gi|300703972|ref|YP_003745574.1| proteolytic subunit of clpa-clpp ATP-dependent serine protease
[Ralstonia solanacearum CFBP2957]
gi|386333413|ref|YP_006029583.1| atp-atp-dependent clp protease proteolytic subunit (endopeptidase
clp) protein [Ralstonia solanacearum Po82]
gi|421888083|ref|ZP_16319197.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Ralstonia solanacearum K60-1]
gi|421898197|ref|ZP_16328564.1| atp-atp-dependent clp protease proteolytic subunit (endopeptidase
clp) protein [Ralstonia solanacearum MolK2]
gi|22653696|sp|Q8XYP7.1|CLPP_RALSO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|17428728|emb|CAD15413.1| probable atp-atp-dependent clp protease proteolytic subunit
(endopeptidase clp). transmembrane protein [Ralstonia
solanacearum GMI1000]
gi|83727603|gb|EAP74724.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia
solanacearum UW551]
gi|206589403|emb|CAQ36365.1| atp-atp-dependent clp protease proteolytic subunit (endopeptidase
clp) protein [Ralstonia solanacearum MolK2]
gi|206594446|emb|CAQ61373.1| atp-atp-dependent clp protease proteolytic subunit (endopeptidase
clp) protein [Ralstonia solanacearum IPO1609]
gi|299066731|emb|CBJ37925.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Ralstonia solanacearum CMR15]
gi|299071635|emb|CBJ42959.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Ralstonia solanacearum CFBP2957]
gi|299078464|emb|CBJ51116.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Ralstonia solanacearum PSI07]
gi|334195862|gb|AEG69047.1| atp-atp-dependent clp protease proteolytic subunit (endopeptidase
clp) protein [Ralstonia solanacearum Po82]
gi|344167643|emb|CCA79883.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[blood disease bacterium R229]
gi|344174667|emb|CCA86475.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Ralstonia syzygii R24]
gi|378966546|emb|CCF95945.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Ralstonia solanacearum K60-1]
Length = 217
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 115/212 (54%), Positives = 159/212 (75%), Gaps = 7/212 (3%)
Query: 80 IRNDLEVPSSPYIPTYAQGEQGGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVED 133
IRN+L + A QG G PM++ GR + ++ S+L + R+I G V D
Sbjct: 2 IRNEL-IDQLARTQASALETQGLGLVPMVVEQSGRGERAYDIYSRLLKERVIFMVGEVND 60
Query: 134 DMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAAS 193
AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AG+A++DT++ ++PDVST+C+G+AAS
Sbjct: 61 QTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGLAMYDTMQFVKPDVSTLCMGMAAS 120
Query: 194 MGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHT 253
MGAFLL+AG KGKRY+LPNSRIMIHQPLGGA+G SDI++QA E+L+ + LN LS T
Sbjct: 121 MGAFLLAAGAKGKRYALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNTILSEVT 180
Query: 254 GQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
GQ ++KI DTDRD FMS ++AK+YGLID V+
Sbjct: 181 GQPVDKIARDTDRDNFMSGDQAKEYGLIDKVL 212
>gi|121611285|ref|YP_999092.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Verminephrobacter eiseniae EF01-2]
gi|166214720|sp|A1WR17.1|CLPP_VEREI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|121555925|gb|ABM60074.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Verminephrobacter eiseniae EF01-2]
Length = 202
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 149/192 (77%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
QG G PM++ GR + ++ S+L + R+I GPV D AN++VAQLL+L++ +P+K
Sbjct: 7 QGLGMIPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDQTANLVVAQLLFLESENPDK 66
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI Y+NSPGGSV+AGMAIFDT+ I+PDVST+C G+AASMGAFLL+AG KGKR++LPNS
Sbjct: 67 DISFYINSPGGSVSAGMAIFDTMNFIKPDVSTLCTGMAASMGAFLLAAGAKGKRFALPNS 126
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
++MIHQPLGG QG ++I++ A E+L + LN L+ TGQ LEKI DT+RD+F+SA+
Sbjct: 127 KVMIHQPLGGMQGQATEIEIHAREILKTREQLNKILAERTGQPLEKIQRDTERDYFLSAD 186
Query: 274 EAKDYGLIDGVV 285
E+++YGL+D V+
Sbjct: 187 ESREYGLVDQVI 198
>gi|71281884|ref|YP_270452.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Colwellia
psychrerythraea 34H]
gi|110816457|sp|Q47XL8.1|CLPP_COLP3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|71147624|gb|AAZ28097.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Colwellia
psychrerythraea 34H]
Length = 220
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+I+AQLL+L++ P+KDI +Y+NSPGGSVTAGM
Sbjct: 40 RSYDIYSRLLKERVIFLCGQVEDHMANLIIAQLLFLESESPDKDIYLYINSPGGSVTAGM 99
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+P++STVC+G AASMGAFLLS G KGKRY LPN+R+MIHQPLGG QG SD
Sbjct: 100 AIYDTMKFIKPNISTVCIGQAASMGAFLLSGGEKGKRYCLPNARVMIHQPLGGFQGQASD 159
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
++ A E+L K LN ++ HTGQTL+K+++DTDRD F+SAE A +YGL+D ++
Sbjct: 160 FEIHAKEILFIKDKLNKLMAEHTGQTLDKVSQDTDRDNFLSAEAAVEYGLVDSIL 214
>gi|373467005|ref|ZP_09558311.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus sp. oral taxon 851 str. F0397]
gi|371759511|gb|EHO48238.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus sp. oral taxon 851 str. F0397]
Length = 193
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 140/177 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L++ DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDINIYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PD+ T+C+G A SMGAFLL+ GT GKR +LPN+R+MIHQPLGG +G SD
Sbjct: 76 AIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVMIHQPLGGFRGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I + A E+L K LN L++HTGQ++E+I +DTDRD FMSAEEAK YGL+D +++
Sbjct: 136 IQIHAQEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEAKAYGLVDEILIK 192
>gi|148241165|ref|YP_001226322.1| protease subunit of ATP-dependent Clp protease [Synechococcus sp.
RCC307]
gi|147849475|emb|CAK26969.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
RCC307]
Length = 207
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 141/177 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D +A+ +VAQLLYL+A DP K+I +Y+NSPGGSVTAG+
Sbjct: 31 RAFDIYSRLLRERIIFLGTGIDDAIADAVVAQLLYLEAEDPEKEIQIYVNSPGGSVTAGL 90
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ + PDV T+C GLAASMGAFLLS GTKGKR +LPN+RIMIHQPLGGAQG D
Sbjct: 91 AIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVD 150
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++QA E+L+ K LNG ++ HTGQ L K++EDTDRD+F+S +EA YGLID VV +
Sbjct: 151 IEIQAKEILYLKETLNGLMASHTGQDLAKVSEDTDRDYFLSPDEAVAYGLIDRVVRD 207
>gi|118444381|ref|YP_878863.1| ATP-dependent Clp protease proteolytic subunit [Clostridium novyi
NT]
gi|166201817|sp|A0Q2L1.1|CLPP_CLONN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118134837|gb|ABK61881.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
novyi NT]
Length = 195
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/180 (60%), Positives = 140/180 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D A+++VAQLL+L+A DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RSYDIYSRLLKDRIIFLGEEVNDVTASLVVAQLLFLEAEDPDKDIYLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G+AASMGAFLL+AG KGKR++LPNS IMIHQPLGG QG +D
Sbjct: 76 AIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEIMIHQPLGGFQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I + AN +L K LN LS TGQ LE I +D +RD FM AEEAK+YGLID V+ + K
Sbjct: 136 IGIHANRILKIKDKLNSILSERTGQPLEVIKKDVERDNFMEAEEAKEYGLIDDVITSRKK 195
>gi|322418659|ref|YP_004197882.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M18]
gi|320125046|gb|ADW12606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M18]
Length = 199
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GG ++D++AN+++AQLL+L+A DP+KDI +Y+NSPGG VTAGM
Sbjct: 15 RSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGM 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+R+I+ VST+C+G AASMGAFLLS G KGKR+SL NSRIMIHQPLGG QG +D
Sbjct: 75 AIYDTMRYIKAPVSTICIGQAASMGAFLLSGGEKGKRFSLANSRIMIHQPLGGFQGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ HTGQ+ EK+ DT+RD+FMS EEAK YG+ID +V
Sbjct: 135 IHIHAKEILRMKDQLNELLAEHTGQSFEKVAADTERDYFMSGEEAKSYGIIDAIV 189
>gi|418632534|ref|ZP_13194964.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU128]
gi|374832104|gb|EHR95824.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU128]
Length = 194
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 141/180 (78%), Gaps = 1/180 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIHHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ AN +L + LN LS TGQ++EKI +DTDRD F++A EAK+YGLID VM P K
Sbjct: 136 IEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAAEAKEYGLIDE-VMEPEK 194
>gi|169824905|ref|YP_001692516.1| ATP-dependent protease Clp proteolytic subunit [Finegoldia magna
ATCC 29328]
gi|297587291|ref|ZP_06945936.1| ATP-dependent Clp protease proteolytic subunit [Finegoldia magna
ATCC 53516]
gi|302379561|ref|ZP_07268046.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia
magna ACS-171-V-Col3]
gi|303234189|ref|ZP_07320835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia
magna BVS033A4]
gi|417926693|ref|ZP_12570084.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia
magna SY403409CC001050417]
gi|167831710|dbj|BAG08626.1| ATP-dependent protease Clp proteolytic subunit [Finegoldia magna
ATCC 29328]
gi|297575272|gb|EFH93991.1| ATP-dependent Clp protease proteolytic subunit [Finegoldia magna
ATCC 53516]
gi|302312468|gb|EFK94464.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia
magna ACS-171-V-Col3]
gi|302494730|gb|EFL54490.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia
magna BVS033A4]
gi|341588445|gb|EGS31843.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia
magna SY403409CC001050417]
Length = 195
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D MA++++AQLL+L++ DP KDI +Y+NSPGGSV+AG+
Sbjct: 17 RSYDIFSRLLKERIIFVTGEVNDQMADLVIAQLLFLESEDPKKDIQLYINSPGGSVSAGL 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++++PDVST+CVG+AASMGA LL++G KGKRY+LPN+ +IHQPLGGAQG SD
Sbjct: 77 AIYDTMQYVKPDVSTICVGMAASMGAILLTSGAKGKRYALPNADTLIHQPLGGAQGQASD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +L + LN LS TGQ LEKI DTDRDF ++AEEAK+YGLID V+
Sbjct: 137 IEIHAKNILKKRELLNKILSERTGQPLEKIERDTDRDFILTAEEAKEYGLIDEVI 191
>gi|254525962|ref|ZP_05138014.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9202]
gi|221537386|gb|EEE39839.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9202]
Length = 214
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G + D +++ +VAQLL+L+A DP KDI +Y+NSPGGSVTAGM
Sbjct: 38 RAFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPEKDIQIYINSPGGSVTAGM 97
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I PDV T+C G+AASMGAFLLS G KGKR +LPNSRIMIHQPLGGAQG +
Sbjct: 98 AIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGAQGQAVE 157
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L K LN L+ HTGQ LEKINEDT+RD+F+S EA +YGLID V+
Sbjct: 158 IEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSEAVEYGLIDKVI 212
>gi|428299969|ref|YP_007138275.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
gi|428236513|gb|AFZ02303.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
Length = 198
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 142/172 (82%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ ++LF RII G V+DD+AN I+A++LYLD+ DP KDII+Y+NSPGGSV+AG+AIF
Sbjct: 22 DIYNRLFLERIIFLGREVDDDIANKIIAEMLYLDSEDPGKDIILYINSPGGSVSAGLAIF 81
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HI+ DV+T+CVGLAASMG+FLL+AGTKGKR +LP+SRIMIHQP GG +G +DI++
Sbjct: 82 DTMQHIKSDVATICVGLAASMGSFLLTAGTKGKRLALPHSRIMIHQPSGGTRGQATDIEI 141
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
+A E++ + LN + TGQTL+KI +D DRDFFMSA EAK+YGL+D V+
Sbjct: 142 EAREIIRIRHQLNNIYANTTGQTLQKIEKDMDRDFFMSAAEAKEYGLVDRVI 193
>gi|359396721|ref|ZP_09189772.1| ATP-dependent Clp protease proteolytic subunit [Halomonas
boliviensis LC1]
gi|357969399|gb|EHJ91847.1| ATP-dependent Clp protease proteolytic subunit [Halomonas
boliviensis LC1]
Length = 205
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 109/193 (56%), Positives = 146/193 (75%), Gaps = 6/193 (3%)
Query: 99 EQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPN 152
+ GG PM++ R ++ S+L + R+I GPVED MAN++VAQLL+L++ +P+
Sbjct: 7 QNAGGLVPMVVEQSAKGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLESENPD 66
Query: 153 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 212
KDI +Y+NSPGGSVTAGM+I+DT++ ++PDVSTVC+G AASMGA LL+AG GKRY LPN
Sbjct: 67 KDIHLYINSPGGSVTAGMSIYDTMQFVKPDVSTVCIGQAASMGALLLTAGAAGKRYCLPN 126
Query: 213 SRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSA 272
SR+MIHQPLGG QG SDI++ E+L + LN L++HTGQ +E ++ DTDRD FMSA
Sbjct: 127 SRVMIHQPLGGYQGQASDIEIHTREILGIREKLNQILAHHTGQDIEAVSRDTDRDNFMSA 186
Query: 273 EEAKDYGLIDGVV 285
AK+YGLID V+
Sbjct: 187 NTAKEYGLIDAVL 199
>gi|226311381|ref|YP_002771275.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
gi|226094329|dbj|BAH42771.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
Length = 193
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN+IVAQLL+L A DP+KDI +Y+NSPGGSVTAGM
Sbjct: 15 RSYDIYSRLLKDRIILLGTEIDDEIANLIVAQLLFLQAEDPDKDISLYINSPGGSVTAGM 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG+AASMGAFLL+AG KGKR++LPN+ +MIHQPLGG +G D
Sbjct: 75 AIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNAEVMIHQPLGGVRGQAED 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A ++ K LN LS TGQ E++ +DTDRD FMSAEEAK YGLID ++
Sbjct: 135 IRIHAEWIMKTKRQLNEILSERTGQPYERVEQDTDRDNFMSAEEAKAYGLIDSII 189
>gi|335041121|ref|ZP_08534237.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
gi|334178919|gb|EGL81568.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
Length = 196
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +AN ++AQLL+L A DP KD+ +Y+NSPGGSVTAG+
Sbjct: 16 RAYDIYSRLLKDRIIFLGTPIDDHVANSVIAQLLFLAAEDPEKDVSLYINSPGGSVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVGLAASMG+FLL+AG KGKR++LPNS IM+HQPLGG +G +D
Sbjct: 76 AIYDTMQYIKPDVSTICVGLAASMGSFLLAAGAKGKRFALPNSEIMMHQPLGGVKGQAAD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A+ ++ K LN + TGQ +EKI DTDRDFFMSAEEAK+YGL+D V+
Sbjct: 136 IKIHADWIIKTKQKLNRIYAERTGQPVEKIERDTDRDFFMSAEEAKEYGLVDQVI 190
>gi|313683647|ref|YP_004061385.1| ATP-dependent clp protease proteolytic subunit clpp [Sulfuricurvum
kujiense DSM 16994]
gi|313156507|gb|ADR35185.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sulfuricurvum
kujiense DSM 16994]
Length = 198
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 114/200 (57%), Positives = 148/200 (74%), Gaps = 7/200 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
YIP Y + G G R ++ S+L + RII G V D +A+ IVAQLL+L+A D
Sbjct: 3 YIP-YVIEKTGRGE------RSYDIYSRLLKDRIIMLSGEVNDPVASSIVAQLLFLEAED 55
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P KDI Y+NSPGG +T+GMAIFDT+ +IRPDV T+C+G AASMGAFLLS+GTKGKRY+L
Sbjct: 56 PAKDIYFYINSPGGVITSGMAIFDTMNYIRPDVCTICIGQAASMGAFLLSSGTKGKRYAL 115
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
P++RIMIHQPLGGAQG +DI++QA E+L KA LN L+ + GQ+++K+ +DTDRD FM
Sbjct: 116 PHARIMIHQPLGGAQGQATDIEIQAKEILRMKAELNEILAKNCGQSVKKLEKDTDRDNFM 175
Query: 271 SAEEAKDYGLIDGVVMNPHK 290
SA EA YG+ID V++ K
Sbjct: 176 SAAEAVTYGIIDEVLVQKEK 195
>gi|313887837|ref|ZP_07821517.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846180|gb|EFR33561.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Peptoniphilus harei ACS-146-V-Sch2b]
Length = 194
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D MA++IVAQLL+L+A DPNKDI +Y+NSPGGSV+AG
Sbjct: 16 RSYDIYSRLLKDRIIFLSGEVNDTMADLIVAQLLFLEAEDPNKDIQLYINSPGGSVSAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ +I+PDVST+C+G+AASMGAFLL++G KGKR++LPNS IMIHQP GGAQG SD
Sbjct: 76 AIYDTMNYIKPDVSTICIGMAASMGAFLLASGAKGKRFALPNSDIMIHQPSGGAQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A ++L + LN L+ TGQ LEKI +DTDRD++++++EAKDYGLID V+
Sbjct: 136 IQINAEKILKIRHKLNEILAERTGQDLEKIEKDTDRDYWLNSQEAKDYGLIDKVI 190
>gi|187928950|ref|YP_001899437.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia pickettii
12J]
gi|241663134|ref|YP_002981494.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia pickettii
12D]
gi|309781948|ref|ZP_07676679.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ralstonia sp.
5_7_47FAA]
gi|404377636|ref|ZP_10982736.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia sp.
5_2_56FAA]
gi|187725840|gb|ACD27005.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ralstonia
pickettii 12J]
gi|240865161|gb|ACS62822.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ralstonia
pickettii 12D]
gi|308919292|gb|EFP64958.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ralstonia sp.
5_7_47FAA]
gi|348611501|gb|EGY61146.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia sp.
5_2_56FAA]
Length = 215
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 157/212 (74%), Gaps = 7/212 (3%)
Query: 80 IRNDLEVPSSPYIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVED 133
IRN+L + A QG G PM++ R ++ S+L + R+I G V D
Sbjct: 2 IRNEL-IDQLARTQASALETQGLGLVPMVVEQSGRGERAYDIYSRLLKERVIFMVGEVND 60
Query: 134 DMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAAS 193
AN++VAQLL+L++ +P+KDI +Y+NSPGGSV++G+A++DT++ I+PDVST+C+G+AAS
Sbjct: 61 QTANLVVAQLLFLESENPDKDISLYINSPGGSVSSGLAMYDTMQFIKPDVSTLCMGMAAS 120
Query: 194 MGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHT 253
MGAFLL+AG KGKR +LPNSRIMIHQPLGGA+G SDI++QA E+L+ + LN LS T
Sbjct: 121 MGAFLLAAGAKGKRLALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNTVLSEVT 180
Query: 254 GQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
GQ ++KI DTDRD FMS+E+AK+YGLID V+
Sbjct: 181 GQPVDKIARDTDRDNFMSSEQAKEYGLIDQVI 212
>gi|237747781|ref|ZP_04578261.1| ATP-dependent Clp protease proteolytic subunit [Oxalobacter
formigenes OXCC13]
gi|229379143|gb|EEO29234.1| ATP-dependent Clp protease proteolytic subunit [Oxalobacter
formigenes OXCC13]
Length = 207
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 143/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ GPV D AN+IVAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 29 RAYDIYSRLLKERIVFLVGPVMDQNANLIVAQLLFLESENPDKDISLYINSPGGSVSAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+P VST+C GLAASMGAFLL+AG KGKR+SLPNSRIMIHQP GGAQG +D
Sbjct: 89 AIYDTMQFIKPQVSTLCTGLAASMGAFLLAAGEKGKRFSLPNSRIMIHQPSGGAQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L+ + LNG L+ +TG+++E++ DT+RD FMSA EAKDYGLID V+
Sbjct: 149 IEIHAREILYLRERLNGILADNTGKSIEQVARDTERDNFMSANEAKDYGLIDDVL 203
>gi|254197976|ref|ZP_04904398.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei S13]
gi|169654717|gb|EDS87410.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei S13]
Length = 217
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 144/174 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 39 RSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 98
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ ++PDVST+C+GLAASMGAFLL++G +GKRY+LPN+R+MIHQPLGGA+G SD
Sbjct: 99 AIYDTMQFVKPDVSTLCMGLAASMGAFLLASGARGKRYALPNARVMIHQPLGGARGQASD 158
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++QA E+L+ + LN L++HTGQ +E+I DTDRD FMS+E+AK YGLID V
Sbjct: 159 IEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 212
>gi|332305574|ref|YP_004433425.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Glaciecola
sp. 4H-3-7+YE-5]
gi|410641918|ref|ZP_11352437.1| ATP-dependent Clp protease, protease subunit [Glaciecola
chathamensis S18K6]
gi|410646705|ref|ZP_11357155.1| ATP-dependent Clp protease, protease subunit [Glaciecola
agarilytica NO2]
gi|332172903|gb|AEE22157.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Glaciecola
sp. 4H-3-7+YE-5]
gi|410133877|dbj|GAC05554.1| ATP-dependent Clp protease, protease subunit [Glaciecola
agarilytica NO2]
gi|410138820|dbj|GAC10624.1| ATP-dependent Clp protease, protease subunit [Glaciecola
chathamensis S18K6]
Length = 212
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 137/177 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + +I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKENVIFMVGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDVSTVC+G AASMGAFLLS GTKGKRY LPN+R+MIHQPLGG QG SD
Sbjct: 85 AIYDTMNFIKPDVSTVCIGQAASMGAFLLSGGTKGKRYCLPNARVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
++ A E+L K +N ++ HTGQ EK+ DTDRD F+SA+E+ DYGL+D V+ N
Sbjct: 145 FEIHAKEILSIKEKMNRLMAEHTGQDYEKVARDTDRDNFLSAQESVDYGLVDQVLAN 201
>gi|121534156|ref|ZP_01665981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosinus
carboxydivorans Nor1]
gi|121307259|gb|EAX48176.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosinus
carboxydivorans Nor1]
Length = 203
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 102/177 (57%), Positives = 144/177 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ GGP++D +AN+++AQLL+L++ DP+KDI +Y+NSPGG VTAG+
Sbjct: 16 RAYDIYSRLLKDRIVFIGGPIDDHVANLVIAQLLFLESEDPDKDIHLYINSPGGVVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G AASM A LL+AG GKRY+LP +R+MIHQPLGGAQG +D
Sbjct: 76 AIYDTMQYIKPDVSTICLGSAASMAAVLLAAGAPGKRYALPYARVMIHQPLGGAQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I +QA E+L + LN L+ HTG+ LE+I DT+RD+FMS+EEAK+YG+ID VV+
Sbjct: 136 IQIQAREILRLREILNDILARHTGKPLERIQHDTERDYFMSSEEAKEYGIIDAVVVR 192
>gi|239636619|ref|ZP_04677621.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus warneri L37603]
gi|239597974|gb|EEQ80469.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus warneri L37603]
Length = 196
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/179 (58%), Positives = 141/179 (78%), Gaps = 1/179 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKRY+LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRYALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPH 289
I++ AN +L + LN L+ TGQ++EKI +DTDRD F++AEEAK YGL+D VM P
Sbjct: 136 IEIAANHILKTREKLNRILAERTGQSIEKIQQDTDRDNFLTAEEAKAYGLVDE-VMEPE 193
>gi|422016474|ref|ZP_16363057.1| ATP-dependent Clp protease proteolytic subunit [Providencia
burhodogranariea DSM 19968]
gi|414092673|gb|EKT54346.1| ATP-dependent Clp protease proteolytic subunit [Providencia
burhodogranariea DSM 19968]
Length = 206
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 102/174 (58%), Positives = 141/174 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIQLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AGTKGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++ A E+L K+ +N ++ HTG+++E+IN DT+RD F+SA EAK+YGL+D +
Sbjct: 149 IEIHAQEILKVKSRMNELMALHTGKSIEEINRDTERDRFLSANEAKEYGLVDQI 202
>gi|453062436|gb|EMF03427.1| ATP-dependent Clp protease proteolytic subunit [Serratia marcescens
VGH107]
Length = 207
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAESPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMG+FLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMKFIKPDVSTICMGQACSMGSFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ HTGQ LE+I DT+RD FM+AEEA +YGL+DG++
Sbjct: 149 IEIHAREILKVKARMNELMAEHTGQPLEQIERDTERDRFMTAEEAVEYGLVDGIL 203
>gi|156935010|ref|YP_001438926.1| hypothetical protein ESA_02861 [Cronobacter sakazakii ATCC BAA-894]
gi|156533264|gb|ABU78090.1| hypothetical protein ESA_02861 [Cronobacter sakazakii ATCC BAA-894]
Length = 194
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 16 RSYDIFSRLLKERIIFLTGQVEDQMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G AASMGAFLL+AGTKGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 76 SIYDTMQFIQPDVSTICMGQAASMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ HTGQ LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 136 IEIHAREILKVKARMNELMAQHTGQPLEQIERDTERDRFLSAGEAVEYGLVDSIM 190
>gi|260222837|emb|CBA32804.1| ATP-dependent Clp protease proteolytic subunit [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 220
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPV D AN++VAQLL+L++ +P+KDI Y+NSPGGSV+AGM
Sbjct: 42 RSYDIYSRLLKERVIFLVGPVNDQTANLVVAQLLFLESENPDKDISFYINSPGGSVSAGM 101
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDVST+C G+AASMGAFLL+AG KGKR+SLPNS++MIHQPLGG QG ++
Sbjct: 102 AIYDTMNFIKPDVSTLCTGMAASMGAFLLAAGAKGKRFSLPNSKVMIHQPLGGTQGQATE 161
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L + LN L+ TGQ LEKI DT+RD+++SA+EAK+YGL+D V+
Sbjct: 162 IEIHAREILKTREQLNKILAERTGQPLEKIERDTERDYYLSADEAKEYGLVDQVI 216
>gi|350425874|ref|XP_003494260.1| PREDICTED: hypothetical protein LOC100749102 [Bombus impatiens]
Length = 2402
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 101/176 (57%), Positives = 141/176 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED+MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +T+GM
Sbjct: 451 RAYDIYSRLLKERVIFLNGQVEDNMANLIVAQMLFLEAENPEKDIYLYINSPGGVITSGM 510
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR+ LPN+R+MIHQPLGG QG +D
Sbjct: 511 SIYDTMQFIKPDVSTICLGQACSMGAFLLTAGAKGKRFCLPNARVMIHQPLGGYQGQATD 570
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVM 286
I + A EML K +N +++HTG++++ I +DTDRD FMSA+EA DYGLIDG ++
Sbjct: 571 IQIHAEEMLKVKRRMNELMAHHTGKSIKTIEKDTDRDNFMSAKEAMDYGLIDGKML 626
>gi|83589392|ref|YP_429401.1| ATP-dependent Clp protease proteolytic subunit [Moorella
thermoacetica ATCC 39073]
gi|115311785|sp|Q2RL31.1|CLPP_MOOTA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|83572306|gb|ABC18858.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorella
thermoacetica ATCC 39073]
Length = 199
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D +AN+++AQ+L+L+A DP+KDI +Y+NSPGGS++AGM
Sbjct: 17 RAYDIYSRLLKDRIIFLGSAIDDHVANLVIAQMLFLEAEDPDKDIHLYINSPGGSISAGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT+++IRPDVST+CVGLAASMGAFLL+AG KGKR++LPNS IMIHQP+GG QG D
Sbjct: 77 AIFDTMQYIRPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSEIMIHQPMGGTQGQAVD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +L + NLN LS TG+ LE+I DTDRD FM+A EA++YGLID V+
Sbjct: 137 IEIHAKRILAIRDNLNRILSEITGKPLEQIARDTDRDHFMTAREAREYGLIDEVI 191
>gi|410621864|ref|ZP_11332707.1| ATP-dependent Clp protease, protease subunit [Glaciecola pallidula
DSM 14239 = ACAM 615]
gi|410158621|dbj|GAC28081.1| ATP-dependent Clp protease, protease subunit [Glaciecola pallidula
DSM 14239 = ACAM 615]
Length = 210
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 106/183 (57%), Positives = 140/183 (76%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + +I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKENVIFMVGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDVSTVC+G AASMGAFLLSAG K KRY LPN+R+MIHQPLGG QG SD
Sbjct: 85 AIYDTMNFIKPDVSTVCIGQAASMGAFLLSAGAKAKRYCLPNARVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
++ A E+L K +N ++ HTGQ EK+ +DTDRD F+SA+++ DYGL+D V+ N
Sbjct: 145 FEIHAKEILSIKEKMNRLMAKHTGQDYEKVAKDTDRDNFLSAQDSVDYGLVDAVMTNRAD 204
Query: 291 ILQ 293
+L+
Sbjct: 205 VLK 207
>gi|402783520|ref|YP_006638850.1| ATP-dependent Clp protease proteolytic subunit ClpP [Helicobacter
cinaedi PAGU611]
gi|386780103|dbj|BAM14961.1| ATP-dependent Clp protease proteolytic subunit ClpP [Helicobacter
cinaedi PAGU611]
Length = 196
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 141/180 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G + D +A+ IVAQLL+L+A DP+KDI Y+NSPGG +T+
Sbjct: 17 RSYDIYSRLLKDRIILLSGEINDHIASSIVAQLLFLEAEDPDKDINFYINSPGGVITSAF 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ +IR D+ST+C+G AAS GAFLLS+GTKGKR+SLPNSRIMIHQPLGGAQG +D
Sbjct: 77 SIYDTMNYIRSDISTICIGQAASAGAFLLSSGTKGKRFSLPNSRIMIHQPLGGAQGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L K LN ++ +TGQ++EKI +DT+RDFFMS EEAKDYGL+D ++ K
Sbjct: 137 IEIQAKEILRLKKILNEIMAENTGQSVEKITQDTERDFFMSGEEAKDYGLVDKILTKSLK 196
>gi|264677387|ref|YP_003277293.1| ATP-dependent Clp protease proteolytic subunit [Comamonas
testosteroni CNB-2]
gi|299533085|ref|ZP_07046471.1| ATP-dependent Clp protease, proteolytic subunit [Comamonas
testosteroni S44]
gi|262207899|gb|ACY31997.1| ATP-dependent Clp protease, proteolytic subunit [Comamonas
testosteroni CNB-2]
gi|298718970|gb|EFI59941.1| ATP-dependent Clp protease, proteolytic subunit [Comamonas
testosteroni S44]
Length = 202
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 108/191 (56%), Positives = 148/191 (77%), Gaps = 6/191 (3%)
Query: 101 GGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKD 154
G G PM++ GR + ++ S+L + R+I G V D AN++VAQLL+L++ +P+KD
Sbjct: 8 GLGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLESENPDKD 67
Query: 155 IIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSR 214
I Y+NSPGGSVTAGMAIFDT+ I+PDVST+C G+AASMGAFLLSAG KGKRY+LPN++
Sbjct: 68 ISFYINSPGGSVTAGMAIFDTMNFIKPDVSTLCTGMAASMGAFLLSAGAKGKRYALPNAQ 127
Query: 215 IMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEE 274
+MIHQPLGGA+G ++I++ A E++ + LN L+ TGQ LEKI DT+RD+F+SA+E
Sbjct: 128 VMIHQPLGGARGQATEIEIHAREIIKTRERLNKILAERTGQPLEKIQNDTERDYFLSADE 187
Query: 275 AKDYGLIDGVV 285
AK+YGL+D V+
Sbjct: 188 AKEYGLVDQVI 198
>gi|222528715|ref|YP_002572597.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor bescii DSM 6725]
gi|312622971|ref|YP_004024584.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor kronotskyensis 2002]
gi|222455562|gb|ACM59824.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor bescii DSM 6725]
gi|312203438|gb|ADQ46765.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor kronotskyensis 2002]
Length = 195
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G + DD+A++IVAQLL+L+A DP+KDI +Y+NSPGGSVTAG
Sbjct: 17 RAYDIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPGGSVTAGF 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVGLAASMGAFLL+AG KGKR++LPNS IMIHQPLGG +G +D
Sbjct: 77 AIYDTMQYIKPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGVRGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A +L K +N LS TGQ +E I DTDRDFFM+AEEA YG+ID V+
Sbjct: 137 IKIHAEWILKIKNRINKILSERTGQPIEVIERDTDRDFFMTAEEALKYGIIDKVI 191
>gi|398815689|ref|ZP_10574354.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
gi|398034174|gb|EJL27450.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
Length = 193
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN++VAQLL+L A DP+KDI +Y+NSPGGSVTAGM
Sbjct: 15 RSYDIYSRLLKDRIILLGTEIDDEIANLVVAQLLFLQAEDPDKDISLYINSPGGSVTAGM 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG+AASMGAFLL+AG KGKR++LPN+ +MIHQPLGG +G D
Sbjct: 75 AIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNAEVMIHQPLGGVRGQAED 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A ++ K LN LS TGQ E++ +DTDRD FMSAEEAK YGLID ++
Sbjct: 135 IRIHAEWIMKTKRQLNEILSERTGQPYERVEQDTDRDNFMSAEEAKAYGLIDSII 189
>gi|254282219|ref|ZP_04957187.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium NOR51-B]
gi|219678422|gb|EED34771.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium NOR51-B]
Length = 220
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 141/174 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G +ED MAN+IVAQLL+L++ +P+KDI +Y+NSPGGSVTAG++I+
Sbjct: 40 DIYSRLLKERVIFVVGGIEDHMANLIVAQLLFLESENPDKDIHIYINSPGGSVTAGLSIY 99
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ ++PDVST+C+G AASMGAFLLS G KGKRY LPN+R MIHQP GGAQG SDI++
Sbjct: 100 DTMQFVKPDVSTMCIGQAASMGAFLLSGGAKGKRYILPNARTMIHQPSGGAQGQASDIEI 159
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
QA E+L+ + LN ++ HTGQTLE I DT+RD FMSAE++ +YGL+D VV N
Sbjct: 160 QAKEILYLRERLNRLMADHTGQTLETIERDTERDRFMSAEQSVEYGLVDEVVEN 213
>gi|342216862|ref|ZP_08709509.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 375 str. F0436]
gi|341587752|gb|EGS31152.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 375 str. F0436]
Length = 194
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D MA++IVAQLL+L++ DP+KDI +Y+NSPGGSV+AG
Sbjct: 16 RSYDIYSRLLKERIIFLSGEVNDVMADLIVAQLLFLESEDPDKDIQIYINSPGGSVSAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G+AASMGAFLL+AGT GKRY+LPN+ IMIHQPLGGAQG SD
Sbjct: 76 AIYDTMQYIKPDVSTICIGMAASMGAFLLAAGTIGKRYALPNADIMIHQPLGGAQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A ++L + LN LS TG++ E+I+ DTDRDF+M+A+EA DYGLID VV
Sbjct: 136 IKIHAEKILKTRERLNRILSDRTGKSYEQIDLDTDRDFYMTADEAVDYGLIDKVV 190
>gi|242373003|ref|ZP_04818577.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W1]
gi|242349329|gb|EES40930.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W1]
Length = 195
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 105/179 (58%), Positives = 141/179 (78%), Gaps = 1/179 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPH 289
I++ AN +L + LN L+ TGQ++EKI +DTDRD F++AEEAK YGLID VM P
Sbjct: 136 IEIAANHILKTREKLNRILAERTGQSIEKIQQDTDRDNFLTAEEAKSYGLIDE-VMEPE 193
>gi|429089532|ref|ZP_19152264.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
universalis NCTC 9529]
gi|429122487|ref|ZP_19183064.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii 680]
gi|426322955|emb|CCK13801.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii 680]
gi|426509335|emb|CCK17376.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
universalis NCTC 9529]
Length = 189
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 11 RSYDIFSRLLKERIIFLTGQVEDQMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 70
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G AASMGAFLL+AGTKGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 71 SIYDTMQFIQPDVSTICMGQAASMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATD 130
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ HTGQ LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 131 IEIHAREILKVKARMNELMAQHTGQPLEQIERDTERDRFLSAGEAVEYGLVDSIM 185
>gi|319789118|ref|YP_004150751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovibrio
ammonificans HB-1]
gi|317113620|gb|ADU96110.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovibrio
ammonificans HB-1]
Length = 200
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G P++D +AN+IVAQLL+L+A DP KDI +Y+NSPGG VTAG+
Sbjct: 21 RAYDIYSRLLKDRIVMLGTPIDDHVANLIVAQLLFLEAEDPEKDIYLYINSPGGVVTAGL 80
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDV T+C+G AASMGA LL+AG KGKR++LP++RIMIHQPLGG QG +D
Sbjct: 81 AIYDTMQYIKPDVVTICMGQAASMGAVLLAAGAKGKRFALPHARIMIHQPLGGFQGQATD 140
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L K LN L+ HT Q +EK+ +DT+RD+FMSAEEAK+YGLID V+
Sbjct: 141 IEIHAKEILRLKRMLNEILAKHTRQPVEKVEQDTERDYFMSAEEAKEYGLIDKVL 195
>gi|186475776|ref|YP_001857246.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
phymatum STM815]
gi|390571699|ref|ZP_10251936.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia terrae
BS001]
gi|420250357|ref|ZP_14753576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. BT03]
gi|184192235|gb|ACC70200.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
phymatum STM815]
gi|389936313|gb|EIM98204.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia terrae
BS001]
gi|398061216|gb|EJL53014.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. BT03]
Length = 219
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 143/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R++ G V D AN+++AQLL+L++ +P+KDI Y+NSPGGSV+AGM
Sbjct: 41 RSYDIYSRLLKERVVFLVGEVNDQTANLVIAQLLFLESENPDKDISFYINSPGGSVSAGM 100
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C+GLAASMGAFLL+AG KGKR++LPN+R+MIHQPLGGA+G SD
Sbjct: 101 AIYDTMQFIKPDVSTLCMGLAASMGAFLLAAGAKGKRFALPNARVMIHQPLGGARGQASD 160
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN LS+HTGQ +E+I DTDRD FMS ++A+ YGL+D V+
Sbjct: 161 IEIQAREILYLKERLNQLLSHHTGQPVERIQRDTDRDNFMSGDDAQAYGLVDQVL 215
>gi|417644372|ref|ZP_12294370.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus warneri VCU121]
gi|445060249|ref|YP_007385653.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
warneri SG1]
gi|330684877|gb|EGG96562.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU121]
gi|443426306|gb|AGC91209.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
warneri SG1]
Length = 196
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 105/179 (58%), Positives = 140/179 (78%), Gaps = 1/179 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKRY+LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRYALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPH 289
I++ AN +L + LN S TGQ++EKI +DTDRD F++AEEAK YGL+D VM P
Sbjct: 136 IEIAANHILKTREKLNRIFSERTGQSIEKIQQDTDRDNFLTAEEAKAYGLVDE-VMEPE 193
>gi|217077313|ref|YP_002335031.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
africanus TCF52B]
gi|419759889|ref|ZP_14286174.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
africanus H17ap60334]
gi|217037168|gb|ACJ75690.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosipho
africanus TCF52B]
gi|407514928|gb|EKF49714.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
africanus H17ap60334]
Length = 201
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G ++D +AN++VAQLL+L+A DP+KDI +Y+NSPGGSV+AG+
Sbjct: 21 RAYDIYSRLLKDRIVFLGSAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPGGSVSAGL 80
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+ DV+T+C+G AASMGA LL+ GTKGKR+SLPNSRIMIHQPLGGA+G D
Sbjct: 81 AIYDTMQYIKCDVATICIGQAASMGAVLLAGGTKGKRFSLPNSRIMIHQPLGGAEGPAKD 140
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
+++ E+L K +N LS+HTGQ +E+I +DTDRDFFM+ EEA +YGLID V+
Sbjct: 141 VEIMTKELLRIKNKINEILSFHTGQPIERIEKDTDRDFFMTPEEALEYGLIDKVI 195
>gi|388468796|ref|ZP_10143006.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
synxantha BG33R]
gi|388012376|gb|EIK73563.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
synxantha BG33R]
Length = 211
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 149/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG +
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAE 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKR+ LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G TLE+I DT
Sbjct: 126 GKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGHTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE A++YGLID V+
Sbjct: 186 NRDNFMSAEAAREYGLIDAVI 206
>gi|365969260|ref|YP_004950821.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae EcWSU1]
gi|365748173|gb|AEW72400.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae EcWSU1]
Length = 233
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 58 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 117
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 118 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 177
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L KA +N ++ HTGQ+LE+I DT+RD F+SA EA +YGL+D V+
Sbjct: 178 HAREILKVKARMNELMAQHTGQSLEQIERDTERDRFLSASEAVEYGLVDSVL 229
>gi|70727122|ref|YP_254036.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
haemolyticus JCSC1435]
gi|124013829|sp|Q4L4J5.1|CLPP_STAHJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|68447846|dbj|BAE05430.1| clpP [Staphylococcus haemolyticus JCSC1435]
Length = 195
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 142/179 (79%), Gaps = 1/179 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPH 289
I++ AN +L + LN L+ TGQ++EKI +DTDRD F++A+EAK+YGLID VM P
Sbjct: 136 IEIAANHILKTREKLNKILAERTGQSIEKIQKDTDRDNFLTADEAKEYGLIDN-VMQPE 193
>gi|224475912|ref|YP_002633518.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
carnosus subsp. carnosus TM300]
gi|254763800|sp|B9DJL4.1|CLPP_STACT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|222420519|emb|CAL27333.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus carnosus subsp. carnosus TM300]
Length = 194
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 143/180 (79%), Gaps = 1/180 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ A +L +A LN L+ TGQ++E+I +DTDRD F++A+EAK+YGLID VM P K
Sbjct: 136 IEIAATHILKTRAKLNKILAERTGQSIEQIEKDTDRDNFLTADEAKEYGLIDE-VMQPEK 194
>gi|395225605|ref|ZP_10404124.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiovulum sp.
ES]
gi|394446228|gb|EJF07066.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiovulum sp.
ES]
Length = 197
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 114/201 (56%), Positives = 148/201 (73%), Gaps = 8/201 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
YIP Y + G G R ++ S+L + RI+ G V D +A+ IVAQLL+L+A D
Sbjct: 3 YIP-YVVEKSGRGE------RSYDIYSRLLKDRIVMLSGEVNDAVASSIVAQLLFLEAED 55
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P KDI Y+NSPGG +T+GM+I+DT+ +I+P VST+C+G AASMGAFLLSAG KGKRY+L
Sbjct: 56 PEKDIYFYINSPGGVITSGMSIYDTMNYIKPQVSTICIGQAASMGAFLLSAGEKGKRYAL 115
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
PN+RIMIHQPLGGA+G +DI +QA E+L K +LN LS +TGQ++E I DT+RD FM
Sbjct: 116 PNARIMIHQPLGGAKGQATDIQIQAEEILRMKRDLNKILSENTGQSIETIERDTERDKFM 175
Query: 271 SAEEAKDYGLIDGVVMNPHKI 291
SAEE+ YGLID V++ HKI
Sbjct: 176 SAEESAQYGLIDK-VLSRHKI 195
>gi|418531531|ref|ZP_13097445.1| ATP-dependent Clp protease proteolytic subunit [Comamonas
testosteroni ATCC 11996]
gi|371451485|gb|EHN64523.1| ATP-dependent Clp protease proteolytic subunit [Comamonas
testosteroni ATCC 11996]
Length = 194
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G V D AN++VAQLL+L++ +P+KDI Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLESENPDKDISFYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT+ I+PDVST+C G+AASMGAFLLSAG KGKRY+LPN+++MIHQPLGGA+G ++
Sbjct: 76 AIFDTMNFIKPDVSTLCTGMAASMGAFLLSAGAKGKRYALPNAQVMIHQPLGGARGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E++ + LN L+ TGQ LEKI DT+RD+F+SA+EAK+YGL+D V+
Sbjct: 136 IEIHAREIIKTRERLNKILAERTGQPLEKIQNDTERDYFLSADEAKEYGLVDQVI 190
>gi|389841946|ref|YP_006344030.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cronobacter
sakazakii ES15]
gi|417791995|ref|ZP_12439407.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii E899]
gi|424798413|ref|ZP_18223955.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii 696]
gi|429092459|ref|ZP_19155087.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
dublinensis 1210]
gi|429099391|ref|ZP_19161497.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
dublinensis 582]
gi|429102778|ref|ZP_19164752.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
turicensis 564]
gi|429107667|ref|ZP_19169536.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
malonaticus 681]
gi|429109245|ref|ZP_19171015.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
malonaticus 507]
gi|429114393|ref|ZP_19175311.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii 701]
gi|449309236|ref|YP_007441592.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii SP291]
gi|333953883|gb|EGL71773.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii E899]
gi|387852422|gb|AFK00520.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cronobacter
sakazakii ES15]
gi|423234134|emb|CCK05825.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii 696]
gi|426285731|emb|CCJ87610.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
dublinensis 582]
gi|426289427|emb|CCJ90865.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
turicensis 564]
gi|426294390|emb|CCJ95649.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
malonaticus 681]
gi|426310402|emb|CCJ97128.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
malonaticus 507]
gi|426317522|emb|CCK01424.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii 701]
gi|426742658|emb|CCJ81200.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
dublinensis 1210]
gi|449099269|gb|AGE87303.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii SP291]
Length = 207
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIFSRLLKERIIFLTGQVEDQMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G AASMGAFLL+AGTKGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIQPDVSTICMGQAASMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ HTGQ LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 149 IEIHAREILKVKARMNELMAQHTGQPLEQIERDTERDRFLSAGEAVEYGLVDSIM 203
>gi|405365022|ref|ZP_11026468.1| ATP-dependent Clp protease proteolytic subunit [Chondromyces
apiculatus DSM 436]
gi|397089587|gb|EJJ20496.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 206
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 104/182 (57%), Positives = 145/182 (79%), Gaps = 1/182 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G ++DD+AN+IVAQLL+L++ DP+KDI +Y+NSPGGSVTAG+
Sbjct: 18 RSYDIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPGGSVTAGL 77
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++++ VST+CVG AASMGA LL AG KGKRY+LP+SRIMIHQPLGG +G +D
Sbjct: 78 AIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQPLGGVRGQATD 137
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L KA LN + HT Q++E++ +DTDRD+FM A EAK YG+ID + NP K
Sbjct: 138 IEIQAKEILRMKAKLNELIVKHTAQSIERVEKDTDRDYFMGASEAKAYGIIDE-IQNPRK 196
Query: 291 IL 292
++
Sbjct: 197 VV 198
>gi|260596809|ref|YP_003209380.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
turicensis z3032]
gi|260215986|emb|CBA28638.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
turicensis z3032]
Length = 214
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 36 RSYDIFSRLLKERIIFLTGQVEDQMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 95
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G AASMGAFLL+AGTKGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 96 SIYDTMQFIQPDVSTICMGQAASMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATD 155
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ HTGQ LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 156 IEIHAREILKVKARMNELMAQHTGQPLEQIERDTERDRFLSAGEAVEYGLVDSIM 210
>gi|222824462|ref|YP_002576036.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter lari
RM2100]
gi|254763785|sp|B9KDZ6.1|CLPP_CAMLR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|222539683|gb|ACM64784.1| ATP-dependent ClpAP/ClpXP protease, proteolytic subunit ClpP
[Campylobacter lari RM2100]
Length = 196
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 113/202 (55%), Positives = 144/202 (71%), Gaps = 7/202 (3%)
Query: 89 SPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDA 148
S YIP + G R ++ S+L + RII G + DD+A IVAQLL+L+A
Sbjct: 2 SSYIPYVVEKTSRGE-------RSYDIYSRLLKDRIIMLSGEINDDLAASIVAQLLFLEA 54
Query: 149 VDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRY 208
DP KDI +Y+NSPGG VT+G +I+DT+ +I+ DVST+C+G AASMGAFLLS G GKR+
Sbjct: 55 EDPQKDIYLYINSPGGVVTSGFSIYDTMNYIKADVSTICIGQAASMGAFLLSCGAPGKRF 114
Query: 209 SLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDF 268
+LPNSRIMIHQPLGGA+G +DI++QA E+L KA LN L+ +T Q L KI +DTDRDF
Sbjct: 115 ALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKAILNDILAKNTKQKLSKIEKDTDRDF 174
Query: 269 FMSAEEAKDYGLIDGVVMNPHK 290
FMSA EAK+YGLID V+ K
Sbjct: 175 FMSAIEAKEYGLIDKVLEKSFK 196
>gi|417844175|ref|ZP_12490236.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M21127]
gi|341947560|gb|EGT74207.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M21127]
Length = 193
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 140/177 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L++ DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDINIYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PD+ T+C+G A SMGAFLL+ GT GKR +LPN+R+MIHQPLGG +G SD
Sbjct: 76 AIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTIGKRAALPNARVMIHQPLGGFRGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I + A E+L K LN L++HTGQ++E+I +DTDRD FMSAEEAK YGL+D V++
Sbjct: 136 IQIHAQEILKIKHTLNDRLAFHTGQSIEQIEKDTDRDNFMSAEEAKAYGLVDEVLIK 192
>gi|443324676|ref|ZP_21053413.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
gi|442795717|gb|ELS05067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
Length = 219
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D +A+ +VAQLLYL+A DP KDI +Y+NSPGGSV +GM
Sbjct: 39 RSFDIYSRLLRERIIFLGTAIDDKVADSVVAQLLYLEAEDPEKDIQLYINSPGGSVYSGM 98
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDV T+C G+AASMGAFLLS GTKGKR SLP+SRIMIHQPLGGAQG D
Sbjct: 99 AIYDTMQQIQPDVVTICYGIAASMGAFLLSGGTKGKRMSLPSSRIMIHQPLGGAQGQAVD 158
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN ++ HT Q +KI+ DT+RDF+MS+EEAK+YGLID V+
Sbjct: 159 IEIQAKEILYIKKRLNELIAGHTEQDFDKISLDTERDFYMSSEEAKEYGLIDSVI 213
>gi|417846493|ref|ZP_12492495.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M21639]
gi|341952170|gb|EGT78707.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M21639]
Length = 193
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 140/177 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L++ DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDINIYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PD+ T+C+G A SMGAFLL+ GT GKR +LPN+R+MIHQPLGG +G SD
Sbjct: 76 AIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRTALPNARVMIHQPLGGFRGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I + A E+L K LN L++HTGQ++E+I +DTDRD FMSA+EAK YGL+D V++
Sbjct: 136 IQIHAQEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSADEAKAYGLVDEVLIK 192
>gi|256556952|gb|ACU83574.1| ATP-dependent Clp protease subunit [uncultured bacterium
HF130_AEPn_2]
Length = 211
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 149/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG +
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAE 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKR+ LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G TLE+I DT
Sbjct: 126 GKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGHTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE A++YGLID V+
Sbjct: 186 NRDNFMSAEAAREYGLIDAVI 206
>gi|313892932|ref|ZP_07826509.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. oral taxon 158 str. F0412]
gi|313442285|gb|EFR60700.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. oral taxon 158 str. F0412]
Length = 197
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 149/195 (76%), Gaps = 7/195 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
Y+P + + G R ++ S+L + RII GGP++D++AN ++AQ+L+L+A D
Sbjct: 2 YVPIVVEQSERGE-------RSYDIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAED 54
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P+KDI +Y+NSPGG VTAGMAI+DT+++I+PDVST+CVG AASMGA LL+AGTKGKRY+L
Sbjct: 55 PDKDIHLYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGTKGKRYAL 114
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
P++R+MIHQPLGG QG S+I++ A E+L + LNG L+ +GQ +E + DTDRD FM
Sbjct: 115 PHARVMIHQPLGGVQGQASEIEIHAREILRMREELNGILASRSGQDIEVVARDTDRDNFM 174
Query: 271 SAEEAKDYGLIDGVV 285
SA++A +YGLID V+
Sbjct: 175 SAQDAVEYGLIDEVL 189
>gi|119473285|ref|ZP_01614937.1| ATP-dependent Clp protease proteolytic subunit [Alteromonadales
bacterium TW-7]
gi|119444508|gb|EAW25828.1| ATP-dependent Clp protease proteolytic subunit [Alteromonadales
bacterium TW-7]
Length = 173
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 107/171 (62%), Positives = 136/171 (79%)
Query: 120 FQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHI 179
F+ RII G VED+MAN+I+AQ+L+L++ +P+KDI +Y+NSPGGSVTAGMAI+DT+ I
Sbjct: 2 FKERIIFLTGQVEDNMANLILAQMLFLESENPDKDIFLYINSPGGSVTAGMAIYDTMNFI 61
Query: 180 RPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEML 239
+PDVST+CVG AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG SD ++ A E+L
Sbjct: 62 KPDVSTICVGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQASDFEIHAKEIL 121
Query: 240 HHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
K LN ++ HTGQ L+ I++DTDRD FMSA EA +YGL+D V N K
Sbjct: 122 SIKDKLNRLMAEHTGQPLDVISKDTDRDNFMSASEAVEYGLVDSVFANRDK 172
>gi|398879706|ref|ZP_10634794.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM67]
gi|398886634|ref|ZP_10641501.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM60]
gi|398188905|gb|EJM76194.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM60]
gi|398195850|gb|EJM82877.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM67]
Length = 211
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 149/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAP 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKRY LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G+TLE+I DT
Sbjct: 126 GKRYCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE A++YGLID V+
Sbjct: 186 NRDNFMSAEAAREYGLIDEVI 206
>gi|399002988|ref|ZP_10705662.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM18]
gi|398123674|gb|EJM13215.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM18]
Length = 211
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 149/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAP 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKRY LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G+TLE+I DT
Sbjct: 126 GKRYCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAAHSGRTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE A++YGLID V+
Sbjct: 186 NRDNFMSAEAAREYGLIDEVI 206
>gi|395649556|ref|ZP_10437406.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 211
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 149/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAH 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKRY LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G+TLE+I DT
Sbjct: 126 GKRYCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE A++YGLID V+
Sbjct: 186 NRDNFMSAEMAREYGLIDEVI 206
>gi|323456646|gb|EGB12512.1| hypothetical protein AURANDRAFT_70482, partial [Aureococcus
anophagefferens]
Length = 1031
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 109/179 (60%), Positives = 140/179 (78%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
+V+S+L + RI+ G V D++AN++VAQ+LYL DP DI +Y+NSPGGSV+AGMAI+
Sbjct: 70 DVVSRLLKDRILLLGSEVNDEVANVLVAQMLYLANEDPEGDITLYINSPGGSVSAGMAIY 129
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I DVSTVC G+AASMGAFLL AG+KGKR SLPN+RIMIHQPLGGAQG +DI++
Sbjct: 130 DTMQFIPCDVSTVCFGMAASMGAFLLGAGSKGKRKSLPNARIMIHQPLGGAQGQAADIEI 189
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKIL 292
QA E+L KA +N Y+S +TGQ ++K+ EDTDRDF+M EA+DYGLID M H L
Sbjct: 190 QAKEILFTKACINTYMSEYTGQPIDKLAEDTDRDFYMMPTEAQDYGLIDESRMVMHSWL 248
>gi|342217854|ref|ZP_08710492.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Megasphaera sp. UPII 135-E]
gi|341592841|gb|EGS35701.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Megasphaera sp. UPII 135-E]
Length = 198
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 107/199 (53%), Positives = 149/199 (74%), Gaps = 9/199 (4%)
Query: 91 YIP-TYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAV 149
Y+P Q EQG R ++ S+L + RI+ G VED MAN+++AQLL+L+A
Sbjct: 4 YVPLVIEQTEQGE--------RSYDIYSRLLKDRIVFLSGQVEDHMANVLIAQLLFLEAE 55
Query: 150 DPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS 209
DP+KDI +Y+NSPGG VTAG+AI+DT+++I+PD+ST+C+G AASM + LL+AGT+GKR++
Sbjct: 56 DPDKDIYLYINSPGGVVTAGLAIYDTMQYIKPDISTICIGSAASMASVLLAAGTRGKRFA 115
Query: 210 LPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFF 269
LP+S++MIHQPLGG QG +DI++ A E+L + LNG LS HTGQ LE I +DT+RD F
Sbjct: 116 LPHSQVMIHQPLGGVQGQATDIEIHAREILRMRKELNGILSAHTGQPLEVIEKDTERDNF 175
Query: 270 MSAEEAKDYGLIDGVVMNP 288
++AE AK YGLID ++ P
Sbjct: 176 LTAEAAKAYGLIDDILTRP 194
>gi|452943368|ref|YP_007499533.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. HO]
gi|452881786|gb|AGG14490.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. HO]
Length = 205
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L Q RI+ G P++D +AN+IVAQLL+L+A DP KDI MY+NSPGGSVTAG+
Sbjct: 27 RAYDIYSRLLQDRIVILGFPIDDHVANLIVAQLLFLEAQDPEKDIQMYINSPGGSVTAGL 86
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDV+T+C+G AASMGA LL+AG KGKR++LPN+RIMIHQPLGG QG +D
Sbjct: 87 AIYDTMQYIKPDVTTICIGQAASMGAVLLAAGAKGKRFALPNARIMIHQPLGGVQGQATD 146
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+ K LN L+ TG++L +I +D DRD+FMSAEEAK+YGLID V+
Sbjct: 147 ILIHAEEIKRIKHILNTILANATGKSLRQIEKDVDRDYFMSAEEAKNYGLIDKVI 201
>gi|163751869|ref|ZP_02159083.1| ATP-dependent Clp protease proteolytic subunit [Shewanella benthica
KT99]
gi|161328219|gb|EDP99383.1| ATP-dependent Clp protease proteolytic subunit [Shewanella benthica
KT99]
Length = 203
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GPVE+ MAN++VAQLL+L++ P+KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKERIIFLVGPVEEHMANLVVAQLLFLESESPDKDIFLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVSTVC+G AASMGAFLL+ G GKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 85 AIYDTMQFIKPDVSTVCIGQAASMGAFLLAGGAAGKRHCLPNSRVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ HTGQ+LE I DTDRD FMSA +A +YGLID V+
Sbjct: 145 IAIHAQEILGIKDKLNQMLAEHTGQSLEVIERDTDRDNFMSAAQAAEYGLIDSVM 199
>gi|431929875|ref|YP_007242921.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioflavicoccus mobilis 8321]
gi|431828178|gb|AGA89291.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioflavicoccus mobilis 8321]
Length = 214
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R++ GP+ED MAN++VAQLL+L++ +P+KDI +Y+NSPGGSVTAG+
Sbjct: 30 RSYDIYSRLLKERVVFLVGPIEDHMANLVVAQLLFLESENPDKDIHLYINSPGGSVTAGL 89
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+R IRPD+ST+C+G AASMGA LL+ GTKGKR+ LP+SR+MIHQPLGG QG +D
Sbjct: 90 AIYDTMRFIRPDISTMCIGQAASMGALLLTGGTKGKRFCLPHSRMMIHQPLGGFQGQATD 149
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
ID+ A E+L + LN LS+HTGQT+E+I +DT+RD FM E A DYGLID V+
Sbjct: 150 IDIHAREILFIRERLNQILSHHTGQTVEQIADDTERDRFMGGEAAVDYGLIDRVL 204
>gi|222055723|ref|YP_002538085.1| ATP-dependent Clp protease proteolytic subunit [Geobacter daltonii
FRC-32]
gi|254763790|sp|B9M0Y1.1|CLPP_GEOSF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|221565012|gb|ACM20984.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
daltonii FRC-32]
Length = 199
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GG ++D ++N+++AQLL+L+A DP+KDI +Y+NSPGG VTAGM
Sbjct: 15 RSYDIYSRLLKDRIIFLGGAIDDTVSNLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGM 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+R+I+ VST+CVG AASMGAFLLS G KGKR+SL NSRIMIHQPLGG QG +D
Sbjct: 75 AIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRFSLANSRIMIHQPLGGFQGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ H+GQT+EKI DT+RD+FMS E+AK YG+ID ++
Sbjct: 135 IHIHAQEILRMKKKLNELLAEHSGQTVEKIEADTERDYFMSGEDAKTYGIIDSII 189
>gi|440229732|ref|YP_007343525.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
marcescens FGI94]
gi|440051437|gb|AGB81340.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
marcescens FGI94]
Length = 207
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A P+KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAESPDKDIFLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMG+FLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQACSMGSFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L+ KA +N ++ HTGQ LE+I DT+RD FM+AEE+ +YGL+DG++
Sbjct: 149 IEIHAREILNVKARMNELMAKHTGQPLEQIERDTERDRFMTAEESVEYGLVDGIL 203
>gi|338999443|ref|ZP_08638086.1| ATP-dependent Clp protease proteolytic subunit [Halomonas sp. TD01]
gi|338763592|gb|EGP18581.1| ATP-dependent Clp protease proteolytic subunit [Halomonas sp. TD01]
Length = 205
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 110/193 (56%), Positives = 145/193 (75%), Gaps = 6/193 (3%)
Query: 99 EQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPN 152
+ GG PM++ R ++ S+L + R+I GPVED MAN++VAQLL+L++ +P+
Sbjct: 7 QNAGGLVPMVVEQSAKGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLESENPD 66
Query: 153 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 212
KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVSTVC+G AASMGA LL+AG GKRY LPN
Sbjct: 67 KDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTVCIGQAASMGALLLTAGAAGKRYCLPN 126
Query: 213 SRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSA 272
SR+MIHQPLGG QG SDI++ E+L + LN L++HTGQ LE + DTDRD FMSA
Sbjct: 127 SRVMIHQPLGGYQGQASDIEIHTREILGIREKLNQILAHHTGQDLEAVARDTDRDNFMSA 186
Query: 273 EEAKDYGLIDGVV 285
A++YGLID V+
Sbjct: 187 TTAQEYGLIDAVL 199
>gi|238023189|ref|ZP_04603615.1| hypothetical protein GCWU000324_03115 [Kingella oralis ATCC 51147]
gi|237865572|gb|EEP66712.1| hypothetical protein GCWU000324_03115 [Kingella oralis ATCC 51147]
Length = 206
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 114/203 (56%), Positives = 151/203 (74%), Gaps = 9/203 (4%)
Query: 85 EVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
++ ++ IPT + + G G R ++ S+L + RII GPV D AN++VAQLL
Sbjct: 4 DIQNNTLIPTVIE-QSGRGE------RAFDIYSRLLKERIIFLVGPVNDHTANLVVAQLL 56
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L++ +P+KDI Y+NSPGGSVTAGM+I+DT++ I+PDV T+C+G AASMGAFLLSAGTK
Sbjct: 57 FLESENPDKDIYFYINSPGGSVTAGMSIYDTMKFIKPDVQTLCLGQAASMGAFLLSAGTK 116
Query: 205 GKRYSLPNSRIMIHQPL--GGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINE 262
GKR++LPNSR+MIHQPL GG G SDI++ A E+L K LN L+ HTG++LE+I
Sbjct: 117 GKRFALPNSRVMIHQPLISGGLGGQASDIEIHARELLKLKEKLNQMLAEHTGKSLEQIER 176
Query: 263 DTDRDFFMSAEEAKDYGLIDGVV 285
DTDRD FMSA+EA DYGLID V+
Sbjct: 177 DTDRDNFMSAQEAADYGLIDKVI 199
>gi|157164595|ref|YP_001465991.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
concisus 13826]
gi|416113678|ref|ZP_11593429.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
concisus UNSWCD]
gi|112801723|gb|EAT99067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
concisus 13826]
gi|384578462|gb|EIF07727.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
concisus UNSWCD]
Length = 196
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 140/180 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G +ED MA IVAQLL+L+A DP+KDI +Y+NSPGG +T+G
Sbjct: 17 RSYDIYSRLLKDRIVMLSGEIEDGMAASIVAQLLFLEAEDPDKDIYLYINSPGGVITSGF 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ +I+PDV T+C+G AASMGAFLLS G GKRY+LPNSRIMIHQPLGGA+G +D
Sbjct: 77 SIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAPGKRYALPNSRIMIHQPLGGARGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L K LNG L+ +TGQ L KI +DT+RDFFMS+ EAK+YGL+D ++ K
Sbjct: 137 IEIQAREILRLKEILNGILAKNTGQKLSKIVKDTERDFFMSSAEAKEYGLVDKILEKSFK 196
>gi|430750770|ref|YP_007213678.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
gi|430734735|gb|AGA58680.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
Length = 198
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 105/179 (58%), Positives = 136/179 (75%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++DD+AN+++AQLL+L A DP KDI +Y+NSPGGSVTAG+
Sbjct: 16 RSYDIYSRLLKDRIIFLGSPIDDDVANLVIAQLLFLAAEDPEKDIYLYINSPGGSVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
I+DT+++I+PDVST+CVG+AASM + LL+AG KGKRY+LPNS +MIHQPLGG +G +D
Sbjct: 76 GIYDTMQYIKPDVSTICVGIAASMASLLLTAGAKGKRYALPNSEVMIHQPLGGVRGQAAD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPH 289
I + A+ +L K LN TGQ EKI DTDRDFFMSAEEA YGLID V+ P
Sbjct: 136 IKIHADWILKTKHKLNQIYVERTGQPYEKIERDTDRDFFMSAEEALAYGLIDKVITRPE 194
>gi|407364028|ref|ZP_11110560.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
mandelii JR-1]
Length = 211
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 148/201 (73%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAA 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKRY LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G TLE+I DT
Sbjct: 126 GKRYCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGHTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE A++YGLID V+
Sbjct: 186 NRDNFMSAEAAREYGLIDEVI 206
>gi|398985563|ref|ZP_10691098.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM24]
gi|399015406|ref|ZP_10717679.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM16]
gi|398108657|gb|EJL98610.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM16]
gi|398153942|gb|EJM42433.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM24]
Length = 225
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 149/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 20 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 79
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG
Sbjct: 80 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAP 139
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKR+ LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G+TLE+I DT
Sbjct: 140 GKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDT 199
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE AK+YGLID V+
Sbjct: 200 NRDNFMSAEAAKEYGLIDEVI 220
>gi|332981496|ref|YP_004462937.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mahella
australiensis 50-1 BON]
gi|332699174|gb|AEE96115.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mahella
australiensis 50-1 BON]
Length = 194
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 102/177 (57%), Positives = 144/177 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V+D A+++VAQ+L+L++ DP+KDI +Y+NSPGGSVTAG
Sbjct: 16 RSYDIYSRLLKERIVFLDGEVDDATASLVVAQMLFLESEDPDKDIHLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G+AASMGAFLL+AG KGKRY+LPNS I+IHQP+GGA+G +D
Sbjct: 76 AIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRYALPNSEILIHQPMGGARGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I + A +++ K LN LS TGQ EKI +DTDRDFFMSA+EAK+YG++D V+++
Sbjct: 136 IMIHAEQIVRIKRRLNEILSERTGQPYEKIEKDTDRDFFMSAQEAKEYGIVDEVIIS 192
>gi|253996690|ref|YP_003048754.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylotenera
mobilis JLW8]
gi|253983369|gb|ACT48227.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylotenera
mobilis JLW8]
Length = 214
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 150/191 (78%), Gaps = 6/191 (3%)
Query: 101 GGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKD 154
G G PM++ GR + ++ S+L + R+I GPV D AN++VAQLL+L+A +P+KD
Sbjct: 17 GLGYIPMVIEQSGRGERSFDIYSRLLKERVIFLVGPVNDMSANLVVAQLLFLEAENPDKD 76
Query: 155 IIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSR 214
I +Y+NSPGGSVTAGM+I+DT++ I+PDVST+C+G AASMGAFLL+AG K KRYSLPNSR
Sbjct: 77 ISLYINSPGGSVTAGMSIYDTMQFIKPDVSTLCIGQAASMGAFLLAAGAKDKRYSLPNSR 136
Query: 215 IMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEE 274
IMIHQP GG QG SDI++ A E+L+ +A LN L++HTG+T E+I+ DT+RD FMSAE+
Sbjct: 137 IMIHQPSGGFQGQSSDIEIHAKEILYLRAKLNDILAHHTGRTAEEIDRDTERDNFMSAEQ 196
Query: 275 AKDYGLIDGVV 285
+ YGLID V+
Sbjct: 197 SVAYGLIDKVI 207
>gi|399924495|ref|ZP_10781853.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
rhinitidis 1-13]
Length = 194
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D MA++IVAQLL+L++ DPNKDI +Y+NSPGGSV+AG
Sbjct: 16 RSYDIYSRLLKDRIIFASGEVNDAMADLIVAQLLFLESEDPNKDIQLYINSPGGSVSAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ +I+PDVST+C+G+AASMGAFLL++G KGKR++LPNS IMIHQP GGAQG SD
Sbjct: 76 AIYDTMNYIKPDVSTICIGMAASMGAFLLASGAKGKRFALPNSDIMIHQPSGGAQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A ++L + LN LS TGQ LEKI DTDRD+++S+EEAK YGLID V+
Sbjct: 136 IQINAEKILKIRHKLNEILSDRTGQPLEKIERDTDRDYWLSSEEAKKYGLIDKVI 190
>gi|428774097|ref|YP_007165885.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
gi|428688376|gb|AFZ48236.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
Length = 199
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 108/174 (62%), Positives = 143/174 (82%), Gaps = 2/174 (1%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
N+ +L++ RII G V D +AN I+A +LYLD+ D NK I +Y+NSPGGSVTAGMAI+
Sbjct: 22 NIYDRLYRERIIFLGRGVNDSLANQIIAVMLYLDSEDNNKPIYLYINSPGGSVTAGMAIY 81
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQ--SDI 231
DT++HI+ +V T+CVGLAASMGAFLL+AGTKGKR +LP+SRIMIHQPLGG QG + +DI
Sbjct: 82 DTMQHIKSEVVTICVGLAASMGAFLLAAGTKGKRLALPHSRIMIHQPLGGIQGRRQATDI 141
Query: 232 DLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
+++A E+L K +LN +++HTGQT+EKI +DTDRD+FMSA+EA +YGLID V+
Sbjct: 142 EIEAKEILRIKNDLNRIMAFHTGQTIEKIEKDTDRDYFMSAQEALEYGLIDKVI 195
>gi|334129245|ref|ZP_08503050.1| ATP-dependent Clp protease proteolytic subunit [Methyloversatilis
universalis FAM5]
gi|333445471|gb|EGK73412.1| ATP-dependent Clp protease proteolytic subunit [Methyloversatilis
universalis FAM5]
Length = 206
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 108/191 (56%), Positives = 146/191 (76%), Gaps = 6/191 (3%)
Query: 101 GGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKD 154
G G PM++ R ++ S+L + R++ GPV D AN+IVAQLL+L++ +P+KD
Sbjct: 7 GLGMVPMVIEQSGRGERAYDIYSRLLRERVVFLVGPVNDATANLIVAQLLFLESENPDKD 66
Query: 155 IIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSR 214
I Y+NSPGGSVTAG++I+DT++ I+PDVST+C+G AASMGAFLLSAG KGKR LPNSR
Sbjct: 67 IFFYINSPGGSVTAGLSIYDTMQFIKPDVSTLCIGQAASMGAFLLSAGAKGKRACLPNSR 126
Query: 215 IMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEE 274
+MIHQP+GG QG SDI++ A E+L +A LN +S+HTGQ +E I DTDRD F+SAE+
Sbjct: 127 VMIHQPMGGFQGQASDIEIHAREILTLRAKLNTIMSHHTGQPIETIERDTDRDNFLSAEQ 186
Query: 275 AKDYGLIDGVV 285
A++YG+ID V+
Sbjct: 187 AREYGIIDKVL 197
>gi|259047276|ref|ZP_05737677.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Granulicatella adiacens ATCC 49175]
gi|259036052|gb|EEW37307.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Granulicatella adiacens ATCC 49175]
Length = 197
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GP++DDMAN I+AQLL+LDA DP KDI MY+NSPGGSVTAG+
Sbjct: 16 RAYDIYSRLLKDRIIMVSGPIQDDMANAIIAQLLFLDAQDPEKDIYMYINSPGGSVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+ DV T+ +GLAASMG+FLL+AG KGKRY+LPN+ I+IHQPLGGAQG ++
Sbjct: 76 AIYDTMNFIKADVQTIAMGLAASMGSFLLTAGAKGKRYALPNAEILIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A ++L + LN L+ TGQ L +I +DTDRD +M+A+EA +YGLID ++
Sbjct: 136 IEIAARQILKTRERLNKILAKQTGQKLSRIEKDTDRDNYMTAQEALEYGLIDAIM 190
>gi|304407273|ref|ZP_07388926.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
curdlanolyticus YK9]
gi|304343714|gb|EFM09555.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
curdlanolyticus YK9]
Length = 195
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D +AN I+AQLL+L A DP KDI +Y+NSPGGS+TAGM
Sbjct: 18 RAYDIYSRLLKDRIIFLGTGVNDIVANSIIAQLLFLAADDPEKDISLYINSPGGSITAGM 77
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+CVG+AASMGAFLL+AG GKRY+LPNS +MIHQPLGGA+G SD
Sbjct: 78 AIYDTMQFIKPDVSTICVGMAASMGAFLLTAGAIGKRYALPNSEVMIHQPLGGAEGQASD 137
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I+++A +L + LNG L+ + Q LE+I +DTDRD+FMSAEEA+ YGLID V+
Sbjct: 138 IEIRAKRILKMRDKLNGILAERSNQPLERIEKDTDRDYFMSAEEARQYGLIDKVI 192
>gi|330446593|ref|ZP_08310245.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328490784|dbj|GAA04742.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 207
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN++VAQLL+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+P+VSTVC+G A SMGAFLL+ G KGKRY LPNSR+MIHQPLGG QG SD
Sbjct: 89 SIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRVMIHQPLGGFQGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LNG L+ HTGQ LE I DTDRD FMSA++A +YGL+D V+
Sbjct: 149 IQIHAQEILTIKQRLNGLLAEHTGQPLEIIERDTDRDNFMSADQAVEYGLVDAVL 203
>gi|145628436|ref|ZP_01784237.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 22.1-21]
gi|145633845|ref|ZP_01789567.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 3655]
gi|145637965|ref|ZP_01793604.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittHH]
gi|145639474|ref|ZP_01795079.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittII]
gi|148826642|ref|YP_001291395.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittEE]
gi|148827882|ref|YP_001292635.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittGG]
gi|229845547|ref|ZP_04465675.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 6P18H1]
gi|229847178|ref|ZP_04467282.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 7P49H1]
gi|260583375|ref|ZP_05851146.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
influenzae NT127]
gi|319775445|ref|YP_004137933.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae F3047]
gi|386266553|ref|YP_005830045.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
influenzae R2846]
gi|166201826|sp|A5UE11.1|CLPP_HAEIE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201827|sp|A5UHJ6.1|CLPP_HAEIG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|144980211|gb|EDJ89870.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 22.1-21]
gi|144985287|gb|EDJ92126.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 3655]
gi|145268831|gb|EDK08795.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittHH]
gi|145271521|gb|EDK11433.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittII]
gi|148716802|gb|ABQ99012.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittEE]
gi|148719124|gb|ABR00252.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittGG]
gi|229809854|gb|EEP45576.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 7P49H1]
gi|229811563|gb|EEP47264.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 6P18H1]
gi|260093580|gb|EEW77497.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
influenzae NT127]
gi|309751687|gb|ADO81671.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
influenzae R2866]
gi|309973789|gb|ADO96990.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
influenzae R2846]
gi|317450036|emb|CBY86250.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae F3047]
Length = 193
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 140/177 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L++ DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDINIYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PD+ T+C+G A SMGAFLL+ GT GKR +LPN+R+MIHQPLGG +G SD
Sbjct: 76 AIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVMIHQPLGGFRGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I + A E+L K LN L++HTGQ++E+I +DTDRD FMSAEEA+ YGL+D V++
Sbjct: 136 IQIHAQEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEAQAYGLVDEVLVK 192
>gi|426408621|ref|YP_007028720.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
UW4]
gi|426266838|gb|AFY18915.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
UW4]
Length = 211
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 150/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG +
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAQ 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKRY LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G+TLE+I DT
Sbjct: 126 GKRYCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSA+ A++YGLID V+
Sbjct: 186 NRDNFMSADAAREYGLIDEVI 206
>gi|424922478|ref|ZP_18345839.1| ClpP [Pseudomonas fluorescens R124]
gi|404303638|gb|EJZ57600.1| ClpP [Pseudomonas fluorescens R124]
Length = 211
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 149/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAP 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKR+ LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G+TLE+I DT
Sbjct: 126 GKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE AK+YGLID V+
Sbjct: 186 NRDNFMSAEAAKEYGLIDEVI 206
>gi|422023827|ref|ZP_16370329.1| ATP-dependent Clp protease proteolytic subunit [Providencia sneebia
DSM 19967]
gi|414091842|gb|EKT53523.1| ATP-dependent Clp protease proteolytic subunit [Providencia sneebia
DSM 19967]
Length = 206
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 102/174 (58%), Positives = 141/174 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AGT+GKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQACSMGAFLLTAGTEGKRFCLPNSRVMIHQPLGGYQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++ A E+L KA +N ++ HTG+++E+IN DT+RD F+SA EAK+YGL+D +
Sbjct: 149 IEIHAQEILKVKARMNELMAKHTGKSIEEINRDTERDRFLSANEAKEYGLVDHI 202
>gi|223042116|ref|ZP_03612288.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
minor 202]
gi|240950344|ref|ZP_04754614.1| ATP-dependent Clp protease proteolytic subunit ClpP [Actinobacillus
minor NM305]
gi|223017093|gb|EEF15533.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
minor 202]
gi|240295155|gb|EER45974.1| ATP-dependent Clp protease proteolytic subunit ClpP [Actinobacillus
minor NM305]
Length = 197
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED+MAN+IVAQLL+L+A DP KDI +Y+NSPGG VTAG+
Sbjct: 16 RSYDIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPGGVVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDV+T+C G A SMGAFLLS G KGKR++LPN+R+MIHQPLGGA+G +D
Sbjct: 76 AIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I +QA E+L K L ++ H+GQ+ +K+ DT+RD FMSAEEAK+YGLID V+
Sbjct: 136 IQIQAQEILKLKEMLTRKMAEHSGQSFDKVAADTERDNFMSAEEAKEYGLIDKVL 190
>gi|182417589|ref|ZP_02948911.1| Clp protease [Clostridium butyricum 5521]
gi|237667767|ref|ZP_04527751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
butyricum E4 str. BoNT E BL5262]
gi|182378544|gb|EDT76073.1| Clp protease [Clostridium butyricum 5521]
gi|237656115|gb|EEP53671.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
butyricum E4 str. BoNT E BL5262]
Length = 201
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 138/180 (76%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D A +IVAQLL+LD+ DP+KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIFSRLLKERIIMLSGEVNDASAQLIVAQLLFLDSEDPDKDISLYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I DVST+CVG+AASMGAFLLS G KGKRY+LPN+ IMIHQPLGG QG +D
Sbjct: 76 AIYDTMQLINADVSTICVGMAASMGAFLLSCGAKGKRYALPNAEIMIHQPLGGFQGQVTD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ AN ML K LN LS +TG+ LE I DT+RD FMSAE+AK+YGL+D +++ K
Sbjct: 136 IEIHANRMLKVKEVLNKTLSENTGKPLEVIQRDTERDNFMSAEDAKEYGLVDEIIVKKPK 195
>gi|77459919|ref|YP_349426.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens Pf0-1]
gi|398849723|ref|ZP_10606452.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM80]
gi|398966271|ref|ZP_10681430.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM30]
gi|398974167|ref|ZP_10684904.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM25]
gi|92087005|sp|Q3K9W9.1|CLPP_PSEPF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77383922|gb|ABA75435.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudomonas
fluorescens Pf0-1]
gi|398142051|gb|EJM30956.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM25]
gi|398146239|gb|EJM34995.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM30]
gi|398250438|gb|EJN35758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM80]
Length = 211
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 149/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAP 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKR+ LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G+TLE+I DT
Sbjct: 126 GKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE AK+YGLID V+
Sbjct: 186 NRDNFMSAEAAKEYGLIDEVI 206
>gi|386319889|ref|YP_006016052.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pseudintermedius ED99]
gi|323465060|gb|ADX77213.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pseudintermedius ED99]
Length = 195
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 141/180 (78%), Gaps = 1/180 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ A +L + LN LS TGQ +EKI +DTDRD F++A+EAK+YGLID VM P K
Sbjct: 136 IEIAAKHILRTRERLNKILSERTGQPIEKIEKDTDRDNFLTAQEAKEYGLIDE-VMEPEK 194
>gi|170692395|ref|ZP_02883558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
graminis C4D1M]
gi|307729638|ref|YP_003906862.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1003]
gi|323526047|ref|YP_004228200.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1001]
gi|170142825|gb|EDT10990.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
graminis C4D1M]
gi|307584173|gb|ADN57571.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1003]
gi|323383049|gb|ADX55140.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1001]
Length = 217
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 142/174 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D AN++VAQ+L+L++ +P+KDI Y+NSPGGSV+AGM
Sbjct: 39 RSYDIYSRLLKERIVFLVGEVNDQTANLVVAQMLFLESENPDKDIYFYINSPGGSVSAGM 98
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C+GLAASMGAFLL+AG KGKR++LPNSR+MIHQPLGGA+G SD
Sbjct: 99 AIYDTMQFIKPDVSTLCMGLAASMGAFLLAAGAKGKRFALPNSRVMIHQPLGGARGQASD 158
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++QA E+L+ K LN L++HTGQ +E+I DTDRD FMS ++A+ YGL+D V
Sbjct: 159 IEIQAREILYLKERLNHLLAHHTGQPVERIARDTDRDNFMSGDDAQAYGLVDQV 212
>gi|304440714|ref|ZP_07400598.1| ATP-dependent Clp protease proteolytic subunit [Peptoniphilus
duerdenii ATCC BAA-1640]
gi|304370901|gb|EFM24523.1| ATP-dependent Clp protease proteolytic subunit [Peptoniphilus
duerdenii ATCC BAA-1640]
Length = 194
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G + + A+++VAQLL+L++ DPNKDI +Y+NSPGGSV+AG
Sbjct: 16 RAYDIYSRLLKERIIFISGEINNVTADLVVAQLLFLESEDPNKDIQIYINSPGGSVSAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT+ +I+PDVST+C+G+AASMGAFLL+AG KGKR++LPNS IMIHQPLGGAQG SD
Sbjct: 76 AIFDTMNYIKPDVSTICIGMAASMGAFLLAAGKKGKRFALPNSEIMIHQPLGGAQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A +++ + +N L+ TGQ LEKI DTDRD+F+SA+EAK+YGLID V+
Sbjct: 136 IMIHAEKIIEIRQRINKILAEETGQPLEKIEHDTDRDYFLSADEAKEYGLIDNVI 190
>gi|407802230|ref|ZP_11149072.1| ATP-dependent Clp protease, proteolytic subunitclpp [Alcanivorax
sp. W11-5]
gi|407023905|gb|EKE35650.1| ATP-dependent Clp protease, proteolytic subunitclpp [Alcanivorax
sp. W11-5]
Length = 215
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 112/198 (56%), Positives = 148/198 (74%), Gaps = 6/198 (3%)
Query: 94 TYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLD 147
T AQ G PM++ R ++ S+L + R+I G VED MAN+IVAQ+L+L+
Sbjct: 13 TPAQNTSALGLVPMVIEQTARGERSFDIYSRLLKERVIFLVGQVEDHMANLIVAQMLFLE 72
Query: 148 AVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKR 207
+ +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P VST+C+G AASMGAFLL+AG +GKR
Sbjct: 73 SENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPAVSTMCIGQAASMGAFLLAAGEQGKR 132
Query: 208 YSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRD 267
++LPNSRIMIHQPLGG QG SDI++ A E+L K+ LN LS+HTG LE++ DTDRD
Sbjct: 133 FALPNSRIMIHQPLGGFQGQASDIEIHAREILKIKSRLNELLSHHTGMDLERVERDTDRD 192
Query: 268 FFMSAEEAKDYGLIDGVV 285
FM AE AK YGL+D V+
Sbjct: 193 NFMDAEAAKAYGLVDQVL 210
>gi|188590743|ref|YP_001921998.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum E3 str. Alaska E43]
gi|251778109|ref|ZP_04821029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum E1 str. 'BoNT E Beluga']
gi|226706443|sp|B2UX13.1|CLPP_CLOBA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|188501024|gb|ACD54160.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum E3 str. Alaska E43]
gi|243082424|gb|EES48314.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum E1 str. 'BoNT E Beluga']
Length = 199
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V DD +N+IV+QLL+L++ DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RSYDIFSRLLKERIIMLSGEVNDDSSNLIVSQLLFLESEDPDKDISIYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG+AASMGAFLLS+G KGKRY+LPN+ IMIHQPLGG QG +D
Sbjct: 76 AIYDTMQYIKPDVSTICVGMAASMGAFLLSSGAKGKRYALPNAEIMIHQPLGGFQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + AN +L K +LN LS +T Q LE I D +RD FM+A+EAK YGL+D V+
Sbjct: 136 IQIHANRILKIKESLNKILSENTNQPLEVIEADVERDNFMTADEAKAYGLVDKVI 190
>gi|312128165|ref|YP_003993039.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor hydrothermalis 108]
gi|312134617|ref|YP_004001955.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor owensensis OL]
gi|312792981|ref|YP_004025904.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|344996808|ref|YP_004799151.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor lactoaceticus 6A]
gi|311774668|gb|ADQ04155.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor owensensis OL]
gi|311778184|gb|ADQ07670.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor hydrothermalis 108]
gi|312180121|gb|ADQ40291.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|343965027|gb|AEM74174.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor lactoaceticus 6A]
Length = 195
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G + DD+A++IVAQLL+L+A DP+KDI +Y+NSPGGSVTAG
Sbjct: 17 RAYDIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPGGSVTAGF 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG+AASMGAFLL+AG KGKR++LPNS IMIHQPLGG +G +D
Sbjct: 77 AIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGVRGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A +L K +N LS TGQ +E I DTDRDFFM+AEEA YG+ID V+
Sbjct: 137 IKIHAEWILKIKNRINKILSERTGQPIEVIERDTDRDFFMTAEEALKYGIIDKVI 191
>gi|206901598|ref|YP_002250810.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
thermophilum H-6-12]
gi|206740701|gb|ACI19759.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
thermophilum H-6-12]
Length = 194
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G + D++AN++VAQLL+L++ DP KDI +Y+NSPGG V+AG+
Sbjct: 15 RAYDIYSRLLKSRIVFLGTAINDEVANLVVAQLLFLESEDPEKDIYLYINSPGGEVSAGL 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+RHI+P V+TVCVG AASM A LL+AG KGKRY+LP+SR+MIHQPLGGA G +D
Sbjct: 75 AIYDTMRHIKPKVATVCVGQAASMAAILLAAGDKGKRYALPHSRVMIHQPLGGAYGPAAD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ E+L K LN L++HTGQ +EKI DTDRDFFMSA EAK+YG++D V+
Sbjct: 135 IEIHTREILKIKRVLNEILAHHTGQPIEKIERDTDRDFFMSAYEAKEYGIVDEVL 189
>gi|352101155|ref|ZP_08958578.1| ATP-dependent Clp protease proteolytic subunit [Halomonas sp. HAL1]
gi|350600639|gb|EHA16700.1| ATP-dependent Clp protease proteolytic subunit [Halomonas sp. HAL1]
Length = 205
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 108/193 (55%), Positives = 146/193 (75%), Gaps = 6/193 (3%)
Query: 99 EQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPN 152
+ GG PM++ R ++ S+L + R+I GPVED MAN++VAQLL+L++ +P+
Sbjct: 7 QNAGGLVPMVVEQSAKGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLESENPD 66
Query: 153 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 212
KDI +Y+NSPGGSVTAGM+I+DT++ ++PDVSTVC+G AASMGA LL+AG GKRY LPN
Sbjct: 67 KDIHLYINSPGGSVTAGMSIYDTMQFVKPDVSTVCIGQAASMGALLLTAGAAGKRYCLPN 126
Query: 213 SRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSA 272
SR+MIHQPLGG QG SDI++ E+L + LN L++HTGQ +E ++ DTDRD FMSA
Sbjct: 127 SRVMIHQPLGGYQGQASDIEIHTREILGIREKLNQILAHHTGQDIETVSRDTDRDNFMSA 186
Query: 273 EEAKDYGLIDGVV 285
+A +YGLID V+
Sbjct: 187 NKATEYGLIDAVL 199
>gi|329122525|ref|ZP_08251109.1| ATP-dependent Clp protease, protease subunit [Haemophilus aegyptius
ATCC 11116]
gi|327473154|gb|EGF18577.1| ATP-dependent Clp protease, protease subunit [Haemophilus aegyptius
ATCC 11116]
Length = 211
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 140/177 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L++ DP KDI +Y+NSPGGSVTAGM
Sbjct: 34 RSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDINIYINSPGGSVTAGM 93
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PD+ T+C+G A SMGAFLL+ GT GKR +LPN+R+MIHQPLGG +G SD
Sbjct: 94 AIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVMIHQPLGGFRGQASD 153
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I + A E+L K LN L++HTGQ++E+I +DTDRD FMSAEEA+ YGL+D V++
Sbjct: 154 IQIHAQEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEAQVYGLVDEVLVK 210
>gi|407696210|ref|YP_006820998.1| ATP-dependent Clp protease proteolytic subunit [Alcanivorax
dieselolei B5]
gi|407253548|gb|AFT70655.1| ATP-dependent Clp protease proteolytic subunit [Alcanivorax
dieselolei B5]
Length = 216
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 107/172 (62%), Positives = 141/172 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L++ +P+KDI +Y+NSPGGSVTAGM+I+
Sbjct: 42 DIYSRLLKERVIFLIGQVEDYMANLIVAQMLFLESENPDKDIHLYINSPGGSVTAGMSIY 101
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+P+VST+CVG AASMGAFLL+AG +GKR +LP+SR+MIHQPLGG QG SDI++
Sbjct: 102 DTMQFIKPEVSTMCVGQAASMGAFLLAAGAEGKRLALPHSRVMIHQPLGGFQGQASDIEI 161
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L KA LN L+ HTGQ LE + DTDRD FMSAE+A++YGLID VV
Sbjct: 162 HAKEILKIKAQLNELLAKHTGQPLEVLERDTDRDNFMSAEQAREYGLIDQVV 213
>gi|425790911|ref|YP_007018828.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Aklavik86]
gi|425629226|gb|AFX89766.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Aklavik86]
Length = 195
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 143/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G + D +A+ IVAQLL+L+A DP KDI +Y+NSPGG +T+G+
Sbjct: 16 RSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ IRPDVST+C+G AASMGAFLLS G KGKR+SLP+SRIMIHQPLGGAQG SD
Sbjct: 76 SIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ +NE+L K+ LN L+ ++GQ+LE+I +DTDRDF+MSA+EAK+YGLID V+
Sbjct: 136 IEIISNEILRLKSLLNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVL 190
>gi|399050842|ref|ZP_10740886.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
gi|433542108|ref|ZP_20498542.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
gi|398051558|gb|EJL43880.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
gi|432186623|gb|ELK44090.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
Length = 193
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN++VAQLL+L A DP KDI +Y+NSPGGSVTAGM
Sbjct: 15 RSYDIYSRLLKDRIILLGTEIDDEVANLVVAQLLFLQAEDPEKDISLYINSPGGSVTAGM 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG+AASMGAFLL+AG KGKR++LPNS +MIHQPLGG +G D
Sbjct: 75 AIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGVRGQAED 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A +L K LN LS TGQ E++ DTDRD FMSAEEAK YGLID ++
Sbjct: 135 IRIHAEWILKTKRQLNQILSERTGQPYERVELDTDRDNFMSAEEAKAYGLIDTII 189
>gi|336113414|ref|YP_004568181.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
coagulans 2-6]
gi|347750878|ref|YP_004858443.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
coagulans 36D1]
gi|335366844|gb|AEH52795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
coagulans 2-6]
gi|347583396|gb|AEO99662.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
coagulans 36D1]
Length = 196
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D+++N IV+QLL+L+A +P KDI +Y+NSPGGSVTAG+
Sbjct: 16 RAYDIYSRLLKDRIIMLGSAIDDNVSNSIVSQLLFLEAENPEKDIYLYINSPGGSVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDV T+CVG+AASMG+ LL+AGTKGKRY+LPNS +MIHQPLGGAQG ++
Sbjct: 76 AIYDTMQIIKPDVQTICVGMAASMGSVLLTAGTKGKRYALPNSEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +L+ +A LN LS HTGQ +E I DTDRD FMSAE+AK+YGLID ++
Sbjct: 136 IEIAAKHILYTRAKLNKILSDHTGQPIEVIERDTDRDNFMSAEKAKEYGLIDHIM 190
>gi|145635952|ref|ZP_01791637.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittAA]
gi|319897851|ref|YP_004136048.1| ATP-dependent clp protease proteolytic subunit [Haemophilus
influenzae F3031]
gi|378696913|ref|YP_005178871.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Haemophilus influenzae 10810]
gi|145266785|gb|EDK06804.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittAA]
gi|301169432|emb|CBW29032.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Haemophilus influenzae 10810]
gi|317433357|emb|CBY81736.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae F3031]
Length = 193
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 140/177 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L++ DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDINIYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PD+ T+C+G A SMGAFLL+ GT GKR +LPN+R+MIHQPLGG +G SD
Sbjct: 76 AIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVMIHQPLGGFRGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I + A E+L K LN L++HTGQ++E+I +DTDRD FMSAEEA+ YGL+D V++
Sbjct: 136 IQIHAQEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEAQVYGLVDEVLVK 192
>gi|330808572|ref|YP_004353034.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|423696404|ref|ZP_17670894.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens Q8r1-96]
gi|327376680|gb|AEA68030.1| endopeptidase Clp (ATP-dependent Clp protease proteolytic subunit
ClpP) [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|388003857|gb|EIK65184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens Q8r1-96]
Length = 211
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 109/193 (56%), Positives = 146/193 (75%), Gaps = 6/193 (3%)
Query: 99 EQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPN 152
+ GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL+L+A +P+
Sbjct: 14 QAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPD 73
Query: 153 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 212
KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG GKRY LPN
Sbjct: 74 KDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAHGKRYCLPN 133
Query: 213 SRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSA 272
SR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G+TLE+I DT+RD FMSA
Sbjct: 134 SRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSA 193
Query: 273 EEAKDYGLIDGVV 285
E A++YGLID V+
Sbjct: 194 EAAREYGLIDEVI 206
>gi|255658239|ref|ZP_05403648.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mitsuokella
multacida DSM 20544]
gi|260849549|gb|EEX69556.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mitsuokella
multacida DSM 20544]
Length = 199
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 141/180 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP++D +AN +VAQLL+L++ DP+KDI +Y+NSPGG VTAG+
Sbjct: 11 RAYDIYSRLLKDRIIFLGGPIDDAVANTVVAQLLFLESEDPDKDIHLYINSPGGVVTAGL 70
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G AASMGA LL+AG KGKRY+LPN+RIMIHQPLGGAQG +D
Sbjct: 71 AIYDTMQYIKPDVSTICIGQAASMGALLLTAGAKGKRYALPNARIMIHQPLGGAQGQSTD 130
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I +QA E+ + +N L TG+ E + +DT+RD FM+AEEAK YGL+D V+ P K
Sbjct: 131 IQIQAREIQRIREVINDILVESTGKDRETVVQDTERDNFMTAEEAKAYGLVDEVITRPVK 190
>gi|254448838|ref|ZP_05062294.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium HTCC5015]
gi|198261528|gb|EDY85817.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium HTCC5015]
Length = 236
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 108/176 (61%), Positives = 140/176 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VE+ MAN+IVAQLL+L+A +P+KDI +Y+NSPGGSVTAGM
Sbjct: 59 RAFDIYSRLLKERVIFMVGQVEEHMANLIVAQLLFLEADNPDKDISLYINSPGGSVTAGM 118
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+R I+PDVST+C+G AASMGAFLLS G KGKR++LPNS +MIHQPLGG QG +D
Sbjct: 119 AIYDTMRFIKPDVSTLCIGQAASMGAFLLSGGAKGKRFALPNSSVMIHQPLGGFQGQATD 178
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVM 286
ID+ A +L K LN L+ HTGQ E++ EDT+RD FM A+EAK+YGLID V++
Sbjct: 179 IDIHARNILKTKEKLNRMLADHTGQPFERVVEDTERDNFMGADEAKEYGLIDDVLV 234
>gi|91783520|ref|YP_558726.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
xenovorans LB400]
gi|187923896|ref|YP_001895538.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
phytofirmans PsJN]
gi|385209690|ref|ZP_10036558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. Ch1-1]
gi|116243110|sp|Q13Z15.1|CLPP2_BURXL RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|91687474|gb|ABE30674.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
xenovorans LB400]
gi|187715090|gb|ACD16314.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
phytofirmans PsJN]
gi|385182028|gb|EIF31304.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. Ch1-1]
Length = 217
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 142/174 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D AN++VAQ+L+L++ +P+KDI Y+NSPGGSV+AGM
Sbjct: 39 RSYDIYSRLLKERIVFLVGEVNDQTANLVVAQMLFLESENPDKDISFYINSPGGSVSAGM 98
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C+GLAASMGAFLL+AG KGKR++LPNSR+MIHQPLGGA+G SD
Sbjct: 99 AIYDTMQFIKPDVSTLCMGLAASMGAFLLAAGAKGKRFALPNSRVMIHQPLGGARGQASD 158
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++QA E+L+ K LN L++HTGQ +E+I DTDRD FMS ++A+ YGL+D V
Sbjct: 159 IEIQAREILYLKERLNHLLAHHTGQPVERIARDTDRDNFMSGDDAQAYGLVDQV 212
>gi|365848314|ref|ZP_09388791.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Yokenella regensburgei ATCC 43003]
gi|364571022|gb|EHM48621.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Yokenella regensburgei ATCC 43003]
Length = 220
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 101/172 (58%), Positives = 140/172 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 45 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 104
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 105 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 164
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L KA +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 165 HAKEILKVKARMNELMAHHTGQSLEQIENDTERDRFLSAGEAVEYGLVDSIL 216
>gi|332283982|ref|YP_004415893.1| ATP-dependent Clp protease proteolytic subunit [Pusillimonas sp.
T7-7]
gi|330427935|gb|AEC19269.1| ATP-dependent Clp protease proteolytic subunit [Pusillimonas sp.
T7-7]
Length = 218
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 142/177 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPV D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV AGM
Sbjct: 37 RSYDIYSRLLRERVIFFVGPVNDHTANLVVAQLLFLESENPDKDISLYINSPGGSVYAGM 96
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C G+AASMGAFLL+AG KGKRY+LPNSRIMIHQP GGAQG SD
Sbjct: 97 AIYDTMQFIKPDVSTLCTGIAASMGAFLLAAGAKGKRYTLPNSRIMIHQPSGGAQGQASD 156
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I +QA E+L + LN L+ +TGQ +E+I EDT+RD FMSAE+A YGL+D V+++
Sbjct: 157 IQIQAREILSLRERLNTILAKNTGQPVERIAEDTERDNFMSAEDAVSYGLVDKVLVS 213
>gi|268592036|ref|ZP_06126257.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Providencia
rettgeri DSM 1131]
gi|422010033|ref|ZP_16357015.1| ATP-dependent Clp protease proteolytic subunit [Providencia
rettgeri Dmel1]
gi|291312428|gb|EFE52881.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Providencia
rettgeri DSM 1131]
gi|414092206|gb|EKT53885.1| ATP-dependent Clp protease proteolytic subunit [Providencia
rettgeri Dmel1]
Length = 206
Score = 226 bits (576), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 102/174 (58%), Positives = 140/174 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AGTKGKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 89 SIYDTMQFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++ A E+L K+ +N ++ HTG+++E+I DT+RD F+SA EAK+YGL+D +
Sbjct: 149 IEIHAQEILKVKSRMNELMALHTGKSIEEITRDTERDRFLSANEAKEYGLVDQI 202
>gi|407793809|ref|ZP_11140840.1| ATP-dependent Clp protease proteolytic subunit [Idiomarina
xiamenensis 10-D-4]
gi|407213963|gb|EKE83814.1| ATP-dependent Clp protease proteolytic subunit [Idiomarina
xiamenensis 10-D-4]
Length = 206
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 110/206 (53%), Positives = 151/206 (73%), Gaps = 7/206 (3%)
Query: 80 IRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANII 139
+ +DL+ P + +P + G R ++ S+L + R+I C G +ED MAN+I
Sbjct: 1 MNSDLQDPLAQLVPMVVEQTSRGE-------RSYDIYSRLLKERVIFCCGQIEDHMANLI 53
Query: 140 VAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLL 199
VAQLL+L++ +P+KDI +Y+NSPGG VTAGMAI+DT+R I+PDVSTVC+G AASMGAFLL
Sbjct: 54 VAQLLFLESDNPDKDIYLYINSPGGVVTAGMAIYDTMRFIKPDVSTVCMGQAASMGAFLL 113
Query: 200 SAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEK 259
+ G KGKRY LPNSR+MIHQPLGG QG SD ++ A ++L+ K LN L+ +TG+ +
Sbjct: 114 AGGAKGKRYCLPNSRVMIHQPLGGFQGQASDFEIHAKQILYLKDKLNRMLADNTGKDYDV 173
Query: 260 INEDTDRDFFMSAEEAKDYGLIDGVV 285
I +DTDRD FMSAE++ DYGL+DG++
Sbjct: 174 IAKDTDRDNFMSAEQSVDYGLVDGIL 199
>gi|220909724|ref|YP_002485035.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7425]
gi|219866335|gb|ACL46674.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7425]
Length = 236
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 146/195 (74%), Gaps = 8/195 (4%)
Query: 111 RFQNVLSQLFQHRII------RCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGG 164
R ++ S+L + RII G ++D +A+ IVAQLL+LD+ DP +DI +Y+NSPGG
Sbjct: 41 RAFDIYSRLLRERIIFLGGGGSNGRGIDDALADSIVAQLLFLDSEDPERDIYLYINSPGG 100
Query: 165 SVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGA 224
SVTAGMAI+DTI+H+ DV T+C GLAASMGAFLL+ G GKR +LP+SRIMIHQPLGGA
Sbjct: 101 SVTAGMAIYDTIQHVHADVCTICFGLAASMGAFLLAGGAAGKRMALPHSRIMIHQPLGGA 160
Query: 225 QGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
QG DI++QA E+L+HK LN L++HTGQ E+I DT+RDFFMSAEEAK+YGL+D V
Sbjct: 161 QGQAVDIEIQAKEILYHKRKLNELLAHHTGQPFERIEADTERDFFMSAEEAKNYGLVDQV 220
Query: 285 V--MNPHKILQPVAA 297
+ N +PVAA
Sbjct: 221 ITRQNLPSRSEPVAA 235
>gi|442611657|ref|ZP_21026363.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
gi|441747585|emb|CCQ12425.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
Length = 205
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 112/206 (54%), Positives = 146/206 (70%), Gaps = 7/206 (3%)
Query: 80 IRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANII 139
+RN + P + +P + G R ++ S+L + R+I G VED MAN+I
Sbjct: 1 MRNGMIDPLNALVPMVVEQTAKGE-------RSYDIYSRLLKERVIFMTGQVEDHMANLI 53
Query: 140 VAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLL 199
VAQLL+L++ P KDI +Y+NSPGGSVTAGM+I+DT+ I+PDVSTVC+G AASMGAFLL
Sbjct: 54 VAQLLFLESESPEKDIFLYINSPGGSVTAGMSIYDTMNFIKPDVSTVCIGQAASMGAFLL 113
Query: 200 SAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEK 259
S G KGKR+ LPNSR+MIHQPLGG QG SD ++ A E+L KA LN L+ H+GQ LE
Sbjct: 114 SGGAKGKRFCLPNSRVMIHQPLGGFQGQASDFEIHAKEILSIKAKLNRLLAEHSGQPLEV 173
Query: 260 INEDTDRDFFMSAEEAKDYGLIDGVV 285
I DTDRD FM+A++A DYG++D V+
Sbjct: 174 IERDTDRDNFMNAQQAVDYGIVDSVL 199
>gi|411118653|ref|ZP_11391034.1| protease subunit of ATP-dependent protease [Oscillatoriales
cyanobacterium JSC-12]
gi|410712377|gb|EKQ69883.1| protease subunit of ATP-dependent protease [Oscillatoriales
cyanobacterium JSC-12]
Length = 199
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 115/201 (57%), Positives = 151/201 (75%), Gaps = 13/201 (6%)
Query: 86 VPSSPY-IPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
+PS PY +P GGG ++ N+ +LF+ RII V+D +AN IVA LL
Sbjct: 5 IPSVPYRLP-------GGG-----YEQWINIYERLFRERIIFLSEEVDDGIANAIVAYLL 52
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
YLD+ D +K I +Y+NSPGGSVTAGMAIFDT++HI+ +V T+CVGLAASMGAFLL+AG+K
Sbjct: 53 YLDSDDQSKPIYLYINSPGGSVTAGMAIFDTMQHIKSEVVTICVGLAASMGAFLLAAGSK 112
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKR +LP++RIMIHQPLGG++G +DI+++A E+L + LN L+ TGQ LEKI DT
Sbjct: 113 GKRLALPHARIMIHQPLGGSRGQATDIEIEAREILRIRQQLNEILAERTGQPLEKIERDT 172
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
DRD+FMSA+EAK+YGLID V+
Sbjct: 173 DRDYFMSAQEAKEYGLIDQVI 193
>gi|407789641|ref|ZP_11136741.1| ATP-dependent Clp protease proteolytic subunit [Gallaecimonas
xiamenensis 3-C-1]
gi|407206301|gb|EKE76259.1| ATP-dependent Clp protease proteolytic subunit [Gallaecimonas
xiamenensis 3-C-1]
Length = 203
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 107/174 (61%), Positives = 139/174 (79%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQLL+L+A +P KDI +Y+NSPGGSVTAGMAI+
Sbjct: 29 DIYSRLLKERVIFLTGQVEDHMANLIVAQLLFLEAENPEKDIHLYINSPGGSVTAGMAIY 88
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+ DVST+C+G AASMGAFLL+ G KGKR+ LPN+R+MIHQPLGG QG SDI++
Sbjct: 89 DTMQFIKADVSTLCIGQAASMGAFLLAGGAKGKRHCLPNARVMIHQPLGGFQGQASDIEI 148
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
A E+L K LN L+ HTGQ+LE I +DTDRD FM+AE+A +YGL+D V+ N
Sbjct: 149 HAREILFIKDRLNRLLADHTGQSLETIAQDTDRDRFMTAEQAMEYGLVDSVLAN 202
>gi|307722032|ref|YP_003893172.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sulfurimonas
autotrophica DSM 16294]
gi|306980125|gb|ADN10160.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sulfurimonas
autotrophica DSM 16294]
Length = 196
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 114/200 (57%), Positives = 144/200 (72%), Gaps = 7/200 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
YIP Y + G G R ++ S+L + RI+ G V D +A+ IVAQ L+L+A D
Sbjct: 3 YIP-YVVEKTGRGE------RSYDIYSRLLKDRIVMLSGEVNDAVASTIVAQFLFLEAED 55
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P KDI Y+NSPGG VTAG+AIFDT+ +IRP V+T+C+G AASMGAFLLS G KGKRY+L
Sbjct: 56 PEKDIYFYINSPGGVVTAGLAIFDTMNYIRPHVATICIGQAASMGAFLLSCGEKGKRYAL 115
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
P++RIMIHQPLGGAQG +DI +QA E+L K LNG L+ +TGQ ++ I DTDRD FM
Sbjct: 116 PHARIMIHQPLGGAQGQATDIAIQAEEILRMKKELNGILAKNTGQNIKTIEADTDRDNFM 175
Query: 271 SAEEAKDYGLIDGVVMNPHK 290
SA EAKDYG+ID V++ K
Sbjct: 176 SAAEAKDYGMIDEVLVKNDK 195
>gi|33241265|ref|NP_876207.1| protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|67460520|sp|Q7V9L6.1|CLPP3_PROMA RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|33238795|gb|AAQ00860.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 216
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 116/216 (53%), Positives = 153/216 (70%), Gaps = 13/216 (6%)
Query: 70 CESTWKGIWSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGG 129
++ WKG DL +PT + + G G R ++ S+L + RII G
Sbjct: 10 VQNKWKG------DLPCSGPGVLPTVIE-QSGRGE------RAFDIYSRLLRERIIFLGT 56
Query: 130 PVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVG 189
V D +A+ +VAQ+L+L+A DP KDI +Y+NSPGGSVTAG+AI+DT++ + PD+ T+C G
Sbjct: 57 DVNDQIADALVAQMLFLEAEDPEKDIQLYINSPGGSVTAGLAIYDTMQQVNPDIVTMCYG 116
Query: 190 LAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYL 249
LAASMGAFLL+ G+KGKR +LPNSRIMIHQPLGGAQG +I++QA E+L K LN L
Sbjct: 117 LAASMGAFLLAGGSKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKETLNNLL 176
Query: 250 SYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
+ HTGQ+LEKI+EDTDRD F+S +EA +YGLID VV
Sbjct: 177 AEHTGQSLEKISEDTDRDHFLSPQEAVEYGLIDKVV 212
>gi|293375439|ref|ZP_06621720.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Turicibacter
sanguinis PC909]
gi|325844477|ref|ZP_08168204.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Turicibacter sp. HGF1]
gi|292645992|gb|EFF64021.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Turicibacter
sanguinis PC909]
gi|325489151|gb|EGC91535.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Turicibacter sp. HGF1]
Length = 199
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 109/183 (59%), Positives = 139/183 (75%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G + D ANI+VAQLL+L A DP+KDI +Y+NSPGGSVTAG+
Sbjct: 17 RAYDIYSRLLKDRIIMLSGEINDHTANIVVAQLLFLAAEDPDKDINIYINSPGGSVTAGL 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT+ +I+ DVST+CVG+AASMGAFLL+AGTKGKRY LPNS +MIHQPLGGAQG ++
Sbjct: 77 AIFDTMNYIKCDVSTICVGMAASMGAFLLTAGTKGKRYVLPNSEVMIHQPLGGAQGQATE 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I + A +L + LN L+ TGQ LEKI +DT+RD FMSA+EA YGL+D VV P
Sbjct: 137 IAIAAKHILKTRDRLNKILAEQTGQPLEKIEQDTERDNFMSADEAVAYGLVDQVVTRPTD 196
Query: 291 ILQ 293
+ +
Sbjct: 197 VTK 199
>gi|254514393|ref|ZP_05126454.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium NOR5-3]
gi|219676636|gb|EED33001.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium NOR5-3]
Length = 213
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R++ G VED MAN+IVAQLL+L++ +P+KDI +Y+NSPGGSVTAG+
Sbjct: 30 RSYDIYSRLLKERVVFVVGQVEDHMANLIVAQLLFLESENPDKDIHLYINSPGGSVTAGL 89
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PD+ST+C+G AASMGAFLLS GTKGKRY LPN+R MIHQP GGAQG +D
Sbjct: 90 SIYDTMQFIKPDISTMCLGQAASMGAFLLSGGTKGKRYCLPNARTMIHQPSGGAQGQATD 149
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
ID+QA E+L + LN ++ HTGQ LE I DT+RD FM AE++K+YGL+D VV
Sbjct: 150 IDIQAKEILIIRERLNRLMAEHTGQPLEVIERDTERDRFMDAEQSKEYGLVDEVV 204
>gi|304395499|ref|ZP_07377382.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
aB]
gi|440758262|ref|ZP_20937433.1| ATP-dependent Clp protease proteolytic subunit [Pantoea agglomerans
299R]
gi|304356793|gb|EFM21157.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
aB]
gi|436428046|gb|ELP25712.1| ATP-dependent Clp protease proteolytic subunit [Pantoea agglomerans
299R]
Length = 207
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AGTKGKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 89 SIYDTMKFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L K +N ++ HTG+TLE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 149 IEIHAREILKVKQRMNELMAEHTGKTLEEIERDTERDRFLSASEAVEYGLVDSIL 203
>gi|302871325|ref|YP_003839961.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor obsidiansis OB47]
gi|302574184|gb|ADL41975.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor obsidiansis OB47]
Length = 195
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G + DD+A++IVAQLL+L+A DP+KDI +Y+NSPGGSVTAG
Sbjct: 17 RAYDIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPGGSVTAGF 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG+AASMGAFLL+AG KGKR++LPNS IMIHQPLGG +G +D
Sbjct: 77 AIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGVRGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A +L K +N LS TGQ +E I DTDRDFFM+AEEA YG+ID V+
Sbjct: 137 IKIHAEWILKIKNRINKILSERTGQPIEVIERDTDRDFFMTAEEALKYGIIDRVI 191
>gi|332798601|ref|YP_004460100.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|438001582|ref|YP_007271325.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|332696336|gb|AEE90793.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|432178376|emb|CCP25349.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
Length = 194
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D +A++ +AQ+LYL++ DP+KDI +Y+NSPGGSVTAG+
Sbjct: 16 RAYDIYSRLLKERIIFIGTSIDDTVASLAIAQMLYLESEDPDKDIRLYINSPGGSVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+GLAASMGA LL+AGT+GKRY+LPNSRIMIHQP GG QG D
Sbjct: 76 AIYDTMQYIKPDVSTICMGLAASMGAVLLAAGTEGKRYALPNSRIMIHQPWGGVQGKAVD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I+ A E+L + LN L+ HT Q++EKI +DTDRD+FMS++EA +YGLID V+
Sbjct: 136 IETHAKEILRLRELLNEILANHTKQSIEKIEKDTDRDYFMSSKEALEYGLIDEVI 190
>gi|397167167|ref|ZP_10490610.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
radicincitans DSM 16656]
gi|396091313|gb|EJI88880.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
radicincitans DSM 16656]
Length = 207
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 140/172 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F++A+EA DYGL+D ++
Sbjct: 152 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLAAQEAVDYGLVDSIL 203
>gi|407713410|ref|YP_006833975.1| ATP-dependent Clp protease, protease subunit [Burkholderia
phenoliruptrix BR3459a]
gi|407235594|gb|AFT85793.1| ATP-dependent Clp protease, protease subunit [Burkholderia
phenoliruptrix BR3459a]
Length = 211
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 142/174 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D AN++VAQ+L+L++ +P+KDI Y+NSPGGSV+AGM
Sbjct: 33 RSYDIYSRLLKERIVFLVGEVNDQTANLVVAQMLFLESENPDKDIYFYINSPGGSVSAGM 92
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C+GLAASMGAFLL+AG KGKR++LPNSR+MIHQPLGGA+G SD
Sbjct: 93 AIYDTMQFIKPDVSTLCMGLAASMGAFLLAAGAKGKRFALPNSRVMIHQPLGGARGQASD 152
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++QA E+L+ K LN L++HTGQ +E+I DTDRD FMS ++A+ YGL+D V
Sbjct: 153 IEIQAREILYLKERLNHLLAHHTGQPVERIARDTDRDNFMSGDDAQAYGLVDQV 206
>gi|398923822|ref|ZP_10660915.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM48]
gi|398174659|gb|EJM62448.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM48]
Length = 211
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 149/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDVQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+V+T C+G A SMGAFLL+AG
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVATTCIGQACSMGAFLLTAGAP 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKRY LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G+TLE+I DT
Sbjct: 126 GKRYCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE A++YGLID V+
Sbjct: 186 NRDNFMSAEAAREYGLIDEVI 206
>gi|119898362|ref|YP_933575.1| ATP-dependent Clp protease proteolytic subunit [Azoarcus sp. BH72]
gi|166201798|sp|A1K783.1|CLPP_AZOSB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|119670775|emb|CAL94688.1| Endopeptidase Clp [Azoarcus sp. BH72]
Length = 212
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R++ GPV D AN+IVAQLL+L++ +P+KDI Y+NSPGGSVTAG+
Sbjct: 32 RSYDIYSRLLKERVVFLVGPVNDVTANLIVAQLLFLESENPDKDIYFYINSPGGSVTAGL 91
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+P+VST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 92 AIYDTMQFIKPNVSTLCIGQAASMGAFLLAAGEKGKRFCLPNSRVMIHQPLGGFQGQASD 151
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L+ + LNG L+ HTGQT+E+I +DTDRD FMSA A +YGL+D V+
Sbjct: 152 IEIHAREILYLRERLNGMLAKHTGQTIEQIEKDTDRDNFMSATAAVEYGLVDKVL 206
>gi|317970010|ref|ZP_07971400.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CB0205]
Length = 196
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/172 (64%), Positives = 134/172 (77%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G PV + AN IVAQLL+L+A DP KDI +Y+NSPGGSV G+ IF
Sbjct: 17 DIYSRLLRERIVFLGEPVTSESANRIVAQLLFLEAEDPEKDIFLYINSPGGSVYDGLGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HI+PDV TVCVGLAASMGAFLL AG KGKR SL +SRIMIHQPLGGAQG SDI +
Sbjct: 77 DTMQHIKPDVQTVCVGLAASMGAFLLCAGAKGKRSSLTHSRIMIHQPLGGAQGQASDIRI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA+E+L+ K LN LS TGQ L +I +DTDRDFFMS EA +YGLID V+
Sbjct: 137 QADEILYLKKKLNQELSDRTGQPLNRIEDDTDRDFFMSPAEAVEYGLIDKVI 188
>gi|333375817|ref|ZP_08467617.1| ATP-dependent Clp protease, protease subunit [Kingella kingae ATCC
23330]
gi|332969605|gb|EGK08623.1| ATP-dependent Clp protease, protease subunit [Kingella kingae ATCC
23330]
Length = 205
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/210 (53%), Positives = 155/210 (73%), Gaps = 9/210 (4%)
Query: 84 LEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQL 143
L++ ++ IPT + + G G R ++ S+L + RII GPV D AN++VAQ+
Sbjct: 2 LDIQNNTLIPTVIE-QSGRGE------RAFDIYSRLLKERIIFLVGPVNDQTANLVVAQM 54
Query: 144 LYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGT 203
L+L++ +P+KDI Y+NSPGGSVTAGM+I+DT++ I+PDV T+C+G AASMGAFLLSAGT
Sbjct: 55 LFLESENPDKDIYFYINSPGGSVTAGMSIYDTMKFIKPDVQTLCLGQAASMGAFLLSAGT 114
Query: 204 KGKRYSLPNSRIMIHQPL--GGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKIN 261
KGKR++LPNSR+MIHQPL GG G SDI++ A E+L K LN L+ HTG+TL ++
Sbjct: 115 KGKRFALPNSRVMIHQPLISGGLGGQASDIEIHARELLKLKEKLNQMLAEHTGKTLAEVE 174
Query: 262 EDTDRDFFMSAEEAKDYGLIDGVVMNPHKI 291
DTDRD FMSA+EA +YGLID V+ + +++
Sbjct: 175 RDTDRDNFMSAQEAMEYGLIDKVITSRNEV 204
>gi|87123284|ref|ZP_01079135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9917]
gi|86169004|gb|EAQ70260.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9917]
Length = 199
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/172 (62%), Positives = 138/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G ++D +A+ +VAQLL+L+A DP K+I +Y+NSPGGSVTAG+AI+
Sbjct: 16 DIYSRLLRERIIFLGTGIDDQVADALVAQLLFLEAEDPEKEIQIYINSPGGSVTAGLAIY 75
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ + PDV T+C GLAASMGAFLLS GTKGKR +LP++RIMIHQPLGGAQG DI++
Sbjct: 76 DTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPSARIMIHQPLGGAQGQAVDIEI 135
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L K LNG ++ HTGQ LEKI EDTDRD+F+S EA +YGLID VV
Sbjct: 136 QAQEILFLKDTLNGLMAEHTGQPLEKIAEDTDRDYFLSPAEAVEYGLIDRVV 187
>gi|295676517|ref|YP_003605041.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1002]
gi|295436360|gb|ADG15530.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1002]
Length = 217
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 142/174 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D AN++VAQ+L+L++ +P+KDI Y+NSPGGSV+AGM
Sbjct: 39 RSYDIYSRLLKERIVFLVGEVNDQTANLVVAQMLFLESENPDKDIYFYINSPGGSVSAGM 98
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C+GLAASMGAFLL+AG KGKR++LPNSR+MIHQPLGGA+G SD
Sbjct: 99 AIYDTMQFIKPDVSTLCMGLAASMGAFLLAAGAKGKRFALPNSRVMIHQPLGGARGQASD 158
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++QA E+L+ K LN L++HTGQ +E+I DTDRD FMS ++A+ YGL+D V
Sbjct: 159 IEIQAREILYLKDRLNHLLAHHTGQPVERIARDTDRDNFMSGDDAQAYGLVDQV 212
>gi|291278625|ref|YP_003495460.1| ATP-dependent Clp protease proteolytic subunit [Deferribacter
desulfuricans SSM1]
gi|290753327|dbj|BAI79704.1| ATP-dependent Clp protease, proteolytic subunit [Deferribacter
desulfuricans SSM1]
Length = 195
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/197 (54%), Positives = 148/197 (75%), Gaps = 7/197 (3%)
Query: 89 SPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDA 148
S Y+P Y + G G R ++ S+L + RII G ++D++AN+++AQ+L+L+A
Sbjct: 2 SFYVP-YVVEQTGRGE------RVYDIYSRLLKDRIIFLGTAIDDNVANVVIAQMLFLEA 54
Query: 149 VDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRY 208
DP+KDI +Y+NSPGG +T+G+AI+DT+ +I+PDVST+C+G AASM A LLS+G KGKR+
Sbjct: 55 EDPDKDIYLYINSPGGVITSGLAIYDTMNYIKPDVSTICIGQAASMAAVLLSSGAKGKRF 114
Query: 209 SLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDF 268
+LPN+RIMIHQPLGG QG DI++ ANE+L K LN LS +TGQ +EKI D+DRDF
Sbjct: 115 ALPNARIMIHQPLGGFQGQAKDIEIHANEILRMKKMLNEILSKNTGQPIEKIEMDSDRDF 174
Query: 269 FMSAEEAKDYGLIDGVV 285
FMSA EAK+YGLID +
Sbjct: 175 FMSAMEAKEYGLIDDCI 191
>gi|288818082|ref|YP_003432430.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenobacter
thermophilus TK-6]
gi|384128847|ref|YP_005511460.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobacter thermophilus TK-6]
gi|288787482|dbj|BAI69229.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenobacter
thermophilus TK-6]
gi|308751684|gb|ADO45167.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobacter thermophilus TK-6]
Length = 199
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L Q RI+ G P++D +AN+IVAQLL+L+A DP KDI MY+NSPGGSVTAGM
Sbjct: 21 RAYDIYSRLLQDRIVLLGYPIDDHVANLIVAQLLFLEAQDPEKDIYMYINSPGGSVTAGM 80
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDV T+C+G AASMGA LL+AG GKRY+LP+SRIMIHQPLGG G +D
Sbjct: 81 AIYDTMQYIKPDVVTICIGQAASMGAVLLAAGAPGKRYALPHSRIMIHQPLGGITGQATD 140
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+ K LN LS HTGQ LE+I D +RD+FMS+EEA++YG++D V+
Sbjct: 141 IIIHAEEIKRIKHMLNEILSKHTGQPLERIERDVERDYFMSSEEAREYGIVDRVI 195
>gi|88705172|ref|ZP_01102884.1| ATP-dependent Clp protease, proteolytic subunit [Congregibacter
litoralis KT71]
gi|88700867|gb|EAQ97974.1| ATP-dependent Clp protease, proteolytic subunit [Congregibacter
litoralis KT71]
Length = 206
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R++ G VED MAN+IVAQLL+L++ +P+KDI +Y+NSPGGSVTAG+
Sbjct: 23 RSYDIYSRLLKERVVFVVGQVEDHMANLIVAQLLFLESENPDKDIHLYINSPGGSVTAGL 82
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PD+ST+C+G AASMGAFLLS GTKGKRY LPN+R MIHQP GGAQG +D
Sbjct: 83 SIYDTMQFIKPDISTMCLGQAASMGAFLLSGGTKGKRYCLPNARTMIHQPSGGAQGQATD 142
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
ID+QA E+L + LN ++ HTGQ LE I DT+RD FM AE++K+YGL+D VV
Sbjct: 143 IDIQAKEILIIRERLNRLMAEHTGQPLEVIERDTERDRFMDAEQSKEYGLVDEVV 197
>gi|452995870|emb|CCQ92258.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
ultunense Esp]
Length = 197
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D AN++VAQLL+L A DP+KDI +Y+NSPGGS+TAGM
Sbjct: 15 RAYDIYSRLLKDRIIVLGSEIDDANANLVVAQLLFLAAEDPDKDIYLYINSPGGSITAGM 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+P VST+C+G+AASMGAFLL+AG KGKRY+LPNS +MIHQPLGG +G D
Sbjct: 75 AIYDTMQFIKPPVSTICIGIAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGVRGQAED 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A+ +L + +N L+ TGQ LE+I +DTDRDFFMSAEEAK+YG++D V+
Sbjct: 135 IRIHADWILRTREKINQILAERTGQPLERIAKDTDRDFFMSAEEAKEYGIVDAVI 189
>gi|398919614|ref|ZP_10658869.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM49]
gi|398169636|gb|EJM57614.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM49]
Length = 211
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 149/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+V+T C+G A SMGAFLL+AG
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVATTCIGQACSMGAFLLTAGAP 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKRY LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G+TLE+I DT
Sbjct: 126 GKRYCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAMHSGRTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE A++YGLID V+
Sbjct: 186 NRDNFMSAEAAREYGLIDEVI 206
>gi|288549991|ref|ZP_05968896.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
cancerogenus ATCC 35316]
gi|288316903|gb|EFC55841.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
cancerogenus ATCC 35316]
Length = 194
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 19 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 78
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 79 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 138
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L KA +N ++ HTGQ+LE+I DT+RD F+SA EA +YGL+D V+
Sbjct: 139 HAREILKVKARMNELMAQHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSVL 190
>gi|116071740|ref|ZP_01469008.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. BL107]
gi|116065363|gb|EAU71121.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. BL107]
Length = 224
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V+D +A+ +VAQ+L+L+A DP KDI +Y+NSPGGSVTAG+
Sbjct: 38 RAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYVNSPGGSVTAGL 97
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ + PDV T+C GLAASMGAFLLS GTKGKR +LPN+RIMIHQPLGGAQG D
Sbjct: 98 AIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVD 157
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L K LNG ++ HTGQ L KI+EDTDRD+F+S EA +YGLID VV
Sbjct: 158 IEIQAKEILFLKETLNGLMAEHTGQPLAKISEDTDRDYFLSPAEAVEYGLIDRVV 212
>gi|393776900|ref|ZP_10365194.1| ClpP protein [Ralstonia sp. PBA]
gi|392716257|gb|EIZ03837.1| ClpP protein [Ralstonia sp. PBA]
Length = 217
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/211 (54%), Positives = 157/211 (74%), Gaps = 7/211 (3%)
Query: 81 RNDLEVPSSPYIPTYAQGEQGGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDD 134
RNDL + A QG G PM++ GR + ++ S+L + R++ G V D
Sbjct: 3 RNDL-LDRMVTTQASALDTQGLGLVPMVVEQSGRGERAFDIYSRLLKERVVFLVGEVNDQ 61
Query: 135 MANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASM 194
AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AG+AI+DT++ I+PDVST+C+G+AASM
Sbjct: 62 TANLVVAQLLFLESENPDKDISLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCMGMAASM 121
Query: 195 GAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTG 254
GAFLL+AG KGKR++LPNSRIMIHQPLGGA+G SDI++QA E+L+ + LN LS TG
Sbjct: 122 GAFLLAAGAKGKRFALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNQILSDVTG 181
Query: 255 QTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
Q +EKI DTDRD FMSA++A +YGLID +
Sbjct: 182 QPVEKIARDTDRDNFMSADQAVEYGLIDKAI 212
>gi|359796110|ref|ZP_09298715.1| ATP-dependent Clp protease proteolytic subunit [Achromobacter
arsenitoxydans SY8]
gi|359365796|gb|EHK67488.1| ATP-dependent Clp protease proteolytic subunit [Achromobacter
arsenitoxydans SY8]
Length = 217
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPV D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV AGM
Sbjct: 37 RAYDIYSRLLRERLIFLVGPVNDATANLVVAQLLFLESENPDKDISLYINSPGGSVYAGM 96
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT++ ++PDVST+C GLAASMGAFLL+AG KGKR++LPNSRIMIHQP GGAQG SD
Sbjct: 97 AIFDTMQFVKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRIMIHQPSGGAQGQASD 156
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I +QA E+L + LN LS +TGQ++E+I DT+RD FMSAE+A YGL+D V+
Sbjct: 157 IQIQAREILDLRERLNRILSQNTGQSMERIELDTERDNFMSAEDAVSYGLVDKVM 211
>gi|209521458|ref|ZP_03270166.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. H160]
gi|209498114|gb|EDZ98261.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. H160]
Length = 217
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 142/174 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D AN++VAQ+L+L++ +P+KDI Y+NSPGGSV+AGM
Sbjct: 39 RSYDIYSRLLKERIVFLVGEVNDQTANLVVAQMLFLESENPDKDIYFYINSPGGSVSAGM 98
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C+GLAASMGAFLL+AG KGKR++LPNSR+MIHQPLGGA+G SD
Sbjct: 99 AIYDTMQFIKPDVSTLCMGLAASMGAFLLAAGAKGKRFALPNSRVMIHQPLGGARGQASD 158
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++QA E+L+ K LN L++HTGQ +E+I DTDRD FMS ++A+ YGL+D V
Sbjct: 159 IEIQAREILYLKDRLNHLLAHHTGQPVERIARDTDRDNFMSGDDAQAYGLVDQV 212
>gi|271499597|ref|YP_003332622.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya
dadantii Ech586]
gi|270343152|gb|ACZ75917.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya
dadantii Ech586]
Length = 207
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDYMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G AASMGAFLL+AGTKGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQAASMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGFQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ HTGQ+L+ I DT+RD F+SA EA +YGL+D V+
Sbjct: 149 IEIHAKEILKVKARMNELMAKHTGQSLDVIERDTERDRFLSAAEAVEYGLVDSVL 203
>gi|398871356|ref|ZP_10626671.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM74]
gi|398206297|gb|EJM93064.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM74]
Length = 211
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 149/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+V+T C+G A SMGAFLL+AG
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVATTCIGQACSMGAFLLTAGAP 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKRY LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G+TLE+I DT
Sbjct: 126 GKRYCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAQHSGRTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE A++YGLID V+
Sbjct: 186 NRDNFMSAEAAREYGLIDEVI 206
>gi|440741131|ref|ZP_20920586.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens BRIP34879]
gi|447917344|ref|YP_007397912.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas poae
RE*1-1-14]
gi|440373752|gb|ELQ10500.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens BRIP34879]
gi|445201207|gb|AGE26416.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas poae
RE*1-1-14]
Length = 211
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 148/201 (73%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG +
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAE 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKR+ LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G TLE+I DT
Sbjct: 126 GKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGHTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE A+ YGLID V+
Sbjct: 186 NRDNFMSAEAARAYGLIDAVI 206
>gi|444352821|ref|YP_007388965.1| ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
[Enterobacter aerogenes EA1509E]
gi|443903651|emb|CCG31425.1| ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
[Enterobacter aerogenes EA1509E]
Length = 220
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 45 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 104
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 105 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 164
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 165 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSASEAVEYGLVDSIL 216
>gi|51246390|ref|YP_066274.1| ATP-dependent Clp protease, proteolytic subunit (ClpP)
[Desulfotalea psychrophila LSv54]
gi|50877427|emb|CAG37267.1| probable ATP-dependent Clp protease, proteolytic subunit (ClpP)
[Desulfotalea psychrophila LSv54]
Length = 213
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 106/181 (58%), Positives = 142/181 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V DD+AN+IVAQLL+L+A DP KDI Y+NSPGGSVTAGM
Sbjct: 26 RSYDIYSRLLKERIIFLGSGVNDDVANVIVAQLLFLEAEDPEKDITFYINSPGGSVTAGM 85
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+ D++T+C+G AASMGA LL+AGT GKRY+LPNSRIMIHQPLGG QG +D
Sbjct: 86 AIYDTMQYIKCDIATLCMGQAASMGAVLLAAGTAGKRYALPNSRIMIHQPLGGFQGQATD 145
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ E+L + +LN L++HTG+TL+KI DT+RD FMS+ EA+ YGLID V++
Sbjct: 146 IEIHTKEILRIRKDLNNILAHHTGKTLKKIESDTERDNFMSSVEAQKYGLIDEVLVKRED 205
Query: 291 I 291
+
Sbjct: 206 V 206
>gi|404379126|ref|ZP_10984194.1| ATP-dependent Clp protease proteolytic subunit [Simonsiella
muelleri ATCC 29453]
gi|294483471|gb|EFG31156.1| ATP-dependent Clp protease proteolytic subunit [Simonsiella
muelleri ATCC 29453]
Length = 206
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/209 (55%), Positives = 150/209 (71%), Gaps = 9/209 (4%)
Query: 85 EVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
E+ ++ IPT + + G G R ++ S+L + RII GPV D AN++VAQLL
Sbjct: 4 EIQNNTLIPTVIE-QSGRGE------RAFDIYSRLLKERIIFLVGPVNDHTANLVVAQLL 56
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L++ +P+KDI Y+NSPGGSV+AGM+IFDT+ I+PDV T+C+G AASMGAFLLSAG K
Sbjct: 57 FLESENPDKDIYFYINSPGGSVSAGMSIFDTMNFIKPDVQTLCLGQAASMGAFLLSAGAK 116
Query: 205 GKRYSLPNSRIMIHQPL--GGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINE 262
GKR++LPNSRIMIHQPL GG G SDI++ A E++ K LN L+ HTGQ LEKI
Sbjct: 117 GKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELIKLKEKLNNLLAKHTGQPLEKIER 176
Query: 263 DTDRDFFMSAEEAKDYGLIDGVVMNPHKI 291
DTDRD FMSA+ A +YGLID V+ N ++
Sbjct: 177 DTDRDNFMSAQTAMEYGLIDKVITNREEV 205
>gi|312796430|ref|YP_004029352.1| ATP-dependent endopeptidase clp proteolytic subunit clpP
[Burkholderia rhizoxinica HKI 454]
gi|312168205|emb|CBW75208.1| ATP-dependent endopeptidase clp proteolytic subunit clpP (EC
3.4.21.92) [Burkholderia rhizoxinica HKI 454]
Length = 238
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R++ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 60 RAYDIYSRLLKERLVFLVGEVNDQAANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 119
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDV+T+C+GLAASMGAFLL+AG KGKR +LPN+R+MIHQPLGGA+G SD
Sbjct: 120 AIYDTMQFIKPDVTTLCMGLAASMGAFLLAAGAKGKRIALPNARVMIHQPLGGARGQASD 179
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L K LN L+ HTGQ +E+I DTDRD FMSAE+A+ YGLID V+
Sbjct: 180 IEIQAREILFLKERLNNLLAQHTGQPVEQIQRDTDRDNFMSAEDAQAYGLIDQVL 234
>gi|308185908|ref|YP_003930039.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Pantoea vagans C9-1]
gi|372276432|ref|ZP_09512468.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
SL1_M5]
gi|390435716|ref|ZP_10224254.1| ATP-dependent Clp protease proteolytic subunit [Pantoea agglomerans
IG1]
gi|308056418|gb|ADO08590.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Pantoea vagans C9-1]
Length = 207
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AGTKGKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 89 SIYDTMKFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L K +N ++ HTG+TLE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 149 IEIHAREILKVKQRMNELMAEHTGKTLEEIERDTERDRFLSANEAVEYGLVDSIL 203
>gi|261346364|ref|ZP_05974008.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Providencia
rustigianii DSM 4541]
gi|282565678|gb|EFB71213.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Providencia
rustigianii DSM 4541]
Length = 206
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 142/174 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AGTKGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++ A E+L K+ +N +++HTG+++E+I+ DT+RD F+SA EAK+YGL+D +
Sbjct: 149 IEIHAQEILKVKSRMNELMAHHTGKSIEEISRDTERDRFLSANEAKEYGLVDHI 202
>gi|431795130|ref|YP_007222035.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430785356|gb|AGA70639.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 202
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/181 (59%), Positives = 139/181 (76%), Gaps = 3/181 (1%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGPV DD+AN+IVAQLL+L+A DP KDI +Y+NSPGGS++AGM
Sbjct: 17 RSYDIYSRLLKDRIIFLGGPVSDDVANVIVAQLLFLEAEDPEKDIFLYINSPGGSISAGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPL---GGAQGG 227
AI+DT+++IRPDV T+CVGLAASMGAFLL+AG KGKR +LPN+ I+IHQPL GG G
Sbjct: 77 AIYDTMQYIRPDVHTICVGLAASMGAFLLTAGAKGKRTALPNAEILIHQPLIGGGGISGQ 136
Query: 228 QSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
++I++ A +L K +N L+ TGQ E+I DTDRD +M+AEEAK YGLID V+
Sbjct: 137 ATEIEIHAKHLLRIKERMNRILAERTGQAFEQIEADTDRDRYMTAEEAKTYGLIDEVLEK 196
Query: 288 P 288
P
Sbjct: 197 P 197
>gi|296101559|ref|YP_003611705.1| ATP-dependent Clp protease, protease subunit [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295056018|gb|ADF60756.1| ATP-dependent Clp protease, protease subunit [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 207
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 101/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L KA +N ++ HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 152 HAREILKVKARMNELMAQHTGQSLEQIERDTERDRFLSASEAVEYGLVDSIL 203
>gi|387872212|ref|YP_005803593.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
pyrifoliae DSM 12163]
gi|283479306|emb|CAY75222.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
pyrifoliae DSM 12163]
Length = 218
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/208 (51%), Positives = 146/208 (70%), Gaps = 7/208 (3%)
Query: 78 WSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMAN 137
+S +L P +P + G R ++ S+L + RII G VED MAN
Sbjct: 14 YSGERELTAPHMALVPMVVEQTSRGE-------RSYDIYSRLLKERIIFLTGQVEDHMAN 66
Query: 138 IIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAF 197
+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DT++ I+PDVST+C+G A SMGAF
Sbjct: 67 LIVAQMLFLEAENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAF 126
Query: 198 LLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTL 257
LL+AG KGKRY LPNSR+MIHQPLGG QG SDID+ A E++ K +N ++ HTGQT+
Sbjct: 127 LLTAGAKGKRYCLPNSRVMIHQPLGGFQGQASDIDIHAREIIKTKQMMNELMAKHTGQTI 186
Query: 258 EKINEDTDRDFFMSAEEAKDYGLIDGVV 285
E I DT+RD F+SA E+ +YGL+D V+
Sbjct: 187 ETIERDTNRDRFLSASESVEYGLVDSVL 214
>gi|392554152|ref|ZP_10301289.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
undina NCIMB 2128]
Length = 201
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 137/174 (78%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G VED+MAN+I+AQ+L+L++ +P+KDI +Y+NSPGGSVTAGMAI+
Sbjct: 24 DIYSRLLKERIIFLTGQVEDNMANLILAQMLFLESENPDKDIFLYINSPGGSVTAGMAIY 83
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+ I+PDVST+CVG AASMGAFLLS G KGKR+ LPNSR+MIHQPLGG QG SD ++
Sbjct: 84 DTMNFIKPDVSTICVGQAASMGAFLLSGGAKGKRFCLPNSRVMIHQPLGGFQGQASDFEI 143
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
A E+L K LN ++ HTGQ L+ ++ DTDRD FMSA +A DYG++D V N
Sbjct: 144 HAKEILSIKDKLNRLMAEHTGQPLDVVSRDTDRDNFMSASQAVDYGIVDSVFTN 197
>gi|282883083|ref|ZP_06291683.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
lacrimalis 315-B]
gi|300813694|ref|ZP_07094016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 836 str. F0141]
gi|281297060|gb|EFA89556.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
lacrimalis 315-B]
gi|300512236|gb|EFK39414.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 836 str. F0141]
Length = 194
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 140/177 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D MA++IVAQLL+L++ DPNKDI +Y+NSPGGSV+AG+
Sbjct: 16 RSYDIYSRLLKDRIIFASGEVNDTMADLIVAQLLFLESEDPNKDIQLYINSPGGSVSAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G+AASMGA LLS+G KGKR++LPNS IMIHQP GG QG +D
Sbjct: 76 AIYDTMQYIKPDVSTICIGMAASMGAILLSSGAKGKRFALPNSDIMIHQPSGGTQGMATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I + A ++L + +LN L+ +TGQ LEKI D DRDF++ A EAK+YGLID V+ N
Sbjct: 136 IQITAEKILKTRKSLNQILAKNTGQKLEKIERDADRDFWLDANEAKEYGLIDKVIEN 192
>gi|448240808|ref|YP_007404861.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
marcescens WW4]
gi|445211172|gb|AGE16842.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
marcescens WW4]
Length = 207
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAESPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMG+FLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMKFIKPDVSTICMGQACSMGSFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ HTGQ LE+I DT+RD FM+A+EA +YGL+DG++
Sbjct: 149 IEIHAREILKVKARMNELMAEHTGQPLEQIERDTERDRFMTADEAVEYGLVDGIL 203
>gi|157737934|ref|YP_001490618.1| ATP-dependent Clp protease proteolytic subunit [Arcobacter butzleri
RM4018]
gi|315637681|ref|ZP_07892886.1| ATP-dependent Clp protease proteolytic subunit [Arcobacter butzleri
JV22]
gi|384156267|ref|YP_005539082.1| ATP-dependent Clp protease proteolytic subunit [Arcobacter butzleri
ED-1]
gi|167008646|sp|A8EVH5.1|CLPP_ARCB4 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157699788|gb|ABV67948.1| ATP-dependent Clp protease, proteolytic subunit [Arcobacter
butzleri RM4018]
gi|315478028|gb|EFU68756.1| ATP-dependent Clp protease proteolytic subunit [Arcobacter butzleri
JV22]
gi|345469821|dbj|BAK71272.1| ATP-dependent Clp protease proteolytic subunit [Arcobacter butzleri
ED-1]
Length = 194
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/200 (57%), Positives = 144/200 (72%), Gaps = 8/200 (4%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
YIP Y + G G R ++ S+L + RII G + D +A+ +VAQLL+L+A D
Sbjct: 3 YIP-YVVEKTGRGE------RSYDIYSRLLKDRIIMLSGEINDAVASTVVAQLLFLEAED 55
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P+KDI +Y+NSPGG VT+GM+IFDT+ +I+PDV T+C+G AASMGAFLLS+G KGKRYSL
Sbjct: 56 PDKDIYLYINSPGGVVTSGMSIFDTMNYIKPDVCTICIGQAASMGAFLLSSGAKGKRYSL 115
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
PNSRIMIHQPLGGA+G +DI +QA E+ K LNG L+ TGQ I +DTDRD FM
Sbjct: 116 PNSRIMIHQPLGGARGQATDIQIQAKEIQRLKDTLNGILASQTGQDFATIEKDTDRDNFM 175
Query: 271 SAEEAKDYGLIDGVVMNPHK 290
SAEEA YGLID V+ HK
Sbjct: 176 SAEEACSYGLIDEVI-TKHK 194
>gi|269120920|ref|YP_003309097.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sebaldella
termitidis ATCC 33386]
gi|268614798|gb|ACZ09166.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sebaldella
termitidis ATCC 33386]
Length = 190
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/175 (62%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GG VED+MAN I+AQLL+LDA D KDI +Y+NSPGG +T+G+
Sbjct: 15 RSYDIYSRLLKDRIIFLGGEVEDNMANSIIAQLLFLDAQDSEKDITIYINSPGGVITSGL 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+RHI DVSTVCVG AASMGA LL+AGTKGKRYSLPNSRIMIHQPLGGAQG +D
Sbjct: 75 AIYDTMRHINADVSTVCVGQAASMGALLLAAGTKGKRYSLPNSRIMIHQPLGGAQGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
+ +QA EM K +N LS TG+ +++I DT+RD FM+A+EA +YGLID V+
Sbjct: 135 VLIQAREMERIKTLVNEILSEATGKDIKEIYSDTERDNFMNADEALEYGLIDKVI 189
>gi|398938375|ref|ZP_10667778.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM41(2012)]
gi|398165923|gb|EJM54033.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM41(2012)]
Length = 211
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 148/201 (73%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAA 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKR+ LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G TLE+I DT
Sbjct: 126 GKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGHTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE A++YGLID V+
Sbjct: 186 NRDNFMSAEAAREYGLIDEVI 206
>gi|451812100|ref|YP_007448554.1| ATP-dependent Clp protease, protease subunit [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451778002|gb|AGF48950.1| ATP-dependent Clp protease, protease subunit [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 211
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/208 (53%), Positives = 153/208 (73%), Gaps = 7/208 (3%)
Query: 80 IRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANII 139
I + L + + Y+PT EQ G R ++ S+L + RI+ GPV D AN++
Sbjct: 7 ITDYLGISNFNYVPTVI--EQSGRSE-----RAYDIYSRLLKERIVFLSGPVTDYSANLV 59
Query: 140 VAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLL 199
+AQLL+L++ DP+KDI +Y+NSPGGSV AGMAIFDT+ ++PD+ST+CVG+AASMGAFLL
Sbjct: 60 IAQLLFLESDDPSKDIFLYINSPGGSVYAGMAIFDTMNFVKPDISTMCVGIAASMGAFLL 119
Query: 200 SAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEK 259
++GTKGKR+SLPN+ +MIHQP GGAQG SDI + A E+L + LN L+ +TGQ +EK
Sbjct: 120 ASGTKGKRFSLPNACMMIHQPSGGAQGQASDIQIHAEEILRLRNRLNKILAENTGQNMEK 179
Query: 260 INEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I+ DTDRD FMSA +A +YGLID +++N
Sbjct: 180 ISNDTDRDNFMSASDALNYGLIDKILVN 207
>gi|420396617|ref|ZP_14895836.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY1313]
gi|393013475|gb|EJB14651.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY1313]
Length = 195
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 143/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G + D +A+ IVAQLL+L+A DP KDI +Y+NSPGG +T+G+
Sbjct: 16 RSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ IRPDVST+C+G AASMGAFLLS G KGKR+SLP+SRIMIHQPLGGAQG SD
Sbjct: 76 SIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ +NE+L K+ +N L+ ++GQ+LE+I +DTDRDF+MSA+EAK+YGLID V+
Sbjct: 136 IEIISNEILRLKSLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVL 190
>gi|383754373|ref|YP_005433276.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381366425|dbj|BAL83253.1| putative ATP-dependent Clp protease proteolytic subunit
[Selenomonas ruminantium subsp. lactilytica TAM6421]
Length = 203
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 141/180 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GG ++D +AN++VAQ+L+L++ DP+KDI +Y+NSPGG VTAG+
Sbjct: 16 RAYDIYSRLLKDRIIFLGGQIDDSVANVVVAQMLFLESEDPDKDIYLYINSPGGVVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G AASMGA LL+AG KGKR++LPN+R+MIHQPLGGAQG +D
Sbjct: 76 AIYDTMQYIKPDVSTICIGQAASMGAVLLTAGAKGKRFALPNARVMIHQPLGGAQGQSTD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I +QA E+ + +N TG+T E+IN DT+RD FM+A EAK YG++D V+ P K
Sbjct: 136 IQIQAREIQRIRETINDIFVSSTGKTAEEINNDTERDNFMTAAEAKAYGIVDEVITRPKK 195
>gi|359437263|ref|ZP_09227333.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20311]
gi|359446707|ref|ZP_09236358.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20439]
gi|358028087|dbj|GAA63582.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20311]
gi|358039513|dbj|GAA72607.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20439]
Length = 205
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 137/174 (78%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G VED+MAN+I+AQ+L+L++ +P+KDI +Y+NSPGGSVTAGMAI+
Sbjct: 28 DIYSRLLKERIIFLTGQVEDNMANLILAQMLFLESENPDKDIFLYINSPGGSVTAGMAIY 87
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+ I+PDVST+CVG AASMGAFLLS G KGKR+ LPNSR+MIHQPLGG QG SD ++
Sbjct: 88 DTMNFIKPDVSTICVGQAASMGAFLLSGGAKGKRFCLPNSRVMIHQPLGGFQGQASDFEI 147
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
A E+L K LN ++ HTGQ L+ ++ DTDRD FMSA +A DYG++D V N
Sbjct: 148 HAKEILSIKDKLNRLMAEHTGQPLDVVSRDTDRDNFMSASQAVDYGIVDSVFTN 201
>gi|427405940|ref|ZP_18896145.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
F0473]
gi|425708781|gb|EKU71820.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
F0473]
Length = 206
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 141/178 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP++D++AN+++AQ+L+L++ DP+KDI +Y+NSPGG VTAG+
Sbjct: 17 RAYDIYSRLLKERIIFLGGPIDDNVANVVIAQMLFLESEDPDKDIHLYINSPGGVVTAGL 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
A++DT+++I+PDVST+C+G AASM + LL+AG GKRY+LP +RIMIHQP GGAQG +D
Sbjct: 77 AMYDTMQYIKPDVSTICIGQAASMASILLAAGAPGKRYALPQARIMIHQPSGGAQGQSTD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
I +QA E+L + N L+ HTGQ E IN DT+RD FMSAE+AK YGLID VV+ P
Sbjct: 137 IQIQAKEILRLRETANEILAKHTGQKPEAINVDTERDNFMSAEDAKAYGLIDEVVVRP 194
>gi|15611797|ref|NP_223448.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
J99]
gi|308184578|ref|YP_003928711.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
SJM180]
gi|385219046|ref|YP_005780521.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Gambia94/24]
gi|385223847|ref|YP_005783773.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
2017]
gi|385231696|ref|YP_005791615.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
2018]
gi|386746052|ref|YP_006219269.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
HUP-B14]
gi|386755807|ref|YP_006229024.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
PeCan18]
gi|420412371|ref|ZP_14911500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4228]
gi|420417125|ref|ZP_14916230.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4044]
gi|420422141|ref|ZP_14921219.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4110]
gi|420423786|ref|ZP_14922857.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-4]
gi|420425490|ref|ZP_14924550.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-5]
gi|420428804|ref|ZP_14927839.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-17]
gi|420432285|ref|ZP_14931300.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-16]
gi|420434067|ref|ZP_14933072.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-24]
gi|420436085|ref|ZP_14935082.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-27]
gi|420438820|ref|ZP_14937794.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-29]
gi|420440597|ref|ZP_14939552.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-30]
gi|420442369|ref|ZP_14941308.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-36]
gi|420443801|ref|ZP_14942728.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-41]
gi|420445514|ref|ZP_14944425.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-42]
gi|420448944|ref|ZP_14947819.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-44]
gi|420452118|ref|ZP_14950967.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-6]
gi|420453627|ref|ZP_14952463.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-8]
gi|420457142|ref|ZP_14955960.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-16]
gi|420462197|ref|ZP_14960982.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-3]
gi|420463658|ref|ZP_14962434.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-4]
gi|420468970|ref|ZP_14967698.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-10]
gi|420472401|ref|ZP_14971092.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-18]
gi|420474308|ref|ZP_14972984.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-19]
gi|420475769|ref|ZP_14974438.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-21]
gi|420477221|ref|ZP_14975880.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-23]
gi|420479360|ref|ZP_14978009.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-34]
gi|420480832|ref|ZP_14979474.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-1]
gi|420482367|ref|ZP_14981004.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-2]
gi|420484153|ref|ZP_14982779.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-3]
gi|420485833|ref|ZP_14984451.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-4]
gi|420487503|ref|ZP_14986107.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-8]
gi|420489282|ref|ZP_14987877.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-11]
gi|420490982|ref|ZP_14989564.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-13]
gi|420497793|ref|ZP_14996353.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-25]
gi|420499920|ref|ZP_14998472.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-26]
gi|420502671|ref|ZP_15001208.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-41]
gi|420506623|ref|ZP_15005138.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-74]
gi|420507833|ref|ZP_15006342.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-24b]
gi|420509416|ref|ZP_15007918.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-24c]
gi|420511328|ref|ZP_15009815.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-1b]
gi|420512788|ref|ZP_15011271.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-2b]
gi|420514511|ref|ZP_15012982.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-3b]
gi|420516331|ref|ZP_15014794.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-4c]
gi|420518217|ref|ZP_15016669.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-4d]
gi|420519766|ref|ZP_15018206.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-5b]
gi|420521285|ref|ZP_15019716.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-8b]
gi|420523039|ref|ZP_15021460.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-11b]
gi|420524814|ref|ZP_15023221.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-13b]
gi|420528160|ref|ZP_15026552.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-25c]
gi|420530028|ref|ZP_15028413.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-25d]
gi|420533251|ref|ZP_15031612.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M1]
gi|420534829|ref|ZP_15033177.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M2]
gi|420536536|ref|ZP_15034878.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M3]
gi|420538330|ref|ZP_15036657.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M4]
gi|420540066|ref|ZP_15038383.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M5]
gi|420541729|ref|ZP_15040037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M6]
gi|420543247|ref|ZP_15041539.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M9]
gi|421711906|ref|ZP_16151247.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R030b]
gi|6685330|sp|Q9ZL50.1|CLPP_HELPJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|4155294|gb|AAD06311.1| ATP-DEPENDENT PROTEASE, PROTEOLYTIC SUBUNIT [Helicobacter pylori
J99]
gi|308060498|gb|ADO02394.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
SJM180]
gi|317014204|gb|ADU81640.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Gambia94/24]
gi|325996073|gb|ADZ51478.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
2018]
gi|325997669|gb|ADZ49877.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
2017]
gi|384552301|gb|AFI07249.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
HUP-B14]
gi|384562065|gb|AFI02531.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
PeCan18]
gi|393028029|gb|EJB29117.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4228]
gi|393034956|gb|EJB36006.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4044]
gi|393038659|gb|EJB39693.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4110]
gi|393040388|gb|EJB41406.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-5]
gi|393041508|gb|EJB42524.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-4]
gi|393046463|gb|EJB47443.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-17]
gi|393047444|gb|EJB48418.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-16]
gi|393050482|gb|EJB51442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-24]
gi|393050572|gb|EJB51530.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-27]
gi|393055752|gb|EJB56665.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-30]
gi|393056420|gb|EJB57332.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-29]
gi|393058306|gb|EJB59198.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-36]
gi|393060001|gb|EJB60875.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-41]
gi|393062072|gb|EJB62931.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-42]
gi|393064373|gb|EJB65211.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-44]
gi|393068836|gb|EJB69635.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-6]
gi|393069376|gb|EJB70173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-8]
gi|393073968|gb|EJB74733.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-16]
gi|393079061|gb|EJB79795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-3]
gi|393079140|gb|EJB79873.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-4]
gi|393085745|gb|EJB86425.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-10]
gi|393088889|gb|EJB89533.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-18]
gi|393089444|gb|EJB90084.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-19]
gi|393091635|gb|EJB92262.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-21]
gi|393093871|gb|EJB94486.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-23]
gi|393095602|gb|EJB96206.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-34]
gi|393095953|gb|EJB96552.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-1]
gi|393099601|gb|EJC00183.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-2]
gi|393101020|gb|EJC01593.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-3]
gi|393102080|gb|EJC02646.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-8]
gi|393103968|gb|EJC04531.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-4]
gi|393106122|gb|EJC06667.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-11]
gi|393106442|gb|EJC06986.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-13]
gi|393114072|gb|EJC14590.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-25]
gi|393116128|gb|EJC16638.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-74]
gi|393117686|gb|EJC18187.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-24b]
gi|393119812|gb|EJC20302.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-1b]
gi|393120842|gb|EJC21331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-24c]
gi|393122401|gb|EJC22875.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-4d]
gi|393124630|gb|EJC25098.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-4c]
gi|393125645|gb|EJC26098.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-5b]
gi|393127872|gb|EJC28317.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-8b]
gi|393129037|gb|EJC29476.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-11b]
gi|393131085|gb|EJC31509.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-13b]
gi|393134055|gb|EJC34470.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-25c]
gi|393136357|gb|EJC36748.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-25d]
gi|393137712|gb|EJC38095.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M1]
gi|393141469|gb|EJC41834.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M2]
gi|393143044|gb|EJC43389.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M4]
gi|393144184|gb|EJC44528.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M3]
gi|393146283|gb|EJC46612.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M5]
gi|393148349|gb|EJC48673.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M6]
gi|393149154|gb|EJC49466.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-26]
gi|393151893|gb|EJC52195.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-41]
gi|393156657|gb|EJC56920.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-3b]
gi|393157851|gb|EJC58112.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-2b]
gi|393159302|gb|EJC59555.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp M9]
gi|407211398|gb|EKE81266.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R030b]
Length = 195
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/200 (55%), Positives = 149/200 (74%), Gaps = 7/200 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
YIP + + G R ++ S+L + RI+ G + D +A+ IVAQLL+L+A D
Sbjct: 3 YIPYVIENTERGE-------RSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAED 55
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P KDI +Y+NSPGG +T+G++I+DT+ IRPDVST+C+G AASMGAFLLS G KGKR+SL
Sbjct: 56 PEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSL 115
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
P+SRIMIHQPLGGAQG SDI++ +NE+L K +N L+ ++GQ+LE+I +DTDRDF+M
Sbjct: 116 PHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYM 175
Query: 271 SAEEAKDYGLIDGVVMNPHK 290
SA+EAK+YGLID V+ K
Sbjct: 176 SAKEAKEYGLIDKVLQKNVK 195
>gi|347819079|ref|ZP_08872513.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Verminephrobacter aporrectodeae subsp. tuberculatae
At4]
Length = 202
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/192 (54%), Positives = 149/192 (77%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
QG G PM++ GR + ++ S+L + R+I GPV D AN++VAQLL+L++ +P+K
Sbjct: 7 QGLGLIPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDQTANLVVAQLLFLESENPDK 66
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI Y+NSPGGSV++GMAIFDT+ I+PDVST+C G+AASMGAFLL+AG +GKR++LPNS
Sbjct: 67 DISFYINSPGGSVSSGMAIFDTMNFIKPDVSTLCTGMAASMGAFLLAAGAQGKRFALPNS 126
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
++MIHQPLGG QG ++I++ A E+L + LN L+ TGQ LEKI DT+RD+F+SA+
Sbjct: 127 KVMIHQPLGGMQGQATEIEIHAREILKTREQLNKILAERTGQPLEKIQRDTERDYFLSAD 186
Query: 274 EAKDYGLIDGVV 285
E+++YGL+D V+
Sbjct: 187 ESREYGLVDQVI 198
>gi|210621780|ref|ZP_03292809.1| hypothetical protein CLOHIR_00754 [Clostridium hiranonis DSM 13275]
gi|210154544|gb|EEA85550.1| hypothetical protein CLOHIR_00754 [Clostridium hiranonis DSM 13275]
Length = 195
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 139/177 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII V DD A +IVAQLL+L+A DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RSYDIFSRLLKDRIIFLCDEVNDDTAGLIVAQLLFLEAEDPDKDIHLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ +I+PDVST+C+G+AASMGAFLLS+G KGKRY+LPNS IMIHQPLGGAQG ++
Sbjct: 76 AIYDTMNYIKPDVSTICIGMAASMGAFLLSSGAKGKRYALPNSEIMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I+++A ++ K LN LS +TGQ LEKI DT+RD FM A+EA YGLID V+ N
Sbjct: 136 IEIRAKRIIRMKEKLNQILSENTGQPLEKIMADTERDNFMEADEALAYGLIDEVITN 192
>gi|126700924|ref|YP_001089821.1| ATP-dependent Clp protease proteolytic subunit 1 [Clostridium
difficile 630]
gi|254976904|ref|ZP_05273376.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-66c26]
gi|255094290|ref|ZP_05323768.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CIP 107932]
gi|255308377|ref|ZP_05352548.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile ATCC 43255]
gi|255316044|ref|ZP_05357627.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-76w55]
gi|255518701|ref|ZP_05386377.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-97b34]
gi|255651823|ref|ZP_05398725.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-37x79]
gi|255657263|ref|ZP_05402672.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-23m63]
gi|260684849|ref|YP_003216134.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260688507|ref|YP_003219641.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|296451896|ref|ZP_06893613.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296879709|ref|ZP_06903684.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
gi|306521610|ref|ZP_07407957.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-32g58]
gi|384362518|ref|YP_006200370.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile BI1]
gi|423081791|ref|ZP_17070390.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 002-P50-2011]
gi|423085912|ref|ZP_17074347.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 050-P50-2011]
gi|423089385|ref|ZP_17077744.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 70-100-2010]
gi|115252361|emb|CAJ70202.1| ATP-dependent Clp protease proteolytic subunit 1 [Clostridium
difficile 630]
gi|260211012|emb|CBA66324.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260214524|emb|CBE07039.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|296259278|gb|EFH06156.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296429298|gb|EFH15170.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
gi|357548303|gb|EHJ30169.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 050-P50-2011]
gi|357549864|gb|EHJ31702.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 002-P50-2011]
gi|357558182|gb|EHJ39684.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 70-100-2010]
Length = 194
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 137/174 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D A +IVAQLL+L+A DP+KDI +Y+NSPGGS+T+GM
Sbjct: 16 RSYDIFSRLLKDRIIFLGDQVNDATAGLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G+AASMGAFLL+AG KGKR +LPNS IMIHQPLGGAQG +D
Sbjct: 76 AIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRLALPNSEIMIHQPLGGAQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++ A +L K LN LS TGQ LEKI DT+RD FMSA EAK+YGLID V
Sbjct: 136 IEIHAKRILKIKETLNEILSERTGQPLEKIKMDTERDNFMSALEAKEYGLIDEV 189
>gi|425432336|ref|ZP_18812902.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori GAM100Ai]
gi|410715169|gb|EKQ72600.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori GAM100Ai]
Length = 196
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/200 (55%), Positives = 149/200 (74%), Gaps = 7/200 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
YIP + + G R ++ S+L + RI+ G + D +A+ IVAQLL+L+A D
Sbjct: 4 YIPYVIENTERGE-------RSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAED 56
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P KDI +Y+NSPGG +T+G++I+DT+ IRPDVST+C+G AASMGAFLLS G KGKR+SL
Sbjct: 57 PEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSL 116
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
P+SRIMIHQPLGGAQG SDI++ +NE+L K +N L+ ++GQ+LE+I +DTDRDF+M
Sbjct: 117 PHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYM 176
Query: 271 SAEEAKDYGLIDGVVMNPHK 290
SA+EAK+YGLID V+ K
Sbjct: 177 SAKEAKEYGLIDKVLQKNVK 196
>gi|123966075|ref|YP_001011156.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9515]
gi|123200441|gb|ABM72049.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9515]
Length = 196
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/187 (61%), Positives = 140/187 (74%), Gaps = 5/187 (2%)
Query: 99 EQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMY 158
E+ GG R ++ S+L + RII G V D AN IVAQLL+L+A DP KDI MY
Sbjct: 7 EESGGSE-----RVFDIYSRLLRERIIFLGEQVTSDTANRIVAQLLFLEAEDPEKDIYMY 61
Query: 159 LNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIH 218
+NSPGGSV G+ IFDT++H++PD+ TVCVGLAASMGAFLL+AGTKGKR SL +SRIMIH
Sbjct: 62 INSPGGSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIH 121
Query: 219 QPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDY 278
QPLGGA+G SDI +QA+E+L+ K LN LS TG+ LE I EDTDRDF+MS EA +Y
Sbjct: 122 QPLGGARGQASDIRIQADEILYLKERLNSELSERTGKNLETIKEDTDRDFYMSPLEAVEY 181
Query: 279 GLIDGVV 285
GLID V+
Sbjct: 182 GLIDLVL 188
>gi|319891770|ref|YP_004148645.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
pseudintermedius HKU10-03]
gi|317161466|gb|ADV05009.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
pseudintermedius HKU10-03]
Length = 195
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 141/180 (78%), Gaps = 1/180 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ A +L + LN LS TGQ +EKI +DTDRD F++A+EAK+YGLID VM P K
Sbjct: 136 IEIAAKHILRTRERLNKILSELTGQPIEKIEKDTDRDNFLTAQEAKEYGLIDE-VMEPEK 194
>gi|149911805|ref|ZP_01900408.1| ATP-dependent Clp protease proteolytic subunit [Moritella sp. PE36]
gi|149805105|gb|EDM65128.1| ATP-dependent Clp protease proteolytic subunit [Moritella sp. PE36]
Length = 207
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 150/204 (73%), Gaps = 7/204 (3%)
Query: 82 NDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVA 141
N E PS+ +P + G R ++ S+L + R+I G VED MAN++VA
Sbjct: 7 NITESPSNTLVPMVVEQTAKGE-------RSYDIYSRLLKDRVIFLTGQVEDHMANLVVA 59
Query: 142 QLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSA 201
QLL+L++ +P+KDI +Y+NSPGGSV+AGM+I+DT++ I+P+VST+C+G+AASMGAFLL+
Sbjct: 60 QLLFLESENPDKDIFLYINSPGGSVSAGMSIYDTMQFIKPNVSTICMGMAASMGAFLLAG 119
Query: 202 GTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKIN 261
G KGKR++LPN++IMIHQPLGG QG SDI++ ANE++ K LN L+ HTGQ +++
Sbjct: 120 GEKGKRHALPNAKIMIHQPLGGYQGQASDIEIHANEIIKTKRKLNEILAEHTGQEYDRLA 179
Query: 262 EDTDRDFFMSAEEAKDYGLIDGVV 285
DTDRD FM++ EA DYGLID V+
Sbjct: 180 RDTDRDNFMTSAEAMDYGLIDTVI 203
>gi|345298112|ref|YP_004827470.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
asburiae LF7a]
gi|392977875|ref|YP_006476463.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae subsp. dissolvens SDM]
gi|401762532|ref|YP_006577539.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae subsp. cloacae ENHKU01]
gi|345092049|gb|AEN63685.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
asburiae LF7a]
gi|392323808|gb|AFM58761.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae subsp. dissolvens SDM]
gi|400174066|gb|AFP68915.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae subsp. cloacae ENHKU01]
Length = 207
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L KA +N ++ HTGQ+LE+I DT+RD F+SA EA +YGL+D V+
Sbjct: 152 HAREILKVKARMNELMAQHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSVL 203
>gi|257126078|ref|YP_003164192.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptotrichia
buccalis C-1013-b]
gi|257050017|gb|ACV39201.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
buccalis C-1013-b]
Length = 203
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 145/204 (71%), Gaps = 11/204 (5%)
Query: 82 NDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVA 141
N++ V S I +GE R ++ S+L + RII G VED MAN IVA
Sbjct: 11 NNMSVYSPVVIENDGRGE-----------RSYDIYSRLLKDRIIFVSGEVEDGMANAIVA 59
Query: 142 QLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSA 201
QLL+LDA D KDI+MY+NSPGG +TAG+AI+DT+RHI+ DVSTVCVG AASMGA LLSA
Sbjct: 60 QLLFLDAQDNEKDIVMYINSPGGVITAGLAIYDTMRHIKSDVSTVCVGQAASMGAVLLSA 119
Query: 202 GTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKIN 261
G KGKRYSLPNSRIMIHQPLGGA+G +DI +QA E+ K + LS TG+++E+I
Sbjct: 120 GAKGKRYSLPNSRIMIHQPLGGARGQATDIQIQAKEIERMKEITSKILSEATGKSVEEIY 179
Query: 262 EDTDRDFFMSAEEAKDYGLIDGVV 285
DT+RD FMS EEA +YGLID ++
Sbjct: 180 ADTERDNFMSPEEAVNYGLIDKIL 203
>gi|417839806|ref|ZP_12485973.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M19107]
gi|341951681|gb|EGT78241.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
haemolyticus M19107]
Length = 193
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 139/177 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L++ D KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDATKDINIYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PD+ T+C+G A SMGAFLL+ GT GKR +LPN+R+MIHQPLGG +G SD
Sbjct: 76 AIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVMIHQPLGGFRGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I + A E+L K LN L++HTGQ++E+I +DTDRD FMSAEEAK YGL+D V++
Sbjct: 136 IQIHAQEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEAKAYGLVDEVLIK 192
>gi|374369272|ref|ZP_09627306.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus
basilensis OR16]
gi|373099185|gb|EHP40272.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus
basilensis OR16]
Length = 216
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 150/192 (78%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
QG G PM++ GR + ++ S+L + R+I G V D AN++VAQLL+L++ +P+K
Sbjct: 21 QGLGLVPMVVEQSGRGERAYDIYSRLLKERLIFMVGEVNDQTANLVVAQLLFLESENPDK 80
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI +Y+NSPGGSV+AG+AI+DT++ ++PDV+T+C+G+AASMGAFLLSAG KGKR +LPNS
Sbjct: 81 DISLYINSPGGSVSAGLAIYDTMQFVKPDVATLCMGMAASMGAFLLSAGAKGKRSALPNS 140
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
RIMIHQPLGGA+G SDI++QA E+L+ + LN LS TGQ +EKI DTDRD FMS +
Sbjct: 141 RIMIHQPLGGARGQASDIEIQAREILYLRERLNTILSEVTGQPVEKIARDTDRDNFMSGD 200
Query: 274 EAKDYGLIDGVV 285
+A DYGLID V+
Sbjct: 201 QAVDYGLIDKVL 212
>gi|377576799|ref|ZP_09805783.1| ATP-dependent Clp protease proteolytic subunit [Escherichia
hermannii NBRC 105704]
gi|377542831|dbj|GAB50948.1| ATP-dependent Clp protease proteolytic subunit [Escherichia
hermannii NBRC 105704]
Length = 207
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIFSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ HTGQ LE+I DT+RD F+SA++A +YGL+D ++
Sbjct: 149 IEIHAREILKVKARMNELMAQHTGQPLEQIERDTERDRFLSADQAVEYGLVDSIL 203
>gi|254779232|ref|YP_003057337.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
B38]
gi|254001143|emb|CAX29101.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Helicobacter pylori B38]
Length = 196
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 143/180 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G + D +A+ IVAQLL+L+A DP KDI +Y+NSPGG +T+G+
Sbjct: 17 RSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGL 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ IRPDVST+C+G AASMGAFLLS G KGKR+SLP+SRIMIHQPLGGAQG SD
Sbjct: 77 SIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ +NE+L K +N L+ ++GQ+LE+I +DTDRDF+MSA+EAK+YGLID V+ K
Sbjct: 137 IEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNMK 196
>gi|22124934|ref|NP_668357.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
KIM10+]
gi|45440623|ref|NP_992162.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
biovar Microtus str. 91001]
gi|51595309|ref|YP_069500.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
pseudotuberculosis IP 32953]
gi|108808643|ref|YP_652559.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Antiqua]
gi|108811098|ref|YP_646865.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Nepal516]
gi|145600052|ref|YP_001164128.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Pestoides F]
gi|149364997|ref|ZP_01887032.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis CA88-4125]
gi|153950622|ref|YP_001402052.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
pseudotuberculosis IP 31758]
gi|162419837|ref|YP_001607420.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Angola]
gi|165926613|ref|ZP_02222445.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165935884|ref|ZP_02224454.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. IP275]
gi|166010967|ref|ZP_02231865.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166212961|ref|ZP_02238996.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. B42003004]
gi|167398957|ref|ZP_02304481.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167421692|ref|ZP_02313445.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167423463|ref|ZP_02315216.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|170025451|ref|YP_001721956.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
pseudotuberculosis YPIII]
gi|186894326|ref|YP_001871438.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
pseudotuberculosis PB1/+]
gi|218930187|ref|YP_002348062.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
CO92]
gi|229838761|ref|ZP_04458920.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229896085|ref|ZP_04511255.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis Pestoides A]
gi|229899329|ref|ZP_04514472.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis biovar Orientalis str. India
195]
gi|229901327|ref|ZP_04516449.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis Nepal516]
gi|270489513|ref|ZP_06206587.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis KIM D27]
gi|294504888|ref|YP_003568950.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Z176003]
gi|384123358|ref|YP_005505978.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
D106004]
gi|384127209|ref|YP_005509823.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
D182038]
gi|384138999|ref|YP_005521701.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
A1122]
gi|384415839|ref|YP_005625201.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
biovar Medievalis str. Harbin 35]
gi|420548224|ref|ZP_15046052.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-01]
gi|420559163|ref|ZP_15055694.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-03]
gi|420564557|ref|ZP_15060528.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-04]
gi|420575259|ref|ZP_15070229.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-06]
gi|420580575|ref|ZP_15075060.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-07]
gi|420585932|ref|ZP_15079913.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-08]
gi|420596436|ref|ZP_15089361.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-10]
gi|420602100|ref|ZP_15094400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-11]
gi|420607528|ref|ZP_15099304.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-12]
gi|420612918|ref|ZP_15104142.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-13]
gi|420623580|ref|ZP_15113588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-15]
gi|420628671|ref|ZP_15118208.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-16]
gi|420639000|ref|ZP_15127489.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-25]
gi|420644485|ref|ZP_15132489.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-29]
gi|420649756|ref|ZP_15137254.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-32]
gi|420660902|ref|ZP_15147254.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-36]
gi|420671032|ref|ZP_15156419.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-45]
gi|420676406|ref|ZP_15161307.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-46]
gi|420682024|ref|ZP_15166384.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-47]
gi|420698332|ref|ZP_15180768.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-53]
gi|420709536|ref|ZP_15190173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-55]
gi|420714993|ref|ZP_15195025.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-56]
gi|420731546|ref|ZP_15209570.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-60]
gi|420736583|ref|ZP_15214121.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-61]
gi|420742060|ref|ZP_15219042.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-63]
gi|420747778|ref|ZP_15223879.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-64]
gi|420753215|ref|ZP_15228731.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-65]
gi|420764259|ref|ZP_15238003.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-71]
gi|420774473|ref|ZP_15247209.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-76]
gi|420780087|ref|ZP_15252150.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-88]
gi|420785687|ref|ZP_15257045.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-89]
gi|420790833|ref|ZP_15261666.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-90]
gi|420796356|ref|ZP_15266631.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-91]
gi|420801410|ref|ZP_15271175.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-92]
gi|420817653|ref|ZP_15285832.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-95]
gi|420822953|ref|ZP_15290586.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-96]
gi|420833741|ref|ZP_15300311.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-99]
gi|420849438|ref|ZP_15314483.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-102]
gi|420855106|ref|ZP_15319284.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-103]
gi|421764661|ref|ZP_16201449.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
INS]
gi|21759072|sp|Q8ZC65.1|CLPP_YERPE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|60389537|sp|Q66DT4.1|CLPP_YERPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122980282|sp|Q1CL65.1|CLPP_YERPN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|123072666|sp|Q1C4K8.1|CLPP_YERPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214723|sp|A4TPE3.1|CLPP_YERPP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167008652|sp|A7FLC4.1|CLPP_YERP3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|21957773|gb|AAM84608.1|AE013706_3 ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Yersinia pestis KIM10+]
gi|45435480|gb|AAS61039.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis biovar Microtus str. 91001]
gi|51588591|emb|CAH20199.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease,
heat shock protein F21.5 [Yersinia pseudotuberculosis IP
32953]
gi|108774746|gb|ABG17265.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis Nepal516]
gi|108780556|gb|ABG14614.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis Antiqua]
gi|115348798|emb|CAL21752.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis CO92]
gi|145211748|gb|ABP41155.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis Pestoides F]
gi|149291410|gb|EDM41484.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis CA88-4125]
gi|152962117|gb|ABS49578.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pseudotuberculosis IP 31758]
gi|162352652|gb|ABX86600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis Angola]
gi|165916029|gb|EDR34636.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. IP275]
gi|165921541|gb|EDR38738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165989967|gb|EDR42268.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166205748|gb|EDR50228.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. B42003004]
gi|166960611|gb|EDR56632.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167051461|gb|EDR62869.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167057633|gb|EDR67379.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|169751985|gb|ACA69503.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pseudotuberculosis YPIII]
gi|186697352|gb|ACC87981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pseudotuberculosis PB1/+]
gi|229681256|gb|EEO77350.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis Nepal516]
gi|229687731|gb|EEO79804.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis biovar Orientalis str. India
195]
gi|229695127|gb|EEO85174.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229701008|gb|EEO89037.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis Pestoides A]
gi|262362954|gb|ACY59675.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
D106004]
gi|262366873|gb|ACY63430.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
D182038]
gi|270338017|gb|EFA48794.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis KIM D27]
gi|294355347|gb|ADE65688.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Z176003]
gi|320016343|gb|ADV99914.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
biovar Medievalis str. Harbin 35]
gi|342854128|gb|AEL72681.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
A1122]
gi|391423531|gb|EIQ86004.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-01]
gi|391424060|gb|EIQ86482.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-03]
gi|391438456|gb|EIQ99199.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-04]
gi|391443394|gb|EIR03713.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-06]
gi|391455350|gb|EIR14474.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-07]
gi|391456213|gb|EIR15260.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-08]
gi|391471131|gb|EIR28718.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-10]
gi|391472599|gb|EIR30045.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-11]
gi|391473491|gb|EIR30865.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-12]
gi|391487282|gb|EIR43232.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-13]
gi|391488750|gb|EIR44559.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-15]
gi|391503166|gb|EIR57382.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-16]
gi|391508660|gb|EIR62377.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-25]
gi|391519196|gb|EIR71849.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-29]
gi|391521816|gb|EIR74253.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-32]
gi|391533877|gb|EIR85118.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-36]
gi|391539165|gb|EIR89908.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-45]
gi|391552141|gb|EIS01591.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-46]
gi|391552450|gb|EIS01871.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-47]
gi|391568177|gb|EIS15938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-53]
gi|391581440|gb|EIS27324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-55]
gi|391583695|gb|EIS29325.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-56]
gi|391597147|gb|EIS40996.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-60]
gi|391611582|gb|EIS53746.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-61]
gi|391612097|gb|EIS54208.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-63]
gi|391615076|gb|EIS56883.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-64]
gi|391624694|gb|EIS65297.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-65]
gi|391635408|gb|EIS74572.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-71]
gi|391647379|gb|EIS85012.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-76]
gi|391651070|gb|EIS88293.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-88]
gi|391655514|gb|EIS92246.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-89]
gi|391660284|gb|EIS96459.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-90]
gi|391667870|gb|EIT03151.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-91]
gi|391678250|gb|EIT12482.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-92]
gi|391691373|gb|EIT24309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-95]
gi|391694289|gb|EIT26962.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-96]
gi|391708106|gb|EIT39391.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-99]
gi|391724276|gb|EIT53868.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-102]
gi|391725026|gb|EIT54533.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-103]
gi|411174212|gb|EKS44245.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
INS]
Length = 207
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 139/174 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+I AQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++ A E+L K+ +N ++YHTG++LE+I DT+RD F+SAE++ +YGL+D V
Sbjct: 149 IEIHAKEILKVKSRMNELMAYHTGKSLEEIERDTERDRFLSAEQSVEYGLVDSV 202
>gi|70731346|ref|YP_261087.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
protegens Pf-5]
gi|110816462|sp|Q4K9J6.1|CLPP_PSEF5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|68345645|gb|AAY93251.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
protegens Pf-5]
Length = 211
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 149/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAP 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKR+ LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G+TLE+I DT
Sbjct: 126 GKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSAE A++YGLID V+
Sbjct: 186 NRDNFMSAEAAREYGLIDEVI 206
>gi|420553562|ref|ZP_15050818.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-02]
gi|420569607|ref|ZP_15065113.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-05]
gi|420591043|ref|ZP_15084509.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-09]
gi|420618297|ref|ZP_15108830.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-14]
gi|420633805|ref|ZP_15122806.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-19]
gi|420655369|ref|ZP_15142296.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-34]
gi|420666185|ref|ZP_15152006.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-42]
gi|420687358|ref|ZP_15171122.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-48]
gi|420692566|ref|ZP_15175697.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-52]
gi|420704163|ref|ZP_15185410.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-54]
gi|420720505|ref|ZP_15199753.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-58]
gi|420725980|ref|ZP_15204569.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-59]
gi|420758993|ref|ZP_15233387.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-66]
gi|420769492|ref|ZP_15242698.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-72]
gi|420806767|ref|ZP_15276025.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-93]
gi|420812123|ref|ZP_15280835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-94]
gi|420828034|ref|ZP_15295153.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-98]
gi|420838590|ref|ZP_15304689.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-100]
gi|420843781|ref|ZP_15309401.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-101]
gi|420860298|ref|ZP_15323854.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-113]
gi|391423950|gb|EIQ86385.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-02]
gi|391439562|gb|EIR00202.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-05]
gi|391458196|gb|EIR17077.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-09]
gi|391489124|gb|EIR44903.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-14]
gi|391503385|gb|EIR57585.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-19]
gi|391520901|gb|EIR73417.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-34]
gi|391536802|gb|EIR87752.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-42]
gi|391552917|gb|EIS02301.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-48]
gi|391567019|gb|EIS14934.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-52]
gi|391572900|gb|EIS20068.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-54]
gi|391594117|gb|EIS38316.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-58]
gi|391598290|gb|EIS42027.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-59]
gi|391629474|gb|EIS69405.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-66]
gi|391637429|gb|EIS76349.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-72]
gi|391677428|gb|EIT11736.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-93]
gi|391678723|gb|EIT12911.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-94]
gi|391696021|gb|EIT28549.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-98]
gi|391711593|gb|EIT42546.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-100]
gi|391712447|gb|EIT43325.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-101]
gi|391727619|gb|EIT56810.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-113]
Length = 194
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 139/174 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+I AQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 16 RSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 76 SIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++ A E+L K+ +N ++YHTG++LE+I DT+RD F+SAE++ +YGL+D V
Sbjct: 136 IEIHAKEILKVKSRMNELMAYHTGKSLEEIERDTERDRFLSAEQSVEYGLVDSV 189
>gi|419589026|ref|ZP_14124837.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
317/04]
gi|380568626|gb|EIA91090.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
317/04]
Length = 194
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 141/180 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G + D++A IVAQLL+L+A DP KDI +Y+NSPGG +T+G
Sbjct: 15 RSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLYINSPGGVITSGF 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ +I+PDV T+C+G AASMGAFLLS GT+GKR++LPNSRIMIHQPLGGA+G +D
Sbjct: 75 SIYDTMNYIKPDVCTICIGQAASMGAFLLSCGTEGKRFALPNSRIMIHQPLGGARGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L KA LN L+ +T Q + KI +DT+RDFFMSA+EAK+YGLID V+ K
Sbjct: 135 IEIQAKEILRLKAILNDILAKNTKQKVAKIVKDTERDFFMSAQEAKEYGLIDKVLEKSFK 194
>gi|60389557|sp|Q6AK59.2|CLPP_DESPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 203
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 106/181 (58%), Positives = 142/181 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V DD+AN+IVAQLL+L+A DP KDI Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKERIIFLGSGVNDDVANVIVAQLLFLEAEDPEKDITFYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+ D++T+C+G AASMGA LL+AGT GKRY+LPNSRIMIHQPLGG QG +D
Sbjct: 76 AIYDTMQYIKCDIATLCMGQAASMGAVLLAAGTAGKRYALPNSRIMIHQPLGGFQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ E+L + +LN L++HTG+TL+KI DT+RD FMS+ EA+ YGLID V++
Sbjct: 136 IEIHTKEILRIRKDLNNILAHHTGKTLKKIESDTERDNFMSSVEAQKYGLIDEVLVKRED 195
Query: 291 I 291
+
Sbjct: 196 V 196
>gi|406981668|gb|EKE03092.1| hypothetical protein ACD_20C00261G0002 [uncultured bacterium]
Length = 203
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 142/177 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G PV+D +AN+IVAQLL LD+ +P KDI++Y+NSPGGSVTAG+AI+
Sbjct: 19 DIFSRLLRERIIFLGTPVDDMVANLIVAQLLLLDSENPEKDIMLYINSPGGSVTAGLAIY 78
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HIR DV+T+C+G AASMGAFLL+AGT GKR +LP+SR++IHQPLGGAQG +DI++
Sbjct: 79 DTMQHIRADVNTICLGQAASMGAFLLAAGTPGKRMALPHSRVLIHQPLGGAQGQATDIEI 138
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
QA E+ K LN L+ HTGQ+ +KI +DTDRD+ M+ +EA +YG++D V+ K
Sbjct: 139 QAAEIGRIKRTLNELLAKHTGQSFKKIEKDTDRDYIMTPQEALEYGMVDKVITKIEK 195
>gi|311107153|ref|YP_003980006.1| ATP-dependent Clp protease proteolytic subunit ClpP [Achromobacter
xylosoxidans A8]
gi|310761842|gb|ADP17291.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Achromobacter
xylosoxidans A8]
Length = 217
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPV D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV AGM
Sbjct: 37 RAYDIYSRLLRERLIFLVGPVNDATANLVVAQLLFLESENPDKDISLYINSPGGSVYAGM 96
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT++ ++PDVST+C GLAASMGAFLL+AG KGKR++LPNSRIMIHQP GGAQG SD
Sbjct: 97 AIFDTMQFVKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRIMIHQPSGGAQGQASD 156
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I +QA E+L + LN L+ +TGQT+E+I DT+RD FMSAE+A YGL+D V+
Sbjct: 157 IQIQAREILDLRERLNRILAENTGQTMERIGIDTERDNFMSAEDAVSYGLVDKVM 211
>gi|168186116|ref|ZP_02620751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum C str. Eklund]
gi|169296133|gb|EDS78266.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum C str. Eklund]
Length = 195
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 140/180 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D A+++VAQLL+L+A DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RSYDIYSRLLKDRIIFLGEEVNDVSASLVVAQLLFLEAEDPDKDIYLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G+AASMGAFLL+AG KGKR++LPNS IMIHQPLGG QG +D
Sbjct: 76 AIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEIMIHQPLGGFQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I + AN +L K LN LS TG+ LE I +D +RD FM AEEAK+YGLID V+ + K
Sbjct: 136 IGIHANRILKIKDKLNKILSERTGKPLEVIKKDVERDNFMEAEEAKEYGLIDDVITSRKK 195
>gi|381400295|ref|ZP_09925271.1| ATP-dependent Clp protease proteolytic subunit [Kingella kingae
PYKK081]
gi|380834682|gb|EIC14511.1| ATP-dependent Clp protease proteolytic subunit [Kingella kingae
PYKK081]
Length = 205
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/210 (53%), Positives = 155/210 (73%), Gaps = 9/210 (4%)
Query: 84 LEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQL 143
L++ ++ IPT + + G G R ++ S+L + RII GPV D AN++VAQ+
Sbjct: 2 LDIQNNTLIPTVIE-QSGRGE------RAFDIYSRLLKERIIFLVGPVNDQTANLVVAQM 54
Query: 144 LYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGT 203
L+L++ +P+KDI Y+NSPGGSVTAGM+I+DT++ I+PDV T+C+G AASMGAFLLSAGT
Sbjct: 55 LFLESENPDKDIYFYINSPGGSVTAGMSIYDTMKFIKPDVQTLCLGQAASMGAFLLSAGT 114
Query: 204 KGKRYSLPNSRIMIHQPL--GGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKIN 261
KGKR++LPNSR+MIHQPL GG G SDI++ A E+L K LN L+ HTG+TL ++
Sbjct: 115 KGKRFALPNSRVMIHQPLISGGLGGQASDIEIHARELLKLKEKLNQMLAEHTGKTLAEVE 174
Query: 262 EDTDRDFFMSAEEAKDYGLIDGVVMNPHKI 291
DTDRD FMSA+EA +YGLID V+ + +++
Sbjct: 175 RDTDRDNFMSAQEAIEYGLIDKVITSRNEV 204
>gi|416893125|ref|ZP_11924411.1| ATP-dependent Clp protease proteolytic subunit [Aggregatibacter
aphrophilus ATCC 33389]
gi|347814153|gb|EGY30803.1| ATP-dependent Clp protease proteolytic subunit [Aggregatibacter
aphrophilus ATCC 33389]
Length = 188
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/174 (61%), Positives = 140/174 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED+MAN+IVAQLL+L++ DP+KDI +Y+NSPGGSVTAGM
Sbjct: 11 RAYDIYSRLLKDRVIFLSGEVEDNMANLIVAQLLFLESEDPDKDINLYINSPGGSVTAGM 70
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDV T+CVG A SMGAFLL+ GT GKR +LP++R+MIHQPLGG +G SD
Sbjct: 71 AIYDTMQFIKPDVRTLCVGQACSMGAFLLAGGTPGKRGALPHARVMIHQPLGGFRGQASD 130
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I + A E+L K+ LN L++HTGQ +E I +DTDRD FMSAEEAK+YGL+D V
Sbjct: 131 IQIHAQEILKIKSTLNERLAFHTGQPIETIEKDTDRDNFMSAEEAKNYGLVDEV 184
>gi|239815493|ref|YP_002944403.1| ATP-dependent Clp protease proteolytic subunit [Variovorax
paradoxus S110]
gi|259491242|sp|C5CJT4.1|CLPP_VARPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|239802070|gb|ACS19137.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Variovorax
paradoxus S110]
Length = 202
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/196 (55%), Positives = 151/196 (77%), Gaps = 6/196 (3%)
Query: 96 AQGEQGGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAV 149
AQ +G G PM++ GR + ++ S+L + RII G V D AN++VAQLL+L++
Sbjct: 3 AQEIKGLGMIPMVIEQSGRGERSYDIYSRLLKERIIFLVGEVNDQTANLVVAQLLFLESE 62
Query: 150 DPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS 209
+P+KDI Y+NSPGGSV+AGMAI+DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+S
Sbjct: 63 NPDKDISFYINSPGGSVSAGMAIYDTMQFIKPDVSTMCIGFAASMGAFLLAAGEKGKRFS 122
Query: 210 LPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFF 269
LPNS+IMIHQ LGGA+G +DI++ A ++L K +N L+ TGQ LEK+ DT+RD+F
Sbjct: 123 LPNSKIMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPLEKVKSDTERDYF 182
Query: 270 MSAEEAKDYGLIDGVV 285
++A+EAKDYGL+D V+
Sbjct: 183 LTADEAKDYGLVDQVI 198
>gi|237653230|ref|YP_002889544.1| ATP-dependent Clp protease proteolytic subunit [Thauera sp. MZ1T]
gi|237624477|gb|ACR01167.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thauera sp.
MZ1T]
Length = 212
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R++ GPV D AN+IVAQLL+L++ +P+KDI Y+NSPGGSVTAGM
Sbjct: 32 RAYDIYSRLLKERVVFLVGPVNDVTANLIVAQLLFLESENPDKDIYFYINSPGGSVTAGM 91
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+P+VST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 92 AIYDTMQFIKPNVSTLCIGQAASMGAFLLAAGEKGKRFILPNSRVMIHQPLGGFQGQASD 151
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L+ ++ LN LS HTGQ LE+I +DTDRD FMSA A +YGL+D V+
Sbjct: 152 IEIHAREILYLRSRLNDMLSKHTGQALERIEKDTDRDNFMSATAAVEYGLVDKVL 206
>gi|21241838|ref|NP_641420.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
axonopodis pv. citri str. 306]
gi|58580656|ref|YP_199672.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas oryzae
pv. oryzae KACC 10331]
gi|78046637|ref|YP_362812.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|84622589|ref|YP_449961.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|188578371|ref|YP_001915300.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas oryzae
pv. oryzae PXO99A]
gi|188992776|ref|YP_001904786.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. campestris str. B100]
gi|289664185|ref|ZP_06485766.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. vasculorum NCPPB 702]
gi|289668776|ref|ZP_06489851.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. musacearum NCPPB 4381]
gi|294666562|ref|ZP_06731803.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|325914926|ref|ZP_08177258.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas
vesicatoria ATCC 35937]
gi|325927441|ref|ZP_08188688.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas
perforans 91-118]
gi|346723958|ref|YP_004850627.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
axonopodis pv. citrumelo F1]
gi|384418134|ref|YP_005627494.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xanthomonas
oryzae pv. oryzicola BLS256]
gi|418517007|ref|ZP_13083175.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
axonopodis pv. malvacearum str. GSPB1386]
gi|418520577|ref|ZP_13086625.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
axonopodis pv. malvacearum str. GSPB2388]
gi|25008307|sp|Q8PNI5.1|CLPP_XANAC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460159|sp|Q5H434.1|CLPP_XANOR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90183187|sp|Q3BWQ1.1|CLPP_XANC5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|110816521|sp|Q2P6Z0.1|CLPP_XANOM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706557|sp|B0RTF7.1|CLPP_XANCB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706558|sp|B2SMI3.1|CLPP_XANOP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|21107218|gb|AAM35956.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
axonopodis pv. citri str. 306]
gi|58425250|gb|AAW74287.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas oryzae
pv. oryzae KACC 10331]
gi|78035067|emb|CAJ22712.1| ATP-dependent Clp protease [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|84366529|dbj|BAE67687.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|167734536|emb|CAP52746.1| ATP-dependent Clp protease [Xanthomonas campestris pv. campestris]
gi|188522823|gb|ACD60768.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xanthomonas
oryzae pv. oryzae PXO99A]
gi|292603706|gb|EFF47116.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|325538819|gb|EGD10483.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas
vesicatoria ATCC 35937]
gi|325542191|gb|EGD13686.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas
perforans 91-118]
gi|346648705|gb|AEO41329.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
axonopodis pv. citrumelo F1]
gi|353461048|gb|AEQ95327.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xanthomonas
oryzae pv. oryzicola BLS256]
gi|410703462|gb|EKQ61953.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
axonopodis pv. malvacearum str. GSPB2388]
gi|410706220|gb|EKQ64682.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
axonopodis pv. malvacearum str. GSPB1386]
Length = 208
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/185 (57%), Positives = 144/185 (77%), Gaps = 1/185 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GP++D MAN+IVAQLL+L+A +P KDI +Y+NSPGG VTAGM
Sbjct: 23 RAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGM 82
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG AASMGA LL++G GKRY+LPNSR+MIHQPLGG QG +D
Sbjct: 83 AIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATD 142
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV-MNPH 289
ID+ A E+L ++ LN L+ HTGQ+LE I DT+RD F SA +A+ YGL+D V+ P
Sbjct: 143 IDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFKSAVDAQAYGLVDQVLERRPE 202
Query: 290 KILQP 294
+ +QP
Sbjct: 203 ESIQP 207
>gi|112823618|gb|ABI25707.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
somnus 129PT]
Length = 188
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 140/177 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L+A DP KDI +Y+NSPGGSVTAGM
Sbjct: 11 RSYDIYSRLLKERVIFLTGEVEDRMANLIVAQLLFLEAEDPAKDINIYINSPGGSVTAGM 70
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDV T+C+G A SMGAFLL+ GT GKR +LP++R+MIHQPLGG +G SD
Sbjct: 71 AIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGTAGKRAALPHARVMIHQPLGGFRGQASD 130
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I + A E+L K LN L++HTGQ++E+I +DTDRD FMSAE+AK YGL+D V++
Sbjct: 131 IQIHAQEILKIKQTLNERLAFHTGQSIEQIEQDTDRDNFMSAEQAKLYGLVDEVLIK 187
>gi|456014672|gb|EMF48274.1| ATP-dependent Clp protease proteolytic subunit [Planococcus
halocryophilus Or1]
Length = 233
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G ++D++AN IVAQLL+L+A DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRVIMLGSAIDDNVANSIVAQLLFLEAEDPDKDISIYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ IRPDV T+C+G+AASMGAFLL+AGTKGKR +LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTMQFIRPDVQTICIGMAASMGAFLLAAGTKGKRLALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +LH + LN LS TGQ ++ I +DTDRD FM+AE A +YGLID V+
Sbjct: 136 IEIAAKRILHLREKLNQILSERTGQPIDVIAKDTDRDNFMTAERALEYGLIDQVI 190
>gi|315127189|ref|YP_004069192.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
sp. SM9913]
gi|315015703|gb|ADT69041.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
sp. SM9913]
Length = 205
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 136/174 (78%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G VED+MAN+I+AQ+L+L++ +P KDI +Y+NSPGGSVTAGMAI+
Sbjct: 28 DIYSRLLKERIIFLTGQVEDNMANLILAQMLFLESENPEKDIFLYINSPGGSVTAGMAIY 87
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+ I+PDVST+CVG AASMGAFLLS G KGKR+ LPNSR+MIHQPLGG QG SD ++
Sbjct: 88 DTMNFIKPDVSTICVGQAASMGAFLLSGGAKGKRFCLPNSRVMIHQPLGGFQGQASDFEI 147
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
A E+L K LN ++ HTGQ L+ ++ DTDRD FMSA +A DYG++D V N
Sbjct: 148 HAKEILSIKDKLNRLMAEHTGQPLDVVSRDTDRDNFMSASQAVDYGIVDSVFTN 201
>gi|410997188|gb|AFV98653.1| ATP-dependent Clp protease proteolytic subunit [uncultured
Sulfuricurvum sp. RIFRC-1]
Length = 198
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/200 (55%), Positives = 148/200 (74%), Gaps = 7/200 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
YIP Y + G G R ++ S+L + RII G V D +A+ IVAQ+L+L+A D
Sbjct: 3 YIP-YVIEKTGRGE------RSYDIYSRLLKDRIIMLSGEVNDPVASSIVAQMLFLEAED 55
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P KDI Y+NSPGG +T+GMAI+DT+ +IRPDVST+C+G AASMGAFLLS+G KGKRY+L
Sbjct: 56 PQKDIYFYINSPGGVITSGMAIYDTMNYIRPDVSTICIGQAASMGAFLLSSGAKGKRYAL 115
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
P++RIMIHQPLGGAQG +DI++QA E+L KA LN L+ + GQ+++K+ +DTDRD FM
Sbjct: 116 PHARIMIHQPLGGAQGQATDIEIQAKEILRMKAELNEILAKNCGQSIKKLEKDTDRDNFM 175
Query: 271 SAEEAKDYGLIDGVVMNPHK 290
SA E +YG+ID V++ K
Sbjct: 176 SAAEGVEYGIIDEVLIQKEK 195
>gi|385787570|ref|YP_005818679.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia sp.
Ejp617]
gi|310766842|gb|ADP11792.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia sp.
Ejp617]
Length = 215
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/208 (51%), Positives = 146/208 (70%), Gaps = 7/208 (3%)
Query: 78 WSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMAN 137
+S +L P +P + G R ++ S+L + RII G VED MAN
Sbjct: 11 YSGERELTAPHMALVPMVVEQTSRGE-------RSYDIYSRLLKERIIFLTGQVEDHMAN 63
Query: 138 IIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAF 197
+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DT++ I+PDVST+C+G A SMGAF
Sbjct: 64 LIVAQMLFLEAENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAF 123
Query: 198 LLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTL 257
LL+AG KGKRY LPNSR+MIHQPLGG QG SDID+ A E++ K +N ++ HTGQT+
Sbjct: 124 LLTAGAKGKRYCLPNSRVMIHQPLGGFQGQASDIDIHAREIIKTKQMMNELMAKHTGQTI 183
Query: 258 EKINEDTDRDFFMSAEEAKDYGLIDGVV 285
E I DT+RD F+SA E+ +YGL+D V+
Sbjct: 184 ETIERDTNRDRFLSASESVEYGLVDSVL 211
>gi|116070498|ref|ZP_01467767.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
gi|116065903|gb|EAU71660.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
Length = 197
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/186 (62%), Positives = 138/186 (74%), Gaps = 5/186 (2%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V D AN IVAQ+L+L+A DP KDI +Y+NSPGGSV G+ IF
Sbjct: 17 DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGSVYDGLGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HI+PDV TVCVGLAASMGAFLL AGTKGKR SL +SRIMIHQPLGGA G SDI +
Sbjct: 77 DTMQHIKPDVQTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQPLGGASGQASDIRI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQ 293
QA+E+L+ K LN LS TGQ L++I EDTDRDFFMS EA YGLID V+ +
Sbjct: 137 QADEILYLKDRLNTELSDRTGQPLDRIQEDTDRDFFMSPSEAVSYGLIDSVIDK-----R 191
Query: 294 PVAAAA 299
PV A A
Sbjct: 192 PVQAVA 197
>gi|330829918|ref|YP_004392870.1| ATP-dependent Clp protease proteolytic subunit [Aeromonas veronii
B565]
gi|406676844|ref|ZP_11084029.1| ATP-dependent Clp protease proteolytic subunit [Aeromonas veronii
AMC35]
gi|423201789|ref|ZP_17188368.1| ATP-dependent Clp protease proteolytic subunit [Aeromonas veronii
AER39]
gi|423206426|ref|ZP_17192982.1| ATP-dependent Clp protease proteolytic subunit [Aeromonas veronii
AMC34]
gi|423209382|ref|ZP_17195936.1| ATP-dependent Clp protease proteolytic subunit [Aeromonas veronii
AER397]
gi|328805054|gb|AEB50253.1| ATP-dependent Clp protease proteolytic subunit [Aeromonas veronii
B565]
gi|404615736|gb|EKB12695.1| ATP-dependent Clp protease proteolytic subunit [Aeromonas veronii
AER39]
gi|404617240|gb|EKB14176.1| ATP-dependent Clp protease proteolytic subunit [Aeromonas veronii
AER397]
gi|404621978|gb|EKB18843.1| ATP-dependent Clp protease proteolytic subunit [Aeromonas veronii
AMC34]
gi|404625158|gb|EKB21975.1| ATP-dependent Clp protease proteolytic subunit [Aeromonas veronii
AMC35]
Length = 207
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 150/210 (71%), Gaps = 8/210 (3%)
Query: 77 IWSIRNDL-EVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDM 135
++ ND+ + PS+ +P + G R ++ S+L + R+I G VED M
Sbjct: 1 MYKNYNDMTDSPSNALVPIVVEQTAKGE-------RSYDIYSRLLKERVIFLTGQVEDHM 53
Query: 136 ANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMG 195
AN++VAQLL+L++ +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVSTVC+G A SMG
Sbjct: 54 ANLVVAQLLFLESENPDKDIYIYINSPGGSVTAGMSIYDTMQFIKPDVSTVCMGQACSMG 113
Query: 196 AFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQ 255
AFLL+ G KGKR+ LPN+R+MIHQPLGG QG SDI + A E+L K LN L++HTGQ
Sbjct: 114 AFLLAGGAKGKRFCLPNARVMIHQPLGGFQGQASDIQIHAQEILKIKNTLNERLAFHTGQ 173
Query: 256 TLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
+ I DTDRD FMSAE+A YGL+DGV+
Sbjct: 174 DMATIERDTDRDNFMSAEQAVAYGLVDGVL 203
>gi|424780212|ref|ZP_18207092.1| ATP-dependent Clp protease proteolytic subunit [Catellicoccus
marimammalium M35/04/3]
gi|422843170|gb|EKU27611.1| ATP-dependent Clp protease proteolytic subunit [Catellicoccus
marimammalium M35/04/3]
Length = 197
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/181 (56%), Positives = 141/181 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V DDMAN I+AQLL+LDA DP KDI +Y+NSPGGSV+AG+
Sbjct: 16 RSYDIYSRLLKDRIVMLSGEVNDDMANSIIAQLLFLDAQDPEKDIYLYINSPGGSVSAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT+ ++ DV T+ +G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIFDTMNFVKADVQTIVLGMAASMGSFLLTAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
ID+ A +L + LN L+ TGQ LEKIN DT+RD +M+A+EAK+YGL+D V+ + ++
Sbjct: 136 IDIAARHILQTRERLNKILAERTGQPLEKINRDTERDNYMTAQEAKEYGLVDEVLTSSNE 195
Query: 291 I 291
I
Sbjct: 196 I 196
>gi|323140768|ref|ZP_08075687.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Phascolarctobacterium succinatutens YIT 12067]
gi|322414786|gb|EFY05586.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Phascolarctobacterium succinatutens YIT 12067]
Length = 197
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 145/175 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ GP++D+MAN+++AQLL+L++ DP+KDI +Y+NSPGGSV+AGM
Sbjct: 16 RSYDIYSRLLKDRIVFVTGPIDDNMANVVIAQLLFLESEDPDKDIHLYINSPGGSVSAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G+AASM + LL+AG GKR++LP SR+MIHQPLGGAQG ++
Sbjct: 76 AIYDTMQYIKPDVSTICMGMAASMASVLLAAGAPGKRFALPYSRVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L + +N L+ HTGQT+EKI DT+RD +++++EAK+YGLID VV
Sbjct: 136 IEIHAREILRIREEMNQVLAKHTGQTVEKIAADTERDHYLTSKEAKEYGLIDEVV 190
>gi|303229413|ref|ZP_07316203.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-134-V-Col7a]
gi|303231336|ref|ZP_07318070.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-049-V-Sch6]
gi|401680587|ref|ZP_10812502.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. ACP1]
gi|429760069|ref|ZP_19292559.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella atypica KON]
gi|302513932|gb|EFL55940.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-049-V-Sch6]
gi|302515949|gb|EFL57901.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-134-V-Col7a]
gi|400218495|gb|EJO49375.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. ACP1]
gi|429178474|gb|EKY19752.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella atypica KON]
Length = 197
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/196 (54%), Positives = 150/196 (76%), Gaps = 9/196 (4%)
Query: 91 YIPTYA-QGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAV 149
Y+P QGE+G R ++ S+L + RII GGP++D++AN ++AQ+L+L+A
Sbjct: 2 YVPIVVEQGERGE--------RSYDIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAE 53
Query: 150 DPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS 209
DP+KDI +Y+NSPGG VTAGMAI+DT+++I+PDVST+CVG AASMGA LL+AG KGKR++
Sbjct: 54 DPDKDIHLYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGAKGKRFA 113
Query: 210 LPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFF 269
LP++R+MIHQPLGG QG S+I++ A E+L + LNG L+ +GQ +E + DTDRD F
Sbjct: 114 LPHARVMIHQPLGGVQGQASEIEIHAREILRMREELNGILAARSGQDIEVVARDTDRDNF 173
Query: 270 MSAEEAKDYGLIDGVV 285
MSA++A +YGLID V+
Sbjct: 174 MSAQDAVEYGLIDEVL 189
>gi|419538375|ref|ZP_14077733.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
90-3]
gi|419539983|ref|ZP_14079226.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
Z163]
gi|419545413|ref|ZP_14084317.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2553]
gi|419548526|ref|ZP_14087147.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2685]
gi|419553494|ref|ZP_14091731.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2692]
gi|419555151|ref|ZP_14093255.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2698]
gi|419556647|ref|ZP_14094627.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
84-2]
gi|419560556|ref|ZP_14098196.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
86119]
gi|419562618|ref|ZP_14100124.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1091]
gi|419566976|ref|ZP_14104219.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1148]
gi|419573882|ref|ZP_14110666.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1891]
gi|419585477|ref|ZP_14121530.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
202/04]
gi|419587901|ref|ZP_14123770.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
67-8]
gi|419593793|ref|ZP_14128997.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 9854]
gi|419595883|ref|ZP_14130968.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 23336]
gi|419600679|ref|ZP_14135429.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 23344]
gi|419603459|ref|ZP_14138009.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
151-9]
gi|419604516|ref|ZP_14138980.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 9853]
gi|419614505|ref|ZP_14148286.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
H56]
gi|419616077|ref|ZP_14149730.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
Z156]
gi|380518026|gb|EIA44128.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
Z163]
gi|380518081|gb|EIA44182.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
90-3]
gi|380522334|gb|EIA48022.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2553]
gi|380527365|gb|EIA52755.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2685]
gi|380528656|gb|EIA53899.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2692]
gi|380530561|gb|EIA55629.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2698]
gi|380534497|gb|EIA59281.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
84-2]
gi|380536913|gb|EIA61503.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
86119]
gi|380540547|gb|EIA64849.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1091]
gi|380544994|gb|EIA68992.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1148]
gi|380550548|gb|EIA74196.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1891]
gi|380561525|gb|EIA84451.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
67-8]
gi|380562019|gb|EIA84912.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
202/04]
gi|380568895|gb|EIA91353.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 9854]
gi|380572687|gb|EIA94888.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 23336]
gi|380578721|gb|EIB00549.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
151-9]
gi|380579883|gb|EIB01660.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 9853]
gi|380582709|gb|EIB04328.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 23344]
gi|380592651|gb|EIB13521.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
H56]
gi|380596177|gb|EIB16879.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
Z156]
Length = 194
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 141/180 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G + D++A IVAQLL+L+A DP KDI +Y+NSPGG +T+G
Sbjct: 15 RSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPQKDIYLYINSPGGVITSGF 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ +I+PDV T+C+G AASMGAFLLS GT+GKR++LPNSRIMIHQPLGGA+G +D
Sbjct: 75 SIYDTMNYIKPDVCTICIGQAASMGAFLLSCGTEGKRFALPNSRIMIHQPLGGARGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L KA LN L+ +T Q + KI +DT+RDFFMSA+EAK+YGLID V+ K
Sbjct: 135 IEIQAKEILRLKAILNDILAKNTKQKVAKIVKDTERDFFMSAQEAKEYGLIDKVLEKSFK 194
>gi|409990518|ref|ZP_11273881.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis str. Paraca]
gi|291569210|dbj|BAI91482.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
gi|409938615|gb|EKN79916.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis str. Paraca]
Length = 198
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/203 (56%), Positives = 149/203 (73%), Gaps = 17/203 (8%)
Query: 86 VPSSPY-IP--TYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQ 142
VPS PY +P TY Q + + +LF+ RII V+D +AN IVA
Sbjct: 5 VPSVPYRLPGSTYEQ--------------WIGIYERLFRERIIFLSEEVDDGIANAIVAY 50
Query: 143 LLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAG 202
+LYLD+ DP+K I +Y+NSPGGSVTAGMAI+DT+++I+ DV T+CVG+AASMGAFLL+AG
Sbjct: 51 MLYLDSEDPSKPIYLYINSPGGSVTAGMAIYDTMQYIKSDVVTICVGMAASMGAFLLAAG 110
Query: 203 TKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINE 262
TKGKR +LPN+RIMIHQPLGG +G +DI+++A E+L + LN L+ +GQTLEKI +
Sbjct: 111 TKGKRLALPNARIMIHQPLGGTRGQATDIEIEAKEILRIRKVLNEMLAERSGQTLEKIEK 170
Query: 263 DTDRDFFMSAEEAKDYGLIDGVV 285
DTDRD+FMSA EA +YGLID V+
Sbjct: 171 DTDRDYFMSAAEAHEYGLIDQVI 193
>gi|352096782|ref|ZP_08957538.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
gi|351676004|gb|EHA59162.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
Length = 229
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/218 (53%), Positives = 153/218 (70%), Gaps = 8/218 (3%)
Query: 70 CESTWKGIWSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGG 129
E+ W+G + + +SP +PT + + G G R ++ S+L + RII G
Sbjct: 10 IENRWRGTLPVSAHTPL-ASPGVPTVVE-QSGRGE------RSFDIYSRLLRERIIFLGT 61
Query: 130 PVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVG 189
V D +A+ +VAQLL+L+A DP KDI +Y+NSPGGS+TAG+AI+DT++ + PDV T+C G
Sbjct: 62 DVNDQVADALVAQLLFLEAEDPEKDIQVYINSPGGSITAGLAIYDTMQQVAPDVVTICYG 121
Query: 190 LAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYL 249
LAASMGAFLLS G KGKR +LPN+RIMIHQPLGGAQG DI++ A E+L K LNG +
Sbjct: 122 LAASMGAFLLSGGCKGKRLALPNARIMIHQPLGGAQGQAVDIEIMAQEILFLKETLNGLM 181
Query: 250 SYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
+ HTGQ L KI EDT+RD+F+S EA +YGLID VV N
Sbjct: 182 ADHTGQPLAKITEDTERDYFLSPAEAVEYGLIDRVVDN 219
>gi|161486690|ref|YP_719644.2| ATP-dependent Clp protease proteolytic subunit [Haemophilus somnus
129PT]
Length = 193
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 140/177 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L+A DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKERVIFLTGEVEDRMANLIVAQLLFLEAEDPAKDINIYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDV T+C+G A SMGAFLL+ GT GKR +LP++R+MIHQPLGG +G SD
Sbjct: 76 AIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGTAGKRAALPHARVMIHQPLGGFRGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I + A E+L K LN L++HTGQ++E+I +DTDRD FMSAE+AK YGL+D V++
Sbjct: 136 IQIHAQEILKIKQTLNERLAFHTGQSIEQIEQDTDRDNFMSAEQAKLYGLVDEVLIK 192
>gi|384915524|ref|ZP_10015740.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
(Caseinolytic protease) (Protease Ti) (Heat shock
protein F21.5) [Methylacidiphilum fumariolicum SolV]
gi|384527074|emb|CCG91611.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
(Caseinolytic protease) (Protease Ti) (Heat shock
protein F21.5) [Methylacidiphilum fumariolicum SolV]
Length = 216
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G P++D++AN+++AQLL+L DP KDI +Y++SPGG VTAGM
Sbjct: 22 RGYDIFSRLLKDRIVFIGTPIDDNIANLVIAQLLFLQMEDPKKDISLYIHSPGGYVTAGM 81
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ + DV+T C+G AASM A LL+AGTKGKR++LPN+RIMIHQPLGGAQG SD
Sbjct: 82 AIYDTMQFLSCDVNTYCIGQAASMAAVLLAAGTKGKRFALPNARIMIHQPLGGAQGQASD 141
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I +QA E+L K LN LSYHT Q +E++ +DTDRDFFMSAE+AK YGLID VV
Sbjct: 142 ISIQAQEILRTKRLLNEILSYHTKQPIERLEKDTDRDFFMSAEDAKAYGLIDEVV 196
>gi|413962707|ref|ZP_11401934.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp.
SJ98]
gi|413928539|gb|EKS67827.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp.
SJ98]
Length = 217
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 143/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R++ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 39 RAYDIYSRLLKERVVFLVGEVNDQSANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 98
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ ++PDVST+C+GLAASMGAFLL+AG KGKR +LPN+R+MIHQPLGGA+G SD
Sbjct: 99 AIYDTMQFVKPDVSTLCMGLAASMGAFLLAAGAKGKRVALPNARVMIHQPLGGARGQASD 158
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN LS+HTGQ +E+I DTDRD FMS ++A+ YGL+D V+
Sbjct: 159 IEIQAREILYLKERLNQLLSHHTGQPVERIARDTDRDNFMSGDDAQAYGLVDQVL 213
>gi|187935559|ref|YP_001887076.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum B str. Eklund 17B]
gi|226706444|sp|B2TPB9.1|CLPP_CLOBB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|187723712|gb|ACD24933.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum B str. Eklund 17B]
Length = 199
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V DD +N+IV+QLL+L++ DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RSYDIFSRLLKERIIMLSGEVNDDSSNLIVSQLLFLESEDPDKDISIYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG+AASMGAFLLS+G GKRY+LPN+ IMIHQPLGG QG +D
Sbjct: 76 AIYDTMQYIKPDVSTICVGMAASMGAFLLSSGANGKRYALPNAEIMIHQPLGGFQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + AN +L K +LN LS +T Q LE I D +RD FM+A+EAK YGL+D V+
Sbjct: 136 IQIHANRILKIKESLNKILSENTNQPLEVIEADVERDNFMTADEAKTYGLVDKVI 190
>gi|15616126|ref|NP_244431.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
gi|11386690|sp|Q9K709.1|CLPP1_BACHD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|10176188|dbj|BAB07283.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
Length = 194
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IVAQLL+L A DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIMLGTAIDDNVANSIVAQLLFLQAEDPDKDISLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+P+VST+C+G+AASMGAFLL+AG KGKR++LPNS +MIHQPLGG +G SD
Sbjct: 76 AIYDTMQYIKPNVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGTRGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ +L + LN L+ TGQ LE+I +DTDRD FM+AE+A++YGLID V+
Sbjct: 136 IEIHTRRILEMRETLNRILAERTGQPLEQIAKDTDRDNFMTAEKAREYGLIDKVI 190
>gi|294141768|ref|YP_003557746.1| ATP-dependent Clp protease, proteolytic subunit [Shewanella
violacea DSS12]
gi|293328237|dbj|BAJ02968.1| ATP-dependent Clp protease, proteolytic subunit [Shewanella
violacea DSS12]
Length = 203
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 136/175 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GPVE+ MAN++VAQLL+L++ P+KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKERIIFLVGPVEEHMANLVVAQLLFLESESPDKDIFLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVSTVC+G AASMGAFLL+ G GKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 85 AIYDTMQFIKPDVSTVCIGQAASMGAFLLAGGAAGKRHCLPNSRVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ HTGQ LE I DTDRD FMSA +A +YGL+D V+
Sbjct: 145 IAIHAQEILGIKNKLNEMLAEHTGQPLEVIERDTDRDNFMSAAQAAEYGLVDSVM 199
>gi|89896100|ref|YP_519587.1| hypothetical protein DSY3354 [Desulfitobacterium hafniense Y51]
gi|219670517|ref|YP_002460952.1| ATP-dependent Clp protease proteolytic subunit [Desulfitobacterium
hafniense DCB-2]
gi|116243113|sp|Q24S49.1|CLPP2_DESHY RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|89335548|dbj|BAE85143.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219540777|gb|ACL22516.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfitobacterium hafniense DCB-2]
Length = 202
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/183 (57%), Positives = 143/183 (78%), Gaps = 3/183 (1%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGPV DD+AN++VAQ+L+L+A DP KDI +Y+NSPGGS++AGM
Sbjct: 17 RSYDIYSRLLKDRIIFLGGPVTDDVANLVVAQMLFLEAEDPEKDIFLYINSPGGSISAGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPL---GGAQGG 227
AI+DT+++IR DV T+CVGLAASMGAFLL+AG KGKR +LPN+ I+IHQPL GG G
Sbjct: 77 AIYDTMQYIRADVHTICVGLAASMGAFLLTAGAKGKRQALPNAEILIHQPLIGGGGISGQ 136
Query: 228 QSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
++I++ A +L K +N L+ TGQT+E+I DTDRD +M+AEEAK+YGLID V+
Sbjct: 137 ATEIEIHAKHLLRVKERMNRILAERTGQTIERIEADTDRDRYMTAEEAKEYGLIDEVLEK 196
Query: 288 PHK 290
P++
Sbjct: 197 PNQ 199
>gi|260435297|ref|ZP_05789267.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 8109]
gi|260413171|gb|EEX06467.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 8109]
Length = 205
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/186 (62%), Positives = 139/186 (74%), Gaps = 5/186 (2%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V D AN IVAQ+L+L+A DP KDI +Y+NSPGGSV G+ IF
Sbjct: 25 DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGSVYDGLGIF 84
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HI+PDV TVCVGLAASMGAFLL AGTKGKR SL +SRIMIHQPLGGAQG SDI +
Sbjct: 85 DTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQPLGGAQGQASDIRI 144
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQ 293
QA+E+L K LN LS TGQ L++I +DTDRDFFMS EA +YGLID V+ +
Sbjct: 145 QADEILFLKERLNKELSDRTGQPLDRIQQDTDRDFFMSPTEAVNYGLIDSVIDK-----R 199
Query: 294 PVAAAA 299
PV A A
Sbjct: 200 PVQAVA 205
>gi|68249290|ref|YP_248402.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 86-028NP]
gi|161350016|ref|NP_438872.3| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae Rd KW20]
gi|260581528|ref|ZP_05849336.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
influenzae RdAW]
gi|1168977|sp|P43867.1|CLPP_HAEIN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|81336285|sp|Q4QMK5.1|CLPP_HAEI8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|1573716|gb|AAC22371.1| ATP-dependent Clp protease, proteolytic subunit (clpP) [Haemophilus
influenzae Rd KW20]
gi|68057489|gb|AAX87742.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 86-028NP]
gi|260091826|gb|EEW75781.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
influenzae RdAW]
Length = 193
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 139/177 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L++ DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDINIYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PD+ T+C+G A SMGAFLL+ GT GKR +LPN+R+MIHQPLGG +G SD
Sbjct: 76 AIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVMIHQPLGGFRGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I + A E+L K LN L++HTGQ +E+I +DTDRD FMSAEEA+ YGL+D V++
Sbjct: 136 IQIHAQEILKIKHTLNDRLAFHTGQGIERIEKDTDRDNFMSAEEAQAYGLVDEVLVK 192
>gi|410612507|ref|ZP_11323584.1| ATP-dependent Clp protease, protease subunit [Glaciecola
psychrophila 170]
gi|410167848|dbj|GAC37473.1| ATP-dependent Clp protease, protease subunit [Glaciecola
psychrophila 170]
Length = 214
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 136/175 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + +I G VED MAN+IVAQLL+L+A +P KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKENVIFLVGQVEDHMANLIVAQLLFLEAENPEKDIFLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+P+VSTVC+G AASMGAFLLSAG KGKRY LPNSR+MIHQPLGG QG SD
Sbjct: 85 AIYDTMNFIKPNVSTVCIGQAASMGAFLLSAGEKGKRYCLPNSRVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
++ A E+L K +N ++ HTGQ EK+ +DTDRD F+SA +A +YGLID V+
Sbjct: 145 FEIHAKEILSIKEKMNRLMAKHTGQEYEKVAQDTDRDNFLSATDAVEYGLIDQVL 199
>gi|398893207|ref|ZP_10646001.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM55]
gi|398184565|gb|EJM72011.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM55]
Length = 211
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 149/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAP 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKRY LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G+TLE+I DT
Sbjct: 126 GKRYCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSA+ A++YGLID V+
Sbjct: 186 NRDNFMSADAAREYGLIDEVI 206
>gi|294670412|ref|ZP_06735294.1| hypothetical protein NEIELOOT_02131 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307876|gb|EFE49119.1| hypothetical protein NEIELOOT_02131 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 211
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/203 (55%), Positives = 149/203 (73%), Gaps = 9/203 (4%)
Query: 85 EVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
E+ ++ IPT + + G G R ++ S+L + RII GPV D AN++VAQ+L
Sbjct: 4 EITNNTLIPTVIE-QSGRGE------RAFDIYSRLLKERIIFLVGPVTDHTANLVVAQML 56
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L++ +P+KDI Y++SPGGSVTAGM++FDT+ I+PDVST+C+G AASMGAFLLSAG K
Sbjct: 57 FLESENPDKDIFFYIDSPGGSVTAGMSVFDTMNFIKPDVSTLCLGQAASMGAFLLSAGAK 116
Query: 205 GKRYSLPNSRIMIHQPL--GGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINE 262
GKR++LPNSRIMIHQPL GG G SDI++ A E++ K LN L+ HTGQ LEK+
Sbjct: 117 GKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELIKLKQKLNELLAKHTGQPLEKVER 176
Query: 263 DTDRDFFMSAEEAKDYGLIDGVV 285
DTDRD FMS+E AK+YGLID V+
Sbjct: 177 DTDRDNFMSSEAAKEYGLIDEVI 199
>gi|259909254|ref|YP_002649610.1| ATP-dependent Clp protease proteolytic subunit [Erwinia pyrifoliae
Ep1/96]
gi|224964876|emb|CAX56398.1| Putative ATP-dependent Clp protease proteolytic subunit [Erwinia
pyrifoliae Ep1/96]
Length = 207
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/208 (51%), Positives = 146/208 (70%), Gaps = 7/208 (3%)
Query: 78 WSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMAN 137
+S +L P +P + G R ++ S+L + RII G VED MAN
Sbjct: 3 YSGERELTAPHMALVPMVVEQTSRGE-------RSYDIYSRLLKERIIFLTGQVEDHMAN 55
Query: 138 IIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAF 197
+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DT++ I+PDVST+C+G A SMGAF
Sbjct: 56 LIVAQMLFLEAENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAF 115
Query: 198 LLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTL 257
LL+AG KGKRY LPNSR+MIHQPLGG QG SDID+ A E++ K +N ++ HTGQT+
Sbjct: 116 LLTAGAKGKRYCLPNSRVMIHQPLGGFQGQASDIDIHAREIIKTKQMMNELMAKHTGQTI 175
Query: 258 EKINEDTDRDFFMSAEEAKDYGLIDGVV 285
E I DT+RD F+SA E+ +YGL+D V+
Sbjct: 176 ETIERDTNRDRFLSASESVEYGLVDSVL 203
>gi|157146946|ref|YP_001454265.1| hypothetical protein CKO_02723 [Citrobacter koseri ATCC BAA-895]
gi|157084151|gb|ABV13829.1| hypothetical protein CKO_02723 [Citrobacter koseri ATCC BAA-895]
Length = 243
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 68 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 127
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 128 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 187
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 188 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSASEAVEYGLVDSIL 239
>gi|365156025|ref|ZP_09352363.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus smithii
7_3_47FAA]
gi|363627734|gb|EHL78586.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus smithii
7_3_47FAA]
Length = 197
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D +AN IVAQLL+L+A +P KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIMLGSAIDDTVANSIVAQLLFLEAENPEKDISIYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDV T+C+G+AASMGAFLL+AGTKGKRY+LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTMQFIKPDVQTICIGMAASMGAFLLAAGTKGKRYALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +L K LN LS TGQ LE I +DTDRD FM+A+ AK+YGLID ++
Sbjct: 136 IEIAAKRILFLKDKLNKILSERTGQPLEVIEKDTDRDNFMTAQRAKEYGLIDHII 190
>gi|354559730|ref|ZP_08978975.1| ATP-dependent Clp protease proteolytic subunit [Desulfitobacterium
metallireducens DSM 15288]
gi|353540550|gb|EHC10024.1| ATP-dependent Clp protease proteolytic subunit [Desulfitobacterium
metallireducens DSM 15288]
Length = 204
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/188 (56%), Positives = 147/188 (78%), Gaps = 6/188 (3%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP++DD+AN+IVAQLL+L+A DP KDI +Y+NSPGGS++AGM
Sbjct: 17 RSYDIYSRLLKDRIIFLGGPIDDDVANLIVAQLLFLEAEDPEKDIFLYINSPGGSISAGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPL---GGAQGG 227
AI+DT+++IRPDV T+CVGLAASMGAFLL++G KGKR +LPN+ I+IHQPL GG G
Sbjct: 77 AIYDTMQYIRPDVHTICVGLAASMGAFLLTSGAKGKRTALPNAEILIHQPLIGGGGISGQ 136
Query: 228 QSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
+++++ A +L +A +N L+ TGQT+EKI DT+RD +M+A+EAK+YGL+D V+
Sbjct: 137 ATEVEIHAKHLLQVRARMNRILAERTGQTVEKIEADTERDHYMTADEAKEYGLVDEVL-- 194
Query: 288 PHKILQPV 295
KI PV
Sbjct: 195 -EKIATPV 201
>gi|383816700|ref|ZP_09972092.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. M24T3]
gi|383294412|gb|EIC82754.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. M24T3]
Length = 209
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMG+FLL+AG KGKRY+LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQACSMGSFLLTAGAKGKRYALPNSRVMIHQPLGGFQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
ID+ A E+L K +N ++ HTG++LE+I DT+RD F+SA EA +YGL+D V+
Sbjct: 149 IDIHAREILKVKNRMNTLMAQHTGKSLEEIERDTERDRFLSASEAVEYGLVDKVM 203
>gi|410659338|ref|YP_006911709.1| ATP-dependent Clp protease proteolytic subunit [Dehalobacter sp.
DCA]
gi|410662325|ref|YP_006914696.1| ATP-dependent Clp protease proteolytic subunit [Dehalobacter sp.
CF]
gi|409021693|gb|AFV03724.1| ATP-dependent Clp protease proteolytic subunit [Dehalobacter sp.
DCA]
gi|409024681|gb|AFV06711.1| ATP-dependent Clp protease proteolytic subunit [Dehalobacter sp.
CF]
Length = 209
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 144/180 (80%), Gaps = 3/180 (1%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GG ++D++AN++VAQLL+L+A DP KD+ +Y+NSPGGS+TAGM
Sbjct: 17 RSYDIYSRLLKDRIIFLGGAIDDNVANVVVAQLLFLEAEDPEKDVFIYINSPGGSITAGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPL---GGAQGG 227
AI+DT+++IRPDV T+C+G+AASMGAFLL+AGTKGKR +LPN+ I+IHQPL GG G
Sbjct: 77 AIYDTMQYIRPDVQTICIGMAASMGAFLLAAGTKGKRAALPNAEILIHQPLIAGGGLSGQ 136
Query: 228 QSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
++I++ A ++L K +N L+ TGQ L+K+ +DTDRD++MSAEEAK+YG++D V N
Sbjct: 137 ATEIEIHAKQLLKTKNKMNRILAERTGQPLDKVEQDTDRDYYMSAEEAKEYGIVDRVQEN 196
>gi|285017388|ref|YP_003375099.1| ATP-dependent clp protease proteolytic subunit protein [Xanthomonas
albilineans GPE PC73]
gi|283472606|emb|CBA15111.1| probable atp-dependent clp protease proteolytic subunit protein
[Xanthomonas albilineans GPE PC73]
Length = 208
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/185 (57%), Positives = 144/185 (77%), Gaps = 1/185 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GP++D MAN++VAQLL+L+A +P KDI +Y+NSPGG VTAGM
Sbjct: 23 RAYDIYSRLLKERLIFLVGPIDDHMANVVVAQLLFLEADNPEKDISLYINSPGGVVTAGM 82
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG AASMGA LL++G GKRY+LPNSR+MIHQPLGG QG +D
Sbjct: 83 AIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATD 142
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV-MNPH 289
ID+ A E+L +A LN L+ HTGQ+LE I DT+RD F SA +A+ YGL+D V+ P
Sbjct: 143 IDIHAREILTLRARLNEVLAKHTGQSLETIARDTERDNFKSAIDAQAYGLVDQVLERRPD 202
Query: 290 KILQP 294
+ +QP
Sbjct: 203 ESIQP 207
>gi|238018907|ref|ZP_04599333.1| hypothetical protein VEIDISOL_00767 [Veillonella dispar ATCC 17748]
gi|237864391|gb|EEP65681.1| hypothetical protein VEIDISOL_00767 [Veillonella dispar ATCC 17748]
Length = 197
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 148/195 (75%), Gaps = 7/195 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
Y+P + + G R ++ S+L + RII GGP++D++AN ++AQ+L+L+A D
Sbjct: 2 YVPIVVEQSERGE-------RSYDIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAED 54
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P+KDI +Y+NSPGG VTAGMAI+DT+++I+PDVST+CVG AASMGA LL+AG KGKRY+L
Sbjct: 55 PDKDIHLYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGAKGKRYAL 114
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
P++R+MIHQPLGG QG S+I++ A E+L + LNG L+ +GQ +E + DTDRD FM
Sbjct: 115 PHARVMIHQPLGGVQGQASEIEIHAREILRMREELNGILASRSGQDIEVVARDTDRDNFM 174
Query: 271 SAEEAKDYGLIDGVV 285
SA++A +YGLID V+
Sbjct: 175 SAQDAVEYGLIDEVL 189
>gi|325922708|ref|ZP_08184448.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas
gardneri ATCC 19865]
gi|325546825|gb|EGD17939.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas
gardneri ATCC 19865]
Length = 196
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/185 (57%), Positives = 144/185 (77%), Gaps = 1/185 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GP++D MAN+IVAQLL+L+A +P KDI +Y+NSPGG VTAGM
Sbjct: 11 RAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGM 70
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG AASMGA LL++G GKRY+LPNSR+MIHQPLGG QG +D
Sbjct: 71 AIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATD 130
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV-MNPH 289
ID+ A E+L ++ LN L+ HTGQ+LE I DT+RD F SA +A+ YGL+D V+ P
Sbjct: 131 IDIHAREILTLRSRLNEILAKHTGQSLETIGRDTERDNFKSAVDAQAYGLVDQVLERRPE 190
Query: 290 KILQP 294
+ +QP
Sbjct: 191 ESIQP 195
>gi|295695312|ref|YP_003588550.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kyrpidia
tusciae DSM 2912]
gi|295410914|gb|ADG05406.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kyrpidia
tusciae DSM 2912]
Length = 196
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D +AN++VAQLL+L A D KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIFLGTGIDDIVANLVVAQLLFLAAEDDKKDIRLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVSTVC+G+AASMGAFLL+AGTKGKR++LPNS IMIHQPLGG +G +D
Sbjct: 76 AIYDTMQYIKPDVSTVCIGMAASMGAFLLAAGTKGKRFALPNSEIMIHQPLGGVRGQAAD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A+ +L K +N LS TGQ LEKI DTDRD FM AEEAK YGLID V+
Sbjct: 136 IKIHADWILRTKDKINRILSERTGQPLEKIERDTDRDNFMDAEEAKAYGLIDEVI 190
>gi|218440073|ref|YP_002378402.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanothece sp.
PCC 7424]
gi|218172801|gb|ACK71534.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7424]
Length = 229
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G ++D++A+ IVAQLLYLDA DP KDI +Y+NSPGGSV AG+
Sbjct: 39 RAFDIYSRLLRERIVFLGTAIDDNVADSIVAQLLYLDAEDPEKDIQIYINSPGGSVYAGL 98
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ IRPDV T+C GLAASMGAFLLS G KGKR +LP++R+MIHQP+GGAQG +
Sbjct: 99 AIYDTMQQIRPDVVTICFGLAASMGAFLLSGGAKGKRMALPSARMMIHQPIGGAQGQAVE 158
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
ID+QA E+L+ K LN L+ HTGQ ++I EDT+RDF+MSA +AK+YGLID V+
Sbjct: 159 IDIQAKEILYIKQRLNTLLAEHTGQPYDRIAEDTERDFYMSAYDAKNYGLIDQVI 213
>gi|73541074|ref|YP_295594.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia eutropha
JMP134]
gi|124013825|sp|Q472D3.1|CLPP_RALEJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|72118487|gb|AAZ60750.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ralstonia
eutropha JMP134]
Length = 216
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 149/192 (77%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
QG G PM++ GR + ++ S+L + R++ G V D AN++VAQLL+L++ +P+K
Sbjct: 21 QGLGLVPMVVEQSGRGERAYDIYSRLLKERVVFLVGEVNDQTANLVVAQLLFLESENPDK 80
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI +Y+NSPGGSV+AG+AI+DT++ ++PDV T+C+G+AASMGAFLL+AG KGKR +LPNS
Sbjct: 81 DISLYINSPGGSVSAGLAIYDTMQFVKPDVQTLCMGMAASMGAFLLAAGAKGKRSALPNS 140
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
RIMIHQPLGGA+G SDI++QA E+L+ + LN LS TGQ +EKI DTDRD FMS +
Sbjct: 141 RIMIHQPLGGARGQASDIEIQAREILYLRERLNSILSEVTGQPVEKIARDTDRDNFMSGD 200
Query: 274 EAKDYGLIDGVV 285
+A DYGLID V+
Sbjct: 201 QAVDYGLIDKVI 212
>gi|289551370|ref|YP_003472274.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis HKU09-01]
gi|315658877|ref|ZP_07911744.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis M23590]
gi|418415755|ref|ZP_12988958.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis ACS-027-V-Sch2]
gi|418636869|ref|ZP_13199207.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus lugdunensis VCU139]
gi|289180901|gb|ADC88146.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis HKU09-01]
gi|315496001|gb|EFU84329.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis M23590]
gi|374840430|gb|EHS03924.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus lugdunensis VCU139]
gi|410873613|gb|EKS21547.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis ACS-027-V-Sch2]
Length = 195
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 141/179 (78%), Gaps = 1/179 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPH 289
I++ AN +L + LN L+ TGQ++E+I +DTDRD F++AEEAK YGLID VM P
Sbjct: 136 IEIAANHILKTREKLNRILAERTGQSIEQIQKDTDRDNFLTAEEAKAYGLIDE-VMEPE 193
>gi|290474663|ref|YP_003467543.1| clpA-clpP ATP-dependent serine protease proteolytic subunit
[Xenorhabdus bovienii SS-2004]
gi|289173976|emb|CBJ80763.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Xenorhabdus bovienii SS-2004]
Length = 207
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/207 (52%), Positives = 149/207 (71%), Gaps = 7/207 (3%)
Query: 78 WSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMAN 137
+S + D P+ +P + G R ++ S+L + RII GPVED MAN
Sbjct: 3 YSGKQDKYAPNMSLVPMVVEQTARGE-------RAFDIYSRLLKDRIIFLTGPVEDHMAN 55
Query: 138 IIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAF 197
+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DT++ I+PDVST+C+G A SMGAF
Sbjct: 56 LIVAQMLFLEAENPEKDINLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAF 115
Query: 198 LLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTL 257
LL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++ A E+L KA +N ++ HTG+ L
Sbjct: 116 LLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAQEILKVKARMNELMAKHTGKPL 175
Query: 258 EKINEDTDRDFFMSAEEAKDYGLIDGV 284
EKI EDT+RD F+SA E+ +YGL+D +
Sbjct: 176 EKIVEDTERDRFLSAAESVEYGLVDSI 202
>gi|113867496|ref|YP_725985.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia eutropha
H16]
gi|194289504|ref|YP_002005411.1| ATP-dependent clp protease proteolytic subunit [Cupriavidus
taiwanensis LMG 19424]
gi|339325652|ref|YP_004685345.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus necator
N-1]
gi|123033071|sp|Q0KBK4.1|CLPP_RALEH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706449|sp|B3R4W1.1|CLPP_CUPTR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|113526272|emb|CAJ92617.1| Endopeptidase Clp (type 1) [Ralstonia eutropha H16]
gi|193223339|emb|CAQ69344.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Cupriavidus taiwanensis LMG 19424]
gi|338165809|gb|AEI76864.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus necator
N-1]
Length = 216
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 150/192 (78%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
QG G PM++ GR + ++ S+L + R++ G V D AN++VAQLL+L++ +P+K
Sbjct: 21 QGLGLVPMVVEQSGRGERAYDIYSRLLKERVVFMVGEVNDQTANLVVAQLLFLESENPDK 80
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
D+ +Y+NSPGGSV+AG+AI+DT++ I+PDVST+C+G+AASMGAFLL+AG KGKR +LPNS
Sbjct: 81 DVSLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCMGMAASMGAFLLAAGAKGKRSALPNS 140
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
RIMIHQPLGGA+G SDI++QA E+L+ + LN LS TGQ +EKI DTDRD FMS +
Sbjct: 141 RIMIHQPLGGARGQASDIEIQAREILYLRERLNTILSEVTGQPVEKIARDTDRDNFMSGD 200
Query: 274 EAKDYGLIDGVV 285
+A DYGLID V+
Sbjct: 201 QAVDYGLIDKVL 212
>gi|436653600|ref|ZP_20516817.1| ATP-dependent Clp protease, proteolytic subunit ClpP, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE30663]
gi|435025338|gb|ELM15494.1| ATP-dependent Clp protease, proteolytic subunit ClpP, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE30663]
Length = 225
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 50 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 109
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 110 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 169
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 170 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 221
>gi|398808177|ref|ZP_10567045.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Variovorax
sp. CF313]
gi|398088223|gb|EJL78790.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Variovorax
sp. CF313]
Length = 202
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/196 (56%), Positives = 151/196 (77%), Gaps = 6/196 (3%)
Query: 96 AQGEQGGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAV 149
AQ QG G PM++ GR + ++ S+L + RII G V D AN++VAQLL+L++
Sbjct: 3 AQEIQGLGMVPMVIEQSGRGERSYDIYSRLLKERIIFLVGEVNDQTANLVVAQLLFLESE 62
Query: 150 DPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS 209
+P+KDI Y+NSPGGSV+AGMAI+DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+S
Sbjct: 63 NPDKDISFYINSPGGSVSAGMAIYDTMQFIKPDVSTMCLGFAASMGAFLLAAGEKGKRFS 122
Query: 210 LPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFF 269
LPNS+IMIHQ LGGA+G +DI++ A ++L K +N L+ TGQ LEK+ DT+RD+F
Sbjct: 123 LPNSKIMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPLEKVKTDTERDYF 182
Query: 270 MSAEEAKDYGLIDGVV 285
++A+EAK+YGL+D VV
Sbjct: 183 LTADEAKEYGLVDQVV 198
>gi|148239550|ref|YP_001224937.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7803]
gi|147848089|emb|CAK23640.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
Length = 196
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/172 (65%), Positives = 132/172 (76%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V + AN IVAQLL+L+A DP KDI +Y+NSPGGSV G+ IF
Sbjct: 17 DIYSRLLRERIIFLGEAVTSESANRIVAQLLFLEAEDPEKDIFLYINSPGGSVYDGLGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HI+PDV TVCVGLAASMGAFLL AG KGKR SL +SRIMIHQPLGGA+G SDI +
Sbjct: 77 DTMQHIKPDVQTVCVGLAASMGAFLLCAGAKGKRSSLRHSRIMIHQPLGGARGQASDIRI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA+E+L K LN LS T Q LEKI EDTDRDFFMS EA DYGLID V+
Sbjct: 137 QADEILFLKNRLNQELSERTSQPLEKIQEDTDRDFFMSPNEAVDYGLIDSVI 188
>gi|15645413|ref|NP_207587.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
26695]
gi|108563204|ref|YP_627520.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
HPAG1]
gi|207108488|ref|ZP_03242650.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
HPKX_438_CA4C1]
gi|2493736|sp|P56156.1|CLPP_HELPY RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|185177747|pdb|2ZL0|A Chain A, Crystal Structure Of H.Pylori Clpp
gi|185177748|pdb|2ZL0|B Chain B, Crystal Structure Of H.Pylori Clpp
gi|185177749|pdb|2ZL0|C Chain C, Crystal Structure Of H.Pylori Clpp
gi|185177750|pdb|2ZL0|D Chain D, Crystal Structure Of H.Pylori Clpp
gi|185177751|pdb|2ZL0|E Chain E, Crystal Structure Of H.Pylori Clpp
gi|185177752|pdb|2ZL0|F Chain F, Crystal Structure Of H.Pylori Clpp
gi|185177753|pdb|2ZL0|G Chain G, Crystal Structure Of H.Pylori Clpp
gi|185177754|pdb|2ZL0|H Chain H, Crystal Structure Of H.Pylori Clpp
gi|185177755|pdb|2ZL0|I Chain I, Crystal Structure Of H.Pylori Clpp
gi|185177756|pdb|2ZL0|J Chain J, Crystal Structure Of H.Pylori Clpp
gi|185177757|pdb|2ZL0|K Chain K, Crystal Structure Of H.Pylori Clpp
gi|185177758|pdb|2ZL0|L Chain L, Crystal Structure Of H.Pylori Clpp
gi|185177759|pdb|2ZL0|M Chain M, Crystal Structure Of H.Pylori Clpp
gi|185177760|pdb|2ZL0|N Chain N, Crystal Structure Of H.Pylori Clpp
gi|185177761|pdb|2ZL2|A Chain A, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177762|pdb|2ZL2|B Chain B, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177763|pdb|2ZL2|C Chain C, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177764|pdb|2ZL2|D Chain D, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177765|pdb|2ZL2|E Chain E, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177766|pdb|2ZL2|F Chain F, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177767|pdb|2ZL2|G Chain G, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177768|pdb|2ZL2|H Chain H, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177769|pdb|2ZL2|I Chain I, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177770|pdb|2ZL2|J Chain J, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177771|pdb|2ZL2|K Chain K, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177772|pdb|2ZL2|L Chain L, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177773|pdb|2ZL2|M Chain M, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177774|pdb|2ZL2|N Chain N, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|2313923|gb|AAD07842.1| ATP-dependent clp protease proteolytic component (clpP)
[Helicobacter pylori 26695]
gi|107836977|gb|ABF84846.1| ATP-dependent clp protease proteolytic component [Helicobacter
pylori HPAG1]
Length = 196
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 143/180 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G + D +A+ IVAQLL+L+A DP KDI +Y+NSPGG +T+G+
Sbjct: 17 RSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGL 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ IRPDVST+C+G AASMGAFLLS G KGKR+SLP+SRIMIHQPLGGAQG SD
Sbjct: 77 SIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ +NE+L K +N L+ ++GQ+LE+I +DTDRDF+MSA+EAK+YGLID V+ K
Sbjct: 137 IEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK 196
>gi|401678822|ref|ZP_10810776.1| ClpP Protein [Enterobacter sp. SST3]
gi|400213918|gb|EJO44850.1| ClpP Protein [Enterobacter sp. SST3]
Length = 207
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 138/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L KA +N ++ HTGQ LE+I DT+RD F+SA EA +YGL+D V+
Sbjct: 152 HAREILKVKARMNELMAQHTGQPLEQIERDTERDRFLSASEAVEYGLVDSVL 203
>gi|313144547|ref|ZP_07806740.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
cinaedi CCUG 18818]
gi|313129578|gb|EFR47195.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
cinaedi CCUG 18818]
gi|396078308|dbj|BAM31684.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
cinaedi ATCC BAA-847]
Length = 196
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 140/180 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G + D +A+ IVAQLL+L+A DP+KDI Y+NSPGG +T+
Sbjct: 17 RSYDIYSRLLKDRIILLSGEINDHIASSIVAQLLFLEAEDPDKDINFYINSPGGVITSAF 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ +IR D+ST+C+G AAS GAFLLS+GTKGKR+SLPNSRIMIHQPLGGAQG +D
Sbjct: 77 SIYDTMNYIRSDISTICIGQAASAGAFLLSSGTKGKRFSLPNSRIMIHQPLGGAQGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L K LN ++ +TGQ++E I +DT+RDFFMS EEAKDYGL+D ++ K
Sbjct: 137 IEIQAKEILRLKKILNEIMAENTGQSVENITQDTERDFFMSGEEAKDYGLVDKILTKSLK 196
>gi|380510628|ref|ZP_09854035.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
sacchari NCPPB 4393]
Length = 208
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 144/185 (77%), Gaps = 1/185 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GP++D MAN+IVAQLL+L+A +P KDI +Y+NSPGG VTAGM
Sbjct: 23 RAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGM 82
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG AASMGA LL++G GKRY+LPNSR+MIHQPLGG QG +D
Sbjct: 83 AIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATD 142
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV-MNPH 289
ID+ A E+L +A LN L+ HTGQ+LE I DT+RD F SA +A+ YGL+D V+ P
Sbjct: 143 IDIHAREILTLRARLNEILAKHTGQSLETIARDTERDNFKSAIDAQAYGLVDQVLERRPD 202
Query: 290 KILQP 294
+ +QP
Sbjct: 203 ESIQP 207
>gi|295696500|ref|YP_003589738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kyrpidia
tusciae DSM 2912]
gi|295412102|gb|ADG06594.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kyrpidia
tusciae DSM 2912]
Length = 192
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 135/175 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +AN ++AQLL+L A DP KD+ +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKDRIIFLGTPIDDQVANSVIAQLLFLAAEDPEKDVSLYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI DT+++IRPDV+T+CVG+AASM A LL+AG KGKR +LPNS IMIHQPLGG QG D
Sbjct: 76 AILDTMQYIRPDVATICVGMAASMAAVLLAAGAKGKRRALPNSEIMIHQPLGGVQGQAVD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A+ +L + LN LS TGQ L +I EDTDRD FMSA+EAK+YGLID V+
Sbjct: 136 IKIHADRILRVREKLNRILSERTGQPLSRIEEDTDRDRFMSADEAKEYGLIDDVI 190
>gi|188534634|ref|YP_001908431.1| ATP-dependent Clp protease proteolytic subunit [Erwinia
tasmaniensis Et1/99]
gi|188029676|emb|CAO97555.1| Putative ATP-dependent Clp protease proteolytic subunit [Erwinia
tasmaniensis Et1/99]
Length = 207
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/208 (51%), Positives = 146/208 (70%), Gaps = 7/208 (3%)
Query: 78 WSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMAN 137
+S +L P +P + G R ++ S+L + RII G VED MAN
Sbjct: 3 YSGERELTAPHMALVPMVVEQTSRGE-------RSYDIYSRLLKERIIFLTGQVEDHMAN 55
Query: 138 IIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAF 197
+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DT++ I+PDVST+C+G A SMGAF
Sbjct: 56 LIVAQMLFLEAENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAF 115
Query: 198 LLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTL 257
LL+AG KGKRY LPNSR+MIHQPLGG QG SDID+ A E++ K +N ++ HTGQT+
Sbjct: 116 LLTAGAKGKRYCLPNSRVMIHQPLGGFQGQASDIDIHAREIIKTKQMMNELMAKHTGQTI 175
Query: 258 EKINEDTDRDFFMSAEEAKDYGLIDGVV 285
E I DT+RD F+SA E+ +YGL+D V+
Sbjct: 176 ETIERDTNRDRFLSASESVEYGLVDSVL 203
>gi|148238406|ref|YP_001223793.1| protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
gi|147846945|emb|CAK22496.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
Length = 229
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V+D +A+ +VAQ+L+L+A DP KDI +Y+NSPGGSVTAG+
Sbjct: 43 RAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQVYINSPGGSVTAGL 102
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ + PDV T+C GLAASMGAFLLS GTKGKR +LPN+RIMIHQP+GGAQG D
Sbjct: 103 AIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPMGGAQGQAVD 162
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L K LNG ++ HTGQ L+KI EDTDRD FMS +A DYGLID VV
Sbjct: 163 IEIQAKEILFLKETLNGLMAEHTGQPLDKIAEDTDRDNFMSPAQAVDYGLIDRVV 217
>gi|386388774|ref|ZP_10073627.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus paraphrohaemolyticus HK411]
gi|385697288|gb|EIG27723.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus paraphrohaemolyticus HK411]
Length = 197
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED+MAN+IVAQLL+L+A DP KDI +Y+NSPGG VTAG+
Sbjct: 16 RSYDIFSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPGGVVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDV+T+C G A SMGAFLLS G KGKR++LPN+R+MIHQPLGGA+G +D
Sbjct: 76 AIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I +QA E+L K L ++ H+GQ+ EK+ DT+RD FMSA+EA +YGLID V+
Sbjct: 136 IQIQAQEILKLKEMLTRKMAEHSGQSFEKVAADTERDNFMSAQEAMEYGLIDKVL 190
>gi|350546001|ref|ZP_08915432.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Burkholderia kirkii UZHbot1]
gi|350526222|emb|CCD41030.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Burkholderia kirkii UZHbot1]
Length = 217
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R++ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 39 RAYDIYSRLLKERVVFLVGEVNDQSANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 98
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ ++PDVST+C+GLAASMGAFLL+AG KGKR +LPN+R+MIHQPLGG +G SD
Sbjct: 99 AIYDTMQFVKPDVSTLCIGLAASMGAFLLAAGAKGKRVTLPNARVMIHQPLGGTRGQASD 158
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN LS+HTGQ +E+I DTDRD FMS ++A+ YGL+D V+
Sbjct: 159 IEIQAREILYLKERLNQLLSHHTGQPVERIARDTDRDNFMSGDDAQAYGLVDQVL 213
>gi|387782216|ref|YP_005792929.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
51]
gi|387907882|ref|YP_006338216.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
XZ274]
gi|261837975|gb|ACX97741.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
51]
gi|387572817|gb|AFJ81525.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
XZ274]
Length = 196
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G + D +A+ IVAQLL+L+A DP KDI +Y+NSPGG +T+G+
Sbjct: 17 RSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGL 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ IRPDVST+C+G AASMGAFLLS G KGKR+SLP+SRIMIHQPLGGAQG SD
Sbjct: 77 SIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ +NE+L K +N L+ ++GQ+LE+I +DTDRDF+MSA+EAK+YGLID V+
Sbjct: 137 IEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVL 191
>gi|152968972|ref|YP_001334081.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|262042473|ref|ZP_06015632.1| ATP-dependent Clp protease [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330011533|ref|ZP_08307119.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Klebsiella sp. MS 92-3]
gi|378977299|ref|YP_005225440.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae HS11286]
gi|402782116|ref|YP_006637662.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|421908672|ref|ZP_16338507.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421918682|ref|ZP_16348197.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|150953821|gb|ABR75851.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|259040177|gb|EEW41289.1| ATP-dependent Clp protease [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328534150|gb|EGF60785.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Klebsiella sp. MS 92-3]
gi|364516710|gb|AEW59838.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae HS11286]
gi|402542978|gb|AFQ67127.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|410117463|emb|CCM81132.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410118949|emb|CCM90822.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
Length = 194
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 19 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 78
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 79 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 138
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 139 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAAEAVEYGLVDSIL 190
>gi|183601061|ref|ZP_02962554.1| hypothetical protein PROSTU_04684 [Providencia stuartii ATCC 25827]
gi|386742738|ref|YP_006215917.1| ATP-dependent Clp protease proteolytic subunit [Providencia
stuartii MRSN 2154]
gi|188019401|gb|EDU57441.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Providencia stuartii ATCC 25827]
gi|384479431|gb|AFH93226.1| ATP-dependent Clp protease proteolytic subunit [Providencia
stuartii MRSN 2154]
Length = 206
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 140/174 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIQLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMG+FLL+AGTKGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQACSMGSFLLAAGTKGKRFCLPNSRVMIHQPLGGYQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I + A E+L K +N ++ HTG+++E+IN DT+RD F+SA+EAK+YGL+D +
Sbjct: 149 IQIHAQEILKVKTRMNELMALHTGKSVEEINRDTERDRFLSADEAKEYGLVDHI 202
>gi|381170418|ref|ZP_09879575.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xanthomonas
citri pv. mangiferaeindicae LMG 941]
gi|384426842|ref|YP_005636199.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xanthomonas
campestris pv. raphani 756C]
gi|390990707|ref|ZP_10260988.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|341935942|gb|AEL06081.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xanthomonas
campestris pv. raphani 756C]
gi|372554560|emb|CCF67963.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|380689079|emb|CCG36062.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xanthomonas
citri pv. mangiferaeindicae LMG 941]
Length = 196
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/185 (57%), Positives = 144/185 (77%), Gaps = 1/185 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GP++D MAN+IVAQLL+L+A +P KDI +Y+NSPGG VTAGM
Sbjct: 11 RAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGM 70
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG AASMGA LL++G GKRY+LPNSR+MIHQPLGG QG +D
Sbjct: 71 AIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATD 130
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV-MNPH 289
ID+ A E+L ++ LN L+ HTGQ+LE I DT+RD F SA +A+ YGL+D V+ P
Sbjct: 131 IDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFKSAVDAQAYGLVDQVLERRPE 190
Query: 290 KILQP 294
+ +QP
Sbjct: 191 ESIQP 195
>gi|262276278|ref|ZP_06054087.1| ATP-dependent Clp protease proteolytic subunit [Grimontia hollisae
CIP 101886]
gi|262220086|gb|EEY71402.1| ATP-dependent Clp protease proteolytic subunit [Grimontia hollisae
CIP 101886]
Length = 207
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN++VAQLL+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+++I+PDVSTVC+G A SMGAFLL+ G KGKRY LPNSR+MIHQPLGG QG SD
Sbjct: 89 SIYDTMQYIKPDVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRVMIHQPLGGFQGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ HTGQ LE I DTDRD FM+A++A +YGL+D V+
Sbjct: 149 IQIHAQEILTIKHRLNTLLAEHTGQPLEVIERDTDRDNFMAAQDAVNYGLVDAVL 203
>gi|318041532|ref|ZP_07973488.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CB0101]
Length = 196
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/172 (64%), Positives = 134/172 (77%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G PV + AN IVAQLL+L+A DP KDI +Y+NSPGGSV G+ IF
Sbjct: 17 DIYSRLLRERIIFLGEPVTSESANRIVAQLLFLEAEDPEKDIYLYINSPGGSVYDGLGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HI+PDV TVCVGLAASMGAFLL AG KGKR SL +SRIMIHQPLGGA+G SDI +
Sbjct: 77 DTMQHIKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLTHSRIMIHQPLGGARGQASDIRI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA+E+L+ K LN L+ TGQ L +I EDTDRDFFMS EA +YGLID V+
Sbjct: 137 QADEILYLKKKLNQELADRTGQPLSRIEEDTDRDFFMSPAEAAEYGLIDKVI 188
>gi|383787009|ref|YP_005471578.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium pennivorans DSM 9078]
gi|383109856|gb|AFG35459.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium pennivorans DSM 9078]
Length = 206
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/180 (57%), Positives = 145/180 (80%), Gaps = 3/180 (1%)
Query: 110 GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSV 166
GR++ ++ S+L + RII G ++D +AN++VAQLL+L+A +P+KDI +Y+NSPGG V
Sbjct: 23 GRYERAYDIYSRLLKDRIIFLGSAIDDHVANLVVAQLLFLEAENPDKDIQLYINSPGGLV 82
Query: 167 TAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQG 226
TAG+AI+DT+++++ DV+T+C+G AASM A LL+AG KGKR++LPNSRIMIHQPLGGA+G
Sbjct: 83 TAGLAIYDTMQYVKCDVATICIGQAASMAAVLLAAGAKGKRFALPNSRIMIHQPLGGAEG 142
Query: 227 GQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVM 286
D+++ E+L K +N LS HTGQ +EKI +DTDRDFFMSA+EAK+YG+ID V+M
Sbjct: 143 TAKDVEILTKELLRIKHLINEILSKHTGQPIEKIEKDTDRDFFMSAQEAKEYGIIDRVIM 202
>gi|292487467|ref|YP_003530339.1| ATP-dependent Clp protease proteolytic subunit ClpP [Erwinia
amylovora CFBP1430]
gi|292898709|ref|YP_003538078.1| ATP-dependent clp protease proteolytic subunit [Erwinia amylovora
ATCC 49946]
gi|428784402|ref|ZP_19001893.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
amylovora ACW56400]
gi|291198557|emb|CBJ45665.1| ATP-dependent clp protease proteolytic subunit [Erwinia amylovora
ATCC 49946]
gi|291552886|emb|CBA19931.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
amylovora CFBP1430]
gi|312171571|emb|CBX79829.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
amylovora ATCC BAA-2158]
gi|426275964|gb|EKV53691.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
amylovora ACW56400]
Length = 207
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/208 (51%), Positives = 146/208 (70%), Gaps = 7/208 (3%)
Query: 78 WSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMAN 137
+S +L P +P + G R ++ S+L + RII G VED MAN
Sbjct: 3 YSGERELTAPHMALVPMVVEQTSRGE-------RSYDIYSRLLKERIIFLTGQVEDHMAN 55
Query: 138 IIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAF 197
+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DT++ I+PDVST+C+G A SMGAF
Sbjct: 56 LIVAQMLFLEAENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAF 115
Query: 198 LLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTL 257
LL+AG KGKRY LPNSR+MIHQPLGG QG SDID+ A E++ K +N ++ HTGQT+
Sbjct: 116 LLTAGAKGKRYCLPNSRVMIHQPLGGFQGQASDIDIHAREIIKTKQMMNELMAKHTGQTI 175
Query: 258 EKINEDTDRDFFMSAEEAKDYGLIDGVV 285
E I DT+RD F+SA E+ +YGL+D V+
Sbjct: 176 ENIERDTNRDRFLSASESVEYGLVDSVL 203
>gi|237730414|ref|ZP_04560895.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226905953|gb|EEH91871.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 243
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 68 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 127
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 128 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 187
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 188 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSASEAVEYGLVDSIL 239
>gi|188527362|ref|YP_001910049.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Shi470]
gi|217034159|ref|ZP_03439579.1| hypothetical protein HP9810_868g52 [Helicobacter pylori 98-10]
gi|308182950|ref|YP_003927077.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
PeCan4]
gi|384887561|ref|YP_005762072.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
52]
gi|384889426|ref|YP_005763728.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori v225d]
gi|384892817|ref|YP_005766910.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Cuz20]
gi|384894168|ref|YP_005768217.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Sat464]
gi|384895926|ref|YP_005769915.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
35A]
gi|385216028|ref|YP_005775985.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
F32]
gi|385217327|ref|YP_005778803.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
F16]
gi|385228517|ref|YP_005788450.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Puno120]
gi|385230075|ref|YP_005789991.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Puno135]
gi|385249309|ref|YP_005777528.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
F57]
gi|386751182|ref|YP_006224402.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Shi417]
gi|386752776|ref|YP_006225995.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Shi169]
gi|386754096|ref|YP_006227314.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Shi112]
gi|420395464|ref|ZP_14894691.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY1124]
gi|420400395|ref|ZP_14899596.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY3281]
gi|420404828|ref|ZP_14904008.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY6271]
gi|420406978|ref|ZP_14906148.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY6311]
gi|425789376|ref|YP_007017296.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Aklavik117]
gi|226706455|sp|B2UT37.1|CLPP_HELPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|188143602|gb|ACD48019.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Shi470]
gi|216943443|gb|EEC22899.1| hypothetical protein HP9810_868g52 [Helicobacter pylori 98-10]
gi|261839391|gb|ACX99156.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
52]
gi|297379992|gb|ADI34879.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori v225d]
gi|308062114|gb|ADO04002.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Cuz20]
gi|308063422|gb|ADO05309.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Sat464]
gi|308065135|gb|ADO07027.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
PeCan4]
gi|315586542|gb|ADU40923.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
35A]
gi|317177376|dbj|BAJ55165.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
F16]
gi|317180557|dbj|BAJ58343.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
F32]
gi|317182104|dbj|BAJ59888.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
F57]
gi|344334955|gb|AEN15399.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Puno120]
gi|344336513|gb|AEN18474.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Puno135]
gi|384557440|gb|AFH97908.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Shi417]
gi|384559034|gb|AFH99501.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Shi169]
gi|384560354|gb|AFI00821.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Shi112]
gi|393013900|gb|EJB15074.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY1124]
gi|393017340|gb|EJB18493.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY3281]
gi|393023815|gb|EJB24929.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY6311]
gi|393024698|gb|EJB25808.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY6271]
gi|425627691|gb|AFX91159.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Aklavik117]
Length = 195
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G + D +A+ IVAQLL+L+A DP KDI +Y+NSPGG +T+G+
Sbjct: 16 RSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ IRPDVST+C+G AASMGAFLLS G KGKR+SLP+SRIMIHQPLGGAQG SD
Sbjct: 76 SIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ +NE+L K +N L+ ++GQ+LE+I +DTDRDF+MSA+EAK+YGLID V+
Sbjct: 136 IEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVL 190
>gi|399520089|ref|ZP_10760870.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399111981|emb|CCH37429.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 213
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/202 (54%), Positives = 146/202 (72%), Gaps = 6/202 (2%)
Query: 89 SPYIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQ 142
+P++ + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQ
Sbjct: 4 NPFMQNMPEIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQ 63
Query: 143 LLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAG 202
LL+L+A +P+KDI +Y+NSPGGSVTAGMAI+DT++ I+ DVST C+G A SMGAFLL+ G
Sbjct: 64 LLFLEAENPDKDIHLYINSPGGSVTAGMAIYDTMQFIKADVSTTCIGQACSMGAFLLAGG 123
Query: 203 TKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINE 262
KGKR+ LPNSR+MIHQPLGG QG SDI++ A E+L + LN L+ HTGQ+LE I
Sbjct: 124 AKGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNELLAQHTGQSLETIER 183
Query: 263 DTDRDFFMSAEEAKDYGLIDGV 284
DT+RD FMSA A +YGL+D V
Sbjct: 184 DTNRDNFMSASRAVEYGLVDAV 205
>gi|208434705|ref|YP_002266371.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
G27]
gi|210134994|ref|YP_002301433.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
P12]
gi|217032887|ref|ZP_03438364.1| hypothetical protein HPB128_152g4 [Helicobacter pylori B128]
gi|298736497|ref|YP_003729023.1| ATP-dependent Clp protease, protease subunit [Helicobacter pylori
B8]
gi|383749543|ref|YP_005424646.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
ELS37]
gi|384897499|ref|YP_005772927.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Lithuania75]
gi|384898903|ref|YP_005774282.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
F30]
gi|385220389|ref|YP_005781861.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
India7]
gi|385222230|ref|YP_005771363.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
SouthAfrica7]
gi|385225257|ref|YP_005785182.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
83]
gi|385227027|ref|YP_005786951.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
SNT49]
gi|410024019|ref|YP_006893272.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Rif1]
gi|410501787|ref|YP_006936314.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Rif2]
gi|410682306|ref|YP_006934708.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
26695]
gi|419417681|ref|ZP_13958093.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
P79]
gi|419418415|ref|ZP_13958741.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
NCTC 11637 = CCUG 17874]
gi|420399014|ref|ZP_14898225.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY1962]
gi|420403721|ref|ZP_14902907.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY6261]
gi|420408931|ref|ZP_14908086.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4216]
gi|420410332|ref|ZP_14909475.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4200]
gi|420413802|ref|ZP_14912924.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4099]
gi|420415169|ref|ZP_14914284.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4053]
gi|420418737|ref|ZP_14917829.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4076]
gi|420420065|ref|ZP_14919152.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4161]
gi|420426786|ref|ZP_14925835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-9]
gi|420430592|ref|ZP_14929620.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-20]
gi|420437210|ref|ZP_14936194.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-28]
gi|420447144|ref|ZP_14946038.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-43]
gi|420450458|ref|ZP_14949319.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-45]
gi|420455107|ref|ZP_14953937.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-14]
gi|420458636|ref|ZP_14957446.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-26]
gi|420460296|ref|ZP_14959095.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-27]
gi|420465522|ref|ZP_14964288.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-6]
gi|420467174|ref|ZP_14965929.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-9]
gi|420470658|ref|ZP_14969367.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-11]
gi|420492818|ref|ZP_14991392.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-15]
gi|420494310|ref|ZP_14992879.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-16]
gi|420496090|ref|ZP_14994654.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-23]
gi|420501584|ref|ZP_15000128.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-30]
gi|420504447|ref|ZP_15002973.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-62]
gi|420526838|ref|ZP_15025239.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-15b]
gi|420531369|ref|ZP_15029742.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-28b]
gi|421710300|ref|ZP_16149657.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R018c]
gi|421713107|ref|ZP_16152438.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R32b]
gi|421715068|ref|ZP_16154386.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R036d]
gi|421716890|ref|ZP_16156198.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R037c]
gi|421718409|ref|ZP_16157708.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R038b]
gi|421719617|ref|ZP_16158901.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R046Wa]
gi|421721752|ref|ZP_16161026.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R055a]
gi|421723576|ref|ZP_16162830.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R056a]
gi|444373992|ref|ZP_21173299.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
A45]
gi|116243140|sp|Q1CT76.2|CLPP_HELPH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706454|sp|B5Z7F6.1|CLPP_HELPG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|208432634|gb|ACI27505.1| ATP-dependent clp protease proteolytic component [Helicobacter
pylori G27]
gi|210132962|gb|ACJ07953.1| ATP-dependent clp protease proteolytic component [Helicobacter
pylori P12]
gi|216945381|gb|EEC24049.1| hypothetical protein HPB128_152g4 [Helicobacter pylori B128]
gi|298355687|emb|CBI66559.1| ATP-dependent Clp protease, protease subunit [Helicobacter pylori
B8]
gi|317009196|gb|ADU79776.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
India7]
gi|317011009|gb|ADU84756.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
SouthAfrica7]
gi|317012604|gb|ADU83212.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Lithuania75]
gi|317178846|dbj|BAJ56634.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
F30]
gi|332673403|gb|AEE70220.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
83]
gi|344331940|gb|AEN16970.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
SNT49]
gi|380874289|gb|AFF20070.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
ELS37]
gi|384372478|gb|EIE28070.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
P79]
gi|384374159|gb|EIE29583.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
NCTC 11637 = CCUG 17874]
gi|393013243|gb|EJB14420.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY1962]
gi|393020887|gb|EJB22026.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY6261]
gi|393023093|gb|EJB24208.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4216]
gi|393027363|gb|EJB28452.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4099]
gi|393028645|gb|EJB29731.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4200]
gi|393032637|gb|EJB33702.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4053]
gi|393033563|gb|EJB34626.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4076]
gi|393037301|gb|EJB38337.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori NQ4161]
gi|393043743|gb|EJB44746.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-9]
gi|393047289|gb|EJB48264.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-20]
gi|393053524|gb|EJB54468.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-28]
gi|393064117|gb|EJB64957.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-43]
gi|393067398|gb|EJB68210.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-45]
gi|393073457|gb|EJB74231.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-14]
gi|393076157|gb|EJB76911.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-26]
gi|393077398|gb|EJB78147.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp A-27]
gi|393081153|gb|EJB81876.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-6]
gi|393084002|gb|EJB84699.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-9]
gi|393086091|gb|EJB86770.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp H-11]
gi|393107257|gb|EJC07800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-15]
gi|393111111|gb|EJC11635.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-16]
gi|393112401|gb|EJC12922.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-23]
gi|393132143|gb|EJC32566.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-15b]
gi|393137041|gb|EJC37428.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-28b]
gi|393150390|gb|EJC50698.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-30]
gi|393154293|gb|EJC54576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori Hp P-62]
gi|407210491|gb|EKE80370.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R018c]
gi|407215922|gb|EKE85760.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R036d]
gi|407216473|gb|EKE86310.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R32b]
gi|407219465|gb|EKE89280.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R037c]
gi|407220940|gb|EKE90745.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R046Wa]
gi|407221675|gb|EKE91479.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R038b]
gi|407224213|gb|EKE93990.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R055a]
gi|407224599|gb|EKE94375.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Helicobacter pylori R056a]
gi|409893947|gb|AFV42005.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
26695]
gi|409895676|gb|AFV43598.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Rif1]
gi|409897338|gb|AFV45192.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Rif2]
gi|443621216|gb|ELT81655.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
A45]
Length = 195
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 143/180 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G + D +A+ IVAQLL+L+A DP KDI +Y+NSPGG +T+G+
Sbjct: 16 RSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ IRPDVST+C+G AASMGAFLLS G KGKR+SLP+SRIMIHQPLGGAQG SD
Sbjct: 76 SIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ +NE+L K +N L+ ++GQ+LE+I +DTDRDF+MSA+EAK+YGLID V+ K
Sbjct: 136 IEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK 195
>gi|260889843|ref|ZP_05901106.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
hofstadii F0254]
gi|260860449|gb|EEX74949.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
hofstadii F0254]
Length = 208
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/175 (62%), Positives = 136/175 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN IVAQLL+LDA D KDI+MY+NSPGG +TAG+
Sbjct: 34 RSYDIYSRLLKDRIIFVSGEVEDGMANAIVAQLLFLDAQDNEKDIVMYINSPGGVITAGL 93
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+RHI+ DVSTVCVG AASMGA LL+AG KGKRYSLPNSRIMIHQPLGGA+G +D
Sbjct: 94 AIYDTMRHIKSDVSTVCVGQAASMGAVLLAAGAKGKRYSLPNSRIMIHQPLGGARGQATD 153
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I +QA E+ K + LS TG+++E+I DT+RD FMS EEA +YGLID ++
Sbjct: 154 IQIQAKEIERMKEITSKILSEATGKSVEEIYADTERDNFMSPEEAVNYGLIDKIL 208
>gi|336249036|ref|YP_004592746.1| hypothetical protein EAE_12765 [Enterobacter aerogenes KCTC 2190]
gi|365104949|ref|ZP_09334341.1| ATP-dependent Clp protease proteolytic subunit [Citrobacter
freundii 4_7_47CFAA]
gi|375259344|ref|YP_005018514.1| hypothetical protein KOX_12745 [Klebsiella oxytoca KCTC 1686]
gi|395228096|ref|ZP_10406420.1| atp-dependent clp protease proteolytic subunit [Citrobacter sp. A1]
gi|397656325|ref|YP_006497027.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
E718]
gi|402843112|ref|ZP_10891514.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Klebsiella sp. OBRC7]
gi|420370111|ref|ZP_14870727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 1235-66]
gi|421843723|ref|ZP_16276883.1| hypothetical protein D186_01745 [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|423101608|ref|ZP_17089310.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5242]
gi|423106996|ref|ZP_17094691.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5243]
gi|423112881|ref|ZP_17100572.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5245]
gi|423127775|ref|ZP_17115454.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5250]
gi|424730593|ref|ZP_18159188.1| atp-dependent clp protease proteolytic subunit [Citrobacter sp.
L17]
gi|440288751|ref|YP_007341516.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Enterobacteriaceae bacterium strain FGI 57]
gi|334735092|gb|AEG97467.1| hypothetical protein EAE_12765 [Enterobacter aerogenes KCTC 2190]
gi|363643890|gb|EHL83194.1| ATP-dependent Clp protease proteolytic subunit [Citrobacter
freundii 4_7_47CFAA]
gi|365908822|gb|AEX04275.1| hypothetical protein KOX_12745 [Klebsiella oxytoca KCTC 1686]
gi|376389122|gb|EHT01814.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5243]
gi|376390375|gb|EHT03061.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5245]
gi|376391396|gb|EHT04075.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5242]
gi|376394814|gb|EHT07464.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5250]
gi|391320540|gb|EIQ77372.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 1235-66]
gi|394344931|gb|AFN31052.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
E718]
gi|394718218|gb|EJF23855.1| atp-dependent clp protease proteolytic subunit [Citrobacter sp. A1]
gi|402277743|gb|EJU26811.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Klebsiella sp. OBRC7]
gi|411775444|gb|EKS58890.1| hypothetical protein D186_01745 [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|422894786|gb|EKU34593.1| atp-dependent clp protease proteolytic subunit [Citrobacter sp.
L17]
gi|440048273|gb|AGB79331.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Enterobacteriaceae bacterium strain FGI 57]
gi|455641803|gb|EMF20974.1| hypothetical protein H262_21028 [Citrobacter freundii GTC 09479]
Length = 207
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 152 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSASEAVEYGLVDSIL 203
>gi|291548434|emb|CBL21542.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruminococcus
sp. SR1/5]
Length = 193
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/180 (61%), Positives = 143/180 (79%), Gaps = 2/180 (1%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D AN+IVAQLL+L+A DP+KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKDRIIFLGEEVNDVSANLIVAQLLFLEAEDPSKDIQLYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+ DVST+C+G+AASMGAFLLS+G KGKRY+LPNS IMIHQP GGAQG ++
Sbjct: 76 AIYDTMQYIKCDVSTICLGMAASMGAFLLSSGAKGKRYALPNSTIMIHQPSGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I + A+++ K LN LS +TGQ LE + +DTDRD +M+AEEAK YGLIDGVV+ HK
Sbjct: 136 IQIVADQIAKTKKKLNEILSANTGQPLEIVEKDTDRDNYMTAEEAKAYGLIDGVVI--HK 193
>gi|212709197|ref|ZP_03317325.1| hypothetical protein PROVALCAL_00230 [Providencia alcalifaciens DSM
30120]
gi|422019641|ref|ZP_16366184.1| ATP-dependent Clp protease proteolytic subunit [Providencia
alcalifaciens Dmel2]
gi|212688109|gb|EEB47637.1| hypothetical protein PROVALCAL_00230 [Providencia alcalifaciens DSM
30120]
gi|414102747|gb|EKT64337.1| ATP-dependent Clp protease proteolytic subunit [Providencia
alcalifaciens Dmel2]
Length = 206
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 141/174 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIQLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AGTKGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++ A E+L K+ +N ++ HTG+++E+I+ DT+RD F+SA EAK+YGL+D +
Sbjct: 149 IEIHAQEILKVKSRMNELMAQHTGKSIEEISRDTERDRFLSANEAKEYGLVDHI 202
>gi|376003777|ref|ZP_09781580.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|423066153|ref|ZP_17054943.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis C1]
gi|375327808|emb|CCE17333.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|406712195|gb|EKD07384.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis C1]
Length = 198
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/203 (56%), Positives = 150/203 (73%), Gaps = 17/203 (8%)
Query: 86 VPSSPY-IP--TYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQ 142
VPS PY +P TY Q + ++ +LF+ RII V+D +AN IVA
Sbjct: 5 VPSVPYRLPGSTYEQ--------------WISIYERLFRERIIFLSEEVDDGIANAIVAY 50
Query: 143 LLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAG 202
+LYLD+ DP+K I +Y+NSPGGSVTAGMAI+DT+++IR DV T+CVG+AASMGAFLL+AG
Sbjct: 51 MLYLDSEDPSKPIYLYINSPGGSVTAGMAIYDTMQYIRSDVVTICVGMAASMGAFLLAAG 110
Query: 203 TKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINE 262
TKGKR +LP++RIMIHQPLGG +G +DI+++A E+L + LN L+ +GQTLEKI +
Sbjct: 111 TKGKRLALPHARIMIHQPLGGTRGQATDIEIEAKEILRIRKVLNEMLAERSGQTLEKIEK 170
Query: 263 DTDRDFFMSAEEAKDYGLIDGVV 285
DTDRD+FMSA EA +YGLID V+
Sbjct: 171 DTDRDYFMSAAEAHEYGLIDQVI 193
>gi|21230439|ref|NP_636356.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66769567|ref|YP_244329.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. campestris str. 8004]
gi|25008306|sp|Q8PBY6.1|CLPP_XANCP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|81304478|sp|Q4URL4.1|CLPP_XANC8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|21112001|gb|AAM40280.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66574899|gb|AAY50309.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. campestris str. 8004]
Length = 208
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/185 (57%), Positives = 144/185 (77%), Gaps = 1/185 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GP++D MAN+IVAQLL+L+A +P KDI +Y+NSPGG VTAGM
Sbjct: 23 RAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGM 82
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG AASMGA LL++G GKRY+LPNSR+MIHQPLGG QG +D
Sbjct: 83 AIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATD 142
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV-MNPH 289
ID+ A E+L ++ LN L+ HTGQ+LE I DT+RD F SA +A+ YGL+D V+ P
Sbjct: 143 IDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFKSAVDAQAYGLVDHVLERRPE 202
Query: 290 KILQP 294
+ +QP
Sbjct: 203 ESIQP 207
>gi|437919283|ref|ZP_20850674.1| ATP-dependent Clp protease proteolytic subunit, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str.
6.0562-1]
gi|435313922|gb|ELO87441.1| ATP-dependent Clp protease proteolytic subunit, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str.
6.0562-1]
Length = 220
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 45 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 104
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 105 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 164
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 165 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 216
>gi|389815589|ref|ZP_10206852.1| ATP-dependent Clp protease proteolytic subunit [Planococcus
antarcticus DSM 14505]
gi|388465795|gb|EIM08109.1| ATP-dependent Clp protease proteolytic subunit [Planococcus
antarcticus DSM 14505]
Length = 203
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G ++D++AN IVAQLL+L+A DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRVIMLGSGIDDNVANSIVAQLLFLEAEDPDKDISIYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ IRPDV T+C+G+AASMGAFLL+AGTKGKR +LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTMQFIRPDVQTICIGMAASMGAFLLAAGTKGKRLALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +LH + LN LS TGQ ++ I++DTDRD FM+AE A +YGLID V+
Sbjct: 136 IEIAAKRILHLREKLNQILSERTGQPIDVISKDTDRDNFMTAERALEYGLIDQVI 190
>gi|94310823|ref|YP_584033.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus
metallidurans CH34]
gi|430810194|ref|ZP_19437309.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus sp.
HMR-1]
gi|116243154|sp|Q1LM62.1|CLPP_RALME RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|93354675|gb|ABF08764.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Cupriavidus metallidurans CH34]
gi|429497428|gb|EKZ95961.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus sp.
HMR-1]
Length = 216
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 149/192 (77%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
QG G PM++ GR + ++ S+L + R++ G V D AN++VAQLL+L++ +P+K
Sbjct: 21 QGLGLVPMVVEQSGRGERAYDIYSRLLKERVVFMVGEVNDQTANLVVAQLLFLESENPDK 80
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
D+ +Y+NSPGGSV+AG+AI+DT++ I+PDV T+C+G+AASMGAFLL+AG KGKR +LPNS
Sbjct: 81 DVSLYINSPGGSVSAGLAIYDTMQFIKPDVQTLCMGMAASMGAFLLAAGAKGKRSALPNS 140
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
RIMIHQPLGGA+G SDI++QA E+L+ + LN LS TGQ +EKI DTDRD FMS +
Sbjct: 141 RIMIHQPLGGARGQASDIEIQAREILYLRERLNSILSEVTGQPVEKIARDTDRDNFMSGD 200
Query: 274 EAKDYGLIDGVV 285
+A DYGLID V+
Sbjct: 201 QAVDYGLIDKVI 212
>gi|381405442|ref|ZP_09930126.1| ClpP [Pantoea sp. Sc1]
gi|380738641|gb|EIB99704.1| ClpP [Pantoea sp. Sc1]
Length = 207
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AGTKGKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 89 SIYDTMKFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L K +N ++ HTG++LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 149 IEIHAREILKVKQRMNELMAEHTGKSLEEIERDTERDRFLSASEAVEYGLVDSIL 203
>gi|228474429|ref|ZP_04059164.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis SK119]
gi|314936932|ref|ZP_07844279.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis subsp. hominis C80]
gi|418619476|ref|ZP_13182304.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis VCU122]
gi|228271788|gb|EEK13135.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis SK119]
gi|313655551|gb|EFS19296.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis subsp. hominis C80]
gi|374824522|gb|EHR88480.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis VCU122]
Length = 195
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/181 (57%), Positives = 142/181 (78%), Gaps = 1/181 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AGTKGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGTKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ AN +L + LN L+ TGQ +E I +DTDRD F++A+EAK+YGLID VM P
Sbjct: 136 IEIAANHILKTREKLNRILAERTGQNIETIQKDTDRDNFLTADEAKEYGLIDH-VMQPED 194
Query: 291 I 291
+
Sbjct: 195 M 195
>gi|224824981|ref|ZP_03698087.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pseudogulbenkiania ferrooxidans 2002]
gi|347540404|ref|YP_004847829.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pseudogulbenkiania sp. NH8B]
gi|224602652|gb|EEG08829.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pseudogulbenkiania ferrooxidans 2002]
gi|345643582|dbj|BAK77415.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pseudogulbenkiania sp. NH8B]
Length = 207
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ GPV D+ AN++VAQ+L+L++ +P+KDI Y+NSPGGSV+AGM
Sbjct: 25 RAYDIYSRLLKERIVFLVGPVTDESANLVVAQMLFLESENPDKDIYFYINSPGGSVSAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+IFDT+ I+PDVST+C+G AASMGAFLLSAG KGKR++LPNSRIMIHQPLGG QG SD
Sbjct: 85 SIFDTMNFIKPDVSTLCIGQAASMGAFLLSAGAKGKRFALPNSRIMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
++ A +L+ K LN L+ HTG+++E+I DTDRD FMS+EEA YGLID ++
Sbjct: 145 FEIHAKNILYMKRRLNELLALHTGRSIEEIERDTDRDNFMSSEEALAYGLIDKML 199
>gi|238026973|ref|YP_002911204.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia glumae
BGR1]
gi|237876167|gb|ACR28500.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia glumae
BGR1]
Length = 217
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 143/174 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AG+
Sbjct: 39 RSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGL 98
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C+GLAASMGAFLLS+G KGKRY+LPN+R+MIHQPLGGA+G SD
Sbjct: 99 AIYDTMQFIKPDVSTLCMGLAASMGAFLLSSGAKGKRYALPNARVMIHQPLGGARGQASD 158
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++QA E+L+ + LN L+ +TGQ +E+I DTDRD FMS+++AK YGLID V
Sbjct: 159 IEIQAREILYLRERLNKILAENTGQDVERIARDTDRDNFMSSDDAKAYGLIDHV 212
>gi|114152202|sp|Q2L256.2|CLPP_BORA1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 201
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/195 (57%), Positives = 146/195 (74%), Gaps = 7/195 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
YIP + + G G R ++ S+L + R+I GPV D AN++VAQLL+L++ +
Sbjct: 8 YIPMVVE-QSGRGE------RAYDIYSRLLRERLIFLVGPVNDATANLVVAQLLFLESEN 60
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P+KDI Y+NSPGGSV AGMAIFDT++ ++PDVST+C GLAASMGAFLL+AG KGKR+SL
Sbjct: 61 PDKDISFYINSPGGSVYAGMAIFDTMQFVKPDVSTLCTGLAASMGAFLLAAGKKGKRFSL 120
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
PNSRIMIHQP GGAQG SDI +QA E+L + LN L+ +TGQ++E+I DT+RD FM
Sbjct: 121 PNSRIMIHQPSGGAQGQASDIQIQAKEILDLRERLNRILAENTGQSMERIAIDTERDTFM 180
Query: 271 SAEEAKDYGLIDGVV 285
SAE+A YGL+D V+
Sbjct: 181 SAEDALSYGLVDKVL 195
>gi|114321437|ref|YP_743120.1| ATP-dependent Clp protease proteolytic subunit [Alkalilimnicola
ehrlichii MLHE-1]
gi|122311052|sp|Q0A6A7.1|CLPP_ALHEH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114227831|gb|ABI57630.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Alkalilimnicola ehrlichii MLHE-1]
Length = 214
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 105/183 (57%), Positives = 143/183 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPVED MAN+IVAQLL+L++ +P+KDI +Y+NSPGG+VTAG+
Sbjct: 31 RAYDIYSRLLKERVIFLVGPVEDHMANLIVAQLLFLESENPDKDIHIYINSPGGAVTAGL 90
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVSTVC+G AASMGA LL+ GTKGKRY+LPNSR+MIHQPLGG QG +D
Sbjct: 91 AIYDTMQFIKPDVSTVCIGQAASMGALLLTGGTKGKRYALPNSRMMIHQPLGGFQGQATD 150
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
+D+ A E+L + LN +++HTGQ +E I DTDRD FMS + A +YGL+D V+ +
Sbjct: 151 VDIHAREILDMRDRLNRIMAHHTGQDMETIARDTDRDNFMSPDTACEYGLVDAVLADRKA 210
Query: 291 ILQ 293
+ Q
Sbjct: 211 LDQ 213
>gi|323488686|ref|ZP_08093928.1| ATP-dependent Clp protease proteolytic subunit [Planococcus
donghaensis MPA1U2]
gi|323397704|gb|EGA90508.1| ATP-dependent Clp protease proteolytic subunit [Planococcus
donghaensis MPA1U2]
Length = 203
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G ++D++AN IVAQLL+L+A DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRVIMLGSAIDDNVANSIVAQLLFLEAEDPDKDISIYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ IRPDV T+C+G+AASMGAFLL+AGTKGKR +LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTMQFIRPDVQTICIGMAASMGAFLLAAGTKGKRLALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +LH + LN LS TGQ ++ I +DTDRD FM+AE A +YGLID V+
Sbjct: 136 IEIAAKRILHLREKLNQILSERTGQPIDVIAKDTDRDNFMTAERALEYGLIDQVI 190
>gi|402298633|ref|ZP_10818309.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
alcalophilus ATCC 27647]
gi|401726173|gb|EJS99417.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
alcalophilus ATCC 27647]
Length = 193
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IVAQLL+L+A DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIMLGSAIDDNVANSIVAQLLFLNAEDPDKDISLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+P VST+C+G+AASMGAFLLSAG KGKRY+LPNS +MIHQPLGG +G +D
Sbjct: 76 AIYDTMNFIKPKVSTICIGMAASMGAFLLSAGEKGKRYALPNSEVMIHQPLGGTRGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ +L + LN L+ TGQ LE I DTDRD FM+AE+AK+YGLID ++
Sbjct: 136 IEIHTRRILEMRQTLNEILAERTGQPLEVIERDTDRDNFMTAEKAKEYGLIDDII 190
>gi|329894939|ref|ZP_08270738.1| ATP-dependent Clp protease proteolytic subunit [gamma
proteobacterium IMCC3088]
gi|328922668|gb|EGG30003.1| ATP-dependent Clp protease proteolytic subunit [gamma
proteobacterium IMCC3088]
Length = 200
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L++ +P+KDI +Y+NSPGGSVTAG+
Sbjct: 22 RSYDIYSRLLKERVIFVVGQVEDHMANLIVAQLLFLESENPDKDIHLYINSPGGSVTAGL 81
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDV+T C+G AASMGAFLLSAG KGKRY LPN+R MIHQP GGAQG +D
Sbjct: 82 AIYDTMKFIKPDVTTTCMGQAASMGAFLLSAGAKGKRYCLPNARTMIHQPSGGAQGQATD 141
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
ID+QA E+L + LN ++ HTGQ ++ I DT+RD FM+AE++K+YGL+D VV
Sbjct: 142 IDIQAKEILIIRERLNRLMAEHTGQPIDVIERDTERDRFMNAEQSKEYGLVDEVV 196
>gi|254432163|ref|ZP_05045866.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
gi|197626616|gb|EDY39175.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
Length = 196
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/182 (61%), Positives = 139/182 (76%), Gaps = 2/182 (1%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RI+ G PV + AN IVAQLL+L+A DP KDI +Y+NSPGGSV G+ IF
Sbjct: 17 DIYSRLLRERIVFLGEPVTAESANRIVAQLLFLEAEDPEKDIFLYINSPGGSVYDGLGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HI+PDV TVCVGLAASMGAFLL AGTKGKR SL +SRIMIHQPLGGA+G SDI +
Sbjct: 77 DTMQHIKPDVQTVCVGLAASMGAFLLCAGTKGKRSSLTHSRIMIHQPLGGARGQASDIRI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQ 293
QA+E+L+ K LN L+ TGQ + +I EDTDRDFFMS EA YGLID V+ + ++
Sbjct: 137 QADEILYLKQKLNQELADRTGQPMTRIEEDTDRDFFMSPAEAMAYGLIDKVI--EKRAVR 194
Query: 294 PV 295
PV
Sbjct: 195 PV 196
>gi|170077811|ref|YP_001734449.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
PCC 7002]
gi|169885480|gb|ACA99193.1| Clp protease [Synechococcus sp. PCC 7002]
Length = 199
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/174 (61%), Positives = 142/174 (81%), Gaps = 2/174 (1%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
N+ +L++ RII G V D +AN I+A +LYLD+ DP+K I +Y+NSPGGSVTAG+AI+
Sbjct: 22 NIYDRLYRERIIFLGRGVNDALANQIIAIMLYLDSEDPSKPIYLYINSPGGSVTAGLAIY 81
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQ--SDI 231
DT++HI+ +V T+CVGLAASMGAFLLSAGTKGKR +LP+SRIMIHQPLGG QG + +DI
Sbjct: 82 DTMKHIKSEVVTICVGLAASMGAFLLSAGTKGKRLALPHSRIMIHQPLGGIQGRRQATDI 141
Query: 232 DLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
D++A E++ K LN ++ HTGQ++EKI +DTDRD+FMSA+EA +YGLID V+
Sbjct: 142 DIEAKEIIRIKHQLNELMAAHTGQSIEKIEKDTDRDYFMSAQEALEYGLIDKVI 195
>gi|308050308|ref|YP_003913874.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ferrimonas
balearica DSM 9799]
gi|307632498|gb|ADN76800.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ferrimonas
balearica DSM 9799]
Length = 207
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/202 (55%), Positives = 146/202 (72%), Gaps = 7/202 (3%)
Query: 84 LEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQL 143
L+ P + IP + G R ++ S+L + R+I GPVED MAN++VAQL
Sbjct: 5 LDSPLNALIPMVVEQTAKGE-------RSYDIYSRLLKERVIFLTGPVEDHMANLVVAQL 57
Query: 144 LYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGT 203
L+L++ +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+PDVSTVC+G AASMGAFLL+ G
Sbjct: 58 LFLESENPDKDIYLYINSPGGSVTAGMSIYDTMQFIKPDVSTVCMGQAASMGAFLLAGGA 117
Query: 204 KGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINED 263
KGKR+ LPNSR+MIHQPLGG QG SDI + A E+L K LN L+ HTGQ +E I D
Sbjct: 118 KGKRHVLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKHKLNLLLAEHTGQPMEVIERD 177
Query: 264 TDRDFFMSAEEAKDYGLIDGVV 285
TDRD FMSA +A +YGL+D V+
Sbjct: 178 TDRDNFMSATDAVEYGLVDSVL 199
>gi|238788008|ref|ZP_04631804.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
frederiksenii ATCC 33641]
gi|238723956|gb|EEQ15600.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
frederiksenii ATCC 33641]
Length = 194
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 139/174 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+I AQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 16 RSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 76 SIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++ A E+L K+ +N +++HTG++LE+I DT+RD F+SAE+A +YGL+D V
Sbjct: 136 IEIHAKEILKVKSRMNELMAHHTGKSLEEIERDTERDRFLSAEQAVEYGLVDSV 189
>gi|146310565|ref|YP_001175639.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter sp.
638]
gi|145317441|gb|ABP59588.1| ATP-dependent Clp protease proteolytic subunit ClpP [Enterobacter
sp. 638]
Length = 207
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 152 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSASEAVEYGLVDSIL 203
>gi|378951824|ref|YP_005209312.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens F113]
gi|359761838|gb|AEV63917.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens F113]
Length = 190
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPVED MAN+I AQLL+L+A +P+KDI +Y+NSPGGSVTAGM
Sbjct: 11 RAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHLYINSPGGSVTAGM 70
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+P+VST C+G A SMGAFLL+AG GKRY LPNSR+MIHQPLGG QG SD
Sbjct: 71 SIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAHGKRYCLPNSRVMIHQPLGGFQGQASD 130
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L + LN ++ H+G+TLE+I DT+RD FMSAE A++YGLID V+
Sbjct: 131 IEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEAAREYGLIDEVI 185
>gi|291085757|ref|ZP_06571180.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Citrobacter
youngae ATCC 29220]
gi|291069764|gb|EFE07873.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Citrobacter
youngae ATCC 29220]
Length = 243
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 68 DIYSRLLKERVIFMTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 127
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 128 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 187
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 188 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSASEAVEYGLVDSIL 239
>gi|404399557|ref|ZP_10991141.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fuscovaginae UPB0736]
Length = 211
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/201 (54%), Positives = 149/201 (74%), Gaps = 6/201 (2%)
Query: 91 YIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
YI + + GG PM++ R ++ S+L + R+I GPVED MAN+I AQLL
Sbjct: 6 YIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLL 65
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L+A +P+KDI +Y+NSPGGSVTAGM+I+DT++ I+P+VST C+G A SMGAFLL+AG +
Sbjct: 66 FLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAE 125
Query: 205 GKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDT 264
GKR+ LPNSR+MIHQPLGG QG SDI++ A E+L + LN ++ H+G+TLE+I DT
Sbjct: 126 GKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDT 185
Query: 265 DRDFFMSAEEAKDYGLIDGVV 285
+RD FMSA A++YGLID V+
Sbjct: 186 NRDNFMSATAAREYGLIDEVI 206
>gi|420401918|ref|ZP_14901109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY6081]
gi|393017737|gb|EJB18889.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori CPY6081]
Length = 195
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 143/180 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G + D +A+ IVAQLL+L+A DP KDI +Y+NSPGG +T+G+
Sbjct: 16 RSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ IRPDVST+C+G AASMGAFLLS G KGKR+SLP+SRIMIHQPLGGAQG SD
Sbjct: 76 SIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ +NE+L K +N L+ ++GQ+LE+I +DTDRDF+MSA+EAK+YGLID V+ K
Sbjct: 136 IEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDEVLQKNVK 195
>gi|350552166|ref|ZP_08921372.1| ATP-dependent Clp protease proteolytic subunit [Thiorhodospira
sibirica ATCC 700588]
gi|349795031|gb|EGZ48837.1| ATP-dependent Clp protease proteolytic subunit [Thiorhodospira
sibirica ATCC 700588]
Length = 214
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R++ GPVED MAN+IVAQLL+L++ +P+KDI +Y+NSPGG+VTAG+
Sbjct: 29 RAYDIYSRLLKERVVFAVGPVEDHMANLIVAQLLFLESENPDKDISLYINSPGGAVTAGL 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C+G AASMGA LLS G KGKRY L +SR+MIHQPLGG QG SD
Sbjct: 89 AIYDTMQFIKPDVSTLCIGQAASMGAVLLSGGAKGKRYCLAHSRVMIHQPLGGFQGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
ID+ A E+L +A LN L+ H+GQ++E+I DTDRD FMS ++A DYGLID ++
Sbjct: 149 IDIHAREILKIRAQLNEILAKHSGQSIERIENDTDRDRFMSPQDALDYGLIDQIL 203
>gi|348026429|ref|YP_004766234.1| ATP-dependent Clp protease proteolytic subunit [Megasphaera
elsdenii DSM 20460]
gi|341822483|emb|CCC73407.1| ATP-dependent Clp protease proteolytic subunit [Megasphaera
elsdenii DSM 20460]
Length = 201
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 143/178 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ GGP++D +AN I+AQLL+L+A +P+KDI +Y+NSPGG VTAGM
Sbjct: 18 RSYDIYSRLLKDRIVFLGGPIDDAVANSIIAQLLFLEAENPDKDIHLYINSPGGVVTAGM 77
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG AASM + LL+AG KGKR++LP+S++MIHQPLGG QG ++
Sbjct: 78 AIYDTMQYIKPDVSTICVGSAASMASVLLTAGAKGKRFALPHSQVMIHQPLGGVQGQATE 137
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
I++ A E+L + LNG LS HTGQ ++ I +DT+RD FM+AEEAK YGLID ++ P
Sbjct: 138 IEIHAREILRMRKELNGILSKHTGQPIDVIQKDTERDNFMTAEEAKAYGLIDEILTRP 195
>gi|269102129|ref|ZP_06154826.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268162027|gb|EEZ40523.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 207
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN++VAQLL+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIYLYINSPGGSVTAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+P+VSTVC+G A SMGAFLL+ G KGKRY LPNSR+MIHQPLGG QG SD
Sbjct: 89 SIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRVMIHQPLGGFQGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ HTGQ LE I DTDRD FMSA++A +YGL+D V+
Sbjct: 149 IQIHAQEILTIKQKLNNLLAEHTGQPLEVIERDTDRDNFMSADQAVEYGLVDAVL 203
>gi|206578475|ref|YP_002240083.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae 342]
gi|238893386|ref|YP_002918120.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|288936834|ref|YP_003440893.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
variicola At-22]
gi|290510110|ref|ZP_06549480.1| Clp protease [Klebsiella sp. 1_1_55]
gi|365138464|ref|ZP_09345148.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella sp.
4_1_44FAA]
gi|386033452|ref|YP_005953365.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae KCTC 2242]
gi|419973312|ref|ZP_14488737.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|419978496|ref|ZP_14493792.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|419983882|ref|ZP_14499031.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|419989934|ref|ZP_14504908.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|419995813|ref|ZP_14510618.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|420000724|ref|ZP_14515382.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|420007650|ref|ZP_14522143.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|420013285|ref|ZP_14527596.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|420018370|ref|ZP_14532567.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|420024461|ref|ZP_14538474.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|420030219|ref|ZP_14544046.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|420035322|ref|ZP_14548986.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|420041656|ref|ZP_14555152.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|420047717|ref|ZP_14561033.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|420053419|ref|ZP_14566597.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|420058263|ref|ZP_14571276.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|420064551|ref|ZP_14577360.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|420070362|ref|ZP_14583014.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|420076107|ref|ZP_14588580.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|420084374|ref|ZP_14596634.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|424829257|ref|ZP_18253985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae Ecl8]
gi|424934796|ref|ZP_18353168.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|425078088|ref|ZP_18481191.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|425080158|ref|ZP_18483255.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|425088721|ref|ZP_18491814.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|425090280|ref|ZP_18493365.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|428149078|ref|ZP_18996910.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428933610|ref|ZP_19007158.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae JHCK1]
gi|428939231|ref|ZP_19012344.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae VA360]
gi|449060067|ref|ZP_21737739.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae hvKP1]
gi|206567533|gb|ACI09309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Klebsiella
pneumoniae 342]
gi|238545702|dbj|BAH62053.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|288891543|gb|ADC59861.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Klebsiella
variicola At-22]
gi|289776826|gb|EFD84824.1| Clp protease [Klebsiella sp. 1_1_55]
gi|339760580|gb|AEJ96800.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae KCTC 2242]
gi|363654924|gb|EHL93797.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella sp.
4_1_44FAA]
gi|397348784|gb|EJJ41882.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|397351567|gb|EJJ44650.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|397354933|gb|EJJ47959.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|397366797|gb|EJJ59412.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|397368455|gb|EJJ61061.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|397372939|gb|EJJ65411.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|397380234|gb|EJJ72419.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|397384351|gb|EJJ76471.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|397390327|gb|EJJ82237.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|397399076|gb|EJJ90733.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|397402040|gb|EJJ93652.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|397408058|gb|EJJ99434.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|397416557|gb|EJK07730.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|397418193|gb|EJK09352.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|397424204|gb|EJK15111.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|397433257|gb|EJK23907.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|397437304|gb|EJK27873.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|397441744|gb|EJK32110.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|397447618|gb|EJK37808.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|397450260|gb|EJK40370.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|405591067|gb|EKB64580.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|405601813|gb|EKB74966.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|405607083|gb|EKB80053.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|405613964|gb|EKB86685.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|407808983|gb|EKF80234.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|414706676|emb|CCN28380.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae Ecl8]
gi|426304302|gb|EKV66449.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae VA360]
gi|426304864|gb|EKV66998.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae JHCK1]
gi|427540935|emb|CCM93048.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|448874275|gb|EMB09330.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae hvKP1]
Length = 207
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 152 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAAEAVEYGLVDSIL 203
>gi|187477999|ref|YP_786023.1| ATP-dependent Clp protease proteolytic subunit [Bordetella avium
197N]
gi|115422585|emb|CAJ49110.1| ATP-dependent Clp protease proteolytic subunit [Bordetella avium
197N]
Length = 217
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPV D AN++VAQLL+L++ +P+KDI Y+NSPGGSV AGM
Sbjct: 37 RAYDIYSRLLRERLIFLVGPVNDATANLVVAQLLFLESENPDKDISFYINSPGGSVYAGM 96
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT++ ++PDVST+C GLAASMGAFLL+AG KGKR+SLPNSRIMIHQP GGAQG SD
Sbjct: 97 AIFDTMQFVKPDVSTLCTGLAASMGAFLLAAGKKGKRFSLPNSRIMIHQPSGGAQGQASD 156
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I +QA E+L + LN L+ +TGQ++E+I DT+RD FMSAE+A YGL+D V+
Sbjct: 157 IQIQAKEILDLRERLNRILAENTGQSMERIAIDTERDTFMSAEDALSYGLVDKVL 211
>gi|238751006|ref|ZP_04612502.1| ATP-dependent Clp protease proteolytic subunit [Yersinia rohdei
ATCC 43380]
gi|238710696|gb|EEQ02918.1| ATP-dependent Clp protease proteolytic subunit [Yersinia rohdei
ATCC 43380]
Length = 207
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 139/174 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+I AQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++ A E+L K+ +N +++HTG++LE+I DT+RD F+SAE+A +YGL+D V
Sbjct: 149 IEIHAKEILKVKSRMNELMAHHTGKSLEEIERDTERDRFLSAEQAVEYGLVDSV 202
>gi|417324522|ref|ZP_12110764.1| ATP-dependent Clp protease proteolytic subunit, partial [Salmonella
enterica subsp. enterica serovar Adelaide str. A4-669]
gi|353578760|gb|EHC40499.1| ATP-dependent Clp protease proteolytic subunit, partial [Salmonella
enterica subsp. enterica serovar Adelaide str. A4-669]
Length = 216
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 41 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 100
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 101 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 160
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 161 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 212
>gi|390949050|ref|YP_006412809.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiocystis
violascens DSM 198]
gi|390425619|gb|AFL72684.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiocystis
violascens DSM 198]
Length = 214
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED M+N++VAQLL+L++ +P+KDI +Y+NSPGGSVTAG+AI+
Sbjct: 33 DIYSRLLKERVIFLVGQVEDHMSNLVVAQLLFLESENPDKDIHLYINSPGGSVTAGLAIY 92
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+R +RPDVST+C+G AASMGA LL+ G KGKRY LP+SR+MIHQPLGG QG +DID+
Sbjct: 93 DTMRFVRPDVSTMCIGQAASMGALLLAGGAKGKRYCLPHSRMMIHQPLGGFQGQATDIDI 152
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L+ + LN LS HTGQ +EKI EDT+RD FMS E A++YGLID V+
Sbjct: 153 HAREILYIRDKLNQILSEHTGQPIEKIAEDTERDRFMSGEVAQEYGLIDKVI 204
>gi|290969192|ref|ZP_06560717.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Megasphaera
genomosp. type_1 str. 28L]
gi|335049502|ref|ZP_08542492.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Megasphaera sp. UPII 199-6]
gi|290780698|gb|EFD93301.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Megasphaera
genomosp. type_1 str. 28L]
gi|333762762|gb|EGL40247.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Megasphaera sp. UPII 199-6]
Length = 200
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 149/202 (73%), Gaps = 7/202 (3%)
Query: 89 SPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDA 148
S Y+P + G R ++ S+L + RII G VED MAN ++AQLL+L+A
Sbjct: 2 SMYVPVVVEQTSQGE-------RSYDLYSRLMKDRIIFLSGQVEDTMANSLIAQLLFLEA 54
Query: 149 VDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRY 208
DP+KDI +Y+NSPGG VTAGMAI+DT+++I+PDVST+CVG AASM + LL+AGTKGKR+
Sbjct: 55 EDPDKDIYLYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGSAASMASVLLAAGTKGKRF 114
Query: 209 SLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDF 268
+LP+S++MIHQPLGG QG +DI++ E+L + LNG L+ HTGQ L+ I +DT+RD
Sbjct: 115 ALPHSQVMIHQPLGGVQGQATDIEIHTREILRVRRELNGILAAHTGQPLDVIEKDTERDN 174
Query: 269 FMSAEEAKDYGLIDGVVMNPHK 290
F++AE+AK YGLID +++ P +
Sbjct: 175 FLTAEDAKHYGLIDEILVRPQQ 196
>gi|384172971|ref|YP_005554348.1| ATP-dependent Clp protease proteolytic subunit [Arcobacter sp. L]
gi|345472581|dbj|BAK74031.1| ATP-dependent Clp protease proteolytic subunit [Arcobacter sp. L]
Length = 194
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 113/200 (56%), Positives = 146/200 (73%), Gaps = 8/200 (4%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
YIP Y + G G R ++ S+L + RII G + D +A+ +VAQLL+L+A D
Sbjct: 3 YIP-YVVEKTGRGE------RSYDIYSRLLKDRIIMLSGEINDAVASTVVAQLLFLEAED 55
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P+KDI +Y+NSPGG +T+GM+I+DT+ +I+PDV T+C+G AASMGAFLLS+GT+GKRYSL
Sbjct: 56 PDKDIYLYINSPGGVITSGMSIYDTMNYIKPDVCTICIGQAASMGAFLLSSGTRGKRYSL 115
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
PNSRIMIHQPLGGAQG +DI +QA E+ K LN ++ TGQ LE I +DTDRD FM
Sbjct: 116 PNSRIMIHQPLGGAQGQATDIQIQAKEIQRMKDTLNAMIAEQTGQPLEVIEKDTDRDNFM 175
Query: 271 SAEEAKDYGLIDGVVMNPHK 290
SAE+A YGLID V+ HK
Sbjct: 176 SAEQACAYGLIDEVIAK-HK 194
>gi|430375836|ref|ZP_19430239.1| ATP-dependent Clp protease proteolytic subunit [Moraxella macacae
0408225]
gi|429541067|gb|ELA09095.1| ATP-dependent Clp protease proteolytic subunit [Moraxella macacae
0408225]
Length = 213
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 137/172 (79%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I VED MAN+IVAQLL+L+A +P KDI +Y+NSPGG VTAGMAI+
Sbjct: 35 DIYSRLLRERVIFLTAEVEDHMANLIVAQLLFLEADNPEKDIHLYINSPGGVVTAGMAIY 94
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+ I+PDVST+C+G AASMGAFLLSAGTKGKRY+L NSR+MIHQPLGG +G SDI++
Sbjct: 95 DTMNFIKPDVSTICLGQAASMGAFLLSAGTKGKRYALKNSRVMIHQPLGGFRGQASDIEI 154
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L+ K LN ++ HTGQ EK+ +DTDRD F+SA+ AK YGL+D V+
Sbjct: 155 HAREILYLKEKLNRLIAEHTGQDYEKVAKDTDRDNFLSADAAKAYGLVDEVL 206
>gi|88808603|ref|ZP_01124113.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
gi|88787591|gb|EAR18748.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
Length = 196
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/172 (65%), Positives = 132/172 (76%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V + AN IVAQLL+L+A DP KDI +Y+NSPGGSV G+ IF
Sbjct: 17 DIYSRLLRERIIFLGEAVTSESANRIVAQLLFLEAEDPEKDIFLYINSPGGSVYDGLGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HI+PDV TVCVGLAASMGAFLL AG KGKR SL +SRIMIHQPLGGA+G SDI +
Sbjct: 77 DTMQHIKPDVQTVCVGLAASMGAFLLCAGAKGKRSSLRHSRIMIHQPLGGARGQASDIRI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA+E+L K LN L+ T Q LEKI EDTDRDFFMS EA DYGLID V+
Sbjct: 137 QADEILFLKNRLNQELAERTSQPLEKIQEDTDRDFFMSPHEAADYGLIDSVI 188
>gi|403669499|ref|ZP_10934703.1| ATP-dependent Clp protease proteolytic subunit [Kurthia sp. JC8E]
Length = 196
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 102/176 (57%), Positives = 141/176 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L+A DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RAYDIYSRLLKDRIIMLGSAIDDNVANAIVSQLLFLEAEDPEKDIYLYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDV T+C+G+AASMG+FLL+AGTKGKRY+LPNS IMIHQPLGGAQG ++
Sbjct: 76 AIYDTMQFIKPDVQTICIGMAASMGSFLLTAGTKGKRYALPNSEIMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVM 286
I++ A +L + LN L+ TGQ +E I +DTDRD +MSAE+A +YG+ID +++
Sbjct: 136 IEIAARHILKTREKLNRILAERTGQPIEVIEKDTDRDNYMSAEQALEYGIIDKIMV 191
>gi|212640342|ref|YP_002316862.1| ATP-dependent Clp protease proteolytic subunit [Anoxybacillus
flavithermus WK1]
gi|433447199|ref|ZP_20410832.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anoxybacillus
flavithermus TNO-09.006]
gi|226706440|sp|B7GL34.1|CLPP_ANOFW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|212561822|gb|ACJ34877.1| ATP-dependent Clp protease proteolytic subunit (class III
heat-shock protein) [Anoxybacillus flavithermus WK1]
gi|432000033|gb|ELK20939.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anoxybacillus
flavithermus TNO-09.006]
Length = 196
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +AN IV+QLL+L A DP KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIILGSPIDDHVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C+G+AASMGAFLL+AG KGKR++LPNS IMIHQPLGG QG ++
Sbjct: 76 AIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGVQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +L + LN LS +TGQ +E I DTDRD FM+AE+AK+YGLID V+
Sbjct: 136 IEIAAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAEKAKEYGLIDRVL 190
>gi|428224315|ref|YP_007108412.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
gi|427984216|gb|AFY65360.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
Length = 197
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/203 (55%), Positives = 151/203 (74%), Gaps = 17/203 (8%)
Query: 86 VPSSPY-IP--TYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQ 142
VP PY +P TY Q + ++ ++L++ RII G V+D++AN I+A
Sbjct: 5 VPKVPYRMPGETYTQ--------------WIDIYNRLYRERIIFLGRDVDDEIANQIIAV 50
Query: 143 LLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAG 202
+LYLD+ DP KDII+Y+NSPGG VTAGMAI+DT++H++ DV T+CVGLAASMG+FLL+AG
Sbjct: 51 MLYLDSEDPGKDIILYINSPGGMVTAGMAIYDTMQHVKSDVVTICVGLAASMGSFLLAAG 110
Query: 203 TKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINE 262
TKGKR +LP+SRIMIHQP GG +G +DI+++A E+L + LNG + +TGQ +EKI +
Sbjct: 111 TKGKRLALPHSRIMIHQPSGGTRGQATDIEIEAREILRIRQELNGIYAKNTGQPIEKIEK 170
Query: 263 DTDRDFFMSAEEAKDYGLIDGVV 285
D DRDFFMSA EAK+YGLID V+
Sbjct: 171 DMDRDFFMSAYEAKEYGLIDRVI 193
>gi|373457870|ref|ZP_09549637.1| ATP-dependent Clp protease proteolytic subunit [Caldithrix abyssi
DSM 13497]
gi|371719534|gb|EHO41305.1| ATP-dependent Clp protease proteolytic subunit [Caldithrix abyssi
DSM 13497]
Length = 206
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G P++D++A++I++QLL+L+A DP KDI +Y+NSPGG V++G+
Sbjct: 16 RAYDIYSRLLKERIVFLGTPIDDNVASLIISQLLFLEAEDPTKDIYLYINSPGGIVSSGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+R+I+PDV T C+G AASMGA LL+AG KGKRY+LP++RIMIHQPLGGA+G SD
Sbjct: 76 AIYDTMRYIKPDVVTTCMGQAASMGAVLLAAGAKGKRYALPHARIMIHQPLGGAEGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + ANE+L K LN L+ TG+ LEKI +DTDR+FFMSAEEA +YGLID V+
Sbjct: 136 IAIAANEILRIKKVLNQILADATGKPLEKIEQDTDRNFFMSAEEALEYGLIDKVL 190
>gi|329296782|ref|ZP_08254118.1| ClpP [Plautia stali symbiont]
Length = 207
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 149/208 (71%), Gaps = 7/208 (3%)
Query: 78 WSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMAN 137
+S + P++ +P + G R ++ S+L + R+I G VED MAN
Sbjct: 3 YSGDREFTAPTNALVPMVVEQTSRGE-------RSYDIYSRLLKERVIFLTGQVEDHMAN 55
Query: 138 IIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAF 197
+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DT++ I+PDVST+C+G A SMGAF
Sbjct: 56 LIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMKFIKPDVSTICMGQACSMGAF 115
Query: 198 LLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTL 257
LL+AGTKGKR+ LPNSR+MIHQPLGG QG +DI++ A E+L K +N ++ HTG++L
Sbjct: 116 LLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKQRMNELMAEHTGKSL 175
Query: 258 EKINEDTDRDFFMSAEEAKDYGLIDGVV 285
E+I DT+RD F+SA EA +YGL+D ++
Sbjct: 176 EQIERDTERDRFLSASEAVEYGLVDSIL 203
>gi|418799553|ref|ZP_13355219.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
gi|392763871|gb|EJA20677.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
Length = 243
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 68 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 127
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 128 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 187
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 188 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 239
>gi|319955770|ref|YP_004167033.1| ATP-dependent clp protease proteolytic subunit clpp [Nitratifractor
salsuginis DSM 16511]
gi|319418174|gb|ADV45284.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nitratifractor
salsuginis DSM 16511]
Length = 196
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/195 (55%), Positives = 147/195 (75%), Gaps = 7/195 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
YIP Y + G G R ++ S+L + RII G V D +A+ IVAQLL+L+A D
Sbjct: 3 YIP-YVIEQTGRGE------RSYDIYSRLLKDRIIMLSGEVNDAVASSIVAQLLFLEAQD 55
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P+KDI Y+NSPGG +T+G +I+DT+ +I+PDVST+C+G AASMGAFLL+ G +GKRY+L
Sbjct: 56 PDKDIYFYINSPGGVITSGFSIYDTMNYIKPDVSTICIGQAASMGAFLLACGAEGKRYAL 115
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
P+SRIMIHQPLGGAQG +DI +QA E+L K LN L+ TG++++KI +DT+RD+FM
Sbjct: 116 PSSRIMIHQPLGGAQGQATDIAIQAKEILRMKTYLNKILAEKTGKSVKKIEKDTERDYFM 175
Query: 271 SAEEAKDYGLIDGVV 285
SAEEA++YGLID V+
Sbjct: 176 SAEEAQEYGLIDKVL 190
>gi|254468869|ref|ZP_05082275.1| ATP-dependent Clp protease, proteolytic subunit ClpP [beta
proteobacterium KB13]
gi|207087679|gb|EDZ64962.1| ATP-dependent Clp protease, proteolytic subunit ClpP [beta
proteobacterium KB13]
Length = 207
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/195 (55%), Positives = 148/195 (75%), Gaps = 7/195 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
YIP + + G G R ++ S+L + R++ GPV+D AN++VAQLL+L+A +
Sbjct: 17 YIPMVVE-QSGRGE------RSYDIYSRLLKERVVFLVGPVDDMTANLVVAQLLFLEAEN 69
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P+KDI +Y+NSPGGSVTAGMAI+DT++ I+PDVST+C+G AASMGA LL+AG K KR+ L
Sbjct: 70 PDKDISLYINSPGGSVTAGMAIYDTMQFIKPDVSTLCIGQAASMGALLLTAGAKDKRFCL 129
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
PNSR+MIHQPLGG QG SDI++ A E+L+ K LN LS+HTGQ ++ I++DTDRD FM
Sbjct: 130 PNSRVMIHQPLGGFQGQASDIEIHAKEILYLKDKLNRILSHHTGQDIKTISKDTDRDNFM 189
Query: 271 SAEEAKDYGLIDGVV 285
S+E+A YGL+D V+
Sbjct: 190 SSEDAVKYGLVDKVI 204
>gi|337744565|ref|YP_004638727.1| protein ClpP1 [Paenibacillus mucilaginosus KNP414]
gi|379718194|ref|YP_005310325.1| protein ClpP1 [Paenibacillus mucilaginosus 3016]
gi|386720758|ref|YP_006187083.1| protein ClpP1 [Paenibacillus mucilaginosus K02]
gi|336295754|gb|AEI38857.1| ClpP1 [Paenibacillus mucilaginosus KNP414]
gi|378566866|gb|AFC27176.1| ClpP1 [Paenibacillus mucilaginosus 3016]
gi|384087882|gb|AFH59318.1| protein ClpP1 [Paenibacillus mucilaginosus K02]
Length = 193
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G + D +AN I+AQLL+L A DP+KDI +Y+NSPGGS+T+GM
Sbjct: 16 RAYDIYSRLLKDRIIFLGSGINDVVANSIIAQLLFLAASDPDKDIHLYINSPGGSITSGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+CVG+AASMGAFLL+AG GKR++LPNS +MIHQPLGGA+G SD
Sbjct: 76 AIYDTMQFIKPDVSTICVGMAASMGAFLLAAGAPGKRFALPNSEVMIHQPLGGAEGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I+++A +L + LN LS TGQ+ E+I +DTDRD FMSAEEA+ YGLID V+
Sbjct: 136 IEIRAKRILKMRDKLNTILSERTGQSFERIEKDTDRDNFMSAEEARAYGLIDKVI 190
>gi|312898487|ref|ZP_07757877.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Megasphaera
micronuciformis F0359]
gi|310620406|gb|EFQ03976.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Megasphaera
micronuciformis F0359]
Length = 202
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 143/178 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D +AN ++AQLL+L+A +P+KDI +Y+NSPGG VTAGM
Sbjct: 18 RSYDIYSRLLKDRIIFLTGAIDDTVANSVIAQLLFLEADNPDKDIHLYINSPGGVVTAGM 77
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+R+I+PDVST+CVG AASM + LL+AGTKGKR++LP+S++MIHQPLGG QG SD
Sbjct: 78 AIYDTMRYIKPDVSTICVGSAASMASVLLTAGTKGKRFALPHSQVMIHQPLGGVQGQASD 137
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
I++ A E+L + LNG L+ HTGQ ++ I +DT+RD FM+AEEAK YGL+D +++ P
Sbjct: 138 IEIHAREILRMRKELNGILATHTGQPVDVIEKDTERDNFMTAEEAKAYGLVDEILIRP 195
>gi|418511864|ref|ZP_13078112.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Pomona str. ATCC 10729]
gi|366084181|gb|EHN48092.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Pomona str. ATCC 10729]
Length = 207
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 152 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|423138926|ref|ZP_17126564.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. houtenae str. ATCC BAA-1581]
gi|160865722|gb|ABX22345.1| hypothetical protein SARI_02486 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
gi|379051480|gb|EHY69371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. houtenae str. ATCC BAA-1581]
Length = 243
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 68 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 127
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 128 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 187
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 188 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 239
>gi|146295915|ref|YP_001179686.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|166201809|sp|A4XHW0.1|CLPP_CALS8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|145409491|gb|ABP66495.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 195
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G + DD+A++IVAQLL+L+A DP+KDI +Y+NSPGGSVTAG
Sbjct: 17 RAYDIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPGGSVTAGF 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI++I+PDVST+CVG+AASMGAFLL+AG KGKR++LPNS IMIHQP+GG +G +D
Sbjct: 77 AIYDTIQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPIGGVRGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A +L K +N L+ TGQ +E I DT+RDFFM+AEEA YG+ID V+
Sbjct: 137 IKIHAEWILKIKQRINRILAERTGQPIEVIERDTERDFFMTAEEALKYGIIDKVI 191
>gi|89900346|ref|YP_522817.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodoferax
ferrireducens T118]
gi|89345083|gb|ABD69286.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodoferax
ferrireducens T118]
Length = 209
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/204 (53%), Positives = 152/204 (74%), Gaps = 6/204 (2%)
Query: 88 SSPYIPTYAQGEQGGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVA 141
S P + A Q G PM++ GR + ++ S+L + R+I GPV D +AN++VA
Sbjct: 2 SLPNMMMGAMQTQALGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDYVANLVVA 61
Query: 142 QLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSA 201
QLL+L++ +P+KDI Y+NSPGGSV+AGMAIFDT+ ++PDVST+C G+AASMGAFLL+A
Sbjct: 62 QLLFLESDNPDKDISFYINSPGGSVSAGMAIFDTMNFVKPDVSTLCTGMAASMGAFLLAA 121
Query: 202 GTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKIN 261
G KGKR+SLPNS++MIHQP GG+QG ++I++QA E+L + LN L+ TGQ L +I
Sbjct: 122 GAKGKRFSLPNSKVMIHQPSGGSQGQATEIEIQAREILKTREQLNKILAERTGQPLARIE 181
Query: 262 EDTDRDFFMSAEEAKDYGLIDGVV 285
DT+RD++MSA+E K+YGLID V+
Sbjct: 182 RDTERDYYMSADECKEYGLIDQVI 205
>gi|170078144|ref|YP_001734782.1| Clp protease [Synechococcus sp. PCC 7002]
gi|169885813|gb|ACA99526.1| Clp protease [Synechococcus sp. PCC 7002]
Length = 197
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 110/191 (57%), Positives = 145/191 (75%), Gaps = 6/191 (3%)
Query: 101 GGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKD 154
GG PM++ R ++ S+L + RI+ G ++D +A+ +VAQLL+LDA D +KD
Sbjct: 2 GGTVVPMVVEQSGMGERAFDIYSRLLRERIVFLGTAIDDTVADSVVAQLLFLDAEDADKD 61
Query: 155 IIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSR 214
I +Y+NSPGGSV AGMAI+DT++ IRP+V T+C G+AASMGAFLLS GTKGKR +LP+SR
Sbjct: 62 IQLYINSPGGSVYAGMAIYDTMQQIRPNVVTICYGIAASMGAFLLSGGTKGKRMALPSSR 121
Query: 215 IMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEE 274
IMIHQPLGGAQG DI++QA E+L+ K LN ++ HTGQ +K+ EDT+RDF+MSAEE
Sbjct: 122 IMIHQPLGGAQGQAVDIEIQAKEILYIKDKLNTLIADHTGQPFDKVAEDTERDFYMSAEE 181
Query: 275 AKDYGLIDGVV 285
A YGLID V+
Sbjct: 182 ACQYGLIDQVI 192
>gi|161615359|ref|YP_001589324.1| hypothetical protein SPAB_03130 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197263975|ref|ZP_03164049.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|198242637|ref|YP_002214402.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|200390046|ref|ZP_03216657.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205357179|ref|ZP_02345490.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|205359635|ref|ZP_02830941.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|224582286|ref|YP_002636084.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|375000176|ref|ZP_09724516.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Infantis str. SARB27]
gi|375113375|ref|ZP_09758545.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SCSA50]
gi|375117884|ref|ZP_09763051.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|378956164|ref|YP_005213651.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum/pullorum str.
RKS5078]
gi|417339754|ref|ZP_12121240.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
gi|417346821|ref|ZP_12126518.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gaminara str. A4-567]
gi|417356090|ref|ZP_12131735.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Give str. S5-487]
gi|417363848|ref|ZP_12136955.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
gi|417371361|ref|ZP_12141962.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Inverness str. R8-3668]
gi|417379165|ref|ZP_12147614.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Johannesburg str. S5-703]
gi|417388734|ref|ZP_12152775.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Minnesota str. A4-603]
gi|417451305|ref|ZP_12163046.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. S5-403]
gi|417504469|ref|ZP_12174140.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
gi|417525809|ref|ZP_12184553.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Urbana str. R8-2977]
gi|417537133|ref|ZP_12190097.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
gi|161364723|gb|ABX68491.1| hypothetical protein SPAB_03130 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197242230|gb|EDY24850.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|197937153|gb|ACH74486.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|199602491|gb|EDZ01037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205323485|gb|EDZ11324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|205344194|gb|EDZ30958.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|224466813|gb|ACN44643.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|322713521|gb|EFZ05092.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SCSA50]
gi|326622151|gb|EGE28496.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|353074864|gb|EHB40624.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Infantis str. SARB27]
gi|353578891|gb|EHC40596.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gaminara str. A4-567]
gi|353597181|gb|EHC53972.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Give str. S5-487]
gi|353599186|gb|EHC55426.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
gi|353608251|gb|EHC61882.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Inverness str. R8-3668]
gi|353618300|gb|EHC69016.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Johannesburg str. S5-703]
gi|353624600|gb|EHC73595.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Minnesota str. A4-603]
gi|353636599|gb|EHC82614.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. S5-403]
gi|353651589|gb|EHC93636.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
gi|353668979|gb|EHD06016.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
gi|353669715|gb|EHD06539.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Urbana str. R8-2977]
gi|357206775|gb|AET54821.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum/pullorum str.
RKS5078]
gi|357959981|gb|EHJ83999.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
Length = 243
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 68 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 127
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 128 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 187
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 188 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 239
>gi|319943618|ref|ZP_08017899.1| ATP-dependent Clp protease proteolytic subunit [Lautropia mirabilis
ATCC 51599]
gi|319742851|gb|EFV95257.1| ATP-dependent Clp protease proteolytic subunit [Lautropia mirabilis
ATCC 51599]
Length = 262
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 111/205 (54%), Positives = 151/205 (73%), Gaps = 7/205 (3%)
Query: 88 SSPYIP-TYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIV 140
+ P+ P AQ QG G P+++ R ++ S+L + R++ GPV D AN+ V
Sbjct: 43 TDPFAPQAVAQAPQGLGMVPIVIEQSGRGERAYDIYSRLLRERVVFLVGPVMDQSANLAV 102
Query: 141 AQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLS 200
AQ+LYL++ +P+KDI Y+NSPGGSV+AG+ IFDT++ ++PDVST+C+G AASMGAFLL+
Sbjct: 103 AQMLYLESENPDKDIHFYINSPGGSVSAGLGIFDTMQFVKPDVSTLCIGFAASMGAFLLA 162
Query: 201 AGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKI 260
AG KGKR+SLPNSRIMIHQP GGAQG SDI++ A E+++ + LN L+ TGQ LE+I
Sbjct: 163 AGAKGKRHSLPNSRIMIHQPSGGAQGQASDIEIHAKEIIYLRKRLNQILADRTGQPLERI 222
Query: 261 NEDTDRDFFMSAEEAKDYGLIDGVV 285
DT+RD FMSA+EA +YGLID V+
Sbjct: 223 ERDTERDNFMSADEALEYGLIDKVM 247
>gi|241764198|ref|ZP_04762232.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
delafieldii 2AN]
gi|241366475|gb|EER60979.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
delafieldii 2AN]
Length = 202
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 149/192 (77%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
QG G PM++ GR + ++ S+L + R+I G V D AN++VAQLL+L++ +P+K
Sbjct: 7 QGLGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLESENPDK 66
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI Y+NSPGGSVTAGM+I+DT++ I+PDVST+CVG AASMGAFLL+AG KGKR+SLPNS
Sbjct: 67 DISFYINSPGGSVTAGMSIYDTMQFIKPDVSTLCVGFAASMGAFLLAAGAKGKRFSLPNS 126
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
++MIHQ LGGA+G +DI++ A ++L K +N L+ TGQ LEK+ DT+RD+F++A+
Sbjct: 127 KVMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPLEKVKADTERDYFLTAD 186
Query: 274 EAKDYGLIDGVV 285
EAKDYG+ID V+
Sbjct: 187 EAKDYGIIDQVI 198
>gi|392304356|emb|CCI70719.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
Length = 196
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 105/178 (58%), Positives = 136/178 (76%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GP++DD+AN+++AQLL+L A DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKDRIIFLSGPIDDDVANLVIAQLLFLSAEDPEKDINLYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
I+DT++ I+PDVST+CVG+AASMG+ LL+AG GKRY+L NS +MIHQPLGG QG SD
Sbjct: 76 GIYDTMQFIKPDVSTICVGMAASMGSLLLTAGAPGKRYALTNSEVMIHQPLGGIQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
+ + A+ ++ +A LN TGQ LEKI DTDRDFFM AEEAK YG+ID V+ P
Sbjct: 136 MLIHADWIIKTRAKLNQIYVERTGQPLEKIERDTDRDFFMEAEEAKAYGIIDQVLSKP 193
>gi|381393570|ref|ZP_09919291.1| ATP-dependent Clp protease, protease subunit [Glaciecola punicea
DSM 14233 = ACAM 611]
gi|379330786|dbj|GAB54424.1| ATP-dependent Clp protease, protease subunit [Glaciecola punicea
DSM 14233 = ACAM 611]
Length = 207
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 109/206 (52%), Positives = 147/206 (71%), Gaps = 7/206 (3%)
Query: 80 IRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANII 139
+ N++ PS+ +P + G R ++ S+L + +I G VED MAN+I
Sbjct: 1 MNNNIFEPSNALVPMVIEQTARGE-------RSFDIYSRLLKENVIFLVGQVEDHMANLI 53
Query: 140 VAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLL 199
VAQ+L+L+A +P KDI +Y+NSPGGSVTAGMAI+DT+ I+P+VSTVC+G AASMGAFLL
Sbjct: 54 VAQMLFLEAENPEKDIFLYINSPGGSVTAGMAIYDTMNFIKPNVSTVCIGQAASMGAFLL 113
Query: 200 SAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEK 259
SAG KGKRY LPNSR+MIHQPLGG QG SD ++ A E+L K +N ++ HTGQ EK
Sbjct: 114 SAGEKGKRYVLPNSRVMIHQPLGGFQGQASDFEIHAKEILSIKEKMNRLMAQHTGQKYEK 173
Query: 260 INEDTDRDFFMSAEEAKDYGLIDGVV 285
+ +DTDRD F+ A++A DYGL+D ++
Sbjct: 174 VAKDTDRDNFLGAQQAVDYGLVDSIL 199
>gi|417331694|ref|ZP_12115851.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Alachua str. R6-377]
gi|353584568|gb|EHC44643.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Alachua str. R6-377]
Length = 194
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 19 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 78
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 79 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 138
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 139 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 190
>gi|110816466|sp|Q2NV79.2|CLPP_SODGM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 194
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+++L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 16 RSYDIFSRLLKERIIFMTGQVEDHMANLIVAQMMFLEAENPEKDIYLYINSPGGVITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 76 SIYDTMQFIKPDVSTFCMGQAASMGAFLLAAGAKGKRFCLPNSRVMIHQPLGGFQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ HTGQ LE I DT+RD F+SA EA DYGL+D V+
Sbjct: 136 IEIHAREILKVKARMNELMAKHTGQPLEVIERDTERDRFLSAPEAVDYGLVDSVL 190
>gi|194471774|ref|ZP_03077758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|205357584|ref|ZP_02571531.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|205358475|ref|ZP_02656494.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|205358901|ref|ZP_02665206.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|289827300|ref|ZP_06545983.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|374978474|ref|ZP_09719816.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|378960582|ref|YP_005218068.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. P-stx-12]
gi|383495256|ref|YP_005395945.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 798]
gi|386590381|ref|YP_006086781.1| ATP-dependent Clp protease proteolytic [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|417406175|ref|ZP_12157835.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Mississippi str. A4-633]
gi|417472928|ref|ZP_12168488.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Rubislaw str. A4-653]
gi|417516426|ref|ZP_12179332.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
gi|194458138|gb|EDX46977.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|197213461|gb|ACH50858.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|205331008|gb|EDZ17772.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|205334088|gb|EDZ20852.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|205340153|gb|EDZ26917.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|321226026|gb|EFX51077.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|353628150|gb|EHC76286.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Mississippi str. A4-633]
gi|353652681|gb|EHC94446.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Rubislaw str. A4-653]
gi|353654323|gb|EHC95627.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
gi|374354454|gb|AEZ46215.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. P-stx-12]
gi|380462077|gb|AFD57480.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 798]
gi|383797425|gb|AFH44507.1| ATP-dependent Clp protease proteolytic [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
Length = 243
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 68 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 127
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 128 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 187
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 188 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 239
>gi|227113465|ref|ZP_03827121.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
gi|253687443|ref|YP_003016633.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|403057519|ref|YP_006645736.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
carotovorum subsp. carotovorum PCC21]
gi|251754021|gb|ACT12097.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|402804845|gb|AFR02483.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
carotovorum subsp. carotovorum PCC21]
Length = 207
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 136/177 (76%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN++VAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERIIFLTGQVEDHMANLVVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRICLPNSRVMIHQPLGGFQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++ A E+L KA +N ++ HTGQ LE I DT+RD F+SA EA DYGL+D V N
Sbjct: 149 IEIHAKEILKVKAKMNELMAKHTGQPLEAIERDTERDRFLSASEAVDYGLVDSVFTN 205
>gi|297583414|ref|YP_003699194.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
selenitireducens MLS10]
gi|297141871|gb|ADH98628.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
selenitireducens MLS10]
Length = 197
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D++AN IVAQLL+L A DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIMLGTPIDDNVANSIVAQLLFLAADDPDKDISLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+P V T+C+G+AASMGAFLL+AG GKRY+LPNS +MIHQPLGGAQG SD
Sbjct: 76 AIYDTMQFIKPKVQTICIGMAASMGAFLLTAGEPGKRYALPNSEVMIHQPLGGAQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A ++ K LN L+ TGQ +E+I +DTDRD F+SA +AK+YGLID V+
Sbjct: 136 IEIHAKRIVEMKEKLNQILAERTGQDIEQIRKDTDRDNFLSAAQAKEYGLIDEVM 190
>gi|150020876|ref|YP_001306230.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
melanesiensis BI429]
gi|149793397|gb|ABR30845.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosipho
melanesiensis BI429]
Length = 202
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 104/186 (55%), Positives = 147/186 (79%), Gaps = 6/186 (3%)
Query: 106 PMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYL 159
PM++ GR++ ++ S+L + RI+ G ++D +AN+IVAQLL+L+A DP+KDI +Y+
Sbjct: 10 PMVVENTGRYERAYDIYSRLLKDRIVFLGSAIDDHVANLIVAQLLFLEAEDPDKDIQLYI 69
Query: 160 NSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQ 219
NSPGGSV+AG+AI+DT+++++ DV+T+C+G AASMGA LL+ GTKGKR+SLPNSRIMIHQ
Sbjct: 70 NSPGGSVSAGLAIYDTMQYVKCDVTTICIGQAASMGAVLLAGGTKGKRFSLPNSRIMIHQ 129
Query: 220 PLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYG 279
PLGGA+G D+++ E+L K +N LS HTGQ +E+I DTDRDFFM+ E+A +YG
Sbjct: 130 PLGGAEGPAKDVEIMTKELLRIKNKINEILSLHTGQPIERIERDTDRDFFMTPEDALEYG 189
Query: 280 LIDGVV 285
LID V+
Sbjct: 190 LIDKVI 195
>gi|354722308|ref|ZP_09036523.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter mori
LMG 25706]
Length = 207
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 138/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L KA +N ++ HTGQ LE+I DT+RD F+SA EA +YGL+D V+
Sbjct: 152 HAREILKVKARMNELMAQHTGQPLEQIERDTERDRFLSAPEAVEYGLVDSVL 203
>gi|16759428|ref|NP_455045.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. CT18]
gi|16763829|ref|NP_459444.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|29142800|ref|NP_806142.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|162139608|ref|YP_215477.2| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|168237562|ref|ZP_02662620.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|168261116|ref|ZP_02683089.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|168465541|ref|ZP_02699423.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|194443946|ref|YP_002039691.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194451357|ref|YP_002044483.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194734455|ref|YP_002113479.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|204930575|ref|ZP_03221505.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|207855928|ref|YP_002242579.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|213025962|ref|ZP_03340409.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
gi|213419494|ref|ZP_03352560.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
gi|213425858|ref|ZP_03358608.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
gi|213646005|ref|ZP_03376058.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
gi|213853068|ref|ZP_03382600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
gi|238911421|ref|ZP_04655258.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Tennessee str. CDC07-0191]
gi|339998420|ref|YP_004729303.1| ATP-dependent clp protease proteolytic subunit [Salmonella bongori
NCTC 12419]
gi|378443952|ref|YP_005231584.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|378448785|ref|YP_005236144.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|378698411|ref|YP_005180368.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|378983053|ref|YP_005246208.1| ATP-dependent Clp protease proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|378987850|ref|YP_005251014.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
gi|409248894|ref|YP_006884732.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|416424704|ref|ZP_11691885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|416432829|ref|ZP_11696434.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|416440099|ref|ZP_11700680.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|416444542|ref|ZP_11703775.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|416453748|ref|ZP_11709822.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|416458586|ref|ZP_11713105.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|416465622|ref|ZP_11716944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|416473280|ref|ZP_11719747.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|416484368|ref|ZP_11724164.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|416501557|ref|ZP_11732147.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|416510475|ref|ZP_11737073.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB31]
gi|416520600|ref|ZP_11740312.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. ATCC
BAA710]
gi|416526651|ref|ZP_11742556.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|416536139|ref|ZP_11748206.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|416542339|ref|ZP_11751509.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|416552363|ref|ZP_11757079.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 29N]
gi|416557282|ref|ZP_11759411.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 42N]
gi|416573530|ref|ZP_11767876.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
gi|416576687|ref|ZP_11769269.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|416583721|ref|ZP_11773477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|416595069|ref|ZP_11780883.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|416596606|ref|ZP_11781498.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|416605755|ref|ZP_11787187.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|416614720|ref|ZP_11792972.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|416623397|ref|ZP_11797372.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|416634045|ref|ZP_11802326.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|416639007|ref|ZP_11804306.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|416648501|ref|ZP_11809146.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|416653401|ref|ZP_11811845.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|416670923|ref|ZP_11820412.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|416673586|ref|ZP_11820909.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|416691334|ref|ZP_11826156.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|416706818|ref|ZP_11832007.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|416713232|ref|ZP_11836874.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|416719437|ref|ZP_11841293.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|416723573|ref|ZP_11844239.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|416734155|ref|ZP_11850810.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|416740075|ref|ZP_11854163.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|416745272|ref|ZP_11857204.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|416757171|ref|ZP_11863001.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|416764387|ref|ZP_11867991.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|416766796|ref|ZP_11869412.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|418485272|ref|ZP_13054256.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|418490798|ref|ZP_13057334.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035278]
gi|418493157|ref|ZP_13059625.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035318]
gi|418498099|ref|ZP_13064514.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035320]
gi|418504393|ref|ZP_13070751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035321]
gi|418507976|ref|ZP_13074284.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035327]
gi|418525614|ref|ZP_13091594.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008286]
gi|418763194|ref|ZP_13319318.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|418766728|ref|ZP_13322800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|418771899|ref|ZP_13327905.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|418774850|ref|ZP_13330811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|418781197|ref|ZP_13337082.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|418784659|ref|ZP_13340496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|418791369|ref|ZP_13347132.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|418793869|ref|ZP_13349595.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|418804741|ref|ZP_13360345.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
gi|418807601|ref|ZP_13363159.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|418812139|ref|ZP_13367663.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|418815498|ref|ZP_13370999.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21538]
gi|418821321|ref|ZP_13376746.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22425]
gi|418825219|ref|ZP_13380527.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22462]
gi|418831776|ref|ZP_13386726.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|418835778|ref|ZP_13390669.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|418838762|ref|ZP_13393604.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|418844394|ref|ZP_13399186.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|418848964|ref|ZP_13403699.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|418853324|ref|ZP_13408017.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|418860806|ref|ZP_13415381.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|418864289|ref|ZP_13418824.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|418866312|ref|ZP_13420775.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
gi|419727608|ref|ZP_14254576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41579]
gi|419733911|ref|ZP_14260806.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41563]
gi|419738879|ref|ZP_14265635.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41573]
gi|419743018|ref|ZP_14269686.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41566]
gi|419749564|ref|ZP_14276043.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41565]
gi|419788921|ref|ZP_14314604.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. Levine 1]
gi|419793963|ref|ZP_14319579.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. Levine 15]
gi|421357762|ref|ZP_15808070.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|421365243|ref|ZP_15815465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639016-6]
gi|421368981|ref|ZP_15819165.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
640631]
gi|421372429|ref|ZP_15822578.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-0424]
gi|421376040|ref|ZP_15826149.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|421380610|ref|ZP_15830672.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|421383974|ref|ZP_15834003.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|421392475|ref|ZP_15842432.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|421396008|ref|ZP_15845940.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|421398667|ref|ZP_15848572.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|421405151|ref|ZP_15854986.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|421407751|ref|ZP_15857558.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|421412093|ref|ZP_15861856.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-1427]
gi|421419440|ref|ZP_15869132.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|421423883|ref|ZP_15873534.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|421425637|ref|ZP_15875272.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|421429985|ref|ZP_15879579.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|421436812|ref|ZP_15886338.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|421439185|ref|ZP_15888676.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
6-18]
gi|421445860|ref|ZP_15895281.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|421451188|ref|ZP_15900554.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|421572546|ref|ZP_16018192.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|421577455|ref|ZP_16023043.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|421582044|ref|ZP_16027585.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00326]
gi|421584557|ref|ZP_16030065.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
gi|421884328|ref|ZP_16315543.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Senftenberg str. SS209]
gi|422024583|ref|ZP_16371060.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|422029606|ref|ZP_16375862.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|427545785|ref|ZP_18926371.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|427562133|ref|ZP_18931136.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|427580636|ref|ZP_18935958.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|427602844|ref|ZP_18940734.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|427627512|ref|ZP_18945644.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|427650793|ref|ZP_18950400.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|427659813|ref|ZP_18955354.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
gi|427664926|ref|ZP_18960100.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
gi|427698521|ref|ZP_18965034.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm5]
gi|436615597|ref|ZP_20514266.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22704]
gi|436797184|ref|ZP_20523130.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. CHS44]
gi|436810601|ref|ZP_20529639.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436813651|ref|ZP_20531839.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436831375|ref|ZP_20536043.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1594]
gi|436849785|ref|ZP_20540922.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1566]
gi|436856198|ref|ZP_20545303.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1580]
gi|436863183|ref|ZP_20549726.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1543]
gi|436871659|ref|ZP_20554833.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1441]
gi|436878810|ref|ZP_20559229.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436886925|ref|ZP_20563331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1558]
gi|436894408|ref|ZP_20567886.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1018]
gi|436904534|ref|ZP_20574551.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1010]
gi|436909989|ref|ZP_20576574.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436918242|ref|ZP_20581413.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0895]
gi|436925537|ref|ZP_20585969.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0899]
gi|436934282|ref|ZP_20590286.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1457]
gi|436941290|ref|ZP_20594850.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436949280|ref|ZP_20599294.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0968]
gi|436959668|ref|ZP_20603865.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1444]
gi|436975115|ref|ZP_20611391.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1445]
gi|436987194|ref|ZP_20615838.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1559]
gi|436999731|ref|ZP_20620304.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1565]
gi|437010049|ref|ZP_20624029.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437018154|ref|ZP_20626646.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437035561|ref|ZP_20633487.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0956]
gi|437046589|ref|ZP_20638405.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1455]
gi|437049340|ref|ZP_20639960.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1575]
gi|437056846|ref|ZP_20644214.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437065298|ref|ZP_20648983.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437078922|ref|ZP_20656416.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437081946|ref|ZP_20658021.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437089970|ref|ZP_20662542.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|437117164|ref|ZP_20669784.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|437122541|ref|ZP_20672383.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-16]
gi|437132642|ref|ZP_20678092.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-19]
gi|437137749|ref|ZP_20680544.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|437149062|ref|ZP_20687935.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|437151979|ref|ZP_20689650.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|437160927|ref|ZP_20695000.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE15-1]
gi|437172784|ref|ZP_20701307.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|437176839|ref|ZP_20703643.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|437188248|ref|ZP_20710252.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|437259709|ref|ZP_20717229.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_81-2490]
gi|437272720|ref|ZP_20724470.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|437274738|ref|ZP_20725430.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|437288358|ref|ZP_20730692.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|437307007|ref|ZP_20734649.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|437323566|ref|ZP_20739300.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|437338518|ref|ZP_20743723.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|437353359|ref|ZP_20747850.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22558]
gi|437456275|ref|ZP_20760394.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 40-18]
gi|437470002|ref|ZP_20765017.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|437485279|ref|ZP_20769391.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
gi|437499044|ref|ZP_20773853.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642046 4-7]
gi|437513523|ref|ZP_20777501.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
gi|437531377|ref|ZP_20780747.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|437554751|ref|ZP_20784523.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648900
1-16]
gi|437571697|ref|ZP_20788806.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
1-17]
gi|437602362|ref|ZP_20798369.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648902
6-8]
gi|437625360|ref|ZP_20805445.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648903
1-6]
gi|437632904|ref|ZP_20806597.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648904
3-6]
gi|437658474|ref|ZP_20811681.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 653049
13-19]
gi|437672066|ref|ZP_20816065.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 8-1]
gi|437694788|ref|ZP_20821863.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|437710351|ref|ZP_20826456.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 42-20]
gi|437726124|ref|ZP_20829929.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
16-16]
gi|437763921|ref|ZP_20834985.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 76-2651]
gi|437811612|ref|ZP_20841204.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|437833273|ref|ZP_20844621.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
gi|438047872|ref|ZP_20856088.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|438091449|ref|ZP_20860960.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|438105780|ref|ZP_20866398.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|438114455|ref|ZP_20870071.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|438147683|ref|ZP_20876176.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Pullorum str. ATCC
9120]
gi|440761974|ref|ZP_20941040.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
gi|440768721|ref|ZP_20947686.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|440772487|ref|ZP_20951391.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|445144197|ref|ZP_21386946.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str. SL1438]
gi|445150702|ref|ZP_21389848.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str. HWS51]
gi|445172332|ref|ZP_21396423.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE8a]
gi|445214950|ref|ZP_21401734.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 20037]
gi|445232595|ref|ZP_21406108.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE10]
gi|445246809|ref|ZP_21408349.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 436]
gi|445337409|ref|ZP_21415966.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 18569]
gi|445343522|ref|ZP_21416991.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 13-1]
gi|445354600|ref|ZP_21421499.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. PT23]
gi|449785023|ref|YP_002145429.2| ATP-dependent Clp protease proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|452121291|ref|YP_007471539.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
gi|60391923|sp|P0A1D7.1|CLPP_SALTY RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|60391924|sp|P0A1D8.1|CLPP_SALTI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|67460140|sp|Q57SB5.2|CLPP_SALCH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|226706468|sp|B5QTJ6.1|CLPP_SALEP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706469|sp|B4T9E3.1|CLPP_SALHS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706470|sp|B4SWU1.1|CLPP_SALNS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706472|sp|B4TMC6.1|CLPP_SALSV RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|25289858|pir||AC0558 ATP-dependent clp protease proteolytic chain [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|7594816|dbj|BAA94668.1| serine protease subunit [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|16418955|gb|AAL19403.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|16501719|emb|CAD08907.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi]
gi|29138432|gb|AAO70002.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|194402609|gb|ACF62831.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194409661|gb|ACF69880.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194709957|gb|ACF89178.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|195631923|gb|EDX50443.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|197289522|gb|EDY28885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|204320509|gb|EDZ05712.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|205350070|gb|EDZ36701.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|206707731|emb|CAR32016.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|261245731|emb|CBG23528.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|267992163|gb|ACY87048.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|301157059|emb|CBW16543.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|312911481|dbj|BAJ35455.1| ATP-dependent Clp protease proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|320084722|emb|CBY94513.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|322614726|gb|EFY11655.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322618832|gb|EFY15720.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322623539|gb|EFY20378.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322629162|gb|EFY25941.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322631883|gb|EFY28637.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322637380|gb|EFY34082.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322642065|gb|EFY38675.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322647884|gb|EFY44359.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322652562|gb|EFY48916.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322653276|gb|EFY49609.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322660575|gb|EFY56811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322664727|gb|EFY60920.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322669220|gb|EFY65370.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322670765|gb|EFY66898.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322678996|gb|EFY75051.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322682025|gb|EFY78050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322685146|gb|EFY81143.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323192960|gb|EFZ78183.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323196958|gb|EFZ82100.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323203943|gb|EFZ88960.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323214175|gb|EFZ98933.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323214501|gb|EFZ99252.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323223058|gb|EGA07401.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323227007|gb|EGA11188.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323230175|gb|EGA14295.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323233913|gb|EGA18002.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323238393|gb|EGA22451.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323244080|gb|EGA28089.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323246241|gb|EGA30224.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323251867|gb|EGA35730.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323257864|gb|EGA41543.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323261123|gb|EGA44715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323264947|gb|EGA48446.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323272510|gb|EGA55917.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|332987397|gb|AEF06380.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
gi|339511781|emb|CCC29490.1| ATP-dependent clp protease proteolytic subunit [Salmonella bongori
NCTC 12419]
gi|363549144|gb|EHL33501.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB31]
gi|363554589|gb|EHL38824.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. ATCC
BAA710]
gi|363557703|gb|EHL41908.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|363564589|gb|EHL48636.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 29N]
gi|363565245|gb|EHL49281.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|363571797|gb|EHL55701.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
gi|363578796|gb|EHL62598.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 42N]
gi|366056250|gb|EHN20576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|366065085|gb|EHN29280.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035278]
gi|366065332|gb|EHN29522.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035318]
gi|366071235|gb|EHN35335.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035321]
gi|366073876|gb|EHN37940.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035320]
gi|366080282|gb|EHN44254.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035327]
gi|366829495|gb|EHN56371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|372206383|gb|EHP19887.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008286]
gi|379986042|emb|CCF87816.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Senftenberg str. SS209]
gi|381299098|gb|EIC40172.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41563]
gi|381300719|gb|EIC41777.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41573]
gi|381301190|gb|EIC42246.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41579]
gi|381310720|gb|EIC51546.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41565]
gi|381312570|gb|EIC53367.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41566]
gi|392616053|gb|EIW98488.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. Levine 15]
gi|392616387|gb|EIW98820.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. Levine 1]
gi|392733474|gb|EIZ90676.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|392734438|gb|EIZ91620.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|392736739|gb|EIZ93901.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|392747924|gb|EJA04915.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|392750050|gb|EJA07026.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|392754190|gb|EJA11109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|392755458|gb|EJA12368.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|392763549|gb|EJA20356.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|392769770|gb|EJA26499.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
gi|392776879|gb|EJA33565.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|392778864|gb|EJA35535.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|392790916|gb|EJA47409.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22425]
gi|392791950|gb|EJA48418.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21538]
gi|392798673|gb|EJA54944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|392803053|gb|EJA59254.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|392814588|gb|EJA70539.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|392815214|gb|EJA71158.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|392816913|gb|EJA72832.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22462]
gi|392822311|gb|EJA78123.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|392826190|gb|EJA81923.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|392827372|gb|EJA83081.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|392831550|gb|EJA87183.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|392840222|gb|EJA95758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
gi|395980754|gb|EJH89977.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639016-6]
gi|395983276|gb|EJH92469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
640631]
gi|395989999|gb|EJH99131.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|396000079|gb|EJI09094.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-0424]
gi|396003267|gb|EJI12255.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|396003659|gb|EJI12646.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|396008036|gb|EJI16971.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|396011052|gb|EJI19963.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|396020536|gb|EJI29377.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|396024462|gb|EJI33248.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|396029683|gb|EJI38419.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|396030457|gb|EJI39191.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|396035580|gb|EJI44252.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|396035931|gb|EJI44602.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|396044341|gb|EJI52938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-1427]
gi|396052132|gb|EJI60640.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|396056908|gb|EJI65381.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|396057302|gb|EJI65774.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|396063943|gb|EJI72331.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|396064295|gb|EJI72682.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|396071391|gb|EJI79716.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
6-18]
gi|402515481|gb|EJW22895.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00326]
gi|402516043|gb|EJW23456.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|402516372|gb|EJW23783.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|402531075|gb|EJW38288.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
gi|414023307|gb|EKT06741.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|414023848|gb|EKT07262.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|414025324|gb|EKT08654.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|414037188|gb|EKT19972.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|414038658|gb|EKT21365.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|414042387|gb|EKT24925.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|414051734|gb|EKT33818.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|414053183|gb|EKT35195.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|414057649|gb|EKT39402.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
gi|414061847|gb|EKT43224.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
gi|414067321|gb|EKT47699.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm5]
gi|434938414|gb|ELL45392.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Pullorum str. ATCC
9120]
gi|434961256|gb|ELL54574.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. CHS44]
gi|434965093|gb|ELL58056.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434967686|gb|ELL60487.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22704]
gi|434975159|gb|ELL67469.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434982332|gb|ELL74155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1594]
gi|434988362|gb|ELL79961.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1566]
gi|434991631|gb|ELL83119.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1580]
gi|434997710|gb|ELL88949.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1543]
gi|435000874|gb|ELL91996.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1441]
gi|435007486|gb|ELL98339.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435011457|gb|ELM02177.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1558]
gi|435017056|gb|ELM07564.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1010]
gi|435018222|gb|ELM08697.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1018]
gi|435028362|gb|ELM18441.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435030974|gb|ELM20963.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0895]
gi|435039930|gb|ELM29699.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0899]
gi|435041422|gb|ELM31164.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1457]
gi|435045121|gb|ELM34766.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435050066|gb|ELM39571.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1445]
gi|435053978|gb|ELM43414.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0968]
gi|435054333|gb|ELM43768.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1444]
gi|435059775|gb|ELM49050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1559]
gi|435060272|gb|ELM49542.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1565]
gi|435066949|gb|ELM56020.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435074928|gb|ELM63751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0956]
gi|435078059|gb|ELM66803.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1455]
gi|435081746|gb|ELM70387.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435096364|gb|ELM84636.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435096878|gb|ELM85140.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1575]
gi|435099946|gb|ELM88137.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435101278|gb|ELM89432.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435111114|gb|ELM99019.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435113536|gb|ELN01382.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|435114988|gb|ELN02778.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|435122189|gb|ELN09711.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-19]
gi|435123367|gb|ELN10860.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-16]
gi|435130871|gb|ELN18099.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|435134383|gb|ELN21511.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|435143452|gb|ELN30318.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|435143861|gb|ELN30715.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|435146440|gb|ELN33233.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE15-1]
gi|435155564|gb|ELN42108.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|435156168|gb|ELN42670.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|435165097|gb|ELN51157.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_81-2490]
gi|435168052|gb|ELN53905.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|435175816|gb|ELN61219.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|435183758|gb|ELN68719.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|435186995|gb|ELN71808.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|435194617|gb|ELN79045.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|435195909|gb|ELN80265.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|435206982|gb|ELN90474.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 40-18]
gi|435212164|gb|ELN95189.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22558]
gi|435214887|gb|ELN97635.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|435216454|gb|ELN98929.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
gi|435223967|gb|ELO05951.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642046 4-7]
gi|435230160|gb|ELO11494.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
gi|435243443|gb|ELO23701.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|435243627|gb|ELO23884.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648900
1-16]
gi|435248150|gb|ELO28071.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
1-17]
gi|435253179|gb|ELO32667.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648903
1-6]
gi|435260050|gb|ELO39263.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648902
6-8]
gi|435270473|gb|ELO48969.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 653049
13-19]
gi|435278368|gb|ELO56239.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|435279708|gb|ELO57452.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 8-1]
gi|435282538|gb|ELO60153.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648904
3-6]
gi|435289124|gb|ELO66114.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 42-20]
gi|435292074|gb|ELO68863.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
16-16]
gi|435297966|gb|ELO74223.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|435302259|gb|ELO78234.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
gi|435308367|gb|ELO83330.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 76-2651]
gi|435315858|gb|ELO89078.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|435319476|gb|ELO92303.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|435321469|gb|ELO93884.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|435328854|gb|ELP00312.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|436416440|gb|ELP14346.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|436418436|gb|ELP16320.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|436424266|gb|ELP22049.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
gi|444847337|gb|ELX72487.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str. SL1438]
gi|444856539|gb|ELX81566.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str. HWS51]
gi|444859546|gb|ELX84490.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 20037]
gi|444860439|gb|ELX85354.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE8a]
gi|444862183|gb|ELX87043.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE10]
gi|444873409|gb|ELX97706.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 18569]
gi|444881326|gb|ELY05370.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 13-1]
gi|444887690|gb|ELY11383.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. PT23]
gi|444890253|gb|ELY13606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 436]
gi|451910295|gb|AGF82101.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
Length = 207
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 152 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|88800033|ref|ZP_01115603.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Reinekea
blandensis MED297]
gi|88777159|gb|EAR08364.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Reinekea
blandensis MED297]
Length = 209
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/192 (56%), Positives = 145/192 (75%), Gaps = 6/192 (3%)
Query: 102 GGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDI 155
GG PM++ R ++ S+L + +I G VED MAN++VAQLL+L++ +P+KDI
Sbjct: 17 GGLVPMVVEQTSRGERSFDIYSRLLKENVIFLVGQVEDYMANLVVAQLLFLESENPDKDI 76
Query: 156 IMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRI 215
+Y+NSPGGSVTAGMAI+DT++ I+PDVST+C+G AASMGA LL+ G KGKRY LPNSR+
Sbjct: 77 HLYINSPGGSVTAGMAIYDTMQFIKPDVSTMCIGQAASMGALLLTGGAKGKRYCLPNSRM 136
Query: 216 MIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEA 275
MIHQPLGG QG +DI++ A E+L K LN +++HTG+ LE + DTDRD FM+AE+A
Sbjct: 137 MIHQPLGGYQGQATDIEIHAREILEMKRRLNEIMAHHTGRPLEDVERDTDRDNFMTAEQA 196
Query: 276 KDYGLIDGVVMN 287
DYGL+D V+ N
Sbjct: 197 VDYGLVDQVITN 208
>gi|62126693|gb|AAX64396.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease,
heat shock protein F215 [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
Length = 246
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 71 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 130
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 131 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 190
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 191 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 242
>gi|268680774|ref|YP_003305205.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Sulfurospirillum deleyianum DSM 6946]
gi|268618805|gb|ACZ13170.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurospirillum deleyianum DSM 6946]
Length = 196
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 140/180 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G + D +A+ IVAQLL+L+A DP KDI +Y+NSPGG +T+G
Sbjct: 17 RSYDIYSRLLKDRIIMLSGEINDVVASSIVAQLLFLEAEDPEKDIYLYINSPGGVITSGF 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ +I+PD+ST+C+G AASMGAFLLSAGTKGKRY+LPN+RIMIHQPLGGAQG +D
Sbjct: 77 SIYDTMNYIKPDISTICIGQAASMGAFLLSAGTKGKRYALPNARIMIHQPLGGAQGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L K LN L+ + Q L KI +DT+RDFFMSAEE+ +YGLID V+ K
Sbjct: 137 IEIQAKEILRMKQVLNEILAKNCNQKLPKIIKDTERDFFMSAEESCEYGLIDKVLNKSFK 196
>gi|359411825|ref|ZP_09204290.1| ATP-dependent Clp protease proteolytic subunit [Clostridium sp.
DL-VIII]
gi|357170709|gb|EHI98883.1| ATP-dependent Clp protease proteolytic subunit [Clostridium sp.
DL-VIII]
Length = 199
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/181 (58%), Positives = 139/181 (76%), Gaps = 1/181 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V DD AN+IVAQLL+L++ DP+KDI +Y+NSPGGS+TAG
Sbjct: 16 RSYDIFSRLLKERIIMLSGEVNDDSANLIVAQLLFLESEDPDKDIYLYINSPGGSITAGN 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+ DVST+C+G+AASMGAFLLS G KGKRY+LPN+ +MIHQPLGG QG +D
Sbjct: 76 AIYDTMQYIKCDVSTICIGMAASMGAFLLSCGAKGKRYALPNAEVMIHQPLGGFQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
++ A +L K LN LS +TG+ LE I D +RD FM+AEEAK YGL+D V+ N HK
Sbjct: 136 FEIHAKRILKMKETLNKILSENTGKPLETIKADVERDNFMTAEEAKAYGLVDDVITN-HK 194
Query: 291 I 291
I
Sbjct: 195 I 195
>gi|330817271|ref|YP_004360976.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
gladioli BSR3]
gi|327369664|gb|AEA61020.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
gladioli BSR3]
Length = 217
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 143/174 (82%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AG+
Sbjct: 39 RSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGL 98
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C+GLAASMGAFLLS+G KGKRY+LPN+R+MIHQPLGGA+G SD
Sbjct: 99 AIYDTMQFIKPDVSTLCMGLAASMGAFLLSSGAKGKRYALPNARVMIHQPLGGARGQASD 158
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++QA E+L+ + LN L+ +TGQ +E+I DTDRD FMS+++AK YGLID V
Sbjct: 159 IEIQAREILYLRERLNKILADNTGQDVERIARDTDRDNFMSSDDAKAYGLIDHV 212
>gi|283784263|ref|YP_003364128.1| ATP-dependent clp protease proteolytic subunit [Citrobacter
rodentium ICC168]
gi|448236261|ref|YP_001571487.2| ClpP-like protease [Salmonella enterica subsp. arizonae serovar
62:z4,z23:- str. RSK2980]
gi|282947717|emb|CBG87272.1| ATP-dependent clp protease proteolytic subunit [Citrobacter
rodentium ICC168]
Length = 207
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 152 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|293606140|ref|ZP_06688505.1| ATP-dependent Clp protease proteolytic subunit [Achromobacter
piechaudii ATCC 43553]
gi|292815595|gb|EFF74711.1| ATP-dependent Clp protease proteolytic subunit [Achromobacter
piechaudii ATCC 43553]
Length = 217
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPV D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV AGM
Sbjct: 37 RAYDIYSRLLRERLIFLVGPVNDATANLVVAQLLFLESENPDKDISLYINSPGGSVYAGM 96
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT++ I+PDVST+C GLAASMGAFLL+AG KGKR++LPNSRIMIHQP GGAQG SD
Sbjct: 97 AIFDTMQFIKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRIMIHQPSGGAQGQASD 156
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I +QA E+L + LN L+ +TGQ++E+I DT+RD FMSAE+A YGL+D V+
Sbjct: 157 IQIQAREILDLRERLNRILADNTGQSMERIGLDTERDNFMSAEDAVSYGLVDKVM 211
>gi|291616549|ref|YP_003519291.1| ClpP [Pantoea ananatis LMG 20103]
gi|386014922|ref|YP_005933199.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pantoea
ananatis AJ13355]
gi|291151579|gb|ADD76163.1| ClpP [Pantoea ananatis LMG 20103]
gi|327392981|dbj|BAK10403.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pantoea
ananatis AJ13355]
Length = 218
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 40 RSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 99
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AGTKGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 100 SIYDTMKFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATD 159
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L K +N ++ HTG++LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 160 IEIHAREILKVKQRMNELMAEHTGKSLEEIERDTERDRFLSASEAVEYGLVDSIL 214
>gi|375122544|ref|ZP_09767708.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. SG9]
gi|326626794|gb|EGE33137.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. SG9]
Length = 246
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 71 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 130
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 131 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 190
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 191 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 242
>gi|121593621|ref|YP_985517.1| ATP-dependent Clp protease proteolytic subunit [Acidovorax sp.
JS42]
gi|166201795|sp|A1W5B6.1|CLPP_ACISJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|120605701|gb|ABM41441.1| ATP-dependent Clp protease proteolytic subunit ClpP [Acidovorax sp.
JS42]
Length = 202
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 145/192 (75%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
Q G PM++ R ++ S+L + R+I G V D AN++VAQLL+L++ +P+K
Sbjct: 7 QALGMIPMVIEQSGRGERSYDIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLESENPDK 66
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI Y+NSPGGSVTAGMAI+DT++ I+PDVST+C G AASMGAFLL+AG KGKRYSLPNS
Sbjct: 67 DISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCCGFAASMGAFLLAAGAKGKRYSLPNS 126
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
+IMIHQ LGGA+G +DI++ A ++L K +N L+ TGQ +EK+ DT+RD+FM+A+
Sbjct: 127 KIMIHQVLGGARGQATDIEIHARDILRTKEQMNRILAERTGQPIEKVKADTERDYFMTAD 186
Query: 274 EAKDYGLIDGVV 285
EAKDYG++D V+
Sbjct: 187 EAKDYGIVDQVI 198
>gi|78184632|ref|YP_377067.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9902]
gi|124013818|sp|Q3AY04.1|CLPP1_SYNS9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|78168926|gb|ABB26023.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9902]
Length = 197
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/186 (62%), Positives = 138/186 (74%), Gaps = 5/186 (2%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V D AN IVAQ+L+L+A DP KDI +Y+NSPGGSV G+ IF
Sbjct: 17 DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGSVYDGLGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HI+PDV TVCVGLAASMGAFLL AGTKGKR SL +SRIMIHQPLGGA G SDI +
Sbjct: 77 DTMQHIKPDVQTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQPLGGASGQASDIRI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKILQ 293
QA+E+L+ K LN LS TGQ L++I EDTDRDFFMS EA YGLID V+ +
Sbjct: 137 QADEILYLKDRLNTELSDRTGQPLDRIQEDTDRDFFMSPGEAVSYGLIDSVIDK-----R 191
Query: 294 PVAAAA 299
PV A A
Sbjct: 192 PVQAVA 197
>gi|397618063|gb|EJK64740.1| hypothetical protein THAOC_14495 [Thalassiosira oceanica]
Length = 287
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 107/176 (60%), Positives = 139/176 (78%)
Query: 110 GRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAG 169
G ++V+S+L Q RII G V+D++AN++VAQLLYL DP KDI +Y+NSPGGSV+AG
Sbjct: 97 GSQKDVISRLLQDRIILLGQGVDDEIANVLVAQLLYLANEDPTKDITLYINSPGGSVSAG 156
Query: 170 MAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQS 229
MAI+DT++++ DVSTVC G+AASMGAFLL AG GKR +LPNSRIMIHQPLGGAQG +
Sbjct: 157 MAIYDTMQYVPCDVSTVCFGMAASMGAFLLGAGAPGKRRALPNSRIMIHQPLGGAQGQAA 216
Query: 230 DIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
DI++QA E+L + LN Y++ + GQ +KI D DRDFFM+AEEA DYG+ID ++
Sbjct: 217 DIEIQAKEILFIREVLNTYIAEYCGQPKDKIEADCDRDFFMTAEEAVDYGIIDEMI 272
>gi|395232657|ref|ZP_10410907.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter sp.
Ag1]
gi|394733059|gb|EJF32698.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter sp.
Ag1]
Length = 207
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMKFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ HTG++LE+I +DT+RD F+SA EA +YGL+D ++
Sbjct: 149 IEIHAKEILKVKARMNELMAEHTGKSLEQIEKDTERDRFLSASEAVEYGLVDSIL 203
>gi|452077512|gb|AGF93469.1| ATP-dependent Clp protease proteolytic subunit clpP [uncultured
organism]
Length = 201
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ GPV D+++N+I+AQ+L+L+A +P++DI +Y+N+ GG VT G+
Sbjct: 20 RTYDIYSRLLKDRIVFLKGPVTDELSNVIIAQMLFLEAENPSQDINLYINTQGGVVTGGL 79
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++++P+V T+CVG A+SMGA LL+AG GKRY+LPNSRI+IHQPLGGAQG +D
Sbjct: 80 AIYDTMQYVKPEVKTICVGQASSMGALLLAAGEAGKRYALPNSRILIHQPLGGAQGQATD 139
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
+++ ANE++ K +N L+ HTGQ L+KI EDT+RDFFMS EEA+DYGLID V+
Sbjct: 140 VEIHANELVKVKERVNNILADHTGQPLDKIQEDTERDFFMSPEEAEDYGLIDEVI 194
>gi|421484311|ref|ZP_15931882.1| ATP-dependent Clp protease proteolytic subunit [Achromobacter
piechaudii HLE]
gi|400197520|gb|EJO30485.1| ATP-dependent Clp protease proteolytic subunit [Achromobacter
piechaudii HLE]
Length = 217
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPV D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV AGM
Sbjct: 37 RAYDIYSRLLRERLIFLVGPVNDATANLVVAQLLFLESENPDKDISLYINSPGGSVYAGM 96
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT++ I+PDVST+C GLAASMGAFLL+AG KGKR++LPNSRIMIHQP GGAQG SD
Sbjct: 97 AIFDTMQFIKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRIMIHQPSGGAQGQASD 156
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I +QA E+L + LN L+ +TGQ++E+I DT+RD FMSAE+A YGL+D V+
Sbjct: 157 IQIQAREILDLRERLNRILADNTGQSMERIGLDTERDNFMSAEDAVSYGLVDKVM 211
>gi|395006778|ref|ZP_10390579.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
sp. CF316]
gi|394315232|gb|EJE52048.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
sp. CF316]
Length = 202
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/192 (56%), Positives = 148/192 (77%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
Q G PM++ GR + ++ S+L + RII G V D AN++VAQLL+L++ +P+K
Sbjct: 7 QALGMVPMVIEQSGRGERSYDIYSRLLKERIIFLVGEVNDQTANLVVAQLLFLESENPDK 66
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI Y+NSPGGSVTAGMAI+DT++ I+PDVST+CVG AASMGAFLL+AG KGKR+SLPNS
Sbjct: 67 DISFYINSPGGSVTAGMAIYDTMQFIKPDVSTMCVGFAASMGAFLLAAGAKGKRFSLPNS 126
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
+IMIHQ LGGA+G +DI++ A ++L K +N L+ TGQ LEK+ DT+RD+F++A+
Sbjct: 127 KIMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPLEKVKNDTERDYFLTAD 186
Query: 274 EAKDYGLIDGVV 285
EAK+YGL+D V+
Sbjct: 187 EAKEYGLVDQVI 198
>gi|255102472|ref|ZP_05331449.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-63q42]
Length = 194
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/174 (62%), Positives = 136/174 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D A +IVAQLL+L+A DP+KDI +Y+NSPGGS+T+GM
Sbjct: 16 RSYDIFSRLLKDRIIFLGDQVNDATAGLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G+AASMGAFLL+AG KGKR +LPNS IMIHQPLGGAQG +D
Sbjct: 76 AIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRLALPNSEIMIHQPLGGAQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++ A +L K LN S TGQ LEKI DT+RD FMSA EAK+YGLID V
Sbjct: 136 IEIHAKRILKIKETLNEIFSERTGQPLEKIKMDTERDNFMSALEAKEYGLIDEV 189
>gi|441506114|ref|ZP_20988091.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium sp.
AK15]
gi|441426253|gb|ELR63738.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium sp.
AK15]
Length = 207
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN++VAQLL+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+P+VSTVC+G A SMGAFLL+ G +GKRY LPNSR+MIHQPLGG QG SD
Sbjct: 89 SIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAQGKRYCLPNSRVMIHQPLGGFQGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ HTGQ LE + DTDRD FMSAE+A +YGL+D V+
Sbjct: 149 IQIHAQEILTIKQKLNNLLAEHTGQPLEVVERDTDRDNFMSAEQAVEYGLVDAVL 203
>gi|406981698|gb|EKE03119.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 207
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 100/177 (56%), Positives = 140/177 (79%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G ++D +AN++VAQLL+LDA +P KDI+MY+NSPGG ++AG+AI+
Sbjct: 25 DIFSRLLRERIIFLGTEIDDQVANLMVAQLLFLDAENPEKDIVMYINSPGGVISAGLAIY 84
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++H+R D++T+C+G AASMG+FLL+AGT GKR SLP+SRIMIHQP GGA+G SDI L
Sbjct: 85 DTMQHVRADIATMCIGEAASMGSFLLAAGTAGKRMSLPHSRIMIHQPSGGARGQASDIML 144
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
+A E+ K +N L+ HTGQ+ +KI +D+DRDF+M EEAK+YGLID ++ K
Sbjct: 145 EAAEIARIKRQMNELLAKHTGQSFKKIEQDSDRDFYMGPEEAKEYGLIDKIITKQEK 201
>gi|429462878|ref|YP_007184341.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451811375|ref|YP_007447830.1| ATP-dependent Clp protease, protease subunit [Candidatus
Kinetoplastibacterium crithidii TCC036E]
gi|429338392|gb|AFZ82815.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451776533|gb|AGF47532.1| ATP-dependent Clp protease, protease subunit [Candidatus
Kinetoplastibacterium crithidii TCC036E]
Length = 203
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 140/177 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GP++D+MAN++VAQ+L+L++ +P KDI +Y+NSPGGSV AG+
Sbjct: 26 RAYDIYSRLLKERIIFLVGPIDDNMANLVVAQMLFLESENPKKDIHLYINSPGGSVYAGL 85
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT++ I+PDVST+C G+AASMGAFLLSAG KGKR+SLP+S IMIHQP GG +G SD
Sbjct: 86 AIFDTMKFIKPDVSTMCTGIAASMGAFLLSAGEKGKRFSLPSSSIMIHQPSGGVKGQSSD 145
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I + A E+L + LN ++Y+TGQ++E I DTDRD+FMSA EA YGLID V+ N
Sbjct: 146 IQIHAKEILRLRDMLNSIMAYNTGQSIETIIGDTDRDYFMSANEALSYGLIDKVLTN 202
>gi|237751093|ref|ZP_04581573.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter bilis
ATCC 43879]
gi|229373538|gb|EEO23929.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter bilis
ATCC 43879]
Length = 196
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 107/200 (53%), Positives = 150/200 (75%), Gaps = 7/200 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
YIP Y + G G R ++ S+L + RII G ++D +++ IVAQLL+L+A D
Sbjct: 3 YIP-YVIEKTGRGE------RSYDIYSRLLKDRIIMLSGEIDDSVSSSIVAQLLFLEAED 55
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P KD+ +Y+NSPGGSVT+G +I+DT+ +I+PD+ T+CVG AASMGAFLLS GTKGKRY+L
Sbjct: 56 PQKDVFLYINSPGGSVTSGFSIYDTMNYIKPDICTICVGQAASMGAFLLSCGTKGKRYAL 115
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
P++RIMIHQPLGGA+G +DI++QA E+L K +N L+ +TGQ+++KI +D +RDF+M
Sbjct: 116 PHARIMIHQPLGGARGQATDIEIQAKEILRLKTIINDILAANTGQSVKKITQDCERDFYM 175
Query: 271 SAEEAKDYGLIDGVVMNPHK 290
SA+EA+ YGLID V+ K
Sbjct: 176 SADEAQKYGLIDSVMTRSSK 195
>gi|205351759|ref|YP_002225560.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|445132409|ref|ZP_21382196.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
gi|205271540|emb|CAR36358.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|444849097|gb|ELX74214.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
Length = 207
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 152 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|188585728|ref|YP_001917273.1| ATP-dependent Clp protease proteolytic subunit ClpP [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|259585960|sp|B2A158.1|CLPP_NATTJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|179350415|gb|ACB84685.1| ATP-dependent Clp protease proteolytic subunit ClpP [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 197
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 144/178 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G + DD+AN ++AQ+L+L++ DP+KDI +Y+NSPGG V AG+
Sbjct: 16 RSYDIYSRLLKDRIIFIGTGINDDIANSVIAQMLFLESEDPDKDIHLYINSPGGHVHAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++IR DVST+CVG+AASMGA LL+AG +GKR+ LPNSRIM+HQP+GGAQG +D
Sbjct: 76 AIYDTMQYIRSDVSTICVGMAASMGAVLLAAGNEGKRFCLPNSRIMLHQPMGGAQGQAAD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
+++ A E++ K LN L++HTGQ +E+I++DTDRDFFMS+EEA+ YG+ID V+ P
Sbjct: 136 VEIHAREIMKTKERLNQILAHHTGQPVEQISKDTDRDFFMSSEEAQKYGVIDDVLKRP 193
>gi|392548930|ref|ZP_10296067.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
rubra ATCC 29570]
Length = 205
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 133/174 (76%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQLL+L++ P KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKERIIFLTGQVEDHMANLIVAQLLFLESESPEKDIYLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ I+PDVSTVCVG AASMGAFLLS G KGKRY LPNSR+MIHQPLGG QG SD
Sbjct: 85 SIYDTMNFIKPDVSTVCVGQAASMGAFLLSGGAKGKRYCLPNSRVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
++ A E+L K LN ++ HTGQ + I DTDRD FM+AE+A DYGL+D V
Sbjct: 145 FEIHAKEILTIKEKLNRLMAEHTGQPYDVIANDTDRDNFMNAEQAVDYGLVDAV 198
>gi|379699669|ref|YP_005241397.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. ST4/74]
gi|323128768|gb|ADX16198.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. ST4/74]
Length = 246
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 71 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 130
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 131 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 190
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 191 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 242
>gi|89098789|ref|ZP_01171670.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. NRRL
B-14911]
gi|89086465|gb|EAR65585.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. NRRL
B-14911]
Length = 201
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D+++N IVAQLL+L+A +P KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIMLGSAIDDNVSNSIVAQLLFLEAENPEKDITLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++IRP VSTVC+G+AASMGAFLL+AG KGKR++LPNS +MIHQPLGGAQG ++
Sbjct: 76 AIYDTMQYIRPKVSTVCIGMAASMGAFLLAAGEKGKRFALPNSEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +L + LN LS TGQ LE I +DTDRD FM+AE A +YGLID ++
Sbjct: 136 IEIAAKRILFLREKLNQILSERTGQPLEVIAKDTDRDNFMTAERALEYGLIDQII 190
>gi|33861299|ref|NP_892860.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|67460516|sp|Q7V1W0.1|CLPP1_PROMP RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|33633876|emb|CAE19201.1| Clp protease subunit [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 196
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 140/187 (74%), Gaps = 5/187 (2%)
Query: 99 EQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMY 158
E+ GG R ++ S+L + RII G V D AN IVAQLL+L+A DP KDI MY
Sbjct: 7 EESGGSE-----RVFDIYSRLLRERIIFLGEQVTSDTANRIVAQLLFLEAEDPEKDIYMY 61
Query: 159 LNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIH 218
+NSPGGSV G+ IFDT++H++PD+ TVCVGLAASMGAFLL+AGTKGKR SL +SRIMIH
Sbjct: 62 INSPGGSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIH 121
Query: 219 QPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDY 278
QPLGGA+G SDI +QA+E+L+ K LN LS TG+ LE I DTDRDF+MS +EA +Y
Sbjct: 122 QPLGGARGQASDIRIQADEILYLKERLNTELSERTGKELETIKGDTDRDFYMSPQEAVEY 181
Query: 279 GLIDGVV 285
GLID V+
Sbjct: 182 GLIDLVL 188
>gi|253681101|ref|ZP_04861904.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum D str. 1873]
gi|331270305|ref|YP_004396797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum BKT015925]
gi|416350488|ref|ZP_11680890.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum C str. Stockholm]
gi|253562950|gb|EES92396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum D str. 1873]
gi|329126855|gb|AEB76800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum BKT015925]
gi|338196268|gb|EGO88472.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum C str. Stockholm]
Length = 195
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 140/180 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D A+++VAQLL+L+A DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RSYDIYSRLLKDRIIFLGEEVNDVSASLVVAQLLFLEAEDPDKDIYLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G+AASMGAFLL+AG KGKR++LPNS IMIHQPLGG QG +D
Sbjct: 76 AIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEIMIHQPLGGFQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I + AN +L K LN LS TG+ LE I +D +RD FM A+EAK+YGLID V+ + K
Sbjct: 136 IGIHANRILKIKDKLNKILSERTGKPLEVIKKDVERDNFMEADEAKEYGLIDDVITSRKK 195
>gi|150016209|ref|YP_001308463.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
beijerinckii NCIMB 8052]
gi|149902674|gb|ABR33507.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
beijerinckii NCIMB 8052]
Length = 199
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/181 (58%), Positives = 140/181 (77%), Gaps = 1/181 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V DD AN+IVAQLL+L++ DP+KDI +Y+NSPGGS+TAG
Sbjct: 16 RSYDIFSRLLKERIIMLSGEVNDDSANLIVAQLLFLESEDPDKDIYIYINSPGGSITAGN 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+ DVST+C+G+AASMGAFLLS+GTKGKR++LPN+ +MIHQPLGG QG +D
Sbjct: 76 AIYDTMQYIKCDVSTICIGMAASMGAFLLSSGTKGKRFALPNAEVMIHQPLGGFQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
++ A +L K LN LS +TG+ LE I D +RD FMSAEEAK YGL+D V+ HK
Sbjct: 136 FEIHAKRILKMKETLNRILSENTGKPLETIKADVERDNFMSAEEAKAYGLVDEVI-TTHK 194
Query: 291 I 291
I
Sbjct: 195 I 195
>gi|109899441|ref|YP_662696.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
atlantica T6c]
gi|410627460|ref|ZP_11338199.1| ATP-dependent Clp protease, protease subunit [Glaciecola mesophila
KMM 241]
gi|123064308|sp|Q15R46.1|CLPP_PSEA6 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|109701722|gb|ABG41642.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Pseudoalteromonas atlantica T6c]
gi|410152952|dbj|GAC24968.1| ATP-dependent Clp protease, protease subunit [Glaciecola mesophila
KMM 241]
Length = 212
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 136/177 (76%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + +I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKENVIFMVGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDVSTVC+G AASMGAFLLS G KGKRY LPN+R+MIHQPLGG QG SD
Sbjct: 85 AIYDTMNFIKPDVSTVCIGQAASMGAFLLSGGAKGKRYCLPNARVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
++ A E+L K +N ++ HTGQ +K+ DTDRD F+SA+E+ DYGL+D V+ N
Sbjct: 145 FEIHAKEILSIKEKMNRLMAAHTGQDYDKVARDTDRDNFLSAQESVDYGLVDQVLAN 201
>gi|113953857|ref|YP_729303.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9311]
gi|113881208|gb|ABI46166.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. CC9311]
Length = 229
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 153/219 (69%), Gaps = 10/219 (4%)
Query: 70 CESTWKGIWSIRNDLEVP-SSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCG 128
E+ W+G + P +SP +PT + + G G R ++ S+L + RII G
Sbjct: 10 IENRWRGTLPVSA--HTPHASPGVPTVVE-QSGRGE------RSFDIYSRLLRERIIFLG 60
Query: 129 GPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCV 188
V D +A+ +VAQLL+L+A DP KDI +Y+NSPGGS+TAG+AI+DT++ + PDV T+C
Sbjct: 61 TDVNDQVADALVAQLLFLEAEDPEKDIQVYINSPGGSITAGLAIYDTMQQVAPDVVTICY 120
Query: 189 GLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGY 248
GLAASMGAFLLS G KGKR +LPN+RIMIHQPLGGAQG DI++ A E+L K LNG
Sbjct: 121 GLAASMGAFLLSGGCKGKRLALPNARIMIHQPLGGAQGQAVDIEIMAQEILFLKETLNGL 180
Query: 249 LSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
++ HTGQ L KI EDT+RD+F+S EA +YGLID VV N
Sbjct: 181 MADHTGQPLAKITEDTERDYFLSPAEAVEYGLIDRVVDN 219
>gi|220934115|ref|YP_002513014.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219995425|gb|ACL72027.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 216
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPVED MAN+IVAQLL+L++ +P+KDI +Y+NSPGG+VTAGM
Sbjct: 32 RAYDIYSRLLKERVIFAVGPVEDYMANVIVAQLLFLESENPDKDISLYINSPGGAVTAGM 91
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C+G AASMGA LL+ G KGKR+ LP+SR+MIHQPLGG QG +D
Sbjct: 92 AIYDTMQFIKPDVSTLCIGQAASMGAVLLAGGAKGKRFCLPHSRVMIHQPLGGFQGQATD 151
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
ID+ A E+L +A LN L++HTGQ++E+I +DT+RD F++ EA +YGLID V+
Sbjct: 152 IDIHAREILKVRAELNRILAHHTGQSIEQIEQDTERDRFLNPVEAAEYGLIDQVL 206
>gi|410633403|ref|ZP_11344049.1| ATP-dependent Clp protease, protease subunit [Glaciecola arctica
BSs20135]
gi|410147118|dbj|GAC20916.1| ATP-dependent Clp protease, protease subunit [Glaciecola arctica
BSs20135]
Length = 213
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 136/177 (76%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + II G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKENIIFLVGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+P+VST+C+G AASMGAFLLSAG KGKRY LPNSR+MIHQPLGG QG SD
Sbjct: 85 AIYDTMNFIKPNVSTICIGQAASMGAFLLSAGEKGKRYCLPNSRVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
++ A E+L K +N ++ HTG+ E + +DTDRD F+SA+EA +YGLID V N
Sbjct: 145 FEIHAKEILSIKEKMNRLMAQHTGKDYETVAKDTDRDNFLSADEAMEYGLIDKVFTN 201
>gi|145642383|ref|ZP_01797943.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae R3021]
gi|145272926|gb|EDK12812.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 22.4-21]
Length = 193
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 139/177 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L++ DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDINIYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+ D+ T+C+G A SMGAFLL+ GT GKR +LPN+R+MIHQPLGG +G SD
Sbjct: 76 AIYDTMQFIKSDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVMIHQPLGGFRGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I + A E+L K LN L++HTGQ++E+I +DTDRD FMSAEEA+ YGL+D V++
Sbjct: 136 IQIHAQEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEAQAYGLVDEVLVK 192
>gi|385784973|ref|YP_005761146.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis N920143]
gi|339895229|emb|CCB54551.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus lugdunensis N920143]
Length = 195
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 141/179 (78%), Gaps = 1/179 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAG
Sbjct: 16 RAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDFEKDIYLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DTI+HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPH 289
I++ AN +L + LN L+ TGQ++E+I +DTDRD F++AEEAK YGLID VM P
Sbjct: 136 IEIAANHILKTREKLNRILAERTGQSIEQIQKDTDRDNFLTAEEAKAYGLIDE-VMEPE 193
>gi|85058649|ref|YP_454351.1| ATP-dependent Clp protease proteolytic subunit [Sodalis
glossinidius str. 'morsitans']
gi|84779169|dbj|BAE73946.1| ATP-dependent Clp protease proteolytic subunit [Sodalis
glossinidius str. 'morsitans']
Length = 207
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+++L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIFSRLLKERIIFMTGQVEDHMANLIVAQMMFLEAENPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTFCMGQAASMGAFLLAAGAKGKRFCLPNSRVMIHQPLGGFQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ HTGQ LE I DT+RD F+SA EA DYGL+D V+
Sbjct: 149 IEIHAREILKVKARMNELMAKHTGQPLEVIERDTERDRFLSAPEAVDYGLVDSVL 203
>gi|317047175|ref|YP_004114823.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
At-9b]
gi|316948792|gb|ADU68267.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
At-9b]
Length = 207
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AGTKGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMKFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L K +N ++ HTG++LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 149 IEIHAREILKVKQRMNELMAEHTGKSLEQIERDTERDRFLSASEAVEYGLVDSIL 203
>gi|452973448|gb|EME73270.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sonorensis
L12]
Length = 198
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L+A DP KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+P VST+C G+AASMGAFLL+AG KGKRY+LPNS +MIHQPLGGAQG ++
Sbjct: 76 AIYDTMQFIKPQVSTICTGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +L + LN LS TGQ LE I DTDRD F +AEEAK+YGLID V+
Sbjct: 136 IEIAAKRILSLRDKLNKILSERTGQPLEIIERDTDRDNFKTAEEAKEYGLIDKVL 190
>gi|185177785|pdb|2ZL3|A Chain A, Crystal Structure Of H.Pylori Clpp S99a
gi|185177786|pdb|2ZL3|B Chain B, Crystal Structure Of H.Pylori Clpp S99a
gi|185177787|pdb|2ZL3|C Chain C, Crystal Structure Of H.Pylori Clpp S99a
gi|185177788|pdb|2ZL3|D Chain D, Crystal Structure Of H.Pylori Clpp S99a
gi|185177789|pdb|2ZL3|E Chain E, Crystal Structure Of H.Pylori Clpp S99a
gi|185177790|pdb|2ZL3|F Chain F, Crystal Structure Of H.Pylori Clpp S99a
gi|185177791|pdb|2ZL3|G Chain G, Crystal Structure Of H.Pylori Clpp S99a
gi|185177792|pdb|2ZL3|H Chain H, Crystal Structure Of H.Pylori Clpp S99a
gi|185177793|pdb|2ZL3|I Chain I, Crystal Structure Of H.Pylori Clpp S99a
gi|185177794|pdb|2ZL3|J Chain J, Crystal Structure Of H.Pylori Clpp S99a
gi|185177795|pdb|2ZL3|K Chain K, Crystal Structure Of H.Pylori Clpp S99a
gi|185177796|pdb|2ZL3|L Chain L, Crystal Structure Of H.Pylori Clpp S99a
gi|185177797|pdb|2ZL3|M Chain M, Crystal Structure Of H.Pylori Clpp S99a
gi|185177798|pdb|2ZL3|N Chain N, Crystal Structure Of H.Pylori Clpp S99a
gi|185177799|pdb|2ZL4|A Chain A, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177801|pdb|2ZL4|B Chain B, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177803|pdb|2ZL4|C Chain C, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177805|pdb|2ZL4|D Chain D, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177807|pdb|2ZL4|E Chain E, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177809|pdb|2ZL4|F Chain F, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177811|pdb|2ZL4|G Chain G, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177813|pdb|2ZL4|H Chain H, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177815|pdb|2ZL4|I Chain I, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177817|pdb|2ZL4|J Chain J, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177819|pdb|2ZL4|K Chain K, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177821|pdb|2ZL4|L Chain L, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177823|pdb|2ZL4|M Chain M, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177825|pdb|2ZL4|N Chain N, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
Length = 196
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 143/180 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G + D +A+ IVAQLL+L+A DP KDI +Y+NSPGG +T+G+
Sbjct: 17 RSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGL 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ IRPDVST+C+G AA+MGAFLLS G KGKR+SLP+SRIMIHQPLGGAQG SD
Sbjct: 77 SIYDTMNFIRPDVSTICIGQAAAMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++ +NE+L K +N L+ ++GQ+LE+I +DTDRDF+MSA+EAK+YGLID V+ K
Sbjct: 137 IEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK 196
>gi|374619902|ref|ZP_09692436.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium HIMB55]
gi|374303129|gb|EHQ57313.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium HIMB55]
Length = 205
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 107/193 (55%), Positives = 149/193 (77%), Gaps = 6/193 (3%)
Query: 99 EQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPN 152
EQ G PM++ R ++ S+L + R+I GP+ED MAN++VAQLL+L++ +P+
Sbjct: 10 EQALGLVPMVIEQTSRGERSFDIYSRLLKERVIFIVGPIEDQMANLVVAQLLFLESENPD 69
Query: 153 KDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 212
KDI +Y+NSPGGSVTAG++I+DT++ I+P+VST+C+G AASMGAFLLS GTKGKR LPN
Sbjct: 70 KDIHIYINSPGGSVTAGLSIYDTMQFIKPEVSTMCLGQAASMGAFLLSGGTKGKRLILPN 129
Query: 213 SRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSA 272
+R MIHQP GGAQG +DI++QA E+L + LN L+ HTGQ+L+ I +DT+RD FMSA
Sbjct: 130 ARTMIHQPSGGAQGQATDIEIQAKEILFLRERLNRLLADHTGQSLDVIEQDTERDRFMSA 189
Query: 273 EEAKDYGLIDGVV 285
E++ +YGL+D V+
Sbjct: 190 EQSVEYGLVDQVI 202
>gi|354598750|ref|ZP_09016767.1| ATP-dependent Clp protease proteolytic subunit [Brenneria sp.
EniD312]
gi|353676685|gb|EHD22718.1| ATP-dependent Clp protease proteolytic subunit [Brenneria sp.
EniD312]
Length = 207
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 136/177 (76%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERIIFLTGQVEDYMANLIVAQMLFLEAENPEKDIFLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMG+FLL+AG KGKR LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQACSMGSFLLAAGAKGKRICLPNSRVMIHQPLGGFQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++ A E+L KA +N L+ HTGQ LE I DT+RD F+SA EA DYGL+D V N
Sbjct: 149 IEIHAKEILKVKARMNELLAKHTGQPLEVIERDTERDRFLSANEAVDYGLVDSVFTN 205
>gi|313673004|ref|YP_004051115.1| ATP-dependent clp protease proteolytic subunit clpp
[Calditerrivibrio nitroreducens DSM 19672]
gi|312939760|gb|ADR18952.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Calditerrivibrio nitroreducens DSM 19672]
Length = 195
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 109/197 (55%), Positives = 145/197 (73%), Gaps = 7/197 (3%)
Query: 89 SPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDA 148
S YIP Y + G G R ++ S+L + RII G ++D +AN IVAQ+L+L+A
Sbjct: 2 SYYIP-YVIEQTGRGE------RVYDIYSRLLKDRIIFLGTAIDDTVANSIVAQMLFLEA 54
Query: 149 VDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRY 208
DP KDI +Y+NSPGG +T+G+AIFDT+ +I+PDVST+C+G AASMGA LL+ G KGKR+
Sbjct: 55 EDPKKDIYLYINSPGGVITSGLAIFDTMNYIKPDVSTICIGQAASMGAVLLACGAKGKRF 114
Query: 209 SLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDF 268
+LPN+RIMIHQPLGG QG DI++QA E+L K+ +N L+ T + +E+I+ D DRDF
Sbjct: 115 ALPNTRIMIHQPLGGFQGQAKDIEIQAKEILRLKSKINEILAERTSKPIEQIDADCDRDF 174
Query: 269 FMSAEEAKDYGLIDGVV 285
FMSAEEAK YGLID V+
Sbjct: 175 FMSAEEAKAYGLIDEVI 191
>gi|398792058|ref|ZP_10552756.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
YR343]
gi|398214190|gb|EJN00773.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
YR343]
Length = 207
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AGTKGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMKFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L K +N ++ HTG++LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 149 IEIHAREILKVKQRMNELMAEHTGKSLEEIERDTERDRFLSASEAVEYGLVDSIL 203
>gi|308070425|ref|YP_003872030.1| ATP-dependent Clp protease proteolytic subunit (endopeptidase Clp)
[Paenibacillus polymyxa E681]
gi|310643606|ref|YP_003948364.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|305859704|gb|ADM71492.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Paenibacillus polymyxa E681]
gi|309248556|gb|ADO58123.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
Length = 211
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/178 (58%), Positives = 136/178 (76%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GP++DD+AN+++AQLL+L A DP KDI +Y+NSPGGSVTAGM
Sbjct: 31 RSYDIYSRLLKDRIIFLSGPIDDDVANLVIAQLLFLSAEDPEKDINLYINSPGGSVTAGM 90
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
I+DT++ I+PDVST+CVG+AASMG+ LL+AG GKRY+L NS +MIHQPLGG QG SD
Sbjct: 91 GIYDTMQFIKPDVSTICVGMAASMGSLLLTAGAPGKRYALTNSEVMIHQPLGGIQGQASD 150
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
+ + A+ ++ +A LN TGQ LEKI DTDRDFFM AEEAK YG+ID V+ P
Sbjct: 151 MLIHADWIIKTRAKLNQIYVERTGQPLEKIERDTDRDFFMEAEEAKAYGIIDQVLSKP 208
>gi|315634780|ref|ZP_07890062.1| ATP-dependent Clp protease proteolytic subunit [Aggregatibacter
segnis ATCC 33393]
gi|315476332|gb|EFU67082.1| ATP-dependent Clp protease proteolytic subunit [Aggregatibacter
segnis ATCC 33393]
Length = 193
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 107/174 (61%), Positives = 138/174 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED+MAN+IVAQLL+L++ DP+KDI +Y+NSPGGSVTAGM
Sbjct: 16 RAYDIYSRLLKDRVIFLSGEVEDNMANLIVAQLLFLESEDPDKDINLYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDV T+CVG A SMGAFLL+ G GKR +LP++R+MIHQPLGG +G SD
Sbjct: 76 AIYDTMQFIKPDVRTLCVGQACSMGAFLLAGGAPGKRGALPHARVMIHQPLGGFRGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I + A E+L K LN L++HTGQ +E I +DTDRD FMSAEEAK+YGLID V
Sbjct: 136 IQIHAQEILKIKGTLNERLAFHTGQPIETIEKDTDRDNFMSAEEAKNYGLIDEV 189
>gi|358637944|dbj|BAL25241.1| ATP-dependent Clp protease proteolytic subunit [Azoarcus sp. KH32C]
Length = 212
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R++ GPV D AN+IVAQLL+L++ +P+KDI Y+NSPGGSV+AGM
Sbjct: 32 RAYDIYSRLLKERVVFLVGPVNDVTANLIVAQLLFLESENPDKDIFFYINSPGGSVSAGM 91
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ ++PDVST+C+G AASMG+FLL+AG KGKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 92 AIYDTMQFVKPDVSTLCIGQAASMGSFLLAAGAKGKRFCLPNSRVMIHQPLGGFQGQASD 151
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L+ +A LN L+ HTGQ +E+I +DTDRD FMSA++A +YG++D V+
Sbjct: 152 IEIHAREILNIRARLNEMLAKHTGQPVERIEKDTDRDNFMSAKDALEYGIVDKVL 206
>gi|227328849|ref|ZP_03832873.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 207
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 136/177 (76%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN++VAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERIIFLTGQVEDYMANLVVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRICLPNSRVMIHQPLGGFQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++ A E+L KA +N ++ HTGQ LE I DT+RD F+SA EA DYGL+D V N
Sbjct: 149 IEIHAKEILKVKAKMNELMAKHTGQPLEAIERDTERDRFLSASEAVDYGLVDSVFTN 205
>gi|154249786|ref|YP_001410611.1| ATP-dependent Clp protease proteolytic subunit [Fervidobacterium
nodosum Rt17-B1]
gi|154153722|gb|ABS60954.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium nodosum Rt17-B1]
Length = 206
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 144/179 (80%), Gaps = 3/179 (1%)
Query: 110 GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSV 166
GR++ ++ S+L + RII G ++D +AN++VAQLL+L+A +P+KDI +Y+NSPGG V
Sbjct: 23 GRYERAYDIYSRLLKDRIIFLGSAIDDHVANLVVAQLLFLEAENPDKDIQLYINSPGGLV 82
Query: 167 TAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQG 226
TAG+AI+DT+++++ DV+T+CVG AASMGA LL+AG KGKR++LPNSRIMIHQPLGGA+G
Sbjct: 83 TAGLAIYDTMQYVKCDVATICVGQAASMGAVLLAAGAKGKRFALPNSRIMIHQPLGGAEG 142
Query: 227 GQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
D+++ E+L K +N LS HTGQ +E+I +DTDRDFFMSA+EA +YG+ID V+
Sbjct: 143 SAKDVEILTKELLRIKRIINEILSKHTGQDIERIEKDTDRDFFMSAQEAMEYGIIDKVI 201
>gi|335042770|ref|ZP_08535797.1| protease subunit of ATP-dependent Clp protease [Methylophaga
aminisulfidivorans MP]
gi|333789384|gb|EGL55266.1| protease subunit of ATP-dependent Clp protease [Methylophaga
aminisulfidivorans MP]
Length = 210
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPVED MAN++VAQLL+L++ +P+KDI +Y+NSPGG+VTAG+
Sbjct: 30 RSYDIFSRLLKERVIFLVGPVEDQMANLVVAQLLFLESENPDKDIHLYINSPGGAVTAGL 89
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+P+VST+C+G AASMGA LL+ G +GKRY LPNSRIM+HQPLGG QG SD
Sbjct: 90 AIYDTMQFIKPNVSTLCIGQAASMGAVLLAGGAEGKRYCLPNSRIMVHQPLGGFQGQASD 149
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
D+ A E+L + LNG L+ HTGQ +E I +DTDRD FM+ E+A +YGLID V+
Sbjct: 150 FDIHAKEILSIRDRLNGILAKHTGQDIEAIRKDTDRDNFMNGEQAVEYGLIDSVL 204
>gi|116243156|sp|Q21Y67.2|CLPP_RHOFD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 202
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPV D +AN++VAQLL+L++ +P+KDI Y+NSPGGSV+AGM
Sbjct: 24 RSYDIYSRLLKERVIFLVGPVNDYVANLVVAQLLFLESDNPDKDISFYINSPGGSVSAGM 83
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT+ ++PDVST+C G+AASMGAFLL+AG KGKR+SLPNS++MIHQP GG+QG ++
Sbjct: 84 AIFDTMNFVKPDVSTLCTGMAASMGAFLLAAGAKGKRFSLPNSKVMIHQPSGGSQGQATE 143
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L + LN L+ TGQ L +I DT+RD++MSA+E K+YGLID V+
Sbjct: 144 IEIQAREILKTREQLNKILAERTGQPLARIERDTERDYYMSADECKEYGLIDQVI 198
>gi|28211967|ref|NP_782911.1| ATP-dependent Clp protease proteolytic subunit [Clostridium tetani
E88]
gi|28204410|gb|AAO36848.1| ATP-dependent clp protease proteolytic subunit [Clostridium tetani
E88]
Length = 202
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 106/176 (60%), Positives = 138/176 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII V D A++IVAQLL+L+A DP+KDI +Y+NSPGGS+T+GM
Sbjct: 24 RSYDIYSRLLKDRIIMLSDQVNDVTASLIVAQLLFLEAEDPDKDIFLYINSPGGSITSGM 83
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G+AASMGAFLL+AG KGKR++LPNS IMIHQPLGG QG +D
Sbjct: 84 AIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGFQGQATD 143
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVM 286
I + A+ +L K NLN LS TGQ LE I DT+RD FM A +AKDYGLID V++
Sbjct: 144 IGIHADRILKIKQNLNSILSEKTGQPLEVIQRDTERDNFMDANQAKDYGLIDEVMV 199
>gi|307109118|gb|EFN57356.1| hypothetical protein CHLNCDRAFT_142728 [Chlorella variabilis]
Length = 267
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 112/187 (59%), Positives = 138/187 (73%), Gaps = 4/187 (2%)
Query: 103 GPPPMLLGRFQNV----LSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMY 158
G P+L R Q++ L + RI+ GG V D A+ I++QLL LDA DP KDI M+
Sbjct: 60 GQQPILSPRTQDMAGDPFGLLLRQRIVFFGGEVNDFSADAIISQLLLLDAQDPTKDIKMF 119
Query: 159 LNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIH 218
+NSPGGSVTAGM I+D + R DV T C GLAASMGAFLL AGT+GKRYS+PN+RIMIH
Sbjct: 120 INSPGGSVTAGMGIYDAMMMCRADVQTYCFGLAASMGAFLLGAGTRGKRYSMPNARIMIH 179
Query: 219 QPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDY 278
QPLGGA G DI++QA E+++HKANLN +S +TGQ +EKI EDTDRD +MS EAK+Y
Sbjct: 180 QPLGGASGAAVDIEIQAKEIMYHKANLNRIMSQYTGQPIEKIEEDTDRDRYMSPLEAKNY 239
Query: 279 GLIDGVV 285
GLID +V
Sbjct: 240 GLIDSLV 246
>gi|153839648|ref|ZP_01992315.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AQ3810]
gi|260902813|ref|ZP_05911208.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AQ4037]
gi|417320363|ref|ZP_12106909.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
parahaemolyticus 10329]
gi|433657174|ref|YP_007274553.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
parahaemolyticus BB22OP]
gi|149746838|gb|EDM57826.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AQ3810]
gi|308108649|gb|EFO46189.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AQ4037]
gi|328473326|gb|EGF44174.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
parahaemolyticus 10329]
gi|432507862|gb|AGB09379.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
parahaemolyticus BB22OP]
Length = 208
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 136/175 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN++VAQLL+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+P+VSTVC+G A SMGAFLL+ G GKRY LPNSR+MIHQPLGG QG SD
Sbjct: 89 SIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAAGKRYVLPNSRVMIHQPLGGFQGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ HTGQ LE I DTDRD FMSAE+A +YG++D V+
Sbjct: 149 IQIHAQEILTIKQKLNNLLAEHTGQPLEVIERDTDRDNFMSAEQAVEYGIVDAVL 203
>gi|387773849|ref|ZP_10129134.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
parahaemolyticus HK385]
gi|386903670|gb|EIJ68477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
parahaemolyticus HK385]
Length = 197
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 136/175 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED+MAN+IVAQLL+L+A DP KDI +Y+NSPGG VTAG+
Sbjct: 16 RSYDIFSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPGGVVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDV+T+C G A SMGAFLLS G KGKR++LPN+R+MIHQPLGGA+G +D
Sbjct: 76 AIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I +QA E+L K L ++ H+GQ EK+ DT+RD FMSA+EA +YGLID V+
Sbjct: 136 IQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAQEAMEYGLIDKVL 190
>gi|319763664|ref|YP_004127601.1| ATP-dependent clp protease, proteolytic subunit clpp
[Alicycliphilus denitrificans BC]
gi|330824071|ref|YP_004387374.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicycliphilus denitrificans K601]
gi|317118225|gb|ADV00714.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicycliphilus denitrificans BC]
gi|329309443|gb|AEB83858.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicycliphilus denitrificans K601]
Length = 202
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 148/192 (77%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
Q G PM++ GR + ++ S+L + R+I G V D AN++VAQLL+L++ +P+K
Sbjct: 7 QALGMIPMVIEQSGRGERSYDIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLESENPDK 66
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI Y+NSPGGSVTAGMAI+DT++ I+PDVST+C G AASMGAFLL+AG KGKR+SLPNS
Sbjct: 67 DISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCCGFAASMGAFLLAAGAKGKRFSLPNS 126
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
+IMIHQ LGGA+G +DI++ A ++L K +N L+ TGQ++EK+ DT+RD+FM+A+
Sbjct: 127 KIMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQSIEKVKADTERDYFMTAD 186
Query: 274 EAKDYGLIDGVV 285
EA+DYGL+D V+
Sbjct: 187 EARDYGLVDQVI 198
>gi|310657900|ref|YP_003935621.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [[Clostridium] sticklandii]
gi|308824678|emb|CBH20716.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [[Clostridium] sticklandii]
Length = 194
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D A++IVAQLL+L++ DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RSYDIYSRLLKDRIIFLGDQVNDHTASLIVAQLLHLESEDPDKDIFLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDV+T+CVG+AASMGAFLL+AG KGKR++LPNS IMIHQPLGG QG +D
Sbjct: 76 AIYDTMQYIKPDVATICVGMAASMGAFLLTAGAKGKRFALPNSEIMIHQPLGGTQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A ++ + LN ++ +GQ LEKI DT+RDFFMS+ EAK+YGLID V+
Sbjct: 136 IKIHAERIIRMRNKLNEIMADRSGQPLEKIERDTERDFFMSSTEAKEYGLIDEVL 190
>gi|224373739|ref|YP_002608111.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nautilia
profundicola AmH]
gi|223589486|gb|ACM93222.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nautilia
profundicola AmH]
Length = 196
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G + D +++IIVAQ+L+L+A +P KDI +Y+NSPGG VT+GM
Sbjct: 17 RAYDIYSRLLKDRIIMLQGEINDHVSSIIVAQMLFLEAENPEKDIYLYINSPGGVVTSGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ +I+PDV T+C+G AASMGAFLLS+G KGKR++LP++RIMIHQPLGGAQG +D
Sbjct: 77 AIYDTMNYIKPDVVTICMGQAASMGAFLLSSGAKGKRFALPHARIMIHQPLGGAQGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L K LN L+ +TGQ++ KI DT+RDFFMSAEEA YGLID V+
Sbjct: 137 IEIHAKEILRMKKELNKILAENTGQSVRKIERDTERDFFMSAEEAMKYGLIDKVL 191
>gi|93278470|pdb|1YG8|A Chain A, The Structure Of A V6a Variant Of Clpp.
gi|93278471|pdb|1YG8|B Chain B, The Structure Of A V6a Variant Of Clpp.
gi|93278472|pdb|1YG8|C Chain C, The Structure Of A V6a Variant Of Clpp.
gi|93278473|pdb|1YG8|D Chain D, The Structure Of A V6a Variant Of Clpp.
gi|93278474|pdb|1YG8|E Chain E, The Structure Of A V6a Variant Of Clpp.
gi|93278475|pdb|1YG8|F Chain F, The Structure Of A V6a Variant Of Clpp.
gi|93278476|pdb|1YG8|G Chain G, The Structure Of A V6a Variant Of Clpp.
gi|93278477|pdb|1YG8|H Chain H, The Structure Of A V6a Variant Of Clpp.
gi|93278478|pdb|1YG8|I Chain I, The Structure Of A V6a Variant Of Clpp.
gi|93278479|pdb|1YG8|J Chain J, The Structure Of A V6a Variant Of Clpp.
gi|93278480|pdb|1YG8|K Chain K, The Structure Of A V6a Variant Of Clpp.
gi|93278481|pdb|1YG8|L Chain L, The Structure Of A V6a Variant Of Clpp.
gi|93278482|pdb|1YG8|M Chain M, The Structure Of A V6a Variant Of Clpp.
gi|93278483|pdb|1YG8|N Chain N, The Structure Of A V6a Variant Of Clpp.
gi|93278484|pdb|1YG8|O Chain O, The Structure Of A V6a Variant Of Clpp.
gi|93278485|pdb|1YG8|P Chain P, The Structure Of A V6a Variant Of Clpp.
gi|93278486|pdb|1YG8|Q Chain Q, The Structure Of A V6a Variant Of Clpp.
gi|93278487|pdb|1YG8|R Chain R, The Structure Of A V6a Variant Of Clpp.
gi|93278488|pdb|1YG8|S Chain S, The Structure Of A V6a Variant Of Clpp.
gi|93278489|pdb|1YG8|T Chain T, The Structure Of A V6a Variant Of Clpp.
gi|93278490|pdb|1YG8|U Chain U, The Structure Of A V6a Variant Of Clpp.
gi|93278491|pdb|1YG8|V Chain V, The Structure Of A V6a Variant Of Clpp.
gi|93278492|pdb|1YG8|W Chain W, The Structure Of A V6a Variant Of Clpp.
gi|93278493|pdb|1YG8|X Chain X, The Structure Of A V6a Variant Of Clpp.
gi|93278494|pdb|1YG8|Y Chain Y, The Structure Of A V6a Variant Of Clpp.
gi|93278495|pdb|1YG8|Z Chain Z, The Structure Of A V6a Variant Of Clpp.
gi|93278496|pdb|1YG8|AA Chain a, The Structure Of A V6a Variant Of Clpp.
gi|93278497|pdb|1YG8|BB Chain b, The Structure Of A V6a Variant Of Clpp
Length = 193
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 138/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 18 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 77
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 78 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 137
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N ++ HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 138 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 189
>gi|406671266|ref|ZP_11078505.1| ATP-dependent Clp protease proteolytic subunit [Facklamia hominis
CCUG 36813]
gi|405580516|gb|EKB54575.1| ATP-dependent Clp protease proteolytic subunit [Facklamia hominis
CCUG 36813]
Length = 200
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED+MAN ++AQLL+LDA DP+KDI +Y+NSPGGSVTAG+
Sbjct: 16 RAYDIYSRLLKDRIIMLSGQVEDNMANAVIAQLLFLDAQDPDKDIYLYINSPGGSVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT+ I+ DV T+ +GLAASMG+ LL+AGTKGKRY+LPN+ IMIHQPLGGAQG ++
Sbjct: 76 AIFDTMNFIKADVQTIVIGLAASMGSVLLAAGTKGKRYALPNAEIMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +L + LN LS TGQ +E I +DTDRD FM+A EAK+YGL+D V+
Sbjct: 136 IEIAARHILKTRQRLNQILSERTGQPIEVIEKDTDRDNFMTAIEAKEYGLVDDVL 190
>gi|300900508|ref|ZP_07118675.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 198-1]
gi|300924164|ref|ZP_07140156.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 182-1]
gi|300937054|ref|ZP_07151920.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 21-1]
gi|300958005|ref|ZP_07170169.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 175-1]
gi|300988008|ref|ZP_07178488.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 45-1]
gi|300997374|ref|ZP_07181714.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 200-1]
gi|301022569|ref|ZP_07186441.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 69-1]
gi|301049644|ref|ZP_07196593.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 185-1]
gi|301301588|ref|ZP_07207723.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 124-1]
gi|301647363|ref|ZP_07247175.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 146-1]
gi|309787029|ref|ZP_07681641.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 1617]
gi|312964538|ref|ZP_07778794.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2362-75]
gi|312970533|ref|ZP_07784714.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1827-70]
gi|386612632|ref|YP_006132298.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli UMNK88]
gi|414574650|ref|ZP_11431859.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 3233-85]
gi|415777142|ref|ZP_11488394.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3431]
gi|415790316|ref|ZP_11494958.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPECa14]
gi|415801142|ref|ZP_11499543.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli E128010]
gi|415814597|ref|ZP_11506195.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli LT-68]
gi|415821038|ref|ZP_11510052.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli OK1180]
gi|415828317|ref|ZP_11514914.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli OK1357]
gi|415836283|ref|ZP_11518695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli RN587/1]
gi|415852351|ref|ZP_11528727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 53G]
gi|415859379|ref|ZP_11533654.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2a str. 2457T]
gi|415862715|ref|ZP_11536155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 85-1]
gi|415873838|ref|ZP_11541011.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 79-10]
gi|416895867|ref|ZP_11925751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_7v]
gi|417579661|ref|ZP_12230483.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_B2F1]
gi|417585232|ref|ZP_12236012.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_C165-02]
gi|417590120|ref|ZP_12240840.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2534-86]
gi|417595362|ref|ZP_12246032.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3030-1]
gi|417600719|ref|ZP_12251304.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_94C]
gi|417606429|ref|ZP_12256958.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_DG131-3]
gi|417611470|ref|ZP_12261944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_EH250]
gi|417616826|ref|ZP_12267260.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli G58-1]
gi|417621706|ref|ZP_12272035.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_H.1.8]
gi|417627380|ref|ZP_12277627.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_MHI813]
gi|417632922|ref|ZP_12283143.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_S1191]
gi|417637737|ref|ZP_12287912.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TX1999]
gi|417665523|ref|ZP_12315090.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_O31]
gi|417674312|ref|ZP_12323745.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 155-74]
gi|417680634|ref|ZP_12330019.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 3594-74]
gi|417688200|ref|ZP_12337446.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 5216-82]
gi|417700589|ref|ZP_12349729.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-218]
gi|417705975|ref|ZP_12355040.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri VA-6]
gi|417710994|ref|ZP_12360001.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-272]
gi|417715955|ref|ZP_12364888.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-227]
gi|417721425|ref|ZP_12370271.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-304]
gi|417726776|ref|ZP_12375520.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-671]
gi|417731925|ref|ZP_12380596.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2747-71]
gi|417737258|ref|ZP_12385864.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 4343-70]
gi|417741876|ref|ZP_12390428.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2930-71]
gi|418042554|ref|ZP_12680747.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli W26]
gi|418301288|ref|ZP_12913082.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli UMNF18]
gi|418959268|ref|ZP_13511167.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli J53]
gi|418995654|ref|ZP_13543268.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1A]
gi|419049039|ref|ZP_13595958.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3B]
gi|419090429|ref|ZP_13635749.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4C]
gi|419146621|ref|ZP_13691317.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6B]
gi|419348518|ref|ZP_13889871.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13B]
gi|419805361|ref|ZP_14330499.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli AI27]
gi|420273503|ref|ZP_14775836.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA40]
gi|420345496|ref|ZP_14846928.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 965-58]
gi|422355330|ref|ZP_16436046.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 117-3]
gi|422356283|ref|ZP_16436972.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 110-3]
gi|422363028|ref|ZP_16443576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 153-1]
gi|422368704|ref|ZP_16449109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 16-3]
gi|422378071|ref|ZP_16458294.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 60-1]
gi|422378678|ref|ZP_16458885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 57-2]
gi|424094467|ref|ZP_17830242.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1985]
gi|424100869|ref|ZP_17836048.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1990]
gi|424107682|ref|ZP_17842276.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 93-001]
gi|424119733|ref|ZP_17853463.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA5]
gi|424125993|ref|ZP_17859211.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA9]
gi|424138622|ref|ZP_17870934.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA14]
gi|424453616|ref|ZP_17905171.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA33]
gi|424466383|ref|ZP_17916591.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA41]
gi|424573298|ref|ZP_18013737.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1845]
gi|424579253|ref|ZP_18019202.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1863]
gi|424817252|ref|ZP_18242403.1| ATP-dependent Clp protease proteolytic subunit [Escherichia
fergusonii ECD227]
gi|425107864|ref|ZP_18510132.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 6.0172]
gi|425113766|ref|ZP_18515604.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0566]
gi|425118532|ref|ZP_18520267.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0569]
gi|425148284|ref|ZP_18548195.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 88.0221]
gi|425172154|ref|ZP_18570568.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA504]
gi|425184183|ref|ZP_18581822.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1997]
gi|425190934|ref|ZP_18588075.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli NE1487]
gi|425203924|ref|ZP_18600068.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK2001]
gi|425271133|ref|ZP_18662647.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW15901]
gi|425276312|ref|ZP_18667656.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli ARS4.2123]
gi|425286995|ref|ZP_18677930.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3006]
gi|425298636|ref|ZP_18688686.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 07798]
gi|425321272|ref|ZP_18709959.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1737]
gi|425345948|ref|ZP_18732764.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1849]
gi|428944919|ref|ZP_19017578.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 88.1467]
gi|429024267|ref|ZP_19090687.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0427]
gi|429076828|ref|ZP_19140048.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0713]
gi|300298581|gb|EFJ54966.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 185-1]
gi|300304193|gb|EFJ58713.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 200-1]
gi|300315272|gb|EFJ65056.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 175-1]
gi|300355989|gb|EFJ71859.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 198-1]
gi|300397450|gb|EFJ80988.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 69-1]
gi|300407560|gb|EFJ91098.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 45-1]
gi|300419617|gb|EFK02928.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 182-1]
gi|300457885|gb|EFK21378.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 21-1]
gi|300843085|gb|EFK70845.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 124-1]
gi|301074508|gb|EFK89314.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 146-1]
gi|308924607|gb|EFP70102.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 1617]
gi|310337182|gb|EFQ02320.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1827-70]
gi|312290772|gb|EFR18649.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2362-75]
gi|313646936|gb|EFS11393.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2a str. 2457T]
gi|315256265|gb|EFU36233.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 85-1]
gi|315289845|gb|EFU49235.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 110-3]
gi|315294229|gb|EFU53580.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 153-1]
gi|315299561|gb|EFU58809.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 16-3]
gi|315616622|gb|EFU97239.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3431]
gi|323153474|gb|EFZ39728.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPECa14]
gi|323160452|gb|EFZ46400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli E128010]
gi|323164238|gb|EFZ50045.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 53G]
gi|323170523|gb|EFZ56173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli LT-68]
gi|323178294|gb|EFZ63872.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli OK1180]
gi|323184732|gb|EFZ70103.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli OK1357]
gi|323191357|gb|EFZ76620.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli RN587/1]
gi|324010068|gb|EGB79287.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 57-2]
gi|324010651|gb|EGB79870.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 60-1]
gi|324016702|gb|EGB85921.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 117-3]
gi|325498272|gb|EGC96131.1| ATP-dependent Clp protease proteolytic subunit [Escherichia
fergusonii ECD227]
gi|327254765|gb|EGE66381.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_7v]
gi|332085596|gb|EGI90760.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 155-74]
gi|332094593|gb|EGI99639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 5216-82]
gi|332098592|gb|EGJ03558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 3594-74]
gi|332341801|gb|AEE55135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli UMNK88]
gi|332760728|gb|EGJ91016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 4343-70]
gi|332761448|gb|EGJ91730.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2747-71]
gi|332763735|gb|EGJ93973.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-671]
gi|332768358|gb|EGJ98542.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2930-71]
gi|333007966|gb|EGK27442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-218]
gi|333008123|gb|EGK27598.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri VA-6]
gi|333010898|gb|EGK30324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-272]
gi|333020699|gb|EGK39959.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-227]
gi|333021875|gb|EGK41123.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-304]
gi|339413386|gb|AEJ55058.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli UMNF18]
gi|342930642|gb|EGU99364.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 79-10]
gi|345341457|gb|EGW73862.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_C165-02]
gi|345344081|gb|EGW76457.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_B2F1]
gi|345345293|gb|EGW77639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2534-86]
gi|345354064|gb|EGW86291.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_94C]
gi|345361730|gb|EGW93888.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3030-1]
gi|345365643|gb|EGW97750.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_DG131-3]
gi|345365955|gb|EGW98053.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_EH250]
gi|345377684|gb|EGX09615.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_MHI813]
gi|345381198|gb|EGX13083.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli G58-1]
gi|345386281|gb|EGX16116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_H.1.8]
gi|345391232|gb|EGX21026.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_S1191]
gi|345395481|gb|EGX25225.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TX1999]
gi|377849044|gb|EHU14020.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1A]
gi|377902535|gb|EHU66839.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3B]
gi|377950620|gb|EHV14247.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4C]
gi|378001549|gb|EHV64608.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6B]
gi|378204180|gb|EHX64596.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13B]
gi|383474513|gb|EID66499.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli W26]
gi|384377970|gb|EIE35862.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli J53]
gi|384471620|gb|EIE55693.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli AI27]
gi|390669796|gb|EIN46389.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 93-001]
gi|390673007|gb|EIN49260.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1990]
gi|390674047|gb|EIN50254.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1985]
gi|390692170|gb|EIN66868.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA9]
gi|390693116|gb|EIN67756.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA5]
gi|390713047|gb|EIN85990.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA14]
gi|390755179|gb|EIO24727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA33]
gi|390762421|gb|EIO31679.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA40]
gi|390776243|gb|EIO44194.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA41]
gi|390925020|gb|EIP82756.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1863]
gi|390926190|gb|EIP83784.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1845]
gi|391276380|gb|EIQ35152.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 965-58]
gi|391289278|gb|EIQ47773.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 3233-85]
gi|397786920|gb|EJK97751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_O31]
gi|408102855|gb|EKH35244.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA504]
gi|408116882|gb|EKH48149.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1997]
gi|408122383|gb|EKH53245.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli NE1487]
gi|408132502|gb|EKH62478.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK2001]
gi|408198909|gb|EKI24120.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW15901]
gi|408207207|gb|EKI31961.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli ARS4.2123]
gi|408218929|gb|EKI43111.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3006]
gi|408221639|gb|EKI45572.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 07798]
gi|408253459|gb|EKI75053.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1737]
gi|408278942|gb|EKI98609.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1849]
gi|408560349|gb|EKK36613.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 6.0172]
gi|408573157|gb|EKK49016.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0566]
gi|408573670|gb|EKK49500.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0569]
gi|408611153|gb|EKK84515.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 88.0221]
gi|427217767|gb|EKV86819.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 88.1467]
gi|427292270|gb|EKW55624.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0427]
gi|427334470|gb|EKW95539.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0713]
Length = 194
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 138/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 19 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 78
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 79 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 138
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N ++ HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 139 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 190
>gi|392307873|ref|ZP_10270407.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
citrea NCIMB 1889]
Length = 205
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/171 (63%), Positives = 132/171 (77%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G VED MAN+IVAQLL+L++ P+KDI +Y+NSPGGSVTAGM+I+
Sbjct: 28 DIFSRLLKERIIFLTGQVEDQMANLIVAQLLFLESESPDKDIFLYINSPGGSVTAGMSIY 87
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+ I+PDVSTVCVG AASMGAFLLS G KGKRY LPNSR+MIHQPLGG QG SD ++
Sbjct: 88 DTMNFIKPDVSTVCVGQAASMGAFLLSGGAKGKRYCLPNSRVMIHQPLGGFQGQASDFEI 147
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
A E+L K LN ++ HTGQ E + DTDRD FM+A EA +YGLID V
Sbjct: 148 HAKEILSIKEKLNRLMAEHTGQPYEVLAGDTDRDNFMNAHEAVEYGLIDAV 198
>gi|375309934|ref|ZP_09775212.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Aloe-11]
gi|390455656|ref|ZP_10241184.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
peoriae KCTC 3763]
gi|375077887|gb|EHS56117.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Aloe-11]
Length = 196
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 105/178 (58%), Positives = 136/178 (76%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GP++DD+AN+++AQLL+L A DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKDRIIFLSGPIDDDVANLVIAQLLFLAAEDPEKDINLYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
I+DT++ I+PDVST+CVG+AASMG+ LL+AG GKRY+L NS +MIHQPLGG QG SD
Sbjct: 76 GIYDTMQFIKPDVSTICVGMAASMGSLLLTAGAPGKRYALTNSEVMIHQPLGGIQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
+ + A+ ++ +A LN TGQ LEKI DTDRDFFM AEEAK YG+ID V+ P
Sbjct: 136 MLIHADWIIKTRAKLNQIYVERTGQPLEKIERDTDRDFFMEAEEAKAYGIIDQVLSKP 193
>gi|148242503|ref|YP_001227660.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RCC307]
gi|147850813|emb|CAK28307.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
RCC307]
Length = 196
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 135/172 (78%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G PV + AN IVAQLL+L+A DP+KDI +Y+NSPGGSV G+ IF
Sbjct: 17 DIYSRLLRERIIFMGEPVTAESANRIVAQLLFLEAEDPDKDIFLYINSPGGSVYDGLGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++H++PDV TVCVGLAASMGAFLL+AG GKR SL +SRIMIHQPLGGAQG SDI +
Sbjct: 77 DTMQHVKPDVQTVCVGLAASMGAFLLAAGAPGKRSSLQHSRIMIHQPLGGAQGQASDIRI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA+E+L K LN L+ TGQ L++I +DTDRDFFMS EA +YGLID V+
Sbjct: 137 QADEILFLKKRLNEELAQRTGQPLDRIQKDTDRDFFMSPAEAAEYGLIDKVI 188
>gi|403387723|ref|ZP_10929780.1| ATP-dependent Clp protease proteolytic subunit [Clostridium sp.
JC122]
Length = 194
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 138/177 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V A++IVAQLL+L++ DP+KDI +Y+NSPGGS+T GM
Sbjct: 16 RSYDIYSRLLKERIIFLGEEVNSTTASLIVAQLLFLESEDPDKDIYLYINSPGGSITDGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ +I+PDV T+C GLAASMGAFLLS+G KGKR++LPNS IMIHQPLGG +G +D
Sbjct: 76 AIYDTMNYIKPDVVTICTGLAASMGAFLLSSGAKGKRFALPNSEIMIHQPLGGFKGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
ID+ A ++ K LN LS +TG++LE I +D +RD+FMSAEEAK+YGLID V++
Sbjct: 136 IDIHAKRIIRIKETLNEILSENTGKSLEVIKKDVERDYFMSAEEAKEYGLIDEVIIK 192
>gi|33151467|ref|NP_872820.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus ducreyi
35000HP]
gi|60389738|sp|Q7VP78.1|CLPP_HAEDU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|33147687|gb|AAP95209.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
ducreyi 35000HP]
Length = 197
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 135/175 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQLL+L+A DP KDI +Y+NSPGG VTAG+
Sbjct: 16 RSYDIYSRLLKERIIFLNGEVEDHMANLIVAQLLFLEAEDPEKDIYLYINSPGGVVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDV+T+C G A SMGAFLLS G KGKR++LPN+R+MIHQPLGGA+G +D
Sbjct: 76 AIYDTMNFIKPDVATLCTGQACSMGAFLLSGGKKGKRFALPNARVMIHQPLGGARGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I +QA E+L K L ++ H+GQT K+ DT+RD FMSA EAK+YGLID V+
Sbjct: 136 IQIQAQEILKLKEMLTRKMAEHSGQTFAKVAADTERDNFMSATEAKNYGLIDKVL 190
>gi|423077037|ref|ZP_17065745.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Desulfitobacterium hafniense DP7]
gi|361851989|gb|EHL04277.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Desulfitobacterium hafniense DP7]
Length = 196
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 104/183 (56%), Positives = 143/183 (78%), Gaps = 3/183 (1%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGPV DD+AN++VAQ+L+L+A DP KDI +Y+NSPGGS++AGM
Sbjct: 11 RSYDIYSRLLKDRIIFLGGPVTDDVANLVVAQMLFLEAEDPEKDIFLYINSPGGSISAGM 70
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPL---GGAQGG 227
AI+DT+++IR DV T+CVGLAASMGAFLL+AG KGKR +LPN+ I+IHQPL GG G
Sbjct: 71 AIYDTMQYIRADVHTICVGLAASMGAFLLTAGAKGKRQALPNAEILIHQPLIGGGGISGQ 130
Query: 228 QSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
++I++ A +L K +N L+ TGQT+E+I DTDRD +M+A+EAK+YGLID V+
Sbjct: 131 ATEIEIHAKHLLRVKERMNRILAERTGQTIERIEADTDRDRYMTADEAKEYGLIDEVLEK 190
Query: 288 PHK 290
P++
Sbjct: 191 PNQ 193
>gi|378578414|ref|ZP_09827089.1| ATP-dependent Clp protease proteolytic subunit [Pantoea stewartii
subsp. stewartii DC283]
gi|378768262|ref|YP_005196733.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea
ananatis LMG 5342]
gi|386080397|ref|YP_005993922.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pantoea
ananatis PA13]
gi|354989578|gb|AER33702.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pantoea
ananatis PA13]
gi|365187746|emb|CCF10696.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea
ananatis LMG 5342]
gi|377818694|gb|EHU01775.1| ATP-dependent Clp protease proteolytic subunit [Pantoea stewartii
subsp. stewartii DC283]
Length = 207
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AGTKGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMKFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L K +N ++ HTG++LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 149 IEIHAREILKVKQRMNELMAEHTGKSLEEIERDTERDRFLSASEAVEYGLVDSIL 203
>gi|329120061|ref|ZP_08248731.1| ATP-dependent Clp protease, protease subunit [Neisseria
bacilliformis ATCC BAA-1200]
gi|327463592|gb|EGF09910.1| ATP-dependent Clp protease, protease subunit [Neisseria
bacilliformis ATCC BAA-1200]
Length = 211
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 152/215 (70%), Gaps = 9/215 (4%)
Query: 85 EVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLL 144
E+ ++ IPT + + G G R ++ S+L + RII GPV D AN++VAQ+L
Sbjct: 4 EISNNTLIPTVIE-QSGRGE------RAFDIYSRLLKERIIFLIGPVNDHTANLVVAQML 56
Query: 145 YLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTK 204
+L++ +P+KDI Y+NSPGGSVTAGM++FDT+ I+PDVST+C+G AASMGAFLLSAG K
Sbjct: 57 FLESENPDKDIFFYINSPGGSVTAGMSVFDTMNFIKPDVSTLCLGQAASMGAFLLSAGAK 116
Query: 205 GKRYSLPNSRIMIHQPL--GGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINE 262
GKR++LP+SR+MIHQPL GG G SDI++ A E++ K LN L+ HTGQ +EKI
Sbjct: 117 GKRFALPHSRVMIHQPLISGGLGGQASDIEIHARELIKLKQTLNELLAKHTGQPIEKIER 176
Query: 263 DTDRDFFMSAEEAKDYGLIDGVVMNPHKILQPVAA 297
DTDRD FMSA+ AK+YGLID V+ +P A
Sbjct: 177 DTDRDNFMSAQAAKEYGLIDQVIATRADAAKPAGA 211
>gi|125975222|ref|YP_001039132.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
thermocellum ATCC 27405]
gi|256003116|ref|ZP_05428108.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum DSM 2360]
gi|281419196|ref|ZP_06250212.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum JW20]
gi|385777706|ref|YP_005686871.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum DSM 1313]
gi|419722741|ref|ZP_14249878.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
thermocellum AD2]
gi|419726242|ref|ZP_14253265.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
thermocellum YS]
gi|166201818|sp|A3DJ10.1|CLPP_CLOTH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|125715447|gb|ABN53939.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum ATCC 27405]
gi|255992807|gb|EEU02897.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum DSM 2360]
gi|281407062|gb|EFB37324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum JW20]
gi|316939386|gb|ADU73420.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum DSM 1313]
gi|380770294|gb|EIC04191.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
thermocellum YS]
gi|380781121|gb|EIC10782.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
thermocellum AD2]
Length = 194
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII + D A+++VAQ+L+L+A DP+KDI +Y+NSPGGSVTAG
Sbjct: 16 RSYDIYSRLLKDRIIVLSDEINDVTASLVVAQMLFLEAEDPDKDIQLYINSPGGSVTAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++++PDVST+C+G+AASMGAFLL+AG KGKR++LPNS IMIHQPLGGA+G +D
Sbjct: 76 AIYDTMQYVKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGARGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A +++ K LN LS TGQ EKI DT+RDFFMSAEEAK YG++D V+
Sbjct: 136 IKIHAEQIIKIKNKLNRILSERTGQPFEKIERDTERDFFMSAEEAKAYGIVDEVM 190
>gi|343496564|ref|ZP_08734660.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
nigripulchritudo ATCC 27043]
gi|342821177|gb|EGU55971.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
nigripulchritudo ATCC 27043]
Length = 208
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 141/180 (78%), Gaps = 1/180 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN++VAQLL+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 29 RSYDIYSRLLKERIIFLTGQVEDQMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+++I+P+VSTVC+G A SMGAFLL+ G +GKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 89 SIYDTMQYIKPNVSTVCMGQACSMGAFLLAGGAEGKRHVLPNSRVMIHQPLGGFQGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I + A E+L K LN L+ HTGQ LE I DTDRD FMSA++A +YGL+D V+ + HK
Sbjct: 149 IQIHAQEILTIKQKLNKLLAEHTGQPLEVIERDTDRDNFMSADQAVEYGLVDSVLTH-HK 207
>gi|237707568|ref|ZP_04538049.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia
sp. 3_2_53FAA]
gi|332281588|ref|ZP_08394001.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Shigella sp.
D9]
gi|226898778|gb|EEH85037.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia
sp. 3_2_53FAA]
gi|332103940|gb|EGJ07286.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Shigella sp.
D9]
Length = 227
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 138/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 52 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 111
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 112 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 171
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N ++ HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 172 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 223
>gi|3318853|pdb|1TYF|A Chain A, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318854|pdb|1TYF|B Chain B, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318855|pdb|1TYF|C Chain C, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318856|pdb|1TYF|D Chain D, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318857|pdb|1TYF|E Chain E, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318858|pdb|1TYF|F Chain F, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318859|pdb|1TYF|G Chain G, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318860|pdb|1TYF|H Chain H, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318861|pdb|1TYF|I Chain I, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318862|pdb|1TYF|J Chain J, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318863|pdb|1TYF|K Chain K, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318864|pdb|1TYF|L Chain L, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318865|pdb|1TYF|M Chain M, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318866|pdb|1TYF|N Chain N, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|93278456|pdb|1YG6|A Chain A, Clpp
gi|93278457|pdb|1YG6|B Chain B, Clpp
gi|93278458|pdb|1YG6|C Chain C, Clpp
gi|93278459|pdb|1YG6|D Chain D, Clpp
gi|93278460|pdb|1YG6|E Chain E, Clpp
gi|93278461|pdb|1YG6|F Chain F, Clpp
gi|93278462|pdb|1YG6|G Chain G, Clpp
gi|93278463|pdb|1YG6|H Chain H, Clpp
gi|93278464|pdb|1YG6|I Chain I, Clpp
gi|93278465|pdb|1YG6|J Chain J, Clpp
gi|93278466|pdb|1YG6|K Chain K, Clpp
gi|93278467|pdb|1YG6|L Chain L, Clpp
gi|93278468|pdb|1YG6|M Chain M, Clpp
gi|93278469|pdb|1YG6|N Chain N, Clpp
gi|109157730|pdb|2FZS|A Chain A, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157731|pdb|2FZS|B Chain B, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157732|pdb|2FZS|C Chain C, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157733|pdb|2FZS|D Chain D, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157734|pdb|2FZS|E Chain E, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157735|pdb|2FZS|F Chain F, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157736|pdb|2FZS|G Chain G, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157737|pdb|2FZS|H Chain H, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157738|pdb|2FZS|I Chain I, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157739|pdb|2FZS|J Chain J, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157740|pdb|2FZS|K Chain K, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157741|pdb|2FZS|L Chain L, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157742|pdb|2FZS|M Chain M, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157743|pdb|2FZS|N Chain N, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
Length = 193
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 138/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 18 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 77
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 78 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 137
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N ++ HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 138 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 189
>gi|334123167|ref|ZP_08497196.1| ATP-dependent Clp protease, protease subunit [Enterobacter
hormaechei ATCC 49162]
gi|449472613|ref|XP_004153647.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-like
[Cucumis sativus]
gi|333391041|gb|EGK62164.1| ATP-dependent Clp protease, protease subunit [Enterobacter
hormaechei ATCC 49162]
Length = 207
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 101/172 (58%), Positives = 138/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L KA +N ++ HTGQ LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 152 HAREILKVKARMNELMAQHTGQPLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|428305261|ref|YP_007142086.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
gi|428246796|gb|AFZ12576.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
Length = 198
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 109/196 (55%), Positives = 149/196 (76%), Gaps = 8/196 (4%)
Query: 90 PYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAV 149
P +P GEQ ++ ++ ++L++ RII G V+D++AN I+A +LYLD+
Sbjct: 6 PKVPYRLPGEQ--------YTQWIDIYNRLYRERIIFLGRDVDDEIANQIIAVMLYLDSE 57
Query: 150 DPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS 209
DP KDI +Y+NSPGGSVTAGMAIFDT++HI+ DV T+CVGLAASMG+FLL+AGTKGKR +
Sbjct: 58 DPGKDIYLYINSPGGSVTAGMAIFDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLA 117
Query: 210 LPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFF 269
LP+SRIMIHQP GGA+G +DI+++A E++ + LN + +TG+ LEKI +D DRDFF
Sbjct: 118 LPHSRIMIHQPSGGARGQATDIEIEAREIIRIRRQLNQIYANNTGKPLEKIEKDMDRDFF 177
Query: 270 MSAEEAKDYGLIDGVV 285
MSA+EA +YGLID V+
Sbjct: 178 MSAQEAMEYGLIDRVI 193
>gi|32266066|ref|NP_860098.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
hepaticus ATCC 51449]
gi|60389734|sp|Q7VIN7.1|CLPP_HELHP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|32262115|gb|AAP77164.1| endopeptidase ClpP [Helicobacter hepaticus ATCC 51449]
Length = 196
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 110/202 (54%), Positives = 145/202 (71%), Gaps = 7/202 (3%)
Query: 89 SPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDA 148
S YIP Y G G R ++ S+L + RII G + D +A+ IVAQLL+L+A
Sbjct: 2 SSYIP-YVIERTGRGE------RSYDIYSRLLKDRIILLSGEINDHIASSIVAQLLFLEA 54
Query: 149 VDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRY 208
DP KDI Y+NSPGG +T+ +I+DT+ +I D+ST+C+G AAS GAFLLS+GTKGKR+
Sbjct: 55 EDPEKDINFYINSPGGVITSAFSIYDTMNYIHSDISTICIGQAASAGAFLLSSGTKGKRF 114
Query: 209 SLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDF 268
SLPNSRIMIHQPLGGAQG +DI++QA E+L K LN ++++TGQ +EKI +DT+RDF
Sbjct: 115 SLPNSRIMIHQPLGGAQGQATDIEIQAREILRLKKILNEIMAHNTGQKIEKITQDTERDF 174
Query: 269 FMSAEEAKDYGLIDGVVMNPHK 290
FMS EEAK YGL+D ++ K
Sbjct: 175 FMSGEEAKKYGLVDEILTKSLK 196
>gi|33865835|ref|NP_897394.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8102]
gi|67460510|sp|Q7U6N7.1|CLPP2_SYNPX RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|33633005|emb|CAE07816.1| ATP-dependent Clp protease proteolytic subunit 1 [Synechococcus sp.
WH 8102]
Length = 197
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 111/172 (64%), Positives = 135/172 (78%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G V D AN IVAQ+L+L+A DP KDI +Y+NSPGGSV G+ IF
Sbjct: 17 DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGSVYDGLGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HI+PDV TVCVGLAASMGAFLL AGTKGKR SL +SRIMIHQPLGGA+G SDI +
Sbjct: 77 DTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQPLGGARGQASDIRI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA+E+L+ K LN LS TGQ L++I +DTDRDFFMS EA +YGLID V+
Sbjct: 137 QADEILYLKERLNQELSDRTGQPLDRIQQDTDRDFFMSPGEAVEYGLIDSVI 188
>gi|419596935|ref|ZP_14131928.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 23341]
gi|419599386|ref|ZP_14134247.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 23342]
gi|419610718|ref|ZP_14144774.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
H8]
gi|380574911|gb|EIA97002.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 23341]
gi|380575198|gb|EIA97282.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 23342]
gi|380589478|gb|EIB10539.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
H8]
Length = 194
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 140/180 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G + D++A IVAQLL+L+A DP KDI +Y+NSPGG +T+G
Sbjct: 15 RSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLYINSPGGVITSGF 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ +I+PDV T+C+G AASMGAFLLS G +GKR++LPNSRIMIHQPLGGA+G +D
Sbjct: 75 SIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRFALPNSRIMIHQPLGGARGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L KA LN L+ +T Q + KI +DT+RDFFMSA+EAK+YGLID V+ K
Sbjct: 135 IEIQAKEILRLKAILNDILAKNTKQKVAKIVKDTERDFFMSAQEAKEYGLIDKVLEKSFK 194
>gi|57168633|ref|ZP_00367765.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
coli RM2228]
gi|305432739|ref|ZP_07401899.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
JV20]
gi|419535913|ref|ZP_14075402.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
111-3]
gi|419543274|ref|ZP_14082351.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2548]
gi|419547562|ref|ZP_14086272.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2680]
gi|419551004|ref|ZP_14089478.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2688]
gi|419558999|ref|ZP_14096828.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
80352]
gi|419609035|ref|ZP_14143208.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
H6]
gi|419613016|ref|ZP_14146876.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
H9]
gi|57019914|gb|EAL56594.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
coli RM2228]
gi|304444248|gb|EFM36901.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
JV20]
gi|380519528|gb|EIA45602.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
111-3]
gi|380520408|gb|EIA46247.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2680]
gi|380520569|gb|EIA46381.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2548]
gi|380529297|gb|EIA54468.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
2688]
gi|380538325|gb|EIA62814.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
80352]
gi|380584611|gb|EIB06026.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
H6]
gi|380588883|gb|EIB09977.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
H9]
Length = 194
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 140/180 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G + D++A IVAQLL+L+A DP KDI +Y+NSPGG +T+G
Sbjct: 15 RSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLYINSPGGVITSGF 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ +I+PDV T+C+G AASMGAFLLS G +GKR++LPNSRIMIHQPLGGA+G +D
Sbjct: 75 SIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRFALPNSRIMIHQPLGGARGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L KA LN L+ +T Q + KI +DT+RDFFMSA+EAK+YGLID V+ K
Sbjct: 135 IEIQAKEILRLKAILNDILAKNTKQKVAKIVKDTERDFFMSAQEAKEYGLIDKVLEKSFK 194
>gi|432532626|ref|ZP_19769626.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE234]
gi|431063818|gb|ELD73032.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE234]
Length = 207
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K ++N ++ HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 152 HAREILKVKGHMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|170718338|ref|YP_001783566.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus somnus
2336]
gi|189082460|sp|B0UW20.1|CLPP_HAES2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|168826467|gb|ACA31838.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
somnus 2336]
Length = 193
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 140/177 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L+A DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKERVIFLTGEVEDRMANLIVAQLLFLEAEDPAKDINIYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+P+V T+C+G A SMGAFLL+ GT GKR +LP++R+MIHQPLGG +G SD
Sbjct: 76 AIYDTMQFIKPNVRTLCIGQACSMGAFLLAGGTAGKRAALPHARVMIHQPLGGFRGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I + A E+L K LN L++HTGQ++E+I +DTDRD FMSAE+AK YGL+D V++
Sbjct: 136 IQIHAQEILKIKQTLNERLAFHTGQSIEQIEQDTDRDNFMSAEQAKLYGLVDDVLIK 192
>gi|60389777|sp|Q891J7.2|CLPP_CLOTE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 194
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 106/176 (60%), Positives = 138/176 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII V D A++IVAQLL+L+A DP+KDI +Y+NSPGGS+T+GM
Sbjct: 16 RSYDIYSRLLKDRIIMLSDQVNDVTASLIVAQLLFLEAEDPDKDIFLYINSPGGSITSGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G+AASMGAFLL+AG KGKR++LPNS IMIHQPLGG QG +D
Sbjct: 76 AIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGFQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVM 286
I + A+ +L K NLN LS TGQ LE I DT+RD FM A +AKDYGLID V++
Sbjct: 136 IGIHADRILKIKQNLNSILSEKTGQPLEVIQRDTERDNFMDANQAKDYGLIDEVMV 191
>gi|258514515|ref|YP_003190737.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum acetoxidans DSM 771]
gi|257778220|gb|ACV62114.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum acetoxidans DSM 771]
Length = 194
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP+ED AN+I+AQLL+L+A DP KDI +Y+NSPGG VTAGM
Sbjct: 17 RSYDIYSRLLKDRIIFIGGPIEDYTANLIIAQLLFLEAEDPEKDIHLYINSPGGVVTAGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+P VST+C+G AASMG+FLL+AG GKR++LP +RIMIHQP GG QG +D
Sbjct: 77 AIYDTMQYIKPPVSTICLGQAASMGSFLLAAGAPGKRFALPYARIMIHQPSGGMQGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN LS HT Q L+KI D++RDFFMSAE+AK+YG+ID +V
Sbjct: 137 IGIHAKEILRMKEILNKLLSKHTKQPLDKITRDSERDFFMSAEDAKEYGIIDQIV 191
>gi|148263972|ref|YP_001230678.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
uraniireducens Rf4]
gi|189082459|sp|A5GFA0.1|CLPP_GEOUR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146397472|gb|ABQ26105.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacter
uraniireducens Rf4]
Length = 199
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ GG ++D ++N+++AQLL+L+A DP+KDI +Y+NSPGG VTAGM
Sbjct: 15 RSYDIYSRLLKDRIVFLGGAIDDAISNLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGM 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+R+I+ VST+CVG AASMGAFLLS G KGKR+SL NSRIMIHQPLGG QG +D
Sbjct: 75 AIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRFSLTNSRIMIHQPLGGFQGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN ++ HTGQ +EK+ DT+RD+FMS E+AK+YG+ID ++
Sbjct: 135 IHIHAQEILRMKKKLNELMAEHTGQPVEKLEADTERDYFMSGEDAKNYGIIDSII 189
>gi|319794078|ref|YP_004155718.1| ATP-dependent clp protease, proteolytic subunit clpp [Variovorax
paradoxus EPS]
gi|315596541|gb|ADU37607.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Variovorax
paradoxus EPS]
Length = 202
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 148/192 (77%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLL---GRFQ---NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
QG G PM++ GR + ++ S+L + RI+ G V D AN++VAQLL+L++ +P K
Sbjct: 7 QGLGMVPMVVEQSGRGERSYDIYSRLLKERIVFLVGEVNDQTANLVVAQLLFLESENPEK 66
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI Y+NSPGGSV+AGMAI+DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+SLPNS
Sbjct: 67 DISFYINSPGGSVSAGMAIYDTMQFIKPDVSTMCLGFAASMGAFLLAAGEKGKRFSLPNS 126
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
++MIHQ LGGA+G +DI++ A ++L K +N L+ TGQ LEK+ DT+RD+F++A+
Sbjct: 127 KVMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPLEKVKTDTERDYFLTAD 186
Query: 274 EAKDYGLIDGVV 285
EAKDYGL+D VV
Sbjct: 187 EAKDYGLVDQVV 198
>gi|238764860|ref|ZP_04625801.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
kristensenii ATCC 33638]
gi|238696967|gb|EEP89743.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
kristensenii ATCC 33638]
Length = 207
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 138/174 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+I AQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++ A E+L K+ +N ++ HTG++LE+I DT+RD F+SAE+A +YGL+D V
Sbjct: 149 IEIHAREILKVKSRMNELMALHTGKSLEEIERDTERDRFLSAEQAVEYGLVDSV 202
>gi|238795542|ref|ZP_04639057.1| ATP-dependent Clp protease proteolytic subunit [Yersinia mollaretii
ATCC 43969]
gi|238720661|gb|EEQ12462.1| ATP-dependent Clp protease proteolytic subunit [Yersinia mollaretii
ATCC 43969]
Length = 194
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 137/174 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+I AQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 16 RSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 76 SIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++ A E+L K+ +N ++ HTG++LE+I DT+RD F+SAEEA YGL+D V
Sbjct: 136 IEIHAREILKVKSRMNELMALHTGKSLEEIERDTERDRFLSAEEAVGYGLVDSV 189
>gi|222110341|ref|YP_002552605.1| ATP-dependent clp protease proteolytic subunit [Acidovorax ebreus
TPSY]
gi|254763789|sp|B9MG14.1|CLPP_DIAST RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|221729785|gb|ACM32605.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
ebreus TPSY]
Length = 202
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 145/192 (75%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
Q G PM++ R ++ S+L + R+I G V D AN++VAQLL+L++ +P+K
Sbjct: 7 QALGMIPMVIEQSGRGERSYDIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLESENPDK 66
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI Y+NSPGGSVTAGMAI+DT++ I+PDVST+C G AASMGAFLL+AG KGKRYSLPNS
Sbjct: 67 DISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCCGFAASMGAFLLAAGAKGKRYSLPNS 126
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
+IMIHQ LGGA+G +DI++ A ++L K +N L+ TGQ +EK+ DT+RD+FM+A+
Sbjct: 127 KIMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPIEKVKADTERDYFMTAD 186
Query: 274 EAKDYGLIDGVV 285
EAKDYG++D V+
Sbjct: 187 EAKDYGIVDQVI 198
>gi|387890168|ref|YP_006320466.1| ATP-dependent Clp protease proteolytic subunit [Escherichia blattae
DSM 4481]
gi|414595522|ref|ZP_11445141.1| ATP-dependent Clp protease proteolytic subunit [Escherichia blattae
NBRC 105725]
gi|386925001|gb|AFJ47955.1| ATP-dependent Clp protease proteolytic subunit [Escherichia blattae
DSM 4481]
gi|403193485|dbj|GAB82793.1| ATP-dependent Clp protease proteolytic subunit [Escherichia blattae
NBRC 105725]
Length = 207
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ HTG+ LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 149 IEIHAKEILKVKARMNELMAKHTGKPLEQIENDTERDRFLSASEAVEYGLVDSIL 203
>gi|18310375|ref|NP_562309.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens str. 13]
gi|110799833|ref|YP_696088.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens ATCC 13124]
gi|110803073|ref|YP_698704.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens SM101]
gi|168207806|ref|ZP_02633811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens E str. JGS1987]
gi|168212102|ref|ZP_02637727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens B str. ATCC 3626]
gi|168215325|ref|ZP_02640950.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens CPE str. F4969]
gi|168217824|ref|ZP_02643449.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens NCTC 8239]
gi|169342288|ref|ZP_02863366.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens C str. JGS1495]
gi|182627116|ref|ZP_02954834.1| CAAX amino terminal protease family protein [Clostridium
perfringens D str. JGS1721]
gi|422346059|ref|ZP_16426973.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens WAL-14572]
gi|422874317|ref|ZP_16920802.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens F262]
gi|21759067|sp|Q8XKK1.1|CLPP_CLOPE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|123146116|sp|Q0ST53.1|CLPP_CLOPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|123148745|sp|Q0TQK2.1|CLPP_CLOP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|18145055|dbj|BAB81099.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens str. 13]
gi|110674480|gb|ABG83467.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens ATCC 13124]
gi|110683574|gb|ABG86944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens SM101]
gi|169299615|gb|EDS81674.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens C str. JGS1495]
gi|170660863|gb|EDT13546.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens E str. JGS1987]
gi|170709986|gb|EDT22168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens B str. ATCC 3626]
gi|170713287|gb|EDT25469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens CPE str. F4969]
gi|177907505|gb|EDT70163.1| CAAX amino terminal protease family protein [Clostridium
perfringens D str. JGS1721]
gi|182380151|gb|EDT77630.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens NCTC 8239]
gi|373226681|gb|EHP49003.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens WAL-14572]
gi|380304794|gb|EIA17080.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens F262]
Length = 194
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D AN++VAQLL+L++ DP+KDI +Y+NSPGGS+T+GM
Sbjct: 17 RSYDIFSRLLKDRIIMLSGEVNDVTANLVVAQLLFLESEDPDKDIHLYINSPGGSITSGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G+AASMGAFLLS+G KGKR++LPN+ IMIHQPLGG QG +D
Sbjct: 77 AIYDTMQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFALPNAEIMIHQPLGGFQGQATD 136
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
ID+ A +L K LN LS +T Q LEKI D +RD+FM A EA +YGLID V+
Sbjct: 137 IDIHAKRILKIKDKLNQILSENTNQPLEKIKVDVERDYFMEASEAVEYGLIDKVI 191
>gi|56964790|ref|YP_176521.1| ATP-dependent Clp protease proteolytic subunit [Bacillus clausii
KSM-K16]
gi|67460456|sp|Q5WDK0.1|CLPP2_BACSK RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|56911033|dbj|BAD65560.1| ATP-dependent Clp protease proteolytic subunit [Bacillus clausii
KSM-K16]
Length = 195
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 139/180 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V+D++AN IVAQ+L+L A DP KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIMLGSGVDDNVANSIVAQMLFLQAEDPEKDISLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C+G+AASMGAFLL+AG KGKR +LPNS +MIHQPLGG QG +D
Sbjct: 76 AIYDTMQFIKPDVSTICIGMAASMGAFLLTAGAKGKRMALPNSEVMIHQPLGGMQGQAAD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
+++ A ++ + LN ++ +GQ E+I DTDRD FM+AE+AK+YGLID V+ P K
Sbjct: 136 MEIHARRIIQMREKLNQIMAERSGQPYERIARDTDRDNFMTAEQAKEYGLIDKVIETPTK 195
>gi|294627913|ref|ZP_06706492.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292597827|gb|EFF41985.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
Length = 208
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 107/185 (57%), Positives = 143/185 (77%), Gaps = 1/185 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S L + R+I GP++D MAN+IVAQLL+L+A +P KDI +Y+NSPGG VTAGM
Sbjct: 23 RAYDIYSCLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGM 82
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG AASMGA LL++G GKRY+LPNSR+MIHQPLGG QG +D
Sbjct: 83 AIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATD 142
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV-MNPH 289
ID+ A E+L ++ LN L+ HTGQ+LE I DT+RD F SA +A+ YGL+D V+ P
Sbjct: 143 IDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFKSAVDAQAYGLVDQVLERRPE 202
Query: 290 KILQP 294
+ +QP
Sbjct: 203 ESIQP 207
>gi|147677139|ref|YP_001211354.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum
thermopropionicum SI]
gi|259585961|sp|A5D447.1|CLPP_PELTS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146273236|dbj|BAF58985.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum
thermopropionicum SI]
Length = 194
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 102/174 (58%), Positives = 138/174 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGP++D+ AN+I+AQ+L+L+A DP KDI Y+NSPGG VTAGM
Sbjct: 16 RAYDIYSRLLKDRIIFLGGPIDDNTANLIIAQMLFLEAEDPEKDIQFYINSPGGVVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++++R V+T+C+G AASM + LL+AG KGKRYSLP +RI+IHQPLGG QG +D
Sbjct: 76 AIYDTMQYVRSPVATICIGQAASMASLLLAAGAKGKRYSLPYARILIHQPLGGVQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++ A E+L + LN LS HTGQ +EKI DT+RD+FMSA+EAK+YG+ID V
Sbjct: 136 IEIHAKEILRMRQFLNEILSRHTGQPIEKIARDTERDYFMSAQEAKEYGIIDEV 189
>gi|419389854|ref|ZP_13930693.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15A]
gi|419395026|ref|ZP_13935811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15B]
gi|419400377|ref|ZP_13941111.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15C]
gi|419405549|ref|ZP_13946253.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15D]
gi|419411043|ref|ZP_13951716.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15E]
gi|378244656|gb|EHY04598.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15A]
gi|378251878|gb|EHY11774.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15B]
gi|378252208|gb|EHY12102.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15C]
gi|378257938|gb|EHY17774.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15D]
gi|378261234|gb|EHY21029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15E]
Length = 207
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 138/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N ++ HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|387131588|ref|YP_006294478.1| ATP-dependent Clp protease proteolytic subunit [Methylophaga sp.
JAM7]
gi|386272877|gb|AFJ03791.1| ATP-dependent Clp protease proteolytic subunit [Methylophaga sp.
JAM7]
Length = 211
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L++ +P+KDI +Y+NSPGG+VTAG+
Sbjct: 29 RSYDIYSRLLKERVIFLVGQVEDHMANLIVAQLLFLESENPDKDIHLYINSPGGAVTAGL 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C+G AASMGA LL+AG GKR++LPNSR+M+HQPLGG QG SD
Sbjct: 89 AIYDTMQFIKPDVSTLCIGQAASMGALLLTAGAAGKRFALPNSRMMVHQPLGGFQGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
ID+ A E+L + LN +S+HTGQ +E+I +DTDRD FM+ E+A YGLID V+
Sbjct: 149 IDIHAKEILSIRDRLNRIMSHHTGQKIEQIEKDTDRDNFMNGEQAAKYGLIDSVL 203
>gi|291277236|ref|YP_003517008.1| ATP-dependent clp protease proteolytic subunit [Helicobacter
mustelae 12198]
gi|290964430|emb|CBG40280.1| ATP-dependent clp protease proteolytic subunit [Helicobacter
mustelae 12198]
Length = 195
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 111/200 (55%), Positives = 146/200 (73%), Gaps = 7/200 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
YIP Y G G R ++ S+L + RI+ G + D +A+ IVAQLL+L+A D
Sbjct: 3 YIP-YVIERTGKGE------RSYDIYSRLLKDRIVLLSGEINDMVASSIVAQLLFLEAED 55
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
KDI Y+NSPGG+VT+ +I+DT+ +IRPDV+T+CVG AAS GA LLS+G KGKRYSL
Sbjct: 56 AQKDIYFYINSPGGAVTSAFSIYDTMHYIRPDVATICVGQAASAGALLLSSGAKGKRYSL 115
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
PNSRIMIHQPLGGAQG +DI++QANE+L K LN L+ +TGQ+L+K+++DT+RDFFM
Sbjct: 116 PNSRIMIHQPLGGAQGQATDIEIQANEILRLKKILNEILASNTGQSLKKVSQDTERDFFM 175
Query: 271 SAEEAKDYGLIDGVVMNPHK 290
SA EA+ YGL+D V+ K
Sbjct: 176 SAMEAQKYGLVDKVLEKSLK 195
>gi|170767754|ref|ZP_02902207.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
albertii TW07627]
gi|170123242|gb|EDS92173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
albertii TW07627]
Length = 207
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 138/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N ++ HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|238783609|ref|ZP_04627630.1| ATP-dependent Clp protease proteolytic subunit [Yersinia bercovieri
ATCC 43970]
gi|238715487|gb|EEQ07478.1| ATP-dependent Clp protease proteolytic subunit [Yersinia bercovieri
ATCC 43970]
Length = 207
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 137/174 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+I AQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++ A E+L K+ +N ++ HTG++LE+I DT+RD F+SAEEA YGL+D V
Sbjct: 149 IEIHAREILKVKSRMNELMALHTGKSLEEIERDTERDRFLSAEEAVGYGLVDSV 202
>gi|159903385|ref|YP_001550729.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9211]
gi|159888561|gb|ABX08775.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9211]
Length = 196
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 108/171 (63%), Positives = 135/171 (78%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G PV +D AN IVAQLL+L+A DP KDI +Y+NSPGGSV G+ IF
Sbjct: 17 DIYSRLLRERIIFLGEPVTNDSANRIVAQLLFLEAEDPEKDIFLYINSPGGSVYDGLGIF 76
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DTI H++PDV TVCVGLAASMGAFLL AG KGKR SL +SRIMIHQPLGGA+G SDI +
Sbjct: 77 DTIEHVKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLKHSRIMIHQPLGGARGQASDIRI 136
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
QA+E+L K LN L+ TGQ +E+I++DTDRDF+MS +EA +YG+ID +
Sbjct: 137 QADEILFLKDRLNNELAERTGQPIERISQDTDRDFYMSPDEALEYGIIDNI 187
>gi|15800167|ref|NP_286179.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. EDL933]
gi|15829745|ref|NP_308518.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. Sakai]
gi|16128422|ref|NP_414971.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. MG1655]
gi|26246448|ref|NP_752487.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
CFT073]
gi|30061939|ref|NP_836110.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
2a str. 2457T]
gi|56479658|ref|NP_706331.2| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
2a str. 301]
gi|74311012|ref|YP_309431.1| ATP-dependent Clp protease proteolytic subunit [Shigella sonnei
Ss046]
gi|82542925|ref|YP_406872.1| ATP-dependent Clp protease proteolytic subunit [Shigella boydii
Sb227]
gi|82775656|ref|YP_402003.1| ATP-dependent Clp protease proteolytic subunit [Shigella
dysenteriae Sd197]
gi|91209511|ref|YP_539497.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
UTI89]
gi|110640698|ref|YP_668426.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
536]
gi|110804465|ref|YP_687985.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri 5
str. 8401]
gi|117622697|ref|YP_851610.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
APEC O1]
gi|157158299|ref|YP_001461624.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
E24377A]
gi|157159964|ref|YP_001457282.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
HS]
gi|168754541|ref|ZP_02779548.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4401]
gi|168768391|ref|ZP_02793398.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4486]
gi|168778128|ref|ZP_02803135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4196]
gi|168778929|ref|ZP_02803936.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4076]
gi|168786287|ref|ZP_02811294.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC869]
gi|170021190|ref|YP_001726144.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
ATCC 8739]
gi|170080023|ref|YP_001729343.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
str. K-12 substr. DH10B]
gi|170683276|ref|YP_001742581.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SMS-3-5]
gi|187731303|ref|YP_001879148.1| ATP-dependent Clp protease proteolytic subunit [Shigella boydii CDC
3083-94]
gi|188492597|ref|ZP_02999867.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 53638]
gi|191174674|ref|ZP_03036146.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli F11]
gi|193064129|ref|ZP_03045213.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli E22]
gi|195938496|ref|ZP_03083878.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. EC4024]
gi|208809540|ref|ZP_03251877.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4206]
gi|208815859|ref|ZP_03257038.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4045]
gi|208822964|ref|ZP_03263282.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4042]
gi|209917654|ref|YP_002291738.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SE11]
gi|215485518|ref|YP_002327949.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O127:H6 str. E2348/69]
gi|217326412|ref|ZP_03442496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. TW14588]
gi|218549895|ref|YP_002383686.1| ATP-dependent Clp protease proteolytic subunit [Escherichia
fergusonii ATCC 35469]
gi|218553004|ref|YP_002385917.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
IAI1]
gi|218557347|ref|YP_002390260.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
S88]
gi|218688301|ref|YP_002396513.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
ED1a]
gi|218693900|ref|YP_002401567.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
55989]
gi|218698651|ref|YP_002406280.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
IAI39]
gi|218703721|ref|YP_002411240.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
UMN026]
gi|222155227|ref|YP_002555366.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
LF82]
gi|227884552|ref|ZP_04002357.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
83972]
gi|238899725|ref|YP_002925521.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
BW2952]
gi|251783945|ref|YP_002998249.1| clpP, subunit of ClpP serine protease, ClpAP, ClpXP and ClpAXP
[Escherichia coli BL21(DE3)]
gi|253774574|ref|YP_003037405.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160506|ref|YP_003043614.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli B
str. REL606]
gi|254287310|ref|YP_003053058.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
BL21(DE3)]
gi|254791621|ref|YP_003076458.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. TW14359]
gi|260842638|ref|YP_003220416.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H2 str. 12009]
gi|260853660|ref|YP_003227551.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. 11368]
gi|260866598|ref|YP_003233000.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H- str. 11128]
gi|261223919|ref|ZP_05938200.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O157:H7 str. FRIK2000]
gi|261256367|ref|ZP_05948900.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. FRIK966]
gi|291281344|ref|YP_003498162.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. CB9615]
gi|293403558|ref|ZP_06647649.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
FVEC1412]
gi|293408587|ref|ZP_06652426.1| Clp protease [Escherichia coli B354]
gi|297516115|ref|ZP_06934501.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
OP50]
gi|298379170|ref|ZP_06989051.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
FVEC1302]
gi|300818231|ref|ZP_07098442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 107-1]
gi|300820317|ref|ZP_07100469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 119-7]
gi|300903295|ref|ZP_07121223.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 84-1]
gi|300918180|ref|ZP_07134787.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 115-1]
gi|300930260|ref|ZP_07145673.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 187-1]
gi|300947910|ref|ZP_07162058.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 116-1]
gi|301025667|ref|ZP_07189185.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 196-1]
gi|301330696|ref|ZP_07223298.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 78-1]
gi|306813096|ref|ZP_07447289.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
NC101]
gi|307312185|ref|ZP_07591821.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli W]
gi|309794830|ref|ZP_07689251.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 145-7]
gi|331640957|ref|ZP_08342092.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H736]
gi|331645613|ref|ZP_08346717.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli M605]
gi|331651375|ref|ZP_08352400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli M718]
gi|331656494|ref|ZP_08357456.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA206]
gi|331661818|ref|ZP_08362741.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA143]
gi|331666792|ref|ZP_08367666.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA271]
gi|331671984|ref|ZP_08372780.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA280]
gi|331676109|ref|ZP_08376821.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H591]
gi|331681832|ref|ZP_08382465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H299]
gi|366160317|ref|ZP_09460179.1| ATP-dependent Clp protease proteolytic subunit [Escherichia sp.
TW09308]
gi|378714157|ref|YP_005279050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli KO11FL]
gi|383177027|ref|YP_005455032.1| ATP-dependent Clp protease proteolytic subunit [Shigella sonnei
53G]
gi|384541993|ref|YP_005726054.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
2002017]
gi|386596687|ref|YP_006093087.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DH1]
gi|386598154|ref|YP_006099660.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli IHE3034]
gi|386605609|ref|YP_006111909.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
UM146]
gi|386607800|ref|YP_006123286.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli W]
gi|386622809|ref|YP_006142537.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O7:K1 str. CE10]
gi|386628026|ref|YP_006147746.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
str. 'clone D i2']
gi|386632946|ref|YP_006152665.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
str. 'clone D i14']
gi|386637852|ref|YP_006104650.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
ABU 83972]
gi|386702756|ref|YP_006166593.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KO11FL]
gi|386703656|ref|YP_006167503.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
P12b]
gi|386708240|ref|YP_006171961.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli W]
gi|387505454|ref|YP_006157710.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. RM12579]
gi|387605947|ref|YP_006094803.1| ATP-dependent clp protease proteolytic subunit [Escherichia coli
042]
gi|387610962|ref|YP_006114078.1| ATP-dependent clp protease proteolytic subunit [Escherichia coli
ETEC H10407]
gi|387615754|ref|YP_006118776.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O83:H1 str. NRG 857C]
gi|387620196|ref|YP_006127823.1| hypothetical protein ECDH1ME8569_0422 [Escherichia coli DH1]
gi|387828451|ref|YP_003348388.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SE15]
gi|387881033|ref|YP_006311335.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
Xuzhou21]
gi|388476543|ref|YP_488729.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. W3110]
gi|404373759|ref|ZP_10978994.1| ATP-dependent Clp protease proteolytic subunit [Escherichia sp.
1_1_43]
gi|407467887|ref|YP_006785671.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|407483383|ref|YP_006780532.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2011C-3493]
gi|410483936|ref|YP_006771482.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|416273477|ref|ZP_11643392.1| ATP-dependent Clp protease proteolytic subunit [Shigella
dysenteriae CDC 74-1112]
gi|416287650|ref|ZP_11648936.1| ATP-dependent Clp protease proteolytic subunit [Shigella boydii
ATCC 9905]
gi|416296133|ref|ZP_11651339.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
CDC 796-83]
gi|416312992|ref|ZP_11657927.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. 1044]
gi|416316808|ref|ZP_11659940.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. EC1212]
gi|416325624|ref|ZP_11666032.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. 1125]
gi|416334479|ref|ZP_11671387.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
WV_060327]
gi|416341381|ref|ZP_11676004.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
EC4100B]
gi|416780506|ref|ZP_11876892.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. G5101]
gi|416791657|ref|ZP_11881790.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H- str. 493-89]
gi|416803300|ref|ZP_11886651.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H- str. H 2687]
gi|416811871|ref|ZP_11890144.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. 3256-97]
gi|416822832|ref|ZP_11895159.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. USDA 5905]
gi|416835006|ref|ZP_11901254.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. LSU-61]
gi|417082904|ref|ZP_11951073.1| hypothetical protein i01_00596 [Escherichia coli cloneA_i1]
gi|417114443|ref|ZP_11965714.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1.2741]
gi|417121175|ref|ZP_11970629.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 97.0246]
gi|417134652|ref|ZP_11979437.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5.0588]
gi|417139755|ref|ZP_11983177.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 97.0259]
gi|417144466|ref|ZP_11986272.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1.2264]
gi|417152903|ref|ZP_11991694.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 96.0497]
gi|417168750|ref|ZP_12001201.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 99.0741]
gi|417174458|ref|ZP_12004254.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.2608]
gi|417179207|ref|ZP_12007307.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 93.0624]
gi|417190845|ref|ZP_12013441.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 4.0522]
gi|417218290|ref|ZP_12023892.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli JB1-95]
gi|417225434|ref|ZP_12028725.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 96.154]
gi|417247136|ref|ZP_12040237.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 9.0111]
gi|417253476|ref|ZP_12045235.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 4.0967]
gi|417260673|ref|ZP_12048171.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2.3916]
gi|417267200|ref|ZP_12054561.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.3884]
gi|417270620|ref|ZP_12057973.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2.4168]
gi|417275444|ref|ZP_12062781.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.2303]
gi|417284212|ref|ZP_12071507.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3003]
gi|417288247|ref|ZP_12075532.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW07793]
gi|417293158|ref|ZP_12080438.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli B41]
gi|417299495|ref|ZP_12086725.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 900105 (10e)]
gi|417306939|ref|ZP_12093819.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
PCN033]
gi|417661013|ref|ZP_12310594.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
AA86]
gi|417754233|ref|ZP_12402328.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2B]
gi|417803792|ref|ZP_12450827.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. LB226692]
gi|417826439|ref|ZP_12473017.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri J1713]
gi|417831544|ref|ZP_12478066.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 01-09591]
gi|417867743|ref|ZP_12512778.1| hypothetical protein C22711_4669 [Escherichia coli O104:H4 str.
C227-11]
gi|417945744|ref|ZP_12588973.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
XH140A]
gi|417976590|ref|ZP_12617382.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
XH001]
gi|418253617|ref|ZP_12878642.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 6603-63]
gi|418262477|ref|ZP_12883856.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei str. Moseley]
gi|418941047|ref|ZP_13494387.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H43 str. T22]
gi|419000594|ref|ZP_13548156.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1B]
gi|419006128|ref|ZP_13553584.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1C]
gi|419011995|ref|ZP_13559360.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1D]
gi|419016899|ref|ZP_13564225.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1E]
gi|419022590|ref|ZP_13569832.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2A]
gi|419027401|ref|ZP_13574601.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2C]
gi|419033183|ref|ZP_13580281.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2D]
gi|419038181|ref|ZP_13585241.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2E]
gi|419043480|ref|ZP_13590454.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3A]
gi|419055094|ref|ZP_13601952.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3C]
gi|419060688|ref|ZP_13607473.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3D]
gi|419066566|ref|ZP_13613247.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3E]
gi|419073638|ref|ZP_13619211.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3F]
gi|419078751|ref|ZP_13624236.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4A]
gi|419084402|ref|ZP_13629818.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4B]
gi|419096498|ref|ZP_13641742.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4D]
gi|419102072|ref|ZP_13647239.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4E]
gi|419107525|ref|ZP_13652635.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4F]
gi|419113292|ref|ZP_13658327.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5A]
gi|419118878|ref|ZP_13663863.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5B]
gi|419124476|ref|ZP_13669380.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5C]
gi|419130098|ref|ZP_13674951.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5D]
gi|419134856|ref|ZP_13679665.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5E]
gi|419140968|ref|ZP_13685725.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6A]
gi|419152270|ref|ZP_13696858.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6C]
gi|419157778|ref|ZP_13702304.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6D]
gi|419162710|ref|ZP_13707190.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6E]
gi|419168433|ref|ZP_13712831.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7A]
gi|419173782|ref|ZP_13717638.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7B]
gi|419179426|ref|ZP_13723051.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7C]
gi|419184984|ref|ZP_13728506.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7D]
gi|419190232|ref|ZP_13733700.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7E]
gi|419195534|ref|ZP_13738942.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8A]
gi|419201573|ref|ZP_13744801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8B]
gi|419207438|ref|ZP_13750566.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8C]
gi|419213878|ref|ZP_13756910.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8D]
gi|419219702|ref|ZP_13762659.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8E]
gi|419225166|ref|ZP_13768056.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9A]
gi|419230910|ref|ZP_13773702.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9B]
gi|419236285|ref|ZP_13779036.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9C]
gi|419241879|ref|ZP_13784529.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9D]
gi|419247288|ref|ZP_13789903.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9E]
gi|419253064|ref|ZP_13795614.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10A]
gi|419259073|ref|ZP_13801533.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10B]
gi|419265176|ref|ZP_13807563.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10C]
gi|419270761|ref|ZP_13813094.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10D]
gi|419276559|ref|ZP_13818829.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10E]
gi|419282161|ref|ZP_13824383.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10F]
gi|419287902|ref|ZP_13830020.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11A]
gi|419293241|ref|ZP_13835302.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11B]
gi|419298681|ref|ZP_13840699.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11C]
gi|419304965|ref|ZP_13846879.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11D]
gi|419309990|ref|ZP_13851867.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11E]
gi|419315309|ref|ZP_13857137.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12A]
gi|419321085|ref|ZP_13862828.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12B]
gi|419327332|ref|ZP_13868965.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12C]
gi|419332742|ref|ZP_13874306.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12D]
gi|419339678|ref|ZP_13881155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12E]
gi|419344085|ref|ZP_13885469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13A]
gi|419353421|ref|ZP_13894707.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13C]
gi|419358764|ref|ZP_13899995.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13D]
gi|419363857|ref|ZP_13905039.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13E]
gi|419368721|ref|ZP_13909850.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14A]
gi|419373906|ref|ZP_13914962.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14B]
gi|419379324|ref|ZP_13920305.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14C]
gi|419384580|ref|ZP_13925484.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14D]
gi|419699353|ref|ZP_14226969.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SCI-07]
gi|419811819|ref|ZP_14336691.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O32:H37 str. P4]
gi|419862464|ref|ZP_14385069.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H25 str. CVM9340]
gi|419867899|ref|ZP_14390213.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H2 str. CVM9450]
gi|419876969|ref|ZP_14398628.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9534]
gi|419882604|ref|ZP_14403814.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9545]
gi|419888442|ref|ZP_14408949.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9570]
gi|419893037|ref|ZP_14413043.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9574]
gi|419900593|ref|ZP_14420019.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM9942]
gi|419906391|ref|ZP_14425303.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O26:H11 str. CVM10026]
gi|419915478|ref|ZP_14433843.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KD1]
gi|419916845|ref|ZP_14435129.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KD2]
gi|419923190|ref|ZP_14441152.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
541-15]
gi|419928055|ref|ZP_14445775.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
541-1]
gi|419937108|ref|ZP_14454024.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
576-1]
gi|419945558|ref|ZP_14461997.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
HM605]
gi|419948924|ref|ZP_14465187.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
CUMT8]
gi|420088256|ref|ZP_14600160.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9602]
gi|420092934|ref|ZP_14604624.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9634]
gi|420103064|ref|ZP_14613978.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9455]
gi|420109693|ref|ZP_14619793.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9553]
gi|420113374|ref|ZP_14623117.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10021]
gi|420119640|ref|ZP_14628905.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10030]
gi|420125718|ref|ZP_14634509.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10224]
gi|420130828|ref|ZP_14639308.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM9952]
gi|420267737|ref|ZP_14770144.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA22]
gi|420278960|ref|ZP_14781227.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW06591]
gi|420284842|ref|ZP_14787060.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW10246]
gi|420290573|ref|ZP_14792738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW11039]
gi|420296234|ref|ZP_14798331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09109]
gi|420302234|ref|ZP_14804266.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW10119]
gi|420307840|ref|ZP_14809814.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1738]
gi|420313332|ref|ZP_14815240.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1734]
gi|420318881|ref|ZP_14820738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2850-71]
gi|420324044|ref|ZP_14825830.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri CCH060]
gi|420329691|ref|ZP_14831396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-1770]
gi|420334604|ref|ZP_14836226.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-315]
gi|420340003|ref|ZP_14841530.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-404]
gi|420351206|ref|ZP_14852405.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 4444-74]
gi|420357063|ref|ZP_14858079.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 3226-85]
gi|420361980|ref|ZP_14862906.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 4822-66]
gi|420378645|ref|ZP_14878144.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 225-75]
gi|420384075|ref|ZP_14883463.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPECa12]
gi|420389777|ref|ZP_14889050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPEC C342-62]
gi|421681140|ref|ZP_16120970.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 1485-80]
gi|421777839|ref|ZP_16214429.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
AD30]
gi|421810660|ref|ZP_16246471.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0416]
gi|421816753|ref|ZP_16252316.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0821]
gi|421822138|ref|ZP_16257576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK920]
gi|421828871|ref|ZP_16264201.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA7]
gi|422330694|ref|ZP_16411711.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
4_1_47FAA]
gi|422748496|ref|ZP_16802409.1| Clp protease [Escherichia coli H252]
gi|422753090|ref|ZP_16806917.1| Clp protease [Escherichia coli H263]
gi|422763232|ref|ZP_16816987.1| Clp protease [Escherichia coli E1167]
gi|422764968|ref|ZP_16818695.1| Clp protease [Escherichia coli E1520]
gi|422769666|ref|ZP_16823357.1| Clp protease [Escherichia coli E482]
gi|422777134|ref|ZP_16830787.1| Clp protease [Escherichia coli H120]
gi|422782770|ref|ZP_16835555.1| Clp protease [Escherichia coli TW10509]
gi|422785047|ref|ZP_16837786.1| Clp protease [Escherichia coli H489]
gi|422791245|ref|ZP_16843948.1| Clp protease [Escherichia coli TA007]
gi|422802318|ref|ZP_16850812.1| Clp protease [Escherichia coli M863]
gi|422804516|ref|ZP_16852948.1| Clp protease [Escherichia fergusonii B253]
gi|422816451|ref|ZP_16864666.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
M919]
gi|422830602|ref|ZP_16878758.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
B093]
gi|422835147|ref|ZP_16883204.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
E101]
gi|422838959|ref|ZP_16886931.1| Clp protease [Escherichia coli H397]
gi|422960324|ref|ZP_16971772.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
H494]
gi|422974758|ref|ZP_16976459.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
TA124]
gi|422991153|ref|ZP_16981924.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. C227-11]
gi|422993092|ref|ZP_16983856.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. C236-11]
gi|422998303|ref|ZP_16989059.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 09-7901]
gi|423006764|ref|ZP_16997507.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 04-8351]
gi|423008407|ref|ZP_16999145.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-3677]
gi|423022594|ref|ZP_17013297.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4404]
gi|423027748|ref|ZP_17018441.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4522]
gi|423033585|ref|ZP_17024269.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4623]
gi|423036451|ref|ZP_17027125.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|423041571|ref|ZP_17032238.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|423048257|ref|ZP_17038914.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|423051841|ref|ZP_17040649.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|423058806|ref|ZP_17047602.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|423652932|ref|ZP_17628235.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA31]
gi|423701218|ref|ZP_17675677.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
H730]
gi|423710208|ref|ZP_17684558.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
B799]
gi|424075299|ref|ZP_17812663.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA505]
gi|424081627|ref|ZP_17818503.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA517]
gi|424088248|ref|ZP_17824523.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1996]
gi|424113671|ref|ZP_17847839.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA3]
gi|424132076|ref|ZP_17864895.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA10]
gi|424145062|ref|ZP_17876849.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA15]
gi|424151208|ref|ZP_17882479.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA24]
gi|424184946|ref|ZP_17887912.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA25]
gi|424266451|ref|ZP_17893814.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA28]
gi|424421800|ref|ZP_17899543.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA32]
gi|424459914|ref|ZP_17910872.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA39]
gi|424472944|ref|ZP_17922637.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA42]
gi|424478892|ref|ZP_17928155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW07945]
gi|424484962|ref|ZP_17933846.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09098]
gi|424491084|ref|ZP_17939498.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09195]
gi|424498173|ref|ZP_17945463.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4203]
gi|424504402|ref|ZP_17951198.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4196]
gi|424510660|ref|ZP_17956914.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW14313]
gi|424518228|ref|ZP_17962674.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW14301]
gi|424524057|ref|ZP_17968098.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4421]
gi|424530265|ref|ZP_17973911.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4422]
gi|424536239|ref|ZP_17979518.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4013]
gi|424542147|ref|ZP_17984984.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4402]
gi|424548471|ref|ZP_17990695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4439]
gi|424554735|ref|ZP_17996473.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4436]
gi|424561082|ref|ZP_18002383.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4437]
gi|424567110|ref|ZP_18008042.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4448]
gi|424747928|ref|ZP_18176080.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CFSAN001629]
gi|424766683|ref|ZP_18194028.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CFSAN001630]
gi|424768157|ref|ZP_18195449.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CFSAN001632]
gi|424836929|ref|ZP_18261566.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
5a str. M90T]
gi|425095924|ref|ZP_18498965.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 3.4870]
gi|425102063|ref|ZP_18504728.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 5.2239]
gi|425123686|ref|ZP_18525280.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0586]
gi|425129726|ref|ZP_18530842.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.2524]
gi|425136066|ref|ZP_18536805.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0833]
gi|425141966|ref|ZP_18542273.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0869]
gi|425153902|ref|ZP_18553465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA34]
gi|425160351|ref|ZP_18559540.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA506]
gi|425165861|ref|ZP_18564685.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA507]
gi|425178034|ref|ZP_18576103.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1999]
gi|425197263|ref|ZP_18593928.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli NE037]
gi|425209679|ref|ZP_18605430.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA4]
gi|425215719|ref|ZP_18611052.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA23]
gi|425222289|ref|ZP_18617163.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA49]
gi|425228534|ref|ZP_18622945.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA45]
gi|425234834|ref|ZP_18628808.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TT12B]
gi|425240839|ref|ZP_18634489.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MA6]
gi|425246963|ref|ZP_18640187.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5905]
gi|425252694|ref|ZP_18645586.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli CB7326]
gi|425259005|ref|ZP_18651383.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC96038]
gi|425265103|ref|ZP_18657041.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5412]
gi|425281805|ref|ZP_18672926.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW00353]
gi|425292563|ref|ZP_18683162.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA38]
gi|425303944|ref|ZP_18693733.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli N1]
gi|425309306|ref|ZP_18698786.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1735]
gi|425315219|ref|ZP_18704309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1736]
gi|425327464|ref|ZP_18715700.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1846]
gi|425333649|ref|ZP_18721382.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1847]
gi|425340070|ref|ZP_18727325.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1848]
gi|425352161|ref|ZP_18738555.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1850]
gi|425358151|ref|ZP_18744137.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1856]
gi|425364261|ref|ZP_18749824.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1862]
gi|425370706|ref|ZP_18755682.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1864]
gi|425377258|ref|ZP_18761660.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1865]
gi|425383500|ref|ZP_18767391.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1866]
gi|425390200|ref|ZP_18773670.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1868]
gi|425396318|ref|ZP_18779376.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1869]
gi|425402303|ref|ZP_18784919.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1870]
gi|425408844|ref|ZP_18791011.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli NE098]
gi|425415114|ref|ZP_18796764.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK523]
gi|425421050|ref|ZP_18802281.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 0.1288]
gi|425426270|ref|ZP_18807331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 0.1304]
gi|427803504|ref|ZP_18970571.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Escherichia coli chi7122]
gi|427808122|ref|ZP_18975187.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Escherichia coli]
gi|428951073|ref|ZP_19023219.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 88.1042]
gi|428956929|ref|ZP_19028639.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 89.0511]
gi|428963261|ref|ZP_19034457.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.0091]
gi|428969331|ref|ZP_19039973.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.0039]
gi|428975890|ref|ZP_19046071.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.2281]
gi|428981655|ref|ZP_19051401.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 93.0055]
gi|428987879|ref|ZP_19057179.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 93.0056]
gi|428993691|ref|ZP_19062606.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 94.0618]
gi|428999790|ref|ZP_19068308.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0183]
gi|429006032|ref|ZP_19073956.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.1288]
gi|429012377|ref|ZP_19079638.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0943]
gi|429018591|ref|ZP_19085384.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0428]
gi|429030581|ref|ZP_19096467.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0939]
gi|429036767|ref|ZP_19102216.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0932]
gi|429042639|ref|ZP_19107653.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0107]
gi|429048495|ref|ZP_19113155.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0003]
gi|429053858|ref|ZP_19118354.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.1742]
gi|429059551|ref|ZP_19123703.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0007]
gi|429064996|ref|ZP_19128865.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0672]
gi|429071563|ref|ZP_19134920.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0678]
gi|429722633|ref|ZP_19257531.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429774730|ref|ZP_19306733.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02030]
gi|429779993|ref|ZP_19311946.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429784045|ref|ZP_19315958.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02092]
gi|429789383|ref|ZP_19321258.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02093]
gi|429795613|ref|ZP_19327439.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02281]
gi|429801539|ref|ZP_19333317.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02318]
gi|429805171|ref|ZP_19336918.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02913]
gi|429809982|ref|ZP_19341684.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-03439]
gi|429815742|ref|ZP_19347401.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-04080]
gi|429821330|ref|ZP_19352943.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-03943]
gi|429824044|ref|ZP_19355561.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0109]
gi|429830412|ref|ZP_19361279.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0010]
gi|429907004|ref|ZP_19372973.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429911202|ref|ZP_19377158.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429917038|ref|ZP_19382978.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429922076|ref|ZP_19387997.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429927894|ref|ZP_19393800.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429931826|ref|ZP_19397721.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429933428|ref|ZP_19399318.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429939082|ref|ZP_19404956.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429946725|ref|ZP_19412580.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429949357|ref|ZP_19415205.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429957641|ref|ZP_19423470.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec12-0466]
gi|432352100|ref|ZP_19595409.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE2]
gi|432356781|ref|ZP_19600028.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE4]
gi|432361188|ref|ZP_19604385.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE5]
gi|432368416|ref|ZP_19611521.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE10]
gi|432371211|ref|ZP_19614275.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE11]
gi|432375520|ref|ZP_19618534.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE12]
gi|432380065|ref|ZP_19623029.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE15]
gi|432385894|ref|ZP_19628793.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE16]
gi|432390365|ref|ZP_19633229.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE21]
gi|432396311|ref|ZP_19639103.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE25]
gi|432400549|ref|ZP_19643309.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE26]
gi|432405307|ref|ZP_19648030.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE28]
gi|432410506|ref|ZP_19653189.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE39]
gi|432415389|ref|ZP_19658020.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE44]
gi|432420547|ref|ZP_19663105.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE178]
gi|432429586|ref|ZP_19672046.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE181]
gi|432430553|ref|ZP_19672998.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE187]
gi|432435082|ref|ZP_19677483.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE188]
gi|432439750|ref|ZP_19682113.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE189]
gi|432444874|ref|ZP_19687183.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE191]
gi|432453235|ref|ZP_19695475.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE193]
gi|432455365|ref|ZP_19697567.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE201]
gi|432459408|ref|ZP_19701572.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE204]
gi|432464449|ref|ZP_19706557.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE205]
gi|432469870|ref|ZP_19711923.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE206]
gi|432474457|ref|ZP_19716470.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE208]
gi|432479798|ref|ZP_19721763.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE210]
gi|432484165|ref|ZP_19726089.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE212]
gi|432492733|ref|ZP_19734572.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE213]
gi|432494306|ref|ZP_19736124.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE214]
gi|432498681|ref|ZP_19740461.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE216]
gi|432503145|ref|ZP_19744882.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE220]
gi|432512645|ref|ZP_19749888.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE224]
gi|432521074|ref|ZP_19758239.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE228]
gi|432522590|ref|ZP_19759729.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE230]
gi|432529805|ref|ZP_19766849.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE233]
gi|432541291|ref|ZP_19778166.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE235]
gi|432541813|ref|ZP_19778674.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE236]
gi|432547157|ref|ZP_19783954.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE237]
gi|432552445|ref|ZP_19789177.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE47]
gi|432557454|ref|ZP_19794147.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE49]
gi|432562347|ref|ZP_19798974.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE51]
gi|432567276|ref|ZP_19803803.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE53]
gi|432572432|ref|ZP_19808923.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE55]
gi|432579114|ref|ZP_19815548.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE56]
gi|432582548|ref|ZP_19818958.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE57]
gi|432586736|ref|ZP_19823108.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE58]
gi|432591556|ref|ZP_19827885.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE60]
gi|432596322|ref|ZP_19832611.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE62]
gi|432600954|ref|ZP_19837209.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE66]
gi|432606322|ref|ZP_19842518.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE67]
gi|432610171|ref|ZP_19846344.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE72]
gi|432615211|ref|ZP_19851346.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE75]
gi|432620540|ref|ZP_19856586.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE76]
gi|432626021|ref|ZP_19862006.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE77]
gi|432630007|ref|ZP_19865957.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE80]
gi|432635751|ref|ZP_19871637.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE81]
gi|432639556|ref|ZP_19875401.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE83]
gi|432644872|ref|ZP_19880675.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE86]
gi|432649965|ref|ZP_19885727.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE87]
gi|432654447|ref|ZP_19890166.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE93]
gi|432659679|ref|ZP_19895340.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE111]
gi|432664625|ref|ZP_19900221.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE116]
gi|432669369|ref|ZP_19904918.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE119]
gi|432678032|ref|ZP_19913458.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE142]
gi|432678859|ref|ZP_19914262.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE143]
gi|432684270|ref|ZP_19919589.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE156]
gi|432690327|ref|ZP_19925573.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE161]
gi|432693221|ref|ZP_19928436.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE162]
gi|432697754|ref|ZP_19932926.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE169]
gi|432703009|ref|ZP_19938135.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE171]
gi|432709268|ref|ZP_19944337.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE6]
gi|432712158|ref|ZP_19947210.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE8]
gi|432717449|ref|ZP_19952451.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE9]
gi|432722000|ref|ZP_19956927.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE17]
gi|432726546|ref|ZP_19961429.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE18]
gi|432731162|ref|ZP_19966001.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE45]
gi|432735963|ref|ZP_19970739.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE42]
gi|432740233|ref|ZP_19974955.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE23]
gi|432744374|ref|ZP_19979079.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE43]
gi|432748893|ref|ZP_19983516.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE29]
gi|432753234|ref|ZP_19987802.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE22]
gi|432758222|ref|ZP_19992745.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE46]
gi|432763728|ref|ZP_19998180.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE48]
gi|432769238|ref|ZP_20003611.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE50]
gi|432773617|ref|ZP_20007907.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE54]
gi|432777289|ref|ZP_20011543.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE59]
gi|432782345|ref|ZP_20016531.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE63]
gi|432786085|ref|ZP_20020253.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE65]
gi|432791686|ref|ZP_20025780.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE78]
gi|432797653|ref|ZP_20031681.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE79]
gi|432800720|ref|ZP_20034710.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE84]
gi|432804518|ref|ZP_20038464.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE91]
gi|432812549|ref|ZP_20046398.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE101]
gi|432813933|ref|ZP_20047744.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE115]
gi|432819756|ref|ZP_20053470.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE118]
gi|432825885|ref|ZP_20059542.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE123]
gi|432830425|ref|ZP_20064034.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE135]
gi|432833493|ref|ZP_20067041.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE136]
gi|432837986|ref|ZP_20071479.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE140]
gi|432842724|ref|ZP_20076145.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE141]
gi|432848215|ref|ZP_20080087.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE144]
gi|432859093|ref|ZP_20085267.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE146]
gi|432873099|ref|ZP_20092797.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE147]
gi|432879929|ref|ZP_20096749.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE154]
gi|432884403|ref|ZP_20099359.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE158]
gi|432893053|ref|ZP_20105158.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE165]
gi|432897224|ref|ZP_20108220.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE192]
gi|432902770|ref|ZP_20112450.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE194]
gi|432910123|ref|ZP_20117250.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE190]
gi|432917569|ref|ZP_20122100.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE173]
gi|432924874|ref|ZP_20127013.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE175]
gi|432932774|ref|ZP_20132628.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE184]
gi|432942310|ref|ZP_20139652.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE183]
gi|432945103|ref|ZP_20141398.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE196]
gi|432953570|ref|ZP_20145869.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE197]
gi|432959821|ref|ZP_20150107.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE202]
gi|432966548|ref|ZP_20155468.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE203]
gi|432970614|ref|ZP_20159492.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE207]
gi|432977159|ref|ZP_20165984.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE209]
gi|432979941|ref|ZP_20168722.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE211]
gi|432984129|ref|ZP_20172868.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE215]
gi|432989542|ref|ZP_20178212.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE217]
gi|432994232|ref|ZP_20182849.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE218]
gi|432998651|ref|ZP_20187191.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE223]
gi|433003963|ref|ZP_20192401.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE227]
gi|433011171|ref|ZP_20199576.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE229]
gi|433012611|ref|ZP_20200994.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE104]
gi|433017393|ref|ZP_20205664.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE105]
gi|433022184|ref|ZP_20210210.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE106]
gi|433027479|ref|ZP_20215355.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE109]
gi|433031873|ref|ZP_20219688.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE112]
gi|433037373|ref|ZP_20224994.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE113]
gi|433041917|ref|ZP_20229452.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE117]
gi|433046508|ref|ZP_20233940.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE120]
gi|433051736|ref|ZP_20238974.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE122]
gi|433056775|ref|ZP_20243862.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE124]
gi|433061654|ref|ZP_20248620.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE125]
gi|433066645|ref|ZP_20253489.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE128]
gi|433071486|ref|ZP_20258188.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE129]
gi|433076635|ref|ZP_20263201.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE131]
gi|433081384|ref|ZP_20267859.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE133]
gi|433086041|ref|ZP_20272445.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE137]
gi|433090761|ref|ZP_20277069.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE138]
gi|433095304|ref|ZP_20281520.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE139]
gi|433099985|ref|ZP_20286097.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE145]
gi|433104572|ref|ZP_20290595.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE148]
gi|433109689|ref|ZP_20295569.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE150]
gi|433114388|ref|ZP_20300204.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE153]
gi|433118986|ref|ZP_20304700.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE157]
gi|433124005|ref|ZP_20309596.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE160]
gi|433128765|ref|ZP_20314245.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE163]
gi|433133585|ref|ZP_20318968.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE166]
gi|433138066|ref|ZP_20323353.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE167]
gi|433142999|ref|ZP_20328178.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE168]
gi|433147894|ref|ZP_20332960.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE174]
gi|433152581|ref|ZP_20337551.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE176]
gi|433157380|ref|ZP_20342256.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE177]
gi|433162251|ref|ZP_20347016.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE179]
gi|433167226|ref|ZP_20351902.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE180]
gi|433172307|ref|ZP_20356867.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE232]
gi|433176883|ref|ZP_20361350.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE82]
gi|433181970|ref|ZP_20366273.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE85]
gi|433187242|ref|ZP_20371371.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE88]
gi|433192367|ref|ZP_20376389.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE90]
gi|433197024|ref|ZP_20380953.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE94]
gi|433201858|ref|ZP_20385670.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE95]
gi|433206587|ref|ZP_20390288.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE97]
gi|433211367|ref|ZP_20394982.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE99]
gi|442590116|ref|ZP_21008900.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|442596446|ref|ZP_21014257.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|442606706|ref|ZP_21021501.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
Nissle 1917]
gi|443616464|ref|YP_007380320.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
APEC O78]
gi|444922755|ref|ZP_21242478.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 09BKT078844]
gi|444929077|ref|ZP_21248231.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0814]
gi|444934427|ref|ZP_21253371.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0815]
gi|444940006|ref|ZP_21258655.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0816]
gi|444945649|ref|ZP_21264071.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0839]
gi|444951153|ref|ZP_21269379.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0848]
gi|444956607|ref|ZP_21274609.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1753]
gi|444961951|ref|ZP_21279705.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1775]
gi|444967642|ref|ZP_21285119.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1793]
gi|444973144|ref|ZP_21290427.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1805]
gi|444983978|ref|ZP_21300848.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA11]
gi|444989221|ref|ZP_21305963.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA19]
gi|444994575|ref|ZP_21311172.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA13]
gi|445000071|ref|ZP_21316535.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA2]
gi|445005527|ref|ZP_21321868.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA47]
gi|445010700|ref|ZP_21326894.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA48]
gi|445016482|ref|ZP_21332533.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA8]
gi|445021929|ref|ZP_21337852.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 7.1982]
gi|445027171|ref|ZP_21342951.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1781]
gi|445032666|ref|ZP_21348292.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1762]
gi|445038359|ref|ZP_21353830.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA35]
gi|445043574|ref|ZP_21358914.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 3.4880]
gi|445049146|ref|ZP_21364317.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0083]
gi|445054796|ref|ZP_21369749.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0670]
gi|450185742|ref|ZP_21889212.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SEPT362]
gi|450211060|ref|ZP_21894199.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O08]
gi|450239654|ref|ZP_21899081.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
S17]
gi|452969098|ref|ZP_21967325.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. EC4009]
gi|62288033|sp|P0A6G7.1|CLPP_ECOLI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Caseinolytic protease; AltName:
Full=Endopeptidase Clp; AltName: Full=Heat shock protein
F21.5; AltName: Full=Protease Ti; Flags: Precursor
gi|62288034|sp|P0A6G8.1|CLPP_ECOL6 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|62288035|sp|P0A6G9.1|CLPP_ECO57 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|62288036|sp|P0A6H0.1|CLPP_SHIFL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90183183|sp|Q325G4.1|CLPP_SHIBS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90183184|sp|Q32JJ3.1|CLPP_SHIDS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|110816465|sp|Q3Z4W6.1|CLPP_SHISS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116243134|sp|Q0TKK4.1|CLPP_ECOL5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|116243136|sp|Q1RF98.1|CLPP_ECOUT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|122957620|sp|Q0T7E6.1|CLPP_SHIF8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201821|sp|A1A8A6.1|CLPP_ECOK1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167008648|sp|A7ZIJ5.1|CLPP_ECO24 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167008649|sp|A7ZX95.1|CLPP_ECOHS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082457|sp|B1J011.1|CLPP_ECOLC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|310942734|pdb|3MT6|R Chain R, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942735|pdb|3MT6|S Chain S, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942736|pdb|3MT6|T Chain T, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942737|pdb|3MT6|U Chain U, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942738|pdb|3MT6|O Chain O, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942739|pdb|3MT6|P Chain P, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942740|pdb|3MT6|Q Chain Q, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942741|pdb|3MT6|Y Chain Y, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942742|pdb|3MT6|Z Chain Z, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942743|pdb|3MT6|AA Chain a, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942744|pdb|3MT6|BB Chain b, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942745|pdb|3MT6|V Chain V, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942746|pdb|3MT6|W Chain W, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942747|pdb|3MT6|X Chain X, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942748|pdb|3MT6|M Chain M, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942749|pdb|3MT6|L Chain L, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942750|pdb|3MT6|K Chain K, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942751|pdb|3MT6|J Chain J, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942752|pdb|3MT6|I Chain I, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942753|pdb|3MT6|H Chain H, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942754|pdb|3MT6|N Chain N, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942755|pdb|3MT6|F Chain F, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942756|pdb|3MT6|E Chain E, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942757|pdb|3MT6|D Chain D, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942758|pdb|3MT6|C Chain C, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942759|pdb|3MT6|B Chain B, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942760|pdb|3MT6|A Chain A, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942761|pdb|3MT6|G Chain G, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|12513299|gb|AAG54787.1|AE005223_2 ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Escherichia coli O157:H7 str.
EDL933]
gi|26106846|gb|AAN79031.1|AE016756_214 ATP-dependent Clp protease proteolytic subunit [Escherichia coli
CFT073]
gi|145556|gb|AAA23588.1| ATP-dependent protease (clpP) [Escherichia coli]
gi|1773121|gb|AAB40193.1| ATP-dependent Clp proteinase [Escherichia coli]
gi|1786641|gb|AAC73540.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. MG1655]
gi|13359948|dbj|BAB33914.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli O157:H7 str. Sakai]
gi|30040183|gb|AAP15916.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Shigella flexneri 2a str.
2457T]
gi|56383209|gb|AAN42038.2| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Shigella flexneri 2a str. 301]
gi|73854489|gb|AAZ87196.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Shigella sonnei Ss046]
gi|81239804|gb|ABB60514.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Shigella dysenteriae Sd197]
gi|81244336|gb|ABB65044.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Shigella boydii Sb227]
gi|85674577|dbj|BAE76217.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K12 substr. W3110]
gi|91071085|gb|ABE05966.1| ATP-dependent proteolytic subunit of clpA-ClpP serine protease,
heat shock protein F21.5 [Escherichia coli UTI89]
gi|110342290|gb|ABG68527.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
536]
gi|110614013|gb|ABF02680.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Shigella flexneri 5 str. 8401]
gi|115511821|gb|ABI99895.1| ATP-dependent proteolytic subunit of ClpA-ClpP serine protease
[Escherichia coli APEC O1]
gi|157065644|gb|ABV04899.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli HS]
gi|157080329|gb|ABV20037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli E24377A]
gi|169756118|gb|ACA78817.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli ATCC 8739]
gi|169887858|gb|ACB01565.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. DH10B]
gi|170520994|gb|ACB19172.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli SMS-3-5]
gi|187428295|gb|ACD07569.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii CDC 3083-94]
gi|187766815|gb|EDU30659.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4196]
gi|188487796|gb|EDU62899.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 53638]
gi|189003087|gb|EDU72073.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4076]
gi|189358046|gb|EDU76465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4401]
gi|189362475|gb|EDU80894.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4486]
gi|189373600|gb|EDU92016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC869]
gi|190905047|gb|EDV64714.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli F11]
gi|192929158|gb|EDV82768.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli E22]
gi|208729341|gb|EDZ78942.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4206]
gi|208732507|gb|EDZ81195.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4045]
gi|208737157|gb|EDZ84841.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4042]
gi|209743854|gb|ACI70234.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209743856|gb|ACI70235.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209743858|gb|ACI70236.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209743860|gb|ACI70237.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209743862|gb|ACI70238.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209910913|dbj|BAG75987.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SE11]
gi|215263590|emb|CAS07920.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O127:H6 str. E2348/69]
gi|217322633|gb|EEC31057.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. TW14588]
gi|218350632|emb|CAU96324.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli 55989]
gi|218357436|emb|CAQ90075.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia fergusonii ATCC 35469]
gi|218359772|emb|CAQ97313.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli IAI1]
gi|218364116|emb|CAR01781.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli S88]
gi|218368637|emb|CAR16376.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli IAI39]
gi|218425865|emb|CAR06671.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli ED1a]
gi|218430818|emb|CAR11692.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli UMN026]
gi|222032232|emb|CAP74971.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
LF82]
gi|227838638|gb|EEJ49104.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
83972]
gi|238863325|gb|ACR65323.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli BW2952]
gi|242376218|emb|CAQ30909.1| clpP, subunit of ClpP serine protease, ClpAP, ClpXP and ClpAXP
[Escherichia coli BL21(DE3)]
gi|253325618|gb|ACT30220.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|253972407|gb|ACT38078.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli B
str. REL606]
gi|253976617|gb|ACT42287.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
BL21(DE3)]
gi|254591021|gb|ACT70382.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O157:H7 str. TW14359]
gi|257752309|dbj|BAI23811.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. 11368]
gi|257757785|dbj|BAI29282.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H2 str. 12009]
gi|257762954|dbj|BAI34449.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H- str. 11128]
gi|260450376|gb|ACX40798.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DH1]
gi|281177608|dbj|BAI53938.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SE15]
gi|281599777|gb|ADA72761.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
2002017]
gi|284920247|emb|CBG33306.1| ATP-dependent clp protease proteolytic subunit [Escherichia coli
042]
gi|290761217|gb|ADD55178.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. CB9615]
gi|291429411|gb|EFF02431.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
FVEC1412]
gi|291471765|gb|EFF14248.1| Clp protease [Escherichia coli B354]
gi|294492533|gb|ADE91289.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli IHE3034]
gi|298280283|gb|EFI21787.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
FVEC1302]
gi|299880021|gb|EFI88232.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 196-1]
gi|300404590|gb|EFJ88128.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 84-1]
gi|300414631|gb|EFJ97941.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 115-1]
gi|300452510|gb|EFK16130.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 116-1]
gi|300461832|gb|EFK25325.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 187-1]
gi|300527102|gb|EFK48171.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 119-7]
gi|300529122|gb|EFK50184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 107-1]
gi|300843357|gb|EFK71117.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 78-1]
gi|305853859|gb|EFM54298.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
NC101]
gi|306907687|gb|EFN38189.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli W]
gi|307552344|gb|ADN45119.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
ABU 83972]
gi|307628093|gb|ADN72397.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
UM146]
gi|308121483|gb|EFO58745.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 145-7]
gi|309700698|emb|CBI99994.1| ATP-dependent clp protease proteolytic subunit [Escherichia coli
ETEC H10407]
gi|312945015|gb|ADR25842.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O83:H1 str. NRG 857C]
gi|315059717|gb|ADT74044.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli W]
gi|315135119|dbj|BAJ42278.1| conserved hypothetical protein [Escherichia coli DH1]
gi|320173743|gb|EFW48926.1| ATP-dependent Clp protease proteolytic subunit [Shigella
dysenteriae CDC 74-1112]
gi|320178281|gb|EFW53255.1| ATP-dependent Clp protease proteolytic subunit [Shigella boydii
ATCC 9905]
gi|320186067|gb|EFW60812.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
CDC 796-83]
gi|320192853|gb|EFW67493.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. EC1212]
gi|320197089|gb|EFW71708.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
WV_060327]
gi|320201681|gb|EFW76257.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
EC4100B]
gi|320638432|gb|EFX08146.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. G5101]
gi|320643812|gb|EFX12935.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H- str. 493-89]
gi|320649163|gb|EFX17741.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H- str. H 2687]
gi|320656056|gb|EFX23972.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320661206|gb|EFX28637.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. USDA 5905]
gi|320665182|gb|EFX32275.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. LSU-61]
gi|323379718|gb|ADX51986.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli KO11FL]
gi|323938623|gb|EGB34872.1| Clp protease [Escherichia coli E1520]
gi|323943244|gb|EGB39400.1| Clp protease [Escherichia coli E482]
gi|323945342|gb|EGB41398.1| Clp protease [Escherichia coli H120]
gi|323952951|gb|EGB48819.1| Clp protease [Escherichia coli H252]
gi|323958630|gb|EGB54333.1| Clp protease [Escherichia coli H263]
gi|323963427|gb|EGB58989.1| Clp protease [Escherichia coli H489]
gi|323965124|gb|EGB60583.1| Clp protease [Escherichia coli M863]
gi|323972291|gb|EGB67501.1| Clp protease [Escherichia coli TA007]
gi|323976078|gb|EGB71171.1| Clp protease [Escherichia coli TW10509]
gi|324114664|gb|EGC08632.1| Clp protease [Escherichia fergusonii B253]
gi|324116925|gb|EGC10838.1| Clp protease [Escherichia coli E1167]
gi|326341201|gb|EGD64993.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. 1044]
gi|326346024|gb|EGD69763.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. 1125]
gi|330910231|gb|EGH38741.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
AA86]
gi|331037755|gb|EGI09975.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H736]
gi|331045775|gb|EGI17901.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli M605]
gi|331051116|gb|EGI23168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli M718]
gi|331054742|gb|EGI26751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA206]
gi|331060240|gb|EGI32204.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA143]
gi|331066016|gb|EGI37900.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA271]
gi|331070973|gb|EGI42332.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA280]
gi|331076167|gb|EGI47449.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H591]
gi|331081034|gb|EGI52199.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H299]
gi|335577004|gb|EGM63237.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri J1713]
gi|338771515|gb|EGP26255.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
PCN033]
gi|340735696|gb|EGR64752.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 01-09591]
gi|340741501|gb|EGR75647.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. LB226692]
gi|341921032|gb|EGT70636.1| hypothetical protein C22711_4669 [Escherichia coli O104:H4 str.
C227-11]
gi|342362476|gb|EGU26594.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
XH140A]
gi|344193757|gb|EGV47835.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
XH001]
gi|349736547|gb|AEQ11253.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O7:K1 str. CE10]
gi|354858263|gb|EHF18714.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 04-8351]
gi|354860139|gb|EHF20586.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. C227-11]
gi|354866835|gb|EHF27258.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. C236-11]
gi|354877171|gb|EHF37531.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 09-7901]
gi|354879478|gb|EHF39816.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4404]
gi|354884065|gb|EHF44379.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-3677]
gi|354885866|gb|EHF46158.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4522]
gi|354888933|gb|EHF49187.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4623]
gi|354901534|gb|EHF61661.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|354905765|gb|EHF65848.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|354908272|gb|EHF68328.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|354918744|gb|EHF78700.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|354922432|gb|EHF82347.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|355353088|gb|EHG02260.1| hypothetical protein i01_00596 [Escherichia coli cloneA_i1]
gi|355418925|gb|AER83122.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
str. 'clone D i2']
gi|355423845|gb|AER88041.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
str. 'clone D i14']
gi|359331197|dbj|BAL37644.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. MDS42]
gi|371594122|gb|EHN82994.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
H494]
gi|371595518|gb|EHN84367.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
TA124]
gi|371604298|gb|EHN92927.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
B093]
gi|371611430|gb|EHN99952.1| Clp protease [Escherichia coli H397]
gi|371612952|gb|EHO01455.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
E101]
gi|373248398|gb|EHP67828.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
4_1_47FAA]
gi|374357448|gb|AEZ39155.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. RM12579]
gi|375323616|gb|EHS69321.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H43 str. T22]
gi|377850929|gb|EHU15884.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1C]
gi|377854084|gb|EHU18974.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1B]
gi|377862760|gb|EHU27567.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1D]
gi|377866873|gb|EHU31637.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1E]
gi|377868228|gb|EHU32972.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2A]
gi|377879179|gb|EHU43752.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2B]
gi|377883602|gb|EHU48120.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2D]
gi|377885903|gb|EHU50394.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2C]
gi|377898425|gb|EHU62785.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2E]
gi|377900553|gb|EHU64885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3A]
gi|377914360|gb|EHU78483.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3C]
gi|377918753|gb|EHU82800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3D]
gi|377920840|gb|EHU84855.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3E]
gi|377932504|gb|EHU96358.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3F]
gi|377934476|gb|EHU98307.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4A]
gi|377940607|gb|EHV04356.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4B]
gi|377951398|gb|EHV15017.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4D]
gi|377955447|gb|EHV19003.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4E]
gi|377966083|gb|EHV29496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5A]
gi|377967396|gb|EHV30802.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4F]
gi|377973509|gb|EHV36849.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5B]
gi|377981472|gb|EHV44731.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5D]
gi|377981714|gb|EHV44972.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5C]
gi|377988579|gb|EHV51757.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5E]
gi|378000301|gb|EHV63375.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6A]
gi|378003854|gb|EHV66894.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6C]
gi|378014252|gb|EHV77158.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6D]
gi|378017176|gb|EHV80051.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6E]
gi|378018839|gb|EHV81685.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7A]
gi|378027887|gb|EHV90512.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7C]
gi|378032402|gb|EHV94983.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7D]
gi|378037735|gb|EHW00258.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7B]
gi|378042335|gb|EHW04784.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7E]
gi|378052755|gb|EHW15057.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8A]
gi|378057167|gb|EHW19402.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8B]
gi|378063094|gb|EHW25264.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8C]
gi|378069189|gb|EHW31284.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8D]
gi|378072756|gb|EHW34813.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8E]
gi|378081868|gb|EHW43816.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9A]
gi|378082738|gb|EHW44681.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9B]
gi|378090507|gb|EHW52344.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9C]
gi|378095202|gb|EHW56992.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9D]
gi|378102386|gb|EHW64063.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9E]
gi|378107900|gb|EHW69518.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10A]
gi|378116922|gb|EHW78440.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10B]
gi|378119411|gb|EHW80906.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10C]
gi|378121706|gb|EHW83157.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10D]
gi|378134748|gb|EHW96069.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10E]
gi|378136536|gb|EHW97830.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11A]
gi|378139984|gb|EHX01214.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10F]
gi|378147352|gb|EHX08500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11B]
gi|378153094|gb|EHX14180.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11D]
gi|378157257|gb|EHX18299.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11C]
gi|378161713|gb|EHX22689.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11E]
gi|378175102|gb|EHX35921.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12A]
gi|378175608|gb|EHX36424.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12B]
gi|378177102|gb|EHX37903.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12C]
gi|378190584|gb|EHX51168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13A]
gi|378191144|gb|EHX51720.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12E]
gi|378191957|gb|EHX52531.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12D]
gi|378208329|gb|EHX68713.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13D]
gi|378209338|gb|EHX69712.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13C]
gi|378219877|gb|EHX80144.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13E]
gi|378221927|gb|EHX82169.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14A]
gi|378226320|gb|EHX86507.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14B]
gi|378234469|gb|EHX94547.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14C]
gi|378237158|gb|EHX97185.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14D]
gi|380349368|gb|EIA37640.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SCI-07]
gi|383101824|gb|AFG39333.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
P12b]
gi|383394283|gb|AFH19241.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KO11FL]
gi|383403932|gb|AFH10175.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli W]
gi|383465981|gb|EID61002.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
5a str. M90T]
gi|385155302|gb|EIF17306.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O32:H37 str. P4]
gi|385539924|gb|EIF86751.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
M919]
gi|385704856|gb|EIG41928.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
B799]
gi|385712908|gb|EIG49847.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
H730]
gi|386141518|gb|EIG82668.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1.2741]
gi|386148905|gb|EIG95340.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 97.0246]
gi|386152506|gb|EIH03795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5.0588]
gi|386157483|gb|EIH13825.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 97.0259]
gi|386164349|gb|EIH26135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1.2264]
gi|386169627|gb|EIH36135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 96.0497]
gi|386170798|gb|EIH42851.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 99.0741]
gi|386177150|gb|EIH54629.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.2608]
gi|386186459|gb|EIH69175.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 93.0624]
gi|386191817|gb|EIH80558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 4.0522]
gi|386193173|gb|EIH87472.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli JB1-95]
gi|386200482|gb|EIH99473.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 96.154]
gi|386209764|gb|EII20251.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 9.0111]
gi|386217407|gb|EII33896.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 4.0967]
gi|386225831|gb|EII48156.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2.3916]
gi|386229558|gb|EII56913.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.3884]
gi|386236963|gb|EII68935.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2.4168]
gi|386242097|gb|EII79010.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.2303]
gi|386242421|gb|EII84156.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3003]
gi|386247039|gb|EII93212.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW07793]
gi|386252730|gb|EIJ02421.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli B41]
gi|386257287|gb|EIJ12778.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 900105 (10e)]
gi|386794491|gb|AFJ27525.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
Xuzhou21]
gi|388341952|gb|EIL08029.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9534]
gi|388345221|gb|EIL11007.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H25 str. CVM9340]
gi|388346439|gb|EIL12156.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H2 str. CVM9450]
gi|388360312|gb|EIL24533.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9570]
gi|388361234|gb|EIL25368.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9545]
gi|388368621|gb|EIL32246.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9574]
gi|388377634|gb|EIL40429.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM9942]
gi|388379316|gb|EIL41986.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O26:H11 str. CVM10026]
gi|388383822|gb|EIL45570.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KD1]
gi|388394242|gb|EIL55545.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
541-15]
gi|388395246|gb|EIL56470.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KD2]
gi|388398327|gb|EIL59247.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
576-1]
gi|388406306|gb|EIL66712.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
541-1]
gi|388415406|gb|EIL75336.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
HM605]
gi|388420456|gb|EIL80148.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
CUMT8]
gi|390650910|gb|EIN29283.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1996]
gi|390652871|gb|EIN31043.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA517]
gi|390653352|gb|EIN31499.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA505]
gi|390688660|gb|EIN63692.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA3]
gi|390708495|gb|EIN81715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA10]
gi|390710386|gb|EIN83408.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA15]
gi|390720217|gb|EIN92929.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA22]
gi|390733902|gb|EIO05463.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA25]
gi|390733923|gb|EIO05482.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA24]
gi|390737013|gb|EIO08328.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA28]
gi|390752231|gb|EIO22077.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA31]
gi|390752793|gb|EIO22599.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA32]
gi|390778620|gb|EIO46377.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA42]
gi|390784219|gb|EIO51792.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA39]
gi|390785934|gb|EIO53476.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW06591]
gi|390794961|gb|EIO62246.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW10246]
gi|390801804|gb|EIO68855.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW11039]
gi|390810296|gb|EIO77057.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW07945]
gi|390812006|gb|EIO78691.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09109]
gi|390819575|gb|EIO85908.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW10119]
gi|390823101|gb|EIO89173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09098]
gi|390837270|gb|EIP01701.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4203]
gi|390840057|gb|EIP04116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4196]
gi|390842294|gb|EIP06148.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09195]
gi|390855692|gb|EIP18374.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW14301]
gi|390860042|gb|EIP22369.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4421]
gi|390860502|gb|EIP22816.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW14313]
gi|390871773|gb|EIP33153.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4422]
gi|390876375|gb|EIP37361.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4013]
gi|390886159|gb|EIP46297.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4402]
gi|390888188|gb|EIP48084.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4439]
gi|390895026|gb|EIP54516.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4436]
gi|390904066|gb|EIP63082.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1738]
gi|390910613|gb|EIP69344.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4437]
gi|390911897|gb|EIP70578.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1734]
gi|390915105|gb|EIP73623.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4448]
gi|391254798|gb|EIQ13957.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2850-71]
gi|391256934|gb|EIQ16056.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri CCH060]
gi|391259221|gb|EIQ18296.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-1770]
gi|391268295|gb|EIQ27223.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-315]
gi|391273843|gb|EIQ32661.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-404]
gi|391288799|gb|EIQ47298.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 3226-85]
gi|391289061|gb|EIQ47557.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 4444-74]
gi|391296907|gb|EIQ54983.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 4822-66]
gi|391306878|gb|EIQ64626.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 225-75]
gi|391309584|gb|EIQ67252.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPECa12]
gi|391315322|gb|EIQ72855.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPEC C342-62]
gi|394390767|gb|EJE67727.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9602]
gi|394394615|gb|EJE71178.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10224]
gi|394399939|gb|EJE75900.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9634]
gi|394405883|gb|EJE80980.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9553]
gi|394409054|gb|EJE83641.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9455]
gi|394411993|gb|EJE86173.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10021]
gi|394431102|gb|EJF03345.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10030]
gi|394433365|gb|EJF05397.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM9952]
gi|397901491|gb|EJL17837.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 6603-63]
gi|397903014|gb|EJL19321.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei str. Moseley]
gi|404292798|gb|EJZ49589.1| ATP-dependent Clp protease proteolytic subunit [Escherichia sp.
1_1_43]
gi|404341888|gb|EJZ68290.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 1485-80]
gi|406779098|gb|AFS58522.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|407055680|gb|AFS75731.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2011C-3493]
gi|407063922|gb|AFS84969.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|408072549|gb|EKH06870.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA7]
gi|408076058|gb|EKH10287.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK920]
gi|408086071|gb|EKH19613.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA34]
gi|408090667|gb|EKH23938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA506]
gi|408095712|gb|EKH28677.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA507]
gi|408110228|gb|EKH42055.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1999]
gi|408130322|gb|EKH60470.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli NE037]
gi|408141708|gb|EKH71163.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA4]
gi|408150524|gb|EKH79106.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA23]
gi|408153279|gb|EKH81674.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA49]
gi|408158626|gb|EKH86743.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA45]
gi|408167182|gb|EKH94709.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TT12B]
gi|408172668|gb|EKH99731.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MA6]
gi|408174740|gb|EKI01704.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5905]
gi|408187056|gb|EKI13037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli CB7326]
gi|408192241|gb|EKI17818.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC96038]
gi|408192338|gb|EKI17914.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5412]
gi|408206225|gb|EKI31037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW00353]
gi|408232196|gb|EKI55447.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli N1]
gi|408233175|gb|EKI56310.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA38]
gi|408239305|gb|EKI62058.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1735]
gi|408249177|gb|EKI71129.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1736]
gi|408259573|gb|EKI80732.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1846]
gi|408268456|gb|EKI88812.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1847]
gi|408270231|gb|EKI90440.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1848]
gi|408285341|gb|EKJ04371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1850]
gi|408288146|gb|EKJ06984.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1856]
gi|408300617|gb|EKJ18302.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1862]
gi|408301169|gb|EKJ18823.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1864]
gi|408310092|gb|EKJ27176.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1865]
gi|408318281|gb|EKJ34496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1868]
gi|408318837|gb|EKJ35039.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1866]
gi|408331655|gb|EKJ46799.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1869]
gi|408337258|gb|EKJ51994.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli NE098]
gi|408338660|gb|EKJ53306.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1870]
gi|408347912|gb|EKJ62055.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 0.1288]
gi|408350623|gb|EKJ64471.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK523]
gi|408353294|gb|EKJ66816.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 0.1304]
gi|408457121|gb|EKJ80922.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
AD30]
gi|408559047|gb|EKK35390.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 5.2239]
gi|408559378|gb|EKK35701.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 3.4870]
gi|408585478|gb|EKK60345.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0586]
gi|408590504|gb|EKK64979.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.2524]
gi|408592319|gb|EKK66711.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0833]
gi|408604556|gb|EKK78130.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0869]
gi|408605962|gb|EKK79442.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0416]
gi|408617328|gb|EKK90450.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0821]
gi|412961686|emb|CCK45593.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Escherichia coli chi7122]
gi|412968301|emb|CCJ42918.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Escherichia coli]
gi|421934149|gb|EKT91926.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CFSAN001630]
gi|421945317|gb|EKU02534.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CFSAN001629]
gi|421946795|gb|EKU03909.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CFSAN001632]
gi|427214751|gb|EKV84023.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 88.1042]
gi|427217281|gb|EKV86350.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 89.0511]
gi|427234000|gb|EKW01709.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.2281]
gi|427234232|gb|EKW01931.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.0039]
gi|427236318|gb|EKW03899.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.0091]
gi|427251581|gb|EKW18144.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 93.0056]
gi|427253203|gb|EKW19646.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 93.0055]
gi|427254457|gb|EKW20818.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 94.0618]
gi|427270575|gb|EKW35453.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0943]
gi|427271063|gb|EKW35912.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0183]
gi|427276296|gb|EKW40870.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.1288]
gi|427286631|gb|EKW50469.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0428]
gi|427293895|gb|EKW57115.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0939]
gi|427304913|gb|EKW67533.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0003]
gi|427306553|gb|EKW69072.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0932]
gi|427310961|gb|EKW73181.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0107]
gi|427321629|gb|EKW83308.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.1742]
gi|427322536|gb|EKW84167.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0007]
gi|427334773|gb|EKW95841.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0678]
gi|427336797|gb|EKW97746.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0672]
gi|429260204|gb|EKY43797.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0109]
gi|429261864|gb|EKY45256.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0010]
gi|429351546|gb|EKY88266.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02030]
gi|429352249|gb|EKY88965.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429353007|gb|EKY89716.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02092]
gi|429366920|gb|EKZ03521.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02093]
gi|429367831|gb|EKZ04423.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02281]
gi|429370326|gb|EKZ06892.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02318]
gi|429382713|gb|EKZ19177.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02913]
gi|429384946|gb|EKZ21400.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-03943]
gi|429385469|gb|EKZ21922.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-03439]
gi|429397162|gb|EKZ33509.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-04080]
gi|429399390|gb|EKZ35711.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429399698|gb|EKZ36018.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429410452|gb|EKZ46674.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429412352|gb|EKZ48549.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429419337|gb|EKZ55475.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429427896|gb|EKZ63976.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429434740|gb|EKZ70764.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429435564|gb|EKZ71582.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429440105|gb|EKZ76084.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429444705|gb|EKZ80650.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429451010|gb|EKZ86902.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec12-0466]
gi|429456502|gb|EKZ92347.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9941]
gi|430879591|gb|ELC02922.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE4]
gi|430880733|gb|ELC04008.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE2]
gi|430888882|gb|ELC11553.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE10]
gi|430891423|gb|ELC13959.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE5]
gi|430900424|gb|ELC22443.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE11]
gi|430901424|gb|ELC23392.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE12]
gi|430909943|gb|ELC31301.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE16]
gi|430912044|gb|ELC33295.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE15]
gi|430918693|gb|ELC39694.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE25]
gi|430922722|gb|ELC43469.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE21]
gi|430929269|gb|ELC49780.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE26]
gi|430932803|gb|ELC53222.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE28]
gi|430938442|gb|ELC58683.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE39]
gi|430943765|gb|ELC63871.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE44]
gi|430947421|gb|ELC67119.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE181]
gi|430947712|gb|ELC67409.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE178]
gi|430956175|gb|ELC74851.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE187]
gi|430966661|gb|ELC84024.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE188]
gi|430969560|gb|ELC86664.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE189]
gi|430974577|gb|ELC91500.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE193]
gi|430976249|gb|ELC93124.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE191]
gi|430985237|gb|ELD01843.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE201]
gi|430992492|gb|ELD08863.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE204]
gi|430997200|gb|ELD13467.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE205]
gi|430999937|gb|ELD16011.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE206]
gi|431010397|gb|ELD24745.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE208]
gi|431010815|gb|ELD25159.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE210]
gi|431013139|gb|ELD26873.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE213]
gi|431018567|gb|ELD31998.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE212]
gi|431027822|gb|ELD40867.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE214]
gi|431032275|gb|ELD44986.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE216]
gi|431042147|gb|ELD52639.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE220]
gi|431044965|gb|ELD55220.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE224]
gi|431045628|gb|ELD55858.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE228]
gi|431054710|gb|ELD64279.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE230]
gi|431057196|gb|ELD66666.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE233]
gi|431064545|gb|ELD73412.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE235]
gi|431078330|gb|ELD85388.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE236]
gi|431085330|gb|ELD91443.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE237]
gi|431087077|gb|ELD93082.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE47]
gi|431094507|gb|ELE00139.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE49]
gi|431099580|gb|ELE04600.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE51]
gi|431103109|gb|ELE07779.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE53]
gi|431108816|gb|ELE12787.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE56]
gi|431110770|gb|ELE14687.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE55]
gi|431119564|gb|ELE22563.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE57]
gi|431124016|gb|ELE26670.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE58]
gi|431133000|gb|ELE34998.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE60]
gi|431133989|gb|ELE35955.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE62]
gi|431140544|gb|ELE42310.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE67]
gi|431144001|gb|ELE45709.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE66]
gi|431151484|gb|ELE52499.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE72]
gi|431158151|gb|ELE58772.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE75]
gi|431162899|gb|ELE63339.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE76]
gi|431165156|gb|ELE65514.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE77]
gi|431174033|gb|ELE74094.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE81]
gi|431174526|gb|ELE74571.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE80]
gi|431184353|gb|ELE84111.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE86]
gi|431185131|gb|ELE84861.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE83]
gi|431193336|gb|ELE92672.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE87]
gi|431195632|gb|ELE94601.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE93]
gi|431203796|gb|ELF02386.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE111]
gi|431204693|gb|ELF03251.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE116]
gi|431207361|gb|ELF05618.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE142]
gi|431213759|gb|ELF11615.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE119]
gi|431225052|gb|ELF22261.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE143]
gi|431225241|gb|ELF22446.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE156]
gi|431230815|gb|ELF26585.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE161]
gi|431237363|gb|ELF32363.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE162]
gi|431246948|gb|ELF41191.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE169]
gi|431247140|gb|ELF41382.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE171]
gi|431252989|gb|ELF46503.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE6]
gi|431259673|gb|ELF52036.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE8]
gi|431267053|gb|ELF58586.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE9]
gi|431268362|gb|ELF59836.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE17]
gi|431276654|gb|ELF67674.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE18]
gi|431278566|gb|ELF69556.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE45]
gi|431286362|gb|ELF77188.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE23]
gi|431286851|gb|ELF77671.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE42]
gi|431295828|gb|ELF85560.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE43]
gi|431300631|gb|ELF90182.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE29]
gi|431305615|gb|ELF93936.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE22]
gi|431312008|gb|ELG00156.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE46]
gi|431313380|gb|ELG01353.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE48]
gi|431319278|gb|ELG06962.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE50]
gi|431320738|gb|ELG08368.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE54]
gi|431330863|gb|ELG18127.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE59]
gi|431332057|gb|ELG19300.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE63]
gi|431342016|gb|ELG29012.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE65]
gi|431342482|gb|ELG29461.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE78]
gi|431345873|gb|ELG32787.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE79]
gi|431351309|gb|ELG38099.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE84]
gi|431357441|gb|ELG44108.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE101]
gi|431357851|gb|ELG44517.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE91]
gi|431368952|gb|ELG55183.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE115]
gi|431370758|gb|ELG56551.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE118]
gi|431375269|gb|ELG60613.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE123]
gi|431380187|gb|ELG65087.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE135]
gi|431388655|gb|ELG72378.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE136]
gi|431391889|gb|ELG75493.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE140]
gi|431397252|gb|ELG80708.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE141]
gi|431402564|gb|ELG85876.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE144]
gi|431405200|gb|ELG88443.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE147]
gi|431408148|gb|ELG91340.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE146]
gi|431413553|gb|ELG96318.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE154]
gi|431419991|gb|ELH02325.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE158]
gi|431425505|gb|ELH07575.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE165]
gi|431430034|gb|ELH11868.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE192]
gi|431437415|gb|ELH18925.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE194]
gi|431447198|gb|ELH27940.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE190]
gi|431447442|gb|ELH28174.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE173]
gi|431449533|gb|ELH30106.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE175]
gi|431454778|gb|ELH35136.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE183]
gi|431456807|gb|ELH37150.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE184]
gi|431463011|gb|ELH43205.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE196]
gi|431470700|gb|ELH50597.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE197]
gi|431475909|gb|ELH55713.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE203]
gi|431478716|gb|ELH58461.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE202]
gi|431482263|gb|ELH61966.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE209]
gi|431485751|gb|ELH65408.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE207]
gi|431496562|gb|ELH76145.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE211]
gi|431498787|gb|ELH77972.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE217]
gi|431506266|gb|ELH84864.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE215]
gi|431509566|gb|ELH87815.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE218]
gi|431514220|gb|ELH92062.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE223]
gi|431517284|gb|ELH94806.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE227]
gi|431519383|gb|ELH96835.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE229]
gi|431535946|gb|ELI12281.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE104]
gi|431537563|gb|ELI13680.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE105]
gi|431541069|gb|ELI16519.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE106]
gi|431545989|gb|ELI20632.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE109]
gi|431555549|gb|ELI29389.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE113]
gi|431560180|gb|ELI33701.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE112]
gi|431560390|gb|ELI33904.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE117]
gi|431572897|gb|ELI45721.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE120]
gi|431574218|gb|ELI47000.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE124]
gi|431575871|gb|ELI48594.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE122]
gi|431588358|gb|ELI59643.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE125]
gi|431591180|gb|ELI62180.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE128]
gi|431593673|gb|ELI63965.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE129]
gi|431601212|gb|ELI70729.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE131]
gi|431606029|gb|ELI75413.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE133]
gi|431610203|gb|ELI79504.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE137]
gi|431615213|gb|ELI84343.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE138]
gi|431619874|gb|ELI88771.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE139]
gi|431622851|gb|ELI91536.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE145]
gi|431631766|gb|ELJ00072.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE150]
gi|431634596|gb|ELJ02837.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE148]
gi|431636888|gb|ELJ05007.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE153]
gi|431649335|gb|ELJ16693.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE157]
gi|431650108|gb|ELJ17445.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE160]
gi|431651635|gb|ELJ18874.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE163]
gi|431663400|gb|ELJ30162.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE166]
gi|431665035|gb|ELJ31762.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE167]
gi|431666687|gb|ELJ33314.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE168]
gi|431676787|gb|ELJ42870.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE174]
gi|431678637|gb|ELJ44633.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE176]
gi|431682066|gb|ELJ47835.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE177]
gi|431692289|gb|ELJ57727.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE179]
gi|431694181|gb|ELJ59566.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE180]
gi|431696252|gb|ELJ61439.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE232]
gi|431709788|gb|ELJ74236.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE88]
gi|431710588|gb|ELJ74962.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE82]
gi|431711866|gb|ELJ76173.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE85]
gi|431721843|gb|ELJ85835.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE90]
gi|431725793|gb|ELJ89632.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE94]
gi|431726374|gb|ELJ90184.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE95]
gi|431733143|gb|ELJ96584.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE97]
gi|431736022|gb|ELJ99364.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE99]
gi|441609774|emb|CCP94813.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|441655107|emb|CCQ00170.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|441712013|emb|CCQ07478.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
Nissle 1917]
gi|443420972|gb|AGC85876.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
APEC O78]
gi|444542453|gb|ELV21811.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0814]
gi|444550931|gb|ELV28949.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 09BKT078844]
gi|444551798|gb|ELV29674.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0815]
gi|444565090|gb|ELV41991.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0839]
gi|444567160|gb|ELV43930.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0816]
gi|444571479|gb|ELV47961.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0848]
gi|444582364|gb|ELV58158.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1753]
gi|444585162|gb|ELV60742.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1775]
gi|444586123|gb|ELV61644.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1793]
gi|444600469|gb|ELV75305.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA11]
gi|444608386|gb|ELV82919.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1805]
gi|444614923|gb|ELV89148.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA13]
gi|444615589|gb|ELV89793.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA19]
gi|444623578|gb|ELV97498.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA2]
gi|444632670|gb|ELW06225.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA48]
gi|444632891|gb|ELW06440.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA47]
gi|444637804|gb|ELW11169.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA8]
gi|444647984|gb|ELW20940.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 7.1982]
gi|444650090|gb|ELW22942.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1781]
gi|444654180|gb|ELW26874.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1762]
gi|444663161|gb|ELW35406.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA35]
gi|444667434|gb|ELW39472.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 3.4880]
gi|444672857|gb|ELW44543.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0083]
gi|444674580|gb|ELW46110.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0670]
gi|449322675|gb|EMD12658.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O08]
gi|449324923|gb|EMD14843.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SEPT362]
gi|449324967|gb|EMD14886.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
S17]
Length = 207
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 138/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N ++ HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|410479152|ref|YP_006766789.1| peptidase S14, ClpP [Leptospirillum ferriphilum ML-04]
gi|424867689|ref|ZP_18291469.1| Peptidase S14, ClpP [Leptospirillum sp. Group II 'C75']
gi|124514481|gb|EAY55994.1| ATP-dependent Clp protease, proteolytic subunit [Leptospirillum
rubarum]
gi|387221743|gb|EIJ76256.1| Peptidase S14, ClpP [Leptospirillum sp. Group II 'C75']
gi|406774404|gb|AFS53829.1| peptidase S14, ClpP [Leptospirillum ferriphilum ML-04]
Length = 203
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 143/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D +AN+++AQLL+L+A D +KDI +Y+NSPGG VTAG+
Sbjct: 15 RSYDIYSRLLKDRIIFLGTAIDDMVANLVIAQLLFLEAEDASKDINLYINSPGGVVTAGL 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG AASMGA LL+AG GKR++LPN+RIMIHQPLGG QG ++
Sbjct: 75 AIYDTMQYIKPDVSTICVGQAASMGAVLLAAGADGKRFALPNARIMIHQPLGGVQGQATE 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L + +LNG L+ HT Q+L K+++DTDRD+F+SAE+AK YGL+D V+
Sbjct: 135 IEIHAREILKMREHLNGILAKHTKQSLAKVSQDTDRDYFLSAEDAKAYGLVDSVI 189
>gi|326795825|ref|YP_004313645.1| ATP-dependent Clp protease proteolytic subunit [Marinomonas
mediterranea MMB-1]
gi|326546589|gb|ADZ91809.1| ATP-dependent Clp protease proteolytic subunit [Marinomonas
mediterranea MMB-1]
Length = 210
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN++VAQLL+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 31 RSFDIYSRLLKERVIFLVGQVEDHMANLVVAQLLFLESENPDKDIHLYINSPGGSVTAGM 90
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G AASMGA LL+AG GKRY LPNSR+MIHQPLGG QG SD
Sbjct: 91 SIYDTMQFIKPDVSTMCIGQAASMGALLLTAGAAGKRYCLPNSRVMIHQPLGGYQGQASD 150
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ E+L K LN +++HTGQ +EK+ EDTDRD FM+ E AK+YGLID ++
Sbjct: 151 IEIHTREILSIKHRLNEIIAHHTGQPIEKVAEDTDRDNFMNPESAKEYGLIDDIL 205
>gi|261405359|ref|YP_003241600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Y412MC10]
gi|329923469|ref|ZP_08278950.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
gi|261281822|gb|ACX63793.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Y412MC10]
gi|328941269|gb|EGG37564.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
Length = 196
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 136/180 (75%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII ++DD+AN+++AQLL+L A DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKDRIIFLSSAIDDDVANLVIAQLLFLAAEDPEKDISLYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
I+DT++ I+PDVST+CVG+AASMG+ LL+AG GKRY+L NS +MIHQPLGG QG SD
Sbjct: 76 GIYDTMQLIKPDVSTICVGMAASMGSLLLTAGAPGKRYALENSEVMIHQPLGGIQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I + A+ ++ + LN TGQ LEKI DTDRDFFMSAEEAK YG+ID V+ +P K
Sbjct: 136 IQIHADWIIKTRQKLNQIYVERTGQPLEKIERDTDRDFFMSAEEAKAYGIIDDVLSSPTK 195
>gi|437999901|ref|YP_007183634.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|451812827|ref|YP_007449280.1| ATP-dependent Clp protease, protease subunit [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|429339135|gb|AFZ83557.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|451778796|gb|AGF49676.1| ATP-dependent Clp protease, protease subunit [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 210
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 112/204 (54%), Positives = 150/204 (73%), Gaps = 7/204 (3%)
Query: 84 LEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQL 143
L + + Y+PT E+ G R ++ S+L + RI+ GPV D AN+++AQL
Sbjct: 11 LGISNFNYVPTVI--EKSGRSE-----RAYDIYSRLLKERIVFLSGPVTDHSANLVIAQL 63
Query: 144 LYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGT 203
L+L++ DP+KDI +Y+NSPGGSV AGMAIFDT+ I+P VST+C+G+AASMGAFLL+AGT
Sbjct: 64 LFLESDDPSKDISLYINSPGGSVYAGMAIFDTMNFIKPHVSTMCIGIAASMGAFLLAAGT 123
Query: 204 KGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINED 263
KGKR+SLPN+ +MIHQP GGAQG SDI + A E+L + LN L+ +TGQT+EKI+ D
Sbjct: 124 KGKRFSLPNACMMIHQPSGGAQGQASDIQIHAEEILRLRNRLNKILADNTGQTMEKISSD 183
Query: 264 TDRDFFMSAEEAKDYGLIDGVVMN 287
TDRD FMSA +A +YGLID ++ N
Sbjct: 184 TDRDNFMSANDALNYGLIDKILAN 207
>gi|300869048|ref|ZP_07113650.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria sp.
PCC 6506]
gi|300332959|emb|CBN58844.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria sp.
PCC 6506]
Length = 197
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 114/200 (57%), Positives = 144/200 (72%), Gaps = 11/200 (5%)
Query: 86 VPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLY 145
VPS PY P R+ ++ ++L Q RII G V D +AN IVA LLY
Sbjct: 5 VPSVPY-----------RLPGSTYERWIDIYTRLSQERIIFLGQEVTDGLANRIVAYLLY 53
Query: 146 LDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKG 205
LD+ D K I +Y+NSPGGSVTAGMAIFDT+++I+ +V T+CVG AASMGAFLL+AGTKG
Sbjct: 54 LDSDDSTKPIFIYINSPGGSVTAGMAIFDTMQYIKSEVVTMCVGQAASMGAFLLAAGTKG 113
Query: 206 KRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTD 265
KR +LP++RIMIHQPLGG +G +DI ++A E+L + LN L+ TGQTLEKI +DTD
Sbjct: 114 KRLALPHARIMIHQPLGGTRGQATDIQIEAKEILRVRQQLNEMLAKRTGQTLEKIQKDTD 173
Query: 266 RDFFMSAEEAKDYGLIDGVV 285
RD+FMSA EAK+YGLID V+
Sbjct: 174 RDYFMSAAEAKEYGLIDQVI 193
>gi|119503321|ref|ZP_01625405.1| ATP-dependent Clp protease proteolytic subunit [marine gamma
proteobacterium HTCC2080]
gi|119460967|gb|EAW42058.1| ATP-dependent Clp protease proteolytic subunit [marine gamma
proteobacterium HTCC2080]
Length = 212
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 139/174 (79%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I GPVED+MAN+IVAQLL+L++ +P+KDI +Y+NSPGGSVTAG++I+
Sbjct: 31 DIYSRLLKERVIFAVGPVEDNMANLIVAQLLFLESENPDKDIHLYINSPGGSVTAGLSIY 90
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ ++PDVST+C+G AASMGAFLLS G GKRY LPN+R MIHQP GGAQG +DID+
Sbjct: 91 DTMQFVKPDVSTMCLGQAASMGAFLLSGGASGKRYILPNARTMIHQPSGGAQGQATDIDI 150
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
QA E+L + LN ++ HTGQ LE I DT+RD FM AE+++ YGL+D VV N
Sbjct: 151 QAKEILIIRERLNRLMAEHTGQPLEVIERDTERDRFMDAEQSQSYGLVDHVVNN 204
>gi|417230125|ref|ZP_12031711.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5.0959]
gi|386206615|gb|EII11121.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5.0959]
Length = 207
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 138/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N ++ HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 152 HAREILKVKGRMNELMAIHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|227486247|ref|ZP_03916563.1| endopeptidase Clp [Anaerococcus lactolyticus ATCC 51172]
gi|227235658|gb|EEI85673.1| endopeptidase Clp [Anaerococcus lactolyticus ATCC 51172]
Length = 205
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D++++II+AQLL+L++ DPNKDI Y+NSPGG VT+G+
Sbjct: 27 RAYDIYSRLLKDRIIFLSGEVRDEVSDIIIAQLLFLESEDPNKDIHFYINSPGGVVTSGL 86
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ +I+PDVST+C+G AASMGA LLS+G KGKR+SLPNS IMIHQP GGAQG SD
Sbjct: 87 AIYDTMNYIKPDVSTICIGQAASMGAVLLSSGAKGKRFSLPNSNIMIHQPSGGAQGQASD 146
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I +QA ++L KANLN LS +TG+ L I +DTDRDF M+AEEA YGLID V+
Sbjct: 147 IVIQAEQILKIKANLNRILSENTGKDLATIEKDTDRDFAMTAEEALKYGLIDKVI 201
>gi|123443342|ref|YP_001007316.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|420257505|ref|ZP_14760262.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. enterocolitica WA-314]
gi|2493738|sp|Q60107.1|CLPP_YEREN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214722|sp|A1JNN2.1|CLPP_YERE8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|1377852|gb|AAC45782.1| ClpP [Yersinia enterocolitica]
gi|122090303|emb|CAL13169.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|404515019|gb|EKA28797.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. enterocolitica WA-314]
Length = 207
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 138/174 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+I AQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++ A E+L K+ +N ++ HTG++LE+I DT+RD F+SA+EA +YGL+D V
Sbjct: 149 IEIHAKEILKVKSRMNELMAKHTGKSLEEIERDTERDRFLSADEAVEYGLVDSV 202
>gi|186681465|ref|YP_001864661.1| ATP-dependent Clp protease proteolytic subunit [Nostoc punctiforme
PCC 73102]
gi|186463917|gb|ACC79718.1| peptidase S14, ClpP [Nostoc punctiforme PCC 73102]
Length = 203
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 104/172 (60%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ +L++ RII G ++D++AN I+A +LYLD+ DP KDI +Y+NSPGG VT+GMAIF
Sbjct: 22 SIYDRLYRERIIFLGRDIDDEIANQIIAVMLYLDSDDPGKDIYLYINSPGGMVTSGMAIF 81
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HI+ DV T+CVGLAASMG+FLL+AGTKGKR +LP+SRIMIHQP GG +G +DI++
Sbjct: 82 DTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRGQATDIEI 141
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
+A E+L + LNG + TGQT+ KI +D DRDFFMSAEEAK+YGLID V+
Sbjct: 142 EAREILRIRHQLNGIYADKTGQTIAKIEKDMDRDFFMSAEEAKEYGLIDRVI 193
>gi|28897691|ref|NP_797296.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
parahaemolyticus RIMD 2210633]
gi|260898290|ref|ZP_05906786.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus Peru-466]
gi|308094762|ref|ZP_05891792.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AN-5034]
gi|31340006|sp|Q87R80.1|CLPP_VIBPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|28805904|dbj|BAC59180.1| ATP-dependent Clp protease, proteolytic subunit [Vibrio
parahaemolyticus RIMD 2210633]
gi|308088425|gb|EFO38120.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus Peru-466]
gi|308093191|gb|EFO42886.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AN-5034]
Length = 200
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 136/175 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN++VAQLL+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 21 RSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGM 80
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+P+VSTVC+G A SMGAFLL+ G GKRY LPNSR+MIHQPLGG QG SD
Sbjct: 81 SIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAAGKRYVLPNSRVMIHQPLGGFQGQASD 140
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ HTGQ LE I DTDRD FMSAE+A +YG++D V+
Sbjct: 141 IQIHAQEILTIKQKLNNLLAEHTGQPLEVIERDTDRDNFMSAEQAVEYGIVDAVL 195
>gi|67921362|ref|ZP_00514880.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|416383634|ref|ZP_11684482.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
gi|67856474|gb|EAM51715.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|357265220|gb|EHJ14013.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
Length = 200
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 116/202 (57%), Positives = 151/202 (74%), Gaps = 13/202 (6%)
Query: 86 VPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLY 145
VPS PY +Q E R+ ++ ++L Q RII G V D +AN IVA LLY
Sbjct: 5 VPSVPYRLPGSQYE-----------RWIDIYTRLGQERIIFLGQEVSDGIANRIVALLLY 53
Query: 146 LDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKG 205
LD+ DPNK I +Y+NSPGGSVTAGMAI+DT+++I+ +V T+CVGLAASMG+FLL+AGT G
Sbjct: 54 LDSDDPNKPIYLYINSPGGSVTAGMAIYDTMQYIKSEVITICVGLAASMGSFLLAAGTPG 113
Query: 206 KRYSLPNSRIMIHQPLGGAQGGQ--SDIDLQANEMLHHKANLNGYLSYHTGQTLEKINED 263
KR +LP++RIMIHQPLGG G + +DI+++ANE+L +A LN L+ GQ+LEKI +D
Sbjct: 114 KRLALPHARIMIHQPLGGTGGRRQATDIEIEANEILRIRAQLNQLLADQCGQSLEKIEKD 173
Query: 264 TDRDFFMSAEEAKDYGLIDGVV 285
TDRD+FMSAEEAK+YGLID V+
Sbjct: 174 TDRDYFMSAEEAKEYGLIDKVI 195
>gi|238759262|ref|ZP_04620429.1| ATP-dependent Clp protease proteolytic subunit [Yersinia aldovae
ATCC 35236]
gi|238702549|gb|EEP95099.1| ATP-dependent Clp protease proteolytic subunit [Yersinia aldovae
ATCC 35236]
Length = 194
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 99/174 (56%), Positives = 139/174 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+I AQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 16 RSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 76 SIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++ A E+L K+ +N +++HTG++LE+I DT+RD F+SA++A +YGL+D V
Sbjct: 136 IEIHAKEILKVKSRMNELMAHHTGKSLEEIERDTERDRFLSAQQAVEYGLVDSV 189
>gi|154148860|ref|YP_001405639.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
hominis ATCC BAA-381]
gi|166201810|sp|A7HZE8.1|CLPP_CAMHC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|153804869|gb|ABS51876.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
hominis ATCC BAA-381]
Length = 195
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G + D++A+ +VAQLL+L+A DP+KDI +Y+NSPGG VT+G
Sbjct: 15 RSYDIYSRLLKDRIVMLSGEINDEVASSVVAQLLFLEAEDPDKDIYLYINSPGGVVTSGF 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ +I+P VST+C+G AASMGAFLLS G KGKRY+LPN+RIMIHQPLGGAQG +D
Sbjct: 75 SIYDTMNYIKPAVSTICIGQAASMGAFLLSCGEKGKRYALPNARIMIHQPLGGAQGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ E+L KA LN L+ ++GQ L KI +DTDRDF+MSA+EA YGLID V+
Sbjct: 135 IEITTKEILRIKATLNKILAENSGQKLSKIEKDTDRDFYMSAQEAVKYGLIDKVL 189
>gi|262037349|ref|ZP_06010814.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
goodfellowii F0264]
gi|261748606|gb|EEY35980.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
goodfellowii F0264]
Length = 189
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GG VED++AN I+AQLL+LDA D KDI+MY+NSPGG VTAG+
Sbjct: 15 RSYDIYSRLLKDRIIFLGGEVEDNIANSIIAQLLFLDAQDKEKDIVMYINSPGGVVTAGL 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+RHI+ DVSTVC+G AASMGA LL++G KGKRYSLPNSR+MIHQP GGA+G +D
Sbjct: 75 AIYDTMRHIKADVSTVCIGQAASMGAVLLASGAKGKRYSLPNSRVMIHQPSGGARGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I +QA E+ K LN LS TG+ +E+I DT+RD FMS+EEA YG+ID ++
Sbjct: 135 IQIQAKEIEKIKKTLNEILSEATGKPVEEIYRDTERDNFMSSEEALAYGIIDKIL 189
>gi|114048055|ref|YP_738605.1| ATP-dependent Clp protease proteolytic subunit [Shewanella sp.
MR-7]
gi|123326387|sp|Q0HTK7.1|CLPP_SHESR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|113889497|gb|ABI43548.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella sp.
MR-7]
Length = 202
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 108/172 (62%), Positives = 135/172 (78%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G VE+ MAN+IVAQLL+L++ P+KDI +Y+NSPGGSVTAGMAI+
Sbjct: 27 DIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLESESPDKDIFLYINSPGGSVTAGMAIY 86
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+P+VSTVC+G AASMGAFLL+ G KGKR+ LPNSR+MIHQPLGG QG SDI +
Sbjct: 87 DTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRVMIHQPLGGFQGQASDIAI 146
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K LN L+ HTGQ LE I DTDRD FMSA +A DYGL+D V+
Sbjct: 147 HAQEILGIKHKLNLMLAEHTGQPLEVIERDTDRDNFMSATQAVDYGLVDAVM 198
>gi|392395333|ref|YP_006431935.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dehalogenans ATCC 51507]
gi|390526411|gb|AFM02142.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 202
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 106/183 (57%), Positives = 141/183 (77%), Gaps = 3/183 (1%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GGPV DD+AN+IVAQ+L+L+A DP KDI +Y+NSPGGS++AGM
Sbjct: 17 RSYDIYSRLLKDRIIFLGGPVTDDVANLIVAQMLFLEAEDPEKDIFLYINSPGGSISAGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPL---GGAQGG 227
AI+DT+++IR DV T+CVGLAASMGAFLL+AG KGKR +LPN+ I+IHQPL GG G
Sbjct: 77 AIYDTMQYIRSDVHTICVGLAASMGAFLLTAGAKGKRSALPNAEILIHQPLIGGGGISGQ 136
Query: 228 QSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
++I++ A +L K +N L+ TGQT+E+I DTDRD +M+AEEAK+YGLID V
Sbjct: 137 ATEIEIHAKHLLRVKERMNRILAERTGQTIERIEADTDRDRYMTAEEAKEYGLIDEVFEK 196
Query: 288 PHK 290
+K
Sbjct: 197 ANK 199
>gi|187776850|ref|ZP_02993323.1| hypothetical protein CLOSPO_00389 [Clostridium sporogenes ATCC
15579]
gi|424826849|ref|ZP_18251700.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
sporogenes PA 3679]
gi|187775509|gb|EDU39311.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium sporogenes ATCC 15579]
gi|365980550|gb|EHN16576.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
sporogenes PA 3679]
Length = 194
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII V D A++IVAQLL+L+A DP+KDI +Y+NSPGGS+T+GM
Sbjct: 16 RSYDIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIYLYINSPGGSITSGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG+AASMGAFLL+AG KGKRY+LPNS +MIHQPLGG +G +D
Sbjct: 76 AIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A +L K LN LS TG+ LE++ DT+RD F+SAEEAK+YGLID V+
Sbjct: 136 IGIHAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEAKEYGLIDEVI 190
>gi|421745790|ref|ZP_16183628.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus necator
HPC(L)]
gi|409775704|gb|EKN57162.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus necator
HPC(L)]
Length = 216
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R++ G V D AN+++AQLL+L++ +P+KD+ +Y+NSPGGSV+AG+
Sbjct: 38 RAYDIYSRLLKERLVFMVGEVNDQTANLVIAQLLFLESENPDKDVFLYINSPGGSVSAGL 97
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
A++DT++ I+PDVST+C+G+AASMGAFLL+AG KGKR +LPNSRIMIHQPLGGA+G SD
Sbjct: 98 AVYDTMQFIKPDVSTLCMGMAASMGAFLLAAGAKGKRLALPNSRIMIHQPLGGARGQASD 157
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ + LN L+ TGQ +EKI DTDRD FMS ++A DYGLID V+
Sbjct: 158 IEIQAREILYLRERLNSILAEVTGQPVEKIARDTDRDNFMSGDQAVDYGLIDKVI 212
>gi|87301613|ref|ZP_01084453.1| Clp protease proteolytic subunit [Synechococcus sp. WH 5701]
gi|87283830|gb|EAQ75784.1| Clp protease proteolytic subunit [Synechococcus sp. WH 5701]
Length = 213
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D +A+ +VAQLL+L+A DP KDI +Y+NSPGGSVTAG+
Sbjct: 33 RAFDIYSRLLRERIIFLGTGIDDQVADSLVAQLLFLEAEDPEKDIQIYVNSPGGSVTAGL 92
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ + PDV T+C GLAASMGAFLLS GTKGKR +LP++RIMIHQPLGGAQG D
Sbjct: 93 AIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRMALPSARIMIHQPLGGAQGQAVD 152
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L K LNG ++ HTGQ L KI EDTDRD+F+S EA YGLID VV
Sbjct: 153 IEIQAKEILFLKDTLNGLMAEHTGQPLAKIAEDTDRDYFLSPPEAVSYGLIDRVV 207
>gi|374295111|ref|YP_005045302.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
clariflavum DSM 19732]
gi|359824605|gb|AEV67378.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
clariflavum DSM 19732]
Length = 194
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII + D A+++VAQ+L+L+A DP+KDI +Y+NSPGGSV+AG
Sbjct: 16 RSYDIFSRLLKDRIIVLSDEINDATASLVVAQMLFLEAEDPDKDIQLYINSPGGSVSAGF 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++++PDVST+C+G+AASMGAFLL+AG KGKR++LPNS IMIHQPLGGA+G +D
Sbjct: 76 AIYDTMQYVKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGARGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A+ ++ + LN LS TGQ LE+I DT+RDFFMSAEEAK YGL+D V+
Sbjct: 136 IKIHADHIIKTRERLNRILSERTGQPLERIQADTERDFFMSAEEAKAYGLVDEVM 190
>gi|257093849|ref|YP_003167490.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046373|gb|ACV35561.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 209
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 106/198 (53%), Positives = 148/198 (74%), Gaps = 6/198 (3%)
Query: 100 QGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
Q G PM++ R ++ S+L + R++ GPV D AN++VAQLL+L+A +P+K
Sbjct: 12 QALGLVPMVIEQSGRGERAYDIYSRLLKERVVFLVGPVNDVTANLVVAQLLFLEAENPDK 71
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI Y+NSPGGSV+AG++++DT++ I+PDVST+C+G A SMGAFLL+AGT+GKR++LPNS
Sbjct: 72 DIHFYINSPGGSVSAGLSVYDTMQFIKPDVSTLCMGQACSMGAFLLAAGTRGKRFALPNS 131
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
R+MIHQP+GG QG SDI + A E+L +A LN ++ HTGQ +E+I DTDRD F+SA+
Sbjct: 132 RVMIHQPMGGFQGQASDIAIHAKEILSLRAKLNELMALHTGQEIERIERDTDRDNFLSAQ 191
Query: 274 EAKDYGLIDGVVMNPHKI 291
EA +YGLID V+ N I
Sbjct: 192 EAAEYGLIDKVLANREAI 209
>gi|167624686|ref|YP_001674980.1| ATP-dependent Clp protease proteolytic subunit [Shewanella
halifaxensis HAW-EB4]
gi|189082465|sp|B0TLU9.1|CLPP_SHEHH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167354708|gb|ABZ77321.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
halifaxensis HAW-EB4]
Length = 203
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 136/175 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VE+ MAN+IVAQLL+L++ P+KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESESPDKDIYLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+P+VSTVC+G AASMGAFLL+ G +GKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 85 AIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAEGKRHCLPNSRVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ HTGQ LE I DTDRD FMSA EA +YGL+D V+
Sbjct: 145 IAIHAQEILGIKNKLNTMLAEHTGQPLEVIERDTDRDNFMSATEAAEYGLVDSVI 199
>gi|424795846|ref|ZP_18221654.1| ATP-dependent Clp protease [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|433679138|ref|ZP_20510914.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
translucens pv. translucens DSM 18974]
gi|440731335|ref|ZP_20911360.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
translucens DAR61454]
gi|422795260|gb|EKU23983.1| ATP-dependent Clp protease [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|430815742|emb|CCP41464.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
translucens pv. translucens DSM 18974]
gi|440373297|gb|ELQ10056.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
translucens DAR61454]
Length = 208
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 105/185 (56%), Positives = 144/185 (77%), Gaps = 1/185 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GP++D MAN+IVAQ+L+L+A +P KDI +Y+NSPGG VTAGM
Sbjct: 23 RAYDIYSRLLKERLIFLVGPIDDHMANVIVAQMLFLEADNPEKDINIYINSPGGVVTAGM 82
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G AASMGA LL++G GKRY+LPNSR+MIHQPLGG QG +D
Sbjct: 83 AIYDTMQYIKPDVSTICIGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATD 142
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV-MNPH 289
ID+ A E+L ++ LN L+ HTGQ+LE I DT+RD F SA +A+ YGL+D V+ P
Sbjct: 143 IDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFKSAVDAQAYGLVDQVLERRPE 202
Query: 290 KILQP 294
+ +QP
Sbjct: 203 ESIQP 207
>gi|416052901|ref|ZP_11578536.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
gi|347991693|gb|EGY33156.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
Length = 188
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 139/174 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED+MAN+IVAQLL+L++ DP+KDI +Y+NSPGGSVTAGM
Sbjct: 11 RAYDIYSRLLKDRVIFLSGEVEDNMANLIVAQLLFLESEDPDKDINLYINSPGGSVTAGM 70
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDV T+C+G A SMGAFLL+ G GKR +LP++R+MIHQPLGG +G SD
Sbjct: 71 AIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGATGKRGALPHARVMIHQPLGGFRGQASD 130
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I + A E+L K+ LN L++HTGQ +E I +DTDRD FMSA+EAK+YGLID V
Sbjct: 131 IQIHAQEILKIKSTLNERLAFHTGQPIETIEKDTDRDNFMSAQEAKNYGLIDKV 184
>gi|404493314|ref|YP_006717420.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
carbinolicus DSM 2380]
gi|90183182|sp|Q3A3X5.1|CLPP_PELCD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77545370|gb|ABA88932.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
carbinolicus DSM 2380]
Length = 194
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GG V+D +AN+I+AQ+L+L++ DP K+I +Y+NSPGG VTAGM
Sbjct: 16 RAYDIFSRLLKDRIIFLGGAVDDQVANLIIAQMLFLESEDPEKEIFLYINSPGGVVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++++R VST+CVG AASMGA LL+AG +GKR++LP++RIMIHQP GG QG +D
Sbjct: 76 AIYDTMQYVRCPVSTLCVGQAASMGAVLLAAGGEGKRFALPHARIMIHQPWGGFQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L + LNG L+ HTGQTLEKI DT+RDFFM +EEAK YG++D +V
Sbjct: 136 INIHAQEILRLRETLNGVLASHTGQTLEKIATDTERDFFMGSEEAKKYGIVDDIV 190
>gi|403380350|ref|ZP_10922407.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. JC66]
Length = 193
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P+ D +AN ++AQLL+LDA D KDI +Y+NSPGGS++AGM
Sbjct: 16 RAYDIYSRLLKDRIIFLGTPINDQVANAVIAQLLFLDAQDQEKDIHLYINSPGGSISAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT++ I+ DVST+CVGLAASMGAFLL+AG GKRY+LPNS IMIHQPLGGA+G SD
Sbjct: 76 AIFDTMQFIKSDVSTICVGLAASMGAFLLAAGEIGKRYALPNSEIMIHQPLGGAEGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I+++A +L + LN L+ T Q LE+I +DTDRD+FM A++AK+YG+ID V+
Sbjct: 136 IEIRAKRILRMREKLNHILAERTKQPLERIEKDTDRDYFMWADQAKEYGIIDKVI 190
>gi|357009615|ref|ZP_09074614.1| ClpP [Paenibacillus elgii B69]
Length = 196
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 135/175 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++DD+AN+++AQLL+L AVDP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKDRIIFLGSAIDDDVANLVIAQLLFLSAVDPEKDIHLYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
I+DT++ I+PDVST+CVG+AASMG+ LL+AG KGKRY+LPNS +MIHQPLGG +G SD
Sbjct: 76 GIYDTMQFIKPDVSTICVGMAASMGSLLLTAGAKGKRYALPNSEVMIHQPLGGVRGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A+ ++ K LN TGQ E+I DTDRD FMSAE+AK YGLID V+
Sbjct: 136 IKIHADWIIKTKQKLNQIYVERTGQPYERIERDTDRDNFMSAEDAKAYGLIDAVI 190
>gi|377820658|ref|YP_004977029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. YI23]
gi|357935493|gb|AET89052.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. YI23]
Length = 217
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 143/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R++ G V D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AGM
Sbjct: 39 RAYDIYSRLLKERVVFLVGEVNDQSANLVVAQLLFLESENPDKDISLYINSPGGSVSAGM 98
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ ++PDVST+C+GLAASMGAFLL++G KGKR +LPN+R+MIHQPLGGA+G SD
Sbjct: 99 AIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRVALPNARVMIHQPLGGARGQASD 158
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ K LN LS+HTGQ +E+I DTDRD FMS ++A+ YG++D V+
Sbjct: 159 IEIQAREILYLKERLNQLLSHHTGQPVERIARDTDRDNFMSGDDAQAYGIVDQVL 213
>gi|330503117|ref|YP_004379986.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
mendocina NK-01]
gi|328917403|gb|AEB58234.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
mendocina NK-01]
Length = 213
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 109/202 (53%), Positives = 146/202 (72%), Gaps = 6/202 (2%)
Query: 89 SPYIPTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQ 142
+P++ + + GG PM++ R ++ S+L + R+I G VED MAN+I AQ
Sbjct: 4 NPFMQNMPEIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFMVGQVEDYMANLICAQ 63
Query: 143 LLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAG 202
LL+L+A +P+KDI +Y+NSPGGSVTAGMAI+DT++ I+ DVST C+G A SMGAFLL+ G
Sbjct: 64 LLFLEAENPDKDIHLYINSPGGSVTAGMAIYDTMQFIKADVSTTCIGQACSMGAFLLAGG 123
Query: 203 TKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINE 262
KGKR+ LPNSR+MIHQPLGG QG SDI++ A E+L + LN L++HTGQ+LE I
Sbjct: 124 AKGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNELLAHHTGQSLETIER 183
Query: 263 DTDRDFFMSAEEAKDYGLIDGV 284
DT+RD FMSA A +YGL+D V
Sbjct: 184 DTNRDNFMSASRAVEYGLVDAV 205
>gi|428207691|ref|YP_007092044.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chroococcidiopsis thermalis PCC 7203]
gi|428009612|gb|AFY88175.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chroococcidiopsis thermalis PCC 7203]
Length = 197
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 111/196 (56%), Positives = 147/196 (75%), Gaps = 8/196 (4%)
Query: 90 PYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAV 149
P +P GEQ ++ ++ ++L++ RII G V+D++AN I+A +LYLD+
Sbjct: 6 PKVPYRMPGEQ--------YTQWIDIYNRLYRERIIFLGRDVDDEIANQIIAVMLYLDSE 57
Query: 150 DPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS 209
DP KDI +Y+NSPGG VT+GMAI+DT++HI+ DV T+CVGLAASMG+FLL+AGTKGKR +
Sbjct: 58 DPGKDISLYINSPGGMVTSGMAIYDTMQHIKSDVITICVGLAASMGSFLLAAGTKGKRLA 117
Query: 210 LPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFF 269
LP+SRIMIHQP GG +G SDI+++A E+L + LN + +TGQ LEKI +D DRDFF
Sbjct: 118 LPHSRIMIHQPSGGTRGQASDIEIEAREILRIRGQLNQIYANNTGQPLEKIEKDMDRDFF 177
Query: 270 MSAEEAKDYGLIDGVV 285
MSAEEAK YGLID VV
Sbjct: 178 MSAEEAKAYGLIDHVV 193
>gi|372270957|ref|ZP_09507005.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Marinobacterium stanieri S30]
Length = 211
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 108/192 (56%), Positives = 142/192 (73%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
Q G PM++ R ++ S+L + R+I GPVED MAN+IVAQLL+L+A +P+K
Sbjct: 13 QNSGLVPMVVEQSSRGERAYDIYSRLLKERVIFLVGPVEDHMANLIVAQLLFLEAENPDK 72
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI +Y+NSPGGSVTAGMAI+DT++ I+PDVST+C+G AASMGAFLL+ G KGKR++LPN+
Sbjct: 73 DIHLYINSPGGSVTAGMAIYDTMQFIKPDVSTMCIGQAASMGAFLLAGGAKGKRFALPNA 132
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
R+MIHQPLGG QG +DI++ E+L + LN L+ HTGQ E + DTDRD FM +
Sbjct: 133 RVMIHQPLGGYQGQATDIEIHTKEILSIREKLNRLLAEHTGQDFETVARDTDRDNFMDPQ 192
Query: 274 EAKDYGLIDGVV 285
A DYGLID V+
Sbjct: 193 TAADYGLIDEVL 204
>gi|117921102|ref|YP_870294.1| ATP-dependent Clp protease proteolytic subunit [Shewanella sp.
ANA-3]
gi|166214711|sp|A0KYL9.1|CLPP_SHESA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|117613434|gb|ABK48888.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella sp.
ANA-3]
Length = 202
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 108/172 (62%), Positives = 135/172 (78%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G VE+ MAN+IVAQLL+L++ P+KDI +Y+NSPGGSVTAGMAI+
Sbjct: 27 DIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLESESPDKDIFLYINSPGGSVTAGMAIY 86
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+P+VSTVC+G AASMGAFLL+ G KGKR+ LPNSR+MIHQPLGG QG SDI +
Sbjct: 87 DTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRVMIHQPLGGFQGQASDIAI 146
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K LN LS HTGQ LE I DTDRD FMSA +A +YGL+D V+
Sbjct: 147 HAQEILGIKHKLNLMLSEHTGQPLEVIERDTDRDNFMSATQAVEYGLVDAVM 198
>gi|375111157|ref|ZP_09757368.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alishewanella
jeotgali KCTC 22429]
gi|393762608|ref|ZP_10351235.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alishewanella
agri BL06]
gi|397169840|ref|ZP_10493267.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alishewanella
aestuarii B11]
gi|374568699|gb|EHR39871.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alishewanella
jeotgali KCTC 22429]
gi|392606843|gb|EIW89727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alishewanella
agri BL06]
gi|396088368|gb|EJI85951.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alishewanella
aestuarii B11]
Length = 201
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 140/172 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQLL+L++ +P KDI +Y+NSPGGSVTAG++I+
Sbjct: 24 DIYSRLLKERVIFLTGQVEDHMANLIVAQLLFLESENPEKDIYIYINSPGGSVTAGLSIY 83
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT+R+I+PD++TVCVG AASMGAFLLS GTKGKRY LPN+R+MIHQPLGG QG +D ++
Sbjct: 84 DTMRYIKPDIATVCVGQAASMGAFLLSGGTKGKRYCLPNARVMIHQPLGGFQGQATDFEI 143
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K LN ++ H+G++ E++ +DT+RD F+SA++A DYGLID ++
Sbjct: 144 HAREILSIKEKLNRLMAEHSGKSYEQVCKDTERDNFLSAQQALDYGLIDAIL 195
>gi|261822507|ref|YP_003260613.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
wasabiae WPP163]
gi|261606520|gb|ACX89006.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pectobacterium wasabiae WPP163]
gi|385872815|gb|AFI91335.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium sp.
SCC3193]
Length = 207
Score = 223 bits (567), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 136/177 (76%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN++VAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERIIFLTGQVEDHMANLVVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRICLPNSRVMIHQPLGGFQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++ A E+L KA +N ++ HTGQ LE I DT+RD F+SA EA +YGL+D V N
Sbjct: 149 IEIHAKEILKVKAKMNELMAKHTGQPLEAIERDTERDRFLSASEAVEYGLVDSVFTN 205
>gi|336311088|ref|ZP_08566055.1| ATP-dependent Clp protease proteolytic subunit [Shewanella sp.
HN-41]
gi|335865304|gb|EGM70330.1| ATP-dependent Clp protease proteolytic subunit [Shewanella sp.
HN-41]
Length = 202
Score = 223 bits (567), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 136/175 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VE+ MAN+IVAQLL+L++ P+KDI +Y+NSPGGSVTAGM
Sbjct: 24 RSYDIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLESESPDKDIFLYINSPGGSVTAGM 83
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+P+VSTVC+G AASMGAFLL+ G KGKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 84 AIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRVMIHQPLGGFQGQASD 143
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E++ K LN L+ HTGQ LE I DTDRD FMSA +A DYGL+D V+
Sbjct: 144 IAIHAQEIIGIKNKLNLMLAEHTGQPLEVIERDTDRDNFMSATQAVDYGLVDAVM 198
>gi|239618479|ref|YP_002941801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kosmotoga
olearia TBF 19.5.1]
gi|239507310|gb|ACR80797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kosmotoga
olearia TBF 19.5.1]
Length = 206
Score = 223 bits (567), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 104/202 (51%), Positives = 150/202 (74%), Gaps = 8/202 (3%)
Query: 90 PYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAV 149
P +P Y +G G R ++ ++L RII G P++D+++NI+VAQLL+L++
Sbjct: 7 PVVP-YVVENKGRGE------RIYDIFTKLLSERIIFLGWPLDDEISNIVVAQLLFLESQ 59
Query: 150 DPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYS 209
DP+KDI +Y+NSPGGSVT+G+AI+DT+++I+PDVST+C+G+AASM A +L+ G+KGKR++
Sbjct: 60 DPDKDISIYINSPGGSVTSGLAIYDTMQYIKPDVSTICIGMAASMAAVILAGGSKGKRFA 119
Query: 210 LPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFF 269
LP+SRIMIHQP GGA+G DI+++ E+L + +N LS+HT Q EKI EDTDRDF+
Sbjct: 120 LPHSRIMIHQPWGGAEGTAKDIEIRTRELLFIRDQINEILSHHTNQPKEKIEEDTDRDFY 179
Query: 270 MSAEEAKDYGLIDGVVMNPHKI 291
MS EA YGL+D V+ P K+
Sbjct: 180 MSPAEAVKYGLVDKVI-EPRKL 200
>gi|145589117|ref|YP_001155714.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145047523|gb|ABP34150.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 209
Score = 223 bits (567), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 105/192 (54%), Positives = 150/192 (78%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
+G G PM++ R ++ S+L + R++ G V D AN+++AQLL+L++ +P+K
Sbjct: 14 KGLGLVPMVIETSGRGERAYDIYSRLLRERVVFLVGEVNDQTANLVIAQLLFLESENPDK 73
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI +Y+NSPGGSV+AG+AI+DT++ I+P VST+C+G+AASMGAFLL AG KGKRY+LPNS
Sbjct: 74 DISLYINSPGGSVSAGLAIYDTMQFIKPHVSTLCMGMAASMGAFLLCAGEKGKRYALPNS 133
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
R+MIHQPLGGA+G SDI++QA E+L+ + LN L+ TGQ+++ I +DTDRD FMSAE
Sbjct: 134 RVMIHQPLGGARGQASDIEIQAREILYLRERLNKILADRTGQSIDTIAKDTDRDNFMSAE 193
Query: 274 EAKDYGLIDGVV 285
+A++YGLID V+
Sbjct: 194 QAREYGLIDKVI 205
>gi|375089682|ref|ZP_09736007.1| ATP-dependent Clp protease proteolytic subunit [Facklamia languida
CCUG 37842]
gi|374566529|gb|EHR37768.1| ATP-dependent Clp protease proteolytic subunit [Facklamia languida
CCUG 37842]
Length = 202
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/177 (57%), Positives = 139/177 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ GPV+D+MAN ++AQLL+LDA DP+KDI +Y+NSPGGSVTAG+
Sbjct: 16 RAYDIYSRLLKDRIVMLSGPVDDNMANSVIAQLLFLDAQDPDKDIYLYINSPGGSVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT+ I+ DV T+ +G+AASM + LL+AGTKGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIFDTMNFIKADVQTIVIGMAASMASVLLAAGTKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++ A +L + LN LS TGQ L+ IN DTDRD FMSA++AK+YGL+D V+ N
Sbjct: 136 IEIAARHILKTRERLNQILSEATGQPLDVINRDTDRDNFMSADQAKEYGLVDEVMEN 192
>gi|253990891|ref|YP_003042247.1| ATP-dependent proteolytic subunit of clpA-ClpP serine protease,
heat shock protein F21.5 [Photorhabdus asymbiotica]
gi|253782341|emb|CAQ85505.1| ATP-dependent proteolytic subunit of clpA-ClpP serine protease,
heat shock protein F21.5 [Photorhabdus asymbiotica]
Length = 207
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/207 (51%), Positives = 148/207 (71%), Gaps = 7/207 (3%)
Query: 78 WSIRNDLEVPSSPYIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMAN 137
+S + D VP +P + G R ++ S+L + RII G VED MAN
Sbjct: 3 YSDKRDQYVPHMALVPMVIEQTARGE-------RSFDIYSRLLKERIIFLTGQVEDHMAN 55
Query: 138 IIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAF 197
+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DT++ I+PDVST+C+G A SMGAF
Sbjct: 56 LIVAQMLFLEAENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAF 115
Query: 198 LLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTL 257
LL+AG +GKR+ LPNSR+MIHQPLGG QG SDI++ A E+L K +N ++ HTG++L
Sbjct: 116 LLTAGAEGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAQEILKVKGRMNSLMAKHTGKSL 175
Query: 258 EKINEDTDRDFFMSAEEAKDYGLIDGV 284
E+I +DT+RD F+SA EA +YGL+D +
Sbjct: 176 EEIEKDTERDRFLSASEAVEYGLVDKI 202
>gi|113970830|ref|YP_734623.1| ATP-dependent Clp protease proteolytic subunit [Shewanella sp.
MR-4]
gi|123029527|sp|Q0HHA1.1|CLPP_SHESM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|113885514|gb|ABI39566.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella sp.
MR-4]
Length = 202
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/172 (62%), Positives = 135/172 (78%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + RII G VE+ MAN+IVAQLL+L++ P+KDI +Y+NSPGGSVTAGMAI+
Sbjct: 27 DIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLESESPDKDIFLYINSPGGSVTAGMAIY 86
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+P+VSTVC+G AASMGAFLL+ G KGKR+ LPNSR+MIHQPLGG QG SDI +
Sbjct: 87 DTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRVMIHQPLGGFQGQASDIAI 146
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K LN LS HTGQ LE I DTDRD FMSA +A +YGL+D V+
Sbjct: 147 HAQEILGIKHKLNLMLSEHTGQPLELIERDTDRDNFMSATQAVEYGLVDAVM 198
>gi|322378952|ref|ZP_08053366.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter suis
HS1]
gi|322379806|ref|ZP_08054103.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter suis
HS5]
gi|321147774|gb|EFX42377.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter suis
HS5]
gi|321148628|gb|EFX43114.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter suis
HS1]
Length = 197
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 147/200 (73%), Gaps = 7/200 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
YIP Y + G G R ++ S+L + RI+ G + D +A+ IVAQLL+L+A D
Sbjct: 3 YIP-YVIEKTGRGE------RSYDIYSRLLKDRIVLLSGEINDAVASTIVAQLLFLEAED 55
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P KDI +Y+NSPGGSVT+G++I+DT+ +I PD+ T+C+G AASMGAFLLS GTKGKR+SL
Sbjct: 56 PEKDINLYINSPGGSVTSGLSIYDTMNYIHPDICTICIGQAASMGAFLLSCGTKGKRFSL 115
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
P++RIMIHQPLGG +G ++I + E+L K LN ++ +TGQTLEKI +D+DRDFFM
Sbjct: 116 PHARIMIHQPLGGTEGQATNIAIYTKEILRLKNTLNQIMAENTGQTLEKIEQDSDRDFFM 175
Query: 271 SAEEAKDYGLIDGVVMNPHK 290
SAE+AK+YGL+D V+ K
Sbjct: 176 SAEDAKEYGLVDAVLSKSTK 195
>gi|218961379|ref|YP_001741154.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Candidatus Cloacamonas acidaminovorans]
gi|167730036|emb|CAO80948.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Candidatus Cloacamonas acidaminovorans str.
Evry]
Length = 194
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ GG +ED++AN +VAQLL+L+ DP +DI MY+NSPGG ++AG+
Sbjct: 16 RAYDIYSRLLKDRIVFVGGVIEDNLANTVVAQLLHLEGEDPERDIYMYINSPGGIISAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+P VST+C+G AASM A LL+AG GKR +LPNSRIMIHQP+GGAQG +D
Sbjct: 76 AIYDTMQYIKPRVSTICIGQAASMAAVLLAAGAPGKRSALPNSRIMIHQPMGGAQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L+ + +N L H+GQ++EKI EDT+R++FMSAEEA +YG+ID V+
Sbjct: 136 IEIQAKEILYLRGRMNEILHKHSGQSIEKIMEDTERNYFMSAEEAMEYGIIDEVI 190
>gi|148244363|ref|YP_001219057.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Vesicomyosocius okutanii HA]
gi|166214721|sp|A5CXJ8.1|CLPP_VESOH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146326190|dbj|BAF61333.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Vesicomyosocius okutanii HA]
Length = 198
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GP+ED MAN++VAQLL+L++ +P+KDI +Y+NSPGGSV+AG+
Sbjct: 21 RAYDIYSRLLKERIIFLVGPIEDYMANVVVAQLLFLESENPDKDIHLYINSPGGSVSAGL 80
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+ D+ST+C+G AASMGA LL+AGTKGKR++LPN R MIHQPLGG G SD
Sbjct: 81 AIYDTMQFIKSDISTLCIGQAASMGALLLTAGTKGKRFALPNVRCMIHQPLGGFSGQASD 140
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
+D+ A E+L +ANLN HTGQ ++ I +DTDRD FMSA+EA YGLID V+
Sbjct: 141 VDIHAQEILKVRANLNQIFKLHTGQVIKTIQKDTDRDNFMSADEATKYGLIDKVL 195
>gi|442771953|gb|AGC72625.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium A1Q1_fos_1134]
Length = 202
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/192 (54%), Positives = 146/192 (76%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
Q G PM++ R ++ S+L + R+I G V D AN++VAQLL+L++ +P+K
Sbjct: 7 QALGMIPMVIEQSGRGERSYDIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLESENPDK 66
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI Y+NSPGGSVTAGMAI+DT++ I+PDVST+C G AASMGAFLL+AG KGKR+SLPNS
Sbjct: 67 DISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCCGFAASMGAFLLAAGAKGKRFSLPNS 126
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
+IMIHQ LGGA+G +DI++ A ++L K +N L+ TGQ +EK+ +DT+RD+FM+A+
Sbjct: 127 KIMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPIEKVKQDTERDYFMTAD 186
Query: 274 EAKDYGLIDGVV 285
EAKDYG++D V+
Sbjct: 187 EAKDYGIVDQVI 198
>gi|71907348|ref|YP_284935.1| ATP-dependent Clp protease proteolytic subunit [Dechloromonas
aromatica RCB]
gi|110816458|sp|Q47FB6.1|CLPP_DECAR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|71846969|gb|AAZ46465.1| ATP-dependent Clp protease proteolytic subunit ClpP [Dechloromonas
aromatica RCB]
Length = 209
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPV D AN++VAQLL+L+A +P+KDI Y+NSPGGSVTAGM
Sbjct: 29 RAYDIYSRLLKERVIFLVGPVNDVTANLVVAQLLFLEAENPDKDIYFYINSPGGSVTAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G AASMGAFLL+AG KGKR++LPNSR+MIHQPLGG QG SD
Sbjct: 89 SIYDTMQFIKPDVSTLCIGQAASMGAFLLNAGAKGKRFALPNSRVMIHQPLGGFQGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L + LN ++ H+GQ LE+I +DTDRD F+SA EA +YGLID V+
Sbjct: 149 IAIHAKEILSIRDRLNRIMAEHSGQPLERIEKDTDRDNFLSAAEAAEYGLIDKVL 203
>gi|27363512|ref|NP_759040.1| ATP-dependent Clp protease proteolytic subunit [Vibrio vulnificus
CMCP6]
gi|37679288|ref|NP_933897.1| ATP-dependent Clp protease proteolytic subunit [Vibrio vulnificus
YJ016]
gi|320156969|ref|YP_004189348.1| ATP-dependent Clp protease proteolytic subunit [Vibrio vulnificus
MO6-24/O]
gi|27359628|gb|AAO08567.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
vulnificus CMCP6]
gi|37198031|dbj|BAC93868.1| ATP-dependent Clp protease, proteolytic subunit [Vibrio vulnificus
YJ016]
gi|319932281|gb|ADV87145.1| ATP-dependent Clp protease proteolytic subunit [Vibrio vulnificus
MO6-24/O]
Length = 208
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 136/175 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN++VAQLL+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+P+VSTVC+G A SMGAFLL+ G GKRY LPNSR+MIHQPLGG QG SD
Sbjct: 89 SIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ HTGQ LE I DTDRD FMSA++A +YGL+D V+
Sbjct: 149 IQIHAQEILTIKTKLNKLLAEHTGQPLEVIERDTDRDNFMSADQAVEYGLVDAVL 203
>gi|452077351|gb|AGF93313.1| ATP-dependent Clp protease, proteolytic subunit ClpP [uncultured
organism]
Length = 205
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ GPV D+++NII+AQ+LYL+A +P++DI +Y+N+ GG VT G+
Sbjct: 20 RTYDIYSRLLKDRIVFLKGPVTDELSNIIIAQMLYLEAENPSQDINLYINTQGGVVTGGL 79
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++++P+V T+CVG A+SMGA LL+ G GKRY+LPNSRI+IHQPLGGAQG +D
Sbjct: 80 AIYDTMQYVKPEVKTICVGQASSMGALLLATGEPGKRYALPNSRILIHQPLGGAQGQATD 139
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
+++ ANE++ K +N L+ HTGQ L+KI EDT+RDFFM+ EEA+DYG+ID V+
Sbjct: 140 VEIHANELVKVKKRVNNILADHTGQPLDKIQEDTERDFFMAPEEAEDYGIIDEVI 194
>gi|52082006|ref|YP_080797.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|319647870|ref|ZP_08002088.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus sp.
BT1B_CT2]
gi|404490886|ref|YP_006714992.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|423684010|ref|ZP_17658849.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
licheniformis WX-02]
gi|67460468|sp|Q65EI5.1|CLPP1_BACLD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|52005217|gb|AAU25159.1| ATP-dependent Clp protease proteolytic subunit (class III
heat-shock protein) [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52349895|gb|AAU42529.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|317390211|gb|EFV71020.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus sp.
BT1B_CT2]
gi|383440784|gb|EID48559.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
licheniformis WX-02]
Length = 198
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L+A DP KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+P VST+C G+AASMGAFLL+AG KGKRY+LPNS +MIHQPLGGAQG ++
Sbjct: 76 AIYDTMQFIKPQVSTICTGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +L + LN L+ TGQ LE I DTDRD F +AEEAK+YGLID V+
Sbjct: 136 IEIAAKRILSLRDKLNKILAERTGQPLEVIERDTDRDNFKTAEEAKEYGLIDKVL 190
>gi|374623544|ref|ZP_09696052.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Ectothiorhodospira sp. PHS-1]
gi|373942653|gb|EHQ53198.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Ectothiorhodospira sp. PHS-1]
Length = 216
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/183 (57%), Positives = 143/183 (78%), Gaps = 1/183 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPVED MAN+IVAQLL+L++ +P+KDI +Y+NSPGG VTAG+
Sbjct: 33 RAYDIYSRLLKERVIFVVGPVEDYMANVIVAQLLFLESENPDKDISLYINSPGGVVTAGL 92
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C+G AASMGA LL+ G GKRY LP+SR+MIHQPLGG QG +D
Sbjct: 93 AIYDTMQFIKPDVSTLCIGQAASMGAVLLAGGAAGKRYCLPHSRVMIHQPLGGFQGQATD 152
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
ID+ A E+L + LNG LS HTGQ +E+I +DT+RD F+SA +A++YG+ID V+
Sbjct: 153 IDIHAREILKVRDQLNGILSKHTGQPVERIEQDTERDRFLSATDAQEYGIIDK-VLETRS 211
Query: 291 ILQ 293
+LQ
Sbjct: 212 LLQ 214
>gi|452820068|gb|EME27116.1| ATP-dependent Clp protease, protease subunit [Galdieria
sulphuraria]
Length = 293
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/195 (55%), Positives = 148/195 (75%), Gaps = 1/195 (0%)
Query: 105 PPMLLGRFQ-NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPG 163
P + +G Q ++ S+L + RI+ G V+D++AN +VAQ+L+L DP+KDI +Y+NSPG
Sbjct: 97 PTVYMGDTQMDIYSRLAKDRILLLGRAVDDEVANALVAQMLFLANEDPSKDITLYINSPG 156
Query: 164 GSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGG 223
GSV+AG+A++DT++ I DVSTVC G AASM AFLL AGTKGKR SLPN+RIMIHQPLGG
Sbjct: 157 GSVSAGLAVYDTMQFIPCDVSTVCFGTAASMAAFLLGAGTKGKRKSLPNARIMIHQPLGG 216
Query: 224 AQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDG 283
AQG +DI++QA E+L K+ LN Y++ +TG+ LEKI +DTDRDFFM+ EEA +YG+ID
Sbjct: 217 AQGQAADIEIQAREILFIKSLLNTYMADYTGKPLEKIEQDTDRDFFMTPEEALEYGMIDE 276
Query: 284 VVMNPHKILQPVAAA 298
V+ + +P A
Sbjct: 277 VIQTKKVLAKPQKPA 291
>gi|170760538|ref|YP_001788551.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum A3 str. Loch Maree]
gi|226706446|sp|B1L1D7.1|CLPP_CLOBM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|169407527|gb|ACA55938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum A3 str. Loch Maree]
Length = 194
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII V D A++IVAQLL+L+A DP+KDI +Y+NSPGGS+T+GM
Sbjct: 16 RSYDIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG+AASMGAFLL AG KGKRY+LPNS +MIHQPLGG QG +D
Sbjct: 76 AIYDTMQYIKPDVSTICVGMAASMGAFLLVAGAKGKRYALPNSEVMIHQPLGGFQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A +L K LN LS TG+ LE++ DT+RD F+SAEEAK+YGLID V+
Sbjct: 136 IGIHAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEAKEYGLIDEVI 190
>gi|242240292|ref|YP_002988473.1| ATP-dependent Clp protease proteolytic subunit ClpP [Dickeya
dadantii Ech703]
gi|242132349|gb|ACS86651.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya
dadantii Ech703]
Length = 207
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDYMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ HTGQ+L+ I DT+RD F+SA EA +YGL+D V+
Sbjct: 149 IEIHAKEILKVKARMNELMAKHTGQSLDIIERDTERDRFLSAGEAVEYGLVDSVL 203
>gi|398798176|ref|ZP_10557477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
GM01]
gi|398100893|gb|EJL91121.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
GM01]
Length = 207
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AGTKGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMKFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L K +N ++ HTG++LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 149 IEIHAREILKVKQRMNELMAEHTGKSLEEIERDTERDRFLSAGEAVEYGLVDSIL 203
>gi|149376712|ref|ZP_01894470.1| ATP-dependent Clp protease proteolytic subunit [Marinobacter
algicola DG893]
gi|149358951|gb|EDM47417.1| ATP-dependent Clp protease proteolytic subunit [Marinobacter
algicola DG893]
Length = 227
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 138/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I GPVED MAN+IVAQLL+L++ +P+KDI +Y+NSPGGSVTAGM+I+
Sbjct: 49 DIFSRLLKERVIFLVGPVEDHMANLIVAQLLFLESENPDKDIHLYINSPGGSVTAGMSIY 108
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDV+T+CVG AASMGAFLL+ G +GKR LPNSR+MIHQPLGG QG +DI++
Sbjct: 109 DTMQFIKPDVATLCVGQAASMGAFLLAGGAEGKRACLPNSRVMIHQPLGGYQGQATDIEI 168
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
E+L + LN L++HTGQ L+ I +DTDRD FM ++AKDYGLID ++
Sbjct: 169 HTREILKIRHTLNSILAHHTGQKLDTIAKDTDRDNFMDPQQAKDYGLIDSIL 220
>gi|384084583|ref|ZP_09995758.1| ATP-dependent Clp protease proteolytic subunit [Acidithiobacillus
thiooxidans ATCC 19377]
Length = 214
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/192 (56%), Positives = 144/192 (75%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
QG G P+++ R ++ S+L + R+I G VED MAN++VAQLL+L+A +P+K
Sbjct: 14 QGLGYVPIVVEQTGRGERSYDIYSRLLKERVIFMVGQVEDMMANLVVAQLLFLEAENPDK 73
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI +Y+NSPGGSVTAGMAI+DT++ IRP VSTVC+G AASMGA LL+AG +GKRY+LPN+
Sbjct: 74 DIALYINSPGGSVTAGMAIYDTMQFIRPKVSTVCIGQAASMGAVLLAAGAEGKRYALPNA 133
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
RIM+HQP GG QG DI++ E+L + LN L +HTGQ+ E+I +D DRDFFMSAE
Sbjct: 134 RIMLHQPSGGFQGQAHDIEIHTKEILRIRERLNDILVHHTGQSRERIEQDLDRDFFMSAE 193
Query: 274 EAKDYGLIDGVV 285
EA+ Y L+D V+
Sbjct: 194 EAQTYHLVDAVI 205
>gi|163857103|ref|YP_001631401.1| ATP-dependent Clp protease proteolytic subunit [Bordetella petrii
DSM 12804]
gi|226706441|sp|A9IR54.1|CLPP_BORPD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|163260831|emb|CAP43133.1| ATP-dependent Clp protease proteolytic subunit [Bordetella petrii]
Length = 217
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPV D+ AN+IVAQLL+L++ +P+KDI +Y+NSPGGSV AGM
Sbjct: 37 RAYDIYSRLLRERLIFLVGPVNDNTANLIVAQLLFLESENPDKDISLYINSPGGSVYAGM 96
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ ++PDVST+C GLAASMGAFLL+AG KGKR++LPNSRIMIHQP GGAQG SD
Sbjct: 97 AIYDTMQFVKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRIMIHQPSGGAQGQASD 156
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I +QA E+L + LN L+ +TGQ +E+I DT+RD FMSAE+A YGL+D V+
Sbjct: 157 IQIQAREILDLRERLNRILAENTGQPVERIAVDTERDNFMSAEDAVSYGLVDKVL 211
>gi|433324497|ref|ZP_20401784.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
J96]
gi|432347011|gb|ELL41475.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
J96]
Length = 207
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 138/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQANDIEI 151
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N ++ HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|294635324|ref|ZP_06713821.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Edwardsiella
tarda ATCC 23685]
gi|291091300|gb|EFE23861.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Edwardsiella
tarda ATCC 23685]
Length = 194
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 16 RSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYINSPGGVITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMG+FLL+AG +GKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 76 SIYDTMQFIKPDVSTICMGQACSMGSFLLAAGAQGKRFCLPNSRVMIHQPLGGFQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ H+GQ LE I DT+RD FMSA+EA DYGL+D V+
Sbjct: 136 IEIHAKEILSIKARMNTLMAKHSGQPLEVIERDTERDRFMSAQEAVDYGLVDAVL 190
>gi|223994545|ref|XP_002286956.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220978271|gb|EED96597.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 260
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/187 (59%), Positives = 142/187 (75%), Gaps = 5/187 (2%)
Query: 104 PPPMLL----GRFQ-NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMY 158
PPP L G Q +V+S+L + RI+ G V D++AN++VAQLLYL DP KDI +Y
Sbjct: 57 PPPTLPTVEGGSGQLDVISRLLKDRILLLGTDVNDEVANVLVAQLLYLANEDPEKDITLY 116
Query: 159 LNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIH 218
+NSPGGSV+AG+AI+DT++ I DV TVC G+AASMGAFLL AG GKR SLPN+RIMIH
Sbjct: 117 INSPGGSVSAGLAIYDTMQFIPCDVQTVCFGMAASMGAFLLGAGAPGKRKSLPNARIMIH 176
Query: 219 QPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDY 278
QPLGGAQG +DI++QA E+L KA LN Y++ + Q +EKI EDTDRDFFM+ EA+DY
Sbjct: 177 QPLGGAQGQAADIEIQAKEILFVKACLNKYIAEYCDQPVEKIEEDTDRDFFMTPYEAQDY 236
Query: 279 GLIDGVV 285
G+ID V+
Sbjct: 237 GIIDEVI 243
>gi|354583587|ref|ZP_09002485.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
lactis 154]
gi|353197467|gb|EHB62948.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
lactis 154]
Length = 196
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 136/180 (75%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII ++DD+AN+++AQLL+L A DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKDRIIFLSNAIDDDVANLVIAQLLFLAAEDPEKDISLYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
I+DT++ I+PDVST+CVG+AASMG+ LL+AG GKRY+L NS +MIHQPLGG QG SD
Sbjct: 76 GIYDTMQLIKPDVSTICVGMAASMGSLLLTAGAPGKRYALENSEVMIHQPLGGIQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I + A+ ++ + LN TGQ LEKI DTDRDFFMSAEEAK YG+ID V+ +P K
Sbjct: 136 IQIHADWIIKTRQKLNQIYVERTGQPLEKIERDTDRDFFMSAEEAKAYGIIDEVLSSPTK 195
>gi|150388889|ref|YP_001318938.1| ATP-dependent Clp protease proteolytic subunit [Alkaliphilus
metalliredigens QYMF]
gi|167008644|sp|A6TM61.1|CLPP_ALKMQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|149948751|gb|ABR47279.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alkaliphilus
metalliredigens QYMF]
Length = 194
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G + D A+++VAQLL+L+A DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RSYDIFSRLLKERIIFLGDEINDVTASLLVAQLLFLEAEDPDKDIQIYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ +I+PDVST+CVG+AASMGAFLL+AG KGKR++LPN+ +MIHQPLGG +G D
Sbjct: 76 AIYDTMNYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNAEVMIHQPLGGTRGQAED 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A ++ + LN L TGQ LE++ +DTDRDFFM A+EAK+YG+ID V+
Sbjct: 136 IRIHAERIVKLRDTLNKILVERTGQPLERVQKDTDRDFFMEAKEAKEYGIIDEVI 190
>gi|54309798|ref|YP_130818.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
profundum SS9]
gi|46914236|emb|CAG21016.1| putative gi|27363512|ref|NP_759040.1| ATP-dependent Clp protease,
proteolytic subunit [Vibrio vulnificus CMCP6]
[Photobacterium profundum SS9]
Length = 207
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN++VAQLL+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+P+VSTVC+G A SMGAFLL+ G KGKRY LPNSR+MIHQPLGG QG SD
Sbjct: 89 SIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRVMIHQPLGGFQGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ HTGQ LE + DTDRD FMSA++A +YGL+D V+
Sbjct: 149 IQIHAKEILTIKHRLNSLLAKHTGQPLEVVEGDTDRDNFMSADQAVEYGLVDSVL 203
>gi|254492068|ref|ZP_05105244.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylophaga
thiooxidans DMS010]
gi|224462732|gb|EEF79005.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylophaga
thiooxydans DMS010]
Length = 212
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPVED MAN+IVAQLL+L++ +P+KDI +Y+NSPGG+VTAGM
Sbjct: 30 RSYDIYSRLLKERVIFLVGPVEDQMANLIVAQLLFLESENPDKDIHLYINSPGGAVTAGM 89
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ ++P+VST+C+G AASMGA LL+ G +GKR+ LPNSRIM+HQPLGG QG SD
Sbjct: 90 AIYDTMQFVKPNVSTLCIGQAASMGAVLLAGGAEGKRHCLPNSRIMVHQPLGGFQGQASD 149
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
D+ A E+L + LNG L++HTGQ +E I DTDRD FM+ E+A +YGLID V+
Sbjct: 150 FDIHAKEILSIRDRLNGILAHHTGQDIEAIRRDTDRDNFMNGEQALEYGLIDSVL 204
>gi|88860444|ref|ZP_01135082.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
tunicata D2]
gi|88817642|gb|EAR27459.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
tunicata D2]
Length = 205
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 136/175 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQLL+L++ +P KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKERVIFLTGQVEDHMANLIVAQLLFLESENPEKDIFIYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+P+VSTVC+G AASMGAFLLS GTKGKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 85 AIYDTMNFIKPNVSTVCMGQAASMGAFLLSGGTKGKRFCLPNSRVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
++ A E+L K LN L+ HTGQ +E I+ DTDRD FMS +A +YG++D V+
Sbjct: 145 FEIHAREILSIKDKLNRLLAEHTGQPIEVISRDTDRDNFMSGAQAVEYGIVDAVL 199
>gi|333372559|ref|ZP_08464484.1| ATP-dependent Clp protease, protease subunit [Desmospora sp. 8437]
gi|332972924|gb|EGK10866.1| ATP-dependent Clp protease, protease subunit [Desmospora sp. 8437]
Length = 206
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 136/175 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G + D +AN IVAQ+L+L DPNKDI +Y+NSPGGS++AG
Sbjct: 28 RSYDIYSRLLKDRIIFLGSEINDAVANTIVAQMLFLQTEDPNKDIQLYINSPGGSISAGF 87
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++H++ D+ T+C+G+AASMGAFLLS+GTKGKR +LPNS +MIHQPLGGAQG SD
Sbjct: 88 AIYDTMQHVKCDIQTICIGMAASMGAFLLSSGTKGKRLALPNSEVMIHQPLGGAQGQASD 147
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +L + LN LS TGQ L+KI +DTDRD FMSAE+AK YGLID ++
Sbjct: 148 IEISAKRILRMRDRLNQLLSDQTGQPLKKIQQDTDRDHFMSAEDAKKYGLIDKII 202
>gi|157413171|ref|YP_001484037.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9215]
gi|254526501|ref|ZP_05138553.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9202]
gi|157387746|gb|ABV50451.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9215]
gi|221537925|gb|EEE40378.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9202]
Length = 195
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/187 (60%), Positives = 139/187 (74%), Gaps = 5/187 (2%)
Query: 99 EQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMY 158
E+ GG R ++ S+L + RII G V + AN IVAQLL+L+A DP KDI MY
Sbjct: 7 EESGGSE-----RVFDIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPEKDIYMY 61
Query: 159 LNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIH 218
+NSPGGSV G+ IFDT++H++PD+ TVCVGLAASMGAFLL+AGTKGKR SL +SRIMIH
Sbjct: 62 INSPGGSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIH 121
Query: 219 QPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDY 278
QPLGGA+G SDI +QA+E+L K LN LS TG+ E I EDTDRDF+MS +EA +Y
Sbjct: 122 QPLGGARGQASDIRIQADEILFLKERLNTELSERTGKDFETIKEDTDRDFYMSPKEAVEY 181
Query: 279 GLIDGVV 285
GLID V+
Sbjct: 182 GLIDLVL 188
>gi|115374875|ref|ZP_01462148.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|115368093|gb|EAU67055.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
Length = 204
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/187 (56%), Positives = 146/187 (78%), Gaps = 4/187 (2%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G ++DD++N IV+QLL+L++ DP+KDI +Y+NSPGGSVTAG+
Sbjct: 15 RSYDIYSRLLKDRIVMLGTEIDDDVSNAIVSQLLFLESEDPDKDINLYINSPGGSVTAGL 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++++ VST+C+G AASMGA LL AG KGKRYSLP+SRIMIHQPLGG +G +D
Sbjct: 75 AIYDTMQYVKCPVSTICIGQAASMGAVLLLAGAKGKRYSLPSSRIMIHQPLGGVRGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L +A LN + HTGQ LE++ +DTDRD++M A E+K YG+ID + NP K
Sbjct: 135 IEIQAKEILRMRAKLNDLIVKHTGQPLERVEKDTDRDYYMGATESKAYGIIDE-IQNPRK 193
Query: 291 ILQPVAA 297
PVAA
Sbjct: 194 ---PVAA 197
>gi|344199551|ref|YP_004783877.1| ATP-dependent Clp protease proteolytic subunit [Acidithiobacillus
ferrivorans SS3]
gi|343774995|gb|AEM47551.1| ATP-dependent Clp protease proteolytic subunit [Acidithiobacillus
ferrivorans SS3]
Length = 214
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/192 (56%), Positives = 143/192 (74%), Gaps = 6/192 (3%)
Query: 100 QGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNK 153
QG G P+++ R ++ S+L + R+I G VED MAN++VAQLL+L+A +P+K
Sbjct: 14 QGLGYVPIVVEQTGRGERSYDIYSRLLKERVIFMVGQVEDMMANLVVAQLLFLEAENPDK 73
Query: 154 DIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNS 213
DI +Y+NSPGGSVTAGMAI+DT++ +RP VSTVC+G AASMGA LL+AG +GKRY+LPN+
Sbjct: 74 DIALYINSPGGSVTAGMAIYDTMQFVRPKVSTVCIGQAASMGAVLLAAGAEGKRYALPNA 133
Query: 214 RIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAE 273
RIM+HQP GG QG DI++ E+L + LN L +HTGQ E+I +D DRDFFMSAE
Sbjct: 134 RIMLHQPSGGFQGQAHDIEIHTKEILRIRERLNDILVHHTGQDRERIEQDLDRDFFMSAE 193
Query: 274 EAKDYGLIDGVV 285
EAK Y L+D V+
Sbjct: 194 EAKTYHLVDAVI 205
>gi|311280666|ref|YP_003942897.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
cloacae SCF1]
gi|308749861|gb|ADO49613.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
cloacae SCF1]
Length = 207
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 138/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L KA +N ++ HTGQ+L +I DT+RD F+SA EA +YGL+D ++
Sbjct: 152 HAREILKVKARMNELMAQHTGQSLAQIESDTERDRFLSAPEAVEYGLVDSIL 203
>gi|157962502|ref|YP_001502536.1| ATP-dependent Clp protease proteolytic subunit [Shewanella pealeana
ATCC 700345]
gi|189082466|sp|A8H614.1|CLPP_SHEPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157847502|gb|ABV88001.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
pealeana ATCC 700345]
Length = 203
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 136/175 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VE+ MAN+IVAQLL+L++ P+KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESESPDKDIYLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+P+VSTVC+G AASMGAFLL+ G +GKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 85 AIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAEGKRHCLPNSRVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ HTGQ LE I DTDRD FMSA EA +YGL+D V+
Sbjct: 145 IAIHAQEILGIKNKLNTMLAEHTGQPLEVIERDTDRDNFMSATEAAEYGLVDSVI 199
>gi|375264871|ref|YP_005022314.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. EJY3]
gi|369840195|gb|AEX21339.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. EJY3]
Length = 208
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 136/175 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN++VAQLL+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+P+VSTVC+G A SMGAFLL+ G GKRY LPNSR+MIHQPLGG QG SD
Sbjct: 89 SIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ HTGQ LE I DTDRD FMSAE+A +YG++D V+
Sbjct: 149 IQIHAQEILTIKQKLNKLLAEHTGQPLEVIERDTDRDNFMSAEQAVEYGIVDAVL 203
>gi|158321199|ref|YP_001513706.1| ATP-dependent Clp protease proteolytic subunit [Alkaliphilus
oremlandii OhILAs]
gi|167008645|sp|A8MIS8.1|CLPP_ALKOO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|158141398|gb|ABW19710.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alkaliphilus
oremlandii OhILAs]
Length = 195
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 136/180 (75%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII V D A+++VAQLL+L++ DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RSYDIYSRLLKERIIFLSDEVNDATASLVVAQLLFLESEDPDKDIQLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ +I+PDVST+C+G+AASMGAFLL+AG KGKR++LPN+ IMIHQPLGG +G D
Sbjct: 76 AIYDTMNYIKPDVSTICIGMAASMGAFLLTAGQKGKRFALPNAEIMIHQPLGGTRGQAED 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I + +L + LN ++ TGQ LEK+ +DTDRDFFM AEEA+ YG+ID V+ K
Sbjct: 136 IRIHTERILKMRETLNKIIAERTGQPLEKVQKDTDRDFFMEAEEARAYGIIDEVITTAKK 195
>gi|451967071|ref|ZP_21920318.1| ATP-dependent Clp protease proteolytic subunit [Edwardsiella tarda
NBRC 105688]
gi|451314224|dbj|GAC65680.1| ATP-dependent Clp protease proteolytic subunit [Edwardsiella tarda
NBRC 105688]
Length = 206
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 28 RSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYINSPGGVITAGM 87
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMG+FLL+AG +GKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 88 SIYDTMQFIKPDVSTICMGQACSMGSFLLAAGAQGKRFCLPNSRVMIHQPLGGFQGQATD 147
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L KA +N ++ H+GQ LE I DT+RD FMSA+EA DYGL+D V+
Sbjct: 148 IEIHAKEILSIKARMNTLMAKHSGQPLEVIERDTERDRFMSAQEAVDYGLVDAVL 202
>gi|56414396|ref|YP_151471.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|197363316|ref|YP_002142953.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
gi|67460194|sp|Q5PFN4.1|CLPP_SALPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|226706471|sp|B5BD83.1|CLPP_SALPK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56128653|gb|AAV78159.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|197094793|emb|CAR60326.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
Length = 207
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAG++I+
Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGISIY 91
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +DI++
Sbjct: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K +N +++HTGQ+LE+I DT+RD F+SA EA +YGL+D ++
Sbjct: 152 HAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|33864600|ref|NP_896159.1| ATP-dependent Clp protease proteolytic subunit 2 [Synechococcus sp.
WH 8102]
gi|67460511|sp|Q7UA36.1|CLPP1_SYNPX RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|33632123|emb|CAE06579.1| ATP-dependent Clp protease proteolytic subunit 2 [Synechococcus sp.
WH 8102]
Length = 224
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V+D +A+ +VAQ+L+L+A DP KDI +Y+NSPGGSVTAG+
Sbjct: 38 RAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGL 97
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ + PDV T+C GLAASMGAFLLS G KGKR +LPN+RIMIHQPLGGAQG D
Sbjct: 98 AIYDTMQQVAPDVVTICYGLAASMGAFLLSGGCKGKRLALPNARIMIHQPLGGAQGQAVD 157
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++QA E+L K LNG ++ HTGQ L+KI EDTDRD+F+S EA YGLID VV
Sbjct: 158 IEIQAKEILFLKETLNGLMADHTGQPLDKIAEDTDRDYFLSPAEAVQYGLIDRVV 212
>gi|90410782|ref|ZP_01218797.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
profundum 3TCK]
gi|90328413|gb|EAS44711.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
profundum 3TCK]
Length = 207
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN++VAQLL+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+P+VSTVC+G A SMGAFLL+ G KGKRY LPNSR+MIHQPLGG QG SD
Sbjct: 89 SIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRVMIHQPLGGFQGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ HTGQ LE + DTDRD FMSA++A +YGL+D V+
Sbjct: 149 IQIHAQEILTIKQRLNNLLAEHTGQPLEIVEGDTDRDNFMSADQAVEYGLVDSVL 203
>gi|407007733|gb|EKE23312.1| hypothetical protein ACD_6C00528G0009 [uncultured bacterium]
Length = 201
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/172 (59%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED+MAN+IVAQ+L+L+A +P+KDI +Y+NSPGGSVTAGMAI+
Sbjct: 26 DIYSRLLRERVIFMTGEVEDNMANLIVAQMLFLEAENPDKDIHLYINSPGGSVTAGMAIY 85
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDV T C+G AASMGAFLL+AGTKGKRY L N+R+MIHQPLGG +G SDI++
Sbjct: 86 DTMQFIKPDVVTYCMGQAASMGAFLLNAGTKGKRYCLENARVMIHQPLGGFRGQASDIEI 145
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K LN ++ H+GQ EK+ DTDRD FM+A++AK+YGL+D V+
Sbjct: 146 HAREILFIKERLNRLMAEHSGQDYEKVARDTDRDNFMTAQQAKEYGLVDEVL 197
>gi|374583503|ref|ZP_09656597.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus youngiae DSM 17734]
gi|374419585|gb|EHQ92020.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus youngiae DSM 17734]
Length = 205
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 143/178 (80%), Gaps = 3/178 (1%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GG ++ D+AN+IVAQ+L+L+A DP KDI +Y+NSPGGS+TAGM
Sbjct: 17 RSYDIYSRLLKDRIIFLGGAIDADVANLIVAQMLFLEAEDPEKDINLYINSPGGSITAGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPL---GGAQGG 227
AI+DT+++IR DV T+C+G+AASMGAFLL++GTKGKR +LPNS ++IHQPL GG G
Sbjct: 77 AIYDTMQYIRSDVRTICIGMAASMGAFLLASGTKGKRVALPNSEVLIHQPLIGGGGLSGQ 136
Query: 228 QSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
++I++ A ++L KA +N L+ TGQ +EK+ +DTDRD++M+AEEAK+YGL+D V+
Sbjct: 137 ATEIEIHAKQLLRTKAKMNKILAERTGQPIEKVEKDTDRDYYMTAEEAKEYGLVDQVL 194
>gi|254507754|ref|ZP_05119885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus 16]
gi|219549279|gb|EED26273.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus 16]
Length = 208
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 136/175 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN++VAQLL+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 29 RSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+P+VSTVC+G A SMGAFLL+ G GKRY LPNSR+MIHQPLGG QG SD
Sbjct: 89 SIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ HTGQ LE I DTDRD FM+AE+A +YGL+D V+
Sbjct: 149 IQIHAQEILTIKQKLNKLLAEHTGQPLEVIERDTDRDNFMAAEQAVEYGLVDAVL 203
>gi|332706287|ref|ZP_08426354.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
gi|332354935|gb|EGJ34408.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
Length = 198
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/172 (60%), Positives = 141/172 (81%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ ++L++ RII G V+D++ N I+A +LYLD+ D +KDII+Y+NSPGGSVTAGMAI+
Sbjct: 22 DIYNRLYRERIIFLGKEVDDEITNQIIAVMLYLDSEDNSKDIILYINSPGGSVTAGMAIY 81
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HI+ DV TVCVGLAASMG+FLL+AG KGKR +LP+SRIMIHQP GG +G +DI++
Sbjct: 82 DTMQHIKSDVVTVCVGLAASMGSFLLAAGKKGKRIALPHSRIMIHQPSGGTRGQATDIEI 141
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
+A E+L + LN + +TGQ+LEKI +D DRDFFMSA+EAK+YGLID V+
Sbjct: 142 EAREILRIRHQLNEIYAQNTGQSLEKIEKDMDRDFFMSADEAKEYGLIDQVI 193
>gi|387928693|ref|ZP_10131371.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
methanolicus PB1]
gi|387588279|gb|EIJ80601.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
methanolicus PB1]
Length = 201
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +AN IVAQLL+L+A +P KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIMLGTPIDDYVANSIVAQLLFLEAENPEKDISIYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDV T+C+G+AASMGAFLL+AGTKGKRY+LPNS +MIHQPLGGAQG ++
Sbjct: 76 AIYDTMQFIKPDVQTICIGMAASMGAFLLAAGTKGKRYALPNSEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +L + LN LS TGQ +E I +DTDRD FM+A++A +YGL+D ++
Sbjct: 136 IEIAAKRILFLRDKLNKILSERTGQPVEVIAKDTDRDNFMTAQQALEYGLVDHII 190
>gi|283955633|ref|ZP_06373126.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 1336]
gi|419640996|ref|ZP_14172909.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23357]
gi|283792858|gb|EFC31634.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 1336]
gi|380618530|gb|EIB37656.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23357]
Length = 194
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/180 (57%), Positives = 139/180 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G + D++A IVAQLL+L+A DP KDI +Y+NSPGG +T+G
Sbjct: 15 RSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLYINSPGGVITSGF 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ +I+PDV T+C+G AASMGAFLLS G +GKR++LPNSRIMIHQPLGGA+G +D
Sbjct: 75 SIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRFALPNSRIMIHQPLGGARGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L K LN L+ +T Q + KI +DT+RDFFMSA+EAK+YGLID V+ K
Sbjct: 135 IEIQAKEILRLKTILNDILAKNTKQKVTKIAKDTERDFFMSAQEAKEYGLIDKVLEKSFK 194
>gi|374307960|ref|YP_005054391.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Filifactor
alocis ATCC 35896]
gi|374308266|ref|YP_005054697.1| hypothetical protein [Filifactor alocis ATCC 35896]
gi|320120411|gb|EFE27574.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Filifactor
alocis ATCC 35896]
gi|320120478|gb|ADW16163.1| hypothetical protein HMPREF0389_01718 [Filifactor alocis ATCC
35896]
Length = 196
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 144/195 (73%), Gaps = 7/195 (3%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
Y+P + + G G R ++ S+L + RII V D ++++VAQ+L+L+A D
Sbjct: 5 YVPVVVE-QSGRGE------RSYDIYSRLLKDRIIFLSDEVNDVTSSLVVAQMLFLEAED 57
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P+KDI+ Y+NSPGGS+T+GMAIFDT+++I+ DV T+C+G+AASMGAFLL+AG KGKRY+L
Sbjct: 58 PDKDIMFYINSPGGSITSGMAIFDTMQYIKCDVCTICIGMAASMGAFLLAAGEKGKRYAL 117
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
PN+ +MIHQPLGGAQG +DI +QA +L K LN L+ TGQ LE I DT+RD FM
Sbjct: 118 PNAEVMIHQPLGGAQGQATDIQIQAERILKMKDKLNIILAERTGQNLETIKNDTERDNFM 177
Query: 271 SAEEAKDYGLIDGVV 285
SAEEAK+YGLID V+
Sbjct: 178 SAEEAKEYGLIDKVI 192
>gi|50120087|ref|YP_049254.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
atrosepticum SCRI1043]
gi|60389567|sp|Q6D827.1|CLPP_ERWCT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|49610613|emb|CAG74058.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
atrosepticum SCRI1043]
Length = 207
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 136/177 (76%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN++VAQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIYSRLLKERIIFLTGQVEDYMANLVVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRICLPNSRVMIHQPLGGFQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I++ A E+L KA +N ++ HTGQ LE I DT+RD F+SA EA +YGL+D V N
Sbjct: 149 IEIHAKEILKVKAKMNELMAKHTGQPLEAIERDTERDRFLSASEAVEYGLVDSVFTN 205
>gi|206602656|gb|EDZ39137.1| Peptidase S14, ClpP [Leptospirillum sp. Group II '5-way CG']
Length = 203
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 142/175 (81%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D +AN+++AQLL+L+A D +KDI +Y+NSPGG VTAG+
Sbjct: 15 RSYDIYSRLLKDRIIFLGTAIDDMVANLVIAQLLFLEAEDASKDINLYINSPGGVVTAGL 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+CVG AASMGA LL+AG GKR++LPN+RIMIHQPLGG QG ++
Sbjct: 75 AIYDTMQYIKPDVSTICVGQAASMGAVLLAAGADGKRFALPNARIMIHQPLGGVQGQATE 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A E+L + +LNG L+ HT Q+L K+ +DTDRD+F+SAE+AK YGL+D V+
Sbjct: 135 IEIHAREILKMREHLNGILAKHTKQSLAKVAQDTDRDYFLSAEDAKAYGLVDSVI 189
>gi|296273946|ref|YP_003656577.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arcobacter
nitrofigilis DSM 7299]
gi|296098120|gb|ADG94070.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arcobacter
nitrofigilis DSM 7299]
Length = 194
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/200 (56%), Positives = 145/200 (72%), Gaps = 8/200 (4%)
Query: 91 YIPTYAQGEQGGGPPPMLLGRFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVD 150
YIP Y + G G R ++ S+L + RII G + D +A+ IVAQLL+L+A D
Sbjct: 3 YIP-YVVEKSGRGE------RSYDIYSRLLKDRIIMLSGEINDPVASTIVAQLLFLEAED 55
Query: 151 PNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSL 210
P+KDI +Y+NSPGG +T+GM+I+DT+ +I+PDV T+C+G AASMGAFLLS+G KGKRYSL
Sbjct: 56 PDKDIYLYINSPGGVITSGMSIYDTMNYIKPDVCTICIGQAASMGAFLLSSGVKGKRYSL 115
Query: 211 PNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFM 270
PNSR+MIHQP GGAQG +DI +QA E+ K LN ++ TGQ ++ I +DTDRD FM
Sbjct: 116 PNSRVMIHQPSGGAQGQSTDIQIQAKEIQRMKDTLNKMIAEQTGQPIKVIEKDTDRDNFM 175
Query: 271 SAEEAKDYGLIDGVVMNPHK 290
SAEEA YGLID V+ N HK
Sbjct: 176 SAEEACKYGLIDEVITN-HK 194
>gi|262374981|ref|ZP_06068215.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter
lwoffii SH145]
gi|262309994|gb|EEY91123.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter
lwoffii SH145]
Length = 201
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/172 (59%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED+MAN+IVAQ+L+L+A +P+KDI +Y+NSPGGSVTAGMAI+
Sbjct: 26 DIYSRLLRERVIFMTGEVEDNMANLIVAQMLFLEAENPDKDIHLYINSPGGSVTAGMAIY 85
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDV T C+G AASMGAFLL+AGTKGKRY L N+R+MIHQPLGG +G SDI++
Sbjct: 86 DTMQFIKPDVVTYCMGQAASMGAFLLNAGTKGKRYCLENARVMIHQPLGGFRGQASDIEI 145
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K LN ++ H+GQ EK+ DTDRD FM+A++AK+YGL+D V+
Sbjct: 146 HAREILFIKERLNRLMAEHSGQDYEKVARDTDRDNFMTAQQAKEYGLVDEVL 197
>gi|452076962|gb|AGF92935.1| ATP-dependent Clp protease proteolytic subunit ClpP [uncultured
organism]
Length = 205
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ GPV D+++N+I+AQ+LYL+A +P++DI +Y+N+ GG VT G+
Sbjct: 20 RTYDIYSRLLKDRIVFLKGPVTDELSNVIIAQMLYLEAENPSQDINLYINTQGGVVTGGL 79
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++++P+V T+CVG A+SMGA LL+ G GKRY+LPNSRI+IHQPLGGAQG +D
Sbjct: 80 AIYDTMQYVKPEVKTICVGQASSMGALLLATGEPGKRYALPNSRILIHQPLGGAQGQATD 139
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
+++ ANE++ K +N L+ HTGQ L+KI EDT+RDFFM+ EEA+DYG+ID V+
Sbjct: 140 VEIHANELVKVKKRVNNILADHTGQPLDKIQEDTERDFFMAPEEAEDYGIIDEVI 194
>gi|120610146|ref|YP_969824.1| ATP-dependent Clp protease proteolytic subunit [Acidovorax citrulli
AAC00-1]
gi|326316315|ref|YP_004233987.1| ATP-dependent Clp protease proteolytic subunit [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|166201794|sp|A1TM62.1|CLPP_ACIAC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|120588610|gb|ABM32050.1| ATP-dependent Clp protease proteolytic subunit ClpP [Acidovorax
citrulli AAC00-1]
gi|323373151|gb|ADX45420.1| ATP-dependent Clp protease proteolytic subunit [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 202
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G V D AN++VAQLL+L++ +P+KDI Y+NSPGGSVTAGM
Sbjct: 24 RSYDIYSRLLKERIVFLIGEVNDQTANLVVAQLLFLESENPDKDISFYINSPGGSVTAGM 83
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C+G AASMGAFLL+AG KGKR+SLPNS+IMIHQ LGGA+G +D
Sbjct: 84 AIYDTMQFIKPDVSTMCLGFAASMGAFLLAAGAKGKRFSLPNSKIMIHQVLGGARGQATD 143
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A ++L K +N L+ TGQ LEK+ DT+RD+F++A+EAK+YGL+D VV
Sbjct: 144 IEIHARDILRTKDQMNRILAERTGQPLEKVKADTERDYFLTADEAKEYGLVDQVV 198
>gi|57237197|ref|YP_178209.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni RM1221]
gi|86149593|ref|ZP_01067823.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni CF93-6]
gi|86151504|ref|ZP_01069719.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 260.94]
gi|86153638|ref|ZP_01071841.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni HB93-13]
gi|88597431|ref|ZP_01100666.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 84-25]
gi|148926357|ref|ZP_01810041.1| ATP-dependent clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni CG8486]
gi|153951283|ref|YP_001397440.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. doylei 269.97]
gi|157414501|ref|YP_001481757.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 81116]
gi|205356561|ref|ZP_03223324.1| ATP-dependent CLp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni CG8421]
gi|218561871|ref|YP_002343650.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni NCTC 11168 = ATCC 700819]
gi|315123791|ref|YP_004065795.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni ICDCCJ07001]
gi|317510277|ref|ZP_07967722.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 305]
gi|384440860|ref|YP_005657163.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni M1]
gi|384442542|ref|YP_005658794.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni S3]
gi|384447501|ref|YP_005655552.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni IA3902]
gi|403054994|ref|YP_006632399.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni NCTC 11168-BN148]
gi|407941656|ref|YP_006857296.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni PT14]
gi|415730267|ref|ZP_11472938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni DFVF1099]
gi|415745982|ref|ZP_11475227.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 327]
gi|419563790|ref|ZP_14101183.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1098]
gi|419568884|ref|ZP_14106012.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1417]
gi|419569464|ref|ZP_14106524.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
7--1]
gi|419572536|ref|ZP_14109446.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
132-6]
gi|419575578|ref|ZP_14112264.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1909]
gi|419577012|ref|ZP_14113576.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
59-2]
gi|419579930|ref|ZP_14116318.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1948]
gi|419580982|ref|ZP_14117296.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1957]
gi|419583282|ref|ZP_14119466.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1961]
gi|419591402|ref|ZP_14126754.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
37/05]
gi|419606137|ref|ZP_14140517.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 9860]
gi|419619337|ref|ZP_14152807.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 51494]
gi|419621796|ref|ZP_14155044.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23216]
gi|419623700|ref|ZP_14156824.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23218]
gi|419626351|ref|ZP_14159342.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23223]
gi|419626939|ref|ZP_14159856.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23263]
gi|419629936|ref|ZP_14162647.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 60004]
gi|419630868|ref|ZP_14163469.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23264]
gi|419633160|ref|ZP_14165601.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23269]
gi|419635248|ref|ZP_14167562.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 55037]
gi|419636579|ref|ZP_14168772.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 9879]
gi|419638601|ref|ZP_14170659.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 86605]
gi|419642138|ref|ZP_14173946.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni ATCC 33560]
gi|419644077|ref|ZP_14175666.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 9081]
gi|419646616|ref|ZP_14178078.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 53161]
gi|419650750|ref|ZP_14181960.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 2008-1025]
gi|419655723|ref|ZP_14186565.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 2008-988]
gi|419657396|ref|ZP_14188052.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1997-1]
gi|419658905|ref|ZP_14189452.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 2008-979]
gi|419661493|ref|ZP_14191818.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 2008-831]
gi|419663222|ref|ZP_14193423.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1997-4]
gi|419667352|ref|ZP_14197328.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1997-10]
gi|419668949|ref|ZP_14198749.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1997-11]
gi|419671720|ref|ZP_14201363.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1997-14]
gi|419673423|ref|ZP_14202890.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 51037]
gi|419674808|ref|ZP_14204092.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 110-21]
gi|419676717|ref|ZP_14205883.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 87330]
gi|419678176|ref|ZP_14207241.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 87459]
gi|419683631|ref|ZP_14212318.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1213]
gi|419684581|ref|ZP_14213174.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1577]
gi|419688663|ref|ZP_14216983.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1854]
gi|419690688|ref|ZP_14218883.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1893]
gi|419691911|ref|ZP_14220017.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1928]
gi|419694287|ref|ZP_14222256.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 9872]
gi|419695810|ref|ZP_14223691.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23210]
gi|419697690|ref|ZP_14225419.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23211]
gi|424845752|ref|ZP_18270355.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni NW]
gi|424848862|ref|ZP_18273336.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni D2600]
gi|9297087|sp|P54413.2|CLPP_CAMJE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460171|sp|Q5HWX6.1|CLPP_CAMJR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201811|sp|A7H1R0.1|CLPP_CAMJD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|172047014|sp|A8FJZ3.1|CLPP_CAMJ8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|57166001|gb|AAW34780.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni RM1221]
gi|85839861|gb|EAQ57120.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni CF93-6]
gi|85841851|gb|EAQ59098.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 260.94]
gi|85842599|gb|EAQ59811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni HB93-13]
gi|88190492|gb|EAQ94466.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 84-25]
gi|112359577|emb|CAL34361.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni NCTC 11168 = ATCC 700819]
gi|145844749|gb|EDK21854.1| ATP-dependent clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni CG8486]
gi|152938729|gb|ABS43470.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. doylei 269.97]
gi|157385465|gb|ABV51780.1| ATP-dependent clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 81116]
gi|205345566|gb|EDZ32206.1| ATP-dependent CLp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni CG8421]
gi|284925484|gb|ADC27836.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni IA3902]
gi|307747143|gb|ADN90413.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni M1]
gi|315017513|gb|ADT65606.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni ICDCCJ07001]
gi|315057629|gb|ADT71958.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni S3]
gi|315928124|gb|EFV07442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni DFVF1099]
gi|315930200|gb|EFV09315.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 305]
gi|315931999|gb|EFV10952.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 327]
gi|356486652|gb|EHI16634.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni NW]
gi|356487884|gb|EHI17823.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni D2600]
gi|380543470|gb|EIA67664.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1098]
gi|380544729|gb|EIA68740.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1417]
gi|380549100|gb|EIA72979.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
7--1]
gi|380550716|gb|EIA74355.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
132-6]
gi|380553342|gb|EIA76863.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1909]
gi|380555831|gb|EIA79117.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1948]
gi|380558340|gb|EIA81520.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
59-2]
gi|380560066|gb|EIA83172.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1957]
gi|380563488|gb|EIA86324.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
1961]
gi|380568463|gb|EIA90933.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
37/05]
gi|380587341|gb|EIB08547.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
LMG 9860]
gi|380600394|gb|EIB20732.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23218]
gi|380601202|gb|EIB21520.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23216]
gi|380602790|gb|EIB23032.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 51494]
gi|380603405|gb|EIB23506.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23223]
gi|380606751|gb|EIB26644.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 60004]
gi|380607631|gb|EIB27487.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23263]
gi|380612096|gb|EIB31633.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23264]
gi|380612873|gb|EIB32388.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23269]
gi|380613199|gb|EIB32695.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 55037]
gi|380617177|gb|EIB36356.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 9879]
gi|380618442|gb|EIB37572.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 86605]
gi|380622727|gb|EIB41467.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 9081]
gi|380623217|gb|EIB41932.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 53161]
gi|380625258|gb|EIB43855.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni ATCC 33560]
gi|380628053|gb|EIB46393.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 2008-1025]
gi|380634880|gb|EIB52724.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1997-1]
gi|380636568|gb|EIB54261.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 2008-988]
gi|380639981|gb|EIB57447.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 2008-831]
gi|380640814|gb|EIB58255.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 2008-979]
gi|380643402|gb|EIB60631.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1997-4]
gi|380646201|gb|EIB63182.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1997-10]
gi|380648124|gb|EIB64996.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1997-11]
gi|380648985|gb|EIB65769.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1997-14]
gi|380652690|gb|EIB69159.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 110-21]
gi|380653659|gb|EIB70063.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 51037]
gi|380655800|gb|EIB72099.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 87330]
gi|380658172|gb|EIB74204.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1213]
gi|380661270|gb|EIB77176.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 87459]
gi|380665179|gb|EIB80757.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1854]
gi|380666847|gb|EIB82354.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1577]
gi|380668350|gb|EIB83708.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1893]
gi|380671074|gb|EIB86309.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 9872]
gi|380671279|gb|EIB86501.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 1928]
gi|380676613|gb|EIB91493.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23210]
gi|380677344|gb|EIB92213.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni LMG 23211]
gi|401780646|emb|CCK66338.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni NCTC 11168-BN148]
gi|407905494|gb|AFU42323.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni PT14]
Length = 194
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/180 (57%), Positives = 139/180 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G + D++A IVAQLL+L+A DP KDI +Y+NSPGG +T+G
Sbjct: 15 RSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLYINSPGGVITSGF 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ +I+PDV T+C+G AASMGAFLLS G +GKR++LPNSRIMIHQPLGGA+G +D
Sbjct: 75 SIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRFALPNSRIMIHQPLGGARGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L K LN L+ +T Q + KI +DT+RDFFMSA+EAK+YGLID V+ K
Sbjct: 135 IEIQAKEILRLKTILNDILAKNTKQKVAKIAKDTERDFFMSAQEAKEYGLIDKVLEKSFK 194
>gi|397643686|gb|EJK76020.1| hypothetical protein THAOC_02238 [Thalassiosira oceanica]
Length = 221
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/172 (62%), Positives = 135/172 (78%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
+V+S+L + RI+ G V D+MAN++VAQLLYL DP KDI +Y+NSPGGSV+AG+AI+
Sbjct: 33 DVVSRLLKDRILLLGTDVNDEMANVLVAQLLYLANEDPEKDITIYINSPGGSVSAGLAIY 92
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I DV TVC G+AASMGAFLL AG GKR SLPN+RIMIHQPLGGAQG +DI++
Sbjct: 93 DTMQFIPCDVQTVCFGMAASMGAFLLGAGAPGKRKSLPNARIMIHQPLGGAQGQAADIEI 152
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
QA E+L KA LN Y++ + Q +EKI EDTDRDFFM+ EA DYG+ID V+
Sbjct: 153 QAKEILFVKACLNKYIAQYCDQPVEKIEEDTDRDFFMTPTEAMDYGIIDEVI 204
>gi|348618146|ref|ZP_08884677.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Candidatus Glomeribacter gigasporarum BEG34]
gi|347816517|emb|CCD29366.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Candidatus Glomeribacter gigasporarum BEG34]
Length = 222
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 149/199 (74%), Gaps = 6/199 (3%)
Query: 93 PTYAQGEQGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYL 146
P A Q G PM++ R ++ S+L + R++ G V + AN+IVAQLL+L
Sbjct: 20 PQSAVDAQALGLVPMVVETSGRGERAYDIYSRLLKERVVFLIGEVNEHNANLIVAQLLFL 79
Query: 147 DAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGK 206
++ +P+KDI +Y+NSPGGSV AGMAI+DT++ I+P VST+C+GLAASMGAFLL+AG K
Sbjct: 80 ESENPDKDISLYINSPGGSVCAGMAIYDTLQFIKPQVSTLCMGLAASMGAFLLAAGAPEK 139
Query: 207 RYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDR 266
R++LPN+RIMIHQPLGGA+G SDI++ A E+L+ K LN L+ HTGQT+E+I+ DTDR
Sbjct: 140 RFALPNARIMIHQPLGGARGQASDIEIHAREILYLKERLNQLLAQHTGQTVERISSDTDR 199
Query: 267 DFFMSAEEAKDYGLIDGVV 285
D FMSAE+AK YGLID ++
Sbjct: 200 DKFMSAEDAKAYGLIDQIL 218
>gi|310820094|ref|YP_003952452.1| ATP-dependent CLP protease proteolytic subunit 1 [Stigmatella
aurantiaca DW4/3-1]
gi|309393166|gb|ADO70625.1| ATP-dependent Clp protease proteolytic subunit 1 [Stigmatella
aurantiaca DW4/3-1]
Length = 207
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/187 (56%), Positives = 146/187 (78%), Gaps = 4/187 (2%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G ++DD++N IV+QLL+L++ DP+KDI +Y+NSPGGSVTAG+
Sbjct: 18 RSYDIYSRLLKDRIVMLGTEIDDDVSNAIVSQLLFLESEDPDKDINLYINSPGGSVTAGL 77
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++++ VST+C+G AASMGA LL AG KGKRYSLP+SRIMIHQPLGG +G +D
Sbjct: 78 AIYDTMQYVKCPVSTICIGQAASMGAVLLLAGAKGKRYSLPSSRIMIHQPLGGVRGQATD 137
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L +A LN + HTGQ LE++ +DTDRD++M A E+K YG+ID + NP K
Sbjct: 138 IEIQAKEILRMRAKLNDLIVKHTGQPLERVEKDTDRDYYMGATESKAYGIIDE-IQNPRK 196
Query: 291 ILQPVAA 297
PVAA
Sbjct: 197 ---PVAA 200
>gi|91775762|ref|YP_545518.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Methylobacillus flagellatus KT]
gi|116243149|sp|Q1H1G0.1|CLPP_METFK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|91709749|gb|ABE49677.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Methylobacillus flagellatus KT]
Length = 213
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/202 (55%), Positives = 147/202 (72%), Gaps = 9/202 (4%)
Query: 93 PTYAQGE---QGGGPPPMLLG------RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQL 143
P AQ + QG G PM++ R ++ S+L + RII GPV D AN++VAQL
Sbjct: 5 PATAQSQFEAQGLGYIPMVIEQSGRGERSYDIYSRLLKERIIFLVGPVNDATANLVVAQL 64
Query: 144 LYLDAVDPNKDIIMYLNSPGGSVTAGMAIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGT 203
L+L+A +P+KDI Y+NSPGGSVTAGM I+DT++ ++PDVST+CVG AASMGA LL+AG
Sbjct: 65 LFLEAENPDKDIYFYINSPGGSVTAGMGIYDTMQFVKPDVSTLCVGQAASMGALLLAAGA 124
Query: 204 KGKRYSLPNSRIMIHQPLGGAQGGQSDIDLQANEMLHHKANLNGYLSYHTGQTLEKINED 263
+GKR+ LPNSR+MIHQPLGG QG SDI++ A E+L + LN L+ HTGQ +EKI D
Sbjct: 125 QGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFLREKLNHILASHTGQPVEKIALD 184
Query: 264 TDRDFFMSAEEAKDYGLIDGVV 285
TDRD FMSAE++ YG++D V+
Sbjct: 185 TDRDNFMSAEQSVAYGIVDKVI 206
>gi|31340017|sp|Q8DG26.2|CLPP_VIBVU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|60389705|sp|Q7MMG7.2|CLPP_VIBVY RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 200
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 136/175 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN++VAQLL+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 21 RSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGM 80
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+P+VSTVC+G A SMGAFLL+ G GKRY LPNSR+MIHQPLGG QG SD
Sbjct: 81 SIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASD 140
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ HTGQ LE I DTDRD FMSA++A +YGL+D V+
Sbjct: 141 IQIHAQEILTIKTKLNKLLAEHTGQPLEVIERDTDRDNFMSADQAVEYGLVDAVL 195
>gi|345858360|ref|ZP_08810754.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus sp. OT]
gi|344328554|gb|EGW39938.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfosporosinus sp. OT]
Length = 205
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 144/178 (80%), Gaps = 3/178 (1%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GG ++DD++N++VAQ+L+L+A DP KDI +Y+NSPGGS+TAGM
Sbjct: 17 RSYDIYSRLLKDRIIFLGGAIDDDVSNLVVAQMLFLEAEDPEKDINLYINSPGGSITAGM 76
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQG--GQ 228
AI+DT+++IR DV T+C+G+AASMGAFLL+AG KGKR +LPNS ++IHQPL G G GQ
Sbjct: 77 AIYDTMQYIRSDVRTICIGMAASMGAFLLTAGAKGKRVALPNSEVLIHQPLIGGHGLSGQ 136
Query: 229 -SDIDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
++I++ A ++L KA +N LS TGQ LEKI +DT+RD++M+AEEAK+YGL+D ++
Sbjct: 137 ATEIEIHAKQLLRTKAKMNKILSERTGQPLEKIEKDTERDYYMTAEEAKEYGLVDQIL 194
>gi|315645729|ref|ZP_07898853.1| hypothetical protein PVOR_09635 [Paenibacillus vortex V453]
gi|315279207|gb|EFU42517.1| hypothetical protein PVOR_09635 [Paenibacillus vortex V453]
Length = 196
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 136/180 (75%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII ++DD+AN+++AQLL+L A DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKDRIIFLSSAIDDDVANLVIAQLLFLAAEDPEKDISLYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
I+DT++ I+PDVST+CVG+AASMG+ LL+AG GKRY+L NS +MIHQPLGG QG SD
Sbjct: 76 GIYDTMQLIKPDVSTICVGMAASMGSLLLTAGAPGKRYALENSEVMIHQPLGGIQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I + A+ ++ + LN TGQ LEKI DTDRDFFMSAEEAK YG+ID V+ +P K
Sbjct: 136 IQIHADWIIKTRHKLNQIYVERTGQPLEKIERDTDRDFFMSAEEAKAYGIIDDVLSSPTK 195
>gi|304413826|ref|ZP_07395243.1| ATP-dependent serine protease [Candidatus Regiella insecticola
LSR1]
gi|304283546|gb|EFL91941.1| ATP-dependent serine protease [Candidatus Regiella insecticola
LSR1]
Length = 261
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 141/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN+IVAQ+L+L+A +P+KDI +Y+NSPGG +TAGM
Sbjct: 65 RAYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPDKDISLYINSPGGVITAGM 124
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDV T+C+G A SMGAFLL+AGTKGKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 125 SIYDTMQFIKPDVITLCIGQACSMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQGQVSD 184
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ + E+ + K +N ++ HTG+ LE+I +DT+RD+F+SAEE+ +YGL+D V+
Sbjct: 185 IEIHSKEIRNVKNRMNTLMAKHTGKALEEIEKDTERDYFLSAEESVNYGLVDQVL 239
>gi|60389653|sp|Q6LNW0.2|CLPP_PHOPR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 199
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VED MAN++VAQLL+L++ +P+KDI +Y+NSPGGSVTAGM
Sbjct: 21 RSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGM 80
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+P+VSTVC+G A SMGAFLL+ G KGKRY LPNSR+MIHQPLGG QG SD
Sbjct: 81 SIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRVMIHQPLGGFQGQASD 140
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ HTGQ LE + DTDRD FMSA++A +YGL+D V+
Sbjct: 141 IQIHAKEILTIKHRLNSLLAKHTGQPLEVVEGDTDRDNFMSADQAVEYGLVDSVL 195
>gi|297182365|gb|ADI18531.1| protease subunit of ATP-dependent clp proteases [uncultured SAR406
cluster bacterium HF4000_22B16]
Length = 202
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G P++D ++++I+AQ L+L+A DP+KDI +Y+NSPGG +TAGM
Sbjct: 24 RAYDIYSRLLKERIVFLGTPIDDSISSLIIAQFLFLEAEDPDKDIYLYINSPGGYITAGM 83
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AIFDT+ +I+PDV+T+C+G A+SMGAFLL+ G KGKR +LPNSRIMIHQP+GGA+G SD
Sbjct: 84 AIFDTMNYIKPDVATICMGQASSMGAFLLAGGKKGKRSALPNSRIMIHQPMGGAEGQASD 143
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I +QA+E++ + LN L+ TGQ + K+ +D+DR++FMSA EAK YG+ID V+
Sbjct: 144 IKIQADEIIRLRGKLNKLLAKQTGQKISKVEKDSDRNYFMSAVEAKKYGIIDTVL 198
>gi|77455725|gb|ABA86601.1| chloroplast clp protease P [Isochrysis galbana]
Length = 277
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/178 (60%), Positives = 142/178 (79%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
+V+S+L + RI+ G V+D++AN++VAQLLYL D KDI MY+NSPGGSV+AGMAIF
Sbjct: 89 DVMSRLLKDRILLLGQGVDDEVANLLVAQLLYLANEDARKDITMYINSPGGSVSAGMAIF 148
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++++ D++TVC G AASMGAFLL AG KGKR SLPNSRIMIHQPLGGAQG +DI++
Sbjct: 149 DTMQYVPCDLNTVCFGTAASMGAFLLGAGQKGKRRSLPNSRIMIHQPLGGAQGQAADIEI 208
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHKI 291
QA E+L +A L Y++ +TGQ ++KI +D DRDFFM+ EEAKDYG+ID V+ + +I
Sbjct: 209 QAKEILFIRALLCEYIADYTGQPVDKIEDDCDRDFFMTPEEAKDYGIIDEVLASKVRI 266
>gi|332160749|ref|YP_004297326.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|386309498|ref|YP_006005554.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. palearctica Y11]
gi|418242377|ref|ZP_12868889.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|433550574|ref|ZP_20506618.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica IP 10393]
gi|318604628|emb|CBY26126.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325664979|gb|ADZ41623.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330859950|emb|CBX70279.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica W22703]
gi|351778211|gb|EHB20378.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|431789709|emb|CCO69658.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica IP 10393]
Length = 207
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 137/174 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G VED MAN+I AQ+L+L+A +P KDI +Y+NSPGG +TAGM
Sbjct: 29 RSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGM 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT++ I+PDVST+C+G A SMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG +D
Sbjct: 89 SIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGV 284
I++ A E+L K+ +N ++ HTG++LE+I DT+RD F+SA+EA YGL+D V
Sbjct: 149 IEIHAKEILKVKSRMNELMAKHTGKSLEEIERDTERDRFLSADEAVKYGLVDSV 202
>gi|218779308|ref|YP_002430626.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfatibacillum alkenivorans AK-01]
gi|259585946|sp|B8FA62.1|CLPP_DESAA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|218760692|gb|ACL03158.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfatibacillum alkenivorans AK-01]
Length = 201
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 139/177 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G V D +AN I+AQLL+L++ DP KDI Y+NSPGGSVTAGM
Sbjct: 16 RTYDIYSRLLKDRIIFLGTEVNDVVANSIIAQLLFLESDDPEKDINFYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ +I+P+++TVC+G AASMGA LL+AG GKRYSLPN+RI+IHQP+GG QG SD
Sbjct: 76 AIYDTMAYIKPEITTVCIGQAASMGAVLLAAGNHGKRYSLPNARILIHQPMGGFQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMN 287
I +QA E+L K LN L+ HTG+ L+++ +DTDRD+FMS EAK+YGLID V++N
Sbjct: 136 IAIQAQEILRMKEALNEILASHTGKPLKQVQQDTDRDYFMSPLEAKEYGLIDHVILN 192
>gi|220906939|ref|YP_002482250.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. PCC
7425]
gi|219863550|gb|ACL43889.1| Endopeptidase Clp [Cyanothece sp. PCC 7425]
Length = 198
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/172 (60%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ ++L++ RII G V+D++AN IVA +LYLD+ DP KDI++Y+NSPGGSVTAGMAI+
Sbjct: 22 DIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPGKDIVLYINSPGGSVTAGMAIY 81
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++HI+ DV T+CVGLAASMG+FLL+AG GKR +LP+SRIMIHQP GG +G SDI++
Sbjct: 82 DTMQHIKSDVVTICVGLAASMGSFLLTAGAPGKRLALPHSRIMIHQPSGGTRGQASDIEI 141
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
+A E++ + LN + TGQ LEKI +D DRD+FMSA+EAKDYGLID V+
Sbjct: 142 EAREIIRIRHQLNQIYADRTGQPLEKIEKDIDRDYFMSAQEAKDYGLIDRVI 193
>gi|415886844|ref|ZP_11548587.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
methanolicus MGA3]
gi|387585495|gb|EIJ77820.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
methanolicus MGA3]
Length = 201
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G P++D +AN IVAQLL+L+A +P KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIMLGTPIDDYVANSIVAQLLFLEAENPEKDISIYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDV T+C+G+AASMGAFLL+AGTKGKRY+LPNS +MIHQPLGGAQG ++
Sbjct: 76 AIYDTMQFIKPDVQTICIGMAASMGAFLLAAGTKGKRYALPNSEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +L + LN LS TGQ +E I +DTDRD FM+A++A +YGL+D ++
Sbjct: 136 IEIAAKRILFLRDKLNQILSERTGQPVEVIAKDTDRDNFMTAQQALEYGLVDHII 190
>gi|374319921|ref|YP_005073050.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
terrae HPL-003]
gi|357198930|gb|AET56827.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
terrae HPL-003]
Length = 196
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 136/178 (76%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GP++DD+AN+++AQLL+L A DP KDI +Y+NSPGGSVTAGM
Sbjct: 16 RSYDIYSRLLKDRIIFLSGPIDDDVANLVIAQLLFLSAEDPEKDINLYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
I+DT++ I+PDVST+CVG+AASMG+ LL+AG GKRY+L NS +MIHQPLGG QG SD
Sbjct: 76 GIYDTMQFIKPDVSTICVGMAASMGSLLLTAGALGKRYALTNSEVMIHQPLGGIQGQASD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
+ + A+ ++ +A LN TGQ LEKI DTDRDFFM A+EAK YG+ID V+ P
Sbjct: 136 MLIHADWIIKTRAKLNQIYVERTGQPLEKIERDTDRDFFMEADEAKAYGIIDQVLSRP 193
>gi|358012229|ref|ZP_09144039.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter sp.
P8-3-8]
Length = 203
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 139/172 (80%)
Query: 114 NVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGMAIF 173
++ S+L + R+I G VED+MAN+IVAQ+L+L+A +P+KDI +Y+NSPGGSVTAGMAI+
Sbjct: 26 DIFSRLLRERVIFLTGEVEDNMANLIVAQMLFLEAENPDKDIHLYINSPGGSVTAGMAIY 85
Query: 174 DTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDL 233
DT++ I+PDV T C+G AASMGAFLL+AG KGKRY L N+R+MIHQPLGG +G SDI++
Sbjct: 86 DTMQFIKPDVVTYCMGQAASMGAFLLNAGAKGKRYCLENARVMIHQPLGGFRGQASDIEI 145
Query: 234 QANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
A E+L K LN ++ H+GQ E++ +DTDRD FM+AE+AK+YGL+D V+
Sbjct: 146 HAREILFIKERLNRLMAEHSGQDYERVAKDTDRDNFMTAEQAKEYGLVDQVL 197
>gi|340358028|ref|ZP_08680626.1| ATP-dependent Clp protease, protease subunit [Sporosarcina
newyorkensis 2681]
gi|339615567|gb|EGQ20241.1| ATP-dependent Clp protease, protease subunit [Sporosarcina
newyorkensis 2681]
Length = 197
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 139/175 (79%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IVAQLL+L+A DP KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIMLGSGIDDNVANSIVAQLLFLEAEDPEKDISIYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PD+ T+CVG+AASMGAFLL+AGT GKRY+LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTMQFIKPDIQTICVGMAASMGAFLLTAGTPGKRYALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +L + LN L+ TGQ +E I +DTDRD FM+AE AK+YGLID +V
Sbjct: 136 IEIAAKRILDLREKLNQILADRTGQPIEVIAQDTDRDNFMTAERAKEYGLIDHIV 190
>gi|404369989|ref|ZP_10975316.1| ATP-dependent Clp protease proteolytic subunit [Clostridium sp.
7_2_43FAA]
gi|226913880|gb|EEH99081.1| ATP-dependent Clp protease proteolytic subunit [Clostridium sp.
7_2_43FAA]
Length = 198
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 139/180 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G + D +N++V+QLL+L++ DP+KDI +Y+NSPGGS+TAGM
Sbjct: 16 RSYDIFSRLLKDRIIMLSGEINDTTSNLVVSQLLFLESEDPDKDIHLYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+++I+PDVST+C+G+AASMG+FLLS+G KGKR+ LPNS IMIHQPLGG QG +D
Sbjct: 76 AIYDTMQYIKPDVSTICIGMAASMGSFLLSSGAKGKRFVLPNSEIMIHQPLGGFQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
D+ A ++ K +LN LS +T Q LEKI D +RD+FM+AEEA +YGL+D V+ K
Sbjct: 136 FDIHARRIIKIKESLNRILSENTNQPLEKIKTDVERDYFMTAEEAMNYGLVDKVITKNDK 195
>gi|410618478|ref|ZP_11329423.1| ATP-dependent Clp protease, protease subunit [Glaciecola polaris
LMG 21857]
gi|410162020|dbj|GAC33561.1| ATP-dependent Clp protease, protease subunit [Glaciecola polaris
LMG 21857]
Length = 212
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 135/175 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + +I G VED MAN+IVAQ+L+L+A +P KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKENVIFMVGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT+ I+PDVSTVC+G AASMGAFLLS G KGKRY LPN+R+MIHQPLGG QG SD
Sbjct: 85 AIYDTMNFIKPDVSTVCIGQAASMGAFLLSGGAKGKRYCLPNARVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
++ A E+L K +N ++ HTGQ +K+ DTDRD F+SA+E+ DYGL+D V+
Sbjct: 145 FEIHAREILSIKEKMNRLMAAHTGQDYDKVARDTDRDNFLSAQESVDYGLVDQVL 199
>gi|315639062|ref|ZP_07894230.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
upsaliensis JV21]
gi|315480838|gb|EFU71474.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
upsaliensis JV21]
Length = 194
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/180 (57%), Positives = 138/180 (76%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RI+ G + DD+A+ IVAQLL+L+A DP KDI +Y+NSPGG +T+G
Sbjct: 15 RSYDIYSRLLKDRIVMLSGEINDDVASSIVAQLLFLEAEDPQKDIYLYINSPGGVITSGF 74
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+ +I+PDV T+C+G AASMGAFLLS G K KR++LPNSRIMIHQPLGGA+G +D
Sbjct: 75 SIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAKQKRFALPNSRIMIHQPLGGARGQATD 134
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNPHK 290
I++QA E+L K LN L+ +T Q + KI +DT+RDFFMSA EAK+YGLID V+ K
Sbjct: 135 IEIQAKEILRLKTILNEILAQNTNQKIAKITKDTERDFFMSAVEAKEYGLIDKVLEKSFK 194
>gi|423018592|ref|ZP_17009313.1| ATP-dependent Clp protease proteolytic subunit [Achromobacter
xylosoxidans AXX-A]
gi|338778354|gb|EGP42829.1| ATP-dependent Clp protease proteolytic subunit [Achromobacter
xylosoxidans AXX-A]
Length = 217
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPV D AN++VAQLL+L++ +P+KDI +Y+NSPGGSV AGM
Sbjct: 37 RAYDIYSRLLRERLIFLVGPVNDATANLVVAQLLFLESENPDKDISLYINSPGGSVYAGM 96
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDVST+C GLAASMGAFLL+AG KGKR++LPNSRIMIHQP GGAQG SD
Sbjct: 97 AIYDTMQFIKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRIMIHQPSGGAQGQASD 156
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I +QA E+L + LN L+ +TGQ++E+I DT+RD FMSAE+A YGL+D V+
Sbjct: 157 IQIQAREILDLRERLNRILADNTGQSIERIALDTERDNFMSAEDAVSYGLVDKVM 211
>gi|222150769|ref|YP_002559922.1| ATP-dependent Clp protease proteolytic subunit [Macrococcus
caseolyticus JCSC5402]
gi|254763793|sp|B9EAG5.1|CLPP_MACCJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|222119891|dbj|BAH17226.1| ATP-dependent protease proteolytic subunit ClpP [Macrococcus
caseolyticus JCSC5402]
Length = 194
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 141/178 (79%), Gaps = 1/178 (0%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L A D KDI +Y+NSPGGSVTAGM
Sbjct: 16 RAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++HI+PDV T+C+G+AASMG+FLL+AG KGKR++LPN+ +MIHQPLGGAQG ++
Sbjct: 76 AIYDTMQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVVMNP 288
I++ A +L + LN L+ TGQ +EKI +DTDRD F++A+EAK YGLID VM+P
Sbjct: 136 IEIAARHILKTREKLNRILAERTGQPIEKIEKDTDRDNFLTADEAKAYGLIDE-VMHP 192
>gi|121997404|ref|YP_001002191.1| ATP-dependent Clp protease proteolytic subunit [Halorhodospira
halophila SL1]
gi|226706517|sp|A1WUM7.1|CLPP_HALHL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|121588809|gb|ABM61389.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halorhodospira
halophila SL1]
Length = 210
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 140/175 (80%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I GPVED AN++VAQLL+L++ +P+KD+ +Y+NSPGGSVTAG+
Sbjct: 29 RAYDIFSRLLKERVIFLVGPVEDYQANLLVAQLLFLESENPDKDVHLYINSPGGSVTAGL 88
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+PDV+T+CVG AASMGA LL+AG +GKR++LPNSR+MIHQPLGG QG +D
Sbjct: 89 AIYDTMQFIKPDVATLCVGQAASMGALLLAAGAEGKRHALPNSRMMIHQPLGGFQGQATD 148
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
ID+ A E+L + LN L++HTGQ +E I +DTDRD FM+AE A YGLID V+
Sbjct: 149 IDIHAREILSMRDRLNTILAHHTGQDIETIRQDTDRDNFMAAEAAAQYGLIDRVL 203
>gi|127513436|ref|YP_001094633.1| ATP-dependent Clp protease proteolytic subunit [Shewanella loihica
PV-4]
gi|171855248|sp|A3QFX6.1|CLPP_SHELP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|126638731|gb|ABO24374.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
loihica PV-4]
Length = 203
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 136/175 (77%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + R+I G VE+ MAN+IVAQLL+L++ P+KDI +Y+NSPGGSVTAGM
Sbjct: 25 RSYDIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESESPDKDIYLYINSPGGSVTAGM 84
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+P+VSTVC+G AASMGAFLL+ G KGKR+ LPNSR+MIHQPLGG QG SD
Sbjct: 85 AIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAKGKRHCLPNSRVMIHQPLGGFQGQASD 144
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I + A E+L K LN L+ HTGQ LE I DTDRD FMSA EA +YGL+D V+
Sbjct: 145 IAIHAQEILGIKNKLNQMLADHTGQPLEVIERDTDRDNFMSATEAAEYGLVDSVL 199
>gi|402497009|ref|YP_006556269.1| protease subunit of ATP-dependent Clp protease [Wolbachia
endosymbiont of Onchocerca ochengi]
gi|398650282|emb|CCF78452.1| protease subunit of ATP-dependent Clp protease [Wolbachia
endosymbiont of Onchocerca ochengi]
Length = 199
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 138/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII GP+ED MA++IVAQLL+L++ +P+KDI MY+NSPGG VTAG+
Sbjct: 16 RAYDIYSRLVKERIIFVTGPIEDSMASVIVAQLLFLESENPDKDIYMYINSPGGIVTAGL 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
+I+DT+++I+PDVST+C+G AASMG+ LL+AGTKGKRYSLP+SRIMIHQP GG QG +D
Sbjct: 76 SIYDTMQYIKPDVSTLCIGQAASMGSLLLAAGTKGKRYSLPHSRIMIHQPSGGYQGQATD 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ ANE+L K LN HTG +L+KI E +RD FM +EEAK GL+D V+
Sbjct: 136 IEIHANEILRVKKKLNQIYEKHTGNSLKKIEEMMERDKFMDSEEAKKIGLVDKVM 190
>gi|311069969|ref|YP_003974892.1| ATP-dependent Clp protease proteolytic subunit [Bacillus atrophaeus
1942]
gi|398308397|ref|ZP_10511871.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mojavensis
RO-H-1]
gi|419821657|ref|ZP_14345250.1| ATP-dependent Clp protease proteolytic subunit [Bacillus atrophaeus
C89]
gi|310870486|gb|ADP33961.1| ATP-dependent Clp protease proteolytic subunit [Bacillus atrophaeus
1942]
gi|388474293|gb|EIM11023.1| ATP-dependent Clp protease proteolytic subunit [Bacillus atrophaeus
C89]
Length = 198
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 137/175 (78%)
Query: 111 RFQNVLSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAVDPNKDIIMYLNSPGGSVTAGM 170
R ++ S+L + RII G ++D++AN IV+QLL+L+A DP KDI +Y+NSPGGS+TAGM
Sbjct: 16 RAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGM 75
Query: 171 AIFDTIRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSD 230
AI+DT++ I+P VST+C+G+AASMGAFLL+AG KGKRY+LPNS +MIHQPLGGAQG ++
Sbjct: 76 AIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATE 135
Query: 231 IDLQANEMLHHKANLNGYLSYHTGQTLEKINEDTDRDFFMSAEEAKDYGLIDGVV 285
I++ A +L + LN L+ TGQ LE I DTDRD F SAEEA +YGLID V+
Sbjct: 136 IEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEAMEYGLIDKVL 190
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,925,765,858
Number of Sequences: 23463169
Number of extensions: 214017727
Number of successful extensions: 454023
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6300
Number of HSP's successfully gapped in prelim test: 814
Number of HSP's that attempted gapping in prelim test: 444764
Number of HSP's gapped (non-prelim): 7199
length of query: 301
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 160
effective length of database: 9,050,888,538
effective search space: 1448142166080
effective search space used: 1448142166080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)