Query 022163
Match_columns 301
No_of_seqs 205 out of 1608
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 14:57:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022163.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022163hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zdn_A Ubiquitin-conjugating e 100.0 1.5E-41 5.1E-46 292.4 15.3 151 1-154 3-158 (158)
2 2c2v_B Ubiquitin-conjugating e 100.0 8.2E-41 2.8E-45 286.6 15.0 146 8-156 2-152 (154)
3 4gpr_A Ubiquitin-conjugating e 100.0 2.1E-40 7.3E-45 283.1 16.9 144 9-155 2-150 (151)
4 2aak_A UBC1, ubiquitin conjuga 100.0 2.2E-40 7.5E-45 283.2 16.9 146 8-156 1-151 (152)
5 1ayz_A UBC2, ubiquitin-conjuga 100.0 1.6E-40 5.4E-45 289.2 16.0 147 8-157 1-152 (169)
6 2ayv_A Ubiquitin-conjugating e 100.0 4.7E-40 1.6E-44 285.5 16.6 146 6-154 16-166 (166)
7 1yh2_A HSPC150 protein similar 100.0 5.5E-40 1.9E-44 285.5 17.1 149 9-157 2-156 (169)
8 1z2u_A Ubiquitin-conjugating e 100.0 5.1E-40 1.7E-44 280.3 15.9 144 9-155 2-150 (150)
9 2c4o_A Ubiquitin-conjugating e 100.0 1.1E-39 3.6E-44 282.9 17.2 145 8-155 16-165 (165)
10 2e2c_A Ubiquitin conjugating e 100.0 8.2E-40 2.8E-44 280.8 16.1 149 1-155 1-154 (156)
11 2ucz_A UBC7, ubiquitin conjuga 100.0 9.7E-40 3.3E-44 282.6 15.8 148 8-155 1-164 (165)
12 2f4z_A Tgtwinscan_2721 - E2 do 100.0 9.8E-40 3.3E-44 289.8 15.1 152 1-155 22-192 (193)
13 2r0j_A Ubiquitin carrier prote 100.0 1.4E-39 4.7E-44 277.5 15.4 141 13-156 3-148 (149)
14 2bep_A Ubiquitin-conjugating e 100.0 2.1E-39 7.2E-44 279.1 16.6 146 7-155 4-158 (159)
15 3rcz_B SUMO-conjugating enzyme 100.0 2.3E-39 7.7E-44 280.4 16.0 148 7-155 6-163 (163)
16 2gjd_A Ubiquitin-conjugating e 100.0 2.2E-39 7.6E-44 278.5 15.6 147 8-155 1-157 (157)
17 3h8k_A Ubiquitin-conjugating e 100.0 3.5E-39 1.2E-43 278.8 16.8 146 9-154 1-162 (164)
18 1jat_A Ubiquitin-conjugating e 100.0 1.3E-39 4.3E-44 279.4 13.1 143 11-156 5-152 (155)
19 2grr_A Ubiquitin-conjugating e 100.0 4E-39 1.4E-43 278.0 15.3 148 7-155 3-160 (161)
20 1fxt_A Ubiquitin-conjugating e 100.0 1.5E-39 5.1E-44 277.1 11.6 141 12-155 2-149 (149)
21 3bzh_A Ubiquitin-conjugating e 100.0 9.1E-39 3.1E-43 283.8 16.9 143 10-155 47-194 (194)
22 3k9o_A Ubiquitin-conjugating e 100.0 6.4E-39 2.2E-43 285.8 15.5 146 8-156 2-156 (201)
23 2pwq_A Ubiquitin conjugating e 100.0 5.9E-39 2E-43 289.3 13.7 150 6-158 18-173 (216)
24 3e46_A Ubiquitin-conjugating e 100.0 2.2E-38 7.5E-43 291.6 17.6 161 4-167 50-224 (253)
25 1i7k_A Ubiquitin-conjugating e 100.0 7E-39 2.4E-43 281.3 13.6 147 7-157 26-177 (179)
26 3fn1_B NEDD8-conjugating enzym 100.0 5.6E-38 1.9E-42 272.1 17.3 149 6-155 9-167 (167)
27 1wzv_A Ubiquitin-conjugating e 100.0 2.5E-38 8.7E-43 271.2 13.8 144 11-157 4-153 (155)
28 1yrv_A Ubiquitin-conjugating l 100.0 1.8E-38 6.3E-43 276.2 12.1 146 5-152 17-168 (169)
29 1tte_A Ubiquitin-conjugating e 100.0 1E-37 3.6E-42 281.0 11.1 144 11-157 2-152 (215)
30 3rz3_A Ubiquitin-conjugating e 100.0 6E-37 2E-41 269.6 15.4 147 9-155 5-173 (183)
31 2y9m_A Ubiquitin-conjugating e 100.0 5.6E-37 1.9E-41 267.4 14.7 147 7-155 2-168 (172)
32 2awf_A Ubiquitin-conjugating e 100.0 4.2E-37 1.4E-41 268.3 13.6 141 9-149 15-172 (172)
33 2f4w_A Ubiquitin-conjugating e 100.0 7.2E-37 2.5E-41 270.1 15.0 156 7-166 10-166 (187)
34 1c4z_D UBCH7, ubiquitin conjug 100.0 2.6E-37 8.9E-42 264.6 8.8 143 12-157 3-151 (154)
35 2onu_A Ubiquitin-conjugating e 100.0 2.1E-37 7.3E-42 265.1 7.7 142 11-158 2-150 (152)
36 2z5d_A Ubiquitin-conjugating e 100.0 4.8E-37 1.7E-41 269.6 9.1 146 6-158 18-172 (179)
37 1y8x_A Ubiquitin-conjugating e 100.0 6E-36 2E-40 258.1 14.5 138 9-152 4-147 (160)
38 2nvu_C NEDD8-conjugating enzym 100.0 8.9E-36 3E-40 261.7 15.2 141 6-152 21-167 (180)
39 4ddg_A Ubiquitin-conjugating e 100.0 1.6E-35 5.6E-40 288.2 16.0 145 10-157 2-151 (399)
40 1yf9_A Ubiquitin carrier prote 100.0 5.1E-36 1.7E-40 261.3 10.3 140 11-157 12-158 (171)
41 2fo3_A Ubiquitin-conjugating e 100.0 4.1E-35 1.4E-39 243.2 12.7 114 5-122 1-117 (125)
42 3o2u_A NEDD8-conjugating enzym 100.0 6.1E-35 2.1E-39 258.4 14.0 143 6-154 24-178 (190)
43 2h2y_A Ubiquitin-conjugating e 100.0 2.7E-34 9.4E-39 241.6 15.0 118 4-126 14-134 (136)
44 4ds2_A Ubiquitin-conjugating e 100.0 1.4E-34 4.7E-39 251.0 9.4 139 6-147 3-163 (167)
45 3ceg_A Baculoviral IAP repeat- 100.0 1.6E-33 5.5E-38 266.7 16.9 152 5-156 70-244 (323)
46 2a7l_A Hypothetical ubiquitin- 100.0 1.5E-33 5.1E-38 237.3 11.4 113 5-121 17-135 (136)
47 2q0v_A Ubiquitin-conjugating e 100.0 2.7E-32 9.4E-37 234.5 12.3 128 6-137 16-155 (156)
48 2a4d_A Ubiquitin-conjugating e 100.0 4.8E-32 1.7E-36 233.9 12.5 123 7-130 21-152 (160)
49 1zuo_A Hypothetical protein LO 100.0 7.7E-33 2.6E-37 244.2 4.3 118 4-123 20-155 (186)
50 1jat_B Ubiquitin-conjugating e 100.0 9.6E-32 3.3E-36 226.4 8.6 116 11-130 6-131 (138)
51 2hlw_A Ubiquitin-conjugating e 100.0 1.7E-31 5.6E-36 232.6 8.1 121 9-130 33-162 (170)
52 2z6o_A UFM1-conjugating enzyme 99.9 2.1E-23 7.1E-28 179.7 0.4 95 13-115 34-144 (172)
53 3r3q_A Suppressor protein STP2 99.5 1.4E-14 4.7E-19 125.0 9.1 109 14-126 31-160 (162)
54 3kpa_A Probable ubiquitin fold 99.5 1.7E-15 5.9E-20 128.0 1.2 87 11-109 34-133 (168)
55 3obq_A Tumor susceptibility ge 99.2 1.1E-11 3.8E-16 105.1 5.1 80 37-125 50-140 (146)
56 2yz0_A Serine/threonine-protei 94.6 0.24 8.3E-06 40.1 9.8 79 1-81 1-85 (138)
57 2ebm_A RWD domain-containing p 94.0 0.23 7.8E-06 39.7 8.3 68 12-81 11-78 (128)
58 2day_A Ring finger protein 25; 93.4 0.48 1.6E-05 37.7 9.2 67 15-81 12-82 (128)
59 3zqs_A E3 ubiquitin-protein li 90.6 1.4 4.9E-05 38.2 9.4 83 14-121 4-86 (186)
60 1ukx_A GCN2, GCN2 EIF2alpha ki 87.7 2.4 8.2E-05 33.9 8.3 68 12-80 11-85 (137)
61 2ebk_A RWD domain-containing p 87.5 0.9 3.1E-05 36.2 5.6 65 15-80 11-78 (128)
62 2daw_A RWD domain containing p 83.0 1.6 5.3E-05 36.3 5.1 23 59-81 76-98 (154)
63 2dax_A Protein C21ORF6; RWD do 80.7 2.1 7.3E-05 35.1 5.1 23 59-81 74-96 (152)
64 1b9u_A Protein (ATP synthase); 47.0 16 0.00056 22.3 2.9 20 269-288 6-25 (34)
65 3u3c_B Paxillin LD2 peptide; 4 26.8 40 0.0014 19.4 2.0 20 12-31 6-25 (26)
66 3rls_A YAF9, protein AF-9 homo 24.6 1.2E+02 0.004 25.9 5.5 46 37-84 29-74 (175)
67 2cwb_A Chimera of immunoglobul 22.2 19 0.00064 28.5 0.0 32 123-155 24-55 (108)
68 2jo1_A Phospholemman; FXYD1, N 21.9 82 0.0028 23.0 3.4 21 267-287 20-40 (72)
No 1
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-41 Score=292.39 Aligned_cols=151 Identities=24% Similarity=0.468 Sum_probs=138.5
Q ss_pred CCcccCCCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEe
Q 022163 1 MAEDRYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLL 80 (301)
Q Consensus 1 ma~~~~~ms~~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~Fl 80 (301)
|+....+|+..+.+||++|+++|++++++||++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|+
T Consensus 3 ~~~~~~~~s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 82 (158)
T 1zdn_A 3 MNSNVENLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFL 82 (158)
T ss_dssp -----CCSCHHHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred ccccccccCHHHHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEec
Confidence 67777899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCc--eecCCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhC
Q 022163 81 TPNG--RFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFG 154 (301)
Q Consensus 81 TPn~--nv~~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya 154 (301)
||++ ||+.+|+||+++|+ +.|+|.++|++||.+|++||.+ ||+++++ |+.+|++|++.|.++||+|+++||
T Consensus 83 t~i~HPnv~~~G~iCl~iL~---~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 83 TKIFHPNVGANGEICVNVLK---RDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp SCCCCTTBCTTSBBCHHHHT---TTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred cCcccCCCCCCCEEehhhcC---CCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 9876 68889999999997 8899999999999999999965 7778776 578889999999999999999997
No 2
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.2e-41 Score=286.63 Aligned_cols=146 Identities=25% Similarity=0.478 Sum_probs=135.6
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--e
Q 022163 8 LKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG--R 85 (301)
Q Consensus 8 ms~~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~--n 85 (301)
||..+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.||++ |
T Consensus 2 ~s~~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 81 (154)
T 2c2v_B 2 GSAGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPN 81 (154)
T ss_dssp CSCSCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCc
Confidence 56678899999999999999999999999999999999999999999999999999999999999999999999876 6
Q ss_pred ecCCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCCh
Q 022163 86 FETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTP 156 (301)
Q Consensus 86 v~~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~~ 156 (301)
|+.+|+||+++|+ +.|+|+++|++||.+|++||.+ ||+++++ |+.+|++|+++|.++||+|+++||..
T Consensus 82 v~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~~ 152 (154)
T 2c2v_B 82 VDKLGRICLDILK---DKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMN 152 (154)
T ss_dssp BCTTCBBCCHHHH---TSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CccCCeEEchhcc---CCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 8889999999997 8899999999999999999975 7888876 57888999999999999999999964
No 3
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=2.1e-40 Score=283.08 Aligned_cols=144 Identities=25% Similarity=0.611 Sum_probs=136.0
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--ee
Q 022163 9 KNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG--RF 86 (301)
Q Consensus 9 s~~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~--nv 86 (301)
+..+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.||++ ||
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 81 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNI 81 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceE
Confidence 4578999999999999999999999999999999999999999999999999999999999999999999999976 58
Q ss_pred cCCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCC
Q 022163 87 ETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGT 155 (301)
Q Consensus 87 ~~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~ 155 (301)
+.+|+||+++|+ ++|+|.++|++||.+|+++|.+ ||+++++ |+.+|++|++.|.++||+|+++||.
T Consensus 82 ~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~ 150 (151)
T 4gpr_A 82 NKNGVICLDILK---DQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYAR 150 (151)
T ss_dssp CTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEEccccc---CCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 899999999998 8999999999999999999965 8888876 5788899999999999999999986
No 4
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=2.2e-40 Score=283.17 Aligned_cols=146 Identities=27% Similarity=0.557 Sum_probs=136.8
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--e
Q 022163 8 LKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG--R 85 (301)
Q Consensus 8 ms~~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~--n 85 (301)
|++.+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+++ |
T Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (152)
T 2aak_A 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPN 80 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCC
Confidence 77889999999999999999999999999999999999999999999999999999999999999999999999876 6
Q ss_pred ecCCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCCh
Q 022163 86 FETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTP 156 (301)
Q Consensus 86 v~~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~~ 156 (301)
|+.+|+||+++|. +.|+|+++|++||.+|++||.+ ||+++++ |+.+|++|+++|.++||+|+++|+..
T Consensus 81 v~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 151 (152)
T 2aak_A 81 IYADGSICLDILQ---NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTA 151 (152)
T ss_dssp BCTTSBBCCGGGT---TSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC-
T ss_pred CCCCCEEechhhc---CCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 8889999999997 8899999999999999999965 7788876 57888999999999999999999864
No 5
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-40 Score=289.22 Aligned_cols=147 Identities=24% Similarity=0.524 Sum_probs=136.9
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--e
Q 022163 8 LKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG--R 85 (301)
Q Consensus 8 ms~~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~--n 85 (301)
|++.+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|+||++ |
T Consensus 1 Ms~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPN 80 (169)
T 1ayz_A 1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPN 80 (169)
T ss_dssp -CCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCC
Confidence 67789999999999999999999999999999999999999999999999999999999999999999999999876 6
Q ss_pred ecCCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCChh
Q 022163 86 FETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTPE 157 (301)
Q Consensus 86 v~~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~~~ 157 (301)
|+.+|+||+++|+ +.|+|+++|++||.+|++||.+ ||+++++ |+.+|+++++.|.++||+|+++|+...
T Consensus 81 I~~~G~ICl~iL~---~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~~~ 152 (169)
T 1ayz_A 81 VYANGEICLDILQ---NRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWEDD 152 (169)
T ss_dssp BCTTSBBCCGGGT---TTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEeehhhc---cCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcCCC
Confidence 8889999999997 8899999999999999999965 7788876 578889999999999999999998654
No 6
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=4.7e-40 Score=285.46 Aligned_cols=146 Identities=28% Similarity=0.605 Sum_probs=134.9
Q ss_pred CCCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc-
Q 022163 6 YNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG- 84 (301)
Q Consensus 6 ~~ms~~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~- 84 (301)
-..++.+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+||++
T Consensus 16 ~~~~~~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 95 (166)
T 2ayv_A 16 NLYFQGALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYH 95 (166)
T ss_dssp ---CTTHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCB
T ss_pred cccCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcC
Confidence 3455669999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred -eecCCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhC
Q 022163 85 -RFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFG 154 (301)
Q Consensus 85 -nv~~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya 154 (301)
||+.+|+||+++|+ +.|+|+++|++||.+|++||.+ ||+++++ |+.+|++|++.|.++||+|++|||
T Consensus 96 PNI~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 96 PNINSQGAICLDILK---DQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp TTBCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CcCCCCCeEEccccc---ccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 68899999999998 8999999999999999999965 7888876 568889999999999999999997
No 7
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.5e-40 Score=285.54 Aligned_cols=149 Identities=23% Similarity=0.454 Sum_probs=138.7
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--ee
Q 022163 9 KNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG--RF 86 (301)
Q Consensus 9 s~~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~--nv 86 (301)
|..+.+||++|+++|++++++||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+||++ ||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv 81 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNI 81 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccC
Confidence 4678999999999999999999999999999999999999999999999999999999999999999999999976 68
Q ss_pred cCCCcEEeccCCCCC-CCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCChh
Q 022163 87 ETQTKICLSISNHHP-EHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTPE 157 (301)
Q Consensus 87 ~~~G~IClsiL~~~~-e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~~~ 157 (301)
+.+|+||+++|+.++ +.|+|+++|++||.+|++||.+ ||+++++ |+.+|.+|+++|.++||+|+++||...
T Consensus 82 ~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~~ 156 (169)
T 1yh2_A 82 DSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHARQK 156 (169)
T ss_dssp CTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCCC
T ss_pred CcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHcccc
Confidence 899999999998665 7899999999999999999965 7888876 568889999999999999999999864
No 8
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=5.1e-40 Score=280.34 Aligned_cols=144 Identities=27% Similarity=0.604 Sum_probs=134.8
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--ee
Q 022163 9 KNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG--RF 86 (301)
Q Consensus 9 s~~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~--nv 86 (301)
|..+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.||++ ||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 81 (150)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcC
Confidence 4568999999999999999999999999999999999999999999999999999999999999999999999865 68
Q ss_pred cCCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCC
Q 022163 87 ETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGT 155 (301)
Q Consensus 87 ~~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~ 155 (301)
+.+|+||+++|+ +.|+|+++|++||.+|++||.+ ||+++++ |+.+|++|++.|.++||+|+++||.
T Consensus 82 ~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 82 NSNGSICLDILR---SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp CTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCeEeecccc---CCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 899999999998 8999999999999999999964 7888876 5688899999999999999999984
No 9
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1.1e-39 Score=282.94 Aligned_cols=145 Identities=28% Similarity=0.599 Sum_probs=135.7
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--e
Q 022163 8 LKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG--R 85 (301)
Q Consensus 8 ms~~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~--n 85 (301)
..+.+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.||++ |
T Consensus 16 ~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPn 95 (165)
T 2c4o_A 16 RGSMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN 95 (165)
T ss_dssp CCHHHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTT
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCc
Confidence 45579999999999999999999999999999999999999999999999999999999999999999999999865 7
Q ss_pred ecCCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCC
Q 022163 86 FETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGT 155 (301)
Q Consensus 86 v~~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~ 155 (301)
|+.+|+||+++|+ +.|+|+++|++||.+|++||.+ ||+++++ |+.+|++|+++|.++||+|+++||.
T Consensus 96 V~~~G~ICl~iL~---~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 96 INSNGSICLDILR---SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp BCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred CCCCCeEeehhhc---CCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 8899999999998 8999999999999999999964 7888876 5688899999999999999999984
No 10
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=8.2e-40 Score=280.85 Aligned_cols=149 Identities=26% Similarity=0.506 Sum_probs=136.8
Q ss_pred CCcccCCCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEe
Q 022163 1 MAEDRYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLL 80 (301)
Q Consensus 1 ma~~~~~ms~~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~Fl 80 (301)
||.+ .|+..+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.
T Consensus 1 m~~~--~~~~~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 78 (156)
T 2e2c_A 1 MTTS--KERHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFT 78 (156)
T ss_dssp CCCC--CSCCCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred CCcc--ccchHHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEe
Confidence 6633 45667999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCc--eecCCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCC
Q 022163 81 TPNG--RFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGT 155 (301)
Q Consensus 81 TPn~--nv~~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~ 155 (301)
||++ ||+.+|+||+++|+ +.|+|+++|++||.+|++||.+ ||+++++ |+.+| +|+++|.++||+|+++|+.
T Consensus 79 t~i~HPnv~~~G~iCl~iL~---~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~ 154 (156)
T 2e2c_A 79 TPCWHPNVDQSGNICLDILK---ENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQS 154 (156)
T ss_dssp SCCCBTTBCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred CCcccCCCccCceEECcccc---ccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhcc
Confidence 9987 68899999999997 8899999999999999999965 7788876 56777 8999999999999999864
No 11
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=9.7e-40 Score=282.64 Aligned_cols=148 Identities=22% Similarity=0.498 Sum_probs=134.4
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEecCC-CCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--
Q 022163 8 LKNPAVKRILQEVKEMQSNPSDDFMSLPLE-ENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG-- 84 (301)
Q Consensus 8 ms~~a~kRL~kEl~~L~~~p~~gi~a~p~~-dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~-- 84 (301)
|++.+.+||++|+++|++++++||++.|.+ +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|+||++
T Consensus 1 M~~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 80 (165)
T 2ucz_A 1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHP 80 (165)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccC
Confidence 678899999999999999999999999875 79999999999999999999999999999999999999999999876
Q ss_pred eecCCCcEEeccCCC----------CCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHh
Q 022163 85 RFETQTKICLSISNH----------HPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAP 151 (301)
Q Consensus 85 nv~~~G~IClsiL~~----------~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~ 151 (301)
||+.+|+||+++|.. +.+.|+|+++|++||.+|++||.+ ||+++++ |+.+|++|+++|.++||+|++
T Consensus 81 Nv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~~ 160 (165)
T 2ucz_A 81 NIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSIL 160 (165)
T ss_dssp TBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHH
Confidence 588999999999942 147899999999999999999965 6677766 578889999999999999999
Q ss_pred hhCC
Q 022163 152 KFGT 155 (301)
Q Consensus 152 kya~ 155 (301)
+|..
T Consensus 161 ~~~~ 164 (165)
T 2ucz_A 161 KSLG 164 (165)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 9864
No 12
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=9.8e-40 Score=289.85 Aligned_cols=152 Identities=24% Similarity=0.440 Sum_probs=130.5
Q ss_pred CCcccCCCChHHHHHHHHHHHHHhhCCC-------------CCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcC
Q 022163 1 MAEDRYNLKNPAVKRILQEVKEMQSNPS-------------DDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLP 67 (301)
Q Consensus 1 ma~~~~~ms~~a~kRL~kEl~~L~~~p~-------------~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP 67 (301)
||.+...-+..+.+||++|+++|+++++ .||++.+.++|+++|+++|.||++|||+||+|+|+|.||
T Consensus 22 m~~~~~~~~~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp 101 (193)
T 2f4z_A 22 MATAQPRGTPREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIP 101 (193)
T ss_dssp ----------CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECC
T ss_pred ccccCCCCCCHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECC
Confidence 6666555566799999999999999887 799999999999999999999999999999999999999
Q ss_pred CCCCCCCCeeEEecCCc--eec-CCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHH
Q 022163 68 AEYPFKPPSFMLLTPNG--RFE-TQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRA 141 (301)
Q Consensus 68 ~dYP~~PP~V~FlTPn~--nv~-~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~ 141 (301)
++||++||+|+|+||++ ||+ .+|+||+++|+ +.|+|+++|++||.+|++||.+ ||+++++ |+.+|++|++.
T Consensus 102 ~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~~~ 178 (193)
T 2f4z_A 102 PDYPYNPPKMKFVTKIWHPNISSQTGAICLDILK---HEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENHPL 178 (193)
T ss_dssp TTTTTSCCEEEESSCCCBTTBCTTTCBBCCGGGT---TTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHH
T ss_pred CcCCCCCCeEEEecCCccCCCcCCCCEEECcccc---ccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHH
Confidence 99999999999999876 577 58999999998 7899999999999999999965 7888876 57888999999
Q ss_pred HHHHHHHHHhhhCC
Q 022163 142 LAIKSREAAPKFGT 155 (301)
Q Consensus 142 f~~kare~~~kya~ 155 (301)
|.++||+|+++||.
T Consensus 179 f~~~ar~~t~~ya~ 192 (193)
T 2f4z_A 179 FVQTAKLWTETFAK 192 (193)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcc
Confidence 99999999999985
No 13
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=1.4e-39 Score=277.52 Aligned_cols=141 Identities=27% Similarity=0.585 Sum_probs=132.6
Q ss_pred HHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--eecCCC
Q 022163 13 VKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG--RFETQT 90 (301)
Q Consensus 13 ~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~--nv~~~G 90 (301)
.+||++|+++|++++++||++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.||++ ||+.+|
T Consensus 3 ~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G 82 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKLG 82 (149)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCCC
Confidence 589999999999999999999999999999999999999999999999999999999999999999999976 588999
Q ss_pred cEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCCh
Q 022163 91 KICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTP 156 (301)
Q Consensus 91 ~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~~ 156 (301)
+||+++|+ +.|+|+++|++||.+|++||.+ ||+++++ |+.+|++|+++|.++||+|+++||..
T Consensus 83 ~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 148 (149)
T 2r0j_A 83 RICLDILK---DKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYANN 148 (149)
T ss_dssp BBCCGGGT---TTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred EEechhcC---CCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 99999998 8999999999999999999965 7788876 56888999999999999999999964
No 14
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=2.1e-39 Score=279.10 Aligned_cols=146 Identities=29% Similarity=0.499 Sum_probs=135.5
Q ss_pred CCChHHHHHHHHHHHHHhhC---CCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCC
Q 022163 7 NLKNPAVKRILQEVKEMQSN---PSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPN 83 (301)
Q Consensus 7 ~ms~~a~kRL~kEl~~L~~~---p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn 83 (301)
.|++.+.+||++|+++|+++ ++.||++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.||+
T Consensus 4 ~Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 83 (159)
T 2bep_A 4 AMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKI 83 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCC
Confidence 58889999999999999985 578999999999999999999999999999999999999999999999999999987
Q ss_pred c--eec-CCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCC
Q 022163 84 G--RFE-TQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGT 155 (301)
Q Consensus 84 ~--nv~-~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~ 155 (301)
+ ||+ .+|+||+++|+ ++|+|+++|++||.+|++||.+ ||+++++ |+.+|++|++.|.++||+|+++||.
T Consensus 84 ~HPni~~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~ 158 (159)
T 2bep_A 84 WHPNISSVTGAICLDILK---DQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAG 158 (159)
T ss_dssp CBTTBCTTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred CccCCCCCCCEEeChhhh---ccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 6 577 48999999998 8899999999999999999965 7888876 5688899999999999999999985
No 15
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=2.3e-39 Score=280.41 Aligned_cols=148 Identities=22% Similarity=0.457 Sum_probs=133.9
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCCeEEecCCC-----CccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEec
Q 022163 7 NLKNPAVKRILQEVKEMQSNPSDDFMSLPLEE-----NIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT 81 (301)
Q Consensus 7 ~ms~~a~kRL~kEl~~L~~~p~~gi~a~p~~d-----nl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlT 81 (301)
.-|..+.+||++|+++|++++++||++.|.++ |+++|+++|.||++|||+||+|+++|.||++||++||+|+|+|
T Consensus 6 ~~~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t 85 (163)
T 3rcz_B 6 HHSSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTP 85 (163)
T ss_dssp ---CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeC
Confidence 34678999999999999999999999999866 9999999999999999999999999999999999999999999
Q ss_pred CCc--eecCCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCC
Q 022163 82 PNG--RFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGT 155 (301)
Q Consensus 82 Pn~--nv~~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~ 155 (301)
+++ ||+.+|+||+++|+. .++|+|+++|++||.+|++||.+ ||+++++ |+.+|++|++.|.++||+|++|||.
T Consensus 86 ~i~HPnV~~~G~iCl~iL~~-~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya~ 163 (163)
T 3rcz_B 86 PLFHPNVYPSGTVCLSILNE-EEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENAP 163 (163)
T ss_dssp CCCSTTBCTTSBBCCGGGCT-TTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred CCccCCCCCCCcEeccccCC-CCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhCc
Confidence 876 688899999999983 24699999999999999999965 7777766 5688899999999999999999984
No 16
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=2.2e-39 Score=278.52 Aligned_cols=147 Identities=22% Similarity=0.453 Sum_probs=132.8
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCeEEecCC-----CCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecC
Q 022163 8 LKNPAVKRILQEVKEMQSNPSDDFMSLPLE-----ENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP 82 (301)
Q Consensus 8 ms~~a~kRL~kEl~~L~~~p~~gi~a~p~~-----dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTP 82 (301)
|++.+.+||++|+++|++++++||++.|.+ +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+
T Consensus 1 Ms~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 80 (157)
T 2gjd_A 1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAG 80 (157)
T ss_dssp --CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCC
Confidence 677899999999999999999999999875 489999999999999999999999999999999999999999998
Q ss_pred Cc--eecCCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCC
Q 022163 83 NG--RFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGT 155 (301)
Q Consensus 83 n~--nv~~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~ 155 (301)
++ ||+.+|+||+++|+.. ++|+|+++|++||.+|+++|.+ +|+++++ |+.+|++|+++|.++||+|+++||.
T Consensus 81 i~HPnv~~~G~iCl~iL~~~-~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 81 FYHPNVYPSGTICLSILNED-QDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp CCCTTBCTTSBBCCGGGCTT-TTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred CccCCCCCCCcEeeecccCC-CCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 76 6888999999999831 3799999999999999999965 6777766 5688899999999999999999984
No 17
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=3.5e-39 Score=278.76 Aligned_cols=146 Identities=26% Similarity=0.540 Sum_probs=133.9
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEecCCC-CccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--e
Q 022163 9 KNPAVKRILQEVKEMQSNPSDDFMSLPLEE-NIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG--R 85 (301)
Q Consensus 9 s~~a~kRL~kEl~~L~~~p~~gi~a~p~~d-nl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~--n 85 (301)
++.+.+||++|+++|++++++||++.|.++ |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.||++ |
T Consensus 1 a~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPN 80 (164)
T 3h8k_A 1 AGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPN 80 (164)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCC
Confidence 356899999999999999999999998865 9999999999999999999999999999999999999999999876 6
Q ss_pred ecCCCcEEeccCCC----------CCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhh
Q 022163 86 FETQTKICLSISNH----------HPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPK 152 (301)
Q Consensus 86 v~~~G~IClsiL~~----------~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~k 152 (301)
|+.+|+||+++|+. +.+.|+|+++|++||.+|++||.+ ||+++++ |+.+|++|+++|.++||+|++|
T Consensus 81 V~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~ 160 (164)
T 3h8k_A 81 IYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 160 (164)
T ss_dssp BCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 88899999999963 237899999999999999999965 7788876 5788899999999999999998
Q ss_pred hC
Q 022163 153 FG 154 (301)
Q Consensus 153 ya 154 (301)
++
T Consensus 161 s~ 162 (164)
T 3h8k_A 161 SL 162 (164)
T ss_dssp HH
T ss_pred hh
Confidence 75
No 18
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=1.3e-39 Score=279.39 Aligned_cols=143 Identities=27% Similarity=0.544 Sum_probs=133.8
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--eecC
Q 022163 11 PAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG--RFET 88 (301)
Q Consensus 11 ~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~--nv~~ 88 (301)
.+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+||++ ||+.
T Consensus 5 ~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 84 (155)
T 1jat_A 5 SLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDR 84 (155)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999876 6888
Q ss_pred CCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCCh
Q 022163 89 QTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTP 156 (301)
Q Consensus 89 ~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~~ 156 (301)
+|+||+++|+ +.|+|+++|++||.+|++||.+ ||+++++ |+.+|++|++.|.++||+|+++||..
T Consensus 85 ~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~ 152 (155)
T 1jat_A 85 LGRICLDVLK---TNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKK 152 (155)
T ss_dssp TCCBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSEE
T ss_pred CCEEEchhhc---cCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 9999999997 8999999999999999999965 7788776 56888899999999999999999964
No 19
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=4e-39 Score=277.99 Aligned_cols=148 Identities=24% Similarity=0.473 Sum_probs=135.0
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCCeEEecCC-----CCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEec
Q 022163 7 NLKNPAVKRILQEVKEMQSNPSDDFMSLPLE-----ENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT 81 (301)
Q Consensus 7 ~ms~~a~kRL~kEl~~L~~~p~~gi~a~p~~-----dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlT 81 (301)
+|++.+.+||++|+++|++++++||.+.|.. +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|
T Consensus 3 ~M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 82 (161)
T 2grr_A 3 HMSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEP 82 (161)
T ss_dssp -CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEec
Confidence 5888999999999999999999999998863 68999999999999999999999999999999999999999999
Q ss_pred CCc--eecCCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCC
Q 022163 82 PNG--RFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGT 155 (301)
Q Consensus 82 Pn~--nv~~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~ 155 (301)
|++ ||+.+|+||+++|+. .+.|+|.++|++||.+|++||.+ +++++++ |+.+|++|+++|.++||+|+++||.
T Consensus 83 ~i~HPnv~~~G~iCl~iL~~-~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 160 (161)
T 2grr_A 83 PLFHPNVYPSGTVCLSILEE-DKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 160 (161)
T ss_dssp CCCSTTBCTTSBBCCGGGCT-TTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred CcccCCCCCCCeEeehhcCC-CCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhc
Confidence 876 688899999999973 24899999999999999999965 6777765 6788899999999999999999986
No 20
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=1.5e-39 Score=277.14 Aligned_cols=141 Identities=26% Similarity=0.493 Sum_probs=131.6
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEecCCC-CccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--eecC
Q 022163 12 AVKRILQEVKEMQSNPSDDFMSLPLEE-NIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG--RFET 88 (301)
Q Consensus 12 a~kRL~kEl~~L~~~p~~gi~a~p~~d-nl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~--nv~~ 88 (301)
+.+||++|+++|++++++||++.+.++ |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+++ ||+.
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~ 81 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 81 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCS
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcC
Confidence 579999999999999999999999887 9999999999999999999999999999999999999999999876 5777
Q ss_pred -CCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCC
Q 022163 89 -QTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGT 155 (301)
Q Consensus 89 -~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~ 155 (301)
+|+||+++|+ ++|+|+++|++||.+|++||.+ ||+++++ |+.+|++|++.|.++||+|+++||.
T Consensus 82 ~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 82 VTGAICLDILK---NAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp SSCCBCCHHHH---TSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred CCCeEeCCcCC---CCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 8999999997 8899999999999999999965 7788876 5788899999999999999999984
No 21
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=9.1e-39 Score=283.81 Aligned_cols=143 Identities=27% Similarity=0.559 Sum_probs=134.8
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--eec
Q 022163 10 NPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG--RFE 87 (301)
Q Consensus 10 ~~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~--nv~ 87 (301)
+.+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|+|+++ ||+
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~ 126 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNIN 126 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceEC
Confidence 568999999999999999999999999999999999999999999999999999999999999999999999976 688
Q ss_pred CCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCC
Q 022163 88 TQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGT 155 (301)
Q Consensus 88 ~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~ 155 (301)
.+|.|||++|+ +.|+|.++|++||.+|++||.+ ||+++++ ++.+|.+|+++|.++||+|+++||.
T Consensus 127 ~~G~ICL~iL~---~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 127 SQGVICLDILK---DNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp TTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCceechhhh---ccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhhC
Confidence 89999999997 8999999999999999999965 8888877 5688899999999999999999984
No 22
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=6.4e-39 Score=285.85 Aligned_cols=146 Identities=29% Similarity=0.500 Sum_probs=134.6
Q ss_pred CChHHHHHHHHHHHHHhhC---CCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc
Q 022163 8 LKNPAVKRILQEVKEMQSN---PSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG 84 (301)
Q Consensus 8 ms~~a~kRL~kEl~~L~~~---p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~ 84 (301)
|++.+.+||++|+++|+++ ++.||++.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.||++
T Consensus 2 Ms~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 81 (201)
T 3k9o_A 2 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 81 (201)
T ss_dssp --CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcc
Confidence 7788999999999999987 3689999999999999999999999999999999999999999999999999999876
Q ss_pred --eec-CCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCCh
Q 022163 85 --RFE-TQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTP 156 (301)
Q Consensus 85 --nv~-~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~~ 156 (301)
||+ .+|+||+++|. ++|+|+++|++||.+|++||.+ ||+++++ |+.+|++|++.|.++||+|+++||..
T Consensus 82 HPnv~~~~G~iCl~iL~---~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 156 (201)
T 3k9o_A 82 HPNISSVTGAICLDILK---DQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 156 (201)
T ss_dssp BTTBCTTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred cCCCcCCCCeeeCcccc---cCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 577 48999999997 8999999999999999999965 8888887 57888999999999999999999976
No 23
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=5.9e-39 Score=289.32 Aligned_cols=150 Identities=25% Similarity=0.515 Sum_probs=138.0
Q ss_pred CCCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc-
Q 022163 6 YNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG- 84 (301)
Q Consensus 6 ~~ms~~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~- 84 (301)
..+.+.+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|+||++
T Consensus 18 ~~~~s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~H 97 (216)
T 2pwq_A 18 YFQGSKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWH 97 (216)
T ss_dssp -CCSCHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred ccccCHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcC
Confidence 4456789999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred -eec-CCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCChhH
Q 022163 85 -RFE-TQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTPER 158 (301)
Q Consensus 85 -nv~-~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~~~r 158 (301)
||+ .+|.||+++|+ +.|+|+++|++||.+|++||.+ ||+++++ |+.+|++|++.|.++||+|+++||....
T Consensus 98 PNI~~~~G~ICL~iL~---~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~~~~ 173 (216)
T 2pwq_A 98 PNISSQTGAICLDVLK---NEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFATGPK 173 (216)
T ss_dssp TTBCTTTCBBCCHHHH---HHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCCC-
T ss_pred CCCcCCCCEEEchhhc---ccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCCCc
Confidence 577 47999999997 7899999999999999999965 8888877 5688899999999999999999998754
No 24
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=2.2e-38 Score=291.63 Aligned_cols=161 Identities=27% Similarity=0.487 Sum_probs=143.7
Q ss_pred ccCCCChHHHHHHHHHHHHHhhC---CCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEe
Q 022163 4 DRYNLKNPAVKRILQEVKEMQSN---PSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLL 80 (301)
Q Consensus 4 ~~~~ms~~a~kRL~kEl~~L~~~---p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~Fl 80 (301)
++.+|++.+.+||++||++|+++ ++.||++.|.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|.
T Consensus 50 s~~~Ms~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~ 129 (253)
T 3e46_A 50 SEFDMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFI 129 (253)
T ss_dssp --CCCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred ccccccHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeec
Confidence 36899999999999999999987 468999999999999999999999999999999999999999999999999999
Q ss_pred cCCc--eec-CCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhC
Q 022163 81 TPNG--RFE-TQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFG 154 (301)
Q Consensus 81 TPn~--nv~-~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya 154 (301)
||++ ||+ .+|.||+++|. +.|+|.++|++||.+|++||.+ ||+++++ |+.+|.+|++.|.++||+|+++||
T Consensus 130 T~i~HPNV~~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA 206 (253)
T 3e46_A 130 TKIWHPNISSVTGAICLDILK---DQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 206 (253)
T ss_dssp SCCCBTTBCTTTCBBCCGGGT---TCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred CCCccCCccCCCCeeeccccc---CCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhc
Confidence 9876 577 48999999997 8999999999999999999965 8888887 578889999999999999999999
Q ss_pred Chh-----HHHHHHHHHH
Q 022163 155 TPE-----RQKLIDEIHE 167 (301)
Q Consensus 155 ~~~-----r~~l~~~~~~ 167 (301)
... +.+.++.+.+
T Consensus 207 ~~~~~~~~~~~~v~~l~~ 224 (253)
T 3e46_A 207 GAPVSSPEYTKKIENLCA 224 (253)
T ss_dssp CCSCCCHHHHHHHHHHHH
T ss_pred ccccCcchHHHHHHHHHH
Confidence 762 3445555544
No 25
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7e-39 Score=281.30 Aligned_cols=147 Identities=26% Similarity=0.461 Sum_probs=133.4
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--
Q 022163 7 NLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG-- 84 (301)
Q Consensus 7 ~ms~~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~-- 84 (301)
+|+..+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+||++
T Consensus 26 ~~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HP 105 (179)
T 1i7k_A 26 AARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHP 105 (179)
T ss_dssp ----CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCST
T ss_pred ccChHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccC
Confidence 378889999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred eecCCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCChh
Q 022163 85 RFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTPE 157 (301)
Q Consensus 85 nv~~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~~~ 157 (301)
||+.+|+||+++|+ +.|+|+++|++||.+|++||.+ ||+++++ |+.+| +|+++|.++||+++++++...
T Consensus 106 NV~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~~~ 177 (179)
T 1i7k_A 106 NVDTQGNISLDILK---EKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVTSQ 177 (179)
T ss_dssp TBCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC--
T ss_pred ccccCCeEEcccCc---CcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhccc
Confidence 58889999999997 8899999999999999999965 7788876 56788 999999999999999998654
No 26
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=5.6e-38 Score=272.06 Aligned_cols=149 Identities=17% Similarity=0.330 Sum_probs=134.8
Q ss_pred CCCChHHHHHHHHHHHHHhhCCCCCeEEecC-CCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc
Q 022163 6 YNLKNPAVKRILQEVKEMQSNPSDDFMSLPL-EENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG 84 (301)
Q Consensus 6 ~~ms~~a~kRL~kEl~~L~~~p~~gi~a~p~-~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~ 84 (301)
-+..+.+.+||++|+++|++++++||++.+. ++|++.|+++| ||++|||+||+|+++|.||++||++||+|+|+||++
T Consensus 9 ~~~~s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 87 (167)
T 3fn1_B 9 TRRVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIW 87 (167)
T ss_dssp CCCCCHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCC
T ss_pred ccchhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcc
Confidence 3455689999999999999999999999855 68999999999 899999999999999999999999999999999876
Q ss_pred --eecCCCcEEeccCCCC---CCCCCccccHHHHHHHHHHhCCC--CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCC
Q 022163 85 --RFETQTKICLSISNHH---PEHWQPSWSVRTALVALIAFMPT--NPNGALG--SLDYKKEERRALAIKSREAAPKFGT 155 (301)
Q Consensus 85 --nv~~~G~IClsiL~~~---~e~WsP~~tI~~IL~~I~~lL~~--nP~~~l~--A~~~~~edr~~f~~kare~~~kya~ 155 (301)
||+.+|+||+++|+.+ +++|+|.++|++||.+|++||.+ ||+++++ |+.+|++|++.|.++||+|+++||.
T Consensus 88 HPnv~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 88 HPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp CSSBCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred cCCCCCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 6888999999999853 35899999999999999999976 6778776 5788899999999999999999984
No 27
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=2.5e-38 Score=271.18 Aligned_cols=144 Identities=24% Similarity=0.448 Sum_probs=132.6
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEE-ecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--eec
Q 022163 11 PAVKRILQEVKEMQSNPSDDFMS-LPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG--RFE 87 (301)
Q Consensus 11 ~a~kRL~kEl~~L~~~p~~gi~a-~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~--nv~ 87 (301)
.+.+||++|+++|++++++||.+ .+.++|+++|+++|. |++|||+||+|+++|.||++||++||+|+|.||++ ||+
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 82 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVD 82 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCC
Confidence 47899999999999999999999 788999999999999 99999999999999999999999999999999876 688
Q ss_pred CCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCChh
Q 022163 88 TQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTPE 157 (301)
Q Consensus 88 ~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~~~ 157 (301)
.+|+||+++|+ .++|+|+++|++||.+|++||.+ ||+++++ |+.+|++|++.|.++||+|+++||...
T Consensus 83 ~~G~iCl~iL~--~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~~ 153 (155)
T 1wzv_A 83 ENGQICLPIIS--SENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVDR 153 (155)
T ss_dssp TTCBCCCGGGC--TTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCEEC
T ss_pred CCCeEeecCCC--ccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 89999999993 28999999999999999999965 7778876 578889999999999999999999753
No 28
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-38 Score=276.23 Aligned_cols=146 Identities=16% Similarity=0.377 Sum_probs=133.9
Q ss_pred cCCCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc
Q 022163 5 RYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG 84 (301)
Q Consensus 5 ~~~ms~~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~ 84 (301)
..+|++.+.+||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+||++
T Consensus 17 ~~~M~~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~ 96 (169)
T 1yrv_A 17 RGSMHGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPF 96 (169)
T ss_dssp TTGGGCHHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCC
T ss_pred cCccChHHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCc
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred --ee-cCCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhh
Q 022163 85 --RF-ETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPK 152 (301)
Q Consensus 85 --nv-~~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~k 152 (301)
|| +.+|+||+++|+ +++.|+|+++|++||.+|++||.+ ||+++++ |+.+|++|++.|.++ |+++++
T Consensus 97 HPNI~~~~G~ICL~iL~-~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 97 HPNVDPHTGQPCIDFLD-NPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp CTTBCTTTCCBCCHHHH-CGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred cCcccCCCCeEeehhhc-CCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 57 789999999997 346899999999999999999965 7788876 678889999999988 888754
No 29
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=1e-37 Score=281.01 Aligned_cols=144 Identities=25% Similarity=0.481 Sum_probs=132.7
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEecCCC-CccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--eec
Q 022163 11 PAVKRILQEVKEMQSNPSDDFMSLPLEE-NIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG--RFE 87 (301)
Q Consensus 11 ~a~kRL~kEl~~L~~~p~~gi~a~p~~d-nl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~--nv~ 87 (301)
++.+||++|+++|++++++||++.|.++ ++++|+++|.||++|||+||+|++.|.||++||++||+|+|.||++ ||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 3789999999999999999999999876 5669999999999999999999999999999999999999999876 577
Q ss_pred C-CCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCChh
Q 022163 88 T-QTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTPE 157 (301)
Q Consensus 88 ~-~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~~~ 157 (301)
. +|.||+++|+ +.|+|+++|++||.+|++||.+ ||+++++ ++.+|.+|++.|.++||+|+++||...
T Consensus 82 ~~~G~ICL~iL~---~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~~~ 152 (215)
T 1tte_A 82 SVTGAICLDILR---NAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYASET 152 (215)
T ss_dssp SSSSCCCSSTTT---CCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSCCC
T ss_pred CCCCEEECccCC---CCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhccCC
Confidence 7 8999999998 8999999999999999999975 8888876 468889999999999999999999653
No 30
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=6e-37 Score=269.64 Aligned_cols=147 Identities=27% Similarity=0.536 Sum_probs=130.6
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEe-cCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--e
Q 022163 9 KNPAVKRILQEVKEMQSNPSDDFMSL-PLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG--R 85 (301)
Q Consensus 9 s~~a~kRL~kEl~~L~~~p~~gi~a~-p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~--n 85 (301)
+..+.|||++|+++|++++++||++. +.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|+||++ |
T Consensus 5 ~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 84 (183)
T 3rz3_A 5 SPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPN 84 (183)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCC
Confidence 35799999999999999999999998 67889999999999999999999999999999999999999999999876 6
Q ss_pred ecCCCcEEeccCCCC----------CCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHH------hHHHHHHHH
Q 022163 86 FETQTKICLSISNHH----------PEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKE------ERRALAIKS 146 (301)
Q Consensus 86 v~~~G~IClsiL~~~----------~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~e------dr~~f~~ka 146 (301)
|+.+|+||+++|... .+.|+|.++|++||.+|++||.+ ||+++++ |+.+|++ ++++|.+++
T Consensus 85 V~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~~v 164 (183)
T 3rz3_A 85 IYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDII 164 (183)
T ss_dssp BCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHHHH
T ss_pred CCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHHHH
Confidence 889999999999621 27899999999999999999965 7778776 5677777 678999999
Q ss_pred HHHHhhhCC
Q 022163 147 REAAPKFGT 155 (301)
Q Consensus 147 re~~~kya~ 155 (301)
|+++.++..
T Consensus 165 ~~~v~~s~~ 173 (183)
T 3rz3_A 165 RKQVLGTKV 173 (183)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999987654
No 31
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=5.6e-37 Score=267.39 Aligned_cols=147 Identities=21% Similarity=0.375 Sum_probs=129.6
Q ss_pred CCChHHHHHHHHHHHHHhh-C-C------CC---CeEEec-CCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCC
Q 022163 7 NLKNPAVKRILQEVKEMQS-N-P------SD---DFMSLP-LEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKP 74 (301)
Q Consensus 7 ~ms~~a~kRL~kEl~~L~~-~-p------~~---gi~a~p-~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~P 74 (301)
.|++.+.+||++|+++|++ + + +. ++.+.| .++|+++|+++|.||++|||+||+|+|+|.||++||++|
T Consensus 2 ~Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~P 81 (172)
T 2y9m_A 2 AMADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNP 81 (172)
T ss_dssp --CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSC
T ss_pred CCcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCC
Confidence 4888999999999999998 5 3 33 466778 788999999999999999999999999999999999999
Q ss_pred CeeEEec-CCc--eec-CCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHH-hHHHHHHHH
Q 022163 75 PSFMLLT-PNG--RFE-TQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKE-ERRALAIKS 146 (301)
Q Consensus 75 P~V~FlT-Pn~--nv~-~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~e-dr~~f~~ka 146 (301)
|+|+|+| +++ ||+ .+|+||+++|+ ++.|+|+++|++||.+|++||.+ ||+++++ |+.+|++ |++.|.++|
T Consensus 82 P~v~f~t~~i~HPni~~~~G~iCl~iL~--~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~ 159 (172)
T 2y9m_A 82 PKISFMQNNILHCNVKSATGEICLNILK--PEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIV 159 (172)
T ss_dssp CEEEECTTSCCCTTEETTTTEECCGGGS--TTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHH
T ss_pred CEEEEeeCCeecCCCcCCCCEEeccccC--CCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHH
Confidence 9999999 765 574 68999999996 47899999999999999999965 7888876 5788888 999999999
Q ss_pred HHHHhhhCC
Q 022163 147 REAAPKFGT 155 (301)
Q Consensus 147 re~~~kya~ 155 (301)
|+|++++..
T Consensus 160 ~~~~~~~~~ 168 (172)
T 2y9m_A 160 KYFLAERER 168 (172)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 999998764
No 32
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=4.2e-37 Score=268.26 Aligned_cols=141 Identities=23% Similarity=0.559 Sum_probs=106.7
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEecCC-CCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--e
Q 022163 9 KNPAVKRILQEVKEMQSNPSDDFMSLPLE-ENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG--R 85 (301)
Q Consensus 9 s~~a~kRL~kEl~~L~~~p~~gi~a~p~~-dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~--n 85 (301)
+..+.+||++|+++|++++++||++.|.+ +|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+||++ |
T Consensus 15 ~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPN 94 (172)
T 2awf_A 15 VPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPN 94 (172)
T ss_dssp CCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred hHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCC
Confidence 45789999999999999999999999875 79999999999999999999999999999999999999999999876 6
Q ss_pred ecCCCcEEeccCCC----------CCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHH-HHHHHHHHH
Q 022163 86 FETQTKICLSISNH----------HPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERR-ALAIKSREA 149 (301)
Q Consensus 86 v~~~G~IClsiL~~----------~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~-~f~~kare~ 149 (301)
|+.+|+||+++|+. +.+.|+|+++|++||.+|++||.+ ||+++++ |+.+|++|++ +|.++||+|
T Consensus 95 V~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 95 VDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp BCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-----------------------------
T ss_pred CCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 88999999999973 136899999999999999999965 6777776 5788899999 999999875
No 33
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.2e-37 Score=270.13 Aligned_cols=156 Identities=40% Similarity=0.799 Sum_probs=124.9
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCcee
Q 022163 7 NLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRF 86 (301)
Q Consensus 7 ~ms~~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~nv 86 (301)
+.++.+.+||++|+++|++++++||.+.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|+|||++|
T Consensus 10 ~~~~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~~~~~ 89 (187)
T 2f4w_A 10 RAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRF 89 (187)
T ss_dssp ----CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCSSB
T ss_pred CCccHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCCCcee
Confidence 55667999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred cCCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchhhhHhhHHhHHHHHHHHHHHHhhhCChhHHHHHHHH
Q 022163 87 ETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALGSLDYKKEERRALAIKSREAAPKFGTPERQKLIDEI 165 (301)
Q Consensus 87 ~~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~A~~~~~edr~~f~~kare~~~kya~~~r~~l~~~~ 165 (301)
+.+|+||+++|++|++.|+|+++|++||.+|++||.+ +|+ .+++.....+++.|++.++.|.++. +.+.++..++
T Consensus 90 ~~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~--~g~~~~~~~~r~~~a~~s~~~~~~~--~~f~~~fp~~ 165 (187)
T 2f4w_A 90 KCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPT--LGSIETSDFTKRQLAVQSLAFNLKD--KVFCELFPEV 165 (187)
T ss_dssp CTTSCBC----------CCTTCCHHHHHHHHHHHHHSCCCC--TTBCCCCHHHHHHHHHHHHHHHHTC--HHHHHHCHHH
T ss_pred ccCCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCC--CcccccChHHHHHHHHHHHHHhhcC--chHHHhhHHH
Confidence 9999999999977778999999999999999999953 443 4444445678999999999998765 3444444443
Q ss_pred H
Q 022163 166 H 166 (301)
Q Consensus 166 ~ 166 (301)
.
T Consensus 166 ~ 166 (187)
T 2f4w_A 166 V 166 (187)
T ss_dssp H
T ss_pred H
Confidence 3
No 34
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=2.6e-37 Score=264.62 Aligned_cols=143 Identities=26% Similarity=0.563 Sum_probs=127.3
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEec-CCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--eecC
Q 022163 12 AVKRILQEVKEMQSNPSDDFMSLP-LEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG--RFET 88 (301)
Q Consensus 12 a~kRL~kEl~~L~~~p~~gi~a~p-~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~--nv~~ 88 (301)
+.+||++|+++|++++++|+.+.+ .++|+++|+++|. |++|||+||+|+++|.||++||++||+|+|.||++ ||+.
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 81 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDE 81 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCC
Confidence 678999999999999999998654 5789999999998 99999999999999999999999999999999987 5889
Q ss_pred CCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCChh
Q 022163 89 QTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTPE 157 (301)
Q Consensus 89 ~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~~~ 157 (301)
+|+||+++|+ +++|+|+++|++||.+|++||.+ ||+++++ |+.+|.+|++.|.++||+|+++||...
T Consensus 82 ~G~iCl~iL~--~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~~ 151 (154)
T 1c4z_D 82 KGQVCLPVIS--AENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEKR 151 (154)
T ss_dssp TCBBCCTTTS--SSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC----
T ss_pred CCEEECCCCC--CCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhcccC
Confidence 9999999995 37899999999999999999965 7778776 568888999999999999999999754
No 35
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=2.1e-37 Score=265.06 Aligned_cols=142 Identities=19% Similarity=0.423 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--eec-
Q 022163 11 PAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG--RFE- 87 (301)
Q Consensus 11 ~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~--nv~- 87 (301)
++.+||++|+++|+++ |+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|+||++ ||+
T Consensus 2 sa~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~ 78 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDE 78 (152)
T ss_dssp -CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred hHHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcC
Confidence 3568999999999874 7888889999999999999999999999999999999999999999999999876 577
Q ss_pred CCCcEEeccCCCCCCCCCccccHHHHHHH-HHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCChhH
Q 022163 88 TQTKICLSISNHHPEHWQPSWSVRTALVA-LIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTPER 158 (301)
Q Consensus 88 ~~G~IClsiL~~~~e~WsP~~tI~~IL~~-I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~~~r 158 (301)
.+|+||+++|+ +.|+|+++|++||.+ |++||.+ ||+++++ |+.+|++|++.|.++||+|+++||...+
T Consensus 79 ~~G~iCl~il~---~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~~~ 150 (152)
T 2onu_A 79 ASGSVCLDVIN---QTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYASKDL 150 (152)
T ss_dssp TTCBBCHHHHH---HHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCGGG
T ss_pred cCCeEeccccc---ccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccCcc
Confidence 48999999997 789999999999999 5788854 7778776 6788899999999999999999998754
No 36
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.8e-37 Score=269.61 Aligned_cols=146 Identities=23% Similarity=0.438 Sum_probs=128.4
Q ss_pred CCCCh--HHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCC
Q 022163 6 YNLKN--PAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPN 83 (301)
Q Consensus 6 ~~ms~--~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn 83 (301)
..|++ ++.+||++|+++|+. .|+++.+. +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|+|++
T Consensus 18 ~~ms~~~~a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i 93 (179)
T 2z5d_A 18 GSMSSPSPGKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKI 93 (179)
T ss_dssp -----CCHHHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred ccCCCchHHHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCC
Confidence 45655 589999999999985 47888877 6789999999999999999999999999999999999999999987
Q ss_pred c--eecC-CCcEEeccCCCCCCCCCccccHHHHHHH-HHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCCh
Q 022163 84 G--RFET-QTKICLSISNHHPEHWQPSWSVRTALVA-LIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTP 156 (301)
Q Consensus 84 ~--nv~~-~G~IClsiL~~~~e~WsP~~tI~~IL~~-I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~~ 156 (301)
+ ||+. +|+||+++|+ +.|+|+++|++||.+ |++||.+ ||+++++ |+.+|++|+++|.++||+|+++||..
T Consensus 94 ~HPNV~~~~G~ICL~iL~---~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~~ 170 (179)
T 2z5d_A 94 FHPNIDEASGTVCLDVIN---QTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATE 170 (179)
T ss_dssp CBTTBCTTTCBBCHHHHH---HHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSSH
T ss_pred ccCcCCCCCCeEeccccc---cCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 6 5787 9999999997 789999999999999 9999964 7777776 57888999999999999999999986
Q ss_pred hH
Q 022163 157 ER 158 (301)
Q Consensus 157 ~r 158 (301)
..
T Consensus 171 ~~ 172 (179)
T 2z5d_A 171 EA 172 (179)
T ss_dssp HH
T ss_pred ch
Confidence 54
No 37
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6e-36 Score=258.08 Aligned_cols=138 Identities=18% Similarity=0.377 Sum_probs=126.3
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCeEEe-cCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--e
Q 022163 9 KNPAVKRILQEVKEMQSNPSDDFMSL-PLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG--R 85 (301)
Q Consensus 9 s~~a~kRL~kEl~~L~~~p~~gi~a~-p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~--n 85 (301)
.+.+.+||++|+++| ++++|+++. |.++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.||++ |
T Consensus 4 ~~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (160)
T 1y8x_A 4 ASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPN 80 (160)
T ss_dssp CCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred ccHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCc
Confidence 356999999999999 567899987 7889999999998 999999999999999999999999999999999876 5
Q ss_pred ecCCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhh
Q 022163 86 FETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPK 152 (301)
Q Consensus 86 v~~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~k 152 (301)
|+.+|+||+++|+ ++|+|+++|++||.+|++||.+ ||+++++ |+.+|++|++.|.++||+|++.
T Consensus 81 v~~~G~iCl~iL~---~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~ 147 (160)
T 1y8x_A 81 IDLEGNVCLNILR---EDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 147 (160)
T ss_dssp BCTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHS
T ss_pred CCCCCeEEcccch---hhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 8889999999998 8899999999999999999965 7777776 5788899999999999999863
No 38
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.9e-36 Score=261.72 Aligned_cols=141 Identities=17% Similarity=0.335 Sum_probs=129.1
Q ss_pred CCCChHHHHHHHHHHHHHhhCCCCCeEEe-cCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc
Q 022163 6 YNLKNPAVKRILQEVKEMQSNPSDDFMSL-PLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG 84 (301)
Q Consensus 6 ~~ms~~a~kRL~kEl~~L~~~p~~gi~a~-p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~ 84 (301)
.+.++.+.+||++|+++| ++++|+++. |.++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.||++
T Consensus 21 ~~~~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~ 97 (180)
T 2nvu_C 21 SKKASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVY 97 (180)
T ss_dssp CCSCCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCC
T ss_pred cCCccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCc
Confidence 456778999999999999 577899987 8899999999999 999999999999999999999999999999999876
Q ss_pred --eecCCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhh
Q 022163 85 --RFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPK 152 (301)
Q Consensus 85 --nv~~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~k 152 (301)
||+.+|.||+++|+ ++|+|+++|++||.+|++||.+ ||+++++ |+.+|.+|++.|.++||+|++.
T Consensus 98 HPNV~~~G~iCl~iL~---~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~ 167 (180)
T 2nvu_C 98 HPNIDLEGNVALNILR---EDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 167 (180)
T ss_dssp BTTBCTTSBBCCGGGT---TSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHS
T ss_pred cCCCCCCCcEEccccc---ccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 68889999999998 8899999999999999999965 7777776 5788899999999999999874
No 39
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=1.6e-35 Score=288.24 Aligned_cols=145 Identities=27% Similarity=0.572 Sum_probs=136.7
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--eec
Q 022163 10 NPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG--RFE 87 (301)
Q Consensus 10 ~~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~--nv~ 87 (301)
+.+.|||++|+++|++++++||++.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.||++ ||+
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 81 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN 81 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccC
Confidence 468999999999999999999999999999999999999999999999999999999999999999999999876 688
Q ss_pred CCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCChh
Q 022163 88 TQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTPE 157 (301)
Q Consensus 88 ~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~~~ 157 (301)
.+|.||+++|+ ++|+|+++|++||.+|++||.+ ||+++++ |+.+|++|++.|.++||+|+++|+...
T Consensus 82 ~~G~iCl~il~---~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~~ 151 (399)
T 4ddg_A 82 SNGSISLDILR---SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAMGG 151 (399)
T ss_dssp TTCBBCCGGGT---TSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSCT
T ss_pred CCCeEeCcccc---cCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhccc
Confidence 89999999997 8999999999999999999965 8888877 578889999999999999999999763
No 40
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=5.1e-36 Score=261.29 Aligned_cols=140 Identities=21% Similarity=0.429 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--eec-
Q 022163 11 PAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG--RFE- 87 (301)
Q Consensus 11 ~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~--nv~- 87 (301)
++.+||++|+++|++++. ++ +.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+++ ||+
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~ 87 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDE 87 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcc
Confidence 478999999999999874 44 35789999999999999999999999999999999999999999999876 678
Q ss_pred CCCcEEeccCCCCCCCCCccccHHHHHHHH-HHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhhCChh
Q 022163 88 TQTKICLSISNHHPEHWQPSWSVRTALVAL-IAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKFGTPE 157 (301)
Q Consensus 88 ~~G~IClsiL~~~~e~WsP~~tI~~IL~~I-~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~kya~~~ 157 (301)
.+|+||+++|+ +.|+|+++|++||.+| ++||.+ ||+++++ |+.+|.+|++.|.++||+|+++|+...
T Consensus 88 ~~G~iCl~iL~---~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~~~ 158 (171)
T 1yf9_A 88 RSGSVCLDVIN---QTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHATPQ 158 (171)
T ss_dssp TTCBBCHHHHH---HHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCCHH
T ss_pred cCCeEeccccc---cCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcChh
Confidence 58999999997 7899999999999998 688854 7777776 568889999999999999999999864
No 41
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=4.1e-35 Score=243.15 Aligned_cols=114 Identities=27% Similarity=0.515 Sum_probs=102.3
Q ss_pred cCCCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCC-
Q 022163 5 RYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPN- 83 (301)
Q Consensus 5 ~~~ms~~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn- 83 (301)
+|||+. +.+||++|+++|++++++|+.+.+.++|+++|+++|.||++||||||+|+++|.||++||++||+|+|.|++
T Consensus 1 ~~~m~~-a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 79 (125)
T 2fo3_A 1 KYNMGN-ANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPP 79 (125)
T ss_dssp ---------CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCC
T ss_pred CCCchH-HHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCC
Confidence 588964 889999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred c--eecCCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCC
Q 022163 84 G--RFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMP 122 (301)
Q Consensus 84 ~--nv~~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~ 122 (301)
+ ||+.+|+||+++|+ ++|+|+++|++||.+|++||.
T Consensus 80 ~HPnv~~~G~iCl~iL~---~~W~P~~~i~~vl~si~~ll~ 117 (125)
T 2fo3_A 80 KHTHVYSNGDICLSLLG---DDYNPSLSISGLVLSIISMLS 117 (125)
T ss_dssp CBTTBCTTSBBCCGGGT---TTCCTTCCHHHHHHHHHHHHC
T ss_pred CCCcCCCCCEEEchhcC---CCCCCCCcHHHHHHHHHHHHh
Confidence 6 68899999999997 899999999999999999994
No 42
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=6.1e-35 Score=258.40 Aligned_cols=143 Identities=17% Similarity=0.313 Sum_probs=130.4
Q ss_pred CCCChHHHHHHHHHHHHHhhCCCCCeEEe----cCCCCcc---EEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeE
Q 022163 6 YNLKNPAVKRILQEVKEMQSNPSDDFMSL----PLEENIF---EWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFM 78 (301)
Q Consensus 6 ~~ms~~a~kRL~kEl~~L~~~p~~gi~a~----p~~dnl~---~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~ 78 (301)
.+..+.+.+||++|+++|+ +++|+++. |.++|++ +|+++|. |++|||+||+|++.|.||++||++||+|+
T Consensus 24 ~~~~s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~ 100 (190)
T 3o2u_A 24 QPNLSAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVV 100 (190)
T ss_dssp SCCCCHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEE
T ss_pred CCCccHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeE
Confidence 4556789999999999999 67899887 8899999 9999997 78899999999999999999999999999
Q ss_pred EecCCc--eecCCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHHhHHHHHHHHHHHHhhh
Q 022163 79 LLTPNG--RFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKEERRALAIKSREAAPKF 153 (301)
Q Consensus 79 FlTPn~--nv~~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~edr~~f~~kare~~~ky 153 (301)
|.||++ ||+.+|+||+++|+ ++|+|.++|++||.+|+++|.+ ||+++++ |+.+|.+|++.|.++||+|++.+
T Consensus 101 f~t~i~HPnV~~~G~iCl~iL~---~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~ 177 (190)
T 3o2u_A 101 CLKKIFHPNIDLKGNVCLNILR---EDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGG 177 (190)
T ss_dssp ECSCCCCTTBCTTSBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBTC
T ss_pred EecCcccCCCCCCCeEechhcc---CCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHhc
Confidence 999876 68889999999998 8999999999999999999965 8888887 57888999999999999999765
Q ss_pred C
Q 022163 154 G 154 (301)
Q Consensus 154 a 154 (301)
.
T Consensus 178 ~ 178 (190)
T 3o2u_A 178 S 178 (190)
T ss_dssp E
T ss_pred C
Confidence 3
No 43
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.7e-34 Score=241.57 Aligned_cols=118 Identities=27% Similarity=0.506 Sum_probs=110.2
Q ss_pred ccCCCChHHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCC
Q 022163 4 DRYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPN 83 (301)
Q Consensus 4 ~~~~ms~~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn 83 (301)
++++|+. +.+||++|+++|++++++|+.+.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.||+
T Consensus 14 ~~~~~~~-~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i 92 (136)
T 2h2y_A 14 TKYNLGN-ANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKP 92 (136)
T ss_dssp SCCCTTS-HHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSC
T ss_pred hhccchH-HHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCC
Confidence 5677774 889999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred -c--eecCCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCCCCC
Q 022163 84 -G--RFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 126 (301)
Q Consensus 84 -~--nv~~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~nP~ 126 (301)
+ ||+.+|+||+++|+ ++|+|+++|++||.+|++|| .+|+
T Consensus 93 ~~HPnv~~~G~ICl~iL~---~~WsP~~ti~~vL~si~sll-~~p~ 134 (136)
T 2h2y_A 93 PKHTHVYSNGDICLSVLG---DDYNPSLSISGLILSIISML-SSAK 134 (136)
T ss_dssp CCCTTBCTTCCBCCGGGT---TTCCTTCCHHHHHHHHHHHH-SSSC
T ss_pred CCCCcCCCCCEEECcccc---CCCCCCCcHHHHHHHHHHHH-hCcC
Confidence 5 68999999999997 89999999999999999999 4544
No 44
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=1.4e-34 Score=251.00 Aligned_cols=139 Identities=19% Similarity=0.427 Sum_probs=123.8
Q ss_pred CCCChHHHHHHHHHHHHHhhCC------------CCCeEEecCCCCccEEEEEEeCCCCCCCC--CCeEEEEEEcCCCCC
Q 022163 6 YNLKNPAVKRILQEVKEMQSNP------------SDDFMSLPLEENIFEWQFAIRGPGDTEFE--GGIYHGRIQLPAEYP 71 (301)
Q Consensus 6 ~~ms~~a~kRL~kEl~~L~~~p------------~~gi~a~p~~dnl~~W~v~I~GP~~TpYe--GG~F~~~I~fP~dYP 71 (301)
..|++.+.|||++|+++|++++ +.++++.+.++|+++|+++|.||++|||+ ||+|++.|.||++||
T Consensus 3 ~~Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP 82 (167)
T 4ds2_A 3 GSMKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYP 82 (167)
T ss_dssp --CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTT
T ss_pred ccccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCC
Confidence 4688889999999999999977 67899999999999999999999999999 999999999999999
Q ss_pred CCCCeeEEecCCc--eecCCCcEEeccCCCCCCCCCccccHHHHHH-HHHHhCC---CCCCCchh--hhHhhHHhHHHHH
Q 022163 72 FKPPSFMLLTPNG--RFETQTKICLSISNHHPEHWQPSWSVRTALV-ALIAFMP---TNPNGALG--SLDYKKEERRALA 143 (301)
Q Consensus 72 ~~PP~V~FlTPn~--nv~~~G~IClsiL~~~~e~WsP~~tI~~IL~-~I~~lL~---~nP~~~l~--A~~~~~edr~~f~ 143 (301)
++||+|+|.||++ ||+.+|+||+++|+ ++|+|+++++++|. .|++|+. .||+++++ |+.+|++|+++|.
T Consensus 83 ~~pP~v~f~t~i~HPnv~~~G~iCl~il~---~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~ 159 (167)
T 4ds2_A 83 HEPPTVRFVTPVYSPLVTGEGGICDRMVN---DFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQDFA 159 (167)
T ss_dssp TSCCEEEESSCCCCSSCCTTSCCCTHHHH---TTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHH
T ss_pred CCCCEEEEeCCcccccCCCCCEEEcccCc---CCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHHHHH
Confidence 9999999999987 68889999999997 89999999999754 5666664 26777776 6788999999999
Q ss_pred HHHH
Q 022163 144 IKSR 147 (301)
Q Consensus 144 ~kar 147 (301)
++||
T Consensus 160 ~~vr 163 (167)
T 4ds2_A 160 ARVR 163 (167)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9986
No 45
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=1.6e-33 Score=266.66 Aligned_cols=152 Identities=24% Similarity=0.328 Sum_probs=133.7
Q ss_pred cCCCChHHHHHHHHHHHHHhhCCCCC----eEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEe
Q 022163 5 RYNLKNPAVKRILQEVKEMQSNPSDD----FMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLL 80 (301)
Q Consensus 5 ~~~ms~~a~kRL~kEl~~L~~~p~~g----i~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~Fl 80 (301)
.-+|+..+.+||++|+++|++++++| +.+.+.++|++.|+++|.||++|||+||+|+|.|.||++||++||+|+|.
T Consensus 70 ~~~~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~ 149 (323)
T 3ceg_A 70 NDANSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLE 149 (323)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEe
Confidence 34688999999999999999988764 45677899999999999999999999999999999999999999999999
Q ss_pred cC-----Cc--eecCCCcEEeccCCCC----CCCCCccc-cHHHHHHHHHHhCC-CCC--CCchhh----hHhhHHhHHH
Q 022163 81 TP-----NG--RFETQTKICLSISNHH----PEHWQPSW-SVRTALVALIAFMP-TNP--NGALGS----LDYKKEERRA 141 (301)
Q Consensus 81 TP-----n~--nv~~~G~IClsiL~~~----~e~WsP~~-tI~~IL~~I~~lL~-~nP--~~~l~A----~~~~~edr~~ 141 (301)
|| ++ ||+.+|+|||++|+.+ .+.|+|++ +|++||++|++||. .+| +++++. ..++.+|++.
T Consensus 150 T~~g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~ 229 (323)
T 3ceg_A 150 TTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSRE 229 (323)
T ss_dssp CSTTTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHH
T ss_pred ccCCCcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHH
Confidence 98 44 7888999999999742 26899999 89999999999995 344 666542 4678899999
Q ss_pred HHHHHHHHHhhhCCh
Q 022163 142 LAIKSREAAPKFGTP 156 (301)
Q Consensus 142 f~~kare~~~kya~~ 156 (301)
|.++||+|++||+..
T Consensus 230 Y~~~vr~~t~k~A~~ 244 (323)
T 3ceg_A 230 YDGNIRQATVKWAML 244 (323)
T ss_dssp HHHHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHhhH
Confidence 999999999999964
No 46
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-33 Score=237.33 Aligned_cols=113 Identities=26% Similarity=0.539 Sum_probs=105.3
Q ss_pred cCCCChHHHHHHHHHHHHHhhCCCCCeEEe--cCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecC
Q 022163 5 RYNLKNPAVKRILQEVKEMQSNPSDDFMSL--PLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP 82 (301)
Q Consensus 5 ~~~ms~~a~kRL~kEl~~L~~~p~~gi~a~--p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTP 82 (301)
..+|++.+ +||++|+++|++++++||++. +.++|+++|+++|.||++||||||+|+++|.||++||++||+|+|.||
T Consensus 17 ~~~Ms~~~-~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~ 95 (136)
T 2a7l_A 17 RGSMASMQ-KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGE 95 (136)
T ss_dssp GGGGTTSC-HHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESS
T ss_pred chhccHHH-HHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCC
Confidence 45677644 999999999999999999864 888999999999999999999999999999999999999999999998
Q ss_pred Cc----eecCCCcEEeccCCCCCCCCCccccHHHHHHHHHHhC
Q 022163 83 NG----RFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM 121 (301)
Q Consensus 83 n~----nv~~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL 121 (301)
++ ||+.+|+||+++|+ ++|+|+++|++||.+|++||
T Consensus 96 i~~~HPNV~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~slL 135 (136)
T 2a7l_A 96 NIPVHPHVYSNGHICLSILT---EDWSPALSVQSVCLSIISML 135 (136)
T ss_dssp CCCCBTTBCTTCBBCCGGGT---TTCCTTSCHHHHHHHHHHHT
T ss_pred CcCCCccCCCCCeEEchhcC---CCCCCCCcHHHHHHHHHHHh
Confidence 75 68889999999998 89999999999999999998
No 47
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=99.97 E-value=2.7e-32 Score=234.52 Aligned_cols=128 Identities=21% Similarity=0.281 Sum_probs=110.9
Q ss_pred CCCChHHHHHHHHHHHHHhhC-CCCCeEEecCC-C--CccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEec
Q 022163 6 YNLKNPAVKRILQEVKEMQSN-PSDDFMSLPLE-E--NIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT 81 (301)
Q Consensus 6 ~~ms~~a~kRL~kEl~~L~~~-p~~gi~a~p~~-d--nl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlT 81 (301)
.....++.+||++|+++|+++ +++||++.+.. + |+++|+++|.||++||||||+|+++|.||++||++||+|+|+|
T Consensus 16 ~~~~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t 95 (156)
T 2q0v_A 16 FQGIVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDT 95 (156)
T ss_dssp CSSCCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESB
T ss_pred CcccchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEc
Confidence 345567999999999999998 78899998853 3 5999999999999999999999999999999999999999999
Q ss_pred CCc--eecCCCcE---EeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh--hhHhhHH
Q 022163 82 PNG--RFETQTKI---CLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG--SLDYKKE 137 (301)
Q Consensus 82 Pn~--nv~~~G~I---ClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~--A~~~~~e 137 (301)
|++ ||+.+|+| |+++|+ +|+|+++|++||.+|++||.+ ||+++++ |+.+|.+
T Consensus 96 ~i~HPNV~~~G~icisCL~iL~----~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y~~ 155 (156)
T 2q0v_A 96 KIEMSCVDNCGRVIKNNLHILK----NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVYSN 155 (156)
T ss_dssp CCCCTTBCTTSBBCGGGSHHHH----TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC--
T ss_pred ccccCCCccCCeEehhhccccc----CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHhhh
Confidence 876 68899999 899996 499999999999999999965 6666665 4455544
No 48
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=99.97 E-value=4.8e-32 Score=233.92 Aligned_cols=123 Identities=25% Similarity=0.328 Sum_probs=108.6
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCC-eEEec-CCCC--ccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecC
Q 022163 7 NLKNPAVKRILQEVKEMQSNPSDD-FMSLP-LEEN--IFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTP 82 (301)
Q Consensus 7 ~ms~~a~kRL~kEl~~L~~~p~~g-i~a~p-~~dn--l~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTP 82 (301)
.+..++.+||++|+++|++++++| +.+.+ .++| +++|+++|.||++||||||+|+++|.||++||++||+|+|+||
T Consensus 21 ~v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~ 100 (160)
T 2a4d_A 21 GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTK 100 (160)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred eeechHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecC
Confidence 456789999999999999999888 67766 4554 9999999999999999999999999999999999999999999
Q ss_pred Cc--eec-CCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC--CCCCchh
Q 022163 83 NG--RFE-TQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT--NPNGALG 130 (301)
Q Consensus 83 n~--nv~-~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~--nP~~~l~ 130 (301)
++ ||+ .+|+||+++|+.+ +.|+|+++|++||.+|++||.+ |++++++
T Consensus 101 i~HPNV~~~~G~ICl~iL~~~-~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n 152 (160)
T 2a4d_A 101 INMNGVNSSNGVVDPRAISVL-AKWQNSYSIKVVLQELRRLMMSKENMKLPQP 152 (160)
T ss_dssp CCCTTBCTTTCBBCGGGSHHH-HTCCTTCCHHHHHHHHHHHHTSTTTTTCCCC
T ss_pred ceeCCEECCCCEEehhhcCCc-cCCCccCcHHHHHHHHHHHHccCCCCCCCCC
Confidence 76 677 6899999999633 6799999999999999999964 5666665
No 49
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.97 E-value=7.7e-33 Score=244.22 Aligned_cols=118 Identities=12% Similarity=0.361 Sum_probs=107.1
Q ss_pred ccCCCChHHHHHHHHHHHHHhhCC---CCCeEEecCCCCccEEEEEEeCC-CCCCCCC-----------CeEEEEEEcCC
Q 022163 4 DRYNLKNPAVKRILQEVKEMQSNP---SDDFMSLPLEENIFEWQFAIRGP-GDTEFEG-----------GIYHGRIQLPA 68 (301)
Q Consensus 4 ~~~~ms~~a~kRL~kEl~~L~~~p---~~gi~a~p~~dnl~~W~v~I~GP-~~TpYeG-----------G~F~~~I~fP~ 68 (301)
....|+..+.+||++||++|++++ +.+|.+.|.++|+++|+++|.|| ++|||+| |+|+|+|.||+
T Consensus 20 g~~~~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~ 99 (186)
T 1zuo_A 20 GAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKD 99 (186)
T ss_dssp ----CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCT
T ss_pred CcccccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCC
Confidence 467899999999999999999988 68899999999999999999998 9999998 89999999999
Q ss_pred CCCCCCCeeEEecCCc---eecCCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC
Q 022163 69 EYPFKPPSFMLLTPNG---RFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT 123 (301)
Q Consensus 69 dYP~~PP~V~FlTPn~---nv~~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~ 123 (301)
+||++||+|+|.||++ ||+.+|.||+++|. ++.|+|+++|++||.+|++||.+
T Consensus 100 ~YP~~PP~V~f~tpi~hPnnV~~~G~ICL~iL~--~~~WsP~~ti~~VL~sI~slL~~ 155 (186)
T 1zuo_A 100 NFPFDPPFVRVVLPVLSGGYVLGGGALCMELLT--KQGWSSAYSIESVIMQINATLVK 155 (186)
T ss_dssp TTTSSCCEEEEEESCEESTTBCGGGBBCCGGGS--TTTCCTTSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCeEEEeCCccCCCccCCCCcEEeccCC--CCCCCCcCcHHHHHHHHHHHHcC
Confidence 9999999999999998 37789999999996 36899999999999999999954
No 50
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=99.97 E-value=9.6e-32 Score=226.39 Aligned_cols=116 Identities=19% Similarity=0.334 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHHhhC-CCCCeEEecCC-C--CccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc--
Q 022163 11 PAVKRILQEVKEMQSN-PSDDFMSLPLE-E--NIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG-- 84 (301)
Q Consensus 11 ~a~kRL~kEl~~L~~~-p~~gi~a~p~~-d--nl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~-- 84 (301)
++.+||++|+++|+++ +++|+++.+.. + |+++|+++|.||++||||||+|+++|.||++||++||+|+|+||++
T Consensus 6 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 85 (138)
T 1jat_B 6 PRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLP 85 (138)
T ss_dssp CHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCT
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccC
Confidence 6789999999999998 78899998853 3 5999999999999999999999999999999999999999999876
Q ss_pred eecCC-CcE--EeccCCCCCCCCCccccHHHHHHHHHHhCCC-CCCCchh
Q 022163 85 RFETQ-TKI--CLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGALG 130 (301)
Q Consensus 85 nv~~~-G~I--ClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~-nP~~~l~ 130 (301)
||+.+ |+| |+++|+ +|+|+++|++||.+|++||.+ ||+++++
T Consensus 86 nv~~~~G~i~~cL~~l~----~W~p~~~i~~vl~~i~~ll~~pn~~~p~~ 131 (138)
T 1jat_B 86 CVNPTTGEVQTDFHTLR----DWKRAYTMETLLLDLRKEMATPANKKLRQ 131 (138)
T ss_dssp TBCTTTCBBCTTSHHHH----TCCTTCCHHHHHHHHHHHHTSHHHHTSCC
T ss_pred CEeCCCCEEeeecccCC----CCCCcCcHHHHHHHHHHHHcCCCCCCCCC
Confidence 67776 999 999984 799999999999999999965 5555544
No 51
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=99.97 E-value=1.7e-31 Score=232.65 Aligned_cols=121 Identities=26% Similarity=0.328 Sum_probs=106.3
Q ss_pred ChHHHHHHHHHHHHHhhCCCCC-eEEec-CCCC--ccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc
Q 022163 9 KNPAVKRILQEVKEMQSNPSDD-FMSLP-LEEN--IFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG 84 (301)
Q Consensus 9 s~~a~kRL~kEl~~L~~~p~~g-i~a~p-~~dn--l~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~ 84 (301)
..++.+||++|+++|++++++| +.+.+ .++| +++|+++|.||++||||||+|+++|.||++||++||+|+|+||++
T Consensus 33 ~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 112 (170)
T 2hlw_A 33 KVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKIN 112 (170)
T ss_dssp CCCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCC
T ss_pred cCHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccc
Confidence 3568999999999999999888 56666 4554 999999999999999999999999999999999999999999976
Q ss_pred --eec-CCCcEEeccCCCCCCCCCccccHHHHHHHHHHhCCC--CCCCchh
Q 022163 85 --RFE-TQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT--NPNGALG 130 (301)
Q Consensus 85 --nv~-~~G~IClsiL~~~~e~WsP~~tI~~IL~~I~~lL~~--nP~~~l~ 130 (301)
||+ .+|+||+++|+.+ +.|+|+++|++||.+|++||.+ |++++++
T Consensus 113 HPNV~~~~G~ICl~iL~~~-~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n 162 (170)
T 2hlw_A 113 MNGVNSSNGVVDPRAISVL-AKWQNSYSIKVVLQELRRLMMSKENMKLPQP 162 (170)
T ss_dssp CSSBCSSSCBBCTTTCHHH-HTCCSSCCHHHHHHHHHHHHHSTTTSSSCCC
T ss_pred cCCEeCCCCEEEhhhcCCC-CCCCccCcHHHHHHHHHHHHccCCCCCCCCC
Confidence 577 6899999999633 6899999999999999999964 5566655
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.86 E-value=2.1e-23 Score=179.72 Aligned_cols=95 Identities=16% Similarity=0.258 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCC----------eEEEEEEcCCCCCCCCCeeEEecC
Q 022163 13 VKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGG----------IYHGRIQLPAEYPFKPPSFMLLTP 82 (301)
Q Consensus 13 ~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG----------~F~~~I~fP~dYP~~PP~V~FlTP 82 (301)
.+||++|++.|++ ++.+..+|++.|+++|.||.+|+|+|| .|+++|.||++||++||+|+|.++
T Consensus 34 ~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~ 107 (172)
T 2z6o_A 34 VQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPEL 107 (172)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCC
Confidence 9999999999999 467788899999999999999999999 999999999999999999999886
Q ss_pred ---CceecCCCcEEeccCCCCCC---CCCccccHHHHHH
Q 022163 83 ---NGRFETQTKICLSISNHHPE---HWQPSWSVRTALV 115 (301)
Q Consensus 83 ---n~nv~~~G~IClsiL~~~~e---~WsP~~tI~~IL~ 115 (301)
+.|+|.+|+|||++|. .. .|+|.++|.++|.
T Consensus 108 ~~~hpnmY~~G~ICLdIL~--kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 108 DGKTAKMYRGGKICLTDHF--KPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp TTTCSSBCTTSBBCCCTTH--HHHHHHHTTSCCHHHHHH
T ss_pred CCCCCCCCCCCcEechhhc--cccccccCCccCHHHHHh
Confidence 4478999999999993 13 3559999999984
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.54 E-value=1.4e-14 Score=124.97 Aligned_cols=109 Identities=16% Similarity=0.256 Sum_probs=84.8
Q ss_pred HHHHHHHHHHhhCCC---CCeEEecCCCCccEEEEEEeCCCCCCCCCCe---EEEEEEcCCCCCCCCCeeEEecC-----
Q 022163 14 KRILQEVKEMQSNPS---DDFMSLPLEENIFEWQFAIRGPGDTEFEGGI---YHGRIQLPAEYPFKPPSFMLLTP----- 82 (301)
Q Consensus 14 kRL~kEl~~L~~~p~---~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~---F~~~I~fP~dYP~~PP~V~FlTP----- 82 (301)
+|..+|+..+.+.-+ +.......+|...++-+.+.|.-.++|+||. |.+.|.||.+||++||.|.|.++
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~ 110 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMN 110 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcccc
Confidence 566777777755321 1222334467777778888887779999999 88999999999999999977541
Q ss_pred -----Cc---eecCCCcEEeccCCCCCCCCCc-cccHHHHHHHHHHhCCC-CCC
Q 022163 83 -----NG---RFETQTKICLSISNHHPEHWQP-SWSVRTALVALIAFMPT-NPN 126 (301)
Q Consensus 83 -----n~---nv~~~G~IClsiL~~~~e~WsP-~~tI~~IL~~I~~lL~~-nP~ 126 (301)
++ ||+.+|+||+++|. +|+| ..+|.++|.+|+++|.+ ||+
T Consensus 111 ~~~~~I~~hpnVD~~G~I~lpyL~----~W~p~~s~L~~ll~~l~~lf~ep~~d 160 (162)
T 3r3q_A 111 TISSSLPIQEYIDSNGWIALPILH----AWDPAAMNLIMVVQELMSLLHEPPQD 160 (162)
T ss_dssp TSCTTSTHHHHBCTTSBBCCGGGG----SCCGGGCCHHHHHHHHHHTTSCCCCC
T ss_pred ccccccCCCCCCCCCCcEeCcccc----cCCCCcCcHHHHHHHHHHHhcCCCCC
Confidence 33 78999999999994 6999 68999999999999955 554
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.51 E-value=1.7e-15 Score=128.05 Aligned_cols=87 Identities=20% Similarity=0.387 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCC----------eEEEEEEcCCCCCCCCCeeEEe
Q 022163 11 PAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGG----------IYHGRIQLPAEYPFKPPSFMLL 80 (301)
Q Consensus 11 ~a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG----------~F~~~I~fP~dYP~~PP~V~Fl 80 (301)
.=..||+.||..|-+ ++....++-..|+..+.||.||+|+|+ .|++.|.||.+||++||.|+|.
T Consensus 34 ~w~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp 107 (168)
T 3kpa_A 34 KWTARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALP 107 (168)
T ss_dssp HHHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCG
T ss_pred HHHHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecc
Confidence 357899999999976 233333344589999999999999999 9999999999999999999999
Q ss_pred cC-Cc--eecCCCcEEeccCCCCCCCCCcccc
Q 022163 81 TP-NG--RFETQTKICLSISNHHPEHWQPSWS 109 (301)
Q Consensus 81 TP-n~--nv~~~G~IClsiL~~~~e~WsP~~t 109 (301)
++ .. ++|.+|+|||+++ |+|.|+
T Consensus 108 ~ldgkt~kmYr~GkICLdIh------wkPlW~ 133 (168)
T 3kpa_A 108 ELEGKTVKMYRGGKICMTTH------FFPLWA 133 (168)
T ss_dssp GGTTTCSSEETTTEECCCTT------HHHHHH
T ss_pred cccCcCccccCCCcEEeccc------cchhhH
Confidence 85 33 6899999999974 888764
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.19 E-value=1.1e-11 Score=105.08 Aligned_cols=80 Identities=19% Similarity=0.435 Sum_probs=69.7
Q ss_pred CCCccEEEEEEeCCCCCCCCCCeEEE--EEEcCCCCCCCCCeeEEecC--------CceecCCCcEEeccCCCCCCCCCc
Q 022163 37 EENIFEWQFAIRGPGDTEFEGGIYHG--RIQLPAEYPFKPPSFMLLTP--------NGRFETQTKICLSISNHHPEHWQP 106 (301)
Q Consensus 37 ~dnl~~W~v~I~GP~~TpYeGG~F~~--~I~fP~dYP~~PP~V~FlTP--------n~nv~~~G~IClsiL~~~~e~WsP 106 (301)
..+++.|.++|. .+|+|+.|.+ .|.||.+||++||.| |.+| +.||+.+|+||+++|. +|++
T Consensus 50 ~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~----~W~~ 120 (146)
T 3obq_A 50 SRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLH----EWKH 120 (146)
T ss_dssp TCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHH----TCCT
T ss_pred hheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEeccccc----ccCC
Confidence 468999999997 7899999984 999999999999999 7765 3379999999999995 5987
Q ss_pred -cccHHHHHHHHHHhCCCCC
Q 022163 107 -SWSVRTALVALIAFMPTNP 125 (301)
Q Consensus 107 -~~tI~~IL~~I~~lL~~nP 125 (301)
..+|.+++..++..|.++|
T Consensus 121 ~~snL~~ll~~l~~~F~~ep 140 (146)
T 3obq_A 121 PQSDLLGLIQVMIVVFGDEP 140 (146)
T ss_dssp TTCCHHHHHHHHHHHHHHSC
T ss_pred CCCCHHHHHHHHHHHHhhCC
Confidence 8999999999999985543
No 56
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=94.59 E-value=0.24 Score=40.08 Aligned_cols=79 Identities=16% Similarity=0.243 Sum_probs=47.3
Q ss_pred CCcccCCCChHHHHHHHHHHHHHhhCCCCCeEEecCC------CCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCC
Q 022163 1 MAEDRYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLE------ENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKP 74 (301)
Q Consensus 1 ma~~~~~ms~~a~kRL~kEl~~L~~~p~~gi~a~p~~------dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~P 74 (301)
|..+...|. ....+...|+.-|+.--+..+...-.. +....+.+.|....+ .-..-.+.+.|.||.+||..|
T Consensus 1 m~~~~~~~~-~~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~ 78 (138)
T 2yz0_A 1 MSLSHLTLD-QYYEIQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTA 78 (138)
T ss_dssp CCCSSSCHH-HHHHHHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSC
T ss_pred CCccccCcc-chHHHHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCC
Confidence 444444333 234456788888876433334322111 124567778874322 111346789999999999999
Q ss_pred CeeEEec
Q 022163 75 PSFMLLT 81 (301)
Q Consensus 75 P~V~FlT 81 (301)
|.|.+.+
T Consensus 79 P~i~l~~ 85 (138)
T 2yz0_A 79 PEIEFKN 85 (138)
T ss_dssp CEEEEEC
T ss_pred CeEEEec
Confidence 9998764
No 57
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.01 E-value=0.23 Score=39.67 Aligned_cols=68 Identities=16% Similarity=0.221 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEec
Q 022163 12 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLT 81 (301)
Q Consensus 12 a~kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlT 81 (301)
...+...|+..|+.--+..+... .+....+.+.|..-.+..-+.-.+.+.|.||.+||..||.+.+.+
T Consensus 11 ~~e~q~~EleaL~sIy~d~~~~~--~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDSFTVL--SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEC--CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred hHHHHHHHHHHHHHHccCceEEc--cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 45667889998886433445432 222356666665322222233468899999999999999997654
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=93.38 E-value=0.48 Score=37.70 Aligned_cols=67 Identities=18% Similarity=0.254 Sum_probs=42.6
Q ss_pred HHHHHHHHHhhCCCCCeEEecCC--CCccEEEEEEeCCCCCCCC--CCeEEEEEEcCCCCCCCCCeeEEec
Q 022163 15 RILQEVKEMQSNPSDDFMSLPLE--ENIFEWQFAIRGPGDTEFE--GGIYHGRIQLPAEYPFKPPSFMLLT 81 (301)
Q Consensus 15 RL~kEl~~L~~~p~~gi~a~p~~--dnl~~W~v~I~GP~~TpYe--GG~F~~~I~fP~dYP~~PP~V~FlT 81 (301)
+...|+.-|+.--+..+...... .+...+.+.|..+.+..-+ .-.+.+.|.||.+||..+|.+.+.+
T Consensus 12 ~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 12 VLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp HHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEE
T ss_pred HHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEc
Confidence 57789988886444445443221 2345566666533221111 2468899999999999999998764
No 59
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=90.65 E-value=1.4 Score=38.21 Aligned_cols=83 Identities=16% Similarity=0.304 Sum_probs=61.8
Q ss_pred HHHHHHHHHHhhCCCCCeEEecCCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCceecCCCcEE
Q 022163 14 KRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKIC 93 (301)
Q Consensus 14 kRL~kEl~~L~~~p~~gi~a~p~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~nv~~~G~IC 93 (301)
.+|.+|+..|-=+. +.-.+.++....+.+..-. |....++|.++.+||.++|.+...-|.. +
T Consensus 4 ~~li~Ei~~iGW~~-----l~~id~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~~-~------- 65 (186)
T 3zqs_A 4 SSLIEEIGTLGWDK-----LVYADTCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPVP-F------- 65 (186)
T ss_dssp CSHHHHHHHHCGGG-----EEEECTTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSSC-C-------
T ss_pred HHHHHHHHHhCCce-----eeeecCCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCCC-c-------
Confidence 36888888884332 2223567888999998433 6778899999999999999887665652 1
Q ss_pred eccCCCCCCCCCccccHHHHHHHHHHhC
Q 022163 94 LSISNHHPEHWQPSWSVRTALVALIAFM 121 (301)
Q Consensus 94 lsiL~~~~e~WsP~~tI~~IL~~I~~lL 121 (301)
. -.|++..++.+++..++..|
T Consensus 66 ----~---~~w~~~ssL~~v~~qF~~~L 86 (186)
T 3zqs_A 66 ----C---ASWTPQSSLISIYSQFLAAI 86 (186)
T ss_dssp ----C---CCCCTTCCHHHHHHHHHHHH
T ss_pred ----c---cccCCCccHHHHHHHHHHHH
Confidence 1 35999999999988877766
No 60
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=87.66 E-value=2.4 Score=33.87 Aligned_cols=68 Identities=19% Similarity=0.187 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEecCCC-----CccEEEEEEeCCCC-CCC-CCCeEEEEEEcCCCCCCCCCeeEEe
Q 022163 12 AVKRILQEVKEMQSNPSDDFMSLPLEE-----NIFEWQFAIRGPGD-TEF-EGGIYHGRIQLPAEYPFKPPSFMLL 80 (301)
Q Consensus 12 a~kRL~kEl~~L~~~p~~gi~a~p~~d-----nl~~W~v~I~GP~~-TpY-eGG~F~~~I~fP~dYP~~PP~V~Fl 80 (301)
...+...|+..|+.--+..+....... ....+.+.|. |.+ .-- ..-.+.+.|.||.+||..+|.|.+.
T Consensus 11 ~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~ 85 (137)
T 1ukx_A 11 YSQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLK 85 (137)
T ss_dssp HHHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEE
T ss_pred hHHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEe
Confidence 445677888888764334444322111 1345666676 322 100 1236889999999999999999764
No 61
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.54 E-value=0.9 Score=36.19 Aligned_cols=65 Identities=14% Similarity=0.138 Sum_probs=39.0
Q ss_pred HHHHHHHHHhhCCCC--CeEEec-CCCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEe
Q 022163 15 RILQEVKEMQSNPSD--DFMSLP-LEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLL 80 (301)
Q Consensus 15 RL~kEl~~L~~~p~~--gi~a~p-~~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~Fl 80 (301)
+...|+..|+.--+. .+...- ...+...+.+.|...... =..-.+.+.|.||.+||..||.+.+.
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~~~~~-~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAEGFM-DADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEECCTTT-TCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecCCCCC-CCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 566788888752211 232211 112345777777632210 01236899999999999999998644
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=83.00 E-value=1.6 Score=36.27 Aligned_cols=23 Identities=13% Similarity=0.330 Sum_probs=20.5
Q ss_pred eEEEEEEcCCCCCCCCCeeEEec
Q 022163 59 IYHGRIQLPAEYPFKPPSFMLLT 81 (301)
Q Consensus 59 ~F~~~I~fP~dYP~~PP~V~FlT 81 (301)
.+.+.|.||.+||..+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 78999999999999999997554
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=80.67 E-value=2.1 Score=35.13 Aligned_cols=23 Identities=22% Similarity=0.411 Sum_probs=20.1
Q ss_pred eEEEEEEcCCCCCCCCCeeEEec
Q 022163 59 IYHGRIQLPAEYPFKPPSFMLLT 81 (301)
Q Consensus 59 ~F~~~I~fP~dYP~~PP~V~FlT 81 (301)
.+.+.|.||.+||..||.+.+..
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~ 96 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRS 96 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEEC
T ss_pred eEEEEEECCCCCCCCCCeEEEEc
Confidence 58899999999999999997654
No 64
>1b9u_A Protein (ATP synthase); membrane protein, hydrolase; HET: GMA; NMR {Synthetic} SCOP: j.35.1.1
Probab=46.96 E-value=16 Score=22.26 Aligned_cols=20 Identities=20% Similarity=0.413 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 022163 269 TWAAVGLTIAILVLLLKKFM 288 (301)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~ 288 (301)
|+..-.+..+|++++++||+
T Consensus 6 ~l~~~~i~Flil~~~l~kf~ 25 (34)
T 1b9u_A 6 TILGQAIAFVLFVLFCMKYV 25 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44455567788899999986
No 65
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=26.85 E-value=40 Score=19.39 Aligned_cols=20 Identities=30% Similarity=0.587 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHhhCCCCCe
Q 022163 12 AVKRILQEVKEMQSNPSDDF 31 (301)
Q Consensus 12 a~kRL~kEl~~L~~~p~~gi 31 (301)
-+.||.-|+...+.+|+.|.
T Consensus 6 eldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 6 ELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHhhhccCCCCCC
Confidence 57899999999999998764
No 66
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=24.58 E-value=1.2e+02 Score=25.88 Aligned_cols=46 Identities=24% Similarity=0.368 Sum_probs=33.9
Q ss_pred CCCccEEEEEEeCCCCCCCCCCeEEEEEEcCCCCCCCCCeeEEecCCc
Q 022163 37 EENIFEWQFAIRGPGDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNG 84 (301)
Q Consensus 37 ~dnl~~W~v~I~GP~~TpYeGG~F~~~I~fP~dYP~~PP~V~FlTPn~ 84 (301)
++..++|.|.+.|+.+.--..-+=++.+.|-+.||. |...+..|=+
T Consensus 29 ~~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~PPF 74 (175)
T 3rls_A 29 AEHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAPPF 74 (175)
T ss_dssp TTCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSSSE
T ss_pred CCCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCCCC
Confidence 356789999999987654444566788899999974 7777766643
No 67
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=22.23 E-value=19 Score=28.45 Aligned_cols=32 Identities=13% Similarity=-0.186 Sum_probs=0.0
Q ss_pred CCCCCchhhhHhhHHhHHHHHHHHHHHHhhhCC
Q 022163 123 TNPNGALGSLDYKKEERRALAIKSREAAPKFGT 155 (301)
Q Consensus 123 ~nP~~~l~A~~~~~edr~~f~~kare~~~kya~ 155 (301)
..|.|+.-|.++ ++++..|...+|.|+.-|+.
T Consensus 24 ~~PQDA~VA~qy-~~~~~~f~~TAr~WT~~~a~ 55 (108)
T 2cwb_A 24 TEAVDAATAEKV-FKQYANDNGVDGEWTYDDAT 55 (108)
T ss_dssp ---------------------------------
T ss_pred CCchhHHHHHHH-HhchhccccccccccccCcC
Confidence 377777776555 59999999999999966664
No 68
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=21.93 E-value=82 Score=22.96 Aligned_cols=21 Identities=19% Similarity=0.343 Sum_probs=17.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHH
Q 022163 267 LFTWAAVGLTIAILVLLLKKF 287 (301)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~ 287 (301)
.|+.|+|=..+.|++||-+|.
T Consensus 20 GLifA~vLfi~GI~iilS~Kc 40 (72)
T 2jo1_A 20 GLVIAGILFILGILIVLSRRC 40 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHcCcc
Confidence 577888888888999988885
Done!