BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022172
(301 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225452924|ref|XP_002284130.1| PREDICTED: UPF0301 protein Cpha266_0885-like isoform 1 [Vitis
vinifera]
Length = 301
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/305 (73%), Positives = 254/305 (83%), Gaps = 8/305 (2%)
Query: 1 MEACCLTSNSFNKTTELVPVSKARVVSYTKRNHNLIHFHCKRVGFSSSITCCHLESSLPS 60
MEAC LTSNSF++T EL+P KAR ++Y KR N F C++ F SSITCCHL SS S
Sbjct: 1 MEACFLTSNSFSRTIELLPSIKARNLTYPKRKAN--QFQCRKAPFPSSITCCHLGSSSSS 58
Query: 61 DDHHKPLIDADWRSFRARLVAAEQVIRPQVQEPS--VDPDAAVNYPPQNSLGDKWAHTIH 118
+D KP I ADWRSFRARLVA EQ R ++EPS VDPD+AV++P ++GDKW HTIH
Sbjct: 59 EDADKPSISADWRSFRARLVAGEQASR--LEEPSSLVDPDSAVDHPLPITIGDKWVHTIH 116
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
EPEKGCLLIATEKLDGVHIFERTVIL+LS P+GP+GIILNRPSLMSIKE RSTVLD AG
Sbjct: 117 EPEKGCLLIATEKLDGVHIFERTVILLLSTGPVGPTGIILNRPSLMSIKETRSTVLDVAG 176
Query: 179 TFSDRPLFFGGPLEEGLFLV-SPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
TFSD PLFFGGP+EEGLFLV SPKG D V K+G+FE+VM+GLY+GTKE+VGCAAEMVKR
Sbjct: 177 TFSDMPLFFGGPIEEGLFLVNSPKGDDDGVVKTGLFEEVMKGLYYGTKESVGCAAEMVKR 236
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLES-GTLGLWEELLWLMG 296
NAV EDFRFFDG CGWEKEQL +EIRAGYWTVAACSPSVIGL S G++GLWEE++ LMG
Sbjct: 237 NAVAVEDFRFFDGYCGWEKEQLRDEIRAGYWTVAACSPSVIGLTSVGSVGLWEEIIGLMG 296
Query: 297 RRKVW 301
RKVW
Sbjct: 297 PRKVW 301
>gi|224077720|ref|XP_002305378.1| predicted protein [Populus trichocarpa]
gi|222848342|gb|EEE85889.1| predicted protein [Populus trichocarpa]
Length = 303
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/304 (69%), Positives = 239/304 (78%), Gaps = 6/304 (1%)
Query: 1 MEACCLTSNSFNKTTELVPVSKARVVSYTKRNHNLIHFHCKRVGFSSSITCCHLESSLPS 60
ME C LTSNSF KT EL+P KARV SY KR+ N F KRV S+SITC H+ PS
Sbjct: 1 MEVCFLTSNSFTKTLELIPSIKARVFSYPKRSSN--AFQSKRVALSTSITCRHMPPPSPS 58
Query: 61 DDHHKPLIDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNY-PPQNSLGDKWAHTIHE 119
D +PL++ADWRSFRARLVA EQ +RP + DPD V+ PPQ ++GDKWAHTIHE
Sbjct: 59 ADDCRPLLEADWRSFRARLVANEQALRPTEPSSTADPDIVVDQQPPQITIGDKWAHTIHE 118
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
PEKGCLLIATEKLDGVHIFERTVIL+LS P P GIILNRPSLMSIKEMRST LD AG
Sbjct: 119 PEKGCLLIATEKLDGVHIFERTVILLLSTGPGSPYGIILNRPSLMSIKEMRSTALDVAGA 178
Query: 180 FSDRPLFFGGPLEEGLFLVSPKGG--GDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
FS+RPLFFGGPLEEGLFLVSP+ G D V +SGVFE+VM+G+Y+GT+E+ GCAAEM +R
Sbjct: 179 FSNRPLFFGGPLEEGLFLVSPERGYDNDRVAESGVFEEVMKGVYYGTRESAGCAAEMARR 238
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGL-ESGTLGLWEELLWLMG 296
N VG DFRFFDG CGWEK QL EEI+AGYW VAACSPSVIGL + GTLGL EE+LWLMG
Sbjct: 239 NVVGLGDFRFFDGYCGWEKGQLKEEIQAGYWAVAACSPSVIGLNKEGTLGLREEVLWLMG 298
Query: 297 RRKV 300
+ V
Sbjct: 299 LKNV 302
>gi|255584335|ref|XP_002532903.1| conserved hypothetical protein [Ricinus communis]
gi|223527337|gb|EEF29483.1| conserved hypothetical protein [Ricinus communis]
Length = 304
Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/308 (70%), Positives = 239/308 (77%), Gaps = 11/308 (3%)
Query: 1 MEACCL--TSNSFNKTTELVPVSKARVVSYTKRNHNLIHFHCKRVGFSSSITCCHLESSL 58
ME C +SNSF KT ELVP KAR SY +R HF CKR G SSSITCC S
Sbjct: 1 METYCFLSSSNSFTKTIELVPSIKARPFSYPRRTFT-NHFQCKRTGLSSSITCCR---SS 56
Query: 59 PSDDHHKPLIDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAV--NYPPQNSLGDKWAHT 116
PS D ++P ++ADWRSFRARLVA EQV R +VDPD AV ++ + + DKWAH
Sbjct: 57 PSGDEYQPYLEADWRSFRARLVANEQVFRLSESCSAVDPDTAVEMDHSLRVACADKWAHA 116
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
IHEPEKGC+LIATEKLDGVHIFERTVIL+LS+ P+GP GIILNRPSLMSIKEMRSTVLD
Sbjct: 117 IHEPEKGCILIATEKLDGVHIFERTVILLLSVGPVGPYGIILNRPSLMSIKEMRSTVLDD 176
Query: 177 AGTFSDRPLFFGGPLEEGLFLVSPKGG--GDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
AG FSDRPLFFGGPLEEGLFLVSPK G D VGKSGVFE+VM+G+Y+GTKE+ GCAAEM
Sbjct: 177 AGMFSDRPLFFGGPLEEGLFLVSPKRGYDNDRVGKSGVFEEVMKGMYYGTKESAGCAAEM 236
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLES-GTLGLWEELLW 293
VKRN VG DFRFFDG CGWEK+QL EEI AGYWTVAACS SVIGL GT GLWEE+
Sbjct: 237 VKRNVVGIGDFRFFDGHCGWEKDQLREEIAAGYWTVAACSSSVIGLHHVGTRGLWEEIHG 296
Query: 294 LMGRRKVW 301
LMG +KVW
Sbjct: 297 LMGPKKVW 304
>gi|356523588|ref|XP_003530419.1| PREDICTED: uncharacterized protein LOC100783218 [Glycine max]
Length = 301
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/304 (66%), Positives = 239/304 (78%), Gaps = 8/304 (2%)
Query: 1 MEACCLTSNSFNKTT-ELVPVSKARVVSYTKRNHNLIHFHCKRVGFSSSITCCHLESSLP 59
MEAC L+ NSF KTT +L+P + + + KR+ H C++ I+CCH+ S P
Sbjct: 1 MEACFLSHNSFTKTTDQLIPTIRNGSLPHHKRSSQ--HLQCRKARIPLPISCCHMSSPSP 58
Query: 60 SDDHHKPLIDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHE 119
D KP + +DWRSFRA+LVA EQ+ R V+E + D D V++PP ++GDKWAH IHE
Sbjct: 59 FGDDDKPTLSSDWRSFRAKLVAGEQLTR-HVEEVN-DLDTVVDHPPLITIGDKWAHVIHE 116
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
PE GCLLIATEKLDGVHIFERTVIL+LS P+GPSGIILNRPSLMSIKE RST LD GT
Sbjct: 117 PENGCLLIATEKLDGVHIFERTVILLLSTGPLGPSGIILNRPSLMSIKETRSTALDVEGT 176
Query: 180 FSDRPLFFGGPLEEGLFLVSPK--GGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
FS+ PLFFGGPLEEG+FL+SPK GGD VGKSGVFE+VM+GLY+G KE+VGCAAEMVKR
Sbjct: 177 FSNSPLFFGGPLEEGIFLLSPKEGNGGDGVGKSGVFEEVMKGLYYGAKESVGCAAEMVKR 236
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLES-GTLGLWEELLWLMG 296
NA+G DFRFFDG CGWEKEQL +EIRAGYWTVAACSPSV+GL S G++GLW+E+L LM
Sbjct: 237 NAIGLGDFRFFDGYCGWEKEQLRDEIRAGYWTVAACSPSVVGLGSVGSIGLWDEVLGLMS 296
Query: 297 RRKV 300
RRKV
Sbjct: 297 RRKV 300
>gi|359488956|ref|XP_003633846.1| PREDICTED: UPF0301 protein Cpha266_0885-like isoform 2 [Vitis
vinifera]
Length = 259
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/257 (76%), Positives = 219/257 (85%), Gaps = 6/257 (2%)
Query: 49 ITCCHLESSLPSDDHHKPLIDADWRSFRARLVAAEQVIRPQVQEPS--VDPDAAVNYPPQ 106
I CHL SS S+D KP I ADWRSFRARLVA EQ R ++EPS VDPD+AV++P
Sbjct: 5 IVGCHLGSSSSSEDADKPSISADWRSFRARLVAGEQASR--LEEPSSLVDPDSAVDHPLP 62
Query: 107 NSLGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSI 166
++GDKW HTIHEPEKGCLLIATEKLDGVHIFERTVIL+LS P+GP+GIILNRPSLMSI
Sbjct: 63 ITIGDKWVHTIHEPEKGCLLIATEKLDGVHIFERTVILLLSTGPVGPTGIILNRPSLMSI 122
Query: 167 KEMRSTVLDAAGTFSDRPLFFGGPLEEGLFLV-SPKGGGDEVGKSGVFEQVMEGLYFGTK 225
KE RSTVLD AGTFSD PLFFGGP+EEGLFLV SPKG D V K+G+FE+VM+GLY+GTK
Sbjct: 123 KETRSTVLDVAGTFSDMPLFFGGPIEEGLFLVNSPKGDDDGVVKTGLFEEVMKGLYYGTK 182
Query: 226 ETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLES-GT 284
E+VGCAAEMVKRNAV EDFRFFDG CGWEKEQL +EIRAGYWTVAACSPSVIGL S G+
Sbjct: 183 ESVGCAAEMVKRNAVAVEDFRFFDGYCGWEKEQLRDEIRAGYWTVAACSPSVIGLTSVGS 242
Query: 285 LGLWEELLWLMGRRKVW 301
+GLWEE++ LMG RKVW
Sbjct: 243 VGLWEEIIGLMGPRKVW 259
>gi|356568698|ref|XP_003552547.1| PREDICTED: UPF0301 protein BT_1078-like [Glycine max]
Length = 307
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/308 (66%), Positives = 241/308 (78%), Gaps = 10/308 (3%)
Query: 1 MEACCLTSNSFNKTT-ELVPVSKARVVSYTKRNHNLIHFHCKRVGFSSSITCCHLESSLP 59
MEAC L+ NSF KTT +L+P + + + KR+ HFH ++ I+CCH+ S P
Sbjct: 1 MEACFLSHNSFTKTTDQLIPTIRNGSLPHPKRSSQ--HFHYRKARIPLPISCCHMSSPSP 58
Query: 60 SDDHHKPLIDADWRSFRARLVAAEQVIRP--QVQEPSV-DPDAAVNYPPQNSLGDKWAHT 116
DD K + DWRSFRA+LVA EQ+ RP +V SV D D V++PP ++GDKWAH
Sbjct: 59 FDDDEKSTLSGDWRSFRAKLVAGEQLTRPVEEVSFSSVNDLDIVVDHPPLITIGDKWAHV 118
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
IHEPEKGC+LIATEKLDGVHIFERTVIL+LS P+GPSGIILNRPSLMSIKE RST LD
Sbjct: 119 IHEPEKGCILIATEKLDGVHIFERTVILLLSTGPLGPSGIILNRPSLMSIKETRSTALDV 178
Query: 177 AGTFSDRPLFFGGPLEEGLFLVSPK---GGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
GTFS+ PLFFGGPLEEGLFL+SPK GGGD VGKSGVFE+VM+GLY+G KE+VGCAAE
Sbjct: 179 EGTFSNSPLFFGGPLEEGLFLLSPKEGGGGGDGVGKSGVFEEVMKGLYYGAKESVGCAAE 238
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLES-GTLGLWEELL 292
MVKRN +G DFRFFDG CGWEKEQL +EIRAGYWTVAACSPSV+GL S G++GLW+E+L
Sbjct: 239 MVKRNVIGLGDFRFFDGYCGWEKEQLRDEIRAGYWTVAACSPSVVGLGSVGSVGLWDEVL 298
Query: 293 WLMGRRKV 300
LM RRKV
Sbjct: 299 GLMSRRKV 306
>gi|357502063|ref|XP_003621320.1| hypothetical protein MTR_7g011850 [Medicago truncatula]
gi|355496335|gb|AES77538.1| hypothetical protein MTR_7g011850 [Medicago truncatula]
Length = 291
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/302 (63%), Positives = 235/302 (77%), Gaps = 14/302 (4%)
Query: 1 MEACCLTSNSFNKTTELVPVSKARVVSYTKR-NHNLIHFHCKRVGFSSSITCCHLESSLP 59
M+AC L+ +SF K + + Y+KR +H F+ ++VG ++CC++ SS P
Sbjct: 1 MDACFLSHSSFTKI-------RGGSLPYSKRFSHQ--QFNSRKVGIPFHVSCCNMSSSSP 51
Query: 60 SDDHHKPLIDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHE 119
SDD KP ++ DWRSFRA+LVA EQ+++P+ + +PD V++PP ++GDKWAH IHE
Sbjct: 52 SDDE-KPTLNTDWRSFRAKLVAGEQLLKPEFLSSATNPDTVVDHPPLITIGDKWAHVIHE 110
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
PE+GCLLIATEKLDGVHIFERTVIL+LS P+GPSGIILNRPSLMSIKE RST D GT
Sbjct: 111 PERGCLLIATEKLDGVHIFERTVILLLSNGPIGPSGIILNRPSLMSIKETRSTAFDVMGT 170
Query: 180 FSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
FS+ PL+FGGPLEEGLFLVSPK D VGKSGVF++VM+GLY+GTKE+VG AAEMVKRN
Sbjct: 171 FSNSPLYFGGPLEEGLFLVSPK--DDVVGKSGVFDEVMKGLYYGTKESVGLAAEMVKRNV 228
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLES-GTLGLWEELLWLMGRR 298
V DFRFFDG CGWEKEQL +EIR GYWTVAACSPSV+ L + G +GLW+E+L LMG+R
Sbjct: 229 VEVGDFRFFDGYCGWEKEQLRDEIRDGYWTVAACSPSVVDLGNVGIVGLWDEVLGLMGKR 288
Query: 299 KV 300
KV
Sbjct: 289 KV 290
>gi|296082969|emb|CBI22270.3| unnamed protein product [Vitis vinifera]
Length = 266
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/304 (64%), Positives = 226/304 (74%), Gaps = 41/304 (13%)
Query: 1 MEACCLTSNSFNKTTELVPVSKARVVSYTKRNHNLIHFHCKRVGFSSSITCCHLESSLPS 60
MEAC LTSNSF++T EL+P KAR ++Y KR N F C++ F SSITCCHL SS S
Sbjct: 1 MEACFLTSNSFSRTIELLPSIKARNLTYPKRKAN--QFQCRKAPFPSSITCCHLGSSSSS 58
Query: 61 DDHHKPLIDADWRSFRARLVAAEQVIRPQVQEPS--VDPDAAVNYPPQNSLGDKWAHTIH 118
+D KP I ADWRSFRARLVA EQ R ++EPS VDPD+AV++P ++GDKW HTIH
Sbjct: 59 EDADKPSISADWRSFRARLVAGEQASR--LEEPSSLVDPDSAVDHPLPITIGDKWVHTIH 116
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
EPEKGCLLIATEKLDGVHIFERTVIL+LS P+GP+GIILNRPSLMSIKE RSTVLD
Sbjct: 117 EPEKGCLLIATEKLDGVHIFERTVILLLSTGPVGPTGIILNRPSLMSIKETRSTVLD--- 173
Query: 179 TFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
+G+FE+VM+GLY+GTKE+VGCAAEMVKRN
Sbjct: 174 -------------------------------TGLFEEVMKGLYYGTKESVGCAAEMVKRN 202
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLES-GTLGLWEELLWLMGR 297
AV EDFRFFDG CGWEKEQL +EIRAGYWTVAACSPSVIGL S G++GLWEE++ LMG
Sbjct: 203 AVAVEDFRFFDGYCGWEKEQLRDEIRAGYWTVAACSPSVIGLTSVGSVGLWEEIIGLMGP 262
Query: 298 RKVW 301
RKVW
Sbjct: 263 RKVW 266
>gi|297815230|ref|XP_002875498.1| hypothetical protein ARALYDRAFT_484691 [Arabidopsis lyrata subsp.
lyrata]
gi|297321336|gb|EFH51757.1| hypothetical protein ARALYDRAFT_484691 [Arabidopsis lyrata subsp.
lyrata]
Length = 317
Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 187/312 (59%), Positives = 223/312 (71%), Gaps = 18/312 (5%)
Query: 1 MEACCLTSNSFNKTTELVPVSKARVVSYTKRNHNLIHFHCKRVGFSSSITCCHLESSLPS 60
M+AC LTS S + ELVP KAR+ + KRN F ++V S+ C +S P
Sbjct: 1 MDACFLTSRSISGVKELVPFIKARIFTCPKRNSG--QFITRKVASPISVNCSLSDSWKPL 58
Query: 61 DDH--------HKPLIDADWRSFRARLVAAEQVIRPQVQEPS-VDPDAAVNYPPQNS--- 108
DD + DADWR FRARLV EQ + +PS +PD V+Y P +S
Sbjct: 59 DDDSDLFKDCVNNSTADADWREFRARLVVGEQAATSEKDQPSWSNPDMVVDYQPSSSSLI 118
Query: 109 -LGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIK 167
+G +WAH IHEPE GCLLIATEKLDGVHIFE+TVIL+LS+ P GP G+ILNRPSLMSIK
Sbjct: 119 TIGSRWAHKIHEPETGCLLIATEKLDGVHIFEKTVILLLSVGPSGPIGVILNRPSLMSIK 178
Query: 168 EMRSTVLDAAGTFSDRPLFFGGPLEEGLFLVSPK-GGGDEVGKSGVFEQVMEGLYFGTKE 226
E +ST+LD AGTFSD+ LFFGGPLEEGLFLVSP+ GGG+EVGKSG+F QVM+GLY+GT+E
Sbjct: 179 ETKSTILDMAGTFSDKRLFFGGPLEEGLFLVSPRCGGGNEVGKSGLFRQVMKGLYYGTRE 238
Query: 227 TVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESG--T 284
+VG AAEMVKRN VG +FRFFDG CGWEKEQL EI GYWTVAACS SV+ L S +
Sbjct: 239 SVGLAAEMVKRNLVGRSEFRFFDGYCGWEKEQLKAEILGGYWTVAACSSSVVELGSAVQS 298
Query: 285 LGLWEELLWLMG 296
GLW+E+L L+G
Sbjct: 299 HGLWDEVLGLIG 310
>gi|18406113|ref|NP_566847.1| uncharacterized protein [Arabidopsis thaliana]
gi|30689543|ref|NP_850648.1| uncharacterized protein [Arabidopsis thaliana]
gi|9293917|dbj|BAB01820.1| unnamed protein product [Arabidopsis thaliana]
gi|19310484|gb|AAL84976.1| AT3g29240/MXO21_9 [Arabidopsis thaliana]
gi|21537141|gb|AAM61482.1| unknown [Arabidopsis thaliana]
gi|22654969|gb|AAM98077.1| AT3g29240/MXO21_9 [Arabidopsis thaliana]
gi|28416521|gb|AAO42791.1| AT3g29240/MXO21_9 [Arabidopsis thaliana]
gi|332644033|gb|AEE77554.1| uncharacterized protein [Arabidopsis thaliana]
gi|332644034|gb|AEE77555.1| uncharacterized protein [Arabidopsis thaliana]
Length = 317
Score = 353 bits (905), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 187/312 (59%), Positives = 222/312 (71%), Gaps = 18/312 (5%)
Query: 1 MEACCLTSNSFNKTTELVPVSKARVVSYTKRNHNLIHFHCKRVGFSSSITCCHLESSLPS 60
M+AC LTS S + ELVP KAR+ + KRN F ++V S+ C +S P
Sbjct: 1 MDACFLTSRSISGVKELVPFIKARIFTCPKRNSG--QFVTRKVASPISVNCSLSDSWKPL 58
Query: 61 DDH--------HKPLIDADWRSFRARLVAAEQVIRPQVQEPS-VDPDAAVNYPPQNS--- 108
+D + DADWR FRARLVA EQ + +PS +PD V+Y P +S
Sbjct: 59 EDDADLFKDCVNNSTSDADWREFRARLVAGEQAATSEKDQPSWSNPDMVVDYQPSSSSLI 118
Query: 109 -LGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIK 167
+G KWAH IHEPE GCLLIATEKLDGVHIFE+TVIL+LS+ P GP G+ILNRPSLMSIK
Sbjct: 119 TIGSKWAHKIHEPETGCLLIATEKLDGVHIFEKTVILLLSVGPSGPIGVILNRPSLMSIK 178
Query: 168 EMRSTVLDAAGTFSDRPLFFGGPLEEGLFLVSPKGGGD-EVGKSGVFEQVMEGLYFGTKE 226
E +ST+LD AGTFSD+ LFFGGPLEEGLFLVSP+ GGD EVGKSGVF QVM+GLY+GT+E
Sbjct: 179 ETKSTILDMAGTFSDKRLFFGGPLEEGLFLVSPRSGGDNEVGKSGVFRQVMKGLYYGTRE 238
Query: 227 TVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESG--T 284
+VG AAEMVKRN VG + RFFDG CGWEKEQL EI GYWTVAACS +V+ L S +
Sbjct: 239 SVGLAAEMVKRNLVGRSELRFFDGYCGWEKEQLKAEILGGYWTVAACSSTVVELGSAVQS 298
Query: 285 LGLWEELLWLMG 296
GLW+E+L L+G
Sbjct: 299 HGLWDEVLGLIG 310
>gi|449447651|ref|XP_004141581.1| PREDICTED: UPF0301 protein Plut_0637-like [Cucumis sativus]
gi|449481534|ref|XP_004156211.1| PREDICTED: UPF0301 protein Plut_0637-like [Cucumis sativus]
Length = 275
Score = 352 bits (904), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 173/267 (64%), Positives = 209/267 (78%), Gaps = 9/267 (3%)
Query: 38 FHCKRVGFSSS--ITCCHLESSLPSDDHHKPLIDADWRSFRARLVAAEQVIRPQVQEPSV 95
H +R SS I+CC S L + + DWRSFRA+L+A +++ PQ+ V
Sbjct: 15 IHTRRSPTPSSLKISCCQFRSPLSGGE------EDDWRSFRAKLIATQKLSTPQISSSFV 68
Query: 96 DPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSG 155
D D V++PP SLG+KWAH IH PEKGCLLIATEKLDGVHIFERTVIL+L+ +GPSG
Sbjct: 69 DLDTVVDHPPSVSLGEKWAHVIHGPEKGCLLIATEKLDGVHIFERTVILLLNNGQLGPSG 128
Query: 156 IILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEGLFLVSPKGGG-DEVGKSGVFE 214
IILNRPSLMSIKE RST LD AGTFS++ L+FGGPLE G+FLVSPK G D VGKSGVFE
Sbjct: 129 IILNRPSLMSIKETRSTALDVAGTFSEQALYFGGPLEGGVFLVSPKTNGEDGVGKSGVFE 188
Query: 215 QVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACS 274
+VM+G+Y+GTKE+VGCAAEMVKRN VG EDFRFFDG CGWEK+QL +EI+AGYWTVAACS
Sbjct: 189 EVMKGMYYGTKESVGCAAEMVKRNLVGAEDFRFFDGYCGWEKDQLKDEIKAGYWTVAACS 248
Query: 275 PSVIGLESGTLGLWEELLWLMGRRKVW 301
P++I ++ G +GLW+ LL L+G +KVW
Sbjct: 249 PNLIQMDVGNVGLWDNLLSLLGPKKVW 275
>gi|115481544|ref|NP_001064365.1| Os10g0330400 [Oryza sativa Japonica Group]
gi|16905210|gb|AAL31080.1|AC091749_9 unknown protein [Oryza sativa Japonica Group]
gi|22655742|gb|AAN04159.1| Unknown protein [Oryza sativa Japonica Group]
gi|31431209|gb|AAP53024.1| Uncharacterized ACR, COG1678 family protein, expressed [Oryza
sativa Japonica Group]
gi|113638974|dbj|BAF26279.1| Os10g0330400 [Oryza sativa Japonica Group]
gi|125574398|gb|EAZ15682.1| hypothetical protein OsJ_31097 [Oryza sativa Japonica Group]
gi|215692436|dbj|BAG87856.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708850|dbj|BAG94119.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740755|dbj|BAG97411.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766628|dbj|BAG98690.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 296
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/306 (52%), Positives = 201/306 (65%), Gaps = 15/306 (4%)
Query: 1 MEACCLTSNSFNKTTELVPVSKARVVSYTKRNHNLIHFHCKRVGFSSSITCCHLESSLPS 60
ME C +++ + +V S A VV R H L F +R SS TCC +
Sbjct: 1 METSCFLTSNASPVKSMVMPSPAGVVK--ARPHVL--FGGRRAASSSVTTCCSY-----N 51
Query: 61 DDHHKPLIDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEP 120
+ P ID DWRSFRA+L EQ + V A P +GDKWAH + EP
Sbjct: 52 GEGAAPAIDPDWRSFRAQLYFNEQYAK-SVNPAVAAVRATATTPEPVKIGDKWAHPLVEP 110
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV--LDAAG 178
EKGCLLIATEKLDG HIFERTV+L+LS +GP G+ILNRPSLMSIKE ++ D AG
Sbjct: 111 EKGCLLIATEKLDGSHIFERTVVLLLSAGVLGPVGVILNRPSLMSIKEAQAVFAETDIAG 170
Query: 179 TFSDRPLFFGGPLEEGLFLVSPKGG--GDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
FS RPLFFGGPLEE FL+ P+ GD VG++G+F++VM G+++GT+E+VGCAAE+VK
Sbjct: 171 AFSGRPLFFGGPLEECFFLLGPRAAAAGDVVGRTGLFDEVMPGVHYGTRESVGCAAELVK 230
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTL-GLWEELLWLM 295
R VG DFRFFDG CGWE+EQL +E+RAG W VAACSP+V+GL + GLWEE+ L+
Sbjct: 231 RGVVGVRDFRFFDGFCGWEREQLRDEVRAGLWRVAACSPAVLGLATVVKGGLWEEVQGLV 290
Query: 296 GRRKVW 301
G R+VW
Sbjct: 291 GERRVW 296
>gi|125531490|gb|EAY78055.1| hypothetical protein OsI_33099 [Oryza sativa Indica Group]
Length = 296
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/306 (51%), Positives = 199/306 (65%), Gaps = 15/306 (4%)
Query: 1 MEACCLTSNSFNKTTELVPVSKARVVSYTKRNHNLIHFHCKRVGFSSSITCCHLESSLPS 60
ME C +++ + +V S A VV + + F +R SS TCC +
Sbjct: 1 METSCFLTSNASPVKSMVMPSPAGVV----KARPQVLFGGRRAASSSVTTCCSY-----N 51
Query: 61 DDHHKPLIDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEP 120
+ P ID DWRSFRA+L EQ + V A P +GDKWAH + EP
Sbjct: 52 GEGAAPAIDPDWRSFRAQLYFNEQYAK-SVNPAVAAVRATATTPEPVKIGDKWAHPLVEP 110
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV--LDAAG 178
EKGCLLIATEKLDG HIFERTV+L+LS +GP G+ILNRPSLMSIKE ++ D AG
Sbjct: 111 EKGCLLIATEKLDGSHIFERTVVLLLSAGVLGPVGVILNRPSLMSIKEAQAVFAETDIAG 170
Query: 179 TFSDRPLFFGGPLEEGLFLVSPKGG--GDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
FS RPLFFGGPLEE FL+ P+ GD VG++G+F++VM G+++GT+E+VGCAAE+VK
Sbjct: 171 AFSGRPLFFGGPLEECFFLLGPRAAAAGDVVGRTGLFDEVMPGVHYGTRESVGCAAELVK 230
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTL-GLWEELLWLM 295
R VG DFRFFDG CGWE+EQL +E+ AG W VAACSP+V+GL + GLWEE+ L+
Sbjct: 231 RGVVGVRDFRFFDGFCGWEREQLRDEVSAGLWRVAACSPAVLGLATVVKGGLWEEVQGLV 290
Query: 296 GRRKVW 301
G R+VW
Sbjct: 291 GERRVW 296
>gi|326521574|dbj|BAK00363.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 298
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/255 (58%), Positives = 183/255 (71%), Gaps = 15/255 (5%)
Query: 56 SSLPSDDHHKPLIDA-DWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWA 114
SS +D P +A DWRSFRA+LV EQ + SV+P ++ P + DKWA
Sbjct: 50 SSSEPEDRAAPSGNAIDWRSFRAQLVLKEQYAK------SVNPALRASWAPAAKIADKWA 103
Query: 115 HTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVL 174
H + EPEKGCLLIAT KLDG HIFERTVIL+LS +GP G+ILNRPSLMSIKE +S
Sbjct: 104 HPLVEPEKGCLLIATGKLDGSHIFERTVILLLSAGVLGPVGVILNRPSLMSIKEAQSLFA 163
Query: 175 ---DAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDE-----VGKSGVFEQVMEGLYFGTKE 226
D AGTFS RPLFFGGPLEE FL+ P+ GGD VG++G+FE+VM G+++GT+E
Sbjct: 164 EEADIAGTFSGRPLFFGGPLEECFFLLGPREGGDSDGGDVVGRTGLFEEVMPGVHYGTRE 223
Query: 227 TVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLG 286
+VGCAAE+VKR G DFRFFDG CGWE+EQL +E+R+G W VAACSP+V+GL G
Sbjct: 224 SVGCAAELVKRGVAGVRDFRFFDGFCGWEREQLRDEVRSGLWRVAACSPAVLGLTGIGGG 283
Query: 287 LWEELLWLMGRRKVW 301
LWEE+ L+G+R+VW
Sbjct: 284 LWEEVQELVGKRRVW 298
>gi|326516224|dbj|BAJ88135.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 276 bits (706), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 148/255 (58%), Positives = 183/255 (71%), Gaps = 15/255 (5%)
Query: 56 SSLPSDDHHKPLIDA-DWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWA 114
SS +D P +A DWRSFRA+LV EQ + SV+P ++ P + DKWA
Sbjct: 35 SSSEPEDRAAPSGNAIDWRSFRAQLVLKEQYAK------SVNPALRASWAPAAKIADKWA 88
Query: 115 HTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVL 174
H + EPEKGCLLIAT KLDG HIFERTVIL+LS +GP G+ILNRPSLMSIKE +S
Sbjct: 89 HPLVEPEKGCLLIATGKLDGSHIFERTVILLLSAGVLGPVGVILNRPSLMSIKEAQSLFA 148
Query: 175 ---DAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDE-----VGKSGVFEQVMEGLYFGTKE 226
D AGTFS RPLFFGGPLEE FL+ P+ GGD VG++G+FE+VM G+++GT+E
Sbjct: 149 EEADIAGTFSGRPLFFGGPLEECFFLLGPREGGDSDGGDVVGRTGLFEEVMPGVHYGTRE 208
Query: 227 TVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLG 286
+VGCAAE+VKR G DFRFFDG CGWE+EQL +E+R+G W VAACSP+V+GL G
Sbjct: 209 SVGCAAELVKRGVAGVRDFRFFDGFCGWEREQLRDEVRSGLWRVAACSPAVLGLTGIGGG 268
Query: 287 LWEELLWLMGRRKVW 301
LWEE+ L+G+R+VW
Sbjct: 269 LWEEVQELVGKRRVW 283
>gi|242091525|ref|XP_002441595.1| hypothetical protein SORBIDRAFT_09g030010 [Sorghum bicolor]
gi|241946880|gb|EES20025.1| hypothetical protein SORBIDRAFT_09g030010 [Sorghum bicolor]
Length = 299
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/315 (46%), Positives = 192/315 (60%), Gaps = 38/315 (12%)
Query: 3 ACCLTSNSFNKTTELVPVSKARVVSYTKRNHNLIHFHCKRVGFSSSITCCHLESSLPSDD 62
+C LTS + +K+ ++ + K L +R + C + + S+D
Sbjct: 6 SCFLTSKASSKSMAVL----LSPTGFAKPKPRLFFAGGRR---RTCAAGCSINARGASED 58
Query: 63 HHKPL-IDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPE 121
P ID DWRSFRA+L EQ PQ Q+ +V + +GDKWAH + EPE
Sbjct: 59 GGAPPPIDPDWRSFRAQLYFNEQ---PQ-QQTTV----------KKQVGDKWAHPLVEPE 104
Query: 122 KGCLLIATEKLDGVHIFERTVILILS--MEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
KGCLLIATEKLDG HIFERTVIL+LS + +GP G+ILNRPSLMSIKE T+
Sbjct: 105 KGCLLIATEKLDGSHIFERTVILLLSSGVRQLGPVGVILNRPSLMSIKEASETIFADDAD 164
Query: 180 FS----DRPLFFGGPLEEGLFLVSPKGGG---------DEVGKSGVFEQVMEGLYFGTKE 226
+ RPLFFGGPLEE F++ P+ D V ++G+FE+VM GL++GT+E
Sbjct: 165 IAAAFAGRPLFFGGPLEECFFILGPRAQSAATAGGGGGDVVARTGLFEEVMPGLHYGTRE 224
Query: 227 TVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTL- 285
TVGCAAE+ KR VG DFRFFDG CGWE+EQL +E+RAG W VAACS +V+GL +
Sbjct: 225 TVGCAAELAKRGVVGVRDFRFFDGFCGWEREQLRDEVRAGLWHVAACSAAVLGLATVVKG 284
Query: 286 GLWEELLWLMGRRKV 300
GLWEE+ L+ R+V
Sbjct: 285 GLWEEVQGLVRERRV 299
>gi|195612118|gb|ACG27889.1| uncharacterized ACR, COG1678 family protein [Zea mays]
Length = 292
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 151/314 (48%), Positives = 194/314 (61%), Gaps = 41/314 (13%)
Query: 3 ACCLTS--NSFNKTTELVPVSKARVVSYTKRNHNLIHFHCKRVGFSSSITCCHLESS--L 58
+C LTS +S +++T ++P + + K L + +G S CC S+
Sbjct: 5 SCFLTSKASSASRSTAVLPPTAP---GFAKPKPCL-----QLLGSSRRRACCGSISARGA 56
Query: 59 PSDDHHKPLIDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIH 118
P D P I DWRSFRA+L EQ+ P VQ + GD+WAH +
Sbjct: 57 PEDGAAPPPIGPDWRSFRAQLYFKEQL--PAVQ----------------TGGDRWAHPLA 98
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPM-GPSGIILNRPSLMSIKEMRSTVL--- 174
EPEKGCLLIATEKLDG HIFERTVIL+LS GP G+ILNRPSLMSIKE ++
Sbjct: 99 EPEKGCLLIATEKLDGSHIFERTVILLLSSPSSLGPVGVILNRPSLMSIKEASGSIFADD 158
Query: 175 -DAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDE-----VGKSGVFEQVMEGLYFGTKETV 228
D A F+ RPLFFGGPLEE F++ P+ V ++G+FE+VM GL++GT+ETV
Sbjct: 159 ADIARAFAGRPLFFGGPLEECFFVIGPRAAAGGGGDDAVARTGLFEEVMPGLHYGTRETV 218
Query: 229 GCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTL-GL 287
GCAAE+ KR VG DFRFFDG CGWE+EQL +E+RAG W VAACS +V+ L + GL
Sbjct: 219 GCAAELAKRGVVGVRDFRFFDGFCGWEREQLRDEVRAGLWHVAACSAAVLELATVVKGGL 278
Query: 288 WEELLWLMGRRKVW 301
WEE+ L+G R++W
Sbjct: 279 WEEVQGLVGERRLW 292
>gi|413946765|gb|AFW79414.1| putative ACR family protein [Zea mays]
Length = 292
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 142/276 (51%), Positives = 177/276 (64%), Gaps = 31/276 (11%)
Query: 39 HCKRVGFSSSITCCHLESS--LPSDDHHKPLIDADWRSFRARLVAAEQVIRPQVQEPSVD 96
+ + +G S CC S+ P D P I DWRSFRA+L EQ+ P VQ
Sbjct: 35 YLQLLGSSRRRACCGSISARGAPEDGAAPPPIGPDWRSFRAQLYFKEQL--PAVQ----- 87
Query: 97 PDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPM-GPSG 155
+ GD+WAH + EPEKGCLLIATEKLDG HIFERTVIL+LS GP G
Sbjct: 88 -----------TGGDRWAHPLAEPEKGCLLIATEKLDGSHIFERTVILLLSSPSSLGPVG 136
Query: 156 IILNRPSLMSIKEMRSTVL----DAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDE----- 206
+ILNRPSLMSIKE ++ D A F+ RPLFFGGPLEE F++ P+
Sbjct: 137 VILNRPSLMSIKEASGSIFADDADIARAFAGRPLFFGGPLEECFFVIGPRAAAGGGGDDA 196
Query: 207 VGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAG 266
V ++G+FE+VM GL++GT+ETVGCAAE+ KR VG DFRFFDG CGWE+EQL +E+RAG
Sbjct: 197 VARTGLFEEVMPGLHYGTRETVGCAAELAKRGVVGVRDFRFFDGFCGWEREQLRDEVRAG 256
Query: 267 YWTVAACSPSVIGLESGTL-GLWEELLWLMGRRKVW 301
W VAACS +V+ L + GLWEE+ L+G R++W
Sbjct: 257 LWHVAACSAAVLELATVVKGGLWEEVQGLVGERRLW 292
>gi|226497064|ref|NP_001141383.1| uncharacterized protein LOC100273474 [Zea mays]
gi|194704264|gb|ACF86216.1| unknown [Zea mays]
Length = 304
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 142/276 (51%), Positives = 177/276 (64%), Gaps = 31/276 (11%)
Query: 39 HCKRVGFSSSITCCHLESS--LPSDDHHKPLIDADWRSFRARLVAAEQVIRPQVQEPSVD 96
+ + +G S CC S+ P D P I DWRSFRA+L EQ+ P VQ
Sbjct: 47 YLQLLGSSRRRACCGSISARGAPEDGAAPPPIGPDWRSFRAQLYFKEQL--PAVQ----- 99
Query: 97 PDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPM-GPSG 155
+ GD+WAH + EPEKGCLLIATEKLDG HIFERTVIL+LS GP G
Sbjct: 100 -----------TGGDRWAHPLAEPEKGCLLIATEKLDGSHIFERTVILLLSSPSSLGPVG 148
Query: 156 IILNRPSLMSIKEMRSTVL----DAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDE----- 206
+ILNRPSLMSIKE ++ D A F+ RPLFFGGPLEE F++ P+
Sbjct: 149 VILNRPSLMSIKEASGSIFADDADIARAFAGRPLFFGGPLEECFFVIGPRAAAGGGGDDA 208
Query: 207 VGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAG 266
V ++G+FE+VM GL++GT+ETVGCAAE+ KR VG DFRFFDG CGWE+EQL +E+RAG
Sbjct: 209 VARTGLFEEVMPGLHYGTRETVGCAAELAKRGVVGVRDFRFFDGFCGWEREQLRDEVRAG 268
Query: 267 YWTVAACSPSVIGLESGTL-GLWEELLWLMGRRKVW 301
W VAACS +V+ L + GLWEE+ L+G R++W
Sbjct: 269 LWHVAACSAAVLELATVVKGGLWEEVQGLVGERRLW 304
>gi|357117673|ref|XP_003560588.1| PREDICTED: 65-kDa microtubule-associated protein 1-like
[Brachypodium distachyon]
Length = 786
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/202 (60%), Positives = 146/202 (72%), Gaps = 8/202 (3%)
Query: 104 PPQNSLGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSL 163
P + DKWAH + EPEKGCLLIAT+KLDG HIFERTVIL+LS + G+ILNRPSL
Sbjct: 589 PGPAKIADKWAHPLVEPEKGCLLIATKKLDGSHIFERTVILLLSAD----MGVILNRPSL 644
Query: 164 MSIKEMRSTV--LDAAGTFSDRPLFFGGPLEEGLFLVSPK-GGGDEVGKSGVFEQVMEGL 220
MSIKE +S D AG FS RPLFFGGPLEE FL+ P+ D VG++G+FE+VM GL
Sbjct: 645 MSIKEAQSITAETDIAGVFSGRPLFFGGPLEECFFLLGPREAANDVVGRTGLFEEVMPGL 704
Query: 221 YFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGL 280
++G +E+VG AAE+VKR DFRFFDG C WE EQL +E+RAG W VAACSP V+GL
Sbjct: 705 HYGMQESVGSAAELVKRGVADMRDFRFFDGFCAWEHEQLRDEVRAGLWRVAACSPPVLGL 764
Query: 281 ESGTL-GLWEELLWLMGRRKVW 301
S GLWEE+ L +R+VW
Sbjct: 765 TSVVKGGLWEEVQELARKRRVW 786
>gi|449441794|ref|XP_004138667.1| PREDICTED: uncharacterized protein LOC101222789 [Cucumis sativus]
Length = 362
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 148/237 (62%), Gaps = 15/237 (6%)
Query: 67 LIDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLL 126
L++ DWR FRA L A EQ + E V+ A N L KWAH I PE GC+L
Sbjct: 120 LVNLDWREFRANLFAREQA---EKVEADVETQTA-NAHESKGLALKWAHPIPMPETGCVL 175
Query: 127 IATEKLDGVHIFERTVILIL---SMEPM-GPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
+ATEKLDGV FERTV+L+L S P GP G+++NRP IK M+ T +D A TFS+
Sbjct: 176 VATEKLDGVRTFERTVVLLLRSGSRHPQEGPFGVVINRPLHKKIKHMKPTNIDLATTFSE 235
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
L FGGPLE +FL+ K G E K FE+V+ GL FG + T+ AA +VK+ + P
Sbjct: 236 CSLHFGGPLEASMFLL--KAG--EKSKLHGFEEVIPGLCFGARNTLDEAAVLVKKGILKP 291
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIG---LESGTLGLWEELLWLMG 296
+DFRFF G GW+ +QL EEI + YW VAACS ++IG +S + GLWEE+L LMG
Sbjct: 292 QDFRFFVGYAGWQLDQLREEIESDYWYVAACSSNLIGGISSDSSSEGLWEEILQLMG 348
>gi|449490162|ref|XP_004158526.1| PREDICTED: uncharacterized LOC101222789 [Cucumis sativus]
Length = 362
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 148/237 (62%), Gaps = 15/237 (6%)
Query: 67 LIDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLL 126
L++ DWR FRA L A EQ + E V+ A N L KWAH I PE GC+L
Sbjct: 120 LVNLDWREFRANLFAREQA---EKVEADVETQTA-NAHESKGLALKWAHPIPMPETGCVL 175
Query: 127 IATEKLDGVHIFERTVILIL---SMEPM-GPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
+ATEKLDGV FERTV+L+L S P GP G+++NRP IK M+ T +D A TFS+
Sbjct: 176 VATEKLDGVRTFERTVVLLLRSGSRHPQEGPFGVVINRPLHKKIKHMKPTNIDLATTFSE 235
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
L FGGPLE +FL+ K G E K FE+V+ GL FG + T+ AA +VK+ + P
Sbjct: 236 CSLHFGGPLEASMFLL--KAG--EKSKLHGFEEVIPGLCFGARNTLDEAAVLVKKGILKP 291
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIG---LESGTLGLWEELLWLMG 296
+DFRFF G GW+ +QL EEI + YW VAACS ++IG +S + GLWEE+L LMG
Sbjct: 292 QDFRFFVGYAGWQLDQLREEIESDYWYVAACSSNLIGGISSDSSSEGLWEEILQLMG 348
>gi|225460185|ref|XP_002279455.1| PREDICTED: uncharacterized protein LOC100260279 [Vitis vinifera]
gi|147778834|emb|CAN64828.1| hypothetical protein VITISV_030309 [Vitis vinifera]
gi|297741045|emb|CBI31357.3| unnamed protein product [Vitis vinifera]
Length = 348
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/235 (48%), Positives = 145/235 (61%), Gaps = 14/235 (5%)
Query: 68 IDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLI 127
I DWR FRA L A EQ + +P P+ LG KWAH I PE GC+L+
Sbjct: 108 IIVDWREFRAALFAREQA---EKADPEAHSQGGTPQEPK-PLGLKWAHPIPVPETGCVLV 163
Query: 128 ATEKLDGVHIFERTVILIL---SMEPM-GPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
ATEKLDGV FERTV+L+L + P GP G+++NRP IK M+ T LD A TF+D
Sbjct: 164 ATEKLDGVRSFERTVVLLLRSGTRHPQEGPFGVVINRPLHKKIKHMKPTNLDLATTFADC 223
Query: 184 PLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPE 243
L FGGPLE +FL+ K G E K E+V+ GL +G + ++ AA++VK+ + P+
Sbjct: 224 SLHFGGPLEASMFLL--KTG--ENPKLPGLEEVIPGLCYGARNSLDEAAKLVKQGVLKPQ 279
Query: 244 DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESG--TLGLWEELLWLMG 296
DFRFF G GW+ +QL EEI + YW VAACSP+VI S + GLWEE+L LMG
Sbjct: 280 DFRFFVGYAGWQLDQLREEIESDYWYVAACSPNVISGVSAESSSGLWEEVLQLMG 334
>gi|224145059|ref|XP_002325512.1| predicted protein [Populus trichocarpa]
gi|222862387|gb|EEE99893.1| predicted protein [Populus trichocarpa]
Length = 344
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 106/237 (44%), Positives = 145/237 (61%), Gaps = 17/237 (7%)
Query: 68 IDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNS-LGDKWAHTIHEPEKGCLL 126
++ DWR FRA L A E+ + + D P ++ LG KWAH I PE GC+L
Sbjct: 103 VNFDWREFRANLFAQEKAGKAES-----DAHNQTGTPQESKPLGLKWAHPIPVPETGCVL 157
Query: 127 IATEKLDGVHIFERTVILIL---SMEPM-GPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
+ATEKLDGV FERTV+L+L + P GP G+++NRP ++ M+ T ++ A TF+D
Sbjct: 158 VATEKLDGVRTFERTVVLLLRSGTRHPQEGPFGVVINRPLNKKVRHMKPTNMELATTFAD 217
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
L FGGPLE +FL+ K G E K FE+V+ GL FG + ++ AA +VK+ + P
Sbjct: 218 FSLHFGGPLEASMFLL--KTG--EKTKLEEFEEVIPGLCFGARNSLDEAAALVKKGVLKP 273
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI---GLESGTLGLWEELLWLMG 296
+DFRFF G GW+ +QL EEI + YW VAACS ++I S + LWEE+L LMG
Sbjct: 274 QDFRFFVGYAGWQLDQLREEIESNYWYVAACSSNLICGGSSGSSSESLWEEILQLMG 330
>gi|255574267|ref|XP_002528048.1| electron transporter, putative [Ricinus communis]
gi|223532578|gb|EEF34366.1| electron transporter, putative [Ricinus communis]
Length = 350
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/237 (44%), Positives = 145/237 (61%), Gaps = 17/237 (7%)
Query: 68 IDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNS-LGDKWAHTIHEPEKGCLL 126
++ DWR FRA++V I+ Q + +D V P + LG KWAH I PE GC+L
Sbjct: 109 VNLDWREFRAKMV-----IQEQAEIAEIDAANQVITPRDSKPLGLKWAHPISVPETGCVL 163
Query: 127 IATEKLDGVHIFERTVILIL---SMEPM-GPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
+ATEKLDGV FERTV+L+L + P GP G+++NRP IK M+ T + A TF+D
Sbjct: 164 VATEKLDGVRTFERTVVLLLRSGTRHPQEGPFGVVINRPLNKKIKHMKPTNKELATTFAD 223
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
L FGGPLE +FL+ E K FE+V+ GL FG + ++ AA +VK+ + P
Sbjct: 224 CSLHFGGPLEASMFLLQT----GEKEKLPGFEEVIPGLCFGARNSLDEAAALVKKGVLKP 279
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI---GLESGTLGLWEELLWLMG 296
+DFRFF G GW+ +QL EEI + YW VA+CS ++I +S + LWEE+L LMG
Sbjct: 280 QDFRFFVGYAGWQLDQLREEIESDYWYVASCSSNLICGNSSDSSSESLWEEILQLMG 336
>gi|297851802|ref|XP_002893782.1| hypothetical protein ARALYDRAFT_473532 [Arabidopsis lyrata subsp.
lyrata]
gi|297339624|gb|EFH70041.1| hypothetical protein ARALYDRAFT_473532 [Arabidopsis lyrata subsp.
lyrata]
Length = 325
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 144/233 (61%), Gaps = 20/233 (8%)
Query: 68 IDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLI 127
++ADWR FRA L EQ + + + +P +G KWAH I PE GC+L+
Sbjct: 95 LNADWREFRANLFMKEQEEKAEAEGNESEP-----------IGLKWAHPIPFPETGCVLV 143
Query: 128 ATEKLDGVHIFERTVILIL---SMEPM-GPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
ATEKLDG F RTV+L+L + P GP G+++NRP +IK M+ST + A TFS+
Sbjct: 144 ATEKLDGYRTFARTVVLLLRAGTRHPQEGPFGVVINRPLHKNIKHMKSTKTELATTFSEC 203
Query: 184 PLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPE 243
L+FGGPLE +FL+ GD+ G FE+VM GL FGT+ ++ AA +VKR + P+
Sbjct: 204 SLYFGGPLEASMFLLKT---GDKTKIPG-FEEVMPGLNFGTRNSLDEAAVLVKRGILKPQ 259
Query: 244 DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
+FRFF G GW+ +QL EEI + YW VAACS +I + + LWEE+L LMG
Sbjct: 260 EFRFFVGYAGWQLDQLREEIESDYWHVAACSSDLI-CGASSENLWEEILQLMG 311
>gi|356517824|ref|XP_003527586.1| PREDICTED: UPF0301 protein Plut_0637-like [Glycine max]
Length = 340
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 110/243 (45%), Positives = 141/243 (58%), Gaps = 23/243 (9%)
Query: 63 HHKPLIDADWRSFRARLVAAEQVIRPQVQEPSVDPDA---AVNYPPQNSLGDKWAHTIHE 119
HH L DWR FRA+L R +++E S D D P LG +WAH I
Sbjct: 98 HHTNL---DWREFRAKLY------RDELKEIS-DADTHNQGGTLPISKPLGAQWAHPIPV 147
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILS----MEPMGPSGIILNRPSLMSIKEMRSTVLD 175
PE GC+L+ATEKLDGV FERTVIL+L GP GI++NRP IK M+ T D
Sbjct: 148 PETGCVLVATEKLDGVRTFERTVILLLRSGTRHHQGGPFGIVINRPLHKKIKHMKPTNHD 207
Query: 176 AAGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
TFSD L FGGPLE + L+ +E K FE+V+ GL FG++ ++ AA +V
Sbjct: 208 LLTTFSDCSLHFGGPLEASMVLLKT----EEKMKLPGFEEVIPGLCFGSRNSLDDAAGLV 263
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI--GLESGTLGLWEELLW 293
K+ + P DFRFF G GW+ +QL +EI + YW VAACS S++ L + LWEE+L
Sbjct: 264 KKGILKPHDFRFFVGYAGWQLDQLRDEIESDYWYVAACSSSLLCGALSDSSESLWEEILQ 323
Query: 294 LMG 296
LMG
Sbjct: 324 LMG 326
>gi|388501874|gb|AFK39003.1| unknown [Lotus japonicus]
Length = 350
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 114/246 (46%), Positives = 144/246 (58%), Gaps = 22/246 (8%)
Query: 59 PSDDHHKPLIDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNS--LGDKWAHT 116
P HH L DWR FRA+L R +++E S D DA NS LG KWAH
Sbjct: 105 PEKCHHTNL---DWREFRAKL------FRDELKEIS-DTDAHQGGTLHNSKPLGTKWAHP 154
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILIL---SMEPM-GPSGIILNRPSLMSIKEMRST 172
I PE GC+L+ATEKLDGV FERTV+L+L + P GP GI++NRP IK M+ T
Sbjct: 155 IPVPETGCVLVATEKLDGVRTFERTVVLLLRSGTRHPQEGPFGIVINRPLHKKIKHMKPT 214
Query: 173 VLDAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAA 232
D TFSD L FGGPLE +FL+ K G E K E+V+ GL FG + ++ AA
Sbjct: 215 NHDLLTTFSDCSLHFGGPLEASMFLL--KTG--EKSKLPGLEEVIPGLCFGARNSLDSAA 270
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI--GLESGTLGLWEE 290
+VK+ + P D FF G GW+ +QL +EI + YW VAACS S++ L + LWEE
Sbjct: 271 ALVKKGILRPHDCSFFVGYAGWQMDQLRDEIESNYWHVAACSSSLLCGALSDPSESLWEE 330
Query: 291 LLWLMG 296
+L LMG
Sbjct: 331 ILQLMG 336
>gi|358248446|ref|NP_001239883.1| uncharacterized protein LOC100783151 [Glycine max]
gi|255636262|gb|ACU18471.1| unknown [Glycine max]
Length = 340
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/243 (44%), Positives = 141/243 (58%), Gaps = 23/243 (9%)
Query: 63 HHKPLIDADWRSFRARLVAAEQVIRPQVQEPSVDPD---AAVNYPPQNSLGDKWAHTIHE 119
HH L DWR FRA+L R +++E S D D P LG +WAH I
Sbjct: 98 HHTNL---DWREFRAKLY------RDELKEIS-DADMHNQGGTLPNSKPLGTQWAHPIPV 147
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILS----MEPMGPSGIILNRPSLMSIKEMRSTVLD 175
PE GC+L+ATEKLDG+ FERTVIL+L GP GI++NRP IK ++ T D
Sbjct: 148 PEAGCVLVATEKLDGIRTFERTVILLLRSGTRHHQGGPFGIVINRPLHKKIKHLKPTNHD 207
Query: 176 AAGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
TFSD L FGGPLE + L+ +E K FE+V+ GL FG++ ++ AA +V
Sbjct: 208 LLTTFSDCSLHFGGPLEASMVLLKT----EEKMKLPGFEEVIPGLCFGSRNSLDDAAGLV 263
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI--GLESGTLGLWEELLW 293
K+ + P DFRFF G GW+ +QL +EI + YW VAACS S++ L + LWEE+L
Sbjct: 264 KKGILKPHDFRFFVGYAGWQLDQLRDEIESDYWYVAACSSSLLCGALSDPSESLWEEILQ 323
Query: 294 LMG 296
LMG
Sbjct: 324 LMG 326
>gi|357455437|ref|XP_003597999.1| hypothetical protein MTR_3g005140 [Medicago truncatula]
gi|355487047|gb|AES68250.1| hypothetical protein MTR_3g005140 [Medicago truncatula]
Length = 322
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/235 (42%), Positives = 140/235 (59%), Gaps = 14/235 (5%)
Query: 68 IDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLI 127
++ DWR FRA+L E ++ + + + + L KWAH I PE GC+L+
Sbjct: 93 VNLDWREFRAKLYRDEL---KEIADADTHKEGGALHISK-PLETKWAHPIPVPETGCVLV 148
Query: 128 ATEKLDGVHIFERTVILIL---SMEPM-GPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
AT+KLDG+ FERTVIL+L + P GP GI++NRP IK+M D TFSD
Sbjct: 149 ATDKLDGIRTFERTVILLLRSGTRHPQEGPFGIVINRPLHKKIKQMNPKNHDLVTTFSDC 208
Query: 184 PLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPE 243
L FGGPLE +FL+ G+++ G FE+V+ GLY+G + + AA +VK+ + P
Sbjct: 209 SLHFGGPLEASMFLLK---SGEKLKLPG-FEEVVPGLYYGARNCLDDAAGLVKKGIIKPH 264
Query: 244 DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI--GLESGTLGLWEELLWLMG 296
DF FF G GW+ +QL +EI + YW VAACS S++ L + GLWEE+L LMG
Sbjct: 265 DFSFFVGYAGWQMDQLRDEIESEYWYVAACSSSLLYKALTDSSEGLWEEILQLMG 319
>gi|9665092|gb|AAF97283.1|AC010164_5 Unknown protein [Arabidopsis thaliana]
Length = 341
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 142/233 (60%), Gaps = 20/233 (8%)
Query: 68 IDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLI 127
++ DWR FRA L EQ + + + +P +G KWAH I PE GC+L+
Sbjct: 111 LNTDWREFRANLFMKEQEEKAEAEGHESEP-----------IGLKWAHPIPFPETGCVLV 159
Query: 128 ATEKLDGVHIFERTVILIL---SMEPM-GPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
ATEKLDG F RTV+L+L + P GP G+++NRP +IK M+ST + A TFS+
Sbjct: 160 ATEKLDGYRTFARTVVLLLRAGTRHPQEGPFGVVINRPLHKNIKHMKSTKTELATTFSEC 219
Query: 184 PLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPE 243
L+FGGPLE +FL+ GD+ G FE+VM GL FGT+ ++ AA +VK+ + P+
Sbjct: 220 SLYFGGPLEASMFLLK---TGDKTKIPG-FEEVMPGLNFGTRNSLDEAAVLVKKGVLKPQ 275
Query: 244 DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
+FRFF G GW+ +QL EEI + YW VAACS +I S LWEE+L LMG
Sbjct: 276 EFRFFVGYAGWQLDQLREEIESDYWHVAACSSDLICGASSE-NLWEEILQLMG 327
>gi|22329926|ref|NP_174638.2| uncharacterized protein [Arabidopsis thaliana]
gi|17065472|gb|AAL32890.1| Unknown protein [Arabidopsis thaliana]
gi|20148515|gb|AAM10148.1| unknown protein [Arabidopsis thaliana]
gi|332193502|gb|AEE31623.1| uncharacterized protein [Arabidopsis thaliana]
Length = 325
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/233 (44%), Positives = 143/233 (61%), Gaps = 20/233 (8%)
Query: 68 IDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLI 127
++ DWR FRA L EQ + + + +P +G KWAH I PE GC+L+
Sbjct: 95 LNTDWREFRANLFMKEQEEKAEAEGHESEP-----------IGLKWAHPIPFPETGCVLV 143
Query: 128 ATEKLDGVHIFERTVILIL---SMEPM-GPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
ATEKLDG F RTV+L+L + P GP G+++NRP +IK M+ST + A TFS+
Sbjct: 144 ATEKLDGYRTFARTVVLLLRAGTRHPQEGPFGVVINRPLHKNIKHMKSTKTELATTFSEC 203
Query: 184 PLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPE 243
L+FGGPLE +FL+ GD+ G FE+VM GL FGT+ ++ AA +VK+ + P+
Sbjct: 204 SLYFGGPLEASMFLLKT---GDKTKIPG-FEEVMPGLNFGTRNSLDEAAVLVKKGVLKPQ 259
Query: 244 DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
+FRFF G GW+ +QL EEI + YW VAACS +I + + LWEE+L LMG
Sbjct: 260 EFRFFVGYAGWQLDQLREEIESDYWHVAACSSDLI-CGASSENLWEEILQLMG 311
>gi|388504254|gb|AFK40193.1| unknown [Medicago truncatula]
Length = 322
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/235 (42%), Positives = 140/235 (59%), Gaps = 14/235 (5%)
Query: 68 IDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLI 127
++ DWR FRA+L E ++ + + + + L KWAH I PE GC+L+
Sbjct: 93 VNLDWREFRAKLYRDEL---KEIADADTHKEGGALHISK-PLETKWAHPIPVPETGCVLV 148
Query: 128 ATEKLDGVHIFERTVILIL---SMEPM-GPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
AT+KLDG+ FERTVIL+L + P GP GI++NRP IK+M D TFSD
Sbjct: 149 ATDKLDGIRTFERTVILLLRSGTRHPQEGPFGIVINRPLHKKIKQMNPKNHDLVTTFSDC 208
Query: 184 PLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPE 243
L FGGPLE +FL+ G+++ G FE+V+ GLY+G + + AA +VK+ + P
Sbjct: 209 SLHFGGPLEASMFLLK---SGEKLKLPG-FEEVVPGLYYGARNCLDDAAGLVKKGIIKPH 264
Query: 244 DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI--GLESGTLGLWEELLWLMG 296
DF FF G GW+ +QL +EI + YW VAACS S++ L + GLWEE+L LMG
Sbjct: 265 DFSFFVGYAGWQMDQLRDEIESEYWYVAACSSSLLYKALTDSSEGLWEEILQLMG 319
>gi|224136119|ref|XP_002327385.1| predicted protein [Populus trichocarpa]
gi|222835755|gb|EEE74190.1| predicted protein [Populus trichocarpa]
Length = 335
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 138/234 (58%), Gaps = 16/234 (6%)
Query: 68 IDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNS-LGDKWAHTIHEPEKGCLL 126
++ DWR FRA L A EQ ++ D + P ++ L KWAH I PE GC+L
Sbjct: 99 VNLDWREFRANLFAQEQA-----EKAESDAHSQTGTPQESKPLSLKWAHPIPVPETGCVL 153
Query: 127 IATEKLDGVHIFERTVILIL---SMEPM-GPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
+ATEKLDGV FERTV+L+L + P GP G+++NRP I+ M+ T ++ TF+D
Sbjct: 154 VATEKLDGVRTFERTVVLLLRSGTRHPQEGPFGVVVNRPLNKKIRHMKPTNMELETTFAD 213
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
L FGGPL+ +FL+ + K FE+V+ GL FG ++ A +V+ + P
Sbjct: 214 CSLNFGGPLDASMFLLKSR-----EKKIKEFEEVIPGLCFGAGNSLDEAGALVREGVLKP 268
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
+DFRFF G GW+ +QL EEI + YW VAACS ++I + LWEE+L LMG
Sbjct: 269 QDFRFFVGYAGWQLDQLREEIESDYWYVAACSSNLI-CGGSSESLWEEILQLMG 321
>gi|302786320|ref|XP_002974931.1| hypothetical protein SELMODRAFT_102585 [Selaginella moellendorffii]
gi|300157090|gb|EFJ23716.1| hypothetical protein SELMODRAFT_102585 [Selaginella moellendorffii]
Length = 272
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 136/233 (58%), Gaps = 17/233 (7%)
Query: 71 DWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQN---SLGDKWAHTIHEPEKGCLLI 127
DWR+FRARL+A E+ + Q Q + D A P+N SLG +WAH I +PE GC+LI
Sbjct: 34 DWRAFRARLIANERSVEEQDQPSTSDASKA----PENFAKSLGARWAHPILKPEAGCVLI 89
Query: 128 ATEKLDGVHIFERTVILILSMEPM----GPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
AT+KLD + IFERTVI++LS GP G+ILNRP +K++R A F +
Sbjct: 90 ATDKLDELSIFERTVIILLSAGSSKGNEGPFGLILNRPLPHVLKDIRPQDQALAEAFGES 149
Query: 184 PLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPE 243
+ FGGPL L L+ +G G +++V+ G+++ + E + A M+K A G E
Sbjct: 150 QVHFGGPLVSDLILLL-QGASARKG----YQEVVPGIFYSSAEGLDQAVSMIKDKASGAE 204
Query: 244 DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
DFRFF G GW QL E+ GYW VAACS ++ + LWEE+L LMG
Sbjct: 205 DFRFFFGYAGWAIGQLEREVEDGYWCVAACSTNLF-ISGSAANLWEEVLKLMG 256
>gi|302814533|ref|XP_002988950.1| hypothetical protein SELMODRAFT_128964 [Selaginella moellendorffii]
gi|300143287|gb|EFJ09979.1| hypothetical protein SELMODRAFT_128964 [Selaginella moellendorffii]
Length = 272
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 135/233 (57%), Gaps = 17/233 (7%)
Query: 71 DWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQN---SLGDKWAHTIHEPEKGCLLI 127
DWR+FRARL+A E+ I Q Q + D A P+N SLG WAH I +PE GC+LI
Sbjct: 34 DWRAFRARLIANERSIEEQDQPSTSDASKA----PENFAKSLGACWAHPILKPEAGCVLI 89
Query: 128 ATEKLDGVHIFERTVILILSMEPM----GPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
AT+KLD + IFERTVI++LS GP G+ILNRP +K++R A F +
Sbjct: 90 ATDKLDELSIFERTVIILLSAGSSKGNEGPFGLILNRPLPHVLKDIRPQDQALAEAFGES 149
Query: 184 PLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPE 243
+ FGGPL L L+ +G G +++V+ G+++ + E + A M+K A G E
Sbjct: 150 QVHFGGPLVSDLILLL-QGASARKG----YQEVVPGIFYSSAEGLDQAVSMIKDKASGAE 204
Query: 244 DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
DFRFF G GW QL E+ GYW VAACS ++ + LWEE+L LMG
Sbjct: 205 DFRFFFGYAGWAIGQLEREVEDGYWCVAACSTNLF-ISGSAANLWEEVLKLMG 256
>gi|115463953|ref|NP_001055576.1| Os05g0420200 [Oryza sativa Japonica Group]
gi|53982670|gb|AAV25649.1| unknown protein [Oryza sativa Japonica Group]
gi|113579127|dbj|BAF17490.1| Os05g0420200 [Oryza sativa Japonica Group]
gi|222631631|gb|EEE63763.1| hypothetical protein OsJ_18583 [Oryza sativa Japonica Group]
Length = 352
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 127/236 (53%), Gaps = 22/236 (9%)
Query: 72 WRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYP-----PQNSLGDKWAHTIHEPEKGCLL 126
WR RA LV EQ E VDP A P + L KWAH I PE GC+L
Sbjct: 113 WRDVRANLVRREQ-------ELLVDPSAPAEQKTSSGEPAHQLPQKWAHPITMPEAGCVL 165
Query: 127 IATEKLDGVHIFERTVILILSMEPMG----PSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
+ATE LD IFERTVIL+L + G P G+ILNRP IK + + D A F D
Sbjct: 166 VATEVLDDDSIFERTVILLLRLGSRGTFDSPFGVILNRPLYTKIKNVNPSFQDQATPFGD 225
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
PLFFGGP++ +FLV G FE+V+ G+ FG + + AA ++K A+
Sbjct: 226 SPLFFGGPVDMSMFLVRASDNSRLKG----FEEVIPGIRFGFRTDLEKAAVLMKSGAIKS 281
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI--GLESGTLGLWEELLWLMG 296
+D RFF G W+ EQL EIRAGYW VA+CS +I L LW E+L LMG
Sbjct: 282 QDLRFFVGHAAWDYEQLLSEIRAGYWAVASCSTELISDALTGDPSCLWTEILQLMG 337
>gi|218196819|gb|EEC79246.1| hypothetical protein OsI_20004 [Oryza sativa Indica Group]
Length = 352
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 127/236 (53%), Gaps = 22/236 (9%)
Query: 72 WRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYP-----PQNSLGDKWAHTIHEPEKGCLL 126
WR RA LV EQ E VDP A P + L KWAH I PE GC+L
Sbjct: 113 WRDVRANLVRREQ-------ELLVDPSAPAEQKTSSGEPAHQLPQKWAHPITMPEAGCVL 165
Query: 127 IATEKLDGVHIFERTVILILSMEPMG----PSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
+ATE LD IFERTVIL+L + G P G+ILNRP IK + + D A F D
Sbjct: 166 VATEVLDDDSIFERTVILLLRLGSRGTFDGPFGVILNRPLYTKIKNVNPSFQDQATPFGD 225
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
PLFFGGP++ +FLV G FE+V+ G+ FG + + AA ++K A+
Sbjct: 226 SPLFFGGPVDMSMFLVRASDNSRLKG----FEEVIPGIRFGFRTDLEKAAVLMKSGAIKS 281
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI--GLESGTLGLWEELLWLMG 296
+D RFF G W+ EQL EIRAGYW VA+CS +I L LW E+L LMG
Sbjct: 282 QDLRFFVGHAAWDYEQLLSEIRAGYWAVASCSTELISDALTGDPSCLWTEILQLMG 337
>gi|242087971|ref|XP_002439818.1| hypothetical protein SORBIDRAFT_09g020680 [Sorghum bicolor]
gi|241945103|gb|EES18248.1| hypothetical protein SORBIDRAFT_09g020680 [Sorghum bicolor]
Length = 355
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/235 (42%), Positives = 127/235 (54%), Gaps = 21/235 (8%)
Query: 72 WRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQN----SLGDKWAHTIHEPEKGCLLI 127
WR RA LV EQ E VDP P + L KWAH I PE GC+L+
Sbjct: 117 WRDVRANLVRREQ-------ELLVDPSTPTESKPSSGDPLQLPQKWAHAITMPEAGCVLV 169
Query: 128 ATEKLDGVHIFERTVILILSMEPMG----PSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
ATE LD IFERTVI IL + G P G+ILNRP IK + T D A F D
Sbjct: 170 ATEALDDDSIFERTVIFILRLGSRGTFDGPFGVILNRPLYTKIKHVNPTFQDQATPFGDS 229
Query: 184 PLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPE 243
PLFFGGP++ +FLV D+ + FE+V+ G+ +G + + AA ++K A+ +
Sbjct: 230 PLFFGGPVDMSMFLVR----TDDSSRLKGFEEVVPGICYGFRTDLEKAAVLMKSGAIRTQ 285
Query: 244 DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI--GLESGTLGLWEELLWLMG 296
D RF+ G W+ EQL EIRAGYW VA+CS +I L LW E+L LMG
Sbjct: 286 DLRFYVGHAAWDYEQLLGEIRAGYWAVASCSTELISDALTGDPSCLWTEILQLMG 340
>gi|226531830|ref|NP_001140403.1| uncharacterized protein LOC100272457 [Zea mays]
gi|194699350|gb|ACF83759.1| unknown [Zea mays]
Length = 338
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 126/231 (54%), Gaps = 13/231 (5%)
Query: 72 WRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATEK 131
WR RA LV EQ + + +PS ++ + L KWAH I PE GC+L+ATE
Sbjct: 114 WRDVRANLVRREQEL---LVDPSTPSESKASSGDPLQLPQKWAHAITMPEAGCVLVATEA 170
Query: 132 LDGVHIFERTVILILSMEPMG----PSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFF 187
LD IFERTVI +L + G P G+I+NRP IK + D A F D PLFF
Sbjct: 171 LDDDSIFERTVIFLLRLGTRGTFDGPFGVIMNRPLYTKIKHVNPMFRDQATPFGDSPLFF 230
Query: 188 GGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRF 247
GGP++ +FLV + G FE+V+ G+ +G + + AA ++ A+ +D RF
Sbjct: 231 GGPVDMSMFLVRTEDSARLKG----FEEVVPGICYGFRTDLEKAAALMNSGAIRTQDLRF 286
Query: 248 FDGCCGWEKEQLNEEIRAGYWTVAACSPSVIG--LESGTLGLWEELLWLMG 296
+ G W+ EQL EIRAGYW VA+CS +IG L LW E+ LMG
Sbjct: 287 YVGHAAWDHEQLLGEIRAGYWAVASCSTELIGDALMGDPSRLWTEIQLLMG 337
>gi|413949262|gb|AFW81911.1| hypothetical protein ZEAMMB73_305589 [Zea mays]
Length = 338
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 126/231 (54%), Gaps = 13/231 (5%)
Query: 72 WRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATEK 131
WR RA LV EQ + + +PS ++ + L KWAH I PE GC+L+ATE
Sbjct: 114 WRDVRANLVRREQEL---LVDPSTPSESKASSGDPLQLPQKWAHAITMPEAGCVLVATEA 170
Query: 132 LDGVHIFERTVILILSMEPMG----PSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFF 187
LD IFERTVI +L + G P G+I+NRP IK + D A F D PLFF
Sbjct: 171 LDDDSIFERTVIFLLRLGTRGTFDGPFGVIMNRPLYTKIKHVNPMFRDQATPFGDSPLFF 230
Query: 188 GGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRF 247
GGP++ +FLV + G FE+V+ G+ +G + + AA ++ A+ +D RF
Sbjct: 231 GGPVDMSMFLVRTEDSARLKG----FEEVVPGICYGFRTDLEKAAALMNSGAIRTQDLRF 286
Query: 248 FDGCCGWEKEQLNEEIRAGYWTVAACSPSVIG--LESGTLGLWEELLWLMG 296
+ G W+ EQL EIRAGYW VA+CS +IG L LW E+ LMG
Sbjct: 287 YVGHAAWDHEQLLGEIRAGYWAVASCSTELIGDALMGDPSRLWTEIQQLMG 337
>gi|357126238|ref|XP_003564795.1| PREDICTED: uncharacterized protein LOC100828069 [Brachypodium
distachyon]
Length = 359
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/238 (41%), Positives = 128/238 (53%), Gaps = 28/238 (11%)
Query: 72 WRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNS-------LGDKWAHTIHEPEKGC 124
WR RA V + E +VD VN PQ S L KWAH+I PE GC
Sbjct: 121 WRDVRASFVIPKS-------EQTVD----VNTLPQTSSDGPVHCLPRKWAHSISAPESGC 169
Query: 125 LLIATEKLDGVHIFERTVILILSMEPM----GPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
+L+ATE+LDG FERTVIL+L + GP G+ILNRP +K + + D A F
Sbjct: 170 VLVATEELDGNGTFERTVILLLKLGSKDAYDGPFGVILNRPLYTKMKHVNPSFRDPATPF 229
Query: 181 SDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
SD LFFGGP++ +FL+ G G FE+V G+ FG + + A ++K AV
Sbjct: 230 SDCSLFFGGPVDMSIFLMRTNEGRPIKG----FEEVAPGICFGFRTDLQKAGHLMKNGAV 285
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI--GLESGTLGLWEELLWLMG 296
PED +F+ G W+ +QL EI AGYW V +CS +I L + LW E+L LMG
Sbjct: 286 NPEDLKFYVGYSAWDHDQLLSEIDAGYWVVTSCSSGLITDALTTDPSCLWSEILQLMG 343
>gi|326516448|dbj|BAJ92379.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 359
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 127/232 (54%), Gaps = 13/232 (5%)
Query: 72 WRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATEK 131
WR RA LV EQ + P+ ++ P Q L KWAH I PE GC+L+ATE
Sbjct: 119 WRDVRANLVRREQELLVDPSVPAESKASSGEAPHQ--LPQKWAHPITMPEAGCVLVATEV 176
Query: 132 LDGVHIFERTVILILSMEPMG----PSGIILNRPSLMSIKEMR-STVLDAAGTFSDRPLF 186
LD +FERTVIL+L + G P G+ILNRP IK + S+ D F D LF
Sbjct: 177 LDDDSVFERTVILLLRLGSRGTFDGPFGVILNRPLYTKIKNVNPSSFQDQTTPFGDCALF 236
Query: 187 FGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFR 246
FGGP++ +FLV K G FE+V+ G+ FG + + A ++K A+ ED R
Sbjct: 237 FGGPVDMSMFLVRTKDSSRLKG----FEEVIPGICFGFRTELEKAGVLMKSGAIKTEDLR 292
Query: 247 FFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI--GLESGTLGLWEELLWLMG 296
FF G W+ EQL EIRAGYW VA+CS +I + S LW E+L LMG
Sbjct: 293 FFVGHAAWDYEQLLSEIRAGYWAVASCSTELISDAVSSDPSCLWTEILQLMG 344
>gi|357133632|ref|XP_003568428.1| PREDICTED: uncharacterized protein LOC100827575 [Brachypodium
distachyon]
Length = 354
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 127/232 (54%), Gaps = 13/232 (5%)
Query: 72 WRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATEK 131
WR RA LV EQ + P+ ++ PQ L +WAH I PE GC+L+ATE
Sbjct: 114 WRDVRANLVRREQELLVDSSAPAESKASSGESVPQ--LPQRWAHPITMPEAGCVLVATEV 171
Query: 132 LDGVHIFERTVILILSMEPMG----PSGIILNRPSLMSIKEMR-STVLDAAGTFSDRPLF 186
LD IFERTVIL+L + G P G+ILNRP IK + S+ D F D LF
Sbjct: 172 LDDDSIFERTVILLLRLGSRGTFDGPFGVILNRPLYTKIKNVNPSSFQDQTTPFGDCSLF 231
Query: 187 FGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFR 246
FGGP++ +FLV G FE+V+ G+ FG + + A ++K A+ +D R
Sbjct: 232 FGGPVDMSMFLVRTSDSSRLKG----FEEVIPGICFGFRTELEKAGVLMKSGAIRTQDLR 287
Query: 247 FFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIG--LESGTLGLWEELLWLMG 296
FF G W+ EQL EIRAGYW VA+CS +IG + + LW ++L LMG
Sbjct: 288 FFVGHAAWDYEQLLSEIRAGYWAVASCSTELIGDAVSTDPSCLWTDILQLMG 339
>gi|326518610|dbj|BAJ88334.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 315
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 120/218 (55%), Gaps = 16/218 (7%)
Query: 91 QEPSVDPDA-----AVNYPPQNSLGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILI 145
QE VDP A + + L KWAH I PE GC+L+ATE LD +FERTVIL+
Sbjct: 87 QELLVDPSVPAESKASSGEAPHQLPQKWAHPITMPEAGCVLVATEVLDDDSVFERTVILL 146
Query: 146 LSMEPMG----PSGIILNRPSLMSIKEMR-STVLDAAGTFSDRPLFFGGPLEEGLFLVSP 200
L + G P G+ILNRP IK + S+ D F D LFFGGP++ +FLV
Sbjct: 147 LRLGSRGTFDGPFGVILNRPLYTKIKNVNPSSFQDQTTPFGDCALFFGGPVDMSMFLVRT 206
Query: 201 KGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLN 260
K G FE+V+ G+ FG + + A ++K A+ ED RFF G W+ EQL
Sbjct: 207 KDSSRLKG----FEEVIPGICFGFRTELEKAGVLMKSGAIKTEDLRFFVGHAAWDYEQLL 262
Query: 261 EEIRAGYWTVAACSPSVI--GLESGTLGLWEELLWLMG 296
EIRAGYW VA+CS +I + S LW E+L LMG
Sbjct: 263 SEIRAGYWAVASCSTELISDAVSSDPSCLWTEILQLMG 300
>gi|219362675|ref|NP_001136537.1| uncharacterized protein LOC100216654 [Zea mays]
gi|194696062|gb|ACF82115.1| unknown [Zea mays]
gi|413951703|gb|AFW84352.1| hypothetical protein ZEAMMB73_903653 [Zea mays]
Length = 351
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 130/246 (52%), Gaps = 19/246 (7%)
Query: 60 SDDHHKPLIDADWRSFRARLV--AAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTI 117
SD + P + WR RA V EQ + + AA P KWAH+I
Sbjct: 101 SDTMYIPSNLSYWRDVRASFVIPKLEQTLDANSPVQTGQDGAAYRLP------RKWAHSI 154
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPM----GPSGIILNRPSLMSIKEMRSTV 173
PE GC+L+ATE+LDG FERTVIL+L + GP GIILNRP ++ + ++
Sbjct: 155 PMPESGCVLVATEELDGNGTFERTVILLLRLGSRDAYDGPFGIILNRPLYTKMRHVNPSL 214
Query: 174 LDAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
D A F D L FGGP++ +FL+S G G FE+V+ G+ FG + + A
Sbjct: 215 GDQATPFVDCSLLFGGPVDMSIFLMSAGDGRPIKG----FEEVVPGICFGFRTDLEKAGA 270
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLG---LWEE 290
++K+ AV PED +F+ G W+ +QL EI AGYW V +CS +I T LW E
Sbjct: 271 LIKKGAVKPEDLKFYVGYSAWDHDQLLSEIDAGYWVVTSCSTGLIADALTTTDPSCLWTE 330
Query: 291 LLWLMG 296
+L LMG
Sbjct: 331 VLQLMG 336
>gi|413951704|gb|AFW84353.1| hypothetical protein ZEAMMB73_903653 [Zea mays]
Length = 350
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 135/247 (54%), Gaps = 22/247 (8%)
Query: 60 SDDHHKPLIDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNS---LGDKWAHT 116
SD + P + WR RA V P++Q ++D ++ V + L KWAH+
Sbjct: 101 SDTMYIPSNLSYWRDVRASFVI------PKLQ--TLDANSPVQTGQDGAAYRLPRKWAHS 152
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPM----GPSGIILNRPSLMSIKEMRST 172
I PE GC+L+ATE+LDG FERTVIL+L + GP GIILNRP ++ + +
Sbjct: 153 IPMPESGCVLVATEELDGNGTFERTVILLLRLGSRDAYDGPFGIILNRPLYTKMRHVNPS 212
Query: 173 VLDAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAA 232
+ D A F D L FGGP++ +FL+S G G FE+V+ G+ FG + + A
Sbjct: 213 LGDQATPFVDCSLLFGGPVDMSIFLMSAGDGRPIKG----FEEVVPGICFGFRTDLEKAG 268
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLG---LWE 289
++K+ AV PED +F+ G W+ +QL EI AGYW V +CS +I T LW
Sbjct: 269 ALIKKGAVKPEDLKFYVGYSAWDHDQLLSEIDAGYWVVTSCSTGLIADALTTTDPSCLWT 328
Query: 290 ELLWLMG 296
E+L LMG
Sbjct: 329 EVLQLMG 335
>gi|326492199|dbj|BAJ98324.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 351
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/250 (38%), Positives = 131/250 (52%), Gaps = 28/250 (11%)
Query: 60 SDDHHKPLIDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNS-------LGDK 112
SD + P + WR RA V + E +VD VN PQ S L K
Sbjct: 102 SDTMYVPSNLSYWRDVRASFVIPKS-------EQAVD----VNTIPQTSFDGPVHCLPRK 150
Query: 113 WAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPM----GPSGIILNRPSLMSIKE 168
WAH+I PE GC+L+ATE+LDG FERTVIL+L + GP G+ILNRP +K
Sbjct: 151 WAHSISAPESGCVLVATEELDGNGTFERTVILLLKLGSRDAYDGPFGVILNRPLYTKMKH 210
Query: 169 MRSTVLDAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETV 228
+ + D A F D LFFGGP++ +FL+ G G FE+V G+ FG + +
Sbjct: 211 VNPSFRDQAMPFGDCSLFFGGPVDMSIFLMRTNEGRPIKG----FEEVAPGVCFGFRTDL 266
Query: 229 GCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI--GLESGTLG 286
++K A+ PED +F+ G W+ +QL EI AGYW V +CS +I L +
Sbjct: 267 QKVGHLMKNGALNPEDLKFYVGYSAWDHDQLLSEIDAGYWVVTSCSSGLITDALMTDPSC 326
Query: 287 LWEELLWLMG 296
LW E+L +MG
Sbjct: 327 LWSEVLQMMG 336
>gi|115441495|ref|NP_001045027.1| Os01g0886000 [Oryza sativa Japonica Group]
gi|20161240|dbj|BAB90167.1| unknown protein [Oryza sativa Japonica Group]
gi|56785229|dbj|BAD82117.1| unknown protein [Oryza sativa Japonica Group]
gi|113534558|dbj|BAF06941.1| Os01g0886000 [Oryza sativa Japonica Group]
gi|125572897|gb|EAZ14412.1| hypothetical protein OsJ_04335 [Oryza sativa Japonica Group]
Length = 354
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 127/231 (54%), Gaps = 15/231 (6%)
Query: 72 WRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATEK 131
WR RA V V + Q + P AA + P + L KWAH+I PE GC+L+A E+
Sbjct: 118 WRDVRASFV----VPKVQTVDAHTLPQAATDAP-VHCLPRKWAHSIPMPESGCVLVAAEE 172
Query: 132 LDGVHIFERTVILILSMEPM----GPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFF 187
LDG FERTVIL+L + GP G+ILNRP +K + + + A FSD LFF
Sbjct: 173 LDGNGTFERTVILLLRLGSRDAYDGPFGVILNRPLYTKMKHVNPSFRNQATPFSDCSLFF 232
Query: 188 GGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRF 247
GGP++ +FL+ D+ G FE+V G+ FG + + A+ ++K AV PED F
Sbjct: 233 GGPVDMSIFLMRTT---DDRPIKG-FEEVSPGVCFGFRTDLEKASALLKSGAVKPEDLNF 288
Query: 248 FDGCCGWEKEQLNEEIRAGYWTVAACSPSVI--GLESGTLGLWEELLWLMG 296
+ G W+ +QL EI GYW V +CS +I L + LW E+L LMG
Sbjct: 289 YVGYSAWDYDQLLSEIDQGYWHVTSCSSGLISDSLATDPSCLWTEILKLMG 339
>gi|125528635|gb|EAY76749.1| hypothetical protein OsI_04705 [Oryza sativa Indica Group]
Length = 354
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 127/231 (54%), Gaps = 15/231 (6%)
Query: 72 WRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATEK 131
WR RA V V + Q + P AA + P + L KWAH+I PE GC+L+A E+
Sbjct: 118 WRDVRASFV----VPKVQTVDAHTLPQAATDAP-VHCLPRKWAHSIPMPESGCVLVAAEE 172
Query: 132 LDGVHIFERTVILILSMEPM----GPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFF 187
LDG FERTVIL+L + GP G+ILNRP +K + + + A FSD LFF
Sbjct: 173 LDGNGTFERTVILLLRLGSRDAYDGPFGVILNRPLYTKMKHVNPSFRNQATPFSDCSLFF 232
Query: 188 GGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRF 247
GGP++ +FL+ D+ G FE+V G+ FG + + A+ ++K AV PED F
Sbjct: 233 GGPVDMSIFLMRTT---DDRPIKG-FEEVSPGVCFGFRTDLEKASALLKSGAVKPEDLNF 288
Query: 248 FDGCCGWEKEQLNEEIRAGYWTVAACSPSVI--GLESGTLGLWEELLWLMG 296
+ G W+ +QL EI GYW V +CS +I L + LW E+L LMG
Sbjct: 289 YVGYSAWDYDQLLSEIDQGYWHVTSCSSGLISDSLATDPSCLWTEILKLMG 339
>gi|242059467|ref|XP_002458879.1| hypothetical protein SORBIDRAFT_03g042070 [Sorghum bicolor]
gi|241930854|gb|EES03999.1| hypothetical protein SORBIDRAFT_03g042070 [Sorghum bicolor]
Length = 351
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 131/245 (53%), Gaps = 18/245 (7%)
Query: 60 SDDHHKPLIDADWRSFRARLVAA--EQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTI 117
SD + P + WR RA V EQ + + + D +V + P+ KWAH+I
Sbjct: 102 SDTMYIPSNLSYWRDVRASFVIPKLEQTVDANSPQQTAQ-DGSVYHLPR-----KWAHSI 155
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPM----GPSGIILNRPSLMSIKEMRSTV 173
PE GC+L+ATE+LDG FERTVIL+L + GP G+ILNRP +K + +
Sbjct: 156 PMPESGCVLVATEELDGNGTFERTVILLLRLGSRDAYDGPFGVILNRPLYTKMKHVNPSF 215
Query: 174 LDAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
+ A F D L FGGP++ +FL+ G G FE+V+ G+ FG + + A+
Sbjct: 216 GEQATPFGDCSLLFGGPVDMSIFLMRMTEGRPIKG----FEEVVPGICFGFRTDLEKASA 271
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI--GLESGTLGLWEEL 291
++K V PED +F+ G WE +QL EI AGYW V +CS +I L LW E+
Sbjct: 272 LMKNGTVNPEDLKFYVGYSAWEHDQLLSEIDAGYWVVTSCSSGLITDALTMDPSCLWTEI 331
Query: 292 LWLMG 296
L LMG
Sbjct: 332 LQLMG 336
>gi|413951706|gb|AFW84355.1| hypothetical protein ZEAMMB73_903653 [Zea mays]
Length = 196
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 107/184 (58%), Gaps = 11/184 (5%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPM----GPSGIILNRPSLMSIKEMRSTVLD 175
PE GC+L+ATE+LDG FERTVIL+L + GP GIILNRP ++ + ++ D
Sbjct: 2 PESGCVLVATEELDGNGTFERTVILLLRLGSRDAYDGPFGIILNRPLYTKMRHVNPSLGD 61
Query: 176 AAGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
A F D L FGGP++ +FL+S G G FE+V+ G+ FG + + A ++
Sbjct: 62 QATPFVDCSLLFGGPVDMSIFLMSAGDGRPIKG----FEEVVPGICFGFRTDLEKAGALI 117
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLG---LWEELL 292
K+ AV PED +F+ G W+ +QL EI AGYW V +CS +I T LW E+L
Sbjct: 118 KKGAVKPEDLKFYVGYSAWDHDQLLSEIDAGYWVVTSCSTGLIADALTTTDPSCLWTEVL 177
Query: 293 WLMG 296
LMG
Sbjct: 178 QLMG 181
>gi|414870856|tpg|DAA49413.1| TPA: hypothetical protein ZEAMMB73_561333 [Zea mays]
Length = 143
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 78/120 (65%), Gaps = 13/120 (10%)
Query: 74 SFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATEKLD 133
SFRA+L EQ P V ++ P + D+WAH + +PEKGCLLIATEKLD
Sbjct: 30 SFRAQLYFKEQHGDPPVA-------SSTQLPAVQTGSDRWAHPLMKPEKGCLLIATEKLD 82
Query: 134 GVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV----LDAAGTFSDRPLFFGG 189
G HIFERTVIL+LS +GP G+ILNRPSLMSIKE ++ D A F+ RPLFFGG
Sbjct: 83 GSHIFERTVILLLS--SLGPDGVILNRPSLMSIKEASGSICADDADIACAFAGRPLFFGG 140
>gi|255077454|ref|XP_002502367.1| predicted protein [Micromonas sp. RCC299]
gi|226517632|gb|ACO63625.1| predicted protein [Micromonas sp. RCC299]
Length = 369
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 125/256 (48%), Gaps = 27/256 (10%)
Query: 54 LESSLPSDDHHKPLIDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYP--------- 104
+E + DD P ++ DWR FRA L++ E+ V + + AA + P
Sbjct: 110 VEKAPALDDDVAPALEGDWRDFRAMLISQEKGKDELVDDDEI---AAASGPNLELLRKQN 166
Query: 105 PQNSLGDKWAHTIHEPEKGCLLIAT--EKLDGVHIFERTVILILSMEPMGPSGIILNRPS 162
P+ + WAH I PEKGCLL+A E G F + VIL+L G G+ILNRP+
Sbjct: 167 PKLAKDKPWAHRIGAPEKGCLLLAAADEFTLGQQYFHQAVILLLEHHDKGSMGVILNRPT 226
Query: 163 LMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYF 222
++ + + G F++ L+FGG + +G VS G D+V S +V+ G+Y
Sbjct: 227 QYNMGYVSGQ---SDGPFAENALYFGGDVGDGT--VSFLHGSDKVQGSA---EVLPGVYL 278
Query: 223 GTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLES 282
G ++ A E+VK+ V +F+FF CGW QL E G W ACS + +
Sbjct: 279 GGYDS---ACELVKKEEVDANEFKFFARYCGWAPGQLKRECERGVWYPVACSKQLALKQV 335
Query: 283 GTL--GLWEELLWLMG 296
L LW E+L L G
Sbjct: 336 IQLPKPLWREILELCG 351
>gi|307107666|gb|EFN55908.1| hypothetical protein CHLNCDRAFT_57791 [Chlorella variabilis]
Length = 849
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 112/219 (51%), Gaps = 23/219 (10%)
Query: 61 DDHHKPLIDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEP 120
D P++ DWR+FRARLVA E AA Q ++WAH + +P
Sbjct: 90 DMDMPPVLVQDWRAFRARLVAME------------SGQAARAASLQLGREERWAHVLAQP 137
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPM-GPSGIILNRPSLMSIKEMRSTVLDAAGT 179
E+GCLL+A + G+ +F TVIL+L + G SG+++N P+ + I + D A
Sbjct: 138 ERGCLLVARPR-PGLGMFANTVILLLEHDDREGSSGLVINMPTPLLISNL-GLEEDIADA 195
Query: 180 FSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
F PLF GGP+ + L V E G E ++EG++ G E+ A+E+V+R
Sbjct: 196 FRQCPLFIGGPVTKNLLHVLHARRDVE----GALE-IIEGVFAGGVES---ASELVRRGE 247
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
P+DF G GW QL +E+R+G W A S +VI
Sbjct: 248 ASPKDFMLLSGYSGWGPGQLQQELRSGTWIPVAASQAVI 286
>gi|303275544|ref|XP_003057066.1| predicted protein [Micromonas pusilla CCMP1545]
gi|303280127|ref|XP_003059356.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459192|gb|EEH56488.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461418|gb|EEH58711.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 363
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 122/262 (46%), Gaps = 41/262 (15%)
Query: 58 LPS-DDHHKPLIDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAV--------------N 102
LP+ +D P ++ DWR FRA+LV +E P D A
Sbjct: 104 LPTPEDDVAPALEGDWRDFRAKLVNSESA---GSDAPGASADEAARVEAASGENIKLLST 160
Query: 103 YPPQNSLGDKWAHTIHEPEKGCLLIATE---KLDGVHIFERTVILILSMEPMGPSGIILN 159
P+ + WAH I PEKGCLL+A+E KL G F + VIL+L G G+ILN
Sbjct: 161 QNPELASETPWAHVIGAPEKGCLLLASEEEFKL-GQQYFHQAVILVLEHHEKGSMGVILN 219
Query: 160 RPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEG 219
RP+ ++ + D + F++ L+FGG + +G VS G EV +V+ G
Sbjct: 220 RPTQYNMGYVGG---DDSSPFANNQLYFGGDVGDGT--VSFLHGSSEVAGGS---EVLPG 271
Query: 220 LYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACS----- 274
+Y G ++ A E+VK + P DF+FF CGW QL E G W ACS
Sbjct: 272 VYLGGYDS---ACELVKDGTLKPTDFKFFARYCGWAPGQLESECERGVWYPVACSRQLAL 328
Query: 275 PSVIGLESGTLGLWEELLWLMG 296
VI L LW E++ L G
Sbjct: 329 KQVIQLPK---PLWREVMELCG 347
>gi|308810409|ref|XP_003082513.1| unnamed protein product [Ostreococcus tauri]
gi|116060982|emb|CAL56370.1| unnamed protein product [Ostreococcus tauri]
Length = 270
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 125/252 (49%), Gaps = 20/252 (7%)
Query: 54 LESSLPSDDHHKPLIDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQN---SLG 110
+E D P +++DWR FRARL+A E+ P+ + ++ + QN +
Sbjct: 1 MEDGRGDGDDVAPALESDWREFRARLLAREREATPEERASAISEENMKVLEAQNPRLAQA 60
Query: 111 DKWAHTIHEPEKGCLLIATEK--LDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE 168
WAH I PEKGCLL+A ++ F + VIL+L G GIILNRP+ +
Sbjct: 61 KPWAHVIAAPEKGCLLVAADQEFRMSQQYFHQAVILVLEHHENGSMGIILNRPTQYN--- 117
Query: 169 MRSTVLDAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETV 228
M + +G F++ L+FGG + +G VS G ++V S +V+ G+Y G E+
Sbjct: 118 MGYVSGEPSGPFAENALYFGGDVGDG--TVSFLHGREDVKGS---VEVLPGVYLGGYES- 171
Query: 229 GCAAEMVKRNA--VGPEDFRFFDGCCGWEKEQLNEEIRAGYW--TVAACSPSVIGLESGT 284
A E+V+++ P++F+FF CGW QL E G W AA S+ +
Sbjct: 172 --ACELVQQDGSTCHPDEFKFFARYCGWAPGQLESECERGVWYPIAAAKELSLKQVIQLP 229
Query: 285 LGLWEELLWLMG 296
LW E+L L G
Sbjct: 230 KPLWREILELCG 241
>gi|302842759|ref|XP_002952922.1| hypothetical protein VOLCADRAFT_93661 [Volvox carteri f.
nagariensis]
gi|300261633|gb|EFJ45844.1| hypothetical protein VOLCADRAFT_93661 [Volvox carteri f.
nagariensis]
Length = 818
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 128/276 (46%), Gaps = 32/276 (11%)
Query: 12 NKTTELVPVSKARVVSYTKRNHNLIHFHCKRVGFSSSITCCHLESSLPSDDHHKPLIDAD 71
+ +TE P S ++ N+ G C L P+ D + D
Sbjct: 390 STSTESRPSFMRPTASSCAKSRNVTAVAADLAGHEEGFKACGLPQGFPTPD----ITGQD 445
Query: 72 WRSFRARLVAAEQVIR------PQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCL 125
WR+FRA LVA E R Q+Q P YPP S G WAH + EPE GCL
Sbjct: 446 WRAFRAHLVAWEHSARRAAERSSQLQRPP--------YPPLVS-GKSWAHPLAEPEAGCL 496
Query: 126 LIATEKLDGVHIFERTVILILSMEP-MGPSGIILNRPSLMSIKEMR--STVLDAAGTFSD 182
L+A + D + + +VILI S +P +G G +LN+P+ +++ E++ +V F
Sbjct: 497 LLARQ--DNMSWYTGSVILIASHDPRVGSVGYVLNKPANLTLGELKLLESVPGFQEAFGS 554
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
+ + GGPL +L VG G +++ EG+Y G + A +V + P
Sbjct: 555 QRMQLGGPL----YLDRVALLHRLVGLRGS-QKIAEGMYMGG---LPDAIRLVTAGVLRP 606
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+DF G CGW QL +E+ AG+W + + SP ++
Sbjct: 607 QDFTLVLGMCGWRPGQLVDEVAAGWWHLISASPDLV 642
>gi|297744575|emb|CBI37837.3| unnamed protein product [Vitis vinifera]
Length = 222
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 79/135 (58%), Gaps = 8/135 (5%)
Query: 68 IDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLI 127
I DWR FRA L A EQ + +P P+ LG KWAH PE GC+++
Sbjct: 53 IIVDWREFRAALFAREQA---EKADPEAHSQGGTPQEPK-PLGLKWAHPFPVPETGCVIV 108
Query: 128 ATEKLDGVHIFERTVILIL---SMEP-MGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
ATEKLDGV FERTV+L+L + P GP G+++NRP I M+ T L+ A TF+D
Sbjct: 109 ATEKLDGVRSFERTVVLLLRSGTRHPQQGPFGVVINRPLHKKINYMKPTNLELATTFADC 168
Query: 184 PLFFGGPLEEGLFLV 198
L FGGP+E +FL+
Sbjct: 169 SLHFGGPVEASMFLL 183
>gi|359474832|ref|XP_002278101.2| PREDICTED: uncharacterized protein LOC100245246 [Vitis vinifera]
Length = 329
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 79/135 (58%), Gaps = 8/135 (5%)
Query: 68 IDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLI 127
I DWR FRA L A EQ + +P P+ LG KWAH PE GC+++
Sbjct: 160 IIVDWREFRAALFAREQA---EKADPEAHSQGGTPQEPK-PLGLKWAHPFPVPETGCVIV 215
Query: 128 ATEKLDGVHIFERTVILIL---SMEP-MGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
ATEKLDGV FERTV+L+L + P GP G+++NRP I M+ T L+ A TF+D
Sbjct: 216 ATEKLDGVRSFERTVVLLLRSGTRHPQQGPFGVVINRPLHKKINYMKPTNLELATTFADC 275
Query: 184 PLFFGGPLEEGLFLV 198
L FGGP+E +FL+
Sbjct: 276 SLHFGGPVEASMFLL 290
>gi|217073272|gb|ACJ84995.1| unknown [Medicago truncatula]
Length = 129
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 79/126 (62%), Gaps = 6/126 (4%)
Query: 175 DAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
D TFSD L FGGPLE +FL+ G+++ G FE+V+ GLY+G + + AA +
Sbjct: 7 DLVTTFSDCSLHFGGPLEASMFLLKS---GEKLKLPG-FEEVVPGLYYGARNCLDDAAGL 62
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI--GLESGTLGLWEELL 292
VK+ + P DF FF G GW+ +QL +EI + YW VAACS S++ L + GLWEE+L
Sbjct: 63 VKKGIIKPHDFSFFVGYAGWQMDQLRDEIESEYWYVAACSSSLLYKALTDSSEGLWEEIL 122
Query: 293 WLMGRR 298
LMG +
Sbjct: 123 QLMGTQ 128
>gi|147789808|emb|CAN71763.1| hypothetical protein VITISV_027131 [Vitis vinifera]
Length = 1289
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 78/135 (57%), Gaps = 8/135 (5%)
Query: 68 IDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLI 127
I DWR FRA L A EQ + +P P+ LG K AH PE GC+++
Sbjct: 1107 IIVDWREFRAALFAREQA---EKADPEAHSQGGTPQEPK-PLGLKCAHPFPVPETGCVIV 1162
Query: 128 ATEKLDGVHIFERTVILIL---SMEP-MGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
ATEKLDGV FERTV+L+L + P GP G+++NRP I M+ T L+ A TF+D
Sbjct: 1163 ATEKLDGVRSFERTVVLLLRSGTRHPQQGPFGVVINRPLHKKINYMKPTNLELATTFADC 1222
Query: 184 PLFFGGPLEEGLFLV 198
L FGGP+E +FL+
Sbjct: 1223 SLHFGGPVEASMFLL 1237
>gi|145353484|ref|XP_001421041.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581277|gb|ABO99334.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 288
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 118/243 (48%), Gaps = 23/243 (9%)
Query: 66 PLIDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYP------PQNSLGDKWAHTIHE 119
P +++DWR FRA+L+A E+ + P+ + + N P+ + WAH I
Sbjct: 23 PALESDWREFRAQLLARERAVTPEEERARAAAVSEENLKVLETQNPRLAASAPWAHVIGA 82
Query: 120 PEKGCLLIAT--EKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
PEKGCLL+A E F + VIL+L G G+ILNRP+ +M +A
Sbjct: 83 PEKGCLLVAADHEFRMSQQYFHQAVILVLEHHENGSMGVILNRPTQY---DMGYVSGEAN 139
Query: 178 GTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
G F+ L+FGG + +G VS G ++V S +V+ G+Y G ++ A E+V++
Sbjct: 140 GPFAKNALYFGGDVGDG--TVSFLHGREDVKGS---VEVLPGVYLGGYDS---ACELVQQ 191
Query: 238 NAVG--PEDFRFFDGCCGWEKEQLNEEIRAGYW--TVAACSPSVIGLESGTLGLWEELLW 293
+ ++F+FF CGW QL E G W AA S+ + LW E+
Sbjct: 192 DGSTCHADEFKFFARYCGWAPGQLESECERGVWFPVAAAKELSLKQVIQLPKPLWREISE 251
Query: 294 LMG 296
L G
Sbjct: 252 LCG 254
>gi|168010995|ref|XP_001758189.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690645|gb|EDQ77011.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 324
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 111/234 (47%), Gaps = 30/234 (12%)
Query: 69 DADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIA 128
ADWR+FRARLV R + +D Q+ + WAH I +PE GCLLIA
Sbjct: 104 QADWRAFRARLV------RSGLGTGGLDS-------VQDEERELWAHPIVQPEPGCLLIA 150
Query: 129 TEK--LDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLF 186
+ F R VI I + + G +G+ILNRP+ S+ ++ D S PL+
Sbjct: 151 HPNAFTESQQYFHRVVIFIFAHDAGGSAGVILNRPTQYSLGQL-DEFKDLMPELSSCPLY 209
Query: 187 FGGPLEEGLFLVSPKGGGDEVGKSGVFE--QVMEGLYFGTKETVGCAAEMVKRNAVGPED 244
FGG V P+ G G+ + ++M G+Y G ++ + ++ P D
Sbjct: 210 FGGD-------VGPQCTQVIHGIPGLEDSREIMNGVYMGGTASI---QDNIRSGQSTPND 259
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTL--GLWEELLWLMG 296
+R+F GW QL +E+ AG W +A+CS + + L LW E++ MG
Sbjct: 260 YRWFLRFAGWGPGQLEQEVAAGVWYLASCSKRFVLKQCIQLPKPLWNEVMEHMG 313
>gi|412986491|emb|CCO14917.1| predicted protein [Bathycoccus prasinos]
Length = 357
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 92/191 (48%), Gaps = 21/191 (10%)
Query: 113 WAHTIHEPEKGCLLIATEK--LDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMR 170
WAH I +PEKG L++A + F + VIL+L G G+ILNRP++ +M
Sbjct: 164 WAHVIAKPEKGSLIVAATDDFVTSQQYFNQCVILLLEHSKDGSMGVILNRPTMY---KMA 220
Query: 171 STVLDAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGC 230
V D G FS+ L+FGG + +G VS G +V + E+V G++ G G
Sbjct: 221 DVVNDENGPFSENALYFGGDVGDGT--VSFLHGSPDVADA---EEVSPGVFIGGFNDAG- 274
Query: 231 AAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPS-----VIGLESGTL 285
+VK P +F+FF CGW QL +E G W ACS VI L
Sbjct: 275 --RLVKEGKKDPREFKFFARYCGWAPGQLEDECARGVWYPVACSRQIALKPVIALPK--- 329
Query: 286 GLWEELLWLMG 296
LW E+L L G
Sbjct: 330 PLWREVLELCG 340
>gi|298713488|emb|CBJ27043.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 389
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 119/244 (48%), Gaps = 26/244 (10%)
Query: 58 LPSDDHHKPLIDADWRSFRARLVA-AEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHT 116
LP+ D+ D+R FRA+L A +++ + Q++ VN Q + D WAH
Sbjct: 153 LPTGDNK------DFRLFRAKLRAGSDEKWKEQLRR-------NVNVG-QLAGQDAWAHE 198
Query: 117 IHEPEKGCLLIA--TEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVL 174
+ PEKGCL++A T+ F VI + S + G +G ILNRP+ + + ++
Sbjct: 199 LSAPEKGCLIVAKSTQFSMAQTYFNEAVIFLASYDEAGSAGFILNRPTSVQLGDLVEG-- 256
Query: 175 DAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
+A F PL+ GG + EG + G +++ S +++ G+Y G V A M
Sbjct: 257 NALRQFQKTPLYLGGDVGEGNVQILHPFGPEKLTDS---MEIIPGVYIGG--AVDEADRM 311
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTL--GLWEELL 292
V +DF+F CGW QL +EI+ G W A S +VI +L +W E++
Sbjct: 312 VASGRAKVDDFKFMLHLCGWAPGQLEDEIQRGVWMPVATSTNVILKHCLSLPVPMWREVM 371
Query: 293 WLMG 296
LMG
Sbjct: 372 TLMG 375
>gi|428185068|gb|EKX53921.1| hypothetical protein GUITHDRAFT_160742 [Guillardia theta CCMP2712]
Length = 218
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 109/214 (50%), Gaps = 20/214 (9%)
Query: 89 QVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIAT--EKLDGVHIFERTVILIL 146
+ +E S D +++ P+N +W+H + E GCLL+AT E L R+VI +
Sbjct: 9 ETREESQDYKISLDDLPKN----RWSHEMTALEPGCLLLATPNEFLYFQTYLHRSVIFLA 64
Query: 147 SMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDE 206
+ G +G +L++P++ I V D F PL+ GG + G+ ++
Sbjct: 65 KHDEGGSAGFVLDKPAMYEI----GAVTDKLPGFDKCPLYLGGDVGSGIQVLH------R 114
Query: 207 VGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAG 266
V + G ++++G+ G A E++++N +DF+FF W + QL EE++AG
Sbjct: 115 VEELGYSHRIIDGVMMGFDPW--HAKELLEQNKCKEDDFKFFYRYTRWVRGQLEEEVKAG 172
Query: 267 YWTVAACSPSVIGLESGTLG--LWEELLWLMGRR 298
W +AA S +I +S G LW+E+L LMG R
Sbjct: 173 KWFIAAGSSDLIFRKSSKEGAPLWKEVLELMGGR 206
>gi|223998674|ref|XP_002289010.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976118|gb|EED94446.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 393
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 99/201 (49%), Gaps = 24/201 (11%)
Query: 112 KWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSM-EPMGPSGIILNRP---SLMSIK 167
+WAH ++ E GC+L+A EKL GV F +TV+LI+ E G +G+++NRP +L+ I
Sbjct: 185 RWAHPMYHLEPGCILVANEKLGGV--FHQTVVLIIDHNENTGSTGMVINRPFPGNLIKIA 242
Query: 168 EMRSTVLDAA--GTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
T +D + FS P+ +GGP+ + F S G EV + ++V G+Y G
Sbjct: 243 SDTDTNIDLSLKMAFSKAPVAYGGPVMQDQF--STLHGFGEVDGA---KKVCPGVYVGGS 297
Query: 226 ETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGT- 284
+ V+RN + P + F G W QL+ EI G W V A S I +G
Sbjct: 298 SQLMLE---VRRNTMQPTEVLFVKGHAAWVPGQLSREIEKGVWYVVAASADFILRYAGAP 354
Query: 285 -------LGLWEELLWLMGRR 298
LW ++L MG +
Sbjct: 355 VSENDNQSDLWADILSCMGEK 375
>gi|298712289|emb|CBJ26740.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 311
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 87/190 (45%), Gaps = 18/190 (9%)
Query: 113 WAHTIHEPEKGCLLIATEKLDGVHIFERTVILILS-MEPMGPSGIILNRPSLMSIKEMRS 171
WAH I E GCLLIATE++D F ++VIL+LS G G+ILNRP ++ +
Sbjct: 120 WAHDIGTVEAGCLLIATEEIDS-GTFHQSVILVLSHARDQGTLGLILNRPGPQRLRSLPG 178
Query: 172 TVLDAAGTFSDRPLFFGGPLEEGLFLVSPKG---GGDEVGKSGVFEQVMEGLYFGTKETV 228
D A F D +F GGP+ G V G D V GVF + L
Sbjct: 179 LQPDLAEVFGDSQVFDGGPMGLGTMTVLHDANVEGSDPVLDGGVFAGGFDTL-------- 230
Query: 229 GCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIG--LESGTLG 286
++ ++ V + RF G W QL E+ W VAA +P +I +
Sbjct: 231 ---VDVTRQGTVSKDRVRFVHGHSAWSPGQLQGELDHNQWFVAAAAPELITEHCDKPFHP 287
Query: 287 LWEELLWLMG 296
LW +LL LMG
Sbjct: 288 LWTKLLRLMG 297
>gi|307105689|gb|EFN53937.1| hypothetical protein CHLNCDRAFT_53450 [Chlorella variabilis]
Length = 237
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 105/238 (44%), Gaps = 34/238 (14%)
Query: 68 IDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLI 127
+ DWR FRA+LVA E P+ +L + WAH E G LL+
Sbjct: 3 LAGDWREFRAKLVADEG-------------------NPELALEETWAHATGAAEVGGLLL 43
Query: 128 AT---EKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAAGTFSDR 183
AT KL G ++ V+ I+ + G G+ILNRP+ + + R + L G S R
Sbjct: 44 ATLDAPKLLGDEYWQ-AVVFIIRHDEQGTLGLILNRPTSLHMGRGRGGLPLTVEGMESMR 102
Query: 184 PLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVME---GLYFGTKETVGCAAEMVKRNAV 240
F PL G F + + E ME G+Y G + A V +
Sbjct: 103 EAFGASPLYCGGF--KAQQAITLLHGQRRLESCMEVVPGIYIGGQNA---AVVEVTTGGL 157
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTL--GLWEELLWLMG 296
DFRFF GCC W+ +L ++I G W AACS +++ + L LW E + L+G
Sbjct: 158 SQSDFRFFAGCCSWKPGELEQQISRGAWQPAACSRTLVLKQCLKLPVPLWRECMCLLG 215
>gi|397643415|gb|EJK75847.1| hypothetical protein THAOC_02412 [Thalassiosira oceanica]
Length = 388
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 24/201 (11%)
Query: 112 KWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSM-EPMGPSGIILNRP---SLMSIK 167
+WAH + E G LL+A EKL GV F +TV+LI+ E G +G+++NRP L+ I
Sbjct: 180 RWAHPLSHIEPGSLLVANEKLGGV--FHQTVVLIIDHNESTGSTGMVINRPFPGDLIKIA 237
Query: 168 EMRSTVLDAA--GTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
+ +D + TFS P+ +GGP+ + F + G G+ +G +++ G++ G
Sbjct: 238 SETESNIDLSLKMTFSKAPVAYGGPVMQDQF-STLHGFGEVMGS----KKICPGVFVGGS 292
Query: 226 ETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESG-- 283
+ V+R + P + F G W QL+ EI G W +AA S +I +G
Sbjct: 293 SQL---MNEVRRTNLRPTEVLFVKGHAAWVPGQLSREIEKGVWYIAAASSDLILRYAGAP 349
Query: 284 ------TLGLWEELLWLMGRR 298
T LW ++L MG +
Sbjct: 350 MKKGDNTSDLWADILLCMGDK 370
>gi|384252112|gb|EIE25589.1| hypothetical protein COCSUDRAFT_52933 [Coccomyxa subellipsoidea
C-169]
Length = 321
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 114/259 (44%), Gaps = 47/259 (18%)
Query: 70 ADWRSFRARLVAAEQVIRPQ-------VQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEK 122
DW++FRA L++AEQ Q VQE Q S+ WAH PE
Sbjct: 66 GDWKAFRASLISAEQAGEGQDIWSTRWVQENLHLLQEQDRKLAQESI---WAHETELPEI 122
Query: 123 GCLLIATEKLDGVHIFERT--------VILILSMEPMGPSGIILNRPSLMSIKEM----- 169
G LLIA HI E+T VI ++ P G G+ILNRP+ ++ ++
Sbjct: 123 GGLLIAQP-----HIPEKTGDGRLWQLVIFLVEHGPSGSVGLILNRPASATVGDLLSWGY 177
Query: 170 RSTVLDAA------GTFSDRPLFFGGPLEEGLFLVSP----KGGGDEVGKSGVFEQVMEG 219
S +D + G F+D ++ G P G G G +++ G
Sbjct: 178 SSVQMDDSSAKLIQGAFADCQVYLGAFYPPNRIARQPVTLIHGQGHLEGS----KEITPG 233
Query: 220 LYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIG 279
+Y G + A+ + ++ FRFF G W+ QL +EI GYW AACS S++
Sbjct: 234 IYTGGLQQ---ASREILEGSLDKGKFRFFSGQMQWKPGQLAQEIEQGYWYTAACSRSLVL 290
Query: 280 LESGTL--GLWEELLWLMG 296
+ L LW+E+L LMG
Sbjct: 291 KQCLKLPVPLWKEILLLMG 309
>gi|302853744|ref|XP_002958385.1| hypothetical protein VOLCADRAFT_108114 [Volvox carteri f.
nagariensis]
gi|300256265|gb|EFJ40535.1| hypothetical protein VOLCADRAFT_108114 [Volvox carteri f.
nagariensis]
Length = 371
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 106/233 (45%), Gaps = 38/233 (16%)
Query: 71 DWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATE 130
DWR FRA+LV+ + + D+WAH I +PEKG LL+A
Sbjct: 95 DWREFRAKLVSQSR-------------------GGTGAESDEWAHIIPKPEKGALLLAHP 135
Query: 131 KL--DGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFG 188
L F R IL+L +G G+ILNRPS I ++ + F D L+ G
Sbjct: 136 LLFQQSQTYFHRAAILLLEHGDLGSYGVILNRPSKYLIGDV--PLSRPQTQFGDCRLYIG 193
Query: 189 GPLEEG-LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRF 247
G + G + ++ P G SG E V++G+Y G + A + V + FR+
Sbjct: 194 GDVGMGEVQVIHPYGQ-----LSGAAE-VVQGVYAGG---IDAARDAVDAGFAQAKSFRW 244
Query: 248 FDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLG----LWEELLWLMG 296
F+ GW QL E + G W AA SP +I L+ LG W +++ ++G
Sbjct: 245 FNAYAGWGPGQLLMECKRGVWFTAAASPKLI-LQEVELGEGPKYWHKVMSMLG 296
>gi|449018300|dbj|BAM81702.1| unknown transcriptional regulator [Cyanidioschyzon merolae strain
10D]
Length = 461
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 87/186 (46%), Gaps = 26/186 (13%)
Query: 112 KWAHTIHEPEKGCLLIATEK--LDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM 169
+W H + E G +L+A+ K L+ F +TVIL+L G +G+I+NR + I +
Sbjct: 196 RWVHPVTAIETGNILVASPKHFLNEQQYFAQTVILVLEHGSDGTTGVIMNRRAAQRISFV 255
Query: 170 RSTV-LDAAGTFSDRPLFFGGPL---------EEGLFLVS------PKGGGDEVGKSGVF 213
S D F L+ GGP+ +E L S P DEV +
Sbjct: 256 SSLAGTDLGRVFGREALYLGGPVGLDSLLVLHDESSLLASNDRQQLPGSAADEV----AY 311
Query: 214 EQVMEGLYFGTKETVGCAAEMVKRNAVG-PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAA 272
E V G+Y G +G E+ +R ++ P+ RFF G CGWE QL E+ G W VA+
Sbjct: 312 EIVPGGVYCGG---LGRLTELARRGSLARPDRVRFFCGYCGWEPGQLEREVHQGVWYVAS 368
Query: 273 CSPSVI 278
S +I
Sbjct: 369 ASAELI 374
>gi|255073647|ref|XP_002500498.1| predicted protein [Micromonas sp. RCC299]
gi|226515761|gb|ACO61756.1| predicted protein [Micromonas sp. RCC299]
Length = 271
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 97/228 (42%), Gaps = 32/228 (14%)
Query: 61 DDHHKPLID--ADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDK------ 112
DD H ++ DWR+FRA LV E R + + N ++ +
Sbjct: 3 DDSHSDTVEVKGDWRAFRAALVNQEHAHRQRFNQQQQANHVVTNLSAASTAYSRRQASKI 62
Query: 113 ----WAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE 168
WAH + E E GCLL+A E +G + +V+L+L+ + G +G+ILNRP+ +K
Sbjct: 63 TPGDWAHVLPEAETGCLLLAPETEEG--WWRHSVVLVLNHDAEGSTGVILNRPTNAQLKN 120
Query: 169 MRSTVLDAA---GTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
+ + +A ++R + GGP+ G E G + L T
Sbjct: 121 VVPEIDYSAPHHRVLANRHVSMGGPM------------GTEKGARCLVALSHTRLDGATS 168
Query: 226 ETVGCAAEMVKRNAVGPE---DFRFFDGCCGWEKEQLNEEIRAGYWTV 270
E + +AV PE F G CGW QLN E+ A WTV
Sbjct: 169 EVFPGLWHVSDFSAVKPEHEPSLMVFVGYCGWMSGQLNAEVAANGWTV 216
>gi|428181904|gb|EKX50766.1| hypothetical protein GUITHDRAFT_66602 [Guillardia theta CCMP2712]
Length = 213
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 93/199 (46%), Gaps = 22/199 (11%)
Query: 68 IDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLI 127
+D DWR+FRA+LV +E V E DA +NSL W H + PE+GCL++
Sbjct: 5 LDEDWRTFRAKLVWSEGA----VAETETSSDAMKQ---ENSL---WLHQLPIPERGCLML 54
Query: 128 ATEKL--DGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPL 185
A D F +++I+++ MG G I NRP+ + E+ + F PL
Sbjct: 55 ANPMKFGDSQSYFSKSIIVLIEYGVMGTVGFINNRPTPHLVGEV--SFAQTHRAFLHCPL 112
Query: 186 FFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDF 245
FFGGP+ E + ++ V ++ GLY G + A +V+ EDF
Sbjct: 113 FFGGPVGETVHVL------HRVATVKGARLIVPGLYHGGD--LDHAGSLVESGEAKLEDF 164
Query: 246 RFFDGCCGWEKEQLNEEIR 264
RFF W QL +E++
Sbjct: 165 RFFYKHSSWGPGQLEDEVK 183
>gi|159467705|ref|XP_001692032.1| hypothetical protein CHLREDRAFT_183306 [Chlamydomonas reinhardtii]
gi|158278759|gb|EDP04522.1| predicted protein [Chlamydomonas reinhardtii]
Length = 315
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 108/233 (46%), Gaps = 34/233 (14%)
Query: 70 ADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIAT 129
+DWR FRA+LV+ + ++ D+WAH I +PEKG LL+A
Sbjct: 88 SDWREFRAKLVSQSR-----------------GQGSASTSADEWAHIIPKPEKGALLLAH 130
Query: 130 EKL--DGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFF 187
L + F R IL+L G G+ILNRPS I+++ + F+D L+
Sbjct: 131 PLLFQNSQTYFHRAAILLLEHGDNGSYGVILNRPSTYFIRDI--PLKRPQTQFNDCRLYV 188
Query: 188 GGPLEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFR 246
GG + G + P G D G +V++G+Y G + A + K A +DFR
Sbjct: 189 GGDVGGGEVQVLHPHG--DLAGAV----EVVKGVYMGGLDAGRDAIDAGKAQA---QDFR 239
Query: 247 FFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI--GLESGT-LGLWEELLWLMG 296
+F GW QL E + G W AA SP ++ +E G W EL+ L+G
Sbjct: 240 WFSAYAGWAPGQLAMECKRGVWFTAAASPKLLLKEVEHGQGPSFWHELMTLLG 292
>gi|219124475|ref|XP_002182528.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405874|gb|EEC45815.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 393
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 92/199 (46%), Gaps = 24/199 (12%)
Query: 112 KWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILS-MEPMGPSGIILNRP---SLMSIK 167
+WAH I E GC+LIA EKL GV F +TV+LI+ E G +GI++NRP L+ I
Sbjct: 185 RWAHEISHVEPGCVLIANEKLGGV--FHQTVVLIIDHHETTGSTGIVINRPMDGDLLKIA 242
Query: 168 EMRSTVLDAA--GTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
+ + LD + FS + +GGP+ F V G G+ G ++ G+Y G
Sbjct: 243 SEQESSLDLSLKLAFSQARVTYGGPVLTDEFSV-LHGFGEVEGS----RKLCPGVYIGGS 297
Query: 226 ETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESG-- 283
E + ++ + P F G GW QL EI G W AA S I +G
Sbjct: 298 EELMNEVRTLRFD---PAHALFVKGHAGWVPGQLTREISKGVWYTAAASSDFILRYAGAP 354
Query: 284 ------TLGLWEELLWLMG 296
LW ++L MG
Sbjct: 355 VTEDDNANDLWADILSCMG 373
>gi|313674345|ref|YP_004052341.1| hypothetical protein Ftrac_0222 [Marivirga tractuosa DSM 4126]
gi|312941043|gb|ADR20233.1| protein of unknown function DUF179 [Marivirga tractuosa DSM 4126]
Length = 192
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 16/185 (8%)
Query: 116 TIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLD 175
I +P+KG LL++ L + F+RTVIL+ G G +LN+ S++ + E VL
Sbjct: 8 NIEQPQKGDLLLSEPFLPDQN-FDRTVILLCEHNEEGSFGFVLNKLSILKVDE----VLQ 62
Query: 176 AAGTFSDRPLFFGGPLEEG-LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
G+F + LF GGP+++ L + DE+ + G +++ GLY+G + ++
Sbjct: 63 QIGSF-EAELFVGGPVQQNTLHFIH---NIDELKEGG--QKITNGLYWGGDFEI--LQDL 114
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA-ACSPSVIGLESGTLGLWEELLW 293
+++ A+ E RFF G GW + QL EEI W +A PS I S LW+ +L
Sbjct: 115 MQKGALDKEKSRFFVGYSGWSENQLQEEIDHNSWIIARGVHPSYI-FNSPPETLWKSILE 173
Query: 294 LMGRR 298
MG R
Sbjct: 174 KMGGR 178
>gi|384254174|gb|EIE27648.1| hypothetical protein COCSUDRAFT_64323 [Coccomyxa subellipsoidea
C-169]
Length = 303
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 70 ADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIAT 129
A+WR +RA LV E+ PS P++ WAH + PE+GCLL+A
Sbjct: 71 ANWRLYRASLVQQERAGLFSDGLPSTQQLRGRLVLPRH-----WAHELGAPERGCLLVA- 124
Query: 130 EKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+ D + ++V+L+L + G +G+ILN PS + + + D AG F + L+ GG
Sbjct: 125 RRPDMGPLHTQSVVLLLEHDLQGSAGLILNCPSANARVRSCTCLPDIAGAFKQQLLYQGG 184
Query: 190 PLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFF 248
+ E L L+ G V + FE V++G+Y G + A E+V +F+
Sbjct: 185 SVATERLHLLH---GNPAVADT--FE-VIDGIYTG---GLAHANELVASGRAAASEFKLL 235
Query: 249 DGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G W +L EI G+W + A S I
Sbjct: 236 AGYAHWPWGELQREIARGHWWLVAASSDFI 265
>gi|163788098|ref|ZP_02182544.1| hypothetical protein FBALC1_06953 [Flavobacteriales bacterium
ALC-1]
gi|159876418|gb|EDP70476.1| hypothetical protein FBALC1_06953 [Flavobacteriales bacterium
ALC-1]
Length = 184
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 95/187 (50%), Gaps = 19/187 (10%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+PEKG LLIA + G F R VIL+ +G G ILN+P ++K++ G
Sbjct: 3 KPEKGNLLIAEPSIIGDISFNRAVILLADHNALGSVGFILNKPLNYNLKDL------IEG 56
Query: 179 TFSDRPLFFGGPLEE-GLFLV--SPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
T S+ ++ GGP+E+ L+ + SP+ + + ++ G+++G +V ++
Sbjct: 57 TESEFTVYNGGPVEQDNLYFIHKSPELIPNSI-------EISNGIFWGGDFSV--VLNLI 107
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELLWL 294
+ + +D RFF G GW+++QL+ E+++ W V+ + + W E++L L
Sbjct: 108 NDDQISQDDIRFFLGYSGWDEQQLDNELQSNAWLVSENVYNNEIISKSCNSFWREKMLEL 167
Query: 295 MGRRKVW 301
G +W
Sbjct: 168 GGDYSIW 174
>gi|302845343|ref|XP_002954210.1| hypothetical protein VOLCADRAFT_106296 [Volvox carteri f.
nagariensis]
gi|300260415|gb|EFJ44634.1| hypothetical protein VOLCADRAFT_106296 [Volvox carteri f.
nagariensis]
Length = 628
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 99/251 (39%), Gaps = 49/251 (19%)
Query: 62 DHHKPLIDADWRSFRARLVAAEQVIRP-------QVQEPSVDPDAAVNYPPQNSLGDKWA 114
D P++ DWR FRA+L+ R ++Q PS+ + WA
Sbjct: 385 DEEAPMVTGDWREFRAKLIMQSGARRSEDNRRLLEIQNPSLAAEGL------------WA 432
Query: 115 HTIHEPEKGCLLIATEKLDGVHIFE-----RTVILILSMEPMGPSGIILNRPSLMSIKEM 169
H PE G L+IA+ L G I + V+ + S G G+ILNRP+ M +
Sbjct: 433 HATSRPETGGLVIAS--LQGPTILNDDRLWQVVVFLTSHGADGSVGLILNRPTGMVLGRK 490
Query: 170 RSTVLDAAGTFSDRPLFFGGPLEEGLFLVSPKG--GGDEVGKSGVFEQVMEGLYFGTKET 227
+ PL GGP+ + GG + +M G
Sbjct: 491 PGGL----------PLELGGPVPVQRVFQDNRVYCGGFTAQQLVAVIHIMHGHRLN---- 536
Query: 228 VGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTL-- 285
V+ + DF+FF G W QL EE+ G W AACS S++ + L
Sbjct: 537 -----HCVQEGRLPSTDFKFFAGALTWAPGQLEEEVAKGAWYPAACSRSLVLKPALQLPV 591
Query: 286 GLWEELLWLMG 296
LW E+L LMG
Sbjct: 592 PLWREVLQLMG 602
>gi|347535988|ref|YP_004843413.1| putative transcriptional regulator [Flavobacterium branchiophilum
FL-15]
gi|345529146|emb|CCB69176.1| Putative transcriptional regulator [Flavobacterium branchiophilum
FL-15]
Length = 196
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 14/171 (8%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
+KGCLLIA L G +IF R +IL+ G G ILN+P +++++ +
Sbjct: 17 KKGCLLIAEPSLIGDNIFNRAIILLAENNANGALGFILNKPLDLTVQDFIPQI------D 70
Query: 181 SDRPLFFGGPLEE-GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
S ++ GGP+E+ L+ + K + + S +++ +G+Y+G + ++ +
Sbjct: 71 SSFKIYNGGPVEQDNLYFIHTK--PELIPDS---QEISDGIYWGGQ--FELVINLINQKL 123
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEE 290
+ +D RFF G GW K QL +EI+ W +A S L + +W++
Sbjct: 124 IQKDDIRFFLGYTGWSKNQLEDEIKEKSWLIANNSNQKNILSIKSKNMWKQ 174
>gi|345302063|ref|YP_004823965.1| hypothetical protein Rhom172_0180 [Rhodothermus marinus
SG0.5JP17-172]
gi|345111296|gb|AEN72128.1| UPF0301 protein yqgE [Rhodothermus marinus SG0.5JP17-172]
Length = 183
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 92/174 (52%), Gaps = 15/174 (8%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LLIA L+ + F RTV+L+ + G G+ILNRP+ ++++E VLD ++
Sbjct: 9 GILLIAPPMLEDPN-FWRTVVLLCAHGEDGSFGLILNRPTTLTLRE----VLDVPVSY-- 61
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
PLF GGP++ + + G DE+ ++ + V++G+Y+G + V + ++ N P
Sbjct: 62 -PLFMGGPVQPDTLHILHRLG-DEIPEA---QSVVDGVYWGGE--VEALLDRLRTNPPEP 114
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
++ RFF G GW QL E AG W +A + + E LW +L MG
Sbjct: 115 DEMRFFLGYSGWAPGQLEAEYEAGGWILAPAHAANV-FEDTPEKLWRTVLRRMG 167
>gi|302799862|ref|XP_002981689.1| hypothetical protein SELMODRAFT_421192 [Selaginella moellendorffii]
gi|300150521|gb|EFJ17171.1| hypothetical protein SELMODRAFT_421192 [Selaginella moellendorffii]
Length = 289
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 92/226 (40%), Gaps = 27/226 (11%)
Query: 71 DWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATE 130
DWRSFRA L+ E P + WAH I E G +L+AT
Sbjct: 80 DWRSFRAALLMNE-------------AGQQQQQQPHQA----WAHQISCLEPGSVLVATS 122
Query: 131 KLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR-PLFFGG 189
+ +F+ +V+LI+ G+ILN+ + ++ DA P F G
Sbjct: 123 AVQRHSLFQNSVVLIIQSSESSCKGLILNKLMPFPVDDVPLMEPDAIRLAELTCPAFVAG 182
Query: 190 PLEEGLFLVSPKGGGDEVGKSGV---FEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFR 246
P F S K + S + + +GLY G T+ V+R V PED R
Sbjct: 183 PH----FPFSYKPQVHLLTSSNHLRGYRTLTDGLYLGQSHTLRSTVSSVQRGLVDPEDVR 238
Query: 247 FFDGCCGWEKEQLNEEIRA-GYWTVAACSPSVIGLESGTLGLWEEL 291
WE++QL EIRA +W + +CS + L+ LW L
Sbjct: 239 ILVNEVEWERQQLEVEIRASNWWKILSCSSDTL-LQVPASQLWRSL 283
>gi|268315772|ref|YP_003289491.1| hypothetical protein Rmar_0197 [Rhodothermus marinus DSM 4252]
gi|262333306|gb|ACY47103.1| protein of unknown function DUF179 [Rhodothermus marinus DSM 4252]
Length = 183
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LLIA L+ + F RTV+L+ + G G+ILNRP+ ++++E VLD ++
Sbjct: 9 GILLIAPPMLEDPN-FWRTVVLLCAHGEDGSFGLILNRPTTLTLRE----VLDVPVSY-- 61
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
PLF GGP++ + + G DE+ ++ + V+ G+Y+G + V + ++ N P
Sbjct: 62 -PLFVGGPVQPDTLHILHRLG-DEIPEA---QPVVNGVYWGGE--VEALLDRLRTNPPEP 114
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
++ RFF G GW QL E AG W +A + + E LW +L MG
Sbjct: 115 DEMRFFLGYSGWAPGQLEAEYEAGGWILAPAHAANV-FEDTPEKLWRTVLRRMG 167
>gi|390955125|ref|YP_006418883.1| putative transcriptional regulator [Aequorivita sublithincola DSM
14238]
gi|390421111|gb|AFL81868.1| putative transcriptional regulator [Aequorivita sublithincola DSM
14238]
Length = 186
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 19/190 (10%)
Query: 116 TIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLD 175
T +P KG LL+A + G F R+V+L+ G G ILN+P + +++ V
Sbjct: 2 TTLKPAKGLLLVAEPSIIGDVSFNRSVVLLAEYNESGSVGFILNKPLELKLRDYVPEV-- 59
Query: 176 AAGTFSDRPLFFGGPLEE-GLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAA 232
S P++ GGP+E+ L+ + P + + ++ G+Y+G
Sbjct: 60 ----NSKLPVYNGGPVEQDNLYFIHCIPDIIPNSI-------EISNGIYWGGD--FNAII 106
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EEL 291
+++K + + E RFF G GWE EQL++E+ W VA S + + + W E++
Sbjct: 107 DLLKEDKLKKEQIRFFLGYSGWESEQLDQELEVNSWVVAPNSYNDTIIGKSNINFWKEKM 166
Query: 292 LWLMGRRKVW 301
L G +W
Sbjct: 167 LEFGGDYVLW 176
>gi|441498058|ref|ZP_20980260.1| hypothetical protein C900_02539 [Fulvivirga imtechensis AK7]
gi|441438134|gb|ELR71476.1| hypothetical protein C900_02539 [Fulvivirga imtechensis AK7]
Length = 191
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 15/182 (8%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
+PEKG LLI+ L + FERTV+L+ G G +LN+ S ++++E +++
Sbjct: 10 QKPEKGSLLISEPFLPDPN-FERTVVLLCEHSSEGSFGFVLNKVSAVTLEE----IMEDV 64
Query: 178 GTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
+F++ P++ GGP+++ + E G +V GLY+G ++
Sbjct: 65 NSFNE-PVYIGGPVQQDTLHFIHRANYLEGGV-----EVSPGLYWGG--NFEQLMILIDT 116
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAA-CSPSVIGLESGTLGLWEELLWLMG 296
+ EDFRFF G GW QL +E++ W VA +P ++ E G LW +L +G
Sbjct: 117 KQIKAEDFRFFIGYSGWGAGQLEDELKTDSWIVANHATPDLVFEEDGE-NLWRAVLKQLG 175
Query: 297 RR 298
R
Sbjct: 176 GR 177
>gi|89891490|ref|ZP_01202995.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
gi|89516264|gb|EAS18926.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
Length = 186
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 15/185 (8%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
E KG LL++ + G F R+V+L+ + G G ILN+P ++ ++ +
Sbjct: 5 EIHKGSLLVSEPNIIGDESFSRSVVLLTEYDDNGIVGFILNKPLQYTLNDLVPEIE---- 60
Query: 179 TFSDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
+ P+F GGP+E + L+ + D + S + + + +Y+G E++
Sbjct: 61 --LELPIFQGGPVEMDNLYFL--HSIPDLIPNSHL---IADDIYWGGD--FQSVHELISN 111
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELLWLMG 296
N + ++ +FF G GW KEQL +EI W + + + + L GLW +E+L L G
Sbjct: 112 NKISGDEIKFFLGYSGWHKEQLLQEINEHSWIIKPNTSTDLILSDEIHGLWKKEMLELGG 171
Query: 297 RRKVW 301
K+W
Sbjct: 172 SYKLW 176
>gi|325288079|ref|YP_004263869.1| hypothetical protein Celly_3181 [Cellulophaga lytica DSM 7489]
gi|324323533|gb|ADY30998.1| protein of unknown function DUF179 [Cellulophaga lytica DSM 7489]
Length = 186
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 91/183 (49%), Gaps = 18/183 (9%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
I++P+KG LLIA L G F R+++L+ G G ILN+P +I ++ V D
Sbjct: 3 INQPQKGNLLIAEPSLTGDVSFNRSIVLLAEHNNDGSVGFILNKPLEYTINDL---VDDI 59
Query: 177 AGTFSDRPLFFGGPLEE-GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGT--KETVGCAAE 233
+F ++ GGP+E+ L+ + E G E + G+++G ++ VG
Sbjct: 60 KPSFR---VYNGGPVEQDNLYFIHKVPDLIE----GSIE-ISNGIFWGGDFQKIVG---- 107
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLW 293
++ N + D RFF G GW+ QL+ E+ + W +A + LE T LW+E +
Sbjct: 108 LINNNIITQNDIRFFLGYSGWDSMQLDYELTSKSWIIATNEHKSLILEKCTNNLWKEKMD 167
Query: 294 LMG 296
+G
Sbjct: 168 QLG 170
>gi|330752074|emb|CBL80584.1| hypothetical protein S18_1013_0007 [uncultured Leeuwenhoekiella
sp.]
Length = 186
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 20/160 (12%)
Query: 116 TIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLD 175
T ++PEKG LLIA + G F R+V+L+ + G G ILN+P ++ E+ +
Sbjct: 2 TTNKPEKGNLLIAEPAIIGDVSFNRSVVLLANHSEEGSVGFILNKPLTFTLNELIPEIE- 60
Query: 176 AAGTFSDRPLFFGGPLEE-GLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTK-ETVGCA 231
+ ++ GGP+E+ L+ + P D + ++ G+Y+G ETV
Sbjct: 61 -----IEMQIYNGGPVEQDNLYFLHKVPHLIPDSI-------EIASGIYWGGDFETV--- 105
Query: 232 AEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
E++ N + E+ RFF G GW+ +QL++E+ A W VA
Sbjct: 106 IELITSNKINAEEIRFFLGYSGWDCDQLDDELNANSWIVA 145
>gi|319954831|ref|YP_004166098.1| hypothetical protein [Cellulophaga algicola DSM 14237]
gi|319423491|gb|ADV50600.1| protein of unknown function DUF179 [Cellulophaga algicola DSM
14237]
Length = 186
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 20/190 (10%)
Query: 117 IH-EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLD 175
IH +PEKG LLIA L G F R+V+L+ G G ILN+P SI ++ + +
Sbjct: 2 IHLQPEKGKLLIAEPALAGDVSFSRSVVLLAEHGEDGSVGFILNKPLDYSISDLVTEIEV 61
Query: 176 AAGTFSDRPLFFGGPLEE-GLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAA 232
F+ GGP+E+ L+ + P+ + + ++ +G+Y+G C
Sbjct: 62 PFKVFN------GGPVEQDNLYFIHKVPELIANSI-------EISDGIYWGGD--FECIV 106
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEE-L 291
++ NA+ ED RFF G GW QL++E+ + W + ++ W+E +
Sbjct: 107 GLINTNAISEEDIRFFLGYTGWSSLQLDQELSSKSWAILPNKYESSIIQKAPGAFWKENM 166
Query: 292 LWLMGRRKVW 301
L L G +W
Sbjct: 167 LTLGGDYLLW 176
>gi|384249675|gb|EIE23156.1| DUF179-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 256
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 97/220 (44%), Gaps = 30/220 (13%)
Query: 87 RPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATEKL--DGVHIFERTVIL 144
R V E S +PD WAH+I+ PEKGCLLIA + F + VI
Sbjct: 23 RKGVSEKSTEPDEESKL---------WAHSINFPEKGCLLIAHPLVFTTQQQYFAQAVIF 73
Query: 145 ILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPLE-EGLFLVSPKGG 203
I G +G+ILN+P+ +I M S + F++ LF GG + + ++ G
Sbjct: 74 IFEHSEQGSAGLILNKPTQYTIGTM-SGLEALCPEFNNNGLFLGGDVSPNSMHMLHCHGQ 132
Query: 204 GDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEI 263
E +++ G+ G + A V + + DF++F GW QL E
Sbjct: 133 LPEA------VEIIRGINMGGFDAAKAA---VSQGRMPATDFKWFTRYSGWGAGQLQREC 183
Query: 264 RAGYWTVAACSPSVIGLESGTLG-------LWEELLWLMG 296
+G W AA S +++ L+ G +W ++L L+G
Sbjct: 184 ASGVWFTAAASSALV-LQQGCADSADSGREMWHQVLNLIG 222
>gi|260062637|ref|YP_003195717.1| transcriptional regulator [Robiginitalea biformata HTCC2501]
gi|88784204|gb|EAR15374.1| putative transcriptional regulator [Robiginitalea biformata
HTCC2501]
Length = 186
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P+KG LLIA L G F R+V+L+ G G ILN+P S+ ++ V +
Sbjct: 5 QPKKGKLLIAEPALTGDVSFNRSVVLLAEHNQEGSVGFILNKPLNYSMSDL---VDEIQV 61
Query: 179 TFSDRPLFFGGPLEE-GLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
F P++ GGP+E+ L+ + P D V ++ +G+Y+G A ++
Sbjct: 62 PF---PVYNGGPVEQDNLYFIHKVPDLISDSV-------EISDGIYWGGDFDTTVA--LI 109
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELLWL 294
+ D RFF G GW QLN+E+ + W V ++ T W E+++ L
Sbjct: 110 NERKISQNDIRFFLGYSGWASLQLNQELDSKSWIVVTNKYESDIIQKSTQAFWREKMMEL 169
Query: 295 MGRRKVW 301
G +W
Sbjct: 170 GGDYLLW 176
>gi|145343523|ref|XP_001416370.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576595|gb|ABO94663.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 236
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 24/196 (12%)
Query: 94 SVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGP 153
S+D + PP WAH + EKG LL+A E+ D + VI +L P G
Sbjct: 14 SIDAASRDGSPP------TWAHGLENLEKGALLVAVEE-DASSFWSHVVIFMLDHTPYGS 66
Query: 154 SGIILNRPSLMSIKE---------MRSTVLDAAGTFSDRPLFFGGPLEEGLFLVSPKGGG 204
+GIILNR ++ + + ++L P+ L+ + ++ K
Sbjct: 67 TGIILNRTQSWTLAKHCPEVKHDNLYWSLLSEEVVGVGGPVGLDHSLDRSVIALTTKE-- 124
Query: 205 DEVGKSGVFEQVMEGLY--FGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEE 262
+ G+ E+V+ G+Y + A++ + PED F G GW QL E
Sbjct: 125 ----QPGMTEEVIPGIYRVINLDQLAKLNAKLSGPGTLRPEDLSLFVGYSGWSPGQLQSE 180
Query: 263 IRAGYWTVAACSPSVI 278
I AG+WT+A+ S + +
Sbjct: 181 IDAGFWTLASASGTYV 196
>gi|428168866|gb|EKX37806.1| hypothetical protein GUITHDRAFT_43931, partial [Guillardia theta
CCMP2712]
Length = 163
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 15/161 (9%)
Query: 113 WAHTIHEPEKGCLLIA---TEKLDGVH-IFERTVILILSMEPMGPSGIILNRPSLMSIKE 168
WA I E + GCLL++ T + G + +++V+L++ G SG I+NRP+ ++ +
Sbjct: 1 WAVEIDEVQPGCLLVSSPETFRFAGSRLVLDQSVVLLVRHGASGSSGFIINRPTQYNVGD 60
Query: 169 MRSTVLDAAGTFSDRPLFFGGPLEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKET 227
+ + F PL+ GG + EG+++ VS G + + +V +G+Y+G E
Sbjct: 61 VTKKL----PMFEQNPLYLGGDIGEGVYMSVSSIHGVPGLRNA---TEVSDGIYYGGSEH 113
Query: 228 VGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYW 268
A ++V +DFRFF W QL EI++G W
Sbjct: 114 ---AMQLVSEGKAEAKDFRFFFKYVAWAPGQLEAEIQSGCW 151
>gi|78186520|ref|YP_374563.1| hypothetical protein Plut_0637 [Chlorobium luteolum DSM 273]
gi|119369533|sp|Q3B561.1|Y637_PELLD RecName: Full=UPF0301 protein Plut_0637
gi|78166422|gb|ABB23520.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
Length = 189
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 78/161 (48%), Gaps = 22/161 (13%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS- 181
G LLIA+ L + F+RTV+++ P G G ILNRP M V +A F
Sbjct: 13 GKLLIASANLLESN-FKRTVLMMCEHNPQGSLGFILNRP-------MEFQVREAVAGFDE 64
Query: 182 -DRPLFFGGPLEEGL--FLVSPKGGGDEVGKSGVFEQVMEGLYFG-TKETVGCAAEMVKR 237
D PL GGP++ FL GD + S EQ++ GLY+G +E +G ++
Sbjct: 65 VDEPLHMGGPVQSNTVHFLHMR---GDLIDGS---EQILPGLYWGGDREELGY---LLNT 115
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ P + RFF G GW QL E G W A +P+++
Sbjct: 116 GVLKPSEIRFFLGYAGWSAGQLEAEFEEGSWYTADATPAMV 156
>gi|193213906|ref|YP_001995105.1| hypothetical protein Ctha_0187 [Chloroherpeton thalassium ATCC
35110]
gi|193087383|gb|ACF12658.1| protein of unknown function DUF179 [Chloroherpeton thalassium ATCC
35110]
Length = 187
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 14/160 (8%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P++G LLIA +L + F+R+V+L+ G G+ILN+P ++I E + D
Sbjct: 8 PKRGILLIAGAQLIDPN-FKRSVVLLCEHNEEGTFGLILNKPLDINISEAIEDIEDW--- 63
Query: 180 FSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFG-TKETVGCAAEMVKRN 238
D L GGP++ V + G DE+ + +V++G+Y+G ET+ M+
Sbjct: 64 --DIALHAGGPVQPNTVHVLHRLG-DEIEDA---IEVVDGVYWGGNYETI---RSMINTR 114
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
P+DFRFF G GW QL +EI W A + +V+
Sbjct: 115 HASPDDFRFFLGYSGWGPGQLQQEIDQDSWYQAKATANVV 154
>gi|365121990|ref|ZP_09338898.1| hypothetical protein HMPREF1033_02244 [Tannerella sp.
6_1_58FAA_CT1]
gi|363643535|gb|EHL82850.1| hypothetical protein HMPREF1033_02244 [Tannerella sp.
6_1_58FAA_CT1]
Length = 199
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 14/158 (8%)
Query: 116 TIHEPEKGCLLIATEKLDGVHIFERTVILILSMEP-MGPSGIILNRPSLMSIKEMRSTVL 174
++ +P GCLL++ L+ V+ F+R+V+L++ +P +G G++LN+ S + M +TV+
Sbjct: 13 SLKDPYTGCLLVSEPCLNEVY-FQRSVVLLVDHDPTIGSMGLVLNKSSNL----MLNTVI 67
Query: 175 DAAGTFSDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
+ P+F GGP+E + LF + G SG E + EGLY G +
Sbjct: 68 VGLENVPEIPVFCGGPMESDHLFYIHTLGRI----VSGSIE-IAEGLYIGGD--IEEILS 120
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
++R +FF G GWE QL EEI YW V+
Sbjct: 121 YIRRGNTVEGHIKFFLGYSGWEAGQLEEEIANIYWIVS 158
>gi|254360571|ref|ZP_04976720.1| hypothetical protein MHA_0126 [Mannheimia haemolytica PHL213]
gi|261493724|ref|ZP_05990242.1| hypothetical protein COK_2125 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261494546|ref|ZP_05991030.1| hypothetical protein COI_0332 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|452743661|ref|ZP_21943525.1| hypothetical protein F388_00931 [Mannheimia haemolytica serotype 6
str. H23]
gi|153091111|gb|EDN73116.1| hypothetical protein MHA_0126 [Mannheimia haemolytica PHL213]
gi|261309795|gb|EEY11014.1| hypothetical protein COI_0332 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261310614|gb|EEY11799.1| hypothetical protein COK_2125 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|452088279|gb|EME04638.1| hypothetical protein F388_00931 [Mannheimia haemolytica serotype 6
str. H23]
Length = 186
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 15/187 (8%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE----MRSTVL 174
E +G LIAT ++D + FERTV+ I P G G+++N P+ +S+ E M +
Sbjct: 3 ENLQGKFLIATPEMDDDY-FERTVVYICEHNPQGAMGVVINTPTDLSVLELITRMDFQMA 61
Query: 175 DAAGTFSDRPLFFGGPLEEGL-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
+ D+ + GGP+ + F++ K D + + +++ ++ G A
Sbjct: 62 NQRDYKKDQMVLSGGPVNQDRGFIIHTKTANDFIHTYPITDKITLTTSGDVLDSFGTLA- 120
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLW 293
PE F GC W QL +EI YW V+ + + E+G L W E
Sbjct: 121 -------SPEKFIVCLGCSTWRGSQLEQEIAQNYWIVSDANEKTL-FETGYLERWAEAYE 172
Query: 294 LMGRRKV 300
+MG +
Sbjct: 173 MMGLSSI 179
>gi|295134366|ref|YP_003585042.1| hypothetical protein ZPR_2523 [Zunongwangia profunda SM-A87]
gi|294982381|gb|ADF52846.1| conserved hypothetical protein [Zunongwangia profunda SM-A87]
Length = 186
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 19/187 (10%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P KG LLIA + G F R+V+L+ G G ILN+ ++K++ G
Sbjct: 5 KPSKGHLLIAEPSIIGDISFNRSVVLLAEHSERGSVGFILNKVLDFTLKDL------IPG 58
Query: 179 TFSDRPLFFGGPLEE-GLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
D ++ GGP+E+ L+ + P D V ++ +G+Y+G ++
Sbjct: 59 LNVDFQIYNGGPVEQDNLYFIHRVPDLIPDSV-------EIADGIYWGG--NFDAVTTLI 109
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELLWL 294
+N + RFF G GW+ EQLN E+ + W V +E W ++++ L
Sbjct: 110 SQNMIDENQIRFFLGYSGWDAEQLNNELDSNSWIVVTNEDQKSIIERPYDSFWKDQMMQL 169
Query: 295 MGRRKVW 301
G +W
Sbjct: 170 GGEYVLW 176
>gi|255638392|gb|ACU19507.1| unknown [Glycine max]
Length = 204
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 58/105 (55%), Gaps = 16/105 (15%)
Query: 63 HHKPLIDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVN---YPPQNSLGDKWAHTIHE 119
HH L DWR FRA+L R +++E S D D P LG +WAH I
Sbjct: 98 HHTNL---DWREFRAKLY------RDELKEIS-DADTHNQGGTLPISKPLGAQWAHPIPV 147
Query: 120 PEKGCLLIATEKLDGVHIFERTVILIL---SMEPMGPSGIILNRP 161
PE GC+L+ATEKLDGV FERTVIL+L + I++NRP
Sbjct: 148 PETGCVLVATEKLDGVRTFERTVILLLRSGTRHHQETFWIVINRP 192
>gi|149176404|ref|ZP_01855018.1| hypothetical protein PM8797T_07774 [Planctomyces maris DSM 8797]
gi|148844756|gb|EDL59105.1| hypothetical protein PM8797T_07774 [Planctomyces maris DSM 8797]
Length = 188
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 14/174 (8%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
KG L+A+ KL+ ++ F R+V+LI+ G +G+I+NRPS SI S D
Sbjct: 6 KGHFLVASRKLNDLN-FYRSVVLIVEHNEQGATGLIVNRPSSFSITNALSRYFDMPKL-- 62
Query: 182 DRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
+ +F GGP+E G+F + G ++ KS E ++ L+ G+ + +++ R +
Sbjct: 63 EDMVFMGGPVEPNGMFALHNAG---DLEKST--EAIVPDLFMGSSPEI--FEQVIWRISE 115
Query: 241 GPE--DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
G DFR F GC GW QL EI W + I E +W+ LL
Sbjct: 116 GDPHLDFRIFFGCAGWAPLQLESEINRMDWLNTPATTEDI-FEIDPYDIWDTLL 168
>gi|333030039|ref|ZP_08458100.1| UPF0301 protein yqgE [Bacteroides coprosuis DSM 18011]
gi|332740636|gb|EGJ71118.1| UPF0301 protein yqgE [Bacteroides coprosuis DSM 18011]
Length = 196
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 83/184 (45%), Gaps = 16/184 (8%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P+ G LLIA L + F R+V+L+++ GIILN P S+ ++ + D G
Sbjct: 17 PDTGKLLIAEPFLTD-YPFSRSVVLLVNHSLESSMGIILNVPMHQSLNDI---ITDLKG- 71
Query: 180 FSDRPLFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
+ PL+ GGPL E+ LF + + LY E++
Sbjct: 72 LENIPLYRGGPLGEDILFFIHSHSHIPAALP------ITNKLYLNGD--FDIVKELLLEG 123
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG-R 297
V P DFRFF G GW EQL E++ W V I +S L LW+ +L MG +
Sbjct: 124 KVEPNDFRFFLGYSGWGPEQLQNELKTNTWLVTEEPAEYIINQSAKL-LWKNILHNMGYK 182
Query: 298 RKVW 301
K+W
Sbjct: 183 YKLW 186
>gi|384099282|ref|ZP_10000371.1| hypothetical protein W5A_11384 [Imtechella halotolerans K1]
gi|383833263|gb|EID72728.1| hypothetical protein W5A_11384 [Imtechella halotolerans K1]
Length = 186
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 21/188 (11%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P+KG LLIA + G F R+V+L+ G G ILN+P + E+ V + +
Sbjct: 5 KPQKGHLLIAEPSIIGDVSFNRSVVLLADHSQEGSIGFILNKPLQFRLNEL---VPEISK 61
Query: 179 TFSDRPLFFGGPLEE-GLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
F ++ GGP+E+ L+ + P+ D + ++ G+Y+G V A + +
Sbjct: 62 PFK---VYNGGPVEQDNLYFIHRVPELIPDSI-------EISNGIYWGGDFNV--ALQQI 109
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAA-CSPSVIGLESGTLGLW-EELLW 293
++ + +D +FF G GW+ QL +E+ W V C S + ++ L W E++L
Sbjct: 110 NKDTIKEKDIKFFLGYSGWQASQLEDELSVNSWVVTENCYKSNL-IKKSALSFWKEKMLE 168
Query: 294 LMGRRKVW 301
L G +W
Sbjct: 169 LGGDYMLW 176
>gi|217073270|gb|ACJ84994.1| unknown [Medicago truncatula]
Length = 215
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 68 IDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLI 127
++ DWR FRA+L E ++ + + + + L KWAH I PE GC+L+
Sbjct: 93 VNLDWREFRAKLYRDEL---KEIADADTHKEGGALHISK-PLETKWAHPIPVPETGCVLV 148
Query: 128 ATEKLDGVHIFERTVILILSMEPMGPSGIIL----NRPSLMSIKEMRSTVLDAAGTFSDR 183
AT+KLDG+ FERTVIL+L P S IK+M D TFSD
Sbjct: 149 ATDKLDGIRTFERTVILLLRSGTRHPQERAFWNCHQSSSSQEIKQMNPKNHDLVTTFSDV 208
Query: 184 PLFF 187
F+
Sbjct: 209 SAFW 212
>gi|345867343|ref|ZP_08819357.1| hypothetical protein BZARG_2443 [Bizionia argentinensis JUB59]
gi|344048273|gb|EGV43883.1| hypothetical protein BZARG_2443 [Bizionia argentinensis JUB59]
Length = 186
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 15/185 (8%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P KG LLIA + G F R++IL+ G G ILN+P +I ++ + +
Sbjct: 5 KPFKGNLLIAEPTIIGDTSFNRSIILLADHTEEGSIGFILNKPLEYTISDL---IPEIKS 61
Query: 179 TFSDRPLFFGGPLEE-GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
TF ++ GGP+E+ L+ + E+ + V ++ G+Y+G AE++
Sbjct: 62 TFK---VYNGGPVEQDNLYFIHKV---PELIPNSV--EISLGIYWGGD--FNKVAELIAN 111
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG- 296
N + ++ RFF G GWE QLN+E++ W V +E W+E + G
Sbjct: 112 NELNEKNIRFFLGYSGWESNQLNDELKTNSWLVTENIYKQDIIEKDHETFWKEKMMEFGD 171
Query: 297 RRKVW 301
+W
Sbjct: 172 EYTIW 176
>gi|402493363|ref|ZP_10840116.1| hypothetical protein AagaZ_03766 [Aquimarina agarilytica ZC1]
Length = 185
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 20/189 (10%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ +P+ G +L+A + G F+R+V+LI G G I+N+P ++ ++ + +
Sbjct: 3 LTKPKTGSILVAEPSIIGDVSFQRSVVLIADHSGNGSIGFIMNKPLTYTLADVIPNITNE 62
Query: 177 AGTFSDRPLFFGGPLEE-GLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
F+ GGP+E+ L+ + P + V ++ +++G V A+
Sbjct: 63 FRIFN------GGPVEQDSLYFIHKIPHLIPNSV-------EICSNIFWGGDFNV--VAD 107
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEE-LL 292
++ + + PED +FF G GW +QLNEE+ + W VA S + T W E +L
Sbjct: 108 LIIKGEITPEDIKFFLGYSGWSSDQLNEEMNSNLW-VAVNSDLCNMISKPTQDFWREYML 166
Query: 293 WLMGRRKVW 301
L G +W
Sbjct: 167 DLGGEYLLW 175
>gi|332290942|ref|YP_004429551.1| hypothetical protein Krodi_0297 [Krokinobacter sp. 4H-3-7-5]
gi|332169028|gb|AEE18283.1| protein of unknown function DUF179 [Krokinobacter sp. 4H-3-7-5]
Length = 186
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 18/189 (9%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
I P KG LL+A + G F R+VIL+ G G ILN+P + + ++ + D
Sbjct: 2 IAYPTKGHLLVAEPSILGDTSFTRSVILLADHNDKGSVGFILNKPLDVKLSDLIEGIEDC 61
Query: 177 AGTFSDRPLFFGGPLE-EGLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
+ P++ GGP+E E L+ + P D + ++ G+Y+G A E
Sbjct: 62 -----EMPIYNGGPVEQENLYFIHTVPDLIEDSL-------EIASGIYWGG--NFERALE 107
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELL 292
++ + E +FF G GWE QL++EI W + L+ LW ++++
Sbjct: 108 LIMNEEICCEKIKFFLGYSGWESNQLDQEIVQNSWVILENDQQDALLKDNHTALWRDKII 167
Query: 293 WLMGRRKVW 301
+ G +W
Sbjct: 168 EIGGDYALW 176
>gi|428178357|gb|EKX47233.1| hypothetical protein GUITHDRAFT_137812 [Guillardia theta CCMP2712]
Length = 296
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 42/236 (17%)
Query: 72 WRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATEK 131
WR +R+RL+ AE P A+++ WAH + + E+GCL+I T K
Sbjct: 67 WREYRSRLIKAET--------PFWMRRASLH-------TGLWAHELWDIEQGCLMIETGK 111
Query: 132 L------DGVHIFERTVILILSM-EPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRP 184
D +E V+ +L + G G+ILN+ + +I + + F D
Sbjct: 112 PSTMRSDDFQRAYEGRVVFVLHHSQEHGSYGLILNKATPCTIGDFTEKL----PHFDDNT 167
Query: 185 LFFGGPLEEGLF-------LVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
+ +GG + L L + + VG E++++G++ G + A+++V++
Sbjct: 168 IHYGGEGHKALQGQVANRELHTIHSCSEVVGS----EEIIDGVFLGA--DLRHASKLVEQ 221
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLW 293
F+FF W+ QL E + G W AACS +I + WE+ LW
Sbjct: 222 KRAKASQFKFFYSATQWQPGQLQREFKEGRWVAAACSKELILYPN---SYWEKPLW 274
>gi|344204235|ref|YP_004789378.1| hypothetical protein [Muricauda ruestringensis DSM 13258]
gi|343956157|gb|AEM71956.1| protein of unknown function DUF179 [Muricauda ruestringensis DSM
13258]
Length = 186
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
+P+KG LL+A L G F R+V+LI G G ILN+P +I ++ S +
Sbjct: 4 QKPKKGNLLVAEPSLTGDISFNRSVVLIAEHNNEGSVGFILNKPLDYTICDLISDITIPF 63
Query: 178 GTFSDRPLFFGGPLEE-GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
F+ GGP+E+ L+ + E+ ++ + ++ +G+++G E++
Sbjct: 64 QVFN------GGPVEQDNLYFIHKV---PELIENSI--EISDGIFWGGN--FEMTVELIN 110
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELLWLM 295
+ +D RFF G GW QL++E+ + W V LE W E+++ L
Sbjct: 111 SGTITEQDIRFFLGYSGWGTSQLDQELSSKSWVVLPNEYESNILEKSAYAFWKEKMVELG 170
Query: 296 GRRKVW 301
G +W
Sbjct: 171 GDYLLW 176
>gi|189466057|ref|ZP_03014842.1| hypothetical protein BACINT_02422 [Bacteroides intestinalis DSM
17393]
gi|189434321|gb|EDV03306.1| putative ACR, COG1678 [Bacteroides intestinalis DSM 17393]
Length = 202
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 23/188 (12%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P +G +LI+ E +F R+VIL++ G G++LN+P +S+ + VL
Sbjct: 22 PSRGKVLIS-EPFLYDEMFGRSVILLVDHSTDGTMGLVLNKPLPLSLND----VLKEFKD 76
Query: 180 FSDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
S+ P++ GGPL + LF + + V + L G + + ++R
Sbjct: 77 ISNIPIYKGGPLSTDTLFYLH------------TLKDVEDSLQIGKGVYLNGDFDAIRRY 124
Query: 239 AVGPEDF----RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL-W 293
+ D RFF G GWE +QL +EI W + + S + + E G+ LW+ +L
Sbjct: 125 ILQGNDIDGKIRFFLGYSGWEHDQLCQEIEENTWLIGSTSIASLMNEKGSAELWKNVLGQ 184
Query: 294 LMGRRKVW 301
L G+ ++W
Sbjct: 185 LGGKYEIW 192
>gi|325279375|ref|YP_004251917.1| hypothetical protein Odosp_0657 [Odoribacter splanchnicus DSM
20712]
gi|324311184|gb|ADY31737.1| UPF0301 protein yqgE [Odoribacter splanchnicus DSM 20712]
Length = 196
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 17/183 (9%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
E G +LIA L G + F R+VI ++ + G G +LN+P + ++ V + AG
Sbjct: 19 EIGNILIAEPFLQGKY-FSRSVIFMVEHDEKGSIGFVLNKPMAYTTSDL---VTELAGL- 73
Query: 181 SDRPLFFGGPLEEG-LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+ P++ GGP+E+ L+ + ++ Q++ G+Y+G +++
Sbjct: 74 -EYPVYIGGPVEQNQLYYLHNHAEVEDA------LQIVPGIYWGGD--FSKLTRLLQEGK 124
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWE-ELLWLMGRR 298
+ P + RFF G GW+ QL+ E+ W V +P+ E LWE + L GR
Sbjct: 125 IQPGEVRFFAGYSGWDAGQLDRELDENSWMVGDITPARF-FEIPNDNLWEASMSGLGGRY 183
Query: 299 KVW 301
++W
Sbjct: 184 RIW 186
>gi|305666662|ref|YP_003862949.1| putative transcriptional regulator [Maribacter sp. HTCC2170]
gi|88707467|gb|EAQ99711.1| putative transcriptional regulator [Maribacter sp. HTCC2170]
Length = 186
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 19/187 (10%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P+KG LLIA L G F R+V+L+ G G ILN+P I ++ + +
Sbjct: 5 KPKKGKLLIAEPTLTGDVSFNRSVVLLAEHNEEGSVGFILNKPLEYHINDLVTEISIPLQ 64
Query: 179 TFSDRPLFFGGPLEE-GLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
F+ GGP+E+ L+ + P + + ++ +G+Y+G ++
Sbjct: 65 VFN------GGPVEQDNLYFIHKVPHLIDNSI-------EISDGIYWGGD--FEKTVNLI 109
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELLWL 294
+ +D RFF G GW QL+EE+ + W V ++ ++ W E+++ L
Sbjct: 110 NEGVIADQDIRFFLGYSGWSSLQLDEELSSKSWIVVPNEYESAIIQKSSVAFWKEKMVEL 169
Query: 295 MGRRKVW 301
G +W
Sbjct: 170 GGNYLLW 176
>gi|408370356|ref|ZP_11168133.1| hypothetical protein I215_05602 [Galbibacter sp. ck-I2-15]
gi|407744114|gb|EKF55684.1| hypothetical protein I215_05602 [Galbibacter sp. ck-I2-15]
Length = 186
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P+KG LLIA + G F R+V+L+ G G ILN+P + E+ V +
Sbjct: 6 PKKGHLLIAEPSIIGDVAFNRSVVLLAEHNNEGSIGFILNKPLEFDLSELIPEVNTSLRV 65
Query: 180 FSDRPLFFGGPLEE-GLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTK-ETVGCAAEMV 235
++ GGP+E+ L+ + P+ + + ++ G+Y+G ET+ E++
Sbjct: 66 YN------GGPVEQDNLYFIHKVPELISNSI-------EISNGIYWGGDFETI---VELI 109
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELLWL 294
+ D +FF G GW+ QL++E+ + W V+ ++ +L W E++L L
Sbjct: 110 NNKRIKDSDIKFFLGYSGWDTMQLDKELSSSSWVVSENRYKSNVIKKSSLSFWREKMLEL 169
Query: 295 MGRRKVW 301
G +W
Sbjct: 170 GGDYLLW 176
>gi|255531794|ref|YP_003092166.1| hypothetical protein Phep_1896 [Pedobacter heparinus DSM 2366]
gi|255344778|gb|ACU04104.1| protein of unknown function DUF179 [Pedobacter heparinus DSM 2366]
Length = 187
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 93/182 (51%), Gaps = 16/182 (8%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P G LLI+ L + F+R VILI + G G ILN+ S + +K++ + +A
Sbjct: 6 QPSLGRLLISEPFLMDPN-FKRAVILITDHQEEGTVGFILNQCSTLLLKDVIPELAEA-- 62
Query: 179 TFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK-ETVGCAAEMVKR 237
+ P++FGGP+E + D++G +++ +G+Y+G ET+ ++
Sbjct: 63 ---NFPVYFGGPVETDTIHFVHRCY-DKIGDG---QEIAKGIYWGGNFETLKA---LINS 112
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA-ACSPSVIGLESGTLGLWEELLWLMG 296
+ ++ +FF G GW KEQL +E++ W V+ A P V+ LW E++ +G
Sbjct: 113 KHIHEDEIKFFIGYSGWGKEQLKKEMKENTWIVSDAFHPDVV-FSGNEENLWREVIINLG 171
Query: 297 RR 298
+
Sbjct: 172 PK 173
>gi|86141623|ref|ZP_01060169.1| putative transcriptional regulator [Leeuwenhoekiella blandensis
MED217]
gi|85832182|gb|EAQ50637.1| putative transcriptional regulator [Leeuwenhoekiella blandensis
MED217]
Length = 187
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 12/187 (6%)
Query: 116 TIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLD 175
T +P+KG LLIA + G F R+V+L+ + G G ILN+P ++ E+ +
Sbjct: 2 TTKKPQKGKLLIAEPAIIGDVSFNRSVVLLANHNEDGSVGFILNKPLTFTLNELIPEI-- 59
Query: 176 AAGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
+ ++ GGP+E+ K D + +S ++ G+Y+G E++
Sbjct: 60 ---KGDEMQIYNGGPVEQDNLYFLHK-VPDLIPES---IEISNGIYWGGD--FDTVVELI 110
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELLWL 294
N + ++ RFF G GW+ QL+ E+ A W V + + LW E++L L
Sbjct: 111 TANKISTDEIRFFLGYSGWDCNQLDSELDANAWIVTDNTYDKEIINKCFPELWKEKMLEL 170
Query: 295 MGRRKVW 301
G +W
Sbjct: 171 GGEYLLW 177
>gi|227539639|ref|ZP_03969688.1| transcriptional regulator [Sphingobacterium spiritivorum ATCC
33300]
gi|300773785|ref|ZP_07083654.1| probable transcriptional regulator [Sphingobacterium spiritivorum
ATCC 33861]
gi|227240552|gb|EEI90567.1| transcriptional regulator [Sphingobacterium spiritivorum ATCC
33300]
gi|300759956|gb|EFK56783.1| probable transcriptional regulator [Sphingobacterium spiritivorum
ATCC 33861]
Length = 189
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSM-EPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
+P+KG LL+ +E F+R+VIL+ E G G ILN+ + + M S V
Sbjct: 6 QPQKGSLLV-SEPFMLDQNFKRSVILLADHNETDGTVGFILNQRTQL----MLSDVFQDV 60
Query: 178 GTFSDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
+D P++ GGP+E E LF + ++ SG E +++ +Y+G + + K
Sbjct: 61 EREADFPIYLGGPVECEALFFIHK---AYDLLLSG--EHIIDDVYWGGD--IELLLRLAK 113
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
+ ++ +FF G GW QL+ EI+ W V + + LW++ L MG
Sbjct: 114 EEKITSDEVKFFIGYSGWSPSQLDREIKENSWAVDNKFNKDLTFITDGEDLWKQALISMG 173
Query: 297 RR 298
++
Sbjct: 174 QK 175
>gi|297830642|ref|XP_002883203.1| hypothetical protein ARALYDRAFT_479495 [Arabidopsis lyrata subsp.
lyrata]
gi|297329043|gb|EFH59462.1| hypothetical protein ARALYDRAFT_479495 [Arabidopsis lyrata subsp.
lyrata]
Length = 1012
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 13/170 (7%)
Query: 104 PPQNSLGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEP-MGPSGIILN-RP 161
PP +SL T + + G +L+ATEKL F ++ ILI+ P G G+I N R
Sbjct: 843 PPTHSLT-----TAPQVKTGTILVATEKLAASQPFAKSKILIIKAGPEFGFLGLIFNKRI 897
Query: 162 SLMSIKEMRSTVLDAAGTFSDRPLFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGL 220
S ++ T A + PL FGGP+ + G+ L++ D ++ G+
Sbjct: 898 RWKSFPDLGET----AELLEETPLLFGGPVVDPGIPLLALTREKDSSTDHD-HPEISPGV 952
Query: 221 YFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270
YF ++V + +K + P ++ FF G W EQL +EI G W V
Sbjct: 953 YFLDHQSVARRIQELKSRELNPSEYWFFLGYSSWSYEQLFDEIGLGVWDV 1002
>gi|340619923|ref|YP_004738376.1| hypothetical protein zobellia_3960 [Zobellia galactanivorans]
gi|339734720|emb|CAZ98097.1| Conserved hypothetical protein [Zobellia galactanivorans]
Length = 186
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 19/187 (10%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P KG LLIA L G F R+V+L+ G G ILN+P SI ++ + +
Sbjct: 5 KPTKGKLLIAEPTLTGDVSFNRSVVLLAEHNDEGSVGFILNKPLEYSISDLITEIEIPFQ 64
Query: 179 TFSDRPLFFGGPLEE-GLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
++ GGP+E+ L+ + P+ + + ++ +G+Y+G +++
Sbjct: 65 VYN------GGPVEQDNLYFIHKVPELITNSI-------EISDGIYWGGD--FENTIQLI 109
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELLWL 294
+ + ED RFF G GW QL++E+ + W V + W E+++ L
Sbjct: 110 NKKVISEEDIRFFLGYSGWSSLQLDQELSSRSWIVVENDYESALIHKSADAFWKEKMVEL 169
Query: 295 MGRRKVW 301
G +W
Sbjct: 170 GGNYLLW 176
>gi|255534850|ref|YP_003095221.1| transcriptional regulator [Flavobacteriaceae bacterium 3519-10]
gi|255341046|gb|ACU07159.1| putative transcriptional regulator [Flavobacteriaceae bacterium
3519-10]
Length = 183
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 15/151 (9%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
KG ++I+T + G IF R+V+L++ G G+ILN+ + + M + +L+ G
Sbjct: 7 KGKIIISTPDISG-DIFSRSVVLVIDHNAEGAFGLILNKKN----QNMSARLLNIFGFRV 61
Query: 182 DRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
D ++ GGP+E + +F ++ G++V +S F ++ +G Y T++ A +++ +
Sbjct: 62 D--VYEGGPVENDKIFFINK---GEKVTES--FSEINDGFYL-TEDIENVVAAIIE-GRL 112
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
ED + F G GW QL EIR WTV
Sbjct: 113 SAEDIKVFSGYSGWAPGQLENEIRRKLWTVV 143
>gi|134103796|ref|YP_001109457.1| hypothetical protein SACE_7376 [Saccharopolyspora erythraea NRRL
2338]
gi|291005746|ref|ZP_06563719.1| hypothetical protein SeryN2_14594 [Saccharopolyspora erythraea NRRL
2338]
gi|133916419|emb|CAM06532.1| putative transcriptional regulator [Saccharopolyspora erythraea
NRRL 2338]
Length = 190
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
E G LL+A +L + F RTV+ I+ G G++LNRPS +S+ + VL G
Sbjct: 8 EPGTLLVAAPQLLDQN-FRRTVVFIIHHRAEGTLGVVLNRPSEVSVDD----VLPRWGPH 62
Query: 181 SDRP--LFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLY--FGTKETVGCAAEM 234
+ P LF GGP+E+ + L + + G D SG M G+ G + G A++
Sbjct: 63 ASEPQSLFVGGPVEQRTAICLAALRTGVDVGSVSG-----MIGVRGPIGLVDLDGDPADL 117
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPS 276
V R RFF G GW+ +QL EI G W V P
Sbjct: 118 VPRA----RGLRFFAGYAGWDADQLAGEIDRGDWLVVPALPD 155
>gi|326383885|ref|ZP_08205569.1| hypothetical protein SCNU_13168 [Gordonia neofelifaecis NRRL
B-59395]
gi|326197344|gb|EGD54534.1| hypothetical protein SCNU_13168 [Gordonia neofelifaecis NRRL
B-59395]
Length = 196
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 115 HTIHEPE--KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRST 172
+ ++PE G LLIA+ L G F RTVI ++ +P G G++LNR S ++ +
Sbjct: 6 YLTNQPEVSAGSLLIASTALTG-PTFARTVIYVIEHDPQGTLGVVLNRMSDAAVYNVLPA 64
Query: 173 VLDAAGTFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGC 230
+ A S R +F GGP+ L L K G D V K QV+ G V
Sbjct: 65 WTELAA--SPRAVFVGGPVATSSALCLGVAKTGVD-VAKQPQLHQVL-----GPVAMVDL 116
Query: 231 AAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEE 290
A+ + V R F G GW+ QL+EE+ G W VA P+ + L + +W+
Sbjct: 117 DADPDELAQVL-TGVRIFAGYAGWDAGQLDEELAEGSWIVAQGLPTDL-LSEPAVDVWQR 174
Query: 291 LL 292
+L
Sbjct: 175 VL 176
>gi|225155323|ref|ZP_03723816.1| protein of unknown function DUF179 [Diplosphaera colitermitum TAV2]
gi|224803930|gb|EEG22160.1| protein of unknown function DUF179 [Diplosphaera colitermitum TAV2]
Length = 188
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 83/173 (47%), Gaps = 21/173 (12%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+A L F RTV+L+ +P G GI+LNRP S+ + A G S+
Sbjct: 14 GSLLVAHPVLRDPG-FRRTVVLLSGHDPEGALGIVLNRPMNRSLGSLGGEF--ALGPLSE 70
Query: 183 RPLFFGGPLEEGLFLV---SPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
PLF GGP+ L+ + GG+ G F+ L FG AAE+V +
Sbjct: 71 VPLFKGGPVAPQQVLLCAWRSQLGGESEG----FQ-----LMFGIDPD--KAAELVGQPG 119
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
VG R F G GW QL +E+++ W V+ P+++ S + LW E+L
Sbjct: 120 VG---LRAFLGYAGWSAGQLEKELKSDTWVVSNLPPTLME-TSPDVRLWREVL 168
>gi|163756381|ref|ZP_02163495.1| putative transcriptional regulator [Kordia algicida OT-1]
gi|161323733|gb|EDP95068.1| putative transcriptional regulator [Kordia algicida OT-1]
Length = 189
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P KG LLIA + G F R+V+L+ G G ILN+P +++ ++ A
Sbjct: 5 KPNKGHLLIAEPSIIGDVSFNRSVVLLADHTQEGSIGFILNKPLNVNLSDLIPQFSSAKT 64
Query: 179 TFSDRPLFFGGPLEE-GLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
TF ++ GGP+E+ L+ + P + + ++ G+Y+G A+++
Sbjct: 65 TFK---VYNGGPVEQDNLYFIHKIPHLVPNSI-------EISLGIYWGG--DFSSIAKLL 112
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
+ + + +D +FF G GW QL+EE+ + W +
Sbjct: 113 EEDKLQQDDIKFFLGYSGWHANQLSEELNSNSWIIV 148
>gi|168015708|ref|XP_001760392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688406|gb|EDQ74783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1306
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGP-SGIILNRPSLMSIKEMRSTVLDAAG 178
P G LL+A+ LDG +F VILI+ G G++LN+P +S + T+
Sbjct: 1143 PTAGTLLLASPLLDGTSVFSGCVILIVHAHEHGDVRGLMLNKP--LSWDYVAKTI--GQD 1198
Query: 179 TFSDRPLFFGGPLEEG---LFLVSPKGGGDEVGKSGVFEQVMEGLYFG-TKETVGCAAEM 234
+ + PL FGGP+ E F+++ G D+ F +VM G+++G + ++V ++
Sbjct: 1199 SLHEAPLGFGGPVGEQSHPFFVLTKVPGLDD------FHEVMPGVFYGVSAKSVEDLIQL 1252
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESG 283
++ + D F GC W QL EE+ W V+ ++ SG
Sbjct: 1253 MQSGKLIEADVWVFLGCTAWSWFQLQEELAQQIWNVSGHYNGLVQWPSG 1301
>gi|395801989|ref|ZP_10481244.1| hypothetical protein FF52_08924 [Flavobacterium sp. F52]
gi|395436178|gb|EJG02117.1| hypothetical protein FF52_08924 [Flavobacterium sp. F52]
Length = 186
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 15/183 (8%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
+KG LLIA + G F R+VIL+ G G I+N+P +I ++ + DA
Sbjct: 7 KKGHLLIAEPSIIGDLSFNRSVILLADHNKEGSIGFIINKPLKYTINDLIPEI-DA---- 61
Query: 181 SDRPLFFGGPLEE-GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+ ++ GGP+E+ L+ + E+ + V ++ G+Y+G +++ +
Sbjct: 62 -NFKIYNGGPVEQDNLYFIH---NIPELIPNSV--EISNGIYWGGD--FESTKDLINNGS 113
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELLWLMGRR 298
+ + RFF G GWE+ QL E++ W +A + + T W E+++ L G
Sbjct: 114 ISKNNIRFFLGYTGWEENQLENEMQGNSWIIADNNYKNKIIGKSTTHFWKEQIIELGGDY 173
Query: 299 KVW 301
+W
Sbjct: 174 LIW 176
>gi|409124216|ref|ZP_11223611.1| hypothetical protein GCBA3_12821 [Gillisia sp. CBA3202]
Length = 186
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 15/185 (8%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+PEKG LL+A + G F R+V+L+ G G ILN+ ++K++ + +
Sbjct: 5 KPEKGLLLVAEPTIIGDTSFNRSVVLLAEHSESGSIGFILNKILDFTLKDL---IPELKK 61
Query: 179 TFSDRPLFFGGPLEE-GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
+F ++ GGP+E+ L+ + D + +S ++ G+Y+G +++
Sbjct: 62 SFK---IYNGGPVEQDNLYFIHKVP--DLIPESI---EIANGIYWGG--NFEAVKQLILS 111
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELLWLMG 296
+ + ++ RFF G GW+ EQL EE+ + W + S +E W ++++ L G
Sbjct: 112 DQITDKEIRFFLGYSGWDSEQLTEELNSNSWIITEHQDSKDIIERPYRSFWKDKMIELGG 171
Query: 297 RRKVW 301
+W
Sbjct: 172 NYMLW 176
>gi|380695232|ref|ZP_09860091.1| putative transcriptional regulator [Bacteroides faecis MAJ27]
Length = 196
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 15/180 (8%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P +G +LI+ L F R+VIL++ G G+I+N+P + + + ++
Sbjct: 17 PSRGKILISEPFLRDA-TFGRSVILLIDHTDEGTMGLIINKPLPIFVND----IIKEFKY 71
Query: 180 FSDRPLFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
+D PL+ GGP+ + LF + SG V +GLY + +++ N
Sbjct: 72 INDIPLYKGGPVATDTLFYLHTLAN-----ISGAI-PVSKGLYLNG-DFDEIKKYILQGN 124
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRR 298
V + RFF G CGWE EQLN+E++ W V+ + + S T +W+E L +G +
Sbjct: 125 KVD-QHIRFFLGYCGWEGEQLNDELKENTWLVSKEDKDYL-MNSDTKDMWKEALEKLGSK 182
>gi|363581589|ref|ZP_09314399.1| hypothetical protein FbacHQ_08908 [Flavobacteriaceae bacterium
HQM9]
Length = 185
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 19/183 (10%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ +P+ G +++A + G F+R+V+LI G G I+N+P ++ ++ + +
Sbjct: 3 LTKPKTGSVIVAEPSIIGDVSFQRSVVLIADHSDNGSIGFIMNKPLTYTLADVIPNITNE 62
Query: 177 AGTFSDRPLFFGGPLEE-GLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
F+ GGP+E+ L+ + P + V ++ +++G V A+
Sbjct: 63 FRIFN------GGPVEQDSLYFIHKIPHLIPNSV-------EICSSIFWGGDFNV--VAD 107
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLW 293
++ + V PED +FF G GW +QLNEE+ + W V S + T W E +
Sbjct: 108 LIMKGEVLPEDIKFFLGYSGWSSDQLNEEMNSNLW-VEVNSNLCDMISKPTQDFWREYMI 166
Query: 294 LMG 296
+G
Sbjct: 167 DLG 169
>gi|453362515|dbj|GAC81552.1| hypothetical protein GM1_038_00050 [Gordonia malaquae NBRC 108250]
Length = 197
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 88/194 (45%), Gaps = 17/194 (8%)
Query: 110 GDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM 169
G ++ H E G LLIA+ L G F RTV+ ++ + G G++LNR S ++ +
Sbjct: 4 GGEFIHDRPEVAPGALLIASTALSG-ETFVRTVVYVIEHDEQGTLGVVLNRMSDAAVHNI 62
Query: 170 RSTVLDAAGTFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKET 227
D A S R +F GGP+ L L K G D V K QV+ G
Sbjct: 63 LPRWADLAA--SPRAVFVGGPVGTSSALCLGVAKAGVD-VAKQPKLHQVL-----GPVAM 114
Query: 228 VGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGL 287
V A+ + A R F G GWE QL++E+ W VA P+ + L ++ +
Sbjct: 115 VDLDADP-EEMATVLTGVRIFAGYAGWEAGQLDDELAESSWIVAPGLPTDL-LSEPSVDI 172
Query: 288 WEELLWLMGRRKVW 301
W+ +L +R+ W
Sbjct: 173 WQRVL----QRQPW 182
>gi|150026046|ref|YP_001296872.1| transcriptional regulator [Flavobacterium psychrophilum JIP02/86]
gi|39653975|gb|AAR29586.1| hypothetical protein [Flavobacterium psychrophilum]
gi|149772587|emb|CAL44070.1| Putative transcriptional regulator [Flavobacterium psychrophilum
JIP02/86]
Length = 186
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 24/178 (13%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P+KG LL+A + G F R+V+L+ G G ILN+P +I ++ + + +
Sbjct: 5 KPKKGHLLVAEPSITGDLSFNRSVVLLADHNCEGSVGFILNKPLGYTINDL---IPEISA 61
Query: 179 TFSDRPLFFGGPLEE-GLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGC---AA 232
F ++ GGP+E+ L+ + P+ + + ++ EG+Y+G GC
Sbjct: 62 RFK---VYNGGPIEQDNLYFIHNIPQLIPNSI-------EIAEGIYWG-----GCFDSTR 106
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEE 290
+++ + + + RFF G GW+ QL EE+ + W ++ + + + LW E
Sbjct: 107 DLINQGKITQNNIRFFLGYSGWDAAQLQEELESNSWIISENNLHNKIIGKSSTDLWRE 164
>gi|375011294|ref|YP_004988282.1| putative transcriptional regulator [Owenweeksia hongkongensis DSM
17368]
gi|359347218|gb|AEV31637.1| putative transcriptional regulator [Owenweeksia hongkongensis DSM
17368]
Length = 187
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 14/157 (8%)
Query: 115 HTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVL 174
+ +++P+KG LL+A E G F+RTV+L+ G G ++N+P +++ E V+
Sbjct: 3 NVLNKPQKGSLLVA-EPFLGDTNFDRTVVLLTEHNEEGSVGFVINKPLELTLDE----VV 57
Query: 175 DAAGTFSDRPLFFGGPLEE-GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
+F R ++ GGP+++ LF + KG G E + + LY+G + E
Sbjct: 58 IGFPSFESR-IYHGGPVQQDSLFFLHNKGNLIPGG-----ELIKDDLYWGGD--LEPLKE 109
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270
M+K + E+ RFF G GW QL+ EI W V
Sbjct: 110 MIKLGLIDQENIRFFLGYSGWGGGQLDLEIDEKSWLV 146
>gi|336173284|ref|YP_004580422.1| hypothetical protein [Lacinutrix sp. 5H-3-7-4]
gi|334727856|gb|AEH01994.1| protein of unknown function DUF179 [Lacinutrix sp. 5H-3-7-4]
Length = 186
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 19/187 (10%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P KG LL+A + G F R+++L+ G G ILN+P +I ++ +
Sbjct: 5 KPTKGDLLVAEPSIIGDLSFNRSIVLLTDHSNEGSIGFILNKPLDYTISDLIPEIETPFK 64
Query: 179 TFSDRPLFFGGPLEE-GLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
++ GGP+E+ L+ + P + + ++ G+Y+G ++++
Sbjct: 65 VYN------GGPVEQDNLYFIHKVPHLIPNSI-------EISLGIYWGGD--FSEVSKLI 109
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELLWL 294
N + +D +FF G GWE QL EE+++ W V +E W E+++ L
Sbjct: 110 TENKISEKDIKFFLGYSGWEYNQLEEELKSNAWVVTKNIHKKAIIEKDYEFFWKEKMVEL 169
Query: 295 MGRRKVW 301
G +W
Sbjct: 170 GGNYSIW 176
>gi|91201532|emb|CAJ74592.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 188
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 10/158 (6%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
KG +LIA + + F +TV+LI G G+ILN+ + K V A
Sbjct: 7 KGSILIANPQGTDPN-FMQTVVLICEHSKRGTLGLILNKT--LGKKGQEIFVSSANTKTK 63
Query: 182 DRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
D+ +FFGGP++ +F + G+ ++ ++ EG+Y G+ + GC + R V
Sbjct: 64 DKEIFFGGPVDTNNMFYLH----GNFKNETHNCVKICEGVYLGSNQ--GCFNAFMSRKNV 117
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
FR + GC W QL EI WTV + ++
Sbjct: 118 SDNIFRLYLGCACWSGGQLESEIETKCWTVGTATEKMV 155
>gi|120435796|ref|YP_861482.1| hypothetical protein GFO_1442 [Gramella forsetii KT0803]
gi|117577946|emb|CAL66415.1| conserved hypothetical protein [Gramella forsetii KT0803]
Length = 186
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 88/187 (47%), Gaps = 19/187 (10%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P KG LL+A + G F R+V+L+ G G ILN+ ++K++ + + G
Sbjct: 5 KPTKGHLLVAEPSIIGDVSFNRSVVLLADHSDSGSVGFILNKILDFTLKDL---IPEVKG 61
Query: 179 TFSDRPLFFGGPLEE-GLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
F ++ GGP+E+ L+ + P D + ++ G+Y+G V ++
Sbjct: 62 DFK---VYNGGPVEQDNLYFIHTIPDLIPDSI-------EIAHGIYWGGNFEV--VMNLI 109
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELLWL 294
+ ++ + +FF G GW+ QL++E+ + W + A LE W +++L L
Sbjct: 110 AKESIDDKQIKFFLGYSGWDANQLDDELNSRSWIITANENDKDLLEKPYNSFWKDKMLEL 169
Query: 295 MGRRKVW 301
G +W
Sbjct: 170 GGEYMLW 176
>gi|302038513|ref|YP_003798835.1| hypothetical protein NIDE3217 [Candidatus Nitrospira defluvii]
gi|300606577|emb|CBK42910.1| conserved protein of unknown function DUF179 [Candidatus Nitrospira
defluvii]
Length = 186
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 76/171 (44%), Gaps = 11/171 (6%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
KG LL+A L+ + F +TV+L+ P G G+I+NRP+ MSI E V G
Sbjct: 7 KGILLVAAPALNDPN-FRQTVVLLCEHGPEGALGVIVNRPTAMSISEALPQVPILEG--Q 63
Query: 182 DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
L+ GGP++ ++ + VF+ V G G E + E + G
Sbjct: 64 PHVLYSGGPVQTNQVMMLYRINQTPENSHQVFDGVCLG---GDLEIM----ERILMEQPG 116
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
E FR + G GW QL E++ G W PS++ E +W ++
Sbjct: 117 KESFRAYLGYSGWGPGQLESEMQTGSWITLPADPSIV-FEKEPTRIWSDIF 166
>gi|85817709|gb|EAQ38883.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
Length = 186
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P KG LL+A + G F R+VIL+ G G ILN+P +++ ++ + D
Sbjct: 5 PTKGQLLVAEPSVLGDVSFTRSVILLADHNEEGSVGFILNKPLDVTLADLIEGMEDC--- 61
Query: 180 FSDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
+ P++ GGP+E E L+ + E+ + +++ G+Y+G A +++
Sbjct: 62 --EMPIYNGGPVEQENLYFLHT---APELIEGS--QEISSGIYWGGD--FQRAVDLILAK 112
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELLWLMGR 297
+ ++ +FF G GW +QL++EI W + L+S L LW ++L L G
Sbjct: 113 KISCDNIKFFLGYSGWGSKQLDQEISEHSWVITNNDLCKELLKSDHLALWSDKLRELGGS 172
Query: 298 RKVW 301
+W
Sbjct: 173 YALW 176
>gi|374384976|ref|ZP_09642487.1| hypothetical protein HMPREF9449_00873 [Odoribacter laneus YIT
12061]
gi|373227034|gb|EHP49355.1| hypothetical protein HMPREF9449_00873 [Odoribacter laneus YIT
12061]
Length = 196
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G +LIA L+G + F R V+ I+ + G G +LN+P + ++ V + G D
Sbjct: 21 GDILIAEPFLEGRY-FSRAVVYIVEHDEKGSIGFVLNKPISYTTSDL---VTELKGM--D 74
Query: 183 RPLFFGGPLEEG--LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
P++ GGP+E+ +L + D + + +G+Y+G +++ V
Sbjct: 75 FPVYLGGPVEQNQLYYLHTHSELPDAL-------HIDDGIYWGGDFV--HLTRLIREGKV 125
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLW-LMGRRK 299
PE+ RFF G GWE QL +E+ W V + + L+ LWE+ + L GR K
Sbjct: 126 LPEEIRFFAGYSGWEAGQLQKELEENSWMVGNMERTRL-LQLPWSELWEKSMSDLGGRYK 184
Query: 300 VW 301
+W
Sbjct: 185 IW 186
>gi|159468257|ref|XP_001692299.1| hypothetical protein CHLREDRAFT_145791 [Chlamydomonas reinhardtii]
gi|158278485|gb|EDP04249.1| predicted protein [Chlamydomonas reinhardtii]
Length = 234
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 90/198 (45%), Gaps = 25/198 (12%)
Query: 113 WAHTIHEPEKGCLLI----ATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSI-K 167
WAH PE G L+I A E L +F+ VI + + P G GIILNRP+ M + +
Sbjct: 33 WAHGTPRPEVGGLVISSIEAPELLKDDRLFQ-LVIFLTTHGPDGSVGIILNRPTGMVLGR 91
Query: 168 EMRSTVLDAAG------TFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLY 221
+ L+ G F D ++ GG + + + G + QV+ G+Y
Sbjct: 92 KPGGLPLELGGPVPIQRVFQDNMVYCGGFTAQQVIHIMH---GHRLQNC---VQVVPGVY 145
Query: 222 FGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLE 281
+ A E V + DF+FF G W +L ++ G W AACS S++ L+
Sbjct: 146 MAGEV---AATEAVSGGRLPAGDFKFFSGAITWAPGELEAQMDRGAWYTAACSRSLV-LK 201
Query: 282 SGT---LGLWEELLWLMG 296
S + LW E+L LMG
Sbjct: 202 SALQLPVPLWREVLQLMG 219
>gi|298709124|emb|CBJ31070.1| putative transcriptional regulator [Ectocarpus siliculosus]
Length = 455
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 120 PEKGCLLIATEKLDGVH----IFERTVILILSMEPMGPSGIILNRPSLMSIKEMR----- 170
P KG LI + L ++ +F R+V+L++ P+G G+++N+ +++E
Sbjct: 250 PAKGVYLI-SHPLSFLYAPEEMFHRSVVLLVDHSPLGSYGLVVNKDKGETLEEALCEDAL 308
Query: 171 STVLDAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGC 230
DA P+ GGP+ L + P EVG + E + ++F K +
Sbjct: 309 PLASDALQQVLKNPVRVGGPVMSRLAWLHPH---KEVGGVPLAEGAEKPVFFCGK--MEK 363
Query: 231 AAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEE 290
AAE++ + A P DF G W+ QL E+ G W + A +P+ L G +W +
Sbjct: 364 AAELLTKGAAKPADFSLVVGASAWDAGQLQGELNHGLW-IMAKAPASFALAGGE-DMWRD 421
Query: 291 LLWLMG 296
+L MG
Sbjct: 422 MLEAMG 427
>gi|399027331|ref|ZP_10728868.1| putative transcriptional regulator [Flavobacterium sp. CF136]
gi|398075208|gb|EJL66332.1| putative transcriptional regulator [Flavobacterium sp. CF136]
Length = 186
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 15/183 (8%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
+KG LLIA + G F R+VIL+ G G I+N+P +I ++ + DA+
Sbjct: 7 KKGHLLIAEPSIIGDLSFNRSVILLADHNKEGSIGFIINKPLKYTINDLIPEI-DAS--- 62
Query: 181 SDRPLFFGGPLEE-GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
++ GGP+E+ L+ + E+ + V ++ G+Y+G +++ +
Sbjct: 63 --FKIYNGGPVEQDNLYFIH---NIPELIPNSV--EISNGIYWGGD--FESTKDLINDGS 113
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELLWLMGRR 298
+ + RFF G GW++ QL E++ W +A + + T W E+++ L G
Sbjct: 114 INKNNIRFFLGYTGWDENQLENEMQGNSWIIADNNYKNKIIGKSTTHFWKEQIIELGGDY 173
Query: 299 KVW 301
+W
Sbjct: 174 LIW 176
>gi|408672782|ref|YP_006872530.1| UPF0301 protein yqgE [Emticicia oligotrophica DSM 17448]
gi|387854406|gb|AFK02503.1| UPF0301 protein yqgE [Emticicia oligotrophica DSM 17448]
Length = 186
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 16/178 (8%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P KG +LIA E G FER+V+L+ +G G++LN+ + + + ++ +
Sbjct: 8 PTKGKVLIA-EPFLGDKNFERSVVLLCEYNNLGAFGLVLNQLTNLKLDDVIENI------ 60
Query: 180 FSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYF-GTKETVGCAAEMVKRN 238
+++ PL+ GGP+E+ + G DE+ S ++ G+Y+ G E V + K
Sbjct: 61 YAELPLYLGGPVEQNTLHFIHRLG-DEIEGS---VELGNGIYWSGDFEQVKTLINISK-- 114
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
+ D R F G GW QL E+ W V+ +I E+ + W E+L MG
Sbjct: 115 -ISENDIRLFVGYSGWGAGQLEGELMQDSWIVSDIDAGLI-FETPSNNFWREVLKRMG 170
>gi|86133083|ref|ZP_01051665.1| conserved hypothetical protein [Polaribacter sp. MED152]
gi|85819946|gb|EAQ41093.1| conserved hypothetical protein [Polaribacter sp. MED152]
Length = 185
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 18/186 (9%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
EP KG LLIA + F R +ILI G ILNRP +K++ + D
Sbjct: 5 EPLKGRLLIAEPSILNDSSFNRAIILITEYTENNSVGFILNRPLDYVLKDL---IPDIDS 61
Query: 179 TFSDRPLFFGGPLEE-GLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
F+ ++ GGP+E+ L+ V P+ D + + +G+++G +++
Sbjct: 62 NFT---VYQGGPVEQDNLYFVHKVPELIPDSIA-------ISDGIFWGG--NFDSLKQLL 109
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLM 295
+ D RFF G GW K QL +EI W ++ + I E+ ++LL
Sbjct: 110 NSGELSSTDIRFFLGYSGWGKNQLKDEININSWFISENNIQNIFSENEDTFWRKKLLEKG 169
Query: 296 GRRKVW 301
G K+W
Sbjct: 170 GDYKLW 175
>gi|406673280|ref|ZP_11080503.1| hypothetical protein HMPREF9700_01045 [Bergeyella zoohelcum CCUG
30536]
gi|423316380|ref|ZP_17294285.1| hypothetical protein HMPREF9699_00856 [Bergeyella zoohelcum ATCC
43767]
gi|405583430|gb|EKB57370.1| hypothetical protein HMPREF9699_00856 [Bergeyella zoohelcum ATCC
43767]
gi|405586466|gb|EKB60226.1| hypothetical protein HMPREF9700_01045 [Bergeyella zoohelcum CCUG
30536]
Length = 182
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 20/178 (11%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT-- 179
KG LLI+ + G IF R V+LI+ G G+ILN+ R+ L +A T
Sbjct: 6 KGKLLISKPSISG-DIFSRAVVLIIEHNEEGAFGLILNK---------RNPALSSAATGL 55
Query: 180 -FSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
+ ++ GGP+E G KG V + E Y T+E +++ RN
Sbjct: 56 LHTSIDVYEGGPVEIGKIFFIVKG----VPHRDSHLALNENFYL-TQEMENIIDDIL-RN 109
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
+ +D + F G GWE+ QL+ E+ +W + PS LW+ L+ +G
Sbjct: 110 QLNTDDIKVFTGYSGWERNQLDNEVANNFWNIID-DPSFDYTAQEDDTLWKNLMQNLG 166
>gi|146297906|ref|YP_001192497.1| hypothetical protein Fjoh_0140 [Flavobacterium johnsoniae UW101]
gi|146152324|gb|ABQ03178.1| protein of unknown function DUF179 [Flavobacterium johnsoniae
UW101]
Length = 209
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 15/183 (8%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
+KG LLIA + G F R+VIL+ G G I+N+P +I ++ + DA
Sbjct: 30 KKGHLLIAEPSIIGDLSFNRSVILLADHNKEGSIGFIINKPLKYTINDLIPEI-DA---- 84
Query: 181 SDRPLFFGGPLEE-GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+ ++ GGP+E+ L+ + D + S ++ G+Y+G +++ +
Sbjct: 85 -NFKIYNGGPVEQDNLYFI--HNIPDLIPNS---VEISNGIYWGGD--FESTKDLINDGS 136
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELLWLMGRR 298
+ + RFF G GW++ QL E++ W +A + + T W E+++ L G
Sbjct: 137 INKNNIRFFLGYTGWDENQLENEMQGNSWIIADNNYKNKIIGKSTTHFWKEQIIELGGDY 196
Query: 299 KVW 301
+W
Sbjct: 197 LIW 199
>gi|359299988|ref|ZP_09185827.1| hypothetical protein Haemo_07547 [Haemophilus [parainfluenzae] CCUG
13788]
gi|402305434|ref|ZP_10824493.1| hypothetical protein HMPREF1128_1620 [Haemophilus sputorum HK 2154]
gi|400376547|gb|EJP29434.1| hypothetical protein HMPREF1128_1620 [Haemophilus sputorum HK 2154]
Length = 186
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 15/183 (8%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE----MRSTVL 174
E +G LIAT ++D + F+RTV+ I G G+++N P+ +S+ E M +
Sbjct: 3 ENLQGKFLIATPEMDDDY-FDRTVVYICEHNQNGAMGVVINTPTDLSVLELLTRMDFQMA 61
Query: 175 DAAGTFSDRPLFFGGPLEEGL-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
+ D+ + GGP+ + F++ K + + V +++M ++ G
Sbjct: 62 NQREYTKDQMVLSGGPMNQDRGFIIHTKTAMNFLHSYKVTDEIMLTTSGDILDSFGTP-- 119
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLW 293
+ P+ F GC W+ QL +EI +W V+ S ++ E+G L W E
Sbjct: 120 ------LSPKHFIVCLGCATWQSAQLEQEIGQNFWLVSEASHRIL-FETGYLDRWNEANE 172
Query: 294 LMG 296
L+G
Sbjct: 173 LLG 175
>gi|443244766|ref|YP_007377991.1| putative transcriptional regulator [Nonlabens dokdonensis DSW-6]
gi|442802165|gb|AGC77970.1| putative transcriptional regulator [Nonlabens dokdonensis DSW-6]
Length = 186
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 90/184 (48%), Gaps = 15/184 (8%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
PE+G LL++ + G H F R+V+L+ G G ILN+P ++ ++ +
Sbjct: 6 PERGNLLVSEPSIIGDHSFSRSVVLLTEFNTDGVVGFILNKPLDCTLDQLIPEI------ 59
Query: 180 FSDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
++ ++ GGP++ + L+ + + + S + E +G+Y+G ++++
Sbjct: 60 STELEVYQGGPVDTDNLYFL--HNIPELIPDSHLIE---DGIYWGGD--FHAVSDLLNNG 112
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELLWLMGR 297
+ ++ +FF G GWE QL+EE+ W V + S L + +W +++ L G
Sbjct: 113 LISGDEIKFFLGYSGWETNQLSEELAGNSWVVVENTDSKNILSNNMHDIWKKKMKKLGGE 172
Query: 298 RKVW 301
++W
Sbjct: 173 YELW 176
>gi|379731820|ref|YP_005324016.1| hypothetical protein SGRA_3716 [Saprospira grandis str. Lewin]
gi|378577431|gb|AFC26432.1| hypothetical protein SGRA_3716 [Saprospira grandis str. Lewin]
Length = 181
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 17/180 (9%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
+ G LL+A E H F+R VIL+ E G G +LN+P + IK++ + D +
Sbjct: 4 QAGRLLLA-EPFMSDHHFKRAVILLCDHEREGSVGFVLNKPMGLDIKDLVNDFPDFSAE- 61
Query: 181 SDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYF-GTKETVGCAAEMVKRN 238
+ FGGP++ + + V KG E+ + + ++ EGLY+ G E + ++++
Sbjct: 62 ----VHFGGPVQTDSIHYVHTKG---ELLEGAM--KIEEGLYWGGNYEQLKV---LIRQG 109
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRR 298
+ D FF G GW + QL EEI W +A + I L LW+ +L +G R
Sbjct: 110 LLEQNDITFFVGYSGWGEGQLQEEIEVQTWILAESDRNYIFQPQNEL-LWKSVLENLGDR 168
>gi|334185477|ref|NP_001189936.1| uncharacterized protein [Arabidopsis thaliana]
gi|332642766|gb|AEE76287.1| uncharacterized protein [Arabidopsis thaliana]
Length = 1058
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 22/199 (11%)
Query: 75 FRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATEKLDG 134
R R A +V QV S PP +SL + + + G +L+ATEKL
Sbjct: 869 LRNREPAEREVNHDQVNSQS---------PPIHSLTNA-----PQVKTGTVLVATEKLAA 914
Query: 135 VHIFERTVILILSMEP-MGPSGIILN-RPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPL- 191
F ++ ILI+ P +G G+I N R S ++ T A + PL FGGP+
Sbjct: 915 SLTFAKSKILIIKAGPEIGFLGLIFNKRIRWKSFPDLGET----AELLKETPLSFGGPVV 970
Query: 192 EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGC 251
+ G+ L++ D + ++ G+YF ++V + +K + P ++ FF G
Sbjct: 971 DPGIPLLALTRERDS-STNHDHPEISPGVYFLDHQSVARRIQELKSRELNPSEYWFFLGY 1029
Query: 252 CGWEKEQLNEEIRAGYWTV 270
W EQL +EI G W V
Sbjct: 1030 SSWSYEQLFDEIGLGVWDV 1048
>gi|240255369|ref|NP_566646.5| uncharacterized protein [Arabidopsis thaliana]
gi|332642765|gb|AEE76286.1| uncharacterized protein [Arabidopsis thaliana]
Length = 1059
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 22/199 (11%)
Query: 75 FRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATEKLDG 134
R R A +V QV S PP +SL + + + G +L+ATEKL
Sbjct: 870 LRNREPAEREVNHDQVNSQS---------PPIHSLTNA-----PQVKTGTVLVATEKLAA 915
Query: 135 VHIFERTVILILSMEP-MGPSGIILN-RPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPL- 191
F ++ ILI+ P +G G+I N R S ++ T A + PL FGGP+
Sbjct: 916 SLTFAKSKILIIKAGPEIGFLGLIFNKRIRWKSFPDLGET----AELLKETPLSFGGPVV 971
Query: 192 EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGC 251
+ G+ L++ D + ++ G+YF ++V + +K + P ++ FF G
Sbjct: 972 DPGIPLLALTRERDS-STNHDHPEISPGVYFLDHQSVARRIQELKSRELNPSEYWFFLGY 1030
Query: 252 CGWEKEQLNEEIRAGYWTV 270
W EQL +EI G W V
Sbjct: 1031 SSWSYEQLFDEIGLGVWDV 1049
>gi|329964830|ref|ZP_08301838.1| Uncharacterized ACR [Bacteroides fluxus YIT 12057]
gi|328524471|gb|EGF51539.1| Uncharacterized ACR [Bacteroides fluxus YIT 12057]
Length = 197
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 17/185 (9%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P +G +LI+ E HIF R+VIL++ G G++LN+P + + + +L
Sbjct: 17 PAQGKILIS-EPFLCDHIFGRSVILLVDHTKEGTMGLVLNKPLPLFLND----ILQDFNY 71
Query: 180 FSDRPLFFGGPLEEG--LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
+ P++ GGPL +L + +G D + + GLY E + +
Sbjct: 72 QENIPIYKGGPLSTDTLFYLHTLEGITDSL-------PISNGLYLNGD--FNAIKEYILQ 122
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGR 297
RFF G GWE EQL+ E+ W V+ S I E+ LW+ L +G
Sbjct: 123 GNPIKGKIRFFLGYSGWEYEQLHRELEENTWLVSTESKDTIMNENAGTELWKNSLGRLGS 182
Query: 298 R-KVW 301
+ ++W
Sbjct: 183 KYELW 187
>gi|225010795|ref|ZP_03701263.1| protein of unknown function DUF179 [Flavobacteria bacterium
MS024-3C]
gi|225005003|gb|EEG42957.1| protein of unknown function DUF179 [Flavobacteria bacterium
MS024-3C]
Length = 186
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 21/186 (11%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
+KG +L+A L G F R VILI G G ILN+P ++ E+ +
Sbjct: 7 QKGHVLVAEPALTGDVSFSRAVILIAEHNLKGSVGFILNKPLSYTLDELIEDI------H 60
Query: 181 SDRPLFFGGPLEE-GLFLV--SPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
P+F GGP+E+ ++ + +PK + ++ +G+Y+G + A +++
Sbjct: 61 FPYPVFNGGPVEQDNIYFIHTAPKVIPGSI-------EISDGIYWGGDFSALLKA--LEQ 111
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYW-TVAACSPSVIGLESGTLGLWEE-LLWLM 295
N + +FF G GW ++QL+ EI+ W TV S + ++ LW++ + L
Sbjct: 112 NLIAENQIKFFLGYTGWSQKQLDGEIKTNSWITVKNLDISTL-VKQENHSLWKDSIKALG 170
Query: 296 GRRKVW 301
G+ +W
Sbjct: 171 GKYLIW 176
>gi|124003386|ref|ZP_01688236.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
gi|123991484|gb|EAY30915.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
Length = 185
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
+KG LLIA E G FER+V+L+ G G +LN+ + +S+K++ +
Sbjct: 7 KKGDLLIA-EPFLGDRNFERSVVLLCEHNDKGSFGFVLNQKANVSLKDVLEEDI-----L 60
Query: 181 SDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVME---GLYFGTKETVGCAAEMVKR 237
D PLF GGP+++ + +F+ +E G+++G A ++
Sbjct: 61 EDVPLFVGGPVQQDTLHFIHR-------TPDLFDNTVEIAKGIFWGGDYEQLKA--YLRV 111
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
+ +D RFF G GW +EQL++E+ W V+A I ++ W +L MG
Sbjct: 112 GKLQEQDIRFFLGYSGWGEEQLDQELGQNSWVVSASDAKFI-FDTEPDQFWRGVLRRMG 169
>gi|11994189|dbj|BAB01292.1| unnamed protein product [Arabidopsis thaliana]
Length = 963
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 22/199 (11%)
Query: 75 FRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATEKLDG 134
R R A +V QV S PP +SL + + + G +L+ATEKL
Sbjct: 774 LRNREPAEREVNHDQVNSQS---------PPIHSLTNA-----PQVKTGTVLVATEKLAA 819
Query: 135 VHIFERTVILILSMEP-MGPSGIILN-RPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPL- 191
F ++ ILI+ P +G G+I N R S ++ T A + PL FGGP+
Sbjct: 820 SLTFAKSKILIIKAGPEIGFLGLIFNKRIRWKSFPDLGET----AELLKETPLSFGGPVV 875
Query: 192 EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGC 251
+ G+ L++ D + ++ G+YF ++V + +K + P ++ FF G
Sbjct: 876 DPGIPLLALTRERDS-STNHDHPEISPGVYFLDHQSVARRIQELKSRELNPSEYWFFLGY 934
Query: 252 CGWEKEQLNEEIRAGYWTV 270
W EQL +EI G W V
Sbjct: 935 SSWSYEQLFDEIGLGVWDV 953
>gi|284038502|ref|YP_003388432.1| hypothetical protein Slin_3626 [Spirosoma linguale DSM 74]
gi|283817795|gb|ADB39633.1| protein of unknown function DUF179 [Spirosoma linguale DSM 74]
Length = 186
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 32/181 (17%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
+ G LLIA E G + FER+V+L+ +G G++LN+ + + + ++ +
Sbjct: 9 QNGDLLIA-EPFMGDNNFERSVVLVCEHNAVGTFGLVLNQQTDIQLGDVIEDI------H 61
Query: 181 SDRPLFFGGPLEEG-LFLVSPKGG--------GDEVGKSGVFEQVMEGLYFGTKETVGCA 231
+D PLF GGP+++ L + + D + SG F+Q+ G+ GT
Sbjct: 62 TDLPLFVGGPVQQNTLHFIHRRPDLIDNSICVVDGLYWSGDFDQIKRGVNLGT------- 114
Query: 232 AEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEEL 291
+ D RFF G GW + QL+ E+ W ++ + E+ T W E+
Sbjct: 115 --------LTERDIRFFIGYSGWNEGQLDSELLQKAWIISRTKADFL-FETPTTEFWREV 165
Query: 292 L 292
L
Sbjct: 166 L 166
>gi|375256545|ref|YP_005015712.1| hypothetical protein BFO_3057 [Tannerella forsythia ATCC 43037]
gi|363406893|gb|AEW20579.1| hypothetical protein BFO_3057 [Tannerella forsythia ATCC 43037]
Length = 197
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 14/187 (7%)
Query: 112 KWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRS 171
K H PEKG +LI+ L + F+R+V+L++ + G G ++N+P+ + + +
Sbjct: 9 KIKHNDLRPEKGKILISEPFLQDAY-FQRSVVLLVEHDHNGSMGFVVNKPTGLIVNDF-- 65
Query: 172 TVLDAAGTFSDRPLFFGGPLEEG-LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGC 230
F P++ GGP+ LF + G V V ++ E LYF +
Sbjct: 66 --FPELKKFPILPIYLGGPVSSNRLFFIHSLG---PVIPDSV--KIEENLYFDG-DFEAL 117
Query: 231 AAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEE 290
M+ N E +FF G GW K QL+ EI W V+ S + L W
Sbjct: 118 KRYMLSGNPFN-ERIKFFLGYSGWTKNQLDGEIVRDSWLVSHSSDRSLMLAHDD-SFWTR 175
Query: 291 LLWLMGR 297
+ L+GR
Sbjct: 176 SVELLGR 182
>gi|91794025|ref|YP_563676.1| hypothetical protein Sden_2674 [Shewanella denitrificans OS217]
gi|123060737|sp|Q12KS3.1|Y2674_SHEDO RecName: Full=UPF0301 protein Sden_2674
gi|91716027|gb|ABE55953.1| protein of unknown function DUF179 [Shewanella denitrificans OS217]
Length = 184
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 31/188 (16%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAAGTF 180
K LLIA LDG FERTVI + + G GI++NRP +S++ + + LDA
Sbjct: 5 KNHLLIAMPSLDG-SFFERTVIYVCEHDEKGAMGIVINRPIGLSVEALLIQMDLDAEANL 63
Query: 181 SDRP-LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
SD + GGP+ + G L SP+ +V + E V + T +
Sbjct: 64 SDDAQVLIGGPVLPDRGFVLHSPE----KVWTNS--EAVSDYCTLTTSRDI--------L 109
Query: 238 NAVG----PEDFRFFDGCCGWEKEQLNEEIRAGYW-TVAACSPSVIGLESGTLGLWEELL 292
NA+G P F+ G GW K+QL +E+ W T+ A S V ++ E L
Sbjct: 110 NAIGSADAPSQFKVALGYSGWSKDQLEQELADNTWLTIKASSELVFDVDY-------EQL 162
Query: 293 WLMGRRKV 300
W + +++
Sbjct: 163 WTLATKEL 170
>gi|311747135|ref|ZP_07720920.1| putative transcriptional regulator [Algoriphagus sp. PR1]
gi|126578843|gb|EAZ83007.1| putative transcriptional regulator [Algoriphagus sp. PR1]
Length = 189
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 12/177 (6%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P G LLI+ L + F R+V+++ G G+++N+PS++ + E+ ++
Sbjct: 9 PRAGDLLISEPFLQDEN-FVRSVVMLCEHNEEGSFGLVINKPSILKLGELVESL-----D 62
Query: 180 FSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
F D +F GGP+E+ L G E+ +S Q+ L++G E +K
Sbjct: 63 FLDAEVFVGGPVEQNT-LHYIYTGEKELERSI---QIGTDLWWGGD--YEQLVEKLKTGL 116
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
+ P+ RFF G GW +QL EE+ W V E LW +LL MG
Sbjct: 117 INPDRVRFFIGYSGWGLDQLEEELEDKTWIVCRTEVDPKTFEYTPEELWRKLLKNMG 173
>gi|18087872|gb|AAL59026.1|AC087182_9 hypothetical protein [Oryza sativa Japonica Group]
gi|31432749|gb|AAP54342.1| Uncharacterized ACR, COG1678 family protein, expressed [Oryza sativa
Japonica Group]
gi|125575188|gb|EAZ16472.1| hypothetical protein OsJ_31942 [Oryza sativa Japonica Group]
Length = 1252
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPM-GPSGIILN-RPSLMSIKEMRSTVLDAAGTF 180
G +L AT KL F+ + +LI+S + G G+I+N R S + K + ++
Sbjct: 1098 GSVLTATSKLGSAVPFDNSQVLIVSADSREGFHGLIINKRLSWDTFKNLDGSM----EPI 1153
Query: 181 SDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
PLF+GGP+ +G +LVS V G + QV+ G+Y+G +K
Sbjct: 1154 KHAPLFYGGPVVVQGYYLVSLS----RVAFDG-YLQVIPGVYYGNVAATAQVTRRIKSGE 1208
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
E+ FF G WE QL +E+ G W V+
Sbjct: 1209 QSAENLWFFLGFSNWEYSQLFDELSEGAWQVS 1240
>gi|125532411|gb|EAY78976.1| hypothetical protein OsI_34083 [Oryza sativa Indica Group]
Length = 1252
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPM-GPSGIILN-RPSLMSIKEMRSTVLDAAGTF 180
G +L AT KL F+ + +LI+S + G G+I+N R S + K + ++
Sbjct: 1098 GSVLTATSKLGSAVPFDNSQVLIVSADSREGFHGLIINKRLSWDTFKNLDGSM----EPI 1153
Query: 181 SDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
PLF+GGP+ +G +LVS V G QV+ G+Y+G +K
Sbjct: 1154 KHAPLFYGGPVVVQGYYLVSLS----RVAFDGYL-QVIPGVYYGNVAATAQVTRRIKSGE 1208
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
E+ FF G WE QL +E+ G W V+
Sbjct: 1209 QSAENLWFFLGFSNWEYSQLFDELSEGAWQVS 1240
>gi|115482602|ref|NP_001064894.1| Os10g0485100 [Oryza sativa Japonica Group]
gi|113639503|dbj|BAF26808.1| Os10g0485100, partial [Oryza sativa Japonica Group]
Length = 855
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPM-GPSGIILN-RPSLMSIKEMRSTVLDAAGTF 180
G +L AT KL F+ + +LI+S + G G+I+N R S + K + ++
Sbjct: 701 GSVLTATSKLGSAVPFDNSQVLIVSADSREGFHGLIINKRLSWDTFKNLDGSM----EPI 756
Query: 181 SDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
PLF+GGP+ +G +LVS V G QV+ G+Y+G +K
Sbjct: 757 KHAPLFYGGPVVVQGYYLVSLS----RVAFDGYL-QVIPGVYYGNVAATAQVTRRIKSGE 811
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
E+ FF G WE QL +E+ G W V+
Sbjct: 812 QSAENLWFFLGFSNWEYSQLFDELSEGAWQVS 843
>gi|372221351|ref|ZP_09499772.1| hypothetical protein MzeaS_03469 [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 185
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 15/185 (8%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P+KG LLIA L G F R+V+L+ G G ILN+P I ++ + D
Sbjct: 4 KPKKGKLLIAEPSLTGDVSFNRSVVLLAEHNEEGSVGFILNKPLDYDICDL---IGDIKL 60
Query: 179 TFSDRPLFFGGPLEE-GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
F ++ GGP+E+ L+ + E+ ++ + ++ +G+Y+G ++
Sbjct: 61 PFK---VYNGGPVEQDNLYFIHKV---PELIENSI--EISDGIYWGGD--FEKTISLIND 110
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELLWLMG 296
+ +D RFF G GW QL+ E+++ W V A ++ W E+++ L G
Sbjct: 111 GVITDKDIRFFLGYSGWAALQLDHELKSNSWVVTANVYESDIIQKSAEAFWKEKMVELGG 170
Query: 297 RRKVW 301
+W
Sbjct: 171 DYLIW 175
>gi|298208492|ref|YP_003716671.1| transcriptional regulator [Croceibacter atlanticus HTCC2559]
gi|83848415|gb|EAP86284.1| putative transcriptional regulator [Croceibacter atlanticus
HTCC2559]
Length = 186
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P+KG LLIA + F R+VIL+ G G ILN+ S E+ + +
Sbjct: 5 KPKKGDLLIAEPSILADVSFNRSVILLAEHSIEGSVGFILNK---HSDYELSDLIPEIEN 61
Query: 179 TFSDRPLFFGGPLEEG-LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
TF P++ GGP+EE L+ + D + S ++ G+Y+ +++
Sbjct: 62 TF---PVYKGGPVEENNLYFIHKVP--DLIPNSI---EISNGIYWAGD--FNEVTKLIMS 111
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP--SVIGLESGTLGLW-EELLWL 294
V ED RFF G GW+ QL++E+ W V ++IG S + W E+++ L
Sbjct: 112 KKVSEEDIRFFLGYSGWDATQLDDELSGNSWIVLENEDKNNIIGKSSES--FWKEKMVEL 169
Query: 295 MGRRKVW 301
G +W
Sbjct: 170 GGDYLIW 176
>gi|356540994|ref|XP_003538969.1| PREDICTED: uncharacterized protein LOC100814325 [Glycine max]
Length = 1098
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 86/191 (45%), Gaps = 23/191 (12%)
Query: 83 EQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTV 142
+QV+RP + +N P N L + H + G +LIATEKL GVH F+ +
Sbjct: 919 DQVVRPNL----------MNSPASNELHEASPHVV----IGSVLIATEKLLGVHPFDGSK 964
Query: 143 ILILSMEPM-GPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGP-LEEGLFLVSP 200
ILI++ + G G+ILN+ S L+ + PL GGP ++ G+ L+S
Sbjct: 965 ILIVAANQVTGFQGLILNKHIQWSFLPKLEEGLE---NLKEAPLSLGGPVMKTGMPLLSL 1021
Query: 201 KGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLN 260
+++ G+YF + T E +K D+ FF G W QL
Sbjct: 1022 T----RTVSGNNLPEIIPGIYFLDQVTTIRKIEELKSANQPVGDYWFFLGYSSWGWNQLY 1077
Query: 261 EEIRAGYWTVA 271
+E+ G W ++
Sbjct: 1078 DEMAEGAWNLS 1088
>gi|167855790|ref|ZP_02478543.1| hypothetical protein HPS_03119 [Haemophilus parasuis 29755]
gi|167853069|gb|EDS24330.1| hypothetical protein HPS_03119 [Haemophilus parasuis 29755]
Length = 185
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 15/180 (8%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE----MRSTVLDAA 177
+G LIAT ++ + F+R VI I G GI++N P+ +S+ E M + +
Sbjct: 5 QGQFLIATPDMNDDY-FDRAVIYICEHNEHGAMGIMINSPTDLSVMELLAKMDFLMANER 63
Query: 178 GTFSDRPLFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
D+ + GGP+ +E F++ + + +M +T G +
Sbjct: 64 NYTKDQLVLSGGPVGQERGFILHTATDQLFLHSYPTADDLMLTTSGDILDTFG------R 117
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
++A P DF GCC W+ +QL +EI YW A S ++ E+G L W E L+G
Sbjct: 118 QDA--PADFIVCLGCCTWKADQLEQEIACNYWVTAPASHKIL-FETGYLDRWSEANALLG 174
>gi|149372187|ref|ZP_01891457.1| putative transcriptional regulator [unidentified eubacterium SCB49]
gi|149354954|gb|EDM43516.1| putative transcriptional regulator [unidentified eubacterium SCB49]
Length = 187
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 19/158 (12%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPM-GPSGIILNRPSLMSIKEMRSTVLDAA 177
+P+KG LL+A + G F R+V+L+ + G G ILN+P +K+ V +
Sbjct: 5 KPKKGHLLVAEPSIMGDVSFNRSVVLLAEYNQINGSVGFILNKPLDYKLKDFVPEVSSSL 64
Query: 178 GTFSDRPLFFGGPLEE-GLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
++ GGP+E+ L+ + P+ + V ++ G+Y+G E+
Sbjct: 65 TVYN------GGPVEQDNLYFIHTIPELIPNSV-------EISNGIYWGGD--FNAIIEL 109
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAA 272
+K + + + RFF G GW EQL EE+ W V +
Sbjct: 110 LKNDTLTEKQIRFFLGYSGWANEQLEEELSLNSWKVVS 147
>gi|371775780|ref|ZP_09482102.1| putative transcriptional regulator [Anaerophaga sp. HS1]
Length = 199
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 76/184 (41%), Gaps = 14/184 (7%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
EP G +LIA L G + F R+++L+ G G +LN+P+ + E+ +L G
Sbjct: 19 EPAVGRVLIAEPFLPGPY-FGRSIVLLTEHNEHGTVGFVLNKPTELYPDEIVDDILSFEG 77
Query: 179 TFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
LF GGP+ G G + + V G F C +M+ R
Sbjct: 78 E-----LFVGGPVSSNTLSFLHTLGEQLPGATKITSTVYWGGDFE------CLKKMINRG 126
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGR- 297
+ +FF G GW QL++EI W V+ +I + +WE + +G
Sbjct: 127 EASSQSVKFFMGYSGWAPGQLDDEIAENSWVVSTLRDELI-MTRDVKNIWETAMHELGDI 185
Query: 298 RKVW 301
K W
Sbjct: 186 YKTW 189
>gi|383450794|ref|YP_005357515.1| putative transcriptional regulator [Flavobacterium indicum
GPTSA100-9]
gi|380502416|emb|CCG53458.1| Putative transcriptional regulator [Flavobacterium indicum
GPTSA100-9]
Length = 186
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 22/182 (12%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P+KGCLL+A + F R VIL+ G G I+N+P +I ++ + + +
Sbjct: 6 PKKGCLLVAEPSILNDISFNRAVILLTEHNQDGSVGFIINKPLTHTINDL---IPEINAS 62
Query: 180 FSDRPLFFGGPLEE-GLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
F ++ GGP+E+ L+ + P D + ++ G+Y+G + ++
Sbjct: 63 FI---IYNGGPVEQDNLYFIHNVPNLIPDSI-------EISNGIYWGGDFEI--TKNLIN 110
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA--ACSPSVIGLESGTLGLWEELLWL 294
+ E+ RFF G GWE +QL E+ W + +IG S W+E +
Sbjct: 111 EGIILKENIRFFLGYTGWETDQLEYELEENSWIIVENELKEKIIGKNSQN--FWKEKMNQ 168
Query: 295 MG 296
+G
Sbjct: 169 LG 170
>gi|407691929|ref|YP_006816718.1| hypothetical protein ASU2_01685 [Actinobacillus suis H91-0380]
gi|407387986|gb|AFU18479.1| hypothetical protein ASU2_01685 [Actinobacillus suis H91-0380]
Length = 186
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 15/183 (8%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE----MRSTVL 174
E +G LIAT ++D + F+RTVI I G G+++N P+ +S+ E M +
Sbjct: 3 ENLQGKFLIATPEIDDDY-FDRTVIYICEHNSNGAMGLVINTPTDLSVLELITRMDFQMA 61
Query: 175 DAAGTFSDRPLFFGGPLEEGL-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
+ D+ + GGP+ + F++ K + + V + ++ +++G
Sbjct: 62 NQRNYHKDQMVLSGGPVSQDRGFIIHTKTEQEFLHSYRVTDNILLTTSGDVLDSLG---- 117
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLW 293
PE F GC W+ EQL +EI YW V+ + + E+G L W E
Sbjct: 118 ----KPEAPEKFIVCLGCATWKPEQLEQEIARNYWLVSDANDKTL-FETGYLERWVEANE 172
Query: 294 LMG 296
++G
Sbjct: 173 MLG 175
>gi|224539571|ref|ZP_03680110.1| hypothetical protein BACCELL_04478 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518805|gb|EEF87910.1| hypothetical protein BACCELL_04478 [Bacteroides cellulosilyticus
DSM 14838]
Length = 197
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 25/189 (13%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P +G +LI+ E +F R++IL++ G G++LN+P + + ++ D
Sbjct: 17 PSRGKVLIS-EPFLYDEMFGRSIILLVDHTLDGTMGLVLNKPLPLYLNDVLKDFKDVENI 75
Query: 180 FSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
P++ GGPL + +L + KG D + Q+ +G Y + + ++R
Sbjct: 76 ----PIYKGGPLCTDTLFYLHTLKGIKDSL-------QIGKGFY------LNGDFDAIRR 118
Query: 238 NAVGPEDF----RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLW 293
+ D RFF G GWE +QL +EI W + + + + + E G+ LW+ +L
Sbjct: 119 YILEGNDITGKIRFFLGYSGWEHDQLCQEIEENTWLIGSTNIASLMDEKGSAELWKNVLG 178
Query: 294 -LMGRRKVW 301
L G+ + W
Sbjct: 179 ELGGKYQTW 187
>gi|381186035|ref|ZP_09893611.1| putative transcriptional regulator [Flavobacterium frigoris PS1]
gi|379652067|gb|EIA10626.1| putative transcriptional regulator [Flavobacterium frigoris PS1]
Length = 214
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 19/184 (10%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
KG LLIA + G F R+VIL+ + G G I+N+P ++ T+ D +
Sbjct: 36 KGQLLIAEPSIIGDLSFNRSVILLADHDKDGSVGFIINKP-------LKYTIHDLLPEIN 88
Query: 182 DR-PLFFGGPLEE-GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
R ++ GGP+E+ L+ + E+ + + ++ G+Y+G ++
Sbjct: 89 ARFKIYNGGPVEQDNLYFIH---NIPELIPNSI--EISNGIYWGGD--FESTKGLINNGK 141
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACS--PSVIGLESGTLGLWEELLWLMGR 297
+ E+ RFF G GW ++QL E+ W +A S +IG +S T E+++ L G
Sbjct: 142 INKENIRFFLGYTGWNEQQLESEMNDNSWIIAPNSYKNKIIG-KSSTHFWKEQIIELGGD 200
Query: 298 RKVW 301
+W
Sbjct: 201 YLIW 204
>gi|87120931|ref|ZP_01076823.1| hypothetical protein MED121_09990 [Marinomonas sp. MED121]
gi|86163769|gb|EAQ65042.1| hypothetical protein MED121_09990 [Marinomonas sp. MED121]
Length = 188
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 11/162 (6%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
E K LI+ +L+ + F++TV I G GII+NRPS + E+ + +
Sbjct: 6 ESLKNHFLISMPQLNDPN-FQQTVTYICEHTAEGAMGIIINRPSKIDFTELANHLGIQIN 64
Query: 179 T--FSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
T ++ P+F GGP+E + V V E+V T E +
Sbjct: 65 TPHLANEPIFSGGPVESERGFILHTSDKTWVNTLPVTEEVALSAALETLENIA------- 117
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ GPE F GC GW+ QL EEI W V V+
Sbjct: 118 -HGEGPESFLISLGCAGWQAGQLEEEISNNVWLVCEADLDVL 158
>gi|342903515|ref|ZP_08725326.1| UPF0301 protein [Haemophilus haemolyticus M21621]
gi|341955619|gb|EGT82075.1| UPF0301 protein [Haemophilus haemolyticus M21621]
Length = 186
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 20/164 (12%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAG 178
+G LIA LD F RTV+ + G G+++N+P+ +SI E+ S + +
Sbjct: 5 QGKFLIAMPHLDDY--FNRTVVFMCEHNEQGSMGLVINQPTDLSIAELYSKLNFMMKNDR 62
Query: 179 TFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK----ETVGCAAEM 234
TFS+ + GGP+ + K +E + ++ + L T ET+G E
Sbjct: 63 TFSNEMVVAGGPMHSERGFILHKNTPNEFQHT---YKITDDLSMTTSADVIETLGSELE- 118
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE + GC WE QL +EI W VA + ++
Sbjct: 119 -------PEKYLIALGCSSWEAGQLEKEITDNAWLVATANDQIL 155
>gi|219871132|ref|YP_002475507.1| hypothetical protein HAPS_0932 [Haemophilus parasuis SH0165]
gi|219691336|gb|ACL32559.1| putative transcriptional regulator [Haemophilus parasuis SH0165]
Length = 185
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 15/180 (8%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE----MRSTVLDAA 177
+G LIAT ++ + F+R VI I G GI++N P+ +S+ E M + +
Sbjct: 5 QGQFLIATLDMNDDY-FDRAVIYICEHNEHGAMGIMINSPTDLSVMELLAKMDFLMANER 63
Query: 178 GTFSDRPLFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
D+ + GGP+ +E F++ + + +M +T G +
Sbjct: 64 NYTKDQLVLSGGPVGQERGFILHTATDQLFLHSYPTADDLMLTTSGDILDTFG------R 117
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
++A P DF GCC W+ +QL +EI YW A S ++ E+G L W E L+G
Sbjct: 118 QDA--PADFIVCLGCCTWKADQLEQEIACNYWVTAPASHKIL-FETGYLDRWSEANALLG 174
>gi|119356713|ref|YP_911357.1| hypothetical protein Cpha266_0885 [Chlorobium phaeobacteroides DSM
266]
gi|166228775|sp|A1BEV6.1|Y885_CHLPD RecName: Full=UPF0301 protein Cpha266_0885
gi|119354062|gb|ABL64933.1| protein of unknown function DUF179 [Chlorobium phaeobacteroides DSM
266]
Length = 187
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
+ G LL+A+ L + F+RTV++I G G ILNRP M V +A F
Sbjct: 9 QSGKLLLASANLLESN-FKRTVLIICEHNESGSLGFILNRP-------MEFKVCEAVAGF 60
Query: 181 SD--RPLFFGGPLEEGL--FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
+ PL GGP++ FL S GD + + ++ GL++G + + ++
Sbjct: 61 EEIEEPLHMGGPVQVDTVHFLHSR---GDIIDGA---TEIFPGLFWGGDKN--QVSFLLN 112
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ P + RFF G GW QL EE G W +A S VI
Sbjct: 113 TGVMQPSEIRFFLGYSGWSAGQLEEEFEIGSWYIAEASRDVI 154
>gi|32034408|ref|ZP_00134590.1| COG1678: Putative transcriptional regulator [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207720|ref|YP_001052945.1| hypothetical protein APL_0232 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|165975692|ref|YP_001651285.1| hypothetical protein APJL_0237 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|190149503|ref|YP_001968028.1| hypothetical protein APP7_0234 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303251646|ref|ZP_07337819.1| hypothetical protein APP6_0850 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|303252797|ref|ZP_07338957.1| hypothetical protein APP2_0385 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307245045|ref|ZP_07527139.1| hypothetical protein appser1_2540 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307247217|ref|ZP_07529267.1| hypothetical protein appser2_2160 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307251762|ref|ZP_07533665.1| hypothetical protein appser6_2820 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307253999|ref|ZP_07535847.1| hypothetical protein appser9_2530 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307256260|ref|ZP_07538044.1| hypothetical protein appser10_2620 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307258454|ref|ZP_07540192.1| hypothetical protein appser11_2540 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307260689|ref|ZP_07542379.1| hypothetical protein appser12_2640 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|307262822|ref|ZP_07544447.1| hypothetical protein appser13_2460 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|166227717|sp|A3MYV4.1|Y232_ACTP2 RecName: Full=UPF0301 protein APL_0232
gi|226701260|sp|B3H074.1|Y234_ACTP7 RecName: Full=UPF0301 protein APP7_0234
gi|226701271|sp|B0BSN9.1|Y237_ACTPJ RecName: Full=UPF0301 protein APJL_0237
gi|126096512|gb|ABN73340.1| hypothetical protein APL_0232 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|165875793|gb|ABY68841.1| putative transcriptional regulator [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|189914634|gb|ACE60886.1| hypothetical protein APP7_0234 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302648358|gb|EFL78554.1| hypothetical protein APP2_0385 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302649488|gb|EFL79671.1| hypothetical protein APP6_0850 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306854033|gb|EFM86244.1| hypothetical protein appser1_2540 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306856275|gb|EFM88428.1| hypothetical protein appser2_2160 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306860763|gb|EFM92773.1| hypothetical protein appser6_2820 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306863025|gb|EFM94971.1| hypothetical protein appser9_2530 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865224|gb|EFM97123.1| hypothetical protein appser10_2620 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306867459|gb|EFM99309.1| hypothetical protein appser11_2540 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306869610|gb|EFN01397.1| hypothetical protein appser12_2640 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306871837|gb|EFN03556.1| hypothetical protein appser13_2460 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 186
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 15/183 (8%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE----MRSTVL 174
E +G LIAT ++D + F+RTVI I G G+++N P+ +S+ E M +
Sbjct: 3 ENLQGKFLIATPEIDDDY-FDRTVIYICEHNSNGAMGLVINTPTDLSVLELITRMDFQMA 61
Query: 175 DAAGTFSDRPLFFGGPLEEGL-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
+ D+ + GGP+ + F++ K + + V + ++ +++G
Sbjct: 62 NQRNYHKDQMVLSGGPVSQDRGFIIHTKTEQEFLHSYRVTDNILLTTSGDVLDSLG---- 117
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLW 293
PE F GC W+ EQL +EI YW ++ + + E+G L W E
Sbjct: 118 ----KPEAPEKFIVCLGCATWKPEQLEQEIARNYWLISEANDKTL-FETGYLERWVEANE 172
Query: 294 LMG 296
++G
Sbjct: 173 MLG 175
>gi|365960029|ref|YP_004941596.1| transcriptional regulator [Flavobacterium columnare ATCC 49512]
gi|365736710|gb|AEW85803.1| transcriptional regulator [Flavobacterium columnare ATCC 49512]
Length = 186
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P+KG LLIA + G F R+V+L+ G G ILN+P +IK++ + + +
Sbjct: 5 KPQKGHLLIAEPSIIGDLSFNRSVVLLADHNEEGSIGFILNKPLNYTIKDL---IPEISA 61
Query: 179 TFSDRPLFFGGPLEE-GLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
+F ++ GGP+E+ L+ + P V ++ G+Y+G E++
Sbjct: 62 SFK---IYNGGPVEQDNLYFIHNVPHLISGSV-------EIASGIYWGGD--FQQTKELI 109
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAA--CSPSVIGLESGTLGLW-EELL 292
+ + RFF G GW+ EQL E+ + W ++ S ++IG S W E+++
Sbjct: 110 NNEKINKNNIRFFLGYSGWDAEQLQNELESHSWIISENDLSNNIIGKSSSN--FWREKII 167
Query: 293 WLMGRRKVW 301
G VW
Sbjct: 168 EQGGEYLVW 176
>gi|442770864|gb|AGC71567.1| protein of unknown function DUF179 [uncultured bacterium
A1Q1_fos_517]
Length = 195
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEGLFL 197
F ++V+L+L+ E G G I+NR + + + E+ + + A G FGGP++ +
Sbjct: 24 FRKSVVLLLAHEEEGSFGFIVNRRTELKVAEILTDLKLAWGGDEGDLAQFGGPVQPQVGT 83
Query: 198 VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKE 257
V G GDE+ ++ G++ + +G A + R P FR F G GW +
Sbjct: 84 VLYSGAGDELPPLEAATEIFPGVHL--TQHLGELATLAGRP---PHRFRLFLGYAGWGEG 138
Query: 258 QLNEEIRAGYWTVAACSPSVIGLESGTLGLWE 289
QL EI W +A P +I T +WE
Sbjct: 139 QLVTEILRNDWLIAPVDPDLI-FGGTTEAVWE 169
>gi|189346307|ref|YP_001942836.1| hypothetical protein Clim_0777 [Chlorobium limicola DSM 245]
gi|226708079|sp|B3EHS7.1|Y777_CHLL2 RecName: Full=UPF0301 protein Clim_0777
gi|189340454|gb|ACD89857.1| protein of unknown function DUF179 [Chlorobium limicola DSM 245]
Length = 187
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+A+ L + F+RTV+L+ G G ILNRP M V +A F D
Sbjct: 11 GKLLLASANLLESN-FKRTVLLMCEHNEQGSMGFILNRP-------MEFKVCEAIAGFED 62
Query: 183 --RPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
PL GGP++ + + + +G + G +F+ V G G K+ + + ++
Sbjct: 63 IEEPLHMGGPVQVDTVHFIHSRGDSID-GAIEIFDGVFWG---GDKDQL---SYLINTGV 115
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ P + RFF G GW QL +E G W A + +I
Sbjct: 116 INPNEIRFFLGYSGWGAGQLEQEFEEGSWYTADATREMI 154
>gi|423343479|ref|ZP_17321192.1| hypothetical protein HMPREF1077_02622 [Parabacteroides johnsonii
CL02T12C29]
gi|409215176|gb|EKN08182.1| hypothetical protein HMPREF1077_02622 [Parabacteroides johnsonii
CL02T12C29]
Length = 198
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 19/191 (9%)
Query: 112 KWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRS 171
K H P +G +LI+ L + F+R+V+L++ G G +LN+ + +S+ +
Sbjct: 9 KITHNDVLPAQGSILISEPFLQDAY-FQRSVVLLVEHTQEGSMGFVLNKKTELSV----N 63
Query: 172 TVLDAAGTFSDRPLFFGGPLEEG-LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGC 230
T F + P++ GGP+ LF + G D + + V ++ + LYF G
Sbjct: 64 TFFADLQEFPEMPIYLGGPVSANRLFFIHSLG--DLIIPNSV--KINDHLYFD-----GD 114
Query: 231 AAEMVKRNAVG-PED--FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGL 287
+ +++ G P D +FF G GW+K QL+ EI W V+ S + L G
Sbjct: 115 FSALIRYIQNGHPIDGKVKFFLGYSGWQKGQLHNEIAKNSWVVSHTSNRNMLLAEGE-DF 173
Query: 288 WEELLWLMGRR 298
W++ L +G +
Sbjct: 174 WKKSLESLGSQ 184
>gi|218261722|ref|ZP_03476457.1| hypothetical protein PRABACTJOHN_02125 [Parabacteroides johnsonii
DSM 18315]
gi|218223829|gb|EEC96479.1| hypothetical protein PRABACTJOHN_02125 [Parabacteroides johnsonii
DSM 18315]
Length = 198
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 19/191 (9%)
Query: 112 KWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRS 171
K H P +G +LI+ L + F+R+V+L++ G G +LN+ + +S+ +
Sbjct: 9 KITHNDVLPAQGSILISEPFLQDAY-FQRSVVLLVEHTQEGSMGFVLNKKTELSV----N 63
Query: 172 TVLDAAGTFSDRPLFFGGPLEEG-LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGC 230
T F + P++ GGP+ LF + G D + + V ++ + LYF G
Sbjct: 64 TFFADLQEFPEMPIYLGGPVSANRLFFIHSLG--DLIIPNSV--KINDHLYFD-----GD 114
Query: 231 AAEMVKRNAVG-PED--FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGL 287
+ +++ G P D +FF G GW+K QL+ EI W V+ S + L G
Sbjct: 115 FSALIRYIQNGHPIDGKVKFFLGYSGWQKGQLHNEIAKNSWVVSHTSNRNMLLAEGE-DF 173
Query: 288 WEELLWLMGRR 298
W++ L +G +
Sbjct: 174 WKKSLESLGSQ 184
>gi|386822071|ref|ZP_10109286.1| putative transcriptional regulator [Joostella marina DSM 19592]
gi|386423317|gb|EIJ37148.1| putative transcriptional regulator [Joostella marina DSM 19592]
Length = 186
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P+KG LLIA + G F R+V+L+ G G ILN+P + E+ + +
Sbjct: 6 PKKGHLLIAEPSIIGDVAFNRSVVLLAEHNNEGSIGFILNKPLEFRLNELVPEISKSLKV 65
Query: 180 FSDRPLFFGGPLEE-GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK-ETVGCAAEMVKR 237
++ GGP+E+ L+ + D + S ++ G+Y+G ET+ +++
Sbjct: 66 YN------GGPVEQDNLYFIHKI--PDLISNS---IEISNGIYWGGDFETI---IDLINS 111
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELLWLMG 296
+ + +FF G GW+ QL +E+ + W V+ ++ + W E++L L G
Sbjct: 112 GDIKDSEIKFFLGYSGWDIMQLEKELSSNSWVVSENKYKSNIIKKAPMTFWREKMLELGG 171
Query: 297 RRKVW 301
+W
Sbjct: 172 DYLIW 176
>gi|242034141|ref|XP_002464465.1| hypothetical protein SORBIDRAFT_01g018920 [Sorghum bicolor]
gi|241918319|gb|EER91463.1| hypothetical protein SORBIDRAFT_01g018920 [Sorghum bicolor]
Length = 1193
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSM-EPMGPSGIILN-RPSLMSIKEMRSTVLDAAGTF 180
G +L ATEKL F+ +LI+S G G+I+N R S K++ S++
Sbjct: 1039 GSILTATEKLGAAVPFDNAKVLIVSSGSHEGFHGLIINKRLSWGVFKDLDSSM----ERI 1094
Query: 181 SDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
PLF+GGP+ +G LVS V G + QV+ G+Y+G +K
Sbjct: 1095 KHAPLFYGGPVVVQGYHLVSLS----RVAWEG-YMQVIPGVYYGNIVATSRVVTRIKLGE 1149
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
ED FF G GW QL +E+ G W V+
Sbjct: 1150 QSVEDLWFFVGYSGWGYSQLFDELSEGAWLVS 1181
>gi|376316994|emb|CCG00370.1| Protein containing DUF179 [uncultured Flavobacteriia bacterium]
gi|376317035|emb|CCG00410.1| transcriptional regulator [uncultured Flavobacteriia bacterium]
Length = 179
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPS-LMSIKEMRSTVLDAAGTF 180
KG +LI++ L IF +++ILI+ G +G ILNRPS L IKE+ S+
Sbjct: 2 KGKILISSPSLLTDMIFYKSIILIVDQTDEGITGFILNRPSDLFMIKEVESSEKIKI--- 58
Query: 181 SDRPLFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
L++GGP+ + +L+ + E+ + + L++G + V++
Sbjct: 59 ---DLYYGGPVSSDHFYLLKSEKIYTEI------INIYDNLFWGN--NLDFLINQVEKGI 107
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
+ +DF F G GW QL++EI W ++
Sbjct: 108 IKMDDFILFQGYSGWGLGQLDDEIANDSWIIS 139
>gi|373467955|ref|ZP_09559241.1| putative ACR [Haemophilus sp. oral taxon 851 str. F0397]
gi|417839705|ref|ZP_12485878.1| UPF0301 protein [Haemophilus haemolyticus M19107]
gi|417839886|ref|ZP_12486050.1| UPF0301 protein [Haemophilus haemolyticus M19107]
gi|417844451|ref|ZP_12490494.1| UPF0301 protein [Haemophilus haemolyticus M21639]
gi|341951519|gb|EGT78090.1| UPF0301 protein [Haemophilus haemolyticus M19107]
gi|341952071|gb|EGT78614.1| UPF0301 protein [Haemophilus haemolyticus M19107]
gi|341956734|gb|EGT83151.1| UPF0301 protein [Haemophilus haemolyticus M21639]
gi|371756993|gb|EHO45792.1| putative ACR [Haemophilus sp. oral taxon 851 str. F0397]
Length = 186
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 20/164 (12%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAG 178
+G LIA LD F RTV+ + G G+++N+P+ +SI E+ S + +
Sbjct: 5 QGKFLIAMPHLDDY--FNRTVVFMCEHNEQGSMGLVINQPTDLSIAELYSKLNFMMKNDR 62
Query: 179 TFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK----ETVGCAAEM 234
TFS+ + GGP+ + K +E + ++ + L T ET+G
Sbjct: 63 TFSNEMVVAGGPMHSERGFILHKNTPNEFQHT---YKITDDLSMTTSADVIETLGSE--- 116
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ PE + GC WE QL +EI W VA + ++
Sbjct: 117 -----LAPEKYLIALGCSSWEAGQLEKEITDNAWLVATANDQIL 155
>gi|441521722|ref|ZP_21003380.1| hypothetical protein GSI01S_16_00660 [Gordonia sihwensis NBRC
108236]
gi|441458660|dbj|GAC61341.1| hypothetical protein GSI01S_16_00660 [Gordonia sihwensis NBRC
108236]
Length = 196
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 81/176 (46%), Gaps = 13/176 (7%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
E G LLIA+ L G F RTVI ++ + G G++LNR S ++ + + A
Sbjct: 12 EVSAGSLLIASTALTG-PTFARTVIYVIEHDEQGTLGVVLNRMSDAAVYNVLPAWTELAA 70
Query: 179 TFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
S R +F GGP+ L L K G D V K QV+ G V A+ +
Sbjct: 71 --SPRAVFVGGPVATSSALCLGVAKTGVD-VTKQPRLHQVL-----GPVAMVDLDADPDE 122
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
V R F G GW+ QL+EE+ G W VA P+ + L ++ +W+ +L
Sbjct: 123 LAQVL-TGVRIFAGYAGWDAGQLDEELAEGSWIVAQGLPTDL-LAEPSVDVWQRVL 176
>gi|424843469|ref|ZP_18268094.1| putative transcriptional regulator [Saprospira grandis DSM 2844]
gi|395321667|gb|EJF54588.1| putative transcriptional regulator [Saprospira grandis DSM 2844]
Length = 181
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
+ G LL+A E H F+R VIL+ G G +LN+P + IK++ + D +
Sbjct: 4 QAGRLLLA-EPFMSDHHFKRAVILLCDHGRDGSVGFVLNKPMGLDIKDLVNDFPDFSAE- 61
Query: 181 SDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+ FGGP++ + + V KG E+ + + ++ EGLY+G ++++
Sbjct: 62 ----VHFGGPVQTDSIHYVHTKG---ELLEGAM--KIEEGLYWGGNYE--QLKVLIRQGL 110
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRR 298
+ D FF G GW + QL EEI W +A + I L LW+ LL +G R
Sbjct: 111 LEKNDITFFVGYSGWGEGQLQEEIDVQTWILAEGDRNYIFRPQNEL-LWKSLLENLGDR 168
>gi|433610234|ref|YP_007042603.1| hypothetical protein BN6_85160 [Saccharothrix espanaensis DSM
44229]
gi|407888087|emb|CCH35730.1| hypothetical protein BN6_85160 [Saccharothrix espanaensis DSM
44229]
Length = 192
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 77/182 (42%), Gaps = 17/182 (9%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
E E G LL+A L + F RTV+ I+ G G++LNRPS +++ + VL A G
Sbjct: 8 EVEPGSLLVAAPSLTDSN-FRRTVVYIIDHRGEGTLGVVLNRPSEVAVHD----VLPAWG 62
Query: 179 TFSDRP--LFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
+ RP ++ GGP+++ L L + + G D GV E
Sbjct: 63 PHATRPQAVYIGGPVQQKTALCLAALRTGEDHGALEGVVNVHGPVALIDLDSDPDALVEK 122
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWL 294
V+ R F G GW + QL EI G W V P + L + LW +L
Sbjct: 123 VR-------GLRVFAGYSGWGEGQLAGEIERGDWIVVPGLPDDV-LTPPNVDLWGRVLRR 174
Query: 295 MG 296
G
Sbjct: 175 QG 176
>gi|436834551|ref|YP_007319767.1| protein of unknown function DUF179 [Fibrella aestuarina BUZ 2]
gi|384065964|emb|CCG99174.1| protein of unknown function DUF179 [Fibrella aestuarina BUZ 2]
Length = 185
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 83/185 (44%), Gaps = 33/185 (17%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILS-MEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
+ LLIA E G FER+V++I E G G+ILN+ + + + ++ V +
Sbjct: 8 RNSLLIA-EPFLGDANFERSVVVICEHTEHDGTFGLILNQSTTLHVSDVIDDV------Y 60
Query: 181 SDRPLFFGGPLE-EGLFLVSPKGG--------GDEVGKSGVFEQVMEGLYFGTKETVGCA 231
+D PLF GGP++ + L V + G+ + SG FEQV + L GT
Sbjct: 61 ADIPLFVGGPVQPDTLHYVHRRPDLIDNSIPLGEGIYWSGNFEQVKQALNIGT------- 113
Query: 232 AEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEEL 291
+ D RFF G GWE QL+ E+ W + + + ++ LW +
Sbjct: 114 --------LTENDARFFIGYSGWEAGQLSRELDEKTWIITQTDGNFL-FDTPADQLWRGI 164
Query: 292 LWLMG 296
L MG
Sbjct: 165 LKRMG 169
>gi|193212329|ref|YP_001998282.1| hypothetical protein Cpar_0662 [Chlorobaculum parvum NCIB 8327]
gi|226708002|sp|B3QMC9.1|Y662_CHLP8 RecName: Full=UPF0301 protein Cpar_0662
gi|193085806|gb|ACF11082.1| protein of unknown function DUF179 [Chlorobaculum parvum NCIB 8327]
Length = 187
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 20/156 (12%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS- 181
G LLIA+ L + F+RTV+L+ G G ILN+P M V +A F
Sbjct: 11 GKLLIASANLLESN-FKRTVLLMCEHNDEGSIGFILNKP-------MEFKVCEAISGFDE 62
Query: 182 -DRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFG-TKETVGCAAEMVKRN 238
D PL GGP++ + + + +G D + + ++V+ GL++G KE + + ++
Sbjct: 63 IDEPLHMGGPVQVDTVHFLHTRG--DVIDDA---QEVLPGLFWGGDKEQL---SYLINTG 114
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACS 274
+ P + RFF G GW QL +E G W A S
Sbjct: 115 VIRPSEVRFFLGYAGWSAGQLKDEFEEGSWYTADAS 150
>gi|431798766|ref|YP_007225670.1| transcriptional regulator [Echinicola vietnamensis DSM 17526]
gi|430789531|gb|AGA79660.1| putative transcriptional regulator [Echinicola vietnamensis DSM
17526]
Length = 189
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P+ G LLI+ L + F R+V+L+ G G++LN+ S++ IK++ +
Sbjct: 9 PQSGQLLISEPFLQDEN-FVRSVVLLCESNENGSFGLVLNKLSILRIKDLLDEL-----E 62
Query: 180 FSDRPLFFGGPLEEG-LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
F D +F GGP+E+ L + GD V + V Q+ + LY+G G E V +
Sbjct: 63 FLDMEVFVGGPVEQNTLHFIY---WGDPVIEGSV--QLAKDLYWG-----GNFEEFVLKY 112
Query: 239 AVGP---EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLM 295
G + FRFF G GW QL EE+ W + + S LW L M
Sbjct: 113 KAGQLNLDHFRFFIGYSGWSSGQLEEELSEKTWIICEDIDAEAIFTSSPDDLWRVALRNM 172
Query: 296 G 296
G
Sbjct: 173 G 173
>gi|357140709|ref|XP_003571906.1| PREDICTED: uncharacterized protein LOC100837578 [Brachypodium
distachyon]
Length = 1108
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPM-GPSGIILN-RPSLMSIKEMRSTVLDAAGTF 180
G +L ATEKL F+ +LI+S + G G+I+N R S + K + S++
Sbjct: 954 GSILTATEKLGAAVPFDNAQVLIVSADSHEGFHGLIINKRLSWGAFKNLDSSM----EPI 1009
Query: 181 SDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFE---QVMEGLYFGTKETVGCAAEMVK 236
P F+GGP+ +G LVS VFE QV+ GLY+G +K
Sbjct: 1010 KLAPFFYGGPVVVQGYHLVSLS--------RVVFEGYAQVIPGLYYGNIIATSRVIRGIK 1061
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAA 272
ED FF G GW QL +E+ G W V+
Sbjct: 1062 SGQQSAEDLWFFLGYVGWGYSQLFDELSEGAWHVSG 1097
>gi|386846070|ref|YP_006264083.1| putative transcriptional regulator [Actinoplanes sp. SE50/110]
gi|359833574|gb|AEV82015.1| putative transcriptional regulator [Actinoplanes sp. SE50/110]
Length = 185
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 75/159 (47%), Gaps = 13/159 (8%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
E G LL+AT L + F+RTV+L+++ EP G G++LNR + + + E VL G
Sbjct: 2 ESMTGQLLVATPTLKDPN-FDRTVVLLVAHEPGGALGVVLNRATEVPVAE----VLGNWG 56
Query: 179 TFSDRP--LFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
+ P LF GGP++ + + + + F V L GT + + E +K
Sbjct: 57 ELAGDPAVLFEGGPVQPESAICLARTRPEVKKRLTGFHPVAGAL--GTLD-LSADPEHLK 113
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
N G R F G GW QL EEI AG W V P
Sbjct: 114 ENVAG---IRVFAGYSGWSAGQLEEEITAGSWFVFDALP 149
>gi|419840198|ref|ZP_14363594.1| hypothetical protein HMPREF1053_0946 [Haemophilus haemolyticus
HK386]
gi|386908019|gb|EIJ72718.1| hypothetical protein HMPREF1053_0946 [Haemophilus haemolyticus
HK386]
Length = 185
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 20/164 (12%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAG 178
+G LIA LD F RTV+ + G G+++N+P+ +SI E+ S + +
Sbjct: 4 QGKFLIAMPHLDDY--FNRTVVFMCEHNEQGSMGLVINQPTDLSIAELYSKLNFMMKNDR 61
Query: 179 TFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK----ETVGCAAEM 234
TFS+ + GGP+ + K +E + ++ + L T ET+G
Sbjct: 62 TFSNEMVVAGGPMHSERGFILHKNTPNEFQHT---YKITDDLSMTTSADVIETLGSE--- 115
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ PE + GC WE QL +EI W VA + ++
Sbjct: 116 -----LAPEKYLIALGCSSWEAGQLEKEITDNAWLVATANDQIL 154
>gi|423345675|ref|ZP_17323364.1| hypothetical protein HMPREF1060_01036 [Parabacteroides merdae
CL03T12C32]
gi|409221410|gb|EKN14359.1| hypothetical protein HMPREF1060_01036 [Parabacteroides merdae
CL03T12C32]
Length = 198
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 112 KWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRS 171
K H P +G +LI+ L + F+R+V+L++ G G +LN+ + +S+ +
Sbjct: 9 KITHNDVLPAQGSILISEPFLQDAY-FQRSVVLLVEHTQEGSMGFVLNKKTELSVNTFFA 67
Query: 172 TVLDAAGTFSDRPLFFGGPLEEG-LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGC 230
D G F + P++ GGP+ LF + G D + + + ++ + LYF
Sbjct: 68 ---DLQG-FPEMPIYLGGPVSANRLFFIHSLG--DLIIPNSL--KINDHLYFDGD--FSA 117
Query: 231 AAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEE 290
++ +FF G GW++ QL+ EI W V+ S + L G G W++
Sbjct: 118 LIHYIQNGHSVDGKVKFFLGYSGWQEGQLHNEIDQNSWVVSHASNRNVLLAEGE-GFWKK 176
Query: 291 LLWLMGRR 298
L +G +
Sbjct: 177 SLESLGSQ 184
>gi|325577676|ref|ZP_08147951.1| alginate biosynthesis nucleoside diphosphate kinase regulator AlgH
[Haemophilus parainfluenzae ATCC 33392]
gi|419801964|ref|ZP_14327167.1| hypothetical protein HMPREF1118_0258 [Haemophilus parainfluenzae
HK262]
gi|419846147|ref|ZP_14369404.1| hypothetical protein HMPREF1119_0917 [Haemophilus parainfluenzae
HK2019]
gi|325160421|gb|EGC72547.1| alginate biosynthesis nucleoside diphosphate kinase regulator AlgH
[Haemophilus parainfluenzae ATCC 33392]
gi|385192331|gb|EIF39737.1| hypothetical protein HMPREF1118_0258 [Haemophilus parainfluenzae
HK262]
gi|386414442|gb|EIJ28998.1| hypothetical protein HMPREF1119_0917 [Haemophilus parainfluenzae
HK2019]
Length = 186
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 16/162 (9%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAG 178
+G LIA +L+ F+ TV+ + G G+++N+P+ +SI E+ S + +
Sbjct: 5 QGQFLIAMPQLEDY--FQNTVVYMCEHNEQGSMGLVINQPTDLSIAELYSKMNFMMKNDR 62
Query: 179 TFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR- 237
TFS+ + GGP+ + K E S ++ + +Y T +A++V+
Sbjct: 63 TFSNELVLAGGPVHSERGFILHKKTAKEFEHS---YKITDDMYLTT------SADIVETF 113
Query: 238 -NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+A PE + GC W QL +EI W VA S +++
Sbjct: 114 GSADAPEKYLVALGCASWTAGQLEQEIADNAWLVAPASDTIL 155
>gi|78189561|ref|YP_379899.1| hypothetical protein Cag_1601 [Chlorobium chlorochromatii CaD3]
gi|119391276|sp|Q3AQ69.1|Y1601_CHLCH RecName: Full=UPF0301 protein Cag_1601
gi|78171760|gb|ABB28856.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
Length = 188
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 19/167 (11%)
Query: 117 IHEPEK---GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV 173
++E EK G LL+A+ + + F+RTV+L+ G G ILNRP ++E
Sbjct: 3 VNEFEKLTAGKLLLASATMLESN-FKRTVLLMCEHNEEGSLGFILNRPLEFKVREAIHGF 61
Query: 174 LDAAGTFSDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFG-TKETVGCA 231
D D L GGP++ + + +G D + S ++V+ G+Y+G K+ V
Sbjct: 62 NDV-----DDVLHQGGPVQVNSIHFLHSRG--DLIHNS---QEVLPGIYWGGNKDEV--- 108
Query: 232 AEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ ++ + P + RF+ G GW QL E G W A +P VI
Sbjct: 109 SYLLNTGVMHPSEIRFYLGYAGWSAGQLFSEFEEGAWYTAEATPDVI 155
>gi|417843588|ref|ZP_12489660.1| UPF0301 protein [Haemophilus haemolyticus M21127]
gi|341949113|gb|EGT75722.1| UPF0301 protein [Haemophilus haemolyticus M21127]
Length = 186
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 20/164 (12%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAG 178
+G LIA LD F RTV+ + G G+++N+P+ +SI E+ S + +
Sbjct: 5 QGKFLIAMPHLDDY--FNRTVVFMCEHNEQGSMGLVINQPTDLSIAELYSKLNFMMKNDR 62
Query: 179 TFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK----ETVGCAAEM 234
TFS+ + GGP+ + K +E + ++ + L T ET+G
Sbjct: 63 TFSNEMVIAGGPMHSERGFILHKNTPNEFQHT---YKITDDLSMTTSADVIETLGSE--- 116
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE + GC WE QL +EI W VA + ++
Sbjct: 117 -----FAPEKYLIALGCSSWEAGQLEKEITDNAWLVATANDQIL 155
>gi|348175258|ref|ZP_08882152.1| hypothetical protein SspiN1_32739 [Saccharopolyspora spinosa NRRL
18395]
Length = 192
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 83/184 (45%), Gaps = 24/184 (13%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR-PSLMSIKEMRSTVLDAAGT 179
E G LL+A +L + F RTV+ ++ G G++LNR PS +++ + VL G
Sbjct: 9 EPGTLLVAAPQLLDRN-FRRTVVYVIHHRAEGTLGVVLNRRPSEVAVHD----VLPKWGQ 63
Query: 180 FSDRP--LFFGGPLEE--GLFLVSPKGG---GDEVGKSGVFEQVMEGLYFGTKETVGCAA 232
+ P LF GGP+E+ + L + + G G G GV V G + G
Sbjct: 64 HASEPQSLFVGGPVEQRTAICLATLRAGESVGAIAGMVGVRGPV------GLVDLDGDPN 117
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
++V R RFF G GWE QL +EI G W V P + + G LW +L
Sbjct: 118 DLVPRA----RGLRFFAGYAGWEPGQLADEIERGDWIVVPALPDDVIADPGA-ELWGRVL 172
Query: 293 WLMG 296
G
Sbjct: 173 RRQG 176
>gi|145219947|ref|YP_001130656.1| hypothetical protein Cvib_1142 [Chlorobium phaeovibrioides DSM 265]
gi|145206111|gb|ABP37154.1| protein of unknown function DUF179 [Chlorobium phaeovibrioides DSM
265]
Length = 187
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 20/160 (12%)
Query: 123 GCLLIATEKL-DGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
G LLIA+ L +G F+RTV+L+ G ILNRP M V +A F
Sbjct: 11 GKLLIASANLMEGT--FKRTVLLMCEHGSEGSVAFILNRP-------MEFKVSEAIAGFG 61
Query: 182 D--RPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
D PL GGP++ + ++ + +G D V S E+++ GL++G ++ + ++
Sbjct: 62 DVEEPLLMGGPVQADRVYFMHTRG--DLVEAS---EEILPGLFWGGEQE--ELSYLLNTG 114
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ P + RFF G GW QL EE G W + ++
Sbjct: 115 VLPPSEVRFFLGYSGWNAGQLEEEFEVGSWYTTDATRELV 154
>gi|154492911|ref|ZP_02032537.1| hypothetical protein PARMER_02550 [Parabacteroides merdae ATCC
43184]
gi|154087216|gb|EDN86261.1| putative ACR, COG1678 [Parabacteroides merdae ATCC 43184]
Length = 198
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 19/191 (9%)
Query: 112 KWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRS 171
K H P +G +LI+ L + F+R+V+L++ G G +LN+ + +S+ +
Sbjct: 9 KITHNDVLPAQGSILISEPFLQDAY-FQRSVVLLVEHTQEGSMGFVLNKKTELSV----N 63
Query: 172 TVLDAAGTFSDRPLFFGGPLEEG-LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGC 230
T F + P++ GGP+ LF + G D + + + ++ + LYF G
Sbjct: 64 TFFADLQGFPEMPIYLGGPVSANRLFFIHSLG--DLIIPNSL--KINDHLYFD-----GD 114
Query: 231 AAEMVKRNAVG-PED--FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGL 287
+ ++ G P D +FF G GW++ QL+ EI W V+ S + L G G
Sbjct: 115 FSALIHYIQNGHPVDGKVKFFLGYSGWQEGQLHNEIDQNSWVVSHASNRNVLLAEGE-GF 173
Query: 288 WEELLWLMGRR 298
W++ L +G +
Sbjct: 174 WKKSLESLGSQ 184
>gi|240949406|ref|ZP_04753747.1| hypothetical protein AM305_10696 [Actinobacillus minor NM305]
gi|240296155|gb|EER46811.1| hypothetical protein AM305_10696 [Actinobacillus minor NM305]
Length = 187
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 15/174 (8%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE----MRSTVLDAA 177
+G LIAT ++D FERTV+ I G G+I+N P+ +S+ E M + +
Sbjct: 6 QGKFLIATPEMDD-EFFERTVVYICEHNSNGAMGLIINVPTDLSVLELLTRMDFQMANQR 64
Query: 178 GTFSDRPLFFGGPLEEGL-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
D+ + GGP+ + F++ K D + V +++M +++G
Sbjct: 65 DYKKDQMVLSGGPVSQDRGFIIHTKTERDFLHSYHVTDRIMLTTSGDVLDSLGTPD---- 120
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEE 290
PE F GC W +QL EI +W + + + E+G L W E
Sbjct: 121 ----APEKFVVCLGCATWSSDQLENEIARNFWIYSEANDKTL-FETGYLDRWVE 169
>gi|338211547|ref|YP_004655600.1| hypothetical protein [Runella slithyformis DSM 19594]
gi|336305366|gb|AEI48468.1| UPF0301 protein yqgE [Runella slithyformis DSM 19594]
Length = 184
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 32/187 (17%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE-MRSTVLDAA 177
+P KG LLIA E G FER+V+ + G G++ N+ + + + + ++ V++
Sbjct: 5 KPAKGKLLIA-EPFLGDPNFERSVVFLCEHNEHGTFGLVFNQTTNLRLNDVLKEPVVN-- 61
Query: 178 GTFSDRPLFFGGPLEEGL--------FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVG 229
+ PL+ GGP+E+ F+ G+++ SG FEQ+ L G
Sbjct: 62 ----NLPLYLGGPVEQNTLHFLHRLSFIEDAVPVGEDLYWSGDFEQITSLLNVG------ 111
Query: 230 CAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWE 289
+ D RFF G GW QL EE+ W ++ I ++ W
Sbjct: 112 ---------KITDRDLRFFIGYSGWSAGQLEEELSKNAWIISDTDAGFI-FDTPVDQFWR 161
Query: 290 ELLWLMG 296
+L MG
Sbjct: 162 AVLRKMG 168
>gi|418465415|ref|ZP_13036352.1| hypothetical protein RHAA1_07013 [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|359756347|gb|EHK90506.1| hypothetical protein RHAA1_07013 [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 185
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM---RSTVLDAAGTFS 181
LLIA LD + F RTVI I G G++LN+P+ +SI E+ + ++ T++
Sbjct: 7 LLIAMPNLDDSY-FYRTVIYICEHNEKGSMGLVLNQPTDLSIAELGAKMNFMMVTHRTYN 65
Query: 182 DRPLFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
D+ + GGP ++ G L + K D + V + +M +T G E
Sbjct: 66 DKLVLAGGPVNIDRGFILHTNTKVSFDHSYR--VNDNLMLTTSADVVDTFGTMLE----- 118
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE + GC WE QL +EI W V + ++
Sbjct: 119 ---PEKYLVTLGCASWEANQLEQEIMNNSWLVVPATEQIL 155
>gi|365875439|ref|ZP_09414968.1| transcriptional regulator [Elizabethkingia anophelis Ag1]
gi|442588162|ref|ZP_21006974.1| transcriptional regulator [Elizabethkingia anophelis R26]
gi|365757087|gb|EHM98997.1| transcriptional regulator [Elizabethkingia anophelis Ag1]
gi|442561867|gb|ELR79090.1| transcriptional regulator [Elizabethkingia anophelis R26]
Length = 182
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 20/178 (11%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
KG +LI+T + G IF R+V+LI+ G G+ILN+ + K + +
Sbjct: 6 KGKILISTPDISG-DIFSRSVVLIIEHNESGAFGLILNKKNKFLSKRFNKIMQN------ 58
Query: 182 DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
D ++ GGP+ + +G + V ++ + Y + V E++ + +
Sbjct: 59 DIEVYEGGPISQDKIFFIIRGER----ATSVNSEINDDYYL--TDNVEEVIELIVKQELE 112
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGL---ESGTLGLWEELLWLMG 296
++ + F G GW +QL EI+ WTV VI L ES LW++++ +G
Sbjct: 113 TKNIKIFSGYSGWSPQQLEGEIKNKMWTVI----EVINLDYTESNDQNLWKKIMQGLG 166
>gi|224000786|ref|XP_002290065.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973487|gb|EED91817.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 632
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 47/241 (19%)
Query: 61 DDHHKP-LIDADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHE 119
D++ P L D DWRSFRARLV + Q ++ + S WA+
Sbjct: 54 DENDAPNLDDDDWRSFRARLVLENK----QGEQGA-------------SSSTTWAYDSGL 96
Query: 120 PEKGCLLIATEKLDGVHI------FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV 173
E G +++A + D + F + V+L+ GIILNRP+ + + +
Sbjct: 97 IEPGSIILAKTEPDFCYFGLSQQYFHKAVLLVTYHSSEFTKGIILNRPTNLHLDD--EDF 154
Query: 174 LDAAG---TFSDRPL--------FFGGPLEEGLFLVSPK-----GGGDEVGKSGVFEQVM 217
+D +G SD L +FGG + G++ P+ +GK+ + E+++
Sbjct: 155 IDESGEPFIKSDNALEDMNSWRIWFGGDVN-GMYSDDPEIVCLHSIDSNLGKN-LSEEII 212
Query: 218 EGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSV 277
+ ++ E A +++ N +DF F G CGW QL +E++ W + +
Sbjct: 213 KNIFLTNYE---GARKLIDANEATSQDFWVFAGYCGWSAGQLLDELKHESWYMVSADSQT 269
Query: 278 I 278
+
Sbjct: 270 V 270
>gi|150008067|ref|YP_001302810.1| transcriptional regulator [Parabacteroides distasonis ATCC 8503]
gi|256840753|ref|ZP_05546261.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262381359|ref|ZP_06074497.1| UPF0301 protein [Bacteroides sp. 2_1_33B]
gi|301309836|ref|ZP_07215775.1| putative transcriptional regulator [Bacteroides sp. 20_3]
gi|423331412|ref|ZP_17309196.1| hypothetical protein HMPREF1075_01209 [Parabacteroides distasonis
CL03T12C09]
gi|423340309|ref|ZP_17318048.1| hypothetical protein HMPREF1059_03973 [Parabacteroides distasonis
CL09T03C24]
gi|166231372|sp|A6LBX4.1|Y1431_PARD8 RecName: Full=UPF0301 protein BDI_1431
gi|149936491|gb|ABR43188.1| putative transcriptional regulator [Parabacteroides distasonis ATCC
8503]
gi|256738025|gb|EEU51351.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262296536|gb|EEY84466.1| UPF0301 protein [Bacteroides sp. 2_1_33B]
gi|300831410|gb|EFK62041.1| putative transcriptional regulator [Bacteroides sp. 20_3]
gi|409227744|gb|EKN20640.1| hypothetical protein HMPREF1059_03973 [Parabacteroides distasonis
CL09T03C24]
gi|409230708|gb|EKN23570.1| hypothetical protein HMPREF1075_01209 [Parabacteroides distasonis
CL03T12C09]
Length = 198
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 22/196 (11%)
Query: 112 KWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRS 171
K H P +G +LIA L + F+R+V+L++ G G +LN+ + + + +
Sbjct: 9 KITHNDVLPIQGSILIAEPFLQDAY-FQRSVVLLIEHTEHGSMGFVLNKKTDLIV----N 63
Query: 172 TVLDAAGTFSDRPLFFGGPLEEG-LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGC 230
+ F + P++ GGP+ LF + G D + + ++ + LYF
Sbjct: 64 SFFKEFAEFPEIPIYLGGPVSPNRLFFIHSLG--DNIIPDAL--KINDYLYFDGD----- 114
Query: 231 AAEMVKRNAVG--PED--FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLG 286
+KR + P D +FF G GW + QLN EI+ W V+ + I L + G
Sbjct: 115 -FNALKRYILNGHPIDGKVKFFLGYSGWTEGQLNHEIKRNSWAVSHITTDNI-LSADGEG 172
Query: 287 LWEELLWLMGR-RKVW 301
W++ + L+G K W
Sbjct: 173 YWKDSVELLGNDYKTW 188
>gi|325104082|ref|YP_004273736.1| hypothetical protein [Pedobacter saltans DSM 12145]
gi|324972930|gb|ADY51914.1| protein of unknown function DUF179 [Pedobacter saltans DSM 12145]
Length = 187
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 91/187 (48%), Gaps = 28/187 (14%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P+ G +LIA + + F+R+V+++++ + G G ILN+ S + +K++ D
Sbjct: 7 PQIGNILIAEPFMLDDN-FKRSVVILVAEDEEGHVGYILNQRSNLLVKDLLVEFTDC--- 62
Query: 180 FSDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFG-------TKETVGCA 231
+ P++ GGP+ + L V D++ + + +G+Y+G T+ ++G
Sbjct: 63 --NFPVYIGGPVSPDTLHFV--HSCPDKIFDGDL---IRDGIYWGGDFEMLRTQLSLGNI 115
Query: 232 AEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEEL 291
+E E+ RFF G GW+KEQL E+ W V+ I E + +W+E
Sbjct: 116 SE---------EEIRFFLGYSGWDKEQLKRELNENSWIVSDRINPAIVFEHSEIDIWKEA 166
Query: 292 LWLMGRR 298
+ +G +
Sbjct: 167 IINLGEK 173
>gi|322514741|ref|ZP_08067767.1| YqgE like protein [Actinobacillus ureae ATCC 25976]
gi|322119336|gb|EFX91452.1| YqgE like protein [Actinobacillus ureae ATCC 25976]
Length = 186
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 15/180 (8%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE----MRSTVLDAA 177
+G LIAT ++D + F+RTV+ I G G+++N P+ +S+ E M + +
Sbjct: 6 QGKFLIATPEIDDDY-FDRTVVYICENNNNGAMGLVINTPTDLSVLELITRMDFQMANQR 64
Query: 178 GTFSDRPLFFGGPLEEGL-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
D+ + GGP+ + F++ K + + V + ++ +++G
Sbjct: 65 NYHKDQMVLSGGPVSQDRGFIIHTKTEQEFLHSYRVTDNILLTTSGDVLDSLGKLE---- 120
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
PE F GC W+ EQL +EI YW V+ + + E+G L W E ++G
Sbjct: 121 ----APEKFIVCLGCATWKPEQLEQEIARNYWLVSDANEKTL-FETGYLERWVEANEMLG 175
>gi|416053573|ref|ZP_11578928.1| hypothetical protein SC1083_2121 [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|347990911|gb|EGY32427.1| hypothetical protein SC1083_2121 [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
Length = 186
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM---RSTVLDAAGTFS 181
LLIA LD + F RTVI I G G++LN+P+ +SI E+ + ++ T++
Sbjct: 8 LLIAMPNLDDSY-FYRTVIYICEHNEKGSMGLVLNQPTDLSIAELGAKMNFMMVTHRTYN 66
Query: 182 DRPLFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
D+ + GGP ++ G L + K D + V + +M +T G E
Sbjct: 67 DKLVLAGGPVNIDRGFILHTNTKVSFDHSYR--VNDNLMLTTSADVVDTFGTMLE----- 119
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE + GC WE QL +EI W V + ++
Sbjct: 120 ---PEKYLVTLGCASWEANQLEQEIMNNSWLVVPATEQIL 156
>gi|372208759|ref|ZP_09496561.1| hypothetical protein FbacS_01505 [Flavobacteriaceae bacterium S85]
Length = 185
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 15/181 (8%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P KG LLIA + G F R+++L+ G I+N+P S++++ +
Sbjct: 5 KPSKGRLLIAEPSILGDVSFNRSIVLLTEHNSNSSIGFIINKPLDYSLQDLIPEI----- 59
Query: 179 TFSDRPLFFGGPLEE-GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
D ++ GGP+E+ L+ + E+ + + +V +G+Y+G E++
Sbjct: 60 -NCDFKVYQGGPVEQDNLYFIHKI---PELLPNSI--EVTKGIYWGGD--FDKLIELLNN 111
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGR 297
V +D RFF G GW K QL +E + W V + I + LW+ L G
Sbjct: 112 GQVQSQDIRFFLGYSGWSKGQLYQEWKTDSWLVTENNHQNI-FNTHDKDLWKNHLLEFGS 170
Query: 298 R 298
+
Sbjct: 171 K 171
>gi|423723444|ref|ZP_17697593.1| hypothetical protein HMPREF1078_01580 [Parabacteroides merdae
CL09T00C40]
gi|409241470|gb|EKN34239.1| hypothetical protein HMPREF1078_01580 [Parabacteroides merdae
CL09T00C40]
Length = 198
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 19/191 (9%)
Query: 112 KWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRS 171
K H P +G +LI+ L + F+R+V+L++ G G +LN+ + +S+ +
Sbjct: 9 KITHNDVLPAQGSILISEPFLQDAY-FQRSVVLLVEHTQEGSMGFVLNKKTELSVNTFFA 67
Query: 172 TVLDAAGTFSDRPLFFGGPLEEG-LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGC 230
D G F + P++ GGP+ LF + G D + + + ++ + LYF G
Sbjct: 68 ---DLQG-FPEIPIYLGGPVSANRLFFIHSLG--DLIIPNSL--KINDHLYFD-----GD 114
Query: 231 AAEMVKRNAVG-PED--FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGL 287
+ ++ G P D +FF G GW++ QL+ EI W V+ S + L G G
Sbjct: 115 FSALIHYIQNGHPVDGKVKFFLGYSGWQEGQLHNEIDQNSWVVSHASNRNVLLAEGE-GF 173
Query: 288 WEELLWLMGRR 298
W++ L +G +
Sbjct: 174 WKKSLESLGSQ 184
>gi|329904541|ref|ZP_08273848.1| YqgE [Oxalobacteraceae bacterium IMCC9480]
gi|327547935|gb|EGF32684.1| YqgE [Oxalobacteraceae bacterium IMCC9480]
Length = 219
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 65/150 (43%), Gaps = 18/150 (12%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIK------EMRSTVLDAAGTFSDRPLFFGGP 190
+F TVI + G G+I+N+P+ M+++ ++ + T D P+ FGGP
Sbjct: 50 VFGGTVIYLCEHNARGALGVIINKPTDMTLQVLFERVDLTLEINPRHPTLPDHPVMFGGP 109
Query: 191 --LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFF 248
LE G L +P G + K V + + T + V A + GPE
Sbjct: 110 VQLERGFVLHAPPGAFSSMMK------VTDDIALTTSKDVLEAVA----SGQGPERLLVT 159
Query: 249 DGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GC GW QL +EI W A P+VI
Sbjct: 160 LGCSGWSAGQLEDEIIRNGWLTVAADPAVI 189
>gi|427383034|ref|ZP_18879754.1| hypothetical protein HMPREF9447_00787 [Bacteroides oleiciplenus YIT
12058]
gi|425729485|gb|EKU92337.1| hypothetical protein HMPREF9447_00787 [Bacteroides oleiciplenus YIT
12058]
Length = 197
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P +G +LI+ E +F R+VIL++ G G++LN+P + + + VL
Sbjct: 17 PSRGKVLIS-EPFLYDEMFGRSVILLIDHTMDGTMGMVLNKPLPLCLND----VLKEFKD 71
Query: 180 FSDRPLFFGGPLEEG--LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
P++ GGPL +L + K D + Q+ +G Y + +++
Sbjct: 72 VDKIPIYKGGPLSTDTLFYLHTLKDIEDSL-------QIGKGFYL-NGDFDAIRRYILQG 123
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL-WLMG 296
N + + RFF G GWE +QL EI W + + + + E G+ LW+ +L L G
Sbjct: 124 NEITGK-IRFFLGYSGWEHDQLCREIEENTWLIGSADITSLMDEKGSSKLWKNVLGQLGG 182
Query: 297 RRKVW 301
+ K W
Sbjct: 183 KYKTW 187
>gi|255014906|ref|ZP_05287032.1| putative transcriptional regulator [Bacteroides sp. 2_1_7]
gi|410105384|ref|ZP_11300292.1| hypothetical protein HMPREF0999_04064 [Parabacteroides sp. D25]
gi|409232594|gb|EKN25440.1| hypothetical protein HMPREF0999_04064 [Parabacteroides sp. D25]
Length = 198
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 14/192 (7%)
Query: 112 KWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRS 171
K H P +G +LIA L + F+R+V+L++ G G +LN+ + + + +
Sbjct: 9 KITHNDVLPIQGSILIAEPFLQDAY-FQRSVVLLIEHTEHGSMGFVLNKKTDLIV----N 63
Query: 172 TVLDAAGTFSDRPLFFGGPLEEG-LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGC 230
+ F + P++ GGP+ LF + G D + + ++ + LYF +
Sbjct: 64 SFFKEFAEFPEIPIYLGGPVSPNRLFFIHSLG--DNIIPDAL--KINDYLYF-DGDFNAL 118
Query: 231 AAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEE 290
++ + + + +FF G GW + QLN EI+ W V+ + I L + G W++
Sbjct: 119 KRYILNGHPINGK-VKFFLGYSGWTEGQLNHEIKRNSWAVSHITTDNI-LSADGEGYWKD 176
Query: 291 LLWLMGR-RKVW 301
+ L+G K W
Sbjct: 177 SVELLGNDYKTW 188
>gi|409098589|ref|ZP_11218613.1| hypothetical protein PagrP_09329 [Pedobacter agri PB92]
Length = 195
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 16/182 (8%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P+ G LLI +E F+R+V+L+ G G ILN+ + +K++ + DA
Sbjct: 14 KPKTGRLLI-SEPFMADPNFKRSVVLLTEHGADGTVGYILNQVGNLLLKDVIQDLWDA-- 70
Query: 179 TFSDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK-ETVGCAAEMVK 236
+ ++FGGP+ + L + + G E++ G+Y+G ET+ ++
Sbjct: 71 ---NNHIYFGGPVAADTLHFIHRAYDKLQSG-----EEIGNGIYWGGNFETLKI---LIN 119
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
NA+ ++ +FF G GW+ QL E+ W V S + + LW +++ +G
Sbjct: 120 SNAIQEDEIKFFMGYSGWDDGQLTRELEQNAWMVGDISHPDLIFNNDDEKLWRDVIVNLG 179
Query: 297 RR 298
+
Sbjct: 180 PK 181
>gi|354614959|ref|ZP_09032779.1| UPF0301 protein yqgE [Saccharomonospora paurometabolica YIM 90007]
gi|353220685|gb|EHB85103.1| UPF0301 protein yqgE [Saccharomonospora paurometabolica YIM 90007]
Length = 193
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 81/185 (43%), Gaps = 23/185 (12%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
E E G LL+A + + F RTV+ ++ G G++LNRPS + + E VL G
Sbjct: 9 EVEPGTLLVAAPTMVDPN-FRRTVVFVIDHRDEGTLGVVLNRPSEVEVDE----VLPNWG 63
Query: 179 --TFSDRPLFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE- 233
+ R +F GGP+E+ L L + + G GV G V AE
Sbjct: 64 EHVVAPRSVFVGGPVEKKTALCLAALRTGETAASVPGVIA------VRGPVALVDLDAEP 117
Query: 234 --MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEEL 291
+V+R R F G GW+ QL+EEI G W + P + L + LW ++
Sbjct: 118 DALVQRV----RGMRVFAGYAGWDAGQLSEEIDRGDWLIVPALPGDV-LATPDGDLWSQV 172
Query: 292 LWLMG 296
L G
Sbjct: 173 LRRQG 177
>gi|255037821|ref|YP_003088442.1| hypothetical protein Dfer_4074 [Dyadobacter fermentans DSM 18053]
gi|254950577|gb|ACT95277.1| protein of unknown function DUF179 [Dyadobacter fermentans DSM
18053]
Length = 186
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 13/175 (7%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
KG LLIA L G FER VIL+ G G +LN+ + + + ++ + +
Sbjct: 9 KGSLLIAKPFL-GDPNFERGVILMCEHNEEGSFGFVLNQTTDLFLGDVLEETI-----YQ 62
Query: 182 DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
D L GGP+E+ + G + + + V G F +T ++ N +
Sbjct: 63 DITLHLGGPVEKNTLHFIHRRPDLVTGGTEIMKDVYWGGDFNNVKT------LLNLNTLK 116
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
ED FF G GW QL++EI+ W +++ S + + W E+L MG
Sbjct: 117 QEDVMFFIGYSGWSGGQLDDEIKQDSWIISSTSSDFL-FSTPPGNFWREVLRSMG 170
>gi|386389202|ref|ZP_10074024.1| hypothetical protein HMPREF1054_1593 [Haemophilus
paraphrohaemolyticus HK411]
gi|385695958|gb|EIG26489.1| hypothetical protein HMPREF1054_1593 [Haemophilus
paraphrohaemolyticus HK411]
Length = 187
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 15/183 (8%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE----MRSTVL 174
E +G LIAT +D + F+R V+ I G G+I+N P+ +S+ E M +
Sbjct: 3 ENLQGKFLIATPDMDDPY-FDRAVVYICEHNNNGAMGLIINMPTDLSVLELLTRMDFQMA 61
Query: 175 DAAGTFSDRPLFFGGPLEEGL-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
+ D+ + GGP+ + F+V K + V + +M +T+G
Sbjct: 62 NQRDYKKDQMVLSGGPVNQDRGFIVHTKTAQSFLHSYKVTDDIMLTTSGDVLDTLGTTD- 120
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLW 293
PE F GC W EQL +EI W + + + ++G L W E
Sbjct: 121 -------APEHFIVCLGCSTWNSEQLQQEIAQNMWIYSDANNKTL-FKTGYLDRWLEANE 172
Query: 294 LMG 296
+MG
Sbjct: 173 MMG 175
>gi|387120765|ref|YP_006286648.1| YqgE like protein [Aggregatibacter actinomycetemcomitans D7S-1]
gi|385875257|gb|AFI86816.1| YqgE like protein [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 185
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM---RSTVLDAAGTFS 181
LLIA LD + F RTVI I G G++LN+P+ +SI E+ + ++ T++
Sbjct: 7 LLIAMPNLDDSY-FYRTVIYICDHNEKGSMGLVLNQPTDLSIAELGAKMNFMMVTHRTYN 65
Query: 182 DRPLFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
D+ + GGP ++ G L + K D + V + +M +T G E
Sbjct: 66 DKLILAGGPVNIDRGFILHTNTKVPFDHSYR--VSDNLMLTTSADVVDTFGTMLE----- 118
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE + GC WE QL +EI W V + ++
Sbjct: 119 ---PEKYLVTLGCASWEANQLEQEIMNNSWLVVPATEQIL 155
>gi|415763251|ref|ZP_11482054.1| hypothetical protein D17P3_1558 [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|416032386|ref|ZP_11572796.1| YqgE like protein [Aggregatibacter actinomycetemcomitans serotype a
str. H5P1]
gi|429732372|ref|ZP_19266986.1| putative ACR [Aggregatibacter actinomycetemcomitans Y4]
gi|348000116|gb|EGY40914.1| YqgE like protein [Aggregatibacter actinomycetemcomitans serotype a
str. H5P1]
gi|348654675|gb|EGY70276.1| hypothetical protein D17P3_1558 [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|429156420|gb|EKX99052.1| putative ACR [Aggregatibacter actinomycetemcomitans Y4]
Length = 186
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM---RSTVLDAAGTFS 181
LLIA LD + F RTVI I G G++LN+P+ +SI E+ + ++ T++
Sbjct: 8 LLIAMPNLDDSY-FYRTVIYICDHNEKGSMGLVLNQPTDLSIAELGAKMNFMMVTHRTYN 66
Query: 182 DRPLFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
D+ + GGP ++ G L + K D + V + +M +T G E
Sbjct: 67 DKLILAGGPVNIDRGFILHTNTKVPFDHSYR--VSDNLMLTTSADVVDTFGTMLE----- 119
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE + GC WE QL +EI W V + ++
Sbjct: 120 ---PEKYLVTLGCASWEANQLEQEIMNNSWLVVPATEQIL 156
>gi|376316230|emb|CCF99627.1| protein containing DUF179 [uncultured Flavobacteriia bacterium]
Length = 192
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P G +L++ LD + F R V+L+ G G +LN + + E V+D
Sbjct: 12 PAPGNVLLSEPFLDDPY-FGRKVVLLCEHNEEGSFGFVLNNYVDIDVDE----VMDDLPK 66
Query: 180 FSDRPLFFGGPLEEG-LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
+ R + GGP++ G L+ + + +++ +S V+ G++ G +M++
Sbjct: 67 LNAR-ISVGGPVKNGNLYYLHTR---EDIAES---IPVVPGVFMGG--NFDQIRDMLQAG 117
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPS-VIGLESGTLGLWEELLWLMG 296
+ +D RFF G GW QL EEIR+ W VA +PS ++ + W+ L+ MG
Sbjct: 118 QLQAQDIRFFIGYSGWSPAQLQEEIRSRSWFVADVAPSDIMRTDEDNEDYWKRLISEMG 176
>gi|417841806|ref|ZP_12487906.1| UPF0301 protein [Haemophilus haemolyticus M19501]
gi|341948575|gb|EGT75200.1| UPF0301 protein [Haemophilus haemolyticus M19501]
Length = 186
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 20/164 (12%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAG 178
+G LIA L+ F RTV+ + G G+++N+P+ +SI E+ S + +
Sbjct: 5 QGKFLIAMPHLEDY--FNRTVVFMCEHNEQGSMGLVINQPTDLSIAELYSKLNFMMKNDR 62
Query: 179 TFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK----ETVGCAAEM 234
TFS+ + GGP+ + K +E + ++ + L T ET+G
Sbjct: 63 TFSNEMVVAGGPMHNERGFILHKNTPNEFQHT---YKITDDLSMTTSADVIETLGSE--- 116
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ PE + GC WE QL +EI W VA + ++
Sbjct: 117 -----LAPEKYLIALGCSSWEAGQLEKEITDNAWLVATANDQIL 155
>gi|298376579|ref|ZP_06986534.1| transcriptional regulator [Bacteroides sp. 3_1_19]
gi|298266457|gb|EFI08115.1| transcriptional regulator [Bacteroides sp. 3_1_19]
Length = 198
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 14/192 (7%)
Query: 112 KWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRS 171
K H P +G +LI+ L + F+R+V+L++ G G +LN+ + + + +
Sbjct: 9 KITHNDVLPAQGSILISEPFLQDAY-FQRSVVLLIEHTEHGSMGFVLNKKTDLIV----N 63
Query: 172 TVLDAAGTFSDRPLFFGGPLEEG-LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGC 230
+ F + P++ GGP+ LF + G D + + ++ + LYF +
Sbjct: 64 SFFKEFAEFPEIPIYLGGPVSPNRLFFIHSLG--DNIIPDAL--KINDYLYF-DGDFNAL 118
Query: 231 AAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEE 290
++ + + + +FF G GW + QLN EI+ W V+ + I L + G W++
Sbjct: 119 KRYILNGHPINGK-VKFFLGYSGWTEGQLNHEIKRNSWAVSHITTDNI-LSADGEGYWKD 176
Query: 291 LLWLMGR-RKVW 301
+ L+G K W
Sbjct: 177 SVELLGNDYKTW 188
>gi|119715525|ref|YP_922490.1| hypothetical protein Noca_1289 [Nocardioides sp. JS614]
gi|119536186|gb|ABL80803.1| protein of unknown function DUF179 [Nocardioides sp. JS614]
Length = 191
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ E G LL+AT L + F TV+L+L ++ G G++LNRPS + + + VLD
Sbjct: 7 MTEARAGMLLVATPALLDPN-FADTVVLLLDVDEQGALGVVLNRPSAIPVDD----VLDG 61
Query: 177 AGTFSDRP--LFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
G + P LF GGP+ +G V+ D+V V +V++G G + + E
Sbjct: 62 WGDVAAEPEVLFQGGPVGLQGALAVALLARADDV---PVGFRVVDG-RLGLVD-LDTPLE 116
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+V+ G E R F G GW +QL +EI G W V + S LW ++L
Sbjct: 117 LVRG---GLEGLRVFAGYAGWGADQLRDEIEEGSWYVVPGEARDV-FRSDASDLWRDVL 171
>gi|223042062|ref|ZP_03612238.1| putative transcriptional regulator [Actinobacillus minor 202]
gi|223017137|gb|EEF15573.1| putative transcriptional regulator [Actinobacillus minor 202]
Length = 187
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 15/174 (8%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE----MRSTVLDAA 177
+G LIAT ++D FER VI I G G+I+N P+ +S+ E M + +
Sbjct: 6 QGKFLIATPEMDD-EFFERAVIYICEHNSNGAMGLIINVPTDLSVLELLTRMDFQMANQR 64
Query: 178 GTFSDRPLFFGGPLEEGL-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
D+ + GGP+ + F++ K D + V +++M +++G
Sbjct: 65 DYKKDQMVLSGGPVSQDRGFIIHTKTEKDFLHSYHVTDRIMLTTSGDVLDSLGTPD---- 120
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEE 290
PE F GC W +QL EI +W + + + E+G L W E
Sbjct: 121 ----APEKFVVCLGCATWSSDQLENEIARNFWIYSEANDKTL-FETGYLDRWVE 169
>gi|416067819|ref|ZP_11582501.1| hypothetical protein D18P1_0607 [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348001763|gb|EGY42495.1| hypothetical protein D18P1_0607 [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
Length = 186
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM---RSTVLDAAGTFS 181
LLIA LD + F RTVI I G G++LN+P+ +SI E+ + ++ T++
Sbjct: 8 LLIAMPNLDDSY-FYRTVIYICDHNEKGSMGLVLNQPTDLSIAELGAKMNFMMVTHRTYN 66
Query: 182 DRPLFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
D+ + GGP ++ G L + K D + V + +M +T G E
Sbjct: 67 DKLVLAGGPVNIDRGFILHTNTKVPFDHSYR--VSDNLMLTTSADVVDTFGTMLE----- 119
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE + GC WE QL +EI W V + ++
Sbjct: 120 ---PEKYLVTLGCASWEANQLEQEIMNNSWLVVPATEQIL 156
>gi|183222720|ref|YP_001840716.1| hypothetical protein LEPBI_I3376 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189912752|ref|YP_001964307.1| transcriptional regulator [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167777428|gb|ABZ95729.1| Transcriptional regulator [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167781142|gb|ABZ99440.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 188
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 81/172 (47%), Gaps = 13/172 (7%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
+G LLI+ + F ++V+L++ + G G++LN+P+ +++ + + D S
Sbjct: 9 RGKLLISNSSVIQ-DFFHKSVVLMVDHDDDGAFGLVLNKPTDQTMESLIKNLPDTV--HS 65
Query: 182 DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
++P++ GGP++ VS G + GV +V+ G+Y + E++ + +
Sbjct: 66 NKPVYAGGPVDN--LFVSILHNGKQTADPGV--EVVPGIYMA--RSFDTMLEVLSSDQI- 118
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAA-CSPSVIGLESGTLGLWEELL 292
FR G GW QL E W V+ S++ E + +W+E L
Sbjct: 119 --QFRVLQGYAGWSSGQLESEFDRLSWVVSDLVDDSIVFKEDESEVIWKEAL 168
>gi|392398736|ref|YP_006435337.1| transcriptional regulator [Flexibacter litoralis DSM 6794]
gi|390529814|gb|AFM05544.1| putative transcriptional regulator [Flexibacter litoralis DSM 6794]
Length = 191
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 19/180 (10%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
+ G L+A LD + F+RTVIL+ G G+++NR + +S+ E + +L+
Sbjct: 15 QAGYFLLAEPLLDDPN-FDRTVILVCQHSEEGSFGLVVNRQTEISVSE-ATDLLEI---- 68
Query: 181 SDRPLFFGGPLEEGL--FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
+ LF GGP+E+ FL + + + S E + G F + + E+ K N
Sbjct: 69 -ENKLFVGGPVEQNTMHFLHTISQLEESLLIS---ENIFWGGDFEHLQELALKGEITKEN 124
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRR 298
RFF G GW + QL+ E+ W ++ +P ++ E LW +L MG +
Sbjct: 125 ------IRFFVGYSGWSELQLDAELENNTWIISKINPQIM-FEYEPEELWSAILKEMGGK 177
>gi|392963943|ref|ZP_10329364.1| protein of unknown function DUF179 [Fibrisoma limi BUZ 3]
gi|387846838|emb|CCH51408.1| protein of unknown function DUF179 [Fibrisoma limi BUZ 3]
Length = 186
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 18/177 (10%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
G LL+A E G FER+V+L+ G G+++N+ + + + ++ + ++
Sbjct: 10 NGNLLVA-EPFLGDSNFERSVVLVCEHSEAGTFGLVMNQQTNLHLSDVIEDI------YA 62
Query: 182 DRPLFFGGPLEEG-LFLVSPKGGGDEVGKSGVFEQVMEGLYF-GTKETVGCAAEMVKRNA 239
D PLF GGP+++ L + + D + S ++MEGL++ G + + A V
Sbjct: 63 DVPLFVGGPVQQNTLHFIHRRP--DLIDNS---IRIMEGLFWSGDFDEIKRA---VNLGT 114
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
+ D RFF G GW + QL +E+ W V + ++ + W +L MG
Sbjct: 115 LTERDARFFVGYSGWSEGQLEDELEQKAWIVTRTDADFL-FDTPSDQFWRGVLKRMG 170
>gi|405365030|ref|ZP_11026476.1| UPF0301 protein YqgE [Chondromyces apiculatus DSM 436]
gi|397089595|gb|EJJ20504.1| UPF0301 protein YqgE [Myxococcus sp. (contaminant ex DSM 436)]
Length = 181
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 82/182 (45%), Gaps = 31/182 (17%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM-RSTVLDAAGTFSDR 183
LL+A +L G F R+V+L+L G G+++NR + +++ E+ R L A +
Sbjct: 8 LLVAMPQL-GDPNFYRSVVLMLEHSETGSMGLVINRSAPLTLGELARGQNLSVAAGRKEH 66
Query: 184 PLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
P+F GGP+E G L ++ V+ GL+ V +A+G
Sbjct: 67 PVFLGGPVEPQRGFVLHDDPEQREK-------HAVLPGLFLS-----------VTLDALG 108
Query: 242 P------EDFRFFDGCCGWEKEQLNEEIRAGYWTVA-ACSPSVIGLESGTLGLWEELLWL 294
P RF G GW +Q+ EI AG W A + SV+GLE LW+ L
Sbjct: 109 PLLTNPNPRLRFCLGYAGWGPKQIESEIAAGSWLFTEATTESVLGLEPSK--LWDTTLRS 166
Query: 295 MG 296
MG
Sbjct: 167 MG 168
>gi|442319297|ref|YP_007359318.1| hypothetical protein MYSTI_02318 [Myxococcus stipitatus DSM 14675]
gi|441486939|gb|AGC43634.1| hypothetical protein MYSTI_02318 [Myxococcus stipitatus DSM 14675]
Length = 181
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM-RSTVLDAAGTFSDRPLFFGGPLE--EG 194
F R+VIL++ G G+++NR + +++ E+ R LD S P+F GGP+E G
Sbjct: 20 FYRSVILMIEHGESGSMGLVVNRGAALTLGELARGQKLDIHTDRSSHPVFVGGPVEPQRG 79
Query: 195 LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGW 254
L DE+ + V+ GL+ T+ +++R + RF G GW
Sbjct: 80 FVLHDD----DELLEK---HSVLPGLFLSV--TLDALGPLLERAS---PRLRFCLGYAGW 127
Query: 255 EKEQLNEEIRAGYWTVA-ACSPSVIGLESGTLGLWEELLWLMG 296
QL EI AG W A + +V+G E G LWE L MG
Sbjct: 128 GPRQLESEIAAGSWLFTEATAEAVLGQEPGK--LWETTLRGMG 168
>gi|416076727|ref|ZP_11585653.1| YqgE like protein [Aggregatibacter actinomycetemcomitans serotype b
str. SCC1398]
gi|444338387|ref|ZP_21152230.1| YqgE like protein [Aggregatibacter actinomycetemcomitans serotype b
str. SCC4092]
gi|444347683|ref|ZP_21155517.1| YqgE like protein [Aggregatibacter actinomycetemcomitans serotype b
str. S23A]
gi|348004474|gb|EGY44977.1| YqgE like protein [Aggregatibacter actinomycetemcomitans serotype b
str. SCC1398]
gi|443545156|gb|ELT55005.1| YqgE like protein [Aggregatibacter actinomycetemcomitans serotype b
str. SCC4092]
gi|443548375|gb|ELT57641.1| YqgE like protein [Aggregatibacter actinomycetemcomitans serotype b
str. S23A]
Length = 186
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM---RSTVLDAAGTFS 181
LLIA LD + F RTVI I G G++LN+P+ +SI E+ + ++ T++
Sbjct: 8 LLIAMPNLDDSY-FYRTVIYICEHNEKGSMGLVLNQPTDLSIAELGAKMNFMMVTHRTYN 66
Query: 182 DRPLFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
D+ + GGP ++ G L + K D + V + +M +T G E
Sbjct: 67 DKLVLAGGPVNIDRGFILHTNTKVPFDHSYR--VSDNLMLTTSADVVDTFGTMLE----- 119
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE + GC WE QL +EI W V + ++
Sbjct: 120 ---PEKYLVTLGCASWEANQLEQEIMNNSWLVVPATEQIL 156
>gi|88803468|ref|ZP_01118994.1| putative transcriptional regulator [Polaribacter irgensii 23-P]
gi|88781034|gb|EAR12213.1| putative transcriptional regulator [Polaribacter irgensii 23-P]
Length = 185
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 20/186 (10%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P+KG LL+A + F + ++L+ G ILN+P ++ ++ + +
Sbjct: 6 PKKGRLLVAEPSILNDTSFNKAIVLLTEHTANNSVGFILNKPLAYNLNDLLPNI---KCS 62
Query: 180 FSDRPLFFGGPLEE-GLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
F ++ GGP+E+ L+ + P+ + V G+Y+G E++
Sbjct: 63 FK---IYQGGPVEQDNLYFLHRVPQLLSKSIA-------VSNGVYWGG--DFNQLTELLN 110
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELLWLM 295
+ + + RFF G GW+KEQL E++ W V I L + LW E+LL
Sbjct: 111 NSVLDTSEIRFFLGYSGWDKEQLGAELKEKSWFVTENDFENI-LSNDEKNLWKEKLLQKG 169
Query: 296 GRRKVW 301
G K+W
Sbjct: 170 GAYKIW 175
>gi|365967151|ref|YP_004948713.1| YqgE like protein [Aggregatibacter actinomycetemcomitans ANH9381]
gi|416090388|ref|ZP_11588088.1| YqgE like protein [Aggregatibacter actinomycetemcomitans serotype b
str. I23C]
gi|348009202|gb|EGY49377.1| YqgE like protein [Aggregatibacter actinomycetemcomitans serotype b
str. I23C]
gi|365746064|gb|AEW76969.1| YqgE like protein [Aggregatibacter actinomycetemcomitans ANH9381]
Length = 185
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM---RSTVLDAAGTFS 181
LLIA LD + F RTVI I G G++LN+P+ +SI E+ + ++ T++
Sbjct: 7 LLIAMPNLDDSY-FYRTVIYICEHNEKGSMGLVLNQPTDLSIAELGAKMNFMMVTHRTYN 65
Query: 182 DRPLFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
D+ + GGP ++ G L + K D + V + +M +T G E
Sbjct: 66 DKLVLAGGPVNIDRGFILHTNTKVPFDHSYR--VSDNLMLTTSADVVDTFGTMLE----- 118
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE + GC WE QL +EI W V + ++
Sbjct: 119 ---PEKYLVTLGCASWEANQLEQEIMNNSWLVVPATEQIL 155
>gi|261867347|ref|YP_003255269.1| hypothetical protein D11S_0648 [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|416103963|ref|ZP_11589631.1| YqgE like protein [Aggregatibacter actinomycetemcomitans serotype c
str. SCC2302]
gi|261412679|gb|ACX82050.1| hypothetical protein D11S_0648 [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|348007645|gb|EGY47945.1| YqgE like protein [Aggregatibacter actinomycetemcomitans serotype c
str. SCC2302]
Length = 185
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM---RSTVLDAAGTFS 181
LLIA LD + F RTVI I G G++LN+P+ +SI E+ + ++ T++
Sbjct: 7 LLIAMPNLDDSY-FYRTVIYICEHNEKGSMGLVLNQPTDLSIAELGAKMNFMMVTHRTYN 65
Query: 182 DRPLFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
D+ + GGP ++ G L + K D + V + +M +T G E
Sbjct: 66 DKLVLAGGPVNIDRGFILHTNTKVPFDHSYR--VSDNLMLTTSADVVDTFGTMLE----- 118
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE + GC WE QL +EI W V + ++
Sbjct: 119 ---PEKYLVTLGCASWEANQLEQEIMNNSWLVVPAAEQIL 155
>gi|415768605|ref|ZP_11483844.1| hypothetical protein D17P2_0830 [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|444345608|ref|ZP_21153619.1| YqgE like protein [Aggregatibacter actinomycetemcomitans serotype c
str. AAS4A]
gi|348657816|gb|EGY75397.1| hypothetical protein D17P2_0830 [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|443542669|gb|ELT52977.1| YqgE like protein [Aggregatibacter actinomycetemcomitans serotype c
str. AAS4A]
Length = 186
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM---RSTVLDAAGTFS 181
LLIA LD + F RTVI I G G++LN+P+ +SI E+ + ++ T++
Sbjct: 8 LLIAMPNLDDSY-FYRTVIYICEHNEKGSMGLVLNQPTDLSIAELGAKMNFMMVTHRTYN 66
Query: 182 DRPLFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
D+ + GGP ++ G L + K D + V + +M +T G E
Sbjct: 67 DKLVLAGGPVNIDRGFILHTNTKVPFDHSYR--VSDNLMLTTSADVVDTFGTMLE----- 119
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE + GC WE QL +EI W V + ++
Sbjct: 120 ---PEKYLVTLGCASWEANQLEQEIMNNSWLVVPAAEQIL 156
>gi|423225172|ref|ZP_17211639.1| hypothetical protein HMPREF1062_03825 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392633628|gb|EIY27570.1| hypothetical protein HMPREF1062_03825 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 197
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 25/189 (13%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P +G +LI+ E +F R++IL++ G G++LN+ S+ + VL
Sbjct: 17 PSRGKVLIS-EPFLYDEMFGRSIILLVDHTLDGTMGLVLNK----SLPLYLNDVLKDFKD 71
Query: 180 FSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
+ P++ GGPL + +L + KG D + Q+ +G Y + + ++R
Sbjct: 72 VENIPIYKGGPLCTDTLFYLHTLKGVEDSL-------QIGKGFY------LNGDFDAIRR 118
Query: 238 NAVGPEDF----RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLW 293
+ D RFF G GWE +QL +EI W + + + + + E G+ LW+ +L
Sbjct: 119 YILEGNDITGKIRFFLGYSGWEHDQLCQEIEENTWLIGSTNIASLMDEKGSAELWKNVLG 178
Query: 294 -LMGRRKVW 301
L G+ + W
Sbjct: 179 ELGGKYETW 187
>gi|325107326|ref|YP_004268394.1| hypothetical protein Plabr_0747 [Planctomyces brasiliensis DSM
5305]
gi|324967594|gb|ADY58372.1| UPF0301 protein yqgE [Planctomyces brasiliensis DSM 5305]
Length = 189
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 23/184 (12%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+++ +G L+AT +L + F R V+L+L G G+I+NRPS +++ + D
Sbjct: 1 MYDSLRGQFLLATRQLRDTNFF-RAVVLLLEHNEEGAMGLIINRPSSVNVSHALAGHFDV 59
Query: 177 AGTFSDRPLFFGGPLEEGLFLV---SPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
S ++ GGP+E + +P G E+ V+ +Y G+ A E
Sbjct: 60 --PCSSDVIYVGGPVEPSALSMLHGNPSWGDREL-------SVIPDVYVGSSAE---AFE 107
Query: 234 MVKRNAVGPED----FRFFDGCCGWEKEQLNEEIRAGYW-TVAACSPSVIGLESGTLGLW 288
+ N D +R F G GW + QL EI G W T+ A +P V +W
Sbjct: 108 AMVLNGGSESDVDANYRIFSGYAGWGEGQLEGEIARGDWFTLEATAPFV--FHQRPYDVW 165
Query: 289 EELL 292
++LL
Sbjct: 166 DQLL 169
>gi|145297077|ref|YP_001139898.1| hypothetical protein cgR_2973 [Corynebacterium glutamicum R]
gi|417970216|ref|ZP_12611150.1| hypothetical protein CgS9114_04255 [Corynebacterium glutamicum
S9114]
gi|140846997|dbj|BAF55996.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344045515|gb|EGV41186.1| hypothetical protein CgS9114_04255 [Corynebacterium glutamicum
S9114]
Length = 201
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
+E G LL+A + FER+++LI+ P G+ ++ S +++ + +D
Sbjct: 16 NEVAPGMLLVAAPDM-ASEDFERSIVLIIEHSPATTFGVNISSRSDVAVANVLPEWVDL- 73
Query: 178 GTFSDRPLFFGGPLEE----GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
T + L+ GGPL + GL + P G ++ S F ++ L + A E
Sbjct: 74 -TSKPQALYIGGPLSQQAVVGLGVTKP---GVDIDNSTSFNKLANRL---VHVDLRSAPE 126
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
V + G RFF G W QLNEEI G W V PS I + G + +W +++
Sbjct: 127 DVADDLEG---MRFFAGYAEWAPGQLNEEIEQGDWFVTPALPSDI-IAPGRVDIWGDVM 181
>gi|296121687|ref|YP_003629465.1| hypothetical protein Plim_1432 [Planctomyces limnophilus DSM 3776]
gi|296014027|gb|ADG67266.1| protein of unknown function DUF179 [Planctomyces limnophilus DSM
3776]
Length = 188
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 85/176 (48%), Gaps = 18/176 (10%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
+G LL+A+++L + F +TV+LI+ G G++LNRPS + + S S
Sbjct: 6 RGKLLVASKQLKDSN-FYKTVVLIVEDNENGSMGLVLNRPSSILVNHALSEHFQLPE--S 62
Query: 182 DRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
+ GGP+E LF++ +E+ G V+ G++ G G A E V R++
Sbjct: 63 AELVHVGGPVEPAALFILH---NLEELSHEGT--GVIPGVWLGNS---GEAFEDVLRSS- 113
Query: 241 GPED----FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
P FR F GC GW QL E+ G W VA S++ E ++E++L
Sbjct: 114 DPHQPGVRFRVFCGCAGWSPGQLEGELAHGDWHVAPAIKSIVFAED-PYEIYEQML 168
>gi|91776451|ref|YP_546207.1| hypothetical protein Mfla_2099 [Methylobacillus flagellatus KT]
gi|119372122|sp|Q1GZH1.1|Y2099_METFK RecName: Full=UPF0301 protein Mfla_2099
gi|91710438|gb|ABE50366.1| protein of unknown function DUF179 [Methylobacillus flagellatus KT]
Length = 189
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM-RSTVLDAAGTFSDRPLFFGGP--LEEG 194
F ++V I G GI++NRP M+++++ + L AG +D+P++FGGP L+ G
Sbjct: 22 FAKSVTFICEHNADGAMGIVINRPINMTLQDLFKQLNLPLAGALTDKPIYFGGPVQLDRG 81
Query: 195 LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGW 254
L P D + + E++ GL +K+ + AE GP F G GW
Sbjct: 82 FVLHQPLQEWDSTLR--IDEEI--GLT-TSKDILQAIAE-----GHGPHHFLISLGYAGW 131
Query: 255 EKEQLNEEIRAGYWTVAACSP 275
QL +E+ W +P
Sbjct: 132 SSGQLEQELAHNAWLTVEATP 152
>gi|307249445|ref|ZP_07531434.1| hypothetical protein appser4_2540 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306858519|gb|EFM90586.1| hypothetical protein appser4_2540 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 186
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 15/183 (8%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE----MRSTVL 174
E +G LIAT ++D + F+RTVI I G G+++N P+ +S+ E M +
Sbjct: 3 ENLQGKFLIATPEIDDDY-FDRTVIYICEHNSNGAMGLVINTPTDLSVLELITRMDFQMA 61
Query: 175 DAAGTFSDRPLFFGGPLEEGL-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
+ D+ + GG + + F++ K + + V + ++ +++G
Sbjct: 62 NQRNYHKDQMVLSGGSVSQDRGFIIHTKTEQEFLHSYRVTDNILLTTSGDVLDSLG---- 117
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLW 293
PE F GC W+ EQL +EI YW ++ + + E+G L W E
Sbjct: 118 ----KPEAPEKFIVCLGCATWKPEQLEQEIARNYWLISEANDKTL-FETGYLERWVEANE 172
Query: 294 LMG 296
++G
Sbjct: 173 MLG 175
>gi|255022231|ref|ZP_05294226.1| hypothetical protein ACA_1915 [Acidithiobacillus caldus ATCC 51756]
gi|340781013|ref|YP_004747620.1| hypothetical protein Atc_0269 [Acidithiobacillus caldus SM-1]
gi|254968322|gb|EET25889.1| hypothetical protein ACA_1915 [Acidithiobacillus caldus ATCC 51756]
gi|340555166|gb|AEK56920.1| conserved hypothetical protein [Acidithiobacillus caldus SM-1]
Length = 185
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 122 KGCLLIATEKL-DGVHIFERTVILILSMEPMGPSGIILNRPSLMSI-KEMRSTVLDAAGT 179
K LLIA L DG +F+R+VI+I P G G+++NR +S+ K + + +
Sbjct: 7 KNHLLIAMPNLHDG--MFDRSVIVICEHSPEGAMGLVINRLLDISLAKALEAVNITPPED 64
Query: 180 FSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+ +P+F+GGP++ + +G GD V V EGL+ + + M
Sbjct: 65 AAQKPVFWGGPVQPQHGFILHEGAGDWQ----VSMAVGEGLFLTSSPDI----LMAIAEH 116
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GPE F G GW + QL +E+ W SV+
Sbjct: 117 RGPERFLLALGYAGWGEGQLEQELSENSWLHGPIDLSVL 155
>gi|384085787|ref|ZP_09996962.1| hypothetical protein AthiA1_09805 [Acidithiobacillus thiooxidans
ATCC 19377]
Length = 186
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 20/153 (13%)
Query: 122 KGCLLIATEKL-DGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE-MRSTVLDAAGT 179
K LLIA L DG IF+RTVI++ P G G+++NR +++ E +++ + +
Sbjct: 8 KNHLLIAMPALHDG--IFDRTVIVVCEHSPDGAMGVVINRLVDINMSEALKAVDIQPSEE 65
Query: 180 FSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
RP+++GGP+ + G L SPKG + + L + + ++++
Sbjct: 66 MIHRPVYWGGPVQPQHGFILHSPKG------------EWLSSLELNEDLALTSSPDILQA 113
Query: 238 NAVGPEDFRFF--DGCCGWEKEQLNEEIRAGYW 268
A E R+ G GW +QL EE++ W
Sbjct: 114 IAQHEEPQRYLLALGYAGWGAQQLEEELKENSW 146
>gi|374597501|ref|ZP_09670505.1| protein of unknown function DUF179 [Gillisia limnaea DSM 15749]
gi|373872140|gb|EHQ04138.1| protein of unknown function DUF179 [Gillisia limnaea DSM 15749]
Length = 186
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 86/187 (45%), Gaps = 19/187 (10%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P KG LL+A + G F R+VIL+ G G ILN+ ++ ++ +
Sbjct: 5 KPSKGLLLVAEPSIIGDASFNRSVILLAEHSESGSIGFILNKVLDFTLNDLIPELDKGFK 64
Query: 179 TFSDRPLFFGGPLEE-GLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
++ GGP+E+ L+ + P+ + + ++ G+Y+G V E++
Sbjct: 65 VYN------GGPVEQDNLYFIHKVPELIPESI-------EIANGIYWGGNFEV--VKELI 109
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELLWL 294
+ + + RFF G GW+ +QL +E+ W +++ + +E W ++++ L
Sbjct: 110 LNDLITEKQIRFFLGYSGWDAQQLKDELDTNAWIISSHQDAKDIIERPYRSFWKDKMIEL 169
Query: 295 MGRRKVW 301
G +W
Sbjct: 170 GGDYMLW 176
>gi|326800735|ref|YP_004318554.1| hypothetical protein [Sphingobacterium sp. 21]
gi|326551499|gb|ADZ79884.1| protein of unknown function DUF179 [Sphingobacterium sp. 21]
Length = 188
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 90/180 (50%), Gaps = 13/180 (7%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSM-EPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
P++G LL++ + + F+R+V+L+ + G G++LN+PS + +K++ S + +A
Sbjct: 7 PQQGSLLLSEPFMLDPN-FQRSVVLLCEHSDEDGSVGLVLNQPSSLLLKDVMSDMPNA-- 63
Query: 179 TFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
+ LF GGP+ + K D + SG+ ++ E L++G ++
Sbjct: 64 ---EYQLFVGGPVGQDSIQFIHKCY-DRL-NSGI--EIKENLFWGG--NFEALKLLINDR 114
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRR 298
A+G ++ +FF G GW QLN+E++ W + I + LW+E + +G R
Sbjct: 115 AIGLDEIKFFIGYSGWSGGQLNKELKENTWMIGNSFDPDIVFVNDEENLWKEAVISLGPR 174
>gi|153806690|ref|ZP_01959358.1| hypothetical protein BACCAC_00961 [Bacteroides caccae ATCC 43185]
gi|149131367|gb|EDM22573.1| putative ACR, COG1678 [Bacteroides caccae ATCC 43185]
Length = 196
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 33/189 (17%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR--PSLMSIKEMRSTVLDAA 177
P +G +LI+ L V F R+VIL++ G G+++N+ P L++ M +D
Sbjct: 17 PSRGKILISEPFLRDV-TFGRSVILLIDHTEEGSMGLVINKQLPLLLNDIIMEFKYIDEI 75
Query: 178 GTFSDRPLFFGGPL-EEGLFLVSPKG---GGDEVGK----SGVFEQVMEGLYFGTKETVG 229
PL+ GGP+ + LF + G + K +G FE++ + G K +
Sbjct: 76 ------PLYKGGPIATDTLFYLHTLADIPGAISICKGLYLNGDFEEIKRYILQGNKIS-- 127
Query: 230 CAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWE 289
E RFF G GWE EQL+ EIR W V+ S + ++S T +W
Sbjct: 128 -------------EHIRFFLGYSGWESEQLSNEIRENTWLVSEEKKSYL-MKSDTKDMWR 173
Query: 290 ELLWLMGRR 298
+ L +G +
Sbjct: 174 KALEKLGSK 182
>gi|329955108|ref|ZP_08296089.1| uncharacterized ACR protein [Bacteroides clarus YIT 12056]
gi|328526398|gb|EGF53413.1| uncharacterized ACR protein [Bacteroides clarus YIT 12056]
Length = 197
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 17/185 (9%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P +G +LI +E H+F R+VIL++ G G+++N+P + + ++ S +
Sbjct: 17 PARGKVLI-SEPFLCDHMFGRSVILLVDHTQDGTMGLVMNKPLPLFLNDLLSEI----DC 71
Query: 180 FSDRPLFFGGPLEEG--LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
D P++ GGP+ +L + + D + + G Y + M +
Sbjct: 72 REDIPIYKGGPISTDTLFYLHTLENIADSL-------PIANGFYL-NGDFAAIKQFMAEG 123
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLW-LMG 296
N++ + RFF G GWE QL +EI W V + E + LW++ L L G
Sbjct: 124 NSIKGK-IRFFLGYSGWESGQLKQEIEENTWLVDKADIPSLMDEKASKNLWKDALGKLGG 182
Query: 297 RRKVW 301
+ ++W
Sbjct: 183 KYEMW 187
>gi|359773089|ref|ZP_09276498.1| hypothetical protein GOEFS_079_00040 [Gordonia effusa NBRC 100432]
gi|359309762|dbj|GAB19276.1| hypothetical protein GOEFS_079_00040 [Gordonia effusa NBRC 100432]
Length = 197
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 85/194 (43%), Gaps = 17/194 (8%)
Query: 110 GDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM 169
GD++ + G LLIA+ L IF R+VI ++ G G+ILN+ S ++ +
Sbjct: 4 GDEFVASQRRVRAGTLLIASTTLTE-SIFARSVIYLIEHNDEGSLGVILNQMSQTAVHNL 62
Query: 170 RSTVLDAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYF--GTKET 227
D A S R LF GGP+++ L V K G+ +EG+ G
Sbjct: 63 LPRWTDLAA--SPRALFIGGPVKQDSALCL------GVLKPGIDSGPIEGIRHVDGRVVL 114
Query: 228 VGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGL 287
V A+ + + E R F G GW QL+ E+ W VA+ P + T+ +
Sbjct: 115 VDLDADPEQLAEI-LEAVRLFAGYSGWSSGQLDSELGQDSWLVASGLPRDV-TAPATVDV 172
Query: 288 WEELLWLMGRRKVW 301
W +L RR+ W
Sbjct: 173 WSSVL----RRQPW 182
>gi|257057894|ref|YP_003135726.1| hypothetical protein Svir_39570 [Saccharomonospora viridis DSM
43017]
gi|256587766|gb|ACU98899.1| predicted transcriptional regulator [Saccharomonospora viridis DSM
43017]
Length = 198
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 76/179 (42%), Gaps = 23/179 (12%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
E G LL+A + + F RTV+ ++ G G++LNRPS ++++E+ D
Sbjct: 16 EPGTLLVAAPTMFDPN-FRRTVVFVIDHRAEGTLGVVLNRPSEVAVREVLPRWGDHVA-- 72
Query: 181 SDRPLFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCA-----AE 233
R +F GGP+E+ L L + + G GV G + V E
Sbjct: 73 EPRSVFVGGPVEKKTALCLAALRTGETAATVPGV---------IGVRGPVALVDLDSDPE 123
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
M+ G R F G GW+ QL EI G W + PS + + T LW +L
Sbjct: 124 MLASKVRG---LRVFAGYAGWDGGQLASEIERGDWLIVPALPSDV-MAGPTRDLWGHVL 178
>gi|359765318|ref|ZP_09269149.1| hypothetical protein GOPIP_019_00170 [Gordonia polyisoprenivorans
NBRC 16320]
gi|378720473|ref|YP_005285362.1| hypothetical protein GPOL_c50020 [Gordonia polyisoprenivorans VH2]
gi|359317252|dbj|GAB21982.1| hypothetical protein GOPIP_019_00170 [Gordonia polyisoprenivorans
NBRC 16320]
gi|375755176|gb|AFA75996.1| hypothetical protein GPOL_c50020 [Gordonia polyisoprenivorans VH2]
Length = 225
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 82/187 (43%), Gaps = 29/187 (15%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+A+ L F RTVI ++ G G++LNR S ++ + + D A
Sbjct: 45 GTLLLASTDL-LEPTFARTVIYVIEHNDAGSLGVVLNRVSQTAVHNVMPSWTDLAA--QP 101
Query: 183 RPLFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA- 239
R LF GGP+++ L L + G D G EQ+ V ++ +A
Sbjct: 102 RALFVGGPVKQDSALCLGVVRHGADISG----IEQI---------RPVSGRVALIDLDAD 148
Query: 240 ---VGP--EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWL 294
+GP E R F G GW QL+ E+ W +A+ P I L T +W ++L
Sbjct: 149 PELIGPVLEGLRIFAGYAGWGIGQLDAEMAQDSWMLASALPRDI-LAPSTTDIWADVL-- 205
Query: 295 MGRRKVW 301
RR+ W
Sbjct: 206 --RRQPW 210
>gi|94676866|ref|YP_588918.1| hypothetical protein BCI_0481 [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|118574363|sp|Q1LSZ6.1|Y481_BAUCH RecName: Full=UPF0301 protein BCI_0481
gi|94220016|gb|ABF14175.1| conserved hypothetical protein [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 187
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 20/151 (13%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP----SLMSI--KEMRSTVLDAAGTFSDRPLFFGGP 190
+F+++V+ I + G GI++N+P ++ S+ K ++D A ++P+F GGP
Sbjct: 18 LFKQSVVYICTHNHEGAMGIVINKPVEQFTVASVLHKLKIIPIVDHASVQLNQPVFLGGP 77
Query: 191 L--EEGLFLVSPKGG-GDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRF 247
L + G + +PK G G +G S Q M ET+G + P+D
Sbjct: 78 LADDRGFIIHTPKDGFGASIGIS---PQTMITTSKDVLETLGTHNQ--------PDDILV 126
Query: 248 FDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GWE+ QL E+RA W + ++
Sbjct: 127 ALGYSGWEEGQLEHELRANTWLTIPANNQIL 157
>gi|256424605|ref|YP_003125258.1| hypothetical protein Cpin_5633 [Chitinophaga pinensis DSM 2588]
gi|256039513|gb|ACU63057.1| protein of unknown function DUF179 [Chitinophaga pinensis DSM 2588]
Length = 146
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 21/157 (13%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
K + I + L +FE TVI I G G I+N + E L+
Sbjct: 2 KAGIFINSTSLLEKSVFESTVIYITEYNENGAMGFIVNNRFPRKLNE-----LEEFSHGR 56
Query: 182 DRPLFFGGPLE-EGLFLVSPK----GGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
D PL+ GGP++ E LF + + GG++VG + ++ G A + +
Sbjct: 57 DFPLWEGGPVDKEHLFFIHQRPDLISGGEQVG---------DNIFLGGD--FQAAVKHIN 105
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAAC 273
+ + +D + F G CGW+ ++L+EEI G W +
Sbjct: 106 EHTLTEQDIKIFIGYCGWDYKELDEEIDEGSWRITQT 142
>gi|19554273|ref|NP_602275.1| hypothetical protein NCgl2978 [Corynebacterium glutamicum ATCC
13032]
gi|62391930|ref|YP_227332.1| hypothetical protein cg3414 [Corynebacterium glutamicum ATCC 13032]
gi|418244922|ref|ZP_12871334.1| hypothetical protein KIQ_05438 [Corynebacterium glutamicum ATCC
14067]
gi|41223077|emb|CAF19022.1| Putative transcriptional regulator [Corynebacterium glutamicum ATCC
13032]
gi|354510937|gb|EHE83854.1| hypothetical protein KIQ_05438 [Corynebacterium glutamicum ATCC
14067]
gi|385145159|emb|CCH26198.1| hypothetical protein WA5_2978 [Corynebacterium glutamicum K051]
Length = 201
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
+E G LL+A + FER+++LI+ P G+ ++ S +++ + +D
Sbjct: 16 NEVAPGMLLVAAPDM-ASEDFERSIVLIIEHSPATTFGVNISSRSDVAVANVLPEWVDL- 73
Query: 178 GTFSDRPLFFGGPLEE----GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
T + L+ GGPL + GL + P G ++ S F ++ L + A E
Sbjct: 74 -TSKPQALYIGGPLSQQAVVGLGVTKP---GVDIENSTSFNKLANRL---VHVDLRSAPE 126
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
V + G RFF G W QLNEEI G W V PS I + G + +W +++
Sbjct: 127 DVADDLEG---MRFFAGYAEWAPGQLNEEIEQGDWFVTPALPSDI-IAPGRVDIWGDVM 181
>gi|373956937|ref|ZP_09616897.1| protein of unknown function DUF179 [Mucilaginibacter paludis DSM
18603]
gi|373893537|gb|EHQ29434.1| protein of unknown function DUF179 [Mucilaginibacter paludis DSM
18603]
Length = 187
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 12/179 (6%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P G LLI+ + + F+R+VILI G G +LN S M + ++ +
Sbjct: 7 PATGRLLISEPFMMDPN-FKRSVILITEYSDAGAMGFVLNHASDMLLGDIIPEI-----A 60
Query: 180 FSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+S+ PLF GGP+ + E + G+ ++ +G+Y+G E+
Sbjct: 61 YSELPLFKGGPVGANTLHFIHRC--PEKIEGGI--EIWDGVYWGGD--FEMVKELANTYQ 114
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRR 298
+ + RFF G GW + QL+ E+ W VA I LW+E++ +G R
Sbjct: 115 LNDTEIRFFIGYSGWSEGQLDAELMDDTWIVANKFNPDIFFNHNEESLWKEVVISLGHR 173
>gi|423218183|ref|ZP_17204679.1| UPF0301 protein [Bacteroides caccae CL03T12C61]
gi|392627686|gb|EIY21721.1| UPF0301 protein [Bacteroides caccae CL03T12C61]
Length = 207
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 33/189 (17%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR--PSLMSIKEMRSTVLDAA 177
P +G +LI+ L V F R+VIL++ G G+++N+ P L++ M +D
Sbjct: 28 PSRGKILISEPFLRDV-TFGRSVILLIDHTEEGSMGLVINKQLPLLLNDIIMEFKYIDEI 86
Query: 178 GTFSDRPLFFGGPL-EEGLFLVSPKG---GGDEVGK----SGVFEQVMEGLYFGTKETVG 229
PL+ GGP+ + LF + G + K +G FE++ + G K +
Sbjct: 87 ------PLYKGGPIATDTLFYLHTLADIPGAISICKGLYLNGDFEEIKRYILQGNKIS-- 138
Query: 230 CAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWE 289
E RFF G GWE EQL+ EIR W V+ S + ++S T +W
Sbjct: 139 -------------EHIRFFLGYSGWESEQLSNEIRENTWLVSEEKKSYL-MKSDTKDMWR 184
Query: 290 ELLWLMGRR 298
+ L +G +
Sbjct: 185 KALEKLGSK 193
>gi|114564014|ref|YP_751528.1| hypothetical protein Sfri_2850 [Shewanella frigidimarina NCIMB 400]
gi|122299095|sp|Q07Z75.1|Y2850_SHEFN RecName: Full=UPF0301 protein Sfri_2850
gi|114335307|gb|ABI72689.1| protein of unknown function DUF179 [Shewanella frigidimarina NCIMB
400]
Length = 186
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAG 178
K LIA LD FER+VI I + G G+++NRP + ++++ + L
Sbjct: 5 KDHFLIAMPSLDDT-FFERSVIYICEHDQKGAMGLMVNRPIGVEVEDLLEQMELYLSPEF 63
Query: 179 TFS-DRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
FS D + GGP+ E G L +P+ V + + E M ++G
Sbjct: 64 VFSLDSQVLIGGPVAPERGFVLHTPQQHW--VNSTEISEDTMLTSSRDILASIGSDK--- 118
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLM 295
PE+F G GW K+QL +EI W +P ++ + E +WLM
Sbjct: 119 -----SPENFVVALGYSGWSKDQLEQEIADNTWLTIKATPELL------FNVEPEQMWLM 167
Query: 296 GRRKV 300
+++
Sbjct: 168 ATQQL 172
>gi|441510855|ref|ZP_20992755.1| hypothetical protein GOACH_29_00030 [Gordonia aichiensis NBRC
108223]
gi|441445003|dbj|GAC50716.1| hypothetical protein GOACH_29_00030 [Gordonia aichiensis NBRC
108223]
Length = 221
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 94 SVDPDAAVNYPPQNSLGDKWAHTI---------HEPEKGCLLIATEKLDGVHIFERTVIL 144
+V D+A ++ P+NS G + I + G LL+A+ L F R+VI
Sbjct: 3 TVGGDSADDFSPENSDGTEGGSGIPGARDMESANSVRPGTLLLASTDLTE-PTFARSVIY 61
Query: 145 ILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEGLFLVSPKGGG 204
++ G G+ILNR S ++ + D A S + LF GGP+++ L
Sbjct: 62 VIEHNDGGSLGVILNRMSQTAVHNILPQWTDLAA--SPQALFIGGPVKQDAALCL----- 114
Query: 205 DEVGKSGVFEQVMEGLYFGTKETVGC---AAEMVKRNAVGPEDFRFFDGCCGWEKEQLNE 261
V K GV + EGL V A E + + E R F G GW QL+
Sbjct: 115 -GVAKHGVEIEAFEGLRPVDGRVVLVDLDADEELLAEVL--EGVRIFAGYAGWGIGQLDA 171
Query: 262 EIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRRKVW 301
E+ W +A+ P + L T+ +W ++L RR+ W
Sbjct: 172 ELAQDSWLLASALPRDL-LAPPTVDVWADVL----RRQPW 206
>gi|46577505|sp|Q8NL65.1|Y3084_CORGL RecName: Full=UPF0301 protein Cgl3084/cg3414
gi|21325857|dbj|BAC00478.1| Putative transcriptional regulator [Corynebacterium glutamicum ATCC
13032]
Length = 189
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
+E G LL+A + FER+++LI+ P G+ ++ S +++ + +D
Sbjct: 4 NEVAPGMLLVAAPDM-ASEDFERSIVLIIEHSPATTFGVNISSRSDVAVANVLPEWVDL- 61
Query: 178 GTFSDRPLFFGGPLEE----GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
T + L+ GGPL + GL + P G ++ S F ++ L + A E
Sbjct: 62 -TSKPQALYIGGPLSQQAVVGLGVTKP---GVDIENSTSFNKLANRL---VHVDLRSAPE 114
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
V + G RFF G W QLNEEI G W V PS I + G + +W +++
Sbjct: 115 DVADDLEG---MRFFAGYAEWAPGQLNEEIEQGDWFVTPALPSDI-IAPGRVDIWGDVM 169
>gi|413933988|gb|AFW68539.1| hypothetical protein ZEAMMB73_014702 [Zea mays]
Length = 1195
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 18/155 (11%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPM-GPSGIILN-RPSLMSIKEMRSTVLDAAGTF 180
G +L AT+KL F+ +LI+S + G G+I+N R S K++ S++
Sbjct: 1041 GSILTATKKLGTAVPFDNAKVLIVSADSHEGFHGLIINKRLSWGVFKDLDSSM----EPI 1096
Query: 181 SDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
PLF+GGP+ +G LVS V G + QV+ G+Y+G + + +V R
Sbjct: 1097 KHAPLFYGGPVVVQGYHLVSLS----RVSSEG-YMQVIPGVYYG---NIVATSRVVTRIK 1148
Query: 240 VGPEDFR---FFDGCCGWEKEQLNEEIRAGYWTVA 271
+G + FF G GW QL +E+ G W V+
Sbjct: 1149 LGEQSVNGLWFFLGYSGWGYNQLFDELTEGAWLVS 1183
>gi|377564858|ref|ZP_09794169.1| hypothetical protein GOSPT_062_00690 [Gordonia sputi NBRC 100414]
gi|377528012|dbj|GAB39334.1| hypothetical protein GOSPT_062_00690 [Gordonia sputi NBRC 100414]
Length = 221
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 27/219 (12%)
Query: 94 SVDPDAAVNYPPQNSLGDKWA--------HTIHEPEKGCLLIATEKLDGVHIFERTVILI 145
+V D+A ++ P+NS G + + + G LL+A+ L F R+VI I
Sbjct: 4 TVGGDSADDFSPENSDGAEGGGMPGARDMESANSVRAGTLLLASTDLT-EPTFARSVIYI 62
Query: 146 LSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEGLFLVSPKGGGD 205
+ G G+ILNR S ++ + D A S + LF GGP+++ L
Sbjct: 63 IEHNDGGSLGVILNRMSQTAVHNILPQWTDLAA--SPQALFIGGPVKQDAALCL------ 114
Query: 206 EVGKSGVFEQVMEGLYFGTKETVGC---AAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEE 262
V K GV + EGL V A + N + E R F G GW QL+ E
Sbjct: 115 GVAKHGVDIEAFEGLRPVDGRVVLVDLDADHELLANVL--EGVRIFAGYAGWGIGQLDAE 172
Query: 263 IRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRRKVW 301
+ W +A+ P + L T+ +W ++ RR+ W
Sbjct: 173 LAQDSWLLASALPRDL-LAPPTVDVWADVF----RRQPW 206
>gi|387773144|ref|ZP_10128739.1| hypothetical protein HMPREF1050_0731 [Haemophilus parahaemolyticus
HK385]
gi|386905184|gb|EIJ69955.1| hypothetical protein HMPREF1050_0731 [Haemophilus parahaemolyticus
HK385]
Length = 187
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 15/180 (8%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE----MRSTVLDAA 177
+G LIAT +D + F+R V+ I G G+I+N P+ +S+ E M + +
Sbjct: 6 QGKFLIATPDMDDPY-FDRAVVYICEHNNNGAMGLIINMPTDLSVLELLTRMDFQMANQR 64
Query: 178 GTFSDRPLFFGGPLEEGL-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
D+ + GGP+ + F+V K + + + +M +T+G
Sbjct: 65 DYKKDQMVLSGGPVSQDRGFIVHTKTAQSFLHSYKITDDIMLTTSGDVLDTLGTTD---- 120
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
PE F GC W EQL +EI W + + + ++G L W E +MG
Sbjct: 121 ----APEHFIICLGCSTWNSEQLQQEIAQNMWIYSESNNKTL-FKTGYLDRWLEANEMMG 175
>gi|152994575|ref|YP_001339410.1| hypothetical protein Mmwyl1_0539 [Marinomonas sp. MWYL1]
gi|189040241|sp|A6VSP6.1|Y539_MARMS RecName: Full=UPF0301 protein Mmwyl1_0539
gi|150835499|gb|ABR69475.1| protein of unknown function DUF179 [Marinomonas sp. MWYL1]
Length = 188
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 67/168 (39%), Gaps = 29/168 (17%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRST--VLDAAGT 179
K LI+ LD H FE TVI + G GII+NRPS + E+ + +
Sbjct: 9 KNHFLISMPHLDDPH-FEHTVIYLCEHTKAGAMGIIINRPSNVDFTELADHLGIQIHSPR 67
Query: 180 FSDRPLFFGGPLE-EGLFLVSPKGG--------GDEVGKSGVFEQVMEGLYFGTKETVGC 230
S P++ GGP+E E F++ DEV S E +E + G
Sbjct: 68 LSSEPIYTGGPVEAERGFILHTTDKVWSNTLRVTDEVSLSASLE-ALEDIAQGN------ 120
Query: 231 AAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GP+ FR GC GW+ QL EI W V V+
Sbjct: 121 ----------GPDAFRITLGCAGWDAGQLEAEIANNDWLVCEADLDVL 158
>gi|384516708|ref|YP_005711800.1| hypothetical protein CULC809_02182 [Corynebacterium ulcerans 809]
gi|334697909|gb|AEG82706.1| hypothetical protein CULC809_02182 [Corynebacterium ulcerans 809]
Length = 198
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 21/181 (11%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
+EP G LLIA ++ +F R VIL+L + G+ L S +++ V+
Sbjct: 13 NEPAPGMLLIAAPSMES-SVFARNVILLLEHNEVTTFGVNLASRSDVAV----FNVMPEW 67
Query: 178 GTFSDRP--LFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGT--KETVGCAA 232
+P L+ GGPL ++G+ + G ++ F ++ L + + G AA
Sbjct: 68 APLVSKPQALYIGGPLNQQGVVGLGVTAPGVDIAAHPHFNRLANRLVYVDLRAQPEGIAA 127
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA-ACSPSVIGLESGTLGLWEEL 291
++ R F G WE QLNEEI G W VA A S VI +G++ +W ++
Sbjct: 128 DL--------SGLRLFAGYAEWEPGQLNEEIEKGEWYVAPALSSDVIA--AGSVDVWGDV 177
Query: 292 L 292
+
Sbjct: 178 M 178
>gi|147768689|emb|CAN76058.1| hypothetical protein VITISV_032001 [Vitis vinifera]
Length = 218
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 225 KETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIG--LES 282
E++ A ++VK+ + PEDF FF G GW+ +QL EE+ + Y VAA SP VI L
Sbjct: 139 NESLDEAGKLVKQGVLKPEDFIFFVGYVGWQLDQLREEMGSDYGYVAAYSPYVIDGVLTE 198
Query: 283 GTLGLWEELL 292
+ G+W+E+
Sbjct: 199 SSSGVWDEVF 208
>gi|387130884|ref|YP_006293774.1| hypothetical protein Q7C_1946 [Methylophaga sp. JAM7]
gi|386272173|gb|AFJ03087.1| UPF0301 protein YqgE [Methylophaga sp. JAM7]
Length = 186
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 15/161 (9%)
Query: 122 KGCLLIATEKLDGVH--IFERTVILILSMEPMGPSGIILNRPSLMSIKEMRS--TVLDAA 177
K LLIA + G+H F + V+ + + G G+I+NRPS + + E+ + + +
Sbjct: 7 KNHLLIA---MPGLHDQTFHQAVVYLCEHDAYGAMGLIINRPSKIKLAELLQHLKIDNQS 63
Query: 178 GTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
P+ +GGPL++ LV GG V EQ LY + + K
Sbjct: 64 EQIHHGPVLYGGPLKKEQGLVLHNGGQYWKNTLNVAEQ----LYLTSSSDILADIGTSK- 118
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GPE+ G GW+ QL E+ W +P ++
Sbjct: 119 ---GPENALVSLGYAGWDTGQLESELAENSWLTVPATPEIL 156
>gi|110638173|ref|YP_678382.1| transcriptional regulator [Cytophaga hutchinsonii ATCC 33406]
gi|118574101|sp|Q11U74.1|Y1773_CYTH3 RecName: Full=UPF0301 protein CHU_1773
gi|110280854|gb|ABG59040.1| conserved hypothetical protein; possible transcriptional regulator
[Cytophaga hutchinsonii ATCC 33406]
Length = 182
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 14/176 (7%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
KG +LI+ L G FER+V+L+ G G +LN+ + ++I ++VL+ TF
Sbjct: 4 KGKILISEPYL-GDSTFERSVVLLCEHNDSGAFGFMLNKSTTLTI----NSVLEEQLTF- 57
Query: 182 DRPLFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
++ LF GGP+ ++ LF + + + K V + + LY+G +++ +
Sbjct: 58 EQNLFLGGPVAQDSLFFLLRQDRA--ILKDSV--HIKDDLYWGGD--FEHLKTLIQEGTL 111
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
++ RFF G GW ++QL E+ W +A + + +++ +W+ +L MG
Sbjct: 112 ELDNCRFFLGYSGWGEDQLEYELEKHSWIIADINSEDMFVKNPE-SMWQNVLRSMG 166
>gi|87307973|ref|ZP_01090116.1| hypothetical protein DSM3645_23841 [Blastopirellula marina DSM
3645]
gi|87289587|gb|EAQ81478.1| hypothetical protein DSM3645_23841 [Blastopirellula marina DSM
3645]
Length = 184
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 18/151 (11%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
+G LLIA+ L + F RTV+L++ + G G++L RP+ +++ M + A +
Sbjct: 5 QGQLLIASPHLPDPN-FLRTVVLMVQHDEEGALGLVLTRPTELTMAAMWREI--AGEEIA 61
Query: 182 DRPL-FFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGT-KETVGCAAEMVKRNA 239
D L F GGP++ L + E+ +++ G+YF + KE + ++V+ +
Sbjct: 62 DENLVFLGGPVQGPLMAIHSHAPCQEI-------EILPGVYFSSDKENI---EKLVREDH 111
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270
E R F G GW ++QL E+ AG W +
Sbjct: 112 ---EPKRIFIGYSGWGEQQLEAEMEAGGWLL 139
>gi|399022709|ref|ZP_10724778.1| putative transcriptional regulator [Chryseobacterium sp. CF314]
gi|398084129|gb|EJL74825.1| putative transcriptional regulator [Chryseobacterium sp. CF314]
Length = 182
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 19/153 (12%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRP-SLMSIKEMRSTVLDAAGTF 180
KG +LI+T + G IF R+V+LI+ + G G+ILN+ S MS K +F
Sbjct: 6 KGKILISTPDISG-DIFSRSVVLIIEHDESGAFGLILNKKNSQMSTK---------FKSF 55
Query: 181 SDRPL--FFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
D + + GGP+E KG + ++ ++ + Y E + V
Sbjct: 56 FDFKIEVYDGGPVENDKVFFIVKGKK----VTEIYTEITDEFYL--TEDIENIISSVLSG 109
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
+ D + F G GW QL+ EI+ WTV
Sbjct: 110 ELSINDVKIFSGYSGWSASQLDREIQKKMWTVV 142
>gi|293336153|ref|NP_001170620.1| uncharacterized protein LOC100384665 [Zea mays]
gi|238006408|gb|ACR34239.1| unknown [Zea mays]
Length = 323
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 18/156 (11%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPM-GPSGIILN-RPSLMSIKEMRSTVLDAAGTF 180
G +L AT+KL F+ +LI+S + G G+I+N R S K++ S++
Sbjct: 169 GSILTATKKLGTAVPFDNAKVLIVSADSHEGFHGLIINKRLSWGVFKDLDSSM----EPI 224
Query: 181 SDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
PLF+GGP+ +G LVS V G + QV+ G+Y+G + + +V R
Sbjct: 225 KHAPLFYGGPVVVQGYHLVSL----SRVSSEG-YMQVIPGVYYG---NIVATSRVVTRIK 276
Query: 240 VGPEDFR---FFDGCCGWEKEQLNEEIRAGYWTVAA 272
+G + FF G GW QL +E+ G W V+
Sbjct: 277 LGEQSVNGLWFFLGYSGWGYNQLFDELTEGAWLVSV 312
>gi|410030082|ref|ZP_11279912.1| putative transcriptional regulator [Marinilabilia sp. AK2]
Length = 189
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LLI+ L + F R+V+L+ G G++LN+ S++ +KE+ + + D
Sbjct: 12 GTLLISEPFLQDEN-FVRSVVLLCENNENGSFGLVLNKLSILKLKELIDDI-----SSLD 65
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFE---QVMEGLYFGTKETVGCAAEMVKRNA 239
++ GGP+E+ +G S +FE Q+ E L++G E +K
Sbjct: 66 CDVYVGGPVEQNTLHFIYRG-------SKLFEESIQLGEDLWWGGD--FDGLLERLKLGI 116
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
+ RFF G GW QLN+E+R W V S S LW +L MG
Sbjct: 117 IKENRIRFFIGYSGWGAGQLNDELRDNTWIVCEKMDSESIFTSSPEELWRIILKNMG 173
>gi|441518069|ref|ZP_20999797.1| hypothetical protein GOHSU_24_00470 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441455098|dbj|GAC57758.1| hypothetical protein GOHSU_24_00470 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 195
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 29/187 (15%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G +LIA+ L G F RTVI ++ + G G++LNR S ++ + + A S
Sbjct: 15 GSVLIASTSLIG-PTFVRTVIYVIEHDEYGTLGVVLNRMSQAAVFNVLPQWSELAA--SP 71
Query: 183 RPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
R +F GGP++ E + G ++ QV + C MV +A
Sbjct: 72 RAVFIGGPVQTESAVCLGVVKTGTDLETQPRLHQVRGPV---------C---MVDLDA-D 118
Query: 242 PEDF-------RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWL 294
P+D R F G GW QL++EI G W V PS + L T+ +W E+L
Sbjct: 119 PDDLETVLTGVRIFAGYAGWGAGQLDDEITEGSWLVTTGLPSDL-LAPATVDVWNEVL-- 175
Query: 295 MGRRKVW 301
RR+ W
Sbjct: 176 --RRQEW 180
>gi|224096578|ref|XP_002310662.1| predicted protein [Populus trichocarpa]
gi|222853565|gb|EEE91112.1| predicted protein [Populus trichocarpa]
Length = 1080
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 97 PDAAVNYPPQNSLGDKWAH-TIHEPEKGCLLIATEKLDGVHIFERTVILIL-SMEPMGPS 154
P V Y S K H T+ + G +L+ATEKL+ F+++ ILI+ S + G
Sbjct: 901 PKRNVEYGQTKSHTSKGLHDTVSQVAVGSILVATEKLN-TQPFDKSRILIVKSDQNTGFQ 959
Query: 155 GIILNR----PSLMSIKEMRSTVLDAAGTFSDRPLFFGGPL-EEGLFLVSPKGGGDEVGK 209
G+I N+ +L ++E S +L A PL FGGPL G+ LV+ VG
Sbjct: 960 GLIYNKHLRWDTLQELEE-ESKLLKEA------PLSFGGPLVTRGMPLVALTRRA--VG- 1009
Query: 210 SGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWT 269
G + +V G YF + E + D+ FF G W EQL +EI G W
Sbjct: 1010 -GQYPEVAPGTYFLGQSATLHEIEEISSGNQCVSDYWFFLGFSSWGWEQLFDEIAQGAWN 1068
Query: 270 VA 271
++
Sbjct: 1069 LS 1070
>gi|16272259|ref|NP_438471.1| hypothetical protein HI0304 [Haemophilus influenzae Rd KW20]
gi|260581227|ref|ZP_05849046.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|1175214|sp|P43980.1|Y304_HAEIN RecName: Full=UPF0301 protein HI_0304
gi|1573273|gb|AAC21969.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|260092152|gb|EEW76096.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
Length = 186
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAG 178
+G LIA LD F RTV+ + G G+++N+P+ +SI E+ S + +
Sbjct: 5 QGKFLIAMPHLDDY--FNRTVVFMCEHNEQGSMGLVINQPTDLSIAELYSKLNFMMKNDR 62
Query: 179 TFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE-TVGCAAEMV 235
TF + + GGP+ E G L F+ Y TKE ++ +A++V
Sbjct: 63 TFGNEMVVAGGPMHTERGFIL--------HKNTLNAFQHT----YKVTKELSMTTSADVV 110
Query: 236 KR--NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ + PE + GC W QL +EIR W V + + ++
Sbjct: 111 ETLGSTFAPEKYLVALGCSSWGAGQLEKEIRDNAWLVVSSNDQIL 155
>gi|78486168|ref|YP_392093.1| hypothetical protein Tcr_1827 [Thiomicrospira crunogena XCL-2]
gi|119391287|sp|Q31EK4.1|Y1827_THICR RecName: Full=UPF0301 protein Tcr_1827
gi|78364454|gb|ABB42419.1| Conserved hypothetical protein with DUF179 [Thiomicrospira
crunogena XCL-2]
Length = 188
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 19/148 (12%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRS---TVLDAAGTFSDRPLFFGGP--LE 192
F++TVI I+ G G+++N +++ E+ ++A ++D+P+ GGP LE
Sbjct: 23 FDKTVIYIVEDNEHGTMGLVINLEHNLTVPELLDHFELTVEAPENYADQPVLMGGPVDLE 82
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG--PEDFRFFDG 250
G L P+G + L + + + +K A G PE G
Sbjct: 83 HGFILHEPQGTW------------QKSLPLRDNLAMTVSEDFLKAMADGTAPEKIVVCLG 130
Query: 251 CCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GWEK QLN+EI+A W + +++
Sbjct: 131 FSGWEKGQLNDEIQANNWLTIPYNEALL 158
>gi|145628644|ref|ZP_01784444.1| hypothetical protein CGSHi22121_06500 [Haemophilus influenzae
22.1-21]
gi|144979114|gb|EDJ88800.1| hypothetical protein CGSHi22121_06500 [Haemophilus influenzae
22.1-21]
Length = 185
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAG 178
+G LIA LD F RTV+ + G G+++N+P+ +SI E+ S + +
Sbjct: 4 QGKFLIAMPHLDDY--FNRTVVFMCEHNEQGSMGLVINQPTDLSIAELYSKLNFMMKNDR 61
Query: 179 TFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE-TVGCAAEMV 235
TF + + GGP+ E G L F+ Y TKE ++ +A++V
Sbjct: 62 TFGNEMVVAGGPMHTERGFIL--------HKNTLNAFQHT----YKVTKELSMTTSADVV 109
Query: 236 KR--NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ + PE + GC W QL +EIR W V + + ++
Sbjct: 110 ETLGSTFAPEKYLVALGCSSWGAGQLEKEIRDNAWLVVSSNDQIL 154
>gi|416058473|ref|ZP_11580547.1| YqgE like protein [Aggregatibacter actinomycetemcomitans serotype e
str. SCC393]
gi|347999617|gb|EGY40436.1| YqgE like protein [Aggregatibacter actinomycetemcomitans serotype e
str. SCC393]
Length = 186
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM---RSTVLDAAGTFS 181
LLIA LD + F RTVI I G G++LN+P+ +SI E+ + ++ ++
Sbjct: 8 LLIAMPNLDDSY-FYRTVIYICDHNEKGSMGLVLNQPTDLSIAELGAKMNFMMVTHRIYN 66
Query: 182 DRPLFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
D+ + GGP ++ G L + K D + V + +M +T G E
Sbjct: 67 DKLVLAGGPVNIDRGFILHTNTKVPFDHSYR--VSDNLMLTTSADVVDTFGTMLE----- 119
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE + GC WE QL +EI W V + ++
Sbjct: 120 ---PEKYLVTLGCASWEANQLEQEIMNNSWLVVPATEQIL 156
>gi|325955261|ref|YP_004238921.1| hypothetical protein [Weeksella virosa DSM 16922]
gi|323437879|gb|ADX68343.1| protein of unknown function DUF179 [Weeksella virosa DSM 16922]
Length = 183
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
KG +LIA L+ IF R+V++I G G ILN+ S + + S + S
Sbjct: 8 KGDILIAKPTLNN-DIFNRSVVIITEHSEKGSVGFILNKSSNIPLHIFVSQM------NS 60
Query: 182 DRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYF-GTKETVGCAAEMVKRNA 239
D ++ GGP++ E ++ + + D + +S E++ E +Y+ G E V A M K
Sbjct: 61 DSIVYEGGPVDKENIYYLHSRP--DLIRES---EKIAENIYWSGNYEDVREAINMGK--- 112
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW-EELLWLMGRR 298
+G ++ RF+ G GW QL E+ W + + + LW ++L L G
Sbjct: 113 IGDDEIRFYLGYSGWSSRQLEIELEMNAWILVRERIDI--FRDWEVDLWKKQLTKLGGEN 170
Query: 299 KVW 301
+W
Sbjct: 171 LIW 173
>gi|444336396|ref|ZP_21150870.1| YqgE like protein [Aggregatibacter actinomycetemcomitans serotype a
str. A160]
gi|443547731|gb|ELT57168.1| YqgE like protein [Aggregatibacter actinomycetemcomitans serotype a
str. A160]
Length = 185
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM---RSTVLDAAGTFS 181
LLIA LD + F RTVI I G G++LN+P+ +SI E+ + ++ ++
Sbjct: 7 LLIAMPNLDDSY-FYRTVIYICDHNEKGSMGLVLNQPTDLSIAELGAKMNFMMVTHRIYN 65
Query: 182 DRPLFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
D+ + GGP ++ G L + K D + V + +M +T G E
Sbjct: 66 DKLVLAGGPVNIDRGFILHTNTKVPFDHSYR--VSDNLMLTTSADVVDTFGTMLE----- 118
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE + GC WE QL +EI W V + ++
Sbjct: 119 ---PEKYLVTLGCASWEANQLEQEIMNNSWLVVPATEQIL 155
>gi|383790582|ref|YP_005475156.1| putative transcriptional regulator [Spirochaeta africana DSM 8902]
gi|383107116|gb|AFG37449.1| putative transcriptional regulator [Spirochaeta africana DSM 8902]
Length = 202
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 12/189 (6%)
Query: 109 LGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE 168
+ D A + E G LI+ L + F RTV+LI P G G+++NR + + I++
Sbjct: 1 MSDMDARKVPENLAGHFLISETDLVDPN-FYRTVVLITDHSPEGAFGLVVNRSAEVYIQD 59
Query: 169 MRSTVLDAAGTFSDR-PLFFGGPLEEG-LFLVSPKGGGDEVGKSGVFEQVMEGLYFG--T 224
+ V + AG + P++ GGP+E+ LFL+ G E+ V + + GL F T
Sbjct: 60 L---VPEFAGVPAGSIPVYIGGPVEQQYLFLLHDGLDGLELPDPAV--RPLPGLVFQPLT 114
Query: 225 KETVGCAAEMVKRNAVG-PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESG 283
+ E + R+ G + F G GW QL E+ G W S +I +
Sbjct: 115 ETIAAVLREKITRDTEGIQQHIHVFAGYSGWGPGQLESELHEGAWMTHPASAEIIFHKKP 174
Query: 284 TLGLWEELL 292
G W+E +
Sbjct: 175 EQG-WQEAM 182
>gi|428165074|gb|EKX34079.1| hypothetical protein GUITHDRAFT_147476 [Guillardia theta CCMP2712]
Length = 531
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 51/224 (22%)
Query: 70 ADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHE-PEKGCLLI- 127
ADWRSFRA+LVA E+ + + D+WA+ E E+G +L+
Sbjct: 68 ADWRSFRAKLVAQEKSSSTSLHDS-----------------DEWAYNAGEFVEQGSVLLG 110
Query: 128 ATEKLDGV----HIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
+E + G F + V+L+L G+I+NRP+LM+ K
Sbjct: 111 GSETMLGFGLRQQYFHKCVLLVLYHNKDFTKGVIINRPTLMTTKRGWRR----------- 159
Query: 184 PLFFGGPLEEGLFLVSPKGGGDEV--------GKSGVFEQVMEGLYFGTKETVGCAAEMV 235
++GG ++ + +P+ +EV V V+EG+ + + + A +V
Sbjct: 160 --WYGGDVQG---ITAPEFVQEEVCLHRIQHPAAQEVSATVIEGVSYCSLQD---AERLV 211
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEI-RAGYWTVAACSPSVI 278
+ EDF G GW QL EI + W VA+ S ++
Sbjct: 212 EAGVAKKEDFWLLVGYAGWAPGQLQNEIDQRNSWHVASASSVLL 255
>gi|118615966|ref|YP_904298.1| hypothetical protein MUL_0052 [Mycobacterium ulcerans Agy99]
gi|183980088|ref|YP_001848379.1| hypothetical protein MMAR_0053 [Mycobacterium marinum M]
gi|166227784|sp|A0PKF8.1|Y052_MYCUA RecName: Full=UPF0301 protein MUL_0052
gi|226734027|sp|B2HI98.1|Y053_MYCMM RecName: Full=UPF0301 protein MMAR_0053
gi|118568076|gb|ABL02827.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
gi|183173414|gb|ACC38524.1| conserved hypothetical protein [Mycobacterium marinum M]
Length = 201
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 81/202 (40%), Gaps = 23/202 (11%)
Query: 105 PQNSLGDKWAHTIHEPEKGCLLIA-TEKLDGVHIFERTVILILSMEPMGPSGIILNRPSL 163
PQ D A G LL+A T+ L+ F R+VI I+ G G++LNRPS
Sbjct: 3 PQEDPEDHVAPAAQRVRAGTLLLANTDLLEPT--FRRSVIYIVEHNDGGTLGVVLNRPSE 60
Query: 164 MSIKEMRSTVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEG 219
++ VL + +P +F GGP+ + L L + + G D G SG+
Sbjct: 61 TAVH----NVLPQWAKLAAKPKTMFIGGPVKRDAALCLATLRVGADPGGVSGLRHVAGRI 116
Query: 220 LYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIG 279
+ A +V E R F G GW QL EI W V + PS +
Sbjct: 117 VMVDLDADPDLIAPLV-------EGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDV- 168
Query: 280 LESGTLGLWEELLWLMGRRKVW 301
L LW L RR+ W
Sbjct: 169 LVPPRADLWGRTL----RRQPW 186
>gi|384568143|ref|ZP_10015247.1| putative transcriptional regulator [Saccharomonospora glauca K62]
gi|384523997|gb|EIF01193.1| putative transcriptional regulator [Saccharomonospora glauca K62]
Length = 193
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 76/183 (41%), Gaps = 23/183 (12%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
E G LL+A + + F RTV+ ++ G G++LNRPS + + E+ D
Sbjct: 11 EPGTLLVAAPTMFDPN-FRRTVVFVIDHRAEGTLGVVLNRPSEVGVHEVLPRWGDHVA-- 67
Query: 181 SDRPLFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCA-----AE 233
R +F GGP+E+ L L + + G GV G + V E
Sbjct: 68 EPRAVFVGGPVEKKTALCLAALRTGETAATVPGV---------IGVRGPVALVDLDSDPE 118
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLW 293
++ G R F G GW+ QL EI G W + PS + L + T LW +L
Sbjct: 119 LLATKVRG---LRVFAGYAGWDAGQLAAEIDRGDWLIVPALPSDV-LATPTRDLWGHVLR 174
Query: 294 LMG 296
G
Sbjct: 175 RQG 177
>gi|301100976|ref|XP_002899577.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262103885|gb|EEY61937.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 304
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 28/200 (14%)
Query: 100 AVNYPPQNSLGDKWAHTIHEPEK---GCLLIATEKLDGVHIFERTVILILSMEPMGPSGI 156
A+ PP+NSL + + E G L+A L G IF R+V+++ +P G G
Sbjct: 111 ALKLPPKNSLETRTLDDVQLAENAASGVFLLAHPLLQG--IFSRSVVILTEHKPEGSKGF 168
Query: 157 ILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQV 216
I+N+ +++++ A R F GG V S
Sbjct: 169 IVNK---VTVRKGGPVFTRNAEVLHGRADF----------------GGQRVATSNFPTAN 209
Query: 217 MEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPS 276
L+ G + AA + D F G W QL+ E++ G W VA +P
Sbjct: 210 DPSLFVGVD--LDTAARAIYDETAKQTDVVFMSGVSAWSPGQLDSELKQGSW-VAVKAPV 266
Query: 277 VIGLESGTLGLWEELLWLMG 296
+ L + LW++L+ +G
Sbjct: 267 SLALNASA-DLWQDLMRTLG 285
>gi|345428739|ref|YP_004821855.1| hypothetical protein PARA_01540 [Haemophilus parainfluenzae T3T1]
gi|301154798|emb|CBW14261.1| predicted protein [Haemophilus parainfluenzae T3T1]
Length = 186
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRST---VLDAAG 178
+G LIA +L+ F+ TV+ I G G+++N+P+ +SI E+ S ++
Sbjct: 5 QGQFLIAMPQLEDY--FQNTVVYICEHNEQGSMGLVINQPTDLSIAELYSKMNFMMKNDR 62
Query: 179 TFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR- 237
TFS+ + GGP+ + K E S ++ + ++ T +A++V+
Sbjct: 63 TFSNELVLAGGPVHSERGFILHKKAAKEFEHS---YKITDEMFLTT------SADIVETF 113
Query: 238 -NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ P+ + GC W QL +EI W VA S +++
Sbjct: 114 GSEDAPDKYLVALGCASWTAGQLEQEIADNAWLVAPASDTIL 155
>gi|239948462|ref|ZP_04700215.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239922738|gb|EER22762.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 189
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 74/175 (42%), Gaps = 21/175 (12%)
Query: 109 LGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR-PSLMSIK 167
+GDK H + G L+AT + I+ +++I +LS G G+I NR + + +K
Sbjct: 1 MGDKIFHNL----SGKTLVATPHVITKGIYHKSLIYMLSHTEEGAIGLIFNRLVNHIDLK 56
Query: 168 EMRSTVLDAAGTFSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
D T P++ GGP+E +G FL S + + L F
Sbjct: 57 SFFKIKNDEITTPVMVPIYLGGPVEHEKGFFLHSSDYNKNLL------------LDFHND 104
Query: 226 ETVGCAAEMVKRNAVG--PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
V E+ + A G P++ F G W+ EQL EE+ W V C+ I
Sbjct: 105 LAVSSNLEISEDIAFGKGPKNSLFIVGYTAWKPEQLEEELEKNLWLVMDCNKEFI 159
>gi|377557911|ref|ZP_09787534.1| hypothetical protein GOOTI_024_00030 [Gordonia otitidis NBRC
100426]
gi|377524906|dbj|GAB32699.1| hypothetical protein GOOTI_024_00030 [Gordonia otitidis NBRC
100426]
Length = 221
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 94 SVDPDAAVNYPPQNSLGDKWAHTI---------HEPEKGCLLIATEKLDGVHIFERTVIL 144
+V D+A ++ P+NS G + I + G LL+A+ L F R+VI
Sbjct: 3 TVGGDSADDFSPENSDGTEGGSGIPGARDMESANSVRPGTLLLASTDLIE-PTFARSVIY 61
Query: 145 ILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEGLFLVSPKGGG 204
++ G G+ILNR S ++ + D A S + LF GGP+++ L
Sbjct: 62 VIEHNDGGSLGVILNRMSQTAVHNILPQWTDLAA--SPQALFIGGPVKQDAALCL----- 114
Query: 205 DEVGKSGVFEQVMEGLYFGTKETVGC---AAEMVKRNAVGPEDFRFFDGCCGWEKEQLNE 261
V K GV + EGL V A E + + E R F G GW QL+
Sbjct: 115 -GVAKHGVEIEAFEGLRPVDGRVVLVDLDADEELLAEVL--EGVRIFAGYAGWGIGQLDA 171
Query: 262 EIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRRKVW 301
E+ W +A+ P + L T+ +W ++L RR+ W
Sbjct: 172 ELAQDSWLLASALPRDL-LAPPTVDVWADVL----RRQPW 206
>gi|408492671|ref|YP_006869040.1| transcriptional regulator, putative [Psychroflexus torquis ATCC
700755]
gi|408469946|gb|AFU70290.1| transcriptional regulator, putative [Psychroflexus torquis ATCC
700755]
Length = 187
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P +G +L++ G F R+VIL+ ++ G G ILN+P ++++E+
Sbjct: 5 QPHRGDILVSEPSTIGDLTFNRSVILLAHLDAEGVVGFILNKPLDINLEELIPE------ 58
Query: 179 TFSDRPLFFGGPLE-EGLFLVS--PKGGGDEVGKSGVFEQVMEGLYF-GTKETVGCAAEM 234
+ +F GGP+E E L+ + P + V ++ EG+Y+ G+ ET+ E+
Sbjct: 59 IEENFKIFNGGPVEQENLYFIHNVPHLILESV-------EIKEGIYWGGSFETI---VEL 108
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLG-LWEELLW 293
+ + + +FF G GW+ QL EI W + + + L S G W+E +
Sbjct: 109 INTRQITSANIKFFLGYSGWDPSQLETEIDMNTWVIDYETKANDILNSLKYGQFWQEKMK 168
Query: 294 LMG 296
+G
Sbjct: 169 KLG 171
>gi|383454045|ref|YP_005368034.1| hypothetical protein COCOR_02043 [Corallococcus coralloides DSM
2259]
gi|380728440|gb|AFE04442.1| hypothetical protein COCOR_02043 [Corallococcus coralloides DSM
2259]
Length = 185
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM-RSTVLDAAGTFSDRPLFFGGPLEEGLF 196
F R+VIL++ G G+++NR + +++ E+ R +D + +P+F GGP+E
Sbjct: 24 FYRSVILMIEHGETGSMGLVVNRGAPLTLGELARGQSMDISTDRVSQPVFVGGPVE---- 79
Query: 197 LVSPKGGGDEVGKSGVFEQ--VMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGW 254
P+ G V E+ V+ GLY T+ +++R + RF G GW
Sbjct: 80 ---PQRGFVLHDDESVAEKHSVLPGLYLSV--TLDALGPLLQRTS---PRVRFCLGYAGW 131
Query: 255 EKEQLNEEIRAGYWTVA-ACSPSVIGLESGTLGLWEELLWLMG 296
+QL EI AG W A A + +V+G + LW+ L +G
Sbjct: 132 GPKQLENEIAAGSWLYADATADAVLGQDPAK--LWDATLRGLG 172
>gi|68248906|ref|YP_248018.1| hypothetical protein NTHI0415 [Haemophilus influenzae 86-028NP]
gi|81336683|sp|Q4QNN9.1|Y415_HAEI8 RecName: Full=UPF0301 protein NTHI0415
gi|68057105|gb|AAX87358.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
Length = 186
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAG 178
+G LIA LD F RTV+ + G G+++N+P+ +SI E+ S + +
Sbjct: 5 QGKFLIAMPHLDDY--FNRTVVFMCEHNEQGSMGLVINQPTDLSIAELYSKLNFMMKNDR 62
Query: 179 TFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE-TVGCAAEMV 235
TF + + GGP+ E G L F+ Y TKE ++ +A++V
Sbjct: 63 TFGNEMVVAGGPVHTERGFIL--------HKNTLNAFQHT----YKVTKELSMTTSADVV 110
Query: 236 KR--NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ + PE + GC W QL +EIR W V + + ++
Sbjct: 111 ETLGSTFAPEKYLVALGCSSWGAGQLEKEIRDNAWLVVSSNDQIL 155
>gi|392954237|ref|ZP_10319789.1| protein of unknown function DUF179 [Hydrocarboniphaga effusa AP103]
gi|391858136|gb|EIT68666.1| protein of unknown function DUF179 [Hydrocarboniphaga effusa AP103]
Length = 186
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 12/159 (7%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAAGTF 180
K L+A L+ F TV L+ G G+++NRP+ +++ M + +D
Sbjct: 8 KNQFLVAMPGLEDDQ-FNHTVSLLCEHNDQGAVGLVINRPTELALTAMLDQMGVDHEKMG 66
Query: 181 SDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
DRP+++GGP++ E F+V + GG E QV + LY T + A +
Sbjct: 67 EDRPIYWGGPVQPERGFVVHREPGGWESSL-----QVQDDLYITTSRDILGAI----GSG 117
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GPE + G GW QL +EI W S++
Sbjct: 118 EGPEHYIVTLGYAGWGAGQLEDEILHNSWLNTPVDSSIL 156
>gi|313206029|ref|YP_004045206.1| hypothetical protein Riean_0532 [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|383485341|ref|YP_005394253.1| hypothetical protein RA0C_0757 [Riemerella anatipestifer ATCC 11845
= DSM 15868]
gi|386321987|ref|YP_006018149.1| Putative transcriptional regulator [Riemerella anatipestifer RA-GD]
gi|416112046|ref|ZP_11593070.1| putative transcriptional regulator [Riemerella anatipestifer RA-YM]
gi|442314783|ref|YP_007356086.1| hypothetical protein G148_1088 [Riemerella anatipestifer RA-CH-2]
gi|312445345|gb|ADQ81700.1| protein of unknown function DUF179 [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|315022342|gb|EFT35370.1| putative transcriptional regulator [Riemerella anatipestifer RA-YM]
gi|325336530|gb|ADZ12804.1| Putative transcriptional regulator [Riemerella anatipestifer RA-GD]
gi|380460026|gb|AFD55710.1| hypothetical protein RA0C_0757 [Riemerella anatipestifer ATCC 11845
= DSM 15868]
gi|441483706|gb|AGC40392.1| hypothetical protein G148_1088 [Riemerella anatipestifer RA-CH-2]
Length = 182
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
KG +LI+T + G IF R+V+LI++ + G G+ILN+ + + + ++ +S
Sbjct: 6 KGKILISTPDVSG-DIFSRSVVLIINHDEEGAFGLILNKKNPVLSHHFQKSLSPNLEVYS 64
Query: 182 DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
GGP+ KG + E++ +G F + A M+ +
Sbjct: 65 ------GGPVGTTQMFFIIKGNEPALDA----EKIAKGYTFTENASKVIGAIMM--GTLA 112
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYW 268
PED + F G GW QL+ EI+ YW
Sbjct: 113 PEDIKIFYGYSGWGAMQLDTEIKNRYW 139
>gi|226355418|ref|YP_002785158.1| hypothetical protein Deide_05660 [Deinococcus deserti VCD115]
gi|226317408|gb|ACO45404.1| Conserved hypothetical protein [Deinococcus deserti VCD115]
Length = 185
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 23/159 (14%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
L+A+ L G +FE TVIL+L + G G+I+N P+ ++ E+ + DAAG +R
Sbjct: 16 TFLVASPHLQG-EVFEGTVILLLEHDRKGAMGLIVNAPTPQTVAELMA---DAAG--QNR 69
Query: 184 PLFFGGPLEEGL---FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
+ GGP++ L P G E+ ++++ L+ + + E+++
Sbjct: 70 RAWLGGPVDPTLGWCLYHHPVGLDGEI-------KLVDDLHLSS------SLEVLRAVMA 116
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWT-VAACSPSVI 278
+++ G GW QL EE RAG W V +P ++
Sbjct: 117 SDQEYMLILGYAGWTAGQLEEEARAGAWVWVEQSTPELL 155
>gi|148827458|ref|YP_001292211.1| hypothetical protein CGSHiGG_04335 [Haemophilus influenzae PittGG]
gi|378696495|ref|YP_005178453.1| hypothetical protein HIB_04230 [Haemophilus influenzae 10810]
gi|148718700|gb|ABQ99827.1| hypothetical protein CGSHiGG_04335 [Haemophilus influenzae PittGG]
gi|301169014|emb|CBW28611.1| predicted protein [Haemophilus influenzae 10810]
Length = 185
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAG 178
+G LIA LD F RTV+ + G G+++N+P+ +SI E+ S + +
Sbjct: 4 QGKFLIAMPHLDDY--FNRTVVFMCEHNEQGSMGLVINQPTDLSIAELYSKLNFMMKNDR 61
Query: 179 TFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE-TVGCAAEMV 235
TF + + GGP+ E G L F+ Y TKE ++ +A++V
Sbjct: 62 TFGNEMVVAGGPVHTERGFIL--------HKNTLNAFQHT----YKVTKELSMTTSADVV 109
Query: 236 KR--NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ + PE + GC W QL +EIR W V + + ++
Sbjct: 110 ETLGSTFAPEKYLVALGCSSWGAGQLEKEIRDNAWLVVSSNDQIL 154
>gi|406831224|ref|ZP_11090818.1| hypothetical protein SpalD1_06295 [Schlesneria paludicola DSM
18645]
Length = 189
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 18/158 (11%)
Query: 119 EPEKGCLLIATEKL-DGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
E +G LIA ++L DG F + V+L+L G G+++NRPS + + + +
Sbjct: 3 ESLRGQFLIAAKRLRDGN--FYKAVVLLLEHSDQGAMGLVINRPSSIRVSHALAGHFNLP 60
Query: 178 GTFSDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
T D +F GGP+E L ++ ++ G S V+ GL+ G + A E V
Sbjct: 61 DT--DDVVFGGGPVEPSALVILHDDANFEDEGPS-----VVPGLFVGGSPS---AFESVI 110
Query: 237 RNAVGPE----DFRFFDGCCGWEKEQLNEEIRAGYWTV 270
R A + FR G GW QL EI G W +
Sbjct: 111 REAADSDHLKHSFRVLSGYAGWGAGQLESEIDRGDWLL 148
>gi|296392446|ref|YP_003657330.1| hypothetical protein Srot_0006 [Segniliparus rotundus DSM 44985]
gi|296179593|gb|ADG96499.1| protein of unknown function DUF179 [Segniliparus rotundus DSM
44985]
Length = 200
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 10/193 (5%)
Query: 109 LGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE 168
+G ++ I G LL+A+ L G F+RTV+ IL + G G+++NRP+ +S+
Sbjct: 1 MGLPFSAQIESVRAGSLLLASTDLRG-DTFQRTVVYILEHDERGTFGLVVNRPTKISV-- 57
Query: 169 MRSTVLDAAGTFSDRP--LFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
++V A F+ P + GGP+ ++GL + G +SG E + +
Sbjct: 58 --ASVAPAWEDFAAEPCVVHNGGPVRKDGLLCLGLPREGVAAAESGSTESLGFSVVAPDI 115
Query: 226 ETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTL 285
V + + A + R F G GW QL E+ G W V + P + + +G +
Sbjct: 116 AVVDLEGD-AQLIASSLQYVRIFAGYSGWASGQLAAELSRGAWYVVSGLPQDVFVGAG-V 173
Query: 286 GLWEELLWLMGRR 298
LW +++ G R
Sbjct: 174 DLWGQVIRRHGAR 186
>gi|383829592|ref|ZP_09984681.1| putative transcriptional regulator [Saccharomonospora xinjiangensis
XJ-54]
gi|383462245|gb|EID54335.1| putative transcriptional regulator [Saccharomonospora xinjiangensis
XJ-54]
Length = 190
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 13/180 (7%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
E E G LL+A + + F RTV+ ++ P G G++LNRPS +++ E+ D
Sbjct: 6 EVEPGTLLVAAPTMFDPN-FRRTVVFVIDHRPEGTLGVVLNRPSEVAVHEVLPHWGDHVA 64
Query: 179 TFSDRPLFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
R +F GGP+E+ L L + + G GV V+
Sbjct: 65 --EPRSVFVGGPVEKKTALCLATLRTGETAATVPGVIAVRGPVALVDLDSDPDALVAKVR 122
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
R F G GW+ QL EI G W + P + L + LW ++L G
Sbjct: 123 -------GLRVFAGYAGWDAGQLAGEIERGDWLIVPALPGDV-LATPARDLWGQVLRRQG 174
>gi|317478912|ref|ZP_07938059.1| hypothetical protein HMPREF1007_01175 [Bacteroides sp. 4_1_36]
gi|316904889|gb|EFV26696.1| hypothetical protein HMPREF1007_01175 [Bacteroides sp. 4_1_36]
Length = 197
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P +G +LI+ E H+F R+VIL++ G G++LN+P + + + VL
Sbjct: 17 PARGKVLIS-EPFLCDHMFGRSVILLVDHTHDGTMGLVLNKPLPLFLND----VLKDFDC 71
Query: 180 FSDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYF-GTKETVGCAAEMVKR 237
+ P++ GGPL + LF + G G +G Y G E + +++
Sbjct: 72 PENIPIYKGGPLSTDTLFYLHTLKGITRALPIG------KGFYLNGDFEAI--KDYIMQG 123
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG- 296
N V RFF G GWE EQL EI W V + S + E+ + LW++ L +G
Sbjct: 124 NPVKGR-IRFFLGYSGWEYEQLGREIEENTWLVGKENISSLMDEAASGTLWKKALCKLGA 182
Query: 297 RRKVW 301
+ ++W
Sbjct: 183 KYEIW 187
>gi|408793015|ref|ZP_11204625.1| hypothetical protein LEP1GSC017_1655 [Leptospira meyeri serovar
Hardjo str. Went 5]
gi|408464425|gb|EKJ88150.1| hypothetical protein LEP1GSC017_1655 [Leptospira meyeri serovar
Hardjo str. Went 5]
Length = 188
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 13/178 (7%)
Query: 116 TIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLD 175
I + +G LLI+ + F ++V+L++ + G G++LN+P+ +++ + + D
Sbjct: 3 NIPDSTRGKLLISNSSVIQ-DFFHKSVVLMVDHDDDGAFGLVLNKPTDQTMESLIKNLPD 61
Query: 176 AAGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
A ++ + +F GGP++ VS G + GV +++ G+Y + E++
Sbjct: 62 TA--YASKQVFSGGPVDN--MFVSILHNGKQTEDPGV--EIVPGIYMA--RSFDTMIEVL 113
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA-ACSPSVIGLESGTLGLWEELL 292
+ + FR G GW QL E W V+ S++ E + +W E L
Sbjct: 114 SSDQI---QFRVLQGYAGWSSGQLESEFERLSWVVSDLVDESIVFSEDESEVVWREAL 168
>gi|423306408|ref|ZP_17284407.1| hypothetical protein HMPREF1072_03347 [Bacteroides uniformis
CL03T00C23]
gi|423309002|ref|ZP_17286992.1| hypothetical protein HMPREF1073_01742 [Bacteroides uniformis
CL03T12C37]
gi|392678915|gb|EIY72313.1| hypothetical protein HMPREF1072_03347 [Bacteroides uniformis
CL03T00C23]
gi|392685741|gb|EIY79052.1| hypothetical protein HMPREF1073_01742 [Bacteroides uniformis
CL03T12C37]
Length = 202
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P +G +LI+ E H+F R+VIL++ G G++LN+P + + + VL
Sbjct: 22 PAQGKVLIS-EPFLCDHMFGRSVILLVDHTHDGTMGLVLNKPLPLFLND----VLKDFDC 76
Query: 180 FSDRPLFFGGPLEEG--LFLVSPKG--GGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
+ P++ GGPL +L + +G G +GK G + + G + K+ + +
Sbjct: 77 PENIPIYKGGPLSTDTLFYLHTLEGITGALSIGK-GFY---LNGDFEAIKDYIMQGNPVK 132
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLM 295
R RFF G GWE EQL EI W V + S + E+ + LW++ L +
Sbjct: 133 GR-------IRFFLGYSGWEYEQLGREIEENTWLVGKENISSLMDEAASGTLWKKALCKL 185
Query: 296 G-RRKVW 301
G + ++W
Sbjct: 186 GAKYEIW 192
>gi|357473863|ref|XP_003607216.1| hypothetical protein MTR_4g074610 [Medicago truncatula]
gi|355508271|gb|AES89413.1| hypothetical protein MTR_4g074610 [Medicago truncatula]
Length = 1138
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 18/174 (10%)
Query: 101 VNYPPQNSLGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEP-MGPSGIILN 159
+N P N W T+ G +LIATEKL GV F+ + ILI++ +P G G+I+N
Sbjct: 970 INLPVSNG----WQETLPHVVVGSVLIATEKLLGVDPFDGSKILIVAADPATGFQGLIIN 1025
Query: 160 RPSLMSIKEMRSTVLDA-AGTFSDRPLFFGGP-LEEGLFLVSPKGGGDEVGKSGVFEQVM 217
K ++ T L+ + PL GGP ++ G+ L+S +++
Sbjct: 1026 -------KHLKWTNLEEDLEKLKEAPLSLGGPVVKTGMPLLSLT----RTVSGYNLPEIL 1074
Query: 218 EGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
G+YF + +K + + FF G WE QL E+ G W ++
Sbjct: 1075 PGIYFLDYVVTTSIIQKLKYAKEPVDSYWFFFGYSNWEWNQLYHEMAEGAWNLS 1128
>gi|84494424|ref|ZP_00993543.1| hypothetical protein JNB_06499 [Janibacter sp. HTCC2649]
gi|84383917|gb|EAP99797.1| hypothetical protein JNB_06499 [Janibacter sp. HTCC2649]
Length = 212
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 77/179 (43%), Gaps = 29/179 (16%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL++T +LD +F R+VIL+L + G G++LN+P + +VL G
Sbjct: 34 GRLLVSTPQLDD-GVFHRSVILVLQHDVNGAQGVVLNKPLGADVD----SVLPGWGEHIS 88
Query: 183 RP--LFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM---V 235
P LF GGP L+ L L++ +GG + G+K G A +
Sbjct: 89 SPQTLFQGGPVQLDSALGLITFRGGAEPPP--------------GSKRLFGSVAIVDLDT 134
Query: 236 KRNAVGPE--DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
V PE R F G GW QL E+R G W V + L LWE +L
Sbjct: 135 PPTLVMPEVGGLRIFAGYAGWSSGQLEGELRRGSWFVVDSQSGDL-LTGDPDHLWESVL 192
>gi|343085802|ref|YP_004775097.1| hypothetical protein [Cyclobacterium marinum DSM 745]
gi|342354336|gb|AEL26866.1| protein of unknown function DUF179 [Cyclobacterium marinum DSM 745]
Length = 189
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 30/186 (16%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P+ G LLI+ L + F R+V+L+ +G G++LN+ S+ + E+
Sbjct: 9 PKSGSLLISEPFLQDEN-FVRSVVLLCENNELGSFGLVLNKLSIFKLDELLEDC-----E 62
Query: 180 FSDRPLFFGGPLEEGLF---------LVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGC 230
+++ ++ GGP+E+ L GD++ G F +++ G Y
Sbjct: 63 LTNKEVYVGGPVEQNTLHFIYCGEQLLEDSVALGDQLWWGGDFNELI-GKY--------- 112
Query: 231 AAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEE 290
K V +FRFF G GWE+ QL+EE+ W V S + + LW
Sbjct: 113 -----KSGLVDITNFRFFLGYSGWEEGQLSEELDEKTWIVCDNSHTKKIFKVAPDELWRV 167
Query: 291 LLWLMG 296
+L MG
Sbjct: 168 ILKNMG 173
>gi|315635116|ref|ZP_07890394.1| alginate biosynthesis nucleoside diphosphate kinase regulator AlgH
[Aggregatibacter segnis ATCC 33393]
gi|315476078|gb|EFU66832.1| alginate biosynthesis nucleoside diphosphate kinase regulator AlgH
[Aggregatibacter segnis ATCC 33393]
Length = 186
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 13/158 (8%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM---RSTVLDAAGTFS 181
LLIA LD + F R+VI I G G++LN+P+ +SI E+ + ++ + T+S
Sbjct: 8 LLIAMPNLDDSY-FYRSVIYICEHNEKGSMGLVLNQPTDLSIAELGAKMNFMMVSNRTYS 66
Query: 182 DRPLFFGGPLEEGLFLVSPKGGGDEVGKS-GVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
D+ + GGP+ + + S V + +M +T G E
Sbjct: 67 DKLVLAGGPVNVDRGFILHTNTHEPFDHSYRVNDNLMLTTSADVVDTFGTLLE------- 119
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE + GC WE QL EI W V + ++
Sbjct: 120 -PEKYLVALGCASWEPNQLEREIMNNSWLVVPATEQIL 156
>gi|256381053|ref|YP_003104713.1| hypothetical protein Amir_7076 [Actinosynnema mirum DSM 43827]
gi|255925356|gb|ACU40867.1| protein of unknown function DUF179 [Actinosynnema mirum DSM 43827]
Length = 193
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 79/184 (42%), Gaps = 21/184 (11%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
E E G LL+A L+ + F RTV+ ++ G G++LNRPS +++ + VL A G
Sbjct: 9 EVEPGSLLVAAPTLNDSN-FRRTVVYVIDHRGEGSLGVVLNRPSEVAVHD----VLPAWG 63
Query: 179 TFSDRP--LFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
RP +F GGP+E+ L L + + G D GV G V
Sbjct: 64 PHVSRPQAVFIGGPVEQKTALCLAALRPGEDHRSLDGV---------VGVHGPVALVDLD 114
Query: 235 VKRNAVGP--EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+ ++ P R F G GW + QL E+ W V P + L + LW +L
Sbjct: 115 SEPESLLPRVRGLRVFAGYAGWGEGQLEGEVEREDWIVVPGLPDDV-LSPPGVDLWGRVL 173
Query: 293 WLMG 296
G
Sbjct: 174 RRQG 177
>gi|385680156|ref|ZP_10054084.1| hypothetical protein AATC3_29713 [Amycolatopsis sp. ATCC 39116]
Length = 172
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 20/165 (12%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRP--LFFGGPLEE-- 193
F RTV+ I+ G G++LNRPS + + + VL + G P +F GGP+E+
Sbjct: 6 FRRTVVFIIDHREEGTLGVVLNRPSDVPVDD----VLPSWGRHVVEPQSVFVGGPVEKKT 61
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPE--DFRFFDGC 251
L L + + G G G+ G + V +A+ P+ R F G
Sbjct: 62 ALCLAALRAGETASGVPGLI---------GVRGPVALVDLDADPDALVPKVRGLRVFAGY 112
Query: 252 CGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GW+ QL+ EI G W + PS + L + LW ++L G
Sbjct: 113 AGWDSGQLDGEIDRGDWLIVPALPSDV-LATPERDLWGQVLRRQG 156
>gi|160887701|ref|ZP_02068704.1| hypothetical protein BACUNI_00102 [Bacteroides uniformis ATCC 8492]
gi|270294154|ref|ZP_06200356.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|156862832|gb|EDO56263.1| putative ACR, COG1678 [Bacteroides uniformis ATCC 8492]
gi|270275621|gb|EFA21481.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 202
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P +G +LI+ E H+F R+VIL++ G G++LN+P + + + VL
Sbjct: 22 PARGKVLIS-EPFLCDHMFGRSVILLVDHTHDGTMGLVLNKPLPLFLND----VLKDFDC 76
Query: 180 FSDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYF-GTKETVGCAAEMVKR 237
+ P++ GGPL + LF + G G +G Y G E + +++
Sbjct: 77 PENIPIYKGGPLSTDTLFYLHTLKGITRALPIG------KGFYLNGDFEAI--KDYIMQG 128
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG- 296
N V RFF G GWE EQL EI W V + S + E+ + LW++ L +G
Sbjct: 129 NPVKGR-IRFFLGYSGWEYEQLGREIEENTWLVGKENISSLMDEAASGTLWKKALCKLGA 187
Query: 297 RRKVW 301
+ ++W
Sbjct: 188 KYEIW 192
>gi|326796932|ref|YP_004314752.1| hypothetical protein Marme_3706 [Marinomonas mediterranea MMB-1]
gi|326547696|gb|ADZ92916.1| UPF0301 protein yqgE [Marinomonas mediterranea MMB-1]
Length = 188
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 70/175 (40%), Gaps = 35/175 (20%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV--LDAAGTFSDRPLFFGGPLEE-- 193
FE TV+ + G GI++NRPS + E+ + A + P++ GGP+E
Sbjct: 24 FEHTVVYLCEHTEEGAMGIVINRPSSIDFTELADHLGMKVEAPRLASEPIYVGGPVESER 83
Query: 194 GLFL-VSPKGGG------DEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFR 246
G L S K G DEV S E +E + G GP +R
Sbjct: 84 GFILHTSDKSWGNSLCVTDEVNLSAALE-TLENIAIGN----------------GPSMYR 126
Query: 247 FFDGCCGWEKEQLNEEIRAGYWTVAAC-------SPSVIGLESGTLGLWEELLWL 294
GC GW++ QL EI W V +PS + + T L ++ WL
Sbjct: 127 IALGCAGWDEGQLESEIANNDWLVCEADLDVLFNTPSDMQFSAATKVLGVDMTWL 181
>gi|260582597|ref|ZP_05850387.1| conserved hypothetical protein [Haemophilus influenzae NT127]
gi|260094408|gb|EEW78306.1| conserved hypothetical protein [Haemophilus influenzae NT127]
Length = 186
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAG 178
+G LIA LD F RTV+ + G G+++N+P+ +SI E+ S + +
Sbjct: 5 QGKFLIAMPHLDDY--FNRTVVFMCEHNEQGSMGLVINQPTDLSIAELYSKLNFMMKNDR 62
Query: 179 TFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE-TVGCAAEMV 235
TF + + GGP+ E G L F+ Y T+E ++ +A++V
Sbjct: 63 TFGNEMVVAGGPVHTERGFIL--------HKNTLNAFQHT----YKVTEELSMTTSADVV 110
Query: 236 KR--NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ + PE + GC W QL +EIR W VA+ ++
Sbjct: 111 ETLGSTFAPEKYLVALGCSSWGAGQLEKEIRDNAWLVASSKDQIL 155
>gi|375150486|ref|YP_005012927.1| UPF0301 protein yqgE [Niastella koreensis GR20-10]
gi|361064532|gb|AEW03524.1| UPF0301 protein yqgE [Niastella koreensis GR20-10]
Length = 183
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 16/161 (9%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P G LLIA L + F RTV+ + + G G ++NR ++ E+ + + +
Sbjct: 4 PGPGILLIAEPFLKDPN-FSRTVVFLCDHQDEGSFGFVINRVFGHTLNELMNDLDELK-- 60
Query: 180 FSDRPLFFGGPLEEGL--FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
P+F+GGP++ FL D + S +V++G+Y+G A ++K
Sbjct: 61 ---LPVFYGGPVQMDTIHFLHQYP---DLIPGS---YEVLDGIYWGGD--FETAITLIKA 109
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
++ RFF G GW QLN+E++ W A + ++
Sbjct: 110 GSIDTTKIRFFIGYSGWGSGQLNDELKEKSWLTAQATRKLV 150
>gi|409198099|ref|ZP_11226762.1| hypothetical protein MsalJ2_13728 [Marinilabilia salmonicolor JCM
21150]
Length = 197
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 14/184 (7%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P G +LIA L G + F R +ILI G G++LN+ + + E+ +L G
Sbjct: 17 KPAAGRVLIAEPFLQGPY-FGRAIILITEHNEKGTVGLVLNKSTELYPDEVIDDILSFEG 75
Query: 179 TFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
LF GGP+ G G Q+ E +Y+G +M+
Sbjct: 76 E-----LFVGGPVSSNTLNFLHTLGPIVPGAV----QITETVYWGGD--FEHLKKMINEG 124
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGR- 297
+FF G GW +QL+ E+ W V+ S I + +WE+ + MG
Sbjct: 125 EASSNSVKFFAGYSGWAPDQLDGELAENSWVVSTLSDEFI-MTRDVDDIWEKAMAQMGDI 183
Query: 298 RKVW 301
K W
Sbjct: 184 YKTW 187
>gi|386840507|ref|YP_006245565.1| hypothetical protein SHJG_4421 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374100808|gb|AEY89692.1| hypothetical protein SHJG_4421 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451793800|gb|AGF63849.1| hypothetical protein SHJGH_4184 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 193
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + ++ D AG
Sbjct: 12 GRLLVATPALADPN-FDRAVVLLLDHDEEGSLGVVLNRPTPVVVGDILEDWADLAGEPG- 69
Query: 183 RPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
+F GGP L+ L + GG D G + +V + E A + +AV
Sbjct: 70 -VVFQGGPVSLDSALGVAVIPGGADGDGAPLGWRRVHGAIGLVDLE----APPELLASAV 124
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
G R F G GW QL +E+ G W V P + + LW E+L
Sbjct: 125 G--SLRIFAGYAGWGPGQLEDELVEGAWYVVESEPGDVSSPAPER-LWREVL 173
>gi|223999401|ref|XP_002289373.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974581|gb|EED92910.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 646
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 44/238 (18%)
Query: 71 DWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHE-PEKGCLLIAT 129
DWR+FRA+LV +E + D +N N+ +WA+ + E+G ++++
Sbjct: 80 DWRAFRAQLVRSE----------TADTTNTMNGKTDNTSTSRWAYDSGDLVERGSIVLSV 129
Query: 130 EKLD---------GVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV------- 173
D + ++++L+L ++ GIILNRP+ + +K+ V
Sbjct: 130 PSSDPSANDIDALNNQCYRKSIVLVLDVQQNFIQGIILNRPTNIGVKQGMQFVQPGHGEV 189
Query: 174 -------LDAAGTFSDR-PLFFG----GPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLY 221
D +G+ R ++FG GP E ++ ++G + + V+ G+
Sbjct: 190 FENEIGSCDGSGSSPHRWKVWFGGEVAGPFSEYPQVMCLHSVNTDLGVE-LSDAVLPGIL 248
Query: 222 FGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIR-AGYWTVAACSPSVI 278
+ + A +V P F F G CGWE E+ G W V + I
Sbjct: 249 ITSFDG---AQRLVDAGEANPSSFWLFCGICGWETSSFYSEMHDEGLWLVVSSDGGTI 303
>gi|337291938|ref|YP_004630959.1| hypothetical protein CULC22_02338 [Corynebacterium ulcerans
BR-AD22]
gi|397655085|ref|YP_006495768.1| hypothetical protein CULC0102_2335 [Corynebacterium ulcerans 0102]
gi|334700244|gb|AEG85040.1| hypothetical protein CULC22_02338 [Corynebacterium ulcerans
BR-AD22]
gi|393404041|dbj|BAM28533.1| hypothetical protein CULC0102_2335 [Corynebacterium ulcerans 0102]
Length = 198
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 21/181 (11%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
+EP G LLIA ++ +F R VIL+L + G+ L S +++ V+
Sbjct: 13 NEPAPGMLLIAAPSMES-SVFARNVILLLEHNEVTTFGVNLASRSDVAV----FNVMPEW 67
Query: 178 GTFSDRP--LFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGT--KETVGCAA 232
+P L+ GGPL ++G+ + G ++ F ++ L + G AA
Sbjct: 68 APLVSKPQALYIGGPLNQQGVVGLGVTAPGVDIAAHPHFNRLANRLVHVDLRAQPEGIAA 127
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA-ACSPSVIGLESGTLGLWEEL 291
++ R F G WE QLNEEI G W VA A S VI + G++ +W ++
Sbjct: 128 DL--------SGLRLFAGYVEWEPGQLNEEIEKGEWYVAPALSSDVIAV--GSVDVWGDV 177
Query: 292 L 292
+
Sbjct: 178 M 178
>gi|373849797|ref|ZP_09592598.1| protein of unknown function DUF179 [Opitutaceae bacterium TAV5]
gi|372475962|gb|EHP35971.1| protein of unknown function DUF179 [Opitutaceae bacterium TAV5]
Length = 186
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+A L + F RTV+L+ + G GI+LNRP S+ + A G +
Sbjct: 12 GSLLVAHPVLRDPN-FRRTVVLLSGHDGEGALGIVLNRPLRKSLGSLGGEF--ALGPLAH 68
Query: 183 RPLFFGGPLEEGLFLV---SPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
PLF GGP+ L+ + GGD G F+ L FG AAE+ +
Sbjct: 69 VPLFNGGPVAGRQVLLCAWRSQLGGDAEG----FQ-----LMFGIDPE--KAAELAGQPG 117
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
VG R F G GW QL +E++ W V+ S++ E + LW +L
Sbjct: 118 VG---LRAFLGYAGWSAGQLEQELKQDTWVVSNLPASLMETEP-DVRLWRVVL 166
>gi|319775827|ref|YP_004138315.1| hypothetical protein HICON_11710 [Haemophilus influenzae F3047]
gi|319896637|ref|YP_004134830.1| hypothetical protein HIBPF02490 [Haemophilus influenzae F3031]
gi|317432139|emb|CBY80490.1| conserved hypothetical protein [Haemophilus influenzae F3031]
gi|317450418|emb|CBY86634.1| conserved hypothetical protein [Haemophilus influenzae F3047]
Length = 185
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAG 178
+G LIA LD F RTV+ + G G+++N+P+ +SI E+ S + +
Sbjct: 4 QGKFLIAMPHLDDY--FNRTVVFMCEHNEQGSMGLVINQPTDLSIAELYSKLNFMMKNDR 61
Query: 179 TFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE-TVGCAAEMV 235
TF + + GGP+ E G L F+ Y T+E ++ +A++V
Sbjct: 62 TFGNEMVVAGGPMHTERGFIL--------HKNTLNAFQHT----YKVTEELSMTTSADVV 109
Query: 236 KR--NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ + PE + GC W QL +EIR W V + + ++
Sbjct: 110 ETLGSTFAPEKYLVALGCSSWGAGQLEKEIRDNAWLVVSSNDQIL 154
>gi|283781630|ref|YP_003372385.1| hypothetical protein Psta_3870 [Pirellula staleyi DSM 6068]
gi|283440083|gb|ADB18525.1| protein of unknown function DUF179 [Pirellula staleyi DSM 6068]
Length = 183
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 22/178 (12%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGT 179
+G L A+ L + F RTV+L++ + G G++L RP ++ E+ R T A T
Sbjct: 5 QGHFLAASPHLGDPNFF-RTVVLMIKHDAQGALGLVLTRPMQETVAELWQRVTAETIANT 63
Query: 180 FSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGT-KETVGCAAEMVKRN 238
S + GGP+ L + E +V +G+YF E + K+
Sbjct: 64 GS---VHLGGPVNGPLVAIHRMASAAEA-------EVFDGVYFSAHSEQISRIVHQTKK- 112
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
+ F G GW QL E+ G W +A + ++ S T LWE ++ +G
Sbjct: 113 -----PYLLFAGYSGWSGGQLEAELEQGGWLIAPATTELV--FSSTDDLWERVVQSIG 163
>gi|218130922|ref|ZP_03459726.1| hypothetical protein BACEGG_02523 [Bacteroides eggerthii DSM 20697]
gi|317476233|ref|ZP_07935484.1| hypothetical protein HMPREF1016_02467 [Bacteroides eggerthii
1_2_48FAA]
gi|217987266|gb|EEC53597.1| putative ACR, COG1678 [Bacteroides eggerthii DSM 20697]
gi|316907644|gb|EFV29347.1| hypothetical protein HMPREF1016_02467 [Bacteroides eggerthii
1_2_48FAA]
Length = 197
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 17/185 (9%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P +G +LI+ E H+F R+VIL++ G G+ILN+P + + ++ S +
Sbjct: 17 PTQGKILIS-EPFLCDHMFGRSVILLVDHAQDGTMGLILNKPLPLFLNDLLSEI----DC 71
Query: 180 FSDRPLFFGGPLEEG--LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
+ P++ GGP+ +L + + D V G+Y + M +
Sbjct: 72 RENIPIYKGGPISTDTLFYLHTLENIADSF-------PVANGIYL-NGDFAAIRQFMAEG 123
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLW-LMG 296
N++ + RFF G GWE QL +EI W V S + E W+ L L G
Sbjct: 124 NSIKGK-IRFFLGYSGWEPGQLKQEIEENTWLVDNADFSSLMDEKSEKNTWKNALSNLGG 182
Query: 297 RRKVW 301
+ ++W
Sbjct: 183 KYEMW 187
>gi|403737601|ref|ZP_10950329.1| hypothetical protein AUCHE_05_00030 [Austwickia chelonae NBRC
105200]
gi|403191713|dbj|GAB77099.1| hypothetical protein AUCHE_05_00030 [Austwickia chelonae NBRC
105200]
Length = 184
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 76/177 (42%), Gaps = 26/177 (14%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG--TF 180
G LL+AT ++ +F R V+L+L + G G++LN+P + + VL G
Sbjct: 7 GRLLVATPQIT-AQVFRRGVVLLLHHDTAGAHGLLLNKPIGVDVDR----VLPGWGEQVC 61
Query: 181 SDRPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE--MVK 236
S R LF GGP ++ L LV GG L FG V A V
Sbjct: 62 SPRELFQGGPVSMDTALGLVWLPGGDRPPAVH---------LLFGAVGVVDLDAPPGSVS 112
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPS-VIGLESGTLGLWEELL 292
A G R F G GW + QL EEI G W V +P L+ G GLW +L
Sbjct: 113 PGAAG---TRIFAGYSGWSEGQLEEEIDEGSWYVVDATPGDAFCLDPG--GLWRAVL 164
>gi|329123671|ref|ZP_08252231.1| YqgE like protein [Haemophilus aegyptius ATCC 11116]
gi|327469870|gb|EGF15335.1| YqgE like protein [Haemophilus aegyptius ATCC 11116]
Length = 186
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAG 178
+G LIA LD F RTV+ + G G+++N+P+ +SI E+ S + +
Sbjct: 5 QGKFLIAMPHLDDY--FNRTVVFMCEHNEQGSMGLVINQPTDLSIAELYSKLNFMMKNDR 62
Query: 179 TFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE-TVGCAAEMV 235
TF + + GGP+ E G L F+ Y T+E ++ +A++V
Sbjct: 63 TFGNEMVVAGGPMHTERGFIL--------HKNTLNAFQHT----YKVTEELSMTTSADVV 110
Query: 236 KR--NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ + PE + GC W QL +EIR W V + + ++
Sbjct: 111 ETLGSTFAPEKYLVALGCSSWGAGQLEKEIRDNAWLVVSSNDQIL 155
>gi|390445572|ref|ZP_10233310.1| hypothetical protein A3SI_18208 [Nitritalea halalkaliphila LW7]
gi|389661674|gb|EIM73274.1| hypothetical protein A3SI_18208 [Nitritalea halalkaliphila LW7]
Length = 190
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 30/183 (16%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL++ L + F R+V+L+ + +G G++LN+ S++++ E+ +
Sbjct: 13 GTLLVSEPFLQDEN-FMRSVVLLCEHQEVGSFGLVLNKQSILTLDEVLEEM-----PLPH 66
Query: 183 RPLFFGGPLEEGL--FLVSPK----GG---GDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
P+F GGP+E+ F+ K GG G++V G F+ V++GL G
Sbjct: 67 IPVFVGGPVEQNTLHFIYKSKHKFPGGIRLGEDVYWGGDFDLVVKGLLEG---------- 116
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLW 293
+ RFF G GW QL++E++ W V + E + LW +L
Sbjct: 117 -----KIDEASIRFFIGYSGWSAGQLDQEVQENTWIVTNDIGAECLFEHTSDELWRYILK 171
Query: 294 LMG 296
+G
Sbjct: 172 YLG 174
>gi|33152803|ref|NP_874156.1| hypothetical protein HD1794 [Haemophilus ducreyi 35000HP]
gi|46577396|sp|Q7VKS7.1|Y1794_HAEDU RecName: Full=UPF0301 protein HD_1794
gi|33149027|gb|AAP96545.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
Length = 186
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 19/182 (10%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAG 178
+G +IAT ++D + F+RTVI I G G+I+N P+ +S+ E+ + + +
Sbjct: 6 QGKFIIATPEMDDEY-FDRTVIYICEHNDNGTIGVIINTPTDLSVLELLTRMDFQMAKPR 64
Query: 179 TFS-DRPLFFGGPLEEGL-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
++ D+ + GGP+ + F+V K + V + + T+ + +++
Sbjct: 65 IYTQDQMVLNGGPVNQDRGFIVHSKTDHEFTHSYKVTDDI----------TLTTSGDVLD 114
Query: 237 R--NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWL 294
PE F GC W+ QL +EI YW ++ + + E+ L W E +
Sbjct: 115 SFGTQTAPEKFIVCLGCSTWKPHQLEQEIAQNYWLLSEANNQTL-FETSYLDRWVEANEM 173
Query: 295 MG 296
+G
Sbjct: 174 LG 175
>gi|109157492|pdb|2DO8|A Chain A, Solution Structure Of Upf0301 Protein Hd_1794
Length = 188
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 19/182 (10%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAG 178
+G +IAT ++D + F+RTVI I G G+I+N P+ +S+ E+ + + +
Sbjct: 6 QGKFIIATPEMDDEY-FDRTVIYICEHNDNGTIGVIINTPTDLSVLELLTRMDFQMAKPR 64
Query: 179 TFS-DRPLFFGGPLEEGL-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
++ D+ + GGP+ + F+V K + V + + T+ + +++
Sbjct: 65 IYTQDQMVLNGGPVNQDRGFIVHSKTDHEFTHSYKVTDDI----------TLTTSGDVLD 114
Query: 237 R--NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWL 294
PE F GC W+ QL +EI YW ++ + + E+ L W E +
Sbjct: 115 SFGTQTAPEKFIVCLGCSTWKPHQLEQEIAQNYWLLSEANNQTL-FETSYLDRWVEANEM 173
Query: 295 MG 296
+G
Sbjct: 174 LG 175
>gi|251793468|ref|YP_003008197.1| hypothetical protein NT05HA_1783 [Aggregatibacter aphrophilus
NJ8700]
gi|416893278|ref|ZP_11924519.1| hypothetical protein ATCC33389_1639 [Aggregatibacter aphrophilus
ATCC 33389]
gi|422337385|ref|ZP_16418356.1| hypothetical protein HMPREF9335_01544 [Aggregatibacter aphrophilus
F0387]
gi|247534864|gb|ACS98110.1| conserved hypothetical protein [Aggregatibacter aphrophilus NJ8700]
gi|347814046|gb|EGY30697.1| hypothetical protein ATCC33389_1639 [Aggregatibacter aphrophilus
ATCC 33389]
gi|353345412|gb|EHB89707.1| hypothetical protein HMPREF9335_01544 [Aggregatibacter aphrophilus
F0387]
Length = 186
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 29/166 (17%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM---RSTVLDAAGTFS 181
LLIA LD + F RTVI I G G+++N+P+ +SI E+ + ++ T++
Sbjct: 8 LLIAMPNLDDSY-FYRTVIYICEHNEKGSMGLVINQPTDLSIAELGAKMNFMMVTDRTYN 66
Query: 182 DRPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFE---QVMEGLYFGTK----ETVGCAA 232
D+ + GGP ++ G L F+ +V + L T +T G
Sbjct: 67 DKLVLAGGPVNIDRGFIL--------HTNTPNTFDHSYKVNDNLVLTTSADVVDTFGTMG 118
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
E PE + GC WE QL +EI W V + ++
Sbjct: 119 E--------PEKYLVTLGCASWEPNQLEQEIVHDSWLVVPATEQIL 156
>gi|254773097|ref|ZP_05214613.1| hypothetical protein MaviaA2_00226 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 201
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 82/197 (41%), Gaps = 25/197 (12%)
Query: 104 PPQNSLGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSL 163
PP D A G LL+A L F R+VI I+ G G++LNRPS
Sbjct: 2 PPPEDPEDYVAPAAQRVRAGTLLLANTDLLE-PTFRRSVIYIVEHNDGGTLGVVLNRPSD 60
Query: 164 MSIKEMRSTVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEG 219
++ VL T + +P +F GGP+ + L L + + G D G G+
Sbjct: 61 TAVYN----VLPQWTTLAAKPKTMFIGGPVKRDAALCLATLRVGADPQGAPGLRH----- 111
Query: 220 LYFGTKETVGCAAEMVKRNAVGP--EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPS- 276
G V A+ +A+ P E R F G GW QL EI W V + PS
Sbjct: 112 -VDGRVVMVDLDAD---PDAIAPLVEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSD 167
Query: 277 -VIGLESGTLGLWEELL 292
++G S LW ++L
Sbjct: 168 VLVGPRS---DLWGQVL 181
>gi|294911900|ref|XP_002778093.1| membrane associated RING finger, putative [Perkinsus marinus ATCC
50983]
gi|239886214|gb|EER09888.1| membrane associated RING finger, putative [Perkinsus marinus ATCC
50983]
Length = 388
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 68/156 (43%), Gaps = 14/156 (8%)
Query: 121 EKGCLLIATEKLDGV-HIFERTVILILSMEPMGPSGIILNRPSLMS-IKEMRSTVLDAAG 178
KG LL+A + + G IF R+V L+L + MG +ILN+P S I + R A G
Sbjct: 193 HKGALLVANDNMIGPGSIFYRSVALVLEHDHMGSLALILNKPVARSPIADYRDA---AEG 249
Query: 179 TFSDRPLFFGGPL---EEGLFLVSPKGGGDEVGKSGVFEQVME-GLYFGTKETVGCAAEM 234
+ GGP+ EE + +G VG + Q E +Y G T A
Sbjct: 250 PPVELLTVRGGPVRINEERRIMHQARG---VVGARVLLSQDREDSVYLGGDLTAVLAGIA 306
Query: 235 VKRNAVGPEDFR--FFDGCCGWEKEQLNEEIRAGYW 268
+ G E FDGC W QL E+RAG W
Sbjct: 307 QQDRGAGDERAHAIIFDGCARWAPGQLYGELRAGSW 342
>gi|344201017|ref|YP_004785343.1| hypothetical protein Acife_2943 [Acidithiobacillus ferrivorans SS3]
gi|343776461|gb|AEM49017.1| UPF0301 protein yqgE [Acidithiobacillus ferrivorans SS3]
Length = 185
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 20/163 (12%)
Query: 122 KGCLLIATEKL-DGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE-MRSTVLDAAGT 179
K LLIA +L DGV F+RTVI++ G G+++NR +++ + +R+ + +
Sbjct: 7 KNHLLIAMPELHDGV--FDRTVIVVCEHNAEGAMGVVINRLVDINMSDALRAVDIQPSEE 64
Query: 180 FSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
RP+++GGP+ + G L SP+G + + L + + ++++
Sbjct: 65 MIHRPVYWGGPVQPQHGFILHSPRG------------EWLSSLEINDDLALTSSPDILQA 112
Query: 238 NAVGPEDFRFF--DGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
A E R+ G GW +QL EE++ W +V+
Sbjct: 113 IAQHEEPQRYLLTLGYVGWGAQQLEEELKENAWLHGPLDMAVV 155
>gi|41406143|ref|NP_958979.1| hypothetical protein MAP0045 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118463947|ref|YP_879352.1| hypothetical protein MAV_0052 [Mycobacterium avium 104]
gi|417749088|ref|ZP_12397495.1| putative transcriptional regulator [Mycobacterium avium subsp.
paratuberculosis S397]
gi|440775393|ref|ZP_20954267.1| hypothetical protein D522_00301 [Mycobacterium avium subsp.
paratuberculosis S5]
gi|81415033|sp|Q744T3.1|Y045_MYCPA RecName: Full=UPF0301 protein MAP_0045
gi|166227783|sp|A0Q8W4.1|Y052_MYCA1 RecName: Full=UPF0301 protein MAV_0052
gi|41394491|gb|AAS02362.1| hypothetical protein MAP_0045 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118165234|gb|ABK66131.1| conserved hypothetical protein [Mycobacterium avium 104]
gi|336459440|gb|EGO38382.1| putative transcriptional regulator [Mycobacterium avium subsp.
paratuberculosis S397]
gi|436724604|gb|ELP48291.1| hypothetical protein D522_00301 [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 201
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 82/197 (41%), Gaps = 25/197 (12%)
Query: 104 PPQNSLGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSL 163
PP D A G LL+A L F R+VI I+ G G++LNRPS
Sbjct: 2 PPPEDPEDYVAPAAQRVRAGTLLLANTDLLE-PTFRRSVIYIVEHNDGGTLGVVLNRPSD 60
Query: 164 MSIKEMRSTVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEG 219
++ VL T + +P +F GGP+ + L L + + G D G G+
Sbjct: 61 TAVYN----VLPQWTTLAAKPKTMFIGGPVKRDAALCLATLRVGADPQGAPGLRH----- 111
Query: 220 LYFGTKETVGCAAEMVKRNAVGP--EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPS- 276
G V A+ +A+ P E R F G GW QL EI W V + PS
Sbjct: 112 -VDGRVVMVDLDAD---PDAIAPLVEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSD 167
Query: 277 -VIGLESGTLGLWEELL 292
++G S LW ++L
Sbjct: 168 VLVGPRS---DLWGQVL 181
>gi|404398928|ref|ZP_10990512.1| hypothetical protein PfusU_04180 [Pseudomonas fuscovaginae UPB0736]
Length = 189
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 14/145 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRP---SLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEG 194
F +T+ I+ G G+++NRP +L I E +D P++ GGP++
Sbjct: 25 FAQTLTYIVEHSANGAMGLVINRPQSLNLADILEQLRPDIDPPARCQHLPIYSGGPVQTD 84
Query: 195 L-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
F++ P +GKS +EGL T + V A + +GPE G G
Sbjct: 85 RGFVLHP------IGKSYQATVELEGLALSTSQDVLFAIA----DGIGPEHSLIALGYAG 134
Query: 254 WEKEQLNEEIRAGYWTVAACSPSVI 278
WE QL E+ W SP ++
Sbjct: 135 WEAGQLEAELADNAWLTCPFSPEIL 159
>gi|374608589|ref|ZP_09681387.1| protein of unknown function DUF179 [Mycobacterium tusciae JS617]
gi|373553175|gb|EHP79770.1| protein of unknown function DUF179 [Mycobacterium tusciae JS617]
Length = 201
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 78/182 (42%), Gaps = 23/182 (12%)
Query: 118 HEPEKGCLLIA-TEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
H G LL+A T+ L+ F R+VI I+ G G++LNRPS ++ VL
Sbjct: 16 HRVRAGTLLLANTDLLEPT--FRRSVIYIVEHNDGGTLGVVLNRPSETAVY----NVLPQ 69
Query: 177 AGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAA 232
+ +P +F GGP+ + L L + + G D G G+ G V A
Sbjct: 70 WAKLATKPKTMFIGGPVKRDAALCLATMRVGVDPAGLPGLRH------VQGRMAMVDLDA 123
Query: 233 EMVKRNAVGP--EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEE 290
+ +AV P E R F G GW QL EI W V + PS + L LW
Sbjct: 124 D---PDAVAPVIEGVRIFAGYSGWTIGQLEGEIERDDWIVLSAMPSDV-LSEPRNDLWAR 179
Query: 291 LL 292
+L
Sbjct: 180 VL 181
>gi|383776067|ref|YP_005460633.1| hypothetical protein AMIS_8970 [Actinoplanes missouriensis 431]
gi|381369299|dbj|BAL86117.1| hypothetical protein AMIS_8970 [Actinoplanes missouriensis 431]
Length = 199
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
E G LL+AT L + F+RTV+L+++ E G G++LNR + + + E VL G
Sbjct: 16 ESMTGQLLVATPTLKDPN-FDRTVVLLVAHETGGALGVVLNRATEVPVAE----VLGNWG 70
Query: 179 TFSDRP--LFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
+ P LF GGP++ + + + + F V L GT + + + ++
Sbjct: 71 ELAGDPAVLFEGGPVQPESAICLARTRPEVKKRVSGFHPVSGAL--GTLD-LSADPDRMR 127
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
N G R F G GW QL EEI AG W V P
Sbjct: 128 ENVAG---IRVFAGYSGWSAGQLEEEIAAGSWFVFDALP 163
>gi|338533221|ref|YP_004666555.1| hypothetical protein LILAB_17875 [Myxococcus fulvus HW-1]
gi|337259317|gb|AEI65477.1| hypothetical protein LILAB_17875 [Myxococcus fulvus HW-1]
Length = 181
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 80/182 (43%), Gaps = 31/182 (17%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM-RSTVLDAAGTFSDR 183
LL+A +L G F R+V+L+L G G+++NR + +++ E+ R L A +
Sbjct: 8 LLLAMPQL-GDPNFHRSVVLMLEHSETGSMGLVINRGAPLTLGELARGQNLGIAAGRREH 66
Query: 184 PLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+F GGP+E G L + + V+ GLY V +A+G
Sbjct: 67 AVFLGGPVEPQRGFVL-------HDDTEQREKHSVLPGLYLS-----------VTLDALG 108
Query: 242 P------EDFRFFDGCCGWEKEQLNEEIRAGYWTVA-ACSPSVIGLESGTLGLWEELLWL 294
P RF G GW +QL EI AG W A + SV+G E LW+ L
Sbjct: 109 PLLTNPNPRLRFCLGYAGWGPKQLESEIAAGSWLFTEATAESVLGQEPSK--LWDATLRS 166
Query: 295 MG 296
MG
Sbjct: 167 MG 168
>gi|162455091|ref|YP_001617458.1| hypothetical protein sce6809 [Sorangium cellulosum So ce56]
gi|161165673|emb|CAN96978.1| hypothetical protein sce6809 [Sorangium cellulosum So ce56]
Length = 198
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 8/180 (4%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRP 184
LIA+ L G F+RTV+L+ G G ++NRP+ M++ E+ S P
Sbjct: 12 FLIASPPL-GDPNFDRTVVLLAVHSEGGALGFVVNRPAPMTLGELLSFAGYGNDLKDPAP 70
Query: 185 LFFGGPLEEG---LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
++ GGP++ + + P G +E G V +V +T+ AA+ V+ A
Sbjct: 71 VYLGGPVQPSSGWILCLDPALGAEETGVIPVGSRVRVTSSRSAFDTL--AADAVRGTAAA 128
Query: 242 -PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRRKV 300
P G GW QL EI AG W + ++ + WE+ L+G R +
Sbjct: 129 DPRRRTVLLGYSGWGPGQLEREIAAGAWLPVSLDERIL-FDVEAAQRWEQAYALLGLRPI 187
>gi|145632548|ref|ZP_01788282.1| hypothetical protein CGSHi3655_01999 [Haemophilus influenzae 3655]
gi|145636561|ref|ZP_01792229.1| hypothetical protein CGSHiHH_08787 [Haemophilus influenzae PittHH]
gi|145638790|ref|ZP_01794399.1| hypothetical protein CGSHiII_08746 [Haemophilus influenzae PittII]
gi|229845006|ref|ZP_04465143.1| hypothetical protein CGSHi6P18H1_04612 [Haemophilus influenzae
6P18H1]
gi|386265299|ref|YP_005828791.1| hypothetical protein R2846_0275 [Haemophilus influenzae R2846]
gi|144986743|gb|EDJ93295.1| hypothetical protein CGSHi3655_01999 [Haemophilus influenzae 3655]
gi|145270386|gb|EDK10321.1| hypothetical protein CGSHiHH_08787 [Haemophilus influenzae PittHH]
gi|145272385|gb|EDK12293.1| hypothetical protein CGSHiII_08746 [Haemophilus influenzae PittII]
gi|229812140|gb|EEP47832.1| hypothetical protein CGSHi6P18H1_04612 [Haemophilus influenzae
6P18H1]
gi|309750280|gb|ADO80264.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
gi|309972535|gb|ADO95736.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
Length = 186
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAG 178
+G LIA LD F RTV+ + G G+++N+P+ +SI E+ S + +
Sbjct: 5 QGKFLIAMPHLDDY--FNRTVVFMCEHNEQGSMGLVINQPTDLSIAELYSKLNFMMKNDR 62
Query: 179 TFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE-TVGCAAEMV 235
TF + + GGP+ E G L F+ Y T+E ++ +A++V
Sbjct: 63 TFGNEMVVAGGPVHTERGFIL--------HKNTLNAFQHT----YKVTEELSMTTSADVV 110
Query: 236 KR--NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ + PE + GC W QL +EIR W V + + ++
Sbjct: 111 ETLGSTFAPEKYLVALGCSSWGAGQLEKEIRDNAWLVVSSNDQIL 155
>gi|423129889|ref|ZP_17117564.1| hypothetical protein HMPREF9714_00964 [Myroides odoratimimus CCUG
12901]
gi|371647633|gb|EHO13130.1| hypothetical protein HMPREF9714_00964 [Myroides odoratimimus CCUG
12901]
Length = 188
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 19/182 (10%)
Query: 121 EKGCLLIAT-EKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
++G LI+ L+ IF R+VIL+ G G ILN+P +++ ++ +A+ T
Sbjct: 8 QRGDQLISLPSALNADLIFSRSVILLTEHSQDGSVGFILNKPLDLTLSDLLPNT-EASFT 66
Query: 180 FSDRPLFFGGPLEEG-LFLV--SPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
D GGP+++ +F + P+ D + +++ LY+G ++
Sbjct: 67 IYD-----GGPVQKNRIFYIHTRPELIPDSI-------HIVDDLYWGVD--FEELNNILS 112
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
+ D RFF G GW+ +QL EI+ +W + + LW+ L MG
Sbjct: 113 LGILNKNDIRFFLGYSGWDCDQLKNEIQDNFWIASNKLDTKNIFSQSPTELWKNSLSKMG 172
Query: 297 RR 298
+
Sbjct: 173 SK 174
>gi|189500618|ref|YP_001960088.1| hypothetical protein Cphamn1_1688 [Chlorobium phaeobacteroides BS1]
gi|189496059|gb|ACE04607.1| protein of unknown function DUF179 [Chlorobium phaeobacteroides
BS1]
Length = 187
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 13/142 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPLE-EGLF 196
F+RTV+L+ G G ILNRP + + E S D D PL GGP++ + +
Sbjct: 25 FKRTVLLMCEHNDEGSLGFILNRPMEIKVSEAISGFDDL-----DVPLHMGGPVQVDTVH 79
Query: 197 LVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEK 256
+ +G D + S +V+ G+++G ++ + ++ V P + RFF G GW
Sbjct: 80 YLHRRG--DVIDGS---LEVLPGVFWGGEQE--QLSFLMSSGVVSPGEVRFFLGYAGWSS 132
Query: 257 EQLNEEIRAGYWTVAACSPSVI 278
QL +E G W + +I
Sbjct: 133 GQLEKEFEEGSWYRTLAADEII 154
>gi|145640244|ref|ZP_01795828.1| hypothetical protein CGSHiR3021_09305 [Haemophilus influenzae
R3021]
gi|145274830|gb|EDK14692.1| hypothetical protein CGSHiR3021_09305 [Haemophilus influenzae
22.4-21]
Length = 185
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAG 178
+G LIA LD F RTV+ + G G+++N+P+ +SI E+ S + +
Sbjct: 4 QGKFLIAMPHLDDY--FNRTVVFMCEHNEQGSMGLVINQPTDLSIAELYSKLNFMMKNDR 61
Query: 179 TFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE-TVGCAAEMV 235
TF + + GGP+ E G L F+ Y T+E ++ +A++V
Sbjct: 62 TFGNEMVVAGGPVHTERGFIL--------HKNTLNAFQHT----YKVTEELSMTTSADVV 109
Query: 236 KR--NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ + PE + GC W QL +EIR W V + + ++
Sbjct: 110 ETLGSTFAPEKYLVALGCSSWGAGQLEKEIRDNAWLVVSSNDQIL 154
>gi|53803467|ref|YP_114752.1| hypothetical protein MCA2336 [Methylococcus capsulatus str. Bath]
gi|81681382|sp|Q605E8.1|Y2336_METCA RecName: Full=UPF0301 protein MCA2336 2
gi|53757228|gb|AAU91519.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
Length = 188
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 66/158 (41%), Gaps = 15/158 (9%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE-MRSTVLD-AAGTFSD 182
LIA L H F +TV L+ G GII+NRPS + + + MR +D D
Sbjct: 12 FLIAMPGLTDPH-FAKTVTLVCQHNADGALGIIINRPSELKLSDIMRQMEIDLKVAELGD 70
Query: 183 RPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
P+FFGGP+ E G L P V S + V E L T + E V R
Sbjct: 71 LPVFFGGPVHPERGFILHEPA----TVWASTLV--VSERLALTTSRDI---LEAVGRGE- 120
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GP G GW + QL EI W A +VI
Sbjct: 121 GPRRMLLALGYAGWGQGQLEREIIDNSWLNAPSDNAVI 158
>gi|407452248|ref|YP_006723973.1| hypothetical protein B739_1479 [Riemerella anatipestifer RA-CH-1]
gi|403313231|gb|AFR36072.1| hypothetical protein B739_1479 [Riemerella anatipestifer RA-CH-1]
Length = 182
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
KG +LI+T + G IF R+V+LI++ + G G+ILN+ + + + ++ +S
Sbjct: 6 KGKILISTPDVSG-DIFSRSVVLIINHDEEGAFGLILNKKNPVLSHHFQKSLSPNLEVYS 64
Query: 182 DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
GGP+ KG + E++ +G F + A M+ +
Sbjct: 65 ------GGPVGTTQMFFIIKGNEPALDA----EKIAKGYTFTENASKVIGAIMM--GTLA 112
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYW 268
PE+ + F G GW QL+ EI+ YW
Sbjct: 113 PENIKIFYGYSGWGAMQLDTEIKNRYW 139
>gi|449436711|ref|XP_004136136.1| PREDICTED: uncharacterized protein LOC101215020 [Cucumis sativus]
gi|449489118|ref|XP_004158220.1| PREDICTED: uncharacterized LOC101215020 [Cucumis sativus]
Length = 1118
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSM-EPMGPSGIILNRPSLMSIKEMRSTVLDAAG--- 178
G +LIAT+KL G +F+ ILI+ + +G G+I+N K ++ L G
Sbjct: 963 GTMLIATDKLVGSQLFDNAQILIVKADQTIGFHGLIIN-------KHIKWDTLQDMGEGL 1015
Query: 179 -TFSDRPLFFGGPL---EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
++ PL GGPL + L +++ K D + +++ G+YF + E
Sbjct: 1016 DILNEAPLSLGGPLIKRKMPLVMLTQKVFKD------LQPEILPGIYFLNQVATLHEIEE 1069
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIG 279
+K + FF G W +QL +EI G W ++ S +G
Sbjct: 1070 IKSGNHSVSGYWFFLGYSSWGWDQLYDEIAEGVWRLSEDGASYLG 1114
>gi|152967717|ref|YP_001363501.1| hypothetical protein Krad_3774 [Kineococcus radiotolerans SRS30216]
gi|151362234|gb|ABS05237.1| protein of unknown function DUF179 [Kineococcus radiotolerans
SRS30216]
Length = 198
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 71/153 (46%), Gaps = 15/153 (9%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F R+V+L+L+ + G G+++NRP + ++ +VL F+
Sbjct: 15 GRLLLATPALTDEN-FARSVVLVLNHDEDGALGVVVNRPLDVDVE----SVLPGWQPFAT 69
Query: 183 RP--LFFGGP--LEEGLFLVS-PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
P LF GGP L+ L LV+ P D VG VF V GL + E V
Sbjct: 70 APGKLFQGGPVALDSALGLVAVPGDEPDPVGVRRVFGSV--GLGSVGLVDLDTPPEAVVA 127
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270
G R F G GW QL EI G W V
Sbjct: 128 QLSG---LRIFAGYAGWSAAQLEAEIAEGAWFV 157
>gi|336118901|ref|YP_004573673.1| hypothetical protein MLP_32560 [Microlunatus phosphovorus NM-1]
gi|334686685|dbj|BAK36270.1| hypothetical protein MLP_32560 [Microlunatus phosphovorus NM-1]
Length = 187
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 118 HEPEKGCLLIATEKL-DGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+P+ G LLIA+ L DGV F++TV+L+L + G G+ILN S +++ + + +D
Sbjct: 4 RDPQPGDLLIASAGLSDGV--FDQTVVLVLDSDADGSLGVILNAISQTTLESVLPSWVDI 61
Query: 177 AGTFSDRPLFFGGPLEE--GLFLVSPKGGGDEV-GKSGVFEQVMEGLYFGTKETVGCAAE 233
R LF GGP+ + L S +E G +F++V L+ T + A
Sbjct: 62 VS--EPRVLFHGGPVSPNGAICLASVVAQAEEPPGWRPLFDRVGL-LHLDTPIEIVSGAY 118
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYW-TVAACSPSVIGLESGTLGLWEELL 292
D R F G GW QL EI W V A V G LGLW +L
Sbjct: 119 ---------ADLRIFAGYAGWSPGQLVGEIARRMWHVVPATYDDVFGRHP--LGLWRRVL 167
>gi|433651036|ref|YP_007296038.1| putative transcriptional regulator [Mycobacterium smegmatis JS623]
gi|433300813|gb|AGB26633.1| putative transcriptional regulator [Mycobacterium smegmatis JS623]
Length = 201
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 78/187 (41%), Gaps = 19/187 (10%)
Query: 111 DKWAHTIHEPEKGCLLIA-TEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM 169
D A H G LL+A T+ L+ F R+VI I+ G G++LNRPS ++
Sbjct: 9 DFVAPAAHRVRAGTLLLANTDLLEPT--FRRSVIYIVEHNDGGTLGVVLNRPSETAVY-- 64
Query: 170 RSTVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
VL + +P +F GGP+ + L L + + G + G G+ +
Sbjct: 65 --NVLPQWAKLATKPKTMFIGGPVKRDAALCLATLRVGLEASGVPGLRHVQGRMVMVDLD 122
Query: 226 ETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTL 285
A MV E R F G GW QL EI W V + PS + +E +
Sbjct: 123 ADPDTVAPMV-------EGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVEP-RV 174
Query: 286 GLWEELL 292
LW +L
Sbjct: 175 DLWSRVL 181
>gi|430745362|ref|YP_007204491.1| transcriptional regulator [Singulisphaera acidiphila DSM 18658]
gi|430017082|gb|AGA28796.1| putative transcriptional regulator [Singulisphaera acidiphila DSM
18658]
Length = 185
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 14/179 (7%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
KG L+IAT +LD IF R+VIL+L G G+ILN P + + ++ + D +
Sbjct: 5 KGQLVIATPQLD-TPIFSRSVILMLDHGEDGAMGVILNHPMNVVVTDLSGRIFDEEFVW- 62
Query: 182 DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
D+ L GGP+ L ++ +E+ +QV+ G+Y + T E++ R +
Sbjct: 63 DKTLCLGGPVTGPLLVLHTI---EEMAD----QQVIPGVYCTMEAT--KVQELISRKS-- 111
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRRKV 300
E GW +QL E W + I E+ LW+ ++ + +K+
Sbjct: 112 -EPSLVIANYSGWGPDQLESEFETDSWLTLPAQIAHIFREADDKELWKAVVSEVNTQKL 169
>gi|297738252|emb|CBI27453.3| unnamed protein product [Vitis vinifera]
Length = 1106
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSM-EPMGPSGIILNRP-SLMSIKEMRSTVLDAAGTF 180
G +L+AT+KL H F+++ ILI+ + G G+I+N+ + S+ E+ V
Sbjct: 951 GSILVATDKLLDAHPFDKSTILIVKADQATGFHGLIINKHINWESLNELAEGV----DHL 1006
Query: 181 SDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFE----QVMEGLYFGTKETVGCAAEMVK 236
+ PL FGGP V +G VF+ +V+ G+YF + E +K
Sbjct: 1007 KEAPLSFGGP-------VVKRGKPLVALTRRVFKDQHPEVLPGVYFLDQSATVSEIEGLK 1059
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
++ FF G W +QL +EI G W +
Sbjct: 1060 SGNESVSEYWFFVGFSNWGWDQLFDEIAEGAWNIT 1094
>gi|21673495|ref|NP_661560.1| hypothetical protein CT0663 [Chlorobium tepidum TLS]
gi|81791636|sp|Q8KEM4.1|Y663_CHLTE RecName: Full=UPF0301 protein CT0663
gi|21646602|gb|AAM71902.1| conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 187
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 20/156 (12%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS- 181
G LL+A+ L + F+RTV+L+ G G ILN+P M V +A F
Sbjct: 11 GKLLLASANLLDPN-FKRTVLLMCEHNEEGSIGFILNKP-------MEFKVCEAISGFDE 62
Query: 182 -DRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFG-TKETVGCAAEMVKRN 238
D PL GGP++ + + ++ +G +V V +V+ GL++G KE + + ++
Sbjct: 63 IDEPLHMGGPVQVDTVHVLHTRG---DVIDGAV--EVIPGLFWGGDKEQL---SYLINTG 114
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACS 274
+ + RFF G GW QL E G W A S
Sbjct: 115 VIKASEVRFFLGYAGWSAGQLEAEFEEGSWYTADAS 150
>gi|333024854|ref|ZP_08452918.1| hypothetical protein STTU_2358 [Streptomyces sp. Tu6071]
gi|332744706|gb|EGJ75147.1| hypothetical protein STTU_2358 [Streptomyces sp. Tu6071]
Length = 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 78/175 (44%), Gaps = 18/175 (10%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F R V+L+L + G G++LNRP+ + + + +L+ G +
Sbjct: 9 GRLLVATPALADAN-FARAVVLVLDHDAEGTLGVVLNRPTPVGVDD----ILEGWGPLAG 63
Query: 183 RP--LFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
P +F GGP L+ L + V P G G + +V + ET +
Sbjct: 64 APGVVFQGGPVSLDSALGVAVVPGEPGARTSPLG-WRRVYGAIGLVDLET------PPEL 116
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
A R F G GW QL +E+ AG W V P I E GLW E+L
Sbjct: 117 LAAALGALRIFAGYAGWGPGQLEDELEAGAWYVVDAEPGDISAEH-PEGLWREVL 170
>gi|300115247|ref|YP_003761822.1| hypothetical protein Nwat_2735 [Nitrosococcus watsonii C-113]
gi|299541184|gb|ADJ29501.1| protein of unknown function DUF179 [Nitrosococcus watsonii C-113]
Length = 184
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 67/168 (39%), Gaps = 29/168 (17%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRS--TVLDAAGT 179
+ LIA L+ + F RTV LI G GII+NRP +++ +M V D
Sbjct: 5 RNHFLIAMPALNDAN-FARTVTLICEHNQDGAMGIIINRPLSITLDQMLQHIKVKDYPQA 63
Query: 180 FSDRPLFFGGPL--EEGLFLVSPKGG-------GDEVGKSGVFEQVMEGLYFGTKETVGC 230
+ P+F GGP+ E G L P G GDEVG + +++ + G
Sbjct: 64 VGEMPVFLGGPVQQERGFVLHRPIGHWETTLKIGDEVGMT-TSRDILDAITQGK------ 116
Query: 231 AAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GP G GW QL +E+ W S +V+
Sbjct: 117 ----------GPPQTLIALGYAGWGPHQLEQELAENAWLSTPASSTVV 154
>gi|332663068|ref|YP_004445856.1| hypothetical protein [Haliscomenobacter hydrossis DSM 1100]
gi|332331882|gb|AEE48983.1| UPF0301 protein yqgE [Haliscomenobacter hydrossis DSM 1100]
Length = 184
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 17/158 (10%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEGLFL 197
F+R +++ G G ++NRP + + +L+ F + +FFGGP+E L
Sbjct: 21 FKRAAVILCDHGGEGSIGFVINRP----LNHQINAILEDFPEF-EAEVFFGGPVEADTTL 75
Query: 198 VSPKGGGDEVGKSGVFEQVMEGLYFG---TKETVGCAAEMVKRNAVGPEDFRFFDGCCGW 254
GD + S ++ G+Y+G K ++E+++ P + RFF G GW
Sbjct: 76 HYLHNVGDLLEGS---VKISNGVYWGGDFEKLKFLISSELIE-----PHNIRFFLGYTGW 127
Query: 255 EKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+ QL EE+ G W +A + + ++ LW+E++
Sbjct: 128 GEGQLEEEMSTGSWVIADADANYL-FKTEPSELWQEIM 164
>gi|77163899|ref|YP_342424.1| hypothetical protein Noc_0368 [Nitrosococcus oceani ATCC 19707]
gi|254435978|ref|ZP_05049485.1| conserved hypothetical protein [Nitrosococcus oceani AFC27]
gi|119391979|sp|Q3JE52.1|Y368_NITOC RecName: Full=UPF0301 protein Noc_0368
gi|76882213|gb|ABA56894.1| Protein of unknown function DUF179 [Nitrosococcus oceani ATCC
19707]
gi|207089089|gb|EDZ66361.1| conserved hypothetical protein [Nitrosococcus oceani AFC27]
Length = 187
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 66/165 (40%), Gaps = 29/165 (17%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRS--TVLDAAGTFSD 182
LIA LD V+ F RTV I G GII+NRP +++ +M V D +
Sbjct: 11 FLIAMPALDDVN-FARTVTFICEHNQDGAMGIIINRPLSITLDQMLQHIKVKDCPQEVGE 69
Query: 183 RPLFFGGPL--EEGLFLVSPKGG-------GDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
P+F GGP+ E G L P G GDEVG + +++ + G
Sbjct: 70 MPVFLGGPIQQERGFVLHRPIGQWETTLRVGDEVGIT-TSRDILDAITQGK--------- 119
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GP G GW QL +E+ W + +V+
Sbjct: 120 -------GPPQTLIALGYAGWGPNQLEQELAENAWLSTPANSTVV 157
>gi|375146996|ref|YP_005009437.1| hypothetical protein [Niastella koreensis GR20-10]
gi|361061042|gb|AEW00034.1| protein of unknown function DUF179 [Niastella koreensis GR20-10]
Length = 171
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 15/175 (8%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
H + G +LI+ L+ + F++ VI I G G ++N+ + E + L
Sbjct: 4 HPLKAGSVLISAPSLEDPY-FDKVVIYITEYNEKGALGFVMNQ-----VFERKFNELTEF 57
Query: 178 GTFSDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
T PL+ GGP++ E L+ + G G V +G+Y G A + +
Sbjct: 58 RTSKPFPLYEGGPVDREKLYFIHRIPGSISEGT-----LVADGVYMGG--NFKQAVQYLN 110
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEEL 291
+ R F G GW+ +L E+ G W S + + E+ LWEEL
Sbjct: 111 TTGDAERNLRLFIGYSGWDANELEAEVEEGSWLPVQASVTTL-FEASEQSLWEEL 164
>gi|423329126|ref|ZP_17306933.1| hypothetical protein HMPREF9711_02507 [Myroides odoratimimus CCUG
3837]
gi|404603526|gb|EKB03180.1| hypothetical protein HMPREF9711_02507 [Myroides odoratimimus CCUG
3837]
Length = 188
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEG-L 195
IF R+VIL+ G G ILN+P +++ ++ +A+ T D GGP+++ +
Sbjct: 25 IFSRSVILLTEHSQDGSVGFILNKPLDLTLSDLLPNT-EASFTIYD-----GGPVQKNRI 78
Query: 196 FLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
F + P+ D + +++ LY+G ++ + D RFF G G
Sbjct: 79 FYIHTRPELIPDSI-------HIVDDLYWGVD--FEELNNILSLGILNKNDIRFFLGYSG 129
Query: 254 WEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRR 298
W+ +QL EI+ +W + + LW+ L MG +
Sbjct: 130 WDCDQLKNEIQDNFWIASNKLDTKNIFSQSPTELWKNSLSKMGSK 174
>gi|329936539|ref|ZP_08286275.1| Putative transcriptional regulator [Streptomyces griseoaurantiacus
M045]
gi|329304054|gb|EGG47936.1| Putative transcriptional regulator [Streptomyces griseoaurantiacus
M045]
Length = 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 16/174 (9%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + FER V+L+L + G G++LNRP+ + + ++ + + AG D
Sbjct: 9 GRLLVATPALSDPN-FERAVVLLLDHDEEGSLGVVLNRPTPVDVGDI---LANWAGLAGD 64
Query: 183 RPLFF-GGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
+ F GGP L+ L + V P GG E G + +V + E A + +
Sbjct: 65 PGVVFQGGPVSLDSALGVAVIPGGGSGERTPLG-WRRVHGAIGLVDLE----APPELLAS 119
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
A+G R F G GW QL +E+ G W V P + S LW E+L
Sbjct: 120 ALG--SLRIFAGYAGWGPGQLEDELSEGAWYVVESEPGDVSSPSPET-LWREVL 170
>gi|391232102|ref|ZP_10268308.1| putative transcriptional regulator [Opitutaceae bacterium TAV1]
gi|391221763|gb|EIQ00184.1| putative transcriptional regulator [Opitutaceae bacterium TAV1]
Length = 186
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+A L + F RTV+L+ + G GI+LNRP S+ + A G +
Sbjct: 12 GSLLVAHPVLRDPN-FRRTVVLLSGHDGEGALGIVLNRPLRKSLGSLGGEF--ALGPLAH 68
Query: 183 RPLFFGGPLEEGLFLV---SPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
PLF GGP+ L+ + GGD G F+ L FG AAE+ +
Sbjct: 69 VPLFNGGPVAGRQVLLCAWRSQLGGDAEG----FQ-----LMFGIDPE--KAAELAGQPG 117
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLE 281
VG R F G GW QL +E+ W V+ S++ E
Sbjct: 118 VG---LRAFLGYAGWSAGQLEQELSQDTWVVSNLPASLMETE 156
>gi|375098311|ref|ZP_09744576.1| putative transcriptional regulator [Saccharomonospora marina XMU15]
gi|374659044|gb|EHR53877.1| putative transcriptional regulator [Saccharomonospora marina XMU15]
Length = 190
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 78/185 (42%), Gaps = 23/185 (12%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
E E G LL+A + + F RTV+ ++ G G++LNRPS + + E VL G
Sbjct: 6 EVEPGTLLVAAPTMFDPN-FRRTVVFVIDHRDEGTLGVVLNRPSDVPVDE----VLPNWG 60
Query: 179 TFSDRP--LFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE- 233
P +F GGP+E+ L L + + G GV G V A+
Sbjct: 61 EHVVEPQAVFVGGPVEKKTALCLAALRTGETAASVPGVIA------VRGPVALVDLDADP 114
Query: 234 --MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEEL 291
+V R R F G GW+ QL EI G W + PS + L + LW ++
Sbjct: 115 DSLVARV----RGLRVFAGYAGWDSGQLAGEIDRGDWLIVPALPSDV-LATPAKDLWGQV 169
Query: 292 LWLMG 296
L G
Sbjct: 170 LRRQG 174
>gi|317124439|ref|YP_004098551.1| hypothetical protein Intca_1307 [Intrasporangium calvum DSM 43043]
gi|315588527|gb|ADU47824.1| protein of unknown function DUF179 [Intrasporangium calvum DSM
43043]
Length = 186
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT ++G +F R+VIL+L + G G++LN+P + +VL
Sbjct: 8 GRLLVATPAVEG-DVFHRSVILVLHHDEAGAQGVVLNKPLAAEVD----SVLPGWQRVVT 62
Query: 183 RP--LFFGGPL--EEGLFLVSPKGGGDE-VGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
P LF GGP+ L LV+ G E +G +F + GL T AAE+
Sbjct: 63 APHVLFQGGPVSTSSALGLVTVPGDEPEPLGVKRLFGSI--GLVDLDVPTPVVAAELAG- 119
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270
R F G GWE QL EI G W V
Sbjct: 120 -------MRIFAGYAGWEASQLEGEILRGDWYV 145
>gi|395236304|ref|ZP_10414501.1| hypothetical protein A936_21532 [Enterobacter sp. Ag1]
gi|394728935|gb|EJF28955.1| hypothetical protein A936_21532 [Enterobacter sp. Ag1]
Length = 187
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F+R+V+ I G GII+N+P ++ ++ DA D+P+F GG
Sbjct: 18 LFKRSVVYICEYNDEGAMGIIINKPLENLQVDGVLEKLKIEPDPRDATIRL-DKPVFIGG 76
Query: 190 PLEE--GLFLVSPKGGGDEVGKS-GVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFR 246
PL E G L SP D G S + + + ET+G A + P++
Sbjct: 77 PLAEDRGFILHSPP---DNFGSSIRISDDTVITTSRDVLETLGTAKQ--------PKEVI 125
Query: 247 FFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G WEK QL +EI W A SP ++ + W E L+G
Sbjct: 126 VALGYASWEKGQLEQEIMENSWLTAPASPEIL-FHTPISERWREAARLIG 174
>gi|440747875|ref|ZP_20927130.1| transcriptional regulator, putative [Mariniradius saccharolyticus
AK6]
gi|436483617|gb|ELP39657.1| transcriptional regulator, putative [Mariniradius saccharolyticus
AK6]
Length = 189
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 12/177 (6%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P+ G LLI+ L + F R+VIL+ G G++LN+ S++ + S +LD A
Sbjct: 9 PKSGDLLISEPFLQDEN-FVRSVILVCENNENGSFGLVLNKQSILKL----SDLLDGA-D 62
Query: 180 FSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
F D ++ GGP+E+ G + E++ G G E + E +K+
Sbjct: 63 FLDAVVYVGGPVEQNTLHFIYHDSNPLPGSISLAEELWWG---GDFEVL---LERLKQGE 116
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
+ + +FF G GW QL+ E+ W V + + +W +L MG
Sbjct: 117 MLSDQVKFFIGYSGWAAGQLDNELEEDTWIVCTSADYAEIFDDSAEEMWRVILKNMG 173
>gi|428181854|gb|EKX50716.1| hypothetical protein GUITHDRAFT_161696 [Guillardia theta CCMP2712]
Length = 668
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 89/221 (40%), Gaps = 33/221 (14%)
Query: 70 ADWRSFRARLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDK-------WAHTIHEPEK 122
+DW +FR +L + Q + + N+ DK W + + E +
Sbjct: 74 SDWLTFREKL---------EEQYLTTGKEGKAGVKRLNNAADKAQTTSNVWKYDVGELVQ 124
Query: 123 GCLLIATEKLDGVHI---FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
L+ + H+ F ++++L+LS P GIILNRPS S + L G
Sbjct: 125 AGTLLFSINTHSPHVDQQFHKSLVLVLSHTPRYTQGIILNRPSQFSTEN--GWRLWHGGN 182
Query: 180 FSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
F P + +L K G+ + V ++++G+YF ++ A +V+
Sbjct: 183 IQG----FSAPRDLKHYLCLHKLDGEVAQR--VSAKIVDGVYF---TSLNSAESLVQAGH 233
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGY---WTVAACSPSV 277
EDF F G GW L ++ +G W +A+ S
Sbjct: 234 ARKEDFVVFLGYVGWASGDLEAQVDSGLNRNWFIASAGKST 274
>gi|375138974|ref|YP_004999623.1| putative transcriptional regulator [Mycobacterium rhodesiae NBB3]
gi|359819595|gb|AEV72408.1| putative transcriptional regulator [Mycobacterium rhodesiae NBB3]
Length = 201
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 23/182 (12%)
Query: 118 HEPEKGCLLIA-TEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
H G LL+A T+ L+ F R+VI I+ G G++LNRPS ++ VL
Sbjct: 16 HRVRAGTLLLANTDLLEPT--FRRSVIYIVEHNDGGTLGVVLNRPSETAVY----NVLPQ 69
Query: 177 AGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAA 232
+ +P +F GGP+ + L L + + G D G G+ G V A
Sbjct: 70 WAKLATKPKTMFIGGPVKRDAALCLATLRVGIDSAGMPGLRH------VQGRMAMVDLDA 123
Query: 233 EMVKRNAVGP--EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEE 290
+ + V P E R F G GW QL EI W V + PS + L LW
Sbjct: 124 D---PDTVAPAIEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDV-LSEPRADLWAR 179
Query: 291 LL 292
+L
Sbjct: 180 VL 181
>gi|157964096|ref|YP_001498920.1| hypothetical protein RMA_0049 [Rickettsia massiliae MTU5]
gi|166919101|sp|A8F0D7.1|Y049_RICM5 RecName: Full=UPF0301 protein RMA_0049
gi|157843872|gb|ABV84373.1| Putative transcriptional regulator [Rickettsia massiliae MTU5]
Length = 189
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 21/175 (12%)
Query: 109 LGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR-PSLMSIK 167
+GDK H + G L+AT + I+ +++I +LS G G+I NR + + +K
Sbjct: 1 MGDKIFHNL----SGKTLVATPHVITKGIYHKSLIYMLSHTEEGAIGLIFNRLVNHIDLK 56
Query: 168 EMRSTVLDAAGTFSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
D T P++ GGP+E +G FL S + + L F
Sbjct: 57 SFFKIKNDKITTPVMVPIYLGGPIEHEKGFFLHSSDYNKNLL------------LDFHND 104
Query: 226 ETVGCAAEMVKRNAVG--PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
V E+ + A G P++ F G W+ QL EE+ W V C+ I
Sbjct: 105 LAVSSNLEISEDIAFGKGPKNSLFIVGYTAWKPGQLEEELEKNLWLVMDCNKEFI 159
>gi|384083121|ref|ZP_09994296.1| hypothetical protein gproHI_07374 [gamma proteobacterium HIMB30]
Length = 195
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 16/161 (9%)
Query: 122 KGCLLIATEKL-DGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAA-G 178
G L++ L DGV F+ +++L+ G G I+N+P+ S++E+ + LDAA G
Sbjct: 17 NGQFLVSMPDLKDGV--FDSSLVLMCEHGETGAMGFIVNKPTEFSVQEIFEQLNLDAAEG 74
Query: 179 TFSDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
D P+ GGP+E + FL+S D+V +V++GL+ + V +A
Sbjct: 75 LDPDIPVMTGGPVEPQRGFLLSNHPITDDV------VEVLDGLFLASSPDVLPSA----I 124
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+A+ D F G GW + QL E+ A W VI
Sbjct: 125 DALNQGDAIFILGYSGWSEGQLESEMAANTWINVPWDADVI 165
>gi|383643910|ref|ZP_09956316.1| hypothetical protein SchaN1_17727 [Streptomyces chartreusis NRRL
12338]
Length = 190
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + + +L+ G +
Sbjct: 9 GRLLVATPALADPN-FDRAVVLLLDHDEEGSLGVVLNRPTPVDVND----ILEGWGDLAG 63
Query: 183 RP--LFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
P +F GGP L+ L + V P G E G + +V + E A +
Sbjct: 64 EPGVVFQGGPVSLDSALGVAVVPGGASGEAAPLG-WRRVHGAIGLVDLE----APPELLA 118
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+A+G R F G GW QL +E+ G W V P + S LW E+L
Sbjct: 119 SALG--SLRIFAGYAGWGPGQLEDELVDGAWYVVESEPGDVSSPSPER-LWREVL 170
>gi|34580997|ref|ZP_00142477.1| hypothetical protein [Rickettsia sibirica 246]
gi|383483393|ref|YP_005392306.1| hypothetical protein MC1_00300 [Rickettsia parkeri str. Portsmouth]
gi|28262382|gb|EAA25886.1| unknown [Rickettsia sibirica 246]
gi|378935747|gb|AFC74247.1| hypothetical protein MC1_00300 [Rickettsia parkeri str. Portsmouth]
Length = 189
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 21/175 (12%)
Query: 109 LGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR-PSLMSIK 167
+GDK H + G L+AT + I+ +++I +LS G G+I NR + + +K
Sbjct: 1 MGDKIFHNL----SGKTLVATPHVITKGIYHKSLIYMLSHTEEGAIGLIFNRLVNHIDLK 56
Query: 168 EMRSTVLDAAGTFSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
D T P++ GGP+E +G FL S + + L F
Sbjct: 57 SFFKIKNDKITTPVMVPIYLGGPVEHEKGFFLHSSDYNKNLL------------LDFHND 104
Query: 226 ETVGCAAEMVKRNAVG--PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
V E+ + A G P++ F G W+ QL EE+ W V C+ I
Sbjct: 105 LAVSSNLEISEDIAFGKGPKNSLFIVGYTAWKPGQLEEELETNLWLVMDCNKEFI 159
>gi|418462818|ref|ZP_13033856.1| hypothetical protein SZMC14600_17754 [Saccharomonospora azurea SZMC
14600]
gi|359735560|gb|EHK84518.1| hypothetical protein SZMC14600_17754 [Saccharomonospora azurea SZMC
14600]
Length = 193
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 73/182 (40%), Gaps = 17/182 (9%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
E E G LL+A L + F RTV+ ++ G G++LNRPS +++ E VL G
Sbjct: 9 EVEPGTLLVAAPTLSDPN-FRRTVVFVIDHRDEGTLGVVLNRPSEVAVHE----VLPHWG 63
Query: 179 TFSDRP--LFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
P +F GGP+E+ L L + + G GV A
Sbjct: 64 DHVAEPASVFVGGPVEKKTALCLAALRTGETAATVPGVIAVRGPVALVDLDSDPDLLAAK 123
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWL 294
V+ R F G GW+ QL EI G W + P + L + LW +L
Sbjct: 124 VR-------GLRVFAGYAGWDAGQLAGEIDRGDWLIVPALPGDV-LATPMRDLWGHVLRR 175
Query: 295 MG 296
G
Sbjct: 176 QG 177
>gi|381163809|ref|ZP_09873039.1| putative transcriptional regulator [Saccharomonospora azurea
NA-128]
gi|379255714|gb|EHY89640.1| putative transcriptional regulator [Saccharomonospora azurea
NA-128]
Length = 193
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 73/182 (40%), Gaps = 17/182 (9%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
E E G LL+A L + F RTV+ ++ G G++LNRPS +++ E VL G
Sbjct: 9 EVEPGTLLVAAPTLSDPN-FRRTVVFVIDHRDEGTLGVVLNRPSEVAVHE----VLPHWG 63
Query: 179 TFSDRP--LFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
P +F GGP+E+ L L + + G GV A
Sbjct: 64 DHVAEPASVFVGGPVEKKTALCLAALRTGETAATVPGVIAVRGPVALVDLDSDPDLLAAK 123
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWL 294
V+ R F G GW+ QL EI G W + P + L + LW +L
Sbjct: 124 VR-------GLRVFAGYAGWDPGQLAGEIDRGDWLIVPALPGDV-LATPMRDLWGHVLRR 175
Query: 295 MG 296
G
Sbjct: 176 QG 177
>gi|15891966|ref|NP_359680.1| hypothetical protein RC0043 [Rickettsia conorii str. Malish 7]
gi|341583269|ref|YP_004763760.1| hypothetical protein Rh054_00265 [Rickettsia heilongjiangensis 054]
gi|374318804|ref|YP_005065302.1| Putative transcriptional regulator [Rickettsia slovaca 13-B]
gi|383750691|ref|YP_005425792.1| hypothetical protein MC3_00285 [Rickettsia slovaca str. D-CWPP]
gi|46577530|sp|Q92JM4.1|Y043_RICCN RecName: Full=UPF0301 protein RC0043
gi|15619078|gb|AAL02581.1| unknown [Rickettsia conorii str. Malish 7]
gi|340807495|gb|AEK74083.1| hypothetical protein Rh054_00265 [Rickettsia heilongjiangensis 054]
gi|360041352|gb|AEV91734.1| Putative transcriptional regulator [Rickettsia slovaca 13-B]
gi|379773705|gb|AFD19061.1| hypothetical protein MC3_00285 [Rickettsia slovaca str. D-CWPP]
Length = 189
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 21/175 (12%)
Query: 109 LGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR-PSLMSIK 167
+GDK H + G L+AT + I+ +++I +LS G G+I NR + + +K
Sbjct: 1 MGDKIFHNL----SGKTLVATPHVITKGIYHKSLIYMLSHTEEGAIGLIFNRLVNHIDLK 56
Query: 168 EMRSTVLDAAGTFSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
D T P++ GGP+E +G FL S + + L F
Sbjct: 57 SFFKIKNDEITTPVMVPIYLGGPVEHEKGFFLHSSDYNKNLL------------LDFHND 104
Query: 226 ETVGCAAEMVKRNAVG--PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
V E+ + A G P++ F G W+ QL EE+ W V C+ I
Sbjct: 105 LAVSSNLEISEDIAFGKGPKNSLFIVGYTAWKPGQLEEELETNLWLVMDCNKEFI 159
>gi|410624659|ref|ZP_11335454.1| hypothetical protein GPAL_3989 [Glaciecola pallidula DSM 14239 =
ACAM 615]
gi|410155740|dbj|GAC30828.1| hypothetical protein GPAL_3989 [Glaciecola pallidula DSM 14239 =
ACAM 615]
Length = 208
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 18/169 (10%)
Query: 106 QNSLGDKWAHTIHEPEKGCLLIATEKL-DGVHIFERTVILILSMEPMGPSGIILNRPSLM 164
++S+ D + + K LL+A L DG FERTVI + G GI++N PS M
Sbjct: 12 EDSVEDSLENKLENGLKNQLLVAMPSLEDG--FFERTVIYVCEHNTEGAMGIVINLPSTM 69
Query: 165 SIKEMRSTVLDAA---GTFSDRPLFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEG 219
+ +E+ S + A S + + GGP+ + G L G + G S
Sbjct: 70 TFRELISQADEHAIVEDNKSQQIVLCGGPMHQDRGFIL-----HGSQAGWSSSVALTPAI 124
Query: 220 LYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYW 268
+ +K+ + V N +GPE G GWE QL +E++ W
Sbjct: 125 MVTTSKDILA-----VIGNDLGPEKALIALGHAGWEPGQLEQELKENVW 168
>gi|383480941|ref|YP_005389856.1| hypothetical protein MCC_00450 [Rickettsia rhipicephali str.
3-7-female6-CWPP]
gi|378933280|gb|AFC71783.1| hypothetical protein MCC_00450 [Rickettsia rhipicephali str.
3-7-female6-CWPP]
Length = 189
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 21/175 (12%)
Query: 109 LGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR-PSLMSIK 167
+GDK H + G L+AT + I+ +++I +LS G G+I NR + + +K
Sbjct: 1 MGDKIFHNL----SGKTLVATPHVITKGIYHKSLIYMLSHTEEGAIGLIFNRLVNHIDLK 56
Query: 168 EMRSTVLDAAGTFSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
D T P++ GGP+E +G FL S + + L F
Sbjct: 57 SFFKIKNDEITTPVMVPIYLGGPVEHEKGFFLHSSDYNKNLL------------LDFHND 104
Query: 226 ETVGCAAEMVKRNAVG--PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
V E+ + A G P++ F G W+ QL EE+ W V C+ I
Sbjct: 105 LAVSSNLEISEDIAFGKGPKNSLFIVGYTAWKPGQLEEELEKNLWLVMDCNKEFI 159
>gi|383482861|ref|YP_005391775.1| hypothetical protein MCI_04380 [Rickettsia montanensis str. OSU
85-930]
gi|402702842|ref|ZP_10850821.1| hypothetical protein RhelC_00425 [Rickettsia helvetica C9P9]
gi|378935215|gb|AFC73716.1| hypothetical protein MCI_04380 [Rickettsia montanensis str. OSU
85-930]
Length = 189
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 21/175 (12%)
Query: 109 LGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR-PSLMSIK 167
+GDK H + G L+AT + I+ +++I +LS G G+I NR + + +K
Sbjct: 1 MGDKIFHNL----SGKTLVATPHVITKGIYHKSLIYMLSHTEEGAIGLIFNRLVNHIDLK 56
Query: 168 EMRSTVLDAAGTFSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
D T P++ GGP+E +G FL S + + L F
Sbjct: 57 SFFKIKNDEITTPVMVPIYLGGPVEHEKGFFLHSSDYNKNLL------------LDFHND 104
Query: 226 ETVGCAAEMVKRNAVG--PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
V E+ + A G P++ F G W+ QL EE+ W V C+ I
Sbjct: 105 LAVSSNLEISEDIAFGKGPKNSLFIVGYTAWKPGQLEEELEKNLWLVMDCNKEFI 159
>gi|373108465|ref|ZP_09522747.1| hypothetical protein HMPREF9712_00340 [Myroides odoratimimus CCUG
10230]
gi|423133577|ref|ZP_17121224.1| hypothetical protein HMPREF9715_00999 [Myroides odoratimimus CIP
101113]
gi|371646582|gb|EHO12093.1| hypothetical protein HMPREF9712_00340 [Myroides odoratimimus CCUG
10230]
gi|371648436|gb|EHO13925.1| hypothetical protein HMPREF9715_00999 [Myroides odoratimimus CIP
101113]
Length = 188
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 19/182 (10%)
Query: 121 EKGCLLIAT-EKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
++G LI+ L+ IF R+VIL+ G G ILN+P +++ ++ +A+ T
Sbjct: 8 QRGDQLISLPSALNADLIFSRSVILLTEHSQDGSVGFILNKPLDLTLSDLLPNT-EASFT 66
Query: 180 FSDRPLFFGGPLEEG-LFLV--SPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
D GGP+++ +F + P+ D + +++ LY+G ++
Sbjct: 67 IYD-----GGPVQKNRIFYIHTRPELIPDSI-------HIVDDLYWGVD--FEELNNILS 112
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
+ D RFF G GW+ +QL EI+ +W + + LW+ L +G
Sbjct: 113 LGILNKNDIRFFLGYSGWDCDQLKNEIQDNFWIASNKLDTKNIFSQSPTELWKSSLSKLG 172
Query: 297 RR 298
+
Sbjct: 173 NK 174
>gi|271963248|ref|YP_003337444.1| hypothetical protein [Streptosporangium roseum DSM 43021]
gi|270506423|gb|ACZ84701.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
Length = 192
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPS-GIILNRPSLMSIKEMRSTVLDAAGTFS 181
G LL+AT +LD + F R+V+L+L + G + G++LNRPS +S+ ++ T DA T
Sbjct: 8 GGLLVATPQLDDPN-FRRSVVLVLEHDLDGGTLGVVLNRPSDISVTQVLPT-WDAMVT-G 64
Query: 182 DRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
LF GGP++ L L + G + +G + GT + + A
Sbjct: 65 PPVLFQGGPVQTDSALALAAVPSGQEPLGWRRLHAGTAAVSRLGTVDLDAPPEILAGEIA 124
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
R F G GW QL EI G W + P
Sbjct: 125 ----QMRIFAGYAGWTAGQLEAEIGEGAWYIVDAEP 156
>gi|29831672|ref|NP_826306.1| hypothetical protein SAV_5129 [Streptomyces avermitilis MA-4680]
gi|46577429|sp|Q82D55.1|Y5129_STRAW RecName: Full=UPF0301 protein SAV_5129
gi|29608788|dbj|BAC72841.1| hypothetical protein SAV_5129 [Streptomyces avermitilis MA-4680]
Length = 193
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + ++ D AG
Sbjct: 12 GRLLVATPALADPN-FDRAVVLLLDHDEEGSLGVVLNRPTPVDVSDILEGWADLAGEPG- 69
Query: 183 RPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
+F GGP L+ L + GG G + +V + E E++ + A+
Sbjct: 70 -VVFQGGPVSLDSALGVAVIPGGASVDGAPLGWRRVHGAIGLVDLE---APPELLAK-AL 124
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
G R F G GW QL +E+ G W V P + S LW E+L
Sbjct: 125 G--SLRIFAGYAGWGPGQLEDELVEGAWYVVESEPGDVSSPSPER-LWREVL 173
>gi|284041561|ref|YP_003391901.1| hypothetical protein Cwoe_0090 [Conexibacter woesei DSM 14684]
gi|283945782|gb|ADB48526.1| protein of unknown function DUF179 [Conexibacter woesei DSM 14684]
Length = 182
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 14/171 (8%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
KG LL+A+ L + F RTV+LI G G++LNRP+ ++ E S +
Sbjct: 6 KGKLLLASPALQDPN-FARTVVLIAEHNEDGAMGLVLNRPATTTVAE--SAPELEELVEA 62
Query: 182 DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ P++ GGP++ +V +E +G+ V + + F + E + R
Sbjct: 63 EEPIYIGGPVQPSAVIV--LAAFEEPAAAGLL--VRDDVGFLSAEADFATSRDATRQ--- 115
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
R F G GW QL+EE+ W V P + E LW ++L
Sbjct: 116 ---LRVFAGHAGWGPGQLDEELEREDWIVEPPLPQELFSEDAE-ELWGDVL 162
>gi|372272864|ref|ZP_09508912.1| hypothetical protein MstaS_17364 [Marinobacterium stanieri S30]
Length = 190
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 12/145 (8%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRS--TVLDAAGTFSDRPLFFGGPLEE-- 193
F TV+ + G GI++N+PS + + ++ + G +S RP+F GGP+ +
Sbjct: 24 FAETVVYLCDHSEYGAMGIVVNKPSGIRMCDLLDHLELEHQPGLYSGRPVFNGGPVRDDR 83
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
G L P+ G + + + ++ L T + E + R+ GP+ F G G
Sbjct: 84 GFVLHQPQPGQEWLSSHSINDE----LCLTTSIDI---LEAIARDQ-GPDTFLVALGYAG 135
Query: 254 WEKEQLNEEIRAGYWTVAACSPSVI 278
W EQL +E+R W + ++
Sbjct: 136 WGPEQLEQELRDNLWLSCPANSDIL 160
>gi|223937921|ref|ZP_03629820.1| protein of unknown function DUF179 [bacterium Ellin514]
gi|223893322|gb|EEF59784.1| protein of unknown function DUF179 [bacterium Ellin514]
Length = 186
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 13/171 (7%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
KG LL+ + +L G F+RTV+L+ + G G++LNR S + EM + D +
Sbjct: 9 KGQLLLDSGQLSG-SFFQRTVVLVCQHDAEGALGLVLNRDSGNKLGEM--VLADLPEQLT 65
Query: 182 DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
D L+ GGP++ L +S + ++ V V G T +G + KR
Sbjct: 66 DNALYLGGPVQ--LSALSYLYSDTYLPEASVLPNVELGHSLETLVELGESFSPGKR---- 119
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+ F G GW QL EE++ W + ++ ++ LW+ +L
Sbjct: 120 ---IKLFAGYAGWSPGQLEEEMKRKAWLTHPATVDLV-FDTDPDDLWQYVL 166
>gi|374989318|ref|YP_004964813.1| hypothetical protein SBI_06562 [Streptomyces bingchenggensis BCW-1]
gi|297159970|gb|ADI09682.1| hypothetical protein SBI_06562 [Streptomyces bingchenggensis BCW-1]
Length = 219
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + + +L++ +
Sbjct: 27 GRLLVATPALADPN-FDRAVVLLLDHDEEGSLGVVLNRPTPVGVGD----ILESWAALAG 81
Query: 183 RP--LFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGC-------A 231
P +F GGP L+ L + G ++G E G + G A
Sbjct: 82 EPGVVFQGGPVSLDSALGVAVVPGEAGRASEAGRVSSRTEDGPLGWRRVHGAIGLVDLEA 141
Query: 232 AEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
+ AVG R F G GW QL +E+ G W V P
Sbjct: 142 PPELLAAAVG--SLRIFAGYAGWGPGQLEDELSEGAWYVVESEP 183
>gi|410101163|ref|ZP_11296114.1| hypothetical protein HMPREF1076_05292 [Parabacteroides goldsteinii
CL02T12C30]
gi|409213139|gb|EKN06165.1| hypothetical protein HMPREF1076_05292 [Parabacteroides goldsteinii
CL02T12C30]
Length = 198
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 17/188 (9%)
Query: 112 KWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRS 171
K H P +G +LI+ L + F+R+V+L++ G G +LN+ + + + +
Sbjct: 9 KITHNNLLPAQGSILISEPFLQDAY-FQRSVVLLVEHNTQGSMGFVLNKKTDLIV----N 63
Query: 172 TVLDAAGTFSDRPLFFGGPLEEG-LFLVSPKGGGDEVGKSGVFEQVMEGLYF-GTKETVG 229
T + + P++ GGP+ LF + G D + V ++ + LYF G E
Sbjct: 64 TFFPELEEYPEIPIYLGGPVSANRLFFIHSLG--DLIVPDSV--KIKDRLYFDGDFE--- 116
Query: 230 CAAEMVKRNAVGPE-DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW 288
A + +N E +FF G GW + QL EI W V+ + + L G W
Sbjct: 117 -ALKRYMQNGHSIEGKVKFFLGYSGWTEGQLGNEINKNSWVVSHAAKENVLLADGE-SFW 174
Query: 289 EELLWLMG 296
+ L +G
Sbjct: 175 KNSLEQLG 182
>gi|363419934|ref|ZP_09308031.1| hypothetical protein AK37_04433 [Rhodococcus pyridinivorans AK37]
gi|359736606|gb|EHK85549.1| hypothetical protein AK37_04433 [Rhodococcus pyridinivorans AK37]
Length = 202
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 75/191 (39%), Gaps = 17/191 (8%)
Query: 106 QNSLGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMS 165
Q+ D+ A + G LL++ L F RTV+ I+ G G++LNR S S
Sbjct: 5 QDEPEDRTAPSTPRVRAGSLLVSATDLTE-PTFRRTVVYIIEHTDAGSFGVVLNRISDTS 63
Query: 166 IKEMRSTVLDAAGTFSDRP--LFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLY 221
+ M L + P LF GGP+ L L + + G D G+ +
Sbjct: 64 VDAM----LPQWSWLAAEPKTLFVGGPVHRSSALCLGTLRVGADITDVPGIRHVDGRVVM 119
Query: 222 FGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLE 281
G A V E R F G GW QL+ E+R W V + P+ + L
Sbjct: 120 IDLDVDPGHIAHYV-------EGVRIFAGYAGWSAGQLDGELRNDDWMVVSALPTDV-LA 171
Query: 282 SGTLGLWEELL 292
L +W +L
Sbjct: 172 PAHLDVWARVL 182
>gi|325185084|emb|CCA19576.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 342
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 75/183 (40%), Gaps = 26/183 (14%)
Query: 123 GCLLIATEKLDGVHIFERTVILIL--SMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
G L+A L+G IF R+VILI S+E G G+I+N + S+ LD + F
Sbjct: 157 GTFLLAHPLLNG--IFSRSVILITQHSLE-RGTRGLIVNLATSDSVARTFKVSLDVSSAF 213
Query: 181 SDRPLFFGGPL----EEGLFLVSPKGGGD----EVGKSGVFEQVMEGLYFGTKETVGCAA 232
+F GGP+ E L S GG D E G + Q+ Y+G V
Sbjct: 214 GSNSVFCGGPVAIRHAEFLHRNSDVGGIDVNSEETGGNAESSQI----YWGGDLEVAARV 269
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+ +R FF G W QL E+R G W + +P L + E L
Sbjct: 270 SIKERGKAN--QVVFFKGVSVWIAGQLENELRQGTW-IPVVAPVSAALNA------ERRL 320
Query: 293 WLM 295
W M
Sbjct: 321 WSM 323
>gi|297200044|ref|ZP_06917441.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197710517|gb|EDY54551.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 193
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + ++ D AG
Sbjct: 12 GRLLVATPALADPN-FDRAVVLLLDHDEEGSLGVVLNRPTPVDVGDILEGWADLAGEPG- 69
Query: 183 RPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
+F GGP L+ L + GGG G + +V + E A + +A+
Sbjct: 70 -VVFQGGPVSLDSALGVAVIPGGGAVDGAPLGWRRVHGAIGLVDLE----APPELLASAL 124
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
G R F G GW QL +E+ G W V P + + LW E+L
Sbjct: 125 G--SLRIFAGYAGWGPGQLEDELVEGAWYVVESEPGDVSSPAPER-LWREVL 173
>gi|407981368|ref|ZP_11162070.1| hypothetical protein C731_0012 [Mycobacterium hassiacum DSM 44199]
gi|407377032|gb|EKF25946.1| hypothetical protein C731_0012 [Mycobacterium hassiacum DSM 44199]
Length = 201
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 82/196 (41%), Gaps = 23/196 (11%)
Query: 111 DKWAHTIHEPEKGCLLIA-TEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM 169
D A H G LL+A T+ L+ F RTVI I+ G G+ILNRPS ++
Sbjct: 9 DFIAPAAHRVRAGTLLLANTDLLEPT--FRRTVIYIVEHNEGGTLGVILNRPSETAVY-- 64
Query: 170 RSTVLDAAGTFSDRP--LFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKET 227
VL + +P +F GGP++ L + + GV + G+
Sbjct: 65 --NVLPHWAKLAAKPKTMFIGGPVKRDAALCL------GLVRVGVDPSALPGIRHVQGRV 116
Query: 228 VGCAAEMVKRNAVGP--EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTL 285
V + +A+ P E R F G GW QL EI W V + PS + +E +
Sbjct: 117 VMVDLD-ADPDALAPALEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVEP-RV 174
Query: 286 GLWEELLWLMGRRKVW 301
LW L RR+ W
Sbjct: 175 DLWGRAL----RRQPW 186
>gi|393783912|ref|ZP_10372081.1| UPF0301 protein [Bacteroides salyersiae CL02T12C01]
gi|392667571|gb|EIY61078.1| UPF0301 protein [Bacteroides salyersiae CL02T12C01]
Length = 197
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 120 PEKGCLLIATEKL-DGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
P +G +LI+ L D F R+V+L++ G G+I+N+ + + + V+
Sbjct: 18 PSRGKILISEPFLCDAT--FGRSVVLLVDHTSEGSMGLIMNK----QLPLLVNDVVKEFK 71
Query: 179 TFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQ------VMEGLYFGTKETVGCAA 232
D PL+ GGP+ G D + Q V GLY +
Sbjct: 72 YLEDIPLYKGGPI-----------GTDTLFYLHTLSQLPGALPVSNGLYL-NGDFDALKK 119
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+++ N + + RFF G GWE EQL +EI+ W +A PS + L+ +W+ L
Sbjct: 120 HILQGNEINGK-VRFFLGYSGWECEQLIQEIKENTWIIAKEDPSYL-LDGEVKDMWKNAL 177
Query: 293 WLMGRR 298
+G +
Sbjct: 178 GKLGSK 183
>gi|254446757|ref|ZP_05060232.1| conserved hypothetical protein [Verrucomicrobiae bacterium DG1235]
gi|198256182|gb|EDY80491.1| conserved hypothetical protein [Verrucomicrobiae bacterium DG1235]
Length = 187
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 18/174 (10%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P G LL+A L + F +V+L+ E G G++LN+ + + ++ S D
Sbjct: 11 PLTGSLLLAHPHLKDPN-FASSVVLLTRHEESGSLGVVLNKGTGERLGQLSSEFADCG-- 67
Query: 180 FSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+ P++ GGP+ + +++ + + G F+ LYFG + V + +
Sbjct: 68 LGEVPVYLGGPVNQNQIILA---AWKLIPEKGQFQ-----LYFGMEPLVAQS-----KME 114
Query: 240 VGPE-DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
P+ +FR F G GW + QL E+ W V+ I + G+ LW L+
Sbjct: 115 TDPDLEFRAFKGYSGWSEGQLVGELEDNAWVVSEVDAESISTKEGS-DLWRHLI 167
>gi|407717408|ref|YP_006838688.1| hypothetical protein Q91_2152 [Cycloclasticus sp. P1]
gi|407257744|gb|AFT68185.1| hypothetical protein Q91_2152 [Cycloclasticus sp. P1]
Length = 187
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 15/158 (9%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSD 182
LIA ++G F ++V + + G GI++N+P M++K + + ++ +
Sbjct: 11 FLIAMPGMEGDD-FSKSVTYLCQHDEEGALGIVINKPHTMTMKAIFDQLSITAVNPAVAA 69
Query: 183 RPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
PLF GGP+ E G L +P G D E +K+ + AE
Sbjct: 70 TPLFMGGPVQPERGFVLHTPVGNWDST-----LTVNDEFALTSSKDILEAIAE-----GK 119
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GPE + G GW QL +EI+ W P +I
Sbjct: 120 GPEKWMVALGYAGWAAGQLEQEIQRNSWLHGQAEPHII 157
>gi|110598542|ref|ZP_01386811.1| Protein of unknown function DUF179 [Chlorobium ferrooxidans DSM
13031]
gi|110339846|gb|EAT58352.1| Protein of unknown function DUF179 [Chlorobium ferrooxidans DSM
13031]
Length = 187
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 23/169 (13%)
Query: 117 IHEPEK---GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV 173
++E EK G LL+A+ L F+RTV+L+ G G ILNRP M V
Sbjct: 2 VNEFEKLKAGKLLLASANLLESS-FKRTVLLMCEHNEKGSLGFILNRP-------MEFKV 53
Query: 174 LDAAGTFSD--RPLFFGGPLEEGL--FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVG 229
+A F D L GGP++ FL S GD + S +++ GL++G +
Sbjct: 54 CEAIAGFEDIEELLHMGGPVQVDTVHFLHSR---GDLIEDS---LEILPGLFWGGDKNE- 106
Query: 230 CAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ ++ + P + RFF G GW QL E G W A S +I
Sbjct: 107 -LSYLLNTGIMMPSEIRFFLGYAGWTAGQLEAEFDEGSWYTADASKELI 154
>gi|229586263|ref|YP_002844764.1| hypothetical protein RAF_ORF0041 [Rickettsia africae ESF-5]
gi|259491964|sp|C3PM61.1|Y041_RICAE RecName: Full=UPF0301 protein RAF_ORF0041
gi|228021313|gb|ACP53021.1| Putative transcriptional regulator [Rickettsia africae ESF-5]
Length = 189
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 21/175 (12%)
Query: 109 LGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR-PSLMSIK 167
+GDK H + G L+AT + I+ +++I +LS G G+I NR + + +K
Sbjct: 1 MGDKIFHNL----SGKTLVATPHVITKGIYHKSLIYMLSHTKEGAIGLIFNRLVNHIDLK 56
Query: 168 EMRSTVLDAAGTFSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
D T P++ GGP+E +G FL S + + L F
Sbjct: 57 SFFKIKNDKITTPVMVPIYLGGPVEHEKGFFLHSSDYNKNLL------------LDFHND 104
Query: 226 ETVGCAAEMVKRNAVG--PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
V E+ + A G P+ F G W+ QL EE+ W V C+ I
Sbjct: 105 LAVSSNLEISEDIAFGKGPKHSLFIVGYTAWKPGQLEEELETNLWLVMDCNKEFI 159
>gi|145634696|ref|ZP_01790405.1| hypothetical protein CGSHiAA_05706 [Haemophilus influenzae PittAA]
gi|145268241|gb|EDK08236.1| hypothetical protein CGSHiAA_05706 [Haemophilus influenzae PittAA]
Length = 186
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAG 178
+G LIA LD F R+V+ + G G+++N+P+ +SI E+ S + +
Sbjct: 5 QGKFLIAMPHLDDY--FNRSVVFMCEHNEQGSMGLVINQPTDLSIAELYSKLNFMMKNDR 62
Query: 179 TFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE-TVGCAAEMV 235
TF + + GGP+ E G L F+ Y T+E ++ +A++V
Sbjct: 63 TFGNEMVVAGGPVHTERGFIL--------HKNTLNAFQHT----YKVTEELSMTTSADVV 110
Query: 236 KR--NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ + PE + GC W QL +EIR W V + + ++
Sbjct: 111 ETLGSTFAPEKYLVALGCSSWGAGQLEKEIRDNAWLVVSSNDQIL 155
>gi|383500985|ref|YP_005414344.1| hypothetical protein MC5_00365 [Rickettsia australis str. Cutlack]
gi|378931996|gb|AFC70501.1| hypothetical protein MC5_00365 [Rickettsia australis str. Cutlack]
Length = 189
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 21/175 (12%)
Query: 109 LGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR-PSLMSIK 167
+GDK H + G L+AT + I+ +++I +LS G G+I NR + + +K
Sbjct: 1 MGDKIFHNL----SGKTLVATPHVITKGIYHKSLIYMLSHTEEGAIGLIFNRLVNHIDLK 56
Query: 168 EMRSTVLDAAGTFSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
D T P++ GGP+E +G FL S + + L F
Sbjct: 57 SFFKIKNDDITTPVMVPIYLGGPVEHEKGFFLHSSDYNKNLL------------LDFQND 104
Query: 226 ETVGCAAEMVKRNAVG--PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
V E+ + A G P++ F G W+ QL EE+ W V C+ I
Sbjct: 105 LAVSSNLEISEDIAFGKGPKNSLFIVGYTAWKPGQLEEELEKNLWLVMDCNKEFI 159
>gi|255559778|ref|XP_002520908.1| hypothetical protein RCOM_0808030 [Ricinus communis]
gi|223539874|gb|EEF41453.1| hypothetical protein RCOM_0808030 [Ricinus communis]
Length = 256
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGP-SGIILNRPSLMSIKEMRSTVLDAA-GTF 180
G +L+ATEKL + F+ ++ILI+ + G+I N+P I+ LD
Sbjct: 104 GSILVATEKLT-MQPFDNSMILIVKEDQNTRFKGLIYNKP----IRWESLENLDQGFELL 158
Query: 181 SDRPLFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+ PL FGGPL + G+ LV+ E + +V G+YF + E +K
Sbjct: 159 KEAPLSFGGPLIKRGMPLVALTRRAVE----DQYPEVAPGIYFLDQPATLQEIEQLKLGN 214
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACS 274
D+ FF G W +QL +EI G W + S
Sbjct: 215 QSITDYWFFLGFSSWGWDQLFDEIAEGAWNIIVNS 249
>gi|444429907|ref|ZP_21225086.1| hypothetical protein GS4_05_00150 [Gordonia soli NBRC 108243]
gi|443888912|dbj|GAC66807.1| hypothetical protein GS4_05_00150 [Gordonia soli NBRC 108243]
Length = 221
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 78/181 (43%), Gaps = 17/181 (9%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LLI++ L F RTVI ++ G G+ILNR S ++ + D A S
Sbjct: 41 GTLLISSTDL-VEPTFARTVIYVIEHNDGGSLGVILNRMSHTAVHNLLPQWSDLAA--SP 97
Query: 183 RPLFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
R LF GGP+++ L L K G D G + + A+++
Sbjct: 98 RALFVGGPVKQDAALCLGVLKLGADVDGVEALRPVDGRVVLVDLDADPEALAQVL----- 152
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRRKV 300
+ R F G GW QL+ E+ W +A+ PS + L T LW ++L RR+
Sbjct: 153 --DGVRLFAGYSGWGIGQLDGELDQDSWMLASALPSDL-LAPPTADLWSDVL----RRQP 205
Query: 301 W 301
W
Sbjct: 206 W 206
>gi|226362862|ref|YP_002780642.1| hypothetical protein ROP_34500 [Rhodococcus opacus B4]
gi|254801678|sp|C1B7P4.1|Y3450_RHOOB RecName: Full=UPF0301 protein ROP_34500
gi|226241349|dbj|BAH51697.1| hypothetical protein [Rhodococcus opacus B4]
Length = 201
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 17/186 (9%)
Query: 111 DKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMR 170
D+ A T G LL+++ L F RTVI ++ G G+++NRPS ++ +
Sbjct: 9 DRTASTEPVVRPGSLLVSSTDLVE-PAFRRTVIYVIEHNEAGSLGVVINRPSETAVHD-- 65
Query: 171 STVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE 226
VL + RP L+ GGP+ + L L + + G G G+ +
Sbjct: 66 --VLPQWAPLTARPSALYVGGPVKRDAALCLATLRTGAQADGVRGLRRVHGRVVMVDLDS 123
Query: 227 TVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLG 286
A +V E R F G GW QL+ E++ W V + S + L +
Sbjct: 124 DPEVVAPLV-------EGVRIFAGYSGWTYGQLDSELQRDDWIVISALASDV-LAPARVD 175
Query: 287 LWEELL 292
+W ++L
Sbjct: 176 VWAQVL 181
>gi|359423509|ref|ZP_09214643.1| hypothetical protein GOAMR_15_00070 [Gordonia amarae NBRC 15530]
gi|358241157|dbj|GAB04225.1| hypothetical protein GOAMR_15_00070 [Gordonia amarae NBRC 15530]
Length = 212
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LLIA+ L F R+VI ++ G G+I+N+ S ++ + D AG S
Sbjct: 32 GSLLIASTDLI-EPTFRRSVIYMMEHNGAGSLGVIINQMSQAAVHNLLPQWTDLAG--SP 88
Query: 183 RPLFFGGPLEEG----LFLVSPKGGGD-EVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
R LF GGP++ L ++ P D E+G V +V+ E + E V
Sbjct: 89 RALFVGGPVKPDAALCLGILKPGMSDDEELGMRPVDGRVVLIDLDADPELLADQVEGV-- 146
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGR 297
R F G GW QL E+ G W VA+ P I L LW +L R
Sbjct: 147 --------RIFAGYAGWGPGQLESELADGSWLVASALPGDI-LAPPAADLWFSVL----R 193
Query: 298 RKVW 301
R+ W
Sbjct: 194 RQPW 197
>gi|145631447|ref|ZP_01787217.1| hypothetical protein CGSHi22421_06332 [Haemophilus influenzae
R3021]
gi|144982984|gb|EDJ90493.1| hypothetical protein CGSHi22421_06332 [Haemophilus influenzae
R3021]
Length = 186
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 22/165 (13%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAG 178
+G LIA LD F RTV+ + G G+++N+P+ +SI E+ S + +
Sbjct: 5 QGKFLIAMPHLDDY--FNRTVVFMCEHNEQGSMGLVINQPTDLSIAELYSKLNFMMKNDR 62
Query: 179 TFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE-TVGCAAEMV 235
TF + + GGP+ E G L F+ Y T+E ++ +A++V
Sbjct: 63 TFGNEMVVAGGPVHTERGFIL--------HKNTLNAFQHT----YKVTEELSMTTSADVV 110
Query: 236 KR--NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ + PE + GC W QL +EI W VA+ ++
Sbjct: 111 ETLGSTFAPEKYLVALGCSSWGAGQLEKEISDNAWLVASSKDQIL 155
>gi|302551773|ref|ZP_07304115.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
40736]
gi|302469391|gb|EFL32484.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
40736]
Length = 193
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + + +L+ G +
Sbjct: 12 GRLLVATPALADPN-FDRAVVLLLDHDEEGSLGVVLNRPTPVDVDD----ILEGWGDLAG 66
Query: 183 RP--LFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
P +F GGP L+ L + V P G E G + +V + E A +
Sbjct: 67 EPGVVFQGGPVSLDSALGVGVVPGGALGEAAPLG-WRRVHGAIGLVDLE----APPELLA 121
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+A+G R F G GW QL EE+ G W V P + S LW E+L
Sbjct: 122 SALG--SLRIFAGYAGWGPGQLEEELVDGAWYVVESEPGDVSCPSPER-LWREVL 173
>gi|284007791|emb|CBA73647.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 187
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 21/168 (12%)
Query: 138 FERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGGP 190
F+++V+ I G G+++NRP S++ +++T D S +P+F GGP
Sbjct: 19 FQKSVVYICEHNEKGAMGLVINRPIEQISINSILKNLNIKTTEYDHITELS-QPVFSGGP 77
Query: 191 LEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFF 248
+ E G L SP+ G K + +++M ET+G + PE
Sbjct: 78 IAEAHGFILHSPQNGFHSTLK--LSDEIMITTSKDILETLGTTKQ--------PEKTLIA 127
Query: 249 DGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G WE+ QL +E+ W A ++I + W E L+G
Sbjct: 128 LGYSSWEQGQLEKEMMENNWLTAKADSNII-FHTPITERWREAAALIG 174
>gi|300776326|ref|ZP_07086184.1| probable transcriptional regulator [Chryseobacterium gleum ATCC
35910]
gi|300501836|gb|EFK32976.1| probable transcriptional regulator [Chryseobacterium gleum ATCC
35910]
Length = 182
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 17/154 (11%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
KG +LI+T + G IF R+V+L++ G G+ILN+ + +M S D F
Sbjct: 6 KGKILISTPDISG-DIFSRSVVLVIEHNESGAFGLILNKKN----SQMSSKFKD----FF 56
Query: 182 DRPL--FFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
D + + GGP+E KG + ++ + + Y E + V +
Sbjct: 57 DFKIEVYDGGPVENDKVFFIVKGKR----VTEIYTDITDEYYL--TEDIERIINAVLSSE 110
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAAC 273
+ E + F G GW QL+ E++ WTV
Sbjct: 111 LSIEHIKIFSGYSGWSPNQLDTEVQRKMWTVVDV 144
>gi|224024426|ref|ZP_03642792.1| hypothetical protein BACCOPRO_01151 [Bacteroides coprophilus DSM
18228]
gi|224017648|gb|EEF75660.1| hypothetical protein BACCOPRO_01151 [Bacteroides coprophilus DSM
18228]
Length = 196
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 22/158 (13%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRP--SLMSIKEMRSTVLDAA 177
P G +LIA+ L+ H F R+V+L+++ G GI++N+ +S+ ++ + +A
Sbjct: 15 PSPGGILIASPLLNDYH-FMRSVVLLITHSEEGSMGIVMNKDFRYHISLNQLAPELEGSA 73
Query: 178 GTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
P+F GGP+E D + +Q+ L G + + V++
Sbjct: 74 YI----PVFKGGPMER-----------DTIFFIHTLKQLKGALELGNGLYMNGDFKAVQQ 118
Query: 238 NAV--GPED--FRFFDGCCGWEKEQLNEEIRAGYWTVA 271
+ GP D RFF G GW QL +EI+ W +
Sbjct: 119 YILDGGPLDGHIRFFAGYAGWSHGQLQQEIQRNSWFIG 156
>gi|308800734|ref|XP_003075148.1| unnamed protein product [Ostreococcus tauri]
gi|116061702|emb|CAL52420.1| unnamed protein product [Ostreococcus tauri]
Length = 185
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 23/142 (16%)
Query: 152 GPSGIILNR----------PSLM---SIKEMRSTVLDAAGTFSDRPLFFGGPLEEGLFLV 198
G +GIILNR P +M + K + D AG P+ P + + +
Sbjct: 13 GSTGIILNRTQSWTLEKHCPEIMVHRNGKYWDALANDVAGV--GGPVGLAAPRDRSVIAL 70
Query: 199 SPKGGGDEVGKSGVFEQVMEGLY--FGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEK 256
S K + G+ E+V+ G++ ++ +++ N + PE+ F G GW
Sbjct: 71 STKP------QIGMTEEVVPGIHRVINLEKLAKMNSKLTGPNTLSPEELSLFVGYSGWAP 124
Query: 257 EQLNEEIRAGYWTVAACSPSVI 278
QL EI AGYWT+AA S + I
Sbjct: 125 GQLQSEIDAGYWTLAAASGAFI 146
>gi|291439336|ref|ZP_06578726.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
gi|291342231|gb|EFE69187.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
Length = 193
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 79/173 (45%), Gaps = 14/173 (8%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + ++ D AG
Sbjct: 12 GRLLVATPALADPN-FDRAVVLLLDHDEEGSLGVVLNRPTPVDVGDILEGWADLAGEPG- 69
Query: 183 RPLFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+F GGP L+ L + V P G E G + QV + E A + +A
Sbjct: 70 -VVFQGGPVSLDSALGVAVVPGGAAGEAAPLG-WRQVHGAIGLVDLE----APPELLASA 123
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+G R F G GW QL +E+ G W V P + + LW E+L
Sbjct: 124 LG--SLRIFAGYAGWGPGQLEDELVDGAWYVVESEPGDVSSPAPER-LWREVL 173
>gi|379713145|ref|YP_005301483.1| hypothetical protein RMB_00430 [Rickettsia massiliae str. AZT80]
gi|376333791|gb|AFB31023.1| hypothetical protein RMB_00430 [Rickettsia massiliae str. AZT80]
Length = 189
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 21/175 (12%)
Query: 109 LGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR-PSLMSIK 167
+GDK H + G L+AT + I+ +++I +LS G G+I NR + + +K
Sbjct: 1 MGDKIFHNL----SGKTLVATPHVITKGIYHKSLIHMLSHTEEGAIGLIFNRLVNHIDLK 56
Query: 168 EMRSTVLDAAGTFSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
D T P++ GGP+E +G FL S + + L F
Sbjct: 57 SFFKIKNDEITTPVMVPIYLGGPIEHEKGFFLHSSDYNKNLL------------LDFHND 104
Query: 226 ETVGCAAEMVKRNAVG--PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
V E+ + A G P++ F G W+ QL EE+ W V C+ I
Sbjct: 105 LAVSSNLEISEDIAFGKGPKNSLFIVGYTAWKPGQLEEELEKNLWLVMDCNKEFI 159
>gi|357389805|ref|YP_004904645.1| hypothetical protein KSE_28780 [Kitasatospora setae KM-6054]
gi|311896281|dbj|BAJ28689.1| hypothetical protein KSE_28780 [Kitasatospora setae KM-6054]
Length = 189
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 76/179 (42%), Gaps = 27/179 (15%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F R V+L+L + G G++LNRP+ + + + VLD +
Sbjct: 9 GRLLVATPVLTDPN-FARAVVLLLDHDAQGALGVVLNRPTPVDV----AAVLDGWAPLAG 63
Query: 183 RP--LFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
P LF GGP+ + V+ G D + +V + E A V
Sbjct: 64 HPAVLFQGGPVALDSALAVAVVPGEDHHAAPLGWRRVHGAIGLVDLE----APPEVLAGV 119
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLG------LWEELL 292
+G R F G GW QL +EI G W + C E+G L LW E+L
Sbjct: 120 LG--GMRVFAGYSGWSPGQLEDEIAEGAWHLVDC-------EAGDLSCAQPDRLWREVL 169
>gi|390944281|ref|YP_006408042.1| putative transcriptional regulator [Belliella baltica DSM 15883]
gi|390417709|gb|AFL85287.1| putative transcriptional regulator [Belliella baltica DSM 15883]
Length = 189
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 30/187 (16%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P+ G LLI+ L + F R+V+L+ G G++LN+ S++ + E+ +
Sbjct: 8 DPKSGHLLISKPFLQDEN-FVRSVVLLCENSESGAFGLVLNKLSILKLGELVDDL----- 61
Query: 179 TFSDRPLFFGGPLEEGLFLVSPKG-----GGDEVGKS----GVFEQVMEGLYFGTKETVG 229
+F + ++ GGP+E+ G G E+GK+ G F Q++ L
Sbjct: 62 SFLECDVYVGGPVEQNTLHFIYYGEKLLDGSIELGKNLWWGGDFNQLVSYL--------- 112
Query: 230 CAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWE 289
++ + ++ RFF G GW + QL EI W V + L S LW
Sbjct: 113 ------NQSLIDLDNIRFFIGYSGWTEGQLEAEIEDNTWIVNDNTDLESVLHSSPEELWR 166
Query: 290 ELLWLMG 296
+L MG
Sbjct: 167 IILKNMG 173
>gi|290476317|ref|YP_003469221.1| hypothetical protein XBJ1_3339 [Xenorhabdus bovienii SS-2004]
gi|289175654|emb|CBJ82457.1| conserved hypothetical protein [Xenorhabdus bovienii SS-2004]
Length = 187
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 20/180 (11%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRP----SLMSIKEMRSTVLDA--AG 178
LIA L + F R+V+ I + G G+++N+P S+ SI E +
Sbjct: 7 FLIAMPSLSDPY-FNRSVVYICEHDQNGAMGLVINKPIAQISIQSILEKLDITPEGRDDS 65
Query: 179 TFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
D+P+ GGPL E G L +P+ G S + Q+ + T + V A +
Sbjct: 66 INLDKPVMAGGPLSEEHGFILHTPQSGF----SSSI--QISDETMITTSKDVLEALGTTR 119
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
+ PE+ G WEK QL +EI W + S+I E+ W E L+G
Sbjct: 120 Q----PENVLMTLGYSSWEKGQLEQEIMENSWLTVSAESSII-FETPVADRWHEAASLLG 174
>gi|333909427|ref|YP_004483013.1| hypothetical protein Mar181_3067 [Marinomonas posidonica
IVIA-Po-181]
gi|333479433|gb|AEF56094.1| UPF0301 protein yqgE [Marinomonas posidonica IVIA-Po-181]
Length = 187
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 63/166 (37%), Gaps = 13/166 (7%)
Query: 116 TIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMR---ST 172
T+ + K LI+ L+ H FE TVI + P G GII+NRPS + E+ S
Sbjct: 2 TVFDSFKNHFLISMPHLNDPH-FEHTVIYLCEHTPAGAMGIIINRPSNIDFSELADHLSM 60
Query: 173 VLDAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAA 232
++ ++ ++ GGP+E + V V E +
Sbjct: 61 PIEHPDLLTET-IYTGGPVEAERGFILHTADKRWNNTLPVTSDVSLSASLKALEDIA--- 116
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GP FR GC GWE QL EI W V V+
Sbjct: 117 -----QGQGPNAFRITLGCAGWEDGQLETEIANNDWLVCEADLDVL 157
>gi|120406986|ref|YP_956815.1| hypothetical protein Mvan_6057 [Mycobacterium vanbaalenii PYR-1]
gi|166228789|sp|A1TI09.1|Y6057_MYCVP RecName: Full=UPF0301 protein Mvan_6057
gi|119959804|gb|ABM16809.1| protein of unknown function DUF179 [Mycobacterium vanbaalenii
PYR-1]
Length = 201
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 75/186 (40%), Gaps = 17/186 (9%)
Query: 111 DKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMR 170
D A + G +L+A L F R+VI ++ G G++LNRPS ++
Sbjct: 9 DFVAPAAYRVRAGTMLLANTDLLE-PTFRRSVIYVVEHNDGGTLGVVLNRPSETAVY--- 64
Query: 171 STVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE 226
VL + +P +F GGP+ + L L + + G D G G+ +
Sbjct: 65 -NVLPQWAKLATKPKTMFIGGPVKRDAALCLATLRVGIDPAGVDGLRHVQGRVVMVDLDA 123
Query: 227 TVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLG 286
A MV E R F G GW QL EI W V + PS + +E +
Sbjct: 124 DPDSIAPMV-------EGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVEP-RVD 175
Query: 287 LWEELL 292
LW +L
Sbjct: 176 LWARIL 181
>gi|307102695|gb|EFN50964.1| hypothetical protein CHLNCDRAFT_59365 [Chlorella variabilis]
Length = 344
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 93/245 (37%), Gaps = 29/245 (11%)
Query: 40 CKRVGFSSSITCCHLESSLPSDDHHKPLIDADWRSFRARLVAAEQVIRPQVQEPSVDPDA 99
C+ H+ +LP +D+DWR FRA+LVA+ A
Sbjct: 31 CRAAASGDDDAASHVPDTLPVAG-----LDSDWRKFRAQLVASSSGAAAAAPAAGAATPA 85
Query: 100 AVNYPPQNSLGDKWAHTIHEPEKGCLLIATEKLDGVH--IFERTVILILSMEPMGPSGII 157
+ AH++ +PE GCLL+A + G F +V+L+ + + G +G+I
Sbjct: 86 DAAW----------AHSLPQPEHGCLLLANPLMFGASQTYFHMSVVLVWAHDSRGSAGLI 135
Query: 158 LNRPSLMSIKEMRSTVLDAAG----TFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVF 213
LNR + + + S AG F L+ GG + G V G ++ S
Sbjct: 136 LNRLAGWPTEYLVSRFGAGAGFLTPEFDKAQLYLGG--DVGPDTVHLLHGVPDLAAS--- 190
Query: 214 EQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAAC 273
+V G++ G E A + F+ GW QL E G W +
Sbjct: 191 SEVFSGVWLGGFE---AAKRGIAEGRYEASQFKVLTRYAGWGPGQLESECARGVWLPVSA 247
Query: 274 SPSVI 278
S +
Sbjct: 248 SKHAV 252
>gi|388466754|ref|ZP_10140964.1| AlgH family protein [Pseudomonas synxantha BG33R]
gi|388010334|gb|EIK71521.1| AlgH family protein [Pseudomonas synxantha BG33R]
Length = 189
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 138 FERTVILILSMEPMGPSGIILNRP---SLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEG 194
F +T+ I+ G G+++NRP SL I E LD D P++ GGP++
Sbjct: 25 FAQTLTYIVEHTANGAMGLVVNRPQELSLADILEQLRPELDPPTRCQDVPIYIGGPVQTD 84
Query: 195 L-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
F++ P G + +EG+ T + V A + VGPE G G
Sbjct: 85 RGFVLHPTGPQYQATVD------LEGVSLSTSQDVLFAIA----DGVGPEQSLITLGYAG 134
Query: 254 WEKEQLNEEIRAGYW 268
WE QL E+ + W
Sbjct: 135 WEAGQLEAELASNAW 149
>gi|72162788|ref|YP_290445.1| hypothetical protein Tfu_2389 [Thermobifida fusca YX]
gi|119391306|sp|Q47MA0.1|Y2389_THEFY RecName: Full=UPF0301 protein Tfu_2389
gi|71916520|gb|AAZ56422.1| conserved hypothetical protein [Thermobifida fusca YX]
Length = 198
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 73/183 (39%), Gaps = 11/183 (6%)
Query: 114 AHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV 173
AH G LL+AT L+ + + V +I G G+ILNRPS + + E V
Sbjct: 3 AHMDRLSLTGALLVATPLLEDPNFYRSVVFVIDDTPDEGTLGVILNRPSELGVGE----V 58
Query: 174 LDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVG 229
L G +P +F GGP+ + GL L P G +G + + G
Sbjct: 59 LAEWGEHVSQPAVMFAGGPVGQDAGLALAVPDDGQRPLGWKSLDAMDAKTWPNGLGTVDL 118
Query: 230 CAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWE 289
+ +A+ R F G GW QL EI G W V + + + GLW
Sbjct: 119 DTPPQLVADAL--RQMRVFAGYAGWSAGQLRAEIDQGAWYVLPATVDDV-FCADPRGLWS 175
Query: 290 ELL 292
+L
Sbjct: 176 RVL 178
>gi|167762862|ref|ZP_02434989.1| hypothetical protein BACSTE_01225 [Bacteroides stercoris ATCC
43183]
gi|167699202|gb|EDS15781.1| putative ACR, COG1678 [Bacteroides stercoris ATCC 43183]
Length = 197
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 17/185 (9%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P +G +LI+ E ++F R+V+L+ G G+++N+P + + ++ S +
Sbjct: 17 PTRGKVLIS-EPFLCDYMFGRSVVLLADHTQDGTMGLVMNKPLPLFLNDLLSEI----NC 71
Query: 180 FSDRPLFFGGPLEEG--LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
D P++ GGP+ +L + + D + + +GLY T + +
Sbjct: 72 REDIPIYKGGPMSTDTLFYLHTLENITDSL-------PIADGLYLNGDFT-AIKQFITEG 123
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL-WLMG 296
N++ RFF G GWE QL +EI W V + E LW++ L L G
Sbjct: 124 NSIKGR-IRFFLGYSGWEPGQLKKEIEENTWLVDKADIPSLMDEKACRNLWKDALSKLGG 182
Query: 297 RRKVW 301
+ ++W
Sbjct: 183 KYEMW 187
>gi|453078358|ref|ZP_21981089.1| hypothetical protein G419_23584 [Rhodococcus triatomae BKS 15-14]
gi|452757114|gb|EME15521.1| hypothetical protein G419_23584 [Rhodococcus triatomae BKS 15-14]
Length = 201
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 82/189 (43%), Gaps = 23/189 (12%)
Query: 111 DKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMR 170
D+ A T G LL++ + F RTV+ ++ G G++LNR S ++
Sbjct: 9 DRTASTERAVRPGSLLVSATAMTDPS-FRRTVVYVIEHNDGGSLGVVLNRASETAVH--- 64
Query: 171 STVLDAAGTFSDRP--LFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE 226
+VL RP LF GGP L+ L L + + G G G+ + ++G
Sbjct: 65 -SVLPQWAPLCARPQALFIGGPVKLDSALCLATVRTGARIDGVPGL--RRVDGRVVMVD- 120
Query: 227 TVGCAAEMVKRNAVGP--EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPS-VIGLESG 283
+ C E V GP E R F G GW QL+ E++ W V + PS VIG
Sbjct: 121 -LDCDPEQV-----GPHLEGVRVFAGYSGWTMGQLDGELQRDDWIVLSALPSDVIGPPRA 174
Query: 284 TLGLWEELL 292
LW ++L
Sbjct: 175 D--LWAQVL 181
>gi|297559347|ref|YP_003678321.1| hypothetical protein Ndas_0367 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296843795|gb|ADH65815.1| protein of unknown function DUF179 [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 192
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ +P G LL+A L F R+V+ ++ G G+ILNRP M++ E V+
Sbjct: 1 MDQPMTGRLLVAAPMLQ-EDSFRRSVVFVVDDAADGTLGVILNRPLGMAVDE----VVTD 55
Query: 177 AGTFSDRP--LFFGGPLEEGLFLVSPKGGGDEVGKSGVFE-----QVMEGL-------YF 222
G ++ P +F GGP+ GL G G +G +G E +EGL
Sbjct: 56 WGAYASEPAVMFSGGPV--GL------GSGIALGAAGPGEPPPGWSPLEGLDPHLGLDGI 107
Query: 223 GTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLES 282
G + G A V A+G FR F G GW QL EI G W V + +
Sbjct: 108 GVVDLDGPA--QVLGGALGA--FRLFAGYAGWSAGQLAGEIEEGAWYVVDAVADDV-FTT 162
Query: 283 GTLGLWEELL 292
GLW +L
Sbjct: 163 APEGLWSRVL 172
>gi|255691808|ref|ZP_05415483.1| putative transcriptional regulator [Bacteroides finegoldii DSM
17565]
gi|260622526|gb|EEX45397.1| putative ACR, COG1678 [Bacteroides finegoldii DSM 17565]
Length = 196
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 33/189 (17%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR--PSLMSIKEMRSTVLDAA 177
P +G +LI+ L F R+VIL++ G G+++N+ P L++ M LD
Sbjct: 17 PSRGKILISEPFLRDA-TFGRSVILLVDHTEEGTMGLVINKQLPLLLNDVVMEFKYLDEI 75
Query: 178 GTFSDRPLFFGGPL-EEGLFLV---SPKGGGDEVGK----SGVFEQVMEGLYFGTKETVG 229
PL+ GGP+ + LF + G V K +G FE++ + + G K
Sbjct: 76 ------PLYKGGPVATDTLFYLHTLEKIPGSIPVSKGLFLNGDFEEIKKYILQGNKVN-- 127
Query: 230 CAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWE 289
E RFF G GWE QL+ EI+ W V+ S + + + T +W+
Sbjct: 128 -------------ECIRFFLGYSGWESNQLHSEIKENTWLVSKEENSYL-MRNDTKDMWK 173
Query: 290 ELLWLMGRR 298
E L +G +
Sbjct: 174 EALEKLGSK 182
>gi|423299721|ref|ZP_17277746.1| UPF0301 protein [Bacteroides finegoldii CL09T03C10]
gi|408473530|gb|EKJ92052.1| UPF0301 protein [Bacteroides finegoldii CL09T03C10]
Length = 196
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 33/189 (17%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR--PSLMSIKEMRSTVLDAA 177
P +G +LI+ L F R+VIL++ G G+++N+ P L++ M LD
Sbjct: 17 PSRGKILISEPFLRDA-TFGRSVILLVDHTEEGTMGLVINKQLPLLLNDVIMEFKYLDEI 75
Query: 178 GTFSDRPLFFGGPL-EEGLFLV---SPKGGGDEVGK----SGVFEQVMEGLYFGTKETVG 229
PL+ GGP+ + LF + G V K +G FE++ + + G K +
Sbjct: 76 ------PLYKGGPVATDTLFYLHTLEKIPGSIPVSKGLFLNGDFEEIKKYILQGNKVS-- 127
Query: 230 CAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWE 289
E RFF G GWE QL+ EI+ W V+ S + + + T +W+
Sbjct: 128 -------------ECIRFFLGYSGWESNQLHNEIKENIWLVSEEENSYL-MRNDTKDMWK 173
Query: 290 ELLWLMGRR 298
E L +G +
Sbjct: 174 EALEKLGSK 182
>gi|295836874|ref|ZP_06823807.1| transcriptional regulator [Streptomyces sp. SPB74]
gi|295826249|gb|EFG64754.1| transcriptional regulator [Streptomyces sp. SPB74]
Length = 193
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 76/179 (42%), Gaps = 26/179 (14%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F R V+L+L + G G++LNRP+ + + + +L G +
Sbjct: 12 GRLLVATPALADPN-FARAVVLVLDHDAEGTLGVVLNRPTPVDVDD----ILAGWGPLAG 66
Query: 183 RP--LFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
P +F GGP++ L S G G+ G + G + G +
Sbjct: 67 APGVVFQGGPVQ----LDSALGVAVVPGEPGTRSTPL-----GWRRVYGAIGLVDLETP- 116
Query: 241 GPEDF-------RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
PE R F G GW QL +E+ AG W V P I E GLW E+L
Sbjct: 117 -PELLAAALGALRIFAGYAGWGPGQLEDELEAGAWYVVDAEPGDISAER-PEGLWREVL 173
>gi|298484193|ref|ZP_07002358.1| transcriptional regulator [Bacteroides sp. D22]
gi|298269606|gb|EFI11202.1| transcriptional regulator [Bacteroides sp. D22]
Length = 196
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR--PSLMSIKEMRSTVLDAA 177
P +G +LI+ L F R+VIL++ G G+++N+ P ++ M LD
Sbjct: 17 PSRGRILISEPFLRDA-TFGRSVILLVDHTDEGSMGLVINKQLPLFLNDIIMEFKYLDEI 75
Query: 178 GTFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
PL+ GGP+ + +L + D + S +GLY G E+
Sbjct: 76 ------PLYKGGPIATDTLFYLHTLSDIPDSISIS-------KGLYLN-----GDFDEIK 117
Query: 236 KRNAVG---PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
K G E RFF G GW+ EQLN EIR W V+ S + +++ +W L
Sbjct: 118 KYILQGNKISECIRFFLGYSGWDSEQLNNEIRENTWLVSEEEKSYL-MKNNIKDMWRTAL 176
Query: 293 WLMGRR 298
+G +
Sbjct: 177 EKLGSK 182
>gi|374598072|ref|ZP_09671074.1| protein of unknown function DUF179 [Myroides odoratus DSM 2801]
gi|423323590|ref|ZP_17301432.1| hypothetical protein HMPREF9716_00789 [Myroides odoratimimus CIP
103059]
gi|373909542|gb|EHQ41391.1| protein of unknown function DUF179 [Myroides odoratus DSM 2801]
gi|404609355|gb|EKB08738.1| hypothetical protein HMPREF9716_00789 [Myroides odoratimimus CIP
103059]
Length = 187
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 22/192 (11%)
Query: 116 TIHEPEKGCLLIATEK-LDGVHI-FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV 173
T HE KG LIA + I F ++VIL+ G G ILN+P+ + E+ V
Sbjct: 2 TKHEINKGDYLIALPSGYNPTDIEFNQSVILLTDHNIDGCMGFILNKPTPYLLSEL---V 58
Query: 174 LDAAGTFSDRPLFFGGPLE-EGLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGC 230
++ G F+ ++ GGP+E + LF + P D + + + LY+G
Sbjct: 59 PESNGAFT---VYHGGPVESDRLFCIHKCPDLIPDSIA-------ITDQLYWGGD--FSA 106
Query: 231 AAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEE 290
++ + D RFF G GW+ QL E+ W + P + E T W++
Sbjct: 107 IFSHIEMGLLTHLDLRFFMGYSGWDNGQLEMELTNQNWVKTSTLPFNL-FEQATKSYWKQ 165
Query: 291 LLWLMGRR-KVW 301
+ +G+ ++W
Sbjct: 166 AIQTLGKDFRIW 177
>gi|126663448|ref|ZP_01734445.1| putative transcriptional regulator [Flavobacteria bacterium BAL38]
gi|126624396|gb|EAZ95087.1| putative transcriptional regulator [Flavobacteria bacterium BAL38]
Length = 186
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 14/172 (8%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P+KG LLIA + G F R+V+L+ G G ILN+P +I ++ + +
Sbjct: 6 PKKGHLLIAEPSILGDVSFNRSVVLLAEHNNEGSIGFILNKPLNYTINDLLPEI---EAS 62
Query: 180 FSDRPLFFGGPLEE-GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
F ++ GGP+E+ L+ + D + S ++ G+++G +++
Sbjct: 63 FK---IYNGGPVEQDDLYFI--HNIPDVIPNS---IEISNGIFWGGD--FETTKQLINEG 112
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEE 290
+ RFF G GW QL E++ W V+ + L + W+E
Sbjct: 113 KITRNHIRFFLGYSGWSINQLEIEMQENAWIVSENTLKDKLLSKASDLFWKE 164
>gi|315499618|ref|YP_004088421.1| hypothetical protein Astex_2625 [Asticcacaulis excentricus CB 48]
gi|315417630|gb|ADU14270.1| protein of unknown function DUF179 [Asticcacaulis excentricus CB
48]
Length = 216
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 73/180 (40%), Gaps = 7/180 (3%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRP--SLMSIKEMRSTVLDAAGT 179
+G LL+A LD + F+ +VI + +P GI+LN+P L + M +D
Sbjct: 26 QGRLLVAMPSLDDPN-FDHSVIYMCQHDPESAMGIVLNQPIGGLTFPRMMEELGIDITDN 84
Query: 180 -FSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
P++ GGP+ E G L S DEV + L G TV +
Sbjct: 85 RHVATPIYNGGPVQNERGFVLHSLDYFIDEVTLPLDIDPEALELRDGIGLTVSRDILVDL 144
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GP G GW QL EIR W VA C ++ + LW + L L+G
Sbjct: 145 ARGAGPSRVLIALGYAGWGPGQLEAEIRDNAWLVAPCQADLLFSHDAS-ALWSKTLKLLG 203
>gi|160886055|ref|ZP_02067058.1| hypothetical protein BACOVA_04061 [Bacteroides ovatus ATCC 8483]
gi|262407943|ref|ZP_06084491.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|299145434|ref|ZP_07038502.1| putative transcriptional regulator [Bacteroides sp. 3_1_23]
gi|156108868|gb|EDO10613.1| putative ACR, COG1678 [Bacteroides ovatus ATCC 8483]
gi|262354751|gb|EEZ03843.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|298515925|gb|EFI39806.1| putative transcriptional regulator [Bacteroides sp. 3_1_23]
Length = 196
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 33/189 (17%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR--PSLMSIKEMRSTVLDAA 177
P +G +LI+ L F R+VIL++ G G+++N+ P ++ M LD
Sbjct: 17 PSRGRILISEPFLRDA-TFGRSVILLVDHTDEGSMGLVINKQLPLFLNDIIMEFKYLDEI 75
Query: 178 GTFSDRPLFFGGPL-EEGLFLV---SPKGGGDEVGK----SGVFEQVMEGLYFGTKETVG 229
PL+ GGP+ + LF + S G + K +G F+++ + + G K +
Sbjct: 76 ------PLYKGGPIATDTLFYLHTLSDIPGSISISKGLYLNGDFDEIKKYILQGNKIS-- 127
Query: 230 CAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWE 289
E RFF G GW+ EQLN EIR W V+ S + +++ +W
Sbjct: 128 -------------ECIRFFLGYSGWDSEQLNNEIRENTWLVSEEEKSYL-MKNNIKDMWR 173
Query: 290 ELLWLMGRR 298
L +G +
Sbjct: 174 TALEKLGSK 182
>gi|443488551|ref|YP_007366698.1| hypothetical protein MULP_00048 [Mycobacterium liflandii 128FXT]
gi|442581048|gb|AGC60191.1| hypothetical protein MULP_00048 [Mycobacterium liflandii 128FXT]
Length = 179
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 68/168 (40%), Gaps = 20/168 (11%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRP--LFFGGPL--EE 193
F R+VI I+ G G++LNRPS ++ VL + +P +F GGP+ +
Sbjct: 13 FRRSVIYIVEHNDGGTLGVVLNRPSETAVHN----VLPQWAKLAAKPKTMFIGGPVKRDA 68
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
L L + + G D G SG+ + A +V E R F G G
Sbjct: 69 ALCLATLRVGADPGGVSGLRHVAGRIVMVDLDADPDLIAPLV-------EGVRIFAGYSG 121
Query: 254 WEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRRKVW 301
W QL EI W V + PS + L LW L RR+ W
Sbjct: 122 WTIGQLEGEIERDDWIVLSALPSDV-LVPPRADLWGRTL----RRQPW 164
>gi|309813279|ref|ZP_07706995.1| conserved hypothetical protein [Dermacoccus sp. Ellin185]
gi|308432775|gb|EFP56691.1| conserved hypothetical protein [Dermacoccus sp. Ellin185]
Length = 206
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 68/157 (43%), Gaps = 21/157 (13%)
Query: 122 KGCLLIATEKL---DGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
G LL+A + D IF R+V+ +L G G++L P + + +A
Sbjct: 24 TGRLLVAVPRAHDRDEGDIFTRSVVFVLHHGDDGAQGVVLTEPLETGVDSVLPG-WQSAC 82
Query: 179 TFSDRPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAA--EM 234
+ DR LF GGP L+ + L G GD VG + FG+ V A E+
Sbjct: 83 SAPDR-LFQGGPVGLDTAVALAGVPGRGDVVGAT---------RLFGSLAVVDLDAPPEI 132
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
V G R F G CGWE QL+ E+ G+W A
Sbjct: 133 VAPQLSG---LRVFAGNCGWEPGQLDVELANGWWVRA 166
>gi|159036578|ref|YP_001535831.1| hypothetical protein Sare_0923 [Salinispora arenicola CNS-205]
gi|157915413|gb|ABV96840.1| protein of unknown function DUF179 [Salinispora arenicola CNS-205]
Length = 196
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
E G LL+A L + F+RTV+L+++ EP G G++LNR + + + + VL G
Sbjct: 14 ESMAGRLLVAAPTLKDPN-FDRTVVLLVAHEPGGALGVVLNRATEIPVAD----VLGDWG 68
Query: 179 TFSDRP--LFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
+ P +F GGP++ + L + + + F+Q+ + GT + A++
Sbjct: 69 ELARHPAVIFEGGPVQPDSAICLARMR---HPLRRMKSFQQISGAI--GTLDLSVDPAQL 123
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
++A+ R F G GWE QL +EI G W V P
Sbjct: 124 --QDAI--SGIRVFAGYSGWEPGQLEQEIEGGSWFVLDALP 160
>gi|331700372|ref|YP_004336611.1| hypothetical protein Psed_6670 [Pseudonocardia dioxanivorans
CB1190]
gi|326955061|gb|AEA28758.1| UPF0301 protein yqgE [Pseudonocardia dioxanivorans CB1190]
Length = 201
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 20/159 (12%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+A+ L + F RTV+ ++ G G++LNRPS +++ VL A S
Sbjct: 21 GTLLVASPALSDPN-FRRTVVFVVEHRDDGSLGVVLNRPSEADVRD----VLPAWEALSS 75
Query: 183 RP--LFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
+P +F GGP++ L L + + G G GV + V
Sbjct: 76 QPRSVFVGGPVDARTALCLAALRTGVATSGLDGV---------VAVRAPVALVDLDSDPA 126
Query: 239 AVGPE--DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
A+ P+ R F G GW QL EI G W V P
Sbjct: 127 ALAPKLRGLRVFAGYSGWGPGQLAGEIERGDWIVVPALP 165
>gi|260913266|ref|ZP_05919748.1| YqgE like protein [Pasteurella dagmatis ATCC 43325]
gi|260632853|gb|EEX51022.1| YqgE like protein [Pasteurella dagmatis ATCC 43325]
Length = 186
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM---RSTVLDAAGTFS 181
LIA +++ + F R+V+ I G G++LN+P+ +SI E+ + ++ T+S
Sbjct: 8 FLIAMPQMEDDY-FSRSVVYICEHNDQGSMGLVLNQPTDLSIAELCAKMNFMMKTDRTYS 66
Query: 182 DRPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+ + GGP +E G F++ K D V +Q+ +T G
Sbjct: 67 NDLVLAGGPTNVERG-FILHTKTEQDFKHSYKVTDQLTLTTSADVIDTFGTKQ------- 118
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE + GC W QL +EI W V + ++
Sbjct: 119 -APEKYLVTLGCASWSPNQLEDEIVNNDWLVVPANNRIL 156
>gi|67458436|ref|YP_246060.1| hypothetical protein RF_0044 [Rickettsia felis URRWXCal2]
gi|75537100|sp|Q4UNH2.1|Y044_RICFE RecName: Full=UPF0301 protein RF_0044
gi|67003969|gb|AAY60895.1| Putative transcriptional regulator [Rickettsia felis URRWXCal2]
Length = 189
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 21/175 (12%)
Query: 109 LGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR-PSLMSIK 167
+GDK H + G L+AT I+ +++I +LS G G+I NR + + +K
Sbjct: 1 MGDKIFHNL----SGKTLVATPHAITKGIYHKSLIYMLSHTEEGAIGLIFNRLVNHIDLK 56
Query: 168 EMRSTVLDAAGTFSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
D T P++ GGP+E +G FL S + + L F
Sbjct: 57 SFFKIKNDEITTPVMVPIYLGGPVEHEKGFFLHSSDYNKNLL------------LDFQND 104
Query: 226 ETVGCAAEMVKRNAVG--PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
V E+ + A G P++ F G W+ QL EE+ W V C+ I
Sbjct: 105 LAVSSNLEISEDIAFGKGPKNSLFIVGYTAWKPGQLEEELEKNLWLVMDCNKEFI 159
>gi|198284749|ref|YP_002221070.1| hypothetical protein Lferr_2669 [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218665957|ref|YP_002427429.1| hypothetical protein AFE_3062 [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198249270|gb|ACH84863.1| protein of unknown function DUF179 [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218518170|gb|ACK78756.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 185
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 122 KGCLLIATEKL-DGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE-MRSTVLDAAGT 179
K LLIA L DGV F+RTVI++ G G+++NR +++ + +R+ + +
Sbjct: 7 KNHLLIAMPALHDGV--FDRTVIVVCEHNAEGAMGVVINRLVDINMSDALRAVDIQPSEE 64
Query: 180 FSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
RP+++GGP+ + G L SP+G + + L + + ++++
Sbjct: 65 MIHRPVYWGGPIQPQHGFILHSPRG------------EWLSSLEVNDDLALTSSPDILQA 112
Query: 238 NAVGPEDFRFF--DGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
A E R+ G GW +QL E++ W +VI
Sbjct: 113 IAQHEEPQRYLLALGYAGWGAQQLEAELQDNAWLHGPLDMAVI 155
>gi|388457424|ref|ZP_10139719.1| transcriptional regulator [Fluoribacter dumoffii Tex-KL]
Length = 187
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 69/150 (46%), Gaps = 15/150 (10%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSL--MSIKEMRSTVLDAAGTFSD 182
LLIA L+ + FERTVI I G G+I+NRP +SI + + S
Sbjct: 11 LLIAMPSLNDPN-FERTVIYICEHHEQGSVGLIINRPMQFPLSIVFEQLHIEPVRLEQSR 69
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA--V 240
PL FGGP++ V K G+ +S +F Q + TV + ++++ A
Sbjct: 70 MPLMFGGPVQPERGFVIHKQFGE--WRSSLFLQ--------DEVTVTTSNDIIRAIAEDK 119
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270
GP+D G GW + QL +EI W V
Sbjct: 120 GPKDVLITLGYAGWVENQLEKEILENTWLV 149
>gi|331005514|ref|ZP_08328892.1| UPF0301 protein YqgE [gamma proteobacterium IMCC1989]
gi|330420706|gb|EGG94994.1| UPF0301 protein YqgE [gamma proteobacterium IMCC1989]
Length = 184
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 57/141 (40%), Gaps = 8/141 (5%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEGLFL 197
F +TV I G GI++N+P+ + E+ S + +D PL GGP+++
Sbjct: 22 FSKTVTYICEHNEGGAMGIVINQPASIYYSELFSQLKLGENIATDEPLLLGGPVKKERGF 81
Query: 198 VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKE 257
V G V + + G+K+ + A N GP+ GC GW
Sbjct: 82 VLHSGEQSWASTMPVSDDIS---ITGSKDILEAIA-----NNQGPKSALIALGCAGWSTN 133
Query: 258 QLNEEIRAGYWTVAACSPSVI 278
QL +EI W + +I
Sbjct: 134 QLEQEIAENSWLTVPGNKQII 154
>gi|238063031|ref|ZP_04607740.1| hypothetical protein MCAG_03997 [Micromonospora sp. ATCC 39149]
gi|237884842|gb|EEP73670.1| hypothetical protein MCAG_03997 [Micromonospora sp. ATCC 39149]
Length = 196
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 26/161 (16%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+RTV+L+++ EP G G++LNR + V D G +SD
Sbjct: 18 GRLLVATPTLKDPN-FDRTVVLLVAHEPGGALGVVLNRAT-------EVPVADVLGEWSD 69
Query: 183 RP-----LFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
LF GGP++ + L + + V + F QV G T+ +A+
Sbjct: 70 LARDPAVLFEGGPVQPDSAICLARLR---NPVKRLRGFHQVS-----GAVGTIDLSADPE 121
Query: 236 K-RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
+ R ++G R F G GW QL +EI G W V P
Sbjct: 122 RLRESIG--GIRVFAGYSGWGAGQLEQEIEDGSWFVLDALP 160
>gi|300791132|ref|YP_003771423.1| transcriptional regulator [Amycolatopsis mediterranei U32]
gi|399543008|ref|YP_006555671.1| transcriptional regulator [Amycolatopsis mediterranei S699]
gi|299800646|gb|ADJ51021.1| putative transcriptional regulator [Amycolatopsis mediterranei U32]
gi|398323778|gb|AFO82725.1| transcriptional regulator [Amycolatopsis mediterranei S699]
Length = 190
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 76/184 (41%), Gaps = 21/184 (11%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
E E G LL+A + + F RTV+ ++ G G++LNRPS +++ + VL G
Sbjct: 6 EVEPGTLLVAAPTMVDPN-FRRTVVFVIDHREEGTLGVVLNRPSDVAVHD----VLPNWG 60
Query: 179 TFSDRP--LFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
P +F GGP+E+ L L + + G GV + V
Sbjct: 61 GHVAEPQAVFVGGPVEKKTALCLAALRTGETAASVPGV---------IAVRGPVALVDLD 111
Query: 235 VKRNAVGPE--DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
A+ P+ R F G GW QL EI W + PS I L S LW ++L
Sbjct: 112 TDPEALVPKVRGVRVFAGYAGWNSGQLAGEIEREDWVIVPALPSDI-LASPDGDLWSQVL 170
Query: 293 WLMG 296
G
Sbjct: 171 RRQG 174
>gi|336402577|ref|ZP_08583309.1| hypothetical protein HMPREF0127_00622 [Bacteroides sp. 1_1_30]
gi|335947974|gb|EGN09721.1| hypothetical protein HMPREF0127_00622 [Bacteroides sp. 1_1_30]
Length = 207
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR--PSLMSIKEMRSTVLDAA 177
P +G +LI+ L F R+VIL++ G G+++N+ P ++ M LD
Sbjct: 28 PSRGRILISEPFLRDA-TFGRSVILLVDHTDEGSMGLVINKQLPLFLNDIIMEFKYLDEI 86
Query: 178 GTFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
PL+ GGP+ + +L + D + S +GLY G E+
Sbjct: 87 ------PLYKGGPIATDTLFYLHTLSDIPDSISIS-------KGLYLN-----GDFDEIK 128
Query: 236 KRNAVG---PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
K G E RFF G GW+ EQLN EIR W V+ S + +++ +W L
Sbjct: 129 KYILQGNKISECIRFFLGYSGWDSEQLNNEIRENTWLVSEEEKSYL-MKNNIKDMWRTAL 187
Query: 293 WLMGRR 298
+G +
Sbjct: 188 EKLGSK 193
>gi|327405356|ref|YP_004346194.1| hypothetical protein Fluta_3384 [Fluviicola taffensis DSM 16823]
gi|327320864|gb|AEA45356.1| protein of unknown function DUF179 [Fluviicola taffensis DSM 16823]
Length = 191
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 22/186 (11%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P+KG LL++ L + F R VIL+ G G+ILN + + + + +
Sbjct: 12 PKKGDLLLSEPFLMDSN-FSRVVILLCEHNEEGSFGLILNNTLEIDVNSIVTDFPEVK-- 68
Query: 180 FSDRPLFFGGPLEEGLFLVSPKG----GGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
P+ FGGP+E + G ++GK+ LY G + +
Sbjct: 69 ---IPVGFGGPVERSQLFYMHQNEQIEGCTKIGKN---------LYLGGDYLE--IKDRI 114
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEEL-LWL 294
K++ + + RFF G GW K QL EEI W V + + LW +L L L
Sbjct: 115 KKDEMTASNLRFFIGYTGWGKGQLQEEIDELSWVVMKAPDDLNVFNAFEDELWRDLILQL 174
Query: 295 MGRRKV 300
G+ K+
Sbjct: 175 GGKYKI 180
>gi|170718189|ref|YP_001785214.1| hypothetical protein HSM_1900 [Haemophilus somnus 2336]
gi|254800649|sp|B0UWW1.1|Y1900_HAES2 RecName: Full=UPF0301 protein HSM_1900
gi|168826318|gb|ACA31689.1| protein of unknown function DUF179 [Haemophilus somnus 2336]
Length = 187
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 19/161 (11%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM---RSTVLDAAGTFS 181
LIA L+ + F+R+V+ I G G++L + + +SI E+ + ++ +S
Sbjct: 7 FLIAMPHLEDEN-FQRSVVYICENNEQGSMGLVLTQATDLSIAELCAKMNFMMADEREYS 65
Query: 182 DRPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR-- 237
D+ + GGP LE G L K E S +V + +Y T +A+++
Sbjct: 66 DKLVLLGGPVNLEHGFIL--HKKTAQEFQHSY---KVTDQIYLTT------SADIINTFG 114
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
A PE + GC WE QL EI W V +++
Sbjct: 115 TAQSPEKYLVTLGCARWEPNQLENEIANNDWLVVPADENIL 155
>gi|119945032|ref|YP_942712.1| hypothetical protein Ping_1286 [Psychromonas ingrahamii 37]
gi|119863636|gb|ABM03113.1| hypothetical protein DUF179 [Psychromonas ingrahamii 37]
Length = 197
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
K LIA L+ + F+ +V+ I + G G I+N P ++++E+ + V D+ +
Sbjct: 17 KDHFLIAMPSLNDPY-FKHSVVYICEHDEKGAMGFIINFPVKLTLQELLNNV-DSIDHYP 74
Query: 182 DRPL----FFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
+ PL F GGPLE G L SP + K + +Q+M T+G E
Sbjct: 75 EPPLLNPVFLGGPLELERGFVLHSPVTDNSQSTK--LNDQLMVSNSNAILSTLGTENE-- 130
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE++ G W QL +E+ +W +I
Sbjct: 131 ------PEEYIVTLGYASWSSGQLEKEMNDNHWISMESQNDII 167
>gi|291453795|ref|ZP_06593185.1| UPF0301 protein [Streptomyces albus J1074]
gi|359149425|ref|ZP_09182435.1| hypothetical protein StrS4_23294 [Streptomyces sp. S4]
gi|291356744|gb|EFE83646.1| UPF0301 protein [Streptomyces albus J1074]
Length = 193
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 75/174 (43%), Gaps = 16/174 (9%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L H F+R V+L+L + G G++LNRP+ + + + +L+ G +
Sbjct: 12 GRLLVATPALADPH-FDRAVVLLLDHDAEGSLGVVLNRPTPVGVGD----ILEGWGELAG 66
Query: 183 RP--LFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
P +F GGP L+ L + GG + V + E A +
Sbjct: 67 DPGVVFQGGPVSLDSALGVAVIPGGPGCADPPLGWRPVHGAIGLVDLE----APPELLAA 122
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
A+G R F G GW QL EE+ G W V P I GLW +L
Sbjct: 123 ALG--SLRIFAGYAGWGPGQLEEELVQGAWYVVESEPGDISAPRPE-GLWRAVL 173
>gi|451334806|ref|ZP_21905377.1| hypothetical protein C791_1477 [Amycolatopsis azurea DSM 43854]
gi|449422653|gb|EMD28025.1| hypothetical protein C791_1477 [Amycolatopsis azurea DSM 43854]
Length = 190
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 78/182 (42%), Gaps = 17/182 (9%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
E E G LL+A + + F RTV+ ++ G G++LNRPS + + + VL G
Sbjct: 6 EVEPGTLLVAAPTMVDPN-FRRTVVFVIDHRDEGTLGVVLNRPSDVPVYD----VLPNWG 60
Query: 179 TFSDRP--LFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
P +F GGP+E+ L L + + G GV V + +T EM
Sbjct: 61 GHVAEPQSVFVGGPVEKKTALCLAALRTGETASSVPGVI-AVRGPVALVDLDT---DPEM 116
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWL 294
+ G R F G GW+ QL EI W + PS + L S LW ++L
Sbjct: 117 LVPKVRG---VRVFAGYAGWDSGQLANEIERDDWVIVPALPSDV-LASPHHDLWGQVLRR 172
Query: 295 MG 296
G
Sbjct: 173 QG 174
>gi|423213365|ref|ZP_17199894.1| UPF0301 protein [Bacteroides xylanisolvens CL03T12C04]
gi|392693825|gb|EIY87055.1| UPF0301 protein [Bacteroides xylanisolvens CL03T12C04]
Length = 207
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 33/189 (17%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR--PSLMSIKEMRSTVLDAA 177
P +G +LI+ L F R+VIL++ G G+++N+ P ++ M LD
Sbjct: 28 PSRGKILISEPFLRDA-TFGRSVILLVDHTDEGSMGLVINKQLPLFLNDIIMEFKYLDEI 86
Query: 178 GTFSDRPLFFGGPLE-EGLFLV---SPKGGGDEVGK----SGVFEQVMEGLYFGTKETVG 229
PL+ GGP+ + LF + S G + K +G F+++ + + G K +
Sbjct: 87 ------PLYKGGPISTDTLFYLHTLSDIPGSISISKGLYLNGDFDEIKKYILQGNKIS-- 138
Query: 230 CAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWE 289
E RFF G GW+ EQLN EIR W V+ S + +++ +W
Sbjct: 139 -------------ECIRFFLGYSGWDSEQLNNEIRENTWLVSEEEKSYL-MKNNIKDMWR 184
Query: 290 ELLWLMGRR 298
L +G +
Sbjct: 185 TALEKLGSK 193
>gi|419967603|ref|ZP_14483491.1| hypothetical protein WSS_A35707 [Rhodococcus opacus M213]
gi|414567111|gb|EKT77916.1| hypothetical protein WSS_A35707 [Rhodococcus opacus M213]
Length = 201
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 17/186 (9%)
Query: 111 DKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMR 170
D+ A T G LL+++ L F RTVI ++ G G+++NRPS ++ +
Sbjct: 9 DRTASTEPVVRPGSLLVSSTDLVE-PAFRRTVIYVIEHNDAGSLGVVINRPSETAVHD-- 65
Query: 171 STVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE 226
VL + RP L+ GGP+ + L L + + G G +G+ +
Sbjct: 66 --VLPQWAPLAARPSTLYVGGPVKRDAALCLATLRTGAQPDGVAGLRRVHGRVVMVDLDS 123
Query: 227 TVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLG 286
A +V E R F G GW QL+ E++ W V + S + + +
Sbjct: 124 DPEVIAPLV-------EGVRIFAGYSGWTYGQLDSELQRDDWIVISALASDV-VAPARVD 175
Query: 287 LWEELL 292
+W ++L
Sbjct: 176 VWAQVL 181
>gi|111020619|ref|YP_703591.1| hypothetical protein RHA1_ro03630 [Rhodococcus jostii RHA1]
gi|397733657|ref|ZP_10500371.1| hypothetical protein JVH1_4841 [Rhodococcus sp. JVH1]
gi|118574354|sp|Q0SAK3.1|Y3630_RHOSR RecName: Full=UPF0301 protein RHA1_ro03630
gi|110820149|gb|ABG95433.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
gi|396930455|gb|EJI97650.1| hypothetical protein JVH1_4841 [Rhodococcus sp. JVH1]
Length = 201
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 17/186 (9%)
Query: 111 DKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMR 170
D+ A T G LL+++ L F RTVI ++ G G+++NRPS ++ +
Sbjct: 9 DRTASTEPVVRPGSLLVSSTDLVE-PAFRRTVIYVIEHNDAGSLGVVINRPSETAVHD-- 65
Query: 171 STVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE 226
VL + RP L+ GGP+ + L L + + G G +G+ +
Sbjct: 66 --VLPQWAPLAARPSALYVGGPVKRDAALCLATLRTGAQADGVAGLRRVHGRVVMVDLDS 123
Query: 227 TVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLG 286
A +V E R F G GW QL+ E++ W V + S + + +
Sbjct: 124 DPEVIAPLV-------EGVRIFAGYSGWTYGQLDSELQRDDWIVISALASDV-VAPARVD 175
Query: 287 LWEELL 292
+W ++L
Sbjct: 176 VWAQVL 181
>gi|418475179|ref|ZP_13044606.1| hypothetical protein SMCF_7635 [Streptomyces coelicoflavus ZG0656]
gi|371544200|gb|EHN72933.1| hypothetical protein SMCF_7635 [Streptomyces coelicoflavus ZG0656]
Length = 193
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + FER V+L+L + G G++LNRP+ + + ++ D AG
Sbjct: 12 GRLLVATPALADPN-FERAVVLLLDHDEEGSLGVVLNRPTPVDVGDILEDWADLAGEPG- 69
Query: 183 RPLFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+F GGP L+ L + V P G E G + +V + E A + +A
Sbjct: 70 -VVFQGGPVSLDSALGVAVVPGGASGERAPLG-WRRVHGAIGLVDLE----APPELLASA 123
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
VG R F G GW QL +E+ G W V P
Sbjct: 124 VGA--LRIFAGYAGWGPGQLEDELTEGAWYVVESEP 157
>gi|319760387|ref|YP_004124325.1| hypothetical protein BVAF_253 [Candidatus Blochmannia vafer str.
BVAF]
gi|318039101|gb|ADV33651.1| conserved hypothetical protein [Candidatus Blochmannia vafer str.
BVAF]
Length = 194
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 21/169 (12%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F+++VI I G GI++N+P ++++ ++ ST D + + P+F GG
Sbjct: 24 LFKKSVIYICEHNNTGAMGIVINKPLGKCTIETILNKLKITSTQRDPSIQL-NHPIFLGG 82
Query: 190 PL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRF 247
PL + G L +PK G + + E+ M ET+G + PE+
Sbjct: 83 PLLDDRGFILHTPKLGFNS--SINISEKAMITTSKDILETLGTPDQ--------PENILV 132
Query: 248 FDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G GW K QL +E+ W + +++ + + W + ++G
Sbjct: 133 ALGYSGWGKGQLEQELIENSWITVPANETIL-FHTPIINRWNDAAKILG 180
>gi|118472576|ref|YP_891116.1| hypothetical protein MSMEG_6921 [Mycobacterium smegmatis str. MC2
155]
gi|399991102|ref|YP_006571453.1| hypothetical protein MSMEI_6732 [Mycobacterium smegmatis str. MC2
155]
gi|441218740|ref|ZP_20977837.1| hypothetical protein D806_7002 [Mycobacterium smegmatis MKD8]
gi|166228833|sp|A0R7H8.1|Y6921_MYCS2 RecName: Full=UPF0301 protein MSMEG_6921/MSMEI_6732
gi|118173863|gb|ABK74759.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
155]
gi|399235665|gb|AFP43158.1| UPF0301 protein [Mycobacterium smegmatis str. MC2 155]
gi|440623541|gb|ELQ85416.1| hypothetical protein D806_7002 [Mycobacterium smegmatis MKD8]
Length = 201
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 75/188 (39%), Gaps = 21/188 (11%)
Query: 111 DKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMR 170
D A H G LL+A L F RTVI I+ G G+ILNRPS ++ +
Sbjct: 9 DFIAPAAHRVRPGTLLLANTDLLE-PTFRRTVIYIVEHNSGGTLGVILNRPSETAVYNVL 67
Query: 171 STVLDAAGTFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVF----EQVMEGLYFGT 224
A T + +F GGP+ + L L + + G G G+ VM L
Sbjct: 68 PQW--AEVTAKPKTMFIGGPVKRDSALCLATLRVGMQADGVDGLRHVQGRVVMVDLDADP 125
Query: 225 KETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGT 284
+E E R F G GW QL+ EI W V + PS + +E
Sbjct: 126 EELAPVI-----------EGVRIFAGYSGWTTGQLDGEIERDDWIVLSALPSDVLIEP-R 173
Query: 285 LGLWEELL 292
+ LW +L
Sbjct: 174 IDLWGRVL 181
>gi|384107150|ref|ZP_10008052.1| hypothetical protein W59_37703 [Rhodococcus imtechensis RKJ300]
gi|424859749|ref|ZP_18283731.1| hypothetical protein OPAG_07506 [Rhodococcus opacus PD630]
gi|432350152|ref|ZP_19593556.1| hypothetical protein Rwratislav_44926 [Rhodococcus wratislaviensis
IFP 2016]
gi|356661193|gb|EHI41525.1| hypothetical protein OPAG_07506 [Rhodococcus opacus PD630]
gi|383833085|gb|EID72554.1| hypothetical protein W59_37703 [Rhodococcus imtechensis RKJ300]
gi|430770491|gb|ELB86442.1| hypothetical protein Rwratislav_44926 [Rhodococcus wratislaviensis
IFP 2016]
Length = 201
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 17/186 (9%)
Query: 111 DKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMR 170
D+ A T G LL+++ L F RTVI ++ G G+++NRPS ++ +
Sbjct: 9 DRTASTEPVVRPGSLLVSSTDLVE-PAFRRTVIYVIEHNDAGSLGVVINRPSETAVHD-- 65
Query: 171 STVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE 226
VL + RP L+ GGP+ + L L + + G G +G+ +
Sbjct: 66 --VLPQWAPLAARPSALYVGGPVKRDAALCLATLRTGAQPDGVAGLRRVHGRVVMVDLDS 123
Query: 227 TVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLG 286
A +V E R F G GW QL+ E++ W V + S + + +
Sbjct: 124 DPEVIAPLV-------EGVRIFAGYSGWTYGQLDSELQRDDWIVISALASDV-VAPARVD 175
Query: 287 LWEELL 292
+W ++L
Sbjct: 176 VWAQVL 181
>gi|444912982|ref|ZP_21233139.1| UPF0301 protein YqgE [Cystobacter fuscus DSM 2262]
gi|444716395|gb|ELW57246.1| UPF0301 protein YqgE [Cystobacter fuscus DSM 2262]
Length = 181
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 86/176 (48%), Gaps = 19/176 (10%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM-RSTVLDAAGTFSDR 183
LL+A +L + F R+V+L+L G G+++NR + +++ ++ ++ L A S +
Sbjct: 8 LLVAMPQLTDSN-FRRSVVLMLEHGEAGSMGLVINRGASLTLGDLAKNQSLAIAPERSRQ 66
Query: 184 PLFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFG-TKETVGCAAEMVKRNAV 240
P+F GGP+E G L + ++V + +V+ GLY T +T+G ++K +
Sbjct: 67 PVFMGGPVENHRGFVLHN----NEQVTEK---HEVVPGLYLSLTLDTLG---PLLKDPSA 116
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
RF G W QL E+ +G W A S + LE LW+ L MG
Sbjct: 117 ---HLRFCLGYANWGPHQLESELASGAWLFAEASARPV-LEGDPGLLWDSTLKSMG 168
>gi|443627104|ref|ZP_21111504.1| putative UPF0301 protein [Streptomyces viridochromogenes Tue57]
gi|443339416|gb|ELS53658.1| putative UPF0301 protein [Streptomyces viridochromogenes Tue57]
Length = 190
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 77/172 (44%), Gaps = 12/172 (6%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + ++ D AG
Sbjct: 9 GRLLVATPALADPN-FDRAVVLLLDHDEEGSLGVVLNRPTPVDVGDILEGWADLAGEPG- 66
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGV--FEQVMEGLYFGTKETVGCAAEMVKRNAV 240
+F GGP+ L GD G+S + +V + E A + +AV
Sbjct: 67 -VVFQGGPVSLDSALGVAVIPGDAYGESAPLGWRRVHGAIGLVDLE----APPELLASAV 121
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
G R F G GW QL +E+ G W V P + S LW E+L
Sbjct: 122 G--SLRIFAGYAGWGPGQLEDELVEGAWYVVESEPGDVSSPSPER-LWREVL 170
>gi|404485033|ref|ZP_11020237.1| hypothetical protein HMPREF9448_00647 [Barnesiella intestinihominis
YIT 11860]
gi|404340038|gb|EJZ66469.1| hypothetical protein HMPREF9448_00647 [Barnesiella intestinihominis
YIT 11860]
Length = 195
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 76/187 (40%), Gaps = 15/187 (8%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ P +G LL+A LD F R VI + G G +LN P+ + E+ L+
Sbjct: 12 VMPPHRGALLVAEPFLD-EGCFRRAVICLAEYSEKGAVGFVLNSPTRYVLSEL----LEG 66
Query: 177 AGTFSDRPLFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
P+F GGP+ + LF + D G E V GL+ + +
Sbjct: 67 ENDIPSIPVFCGGPVGTDHLFFLH-----DIASLPGAVE-VSTGLF--ANGDFDMLLDFL 118
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLM 295
K ++ + +F G GW QL+ E++ W V S L + W E++ M
Sbjct: 119 KSDSTVQKHVKFLIGYSGWSAGQLDGELKQESWAVTTMSSPGDCLAAEGDAFWREIVKGM 178
Query: 296 GR-RKVW 301
G K+W
Sbjct: 179 GDGYKLW 185
>gi|302521510|ref|ZP_07273852.1| conserved hypothetical protein [Streptomyces sp. SPB78]
gi|302430405|gb|EFL02221.1| conserved hypothetical protein [Streptomyces sp. SPB78]
Length = 193
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F R V+L+L + G G++LNRP+ + + + +L+ G +
Sbjct: 12 GRLLVATPALADAN-FARAVVLVLDHDAEGTLGVVLNRPTPVGVDD----ILEGWGPLAG 66
Query: 183 RP--LFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
P +F GGP L+ L + V P G G + +V + ET +
Sbjct: 67 APGVVFQGGPVSLDSALGVAVVPGEPGARTSPLG-WRRVYGAIGLVDLET------PPEL 119
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
A R F G GW QL +E+ AG W V P I E LW E+L
Sbjct: 120 LAAALGALRIFAGYAGWGPGQLEDELEAGAWYVVDAEPGDISAEH-PEALWREVL 173
>gi|318056822|ref|ZP_07975545.1| hypothetical protein SSA3_02704 [Streptomyces sp. SA3_actG]
Length = 190
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F R V+L+L + G G++LNRP+ + + + +L+ G +
Sbjct: 9 GRLLVATPALADAN-FARAVVLVLDHDAEGTLGVVLNRPTPVGVDD----ILEGWGPLAG 63
Query: 183 RP--LFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
P +F GGP L+ L + V P G G + +V + ET +
Sbjct: 64 APGVVFQGGPVSLDSALGVAVVPGEPGARTSPLG-WRRVYGAIGLVDLET------PPEL 116
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
A R F G GW QL +E+ AG W V P I E LW E+L
Sbjct: 117 LAAALGALRIFAGYAGWGPGQLEDELEAGAWYVVDAEPGDISAEH-PEALWREVL 170
>gi|300723962|ref|YP_003713276.1| hypothetical protein XNC1_3104 [Xenorhabdus nematophila ATCC 19061]
gi|297630493|emb|CBJ91158.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061]
Length = 187
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 71/181 (39%), Gaps = 22/181 (12%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD-- 182
LIA L + F R+V+ I + G G+++N+P E LD A D
Sbjct: 7 FLIAMPSLSDPY-FNRSVVYICEHDQNGAMGLVINKPIAQVSIESILQKLDIAPEDRDKA 65
Query: 183 ----RPLFFGGPL--EEGLFLVSPKGG-GDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
RP+ GGPL E G L +P+ G G + S Q M E +G +
Sbjct: 66 INLNRPVMAGGPLSEEHGFILHTPQSGFGSSIQISA---QTMITTSKDMLEALGTPRQ-- 120
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLM 295
P++ G WE QL +EI W + PS+I + W E L+
Sbjct: 121 ------PKNILMTLGYASWETGQLEKEIMENSWLTVSAEPSII-FNTPIADRWHEAAALL 173
Query: 296 G 296
G
Sbjct: 174 G 174
>gi|296268909|ref|YP_003651541.1| hypothetical protein Tbis_0924 [Thermobispora bispora DSM 43833]
gi|296091696|gb|ADG87648.1| protein of unknown function DUF179 [Thermobispora bispora DSM
43833]
Length = 193
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSM-EPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
G LL+AT L+ + F R+V+LIL E G G+ILNRPS +++ + VL +
Sbjct: 11 GRLLVATPLLEDPN-FRRSVVLILEHDEDGGTLGVILNRPSEIAVHQ----VLPSWDALV 65
Query: 182 DRP--LFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
P LF GGP++ L L + G + +G + Q GT + + E++
Sbjct: 66 TGPSVLFQGGPVQTDSALALAAVMSGDEPLGWRRL--QGKTSTRLGTVD-LDAPPEILAG 122
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
R F G GW QL EIR G W V P
Sbjct: 123 EIT---QMRIFAGYAGWAAGQLESEIREGAWYVVDSEP 157
>gi|397680867|ref|YP_006522402.1| hypothetical protein MYCMA_2668 [Mycobacterium massiliense str. GO
06]
gi|420866418|ref|ZP_15329807.1| hypothetical protein MA4S0303_4788 [Mycobacterium abscessus
4S-0303]
gi|420871209|ref|ZP_15334591.1| hypothetical protein MA4S0726RA_4723 [Mycobacterium abscessus
4S-0726-RA]
gi|420919058|ref|ZP_15382361.1| hypothetical protein MA6G0125S_5170 [Mycobacterium abscessus
6G-0125-S]
gi|420924228|ref|ZP_15387524.1| hypothetical protein MA6G0728S_4860 [Mycobacterium abscessus
6G-0728-S]
gi|420934113|ref|ZP_15397386.1| hypothetical protein MM1S1510930_4953 [Mycobacterium massiliense
1S-151-0930]
gi|392065134|gb|EIT90983.1| hypothetical protein MA4S0303_4788 [Mycobacterium abscessus
4S-0303]
gi|392070679|gb|EIT96526.1| hypothetical protein MA4S0726RA_4723 [Mycobacterium abscessus
4S-0726-RA]
gi|392111949|gb|EIU37719.1| hypothetical protein MA6G0125S_5170 [Mycobacterium abscessus
6G-0125-S]
gi|392128881|gb|EIU54631.1| hypothetical protein MA6G0728S_4860 [Mycobacterium abscessus
6G-0728-S]
gi|392132525|gb|EIU58270.1| hypothetical protein MM1S1510930_4953 [Mycobacterium massiliense
1S-151-0930]
gi|395459132|gb|AFN64795.1| UPF0301 protein [Mycobacterium massiliense str. GO 06]
Length = 191
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 77/184 (41%), Gaps = 27/184 (14%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
H G LLIA L F R+VI I+ G G++LNRPS ++ + A
Sbjct: 6 HRLRAGTLLIANTNLFE-PTFRRSVIFIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLA 64
Query: 178 GTFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
G + +F GGP+ + L L + + G V GV G + G A MV
Sbjct: 65 G--KPKTMFVGGPVKRDAALCLATLRAG---VSIDGV---------KGLRHVAGRMA-MV 109
Query: 236 KRNAVGPED-------FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW 288
+A PED R F G GW QL E+ W V + PS + L + LW
Sbjct: 110 DLDA-EPEDIAPLVEGIRVFAGYSGWTIGQLEGEVERDDWIVLSALPSDV-LTDASEDLW 167
Query: 289 EELL 292
++L
Sbjct: 168 AKVL 171
>gi|336416318|ref|ZP_08596653.1| hypothetical protein HMPREF1017_03761 [Bacteroides ovatus
3_8_47FAA]
gi|423286957|ref|ZP_17265808.1| UPF0301 protein [Bacteroides ovatus CL02T12C04]
gi|423298023|ref|ZP_17276083.1| UPF0301 protein [Bacteroides ovatus CL03T12C18]
gi|335938735|gb|EGN00619.1| hypothetical protein HMPREF1017_03761 [Bacteroides ovatus
3_8_47FAA]
gi|392664660|gb|EIY58198.1| UPF0301 protein [Bacteroides ovatus CL03T12C18]
gi|392673789|gb|EIY67244.1| UPF0301 protein [Bacteroides ovatus CL02T12C04]
Length = 207
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 33/189 (17%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR--PSLMSIKEMRSTVLDAA 177
P +G +LI+ L F R+VIL++ G G+++N+ P ++ M LD
Sbjct: 28 PSRGRILISEPFLRDA-TFGRSVILLVDHTDEGSMGLVINKQLPLFLNDIIMEFKYLDEI 86
Query: 178 GTFSDRPLFFGGPL-EEGLFLV---SPKGGGDEVGK----SGVFEQVMEGLYFGTKETVG 229
PL+ GGP+ + LF + S G + K +G F+++ + + G K +
Sbjct: 87 ------PLYKGGPIATDTLFYLHTLSDIPGSISISKGLYLNGDFDEIKKYILQGNKIS-- 138
Query: 230 CAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWE 289
E RFF G GW+ EQLN EIR W V+ S + +++ +W
Sbjct: 139 -------------ECIRFFLGYSGWDSEQLNNEIRENTWLVSEEEKSYL-MKNNIKDMWR 184
Query: 290 ELLWLMGRR 298
L +G +
Sbjct: 185 TALEKLGSK 193
>gi|294807760|ref|ZP_06766553.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
gi|345511582|ref|ZP_08791122.1| hypothetical protein BSAG_01489 [Bacteroides sp. D1]
gi|294445196|gb|EFG13870.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
gi|345454095|gb|EEO49778.2| hypothetical protein BSAG_01489 [Bacteroides sp. D1]
Length = 207
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 33/189 (17%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR--PSLMSIKEMRSTVLDAA 177
P +G +LI+ L F R+VIL++ G G+++N+ P ++ M LD
Sbjct: 28 PSRGRILISEPFLRDA-TFGRSVILLVDHTDEGSMGLVINKQLPLFLNDIIMEFKYLDEI 86
Query: 178 GTFSDRPLFFGGPL-EEGLFLV---SPKGGGDEVGK----SGVFEQVMEGLYFGTKETVG 229
PL+ GGP+ + LF + S G + K +G F+++ + + G K +
Sbjct: 87 ------PLYKGGPIATDTLFYLHTLSDIPGSISISKGLYLNGDFDEIKKYILQGNKIS-- 138
Query: 230 CAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWE 289
E RFF G GW+ EQLN EIR W V+ S + +++ +W
Sbjct: 139 -------------ECIRFFLGYSGWDSEQLNNEIRENTWLVSEEEKSYL-MKNNIKDMWR 184
Query: 290 ELLWLMGRR 298
L +G +
Sbjct: 185 TALEKLGSK 193
>gi|171060632|ref|YP_001792981.1| hypothetical protein Lcho_3962 [Leptothrix cholodnii SP-6]
gi|170778077|gb|ACB36216.1| protein of unknown function DUF179 [Leptothrix cholodnii SP-6]
Length = 193
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 72/169 (42%), Gaps = 17/169 (10%)
Query: 120 PEKGCL------LIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV 173
PE G + LIA + H F V+ + G G+++NRP + +K + V
Sbjct: 2 PEAGAINLTNQFLIAMPGMMDDH-FAGAVVYLCEHTERGALGLVINRPIDIKLKNLFERV 60
Query: 174 ---LDAAGTFSDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVG 229
LD A +D P++FGGP++ E F++ P+ DE G + GL T V
Sbjct: 61 DLSLDRA-DLADEPVYFGGPVQTERGFVLHPRNL-DEPGSYNSTLSIPGGLEMTTSRDVL 118
Query: 230 CAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
A + GP+ G GW+ QL EE+ W P +I
Sbjct: 119 EALS----HGAGPKKVLITLGYAGWDAGQLEEELGRNGWLNVDADPDII 163
>gi|335420461|ref|ZP_08551499.1| hypothetical protein SSPSH_07256 [Salinisphaera shabanensis E1L3A]
gi|334894820|gb|EGM33005.1| hypothetical protein SSPSH_07256 [Salinisphaera shabanensis E1L3A]
Length = 171
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 12/143 (8%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPL--EEGL 195
F +V I G G+++N+PS +++++M + + A +++P+++GGP+ E G
Sbjct: 9 FADSVTFIAEHNDDGAMGLVINKPSDLTVRDMLAHMDIEAHVPAEQPVYWGGPVQTERGF 68
Query: 196 FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWE 255
L +G + K G GL T V A N GP ++ G GW
Sbjct: 69 VLHRDEGRWESTLKVG------GGLALTTSRDVLEAI----GNGFGPSEYLITLGYAGWG 118
Query: 256 KEQLNEEIRAGYWTVAACSPSVI 278
+ QL +E+ A W S +I
Sbjct: 119 EGQLEDEMLANSWLNTPASDQII 141
>gi|445414080|ref|ZP_21433805.1| hypothetical protein ACINWC743_0328 [Acinetobacter sp. WC-743]
gi|444764899|gb|ELW89204.1| hypothetical protein ACINWC743_0328 [Acinetobacter sp. WC-743]
Length = 184
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 64/149 (42%), Gaps = 14/149 (9%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
CL+ + D F TVI I + G GII+NRPS + +KE+ + + AA
Sbjct: 10 CLIAPPDLADD--FFANTVIYIARHDEDGAQGIIINRPSGIQVKELLNDLDIAADNVHPH 67
Query: 184 PLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ GGPL E G L + G S + V E L T + + A + VG
Sbjct: 68 EVLQGGPLRPEAGFVLHT----GQPTWHSSI--AVGENLCITTSKDILDA--IAHNEGVG 119
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270
++ G W K QL EEI G W +
Sbjct: 120 R--YQIALGYASWTKNQLEEEIARGDWLI 146
>gi|92112193|ref|YP_572121.1| hypothetical protein Csal_0058 [Chromohalobacter salexigens DSM
3043]
gi|119391231|sp|Q1R1I6.1|Y058_CHRSD RecName: Full=UPF0301 protein Csal_0058
gi|91795283|gb|ABE57422.1| protein of unknown function DUF179 [Chromohalobacter salexigens DSM
3043]
Length = 185
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAAGT- 179
K L+A LD + F+ T+ + + G G+I+NRP +++ + + LDAA
Sbjct: 5 KHHFLLAMPHLDDPN-FKGTLTYLCDHDENGTMGVIVNRPMELTLDALLEQLELDAAECP 63
Query: 180 FSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR-- 237
+ P+ +GGP+ + + +G S QV + + T + +M+K
Sbjct: 64 CREMPVHYGGPVHKDRGFILHRGSSLPWDSS---LQVADDIALTT------SMDMLKAIA 114
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
N GPEDF GC W+ QL +E++ W S++
Sbjct: 115 NGQGPEDFIVCLGCAAWQAGQLEDELKQNTWLTVEGDASIL 155
>gi|429202636|ref|ZP_19194011.1| hypothetical protein STRIP9103_03521 [Streptomyces ipomoeae 91-03]
gi|428661826|gb|EKX61307.1| hypothetical protein STRIP9103_03521 [Streptomyces ipomoeae 91-03]
Length = 190
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 16/174 (9%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + + +L+ +
Sbjct: 9 GRLLVATPALADPN-FDRAVVLLLDHDEKGSLGVVLNRPTPVDVGD----ILEGWAALAG 63
Query: 183 RP--LFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
P +F GGP L+ L + GGG + +V + E A + +
Sbjct: 64 EPGVIFQGGPVSLDSALGVAVIPGGGSVDRAPLGWRRVHGAIGLVDLE----APPELLAS 119
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
A+G R F G GW QL +E+ G W V P + S LW E+L
Sbjct: 120 ALG--SLRIFAGYAGWGPGQLEDELVEGAWYVVESEPGDVSSPSPER-LWREVL 170
>gi|255319726|ref|ZP_05360934.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
gi|262379993|ref|ZP_06073148.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|421464374|ref|ZP_15913064.1| hypothetical protein ACINWCA157_2267 [Acinetobacter radioresistens
WC-A-157]
gi|421856642|ref|ZP_16289005.1| hypothetical protein ACRAD_24_00330 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|255303255|gb|EET82464.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
gi|262298187|gb|EEY86101.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|400205127|gb|EJO36108.1| hypothetical protein ACINWCA157_2267 [Acinetobacter radioresistens
WC-A-157]
gi|403187933|dbj|GAB75206.1| hypothetical protein ACRAD_24_00330 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
Length = 184
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 73/180 (40%), Gaps = 15/180 (8%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
CL+ E D F TVI + + G GII+NRP+ + IKE+ + + A
Sbjct: 10 CLIAPPEIADD--FFAHTVIYLARHDEDGAQGIIINRPAGIQIKELLNDLEIDADNVQPH 67
Query: 184 PLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ GGPL E G L + G V S + + E + T + + + + N G
Sbjct: 68 DVLQGGPLRPEAGFVLHT----GQPVWHSSI--AIGENVCITTSKDI---LDAIAHNE-G 117
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRRKVW 301
+ ++ G W K QL EEI G W + +I W+ MG + W
Sbjct: 118 VDRYQIALGYASWSKNQLEEEIARGDWLICDADMDLI-FNLPYDDRWDAAYKKMGLDRTW 176
>gi|254515814|ref|ZP_05127874.1| conserved hypothetical protein [gamma proteobacterium NOR5-3]
gi|219675536|gb|EED31902.1| conserved hypothetical protein [gamma proteobacterium NOR5-3]
Length = 208
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 74/189 (39%), Gaps = 26/189 (13%)
Query: 104 PPQNSLGDKWAH--------TIHEPEKGCL----LIATEKLDGVHIFERTVILILSMEPM 151
PP NS W H + CL L+A LD +F ++ +
Sbjct: 2 PPANS---TWQHRTALAGENILKVSSSDCLRDHFLLAMPGLD-AGLFSGSITYLCEHGEA 57
Query: 152 GPSGIILNRPSLMSIKEMRSTV-LDAAGTFSDRPLFFGGPLE-EGLFLVSPKGGGDEVGK 209
G G+++N+P +S+ E+ + + A F D+P+ GGP++ + F++ P GG
Sbjct: 58 GAMGLVINQPLDLSLGEIFDHLDIAADAHFRDQPVLAGGPVQIDHGFVLHPSGGKRWDSS 117
Query: 210 SGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWT 269
V ++V + + C GP DF G GW QL EEI W
Sbjct: 118 LRVTDEVQLTTSRDVLKAIACGE--------GPRDFVVTLGYAGWSAGQLEEEIANNSWL 169
Query: 270 VAACSPSVI 278
+I
Sbjct: 170 TLPADKRII 178
>gi|392419066|ref|YP_006455671.1| putative transcriptional regulator [Mycobacterium chubuense NBB4]
gi|390618842|gb|AFM19992.1| putative transcriptional regulator [Mycobacterium chubuense NBB4]
Length = 202
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 73/176 (41%), Gaps = 17/176 (9%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
G LL+A L F R+VI ++ G G++LNRPS ++ VL
Sbjct: 20 RSGTLLLANTDLLE-PTFRRSVIYVVEHNDGGTLGVVLNRPSETAVY----NVLPQWAKL 74
Query: 181 SDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
+ +P +F GGP+ + L L + + G D G +G+ + A +V
Sbjct: 75 ATKPKTMFIGGPVKRDAALCLGTLRVGADARGVAGLRHVQGRMVMVDLDADPDSVAPVV- 133
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
E R F G GW QL EI W V + PS + +E + LW +L
Sbjct: 134 ------EGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVEP-RVDLWARVL 182
>gi|408531544|emb|CCK29718.1| UPF0301 protein [Streptomyces davawensis JCM 4913]
Length = 193
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 18/175 (10%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + + +L+ G +
Sbjct: 12 GRLLVATPALADPN-FDRAVVLLLDHDEEGSLGVVLNRPTPVDVGD----ILEGWGELAG 66
Query: 183 RP--LFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
P +F GGP L+ L + V P G E G + +V + ET E++
Sbjct: 67 EPGVVFQGGPVSLDSALGVAVIPGGASGESAPLG-WRRVHGAIGLVDLET---PPELLA- 121
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+A+G R F G GW QL +E+ G W V P + + LW E+L
Sbjct: 122 SALG--SLRIFAGYAGWGPGQLEDELVEGAWYVVESEPGDVSSPAPER-LWREVL 173
>gi|403050355|ref|ZP_10904839.1| hypothetical protein AberL1_02148 [Acinetobacter bereziniae LMG
1003]
Length = 184
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 64/149 (42%), Gaps = 14/149 (9%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
CL+ + D F TVI I + G GII+NRPS + +KE+ + + AA
Sbjct: 10 CLIAPPDLADD--FFANTVIYIARHDGNGAQGIIINRPSGIQVKELLNDLDIAADNVHPH 67
Query: 184 PLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ GGPL E G L + G S + V E L T + + A + VG
Sbjct: 68 EVLQGGPLRPEAGFVLHT----GQPTWHSSI--AVGENLCITTSKDILDA--IAHNEGVG 119
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270
++ G W K QL EEI G W +
Sbjct: 120 R--YQIALGYASWTKNQLEEEIARGDWLI 146
>gi|347538293|ref|YP_004845717.1| hypothetical protein NH8B_0468 [Pseudogulbenkiania sp. NH8B]
gi|345641470|dbj|BAK75303.1| protein of unknown function [Pseudogulbenkiania sp. NH8B]
Length = 186
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 16/147 (10%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT---FSDRPLFFGGPL-- 191
+F R+++ + G GII+N+PS +++ ++ + D T P++FGGP+
Sbjct: 21 LFARSLVYLCEHGEHGAMGIIVNKPSGIAMAQLFDQI-DLPLTEEALQGEPVYFGGPVQP 79
Query: 192 EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGC 251
E G L P VG V + L T + V A V N GP+ G
Sbjct: 80 ERGFVLHMP------VGNWQTSLLVTDELALTTSKDVLVA---VSENK-GPDTMMVSLGY 129
Query: 252 CGWEKEQLNEEIRAGYWTVAACSPSVI 278
GW QL EEIR W + P +I
Sbjct: 130 SGWSSGQLEEEIRNNGWLTVSADPHII 156
>gi|404425076|ref|ZP_11006578.1| hypothetical protein MFORT_30742 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403649427|gb|EJZ04805.1| hypothetical protein MFORT_30742 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 201
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 82/190 (43%), Gaps = 25/190 (13%)
Query: 111 DKWAHTIHEPEKGCLLIA-TEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM 169
D A H G LL+A T+ L+ F R+VI I+ G G++LNRPS ++
Sbjct: 9 DFIAPAAHRVRPGTLLLANTDLLEPT--FRRSVIYIVEHNAGGTLGVVLNRPSETAVYN- 65
Query: 170 RSTVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSG---VFEQVMEGLYF 222
VL + +P +F GGP+ + L L + + G G G V +V+
Sbjct: 66 ---VLPQWAKLATKPKTMFIGGPVKRDSALCLATLRVGMQADGVPGLRHVQGRVVMVDLD 122
Query: 223 GTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLES 282
+T+ A E V R F G GW QL+ EI W V + PS + +E
Sbjct: 123 ADPDTLAPAIEGV----------RIFAGYSGWTIGQLDGEIERDDWIVLSALPSDVLIEP 172
Query: 283 GTLGLWEELL 292
+ LW +L
Sbjct: 173 -RIDLWGRVL 181
>gi|414582415|ref|ZP_11439555.1| hypothetical protein MA5S1215_4284 [Mycobacterium abscessus
5S-1215]
gi|418423137|ref|ZP_12996306.1| hypothetical protein MBOL_48520 [Mycobacterium abscessus subsp.
bolletii BD]
gi|420878817|ref|ZP_15342184.1| hypothetical protein MA5S0304_4330 [Mycobacterium abscessus
5S-0304]
gi|420886911|ref|ZP_15350271.1| hypothetical protein MA5S0421_4565 [Mycobacterium abscessus
5S-0421]
gi|420892316|ref|ZP_15355663.1| hypothetical protein MA5S0422_5506 [Mycobacterium abscessus
5S-0422]
gi|420896972|ref|ZP_15360311.1| hypothetical protein MA5S0708_4257 [Mycobacterium abscessus
5S-0708]
gi|420901265|ref|ZP_15364596.1| hypothetical protein MA5S0817_3879 [Mycobacterium abscessus
5S-0817]
gi|420904948|ref|ZP_15368266.1| hypothetical protein MA5S1212_4014 [Mycobacterium abscessus
5S-1212]
gi|420974783|ref|ZP_15437973.1| hypothetical protein MA5S0921_5291 [Mycobacterium abscessus
5S-0921]
gi|363993112|gb|EHM14338.1| hypothetical protein MBOL_48520 [Mycobacterium abscessus subsp.
bolletii BD]
gi|392079576|gb|EIU05403.1| hypothetical protein MA5S0422_5506 [Mycobacterium abscessus
5S-0422]
gi|392082674|gb|EIU08500.1| hypothetical protein MA5S0421_4565 [Mycobacterium abscessus
5S-0421]
gi|392083726|gb|EIU09551.1| hypothetical protein MA5S0304_4330 [Mycobacterium abscessus
5S-0304]
gi|392096284|gb|EIU22079.1| hypothetical protein MA5S0708_4257 [Mycobacterium abscessus
5S-0708]
gi|392098626|gb|EIU24420.1| hypothetical protein MA5S0817_3879 [Mycobacterium abscessus
5S-0817]
gi|392102852|gb|EIU28638.1| hypothetical protein MA5S1212_4014 [Mycobacterium abscessus
5S-1212]
gi|392117567|gb|EIU43335.1| hypothetical protein MA5S1215_4284 [Mycobacterium abscessus
5S-1215]
gi|392159901|gb|EIU85594.1| hypothetical protein MA5S0921_5291 [Mycobacterium abscessus
5S-0921]
Length = 208
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 77/184 (41%), Gaps = 27/184 (14%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
H G LLIA L F R+VI I+ G G++LNRPS ++ + A
Sbjct: 23 HRLRAGTLLIANTNL-FEPTFRRSVIFIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLA 81
Query: 178 GTFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
G + +F GGP+ + L L + + G V GV G + G A MV
Sbjct: 82 G--KPKTMFIGGPVKRDAALCLATLRAG---VSIDGV---------KGLRHVAGRMA-MV 126
Query: 236 KRNAVGPED-------FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW 288
+A PED R F G GW QL E+ W V + PS + L + LW
Sbjct: 127 DLDA-EPEDIAPLVEGIRVFAGYSGWTIGQLEGEVERDDWIVLSALPSDV-LTDASEDLW 184
Query: 289 EELL 292
++L
Sbjct: 185 AKVL 188
>gi|324998735|ref|ZP_08119847.1| hypothetical protein PseP1_08219 [Pseudonocardia sp. P1]
Length = 198
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 15/173 (8%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+A L G F R+V+ ++ P G G++LNRP +++++ + AG SD
Sbjct: 18 GSLLVAAPGL-GDPNFARSVVYMIEHRPHGSLGVVLNRPGPAAVRDV---LPRWAGVTSD 73
Query: 183 R-PLFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+F GGP+E L L + + G G SG+ V + ++ A + R
Sbjct: 74 PGSMFVGGPVEAQTALCLAALRTGESGRGLSGLMP-VRPPVQLVDLDS--DPARLAPRL- 129
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
R F G GW+ QL EI G W V P + L LWE +L
Sbjct: 130 ---RGLRIFAGYSGWDAGQLGGEIARGDWFVVPGLPDDL-LTVAHDRLWERVL 178
>gi|113460158|ref|YP_718214.1| hypothetical protein HS_0009 [Haemophilus somnus 129PT]
gi|123031119|sp|Q0I1B4.1|Y009_HAES1 RecName: Full=UPF0301 protein HS_0009
gi|112822201|gb|ABI24290.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 187
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 19/161 (11%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM---RSTVLDAAGTFS 181
LIA L+ + F+R+V+ I G G++L + + +SI E+ + ++ +S
Sbjct: 7 FLIAMPHLEDEN-FQRSVVYICENNEQGSMGLVLTQATDLSIAELCAKMNFMMADEREYS 65
Query: 182 DRPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR-- 237
D+ + GGP LE G L K E S +V + +Y T +A+++
Sbjct: 66 DKLVLLGGPVNLEHGFIL--HKKTAQEFQHSY---KVTDQIYLTT------SADIINTFG 114
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
A PE + GC WE QL EI W V ++
Sbjct: 115 TAQSPEKYLVTLGCARWEPNQLENEIANNDWLVVPADEDIL 155
>gi|25029483|ref|NP_739537.1| hypothetical protein CE2927 [Corynebacterium efficiens YS-314]
gi|23494772|dbj|BAC19737.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length = 217
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 21/181 (11%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
+E G LL+A L F R+VIL++ G+ L S +++ + VL
Sbjct: 32 NEVAPGSLLVAAPDLASPE-FSRSVILVIEHSHATTFGVNLASRSDLAV----ANVLPEW 86
Query: 178 GTFSDRP--LFFGGPLEE----GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCA 231
+ +P L+ GGPL + GL + P G ++ S F ++ L +
Sbjct: 87 TELTAKPQALYIGGPLSQQAVVGLGVTKP---GVDIESSTKFNKLANRL---VHVDLRVT 140
Query: 232 AEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEEL 291
+ V+ + G RFF G W QLN+EI G W VA PS + L G + +W ++
Sbjct: 141 PDEVRDDLEG---MRFFAGYAEWAPGQLNDEIEQGDWYVAPALPSDV-LAPGRVDVWGDV 196
Query: 292 L 292
+
Sbjct: 197 M 197
>gi|225011860|ref|ZP_03702298.1| protein of unknown function DUF179 [Flavobacteria bacterium
MS024-2A]
gi|225004363|gb|EEG42335.1| protein of unknown function DUF179 [Flavobacteria bacterium
MS024-2A]
Length = 181
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LIAT + G F+R+V+L++ + G G ILN+ ++ E V+D G
Sbjct: 4 GKFLIATPSIIGDANFQRSVVLLVDQKESGTVGFILNKKLDYTLDE----VMD--GIAIK 57
Query: 183 RPLFFGGPLEE-GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
P++FGGP+E+ LF + D + S + + + G +TV E++ +
Sbjct: 58 VPVYFGGPVEQDSLFFIHR--AADLIPNSIPINK--DFYWSGDYKTV---IELINSKKLE 110
Query: 242 PEDFRFFDGCCGWEKEQL 259
+ RFF G GW ++QL
Sbjct: 111 EDQIRFFLGYTGWGEKQL 128
>gi|84500238|ref|ZP_00998504.1| hypothetical protein OB2597_09859 [Oceanicola batsensis HTCC2597]
gi|84392172|gb|EAQ04440.1| hypothetical protein OB2597_09859 [Oceanicola batsensis HTCC2597]
Length = 193
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 18/155 (11%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILN-RPSLMSIKEMRSTV-LDAAGT 179
G +L+A + G F R+VILI + G G+++N R +++ ++ + ++ A
Sbjct: 13 SGHVLMAMPDM-GDDRFTRSVILICAHSEDGAMGLMVNLRTDDVALSDLAEQLDMETAPQ 71
Query: 180 FSDRPLFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
F DRPL GGP+E+ G L SP + + + ++ ++ ++++
Sbjct: 72 FHDRPLHSGGPVEQERGFVLHSPD-----------YHSAISTMAVTSEISLTGTLDVIEE 120
Query: 238 --NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270
N GPE G CGW QL E+ W V
Sbjct: 121 LANGKGPEHALVMLGYCGWGPGQLESELARNAWLV 155
>gi|262204631|ref|YP_003275839.1| hypothetical protein Gbro_4833 [Gordonia bronchialis DSM 43247]
gi|262087978|gb|ACY23946.1| protein of unknown function DUF179 [Gordonia bronchialis DSM 43247]
Length = 225
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 31/193 (16%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
H G +L+A+ L F R+V+ I+ G G+++NR S ++ + D A
Sbjct: 40 HRVRPGTVLLASTDLIE-PTFARSVVYIIEHNDAGSLGVVINRMSQTAVHNLLPQWTDLA 98
Query: 178 GTFSDRPLFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
S R L+ GGP+++ L L + G D G F V +V
Sbjct: 99 A--SPRALYVGGPVKQDAALCLGIARPGADITG-------------FPALRPVDGRVVLV 143
Query: 236 KRNAVGPEDF-------RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW 288
+A P+D R F G GW QL+ E+ W +A+ P + L + +W
Sbjct: 144 DLDA-DPDDLTDVLEGVRIFAGYAGWGIGQLDGELERDSWLLASALPRDV-LAPPAVDVW 201
Query: 289 EELLWLMGRRKVW 301
++L RR+ W
Sbjct: 202 SDIL----RRQPW 210
>gi|254293402|ref|YP_003059425.1| hypothetical protein Hbal_1034 [Hirschia baltica ATCC 49814]
gi|254041933|gb|ACT58728.1| protein of unknown function DUF179 [Hirschia baltica ATCC 49814]
Length = 185
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 67/160 (41%), Gaps = 13/160 (8%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRP-SLMSIKEMRSTVLDAAGTF 180
KG LLIA L +FER VIL+ + GI++N + + E+ +
Sbjct: 6 KGKLLIALPTLKD-PLFERAVILLCAHNEEHAMGIVINHAMTDIGCNELFDQLGMQNAPS 64
Query: 181 SDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
+ PL GGP+ E G L S D+ G +M+G+ E V A +
Sbjct: 65 TQVPLLLGGPVCPERGFVLHS-----DDYDAEGATASIMDGVCLTATEDVLLAL----AS 115
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE G GW + QL EEI W VA S ++I
Sbjct: 116 DTPPEKAVLALGYAGWGEGQLEEEIMENVWLVADASEALI 155
>gi|238650348|ref|YP_002916200.1| hypothetical protein RPR_01165 [Rickettsia peacockii str. Rustic]
gi|259645733|sp|C4K0Q1.1|Y1165_RICPU RecName: Full=UPF0301 protein RPR_01165
gi|238624446|gb|ACR47152.1| hypothetical protein RPR_01165 [Rickettsia peacockii str. Rustic]
Length = 189
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 72/175 (41%), Gaps = 21/175 (12%)
Query: 109 LGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR-PSLMSIK 167
+ DK H + G L+AT + I+ +++I +LS G G+I NR + + +K
Sbjct: 1 MSDKIFHNL----SGKTLVATPHVITKGIYHKSLIYMLSHTEEGAIGLIFNRLVNHIDLK 56
Query: 168 EMRSTVLDAAGTFSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
D T P++ GGP+E +G FL S + + L F
Sbjct: 57 SFFKIKNDEITTPVMVPIYLGGPVEHEKGFFLHSSDYNKNLL------------LDFHND 104
Query: 226 ETVGCAAEMVKRNAVG--PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
V E+ + A G P++ F G W+ QL EE+ W V C+ I
Sbjct: 105 LAVSSNLEISEDIAFGKGPKNSLFIIGYTAWKPGQLEEELETNLWLVMDCNKEFI 159
>gi|157827916|ref|YP_001494158.1| hypothetical protein A1G_00270 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165932606|ref|YP_001649395.1| hypothetical protein RrIowa_0061 [Rickettsia rickettsii str. Iowa]
gi|378720717|ref|YP_005285604.1| hypothetical protein RPL_00265 [Rickettsia rickettsii str.
Colombia]
gi|378722068|ref|YP_005286954.1| hypothetical protein RPO_00265 [Rickettsia rickettsii str. Arizona]
gi|378723427|ref|YP_005288311.1| hypothetical protein RPM_00270 [Rickettsia rickettsii str. Hauke]
gi|379017020|ref|YP_005293255.1| hypothetical protein RPN_06625 [Rickettsia rickettsii str. Brazil]
gi|379017217|ref|YP_005293451.1| hypothetical protein RPJ_00270 [Rickettsia rickettsii str. Hino]
gi|379018549|ref|YP_005294783.1| hypothetical protein RPK_00260 [Rickettsia rickettsii str. Hlp#2]
gi|379711787|ref|YP_005300126.1| hypothetical protein RSA_00255 [Rickettsia philipii str. 364D]
gi|166228434|sp|A8GQH5.1|Y270_RICRS RecName: Full=UPF0301 protein A1G_00270
gi|189038530|sp|B0BVW3.1|Y061_RICRO RecName: Full=UPF0301 protein RrIowa_0061
gi|157800397|gb|ABV75650.1| hypothetical protein A1G_00270 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165907693|gb|ABY71989.1| transcriptional regulator [Rickettsia rickettsii str. Iowa]
gi|376325544|gb|AFB22784.1| hypothetical protein RPN_06625 [Rickettsia rickettsii str. Brazil]
gi|376325741|gb|AFB22980.1| hypothetical protein RPL_00265 [Rickettsia rickettsii str.
Colombia]
gi|376327092|gb|AFB24330.1| hypothetical protein RPO_00265 [Rickettsia rickettsii str. Arizona]
gi|376328432|gb|AFB25669.1| hypothetical protein RSA_00255 [Rickettsia philipii str. 364D]
gi|376329782|gb|AFB27018.1| hypothetical protein RPJ_00270 [Rickettsia rickettsii str. Hino]
gi|376331129|gb|AFB28363.1| hypothetical protein RPK_00260 [Rickettsia rickettsii str. Hlp#2]
gi|376332442|gb|AFB29675.1| hypothetical protein RPM_00270 [Rickettsia rickettsii str. Hauke]
Length = 189
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 72/175 (41%), Gaps = 21/175 (12%)
Query: 109 LGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR-PSLMSIK 167
+ DK H + G L+AT + I+ +++I +LS G G+I NR + + +K
Sbjct: 1 MSDKIFHNL----SGKTLVATPHVITKGIYHKSLIYMLSHTEEGAIGLIFNRLVNHIDLK 56
Query: 168 EMRSTVLDAAGTFSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
D T P++ GGP+E +G FL S + + L F
Sbjct: 57 SFFKIKNDEITTPVMVPIYLGGPVEHEKGFFLHSSDYNKNLL------------LDFHND 104
Query: 226 ETVGCAAEMVKRNAVG--PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
V E+ + A G P++ F G W+ QL EE+ W V C+ I
Sbjct: 105 LAVSSNLEISEDIAFGKGPKNSLFIVGYTAWKPGQLEEELETNLWLVMDCNKEFI 159
>gi|337755380|ref|YP_004647891.1| hypothetical protein F7308_1365 [Francisella sp. TX077308]
gi|336446985|gb|AEI36291.1| UPF0301 protein YqgE [Francisella sp. TX077308]
Length = 193
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAA 177
+ K +L+AT + IF ++VI + + G G+I+N+P ++K++ + +
Sbjct: 3 QNHKSEILLATPLIKDDAIFTKSVIYLCQNDRHGAMGLIINKPLSDTLKDVFEELEIPHN 62
Query: 178 GTFS---DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
TF+ D PL+ GGP+ ++ G + + EGL + + ++
Sbjct: 63 NTFNEILDYPLYMGGPISPHKIMILHTTNGRNYSSTIKLD---EGL------AITASMDI 113
Query: 235 VKR--NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAA 272
++ N + PE F G W +QL +EI++ W V +
Sbjct: 114 LEDLANNILPEYFLPVVGYSCWTADQLTDEIKSNDWIVTS 153
>gi|375103358|ref|ZP_09749621.1| putative transcriptional regulator [Saccharomonospora cyanea
NA-134]
gi|374664090|gb|EHR63968.1| putative transcriptional regulator [Saccharomonospora cyanea
NA-134]
Length = 193
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 69/174 (39%), Gaps = 13/174 (7%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
E G LL+A + + F RTV+ ++ G G++LNRPS + + E+ D
Sbjct: 11 EPGTLLVAAPTMFDPN-FRRTVVFVIDHRAEGTLGVVLNRPSEVGVHEVLPHWGDHVA-- 67
Query: 181 SDRPLFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
R +F GGP+E+ L L + + G GV A V+
Sbjct: 68 EPRSVFVGGPVEKKTALCLAALRTGETAATVPGVIAVRGPVALVDLDSDPDLLATKVR-- 125
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
R F G GW+ QL EI G W + P + L + LW +L
Sbjct: 126 -----GLRVFAGYAGWDAGQLAGEIERGDWLIVPALPGDV-LATPMRDLWGHVL 173
>gi|259508337|ref|ZP_05751237.1| transcriptional regulator [Corynebacterium efficiens YS-314]
gi|46577489|sp|Q8FSW7.2|Y2927_COREF RecName: Full=UPF0301 protein CE2927
gi|259164071|gb|EEW48625.1| transcriptional regulator [Corynebacterium efficiens YS-314]
Length = 201
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 21/181 (11%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
+E G LL+A L F R+VIL++ G+ L S +++ + VL
Sbjct: 16 NEVAPGSLLVAAPDLASPE-FSRSVILVIEHSHATTFGVNLASRSDLAV----ANVLPEW 70
Query: 178 GTFSDRP--LFFGGPLEE----GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCA 231
+ +P L+ GGPL + GL + P G ++ S F ++ L +
Sbjct: 71 TELTAKPQALYIGGPLSQQAVVGLGVTKP---GVDIESSTKFNKLANRL---VHVDLRVT 124
Query: 232 AEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEEL 291
+ V+ + G RFF G W QLN+EI G W VA PS + L G + +W ++
Sbjct: 125 PDEVRDDLEG---MRFFAGYAEWAPGQLNDEIEQGDWYVAPALPSDV-LAPGRVDVWGDV 180
Query: 292 L 292
+
Sbjct: 181 M 181
>gi|358011647|ref|ZP_09143457.1| hypothetical protein AP8-3_09053 [Acinetobacter sp. P8-3-8]
Length = 184
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 73/180 (40%), Gaps = 15/180 (8%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
CL+ + D F TVI I + G GII+NRP+ + +KE+ + + AA
Sbjct: 10 CLIAPPDLADD--FFANTVIYIARHDEDGAQGIIINRPAGIQVKELLNDLEIAADHVHPH 67
Query: 184 PLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ GGPL E G L + G S + V E L T + + + + N G
Sbjct: 68 EVLQGGPLRPEAGFVLHT----GQPTWHSSI--AVGENLCITTSKDI---LDAIAHNE-G 117
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRRKVW 301
+ ++ G W K QL +EI G W + ++ W+ MG + W
Sbjct: 118 VDRYQIALGYASWAKNQLEDEIAKGDWLICDSDMDLV-FNLPYTDRWDAAYRKMGIDRTW 176
>gi|169632001|ref|YP_001705650.1| hypothetical protein MAB_4928c [Mycobacterium abscessus ATCC 19977]
gi|365872818|ref|ZP_09412354.1| hypothetical protein MMAS_47560 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|418251613|ref|ZP_12877744.1| hypothetical protein MAB47J26_22165 [Mycobacterium abscessus 47J26]
gi|419710381|ref|ZP_14237847.1| hypothetical protein OUW_12614 [Mycobacterium abscessus M93]
gi|419717324|ref|ZP_14244709.1| hypothetical protein S7W_22999 [Mycobacterium abscessus M94]
gi|420875660|ref|ZP_15339036.1| hypothetical protein MA4S0726RB_4319 [Mycobacterium abscessus
4S-0726-RB]
gi|420912604|ref|ZP_15375916.1| hypothetical protein MA6G0125R_4129 [Mycobacterium abscessus
6G-0125-R]
gi|420929887|ref|ZP_15393166.1| hypothetical protein MA6G1108_5098 [Mycobacterium abscessus
6G-1108]
gi|420935254|ref|ZP_15398524.1| hypothetical protein MM1S1520914_0170 [Mycobacterium massiliense
1S-152-0914]
gi|420944372|ref|ZP_15407627.1| hypothetical protein MM1S1530915_4502 [Mycobacterium massiliense
1S-153-0915]
gi|420949643|ref|ZP_15412892.1| hypothetical protein MM1S1540310_4507 [Mycobacterium massiliense
1S-154-0310]
gi|420954477|ref|ZP_15417719.1| hypothetical protein MM2B0626_4722 [Mycobacterium massiliense
2B-0626]
gi|420958652|ref|ZP_15421886.1| hypothetical protein MM2B0107_4063 [Mycobacterium massiliense
2B-0107]
gi|420963228|ref|ZP_15426452.1| hypothetical protein MM2B1231_4786 [Mycobacterium massiliense
2B-1231]
gi|420969581|ref|ZP_15432784.1| hypothetical protein MM3A0810R_5345 [Mycobacterium abscessus
3A-0810-R]
gi|420980225|ref|ZP_15443402.1| hypothetical protein MA6G0212_5156 [Mycobacterium abscessus
6G-0212]
gi|420985610|ref|ZP_15448777.1| hypothetical protein MA6G0728R_5100 [Mycobacterium abscessus
6G-0728-R]
gi|420987870|ref|ZP_15451026.1| hypothetical protein MA4S0206_4791 [Mycobacterium abscessus
4S-0206]
gi|420994587|ref|ZP_15457733.1| hypothetical protein MM2B0307_4015 [Mycobacterium massiliense
2B-0307]
gi|420995546|ref|ZP_15458689.1| hypothetical protein MM2B0912R_0172 [Mycobacterium massiliense
2B-0912-R]
gi|421004895|ref|ZP_15468017.1| hypothetical protein MM2B0912S_4728 [Mycobacterium massiliense
2B-0912-S]
gi|421010351|ref|ZP_15473460.1| hypothetical protein MA3A0119R_5260 [Mycobacterium abscessus
3A-0119-R]
gi|421015784|ref|ZP_15478858.1| hypothetical protein MA3A0122R_5368 [Mycobacterium abscessus
3A-0122-R]
gi|421020875|ref|ZP_15483931.1| hypothetical protein MA3A0122S_5118 [Mycobacterium abscessus
3A-0122-S]
gi|421026008|ref|ZP_15489051.1| hypothetical protein MA3A0731_5345 [Mycobacterium abscessus
3A-0731]
gi|421031704|ref|ZP_15494734.1| hypothetical protein MA3A0930R_5278 [Mycobacterium abscessus
3A-0930-R]
gi|421036949|ref|ZP_15499966.1| hypothetical protein MA3A0930S_5213 [Mycobacterium abscessus
3A-0930-S]
gi|421041446|ref|ZP_15504454.1| hypothetical protein MA4S0116R_4742 [Mycobacterium abscessus
4S-0116-R]
gi|421046009|ref|ZP_15509009.1| hypothetical protein MA4S0116S_3862 [Mycobacterium abscessus
4S-0116-S]
gi|421051945|ref|ZP_15514939.1| hypothetical protein MMCCUG48898_4959 [Mycobacterium massiliense
CCUG 48898 = JCM 15300]
gi|226707634|sp|B1MML1.1|Y4928_MYCA9 RecName: Full=UPF0301 protein MAB_4928c
gi|169243968|emb|CAM64996.1| Conserved hypothetical protein [Mycobacterium abscessus]
gi|353448770|gb|EHB97171.1| hypothetical protein MAB47J26_22165 [Mycobacterium abscessus 47J26]
gi|363992884|gb|EHM14111.1| hypothetical protein MMAS_47560 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|382938390|gb|EIC62726.1| hypothetical protein S7W_22999 [Mycobacterium abscessus M94]
gi|382941213|gb|EIC65533.1| hypothetical protein OUW_12614 [Mycobacterium abscessus M93]
gi|392067135|gb|EIT92983.1| hypothetical protein MA4S0726RB_4319 [Mycobacterium abscessus
4S-0726-RB]
gi|392114598|gb|EIU40367.1| hypothetical protein MA6G0125R_4129 [Mycobacterium abscessus
6G-0125-R]
gi|392126875|gb|EIU52626.1| hypothetical protein MA6G1108_5098 [Mycobacterium abscessus
6G-1108]
gi|392145978|gb|EIU71702.1| hypothetical protein MM1S1530915_4502 [Mycobacterium massiliense
1S-153-0915]
gi|392146761|gb|EIU72482.1| hypothetical protein MM1S1520914_0170 [Mycobacterium massiliense
1S-152-0914]
gi|392150684|gb|EIU76397.1| hypothetical protein MM1S1540310_4507 [Mycobacterium massiliense
1S-154-0310]
gi|392153390|gb|EIU79097.1| hypothetical protein MM2B0626_4722 [Mycobacterium massiliense
2B-0626]
gi|392164503|gb|EIU90192.1| hypothetical protein MA6G0212_5156 [Mycobacterium abscessus
6G-0212]
gi|392170606|gb|EIU96284.1| hypothetical protein MA6G0728R_5100 [Mycobacterium abscessus
6G-0728-R]
gi|392180689|gb|EIV06341.1| hypothetical protein MM2B0307_4015 [Mycobacterium massiliense
2B-0307]
gi|392182149|gb|EIV07800.1| hypothetical protein MA4S0206_4791 [Mycobacterium abscessus
4S-0206]
gi|392191366|gb|EIV16991.1| hypothetical protein MM2B0912R_0172 [Mycobacterium massiliense
2B-0912-R]
gi|392193598|gb|EIV19222.1| hypothetical protein MM2B0912S_4728 [Mycobacterium massiliense
2B-0912-S]
gi|392195957|gb|EIV21576.1| hypothetical protein MA3A0119R_5260 [Mycobacterium abscessus
3A-0119-R]
gi|392196419|gb|EIV22037.1| hypothetical protein MA3A0122R_5368 [Mycobacterium abscessus
3A-0122-R]
gi|392206598|gb|EIV32181.1| hypothetical protein MA3A0122S_5118 [Mycobacterium abscessus
3A-0122-S]
gi|392209531|gb|EIV35103.1| hypothetical protein MA3A0731_5345 [Mycobacterium abscessus
3A-0731]
gi|392219586|gb|EIV45111.1| hypothetical protein MA3A0930R_5278 [Mycobacterium abscessus
3A-0930-R]
gi|392220801|gb|EIV46325.1| hypothetical protein MA3A0930S_5213 [Mycobacterium abscessus
3A-0930-S]
gi|392222374|gb|EIV47897.1| hypothetical protein MA4S0116R_4742 [Mycobacterium abscessus
4S-0116-R]
gi|392235462|gb|EIV60960.1| hypothetical protein MA4S0116S_3862 [Mycobacterium abscessus
4S-0116-S]
gi|392240548|gb|EIV66041.1| hypothetical protein MMCCUG48898_4959 [Mycobacterium massiliense
CCUG 48898]
gi|392245237|gb|EIV70715.1| hypothetical protein MM3A0810R_5345 [Mycobacterium abscessus
3A-0810-R]
gi|392246141|gb|EIV71618.1| hypothetical protein MM2B1231_4786 [Mycobacterium massiliense
2B-1231]
gi|392248378|gb|EIV73854.1| hypothetical protein MM2B0107_4063 [Mycobacterium massiliense
2B-0107]
Length = 208
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 77/184 (41%), Gaps = 27/184 (14%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
H G LLIA L F R+VI I+ G G++LNRPS ++ + A
Sbjct: 23 HRLRAGTLLIANTNL-FEPTFRRSVIFIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLA 81
Query: 178 GTFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
G + +F GGP+ + L L + + G V GV G + G A MV
Sbjct: 82 G--KPKTMFVGGPVKRDAALCLATLRAG---VSIDGV---------KGLRHVAGRMA-MV 126
Query: 236 KRNAVGPED-------FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLW 288
+A PED R F G GW QL E+ W V + PS + L + LW
Sbjct: 127 DLDA-EPEDIAPLVEGIRVFAGYSGWTIGQLEGEVERDDWIVLSALPSDV-LTDASEDLW 184
Query: 289 EELL 292
++L
Sbjct: 185 AKVL 188
>gi|21221393|ref|NP_627172.1| hypothetical protein SCO2948 [Streptomyces coelicolor A3(2)]
gi|289771322|ref|ZP_06530700.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|46577553|sp|Q9L1U6.1|Y2948_STRCO RecName: Full=UPF0301 protein SCO2948
gi|6911978|emb|CAB72194.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
gi|289701521|gb|EFD68950.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length = 193
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + FER V+L+L + G G++LNRP+ + + ++ D AG
Sbjct: 12 GRLLVATPALADPN-FERAVVLLLDHDEEGSLGVVLNRPTPVDVGDILEDWADLAGEPGV 70
Query: 183 RPLFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+F GGP L+ L + V P G E G + +V + E A + A
Sbjct: 71 --VFQGGPVSLDSALGVAVVPGGASGERAPLG-WRRVHGAIGLVDLE----APPELLAPA 123
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
VG R F G GW QL +E+ G W V P
Sbjct: 124 VGA--LRIFAGYAGWGPGQLEDELTEGAWYVVESEP 157
>gi|320102718|ref|YP_004178309.1| hypothetical protein Isop_1173 [Isosphaera pallida ATCC 43644]
gi|319750000|gb|ADV61760.1| protein of unknown function DUF179 [Isosphaera pallida ATCC 43644]
Length = 182
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 15/171 (8%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
KG LLIA L + F +TV+L+L +G +G++LNRP ++ + T + +
Sbjct: 5 KGHLLIAHPSLLDPN-FTKTVLLMLEHTQLGAAGLVLNRPIDGTVAAISQTAFNHPCDW- 62
Query: 182 DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
++P+ GGP+ L +V + +++++G+Y ++K
Sbjct: 63 EKPIHLGGPVTGPLTIVHQCAEWAD-------QEILDGVYSTIDRDKLSQMVLLK----- 110
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
PE C GW QL E+ W +P I +G LW+ ++
Sbjct: 111 PEPSLVLFNCAGWGPGQLEYELAEDSWYHCPATPEHI-FWNGMGNLWDAVI 160
>gi|148825416|ref|YP_001290169.1| hypothetical protein CGSHiEE_01530 [Haemophilus influenzae PittEE]
gi|229846393|ref|ZP_04466501.1| hypothetical protein CGSHi7P49H1_06970 [Haemophilus influenzae
7P49H1]
gi|166231399|sp|A5UAI5.1|Y1530_HAEIE RecName: Full=UPF0301 protein CGSHiEE_01530
gi|148715576|gb|ABQ97786.1| hypothetical protein CGSHiEE_01530 [Haemophilus influenzae PittEE]
gi|229810486|gb|EEP46204.1| hypothetical protein CGSHi7P49H1_06970 [Haemophilus influenzae
7P49H1]
Length = 186
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 22/165 (13%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAG 178
+G LIA LD F RTV+ + G G+++N+P+ +SI E+ S + +
Sbjct: 5 QGKFLIAMPHLDDY--FNRTVVFMCEHNEQGSMGLVINQPTDLSIAELYSKLNFMMKNDR 62
Query: 179 TFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE-TVGCAAEMV 235
TF + + GGP+ E G L F+ Y T+E ++ +A++V
Sbjct: 63 TFGNEMVVAGGPVHTERGFIL--------HKNTLNAFQHT----YKVTEELSMTTSADVV 110
Query: 236 KR--NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ + PE + GC W QL +EI W V + ++
Sbjct: 111 ETLGSTFAPEKYLVALGCSSWGAGQLEKEISDNAWLVVSSKDQIL 155
>gi|330465940|ref|YP_004403683.1| hypothetical protein VAB18032_09825 [Verrucosispora maris
AB-18-032]
gi|328808911|gb|AEB43083.1| hypothetical protein VAB18032_09825 [Verrucosispora maris
AB-18-032]
Length = 184
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
E G LL+AT L + F+RTV+L+++ EP G G++LNR + + + + VL G
Sbjct: 2 ESMTGKLLVATPALKDPN-FDRTVVLLVAHEPGGALGVVLNRATEVPVAD----VLRDWG 56
Query: 179 TFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
+ P LF GGP+ E + L V + F QV G T+ + +
Sbjct: 57 DLARHPAVLFEGGPVQPESAICLARMH---SPVRRLKGFHQVS-----GAVGTLDLSVDP 108
Query: 235 VK-RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
+ R +V + R F G GW QL +EI G W V P
Sbjct: 109 DRLRESV--QTIRVFAGYAGWGGGQLEQEIEEGSWFVLDALP 148
>gi|244539359|dbj|BAH83402.1| hypothetical protein ICMP_561 [Candidatus Ishikawaella capsulata
Mpkobe]
Length = 201
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 66/168 (39%), Gaps = 25/168 (14%)
Query: 138 FERTVILILSMEPMGPSGIILNRP----------SLMSIKEMRSTVLDAAGTFSDR---P 184
F R+VI I P G GII+N+P + IK + + F DR
Sbjct: 25 FRRSVIYICEHSPEGAMGIIVNKPLETLTVKNFLQKLKIKSISNKAKLRKNNFVDRLEKI 84
Query: 185 LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
+F GGPL + G L S + + S ++ + E T V +K+ P
Sbjct: 85 VFVGGPLAADRGFILHSAQSS---IYASSIY--ISENTVITTSRDVLETIGTIKQ----P 135
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEE 290
E+ G C W+K QL EI W + ++I E+ W E
Sbjct: 136 ENLLVALGYCAWKKNQLENEILENIWLTTPATNNLI-FETPIANRWYE 182
>gi|296167091|ref|ZP_06849501.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897533|gb|EFG77129.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 201
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 77/195 (39%), Gaps = 21/195 (10%)
Query: 104 PPQNSLGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSL 163
PP D A G LL+A L F R+VI I+ G G++LNR S
Sbjct: 2 PPPEDPEDYVAPAAQRVRAGTLLLANTDL-FEPTFRRSVIYIVEHNDGGTLGVVLNRASE 60
Query: 164 MSIKEMRSTVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEG 219
++ VL + +P +F GGP+ + L L + + G D G +G+
Sbjct: 61 TAVYN----VLPQWTKLAAKPKTMFIGGPVKRDAALCLAALRVGADPQGVAGLRHVAGRV 116
Query: 220 LYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPS--V 277
+ A +V E R F G GW QL EI W V + PS +
Sbjct: 117 VMVDLDADPDTIAPLV-------EGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVL 169
Query: 278 IGLESGTLGLWEELL 292
+G S LW ++L
Sbjct: 170 VGPRS---DLWSQVL 181
>gi|456863360|gb|EMF81827.1| hypothetical protein LEP1GSC188_0935 [Leptospira weilii serovar
Topaz str. LT2116]
Length = 182
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ E G +LI+ + + F +TVIL++ + G G+ILN+ +SI ++ + D
Sbjct: 1 MEETYNGKILISNSSI-VMDYFNQTVILMVEHDNQGAFGLILNKKQKVSIGDVIQGIPDH 59
Query: 177 AGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
P++ GGP++ L +S +++ + G+ +V+ GLY + E++K
Sbjct: 60 VS--RTLPIYSGGPVD--LTFISVLHEDNKISQPGI--EVIPGLYLA--RSYDTLLELLK 111
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ F + G GW QL E+ W + + +
Sbjct: 112 STS----KFHVYQGYSGWSAGQLETEMGRKSWVIHEATKDFV 149
>gi|359421458|ref|ZP_09213384.1| hypothetical protein GOARA_068_01140 [Gordonia araii NBRC 100433]
gi|358242717|dbj|GAB11453.1| hypothetical protein GOARA_068_01140 [Gordonia araii NBRC 100433]
Length = 209
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 31/190 (16%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAG 178
G LLIA+ L F RTV+ I+ E G G+++N+PS ++ + R + L A
Sbjct: 27 RAGTLLIASPALTESS-FARTVVYIIEHEDGGSIGVVINQPSHSAVHNLLPRWSSLAA-- 83
Query: 179 TFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
+ + LF GGP++ D GV E ++ G TV +V +
Sbjct: 84 --NPKALFVGGPVKR-----------DGALCLGVVEHGVDVHGVGGLMTVSGRVVLVDLD 130
Query: 239 AVGPE-------DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEEL 291
A PE R G GW QL++E+ W VA+ P + L + LW
Sbjct: 131 A-DPEILSPLLVGVRVMAGYAGWGPGQLDDELSEDSWLVASALPDDV-LSPAGVDLWATA 188
Query: 292 LWLMGRRKVW 301
L RR+ W
Sbjct: 189 L----RRQPW 194
>gi|409356321|ref|ZP_11234708.1| hypothetical protein Dali7_00677 [Dietzia alimentaria 72]
Length = 210
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 114 AHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV 173
A +P G LL++ + + F R++I ++ + G G+++ R S ++E+
Sbjct: 21 AMDKRDPVAGSLLLSAPDMPDPN-FRRSIIYMIEHDFSGSLGVVITRRSETDVEEILPAW 79
Query: 174 LDAAGTFSDRPLF-FGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGC 230
D S P+F GGP+ + G+ LV + G D G+ G+ Q +EG +
Sbjct: 80 SDLC---SSPPVFHIGGPVKPDTGIALVVLRSGVDGSGQVGL--QQIEGRVHVVD--LDS 132
Query: 231 AAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEE 290
+ ++ + G R F G GW QL +E+ G W VA P+ + L + +W E
Sbjct: 133 DPDQLRDDVEG---MRVFVGYTGWAPGQLQDELDRGDWYVAPSLPTDL-LAPARVDVWGE 188
Query: 291 LL 292
+L
Sbjct: 189 VL 190
>gi|225020839|ref|ZP_03710031.1| hypothetical protein CORMATOL_00847 [Corynebacterium matruchotii
ATCC 33806]
gi|224946321|gb|EEG27530.1| hypothetical protein CORMATOL_00847 [Corynebacterium matruchotii
ATCC 33806]
Length = 189
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 17/179 (9%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
EP G LL+A + F RTV+L+L + G+ L +++ + +D
Sbjct: 4 EEPAAGKLLVAAPGMQSTA-FSRTVVLLLEHDANTTFGVDLAHRMDIAVANVLPDWVDCI 62
Query: 178 GTFSDRPLFFGGPLEE----GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
+ ++ GGP+ G+ + P ++ F+++ L +G
Sbjct: 63 S--KPQAMYAGGPVSPQSAVGVCVTKPDL---DINSRPYFKKLANRLAL---VDLGAPPS 114
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
VK + G R F G W QL+EEI AG W VA C PS + +G++ +W +++
Sbjct: 115 EVKADITG---MRMFIGYAEWSPGQLDEEIAAGEWYVAPCLPSDV-TAAGSVDIWGDVM 169
>gi|254460158|ref|ZP_05073574.1| conserved hypothetical protein [Rhodobacterales bacterium HTCC2083]
gi|206676747|gb|EDZ41234.1| conserved hypothetical protein [Rhodobacteraceae bacterium
HTCC2083]
Length = 191
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 9/143 (6%)
Query: 138 FERTVILILSMEPMGPSGIILN-RPSLMSIKE-MRSTVLDAAGTFSDRPLFFGGPLEEGL 195
F+ +VI I + G G+I+N R + + + M + T D P++FGGP+E G
Sbjct: 26 FQSSVIFICAHSAEGAMGLIVNKRVQDVELGDLMNQLSIPKGDTSPDLPIYFGGPVEHGR 85
Query: 196 FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWE 255
V G D + + GL F T+ ++ GPE G GW
Sbjct: 86 GFV--LHGADYKSE---LSTMQTGLQFAMTATIDILEDIGAHK--GPERALIALGYAGWG 138
Query: 256 KEQLNEEIRAGYWTVAACSPSVI 278
QL +EI A W +A P +I
Sbjct: 139 PGQLEQEIAANGWLLADVGPDII 161
>gi|407649360|ref|YP_006813119.1| hypothetical protein O3I_041000 [Nocardia brasiliensis ATCC 700358]
gi|407312244|gb|AFU06145.1| hypothetical protein O3I_041000 [Nocardia brasiliensis ATCC 700358]
Length = 214
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 17/174 (9%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTF 180
G LL++ +L F RTV+ I+ G G++LNRPS ++ ++ R T L AA
Sbjct: 34 GTLLVSATEL-AEPTFRRTVVYIIEHNEAGSLGVVLNRPSDTAVHDVLPRWTELTAA--- 89
Query: 181 SDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
R LF GGP+ + L L + + G G G+ + ++G + E + R
Sbjct: 90 -PRTLFIGGPVKRDAALCLGTVRVGASIDGVPGL--RRIDGRVVLVD--LDADPEEIGRL 144
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
E R F G GW QL E+ W V + PS + +G LW +L
Sbjct: 145 V---EGIRIFAGYAGWTFGQLEGELENDDWIVLSALPS-DPISTGRADLWAHVL 194
>gi|379716373|ref|YP_005304710.1| hypothetical protein Cp316_2157 [Corynebacterium pseudotuberculosis
316]
gi|384505679|ref|YP_005682349.1| hypothetical protein Cp1002_2094 [Corynebacterium
pseudotuberculosis 1002]
gi|302331755|gb|ADL21949.1| Hypothetical protein Cp1002_2094 [Corynebacterium
pseudotuberculosis 1002]
gi|377655079|gb|AFB73428.1| Hypothetical protein Cp316_2157 [Corynebacterium pseudotuberculosis
316]
Length = 201
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
++P G LLIA ++ +F R+VIL+L G+ L S +++ V+
Sbjct: 16 NQPAPGMLLIAAPSMED-PVFARSVILLLEHNEATTFGVNLASRSDVAV----FNVMPEW 70
Query: 178 GTFSDRP--LFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
+P L+ GGPL ++G+ + G ++ F ++ L T E
Sbjct: 71 APLVSKPQALYIGGPLNQQGVIGIGVSAPGVDIVSHPHFNRLANRLVHVDLRT---QPED 127
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
V + G R F G WE QLNEEI G W VA S + +G + +W +++
Sbjct: 128 VAADLSG---LRLFAGYAEWEPGQLNEEIEKGEWYVAPALSSDV-TAAGNVDVWGDVM 181
>gi|350273081|ref|YP_004884394.1| hypothetical protein RJP_0030 [Rickettsia japonica YH]
gi|348592294|dbj|BAK96255.1| hypothetical protein RJP_0030 [Rickettsia japonica YH]
Length = 189
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 21/175 (12%)
Query: 109 LGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR-PSLMSIK 167
+GD H + G L+AT + I+ +++I +LS G G+I NR + + +K
Sbjct: 1 MGDTIFHNL----SGKTLVATPHVITKGIYHKSLIYMLSHTEEGAIGLIFNRLVNHIDLK 56
Query: 168 EMRSTVLDAAGTFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
D T P++ GGP+ E+G FL S + + L F
Sbjct: 57 SFFKIKNDEITTPVMVPIYLGGPVEHEKGFFLHSSDYNKNLL------------LDFHND 104
Query: 226 ETVGCAAEMVKRNAV--GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ E+ + A GP++ F G W+ QL EE+ W V C+ I
Sbjct: 105 LAISSNLEISEDIAFGKGPKNSLFIVGYTAWKPGQLEEELETNLWLVMDCNKEFI 159
>gi|253996011|ref|YP_003048075.1| hypothetical protein Mmol_0638 [Methylotenera mobilis JLW8]
gi|253982690|gb|ACT47548.1| protein of unknown function DUF179 [Methylotenera mobilis JLW8]
Length = 193
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 19/152 (12%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTF 180
G LIA L + F ++V I + G GI++NRP+ M+ + + + +
Sbjct: 10 GHFLIAMPNLADPY-FAKSVTFICTHSEEGAMGIVINRPTDMNYETLFDKINIKLEDTAI 68
Query: 181 SDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
++ P+ FGGP+ E G L P G D + K + + ++++
Sbjct: 69 ANSPVLFGGPVQPERGFVLHEPCGDWDS------------SIIINDKTALTTSKDILEAV 116
Query: 239 AVG--PEDFRFFDGCCGWEKEQLNEEIRAGYW 268
AVG P+ F G GW QL +EI W
Sbjct: 117 AVGTGPKKLLFSLGYAGWTPNQLEQEIVQNSW 148
>gi|395237845|ref|ZP_10415859.1| putative transcriptional regulator [Turicella otitidis ATCC 51513]
gi|423351883|ref|ZP_17329514.1| hypothetical protein HMPREF9719_01809 [Turicella otitidis ATCC
51513]
gi|394486826|emb|CCI83947.1| putative transcriptional regulator [Turicella otitidis ATCC 51513]
gi|404386057|gb|EJZ81231.1| hypothetical protein HMPREF9719_01809 [Turicella otitidis ATCC
51513]
Length = 202
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 78/182 (42%), Gaps = 23/182 (12%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
+EP G LL+A L F R+V+LIL P G+ L S +++ TVL A
Sbjct: 17 NEPAPGSLLVAAPDLMAPE-FSRSVVLILEHNPTYTLGLTLTARSEVAVD----TVLPAW 71
Query: 178 GTFSDRP--LFFGGPLE-EGLFLVSPKGGGDEV----GKSGVFEQVMEGLYFGTKETVGC 230
F+ P ++ GGPLE G V G ++ G S + ++++ E++
Sbjct: 72 AGFAAAPPAVYVGGPLEPRGALAVGVASAGADIEAAPGVSRIANRIVQVDLGQDPESLAG 131
Query: 231 AAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEE 290
+ E + R F G W QL E+ G W VA PS + + LW +
Sbjct: 132 SVEGI----------RVFLGHAAWGPGQLAGELADGDWYVAPALPSDV-VAPARRDLWGD 180
Query: 291 LL 292
+L
Sbjct: 181 VL 182
>gi|383766745|ref|YP_005445726.1| hypothetical protein PSMK_16700 [Phycisphaera mikurensis NBRC
102666]
gi|381387013|dbj|BAM03829.1| hypothetical protein PSMK_16700 [Phycisphaera mikurensis NBRC
102666]
Length = 194
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 19/186 (10%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM----RSTVLDAAG 178
G LL+A L+ F R V+L++ P G G++LN+P+ + + ++ + D AG
Sbjct: 6 GKLLLAAPSLEEA-AFHRAVVLVIEHGPAGAMGLVLNKPTPLKLADVLAKTETEAGDDAG 64
Query: 179 TFSDRPLFF--GGPLEEGLFLVSPKGG-GDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
+D + GGP LF++ G GD + + GL+ V +V
Sbjct: 65 FEADEAVLLHQGGPCPGPLFVLHADGCLGD--------REPVPGLFLSNDGDV--IRLLV 114
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLM 295
+ P +R G GW QL E+ G W +A V+ G G W +L
Sbjct: 115 REPPAAPLPWRAVGGYAGWGPGQLEGELGEGSWRIAEAPVDVLLNLDGDAG-WLDLTRSA 173
Query: 296 GRRKVW 301
R V+
Sbjct: 174 AREAVY 179
>gi|152977887|ref|YP_001343516.1| hypothetical protein Asuc_0201 [Actinobacillus succinogenes 130Z]
gi|150839610|gb|ABR73581.1| protein of unknown function DUF179 [Actinobacillus succinogenes
130Z]
Length = 201
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 19/171 (11%)
Query: 115 HTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV- 173
T+ + LL+A L+ + F R VI I G G+++N+P+ +SI E+ + V
Sbjct: 13 QTVKMNLQNQLLVAMPNLEDDY-FSRAVIYICEHTEQGTMGLVINQPTDLSITELAAKVN 71
Query: 174 --LDAAGTFSDRPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVG 229
+ T ++ + GGP +E G L +P + + + + ++
Sbjct: 72 FMMKIDRTLPNQAVLAGGPVNVERGFILHTP-----------IRKPLQHSYRITDRLSLT 120
Query: 230 CAAEMVKR--NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+A++++ + PE + GC W QL +EI W V SV+
Sbjct: 121 TSADIIETFGSPDSPEKYLVVLGCAAWVPGQLEQEIGRNDWLVVPADDSVL 171
>gi|118574332|sp|Q5LX84.2|Y296_SILPO RecName: Full=UPF0301 protein SPO0296
Length = 184
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTF 180
G LLIA + G FER+VI + S G G+I+N+P+ +++ + + + ++
Sbjct: 5 GKLLIAMPGM-GDPRFERSVIFLCSHGEDGAMGLIVNKPADLNVSTLLEQLEIPSSSAAA 63
Query: 181 SDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
+ P+ GGP+E G L SP D GK +V +G F T+ ++ + N
Sbjct: 64 ARAPVRLGGPVEMARGFVLHSP----DYAGKLQSL-KVSDG--FVMTATLDILEDIARDN 116
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GP G GW QL EI W A P ++ S G WE L L+G
Sbjct: 117 --GPARAALMLGYSGWGPGQLEAEIGDNGWLTADADPDIV-FGSRDDGKWEAALKLLG 171
>gi|300859511|ref|YP_003784494.1| hypothetical protein cpfrc_02094 [Corynebacterium
pseudotuberculosis FRC41]
gi|375289710|ref|YP_005124251.1| hypothetical protein Cp3995_2160 [Corynebacterium
pseudotuberculosis 3/99-5]
gi|383315259|ref|YP_005376114.1| hypothetical protein CpP54B96_2128 [Corynebacterium
pseudotuberculosis P54B96]
gi|384507771|ref|YP_005684440.1| hypothetical protein CpC231_2087 [Corynebacterium
pseudotuberculosis C231]
gi|384509867|ref|YP_005686535.1| hypothetical protein CpI19_2108 [Corynebacterium pseudotuberculosis
I19]
gi|384511947|ref|YP_005691525.1| hypothetical protein CpPAT10_2097 [Corynebacterium
pseudotuberculosis PAT10]
gi|387137594|ref|YP_005693574.1| hypothetical protein Cp4202_2085 [Corynebacterium
pseudotuberculosis 42/02-A]
gi|387141621|ref|YP_005697599.1| hypothetical protein Cp106_2050 [Corynebacterium pseudotuberculosis
1/06-A]
gi|300686965|gb|ADK29887.1| hypothetical protein cpfrc_02094 [Corynebacterium
pseudotuberculosis FRC41]
gi|302207194|gb|ADL11536.1| Hypothetical protein CpC231_2087 [Corynebacterium
pseudotuberculosis C231]
gi|308277447|gb|ADO27346.1| Hypothetical protein CpI19_2108 [Corynebacterium pseudotuberculosis
I19]
gi|341825886|gb|AEK93407.1| Hypothetical protein CpPAT10_2097 [Corynebacterium
pseudotuberculosis PAT10]
gi|348608039|gb|AEP71312.1| Hypothetical protein Cp4202_2085 [Corynebacterium
pseudotuberculosis 42/02-A]
gi|355393412|gb|AER70077.1| Hypothetical protein Cp106_2050 [Corynebacterium pseudotuberculosis
1/06-A]
gi|371576999|gb|AEX40602.1| Hypothetical protein Cp3995_2160 [Corynebacterium
pseudotuberculosis 3/99-5]
gi|380870760|gb|AFF23234.1| Hypothetical protein CpP54B96_2128 [Corynebacterium
pseudotuberculosis P54B96]
Length = 198
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
++P G LLIA ++ +F R+VIL+L G+ L S +++ V+
Sbjct: 13 NQPAPGMLLIAAPSMED-PVFARSVILLLEHNEATTFGVNLASRSDVAV----FNVMPEW 67
Query: 178 GTFSDRP--LFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
+P L+ GGPL ++G+ + G ++ F ++ L T E
Sbjct: 68 APLVSKPQALYIGGPLNQQGVIGIGVSAPGVDIVSHPHFNRLANRLVHVDLRT---QPED 124
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
V + G R F G WE QLNEEI G W VA S + +G + +W +++
Sbjct: 125 VAADLSG---LRLFAGYAEWEPGQLNEEIEKGEWYVAPALSSDV-TAAGNVDVWGDVM 178
>gi|290959981|ref|YP_003491163.1| hypothetical protein SCAB_55961 [Streptomyces scabiei 87.22]
gi|260649507|emb|CBG72622.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 190
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 11/155 (7%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + ++ + AG
Sbjct: 9 GRLLVATPALADPN-FDRAVVLLLDHDEKGSLGVVLNRPTPVGVADILEDWAELAGEPGV 67
Query: 183 RPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
+F GGP L+ L + GGG + +V + E A + +A+
Sbjct: 68 --VFQGGPVQLDSALGVAVIPGGGSADRAPLGWRRVHGAIGLVDLE----APPELLASAL 121
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
G R F G GW QL +E+ G W V P
Sbjct: 122 G--SLRIFAGYAGWGPGQLEDELAEGAWYVVESEP 154
>gi|161830662|ref|YP_001597828.1| hypothetical protein COXBURSA331_A2219 [Coxiella burnetii RSA 331]
gi|165924190|ref|ZP_02220022.1| conserved hypothetical protein [Coxiella burnetii Q321]
gi|189039517|sp|A9KDE7.1|Y2193_COXBN RecName: Full=UPF0301 protein CBUD_2193
gi|189039781|sp|A9NBU1.1|Y2219_COXBR RecName: Full=UPF0301 protein COXBURSA331_A2219
gi|161762529|gb|ABX78171.1| conserved hypothetical protein [Coxiella burnetii RSA 331]
gi|165916366|gb|EDR34970.1| conserved hypothetical protein [Coxiella burnetii Q321]
Length = 181
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 28/179 (15%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRS--TVLDAAGTFSD 182
L+A +L+ F + VI + + G GII+NRP +++ ++ + A ++
Sbjct: 11 FLVAMPQLNDF-TFTKAVIYVSQHDAKGALGIIINRPLALTLGKVLEHLNIEIAQPQIAN 69
Query: 183 RPLFFGGPL-EEGLFLV----SPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
P+ GGP+ +E F+V SP+G E L +K+ + + + +
Sbjct: 70 HPVLMGGPIGQEHGFIVYEQESPQGA--------------EILLSASKDML----DDIAK 111
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
N GP+DF G GWE QL EI W V + ++ E+ W++ L+G
Sbjct: 112 NK-GPDDFLITLGYAGWEAGQLENEIARNDWLVVPFNRKIL-FETPLKSRWQKAAALIG 168
>gi|224826990|ref|ZP_03700088.1| protein of unknown function DUF179 [Pseudogulbenkiania ferrooxidans
2002]
gi|224600823|gb|EEG07008.1| protein of unknown function DUF179 [Pseudogulbenkiania ferrooxidans
2002]
Length = 186
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 62/147 (42%), Gaps = 16/147 (10%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT---FSDRPLFFGGPL-- 191
+F R+++ + G GII+N+PS +++ ++ + D T P++FGGP+
Sbjct: 21 LFARSLVYLCEHGEHGAMGIIVNKPSGIAMAQLFDQI-DLPLTEEALQGEPVYFGGPVQP 79
Query: 192 EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGC 251
E G L P VG V + L T + V A K GP+ G
Sbjct: 80 ERGFVLHMP------VGNWQTSLLVTDELALTTSKDVLVAVSENK----GPDTMMVSLGY 129
Query: 252 CGWEKEQLNEEIRAGYWTVAACSPSVI 278
GW QL EEIR W P +I
Sbjct: 130 SGWSSGQLEEEIRNNGWLTVNADPHII 156
>gi|392401569|ref|YP_006438169.1| hypothetical protein Cp162_2073 [Corynebacterium pseudotuberculosis
Cp162]
gi|390532647|gb|AFM08376.1| Hypothetical protein Cp162_2073 [Corynebacterium pseudotuberculosis
Cp162]
Length = 193
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
++P G LLIA ++ +F R+VIL+L G+ L S +++ V+
Sbjct: 8 NQPAPGMLLIAAPSMED-PVFARSVILLLEHNEATTFGVNLASRSDVAV----FNVMPEW 62
Query: 178 GTFSDRP--LFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
+P L+ GGPL ++G+ + G ++ F ++ L T E
Sbjct: 63 APLVSKPQALYIGGPLNQQGVIGIGVSAPGVDIVSHPHFNRLANRLVHVDLRT---QPED 119
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
V + G R F G WE QLNEEI G W VA S + +G + +W +++
Sbjct: 120 VAADLSG---LRLFAGYAEWEPGQLNEEIEKGEWYVAPALSSDV-TAAGNVDVWGDVM 173
>gi|387139656|ref|YP_005695635.1| hypothetical protein CpCIP5297_2122 [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|389851431|ref|YP_006353666.1| hypothetical protein Cp258_2117 [Corynebacterium pseudotuberculosis
258]
gi|349736134|gb|AEQ07612.1| Hypothetical protein CpCIP5297_2122 [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|388248737|gb|AFK17728.1| Hypothetical protein Cp258_2117 [Corynebacterium pseudotuberculosis
258]
Length = 198
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
++P G LLIA ++ +F R+VIL+L G+ L S +++ V+
Sbjct: 13 NQPAPGMLLIAAPSMED-PVFARSVILLLEHNEATTFGVNLASRSDVAV----FNVMPEW 67
Query: 178 GTFSDRP--LFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
+P L+ GGPL ++G+ + G ++ F ++ L T E
Sbjct: 68 APLVSKPQALYIGGPLNQQGVIGIGVSAPGVDIVSHPHFNRLANRLLHVDLRT---QPED 124
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
V + G R F G WE QLNEEI G W VA S + +G + +W +++
Sbjct: 125 VAADLSG---LRLFAGYAEWEPGQLNEEIEKGEWYVAPALSSDV-TAAGNVDVWGDVM 178
>gi|237720981|ref|ZP_04551462.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229449816|gb|EEO55607.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 196
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 33/189 (17%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR--PSLMSIKEMRSTVLDAA 177
P +G +LI+ L F R+VIL++ G G+++N+ P ++ M LD
Sbjct: 17 PSRGRILISEPFLRDA-TFGRSVILLVDHTDEGSMGLVINKQLPLFLNDIIMEFKYLDEI 75
Query: 178 GTFSDRPLFFGGPL-EEGLFLV---SPKGGGDEVGK----SGVFEQVMEGLYFGTKETVG 229
PL+ GGP+ + LF + S G + K +G F+++ + + G K +
Sbjct: 76 ------PLYKGGPIATDTLFYLHTLSDIPGSISISKGLYLNGDFDEIKKYILQGNKIS-- 127
Query: 230 CAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWE 289
E RFF G GW+ EQL+ EIR W V+ S + +++ +W
Sbjct: 128 -------------ECIRFFLGYSGWDSEQLSNEIRENTWLVSEEEKSYL-MKNNIKDMWR 173
Query: 290 ELLWLMGRR 298
+ L +G +
Sbjct: 174 KALEKLGSK 182
>gi|304313295|ref|YP_003812893.1| hypothetical protein HDN1F_36880 [gamma proteobacterium HdN1]
gi|301799028|emb|CBL47271.1| Protein of unknown function DUF179 [gamma proteobacterium HdN1]
Length = 187
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE----MRSTVLDAA 177
K LIA L+ + F +T+ I G GI++NRPS +++ + + ++D
Sbjct: 8 KNHFLIAMPTLEDPN-FSQTITYICEHSAEGAMGIVVNRPSDLTVAQVFNHLEIPMID-- 64
Query: 178 GTFSDRPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGT-KETVGCAAEM 234
F+ + + GGP +E G L G D ++ +G+Y T KE + A+
Sbjct: 65 DRFTQQMVLHGGPVQVERGFVLHRDSGNWDST------VEIQDGIYLSTSKEILAAMAQ- 117
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GPE G GW QL++E+ W S S++
Sbjct: 118 ----GHGPEKALIALGYAGWGAGQLDDEMANNAWLSVPASDSIL 157
>gi|339504282|ref|YP_004691702.1| hypothetical protein RLO149_c027770 [Roseobacter litoralis Och 149]
gi|338758275|gb|AEI94739.1| hypothetical protein DUF179 [Roseobacter litoralis Och 149]
Length = 184
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 79/181 (43%), Gaps = 21/181 (11%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMR-STVLDAAGTFS 181
G LL+A + G FE V+LI + G G+I+N+P+ E+R S VLD S
Sbjct: 5 GKLLVAMPSM-GDPRFENAVVLICAHSAKGAMGLIINKPT----PEIRMSDVLDQLDILS 59
Query: 182 -----DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
D + FGGP+E G V S + V++G FG T+ E+ +
Sbjct: 60 SQKGRDMVVHFGGPVETGRGFVLHS----TDYTSSLNTLVVDG-AFGMTATLDILEEIAE 114
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEI-RAGYWTVAACSPSVIGLESGTLGLWEELLWLM 295
GP D G GW QL EI + G+ T A S V GL + W E L +
Sbjct: 115 GR--GPSDALMMLGYAGWGGGQLENEIAQNGWLTTNASSELVFGLPAAR--KWSEALHSL 170
Query: 296 G 296
G
Sbjct: 171 G 171
>gi|119899748|ref|YP_934961.1| transcriptional regulator [Azoarcus sp. BH72]
gi|166232592|sp|A1KB69.1|Y3459_AZOSB RecName: Full=UPF0301 protein azo3459
gi|119672161|emb|CAL96075.1| transcriptional regulator [Azoarcus sp. BH72]
Length = 188
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 13/157 (8%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFS 181
LIA + H F RT+ I G G+I+NRP M+++ + V L+A G F+
Sbjct: 12 FLIAMPNMADPH-FARTLTYIAEHSDQGALGLIINRPLDMTLETLFERVELPLEADG-FA 69
Query: 182 DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+P++FGGP++ V + GD V + + +++G + E
Sbjct: 70 GQPVYFGGPVQTDRGFVLHRPAGDWHSTLRVNDDIALTSSRDILQSIGSSGE-------- 121
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
P++ G GW QL +E+ W +I
Sbjct: 122 PQEVLISLGYAGWTAGQLEDELAQNAWLTVPADLGII 158
>gi|345015554|ref|YP_004817908.1| hypothetical protein [Streptomyces violaceusniger Tu 4113]
gi|344041903|gb|AEM87628.1| UPF0301 protein yqgE [Streptomyces violaceusniger Tu 4113]
Length = 195
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 70/160 (43%), Gaps = 16/160 (10%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + ++ + + AG
Sbjct: 9 GRLLVATPALADPN-FDRAVVLLLDHDEEGSLGVVLNRPTPVGVGDILQSWAELAGEPGV 67
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGC-------AAEMV 235
+F GGP+ L S G G+SG E G + G A +
Sbjct: 68 --VFQGGPVS----LDSALGVAVVPGESGRSAARTEEGPLGWRRVHGAIGLVDLEAPPEL 121
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
AVG R F G GW QL +E+ G W V P
Sbjct: 122 LAAAVG--SLRIFAGYAGWGPGQLEDELAEGAWYVVESEP 159
>gi|305681548|ref|ZP_07404354.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
gi|305658708|gb|EFM48209.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
Length = 201
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 17/179 (9%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
EP G LL+A + F RTV+L+L + G+ L +++ + +D
Sbjct: 16 EEPAAGKLLVAAPGMQSTA-FSRTVVLLLEHDANTTFGVDLAHRMDIAVANVLPDWVDCI 74
Query: 178 GTFSDRPLFFGGPLEE----GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
+ ++ GGP+ G+ + P ++ F+++ L +G
Sbjct: 75 S--KPQAMYAGGPVSPQSAVGVCVTKPDL---DINSRPYFKKLANRLAL---VDLGAPPS 126
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
VK + G R F G W QL+EEI AG W VA C PS + +G++ +W +++
Sbjct: 127 EVKADITG---MRMFIGYAEWSPGQLDEEIAAGEWYVAPCLPSDV-TAAGSVDIWGDVM 181
>gi|254282056|ref|ZP_04957024.1| conserved hypothetical protein [gamma proteobacterium NOR51-B]
gi|219678259|gb|EED34608.1| conserved hypothetical protein [gamma proteobacterium NOR51-B]
Length = 200
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LD 175
I + +G LLIAT L+ V F R+V + G GI++N+P +S+ ++ + +
Sbjct: 17 IGDSLRGQLLIATPALN-VGFFARSVTYLCEHGEAGAMGIVINQPLDLSVVDILEHLEII 75
Query: 176 AAGTFSDRPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
A+G+ + P+ GGP ++ G L S +G D +V G+ T + + A
Sbjct: 76 ASGSLLEEPILAGGPVDVDHGFVLHSAEGEWD------ASLEVTAGICMTTSQDILAAI- 128
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
+ GP+ G GW QL E+ + W A
Sbjct: 129 ---AHGAGPKKRLIALGYAGWGPGQLEAELASNSWITA 163
>gi|167627981|ref|YP_001678481.1| hypothetical protein Fphi_1754 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254877070|ref|ZP_05249780.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|189039002|sp|B0U0F0.1|Y1759_FRAP2 RecName: Full=UPF0301 protein Fphi_1754
gi|167597982|gb|ABZ87980.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254843091|gb|EET21505.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 193
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAA 177
+ K +L+AT + IF ++VI + + G G+I+N+P +++++ + +
Sbjct: 3 QNHKSEILLATPLIKDDAIFTKSVIYLCQNDRHGAMGLIINKPLSDTLRDVFEELEISHH 62
Query: 178 GTFS---DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
TF+ D PL+ GGP+ ++ G + + EGL + + ++
Sbjct: 63 NTFNEILDYPLYMGGPISPHKIMILHTTNGRNYSSTIKLD---EGL------AITASMDI 113
Query: 235 VKR--NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
++ N + PE F G W +QL +EI++ W V
Sbjct: 114 LEDLANNILPEYFLPVVGYSCWTADQLTDEIKSNDWIVT 152
>gi|428182032|gb|EKX50894.1| hypothetical protein GUITHDRAFT_103478 [Guillardia theta CCMP2712]
Length = 404
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 75/208 (36%), Gaps = 29/208 (13%)
Query: 78 RLVAAEQVIRPQVQEPSVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIAT-EKLDGVH 136
RL + +RP V S +V S W EP GC+L+A+ E++D H
Sbjct: 79 RLRPSATCLRPSVARRSAL--LSVQASSDGSSQGVWREGSVEP--GCVLVASPEEVD--H 132
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEGLF 196
F V+L+L G G++L + ++EM F PL E
Sbjct: 133 FFRHAVVLLLEHSDGGSKGVVLEMATAFMLQEMAPAA------------FLEHPLGENSL 180
Query: 197 LVSPKGGGDEVGKSGVFEQVM-------EGLYFGTKETVGCAAEMVKRNAVGPEDFRFFD 249
G D+V E V G++ G + V E+V + +FF
Sbjct: 181 FRGGSSGNDKVIMLHALEDVQTSKPIGRHGVFAGGMQEV---KELVSEGRASSDQVKFFF 237
Query: 250 GCCGWEKEQLNEEIRAGYWTVAACSPSV 277
C W QL EI W V P +
Sbjct: 238 NHCEWLPGQLEREIEQKTWRVGFIPPQL 265
>gi|91782033|ref|YP_557239.1| hypothetical protein Bxe_A3811 [Burkholderia xenovorans LB400]
gi|91685987|gb|ABE29187.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
Length = 221
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 60/146 (41%), Gaps = 14/146 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGPL--E 192
F TV+ + G G+++NRP+ + ++ + S + L+ P++FGGP+ E
Sbjct: 55 FSGTVVYLCDHSERGALGLVINRPTDIDLQALFSRIDLKLEIEPLLH-VPVYFGGPVQTE 113
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
G L PK G V GL T + V A + GPE F G
Sbjct: 114 RGFVLHDPKDGNAYTSSM----SVPGGLEMTTSKDVLEAVA----SGTGPERFLLTLGHA 165
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVI 278
GW QL EEI W P ++
Sbjct: 166 GWGAGQLEEEISKNGWLTVEADPKIV 191
>gi|88812470|ref|ZP_01127719.1| hypothetical protein NB231_13306 [Nitrococcus mobilis Nb-231]
gi|88790256|gb|EAR21374.1| hypothetical protein NB231_13306 [Nitrococcus mobilis Nb-231]
Length = 187
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 18/147 (12%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV--LDAAGTFSDRPLFFGGPL--EE 193
F +TV I G GI++NRPS +++ E+ + + +A T +P++ GGP+ E
Sbjct: 23 FAQTVAYICEHNADGALGIVINRPSELTLAELFTHMGFGEAPRTIGAQPVYVGGPVQRER 82
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV--GPEDFRFFDGC 251
G L SP G D + V E+V T+ + ++++ A GP+ + G
Sbjct: 83 GFVLHSPAGKWDSSLR--VSEEV----------TITTSRDILEALAQGEGPKQYLVALGY 130
Query: 252 CGWEKEQLNEEIRAGYWTVAACSPSVI 278
GW QL E+ W P++I
Sbjct: 131 AGWGTGQLEYEMAQNAWLSGPPDPTII 157
>gi|440695051|ref|ZP_20877610.1| hypothetical protein STRTUCAR8_04394 [Streptomyces turgidiscabies
Car8]
gi|440282858|gb|ELP70257.1| hypothetical protein STRTUCAR8_04394 [Streptomyces turgidiscabies
Car8]
Length = 194
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + + +L+ +
Sbjct: 12 GRLLVATPALADPN-FDRAVVLLLDHDEKGSVGVVLNRPTPVEVGD----ILEGWAELAG 66
Query: 183 RP--LFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
P +F GGP L+ L + GGG ++ + + + G G + + K
Sbjct: 67 EPGVVFQGGPVSLDSALGVAVIPGGGGSGERTPLGWRRVHG-AIGVVDLEAPPELLAK-- 123
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
A+G R F G GW QL +E+ G W V P + + LW E+L
Sbjct: 124 ALG--SLRIFAGYSGWGPGQLEDELADGAWYVVESEPGDVSCPAPER-LWREVL 174
>gi|393787977|ref|ZP_10376108.1| UPF0301 protein [Bacteroides nordii CL02T12C05]
gi|392656190|gb|EIY49829.1| UPF0301 protein [Bacteroides nordii CL02T12C05]
Length = 197
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 21/183 (11%)
Query: 120 PEKGCLLIATEKL-DGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
P +G +LI+ L D F R+V+L++ G G+I+N+ + + + V+
Sbjct: 18 PSRGKILISEPFLCDAT--FGRSVVLLVDHTDEGSMGLIMNK----QLPLLVNDVIKEFK 71
Query: 179 TFSDRPLFFGGPL-EEGLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
D PL+ GGP+ + LF + P G V +GLY + ++
Sbjct: 72 YLEDIPLYKGGPIGTDTLFYLHTLPHIPGA--------LHVNKGLYL-NGDFDALKKHIL 122
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLM 295
+ N + + RFF G GWE EQL +EI+ W +A S + L +W+ L +
Sbjct: 123 QGNNINGK-VRFFLGYSGWEYEQLIQEIKENTWLIAKEEASYL-LNGEAKDMWKNTLGKL 180
Query: 296 GRR 298
G +
Sbjct: 181 GSK 183
>gi|319787650|ref|YP_004147125.1| hypothetical protein Psesu_2058 [Pseudoxanthomonas suwonensis 11-1]
gi|317466162|gb|ADV27894.1| protein of unknown function DUF179 [Pseudoxanthomonas suwonensis
11-1]
Length = 188
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 14/145 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV----LDAAGTFSDRPLFFGGPLEE 193
F RTV L+ + G G+++NRPS ++ ++ + + DAA RP+ GGP+ +
Sbjct: 24 FARTVALVCQHDDDGAMGVVVNRPSEYTLGQVLAQMGIGSEDAA--LCARPVLHGGPVHQ 81
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
V GG + S + +V +GLY T V A + GP + GC G
Sbjct: 82 ERGFVIHDGG--QAWDSSL--KVADGLYLTTSRDVLEAMAAGE----GPVNAIVALGCAG 133
Query: 254 WEKEQLNEEIRAGYWTVAACSPSVI 278
W QL E+ W V+
Sbjct: 134 WGAGQLEHELSENTWLTVPADAGVL 158
>gi|311743602|ref|ZP_07717408.1| possible transcriptional regulator [Aeromicrobium marinum DSM
15272]
gi|311312732|gb|EFQ82643.1| possible transcriptional regulator [Aeromicrobium marinum DSM
15272]
Length = 184
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 21/176 (11%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
+G LL+AT ++ +F R+V+ ++ + G G+I+NRP + ++ +D+ S
Sbjct: 5 RGRLLVATSAIES-GVFWRSVVYLIEHDADGALGVIVNRPLDADVDDVLPDWVDS--VIS 61
Query: 182 DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
LF GGP+ D G+ + G + T G +V +A
Sbjct: 62 PGCLFEGGPV-----------AADAALALGILPESPPSDPPGWRRTDGLVG-LVDLDAPP 109
Query: 242 PE--DFR---FFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
P DFR F G GW QL +E+ W V A P + L LW ++L
Sbjct: 110 PAAGDFRGVRVFAGYAGWGPGQLEDEVAESSWMVVAADPEDL-LSPHPDTLWRQVL 164
>gi|402758733|ref|ZP_10860989.1| hypothetical protein ANCT7_13697 [Acinetobacter sp. NCTC 7422]
Length = 184
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 65/157 (41%), Gaps = 14/157 (8%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
CL+ + D F TVI + + G GII+NRPS + IKE+ + + A
Sbjct: 10 CLIAPPDMADD--FFANTVIYVARHDEDGAQGIIINRPSDLQIKELLNDLEIDADNVHPH 67
Query: 184 PLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ GGPL E G L + G S + V E + T + + A + VG
Sbjct: 68 AVLQGGPLRPEAGFVLHT----GQPTWHSSI--AVGENVCITTSKDILDA--IAHNEGVG 119
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
++ G W K QL EEI G W + +I
Sbjct: 120 R--YQIALGYASWSKNQLEEEIARGDWLICESDMDLI 154
>gi|187479482|ref|YP_787507.1| hypothetical protein BAV3012 [Bordetella avium 197N]
gi|119391959|sp|Q2KUT1.1|Y3012_BORA1 RecName: Full=UPF0301 protein BAV3012
gi|115424069|emb|CAJ50622.1| conserved hypothetical protein [Bordetella avium 197N]
Length = 197
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 59/142 (41%), Gaps = 15/142 (10%)
Query: 141 TVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPLE--EGLF 196
TVI I P G G++LNRP+ +++ + R + A G +D +FFGGP++ G
Sbjct: 37 TVIYICEHTPRGALGLVLNRPTDLTLASLFERIDLTVAMGPTADEKVFFGGPVQTDRGFV 96
Query: 197 LVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEK 256
L +P G + G +++ + AE GP G GW
Sbjct: 97 LHAPAGDYSSSIRLGDLALTT------SRDVLQAVAE-----GQGPARLFVTLGYAGWGA 145
Query: 257 EQLNEEIRAGYWTVAACSPSVI 278
QL E+ W A P +I
Sbjct: 146 GQLESEMSQNAWLSVAADPVII 167
>gi|323525006|ref|YP_004227159.1| hypothetical protein BC1001_0645 [Burkholderia sp. CCGE1001]
gi|407712388|ref|YP_006832953.1| transcriptional regulator [Burkholderia phenoliruptrix BR3459a]
gi|323382008|gb|ADX54099.1| protein of unknown function DUF179 [Burkholderia sp. CCGE1001]
gi|407234572|gb|AFT84771.1| transcriptional regulator [Burkholderia phenoliruptrix BR3459a]
Length = 192
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 60/146 (41%), Gaps = 14/146 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGPL--E 192
F TV+ + G G+++NRP+ + ++ + S + L+ P++FGGP+ E
Sbjct: 26 FSGTVVYLCDHSERGALGLVINRPTDIDLQALFSRIDLKLEIEPLLH-VPVYFGGPVQTE 84
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
G L PK G V GL T + V A + GPE F G
Sbjct: 85 RGFVLHDPKDGNSYTSSM----SVPGGLEMTTSKDVLEAVA----SGTGPERFLLTLGHA 136
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVI 278
GW QL EEI W P ++
Sbjct: 137 GWGAGQLEEEISKNGWLTVEADPKIV 162
>gi|253990751|ref|YP_003042107.1| conserved hypothetical protein [Photorhabdus asymbiotica]
gi|211639082|emb|CAR67694.1| Hypothetical Protein yqgE [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782201|emb|CAQ85365.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 187
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 20/180 (11%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRP-SLMSIK----EMRSTVLDAAGT 179
LIA L + F+R+V+ I G G+++N+P +S++ +++ + D +
Sbjct: 7 FLIAMPSLSDPY-FKRSVVYICEHNENGAMGLVINKPIEQISVRKVLQKLKISPEDQDES 65
Query: 180 FS-DRPLFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
+ ++P+ GGPL E G L +PK G K + + M ET+G +
Sbjct: 66 INLNKPVMTGGPLAEDHGFILHTPKPGFSSSIK--ISDDTMITTSKDVLETLGTPRQ--- 120
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
P+ G WEK QL +EI W A P +I S W E L+G
Sbjct: 121 -----PKQVLVTLGYASWEKGQLEKEIMENSWLTANADPHII-FNSPIADRWREAASLLG 174
>gi|387896144|ref|YP_006326441.1| hypothetical protein PflA506_5053 [Pseudomonas fluorescens A506]
gi|387162244|gb|AFJ57443.1| protein of unknown function, AlgH family [Pseudomonas fluorescens
A506]
Length = 189
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 14/145 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRP---SLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEG 194
F +T+ I+ G G+++NRP +L I E +D P++FGGP++
Sbjct: 25 FAQTLTYIVEHTANGAMGLVVNRPQELNLADILEQLRPEIDPPARCQGVPIYFGGPVQTD 84
Query: 195 L-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
F++ P G + ++G+ T + V A + +GPE G G
Sbjct: 85 RGFVLHPTGPTFQATVD------LDGVSLSTSQDVLFAIA----DGIGPEQSVITLGYAG 134
Query: 254 WEKEQLNEEIRAGYWTVAACSPSVI 278
WE QL E+ + W P ++
Sbjct: 135 WEAGQLEAELASNAWLTCPFDPDIL 159
>gi|194333610|ref|YP_002015470.1| hypothetical protein Paes_0776 [Prosthecochloris aestuarii DSM 271]
gi|194311428|gb|ACF45823.1| protein of unknown function DUF179 [Prosthecochloris aestuarii DSM
271]
Length = 187
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 13/142 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPLE-EGLF 196
F RTV+L+ G G ILNRP + + E S D D L+ GGP++ + +
Sbjct: 25 FRRTVLLMCEHNEEGSLGFILNRPLEVKVSEAISGFEDL-----DISLYMGGPVQVDTVH 79
Query: 197 LVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEK 256
+ +G D + G E + G KE + + ++ + + RF+ G GW
Sbjct: 80 YLHTRG--DLI--DGCIEICPGVFWGGDKEQL---SSLMNSGVIDSSEIRFYLGYAGWSA 132
Query: 257 EQLNEEIRAGYWTVAACSPSVI 278
QL E R G W S ++
Sbjct: 133 GQLESEFRDGSWYTTEASRDIV 154
>gi|392404360|ref|YP_006440972.1| protein of unknown function DUF179 [Turneriella parva DSM 21527]
gi|390612314|gb|AFM13466.1| protein of unknown function DUF179 [Turneriella parva DSM 21527]
Length = 172
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 28/172 (16%)
Query: 122 KGCLLIATEK-LDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
KG LL+A+ LDG F R+V+LI+ + G GI+LN P L G
Sbjct: 8 KGKLLVASSAILDGS--FNRSVVLIIDHDSRGSLGIVLNHP------------LPGDGG- 52
Query: 181 SDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
PL+ GGP++ + G ++++G++F + + +++ A
Sbjct: 53 RKHPLYQGGPVDP-----DQRSLLHSAGHLASSNEIVDGVHFESSD------DLLTELAA 101
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+R + G GW QL E+R W V +I G LW + L
Sbjct: 102 TDSAYRRYAGYAGWATGQLEYELRTQSWFVLEARADLIFHNDG-YDLWRKCL 152
>gi|15603911|ref|NP_220426.1| hypothetical protein RP032 [Rickettsia prowazekii str. Madrid E]
gi|383486887|ref|YP_005404567.1| hypothetical protein MA5_01515 [Rickettsia prowazekii str. GvV257]
gi|383487461|ref|YP_005405140.1| hypothetical protein M9W_00145 [Rickettsia prowazekii str.
Chernikova]
gi|383488307|ref|YP_005405985.1| hypothetical protein M9Y_00145 [Rickettsia prowazekii str.
Katsinyian]
gi|383489151|ref|YP_005406828.1| hypothetical protein MA3_00150 [Rickettsia prowazekii str. Dachau]
gi|383499285|ref|YP_005412646.1| hypothetical protein MA1_00145 [Rickettsia prowazekii str.
BuV67-CWPP]
gi|383500126|ref|YP_005413486.1| hypothetical protein MA7_00145 [Rickettsia prowazekii str. RpGvF24]
gi|386081864|ref|YP_005998441.1| Putative transcriptional regulator [Rickettsia prowazekii str.
Rp22]
gi|46577574|sp|Q9ZEB3.1|Y032_RICPR RecName: Full=UPF0301 protein RP032
gi|3860602|emb|CAA14503.1| unknown [Rickettsia prowazekii str. Madrid E]
gi|292571628|gb|ADE29543.1| Putative transcriptional regulator [Rickettsia prowazekii str.
Rp22]
gi|380757252|gb|AFE52489.1| hypothetical protein MA5_01515 [Rickettsia prowazekii str. GvV257]
gi|380757823|gb|AFE53059.1| hypothetical protein MA7_00145 [Rickettsia prowazekii str. RpGvF24]
gi|380760340|gb|AFE48862.1| hypothetical protein M9W_00145 [Rickettsia prowazekii str.
Chernikova]
gi|380761186|gb|AFE49707.1| hypothetical protein M9Y_00145 [Rickettsia prowazekii str.
Katsinyian]
gi|380762031|gb|AFE50551.1| hypothetical protein MA1_00145 [Rickettsia prowazekii str.
BuV67-CWPP]
gi|380762874|gb|AFE51393.1| hypothetical protein MA3_00150 [Rickettsia prowazekii str. Dachau]
Length = 189
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 73/183 (39%), Gaps = 33/183 (18%)
Query: 111 DKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR-------PSL 163
DK H + G L+AT + I+ +++I +LS G G+I NR S
Sbjct: 3 DKIFHNL----SGKTLVATPYVITKGIYHKSLIYMLSHTEEGAIGLIFNRLVNHVDLKSF 58
Query: 164 MSIKEMRSTVLDAAGTFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLY 221
IKE + T P++ GGP+ E+G FL S + + L
Sbjct: 59 FKIKEDKITSQVMV------PIYLGGPIEHEKGFFLHSRDYNKNLL------------LD 100
Query: 222 FGTKETVGCAAEMVKRNAV--GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIG 279
F V E+ + A GP++ F G W+ QL EE+ W V CS I
Sbjct: 101 FHNDLAVSSNLEISEDIAFGKGPKNSLFIVGYTAWKPGQLEEELEKNLWLVMDCSKEFIF 160
Query: 280 LES 282
E+
Sbjct: 161 AEN 163
>gi|254491259|ref|ZP_05104440.1| conserved hypothetical protein [Methylophaga thiooxidans DMS010]
gi|224463772|gb|EEF80040.1| conserved hypothetical protein [Methylophaga thiooxydans DMS010]
Length = 186
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKEMRS--TVLDAAGTFSDRPLFFGGPLEEG 194
F R+V+ + + G G+I+NRP+ + ++E+ + + + A + P+ FGGP+++G
Sbjct: 20 FFYRSVVYLCEHDQNGAMGLIINRPTRVMLEELLNHLKIENHADSLKTTPVLFGGPVQKG 79
Query: 195 LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGW 254
+V E S Q+ + ++ T + E + + GPE G GW
Sbjct: 80 QGMVIHDQQRSEWKSS---LQLADDIFLTTSTDI---LEAIGSDN-GPEHALVTLGYAGW 132
Query: 255 EKEQLNEEIRAGYW 268
E QL +E+ W
Sbjct: 133 EAGQLEQELAKNSW 146
>gi|359442829|ref|ZP_09232688.1| UPF0301 protein PSHAa2600 [Pseudoalteromonas sp. BSi20429]
gi|392533387|ref|ZP_10280524.1| hypothetical protein ParcA3_05084 [Pseudoalteromonas arctica A
37-1-2]
gi|358035328|dbj|GAA68937.1| UPF0301 protein PSHAa2600 [Pseudoalteromonas sp. BSi20429]
Length = 185
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 16/164 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVL---DAAGTFSDRPLFFGGPL--E 192
F+R V I G G+++N+P +++ E+ + D + +F GGP+ +
Sbjct: 20 FKRAVTYICEHNEDGAMGLVINQPIDVTVGELLDKIEIDNDKTQNAAKVSVFAGGPVKTD 79
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
G L SP+ G +++ + T + V + A PE F G
Sbjct: 80 RGFVLHSPQSG------YSASQKLSSDIMITTSKDVLASL----TTAQAPEQFIITLGYS 129
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GWE+ QL +E+ W + P +I ++ WE+ + ++G
Sbjct: 130 GWEQGQLEQELLDNSWLIIEADPKII-FDTPVEKRWEKAVSMLG 172
>gi|442770922|gb|AGC71624.1| protein of unknown function DUF179 [uncultured bacterium
A1Q1_fos_1053]
Length = 182
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 74/181 (40%), Gaps = 33/181 (18%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
+G LL+AT ++G F R+VI +L + G GIILN P +I E+ ++
Sbjct: 5 RGQLLVATSVIEGEPFF-RSVIYLLDSDEHGAVGIILNYPLDPNIDELFPQWSESV---- 59
Query: 182 DRP--LFFGGPLEEGLFL--------VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCA 231
DRP L+ GGP++ + +P G G+ G+ + FG C
Sbjct: 60 DRPGTLYLGGPVDTQSAMAVGIAREGTTPAGWQSANGRIGIVDLDGPVPSFGD---FAC- 115
Query: 232 AEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEEL 291
R + G GW QL EI G W V S + + T LW E+
Sbjct: 116 -------------LRLYAGYAGWSAGQLEAEIAEGSWLVVPALESDL-QHADTSSLWREV 161
Query: 292 L 292
L
Sbjct: 162 L 162
>gi|387790917|ref|YP_006255982.1| putative transcriptional regulator [Solitalea canadensis DSM 3403]
gi|379653750|gb|AFD06806.1| putative transcriptional regulator [Solitalea canadensis DSM 3403]
Length = 185
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 21/164 (12%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P G LLI +E F+R+V+ I G G +LN+ + +++ + V D
Sbjct: 6 KPTAGKLLI-SEPFMADPNFKRSVVYITEHNENGTVGFVLNQKTELTLDNLVDDVED--- 61
Query: 179 TFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE----M 234
+D P++ GGP+ G D + E + G+ G G E M
Sbjct: 62 --TDFPVYIGGPV-----------GNDSLHYIHTLENLEGGVPVGNDVFWGGNFELLKIM 108
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
++ V RFF G GW + QL E+ W VA +
Sbjct: 109 IQAGQVERGQIRFFIGYSGWGETQLQNELDENAWLVAESKKEFL 152
>gi|357020464|ref|ZP_09082695.1| hypothetical protein KEK_10658 [Mycobacterium thermoresistibile
ATCC 19527]
gi|356478212|gb|EHI11349.1| hypothetical protein KEK_10658 [Mycobacterium thermoresistibile
ATCC 19527]
Length = 201
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 23/179 (12%)
Query: 121 EKGCLLIA-TEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
G LL+A T+ L+ F R+VI I+ G G++LNRPS ++ +L
Sbjct: 19 RSGTLLLANTDLLEPT--FRRSVIYIIEHNDGGTLGVVLNRPSETAVY----NILPQWAK 72
Query: 180 FSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
+ +P +F GGP+ + L L + G D G G+ G V A+
Sbjct: 73 LAAKPKTVFIGGPVKRDAALCLGKLRVGVDAAGVPGLRH------VQGRIVMVDLDAD-- 124
Query: 236 KRNAVGP--EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+AV P E R F G GW QL+ EI W V + PS + +E + LW +L
Sbjct: 125 -PDAVAPALEGIRIFAGYSGWTIGQLDGEIERDDWIVLSALPSDVLVEP-RVDLWGRVL 181
>gi|345852287|ref|ZP_08805234.1| hypothetical protein SZN_20961 [Streptomyces zinciresistens K42]
gi|345636250|gb|EGX57810.1| hypothetical protein SZN_20961 [Streptomyces zinciresistens K42]
Length = 190
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 77/174 (44%), Gaps = 16/174 (9%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + + +L+ +
Sbjct: 9 GRLLVATPALADPN-FDRAVVLLLDHDEEGSLGVVLNRPTPVGVGD----ILEGWAELAG 63
Query: 183 RP--LFFGGPLEEGLFLVSPKGGGDEVGKSGV--FEQVMEGLYFGTKETVGCAAEMVKRN 238
P +F GGP+ L GD G+S + +V + E A +
Sbjct: 64 EPGVVFQGGPVSLDSALGVAVIPGDAAGESAPLGWRRVHGAIGLVDLE----APPELLAP 119
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
AVG R F G GW QL +E+ G W V P I S LW E+L
Sbjct: 120 AVG--SLRIFAGYAGWGPGQLEDELVEGAWYVVESEPGDISSPSPER-LWREVL 170
>gi|442770551|gb|AGC71263.1| protein of unknown function DUF179 [uncultured bacterium
A1Q1_fos_140]
Length = 185
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 16/155 (10%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ P G LL+A+ +++ + F TV+L+L + P G G++LNRP+ + + L+
Sbjct: 1 MQTPAAGMLLVASPEMNDPN-FAGTVVLLLEVNPEGALGVVLNRPTPIPVD----AALEG 55
Query: 177 AGTFSDRP--LFFGGPLEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
+P LF GGP E L V +E S F ++ +GL +T E
Sbjct: 56 WEDMVSQPPKLFAGGPCEPNAALAVGRPINPNEPPIS--FSKIADGLGMIELDT---PPE 110
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYW 268
++ + G R F G GW QL E+ W
Sbjct: 111 LIASSLSG---LRIFAGYAGWGAGQLESELEEEAW 142
>gi|258655491|ref|YP_003204647.1| hypothetical protein Namu_5395 [Nakamurella multipartita DSM 44233]
gi|258558716|gb|ACV81658.1| protein of unknown function DUF179 [Nakamurella multipartita DSM
44233]
Length = 190
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 19/181 (10%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
I G LL+AT L H F RTV+ +++ G G+ILNRPS +++ VL
Sbjct: 4 IESLRAGMLLVATPGLRDPH-FRRTVVYLVAHSVDGTVGVILNRPSETAVQN----VLPG 58
Query: 177 AGTFSDRP--LFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
+ + RP +F GGP++ + +G + E ++
Sbjct: 59 WASHTARPHAVFAGGPVQTSAAMC--------LGVCRIGTNPREVQGVVGVTGPVVLVDL 110
Query: 235 VKRNAVGPEDF---RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEEL 291
A + R + G GW+ EQL +EI G W V P + L LW +
Sbjct: 111 DGDPATVTQSLRGIRIYAGRAGWDAEQLVDEIIEGSWYVVPGLPDDV-LAGPRTDLWFSV 169
Query: 292 L 292
L
Sbjct: 170 L 170
>gi|209364305|ref|YP_001425495.2| transcriptional regulator [Coxiella burnetii Dugway 5J108-111]
gi|212213537|ref|YP_002304473.1| transcriptional regulator [Coxiella burnetii CbuG_Q212]
gi|215919335|ref|NP_821063.2| transcriptional regulator [Coxiella burnetii RSA 493]
gi|218511890|sp|Q83A18.2|Y2093_COXBU RecName: Full=UPF0301 protein CBU_2093
gi|206584220|gb|AAO91577.2| transcriptional regulator [Coxiella burnetii RSA 493]
gi|207082238|gb|ABS77677.2| transcriptional regulator [Coxiella burnetii Dugway 5J108-111]
gi|212011947|gb|ACJ19328.1| transcriptional regulator [Coxiella burnetii CbuG_Q212]
Length = 194
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 28/179 (15%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRS--TVLDAAGTFSD 182
L+A +L+ F + VI + + G GII+NRP +++ ++ + A ++
Sbjct: 24 FLVAMPQLNDF-TFTKAVIYVSQHDAKGALGIIINRPLALTLGKVLEHLNIEIAQPQIAN 82
Query: 183 RPLFFGGPL-EEGLFLV----SPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
P+ GGP+ +E F+V SP+G E L +K+ + + + +
Sbjct: 83 HPVLMGGPIGQEHGFIVYEQESPQGA--------------EILLSASKDML----DDIAK 124
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
N GP+DF G GWE QL EI W V + ++ E+ W++ L+G
Sbjct: 125 NK-GPDDFLITLGYAGWEAGQLENEIARNDWLVVPFNRKIL-FETPLKSRWQKAAALIG 181
>gi|377574314|ref|ZP_09803345.1| hypothetical protein MOPEL_073_01510 [Mobilicoccus pelagius NBRC
104925]
gi|377537117|dbj|GAB48510.1| hypothetical protein MOPEL_073_01510 [Mobilicoccus pelagius NBRC
104925]
Length = 188
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 71/161 (44%), Gaps = 21/161 (13%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
G LL+A G +F R V+L+L + G G++LN+P I+ STVL A
Sbjct: 8 AGRLLVAAPGTGG-DVFHRGVVLVLHHDEDGAHGLVLNKP----IEADVSTVLPAWQEHV 62
Query: 182 DRP--LFFGGPL----EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
P LF GGP+ GL + G+ +G +F+++ G + + E+V
Sbjct: 63 VAPGRLFQGGPVGLDTALGLVRLEHDDAGEALGILPLFDRI------GVID-LDAPPEIV 115
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPS 276
+ R F G GW QL +E+ AG W V P
Sbjct: 116 VPHV---SAVRVFAGYSGWSSGQLEDELEAGAWFVVDARPG 153
>gi|418048657|ref|ZP_12686744.1| UPF0301 protein yqgE [Mycobacterium rhodesiae JS60]
gi|353189562|gb|EHB55072.1| UPF0301 protein yqgE [Mycobacterium rhodesiae JS60]
Length = 201
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 71/174 (40%), Gaps = 17/174 (9%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+A L F R+VI ++ G G++LNRPS ++ VL +
Sbjct: 21 GTLLLANTDLLE-PTFRRSVIYVVEHNDGGTLGVVLNRPSETAVY----NVLPQWAKLAA 75
Query: 183 RP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
+P +F GGP+ + L L + + G D G G+ + A V
Sbjct: 76 KPKTMFIGGPVKRDAALCLGTLRVGTDPQGMPGLRHVAGRMVMVDLDADPDLIAPAV--- 132
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
E R F G GW QL EI W V + PS + +E + LW +L
Sbjct: 133 ----EGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVEQ-RVDLWSRVL 181
>gi|325298174|ref|YP_004258091.1| hypothetical protein [Bacteroides salanitronis DSM 18170]
gi|324317727|gb|ADY35618.1| protein of unknown function DUF179 [Bacteroides salanitronis DSM
18170]
Length = 196
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 14/154 (9%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P G +LIA+ L H F R+VIL+++ G GI++N+ + + ++ +
Sbjct: 15 PHAGSILIASPLLYDYH-FARSVILMVTHNIEGSMGIVMNKNFRYHVS--LNQLVPRLAS 71
Query: 180 FSDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
P+F GGP++ + +F + G + G GLY T A + N
Sbjct: 72 MPVIPVFKGGPVDRDTIFFLHVLGNLEGALNLG------NGLYLNGDFT---ALQQYILN 122
Query: 239 AVGPEDF-RFFDGCCGWEKEQLNEEIRAGYWTVA 271
E + RFF G GW +QL +EI W V
Sbjct: 123 GNPIEGYVRFFSGYAGWAYKQLEKEIDDDSWMVG 156
>gi|312797108|ref|YP_004030030.1| transcriptional regulator, algH [Burkholderia rhizoxinica HKI 454]
gi|312168883|emb|CBW75886.1| Transcriptional regulator, algH [Burkholderia rhizoxinica HKI 454]
Length = 192
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 14/146 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGPL--E 192
F TV+ + G G+++NRP+ + ++ + S + L+ P++FGGP+ E
Sbjct: 26 FSGTVVYLCDHSERGAFGLVINRPTDIDLQALFSRIDLKLEIEPLLH-VPVYFGGPVQTE 84
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
G L P G G+ V GL T + V A N GP+ F G
Sbjct: 85 RGFVLHEPVGSGNYTSSM----SVPSGLEMTTSKDVLEAVA----NGNGPKRFLLTLGHA 136
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVI 278
GW QL +EI W P ++
Sbjct: 137 GWGAGQLEDEISKNGWLTVEADPKIV 162
>gi|307728795|ref|YP_003906019.1| hypothetical protein [Burkholderia sp. CCGE1003]
gi|307583330|gb|ADN56728.1| protein of unknown function DUF179 [Burkholderia sp. CCGE1003]
Length = 192
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 60/146 (41%), Gaps = 14/146 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGPL--E 192
F TV+ + G G+++NRP+ + ++ + S + L+ P++FGGP+ E
Sbjct: 26 FSGTVVYLCDHSERGALGLVINRPTDIDLQALFSRIDLKLEIEPLLH-VPVYFGGPVQTE 84
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
G L PK G V GL T + V A + GPE F G
Sbjct: 85 RGFVLHDPKDGNTYTSSM----SVPGGLEMTTSKDVLEAVA----SGTGPERFLLTLGHA 136
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVI 278
GW QL EEI W P ++
Sbjct: 137 GWGAGQLEEEISKNGWLTVEADPKIV 162
>gi|157825156|ref|YP_001492876.1| hypothetical protein A1C_00165 [Rickettsia akari str. Hartford]
gi|166231444|sp|A8GLU3.1|Y165_RICAH RecName: Full=UPF0301 protein A1C_00165
gi|157799114|gb|ABV74368.1| hypothetical protein A1C_00165 [Rickettsia akari str. Hartford]
Length = 189
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 72/175 (41%), Gaps = 21/175 (12%)
Query: 109 LGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR-PSLMSIK 167
+GDK H + L+AT + I+ +++I +LS G G+I NR + + +K
Sbjct: 1 MGDKIFHNL----SSKTLVATPHVITKGIYHKSLIYMLSHTEEGAIGLIFNRLVNHIDLK 56
Query: 168 EMRSTVLDAAGTFSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
D T P++ GGP+E +G FL S + + L F
Sbjct: 57 SFFKIKNDDITTPVMVPIYLGGPVEHEKGFFLHSSDYNKNLL------------LDFQND 104
Query: 226 ETVGCAAEMVKRNAVG--PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
V E+ + A G P++ F G W+ QL EE+ W V C+ I
Sbjct: 105 LAVSSNLEISEDIAFGKGPKNSLFIVGYTAWKPGQLEEELERNLWLVMDCNKEFI 159
>gi|56695211|ref|YP_165559.1| hypothetical protein SPO0296 [Ruegeria pomeroyi DSS-3]
gi|56676948|gb|AAV93614.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
Length = 194
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTF 180
G LLIA + G FER+VI + S G G+I+N+P+ +++ + + + ++
Sbjct: 15 GKLLIAMPGM-GDPRFERSVIFLCSHGEDGAMGLIVNKPADLNVSTLLEQLEIPSSSAAA 73
Query: 181 SDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
+ P+ GGP+E G L SP D GK +V +G F T+ ++ + N
Sbjct: 74 ARAPVRLGGPVEMARGFVLHSP----DYAGKLQSL-KVSDG--FVMTATLDILEDIARDN 126
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GP G GW QL EI W A P ++ S G WE L L+G
Sbjct: 127 --GPARAALMLGYSGWGPGQLEAEIGDNGWLTADADPDIV-FGSRDDGKWEAALKLLG 181
>gi|270159102|ref|ZP_06187758.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|289166063|ref|YP_003456201.1| hypothetical protein LLO_2740 [Legionella longbeachae NSW150]
gi|269987441|gb|EEZ93696.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|288859236|emb|CBJ13170.1| putative conserved hypothetical protein [Legionella longbeachae
NSW150]
Length = 187
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSL--MSIKEMRSTVLDAAGTFSD 182
LLIA L+ + FERTVI I G G+I+NRP +SI + + S
Sbjct: 11 LLIAMPSLNDPN-FERTVIYICEHHEQGSVGLIINRPMQFPLSIVFEQLHIEPIHSEQSC 69
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA--V 240
PL FGGP V P+ G + G + L+ + TV + ++++ A
Sbjct: 70 LPLMFGGP-------VQPERGFVIHKQLGTWRS---SLFLQEEVTVTTSNDIIRAIAEDK 119
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270
GP++ G GW + QL +EI W V
Sbjct: 120 GPKEVLITLGYAGWVEHQLEKEILENTWLV 149
>gi|359428383|ref|ZP_09219418.1| hypothetical protein ACT4_014_00620 [Acinetobacter sp. NBRC 100985]
gi|358236168|dbj|GAB00957.1| hypothetical protein ACT4_014_00620 [Acinetobacter sp. NBRC 100985]
Length = 184
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 65/157 (41%), Gaps = 14/157 (8%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
CL+ + D F TVI + + G GII+NRPS + IKE+ + + A
Sbjct: 10 CLIAPPDMADD--FFANTVIYVARHDEEGAQGIIINRPSELQIKELLNDLEIDADNVQPH 67
Query: 184 PLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ GGPL E G L + G S + V E + T + + A + VG
Sbjct: 68 AVLQGGPLRPEAGFVLHT----GQPTWHSSI--AVGENVCITTSKDILDA--IAHNEGVG 119
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
++ G W K QL EEI G W + +I
Sbjct: 120 R--YQIALGYASWSKNQLEEEIARGDWLICDSDMDLI 154
>gi|452951167|gb|EME56617.1| hypothetical protein H074_22149 [Amycolatopsis decaplanina DSM
44594]
Length = 193
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 78/182 (42%), Gaps = 17/182 (9%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
E E G LL+A + + F RTV+ ++ G G++LNRPS + + + VL G
Sbjct: 9 EVEPGTLLVAAPTMFDPN-FRRTVVFVIDHRDEGTLGVVLNRPSDVPVYD----VLPNWG 63
Query: 179 TFSDRP--LFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
P +F GGP+E+ L L + + G GV V + +T E+
Sbjct: 64 GHVAEPQSVFVGGPVEKKTALCLAALRTGETASSVPGVI-AVRGPVALVDLDT---DPEI 119
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWL 294
+ G R F G GW+ QL EI W + PS + L S LW ++L
Sbjct: 120 LVPKVRG---VRVFAGYAGWDSGQLANEIERDDWVIVPALPSDV-LASPHHDLWGQVLRR 175
Query: 295 MG 296
G
Sbjct: 176 QG 177
>gi|453050415|gb|EME97955.1| hypothetical protein H340_23993 [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 208
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 68/172 (39%), Gaps = 21/172 (12%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + + +L++ +
Sbjct: 9 GRLLVATPALADPN-FDRAVVLLLDHDEKGSLGVVLNRPTPVGVGD----ILESWAALAG 63
Query: 183 RP--LFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
P +F GGP+ L GDE GK G A+
Sbjct: 64 EPGVVFQGGPVSLDSALGVAVVPGDEPGKDAPAGGPPGSGPARRPGRSGPVGWRRVHGAI 123
Query: 241 G-------PE-------DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G PE R F G GW QL EE+ G W V P I
Sbjct: 124 GLVDLEAPPELLGSSVGSLRIFAGYSGWGPGQLEEELVEGAWYVVESEPGDI 175
>gi|187922871|ref|YP_001894513.1| hypothetical protein Bphyt_0868 [Burkholderia phytofirmans PsJN]
gi|385206612|ref|ZP_10033480.1| putative transcriptional regulator [Burkholderia sp. Ch1-1]
gi|118573356|sp|Q144Q2.2|Y0649_BURXL RecName: Full=UPF0301 protein Bxeno_A0649
gi|226695995|sp|B2T0I4.1|Y868_BURPP RecName: Full=UPF0301 protein Bphyt_0868
gi|187714065|gb|ACD15289.1| protein of unknown function DUF179 [Burkholderia phytofirmans PsJN]
gi|385178950|gb|EIF28226.1| putative transcriptional regulator [Burkholderia sp. Ch1-1]
Length = 192
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 60/146 (41%), Gaps = 14/146 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGPL--E 192
F TV+ + G G+++NRP+ + ++ + S + L+ P++FGGP+ E
Sbjct: 26 FSGTVVYLCDHSERGALGLVINRPTDIDLQALFSRIDLKLEIEPLLH-VPVYFGGPVQTE 84
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
G L PK G V GL T + V A + GPE F G
Sbjct: 85 RGFVLHDPKDGNAYTSSM----SVPGGLEMTTSKDVLEAVA----SGTGPERFLLTLGHA 136
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVI 278
GW QL EEI W P ++
Sbjct: 137 GWGAGQLEEEISKNGWLTVEADPKIV 162
>gi|262280745|ref|ZP_06058528.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|299771797|ref|YP_003733823.1| hypothetical protein AOLE_17830 [Acinetobacter oleivorans DR1]
gi|262257645|gb|EEY76380.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|298701885|gb|ADI92450.1| hypothetical protein AOLE_17830 [Acinetobacter oleivorans DR1]
Length = 184
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 66/157 (42%), Gaps = 14/157 (8%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
CL+ E D F TVI + + G GII+NRPS + IKE+ + + A +
Sbjct: 10 CLIAPPEMADD--FFANTVIYLARHDEEGAQGIIINRPSGIQIKELLNDLDIEADNVNPH 67
Query: 184 PLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ GGPL E G L + G S + V E + T + + A + VG
Sbjct: 68 AVLQGGPLRPEAGFVLHT----GQPTWHSSI--AVGENVCITTSKDILDA--IAHNEGVG 119
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
++ G W K QL +EI G W + +I
Sbjct: 120 R--YQIALGYASWSKNQLEDEITRGDWLICDADMDLI 154
>gi|291298250|ref|YP_003509528.1| hypothetical protein Snas_0723 [Stackebrandtia nassauensis DSM
44728]
gi|290567470|gb|ADD40435.1| protein of unknown function DUF179 [Stackebrandtia nassauensis DSM
44728]
Length = 196
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + FERTV+L++S E G G++LNR + + + E VL +
Sbjct: 18 GRLLVATPALQDPN-FERTVVLLVSHESAGALGVVLNRATEVPVAE----VLGDWSELAR 72
Query: 183 RP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
P LF GGP+ E + L + G VG+ F+ L GT + + R
Sbjct: 73 EPAVLFEGGPVQPEAAIALGWMRSG---VGEPSCFKPFAGRL--GTLDLSVDPEPLADRL 127
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270
E R F G W QL++E++ G W V
Sbjct: 128 ----EGMRVFAGYSSWGAGQLDDELKDGAWMV 155
>gi|157803217|ref|YP_001491766.1| hypothetical protein A1E_00140 [Rickettsia canadensis str. McKiel]
gi|379022431|ref|YP_005299092.1| hypothetical protein RCA_00135 [Rickettsia canadensis str. CA410]
gi|166227759|sp|A8EX98.1|Y140_RICCK RecName: Full=UPF0301 protein A1E_00140
gi|157784480|gb|ABV72981.1| hypothetical protein A1E_00140 [Rickettsia canadensis str. McKiel]
gi|376323369|gb|AFB20610.1| hypothetical protein RCA_00135 [Rickettsia canadensis str. CA410]
Length = 189
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 71/175 (40%), Gaps = 21/175 (12%)
Query: 109 LGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR-PSLMSIK 167
+ DK H + G L+AT + I+ +++I +LS G G+I NR + + +K
Sbjct: 1 MSDKIFHNL----SGKTLVATPHVITKGIYHKSLIYMLSHTEEGAIGLIFNRLVNHIDLK 56
Query: 168 EMRSTVLDAAGTFSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
D P++ GGP+E +G FL S + + L F
Sbjct: 57 SFFKIKNDEITNPVMVPIYLGGPVEHEKGFFLHSSDYNKNLL------------LDFHND 104
Query: 226 ETVGCAAEMVKRNAVG--PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
V E+ + A G P++ F G W+ QL EE+ W V C+ I
Sbjct: 105 LAVSSNLEISEDIAFGKGPKNSLFIVGYTAWKSGQLEEELEKNLWLVMDCNKEFI 159
>gi|385808568|ref|YP_005844965.1| hypothetical protein Cp267_2171 [Corynebacterium pseudotuberculosis
267]
gi|383805961|gb|AFH53040.1| Hypothetical protein Cp267_2171 [Corynebacterium pseudotuberculosis
267]
Length = 201
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
++P G LLIA ++ +F R+VIL+L G+ L + +++ V+
Sbjct: 16 NQPAPGMLLIAAPSMED-PVFARSVILLLEHNEATTFGVNLASRNSVAV----FNVMPEW 70
Query: 178 GTFSDRP--LFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
+P L+ GGPL ++G+ + G ++ F ++ L T E
Sbjct: 71 APLVSKPQALYIGGPLNQQGVIGIGVSAPGVDIVSHPHFNRLANRLVHVDLRT---QPED 127
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
V + G R F G WE QLNEEI G W VA S + +G + +W +++
Sbjct: 128 VAADLSG---LRLFAGYAEWEPGQLNEEIEKGEWYVAPALSSDV-TAAGNVDVWGDVM 181
>gi|333929057|ref|YP_004502636.1| hypothetical protein SerAS12_4231 [Serratia sp. AS12]
gi|333934010|ref|YP_004507588.1| hypothetical protein SerAS9_4230 [Serratia plymuthica AS9]
gi|386330880|ref|YP_006027050.1| hypothetical protein [Serratia sp. AS13]
gi|333475617|gb|AEF47327.1| UPF0301 protein yqgE [Serratia plymuthica AS9]
gi|333493117|gb|AEF52279.1| UPF0301 protein yqgE [Serratia sp. AS12]
gi|333963213|gb|AEG29986.1| UPF0301 protein yqgE [Serratia sp. AS13]
Length = 187
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 23/169 (13%)
Query: 138 FERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGGP 190
F+R+VI + G G+++N+P +++S ++ + A + DRP+F GGP
Sbjct: 19 FKRSVIYVCEHNEEGAMGLVINKPVEQFTVETVLSKLKIMPPARNPAISL-DRPIFAGGP 77
Query: 191 L--EEGLFLVSPKGGGDEVGKS-GVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRF 247
L + G L +P+ G G S + M ET+G + P+D
Sbjct: 78 LADDRGFILHTPRSG---FGSSIQISPDTMITTSKDVLETLGTPEQ--------PDDVLV 126
Query: 248 FDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G GWEK QL +E+ W ++ + W E L+G
Sbjct: 127 ALGYAGWEKGQLEQEVLENAWLTIEADTDIL-FHTPIASRWREAANLLG 174
>gi|293373053|ref|ZP_06619422.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
gi|292632121|gb|EFF50730.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
Length = 207
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 33/189 (17%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR--PSLMSIKEMRSTVLDAA 177
P +G +LI+ L F R+VIL++ G G+++N+ P ++ M LD
Sbjct: 28 PSRGRILISEPFLRDA-TFGRSVILLVDHTDEGSMGLVINKQLPLFLNDIIMEFKYLDEI 86
Query: 178 GTFSDRPLFFGGPL-EEGLFLV---SPKGGGDEVGK----SGVFEQVMEGLYFGTKETVG 229
PL+ GGP+ + LF + S G + K +G F+++ + + G K +
Sbjct: 87 ------PLYKGGPIATDTLFYLHTLSDIPGSISISKGLYLNGDFDEIKKYILQGNKIS-- 138
Query: 230 CAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWE 289
E RFF G GW+ EQL+ EIR W V+ S + +++ +W
Sbjct: 139 -------------ECIRFFLGYSGWDSEQLSNEIRENTWLVSEEEKSYL-MKNNIKDMWR 184
Query: 290 ELLWLMGRR 298
+ L +G +
Sbjct: 185 KALEKLGSK 193
>gi|15826889|ref|NP_301152.1| hypothetical protein ML0028 [Mycobacterium leprae TN]
gi|221229367|ref|YP_002502783.1| hypothetical protein MLBr_00028 [Mycobacterium leprae Br4923]
gi|13092436|emb|CAC29536.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219932474|emb|CAR70121.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length = 201
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 73/186 (39%), Gaps = 17/186 (9%)
Query: 111 DKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMR 170
D A G LL+A L F R+VI I+ G G++LNRPS ++
Sbjct: 9 DYVAPAAQRVRAGTLLLANTDLLE-PTFRRSVIYIVEHNEGGTLGVVLNRPSETAV---- 63
Query: 171 STVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE 226
VL + +P +F GGP+ + L L + G D G +G+ +
Sbjct: 64 YNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRIGADPDGVAGLRHVAGRLVMVDLDA 123
Query: 227 TVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLG 286
A +V + R F G GW QL EI W V + PS + L
Sbjct: 124 EPDLIAPLV-------DGLRIFVGYSGWTIGQLKGEIERDDWIVLSALPSDV-LVGKRAD 175
Query: 287 LWEELL 292
LW ++L
Sbjct: 176 LWAQVL 181
>gi|194337168|ref|YP_002018962.1| hypothetical protein Ppha_2142 [Pelodictyon phaeoclathratiforme
BU-1]
gi|226701188|sp|B4SD86.1|Y2142_PELPB RecName: Full=UPF0301 protein Ppha_2142
gi|194309645|gb|ACF44345.1| protein of unknown function DUF179 [Pelodictyon phaeoclathratiforme
BU-1]
Length = 187
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 19/145 (13%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD--RPLFFGGPLEEGL 195
F+RTV+++ G ILNRP M V +A F + L GGP+E
Sbjct: 25 FKRTVLVVCEHNERGSLAFILNRP-------MEFKVCEAVSGFEEVEERLHMGGPVEVDT 77
Query: 196 --FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
FL S GD + S +++ G+++G + + ++ + P + RFF G G
Sbjct: 78 VHFLHSR---GDLIDGS---LEILPGIFWGGDKNE--LSYLLNTGVMMPSEIRFFLGYAG 129
Query: 254 WEKEQLNEEIRAGYWTVAACSPSVI 278
W QL E G W A S +I
Sbjct: 130 WSAGQLEAEFEEGAWYTAEASKDII 154
>gi|424745448|ref|ZP_18173711.1| hypothetical protein ACINWC141_0352 [Acinetobacter baumannii
WC-141]
gi|422942141|gb|EKU37202.1| hypothetical protein ACINWC141_0352 [Acinetobacter baumannii
WC-141]
Length = 184
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 66/157 (42%), Gaps = 14/157 (8%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
CL+ E D F TVI + + G GII+NRPS + IKE+ + + A +
Sbjct: 10 CLIAPPEMADD--FFANTVIYLARHDEEGAQGIIINRPSGIQIKELLNDLDIEADNVNPH 67
Query: 184 PLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ GGPL E G L + G S + V E + T + + A + VG
Sbjct: 68 AVLQGGPLRPEAGFVLHT----GQPTWHSSI--AVGENVCITTSKDILDA--IAHNEGVG 119
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
++ G W K QL +EI G W + +I
Sbjct: 120 R--YQIALGYASWSKNQLEDEITRGDWLICDADMDLI 154
>gi|13431996|sp|Q50191.1|Y028_MYCLE RecName: Full=UPF0301 protein ML0028
gi|1262369|emb|CAA94716.1| hypothetical protein [Mycobacterium leprae]
Length = 202
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 73/186 (39%), Gaps = 17/186 (9%)
Query: 111 DKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMR 170
D A G LL+A L F R+VI I+ G G++LNRPS ++
Sbjct: 10 DYVAPAAQRVRAGTLLLANTDLLE-PTFRRSVIYIVEHNEGGTLGVVLNRPSETAV---- 64
Query: 171 STVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE 226
VL + +P +F GGP+ + L L + G D G +G+ +
Sbjct: 65 YNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRIGADPDGVAGLRHVAGRLVMVDLDA 124
Query: 227 TVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLG 286
A +V + R F G GW QL EI W V + PS + L
Sbjct: 125 EPDLIAPLV-------DGLRIFVGYSGWTIGQLKGEIERDDWIVLSALPSDV-LVGKRAD 176
Query: 287 LWEELL 292
LW ++L
Sbjct: 177 LWAQVL 182
>gi|410694725|ref|YP_003625347.1| Putative transcriptional regulator [Thiomonas sp. 3As]
gi|294341150|emb|CAZ89551.1| Putative transcriptional regulator [Thiomonas sp. 3As]
Length = 190
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 22/149 (14%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAAGTFSDRPLFFGGPLEEGLF 196
F TV+ + G G+I+NRPS +++KE+ V LD AG ++ +P+ GGP+
Sbjct: 26 FAGTVVYVCEHSARGALGLIINRPSDITVKELFERVGLDHAGLYASQPVLQGGPV----- 80
Query: 197 LVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV-------GPEDFRFFD 249
+ + V + + Y + + G ++ + GP
Sbjct: 81 ---------QTERGFVLHETTDTAYASSLDIPGGLQMTTSKDVLEHMAAGDGPTRSLITL 131
Query: 250 GCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW QL EE+ W P V+
Sbjct: 132 GYSGWSAGQLEEELGQNGWLTVEADPIVL 160
>gi|85060001|ref|YP_455703.1| hypothetical protein SG2023 [Sodalis glossinidius str. 'morsitans']
gi|119391294|sp|Q2NRC7.1|Y2023_SODGM RecName: Full=UPF0301 protein SG2023
gi|84780521|dbj|BAE75298.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 187
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F+R+V+ I G GI++N+P +++ ++ D A D+P+F GG
Sbjct: 18 LFKRSVVYICEHNSDGAMGIVINKPVEQFTVENVLHKLKIMPADRDPAIRL-DKPVFAGG 76
Query: 190 PL--EEGLFLVSPKGGGDEVGKS-GVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFR 246
PL + G L +P+ G G S G+ Q M ET+G A + P+D
Sbjct: 77 PLADDRGFILHTPRDG---FGSSIGISPQTMITTSKDVLETLGTADQ--------PDDVL 125
Query: 247 FFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GWE+ +L E+ W ++
Sbjct: 126 VALGYSGWEQGKLERELMENAWLTTPADSEIL 157
>gi|404451727|ref|ZP_11016684.1| putative transcriptional regulator [Indibacter alkaliphilus LW1]
gi|403762583|gb|EJZ23638.1| putative transcriptional regulator [Indibacter alkaliphilus LW1]
Length = 189
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 20/181 (11%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P+ G LLI+ L + F R+V+L+ G G++LN+ S++ + E+ V +
Sbjct: 9 PKAGHLLISEPFLQDEN-FVRSVVLVCENNENGSFGLVLNKLSILKLNELIDNV-----S 62
Query: 180 FSDRPLFFGGPLEEG-LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
+ ++ GGP+E+ L + G+++ + + ++ + L++G G E+V++
Sbjct: 63 VVECNVYVGGPVEQNTLHFIY---FGEKLSEQSI--ELAKDLWWG-----GNFDEIVEQI 112
Query: 239 AVGP---EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLM 295
+G E RFF G GW QL+ E++ W V S S LW+ +L M
Sbjct: 113 NIGKLDKEKIRFFIGYSGWAIGQLDLELQENTWIVCDELISENIFTSSPEDLWKIILRNM 172
Query: 296 G 296
G
Sbjct: 173 G 173
>gi|383760052|ref|YP_005439038.1| hypothetical protein RGE_42030 [Rubrivivax gelatinosus IL144]
gi|381380722|dbj|BAL97539.1| hypothetical protein RGE_42030 [Rubrivivax gelatinosus IL144]
Length = 189
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 14/164 (8%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGPL--E 192
F V+ + G G+++N+P + ++ + V LD F+++P+FFGGP+ E
Sbjct: 22 FAGAVVYLCEHNERGALGLVINKPIDIKLRNLFERVELPLDR-DEFAEQPVFFGGPVQTE 80
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
G L G GD + V GL T + V A GP G
Sbjct: 81 RGFVLHEKTGDGDAYSST---MSVPGGLEMTTSKDVLEAMS----QGGGPRRVLVTLGYS 133
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GW+ QL +EIR W P +I E+ +++ L L+G
Sbjct: 134 GWDAGQLEDEIRRNGWLNVDADPKII-FETPIEQRYDQALSLLG 176
>gi|77361515|ref|YP_341090.1| hypothetical protein PSHAa2600 [Pseudoalteromonas haloplanktis
TAC125]
gi|119391320|sp|Q3IFA1.1|Y2600_PSEHT RecName: Full=UPF0301 protein PSHAa2600
gi|76876426|emb|CAI87648.1| conserved protein possibly involved in the control of
exopolysaccharide production [Pseudoalteromonas
haloplanktis TAC125]
Length = 185
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 16/164 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVL---DAAGTFSDRPLFFGGPL--E 192
F+R V I G G+++N+P +++ E+ + D + ++ GGP+ +
Sbjct: 20 FKRAVTYICEHNEDGAMGLVINQPINITVGELLDKIEIDNDKTQQAAQVSVYAGGPVKTD 79
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
G L SPK G + + + T + V + A PE F G
Sbjct: 80 RGFVLHSPKHG------YSASQALSSDIMITTSKDVLASL----TTAQAPEQFIITLGYS 129
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GWE+ QL +E+ W + P +I ++ WE+ + ++G
Sbjct: 130 GWEQGQLEQELLDNSWLIIKADPKII-FDTPVEKRWEKAVSMLG 172
>gi|338998485|ref|ZP_08637159.1| transcriptional regulator [Halomonas sp. TD01]
gi|338764802|gb|EGP19760.1| transcriptional regulator [Halomonas sp. TD01]
Length = 185
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 11/144 (7%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS---DRPLFFGGPLEEG 194
F ++I + + G G+I NRP +++ + L G S + P+++GGP+ +
Sbjct: 20 FAGSLIYLCDHDHNGCMGVIANRPLEITLDALFEQ-LSLGGDDSPHRNAPVYYGGPMHKD 78
Query: 195 LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGW 254
+ G E S QV +G+ T + A + GPEDF GC GW
Sbjct: 79 RGFILHIGDSQEWDSS---VQVEDGIALTTSMDILQAL----ADDTGPEDFLVCLGCAGW 131
Query: 255 EKEQLNEEIRAGYWTVAACSPSVI 278
+ QL +E++ W SV+
Sbjct: 132 DVGQLEDELKENAWLTVEGQGSVL 155
>gi|395773919|ref|ZP_10454434.1| hypothetical protein Saci8_29304 [Streptomyces acidiscabies 84-104]
Length = 190
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 14/173 (8%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + FER V+L+L + G G++LNRP+ + + ++ D AG
Sbjct: 9 GRLLVATPALADPN-FERAVVLLLDHDEKGSLGVVLNRPTPVGVGDILEGWADLAGEPGV 67
Query: 183 RPLFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+F GGP L+ L + V P G E G + +V + E A + A
Sbjct: 68 --VFQGGPVSLDSALGVAVIPGGASGERAPLG-WRRVHGAIGLVDLE----APPELLAEA 120
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+G R F G GW QL E+ G W V P + + LW E+L
Sbjct: 121 LG--SLRIFAGYAGWGPGQLENELGDGAWYVVESEPGDVSSPAPER-LWREVL 170
>gi|294634384|ref|ZP_06712921.1| alginate biosynthesis nucleoside diphosphate kinase regulator AlgH
[Edwardsiella tarda ATCC 23685]
gi|451966562|ref|ZP_21919815.1| hypothetical protein ET1_14_02310 [Edwardsiella tarda NBRC 105688]
gi|291092192|gb|EFE24753.1| alginate biosynthesis nucleoside diphosphate kinase regulator AlgH
[Edwardsiella tarda ATCC 23685]
gi|451314863|dbj|GAC65177.1| hypothetical protein ET1_14_02310 [Edwardsiella tarda NBRC 105688]
Length = 187
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 26/153 (16%)
Query: 138 FERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGGP 190
F+RTVI + G G+I+N+P +L+ ++ T DAA D+P+ GGP
Sbjct: 19 FKRTVIYVCEHNEDGAMGMIINKPLEQLTLSTLLEKLDIEPTPRDAAIRL-DKPVLAGGP 77
Query: 191 LEE--GLFLVSPK---GGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDF 245
L E G L SP G ++G + + L ET+G + PE+
Sbjct: 78 LAEDRGFVLHSPSDAFGSSADIGPGCMLTTSRDVL-----ETLGTDRQ--------PEEI 124
Query: 246 RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G C W K QL +E+ W ++
Sbjct: 125 LVTLGYCSWSKGQLEQELLDNAWLTVEADSQIL 157
>gi|270263055|ref|ZP_06191325.1| protein YqgE [Serratia odorifera 4Rx13]
gi|421785434|ref|ZP_16221860.1| hypothetical protein B194_4486 [Serratia plymuthica A30]
gi|270042743|gb|EFA15837.1| protein YqgE [Serratia odorifera 4Rx13]
gi|407752451|gb|EKF62608.1| hypothetical protein B194_4486 [Serratia plymuthica A30]
Length = 187
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 23/169 (13%)
Query: 138 FERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGGP 190
F+R+VI + G G+++N+P +++S ++ + A + DRP+F GGP
Sbjct: 19 FKRSVIYVCEHNEEGAMGLVINKPVEQFTVETVLSKLKIMPPARNPAISL-DRPVFAGGP 77
Query: 191 L--EEGLFLVSPKGGGDEVGKS-GVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRF 247
L + G L +P+ G G S + M ET+G + P+D
Sbjct: 78 LADDRGFILHTPRSG---FGSSIQISPDTMITTSKDVLETLGTPEQ--------PDDVLV 126
Query: 248 FDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G GWEK QL +E+ W ++ + W E L+G
Sbjct: 127 ALGYAGWEKGQLEQEVLENAWLTIEADTDIL-FHTPIASRWREAANLLG 174
>gi|403718014|ref|ZP_10943047.1| hypothetical protein KILIM_080_00010 [Kineosphaera limosa NBRC
100340]
gi|403208741|dbj|GAB97730.1| hypothetical protein KILIM_080_00010 [Kineosphaera limosa NBRC
100340]
Length = 188
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT + G IF R+V+L+L + G G++LN+P I VL A
Sbjct: 6 GRLLVATPRTGG-EIFRRSVVLLLHHDEAGAHGLVLNKP----IGAPVGRVLPAWQEHVS 60
Query: 183 RP--LFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
P LF GGP L+ L LV GG E + + + L FGT +
Sbjct: 61 EPAQLFQGGPVGLDTALGLVRVPGGSHEDHSAPLGIR----LLFGTVGVIDLDVPPEVVV 116
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270
R F G GW QL EI + W V
Sbjct: 117 PAV-AGMRVFAGYSGWGAGQLESEIESSGWYV 147
>gi|359434577|ref|ZP_09224840.1| UPF0301 protein PSHAa2600 [Pseudoalteromonas sp. BSi20652]
gi|357918786|dbj|GAA61089.1| UPF0301 protein PSHAa2600 [Pseudoalteromonas sp. BSi20652]
Length = 185
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 16/164 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVL---DAAGTFSDRPLFFGGPL--E 192
F+R V I G G+++N+P +++ E+ + D + +F GGP+ +
Sbjct: 20 FKRAVTYICEHNEDGAMGLVINQPINVTVGELLDKIEIDNDKTQNAAKVSVFAGGPVKTD 79
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
G L SP+ G +++ + T + V + A PE F G
Sbjct: 80 RGFVLHSPQSG------YSASQKLSSDIMITTSKDVLASL----TTAQAPEQFIITLGYS 129
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GWE+ QL +E+ W + P +I + WE+ + ++G
Sbjct: 130 GWEQGQLEQELLDNSWLIIEADPKII-FNTPVEKRWEKAVSMLG 172
>gi|332524148|ref|ZP_08400378.1| hypothetical protein RBXJA2T_00190 [Rubrivivax benzoatilyticus JA2]
gi|332107487|gb|EGJ08711.1| hypothetical protein RBXJA2T_00190 [Rubrivivax benzoatilyticus JA2]
Length = 189
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 9/144 (6%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGPLEEG 194
F +V+ + G G+++NRP + ++ + V LD F+++P+FFGGP++
Sbjct: 22 FAGSVVYLCEHNERGALGLVINRPIDIKLRNLFERVDLPLDRD-EFAEQPVFFGGPVQTE 80
Query: 195 LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGW 254
V + GD S V GL T + V A GP G GW
Sbjct: 81 RGFVLHEKAGDGSAYSSTM-SVPGGLEMTTSKDVLEAMS----QGGGPRRVLVTLGYSGW 135
Query: 255 EKEQLNEEIRAGYWTVAACSPSVI 278
E QL +EIR W P +I
Sbjct: 136 EAGQLEDEIRRNGWLNVDADPRII 159
>gi|53802375|ref|YP_112944.1| hypothetical protein MCA0413 [Methylococcus capsulatus str. Bath]
gi|81682931|sp|Q60BQ2.1|Y413_METCA RecName: Full=UPF0301 protein MCA0413 1
gi|53756136|gb|AAU90427.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
Length = 182
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 78/181 (43%), Gaps = 21/181 (11%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
H G L+A K+ +IF +VI ++S G G+I+NR ++ +L+A
Sbjct: 10 HADTSGQFLVAHPKMP-ANIFAHSVIYVVSHNADGAMGLIVNR---LAGAGPLGKLLEAF 65
Query: 178 GTFS----DRPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCA 231
G S + L+ GGP + +G L S D G S + +GL T V
Sbjct: 66 GLASKAQREIKLYLGGPVGIGQGFVLHSD----DYAGAS--TRALKKGLSLSTGLDV--- 116
Query: 232 AEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEEL 291
E + R GP R G GW QL+ EI G W +A S+I E +WEE
Sbjct: 117 LEAIARGR-GPRQVRMLFGYAGWSPGQLDGEIARGDWLLAPADTSLIFSEEPD-KVWEEA 174
Query: 292 L 292
L
Sbjct: 175 L 175
>gi|379058059|ref|ZP_09848585.1| hypothetical protein SproM1_08288 [Serinicoccus profundi MCCC
1A05965]
Length = 192
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 75/176 (42%), Gaps = 22/176 (12%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L G F +V+L+L + G G++LN+P + VL F
Sbjct: 13 GQLLVAT-PLTG-DPFSGSVVLVLHHDEEGAHGLVLNQP----LDAGVDAVLPEWQPFVT 66
Query: 183 RP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
P LF GGP+ + + LVS G G + + Q++ G +G
Sbjct: 67 DPGVLFRGGPVGRDTAMGLVSVPG--HRPGDAPLGTQLLFG-------GIGLVDLDAPAP 117
Query: 239 AVGPE--DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
V PE FR F G GW QL+ EIR G W V P T LW E+L
Sbjct: 118 LVVPELGAFRIFVGYSGWSAGQLDSEIRHGAWAVVPREPRDP-FHEDTTDLWREVL 172
>gi|302865532|ref|YP_003834169.1| hypothetical protein Micau_1030 [Micromonospora aurantiaca ATCC
27029]
gi|315502080|ref|YP_004080967.1| hypothetical protein ML5_1277 [Micromonospora sp. L5]
gi|302568391|gb|ADL44593.1| protein of unknown function DUF179 [Micromonospora aurantiaca ATCC
27029]
gi|315408699|gb|ADU06816.1| protein of unknown function DUF179 [Micromonospora sp. L5]
Length = 196
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 38/172 (22%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
E G LL+AT L + F+RTV+L+++ EP G G++LNR + +S+ D G
Sbjct: 14 ESMTGRLLVATPGLKDPN-FDRTVVLLVAHEPGGALGVVLNRATEVSVA-------DVLG 65
Query: 179 TFSDRP-----LFFGGPLEEGLFL--------VSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
+SD LF GGP++ + V P G F +V G
Sbjct: 66 DWSDLARDPAVLFEGGPVQPDSAICLARMRHPVRPVKG---------FHRVS-----GAV 111
Query: 226 ETVGCAAEMVK-RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPS 276
T+ + + K R A+G R F G GW Q+ EI G W V P
Sbjct: 112 GTIDLSVDPEKLREAIG--GIRVFAGYSGWGAGQVEREIEEGSWFVFDALPG 161
>gi|149919539|ref|ZP_01908019.1| hypothetical protein PPSIR1_10825 [Plesiocystis pacifica SIR-1]
gi|149819664|gb|EDM79091.1| hypothetical protein PPSIR1_10825 [Plesiocystis pacifica SIR-1]
Length = 210
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAAGTFSDRPLFFGGPLE--EG 194
F+R+V+L+L + G G+++NR S+ E+ + L+ G D + GGP+E G
Sbjct: 32 FKRSVVLMLEHDERGALGLVINRTMNTSLSEVAEALDLEWCGD-PDAQVRIGGPVEPVRG 90
Query: 195 LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK-ETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
FL +G D S +++GL+ T E VG A + R +F F G G
Sbjct: 91 WFL-HDQGAWDPDASS-----LVDGLWVTTSLEGVGAAGSV--RFGSEESNFLFLLGYAG 142
Query: 254 WEKEQLNEEIRAGYWTV 270
W QL EI AG W +
Sbjct: 143 WSGGQLEGEIAAGSWVL 159
>gi|237654351|ref|YP_002890665.1| hypothetical protein Tmz1t_3695 [Thauera sp. MZ1T]
gi|237625598|gb|ACR02288.1| protein of unknown function DUF179 [Thauera sp. MZ1T]
Length = 191
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 13/157 (8%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRP---SLMSIKEMRSTVLDAAGTFS 181
LIA + H F RT+ I G GII+NRP +L S+ E L+A G F+
Sbjct: 15 FLIAMPNMVDPH-FARTLTYIAEHNEQGALGIIVNRPIDMTLASLFERIEVPLEAEG-FA 72
Query: 182 DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+P++FGGP++ V + GD V +++ + +G E
Sbjct: 73 AQPVYFGGPVQTDRGFVLHRPLGDWHSTLKVTDEIGLTSSRDVLQAIGAGGE-------- 124
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
P+D G GW QL +E+ W ++
Sbjct: 125 PKDVIVTLGYAGWAAGQLEQELLDNAWLTVPADLEIV 161
>gi|24216409|ref|NP_713890.1| transcriptional regulator [Leptospira interrogans serovar Lai str.
56601]
gi|386075409|ref|YP_005989729.1| putative transcriptional regulator [Leptospira interrogans serovar
Lai str. IPAV]
gi|24197699|gb|AAN50908.1| putative transcriptional regulator [Leptospira interrogans serovar
Lai str. 56601]
gi|353459201|gb|AER03746.1| putative transcriptional regulator [Leptospira interrogans serovar
Lai str. IPAV]
Length = 182
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ E G +LI+ + + F RTVIL++ + G G++LN+ SI E+ + D
Sbjct: 1 MEENYSGKILISNSSI-VMDYFNRTVILMVEHDNQGAFGLVLNKRQEASIGEVIQGIPDH 59
Query: 177 AGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
+ ++ GGP++ +S +++ + G+ +++ GLY + E++K
Sbjct: 60 VS--RNSLIYSGGPVDPT--FISVLHEDNKISQPGI--EIIPGLYLA--RSFDTLLELLK 111
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
++ F F G GW QL E+ W + S + L W+E L
Sbjct: 112 SSS----KFHVFQGYSGWGAGQLETEMNRKSWVIHEASKDFV-LNQDPETTWQEAL 162
>gi|443289024|ref|ZP_21028118.1| conserved hypothetical protein [Micromonospora lupini str. Lupac
08]
gi|385887702|emb|CCH16192.1| conserved hypothetical protein [Micromonospora lupini str. Lupac
08]
Length = 196
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
E G LL+AT L + F+RTV+L+++ EP G G++LNR + + + E VL
Sbjct: 14 ESMTGRLLVATPALKDPN-FDRTVVLLVAHEPGGALGVVLNRATEVPVAE----VLGDWS 68
Query: 179 TFSDRP--LFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
+ P LF GGP++ + L + + + F QV G T+ + +
Sbjct: 69 DLARHPAVLFEGGPVQPDSAICLARMR---QPMRRFKGFHQVS-----GAVGTIDLSVDP 120
Query: 235 VK-RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPS 276
K R +VG R F G GW QL +EI G W + P
Sbjct: 121 EKLRESVG--GIRVFAGYSGWGSGQLEQEIADGSWFLLDALPG 161
>gi|410630967|ref|ZP_11341651.1| hypothetical protein GARC_1546 [Glaciecola arctica BSs20135]
gi|410149476|dbj|GAC18518.1| hypothetical protein GARC_1546 [Glaciecola arctica BSs20135]
Length = 185
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 16/162 (9%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
+ LLIA+ +D + F RTV I G G+I+N+P M +KE+ V D A
Sbjct: 5 QNYLLIASPSMDDPY-FARTVTYICEHNEHGAMGLIINQPVGMKLKELVEQVDDKAEVID 63
Query: 182 DRP---LFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
++ + GGP+ + G L + + G + E + +K+ +
Sbjct: 64 EKAEDIILAGGPVSQDRGFILHTTQPGW-----ASSLTMTPEVMVTTSKDIISSLG---- 114
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
N P+ G GW QL EEI+ W + ++
Sbjct: 115 -NKDAPDKSLIMLGYAGWTAGQLEEEIQTSSWLMVEADTEIL 155
>gi|332288758|ref|YP_004419610.1| putative transcriptional regulator [Gallibacterium anatis UMN179]
gi|330431654|gb|AEC16713.1| putative transcriptional regulator [Gallibacterium anatis UMN179]
Length = 186
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 70/162 (43%), Gaps = 15/162 (9%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRST---VLDAAG 178
+ L+A LD F+R+V+ I G G+++N+P+ +S+ EM + ++
Sbjct: 4 QNQFLVAMPDLDD-PFFQRSVVYICEDNEQGSMGLVINQPTDLSLAEMMAKMNHLMPTEP 62
Query: 179 TFSDRPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
+ ++ +F GGP +E+G L + + + + L T + +
Sbjct: 63 KYPEKMIFAGGPVNIEQGFVLHTVTDKNYRYSFA-----INDDLMLTTSSDILLSL---- 113
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ P+++ GC W+ EQL EEI+ W ++
Sbjct: 114 NSDAAPKEYFIALGCALWQPEQLAEEIKNNDWLTVPADYDIL 155
>gi|262370093|ref|ZP_06063420.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262315132|gb|EEY96172.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 184
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 14/157 (8%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
CL+ + D V F TVI + + G GII+NRPS +S+KE+ + + A
Sbjct: 10 CLIAPPDMADEV--FAHTVIYLARHDEEGAQGIIINRPSGLSVKELLNDLEIEADHVRPH 67
Query: 184 PLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ GGPL E G L + G S + V E + T + + A + VG
Sbjct: 68 DVLQGGPLRPEAGFVLHT----GQPTWHSSI--AVGENICITTSKDILDA--IAHNEGVG 119
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
++ G W K QL +E+ G W V +I
Sbjct: 120 R--YQIALGYTSWTKNQLEDELSRGDWLVCDADMDLI 154
>gi|197284240|ref|YP_002150112.1| hypothetical protein PMI0339 [Proteus mirabilis HI4320]
gi|227357857|ref|ZP_03842205.1| transcriptional regulator [Proteus mirabilis ATCC 29906]
gi|425067136|ref|ZP_18470252.1| UPF0301 protein [Proteus mirabilis WGLW6]
gi|425073351|ref|ZP_18476457.1| UPF0301 protein [Proteus mirabilis WGLW4]
gi|226703809|sp|B4EUS1.1|Y339_PROMH RecName: Full=UPF0301 protein PMI0339
gi|194681727|emb|CAR40881.1| conserved hypothetical protein [Proteus mirabilis HI4320]
gi|227161967|gb|EEI46985.1| transcriptional regulator [Proteus mirabilis ATCC 29906]
gi|404595329|gb|EKA95874.1| UPF0301 protein [Proteus mirabilis WGLW4]
gi|404601431|gb|EKB01840.1| UPF0301 protein [Proteus mirabilis WGLW6]
Length = 187
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 20/151 (13%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F+R+V+ + G G+++N+P S++ E+ S D+A + +P+ GG
Sbjct: 18 LFQRSVVYVCEHNENGAMGLVINKPIEDISIESVLEQLEIFSADRDSAISL-QKPVMSGG 76
Query: 190 PL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRF 247
P+ E G L +P G K + + M ET+G A + PE
Sbjct: 77 PVAEEHGFILHTPVSGFSSSIK--ISDSTMITTSKDVLETLGTARQ--------PEKTLV 126
Query: 248 FDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G WEK QL EI W +P +I
Sbjct: 127 SLGYSSWEKGQLEREILENSWLTVEATPQII 157
>gi|448243883|ref|YP_007407936.1| hypothetical protein SMWW4_v1c41300 [Serratia marcescens WW4]
gi|445214247|gb|AGE19917.1| hypothetical protein SMWW4_v1c41300 [Serratia marcescens WW4]
gi|453063321|gb|EMF04301.1| hypothetical protein F518_17854 [Serratia marcescens VGH107]
Length = 187
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 29/172 (16%)
Query: 138 FERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGGP 190
F+R+VI I G G+++N+P +++S ++ D A + D+P+F GGP
Sbjct: 19 FKRSVIYICEHNEEGAMGLVINKPVEQFTVATVLSKLKIMPPARDPAISL-DKPVFAGGP 77
Query: 191 L--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK----ETVGCAAEMVKRNAVGPED 244
L + G L +P+ G G Q+ T ET+G + P+D
Sbjct: 78 LADDRGFILHTPRHG------FGASIQISPNTMITTSKDVLETLGTPEQ--------PDD 123
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G GWEK QL +E+ W + ++ + W E L+G
Sbjct: 124 VLVALGYAGWEKGQLEQEVLENAWLTIEANTDIL-FRTPIASRWREAGNLLG 174
>gi|410866566|ref|YP_006981177.1| hypothetical protein PACID_20280 [Propionibacterium acidipropionici
ATCC 4875]
gi|410823207|gb|AFV89822.1| hypothetical protein PACID_20280 [Propionibacterium acidipropionici
ATCC 4875]
Length = 188
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 67/168 (39%), Gaps = 42/168 (25%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P G LL+AT + IF R+VI +L + G G++LN PS +++ VL A
Sbjct: 7 PRAGELLVATSAVTA-GIFARSVIYLLDADSQGTLGVVLNTPSTLALD----GVLPAWVP 61
Query: 180 FSDRP--LFFGGPLEEG-------LFLVS--PKGGGDEVGKSGVFE-----QVMEGLYFG 223
+ P LF GGP+ L VS P G G G+ +++EG Y
Sbjct: 62 LTTPPQRLFQGGPVSPNGAVCLARLQHVSEEPPGWRRVSGPVGLLHLDTPVELVEGAY-- 119
Query: 224 TKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
D R F G GWE QL EI G W A
Sbjct: 120 -------------------SDLRIFAGYSGWEPGQLEAEIIRGDWVRA 148
>gi|346224050|ref|ZP_08845192.1| putative transcriptional regulator [Anaerophaga thermohalophila DSM
12881]
Length = 197
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 76/186 (40%), Gaps = 18/186 (9%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P G +LIA L G + F R+++L+ G G +LN+ + + E+ +L G
Sbjct: 17 KPAAGRVLIAEPFLQGPY-FGRSIVLLTEHNDEGTVGFVLNKSTELYPDEVVEDILSFEG 75
Query: 179 TFSDRPLFFGGPLEEGL--FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
LF GGP+ FL + GD V S ++ +Y+G M+
Sbjct: 76 E-----LFVGGPVSSNTMSFLHTL---GDRVPGS---VKITSTVYWGGD--FNHLKRMIN 122
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
+ +FF G GW QL EI W V+ +I + +WE + MG
Sbjct: 123 SGEASSQSVKFFAGYSGWAPGQLEGEIAENSWVVSTLRDELI-MTRDVDNIWEIAMHEMG 181
Query: 297 R-RKVW 301
K W
Sbjct: 182 DIYKTW 187
>gi|332535115|ref|ZP_08410925.1| UPF0301 protein YqgE [Pseudoalteromonas haloplanktis ANT/505]
gi|332035433|gb|EGI71931.1| UPF0301 protein YqgE [Pseudoalteromonas haloplanktis ANT/505]
Length = 185
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 16/164 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVL---DAAGTFSDRPLFFGGPL--E 192
F+R V I G G+++N+P +++ E+ + D + +F GGP+ +
Sbjct: 20 FKRAVTYICEHNEDGAMGLVINQPIDVTVGELLDKIEIDNDKTQNAAKVSVFAGGPVKTD 79
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
G L SP+ G +++ + T + V A PE F G
Sbjct: 80 RGFVLHSPQSG------YSASQKLSSDIMITTSKDVLANL----TTAQAPEQFIITLGYS 129
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GWE+ QL +E+ W + P +I ++ WE+ + ++G
Sbjct: 130 GWEQGQLEQELLDNSWLIIEADPKII-FDTPVEKRWEKAVSMLG 172
>gi|295675688|ref|YP_003604212.1| hypothetical protein BC1002_0600 [Burkholderia sp. CCGE1002]
gi|295435531|gb|ADG14701.1| protein of unknown function DUF179 [Burkholderia sp. CCGE1002]
Length = 192
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 59/145 (40%), Gaps = 12/145 (8%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPL--EE 193
F TV+ + G G+++NRP+ + ++ + R + P++FGGP+ E
Sbjct: 26 FSGTVVYLCDHSERGALGLVINRPTDIDLEALFNRIDLKLEIEPLLHVPVYFGGPVQTER 85
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
G L PKGG V GL T + V A + GPE F G G
Sbjct: 86 GFVLHDPKGGSAYTSSM----SVPGGLEMTTSKDVLEAVA----SGNGPERFLLTLGHAG 137
Query: 254 WEKEQLNEEIRAGYWTVAACSPSVI 278
W QL +EI W P ++
Sbjct: 138 WGAGQLEDEISKNGWLTVEADPKIV 162
>gi|383824207|ref|ZP_09979391.1| hypothetical protein MXEN_05255 [Mycobacterium xenopi RIVM700367]
gi|383337480|gb|EID15856.1| hypothetical protein MXEN_05255 [Mycobacterium xenopi RIVM700367]
Length = 201
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 19/187 (10%)
Query: 111 DKWAHTIHEPEKGCLLIA-TEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM 169
D A G LL+A T+ L+ F R+VI ++ G G++LNRPS ++
Sbjct: 9 DYVAPAAQRVRSGTLLLANTDLLE--PTFRRSVIYVVEHNDGGTLGVVLNRPSDTAVY-- 64
Query: 170 RSTVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
VL + +P +F GGP+ + L L + + G D G G+ +
Sbjct: 65 --NVLPQWAKLAAKPKTMFIGGPVKRDAALCLGALRVGADPQGVPGLRHVTGRIVMVDLD 122
Query: 226 ETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTL 285
A +V E R F G GW QL EI W V + PS + L +
Sbjct: 123 ADPDVIAPLV-------EGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDV-LAGPRV 174
Query: 286 GLWEELL 292
LW L
Sbjct: 175 DLWGRAL 181
>gi|400534802|ref|ZP_10798339.1| hypothetical protein MCOL_V210425 [Mycobacterium colombiense CECT
3035]
gi|400331160|gb|EJO88656.1| hypothetical protein MCOL_V210425 [Mycobacterium colombiense CECT
3035]
Length = 201
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 76/195 (38%), Gaps = 21/195 (10%)
Query: 104 PPQNSLGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSL 163
PP D A G LL+A L F R+VI I+ G G++LNR S
Sbjct: 2 PPPEDPEDYVAPAAQRVRAGTLLLANTDLLE-PTFRRSVIYIVEHNDGGTLGVVLNRASE 60
Query: 164 MSIKEMRSTVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEG 219
++ VL S +P +F GGP+ + L L + + G D G G+
Sbjct: 61 TAVY----NVLPQWTKLSAKPKTMFIGGPVKRDAALCLATLRVGADPQGVPGLRHVDGRV 116
Query: 220 LYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPS--V 277
+ A +V E R F G GW QL EI W V + PS +
Sbjct: 117 VMVDLDADPDVIAPLV-------EGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVL 169
Query: 278 IGLESGTLGLWEELL 292
+G S LW ++L
Sbjct: 170 VGPRS---DLWGQVL 181
>gi|386829465|ref|ZP_10116572.1| putative transcriptional regulator [Beggiatoa alba B18LD]
gi|386430349|gb|EIJ44177.1| putative transcriptional regulator [Beggiatoa alba B18LD]
Length = 187
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 61/148 (41%), Gaps = 20/148 (13%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMS-----IKEMRSTVLDAAGTFSDRPLFFGGPL- 191
F +TV I + G GII+NRP L ++ M TV D + F P+F GGP+
Sbjct: 23 FYQTVTYICNHTADGAMGIIINRPILDVDLGDVLRHMTITVTDHSSVF--LPVFEGGPVQ 80
Query: 192 -EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDG 250
E G L SP G D + G G + + K + GP+ G
Sbjct: 81 RERGFVLHSPVGSWDSMLTVG---------ELGITTSRDILTAIAKGD--GPKQVLIALG 129
Query: 251 CCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GW QL +E+ + W + ++I
Sbjct: 130 YAGWAAGQLEKELLSNAWLIIPADNNII 157
>gi|115374877|ref|ZP_01462150.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|310820102|ref|YP_003952460.1| hypothetical protein STAUR_2841 [Stigmatella aurantiaca DW4/3-1]
gi|115368095|gb|EAU67057.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|309393174|gb|ADO70633.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 198
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 79/176 (44%), Gaps = 19/176 (10%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM-RSTVLDAAGTFSDR 183
LL+A +L G F R+V+L+L G G+++NR + +++ E+ R + A + +
Sbjct: 25 LLLAMPQL-GDPNFHRSVVLMLEHGEKGSMGLVINRGAPLTLGELARGQSMKIASDRTQQ 83
Query: 184 PLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFG-TKETVGCAAEMVKRNAV 240
P+F GGP+E G L + V + V V+ GL+ T + +G E
Sbjct: 84 PVFVGGPVESHRGFILHDE----ETVSEKHV---VLPGLFLSVTLDALGLLLENPSPRV- 135
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
RF G GW QL E+ AG W A + LE LW E L MG
Sbjct: 136 -----RFCLGYAGWGPGQLEREMAAGSWLFAEAVVHSV-LEGEPSRLWGETLRGMG 185
>gi|404260671|ref|ZP_10963951.1| hypothetical protein GONAM_53_00500 [Gordonia namibiensis NBRC
108229]
gi|403400858|dbj|GAC02361.1| hypothetical protein GONAM_53_00500 [Gordonia namibiensis NBRC
108229]
Length = 225
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 79/189 (41%), Gaps = 15/189 (7%)
Query: 114 AHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV 173
A H G LIA+ L F RTVI ++ G G+ILNR S ++ +
Sbjct: 36 ADPTHRVRPGTALIASTDL-IEPTFARTVIYVIEHNEAGSLGVILNRMSQTAVHNLLPQW 94
Query: 174 LDAAGTFSDRPLFFGGPLEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAA 232
D A S R L+ GGP+++ L + G +V V G V A
Sbjct: 95 TDIAA--SPRALYVGGPVKQDAALCLGVMKHGFDVDDHPALRPV-----DGRVVLVDLDA 147
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+ + V E R F G GW QL++E+ W +A+ P + L + +W ++L
Sbjct: 148 DPESLSEVL-EGVRIFAGYSGWGIGQLDDELDQDSWMLASALPRDL-LAPPGVDVWFDIL 205
Query: 293 WLMGRRKVW 301
RR+ W
Sbjct: 206 ----RRQPW 210
>gi|397666259|ref|YP_006507796.1| hypothetical protein LPV_0693 [Legionella pneumophila subsp.
pneumophila]
gi|395129670|emb|CCD07903.1| conserved protein of unknown function [Legionella pneumophila
subsp. pneumophila]
Length = 187
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 25/155 (16%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIK------EMRSTVLDAAG 178
LLIA L + FER+V+ + G G+I+NRP + E+ ++ G
Sbjct: 11 LLIAMPSLKDPN-FERSVVYLCEHNEQGSVGLIINRPLQFPLSIVFEQLEIEPIRVEKNG 69
Query: 179 TFSDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
PL FGGP++ E F++ + GG +S +F Q + TV + ++++
Sbjct: 70 L----PLLFGGPVQPERGFVIHKQMGG---WRSSLFLQ--------DEVTVTTSNDIIRA 114
Query: 238 NAV--GPEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270
A GP+D G W ++QL EI + W V
Sbjct: 115 IAYDEGPKDVLITLGYAAWTEQQLEREIMSNTWLV 149
>gi|317509431|ref|ZP_07967049.1| hypothetical protein HMPREF9336_03421 [Segniliparus rugosus ATCC
BAA-974]
gi|316252260|gb|EFV11712.1| hypothetical protein HMPREF9336_03421 [Segniliparus rugosus ATCC
BAA-974]
Length = 200
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 16/188 (8%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
I G LL+A+ +L G +F+RTV+ IL + G G+++NRP+ + + + + D
Sbjct: 9 IESVRAGSLLLASTELRG-EVFQRTVVYILEHDDRGTFGLVVNRPTKIPVSSVAAEWED- 66
Query: 177 AGTFSDRPLFF-GGPL-EEGLF-LVSPKGGGDEVGKSGVFEQVMEGLYFGTKE---TVGC 230
+ P+ + GGP+ ++GL L P+ ++V S + E L F V
Sbjct: 67 --LIAAPPVVYNGGPVRKDGLLCLGLPR---EDVANSEA--ENTESLGFSVVAPGVAVVN 119
Query: 231 AAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEE 290
+ A E R F G GW QL EI G W +A P + S + LW +
Sbjct: 120 LEADARLAAAALERVRIFAGYSGWAGGQLANEISRGSWYIAQGLPKDV-FMSPDVDLWGQ 178
Query: 291 LLWLMGRR 298
++ G R
Sbjct: 179 VVRRHGAR 186
>gi|284029743|ref|YP_003379674.1| hypothetical protein Kfla_1780 [Kribbella flavida DSM 17836]
gi|283809036|gb|ADB30875.1| protein of unknown function DUF179 [Kribbella flavida DSM 17836]
Length = 185
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 76/183 (41%), Gaps = 38/183 (20%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMR---STVLDAAGT 179
G LL+AT LD F R+VIL+L + G G+++NR + + + + ST ++ G
Sbjct: 8 GSLLVATPLLDEPP-FRRSVILLLDHDDDGALGVVVNRAADLEVDRVLPDWSTTVNEPGV 66
Query: 180 FSDRPLFFGGPL--------EEGLFLVSPKGGGDEVGKSGVFE-QVMEGLYFGTKETVGC 230
LF GGP+ E + P G + G+ G+ + V L G
Sbjct: 67 -----LFMGGPVGTDSALAVAEVIESADPPGWRECFGRIGLIDLDVPPALLEGA------ 115
Query: 231 AAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP-SVIGLESGTLGLWE 289
++R R F G GW QL EI G W V P V GL GLW
Sbjct: 116 ----IQR-------MRIFAGYAGWSGGQLEGEITEGAWYVVPSEPDDVFGLRPE--GLWR 162
Query: 290 ELL 292
+L
Sbjct: 163 RVL 165
>gi|386386089|ref|ZP_10071284.1| hypothetical protein STSU_22969 [Streptomyces tsukubaensis
NRRL18488]
gi|385666452|gb|EIF90000.1| hypothetical protein STSU_22969 [Streptomyces tsukubaensis
NRRL18488]
Length = 186
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 65/155 (41%), Gaps = 15/155 (9%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + ++ D AG
Sbjct: 9 GRLLVATPALADPN-FDRAVVLLLDHDEEGSLGVVLNRPTPVGVGDILRPWEDLAGEPGV 67
Query: 183 RPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
+F GGP L+ L + G +G V+ + E VG A
Sbjct: 68 --VFQGGPVSLDSALGIAVIPGEEGPLGWRRVYGAIGLVDLEAPPELVGAAL-------- 117
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
R F G GW QL E+ G W V P
Sbjct: 118 --GSLRIFAGYAGWGPGQLETELEEGAWYVVESEP 150
>gi|418695157|ref|ZP_13256181.1| hypothetical protein LEP1GSC081_4147 [Leptospira kirschneri str.
H1]
gi|421108911|ref|ZP_15569441.1| hypothetical protein LEP1GSC082_1334 [Leptospira kirschneri str.
H2]
gi|409957064|gb|EKO15981.1| hypothetical protein LEP1GSC081_4147 [Leptospira kirschneri str.
H1]
gi|410006006|gb|EKO59787.1| hypothetical protein LEP1GSC082_1334 [Leptospira kirschneri str.
H2]
Length = 182
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G +LI+ + + F RTVIL++ + G G++LN+ SI E+ + D +
Sbjct: 7 GKILISNSSI-VMDYFNRTVILMVEHDHQGAFGLVLNKRQEASIGEVIQDIPDHVS--RN 63
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
++ GGP++ +S +++ + G+ +++ GLY + E++K ++
Sbjct: 64 LLIYSGGPVDPT--FISVLHEDNKISQPGI--EIIPGLYLA--RSFDTLLELLKSSS--- 114
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
F F G GW QL E+ W + S + L W+E L
Sbjct: 115 -KFHVFQGYSGWGAGQLETEMNRKSWVIHEASKDFV-LNQDPETTWQEAL 162
>gi|386741399|ref|YP_006214579.1| hypothetical protein Cp31_2093 [Corynebacterium pseudotuberculosis
31]
gi|384478093|gb|AFH91889.1| Hypothetical protein Cp31_2093 [Corynebacterium pseudotuberculosis
31]
Length = 198
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
++P G LLIA ++ +F R+VIL+L G+ L S +++ V+
Sbjct: 13 NQPAPGMLLIAAPSMED-PVFARSVILLLEHNEATTFGVNLASRSDVAV----FNVMPEW 67
Query: 178 GTFSDRP--LFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
+P L+ GGPL ++G+ + G ++ F ++ L T E
Sbjct: 68 APLVSKPQALYIGGPLNQQGVIGIGVSVPGVDIVSHPHFNRLANRLVHVDLRT---QPED 124
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
V + G R F G WE QLNEEI G W VA S + +G + +W +++
Sbjct: 125 VAADLSG---LRLFAGYAEWEPGQLNEEIEKGEWYVAPALSSDV-TAAGNVDVWGDVM 178
>gi|440232356|ref|YP_007346149.1| putative transcriptional regulator [Serratia marcescens FGI94]
gi|440054061|gb|AGB83964.1| putative transcriptional regulator [Serratia marcescens FGI94]
Length = 187
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 20/150 (13%)
Query: 138 FERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGGP 190
F+R+VI I G G+++N+P S++ ++ D A + D+P++ GGP
Sbjct: 19 FKRSVIYICEHNEEGAMGLVINKPVEQFTVESVLEKLKIAPADRDPAISL-DKPVYAGGP 77
Query: 191 L--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFF 248
L + G L +P+ G D + + M ET+G + P++
Sbjct: 78 LADDRGFILHTPQPGFD--ASIQISPETMITTSRDVLETLGTPEQ--------PQEVLVA 127
Query: 249 DGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GWEK QL +E+ W A ++
Sbjct: 128 LGYAGWEKGQLEQEVLENAWLTAEADSEIL 157
>gi|383822716|ref|ZP_09977933.1| hypothetical protein MPHLEI_25276 [Mycobacterium phlei RIVM601174]
gi|383330803|gb|EID09323.1| hypothetical protein MPHLEI_25276 [Mycobacterium phlei RIVM601174]
Length = 201
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 74/176 (42%), Gaps = 21/176 (11%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+A L F R+VI I+ G G++LNRPS ++ V
Sbjct: 21 GTLLLANTDLLE-PTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYN----VFPQWAKLVA 75
Query: 183 RP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
+P +F GGP+ + L L + + G D G G+ G V A+ +
Sbjct: 76 KPKTMFIGGPVKRDAALCLATLRAGMDATGVPGLRH------VQGRVVMVDLDAD---PD 126
Query: 239 AVGP--EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
V P E R F G GW QL+ EI W V + PS + +E + LW +L
Sbjct: 127 TVAPVLEGARIFAGYSGWTIGQLDGEIERDDWIVLSALPSDVLVEP-RVDLWGRVL 181
>gi|383311998|ref|YP_005364799.1| hypothetical protein MCE_00685 [Candidatus Rickettsia amblyommii
str. GAT-30V]
gi|378930658|gb|AFC69167.1| hypothetical protein MCE_00685 [Candidatus Rickettsia amblyommii
str. GAT-30V]
Length = 189
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 72/175 (41%), Gaps = 21/175 (12%)
Query: 109 LGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR-PSLMSIK 167
+GDK H + G L+AT + I+ +++I +LS G G+I NR + + +K
Sbjct: 1 MGDKIFHNL----SGKTLVATPHVITKGIYHKSLIYMLSHTEEGAIGLIFNRLVNHIDLK 56
Query: 168 EMRSTVLDAAGTFSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
D T P++ GG +E +G FL S + + L F
Sbjct: 57 SFFKIKNDEITTPVMVPIYLGGLVEHEKGFFLHSSDYNKNLL------------LDFHND 104
Query: 226 ETVGCAAEMVKRNAVG--PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
V E+ + A G P++ F G W+ QL EE+ W V C+ I
Sbjct: 105 LAVSSNLEISEDIAFGKGPKNSLFIVGYTAWKPGQLEEELEKNLWLVMDCNKEFI 159
>gi|108802351|ref|YP_642548.1| hypothetical protein Mmcs_5392 [Mycobacterium sp. MCS]
gi|119871504|ref|YP_941456.1| hypothetical protein Mkms_5481 [Mycobacterium sp. KMS]
gi|126438331|ref|YP_001074022.1| hypothetical protein Mjls_5768 [Mycobacterium sp. JLS]
gi|108772770|gb|ABG11492.1| protein of unknown function DUF179 [Mycobacterium sp. MCS]
gi|119697593|gb|ABL94666.1| protein of unknown function DUF179 [Mycobacterium sp. KMS]
gi|126238131|gb|ABO01532.1| protein of unknown function DUF179 [Mycobacterium sp. JLS]
Length = 204
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+A L F R+VI I+ G G++LNRPS ++ VL +
Sbjct: 24 GTLLLANTDLLE-PTFRRSVIYIVEHNDGGTLGVVLNRPSETAVY----NVLPQWAKLAA 78
Query: 183 RP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVF----EQVMEGLYFGTKETVGCAAEM 234
+P +F GGP+ + L L + + G + G G+ VM L E + A E
Sbjct: 79 KPKTMFIGGPVKRDAALCLATLRAGVEAAGVPGLRHVQGRMVMVDLD-ADPEPLAPALEG 137
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
V R F G GW QL EI W V + PS + +E + LW +L
Sbjct: 138 V----------RIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVLIEP-RVDLWARVL 184
>gi|52840823|ref|YP_094622.1| transcriptional regulator [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54296605|ref|YP_122974.1| hypothetical protein lpp0636 [Legionella pneumophila str. Paris]
gi|148360767|ref|YP_001251974.1| transcriptional regulator [Legionella pneumophila str. Corby]
gi|378776524|ref|YP_005184961.1| transcriptional regulator [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|397663151|ref|YP_006504689.1| hypothetical protein LPO_0657 [Legionella pneumophila subsp.
pneumophila]
gi|81371088|sp|Q5X7G9.1|Y636_LEGPA RecName: Full=UPF0301 protein lpp0636
gi|81378069|sp|Q5ZXZ4.1|Y586_LEGPH RecName: Full=UPF0301 protein lpg0586
gi|166228438|sp|A5IGX8.1|Y2717_LEGPC RecName: Full=UPF0301 protein LPC_2717
gi|52627934|gb|AAU26675.1| transcriptional regulator [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53750390|emb|CAH11784.1| hypothetical protein lpp0636 [Legionella pneumophila str. Paris]
gi|148282540|gb|ABQ56628.1| transcriptional regulator [Legionella pneumophila str. Corby]
gi|307609380|emb|CBW98868.1| hypothetical protein LPW_06561 [Legionella pneumophila 130b]
gi|364507338|gb|AEW50862.1| transcriptional regulator [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|395126562|emb|CCD04745.1| conserved protein of unknown function [Legionella pneumophila
subsp. pneumophila]
Length = 187
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 17/151 (11%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSL--MSIKEMRSTVLDAAGTFSD 182
LLIA L + FER+V+ + G G+I+NRP +SI + + +
Sbjct: 11 LLIAMPSLKDPN-FERSVVYLCEHNEQGSVGLIINRPLQFPLSIVFEQLQIEPIRVEKNG 69
Query: 183 RPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV- 240
PL FGGP++ E F++ + GG +S +F Q + TV + ++++ A
Sbjct: 70 LPLLFGGPVQPERGFVIHKQMGG---WRSSLFLQ--------DEVTVTTSNDIIRAIAYD 118
Query: 241 -GPEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270
GP+D G W ++QL EI + W V
Sbjct: 119 EGPKDVLITLGYAAWTEQQLEREIMSNTWLV 149
>gi|409409035|ref|ZP_11257470.1| transcription regulator protein [Herbaspirillum sp. GW103]
gi|386432357|gb|EIJ45185.1| transcription regulator protein [Herbaspirillum sp. GW103]
Length = 253
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 61/154 (39%), Gaps = 22/154 (14%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIK----------EMRSTVLDAAGTFSDRPLF 186
IF TV+ + G G+++N+P+ M++ E+R DA RP+
Sbjct: 80 IFGGTVVYLCEHNHNGALGVVINKPTDMTMDVLFDRINLKLEIRPDTPDAMPELYRRPVM 139
Query: 187 FGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPED 244
FGGP+ E G L S K QV + + T + V A + GP+
Sbjct: 140 FGGPVQVERGFVLHSTSE------KYSSTLQVTDEVALTTSKDVLEAVA----HGDGPQR 189
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GC GW QL EI W PS+I
Sbjct: 190 VLVTLGCSGWSPGQLEGEIGRNGWLTVKADPSII 223
>gi|259647092|sp|C0ZVL8.1|Y6004_RHOE4 RecName: Full=UPF0301 protein RER_60040
gi|226188608|dbj|BAH36712.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length = 201
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 17/186 (9%)
Query: 111 DKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMR 170
D+ A E G LL+++ L F RTVI ++ G G+I+NRPS +++
Sbjct: 9 DRMAWIEPEVRPGSLLVSSTDLTE-PAFRRTVIYMIEHNDAGSLGVIVNRPSETAVQ--- 64
Query: 171 STVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE 226
VL + P L+ GGP+ + L L + G G +G+ + +
Sbjct: 65 -NVLPQWSPLTAHPSALYIGGPVKRDSALCLGIARNGARIDGVAGLRRVDGKVVMVDLDS 123
Query: 227 TVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLG 286
A +V E R F G GW QL+ E+ W V + PS + L +
Sbjct: 124 DPEVIAPLV-------EGIRIFAGYSGWTLGQLDSELEREDWMVISSLPSDV-LTPPRVD 175
Query: 287 LWEELL 292
+W +L
Sbjct: 176 VWARVL 181
>gi|352105564|ref|ZP_08960879.1| transcriptional regulator [Halomonas sp. HAL1]
gi|350598437|gb|EHA14557.1| transcriptional regulator [Halomonas sp. HAL1]
Length = 185
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS---DRPLFFGGPLEEG 194
F ++I + + G G+I NRP ++++ + L+ G S + P+++GGP+ +
Sbjct: 20 FAGSLIYLCDHDSNGCMGVITNRPLEITLEALFDQ-LELGGEASPHRNAPVYYGGPMHKD 78
Query: 195 LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG--PEDFRFFDGCC 252
+ G + S QV +G+ T + ++++ A G PE F GC
Sbjct: 79 RGFILHVGDSQQWDSS---IQVEDGIALTT------SLDILQAFAAGDGPEHFLVCLGCA 129
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVI 278
GWE QL EE++ W SV+
Sbjct: 130 GWEVGQLEEELKENSWLTVEAQSSVL 155
>gi|62263627|gb|AAX78178.1| unknown protein [synthetic construct]
Length = 229
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 73/165 (44%), Gaps = 11/165 (6%)
Query: 111 DKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMR 170
DK +++ K +L+AT + +F ++V+ + + G G+I+N+P ++K++
Sbjct: 21 DKHMLEMYQNHKSEILLATPLIKDDIVFTKSVVYLCQNDRHGAMGLIINKPLADTLKDVF 80
Query: 171 STV-LDAAGTFS---DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE 226
+ + TF + PL+ GGP+ ++ G + + EGL
Sbjct: 81 EELHIPHTNTFKEILEYPLYMGGPISPHKIMILHTTNGRNYTSTIKLD---EGL--AITA 135
Query: 227 TVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
++ ++ N + PE F G W QL +EI++ W V
Sbjct: 136 SIDILEDIA--NNILPEYFLPVVGYSCWTANQLTDEIKSNDWIVT 178
>gi|145593543|ref|YP_001157840.1| hypothetical protein Strop_0987 [Salinispora tropica CNB-440]
gi|145302880|gb|ABP53462.1| protein of unknown function DUF179 [Salinispora tropica CNB-440]
Length = 196
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
E G LL+A L + F+RTV+L+++ EP G G++LNR + + + E VL G
Sbjct: 14 ESMAGRLLVAAPTLKDPN-FDRTVVLLVAHEPGGALGVVLNRATEIPVAE----VLGDWG 68
Query: 179 TFSDRP--LFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
+ P +F GGP++ + L + + F+Q+ + GT + A++
Sbjct: 69 ELARDPGVVFEGGPVQPDSAICLARMR---HPLRPMKSFQQISGAV--GTLDLSVDPAQL 123
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
+ A R F G GW+ QL +EI G W V P
Sbjct: 124 RESIA----GIRVFAGYSGWDSGQLEQEIAGGSWFVLDALP 160
>gi|315127640|ref|YP_004069643.1| hypothetical protein PSM_A2578 [Pseudoalteromonas sp. SM9913]
gi|315016154|gb|ADT69492.1| hypothetical protein PSM_A2578 [Pseudoalteromonas sp. SM9913]
Length = 185
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 16/164 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGPL--E 192
F+R V I G G+++N+P +++ E+ + D + + +F GGP+ +
Sbjct: 20 FKRAVTYICEHNEEGAMGLVINQPIDVTVGELLDKIDIDNDKSQHAAQVTVFAGGPVKTD 79
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
G L SPK G +++ + T + V A PE F G
Sbjct: 80 RGFVLHSPKPG------YSASQKLSSDIMITTSKDVLATL----TTAQAPEQFIITLGYS 129
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GWE+ QL +E+ W + P +I ++ WE + ++G
Sbjct: 130 GWEQGQLEQELLDNSWLIIKADPKII-FDTPVEKRWEMAVSMLG 172
>gi|45656419|ref|YP_000505.1| hypothetical protein LIC10521 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|417762819|ref|ZP_12410806.1| hypothetical protein LEP1GSC027_0237 [Leptospira interrogans str.
2002000624]
gi|417767446|ref|ZP_12415386.1| hypothetical protein LEP1GSC007_0834 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417770737|ref|ZP_12418641.1| hypothetical protein LEP1GSC014_2923 [Leptospira interrogans
serovar Pomona str. Pomona]
gi|417775967|ref|ZP_12423811.1| hypothetical protein LEP1GSC025_0220 [Leptospira interrogans str.
2002000621]
gi|417784316|ref|ZP_12432024.1| hypothetical protein LEP1GSC077_4108 [Leptospira interrogans str.
C10069]
gi|418672039|ref|ZP_13233381.1| hypothetical protein LEP1GSC026_2782 [Leptospira interrogans str.
2002000623]
gi|418683015|ref|ZP_13244227.1| hypothetical protein LEP1GSC045_2206 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418690586|ref|ZP_13251697.1| hypothetical protein LEP1GSC080_2904 [Leptospira interrogans str.
FPW2026]
gi|418700588|ref|ZP_13261530.1| hypothetical protein LEP1GSC087_4090 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|418708405|ref|ZP_13269209.1| hypothetical protein LEP1GSC097_4681 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418717446|ref|ZP_13277108.1| hypothetical protein LEP1GSC099_2105 [Leptospira interrogans str.
UI 08452]
gi|418723207|ref|ZP_13282049.1| hypothetical protein LEP1GSC104_0887 [Leptospira interrogans str.
UI 12621]
gi|418728196|ref|ZP_13286774.1| hypothetical protein LEP1GSC105_4900 [Leptospira interrogans str.
UI 12758]
gi|421087317|ref|ZP_15548157.1| hypothetical protein LEP1GSC173_4258 [Leptospira santarosai str.
HAI1594]
gi|421101077|ref|ZP_15561691.1| hypothetical protein LEP1GSC117_1487 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|421115845|ref|ZP_15576242.1| hypothetical protein LEP1GSC069_0849 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|421120761|ref|ZP_15581068.1| hypothetical protein LEP1GSC057_3975 [Leptospira interrogans str.
Brem 329]
gi|421125323|ref|ZP_15585576.1| hypothetical protein LEP1GSC020_3532 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421135412|ref|ZP_15595535.1| hypothetical protein LEP1GSC009_3469 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|45599654|gb|AAS69142.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|400325268|gb|EJO77545.1| hypothetical protein LEP1GSC045_2206 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400349952|gb|EJP02234.1| hypothetical protein LEP1GSC007_0834 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|400360264|gb|EJP16241.1| hypothetical protein LEP1GSC080_2904 [Leptospira interrogans str.
FPW2026]
gi|409941370|gb|EKN87000.1| hypothetical protein LEP1GSC027_0237 [Leptospira interrogans str.
2002000624]
gi|409947228|gb|EKN97228.1| hypothetical protein LEP1GSC014_2923 [Leptospira interrogans
serovar Pomona str. Pomona]
gi|409952576|gb|EKO07087.1| hypothetical protein LEP1GSC077_4108 [Leptospira interrogans str.
C10069]
gi|409963333|gb|EKO27059.1| hypothetical protein LEP1GSC104_0887 [Leptospira interrogans str.
UI 12621]
gi|410012622|gb|EKO70716.1| hypothetical protein LEP1GSC069_0849 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410020482|gb|EKO87284.1| hypothetical protein LEP1GSC009_3469 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410346386|gb|EKO97384.1| hypothetical protein LEP1GSC057_3975 [Leptospira interrogans str.
Brem 329]
gi|410368873|gb|EKP24247.1| hypothetical protein LEP1GSC117_1487 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|410430132|gb|EKP74503.1| hypothetical protein LEP1GSC173_4258 [Leptospira santarosai str.
HAI1594]
gi|410437230|gb|EKP86333.1| hypothetical protein LEP1GSC020_3532 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410574171|gb|EKQ37209.1| hypothetical protein LEP1GSC025_0220 [Leptospira interrogans str.
2002000621]
gi|410580643|gb|EKQ48462.1| hypothetical protein LEP1GSC026_2782 [Leptospira interrogans str.
2002000623]
gi|410760489|gb|EKR26685.1| hypothetical protein LEP1GSC087_4090 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|410771232|gb|EKR46441.1| hypothetical protein LEP1GSC097_4681 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410777067|gb|EKR57037.1| hypothetical protein LEP1GSC105_4900 [Leptospira interrogans str.
UI 12758]
gi|410787043|gb|EKR80778.1| hypothetical protein LEP1GSC099_2105 [Leptospira interrogans str.
UI 08452]
gi|455668824|gb|EMF34010.1| hypothetical protein LEP1GSC201_3357 [Leptospira interrogans
serovar Pomona str. Fox 32256]
gi|456823288|gb|EMF71758.1| hypothetical protein LEP1GSC148_3625 [Leptospira interrogans
serovar Canicola str. LT1962]
gi|456972410|gb|EMG12820.1| hypothetical protein LEP1GSC151_4973 [Leptospira interrogans
serovar Grippotyphosa str. LT2186]
gi|456986682|gb|EMG22193.1| hypothetical protein LEP1GSC150_4365 [Leptospira interrogans
serovar Copenhageni str. LT2050]
Length = 182
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ E G +LI+ + + F RTVIL++ + G G++LN+ SI E+ + D
Sbjct: 1 MEENYSGKILISNSSI-VMDYFNRTVILMVEHDNQGAFGLVLNKRQEASIGEVIQGIPDH 59
Query: 177 AGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
+ ++ GGP++ +S +++ + G+ +++ GLY + E++K
Sbjct: 60 VS--RNLLIYSGGPVDPT--FISVLHEDNKISQPGI--EIIPGLYLA--RSFDTLLELLK 111
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
++ F F G GW QL E+ W + S + L W+E L
Sbjct: 112 SSS----KFHVFQGYSGWGAGQLETEMNRKSWVIHEASKDFV-LNQDPETTWQEAL 162
>gi|372487279|ref|YP_005026844.1| putative transcriptional regulator [Dechlorosoma suillum PS]
gi|359353832|gb|AEV25003.1| putative transcriptional regulator [Dechlorosoma suillum PS]
Length = 186
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 25/163 (15%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFS 181
LIA +D + F R ++ + G GI++N+P M ++++ V LDAAG +
Sbjct: 10 FLIAMPAMDDPY-FSRALVYVCEHNDQGALGIVVNKPLDMPLQDLFEKVDIPLDAAG-LN 67
Query: 182 DRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+ P++FGGP++ G L P G + VG + A
Sbjct: 68 NLPVYFGGPVQTDRGFVLHRPVGQWQST--------------LAVNDEVGLTSSRDILVA 113
Query: 240 VG----PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+G P + G GW QL E+ W PS++
Sbjct: 114 MGRQGQPSEVLVTLGYAGWGAGQLESELAQNGWLTVRADPSIV 156
>gi|88800231|ref|ZP_01115799.1| hypothetical protein MED297_14077 [Reinekea blandensis MED297]
gi|88777077|gb|EAR08284.1| hypothetical protein MED297_14077 [Reinekea sp. MED297]
Length = 183
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 19/160 (11%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSD 182
LIA ++ G +F T+ ++ + G G+I+NRP ++++E+ S + +
Sbjct: 7 FLIAMPQM-GDPVFSGTLTYLVQHDEQGALGLIVNRPLNLNLEEVFESSELSGYSPRTGS 65
Query: 183 RPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
+P++ GGP+ E+G L P EQ + + + +M++ A
Sbjct: 66 KPVYHGGPVAQEQGFILHPPT------------EQTWISSLSNEQLVLTTSRDMLEAIAQ 113
Query: 241 --GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GPE F F G GW QL EE++ W + ++I
Sbjct: 114 DEGPERFLFCLGYSGWSPGQLEEELKENAWLTVEANEAII 153
>gi|418666646|ref|ZP_13228065.1| hypothetical protein LEP1GSC019_0740 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|410757427|gb|EKR19038.1| hypothetical protein LEP1GSC019_0740 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
Length = 182
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ E G +LI+ + + F RTVIL++ + G G++LN+ SI E+ + D
Sbjct: 1 MEENYSGKILISNSSI-VMDYFNRTVILMVEHDNQGAFGLVLNKRQEASIGEVIQGIPDH 59
Query: 177 AGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
+ ++ GGP++ +S +++ + G+ +++ GLY + E++K
Sbjct: 60 VS--RNLLIYSGGPVDPT--FISVLHEDNKISQPGI--EIIPGLYLA--RSFDTLLELLK 111
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
++ F F G GW QL E+ W + S + L W+E L
Sbjct: 112 SSS----KFHVFQGYSGWGAWQLETEMNRKSWVIHEASKDFV-LNQDPETTWQEAL 162
>gi|392546374|ref|ZP_10293511.1| hypothetical protein PrubA2_08389 [Pseudoalteromonas rubra ATCC
29570]
Length = 185
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVL---DAAGTFSDRPLFFGGPL--E 192
F+ TV I G G+++N P +++ E+ + D + + + +F GGP+ +
Sbjct: 20 FKHTVTYICEHNEEGAMGLVVNHPINVTVGELLDQIEIDNDKSSNAASQSVFAGGPVHTD 79
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
G L +PK G ++ + T + V A + N P+ F G
Sbjct: 80 RGFVLHTPKPG------YASSRELSSDMMITTSKDV--LASLTSHNC--PDAFIITLGYS 129
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GWE+ QL +EI W + P++I + WE+ + ++G
Sbjct: 130 GWEQGQLEKEILENSWLIIEADPAII-FNTPPEKRWEKAVEMLG 172
>gi|37525151|ref|NP_928495.1| hypothetical protein plu1183 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|46577361|sp|Q7N7G6.1|Y1183_PHOLL RecName: Full=UPF0301 protein plu1183
gi|36784577|emb|CAE13477.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 187
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 20/180 (11%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRP-SLMSIK----EMRSTVLDAAGT 179
LIA L + F+R+V+ I G G+++N+P +S++ +++ + D +
Sbjct: 7 FLIAMPSLSDPY-FKRSVVYICEHNANGAMGLVINKPIEQISVRKVLQKLKISPEDRDES 65
Query: 180 FS-DRPLFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
+ ++P+ GGPL E G L +PK G K + + M ET+G +
Sbjct: 66 VNLNKPVMTGGPLAEDHGFILHTPKPGFSSSIK--ISDDTMITTSKDVLETLGTPRQ--- 120
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
P+ G WEK QL +EI W P +I S W E L+G
Sbjct: 121 -----PKQILVTLGYTSWEKGQLEKEIMENSWLTTNADPHII-FNSPIADRWREAASLLG 174
>gi|379711549|ref|YP_005266754.1| hypothetical protein NOCYR_5375 [Nocardia cyriacigeorgica GUH-2]
gi|374849048|emb|CCF66124.1| conserved protein of unknown function [Nocardia cyriacigeorgica
GUH-2]
Length = 177
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 12/157 (7%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPL--EEGL 195
F RTVI I+ G G+++NRPS ++ ++ + A + R LF GGP+ + L
Sbjct: 11 FRRTVIYIIEHNDAGSLGVVINRPSDTAVHDVLPQWAEVAA--APRTLFVGGPVKRDAAL 68
Query: 196 FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWE 255
L + + G G +G+ + A +V E R F G GW
Sbjct: 69 CLGTLRVGASIEGVAGLRRIDGRVVLIDLDSDPTRIAPLV-------EGVRIFAGYAGWT 121
Query: 256 KEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
QL E+ W V + PS + S LW E+L
Sbjct: 122 FGQLEGELEQDDWIVLSALPS-DPITSRRTDLWAEVL 157
>gi|262193656|ref|YP_003264865.1| hypothetical protein [Haliangium ochraceum DSM 14365]
gi|262077003|gb|ACY12972.1| protein of unknown function DUF179 [Haliangium ochraceum DSM 14365]
Length = 198
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 21/179 (11%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL LD F R+V+L++ + G G+++N+P+ +S+ E+ ++ A S+
Sbjct: 9 GLLLAMPHLLD--PNFRRSVVLMVEHDDEGSFGLVVNQPTELSMDELYESLDLAWKGSSE 66
Query: 183 RPLFFGGP-LEEGLFLV-SPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
++ GGP + L+LV +P G + G L G TV E+ A+
Sbjct: 67 AMVWRGGPVMPTHLWLVHAPLAGSSDSGTESAL------LGLGDGGTVAVGPELRVSGAM 120
Query: 241 ----------GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWE 289
P R G GW QL +E+ G W +P +I E+ +WE
Sbjct: 121 PELIEMFGNEPPAQLRVLLGYAGWGGGQLAQEMSQGAWLHVDATPELI-FETPAEEMWE 178
>gi|54293568|ref|YP_125983.1| hypothetical protein lpl0620 [Legionella pneumophila str. Lens]
gi|81369177|sp|Q5WYW5.1|Y620_LEGPL RecName: Full=UPF0301 protein lpl0620
gi|53753400|emb|CAH14853.1| hypothetical protein lpl0620 [Legionella pneumophila str. Lens]
Length = 187
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 17/151 (11%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSL--MSIKEMRSTVLDAAGTFSD 182
LLIA L + FER+V+ + G G+I+NRP +SI + + +
Sbjct: 11 LLIAMPSLKDPN-FERSVVYLCEHNEQGSVGLIINRPLQFPLSIVFEQLQIEPIRVEKNG 69
Query: 183 RPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV- 240
PL FGGP++ E F++ + GG +S +F Q + TV + ++++ A
Sbjct: 70 LPLLFGGPVQPERGFVIHKQMGG---WRSSLFLQ--------DEVTVTTSNDIIRAIAYD 118
Query: 241 -GPEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270
GP+D G W ++QL EI + W V
Sbjct: 119 EGPKDVLITLGYAAWTEQQLEREIMSNTWLV 149
>gi|407701076|ref|YP_006825863.1| transcriptional regulator [Alteromonas macleodii str. 'Black Sea
11']
gi|407250223|gb|AFT79408.1| transcription regulator [Alteromonas macleodii str. 'Black Sea 11']
Length = 188
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD-- 182
L+A LD + F R++I + G GI++N+PS M++K++ D T SD
Sbjct: 11 FLVAMPSLDDPY-FSRSLIYVCEHNAEGAMGIVVNQPSTMNVKQLLEQT-DKELTVSDDK 68
Query: 183 --RPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
+ + GGP+ E G L S + K ++ G+ T + + A N
Sbjct: 69 AEQIVLAGGPVSQERGFVLHSSQ------KKWASSLKLAPGIMVTTSKDILTAI----AN 118
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYW 268
GPED G GW QL +E++ W
Sbjct: 119 NEGPEDVLIALGYAGWTAGQLEKEMQENAW 148
>gi|418702863|ref|ZP_13263755.1| hypothetical protein LEP1GSC096_0691 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410767407|gb|EKR38082.1| hypothetical protein LEP1GSC096_0691 [Leptospira interrogans
serovar Hebdomadis str. R499]
Length = 182
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ E G +LI+ + + F RTVIL++ + G G++LN+ SI E+ + D
Sbjct: 1 MEENYSGKILISNSSI-VMDYFNRTVILMVEHDNQGAFGLVLNKRQEASIGEVIQGIPDN 59
Query: 177 AGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
+ ++ GGP++ +S +++ + G+ +++ GLY + E++K
Sbjct: 60 VS--RNLLIYSGGPVDPT--FISVLHEDNKISQPGI--EIIPGLYLA--RSFDTLLELLK 111
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
++ F F G GW QL E+ W + S + L W+E L
Sbjct: 112 SSS----KFHVFQGYSGWGAGQLETEMNRKSWVIHEASKDFV-LNQDPETTWQEAL 162
>gi|359394520|ref|ZP_09187573.1| UPF0301 protein [Halomonas boliviensis LC1]
gi|357971767|gb|EHJ94212.1| UPF0301 protein [Halomonas boliviensis LC1]
Length = 185
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR--PLFFGGPLEEGL 195
F ++I + + G G+I NRP ++++ + + T R P+++GGP+ +
Sbjct: 20 FAGSLIYLCDHDNNGCMGVITNRPLEITLEALFDQLELGGETSPHRNAPVYYGGPMHKDR 79
Query: 196 FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWE 255
+ G + S QV +G+ T + A + GPE F GC GWE
Sbjct: 80 GFILHVGDSQQWDSS---IQVEDGIALTTSLDILQAFAAGE----GPEHFLVCLGCAGWE 132
Query: 256 KEQLNEEIRAGYWTVAACSPSVI 278
QL EE++ W SV+
Sbjct: 133 VGQLEEELKENSWLTVEAQSSVL 155
>gi|406661537|ref|ZP_11069655.1| hypothetical protein B879_01672 [Cecembia lonarensis LW9]
gi|405554686|gb|EKB49762.1| hypothetical protein B879_01672 [Cecembia lonarensis LW9]
Length = 189
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 30/157 (19%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LLI+ L + F R+V+L+ G G++LN+ S++ +KE+ + D
Sbjct: 12 GNLLISEPFLQDEN-FVRSVVLLCENNENGSFGLVLNKLSILKLKELIDNI-----NSLD 65
Query: 183 RPLFFGGPLEEGLFLVSPKGG---------GDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
++ GGP+E+ +G G ++ G F++++E L G E
Sbjct: 66 CDVYVGGPVEQNTLHFIYRGERRFEASIQLGVDLWWGGDFDELLEQLKLGKME------- 118
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270
+ RFF G GW QL+EE++ W V
Sbjct: 119 --------EGNIRFFIGYSGWGAGQLDEELKDKTWIV 147
>gi|395796083|ref|ZP_10475382.1| hypothetical protein A462_12480 [Pseudomonas sp. Ag1]
gi|421140946|ref|ZP_15600940.1| hypothetical protein MHB_16451 [Pseudomonas fluorescens BBc6R8]
gi|395339721|gb|EJF71563.1| hypothetical protein A462_12480 [Pseudomonas sp. Ag1]
gi|404507717|gb|EKA21693.1| hypothetical protein MHB_16451 [Pseudomonas fluorescens BBc6R8]
Length = 189
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 138 FERTVILILSMEPMGPSGIILNRP---SLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEG 194
F +T+ I+ G G+++NRP +L I E +D + P++ GGP++
Sbjct: 25 FAQTLTYIVEHTANGAMGLVVNRPQDLNLADILEQLRPDIDPPASCQHVPIYIGGPVQTD 84
Query: 195 L-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
F++ P G + +EGL T + V A + VGP+ G G
Sbjct: 85 RGFVLHPTGPKFQATVD------LEGLSLSTSQDVLFAIA----DGVGPDQSVITLGYAG 134
Query: 254 WEKEQLNEEIRAGYW 268
WE QL E+ + W
Sbjct: 135 WEAGQLEAELASNAW 149
>gi|254389770|ref|ZP_05004994.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|294812894|ref|ZP_06771537.1| Putative transcriptional regulator [Streptomyces clavuligerus ATCC
27064]
gi|197703481|gb|EDY49293.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|294325493|gb|EFG07136.1| Putative transcriptional regulator [Streptomyces clavuligerus ATCC
27064]
Length = 189
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 19/157 (12%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + + +L++ +
Sbjct: 12 GRLLVATPALADPN-FDRAVVLLLDHDDEGTLGVVLNRPTPVGVAD----ILESWAALAG 66
Query: 183 RP--LFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
P +F GGP L+ L + G +G V+ + E +G A
Sbjct: 67 EPGVVFQGGPVSLDSALGVAVIPGDEGPIGWRRVYGAIGLVDLETPPELLGAAL------ 120
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
R F G GW QL E+ G W V P
Sbjct: 121 ----GSLRIFAGYAGWGPGQLEAELEEGAWYVVDSEP 153
>gi|302560393|ref|ZP_07312735.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
gi|302478011|gb|EFL41104.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
Length = 193
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 78/175 (44%), Gaps = 18/175 (10%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + + +L+ +
Sbjct: 12 GRLLVATPALADPN-FDRAVVLLLDHDEEGSLGVVLNRPTPVDVGD----ILEGWADLTG 66
Query: 183 RP--LFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
P +F GGP L+ L + V P G E G + V + E A +
Sbjct: 67 EPGVVFQGGPVSLDSALGVAVVPGGTTAEAAPPG-WRPVHGAIGLVDLE----APPELLA 121
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
A+G R F G GW QL +E+ G W V P + S LW E+L
Sbjct: 122 PALG--SLRIFAGYAGWGPGQLEDELVDGAWYVVESEPGDVSSPSPER-LWREVL 173
>gi|425746020|ref|ZP_18864052.1| hypothetical protein ACINWC323_0349 [Acinetobacter baumannii
WC-323]
gi|425486669|gb|EKU53034.1| hypothetical protein ACINWC323_0349 [Acinetobacter baumannii
WC-323]
Length = 168
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 60/143 (41%), Gaps = 12/143 (8%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPL--EEGL 195
F TVI + + G GII+NRPS + IKE+ + + A + GGPL E G
Sbjct: 6 FANTVIYVARHDEDGAQGIIINRPSELQIKELLNDLEIDADNVHPHAVLQGGPLRPEAGF 65
Query: 196 FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWE 255
L + G S + V E + T + + A + VG ++ G W
Sbjct: 66 VLHT----GQPTWHSSI--AVGENVCITTSKDILDA--IAHNEGVGR--YQIALGYASWS 115
Query: 256 KEQLNEEIRAGYWTVAACSPSVI 278
K QL EEI G W + +I
Sbjct: 116 KNQLEEEITRGDWLICESDMDLI 138
>gi|302767822|ref|XP_002967331.1| hypothetical protein SELMODRAFT_439850 [Selaginella moellendorffii]
gi|300165322|gb|EFJ31930.1| hypothetical protein SELMODRAFT_439850 [Selaginella moellendorffii]
Length = 882
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 74/179 (41%), Gaps = 18/179 (10%)
Query: 99 AAVNYPPQNSLGDKWAHTIHEPEK---GCLLIATEKLDGVH-IFERTVILILSMEPMGPS 154
+ V P ++ T E E+ G +L+ATEKL F + ++I+S+
Sbjct: 698 STVQPPSTITIQQNLDETSQEGERIGIGHVLLATEKLSANSPNFANSAVVIVSVTDDYVV 757
Query: 155 GIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEGLFLVSPKG--GGDEVGKSGV 212
G+++N K+M L A + + +GGPL PK +
Sbjct: 758 GLVMN-------KDMPKEELLAVDQRHNVKIGYGGPL-----YTRPKYIFTFTRLQNLEG 805
Query: 213 FEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
F V GL G E+++ N + +F+F G CGW QL EE+ GYW +
Sbjct: 806 FGTVSYGLSAGGPSATEKVFEIIEANKLPASEFKFVAGHCGWTPLQLREELADGYWQLT 864
>gi|117924036|ref|YP_864653.1| hypothetical protein Mmc1_0726 [Magnetococcus marinus MC-1]
gi|189040596|sp|A0L5K4.1|Y726_MAGSM RecName: Full=UPF0301 protein Mmc1_0726
gi|117607792|gb|ABK43247.1| protein of unknown function DUF179 [Magnetococcus marinus MC-1]
Length = 186
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 79/184 (42%), Gaps = 30/184 (16%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAAGTFS 181
G LIA L FERTV+ + + G G+++N+P ++ +M + LD
Sbjct: 8 GKFLIAVPSL-ADPFFERTVLYLCAHNEDGALGLVINQPLDTTMSQMAGYLELDWQRPGV 66
Query: 182 DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVME---------GLYFGTKETVGCAA 232
DR ++ GGP VSP+ G +FEQ ++ LY GT +
Sbjct: 67 DR-VYMGGP-------VSPEQG------FVLFEQALDLPGIMMLPDDLYMGTNPDI---I 109
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
++ R A E F F G GWE QL E++ W V S++ + G WE +
Sbjct: 110 RLMGR-AGAQERFLFALGYAGWEAGQLEHELQENSWLVCDAQRSIL-FDMGYAQRWEAAI 167
Query: 293 WLMG 296
MG
Sbjct: 168 RSMG 171
>gi|294629626|ref|ZP_06708186.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292832959|gb|EFF91308.1| conserved hypothetical protein [Streptomyces sp. e14]
Length = 193
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 14/173 (8%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + ++ D AG
Sbjct: 12 GRLLVATPALADPN-FDRAVVLLLDHDEEGSLGVVLNRPTPVDVGDILEGWADLAGEPGV 70
Query: 183 RPLFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+F GGP L+ L + V P G E G + +V + E A + +A
Sbjct: 71 --VFQGGPVSLDSALGVAVIPGDGPGERAPLG-WRRVHGAIGLIDLE----APPELLASA 123
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+G R F G GW QL +E+ G W V P + + LW E+L
Sbjct: 124 LG--SLRIFAGYAGWGPGQLEDELAEGAWYVVESEPGDVSSPAPER-LWREVL 173
>gi|296106166|ref|YP_003617866.1| transcriptional regulator [Legionella pneumophila 2300/99 Alcoy]
gi|295648067|gb|ADG23914.1| Putative transcriptional regulator [Legionella pneumophila 2300/99
Alcoy]
Length = 187
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 17/151 (11%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSL--MSIKEMRSTVLDAAGTFSD 182
LLIA L + FER+V+ + G G+I+NRP +SI + + +
Sbjct: 11 LLIAMPSLKDPN-FERSVVYLCEHNEQGSVGLIINRPLQFPLSIVFEQLQIEPIRVEKNG 69
Query: 183 RPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV- 240
PL FGGP++ E F++ + GG +S +F Q + TV + ++++ A
Sbjct: 70 LPLLFGGPVQPERGFVIHKQMGG---WRSSLFLQ--------DEVTVTTSNDIIRAIAYD 118
Query: 241 -GPEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270
GP+D G W ++QL EI + W +
Sbjct: 119 EGPKDVLITLGYAAWTEQQLEREIMSNTWLI 149
>gi|157372261|ref|YP_001480250.1| hypothetical protein Spro_4027 [Serratia proteamaculans 568]
gi|166979953|sp|A8GJ32.1|Y4027_SERP5 RecName: Full=UPF0301 protein Spro_4027
gi|157324025|gb|ABV43122.1| protein of unknown function DUF179 [Serratia proteamaculans 568]
Length = 187
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 22/151 (14%)
Query: 138 FERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGGP 190
F+R+VI + G G+++N+P +++S ++ D A + D+P+F GGP
Sbjct: 19 FKRSVIYVCEHNEDGAMGLVINKPVEQFTVETVLSKLKIMPQARDPAISL-DKPVFAGGP 77
Query: 191 L--EEGLFLVSP-KGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRF 247
L + G L +P KG G + S M ET+G + P+D
Sbjct: 78 LADDRGFILHTPRKGFGSSIQIS---PDTMITTSKDVLETLGTPEQ--------PDDVLV 126
Query: 248 FDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GWEK QL +E+ W ++
Sbjct: 127 ALGYAGWEKGQLEQEVLENAWLTIEADTDIL 157
>gi|359451312|ref|ZP_09240718.1| UPF0301 protein PSHAa2600 [Pseudoalteromonas sp. BSi20480]
gi|392537918|ref|ZP_10285055.1| hypothetical protein Pmarm_07306 [Pseudoalteromonas marina mano4]
gi|358042865|dbj|GAA76967.1| UPF0301 protein PSHAa2600 [Pseudoalteromonas sp. BSi20480]
Length = 185
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 16/164 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVL---DAAGTFSDRPLFFGGPL--E 192
F+R V I G G+++N+P +++ E+ + D + +F GGP+ +
Sbjct: 20 FKRAVTYICEHNEDGAMGLVINQPINVTVGELLDKIEIDNDKTQQAAKVAVFAGGPVKTD 79
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
G L SPK G K + + T + V + A PE F G
Sbjct: 80 RGFVLHSPKLGYTSSQK------LSSDIMITTSKDVLASL----TTAHAPEQFIITLGYA 129
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GWE+ QL +E+ W + P++I + WE+ + ++G
Sbjct: 130 GWEQGQLEQELLDNSWLIIEADPAII-FNTPAEKRWEKAVSMLG 172
>gi|415939649|ref|ZP_11555542.1| Transcriptional regulator [Herbaspirillum frisingense GSF30]
gi|407759283|gb|EKF68998.1| Transcriptional regulator [Herbaspirillum frisingense GSF30]
Length = 178
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 60/154 (38%), Gaps = 22/154 (14%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIK----------EMRSTVLDAAGTFSDRPLF 186
+F TV+ + G G+++N+P+ M++ E+R DA RP+
Sbjct: 5 VFGGTVVYLCEHNHNGALGVVINKPTDMTMDVLFDRINLKLEIRPDTPDAMPELYRRPVM 64
Query: 187 FGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPED 244
FGGP+ E G L S K QV + + T + V A GPE
Sbjct: 65 FGGPVQVERGFVLHSTSE------KYSSTLQVTDDVALTTSKDVLEAVAY----GNGPER 114
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GC GW QL EI W P++I
Sbjct: 115 VLVTLGCSGWSPGQLEGEIGRNGWLTVKADPAII 148
>gi|418743185|ref|ZP_13299554.1| hypothetical protein LEP1GSC122_1170 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|410749928|gb|EKR06912.1| hypothetical protein LEP1GSC122_1170 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 182
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G +LI+ + + F RTVIL++ + G G++LN+ SI E+ + D +
Sbjct: 7 GKILISNSSI-VMDYFNRTVILMVEHDHQGAFGLVLNKRQEASIGEVIQGIPDHVS--RN 63
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
++ GGP++ +S +++ + G+ +++ GLY + E++K ++
Sbjct: 64 LIIYSGGPVDPT--FISVLHEDNKISQPGI--EIIPGLYLA--RSFDTLLELLKSSS--- 114
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
F F G GW QL E+ W + S + L W+E L
Sbjct: 115 -KFHVFQGYSGWGAGQLETEMNRKSWVIHEASKDFV-LNQDPETTWQEAL 162
>gi|343928703|ref|ZP_08768148.1| hypothetical protein GOALK_120_01310 [Gordonia alkanivorans NBRC
16433]
gi|343761452|dbj|GAA15074.1| hypothetical protein GOALK_120_01310 [Gordonia alkanivorans NBRC
16433]
Length = 225
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 79/189 (41%), Gaps = 15/189 (7%)
Query: 114 AHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV 173
A H G LIA+ L F RTVI ++ G G++LNR S ++ +
Sbjct: 36 ADPTHRVRPGTALIASTDL-IEPTFARTVIYVIEHNEAGSLGVVLNRMSQTAVHNLLPQW 94
Query: 174 LDAAGTFSDRPLFFGGPLEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAA 232
D A S R L+ GGP+++ L + G +V V G V A
Sbjct: 95 TDIAA--SPRALYIGGPVKQDAALCLGVMKHGYDVDDHPALRPV-----DGRVVLVDLDA 147
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+ + V E R F G GW QL++E+ W +A+ P + L + +W ++L
Sbjct: 148 DPEPLSEVL-EGVRIFAGYSGWGIGQLDDELDQFSWMLASALPRDL-LAPPGVDVWFDML 205
Query: 293 WLMGRRKVW 301
RR+ W
Sbjct: 206 ----RRQPW 210
>gi|326441329|ref|ZP_08216063.1| hypothetical protein SclaA2_09694 [Streptomyces clavuligerus ATCC
27064]
Length = 186
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 19/157 (12%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + + +L++ +
Sbjct: 9 GRLLVATPALADPN-FDRAVVLLLDHDDEGTLGVVLNRPTPVGVAD----ILESWAALAG 63
Query: 183 RP--LFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
P +F GGP L+ L + G +G V+ + E +G A
Sbjct: 64 EPGVVFQGGPVSLDSALGVAVIPGDEGPIGWRRVYGAIGLVDLETPPELLGAAL------ 117
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
R F G GW QL E+ G W V P
Sbjct: 118 ----GSLRIFAGYAGWGPGQLEAELEEGAWYVVDSEP 150
>gi|410612167|ref|ZP_11323248.1| hypothetical protein GPSY_1504 [Glaciecola psychrophila 170]
gi|410168301|dbj|GAC37137.1| hypothetical protein GPSY_1504 [Glaciecola psychrophila 170]
Length = 185
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 16/162 (9%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
+ LLIA+ ++ + F RTV I G G+++N+P M +KE+ + V D A
Sbjct: 5 QNYLLIASPSMEDPY-FARTVTYICEHNEHGAMGLVINQPVGMKLKELVAQVDDKAEVID 63
Query: 182 DRP---LFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
++ + GGP+ + G L + + G + E + +K+ +
Sbjct: 64 EKAQNIILAGGPVSQDRGFILHTTQPGW-----ASSLTMTPEVMVTTSKDIISSLG---- 114
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
N PE G GW QL EEI+ W + ++
Sbjct: 115 -NKDAPEKSLIMLGYAGWTAGQLEEEIQTSSWLMVEADTEIL 155
>gi|51473309|ref|YP_067066.1| hypothetical protein RT0098 [Rickettsia typhi str. Wilmington]
gi|81390268|sp|Q68XQ8.1|Y098_RICTY RecName: Full=UPF0301 protein RT0098
gi|51459621|gb|AAU03584.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
Length = 189
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 21/173 (12%)
Query: 111 DKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR-PSLMSIKEM 169
DK H + G L+AT + I+ +++I +LS G G+I NR + + +K
Sbjct: 3 DKIFHNL----SGKTLVATPYVITKGIYHKSLIYMLSHTEEGAIGLIFNRLVNHVDLKSF 58
Query: 170 RSTVLDAAGTFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKET 227
D + P++ GGP+ E+G FL S + + L F
Sbjct: 59 FKIKEDKITSQVIVPIYLGGPIEHEKGFFLHSRDYNKNLL------------LDFHNDLA 106
Query: 228 VGCAAEMVKRNAV--GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
V E+ + A GP++ F G W+ QL EE+ W V C+ I
Sbjct: 107 VSSNLEISEDIAFGQGPKNSLFIVGYTAWKPGQLEEELEKNLWLVMDCNKEFI 159
>gi|408826880|ref|ZP_11211770.1| hypothetical protein SsomD4_06783 [Streptomyces somaliensis DSM
40738]
Length = 186
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
G LL+AT L + F+R V+L+L + G G++LNRP+ + + + VL+ +
Sbjct: 8 AGRLLVATPALADPN-FDRAVVLLLDHDDEGSLGVVLNRPTPVGVGD----VLEPWAPLA 62
Query: 182 DRP--LFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
P +F GGP+ L GDE G G + +G
Sbjct: 63 GEPGVVFQGGPVSLDAALGVAVIPGDE-GPLG---------WRRVHGAIGLVDLEAPPEL 112
Query: 240 VGPE--DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPS 276
+GP R F G GW QL EE+ G W V P
Sbjct: 113 LGPALGSLRIFAGYAGWGPGQLEEELGGGAWFVVESEPG 151
>gi|383752085|ref|YP_005427185.1| hypothetical protein RTTH1527_00480 [Rickettsia typhi str. TH1527]
gi|383842920|ref|YP_005423423.1| hypothetical protein RTB9991CWPP_00480 [Rickettsia typhi str.
B9991CWPP]
gi|380758728|gb|AFE53963.1| hypothetical protein RTTH1527_00480 [Rickettsia typhi str. TH1527]
gi|380759567|gb|AFE54801.1| hypothetical protein RTB9991CWPP_00480 [Rickettsia typhi str.
B9991CWPP]
Length = 189
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 21/173 (12%)
Query: 111 DKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR-PSLMSIKEM 169
DK H + G L+AT + I+ +++I +LS G G+I NR + + +K
Sbjct: 3 DKIFHNL----SGKTLVATPYVITKGIYHKSLIYMLSHTEEGAIGLIFNRLVNHVDLKSF 58
Query: 170 RSTVLDAAGTFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKET 227
D + P++ GGP+ E+G FL S + + L F
Sbjct: 59 FKIKEDKITSQVIVPIYLGGPIEHEKGFFLHSRDYNKNLL------------LDFHNDLA 106
Query: 228 VGCAAEMVKRNAV--GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
V E+ + A GP++ F G W+ QL EE+ W V C+ I
Sbjct: 107 VSSNLEISEDIAFGKGPKNSLFIVGYTAWKPGQLEEELEKNLWLVMDCNKEFI 159
>gi|386857766|ref|YP_006261943.1| hypothetical protein DGo_CA2558 [Deinococcus gobiensis I-0]
gi|380001295|gb|AFD26485.1| hypothetical protein DGo_CA2558 [Deinococcus gobiensis I-0]
Length = 175
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
L+A+ L G +F VIL+L + G G+I+N P+ ++ E+ DA G D
Sbjct: 6 TFLVASPHLHGA-VFGGAVILLLEHDLGGAMGLIVNAPAPQTVTELMP---DAPG--QDE 59
Query: 184 PLFFGGPLEEGL-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
P + GGP++ L + + P + +G G +++ GL V + ++++
Sbjct: 60 PAWLGGPVDPSLGWCLYP----EPLGLEGEM-RLLPGL------NVTSSLDVLRAVMAAG 108
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWT 269
+ + G GW QL EE RAG W
Sbjct: 109 QRYMLVLGYAGWRAGQLAEEARAGAWV 135
>gi|333992966|ref|YP_004525580.1| hypothetical protein JDM601_4326 [Mycobacterium sp. JDM601]
gi|333488934|gb|AEF38326.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length = 204
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 79/195 (40%), Gaps = 27/195 (13%)
Query: 114 AHTIHEPEKGCLLIA-TEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRST 172
A H G LL+A T+ L+ F RTVI ++ G G++LNRPS ++
Sbjct: 15 APAAHRVRAGTLLLANTDLLEPT--FRRTVIYVVEHNDGGTLGVVLNRPSETAVY----N 68
Query: 173 VLDAAGTFSDRP--LFFGGPLEEGLFLVSP--KGGGDEVGKSGVFEQVMEGLYFGTKETV 228
VL + +P +F GGP++ L K G D GV G V
Sbjct: 69 VLPQWSELAAKPKTMFIGGPVKRDAALCVGLLKIGADPNDVPGVRH------IDGRLVMV 122
Query: 229 GCAAEMVKRNAVGP--EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLG 286
AE ++ P E R F G GW QL EI W V + PS + L +
Sbjct: 123 DLDAE---PESIAPHVEGVRIFAGYAGWTIGQLEGEIERDDWIVLSALPSDV-LVPPRVD 178
Query: 287 LWEELLWLMGRRKVW 301
+W L RR+ W
Sbjct: 179 VWSRAL----RRQPW 189
>gi|188534952|ref|YP_001908749.1| hypothetical protein ETA_28320 [Erwinia tasmaniensis Et1/99]
gi|226701534|sp|B2VF12.1|Y2832_ERWT9 RecName: Full=UPF0301 protein ETA_28320
gi|188029994|emb|CAO97878.1| Conserved hypothetical protein (DUF179) [Erwinia tasmaniensis
Et1/99]
Length = 187
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 14/148 (9%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS------DRPLFFGGP 190
+F+R+V+ I G G+I+N+P E L A T D+P+F GGP
Sbjct: 18 LFKRSVVYICEHNADGAMGLIVNKPMENLTVEGILKKLKIAPTAREPDIRLDKPVFSGGP 77
Query: 191 LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDG 250
L E + V + + ET+G A + P++ G
Sbjct: 78 LAEDRGFILHSAQKTFTSSIRVSDNTVITTSRDVLETLGTAEQ--------PDNVLVALG 129
Query: 251 CCGWEKEQLNEEIRAGYWTVAACSPSVI 278
C WEK+QL +E+ W + + +++
Sbjct: 130 YCAWEKDQLEQELLENAWLTSPANSNIL 157
>gi|30725042|dbj|BAC76620.1| hypothetical protein [Streptomyces thermoviolaceus]
Length = 192
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + ++ D AG
Sbjct: 12 GRLLVATPALADPN-FDRAVVLLLDHDEEGSLGVVLNRPTPVGVGDILEGWADLAGEPGV 70
Query: 183 RPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
+F GGP L+ L + GG G + +V + E A + +A+
Sbjct: 71 --VFQGGPVSLDSALGVAVVPGGASGEAPLG-WRRVHGAIGLVDLE----APPELLASAL 123
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
G R F G GW QL +E+ G W V P
Sbjct: 124 G--SLRIFAGYAGWGPGQLEDELVEGAWYVVESEP 156
>gi|406038427|ref|ZP_11045782.1| hypothetical protein AursD1_01055 [Acinetobacter ursingii DSM 16037
= CIP 107286]
Length = 184
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 65/157 (41%), Gaps = 14/157 (8%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
CL+ E D F TVI + + G G+I+NRPS + +KE+ + + A
Sbjct: 10 CLIAPPEMADD--FFANTVIYLARHDEEGAQGLIINRPSGIQVKELLNDLDIDADHVQPH 67
Query: 184 PLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ GGPL E G L + G S + V E L T + + A + VG
Sbjct: 68 EVLQGGPLRPEAGFVLHT----GQPTWHSSI--AVGENLCITTSKDILDA--IAHNEGVG 119
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
++ G W K QL +EI G W V +I
Sbjct: 120 R--YQIALGYASWSKNQLEDEISRGDWLVCDSDMDLI 154
>gi|383112893|ref|ZP_09933678.1| UPF0301 protein [Bacteroides sp. D2]
gi|382948945|gb|EFS29549.2| UPF0301 protein [Bacteroides sp. D2]
Length = 207
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 33/189 (17%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR--PSLMSIKEMRSTVLDAA 177
P +G +LI+ L F R+VIL++ G G+++N+ P ++ + LD
Sbjct: 28 PSRGRILISEPFLRDA-TFGRSVILLVDHTDEGSMGLVINKQLPLFLNDIILEFKYLDEI 86
Query: 178 GTFSDRPLFFGGPL-EEGLFLV---SPKGGGDEVGK----SGVFEQVMEGLYFGTKETVG 229
PL+ GGP+ + LF + S G + K +G F+++ + + G K +
Sbjct: 87 ------PLYKGGPIATDTLFYLHTLSDIPGSISISKGLYLNGDFDEIKKYILQGNKIS-- 138
Query: 230 CAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWE 289
E RFF G GW+ EQL+ EIR W V+ S + +++ +W
Sbjct: 139 -------------ECIRFFLGYSGWDSEQLSNEIRENTWLVSEEEKSYL-MKNNIKDMWR 184
Query: 290 ELLWLMGRR 298
+ L +G +
Sbjct: 185 KALEKLGSK 193
>gi|340785991|ref|YP_004751456.1| hypothetical protein CFU_0799 [Collimonas fungivorans Ter331]
gi|340551258|gb|AEK60633.1| UPF0301 protein yqgE [Collimonas fungivorans Ter331]
Length = 244
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 24/156 (15%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV------------LDAAGTFSDRP 184
+F TV+ + G G+++N+P+ M+++ + + L+ ++RP
Sbjct: 69 VFGGTVVYLCEHNANGALGVVINKPTDMTMQVLFDRIDLELEISPGLGSLEFGDPIAERP 128
Query: 185 LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
+ FGGP+ E G L +P + +V + + T + V E V + GP
Sbjct: 129 VMFGGPVQVERGFVLHAP------IKNYSSTLKVTDQIAMTTSKDV---LEEVAHGS-GP 178
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ GC GW QL EI W A P++I
Sbjct: 179 QRILVSLGCSGWSAGQLESEIVHNGWLTVAADPAII 214
>gi|433629124|ref|YP_007262752.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070010]
gi|432160717|emb|CCK58045.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070010]
Length = 202
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 76/193 (39%), Gaps = 19/193 (9%)
Query: 105 PQNSLGDKWAHTIHEPEKGCLLIA-TEKLDGVHIFERTVILILSMEPMGPSGIILNRPSL 163
P D A G LL+A T+ L+ F R+VI I+ G G++LNRPS
Sbjct: 4 PHEDPEDHVAPAAQRVRAGTLLLANTDLLEPT--FRRSVIYIVEHNDGGTLGVVLNRPSE 61
Query: 164 MSIKEMRSTVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEG 219
++ VL + +P +F GGP+ + L L + G D G G+
Sbjct: 62 TAVY----NVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRL 117
Query: 220 LYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIG 279
+ A +V E R + G GW QL EI W V + PS +
Sbjct: 118 VMVDLDADPEVLAAVV-------EGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDV- 169
Query: 280 LESGTLGLWEELL 292
L LW ++L
Sbjct: 170 LVGPRADLWGQVL 182
>gi|209518622|ref|ZP_03267440.1| protein of unknown function DUF179 [Burkholderia sp. H160]
gi|209500905|gb|EEA00943.1| protein of unknown function DUF179 [Burkholderia sp. H160]
Length = 192
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 12/145 (8%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPL--EE 193
F TV+ + G G+++NRP+ + ++ + R + P++FGGP+ E
Sbjct: 26 FSGTVVYLCDHSERGALGLVINRPTDIDLQALFNRIDLKLEIEPLLHVPVYFGGPVQTER 85
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
G L PK G V GL T + V A + GPE F G G
Sbjct: 86 GFVLHDPKDGSTYTSSM----SVPGGLEMTTSKDVLEAVA----SGTGPERFLLTLGHAG 137
Query: 254 WEKEQLNEEIRAGYWTVAACSPSVI 278
W QL +EI W P ++
Sbjct: 138 WGAGQLEDEISKNGWLTVEADPKIV 162
>gi|340621806|ref|YP_004740258.1| hypothetical protein Ccan_10350 [Capnocytophaga canimorsus Cc5]
gi|339902072|gb|AEK23151.1| UPF0301 protein [Capnocytophaga canimorsus Cc5]
Length = 169
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 32/170 (18%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEE-GL 195
IF R+V+ + G G +LN+PS + + D + ++ GGP+++ L
Sbjct: 6 IFSRSVVFLTDHGIEGTVGFVLNKPSEFYLDAFFDVIPD------NFRIYHGGPVQQDSL 59
Query: 196 FLVSPKGG--------GDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRF 247
+ + + G+ + G F+Q++E + G +T + +F
Sbjct: 60 YFIHSRPDIIEHSFHIGNGIYWGGNFKQIIEQINLGNLKT---------------NEIKF 104
Query: 248 FDGCCGWEKEQLNEEIRAGYWTVA-ACSPSVIGLESGTLGLWEELLWLMG 296
F G GW + QL E+ W ++ PS + L SG+ LW E + +G
Sbjct: 105 FLGYSGWAEGQLEAELDMNAWVISDDIVPSQLFL-SGSASLWRERIKTLG 153
>gi|229491232|ref|ZP_04385060.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|453068694|ref|ZP_21971968.1| hypothetical protein G418_08663 [Rhodococcus qingshengii BKS 20-40]
gi|229321970|gb|EEN87763.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|452765255|gb|EME23515.1| hypothetical protein G418_08663 [Rhodococcus qingshengii BKS 20-40]
Length = 201
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 17/186 (9%)
Query: 111 DKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMR 170
D+ A E G LL+++ L F RTVI ++ G G+++NRPS +++
Sbjct: 9 DRMAWIEPEVRPGSLLVSSTDLTE-PAFRRTVIYMIEHNDAGSLGVVVNRPSETAVQ--- 64
Query: 171 STVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE 226
VL + P L+ GGP+ + L L + G G +G+ + +
Sbjct: 65 -NVLPQWSPLTAHPSALYIGGPVKRDSALCLGIARNGARIDGVAGLRRVDGKVVMVDLDS 123
Query: 227 TVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLG 286
A +V E R F G GW QL+ E+ W V + PS + L +
Sbjct: 124 DPEVIAPLV-------EGIRIFAGYSGWTLGQLDSELEREDWMVISSLPSDV-LTPPRVD 175
Query: 287 LWEELL 292
+W +L
Sbjct: 176 VWARVL 181
>gi|398341063|ref|ZP_10525766.1| hypothetical protein LkirsB1_17853 [Leptospira kirschneri serovar
Bim str. 1051]
gi|418677871|ref|ZP_13239145.1| hypothetical protein LEP1GSC044_3738 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418685648|ref|ZP_13246823.1| hypothetical protein LEP1GSC064_1413 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|421089451|ref|ZP_15550260.1| hypothetical protein LEP1GSC131_1607 [Leptospira kirschneri str.
200802841]
gi|421131376|ref|ZP_15591558.1| hypothetical protein LEP1GSC018_0174 [Leptospira kirschneri str.
2008720114]
gi|400321061|gb|EJO68921.1| hypothetical protein LEP1GSC044_3738 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410001901|gb|EKO52429.1| hypothetical protein LEP1GSC131_1607 [Leptospira kirschneri str.
200802841]
gi|410357159|gb|EKP04426.1| hypothetical protein LEP1GSC018_0174 [Leptospira kirschneri str.
2008720114]
gi|410739752|gb|EKQ84475.1| hypothetical protein LEP1GSC064_1413 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
Length = 182
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G +LI+ + + F RTVIL++ + G G++LN+ SI E+ + D +
Sbjct: 7 GKILISNSSI-VMDYFNRTVILMVEHDHQGAFGLVLNKRQEASIGEVIQGIPDHVS--RN 63
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
++ GGP++ +S +++ + G+ +++ GLY + E++K ++
Sbjct: 64 LLIYSGGPVDPT--FISVLHEDNKISQPGI--EIIPGLYLA--RSFDTLLELLKSSS--- 114
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
F F G GW QL E+ W + S + L W+E L
Sbjct: 115 -KFHVFQGYSGWGAGQLETEMNRKSWVIHEASKDFV-LNQDPETTWQEAL 162
>gi|119470542|ref|ZP_01613245.1| conserved protein possibly involved in the control of
exopolysaccharide production [Alteromonadales bacterium
TW-7]
gi|119446243|gb|EAW27520.1| conserved protein possibly involved in the control of
exopolysaccharide production [Alteromonadales bacterium
TW-7]
Length = 185
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 16/164 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVL---DAAGTFSDRPLFFGGPL--E 192
F+R V I G G+++N+P +++ E+ + D + +F GGP+ +
Sbjct: 20 FKRAVTYICEHNEDGAMGLVINQPINVTVGELLDKIEIDNDKTQQAAKVAVFAGGPVKTD 79
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
G L SPK G K + + T + V + A PE F G
Sbjct: 80 RGFVLHSPKLGYTSSQK------LSSDIMITTSKDVLASL----TTAHAPEKFIITLGYA 129
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GWE+ QL +E+ W + P++I + WE+ + ++G
Sbjct: 130 GWEQGQLEQELLDNSWLIIEADPAII-FNTPAEKRWEKAVSMLG 172
>gi|383816967|ref|ZP_09972353.1| hypothetical protein SPM24T3_21464 [Serratia sp. M24T3]
gi|383294163|gb|EIC82511.1| hypothetical protein SPM24T3_21464 [Serratia sp. M24T3]
Length = 187
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 137 IFERTVILILSMEPMGPSGIILNR-------PSLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F+R+VI + G G+++N+ +++ E+ T D A DRP+F GG
Sbjct: 18 MFKRSVIYVCEHNDEGAMGLVINKLVDDFTIKNVLDKLEIEPTPRDPAINL-DRPVFSGG 76
Query: 190 PL--EEGLFLVSP-KGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFR 246
PL + G L +P KG G + S +Q M ET+G + P+D
Sbjct: 77 PLADDRGFILHTPRKGFGSSIQIS---DQTMITTSKDVLETLGTPDQ--------PKDVL 125
Query: 247 FFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G WE+ QL +E+ W + +I
Sbjct: 126 VALGYAAWEQGQLEQELLNNSWLTIEANSDII 157
>gi|384154677|ref|YP_005537493.1| hypothetical protein RAM_47855 [Amycolatopsis mediterranei S699]
gi|340532831|gb|AEK48036.1| hypothetical protein RAM_47855 [Amycolatopsis mediterranei S699]
Length = 172
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 67/165 (40%), Gaps = 20/165 (12%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRP--LFFGGPLEE-- 193
F RTV+ ++ G G++LNRPS +++ + VL G P +F GGP+E+
Sbjct: 6 FRRTVVFVIDHREEGTLGVVLNRPSDVAVHD----VLPNWGGHVAEPQAVFVGGPVEKKT 61
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPE--DFRFFDGC 251
L L + + G GV + V A+ P+ R F G
Sbjct: 62 ALCLAALRTGETAASVPGV---------IAVRGPVALVDLDTDPEALVPKVRGVRVFAGY 112
Query: 252 CGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GW QL EI W + PS I L S LW ++L G
Sbjct: 113 AGWNSGQLAGEIEREDWVIVPALPSDI-LASPDGDLWSQVLRRQG 156
>gi|297184865|gb|ADI20975.1| putative transcriptional regulator [uncultured gamma
proteobacterium EB080_L93H08]
Length = 140
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAAGTFS 181
G LLIA+ L+ + F +TV LI MG G+I+NRP+ SI+E+ + + L++ FS
Sbjct: 13 GQLLIASPNLNDPN-FYKTVTLICENNAMGSLGLIINRPATSSIEEIFNELDLNSVDHFS 71
Query: 182 DRPLFFGGPL-EEGLFLVSPKG 202
+ P+ GGP+ E F++ G
Sbjct: 72 NVPIMQGGPMGSERGFVIHKDG 93
>gi|433625130|ref|YP_007258759.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140060008]
gi|432152736|emb|CCK49942.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140060008]
Length = 202
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 77/197 (39%), Gaps = 27/197 (13%)
Query: 105 PQNSLGDKWAHTIHEPEKGCLLIA-TEKLDGVHIFERTVILILSMEPMGPSGIILNRPSL 163
P D A G LL+A T+ L+ F R+VI I+ G G++LNRPS
Sbjct: 4 PHEDPEDHVAPAAQRVRAGTLLVANTDLLEPT--FRRSVIYIVEHNDGGTLGVVLNRPSE 61
Query: 164 MSIKEMRSTVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEG 219
++ VL + +P +F GGP+ + L L + G D G G V
Sbjct: 62 TAVY----NVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPG-LRHVAGR 116
Query: 220 LYF----GTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
L E + A E V R + G GW QL EI W V + P
Sbjct: 117 LVMVDLDADPEVLAAAVEGV----------RIYAGYSGWTIGQLEGEIERDDWIVLSALP 166
Query: 276 SVIGLESGTLGLWEELL 292
S + L LW ++L
Sbjct: 167 SDV-LVGPRADLWGQVL 182
>gi|395495388|ref|ZP_10426967.1| hypothetical protein PPAM2_04946 [Pseudomonas sp. PAMC 25886]
Length = 189
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 138 FERTVILILSMEPMGPSGIILNRP---SLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEG 194
F +T+ I+ G G+++NRP +L I E +D + P++ GGP++
Sbjct: 25 FAQTLTYIVEHTANGAMGLVVNRPQDLNLADILEQLRPDIDPPASCQHVPIYIGGPVQTD 84
Query: 195 L-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
F++ P G + +EGL T + V A + +GP+ G G
Sbjct: 85 RGFVLHPTGPKFQATVD------LEGLSLSTSQDVLFAIA----DGIGPDQSVITLGYAG 134
Query: 254 WEKEQLNEEIRAGYW 268
WE QL E+ + W
Sbjct: 135 WEAGQLEAELASNAW 149
>gi|226951816|ref|ZP_03822280.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
gi|294649067|ref|ZP_06726512.1| DoxD-like family protein [Acinetobacter haemolyticus ATCC 19194]
gi|226837356|gb|EEH69739.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
gi|292825052|gb|EFF83810.1| DoxD-like family protein [Acinetobacter haemolyticus ATCC 19194]
Length = 184
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 65/157 (41%), Gaps = 14/157 (8%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
CL+ + D F TVI + + G GII+NRPS + IKE+ + + A
Sbjct: 10 CLIAPPDMAD--EFFANTVIYVARHDEDGAQGIIINRPSELQIKELLNDLEIDADNVQPH 67
Query: 184 PLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ GGPL E G L + G S + V E + T + + A + VG
Sbjct: 68 AVLQGGPLRPEAGFVLHT----GQPTWHSSI--AVGENVCITTSKDILDA--IAHNEGVG 119
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
++ G W K QL EE+ G W + +I
Sbjct: 120 R--YQIALGYASWAKNQLEEEMARGDWLICDSDMDLI 154
>gi|409392744|ref|ZP_11244284.1| hypothetical protein GORBP_103_00320 [Gordonia rubripertincta NBRC
101908]
gi|403197455|dbj|GAB87518.1| hypothetical protein GORBP_103_00320 [Gordonia rubripertincta NBRC
101908]
Length = 225
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 79/189 (41%), Gaps = 15/189 (7%)
Query: 114 AHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV 173
A H G LIA+ L F RTVI ++ G G+ILNR S ++ +
Sbjct: 36 ADPTHRVRPGTALIASTDL-IEPTFARTVIYVIEHNEAGSLGVILNRMSQTAVHNLLPQW 94
Query: 174 LDAAGTFSDRPLFFGGPLEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAA 232
D A S R L+ GGP+++ L + G +V V G V A
Sbjct: 95 TDIAA--SPRALYVGGPVKQDAALCLGVMKHGFDVDDHPALRPV-----DGRVVLVDLDA 147
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+ + V E R F G GW QL++E+ W +A+ P + L + +W ++L
Sbjct: 148 DPEPLSEVL-EGVRIFAGYSGWGIGQLDDELDQFSWMLASALPRDL-LAPPGVDVWFDIL 205
Query: 293 WLMGRRKVW 301
RR+ W
Sbjct: 206 ----RRQPW 210
>gi|392556588|ref|ZP_10303725.1| hypothetical protein PundN2_14228 [Pseudoalteromonas undina NCIMB
2128]
Length = 185
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 16/164 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGPL--E 192
F+R V I G G+++N+P +++ E+ + D + + ++ GGP+ +
Sbjct: 20 FKRAVTYICEHNEEGAMGLVINQPIDVTVGELLDKIDIDNDKSQHAAQVTVYAGGPVKTD 79
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
G L SPK G +++ + T + V A PE F G
Sbjct: 80 RGFVLHSPKPG------YSASQKLSSDIMITTSKDVLATL----TTAQAPEQFIITLGYS 129
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GWE+ QL +E+ W + P +I ++ WE + ++G
Sbjct: 130 GWEQGQLEQELLDNSWLIIKADPKII-FDTPVEKRWEMAVSMLG 172
>gi|108762655|ref|YP_630251.1| hypothetical protein MXAN_2022 [Myxococcus xanthus DK 1622]
gi|118574109|sp|Q1DAS2.1|Y2022_MYXXD RecName: Full=UPF0301 protein MXAN_2022
gi|108466535|gb|ABF91720.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 181
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 79/182 (43%), Gaps = 31/182 (17%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM-RSTVLDAAGTFSDR 183
LL+A +L G F R+V+L+L G G+++NR + +++ E+ R L A +
Sbjct: 8 LLLAMPQL-GDPNFYRSVVLMLEHSESGSMGLVINRGAPLTLGELARGQNLGIAAGRKEH 66
Query: 184 PLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
++ GGP+E G L + + V+ GL+ V +A+G
Sbjct: 67 SVYLGGPVEPQRGFVL-------HDDTEQREKHSVLPGLFLS-----------VTLDALG 108
Query: 242 P------EDFRFFDGCCGWEKEQLNEEIRAGYWTVA-ACSPSVIGLESGTLGLWEELLWL 294
P RF G GW QL EI AG W A + +V+G E LW+ L
Sbjct: 109 PLLTNPNPRLRFCLGYAGWGPRQLESEIAAGSWLFTEATAEAVLGHEPSK--LWDTTLRG 166
Query: 295 MG 296
MG
Sbjct: 167 MG 168
>gi|293394487|ref|ZP_06638783.1| alginate biosynthesis nucleoside diphosphate kinase regulator AlgH
[Serratia odorifera DSM 4582]
gi|291422952|gb|EFE96185.1| alginate biosynthesis nucleoside diphosphate kinase regulator AlgH
[Serratia odorifera DSM 4582]
Length = 187
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 23/148 (15%)
Query: 138 FERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGGP 190
F+R+VI I G G+++N+P S++S ++ D A D+P+F GGP
Sbjct: 19 FKRSVIYICEHNEEGAMGLVINKPVEQFTVESVLSKLQILPIERDPAVNL-DKPVFAGGP 77
Query: 191 L--EEGLFLVSP-KGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRF 247
L + G L +P G G + S + M ET+G + P+D
Sbjct: 78 LADDRGFILHTPCSGFGSSIQIS---PETMITTSKDVLETLGTPEQ--------PQDVLV 126
Query: 248 FDGCCGWEKEQLNEEIRAGYW-TVAACS 274
G GWEK QL +E+ W T+ A S
Sbjct: 127 ALGYAGWEKGQLEQEVLENVWLTIEADS 154
>gi|83814706|ref|YP_444640.1| hypothetical protein SRU_0495 [Salinibacter ruber DSM 13855]
gi|294506392|ref|YP_003570450.1| hypothetical protein SRM_00577 [Salinibacter ruber M8]
gi|118574366|sp|Q2S591.1|Y495_SALRD RecName: Full=UPF0301 protein SRU_0495
gi|83756100|gb|ABC44213.1| conserved hypothetical protein [Salinibacter ruber DSM 13855]
gi|294342720|emb|CBH23498.1| Conserved hypothetical protein containing DUF179 [Salinibacter
ruber M8]
Length = 188
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 23/179 (12%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LLI+ + + V+L + G G+ILNR +S+ + VLD T+ D
Sbjct: 12 GTLLISAPMMQDPNFRRSVVLLCEHNDREGTFGLILNRELDVSLGD----VLDEYVTY-D 66
Query: 183 RPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
PL+ GGP++ E L + + E + G+ T G E V++ A G
Sbjct: 67 PPLYMGGPVQRETLHYLHTR------------EDIPGGVALPGDMTWGGDFEAVQQLAKG 114
Query: 242 ----PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
P++ RFF G GW QL E+ W A + + ++ LW +L MG
Sbjct: 115 GDAAPDNLRFFLGYAGWGPGQLEGELGEEAWIPAPGAAEFV-FDTDPDQLWRAILRRMG 172
>gi|421098770|ref|ZP_15559433.1| hypothetical protein LEP1GSC125_2937 [Leptospira borgpetersenii
str. 200901122]
gi|410798254|gb|EKS00351.1| hypothetical protein LEP1GSC125_2937 [Leptospira borgpetersenii
str. 200901122]
Length = 182
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 76/176 (43%), Gaps = 14/176 (7%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ E G +LI+ + + F +TVIL++ + G G++LN+ SI ++ + D
Sbjct: 1 MEETYNGKILISNSSI-VMDYFNQTVILMVEHDNQGAFGLVLNKKQKASIGDVIQGIPDH 59
Query: 177 AGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
P++ GGP++ +S +++ + G+ +V+ GLY + E++K
Sbjct: 60 VS--RTLPIYSGGPVDPT--FISVLHEDNKIAQPGI--EVIPGLYLA--RSYDTLLELLK 111
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+ F + G GW QL E+ W + + L W+E L
Sbjct: 112 STS----KFHVYQGYSGWSAGQLETEMDRKSWVTHEATKDFV-LNQDPETTWQEAL 162
>gi|83754992|pdb|2EW0|A Chain A, X-Ray Crystal Structure Of Protein Q6ff54 From
Acinetobacter Sp. Adp1. Northeast Structural Genomics
Consortium Target Asr1
Length = 192
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 14/157 (8%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
CL+ E D F TVI + + G GII+NRP+ + IKE+ + + A +
Sbjct: 10 CLIAPPEXADD--FFANTVIYLARHDEEGAQGIIINRPAGIQIKELLNDLDIDADNVNPH 67
Query: 184 PLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ GGPL E G L + G S + V E + T + + A + VG
Sbjct: 68 EVLQGGPLRPEAGFVLHT----GQPTWHSSI--AVGENVCITTSKDILDA--IAHNEGVG 119
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
++ G W K QL +EI G W + +I
Sbjct: 120 R--YQIALGYASWGKNQLEDEIARGDWLICDADXDLI 154
>gi|152981307|ref|YP_001354640.1| transcriptional regulator [Janthinobacterium sp. Marseille]
gi|151281384|gb|ABR89794.1| transcriptional regulator [Janthinobacterium sp. Marseille]
Length = 221
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 80/193 (41%), Gaps = 29/193 (15%)
Query: 94 SVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGP 153
S+D AA + PP+ SL I P LD V F TV+ + G
Sbjct: 20 SLDFSAAPDTPPRESLNLADHFLIAMPSM---------LDPV--FGGTVVYLCEHNANGA 68
Query: 154 SGIILNRPSLMSIKEMRSTV---LDAAGTFS--DR-PLFFGGPLE--EGLFLVSPKGGGD 205
G+I+N+ + M++ + + + L+ A S DR P+ +GGP++ G L +P+G
Sbjct: 69 LGVIINKATDMTVDVLLNRIDLTLEIAPELSALDRAPVLYGGPVQADRGFVLHAPRGDFS 128
Query: 206 EVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRA 265
V E + T + + A + GP+ GC GW QL +EI
Sbjct: 129 ST------LPVTEEISLTTSKDILAAVAL----GSGPQRMLVSLGCAGWGAGQLEDEITR 178
Query: 266 GYWTVAACSPSVI 278
W P+V+
Sbjct: 179 NGWLTVRADPAVL 191
>gi|444376422|ref|ZP_21175666.1| UPF0301 protein YqgE [Enterovibrio sp. AK16]
gi|443679400|gb|ELT86056.1| UPF0301 protein YqgE [Enterovibrio sp. AK16]
Length = 191
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-----LDAAGTFS-DRPLFFGGPL 191
F+ +V+ + G G+++N+P +SI +M + D S D+P+ FGGP+
Sbjct: 23 FQHSVVYMCEHNEDGAMGLVINQPINISIAKMLDQIEVEREQDVTHPVSLDQPVLFGGPV 82
Query: 192 EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGC 251
E V K + G Q+ + L T + + + PE F G
Sbjct: 83 SEDRGFVLHKN----LKLYGSSIQLSDELTVTTSKDILSILGTTEE----PEQFIVALGY 134
Query: 252 CGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GW+ QL +E+ W P VI ++ WE+ L MG
Sbjct: 135 AGWDAGQLEQELAENSWLTIEADPKVI-FDTPINERWEKALKQMG 178
>gi|296136974|ref|YP_003644216.1| hypothetical protein Tint_2545 [Thiomonas intermedia K12]
gi|295797096|gb|ADG31886.1| protein of unknown function DUF179 [Thiomonas intermedia K12]
Length = 190
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 59/149 (39%), Gaps = 22/149 (14%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAAGTFSDRPLFFGGPLEEGLF 196
F TV+ + G G+I+NRPS +++KE+ V LD AG + +P+ GGP+
Sbjct: 26 FAGTVVYVCEHSARGALGLIINRPSDITVKELFERVGLDHAGLHASQPVLQGGPV----- 80
Query: 197 LVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV-------GPEDFRFFD 249
+ + V + + Y + + G ++ + GP
Sbjct: 81 ---------QTERGFVLHETTDTAYASSLDIPGGLQMTTSKDVLEHMAAGDGPTRSLITL 131
Query: 250 GCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW QL EE+ W P V+
Sbjct: 132 GYSGWSAGQLEEELGQNGWLTVEADPIVL 160
>gi|156502652|ref|YP_001428717.1| hypothetical protein FTA_1286 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|290952900|ref|ZP_06557521.1| hypothetical protein FtulhU_00215 [Francisella tularensis subsp.
holarctica URFT1]
gi|423050903|ref|YP_007009337.1| hypothetical protein F92_06740 [Francisella tularensis subsp.
holarctica F92]
gi|166200329|sp|A7NCQ8.1|Y1286_FRATF RecName: Full=UPF0301 protein FTA_1286
gi|156253255|gb|ABU61761.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|421951625|gb|AFX70874.1| hypothetical protein F92_06740 [Francisella tularensis subsp.
holarctica F92]
Length = 194
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LD 175
+++ K +L+AT + +F ++V+ + + G G+I+N+P ++K++ + +
Sbjct: 1 MYQNHKSEILLATPLIKDDIVFTKSVVYLCQNDRHGAMGLIINKPLADTLKDVFEELHIS 60
Query: 176 AAGTFS---DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAA 232
TF + PL+ GGP+ ++ G + + EGL ++
Sbjct: 61 HTNTFKEILEYPLYMGGPISPHKIMILHTTNGRNYTSTIKLD---EGL--AITASIDILE 115
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
++ N + PE F G W QL +EI++ W V
Sbjct: 116 DIA--NNILPEYFLPVVGYSCWTANQLTDEIKSNDWIVT 152
>gi|359446825|ref|ZP_09236464.1| UPF0301 protein PSHAa2600 [Pseudoalteromonas sp. BSi20439]
gi|358039297|dbj|GAA72713.1| UPF0301 protein PSHAa2600 [Pseudoalteromonas sp. BSi20439]
Length = 185
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 16/164 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGPL--E 192
F+R V I G G+++N+P +++ E+ + D + + ++ GGP+ +
Sbjct: 20 FKRAVTYICEHNEEGAMGLVINQPIDVTVGELLDKIDIDNDKSQQAAQVTVYAGGPVKTD 79
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
G L SPK G +++ + T + V A PE F G
Sbjct: 80 RGFVLHSPKPG------YSASQKLSSDIMITTSKDVLATL----TTAQAPEQFIITLGYS 129
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GWE+ QL +E+ W + P +I ++ WE + ++G
Sbjct: 130 GWEQGQLEQELLDNSWLIIKADPKII-FDTPVEKRWEMAVSMLG 172
>gi|441515867|ref|ZP_20997654.1| hypothetical protein GOAMI_60_00020 [Gordonia amicalis NBRC 100051]
gi|441449330|dbj|GAC55615.1| hypothetical protein GOAMI_60_00020 [Gordonia amicalis NBRC 100051]
Length = 197
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 76/189 (40%), Gaps = 15/189 (7%)
Query: 114 AHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV 173
A H G LIA+ L F RTVI ++ G G+ILNR S ++ +
Sbjct: 8 ADPTHRVRPGTALIASTDLIE-PTFARTVIYVIEHNEAGSLGVILNRMSQTAVHNLLPQW 66
Query: 174 LDAAGTFSDRPLFFGGPLEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAA 232
D A S R L+ GGP+++ L + G V V G V A
Sbjct: 67 TDIAA--SPRALYVGGPVKQDAALCLGVMKHGHHVEDHPALRPV-----DGRVVLVDLDA 119
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+ V E R F G GW QL++E+ W +A+ P + L +W ++L
Sbjct: 120 DPEPLAEVL-EGVRIFAGYSGWGIGQLDDELDQFSWILASALPRDL-LAPPATDVWFDIL 177
Query: 293 WLMGRRKVW 301
RR+ W
Sbjct: 178 ----RRQPW 182
>gi|402567410|ref|YP_006616755.1| hypothetical protein GEM_2662 [Burkholderia cepacia GG4]
gi|402248607|gb|AFQ49061.1| hypothetical protein GEM_2662 [Burkholderia cepacia GG4]
Length = 192
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 61/154 (39%), Gaps = 30/154 (19%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGPL--E 192
F TV+ + G G+++NRP+ + ++ + S + LD P++FGGP+ E
Sbjct: 26 FSGTVVYLCDHSERGALGLVINRPTDIDLESLFSRIDLKLDIEPLLH-IPVYFGGPVQTE 84
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV--------GPED 244
G L P +EG + + +V EM V GP+
Sbjct: 85 RGFVLHEP----------------VEGANYNSSMSVEGGLEMTTSKDVLEAVATGTGPKR 128
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
F G GW QL EEI W A P ++
Sbjct: 129 FLLTLGHAGWGAGQLEEEIARNGWLTVAADPRIV 162
>gi|293610121|ref|ZP_06692422.1| hypothetical protein HMPREF0013_02273 [Acinetobacter sp. SH024]
gi|375136848|ref|YP_004997498.1| putative transcriptional regulator [Acinetobacter calcoaceticus
PHEA-2]
gi|427422977|ref|ZP_18913143.1| hypothetical protein ACINWC136_0377 [Acinetobacter baumannii
WC-136]
gi|292827353|gb|EFF85717.1| hypothetical protein HMPREF0013_02273 [Acinetobacter sp. SH024]
gi|325124293|gb|ADY83816.1| putative transcriptional regulator [Acinetobacter calcoaceticus
PHEA-2]
gi|425700077|gb|EKU69668.1| hypothetical protein ACINWC136_0377 [Acinetobacter baumannii
WC-136]
Length = 184
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 66/157 (42%), Gaps = 14/157 (8%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
CL+ E D F TVI + + G GII+NRPS + IKE+ + + A +
Sbjct: 10 CLIAPPEMADD--FFANTVIYLARHDEEGAQGIIINRPSGIQIKELLNDLDIEADNVNPH 67
Query: 184 PLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ GGPL E G L + G S + V E + T + + A + VG
Sbjct: 68 VVLQGGPLRPEAGFVLHT----GQPTWHSSI--AVGENVCITTSKDILDA--IAHNEGVG 119
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
++ G W K QL +EI G W + +I
Sbjct: 120 R--YQIALGYASWGKNQLEDEITRGDWLICDADMDLI 154
>gi|377821539|ref|YP_004977910.1| hypothetical protein BYI23_A020950 [Burkholderia sp. YI23]
gi|357936374|gb|AET89933.1| hypothetical protein BYI23_A020950 [Burkholderia sp. YI23]
Length = 192
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 10/144 (6%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPLE-EG 194
F TV+ + G G+++NRP+ + ++ + R + P++FGGP++ E
Sbjct: 26 FSGTVVYLCDHTEKGALGLVINRPTDIDLQSLFNRIDLKLEIEPLVHLPVYFGGPVQTER 85
Query: 195 LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGW 254
F++ G G+ S V GL T + V A K GPE F G GW
Sbjct: 86 GFVLHEAGEGEPYSSS---MSVPGGLAMTTSKDVLEAVASGK----GPERFLLTLGHAGW 138
Query: 255 EKEQLNEEIRAGYWTVAACSPSVI 278
QL EEI W P +I
Sbjct: 139 GAGQLEEEISKNGWLTVEADPRII 162
>gi|302531328|ref|ZP_07283670.1| UPF0301 protein [Streptomyces sp. AA4]
gi|302440223|gb|EFL12039.1| UPF0301 protein [Streptomyces sp. AA4]
Length = 193
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 76/184 (41%), Gaps = 21/184 (11%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
E E G LL+A + + F+RTV+ ++ G G++LNRPS + + + VL G
Sbjct: 9 EVEPGTLLVAAPTMFDPN-FKRTVVFVIDHRAEGTLGVVLNRPSDVPVND----VLPGWG 63
Query: 179 TFSDRP--LFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
P +F GGP+++ L L + + G GV + V
Sbjct: 64 AHVAEPQSVFVGGPVDKKTALCLAALRTGETASSVPGV---------VAVRGPVALVDLD 114
Query: 235 VKRNAVGPE--DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+ P+ R F G GW+ QL EI W + PS I L + LW ++L
Sbjct: 115 SDPEVLVPKVRGVRVFAGYAGWDSGQLAGEIEREDWVIVPALPSDI-LAPPSRDLWGQVL 173
Query: 293 WLMG 296
G
Sbjct: 174 RRQG 177
>gi|413958751|ref|ZP_11397990.1| hypothetical protein BURK_002450 [Burkholderia sp. SJ98]
gi|413941331|gb|EKS73291.1| hypothetical protein BURK_002450 [Burkholderia sp. SJ98]
Length = 192
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 10/144 (6%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPLE-EG 194
F TV+ + G G+++NRP+ + ++ + R + P++FGGP++ E
Sbjct: 26 FSGTVVYLCDHTEKGALGLVINRPTDIDLQSLFNRIDLKLEIEPLVHLPVYFGGPVQTER 85
Query: 195 LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGW 254
F++ G G+ S V GL T + V A K GPE F G GW
Sbjct: 86 GFVLHEAGEGEPYSSS---MSVPGGLAMTTSKDVLEAVASGK----GPERFLLTLGHAGW 138
Query: 255 EKEQLNEEIRAGYWTVAACSPSVI 278
QL EEI W P +I
Sbjct: 139 GAGQLEEEISKNGWLTVEADPRII 162
>gi|381196833|ref|ZP_09904174.1| hypothetical protein AlwoW_06120 [Acinetobacter lwoffii WJ10621]
gi|381196858|ref|ZP_09904199.1| hypothetical protein AlwoW_06245 [Acinetobacter lwoffii WJ10621]
gi|381196883|ref|ZP_09904224.1| hypothetical protein AlwoW_06370 [Acinetobacter lwoffii WJ10621]
gi|381196908|ref|ZP_09904249.1| hypothetical protein AlwoW_06495 [Acinetobacter lwoffii WJ10621]
Length = 184
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 14/157 (8%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
CL+ + D F TVI + + G GII+NRPS +S+KE+ + + A
Sbjct: 10 CLIAPPDMADD--FFANTVIYLARHDEEGAQGIIINRPSGLSVKELLNDLEIEADHVRPH 67
Query: 184 PLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ GGPL E G L + G S + V E + T + + A + VG
Sbjct: 68 DVLQGGPLRPEAGFVLHT----GQPTWHSSI--AVGENICITTSKDILDA--IAHNEGVG 119
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
++ G W K QL +E+ G W V +I
Sbjct: 120 R--YQIALGYASWTKNQLEDELARGDWLVCDADMDLI 154
>gi|90023277|ref|YP_529104.1| argininosuccinate lyase [Saccharophagus degradans 2-40]
gi|119391977|sp|Q21EI7.1|Y3637_SACD2 RecName: Full=UPF0301 protein Sde_3637
gi|89952877|gb|ABD82892.1| protein of unknown function DUF179 [Saccharophagus degradans 2-40]
Length = 203
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 69/177 (38%), Gaps = 26/177 (14%)
Query: 115 HTIHEPE--------KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSI 166
H H PE + LIA L IF R++ I G GI++N+P +++
Sbjct: 10 HDNHAPEAAGEFVSLRDHFLIAMPGLQDP-IFSRSLTYICDHTAQGAMGIVVNQPMNLTL 68
Query: 167 KEMRSTV-LDAAGTFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFG 223
++ + L + R + GGP+ E G L SG +E M +
Sbjct: 69 GDIFEQLELQDKAQQAGRAVLAGGPVNTERGFVLHR---------DSGAWESTM---HIA 116
Query: 224 TKETVGCAAEMVKR--NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ + ++V N GP+ F G GW QL EEI A W S+I
Sbjct: 117 PDVNLTASRDIVHAIANNTGPKSSLFALGYAGWSAGQLEEEISANSWLTIPADSSII 173
>gi|297194090|ref|ZP_06911488.1| UPF0301 protein [Streptomyces pristinaespiralis ATCC 25486]
gi|197720927|gb|EDY64835.1| UPF0301 protein [Streptomyces pristinaespiralis ATCC 25486]
Length = 189
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 19/157 (12%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+A L + F+R V+L+L + G G+ILNRP+ + +++ +L++ +
Sbjct: 12 GRLLVAAPALADPN-FDRAVVLLLDHDDEGSLGVILNRPTPVVVED----ILESWAALAG 66
Query: 183 RP--LFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
P +F GGP L+ L + G +G V+ + E +G A
Sbjct: 67 EPGVVFQGGPVALDSALGVAVIPGDEGPLGWRRVYGAIGLVDLEAPPELLGGAL------ 120
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
R F G GW QL +E++ G W V P
Sbjct: 121 ----GSLRIFAGYAGWGPGQLEDELQDGAWYVVESEP 153
>gi|359438437|ref|ZP_09228457.1| UPF0301 protein PSHAa2600 [Pseudoalteromonas sp. BSi20311]
gi|358026852|dbj|GAA64706.1| UPF0301 protein PSHAa2600 [Pseudoalteromonas sp. BSi20311]
Length = 185
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 16/164 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGPL--E 192
F+R V I G G+++N+P +++ E+ + D + + ++ GGP+ +
Sbjct: 20 FKRAVTYICEHNEEGAMGLVINQPIDVTVGELLDKIDIDNDKSQHAAQVTVYAGGPVKTD 79
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
G L SPK G +++ + T + V A PE F G
Sbjct: 80 RGFVLHSPKPG------YSASQKLSSDIMITTSKDVLATL----TTAQAPEQFIITLGYS 129
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GWE+ QL +E+ W + P +I ++ WE + ++G
Sbjct: 130 GWEQGQLEQELLDNSWLIIKADPKII-FDTPVEKRWEMAVSMLG 172
>gi|456385036|gb|EMF50614.1| hypothetical protein SBD_8178 [Streptomyces bottropensis ATCC
25435]
Length = 190
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + ++ + AG
Sbjct: 9 GRLLVATPALADPN-FDRAVVLLLDHDEKGSLGVVLNRPTPVGVGDILVDWAELAGEPGV 67
Query: 183 RPLFFGGPLEEGLFL---VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+F GGP++ L V P GG + G + +V + E A + +A
Sbjct: 68 --VFQGGPVQLDSALGVGVIPGGGSVDRTPLG-WRRVHGAIGLVDLE----APPELLASA 120
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
+G R F G GW QL +E+ G W V P
Sbjct: 121 LG--SLRIFAGYAGWGPGQLEDELAEGAWYVVESEP 154
>gi|415983396|ref|ZP_11559406.1| hypothetical protein GGI1_12133 [Acidithiobacillus sp. GGI-221]
gi|339834546|gb|EGQ62307.1| hypothetical protein GGI1_12133 [Acidithiobacillus sp. GGI-221]
Length = 174
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKE-MRSTVLDAAGTFSDRPLFFGGPL--EE 193
+F+RTVI++ G G+++NR +++ + +R+ + + RP+++GGP+ +
Sbjct: 10 VFDRTVIVVCEHNAEGAMGVVINRLVDINMSDALRAVDIQPSEEMIHRPVYWGGPIQPQH 69
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFF--DGC 251
G L SP+G + + L + + ++++ A E R+ G
Sbjct: 70 GFILHSPRG------------EWLSSLEVNDDLALTSSPDILQAIAQHEEPQRYLLALGY 117
Query: 252 CGWEKEQLNEEIRAGYWTVAACSPSVI 278
GW +QL E++ W +VI
Sbjct: 118 AGWGAQQLEAELQDNAWLHGPLDMAVI 144
>gi|423694076|ref|ZP_17668596.1| PF02622 family protein [Pseudomonas fluorescens SS101]
gi|388000217|gb|EIK61546.1| PF02622 family protein [Pseudomonas fluorescens SS101]
Length = 189
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 138 FERTVILILSMEPMGPSGIILNRP---SLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEG 194
F +T+ I+ G G+++NRP +L I E +D + P++ GGP++
Sbjct: 25 FAQTLTYIVEHTANGAMGLVVNRPQELNLADILEQLRPEIDPPASCLHVPIYIGGPVQTD 84
Query: 195 L-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
F++ P G + +EG+ T + V A + VGPE G G
Sbjct: 85 RGFVLHPTGPKFQATVD------LEGVSLSTSQDVLFAIA----DGVGPEQSVITLGYAG 134
Query: 254 WEKEQLNEEIRAGYW 268
WE QL E+ + W
Sbjct: 135 WEAGQLEAELASNAW 149
>gi|343518135|ref|ZP_08755129.1| hypothetical protein HMPREF9952_0200 [Haemophilus pittmaniae HK 85]
gi|343393931|gb|EGV06481.1| hypothetical protein HMPREF9952_0200 [Haemophilus pittmaniae HK 85]
Length = 190
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 29/171 (16%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAAGT- 179
+G LLIA + FE+ VILI G G+++N P+ +SI E+ S + L +
Sbjct: 4 QGQLLIAMPHVKDY--FEQAVILICEHNAQGAMGVMINYPTDLSIAELYSKLNLMSINNR 61
Query: 180 -FSDRP-----LFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQ---VMEGLYFGTKETVG 229
FS R + GGP+ E F+V K + FE + + L+ T
Sbjct: 62 QFSQRHVTGTLVLTGGPVHSERGFIVHTKSKTE-------FEHSYPISDNLWLTT----- 109
Query: 230 CAAEMVKR--NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+A+++ ++ PE++ GC W QL +EI W VA + ++
Sbjct: 110 -SADIINTFGSSDAPENYLVALGCANWAPGQLEQEIADNVWLVAPSNNYIL 159
>gi|15607180|ref|NP_214552.1| Conserved protein [Mycobacterium tuberculosis H37Rv]
gi|15839415|ref|NP_334452.1| hypothetical protein MT0043 [Mycobacterium tuberculosis CDC1551]
gi|31791215|ref|NP_853708.1| hypothetical protein Mb0039 [Mycobacterium bovis AF2122/97]
gi|121635948|ref|YP_976171.1| hypothetical protein BCG_0069 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148659798|ref|YP_001281321.1| hypothetical protein MRA_0041 [Mycobacterium tuberculosis H37Ra]
gi|148821228|ref|YP_001285982.1| hypothetical protein TBFG_10037 [Mycobacterium tuberculosis F11]
gi|167970564|ref|ZP_02552841.1| hypothetical protein MtubH3_22023 [Mycobacterium tuberculosis
H37Ra]
gi|224988421|ref|YP_002643088.1| hypothetical protein JTY_0039 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253796953|ref|YP_003029954.1| hypothetical protein TBMG_00037 [Mycobacterium tuberculosis KZN
1435]
gi|254233438|ref|ZP_04926764.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|254366497|ref|ZP_04982541.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|254548971|ref|ZP_05139418.1| hypothetical protein Mtube_00646 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|289445564|ref|ZP_06435308.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289567924|ref|ZP_06448151.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289572614|ref|ZP_06452841.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289747807|ref|ZP_06507185.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289748503|ref|ZP_06507881.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289756097|ref|ZP_06515475.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289760135|ref|ZP_06519513.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289764152|ref|ZP_06523530.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|294995652|ref|ZP_06801343.1| hypothetical protein Mtub2_14388 [Mycobacterium tuberculosis 210]
gi|297632509|ref|ZP_06950289.1| hypothetical protein MtubK4_00205 [Mycobacterium tuberculosis KZN
4207]
gi|297729480|ref|ZP_06958598.1| hypothetical protein MtubKR_00215 [Mycobacterium tuberculosis KZN
R506]
gi|306778329|ref|ZP_07416666.1| hypothetical protein TMAG_00708 [Mycobacterium tuberculosis
SUMu001]
gi|306778859|ref|ZP_07417196.1| hypothetical protein TMBG_02502 [Mycobacterium tuberculosis
SUMu002]
gi|306782649|ref|ZP_07420971.1| hypothetical protein TMCG_03750 [Mycobacterium tuberculosis
SUMu003]
gi|306787015|ref|ZP_07425337.1| hypothetical protein TMDG_01921 [Mycobacterium tuberculosis
SUMu004]
gi|306791573|ref|ZP_07429875.1| hypothetical protein TMEG_00461 [Mycobacterium tuberculosis
SUMu005]
gi|306795636|ref|ZP_07433938.1| hypothetical protein TMFG_02200 [Mycobacterium tuberculosis
SUMu006]
gi|306801611|ref|ZP_07438279.1| hypothetical protein TMHG_03034 [Mycobacterium tuberculosis
SUMu008]
gi|306805819|ref|ZP_07442487.1| hypothetical protein TMGG_01508 [Mycobacterium tuberculosis
SUMu007]
gi|307082498|ref|ZP_07491611.1| hypothetical protein TMLG_00770 [Mycobacterium tuberculosis
SUMu012]
gi|313656809|ref|ZP_07813689.1| hypothetical protein MtubKV_00215 [Mycobacterium tuberculosis KZN
V2475]
gi|339630121|ref|YP_004721763.1| hypothetical protein MAF_00380 [Mycobacterium africanum GM041182]
gi|340625071|ref|YP_004743523.1| hypothetical protein MCAN_00371 [Mycobacterium canettii CIPT
140010059]
gi|378769781|ref|YP_005169514.1| hypothetical protein BCGMEX_0039 [Mycobacterium bovis BCG str.
Mexico]
gi|383305977|ref|YP_005358788.1| hypothetical protein MRGA327_00240 [Mycobacterium tuberculosis
RGTB327]
gi|385989570|ref|YP_005907868.1| hypothetical protein [Mycobacterium tuberculosis CCDC5180]
gi|385993161|ref|YP_005911459.1| hypothetical protein [Mycobacterium tuberculosis CCDC5079]
gi|385996809|ref|YP_005915107.1| hypothetical protein MTCTRI2_0040 [Mycobacterium tuberculosis
CTRI-2]
gi|392384758|ref|YP_005306387.1| unnamed protein product [Mycobacterium tuberculosis UT205]
gi|397671818|ref|YP_006513352.1| transcriptional regulator [Mycobacterium tuberculosis H37Rv]
gi|422815217|ref|ZP_16863435.1| hypothetical protein TMMG_00457 [Mycobacterium tuberculosis
CDC1551A]
gi|424806523|ref|ZP_18231954.1| hypothetical protein TBPG_03764 [Mycobacterium tuberculosis W-148]
gi|424945835|ref|ZP_18361531.1| hypothetical protein NCGM2209_0443 [Mycobacterium tuberculosis
NCGM2209]
gi|433633051|ref|YP_007266678.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070017]
gi|449062017|ref|YP_007429100.1| hypothetical protein K60_000420 [Mycobacterium bovis BCG str. Korea
1168P]
gi|54039888|sp|P67758.1|Y039_MYCBO RecName: Full=UPF0301 protein Mb0039
gi|54042804|sp|P67757.1|Y038_MYCTU RecName: Full=UPF0301 protein Rv0038/MT0043
gi|166227779|sp|A5TYA9.1|Y041_MYCTA RecName: Full=UPF0301 protein MRA_0041
gi|166227793|sp|A1KEK6.1|Y069_MYCBP RecName: Full=UPF0301 protein BCG_0069
gi|254799465|sp|C1AJ35.1|Y039_MYCBT RecName: Full=UPF0301 protein JTY_0039
gi|13879086|gb|AAK44266.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
gi|31616800|emb|CAD92901.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|121491595|emb|CAL70053.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124603231|gb|EAY61506.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|134152009|gb|EBA44054.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|148503950|gb|ABQ71759.1| putative transcriptional regulatory protein [Mycobacterium
tuberculosis H37Ra]
gi|148719755|gb|ABR04380.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
gi|224771534|dbj|BAH24340.1| hypothetical protein JTY_0039 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253318456|gb|ACT23059.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|289418522|gb|EFD15723.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289537045|gb|EFD41623.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289541677|gb|EFD45326.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289688335|gb|EFD55823.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289689090|gb|EFD56519.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289696684|gb|EFD64113.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289711658|gb|EFD75674.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|289715699|gb|EFD79711.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|308213472|gb|EFO72871.1| hypothetical protein TMAG_00708 [Mycobacterium tuberculosis
SUMu001]
gi|308328190|gb|EFP17041.1| hypothetical protein TMBG_02502 [Mycobacterium tuberculosis
SUMu002]
gi|308332495|gb|EFP21346.1| hypothetical protein TMCG_03750 [Mycobacterium tuberculosis
SUMu003]
gi|308336307|gb|EFP25158.1| hypothetical protein TMDG_01921 [Mycobacterium tuberculosis
SUMu004]
gi|308339910|gb|EFP28761.1| hypothetical protein TMEG_00461 [Mycobacterium tuberculosis
SUMu005]
gi|308343926|gb|EFP32777.1| hypothetical protein TMFG_02200 [Mycobacterium tuberculosis
SUMu006]
gi|308347710|gb|EFP36561.1| hypothetical protein TMGG_01508 [Mycobacterium tuberculosis
SUMu007]
gi|308351626|gb|EFP40477.1| hypothetical protein TMHG_03034 [Mycobacterium tuberculosis
SUMu008]
gi|308367788|gb|EFP56639.1| hypothetical protein TMLG_00770 [Mycobacterium tuberculosis
SUMu012]
gi|323717377|gb|EGB26582.1| hypothetical protein TMMG_00457 [Mycobacterium tuberculosis
CDC1551A]
gi|326905799|gb|EGE52732.1| hypothetical protein TBPG_03764 [Mycobacterium tuberculosis W-148]
gi|339293115|gb|AEJ45226.1| hypothetical protein CCDC5079_0036 [Mycobacterium tuberculosis
CCDC5079]
gi|339296763|gb|AEJ48873.1| hypothetical protein CCDC5180_0036 [Mycobacterium tuberculosis
CCDC5180]
gi|339329477|emb|CCC25112.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
gi|340003261|emb|CCC42378.1| conserved hypothetical protein [Mycobacterium canettii CIPT
140010059]
gi|341599964|emb|CCC62632.1| conserved hypothetical protein [Mycobacterium bovis BCG str. Moreau
RDJ]
gi|344217855|gb|AEM98485.1| hypothetical protein MTCTRI2_0040 [Mycobacterium tuberculosis
CTRI-2]
gi|356592102|gb|AET17331.1| Hypothetical protein BCGMEX_0039 [Mycobacterium bovis BCG str.
Mexico]
gi|358230350|dbj|GAA43842.1| hypothetical protein NCGM2209_0443 [Mycobacterium tuberculosis
NCGM2209]
gi|378543309|emb|CCE35580.1| unnamed protein product [Mycobacterium tuberculosis UT205]
gi|379026130|dbj|BAL63863.1| hypothetical protein ERDMAN_0046 [Mycobacterium tuberculosis str.
Erdman = ATCC 35801]
gi|380719930|gb|AFE15039.1| hypothetical protein MRGA327_00240 [Mycobacterium tuberculosis
RGTB327]
gi|395136722|gb|AFN47881.1| transcriptional regulator [Mycobacterium tuberculosis H37Rv]
gi|432164644|emb|CCK62106.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070017]
gi|440579484|emb|CCG09887.1| hypothetical protein MT7199_0038 [Mycobacterium tuberculosis
7199-99]
gi|444893507|emb|CCP42760.1| Conserved protein [Mycobacterium tuberculosis H37Rv]
gi|449030525|gb|AGE65952.1| hypothetical protein K60_000420 [Mycobacterium bovis BCG str. Korea
1168P]
Length = 202
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 77/197 (39%), Gaps = 27/197 (13%)
Query: 105 PQNSLGDKWAHTIHEPEKGCLLIA-TEKLDGVHIFERTVILILSMEPMGPSGIILNRPSL 163
P D A G LL+A T+ L+ F R+VI I+ G G++LNRPS
Sbjct: 4 PHEDPEDHVAPAAQRVRAGTLLLANTDLLEPT--FRRSVIYIVEHNDGGTLGVVLNRPSE 61
Query: 164 MSIKEMRSTVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEG 219
++ VL + +P +F GGP+ + L L + G D G G V
Sbjct: 62 TAVY----NVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPG-LRHVAGR 116
Query: 220 LYF----GTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
L E + A E V R + G GW QL EI W V + P
Sbjct: 117 LVMVDLDADPEVLAAAVEGV----------RIYAGYSGWTIGQLEGEIERDDWIVLSALP 166
Query: 276 SVIGLESGTLGLWEELL 292
S + L LW ++L
Sbjct: 167 SDV-LVGPRADLWGQVL 182
>gi|187931685|ref|YP_001891669.1| hypothetical protein FTM_0963 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|226696050|sp|B2SGN2.1|Y963_FRATM RecName: Full=UPF0301 protein FTM_0963
gi|187712594|gb|ACD30891.1| conserved hypothetical protein [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 194
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LD 175
+++ K +L+AT + +F ++V+ + + G G+I+N+P ++K++ + +
Sbjct: 1 MYQNHKNEILLATPLIKDDIVFTKSVVYLCQNDRHGAMGLIINKPLADTLKDVFEELHIP 60
Query: 176 AAGTFS---DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAA 232
TF + PL+ GGP+ ++ G + + EGL ++
Sbjct: 61 HTNTFKEILEYPLYMGGPISPHKIMILHTTNGRNYTSTIKLD---EGL--AITASIDILE 115
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
++ N + PE F G W QL +EI++ W V
Sbjct: 116 DIA--NNILPEYFLPVVGYSCWTANQLTDEIKSNDWIVT 152
>gi|206561486|ref|YP_002232251.1| hypothetical protein BCAL3142 [Burkholderia cenocepacia J2315]
gi|421867408|ref|ZP_16299067.1| UPF0301 protein YqgE [Burkholderia cenocepacia H111]
gi|444365366|ref|ZP_21165535.1| hypothetical protein BURCENBC7_0925 [Burkholderia cenocepacia BC7]
gi|444368971|ref|ZP_21168755.1| hypothetical protein BURCENK562V_0345 [Burkholderia cenocepacia
K56-2Valvano]
gi|226703697|sp|B4ECT3.1|Y3087_BURCJ RecName: Full=UPF0301 protein BceJ2315_30870
gi|198037528|emb|CAR53465.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
gi|358072822|emb|CCE49945.1| UPF0301 protein YqgE [Burkholderia cenocepacia H111]
gi|443590932|gb|ELT59872.1| hypothetical protein BURCENBC7_0925 [Burkholderia cenocepacia BC7]
gi|443599907|gb|ELT68148.1| hypothetical protein BURCENK562V_0345 [Burkholderia cenocepacia
K56-2Valvano]
Length = 192
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 30/154 (19%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGPL--E 192
F TV+ + G G+++NRP+ + ++ + + + LD P++FGGP+ E
Sbjct: 26 FSGTVVYLCDHSERGALGLVINRPTDIDLESLFNRIDLKLDIEPLLH-IPVYFGGPVQTE 84
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV--------GPED 244
G L P +EG + + +V EM V GP+
Sbjct: 85 RGFVLHEP----------------VEGASYNSSMSVDGGLEMTTSKDVLEAVATGTGPKR 128
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
F G GW QL EEI W A P ++
Sbjct: 129 FLLTLGHAGWGAGQLEEEISRNGWLTVAADPRIV 162
>gi|418720516|ref|ZP_13279714.1| hypothetical protein LEP1GSC101_3358 [Leptospira borgpetersenii
str. UI 09149]
gi|418735462|ref|ZP_13291873.1| hypothetical protein LEP1GSC121_3998 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|421095511|ref|ZP_15556224.1| hypothetical protein LEP1GSC128_3066 [Leptospira borgpetersenii
str. 200801926]
gi|410362221|gb|EKP13261.1| hypothetical protein LEP1GSC128_3066 [Leptospira borgpetersenii
str. 200801926]
gi|410743494|gb|EKQ92237.1| hypothetical protein LEP1GSC101_3358 [Leptospira borgpetersenii
str. UI 09149]
gi|410749083|gb|EKR01976.1| hypothetical protein LEP1GSC121_3998 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
Length = 182
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 76/176 (43%), Gaps = 14/176 (7%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ E G +LI+ + + F +TVIL++ + G G++LN+ I ++ + D
Sbjct: 1 MEETYNGKILISNSSI-VMDYFNQTVILMVEHDNQGAFGLVLNKKQKAFIGDVIQGIPDH 59
Query: 177 AGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
P++ GGP++ +S +++ + G+ +V+ GLY + E++K
Sbjct: 60 VS--HTLPIYSGGPVDPT--FISVLHEDNKISQPGI--EVIPGLYLA--RSYDTLLELLK 111
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+ F + G GW QL E+ W V + + L W+E L
Sbjct: 112 STS----KFHVYQGYSGWSAGQLETEMNRKSWVVHEATKDFV-LNQDPETTWQEAL 162
>gi|237808012|ref|YP_002892452.1| hypothetical protein Tola_1249 [Tolumonas auensis DSM 9187]
gi|237500273|gb|ACQ92866.1| protein of unknown function DUF179 [Tolumonas auensis DSM 9187]
Length = 185
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 15/161 (9%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVL--DAAGT 179
+ L+A L+ +FER++I + G GI+LN + + ++ + + + A
Sbjct: 6 QNYFLVAMPTLND-SLFERSIIYLCEHNEKGAMGIVLNVELDIDLCQLLTQMKLGNTAFP 64
Query: 180 FSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
S +P+ GGP+ + G L +P G + +++M T+G +AE
Sbjct: 65 LSGKPVLSGGPVNTDRGFVLHTPMDGFH--ASQSITDELMMTTSLDILSTLGTSAE---- 118
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
P+ + G GWE+ QL +E+ W S +I
Sbjct: 119 ----PKQYLIALGYAGWEEGQLEQELLDNTWLTIPASSEII 155
>gi|456887506|gb|EMF98548.1| hypothetical protein LEP1GSC123_4396, partial [Leptospira
borgpetersenii str. 200701203]
Length = 181
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 76/176 (43%), Gaps = 14/176 (7%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ E G +LI+ + + F +TVIL++ + G G++LN+ I ++ + D
Sbjct: 1 MEETYNGKILISNSSI-VMDYFNQTVILMVEHDNQGAFGLVLNKKQKAFIGDVIQGIPDH 59
Query: 177 AGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
P++ GGP++ +S +++ + G+ +V+ GLY + E++K
Sbjct: 60 VS--HTLPIYSGGPVDPT--FISVLHEDNKISQPGI--EVIPGLYLA--RSYDTLLELLK 111
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+ F + G GW QL E+ W V + + L W+E L
Sbjct: 112 STS----KFHVYQGYSGWSAGQLETEMNRKSWVVHEATKDFV-LNQDPETTWQEAL 162
>gi|297626165|ref|YP_003687928.1| hypothetical protein PFREUD_09650 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296921930|emb|CBL56490.1| Hypothetical protein PFREUD_09650 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 188
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 79/190 (41%), Gaps = 37/190 (19%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P G LL+++E G F++ VI +L + G G+ LN+PS + E VL A
Sbjct: 7 PHAGELLVSSEAAGG-GFFDQAVIFLLDNDENGAIGVALNKPSTTPVAE----VLPAWAG 61
Query: 180 FSDRP--LFFGGPLEEGLFLVSPKG----------GGDEVGKSGVFEQVMEGLYFGTKET 227
+ P LF GGP V+P G G + G V V L+ T
Sbjct: 62 ELNPPSVLFAGGP-------VAPNGAICLAKVMDSGEEPPGWRPVLGDVGL-LHLDTPVE 113
Query: 228 VGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA-ACSPSVIGLESGTLG 286
+ A D R F G GW+ QL++E+ G W A A V G ++ G
Sbjct: 114 IAAGAY---------SDVRVFAGYSGWDPGQLSDELDRGVWLRAPARDEDVFGAQA--EG 162
Query: 287 LWEELLWLMG 296
LW +L +G
Sbjct: 163 LWRRVLRRVG 172
>gi|298527436|ref|ZP_07014845.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308378527|ref|ZP_07482878.2| hypothetical protein TMIG_00318 [Mycobacterium tuberculosis
SUMu009]
gi|308379678|ref|ZP_07487111.2| hypothetical protein TMJG_01218 [Mycobacterium tuberculosis
SUMu010]
gi|308380878|ref|ZP_07491328.2| hypothetical protein TMKG_01216 [Mycobacterium tuberculosis
SUMu011]
gi|375294238|ref|YP_005098505.1| hypothetical protein TBSG_00037 [Mycobacterium tuberculosis KZN
4207]
gi|392430447|ref|YP_006471491.1| hypothetical protein TBXG_000037 [Mycobacterium tuberculosis KZN
605]
gi|298497230|gb|EFI32524.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308352334|gb|EFP41185.1| hypothetical protein TMIG_00318 [Mycobacterium tuberculosis
SUMu009]
gi|308356233|gb|EFP45084.1| hypothetical protein TMJG_01218 [Mycobacterium tuberculosis
SUMu010]
gi|308360224|gb|EFP49075.1| hypothetical protein TMKG_01216 [Mycobacterium tuberculosis
SUMu011]
gi|328456743|gb|AEB02166.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
gi|392051856|gb|AFM47414.1| hypothetical protein TBXG_000037 [Mycobacterium tuberculosis KZN
605]
Length = 201
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 77/197 (39%), Gaps = 27/197 (13%)
Query: 105 PQNSLGDKWAHTIHEPEKGCLLIA-TEKLDGVHIFERTVILILSMEPMGPSGIILNRPSL 163
P D A G LL+A T+ L+ F R+VI I+ G G++LNRPS
Sbjct: 3 PHEDPEDHVAPAAQRVRAGTLLLANTDLLEPT--FRRSVIYIVEHNDGGTLGVVLNRPSE 60
Query: 164 MSIKEMRSTVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEG 219
++ VL + +P +F GGP+ + L L + G D G G V
Sbjct: 61 TAVY----NVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPG-LRHVAGR 115
Query: 220 LYF----GTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
L E + A E V R + G GW QL EI W V + P
Sbjct: 116 LVMVDLDADPEVLAAAVEGV----------RIYAGYSGWTIGQLEGEIERDDWIVLSALP 165
Query: 276 SVIGLESGTLGLWEELL 292
S + L LW ++L
Sbjct: 166 SDV-LVGPRADLWGQVL 181
>gi|262374014|ref|ZP_06067291.1| conserved hypothetical protein [Acinetobacter junii SH205]
gi|262311025|gb|EEY92112.1| conserved hypothetical protein [Acinetobacter junii SH205]
Length = 184
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 65/157 (41%), Gaps = 14/157 (8%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
CL+ + D F TVI + + G GII+NRPS + IKE+ + + A
Sbjct: 10 CLIAPPDMADD--FFANTVIYVARHDEDGAQGIIINRPSDLQIKELLNDLEIDADNVHPH 67
Query: 184 PLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ GGPL E G L + G S + V E + T + + A + VG
Sbjct: 68 AVLQGGPLRPEAGFVLHT----GQPTWHSSI--AVGENVCITTSKDILDA--IAHNEGVG 119
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
++ G W K QL +EI G W + +I
Sbjct: 120 R--YQIALGYASWGKNQLEDEITRGDWLICDSDMDLI 154
>gi|237710670|ref|ZP_04541151.1| UPF0301 protein [Bacteroides sp. 9_1_42FAA]
gi|229455392|gb|EEO61113.1| UPF0301 protein [Bacteroides sp. 9_1_42FAA]
Length = 196
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 42/198 (21%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVL----D 175
P++G +LI++ ++ H F R V+L++ G GII+N K+ R +L
Sbjct: 15 PQQGSILISSPFMNDYH-FTRAVVLLIEHNDEGSMGIIMN-------KDFRYHILLNDLI 66
Query: 176 AAGTFSDR-PLFFGGPL-EEGLFLVS---------PKGGGDEVGKSGVFEQVMEGLYFGT 224
F+ R P++ GGP+ E +F + P G G + +G F V + + G
Sbjct: 67 PELEFAQRVPVYKGGPMSRETIFFLHTLKDLEGALPLGNG--LYLNGDFNAVQQYILDG- 123
Query: 225 KETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGT 284
K G RFF G GW+ QL +EI+ W + + L
Sbjct: 124 KPIEGV--------------IRFFAGYAGWDHGQLAKEIKENSWLIGKAGKETL-LNQHF 168
Query: 285 LGLWEELLWLM-GRRKVW 301
LW L M G+ +W
Sbjct: 169 RDLWHTSLNEMGGKYAIW 186
>gi|269137635|ref|YP_003294335.1| hypothetical protein ETAE_0277 [Edwardsiella tarda EIB202]
gi|387866387|ref|YP_005697856.1| protein YggE [Edwardsiella tarda FL6-60]
gi|267983295|gb|ACY83124.1| conserved hypothetical protein [Edwardsiella tarda EIB202]
gi|304557700|gb|ADM40364.1| YggE [Edwardsiella tarda FL6-60]
Length = 187
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 26/153 (16%)
Query: 138 FERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGGP 190
F+RTVI + G G+I+N+P SL+ ++ + DAA D+P+ GGP
Sbjct: 19 FKRTVIYVCEHNEDGAMGMIINKPLEQLTLSSLLEKLDITPSPRDAAIRL-DKPVLAGGP 77
Query: 191 LEE--GLFLVSPK---GGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDF 245
L E G L SP G ++G + + L ET+G + P++
Sbjct: 78 LAEDRGFVLHSPTDTFGSSADIGPGCMLTTSRDVL-----ETLGTDRQ--------PQEI 124
Query: 246 RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G C W K QL +E+ W ++
Sbjct: 125 LVTLGYCSWSKGQLEQELLDNAWLTVEADSQIL 157
>gi|359454407|ref|ZP_09243691.1| UPF0301 protein PSHAa2600 [Pseudoalteromonas sp. BSi20495]
gi|414070247|ref|ZP_11406234.1| hypothetical protein D172_1466 [Pseudoalteromonas sp. Bsw20308]
gi|358048578|dbj|GAA79940.1| UPF0301 protein PSHAa2600 [Pseudoalteromonas sp. BSi20495]
gi|410807345|gb|EKS13324.1| hypothetical protein D172_1466 [Pseudoalteromonas sp. Bsw20308]
Length = 185
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 16/164 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVL---DAAGTFSDRPLFFGGPL--E 192
F+R V I G G+++N+P +++ E+ + D + ++ GGP+ +
Sbjct: 20 FKRAVTYICEHNEDGAMGLVINQPINVTVGELLDKIEIDNDKTQQAAQVAVYAGGPVKTD 79
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
G L SPK G K + + T + V + A PE F G
Sbjct: 80 RGFVLHSPKLGYTSSQK------LSSDIMITTSKDVLASL----TTAQAPEQFIITLGYS 129
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GWE+ QL +E+ W + P +I + WE+ + ++G
Sbjct: 130 GWEQGQLEQELLDNSWLIIEADPKII-FNTPVEKRWEKAVSMLG 172
>gi|398334811|ref|ZP_10519516.1| transcriptional regulator [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
Length = 184
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 14/176 (7%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ E G +LI+ + + F +TVIL++ + G G++LN+ SI ++ + D
Sbjct: 3 MEETYNGKILISNSSI-VMDYFNQTVILMVEHDSQGAFGLVLNKKQEASIGDVIQGIPDH 61
Query: 177 AGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
P++ GGP++ +S ++ + G+ +V+ GLY + E+++
Sbjct: 62 VS--RTLPIYSGGPVDPT--FISVLHEDTQISQPGI--EVIPGLYLA--RSFDTLLELLE 113
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
++ F + G GW QL E+ W V + + L W+E L
Sbjct: 114 SSS----KFHVYQGYSGWGASQLETEMNRKSWVVHEATKDFV-LNQDPETTWQEAL 164
>gi|300309805|ref|YP_003773897.1| transcription regulator protein [Herbaspirillum seropedicae SmR1]
gi|300072590|gb|ADJ61989.1| transcription regulator protein [Herbaspirillum seropedicae SmR1]
Length = 193
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 22/154 (14%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIK----------EMRSTVLDAAGTFSDRPLF 186
IF TV+ + G G+++N+P+ M++ E++ DA RP+
Sbjct: 20 IFGGTVVYLCEHNHNGALGVVINKPTDMTMDVLFDRINLKLEIQPDTPDAMPELYRRPVM 79
Query: 187 FGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPED 244
FGGP+ E G L S K QV + + T + V A + GP+
Sbjct: 80 FGGPVQVERGFVLHSTSE------KYSSTLQVTDEVALTTSKDVLEAVA----HGNGPDR 129
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GC GW QL EI W PS+I
Sbjct: 130 VLVTLGCSGWSPGQLEGEIGRNGWLTVKADPSII 163
>gi|385792810|ref|YP_005825786.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|328676956|gb|AEB27826.1| hypothetical protein FNFX1_0878 [Francisella cf. novicida Fx1]
Length = 194
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LD 175
+++ K +L+AT + +F ++V+ + + G G+I+N+P ++K++ + +
Sbjct: 1 MYQNHKSEILLATPLIKDDIVFTKSVVYLCQNDRHGAMGLIINKPLADTLKDVFEELHIP 60
Query: 176 AAGTFS---DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAA 232
TF + PL+ GGP+ ++ G + + EGL ++
Sbjct: 61 HTNTFKEILEYPLYMGGPISPHKIMILHTTNGRNYTSTIKLD---EGL--AITASIDILE 115
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
++ N + PE F G W QL +EI++ W V
Sbjct: 116 DIA--NNILPEYFLPVVGYSCWTANQLTDEIKSNDWIVT 152
>gi|455647874|gb|EMF26794.1| hypothetical protein H114_22313 [Streptomyces gancidicus BKS 13-15]
Length = 190
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 14/173 (8%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + ++ D AG
Sbjct: 9 GRLLVATPALADPN-FDRAVVLLLDHDEEGSLGVVLNRPTPVDVGDILEGWADLAGEPGV 67
Query: 183 RPLFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+F GGP L+ L + V P G E G + +V + E A + +
Sbjct: 68 --VFQGGPVSLDSALGVAVVPGGAAGEEPPLG-WRRVHGAIGLVDLE----APPELLASV 120
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+G R F G GW QL +E+ G W V P + + LW E+L
Sbjct: 121 LG--SLRIFAGYAGWGPGQLEDELVDGAWYVVESEPGDVSCPAPER-LWREVL 170
>gi|121997729|ref|YP_001002516.1| hypothetical protein Hhal_0938 [Halorhodospira halophila SL1]
gi|121589134|gb|ABM61714.1| protein of unknown function DUF179 [Halorhodospira halophila SL1]
Length = 192
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM-RSTVLDAA-GTFSD 182
LIA LD + F +TV L+ G GI++NRP+ +++ ++ R L+ G D
Sbjct: 16 FLIAMPALDDPN-FAQTVTLLCEHTEDGAMGIVVNRPTEVTLGDLFRHLELEITDGCPED 74
Query: 183 RPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ +F GGP++ E F++ P+G + V EG+ T + A + R G
Sbjct: 75 QVVFAGGPVQRERGFVLHPEGE-----QWNATTPVCEGVALTTSRDILAA---LARGE-G 125
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE F G GW QL EE+ W VI
Sbjct: 126 PERFLVALGYAGWGAGQLEEELAQNAWLSGPAEARVI 162
>gi|54027485|ref|YP_121727.1| hypothetical protein nfa55110 [Nocardia farcinica IFM 10152]
gi|81372872|sp|Q5YN78.1|Y5511_NOCFA RecName: Full=UPF0301 protein NFA_55110
gi|54018993|dbj|BAD60363.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 214
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDA-AGT 179
G LL+A L F R+V+ I+ G G+++NRPS S+ ++ R + L A GT
Sbjct: 34 GTLLLAATDLTE-PTFRRSVVYIMEHNDSGSLGVVINRPSETSLADVLPRWSALAADPGT 92
Query: 180 FSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
L+FGGP+ + L L + K G G G+ G V AA+ +R
Sbjct: 93 -----LYFGGPVKRDAALCLGTLKVGASTAGVPGLRR------IDGRVVLVDLAADP-ER 140
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
A E R F G GW QL E+ W V + P+ + + LW ++L
Sbjct: 141 IAPLVEGIRVFAGYAGWTFGQLEGELDNEDWIVLSALPT-DPISAARPDLWADVL 194
>gi|334132215|ref|ZP_08505976.1| Putative transcriptional regulator [Methyloversatilis universalis
FAM5]
gi|333442861|gb|EGK70827.1| Putative transcriptional regulator [Methyloversatilis universalis
FAM5]
Length = 192
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 14/145 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPLE--E 193
F RT+ L+ G G+I+NRP MS+ ++ R + + F +P++FGGP++
Sbjct: 28 FARTLTLVCEHNDQGALGVIVNRPIDMSLDDLFERIDMTLESSRFQGQPVYFGGPVQTDR 87
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
G L P VG + GL + V + N PE+ G G
Sbjct: 88 GFVLHRP------VGSFQSSIDIGNGLALTSSRDV--LQSLGGENE--PEEVLVTLGYAG 137
Query: 254 WEKEQLNEEIRAGYWTVAACSPSVI 278
W+ Q+ E+ W P +I
Sbjct: 138 WQAGQIEWELAQNAWLTVRADPQII 162
>gi|332142457|ref|YP_004428195.1| transcription regulator [Alteromonas macleodii str. 'Deep ecotype']
gi|327552479|gb|AEA99197.1| Transcription regulator [Alteromonas macleodii str. 'Deep ecotype']
Length = 208
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 18/180 (10%)
Query: 94 SVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGP 153
SV AA+N+ Q ++ T + + L+A LD + F R++I + G
Sbjct: 2 SVQNAAAINW--QRKTNERRFMTELKSLQNHFLVAMPSLDDPY-FSRSLIYVCEHNAEGA 58
Query: 154 SGIILNRPSLMSIKEMRSTVLDAAGTFSDRP---LFFGGPL--EEGLFLVSPKGGGDEVG 208
GI++N+PS M++K++ A D+ + GGP+ E G L S + E
Sbjct: 59 MGIVVNQPSTMNVKQLLEQTDKALMVSDDKAEQIVLAGGPVNQERGFVLHSSQ---KEWA 115
Query: 209 KSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYW 268
S ++ G+ T + + A N GP+D G GW QL +E++ W
Sbjct: 116 SS---LKLAPGVMVTTSKDILTAI----ANDEGPDDVLIALGYAGWTAGQLEKEMQENAW 168
>gi|56708077|ref|YP_169973.1| hypothetical protein FTT_0985 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|89256537|ref|YP_513899.1| hypothetical protein FTL_1216 [Francisella tularensis subsp.
holarctica LVS]
gi|110670548|ref|YP_667105.1| hypothetical protein FTF0985 [Francisella tularensis subsp.
tularensis FSC198]
gi|115314968|ref|YP_763691.1| hypothetical protein FTH_1193 [Francisella tularensis subsp.
holarctica OSU18]
gi|118497458|ref|YP_898508.1| hypothetical protein FTN_0866 [Francisella novicida U112]
gi|134301890|ref|YP_001121859.1| hypothetical protein FTW_0891 [Francisella tularensis subsp.
tularensis WY96-3418]
gi|195536150|ref|ZP_03079157.1| conserved hypothetical protein [Francisella novicida FTE]
gi|208779254|ref|ZP_03246600.1| conserved hypothetical protein [Francisella novicida FTG]
gi|254370561|ref|ZP_04986566.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254372860|ref|ZP_04988349.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida GA99-3549]
gi|254374278|ref|ZP_04989760.1| conserved hypothetical protein [Francisella novicida GA99-3548]
gi|254874881|ref|ZP_05247591.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|379717319|ref|YP_005305655.1| hypothetical protein FTU_1025 [Francisella tularensis subsp.
tularensis TIGB03]
gi|379725923|ref|YP_005318109.1| hypothetical protein FTV_0941 [Francisella tularensis subsp.
tularensis TI0902]
gi|385794742|ref|YP_005831148.1| hypothetical protein NE061598_05650 [Francisella tularensis subsp.
tularensis NE061598]
gi|421751692|ref|ZP_16188731.1| hypothetical protein B345_04438 [Francisella tularensis subsp.
tularensis AS_713]
gi|421753547|ref|ZP_16190538.1| hypothetical protein B344_04390 [Francisella tularensis subsp.
tularensis 831]
gi|421755622|ref|ZP_16192564.1| hypothetical protein B343_05619 [Francisella tularensis subsp.
tularensis 80700075]
gi|421757273|ref|ZP_16194155.1| hypothetical protein B342_04441 [Francisella tularensis subsp.
tularensis 80700103]
gi|421759133|ref|ZP_16195967.1| hypothetical protein B341_04413 [Francisella tularensis subsp.
tularensis 70102010]
gi|422938901|ref|YP_007012048.1| hypothetical protein FTS_1190 [Francisella tularensis subsp.
holarctica FSC200]
gi|424674451|ref|ZP_18111369.1| hypothetical protein B229_04388 [Francisella tularensis subsp.
tularensis 70001275]
gi|81597501|sp|Q5NG69.1|Y985_FRATT RecName: Full=UPF0301 protein FTT_0985
gi|118574606|sp|Q14HM1.1|Y985_FRAT1 RecName: Full=UPF0301 protein FTF0985
gi|119391246|sp|Q2A303.1|Y1216_FRATH RecName: Full=UPF0301 protein FTL_1216
gi|122325019|sp|Q0BLI0.1|Y1193_FRATO RecName: Full=UPF0301 protein FTH_1193
gi|166201228|sp|A0Q689.1|Y866_FRATN RecName: Full=UPF0301 protein FTN_0866
gi|166227343|sp|A4IXT7.1|Y891_FRATW RecName: Full=UPF0301 protein FTW_0891
gi|54114275|gb|AAV29771.1| NT02FT0587 [synthetic construct]
gi|56604569|emb|CAG45618.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis SCHU S4]
gi|89144368|emb|CAJ79655.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica LVS]
gi|110320881|emb|CAL09001.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC198]
gi|115129867|gb|ABI83054.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica OSU18]
gi|118423364|gb|ABK89754.1| conserved hypothetical protein [Francisella novicida U112]
gi|134049667|gb|ABO46738.1| hypothetical protein FTW_0891 [Francisella tularensis subsp.
tularensis WY96-3418]
gi|151568804|gb|EDN34458.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|151570587|gb|EDN36241.1| conserved hypothetical protein [Francisella novicida GA99-3549]
gi|151571998|gb|EDN37652.1| conserved hypothetical protein [Francisella novicida GA99-3548]
gi|194372627|gb|EDX27338.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida FTE]
gi|208745054|gb|EDZ91352.1| conserved hypothetical protein [Francisella novicida FTG]
gi|254840880|gb|EET19316.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159277|gb|ADA78668.1| hypothetical protein NE061598_05650 [Francisella tularensis subsp.
tularensis NE061598]
gi|377827372|gb|AFB80620.1| UPF0301 protein YqgE [Francisella tularensis subsp. tularensis
TI0902]
gi|377828996|gb|AFB79075.1| UPF0301 protein YqgE [Francisella tularensis subsp. tularensis
TIGB03]
gi|407294052|gb|AFT92958.1| hypothetical protein FTS_1190 [Francisella tularensis subsp.
holarctica FSC200]
gi|409086813|gb|EKM86926.1| hypothetical protein B344_04390 [Francisella tularensis subsp.
tularensis 831]
gi|409087029|gb|EKM87139.1| hypothetical protein B345_04438 [Francisella tularensis subsp.
tularensis AS_713]
gi|409087780|gb|EKM87868.1| hypothetical protein B343_05619 [Francisella tularensis subsp.
tularensis 80700075]
gi|409091197|gb|EKM91200.1| hypothetical protein B341_04413 [Francisella tularensis subsp.
tularensis 70102010]
gi|409092728|gb|EKM92695.1| hypothetical protein B342_04441 [Francisella tularensis subsp.
tularensis 80700103]
gi|417434929|gb|EKT89861.1| hypothetical protein B229_04388 [Francisella tularensis subsp.
tularensis 70001275]
Length = 194
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LD 175
+++ K +L+AT + +F ++V+ + + G G+I+N+P ++K++ + +
Sbjct: 1 MYQNHKSEILLATPLIKDDIVFTKSVVYLCQNDRHGAMGLIINKPLADTLKDVFEELHIP 60
Query: 176 AAGTFS---DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAA 232
TF + PL+ GGP+ ++ G + + EGL ++
Sbjct: 61 HTNTFKEILEYPLYMGGPISPHKIMILHTTNGRNYTSTIKLD---EGL--AITASIDILE 115
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
++ N + PE F G W QL +EI++ W V
Sbjct: 116 DIA--NNILPEYFLPVVGYSCWTANQLTDEIKSNDWIVT 152
>gi|107021940|ref|YP_620267.1| hypothetical protein Bcen_0382 [Burkholderia cenocepacia AU 1054]
gi|116688887|ref|YP_834510.1| hypothetical protein Bcen2424_0864 [Burkholderia cenocepacia
HI2424]
gi|170732188|ref|YP_001764135.1| hypothetical protein Bcenmc03_0835 [Burkholderia cenocepacia MC0-3]
gi|119391984|sp|Q1BYL1.1|Y382_BURCA RecName: Full=UPF0301 protein Bcen_0382
gi|166235107|sp|A0K540.1|Y864_BURCH RecName: Full=UPF0301 protein Bcen2424_0864
gi|226708093|sp|B1JWN9.1|Y835_BURCC RecName: Full=UPF0301 protein Bcenmc03_0835
gi|105892129|gb|ABF75294.1| protein of unknown function DUF179 [Burkholderia cenocepacia AU
1054]
gi|116646976|gb|ABK07617.1| protein of unknown function DUF179 [Burkholderia cenocepacia
HI2424]
gi|169815430|gb|ACA90013.1| protein of unknown function DUF179 [Burkholderia cenocepacia MC0-3]
Length = 192
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 30/154 (19%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGPL--E 192
F TV+ + G G+++NRP+ + ++ + + + LD P++FGGP+ E
Sbjct: 26 FSGTVVYLCDHSERGALGLVINRPTDIDLESLFNRIDLKLDIEPLLH-IPVYFGGPVQTE 84
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV--------GPED 244
G L P +EG + + +V EM V GP+
Sbjct: 85 RGFVLHEP----------------VEGASYNSSMSVDGGLEMTTSKDVLEAVATGTGPKR 128
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
F G GW QL EEI W A P ++
Sbjct: 129 FLLTLGHAGWGAGQLEEEIARNGWLTVAADPRIV 162
>gi|421675789|ref|ZP_16115708.1| hypothetical protein ACIN5065_3385 [Acinetobacter baumannii
OIFC065]
gi|421692694|ref|ZP_16132345.1| hypothetical protein ACINIS116_0376 [Acinetobacter baumannii
IS-116]
gi|404559980|gb|EKA65231.1| hypothetical protein ACINIS116_0376 [Acinetobacter baumannii
IS-116]
gi|410381306|gb|EKP33872.1| hypothetical protein ACIN5065_3385 [Acinetobacter baumannii
OIFC065]
Length = 184
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 14/157 (8%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
CL+ E D F TVI + + G GII+NRP+ + IKE+ + + A +
Sbjct: 10 CLIAPPEMADD--FFANTVIYLARHDEEGAQGIIINRPAGIQIKELLNDLDIDADNVNPH 67
Query: 184 PLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ GGPL E G L + G S + V E + T + + A + VG
Sbjct: 68 EVLQGGPLRPEAGFVLHT----GQPTWHSSI--AVGENICITTSKDILDA--IAHNEGVG 119
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
++ G W K QL +EI G W + +I
Sbjct: 120 R--YQIALGYASWGKNQLEDEIARGDWLICDADMDLI 154
>gi|336322224|ref|YP_004602192.1| hypothetical protein Celgi_3133 [[Cellvibrio] gilvus ATCC 13127]
gi|336105805|gb|AEI13624.1| protein of unknown function DUF179 [[Cellvibrio] gilvus ATCC 13127]
Length = 181
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 66/158 (41%), Gaps = 18/158 (11%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
G LL+AT +L H F RTV+L+L G G++LNRP + ++ VL T
Sbjct: 4 SGRLLVATPRLLDPH-FHRTVVLLLDHTDEGAFGVVLNRPLPVEVE----AVLPGWQTVV 58
Query: 182 DRP--LFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
P LF GGP+ +G V+ D V ++ FG + + R
Sbjct: 59 SWPGGLFQGGPVGLDGAIGVAVASDDDPT----VVDRFTG--SFGLVDLDADPGSLAGRF 112
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPS 276
A R F G GW QL E+ G W V P+
Sbjct: 113 A----GLRIFAGHSGWGAGQLEAEVDEGAWFVVPAEPT 146
>gi|344941312|ref|ZP_08780600.1| UPF0301 protein yqgE [Methylobacter tundripaludum SV96]
gi|344262504|gb|EGW22775.1| UPF0301 protein yqgE [Methylobacter tundripaludum SV96]
Length = 187
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 53/133 (39%), Gaps = 10/133 (7%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPLEEGL 195
F TV + G GI++NRP+ M + E+ + + A ++ P+F GGP+++
Sbjct: 23 FFHTVAYLCQHNKDGALGIVINRPTDMKLGEIFKQMDIKVTAPAAAETPVFAGGPVQQER 82
Query: 196 FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWE 255
V GGD V E + E + GPE + G GW
Sbjct: 83 GFVVHTSGGDWHATMAVSETISLTTSRDVLEAIAAGE--------GPEQYLIALGYAGWS 134
Query: 256 KEQLNEEIRAGYW 268
QL +EI W
Sbjct: 135 AGQLEKEIMDNSW 147
>gi|299067787|emb|CBJ38997.1| conserved protein of unknown function, hypothetical UPF0301
protein, DUF179 domain [Ralstonia solanacearum CMR15]
Length = 190
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 61/149 (40%), Gaps = 22/149 (14%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT------FSDRPLFFGGPL 191
F TV+ + G G+++NRP + + +T+ D +++P+++GGP+
Sbjct: 26 FSGTVVYLCEHNERGALGLVINRPIDIDL----ATLFDKIDLKLEIHPLAEQPVYYGGPV 81
Query: 192 --EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFD 249
E G L D VG V GL T + V E V R GP+ F
Sbjct: 82 QTERGFVL------HDAVGSYSSSLTVPGGLEMTTSKDV---LEAVARGG-GPQRFILTL 131
Query: 250 GCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW QL EEI W P +I
Sbjct: 132 GYAGWSAGQLEEEIGRNGWLTVQADPDII 160
>gi|410938549|ref|ZP_11370396.1| hypothetical protein LEP1GSC041_0422 [Leptospira noguchii str.
2006001870]
gi|410786474|gb|EKR75418.1| hypothetical protein LEP1GSC041_0422 [Leptospira noguchii str.
2006001870]
Length = 182
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 18/178 (10%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ E G +LI+ + + F RTVILI+ + G G++LN+ SI E V+
Sbjct: 1 MEENYSGKILISNSSI-VMDYFNRTVILIVEHDNQGAFGLVLNKRQEASIGE----VIQG 55
Query: 177 AGTFSDRPL--FFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
R L + GGP++ +S +++ + G+ +++ GLY + E+
Sbjct: 56 IPKHVSRNLLIYSGGPVDPT--FISVLHEDNKISQPGI--EIIPGLYLA--RSFDTLLEL 109
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+K ++ F F G GW QL E+ W + S + L W+E L
Sbjct: 110 LKSSS----KFHVFQGYSGWGAGQLETEMNRKSWVIHEASKDFV-LNQDPETTWQEAL 162
>gi|312131229|ref|YP_003998569.1| hypothetical protein Lbys_2554 [Leadbetterella byssophila DSM
17132]
gi|311907775|gb|ADQ18216.1| protein of unknown function DUF179 [Leadbetterella byssophila DSM
17132]
Length = 178
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 31/166 (18%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
KG +LIA L G FER V+++ G G+++N+P+ + + + + +
Sbjct: 2 KGKILIAKPYL-GDPNFERAVVMVCEHSEEGAFGLVINQPTQHFLPDFFADINVSV---- 56
Query: 182 DRPLFFGGPLE-EGLFLVSPKGG--GDEVGKS------GVFEQVMEGLYFGTKETVGCAA 232
P+ GGP+E L + +G D + S G FEQ+ + L G
Sbjct: 57 --PVGIGGPVEGNTLHFLHTRGDLLDDAIELSPGLFWSGNFEQIKDYLNMG--------- 105
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
++K N + RF+ G GW +QL+EEI W + + I
Sbjct: 106 -VIKSNEI-----RFYLGYSGWGDKQLDEEIAEDLWVITSAEKDWI 145
>gi|254369475|ref|ZP_04985487.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|157122425|gb|EDO66565.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
Length = 194
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LD 175
+++ K +L+AT + +F ++V+ + + G G+I+N+P ++K++ + +
Sbjct: 1 MYQNHKSEILLATPLIKDDIVFTKSVVYLCQNDRHGAMGLIINKPLADTLKDVFEELHIP 60
Query: 176 AAGTFS---DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAA 232
TF + PL+ GGP+ ++ G + + EGL ++
Sbjct: 61 HTNTFKEILEYPLYMGGPISPHKIMILHTTNGRNYTSTIKLD---EGL--AITASIDILE 115
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
++ N + PE F G W QL +EI++ W V
Sbjct: 116 DIA--NNILPEYFLPVVGYSCWTANQLTDEIKSNDWIVT 152
>gi|29346488|ref|NP_809991.1| transcriptional regulator [Bacteroides thetaiotaomicron VPI-5482]
gi|298387735|ref|ZP_06997286.1| transcriptional regulator [Bacteroides sp. 1_1_14]
gi|383122719|ref|ZP_09943409.1| hypothetical protein BSIG_0534 [Bacteroides sp. 1_1_6]
gi|81445019|sp|Q8A8T9.1|Y1078_BACTN RecName: Full=UPF0301 protein BT_1078
gi|29338384|gb|AAO76185.1| putative transcriptional regulator [Bacteroides thetaiotaomicron
VPI-5482]
gi|251842181|gb|EES70261.1| hypothetical protein BSIG_0534 [Bacteroides sp. 1_1_6]
gi|298259591|gb|EFI02464.1| transcriptional regulator [Bacteroides sp. 1_1_14]
Length = 196
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 29/187 (15%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P +G +LI+ L F R+V+L++ G G+I+N+ + + + ++
Sbjct: 17 PSRGKILISEPFLRDA-TFGRSVVLLIDHTEEGSMGLIINKQLPIFVND----IIKEFKY 71
Query: 180 FSDRPLFFGGPL-EEGLFLVSPKG---GGDEVGK----SGVFEQVMEGLYFGTKETVGCA 231
+ PL+ GGP+ + LF + G + K +G F+++ + + G K
Sbjct: 72 IENIPLYKGGPIATDTLFYLHTLADIPGAIPISKGLYLNGDFDEIKKYILQGNK------ 125
Query: 232 AEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEEL 291
V R RFF G GWE EQL+ E++ W V+ + + + T +W++
Sbjct: 126 ---VDRY------IRFFLGYSGWESEQLSTELKENTWLVSKEENAYL-MNGDTKDMWKQA 175
Query: 292 LWLMGRR 298
L +G +
Sbjct: 176 LEKLGSK 182
>gi|447918830|ref|YP_007399398.1| hypothetical protein H045_19200 [Pseudomonas poae RE*1-1-14]
gi|445202693|gb|AGE27902.1| hypothetical protein H045_19200 [Pseudomonas poae RE*1-1-14]
Length = 189
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 138 FERTVILILSMEPMGPSGIILNRP---SLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEG 194
F +T+ I+ G G+++NRP +L I E +D + P++ GGP++
Sbjct: 25 FAQTLTYIVEHTANGAMGLVVNRPQELNLSDILEQLRPEIDPPSSCQSVPIYIGGPVQTD 84
Query: 195 L-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
F++ P G + ++G+ T + V A + VGPE G G
Sbjct: 85 RGFVLHPTGPTFQATVD------LDGVSLSTSQDVLFAIA----DGVGPEQSVIALGYAG 134
Query: 254 WEKEQLNEEIRAGYW 268
WE QL E+ + W
Sbjct: 135 WEAGQLEAELASNAW 149
>gi|182415442|ref|YP_001820508.1| hypothetical protein Oter_3631 [Opitutus terrae PB90-1]
gi|177842656|gb|ACB76908.1| protein of unknown function DUF179 [Opitutus terrae PB90-1]
Length = 184
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 67/154 (43%), Gaps = 28/154 (18%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+A L + F R ++L+ G G++LNRP + E+ A G+ +
Sbjct: 14 GSLLLAHPALRDPN-FRRAIVLMSVHNAEGAMGVVLNRPMGKRLGELNGEF--ALGSLAS 70
Query: 183 RPLFFGGPLE-EGLFLVS--PKGGGDEVGKSGVFEQVMEGLYFGT--KETVGCAAEMVKR 237
PLF GGP++ E L LV+ P+ G L+FG + + AAE +
Sbjct: 71 VPLFHGGPVQTEQLVLVAWQPQEDGFR-------------LHFGVEPERAMQLAAEEGTQ 117
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
R F G GW QL E++ W VA
Sbjct: 118 -------LRAFLGYSGWGGGQLEAELKQKTWLVA 144
>gi|406036259|ref|ZP_11043623.1| hypothetical protein AparD1_04731 [Acinetobacter parvus DSM 16617 =
CIP 108168]
Length = 184
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 14/157 (8%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
CL+ + D F TVI + + G GI++NRPS + I+E+ + + A
Sbjct: 10 CLIAPPDMADD--FFANTVIYVARHDEDGAQGIVINRPSNLQIRELLNDLEIDADNVQPH 67
Query: 184 PLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ GGPL E G L + G S + V E + T + + A + VG
Sbjct: 68 AVLQGGPLRPEAGFVLHT----GQPTWHSSI--AVGENVCITTSKDILDA--IAHNEGVG 119
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
++ G W K QL EEI G W + +I
Sbjct: 120 R--YQVALGYASWGKHQLEEEIARGDWLICESDMDLI 154
>gi|427400665|ref|ZP_18891903.1| hypothetical protein HMPREF9710_01499 [Massilia timonae CCUG 45783]
gi|425720178|gb|EKU83101.1| hypothetical protein HMPREF9710_01499 [Massilia timonae CCUG 45783]
Length = 218
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 62/144 (43%), Gaps = 18/144 (12%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAG---TFSDRPLFFGGPL 191
IF TV+ + G G+++N+P+ M+++ + R + A G T D P+ FGGP+
Sbjct: 50 IFGGTVVYVCEHNDKGVLGVVINKPTDMTMETLFDRVDLKLAEGLRATVVDEPIMFGGPV 109
Query: 192 EE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFD 249
++ G L SP GG V + V E V GP
Sbjct: 110 QDDRGFVLHSP--GGRYSSSLSVTDDVAFTTSIDVLEAVASGG--------GPARMLVSI 159
Query: 250 GCCGWEKEQLNEEI-RAGYWTVAA 272
G GW QL EEI R G+ TV A
Sbjct: 160 GYAGWSPGQLEEEISRNGWLTVGA 183
>gi|407931261|ref|YP_006846904.1| transcriptional regulator [Acinetobacter baumannii TYTH-1]
gi|193076169|gb|ABO10784.2| hypothetical protein A1S_0320 [Acinetobacter baumannii ATCC 17978]
gi|407899842|gb|AFU36673.1| putative transcriptional regulator [Acinetobacter baumannii TYTH-1]
Length = 179
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 14/157 (8%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
CL+ E D F TVI + + G GII+NRP+ + IKE+ + + A +
Sbjct: 5 CLIAPPEMADD--FFANTVIYLARHDEEGAQGIIINRPAGIQIKELLNDLDIDADNVNPH 62
Query: 184 PLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ GGPL E G L + G S + V E + T + + A + VG
Sbjct: 63 EVLQGGPLRPEAGFVLHT----GQPTWHSSI--AVGENVCITTSKDILDA--IAHNEGVG 114
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
++ G W K QL +EI G W + +I
Sbjct: 115 R--YQIALGYASWGKNQLEDEIARGDWLICDADMDLI 149
>gi|256821448|ref|YP_003145411.1| hypothetical protein Kkor_0222 [Kangiella koreensis DSM 16069]
gi|256794987|gb|ACV25643.1| protein of unknown function DUF179 [Kangiella koreensis DSM 16069]
Length = 187
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 14/145 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM-RSTVLDAAGTFSD-RPLFFGGPL--EE 193
F R+V I G GI+L+ P + E+ + +D + SD R L GGP+ E
Sbjct: 23 FSRSVTYICEHNEQGALGIVLSLPLEATYDELFKHLNIDTSSDQSDERLLLAGGPVDRER 82
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
G L SP G + + + + T E + A + GPED G G
Sbjct: 83 GFILHSPIGSWESSLT------ISDEIALSTSEDILQAIATQQ----GPEDVVIALGYAG 132
Query: 254 WEKEQLNEEIRAGYWTVAACSPSVI 278
WE+ QL +E+ W A +I
Sbjct: 133 WEEGQLEKEMEENSWLFAPADKEII 157
>gi|76581035|gb|ABA50510.1| Uncharacterized ACR, COG1678, putative [Burkholderia pseudomallei
1710b]
Length = 273
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 59/153 (38%), Gaps = 28/153 (18%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPL--EE 193
F TV+ + G G+++NRP+ + ++ + R + P++FGGP+ E
Sbjct: 107 FSGTVVYLCDHSERGALGLVINRPTDIDLESLFNRIDLKLEIEPLLHIPVYFGGPVQTER 166
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV--------GPEDF 245
G L P +EG + + TV EM V GP+ F
Sbjct: 167 GFVLHEP----------------VEGSAYNSSMTVEGGLEMTTSKDVLEAVATGTGPKRF 210
Query: 246 RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW QL EEI W A P ++
Sbjct: 211 LLTLGHAGWGAGQLEEEISKNGWLTVAADPRIV 243
>gi|229593126|ref|YP_002875245.1| hypothetical protein PFLU5755 [Pseudomonas fluorescens SBW25]
gi|259647131|sp|C3K3J9.1|Y5755_PSEFS RecName: Full=UPF0301 protein PFLU_5755
gi|229364992|emb|CAY53128.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 189
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 14/135 (10%)
Query: 138 FERTVILILSMEPMGPSGIILNRP---SLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEG 194
F +T+ I+ G G+++NRP +L I E +D P++ GGP++
Sbjct: 25 FAQTLTYIVEHTAKGAMGLVINRPQELNLADILEQLRPEVDPPARCQGVPIYIGGPVQTD 84
Query: 195 L-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
F++ P G + +EG+ T + V A + VGPE G G
Sbjct: 85 RGFVLHPTGPKFQATVD------LEGVSLSTSQDVLFAIA----DGVGPEQSVITLGYAG 134
Query: 254 WEKEQLNEEIRAGYW 268
WE QL E+ + W
Sbjct: 135 WEAGQLEAELASNAW 149
>gi|213966270|ref|ZP_03394454.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
gi|213951122|gb|EEB62520.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
Length = 213
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 30/215 (13%)
Query: 99 AAVNYPPQNSLGDKWAHTI--HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGI 156
A++N P+N GD+ ++ ++P G LL+A + F R+VI ++ + G G+
Sbjct: 2 ASIN--PENLYGDRLFTSLERNDPAAGMLLLAAPGILSPE-FARSVIFLIEHDEHGTLGV 58
Query: 157 ILNRPSLMSIKEMRSTVLDAAGTFSDRP--LFFGGPLEEGLFL---VSPKGGG-----DE 206
L + S + VL+ +P L+ GGP+ + + V G D
Sbjct: 59 DLTQRSQTPVH----NVLEPWAPLMAKPPVLYVGGPVNQTQPICIGVVRNGATLPEETDS 114
Query: 207 VGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAG 266
+ + + E++ +G E V+ G R F G GW+ QL +E+ G
Sbjct: 115 ITGAPLMERIAHRFAL---VNLGAEPEDVRDRIDG---ARIFAGYAGWDPGQLEDELERG 168
Query: 267 YWTVAACSPSVIGLESGTLGLWEELLWLMGRRKVW 301
W VA PS + L +W + + RR+ W
Sbjct: 169 DWYVAPALPSDV-LAPAAADIWGDCM----RRQPW 198
>gi|387887109|ref|YP_006317408.1| hypothetical protein OOM_1543 [Francisella noatunensis subsp.
orientalis str. Toba 04]
gi|386871925|gb|AFJ43932.1| hypothetical protein OOM_1543 [Francisella noatunensis subsp.
orientalis str. Toba 04]
Length = 193
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 15/159 (9%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAA 177
+ K +L+AT + IF ++VI + + G+I+N+P +++++ + +
Sbjct: 3 QNHKSEILLATPLIKDDAIFTKSVIYLCQNDRHDAMGLIINKPLSDTLRDVFEELEIPHN 62
Query: 178 GTFS---DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
TF+ D PL+ GGP+ ++ G + + EGL + + ++
Sbjct: 63 NTFNEILDYPLYMGGPISPHKIMILHTTNGRNYSSTIKLD---EGL------AITASMDI 113
Query: 235 VKR--NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
++ N + PE F G W +QL +EI++ W V
Sbjct: 114 LEDLANNILPEYFLPVVGYSCWTADQLTDEIKSNDWIVT 152
>gi|169634566|ref|YP_001708302.1| hypothetical protein ABSDF3201 [Acinetobacter baumannii SDF]
gi|169797421|ref|YP_001715214.1| hypothetical protein ABAYE3454 [Acinetobacter baumannii AYE]
gi|184156656|ref|YP_001844995.1| putative transcriptional regulator [Acinetobacter baumannii ACICU]
gi|213155765|ref|YP_002317810.1| hypothetical protein AB57_0401 [Acinetobacter baumannii AB0057]
gi|215484859|ref|YP_002327098.1| hypothetical protein ABBFA_003217 [Acinetobacter baumannii
AB307-0294]
gi|239500945|ref|ZP_04660255.1| hypothetical protein AbauAB_01390 [Acinetobacter baumannii AB900]
gi|260550508|ref|ZP_05824718.1| UPF0301 protein [Acinetobacter sp. RUH2624]
gi|260556313|ref|ZP_05828532.1| UPF0301 protein [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|301345138|ref|ZP_07225879.1| hypothetical protein AbauAB0_02817 [Acinetobacter baumannii AB056]
gi|301510701|ref|ZP_07235938.1| hypothetical protein AbauAB05_03959 [Acinetobacter baumannii AB058]
gi|301594961|ref|ZP_07239969.1| hypothetical protein AbauAB059_04104 [Acinetobacter baumannii
AB059]
gi|384130323|ref|YP_005512935.1| hypothetical protein [Acinetobacter baumannii 1656-2]
gi|384141610|ref|YP_005524320.1| hypothetical protein [Acinetobacter baumannii MDR-ZJ06]
gi|385235923|ref|YP_005797262.1| putative transcriptional regulator [Acinetobacter baumannii
TCDC-AB0715]
gi|387125430|ref|YP_006291312.1| putative transcriptional regulator [Acinetobacter baumannii MDR-TJ]
gi|403674699|ref|ZP_10936933.1| hypothetical protein ANCT1_08656 [Acinetobacter sp. NCTC 10304]
gi|416147204|ref|ZP_11601660.1| putative transcriptional regulator [Acinetobacter baumannii AB210]
gi|417546052|ref|ZP_12197138.1| hypothetical protein ACIN5032_0236 [Acinetobacter baumannii
OIFC032]
gi|417547979|ref|ZP_12199060.1| hypothetical protein ACINNAV18_0507 [Acinetobacter baumannii
Naval-18]
gi|417555530|ref|ZP_12206599.1| hypothetical protein ACINNAV81_3164 [Acinetobacter baumannii
Naval-81]
gi|417562978|ref|ZP_12213857.1| hypothetical protein ACIN3137_A3101 [Acinetobacter baumannii
OIFC137]
gi|417567346|ref|ZP_12218218.1| hypothetical protein ACIN5143_A0989 [Acinetobacter baumannii
OIFC143]
gi|417571436|ref|ZP_12222293.1| hypothetical protein ACIN5189_A3119 [Acinetobacter baumannii
OIFC189]
gi|417575224|ref|ZP_12226077.1| hypothetical protein ACINBC5_A0591 [Acinetobacter baumannii Canada
BC-5]
gi|417576559|ref|ZP_12227404.1| hypothetical protein ACINNAV7_A2200 [Acinetobacter baumannii
Naval-17]
gi|417870970|ref|ZP_12515914.1| hypothetical protein ABNIH1_12616 [Acinetobacter baumannii ABNIH1]
gi|417875628|ref|ZP_12520433.1| hypothetical protein ABNIH2_16311 [Acinetobacter baumannii ABNIH2]
gi|417879878|ref|ZP_12524429.1| hypothetical protein ABNIH3_17388 [Acinetobacter baumannii ABNIH3]
gi|417881965|ref|ZP_12526273.1| hypothetical protein ABNIH4_06090 [Acinetobacter baumannii ABNIH4]
gi|421201280|ref|ZP_15658439.1| hypothetical protein ACIN5109_1596 [Acinetobacter baumannii
OIFC109]
gi|421203413|ref|ZP_15660552.1| transcriptional regulator [Acinetobacter baumannii AC12]
gi|421456907|ref|ZP_15906245.1| hypothetical protein ACINIS123_0766 [Acinetobacter baumannii
IS-123]
gi|421534980|ref|ZP_15981247.1| UPF0301 family protein [Acinetobacter baumannii AC30]
gi|421620290|ref|ZP_16061228.1| hypothetical protein ACIN5074_3567 [Acinetobacter baumannii
OIFC074]
gi|421627253|ref|ZP_16068064.1| hypothetical protein ACIN5098_0422 [Acinetobacter baumannii
OIFC098]
gi|421630675|ref|ZP_16071376.1| hypothetical protein ACIN5180_0415 [Acinetobacter baumannii
OIFC180]
gi|421633985|ref|ZP_16074606.1| hypothetical protein ACINNAV13_0501 [Acinetobacter baumannii
Naval-13]
gi|421642558|ref|ZP_16083073.1| hypothetical protein ACINIS235_0380 [Acinetobacter baumannii
IS-235]
gi|421649316|ref|ZP_16089711.1| hypothetical protein ACINIS251_0318 [Acinetobacter baumannii
IS-251]
gi|421651012|ref|ZP_16091384.1| hypothetical protein ACIN5162_0295 [Acinetobacter baumannii
OIFC0162]
gi|421655186|ref|ZP_16095510.1| hypothetical protein ACINNAV72_0384 [Acinetobacter baumannii
Naval-72]
gi|421659410|ref|ZP_16099631.1| hypothetical protein ACINNAV83_0406 [Acinetobacter baumannii
Naval-83]
gi|421662348|ref|ZP_16102516.1| hypothetical protein ACIN5110_3473 [Acinetobacter baumannii
OIFC110]
gi|421666421|ref|ZP_16106513.1| hypothetical protein ACIN5087_0353 [Acinetobacter baumannii
OIFC087]
gi|421671157|ref|ZP_16111139.1| hypothetical protein ACIN5099_0369 [Acinetobacter baumannii
OIFC099]
gi|421677474|ref|ZP_16117366.1| hypothetical protein ACIN5111_0348 [Acinetobacter baumannii
OIFC111]
gi|421688522|ref|ZP_16128222.1| hypothetical protein ACINIS143_0380 [Acinetobacter baumannii
IS-143]
gi|421693882|ref|ZP_16133514.1| hypothetical protein ACINWC692_0376 [Acinetobacter baumannii
WC-692]
gi|421698015|ref|ZP_16137559.1| hypothetical protein ACINIS58_0383 [Acinetobacter baumannii IS-58]
gi|421702059|ref|ZP_16141544.1| hypothetical protein B825_02351 [Acinetobacter baumannii ZWS1122]
gi|421705798|ref|ZP_16145219.1| hypothetical protein B837_01978 [Acinetobacter baumannii ZWS1219]
gi|421789993|ref|ZP_16226232.1| hypothetical protein ACINNAV82_0299 [Acinetobacter baumannii
Naval-82]
gi|421792289|ref|ZP_16228444.1| hypothetical protein ACINNAV2_0356 [Acinetobacter baumannii
Naval-2]
gi|421798028|ref|ZP_16234062.1| hypothetical protein ACINNAV21_3477 [Acinetobacter baumannii
Naval-21]
gi|421800963|ref|ZP_16236930.1| hypothetical protein ACINCANBC1_0413 [Acinetobacter baumannii
Canada BC1]
gi|421806256|ref|ZP_16242128.1| hypothetical protein ACINWCA694_0377 [Acinetobacter baumannii
WC-A-694]
gi|421807881|ref|ZP_16243738.1| hypothetical protein ACIN5035_0341 [Acinetobacter baumannii
OIFC035]
gi|424053917|ref|ZP_17791448.1| UPF0301 protein [Acinetobacter baumannii Ab11111]
gi|424057186|ref|ZP_17794703.1| UPF0301 protein [Acinetobacter nosocomialis Ab22222]
gi|424061359|ref|ZP_17798849.1| UPF0301 protein [Acinetobacter baumannii Ab33333]
gi|424064853|ref|ZP_17802337.1| UPF0301 protein [Acinetobacter baumannii Ab44444]
gi|425742076|ref|ZP_18860198.1| hypothetical protein ACINWC487_0314 [Acinetobacter baumannii
WC-487]
gi|425749167|ref|ZP_18867147.1| hypothetical protein ACINWC348_0399 [Acinetobacter baumannii
WC-348]
gi|425751416|ref|ZP_18869361.1| hypothetical protein ACINNAV113_0405 [Acinetobacter baumannii
Naval-113]
gi|445407817|ref|ZP_21432410.1| hypothetical protein ACINNAV57_0344 [Acinetobacter baumannii
Naval-57]
gi|445437617|ref|ZP_21441166.1| hypothetical protein ACIN5021_0363 [Acinetobacter baumannii
OIFC021]
gi|445446721|ref|ZP_21443352.1| hypothetical protein ACINWCA92_0395 [Acinetobacter baumannii
WC-A-92]
gi|445458135|ref|ZP_21446959.1| hypothetical protein ACIN5047_0341 [Acinetobacter baumannii
OIFC047]
gi|445465127|ref|ZP_21449905.1| hypothetical protein ACIN7338_0413 [Acinetobacter baumannii
OIFC338]
gi|445481550|ref|ZP_21455994.1| hypothetical protein ACINNAV78_0371 [Acinetobacter baumannii
Naval-78]
gi|445492958|ref|ZP_21460716.1| hypothetical protein ACINAA014_0360 [Acinetobacter baumannii
AA-014]
gi|226703747|sp|B0VLV9.1|Y3201_ACIBS RecName: Full=UPF0301 protein ABSDF3201
gi|226703758|sp|B7H1G7.1|Y3217_ACIB3 RecName: Full=UPF0301 protein ABBFA_003217
gi|226703796|sp|B2I2L3.1|Y336_ACIBC RecName: Full=UPF0301 protein ACICU_00336
gi|226703830|sp|B0VE54.1|Y3454_ACIBY RecName: Full=UPF0301 protein ABAYE3454
gi|226706101|sp|B7I3Q5.1|Y401_ACIB5 RecName: Full=UPF0301 protein AB57_0401
gi|169150348|emb|CAM88245.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
gi|169153358|emb|CAP02475.1| conserved hypothetical protein [Acinetobacter baumannii]
gi|183208250|gb|ACC55648.1| putative transcriptional regulator [Acinetobacter baumannii ACICU]
gi|213054925|gb|ACJ39827.1| conserved hypothetical protein [Acinetobacter baumannii AB0057]
gi|213985785|gb|ACJ56084.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
gi|260406423|gb|EEW99905.1| UPF0301 protein [Acinetobacter sp. RUH2624]
gi|260410368|gb|EEX03667.1| UPF0301 protein [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|322506543|gb|ADX01997.1| Hypothetical protein ABK1_0363 [Acinetobacter baumannii 1656-2]
gi|323516422|gb|ADX90803.1| putative transcriptional regulator [Acinetobacter baumannii
TCDC-AB0715]
gi|333365775|gb|EGK47789.1| putative transcriptional regulator [Acinetobacter baumannii AB210]
gi|342224981|gb|EGT89991.1| hypothetical protein ABNIH2_16311 [Acinetobacter baumannii ABNIH2]
gi|342226286|gb|EGT91259.1| hypothetical protein ABNIH1_12616 [Acinetobacter baumannii ABNIH1]
gi|342227212|gb|EGT92151.1| hypothetical protein ABNIH3_17388 [Acinetobacter baumannii ABNIH3]
gi|342238214|gb|EGU02647.1| hypothetical protein ABNIH4_06090 [Acinetobacter baumannii ABNIH4]
gi|347592103|gb|AEP04824.1| conserve hypothetical protein [Acinetobacter baumannii MDR-ZJ06]
gi|385879922|gb|AFI97017.1| putative transcriptional regulator [Acinetobacter baumannii MDR-TJ]
gi|395525560|gb|EJG13649.1| hypothetical protein ACIN3137_A3101 [Acinetobacter baumannii
OIFC137]
gi|395551884|gb|EJG17893.1| hypothetical protein ACIN5189_A3119 [Acinetobacter baumannii
OIFC189]
gi|395553018|gb|EJG19026.1| hypothetical protein ACIN5143_A0989 [Acinetobacter baumannii
OIFC143]
gi|395563312|gb|EJG24965.1| hypothetical protein ACIN5109_1596 [Acinetobacter baumannii
OIFC109]
gi|395569780|gb|EJG30442.1| hypothetical protein ACINNAV7_A2200 [Acinetobacter baumannii
Naval-17]
gi|398327066|gb|EJN43205.1| transcriptional regulator [Acinetobacter baumannii AC12]
gi|400205957|gb|EJO36937.1| hypothetical protein ACINBC5_A0591 [Acinetobacter baumannii Canada
BC-5]
gi|400210611|gb|EJO41580.1| hypothetical protein ACINIS123_0766 [Acinetobacter baumannii
IS-123]
gi|400383940|gb|EJP42618.1| hypothetical protein ACIN5032_0236 [Acinetobacter baumannii
OIFC032]
gi|400388278|gb|EJP51350.1| hypothetical protein ACINNAV18_0507 [Acinetobacter baumannii
Naval-18]
gi|400391947|gb|EJP58994.1| hypothetical protein ACINNAV81_3164 [Acinetobacter baumannii
Naval-81]
gi|404561265|gb|EKA66501.1| hypothetical protein ACINIS143_0380 [Acinetobacter baumannii
IS-143]
gi|404569721|gb|EKA74806.1| hypothetical protein ACINWC692_0376 [Acinetobacter baumannii
WC-692]
gi|404573061|gb|EKA78101.1| hypothetical protein ACINIS58_0383 [Acinetobacter baumannii IS-58]
gi|404667041|gb|EKB34971.1| UPF0301 protein [Acinetobacter baumannii Ab33333]
gi|404667403|gb|EKB35324.1| UPF0301 protein [Acinetobacter baumannii Ab11111]
gi|404672936|gb|EKB40740.1| UPF0301 protein [Acinetobacter baumannii Ab44444]
gi|407194822|gb|EKE65958.1| hypothetical protein B825_02351 [Acinetobacter baumannii ZWS1122]
gi|407195211|gb|EKE66345.1| hypothetical protein B837_01978 [Acinetobacter baumannii ZWS1219]
gi|407440719|gb|EKF47236.1| UPF0301 protein [Acinetobacter nosocomialis Ab22222]
gi|408509024|gb|EKK10700.1| hypothetical protein ACIN5162_0295 [Acinetobacter baumannii
OIFC0162]
gi|408509323|gb|EKK10998.1| hypothetical protein ACINNAV72_0384 [Acinetobacter baumannii
Naval-72]
gi|408512612|gb|EKK14251.1| hypothetical protein ACINIS235_0380 [Acinetobacter baumannii
IS-235]
gi|408514089|gb|EKK15701.1| hypothetical protein ACINIS251_0318 [Acinetobacter baumannii
IS-251]
gi|408693344|gb|EKL38953.1| hypothetical protein ACIN5098_0422 [Acinetobacter baumannii
OIFC098]
gi|408697061|gb|EKL42581.1| hypothetical protein ACIN5180_0415 [Acinetobacter baumannii
OIFC180]
gi|408700950|gb|EKL46395.1| hypothetical protein ACIN5074_3567 [Acinetobacter baumannii
OIFC074]
gi|408705092|gb|EKL50441.1| hypothetical protein ACINNAV13_0501 [Acinetobacter baumannii
Naval-13]
gi|408708121|gb|EKL53399.1| hypothetical protein ACINNAV83_0406 [Acinetobacter baumannii
Naval-83]
gi|408715151|gb|EKL60281.1| hypothetical protein ACIN5110_3473 [Acinetobacter baumannii
OIFC110]
gi|409987128|gb|EKO43314.1| UPF0301 family protein [Acinetobacter baumannii AC30]
gi|410383454|gb|EKP35987.1| hypothetical protein ACIN5099_0369 [Acinetobacter baumannii
OIFC099]
gi|410388346|gb|EKP40785.1| hypothetical protein ACIN5087_0353 [Acinetobacter baumannii
OIFC087]
gi|410393230|gb|EKP45584.1| hypothetical protein ACIN5111_0348 [Acinetobacter baumannii
OIFC111]
gi|410395653|gb|EKP47947.1| hypothetical protein ACINNAV21_3477 [Acinetobacter baumannii
Naval-21]
gi|410396419|gb|EKP48687.1| hypothetical protein ACINNAV82_0299 [Acinetobacter baumannii
Naval-82]
gi|410400596|gb|EKP52764.1| hypothetical protein ACINNAV2_0356 [Acinetobacter baumannii
Naval-2]
gi|410406324|gb|EKP58336.1| hypothetical protein ACINCANBC1_0413 [Acinetobacter baumannii
Canada BC1]
gi|410407133|gb|EKP59121.1| hypothetical protein ACINWCA694_0377 [Acinetobacter baumannii
WC-A-694]
gi|410416060|gb|EKP67835.1| hypothetical protein ACIN5035_0341 [Acinetobacter baumannii
OIFC035]
gi|425488977|gb|EKU55300.1| hypothetical protein ACINWC487_0314 [Acinetobacter baumannii
WC-487]
gi|425489240|gb|EKU55552.1| hypothetical protein ACINWC348_0399 [Acinetobacter baumannii
WC-348]
gi|425499863|gb|EKU65891.1| hypothetical protein ACINNAV113_0405 [Acinetobacter baumannii
Naval-113]
gi|444753653|gb|ELW78292.1| hypothetical protein ACIN5021_0363 [Acinetobacter baumannii
OIFC021]
gi|444759663|gb|ELW84125.1| hypothetical protein ACINWCA92_0395 [Acinetobacter baumannii
WC-A-92]
gi|444762742|gb|ELW87095.1| hypothetical protein ACINAA014_0360 [Acinetobacter baumannii
AA-014]
gi|444770342|gb|ELW94499.1| hypothetical protein ACINNAV78_0371 [Acinetobacter baumannii
Naval-78]
gi|444775779|gb|ELW99835.1| hypothetical protein ACIN5047_0341 [Acinetobacter baumannii
OIFC047]
gi|444779259|gb|ELX03253.1| hypothetical protein ACIN7338_0413 [Acinetobacter baumannii
OIFC338]
gi|444780966|gb|ELX04891.1| hypothetical protein ACINNAV57_0344 [Acinetobacter baumannii
Naval-57]
gi|452955598|gb|EME60995.1| hypothetical protein G347_00875 [Acinetobacter baumannii MSP4-16]
Length = 184
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 14/157 (8%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
CL+ E D F TVI + + G GII+NRP+ + IKE+ + + A +
Sbjct: 10 CLIAPPEMADD--FFANTVIYLARHDEEGAQGIIINRPAGIQIKELLNDLDIDADNVNPH 67
Query: 184 PLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ GGPL E G L + G S + V E + T + + A + VG
Sbjct: 68 EVLQGGPLRPEAGFVLHT----GQPTWHSSI--AVGENVCITTSKDILDA--IAHNEGVG 119
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
++ G W K QL +EI G W + +I
Sbjct: 120 R--YQIALGYASWGKNQLEDEIARGDWLICDADMDLI 154
>gi|253998342|ref|YP_003050405.1| hypothetical protein Msip34_0630 [Methylovorus glucosetrophus
SIP3-4]
gi|313200416|ref|YP_004039074.1| hypothetical protein MPQ_0656 [Methylovorus sp. MP688]
gi|253985021|gb|ACT49878.1| protein of unknown function DUF179 [Methylovorus glucosetrophus
SIP3-4]
gi|312439732|gb|ADQ83838.1| conserved hypothetical protein [Methylovorus sp. MP688]
Length = 186
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 20/148 (13%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGP--LE 192
F ++V I G GI++NRP+ M+++E+ S + LD A + + FGGP ++
Sbjct: 22 FAKSVTYICEHNADGALGIVINRPTEMTLQELFSQINLSLDDA-EMAASAVHFGGPVQID 80
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK--RNAVGPEDFRFFDG 250
G L P G + K T+ + ++++ N GPE G
Sbjct: 81 RGFVLHQPPG------------DWQSSISINGKTTLTTSKDVLEAVANGTGPEKIFISLG 128
Query: 251 CCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GW QL +E+ W +V+
Sbjct: 129 YSGWAAGQLEQEMAQNAWLSVPADDTVL 156
>gi|150005491|ref|YP_001300235.1| transcriptional regulator [Bacteroides vulgatus ATCC 8482]
gi|212694995|ref|ZP_03303123.1| hypothetical protein BACDOR_04532 [Bacteroides dorei DSM 17855]
gi|265750343|ref|ZP_06086406.1| UPF0301 protein [Bacteroides sp. 3_1_33FAA]
gi|294778693|ref|ZP_06744112.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|319640715|ref|ZP_07995429.1| transcriptional regulator [Bacteroides sp. 3_1_40A]
gi|345516322|ref|ZP_08795815.1| hypothetical protein BSEG_00134 [Bacteroides dorei 5_1_36/D4]
gi|345517727|ref|ZP_08797192.1| hypothetical protein BSFG_03290 [Bacteroides sp. 4_3_47FAA]
gi|423232428|ref|ZP_17218829.1| hypothetical protein HMPREF1063_04649 [Bacteroides dorei
CL02T00C15]
gi|423238859|ref|ZP_17219975.1| hypothetical protein HMPREF1065_00598 [Bacteroides dorei
CL03T12C01]
gi|423242936|ref|ZP_17224012.1| hypothetical protein HMPREF1064_00218 [Bacteroides dorei
CL02T12C06]
gi|423311600|ref|ZP_17289537.1| hypothetical protein HMPREF1058_00149 [Bacteroides vulgatus
CL09T03C04]
gi|149933915|gb|ABR40613.1| putative transcriptional regulator [Bacteroides vulgatus ATCC 8482]
gi|212662448|gb|EEB23022.1| putative ACR, COG1678 [Bacteroides dorei DSM 17855]
gi|229433916|gb|EEO43993.1| hypothetical protein BSEG_00134 [Bacteroides dorei 5_1_36/D4]
gi|254836834|gb|EET17143.1| hypothetical protein BSFG_03290 [Bacteroides sp. 4_3_47FAA]
gi|263237239|gb|EEZ22689.1| UPF0301 protein [Bacteroides sp. 3_1_33FAA]
gi|294447349|gb|EFG15930.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|317387677|gb|EFV68542.1| transcriptional regulator [Bacteroides sp. 3_1_40A]
gi|392624477|gb|EIY18564.1| hypothetical protein HMPREF1063_04649 [Bacteroides dorei
CL02T00C15]
gi|392646724|gb|EIY40436.1| hypothetical protein HMPREF1064_00218 [Bacteroides dorei
CL02T12C06]
gi|392647737|gb|EIY41435.1| hypothetical protein HMPREF1065_00598 [Bacteroides dorei
CL03T12C01]
gi|392690245|gb|EIY83515.1| hypothetical protein HMPREF1058_00149 [Bacteroides vulgatus
CL09T03C04]
Length = 196
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 42/198 (21%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVL----D 175
P++G +LI++ ++ H F R V+L++ G GII+N K+ R +L
Sbjct: 15 PQQGSILISSPFMNDYH-FTRAVVLLIEHNDEGSMGIIMN-------KDFRYHILLNDLI 66
Query: 176 AAGTFSDR-PLFFGGPL-EEGLFLVS---------PKGGGDEVGKSGVFEQVMEGLYFGT 224
F+ R P++ GGP+ E +F + P G G + +G F V + + G
Sbjct: 67 PELEFAQRVPVYKGGPVSRETIFFLHTLKDLEGALPLGNG--LYLNGDFNAVQQYILDG- 123
Query: 225 KETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGT 284
K G RFF G GW+ QL +EI+ W + + L
Sbjct: 124 KPIEGV--------------IRFFAGYAGWDHGQLAKEIKENSWLIGKAGKETL-LNQHF 168
Query: 285 LGLWEELLWLM-GRRKVW 301
LW L M G+ +W
Sbjct: 169 RDLWHTSLNEMGGKYAIW 186
>gi|53720303|ref|YP_109289.1| hypothetical protein BPSL2693 [Burkholderia pseudomallei K96243]
gi|53725989|ref|YP_103584.1| hypothetical protein BMA1997 [Burkholderia mallei ATCC 23344]
gi|67643858|ref|ZP_00442601.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
gi|121600284|ref|YP_992256.1| hypothetical protein BMASAVP1_A0916 [Burkholderia mallei SAVP1]
gi|124384420|ref|YP_001028698.1| hypothetical protein BMA10229_A2746 [Burkholderia mallei NCTC
10229]
gi|126438866|ref|YP_001060124.1| hypothetical protein BURPS668_3112 [Burkholderia pseudomallei 668]
gi|126451060|ref|YP_001081396.1| hypothetical protein BMA10247_1859 [Burkholderia mallei NCTC 10247]
gi|126453877|ref|YP_001067386.1| hypothetical protein BURPS1106A_3148 [Burkholderia pseudomallei
1106a]
gi|134280396|ref|ZP_01767107.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|162210036|ref|YP_334542.2| hypothetical protein BURPS1710b_3170 [Burkholderia pseudomallei
1710b]
gi|167000843|ref|ZP_02266648.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
gi|167720881|ref|ZP_02404117.1| hypothetical protein BpseD_17874 [Burkholderia pseudomallei DM98]
gi|167739862|ref|ZP_02412636.1| hypothetical protein Bpse14_17509 [Burkholderia pseudomallei 14]
gi|167817083|ref|ZP_02448763.1| hypothetical protein Bpse9_18237 [Burkholderia pseudomallei 91]
gi|167825493|ref|ZP_02456964.1| hypothetical protein Bpseu9_17620 [Burkholderia pseudomallei 9]
gi|167846984|ref|ZP_02472492.1| hypothetical protein BpseB_17030 [Burkholderia pseudomallei B7210]
gi|167895565|ref|ZP_02482967.1| hypothetical protein Bpse7_17609 [Burkholderia pseudomallei 7894]
gi|167903962|ref|ZP_02491167.1| hypothetical protein BpseN_17054 [Burkholderia pseudomallei NCTC
13177]
gi|167912214|ref|ZP_02499305.1| hypothetical protein Bpse112_17130 [Burkholderia pseudomallei 112]
gi|167920175|ref|ZP_02507266.1| hypothetical protein BpseBC_16637 [Burkholderia pseudomallei
BCC215]
gi|217420503|ref|ZP_03452008.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|226193793|ref|ZP_03789395.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|237813516|ref|YP_002897967.1| hypothetical protein GBP346_A3292 [Burkholderia pseudomallei
MSHR346]
gi|242317649|ref|ZP_04816665.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
gi|254175335|ref|ZP_04881995.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|254180907|ref|ZP_04887505.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
gi|254191752|ref|ZP_04898255.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|254196010|ref|ZP_04902435.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
gi|254202274|ref|ZP_04908637.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|254207607|ref|ZP_04913957.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|254261296|ref|ZP_04952350.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
gi|254298980|ref|ZP_04966430.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|254356491|ref|ZP_04972767.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
gi|386860739|ref|YP_006273688.1| hypothetical protein BP1026B_I0626 [Burkholderia pseudomallei
1026b]
gi|403519815|ref|YP_006653949.1| hypothetical protein BPC006_I3192 [Burkholderia pseudomallei
BPC006]
gi|418380139|ref|ZP_12966133.1| hypothetical protein BP354A_0584 [Burkholderia pseudomallei 354a]
gi|418533209|ref|ZP_13099076.1| hypothetical protein BP1026A_0119 [Burkholderia pseudomallei 1026a]
gi|418539990|ref|ZP_13105558.1| hypothetical protein BP1258A_0467 [Burkholderia pseudomallei 1258a]
gi|418546240|ref|ZP_13111465.1| hypothetical protein BP1258B_0560 [Burkholderia pseudomallei 1258b]
gi|418557280|ref|ZP_13121875.1| hypothetical protein BP354E_4968 [Burkholderia pseudomallei 354e]
gi|81379218|sp|Q63RH9.1|Y2693_BURPS RecName: Full=UPF0301 protein BPSL2693
gi|81604560|sp|Q62I86.1|Y1997_BURMA RecName: Full=UPF0301 protein BMA1997
gi|118574341|sp|Q3JPG1.2|Y3170_BURP1 RecName: Full=UPF0301 protein BURPS1710b_3170
gi|166227248|sp|A3MMB0.1|Y4359_BURM7 RecName: Full=UPF0301 protein BMA10247_1859
gi|166227304|sp|A2S9S9.1|Y5046_BURM9 RecName: Full=UPF0301 protein BMA10229_A2746
gi|166228437|sp|A1V203.1|Y2716_BURMS RecName: Full=UPF0301 protein BMASAVP1_A0916
gi|166229382|sp|A3NCQ3.1|Y3112_BURP6 RecName: Full=UPF0301 protein BURPS668_3112
gi|166229391|sp|A3NYG5.1|Y3148_BURP0 RecName: Full=UPF0301 protein BURPS1106A_3148
gi|52210717|emb|CAH36701.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|52429412|gb|AAU50005.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
gi|121229094|gb|ABM51612.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
gi|124292440|gb|ABN01709.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
gi|126218359|gb|ABN81865.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
gi|126227519|gb|ABN91059.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a]
gi|126243930|gb|ABO07023.1| conserved hypothetical protein [Burkholderia mallei NCTC 10247]
gi|134248403|gb|EBA48486.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|147746521|gb|EDK53598.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|147751501|gb|EDK58568.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|148025488|gb|EDK83642.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
gi|157809119|gb|EDO86289.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|157939423|gb|EDO95093.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|160696379|gb|EDP86349.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|169652754|gb|EDS85447.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
gi|184211446|gb|EDU08489.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
gi|217395915|gb|EEC35932.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|225934098|gb|EEH30083.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|237504860|gb|ACQ97178.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
gi|238525305|gb|EEP88733.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
gi|242140888|gb|EES27290.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
gi|243063273|gb|EES45459.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
gi|254219985|gb|EET09369.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
gi|385361244|gb|EIF67129.1| hypothetical protein BP1026A_0119 [Burkholderia pseudomallei 1026a]
gi|385362957|gb|EIF68745.1| hypothetical protein BP1258A_0467 [Burkholderia pseudomallei 1258a]
gi|385364922|gb|EIF70619.1| hypothetical protein BP354E_4968 [Burkholderia pseudomallei 354e]
gi|385365139|gb|EIF70834.1| hypothetical protein BP1258B_0560 [Burkholderia pseudomallei 1258b]
gi|385377620|gb|EIF82181.1| hypothetical protein BP354A_0584 [Burkholderia pseudomallei 354a]
gi|385657867|gb|AFI65290.1| hypothetical protein BP1026B_I0626 [Burkholderia pseudomallei
1026b]
gi|403075458|gb|AFR17038.1| hypothetical protein BPC006_I3192 [Burkholderia pseudomallei
BPC006]
Length = 192
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 59/153 (38%), Gaps = 28/153 (18%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPL--EE 193
F TV+ + G G+++NRP+ + ++ + R + P++FGGP+ E
Sbjct: 26 FSGTVVYLCDHSERGALGLVINRPTDIDLESLFNRIDLKLEIEPLLHIPVYFGGPVQTER 85
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV--------GPEDF 245
G L P +EG + + TV EM V GP+ F
Sbjct: 86 GFVLHEP----------------VEGSAYNSSMTVEGGLEMTTSKDVLEAVATGTGPKRF 129
Query: 246 RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW QL EEI W A P ++
Sbjct: 130 LLTLGHAGWGAGQLEEEISKNGWLTVAADPRIV 162
>gi|404445709|ref|ZP_11010842.1| hypothetical protein MVAC_20728 [Mycobacterium vaccae ATCC 25954]
gi|403651686|gb|EJZ06791.1| hypothetical protein MVAC_20728 [Mycobacterium vaccae ATCC 25954]
Length = 201
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 80/189 (42%), Gaps = 23/189 (12%)
Query: 111 DKWAHTIHEPEKGCLLIA-TEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM 169
D A H G LL+A T+ L+ F R+VI ++ G G++LNR S ++
Sbjct: 9 DFVAPAAHRVRAGTLLLANTDLLEPT--FRRSVIYVVEHNDGGTLGVVLNRASETAVY-- 64
Query: 170 RSTVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK 225
VL + +P ++ GGP+ + L L + + G D G+ G
Sbjct: 65 --NVLPQWAKLAAKPKTMYVGGPVKRDAALCLATVRVGVDPSAVPGLRH------VQGRV 116
Query: 226 ETVGCAAEMVKRNAVGP--EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESG 283
V AE +++ P E R F G GW QL EI W V + PS + +E
Sbjct: 117 AMVDLDAE---PDSIAPAVEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVEP- 172
Query: 284 TLGLWEELL 292
+ LW +L
Sbjct: 173 HVDLWARIL 181
>gi|333922217|ref|YP_004495798.1| hypothetical protein AS9A_4566 [Amycolicicoccus subflavus DQS3-9A1]
gi|333484438|gb|AEF42998.1| hypothetical protein AS9A_4566 [Amycolicicoccus subflavus DQS3-9A1]
Length = 201
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 75/181 (41%), Gaps = 27/181 (14%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
+ G LL+A+ L F RTVI ++ G G++LNR S ++ VL +
Sbjct: 19 KPGSLLLASTDLLE-PTFRRTVIYVIEHNESGSLGVVLNRASETAVH----NVLPQWTSL 73
Query: 181 SDRP--LFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
S RP LF GGP++ + V ++G +EG+ V M+ +
Sbjct: 74 SARPKALFIGGPVKRDSAICL------GVLRAGTHIDGLEGI-----RAVEGRVVMIDLD 122
Query: 239 AVGPED-------FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEEL 291
A PED R F G GW QL+ E+ W V P+ + L LW +
Sbjct: 123 A-DPEDMAPVLTGLRIFVGYAGWTTGQLDSELARDDWMVMPSLPADV-LAPARADLWGRV 180
Query: 292 L 292
L
Sbjct: 181 L 181
>gi|254367861|ref|ZP_04983881.1| hypothetical protein FTHG_01152 [Francisella tularensis subsp.
holarctica 257]
gi|134253671|gb|EBA52765.1| hypothetical protein FTHG_01152 [Francisella tularensis subsp.
holarctica 257]
Length = 194
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LD 175
+++ K +L+AT + +F ++V+ + + G G+I+N+P ++K++ + +
Sbjct: 1 MYQNHKSEILLATPLIKDDIVFTKSVVYLCQNDRNGAMGLIINKPLADTLKDVFEELHIP 60
Query: 176 AAGTFS---DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAA 232
TF + PL+ GGP+ ++ G + + EGL ++
Sbjct: 61 HTNTFKEILEYPLYMGGPISPHKIMILHTTNGRNYTSTIKLD---EGL--AITASIDILE 115
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
++ N + PE F G W QL +EI++ W V
Sbjct: 116 DIA--NNILPEYFLPVVGYSCWTANQLTDEIKSNDWIVT 152
>gi|418746510|ref|ZP_13302833.1| hypothetical protein LEP1GSC163_1627 [Leptospira santarosai str.
CBC379]
gi|410792490|gb|EKR90422.1| hypothetical protein LEP1GSC163_1627 [Leptospira santarosai str.
CBC379]
Length = 182
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 14/176 (7%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ E G +LI+ + + F +TVIL++ + G G++LN+ + I ++ + D
Sbjct: 1 MEETYNGKILISNSSI-VMDYFNQTVILMVEHDNQGAFGLVLNKKQEVPIGDVIQGIPDR 59
Query: 177 AGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
P++ GGP++ +S +++ + G+ +V+ GLY + E++K
Sbjct: 60 VS--RTLPIYSGGPVDPT--FISVMHEDNKISQPGI--EVIPGLYLA--RSFDTLLELLK 111
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+ F + G GW QL E+ W + + I L W+E L
Sbjct: 112 STS----KFHVYQGYSGWGAGQLETEMNRRSWVIHEATKDFI-LNQDPETTWQEAL 162
>gi|78065436|ref|YP_368205.1| hypothetical protein Bcep18194_A3962 [Burkholderia sp. 383]
gi|119391990|sp|Q39J05.1|Y3962_BURS3 RecName: Full=UPF0301 protein Bcep18194_A3962
gi|77966181|gb|ABB07561.1| protein of unknown function DUF179 [Burkholderia sp. 383]
Length = 192
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 30/154 (19%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGPL--E 192
F TV+ + G G+++NRP+ + ++ + + + LD P++FGGP+ E
Sbjct: 26 FSGTVVYLCDHSERGALGLVINRPTDIDLESLFNRIDLKLDIEPLLH-IPVYFGGPVQTE 84
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV--------GPED 244
G L P +EG + + +V EM V GP+
Sbjct: 85 RGFVLHEP----------------VEGASYNSSMSVEGGLEMTTSKDVLEAVATGTGPKR 128
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
F G GW QL EEI W A P ++
Sbjct: 129 FLLTLGHAGWGAGQLEEEISRNGWLTVAADPRIV 162
>gi|167563837|ref|ZP_02356753.1| hypothetical protein BoklE_14880 [Burkholderia oklahomensis EO147]
gi|167570976|ref|ZP_02363850.1| hypothetical protein BoklC_14110 [Burkholderia oklahomensis C6786]
gi|167580845|ref|ZP_02373719.1| hypothetical protein BthaT_22000 [Burkholderia thailandensis TXDOH]
gi|167618947|ref|ZP_02387578.1| hypothetical protein BthaB_21729 [Burkholderia thailandensis Bt4]
gi|257138191|ref|ZP_05586453.1| hypothetical protein BthaA_03092 [Burkholderia thailandensis E264]
gi|118573935|sp|Q2SYJ1.2|Y1462_BURTA RecName: Full=UPF0301 protein BTH_I1462
Length = 192
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 59/153 (38%), Gaps = 28/153 (18%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPL--EE 193
F TV+ + G G+++NRP+ + ++ + R + P++FGGP+ E
Sbjct: 26 FSGTVVYLCDHSERGALGLVINRPTDIDLESLFNRIDLKLEIEPLLHIPVYFGGPVQTER 85
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV--------GPEDF 245
G L P +EG + + TV EM V GP+ F
Sbjct: 86 GFVLHEP----------------VEGSSYNSSMTVEGGLEMTTSKDVLEAVATGTGPKRF 129
Query: 246 RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW QL EEI W A P ++
Sbjct: 130 LLTLGHAGWGAGQLEEEISKNGWLTVAADPRIV 162
>gi|115350791|ref|YP_772630.1| hypothetical protein Bamb_0737 [Burkholderia ambifaria AMMD]
gi|170698782|ref|ZP_02889846.1| protein of unknown function DUF179 [Burkholderia ambifaria
IOP40-10]
gi|172059814|ref|YP_001807466.1| hypothetical protein BamMC406_0754 [Burkholderia ambifaria MC40-6]
gi|122323879|sp|Q0BHS7.1|Y737_BURCM RecName: Full=UPF0301 protein Bamb_0737
gi|226708065|sp|B1YU27.1|Y754_BURA4 RecName: Full=UPF0301 protein BamMC406_0754
gi|115280779|gb|ABI86296.1| protein of unknown function DUF179 [Burkholderia ambifaria AMMD]
gi|170136339|gb|EDT04603.1| protein of unknown function DUF179 [Burkholderia ambifaria
IOP40-10]
gi|171992331|gb|ACB63250.1| protein of unknown function DUF179 [Burkholderia ambifaria MC40-6]
Length = 192
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 30/154 (19%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGPL--E 192
F TV+ + G G+++NRP+ + ++ + + + LD P++FGGP+ E
Sbjct: 26 FSGTVVYLCDHSERGALGLVINRPTDIDLESLFNRIDLKLDIEPLLH-IPVYFGGPVQTE 84
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV--------GPED 244
G L P +EG + + +V EM V GP+
Sbjct: 85 RGFVLHEP----------------VEGANYNSSMSVEGGLEMTTSKDVLEAVATGTGPKR 128
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
F G GW QL EEI W A P ++
Sbjct: 129 FLLTLGHAGWGAGQLEEEISRNGWLTVAADPRIV 162
>gi|254819075|ref|ZP_05224076.1| hypothetical protein MintA_04068 [Mycobacterium intracellulare ATCC
13950]
gi|379744766|ref|YP_005335587.1| hypothetical protein OCU_00460 [Mycobacterium intracellulare ATCC
13950]
gi|378797130|gb|AFC41266.1| hypothetical protein OCU_00460 [Mycobacterium intracellulare ATCC
13950]
Length = 202
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 22/180 (12%)
Query: 104 PPQNSLGDKWAHTIHEPEKGCLLIA-TEKLDGVHIFERTVILILSMEPMGPSGIILNRPS 162
PP D A G LL+A T+ L+ F R+VI I+ G G++LNR S
Sbjct: 3 PPPEDPEDYVAPAAQRVRAGTLLLANTDLLEPT--FRRSVIYIVEHNDGGTLGVVLNRAS 60
Query: 163 LMSIKEMRSTVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVME 218
++ VL S +P +F GGP+ + L L + + G D G+
Sbjct: 61 ETAVH----NVLPQWTNLSAKPKTMFIGGPVKRDAALCLATLRVGADPHDVPGLRH---- 112
Query: 219 GLYFGTKETVGCAAEMVKRNAVGP--EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPS 276
G V A+ +A+ P E R F G GW QL EI W V + PS
Sbjct: 113 --VDGRVVMVDLDAD---PDAIAPLVEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPS 167
>gi|254246159|ref|ZP_04939480.1| hypothetical protein BCPG_00889 [Burkholderia cenocepacia PC184]
gi|124870935|gb|EAY62651.1| hypothetical protein BCPG_00889 [Burkholderia cenocepacia PC184]
Length = 214
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 30/154 (19%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGPL--E 192
F TV+ + G G+++NRP+ + ++ + + + LD P++FGGP+ E
Sbjct: 48 FSGTVVYLCDHSERGALGLVINRPTDIDLESLFNRIDLKLDIE-PLLHIPVYFGGPVQTE 106
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV--------GPED 244
G L P +EG + + +V EM V GP+
Sbjct: 107 RGFVLHEP----------------VEGASYNSSMSVDGGLEMTTSKDVLEAVATGTGPKR 150
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
F G GW QL EEI W A P ++
Sbjct: 151 FLLTLGHAGWGAGQLEEEIARNGWLTVAADPRIV 184
>gi|406597807|ref|YP_006748937.1| transcriptional regulator [Alteromonas macleodii ATCC 27126]
gi|407684819|ref|YP_006799993.1| transcriptional regulator [Alteromonas macleodii str. 'English
Channel 673']
gi|407688744|ref|YP_006803917.1| transcriptional regulator [Alteromonas macleodii str. 'Balearic Sea
AD45']
gi|406375128|gb|AFS38383.1| transcription regulator [Alteromonas macleodii ATCC 27126]
gi|407246430|gb|AFT75616.1| transcription regulator [Alteromonas macleodii str. 'English
Channel 673']
gi|407292124|gb|AFT96436.1| transcription regulator [Alteromonas macleodii str. 'Balearic Sea
AD45']
Length = 188
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 18/150 (12%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD-- 182
L+A LD + F R++I I G GI++N+PS M++K++ D T SD
Sbjct: 11 FLVAMPSLDDPY-FSRSLIYICEHNAEGAMGIVVNQPSTMNVKQLLEQT-DKELTVSDDK 68
Query: 183 --RPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
+ + GGP+ E G L S + E S ++ G+ T + + A N
Sbjct: 69 AEQIVLAGGPVSQERGFVLHSSQ---REWASS---LKLAPGVMVTTSKDILTAI----AN 118
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYW 268
GPED G GW QL +E++ W
Sbjct: 119 DEGPEDVLIALGYAGWTAGQLEKEMQENAW 148
>gi|399021603|ref|ZP_10723697.1| putative transcriptional regulator [Herbaspirillum sp. CF444]
gi|398090947|gb|EJL81402.1| putative transcriptional regulator [Herbaspirillum sp. CF444]
Length = 232
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 62/154 (40%), Gaps = 22/154 (14%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIK----------EMRSTVLDAAGTFSDRPLF 186
IF TV+ + G G+++N+P+ M++ E+ DA P+
Sbjct: 59 IFGGTVVYLCEHNQNGALGVVINKPTDMTMDVLFDRINLKLEIIHDSPDAVPELYRSPVM 118
Query: 187 FGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPED 244
FGGP+ E G L + + + QV +G+ T + V A + GP+
Sbjct: 119 FGGPVQVERGFVLHT------AMSQFSSTLQVTDGISLTTSKDVLEAVA----HGDGPQQ 168
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GC GW QL +E+ W PS+I
Sbjct: 169 VLVSLGCSGWSAGQLEDELARNGWLTVKADPSII 202
>gi|374263535|ref|ZP_09622083.1| transcriptional regulator [Legionella drancourtii LLAP12]
gi|363536125|gb|EHL29571.1| transcriptional regulator [Legionella drancourtii LLAP12]
Length = 187
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 17/151 (11%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAAGT-FSD 182
LLIA L + FE+TVI + G G+I+NRP S+ + + +D S
Sbjct: 11 LLIAMPSLHDPN-FEKTVIYVCEHREEGSVGLIINRPMQFSLSIVFEQLEIDPIRVEQSH 69
Query: 183 RPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA-- 239
PL FGGP++ E F+V + G + L+ TV + ++++ A
Sbjct: 70 LPLMFGGPIQPERGFVVHKQSG-----------EWRSSLFLQEDVTVTTSNDIIRAIAED 118
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270
GP++ G GW + QL EI W V
Sbjct: 119 KGPKEVLVTLGYSGWVENQLEREIMDNVWLV 149
>gi|83719645|ref|YP_442008.1| hypothetical protein BTH_I1462 [Burkholderia thailandensis E264]
gi|83653470|gb|ABC37533.1| Uncharacterized ACR, COG1678 [Burkholderia thailandensis E264]
Length = 207
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 59/153 (38%), Gaps = 28/153 (18%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPL--EE 193
F TV+ + G G+++NRP+ + ++ + R + P++FGGP+ E
Sbjct: 41 FSGTVVYLCDHSERGALGLVINRPTDIDLESLFNRIDLKLEIEPLLHIPVYFGGPVQTER 100
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV--------GPEDF 245
G L P +EG + + TV EM V GP+ F
Sbjct: 101 GFVLHEP----------------VEGSSYNSSMTVEGGLEMTTSKDVLEAVATGTGPKRF 144
Query: 246 RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW QL EEI W A P ++
Sbjct: 145 LLTLGHAGWGAGQLEEEISKNGWLTVAADPRIV 177
>gi|15805386|ref|NP_294080.1| hypothetical protein DR_0357 [Deinococcus radiodurans R1]
gi|6458034|gb|AAF09937.1|AE001896_2 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 191
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 22/148 (14%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
L+A+ L G FE V+L+L + G G++++ P+ ++ E+ +
Sbjct: 22 TFLVASPHLQG-SFFEGAVVLLLEHDAQGAMGLMVHLPAGPTVAELLPDLAQ-----EQA 75
Query: 184 PLFFGGPLEEGL---FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
P++ GGP++ L +P G EV Q+ EGL + + V +
Sbjct: 76 PVWLGGPVDPSLGWCLYRAPVGLEGEV-------QLTEGLMVSSSQDV------LHAVIA 122
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYW 268
G + + G GW QL EE R G W
Sbjct: 123 GGQRYMLVLGYAGWAAGQLTEEARVGTW 150
>gi|392374769|ref|YP_003206602.1| hypothetical protein DAMO_1713 [Candidatus Methylomirabilis
oxyfera]
gi|258592462|emb|CBE68771.1| conserved exported protein of unknown function [Candidatus
Methylomirabilis oxyfera]
Length = 238
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 80/187 (42%), Gaps = 27/187 (14%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRP-SLMSIKEMRSTV-LDAAGTF 180
G LL+A ++L F +VI ++ + G G+I+NRP +S+ E+ L+ G
Sbjct: 70 GQLLVARDELRDPR-FVHSVIYVVHHDAGGAMGLIVNRPIGEVSLSELLEQAGLEHTGIK 128
Query: 181 SDRPLFFGGPLEEGLFLVSPKGG----GDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
+ FGGP+E G V G EV + G+ V +E+++
Sbjct: 129 GKIRVHFGGPVEPGQGFVLHTADYTIEGTEVIEGGI--------------AVTARSEILR 174
Query: 237 RNAVG--PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWL 294
A G P F G GW QL+ EI+AG W + ++ E+ WE
Sbjct: 175 AIATGTGPRQSLFALGYAGWAPGQLDAEIKAGAWEIVPADKMLVFDENADTK-WER---A 230
Query: 295 MGRRKVW 301
M RR ++
Sbjct: 231 MARRTLY 237
>gi|253690073|ref|YP_003019263.1| hypothetical protein PC1_3712 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259647011|sp|C6DFI8.1|Y3712_PECCP RecName: Full=UPF0301 protein PC1_3712
gi|251756651|gb|ACT14727.1| protein of unknown function DUF179 [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 187
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 22/152 (14%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F+R+V+ I G G+I+N+P +++ ++ T D A D+P+F GG
Sbjct: 18 VFKRSVVYICEHNEDGAMGLIINKPMDQFSVENVLKKLKIDPTPRDPAIRL-DKPVFMGG 76
Query: 190 PL--EEGLFLVSP-KGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFR 246
PL + G L +P G G + S E M ET+G ++ PE+
Sbjct: 77 PLADDRGFILHTPCPGFGSSISIS---EDTMITTSKDVLETLGTPSQ--------PENTL 125
Query: 247 FFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G WE QL EE+ W ++
Sbjct: 126 VALGYSAWENGQLEEELLENAWLTTPADKDIL 157
>gi|455789165|gb|EMF41098.1| hypothetical protein LEP1GSC067_2647 [Leptospira interrogans
serovar Lora str. TE 1992]
Length = 182
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ E G +LI+ + + F +TVIL++ + G G++LN+ SI E+ + D
Sbjct: 1 MEENYSGKILISNSSI-VMDYFNQTVILMVEHDNQGAFGLVLNKRQEASIGEVIQGIPDH 59
Query: 177 AGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
+ ++ GGP++ +S +++ + G+ +++ GLY + E++K
Sbjct: 60 VS--RNLLIYSGGPVDPT--FISVLHEDNKISQPGI--EIIPGLYLA--RSFDTLLELLK 111
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
++ F F G GW QL E+ W + S + L W+E L
Sbjct: 112 SSS----KFHVFQGYSGWGAGQLETEMNRKSWVIHEASKDFV-LNQDPETTWQEAL 162
>gi|307543648|ref|YP_003896127.1| transcriptional regulator [Halomonas elongata DSM 2581]
gi|307215672|emb|CBV40942.1| K07735 putative transcriptional regulator [Halomonas elongata DSM
2581]
Length = 185
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 11/144 (7%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS---DRPLFFGGPLEEG 194
F T+ + + G G+I+NRP +++ + L+ G+ S + P+++GGP +
Sbjct: 20 FAGTLSYLCDYDEKGTMGVIVNRPLELTLDALFEQ-LELEGSDSPHRNVPVYYGGPTHKD 78
Query: 195 LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGW 254
+ +GG ++ S QV + + T + A V R GPE F GC GW
Sbjct: 79 RGFILHEGGSEDWDSS---LQVADDIALTTSMDI-LQALAVGR---GPERFLVCLGCAGW 131
Query: 255 EKEQLNEEIRAGYWTVAACSPSVI 278
E QL E++ W ++
Sbjct: 132 ESGQLESELKDNAWLTVEGRADIL 155
>gi|410862669|ref|YP_006977903.1| transcriptional regulator [Alteromonas macleodii AltDE1]
gi|410819931|gb|AFV86548.1| transcription regulator [Alteromonas macleodii AltDE1]
Length = 208
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 18/180 (10%)
Query: 94 SVDPDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGP 153
SV AA+N+ Q ++ T + + L+A LD + F R++I + G
Sbjct: 2 SVQNAAAINW--QRKTNERRFMTELKSLQNHFLVAMPSLDDPY-FSRSLIYVCEHNVEGA 58
Query: 154 SGIILNRPSLMSIKEMRSTVLDAAGTFSDRP---LFFGGPL--EEGLFLVSPKGGGDEVG 208
GI++N+PS M++K++ A D+ + GGP+ E G L S + E
Sbjct: 59 MGIVVNQPSTMNVKQLLEQTDKALMVSDDKAEQIVLAGGPVNQERGFVLHSSQ---KEWA 115
Query: 209 KSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYW 268
S ++ G+ T + + A N GP+D G GW QL +E++ W
Sbjct: 116 SS---LKLAPGVMVTTSKDILTAI----ANDEGPDDVLIALGYAGWTAGQLEKEMQENAW 168
>gi|440759967|ref|ZP_20939085.1| UPF0301 protein YqgE [Pantoea agglomerans 299R]
gi|436426305|gb|ELP24024.1| UPF0301 protein YqgE [Pantoea agglomerans 299R]
Length = 198
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 14/147 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRP--SLMS---IKEMRSTVLDAAGTFS-DRPLFFGGPL 191
F+R+V+ + G G+I+N+P +L +K+++ + D + D+P+F GGPL
Sbjct: 30 FKRSVVYVCEHNEEGAMGLIINKPMENLTVEGILKKLKISAEDRDPSIKLDKPVFTGGPL 89
Query: 192 EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGC 251
E + V + + E++G A++ P + G
Sbjct: 90 AEDRGFILHSAQRTFTSSIRVSDNTIITTSRDVLESIGTASQ--------PTNVLVALGY 141
Query: 252 CGWEKEQLNEEIRAGYWTVAACSPSVI 278
C WEK+QL E+ W + +++
Sbjct: 142 CAWEKDQLENELMENAWLTTPANSNIL 168
>gi|392308139|ref|ZP_10270673.1| hypothetical protein PcitN1_05703 [Pseudoalteromonas citrea NCIMB
1889]
Length = 185
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGPL--E 192
F++TV I G G+++N P +++ E+ + D + + + + +F GGP+ +
Sbjct: 20 FKQTVTYICEHNEDGAMGLVVNHPIDVTVGELLDKIDIDNDKSNSSAQQQVFAGGPVHTD 79
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
G L +PK G +++ + T + V A + N+ P+ F G
Sbjct: 80 RGFVLHTPKPGYSSS------QELSSDIMITTSKDV--LASLTTNNS--PDSFLITLGYA 129
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GWE+ QL E+ W V +I ++ WE+ + ++G
Sbjct: 130 GWERGQLELELLENSWLVIEAQSGII-FDTPPEKRWEKAVQMLG 172
>gi|348617897|ref|ZP_08884431.1| conserved hypothetical protein, DUF179 domain [Candidatus
Glomeribacter gigasporarum BEG34]
gi|347816841|emb|CCD29085.1| conserved hypothetical protein, DUF179 domain [Candidatus
Glomeribacter gigasporarum BEG34]
Length = 191
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 62/158 (39%), Gaps = 14/158 (8%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSD 182
LIA +D F TV+ + G G+++NRP+ +++ + R +
Sbjct: 14 FLIAMPGMDDA-AFSGTVVYLCDHSERGALGLVINRPTDINLGSLFRRIDLKLEIQPLQK 72
Query: 183 RPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
P++FGGP+ E G L + V GL T + V E V R
Sbjct: 73 MPVYFGGPVQTERGFVLHESTNA-----QYTYLMSVPGGLSMTTSKDV---LEAVARGK- 123
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GPE F G WE QL EEI W P +I
Sbjct: 124 GPEKFLLTLGHAAWEAGQLEEEISHNGWLNVEADPKII 161
>gi|440739306|ref|ZP_20918823.1| hypothetical protein A986_13512 [Pseudomonas fluorescens BRIP34879]
gi|440379849|gb|ELQ16431.1| hypothetical protein A986_13512 [Pseudomonas fluorescens BRIP34879]
Length = 189
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 138 FERTVILILSMEPMGPSGIILNRP---SLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEG 194
F +T+ I+ G G+++NRP +L I E +D + P++ GGP++
Sbjct: 25 FAQTLTYIVEHTANGVMGLVVNRPQELNLSDILEQLRPEIDPPSSCQSVPIYIGGPVQTD 84
Query: 195 L-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
F++ P G + ++G+ T + V A + VGPE G G
Sbjct: 85 RGFVLHPTGPTFQATVD------LDGVSLSTSQDVLFAIA----DGVGPEQSVIALGYAG 134
Query: 254 WEKEQLNEEIRAGYW 268
WE QL E+ + W
Sbjct: 135 WEAGQLEAELASNAW 149
>gi|448746101|ref|ZP_21727771.1| Protein of unknown function DUF179 [Halomonas titanicae BH1]
gi|445566829|gb|ELY22935.1| Protein of unknown function DUF179 [Halomonas titanicae BH1]
Length = 197
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR--PLFFGGPLEEGL 195
F ++I + + G G+I NRP ++++ + + T R P+++GGP+ +
Sbjct: 32 FAGSLIYLCDHDNNGCMGVITNRPLEITLEALFDQLELGGETSPHRNAPVYYGGPMHKDR 91
Query: 196 FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWE 255
+ G + S QV +G+ T + A + GPE F GC GWE
Sbjct: 92 GFILHVGDSQQWDSS---IQVEDGIALTTSLDILQAFAAGE----GPEHFLVCLGCAGWE 144
Query: 256 KEQLNEEIRAGYWTVAACSPSVI 278
QL EE++ W +V+
Sbjct: 145 VGQLEEELKENSWLTVEAESNVL 167
>gi|357399571|ref|YP_004911496.1| hypothetical protein SCAT_1972 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337765980|emb|CCB74691.1| conserved protein of unknown function [Streptomyces cattleya NRRL
8057 = DSM 46488]
Length = 194
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 75/175 (42%), Gaps = 14/175 (8%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + ++ AG
Sbjct: 9 GRLLVATPSLADPN-FDRAVVLLLDHDEEGTLGVVLNRPTPVGVGDVLEPWARLAGV--P 65
Query: 183 RPLFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+ +F GGP L+ L L V P G+ G G + + + +G
Sbjct: 66 QVVFQGGPVSLDSALGLAVVP---GEAPGGEGAPAEPLG--WRRVHGAIGLVDLEAPPEL 120
Query: 240 VGPE--DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+ E R F G GW QL +E+ G W V P I GLW +L
Sbjct: 121 LAAELGSLRIFAGYAGWGPGQLEDELVEGAWYVVESEPGDIS-SPAPEGLWRSVL 174
>gi|116329208|ref|YP_798928.1| transcriptional regulator [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116330185|ref|YP_799903.1| transcriptional regulator [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116121952|gb|ABJ79995.1| Transcriptional regulator [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116123874|gb|ABJ75145.1| Transcriptional regulator [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 182
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 75/176 (42%), Gaps = 14/176 (7%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ E G +LI+ + + F +TVIL++ + G G++LN+ I ++ + D
Sbjct: 1 MEETYNGKILISNSSI-VMDYFNQTVILMVEHDNQGAFGLVLNKKQKAFIGDVIQGIPDH 59
Query: 177 AGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
P++ GGP++ +S ++ + G+ +V+ GLY + E++K
Sbjct: 60 VS--HTLPIYSGGPVDPT--FISVLHEDKKISQPGI--EVIPGLYLA--RSYDTLLELLK 111
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+ F + G GW QL E+ W V + + L W+E L
Sbjct: 112 STS----KFHVYQGYSGWSAGQLETEMNRKSWVVHEATKDFV-LNQDPETTWQEAL 162
>gi|317049425|ref|YP_004117073.1| hypothetical protein Pat9b_3221 [Pantoea sp. At-9b]
gi|316951042|gb|ADU70517.1| protein of unknown function DUF179 [Pantoea sp. At-9b]
Length = 187
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 26/153 (16%)
Query: 138 FERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGGP 190
F+R+V+ I G G+I+N+P ++ ++ + D A D+P+F GGP
Sbjct: 19 FKRSVVYICEHNEDGAMGLIINKPMENLTVEGILKKLKISPSDRDPAIRL-DKPVFAGGP 77
Query: 191 LEE--GLFLVSPK---GGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDF 245
L E G L S + + + V + L E +G +A+ PE
Sbjct: 78 LAEDRGFILHSAQRVYSSSIRISDTTVITTSRDVL-----EAIGSSAQ--------PEHV 124
Query: 246 RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G C WEK+QL E+ W S +++
Sbjct: 125 LVALGYCAWEKDQLENELLENAWLTTPASSTIL 157
>gi|189459401|ref|ZP_03008186.1| hypothetical protein BACCOP_00022 [Bacteroides coprocola DSM 17136]
gi|189433858|gb|EDV02843.1| putative ACR, COG1678 [Bacteroides coprocola DSM 17136]
Length = 196
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 74/181 (40%), Gaps = 33/181 (18%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P G +LIA+ L H F R+V+L+++ G GI++N+ I + ++ T
Sbjct: 15 PHTGSILIASPLLYDYH-FARSVVLMITHNSEGSMGIVMNKDFRYHIS--LNQLVPNLET 71
Query: 180 FSDRPLFFGGPLEEG--LFLVS--------PKGGGDEVGKSGVFEQVMEGLYFGTKETVG 229
P++ GGP++ FL + P G G + +G FE+V + + G
Sbjct: 72 APLIPVYKGGPVDRSTIFFLHTLPDLEGSFPLGNG--LFLNGDFERVQQYILAGNPIE-- 127
Query: 230 CAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA-ACSPSVIGLESGTLGLW 288
RFF G GW QL +EI W + C + LE LW
Sbjct: 128 -------------GHIRFFAGYAGWNNTQLQKEINEDSWIIGETCKQHL--LEENYRELW 172
Query: 289 E 289
+
Sbjct: 173 Q 173
>gi|379752058|ref|YP_005340730.1| hypothetical protein OCO_00450 [Mycobacterium intracellulare
MOTT-02]
gi|379759482|ref|YP_005345879.1| hypothetical protein OCQ_00450 [Mycobacterium intracellulare
MOTT-64]
gi|406028224|ref|YP_006727113.1| hypothetical protein MIP_00058 [Mycobacterium indicus pranii MTCC
9506]
gi|378802274|gb|AFC46409.1| hypothetical protein OCO_00450 [Mycobacterium intracellulare
MOTT-02]
gi|378807424|gb|AFC51558.1| hypothetical protein OCQ_00450 [Mycobacterium intracellulare
MOTT-64]
gi|405126771|gb|AFS12026.1| Hypothetical protein MIP_00058 [Mycobacterium indicus pranii MTCC
9506]
Length = 201
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 22/180 (12%)
Query: 104 PPQNSLGDKWAHTIHEPEKGCLLIA-TEKLDGVHIFERTVILILSMEPMGPSGIILNRPS 162
PP D A G LL+A T+ L+ F R+VI I+ G G++LNR S
Sbjct: 2 PPPEDPEDYVAPAAQRVRAGTLLLANTDLLEPT--FRRSVIYIVEHNDGGTLGVVLNRAS 59
Query: 163 LMSIKEMRSTVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVME 218
++ VL S +P +F GGP+ + L L + + G D G+
Sbjct: 60 ETAVY----NVLPQWTNLSAKPKTMFIGGPVKRDAALCLATLRVGADPHDVPGLRH---- 111
Query: 219 GLYFGTKETVGCAAEMVKRNAVGP--EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPS 276
G V A+ +A+ P E R F G GW QL EI W V + PS
Sbjct: 112 --VDGRVVMVDLDAD---PDAIAPLVEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPS 166
>gi|359686397|ref|ZP_09256398.1| transcriptional regulator [Leptospira santarosai str. 2000030832]
gi|418752345|ref|ZP_13308612.1| hypothetical protein LEP1GSC179_2203 [Leptospira santarosai str.
MOR084]
gi|421110352|ref|ZP_15570850.1| hypothetical protein LEP1GSC071_0648 [Leptospira santarosai str.
JET]
gi|409967340|gb|EKO35170.1| hypothetical protein LEP1GSC179_2203 [Leptospira santarosai str.
MOR084]
gi|410804277|gb|EKS10397.1| hypothetical protein LEP1GSC071_0648 [Leptospira santarosai str.
JET]
Length = 182
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 14/176 (7%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ E G +LI+ + + F +TVIL++ + G G++LN+ + I ++ + D
Sbjct: 1 MEETYNGKILISNSSI-VMDYFNQTVILMVEHDNQGAFGLVLNKKQEVPIGDVIQGIPDR 59
Query: 177 AGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
P++ GGP++ +S +++ + G+ +V+ GLY + E++K
Sbjct: 60 VS--RTLPIYSGGPVDPT--FISVMHEDNKISQPGI--EVIPGLYLA--RSFDTLLELLK 111
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+ F + G GW QL E+ W + + + L W+E L
Sbjct: 112 STS----KFHVYQGYSGWGAGQLETEMNRRSWVIHEATKDFV-LNQDPETTWQEAL 162
>gi|350563522|ref|ZP_08932343.1| protein of unknown function DUF179 [Thioalkalimicrobium aerophilum
AL3]
gi|349778657|gb|EGZ33008.1| protein of unknown function DUF179 [Thioalkalimicrobium aerophilum
AL3]
Length = 195
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 64/164 (39%), Gaps = 23/164 (14%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAAGTFSDR 183
+LIA LD FE+TVI I +G++LN+P + ++ AG+ R
Sbjct: 15 ILIANPSLDNS-WFEKTVIYIAEDSDQQTTGLVLNKPHQFKVSDLLDYFSFSPAGSAETR 73
Query: 184 P-----LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETV--GCAAEM 234
P + GGP+ E G L + + +GL T E AA+
Sbjct: 74 PELGEHVRLGGPVDKEHGFILHRHRNNWPNSIN------LDDGLVLSTSEAFLKAIAADE 127
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+R + F G W QL EEI+ W P+++
Sbjct: 128 AER------PYLVFLGVASWHPGQLTEEIQRNSWLTCPYDPAIV 165
>gi|335041816|ref|ZP_08534843.1| putative transcriptional regulator [Methylophaga aminisulfidivorans
MP]
gi|333788430|gb|EGL54312.1| putative transcriptional regulator [Methylophaga aminisulfidivorans
MP]
Length = 186
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 23/146 (15%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRS--TVLDAAGTFSDRPLFFGGPLEEGL 195
F R+VI + + G G+I+NRP+ + ++E+ S + + + + + P+ FGGP+++G
Sbjct: 21 FYRSVIYLCEHDKNGAMGLIINRPTRVMLEELLSHLHIENPSESIKNTPVLFGGPVQKGQ 80
Query: 196 FLV------SPKGGGDEVGKSGVFEQVMEGL-YFGTKETVGCAAEMVKRNAVGPEDFRFF 248
+V SP ++ + + L GT E GP +
Sbjct: 81 GMVIHDQAQSPWKSSLQLSDDVILTTSTDILEAIGTDE--------------GPSNALVT 126
Query: 249 DGCCGWEKEQLNEEIRAGYWTVAACS 274
G GW QL EE+ W S
Sbjct: 127 LGYAGWSAGQLEEELMENSWLTVPAS 152
>gi|269101818|ref|ZP_06154515.1| hypothetical protein VDA_001234 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161716|gb|EEZ40212.1| hypothetical protein VDA_001234 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 187
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 60/160 (37%), Gaps = 15/160 (9%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRP 184
LIA L +FE+TVI I G G+I+N+ +SI EM + +P
Sbjct: 7 FLIAMPSLQQT-LFEKTVIYICEHNEDGAMGVIINQSVDVSIAEMFEKIEVEPSYLITQP 65
Query: 185 ------LFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
+ GGP+ E V G + + +Q+ +G +
Sbjct: 66 SKLTAQVLNGGPVSEDRGFVLHSGHHNYTSSILITDQLALTTSLDVLSELGSSQ------ 119
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GP+ F G GW+ QL +E+ W P +I
Sbjct: 120 --GPQQFLVALGYAGWDAGQLEQELAENSWLTVEADPEII 157
>gi|294055975|ref|YP_003549633.1| hypothetical protein [Coraliomargarita akajimensis DSM 45221]
gi|293615308|gb|ADE55463.1| protein of unknown function DUF179 [Coraliomargarita akajimensis
DSM 45221]
Length = 193
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 20/158 (12%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPM-GPSGIILNRPSLMSIKEMRSTVLDAAG 178
P G LL+A L + F R+V+L+ + EP G G+I+NRP ++ E L+ G
Sbjct: 17 PMAGALLLAHPTLLDPN-FRRSVVLLTAHEPKEGSLGVIVNRPMGKTLGEYD---LELNG 72
Query: 179 T-FSDRPLFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
+ + PL+ GGP+ + L L + K D+ G F+ LYFG +
Sbjct: 73 SELASVPLYHGGPVAADQLILAAWKWVPDD----GTFK-----LYFGIDADKARSLMQKD 123
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACS 274
R R F G GW QL+ E+ W V+ +
Sbjct: 124 RRY----QLRGFVGHSGWSAGQLDAELDQESWLVSPLA 157
>gi|325981452|ref|YP_004293854.1| hypothetical protein NAL212_0755 [Nitrosomonas sp. AL212]
gi|325530971|gb|ADZ25692.1| protein of unknown function DUF179 [Nitrosomonas sp. AL212]
Length = 187
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 56/150 (37%), Gaps = 22/150 (14%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKEM-RSTVLDAAGTFSDR-PLFFGGP--LE 192
IF +T+ + G GI++NRP+ M++ + R + + + ++ P+ FGGP L+
Sbjct: 21 IFSKTLTYVCEHNEQGALGIVINRPTDMTLVNLFRQLSISSTDSLAESTPVLFGGPVQLD 80
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM----VKRNAVGPEDFRFF 248
G L P G + VG M NA GP
Sbjct: 81 CGFVLHRPVGSWQST--------------LSVNQEVGLTTSMDILKAIANAEGPSQALIA 126
Query: 249 DGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW Q+ E+ W S VI
Sbjct: 127 MGYAGWAAGQIEHELAQNAWLTVPASIDVI 156
>gi|386355610|ref|YP_006053856.1| hypothetical protein SCATT_19630 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|365806118|gb|AEW94334.1| hypothetical protein SCATT_19630 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 196
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 75/175 (42%), Gaps = 14/175 (8%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + ++ AG
Sbjct: 11 GRLLVATPSLADPN-FDRAVVLLLDHDEEGTLGVVLNRPTPVGVGDVLEPWARLAGV--P 67
Query: 183 RPLFFGGP--LEEGLFL-VSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+ +F GGP L+ L L V P G+ G G + + + +G
Sbjct: 68 QVVFQGGPVSLDSALGLAVVP---GEAPGGEGAPAEPLG--WRRVHGAIGLVDLEAPPEL 122
Query: 240 VGPE--DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+ E R F G GW QL +E+ G W V P I GLW +L
Sbjct: 123 LAAELGSLRIFAGYAGWGPGQLEDELVEGAWYVVESEPGDIS-SPAPEGLWRSVL 176
>gi|50083615|ref|YP_045125.1| hypothetical protein ACIAD0353 [Acinetobacter sp. ADP1]
gi|81393870|sp|Q6FF54.1|Y353_ACIAD RecName: Full=UPF0301 protein ACIAD0353
gi|49529591|emb|CAG67303.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
Length = 184
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 65/157 (41%), Gaps = 14/157 (8%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
CL+ E D F TVI + + G G+I+NRPS + ++E+ + + A
Sbjct: 10 CLIAPPEMADD--FFANTVIYLARHDDEGAQGLIINRPSGIQVRELLNDLDIEADHVQPH 67
Query: 184 PLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ GGPL E G L + G V S + V E L T + + A + VG
Sbjct: 68 EVLQGGPLRPEAGFVLHT----GQPVWHSSI--AVGENLCITTSKDILDA--IAHNEGVG 119
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
++ G W K QL EI G W + +I
Sbjct: 120 R--YQIALGYASWTKNQLEGEISRGDWLICDADMDLI 154
>gi|170725698|ref|YP_001759724.1| hypothetical protein Swoo_1337 [Shewanella woodyi ATCC 51908]
gi|226695932|sp|B1KIY1.1|Y1337_SHEWM RecName: Full=UPF0301 protein Swoo_1337
gi|169811045|gb|ACA85629.1| protein of unknown function DUF179 [Shewanella woodyi ATCC 51908]
Length = 186
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 17/153 (11%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM-RSTVLDAAG-- 178
+ LLIA L FER+VI + + G G+++NRP + + E+ + LD
Sbjct: 5 QNHLLIAMPSLQDT-FFERSVIYLCEHDEKGAMGLMINRPIGIDVNELLKQMELDEEPDP 63
Query: 179 -TFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
T + GGP+ E G L +P+ + + +++M ++G A
Sbjct: 64 ITSLGSAVLIGGPVNQERGFVLHTPQTNWN--NSQSLTDEIMLTTSRDVLTSLGTDA--- 118
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYW 268
PE+F G GW K+QL +E+ W
Sbjct: 119 -----APENFIVTLGYAGWSKDQLEQELAENTW 146
>gi|398331594|ref|ZP_10516299.1| transcriptional regulator [Leptospira alexanderi serovar Manhao 3
str. L 60]
Length = 182
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 14/176 (7%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ E G +LI+ + + F +TVIL++ + G G++LN+ + I ++ + D
Sbjct: 1 MEETYNGKILISNSSI-VMDYFNQTVILMVEHDNQGAFGLVLNKKQKVFIGDVIQGIPDH 59
Query: 177 AGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
P++ GGP++ +S +++ + G+ +V+ GLY + E++K
Sbjct: 60 VS--RTLPIYSGGPVDPT--FISVLHEDNKISQPGI--EVIPGLYLA--RSYDTLLELLK 111
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+ F + G GW QL E+ W + + + L W+E L
Sbjct: 112 SAS----KFHVYQGYSGWSAGQLETEMDRKSWVIHEATKDFV-LNQDPETTWQEAL 162
>gi|257095137|ref|YP_003168778.1| hypothetical protein CAP2UW1_3592 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047661|gb|ACV36849.1| protein of unknown function DUF179 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 186
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 10/133 (7%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPLEEGL 195
F RT++ I G G+I+NRP MS+ + + V A +F++ P+ FGGP++
Sbjct: 22 FSRTLVYIAEHNDRGALGVIVNRPIDMSLGTLLEKIDVPLEAQSFANLPVLFGGPVQTDR 81
Query: 196 FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWE 255
V + G V EQV GL +++ + A + P D G GW
Sbjct: 82 GFVLHRPIGQWQSTLPVNEQV--GLT-SSRDILQSVARHGQ-----PRDLMVTLGYAGWS 133
Query: 256 KEQLNEEIRAGYW 268
QL E+ W
Sbjct: 134 AGQLEHELAQNAW 146
>gi|260599275|ref|YP_003211846.1| hypothetical protein CTU_34830 [Cronobacter turicensis z3032]
gi|260218452|emb|CBA33581.1| UPF0301 protein ESA_00394 [Cronobacter turicensis z3032]
Length = 189
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 69/172 (40%), Gaps = 27/172 (15%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F R+V+ I G G+I+N+P ++ ++ D A D+P+F GG
Sbjct: 20 LFRRSVVYICEYNDEGAMGLIINKPLENLQVEGVLQKLKITPEPRDPAIRL-DKPVFLGG 78
Query: 190 PLEE--GLFLVSPKGG---GDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPED 244
PL E G L +P + + V + L ET+G A + P+D
Sbjct: 79 PLAEDRGFILHTPPDAFSSSIRISDNTVITTSRDVL-----ETLGTAEQ--------PDD 125
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G WEK QL EEI W A +++ + W E L+G
Sbjct: 126 VLVALGYSSWEKGQLEEEILENAWLTAPADLNIL-FRTPIADRWREAAKLIG 176
>gi|149276282|ref|ZP_01882426.1| hypothetical protein PBAL39_01142 [Pedobacter sp. BAL39]
gi|149232802|gb|EDM38177.1| hypothetical protein PBAL39_01142 [Pedobacter sp. BAL39]
Length = 168
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 21/166 (12%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEGLFL 197
F+R+V+L+ + G G ILN+ S + + ++ V + AG P++ GGP+
Sbjct: 5 FKRSVVLLTDHQEEGTVGFILNQRSTLILSDL---VPEFAGV--ALPVYIGGPVATDTLH 59
Query: 198 VSPK-----GGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
+ G EV K G+Y+G ++ ++ P + +FF G
Sbjct: 60 FIHRCYDRLNDGQEVAK---------GIYWGGN--FEALKVLLLTGSIEPAEIKFFIGYS 108
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRR 298
GW + QL E+ W V+ + + LW E + +G R
Sbjct: 109 GWSEGQLKLELEENTWMVSDRFHADVVFSDNEEELWREAVINLGPR 154
>gi|387824504|ref|YP_005823975.1| hypothetical protein FN3523_0921 [Francisella cf. novicida 3523]
gi|332183970|gb|AEE26224.1| hypothetical protein FN3523_0921 [Francisella cf. novicida 3523]
Length = 194
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 73/161 (45%), Gaps = 15/161 (9%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LD 175
+++ K +L+AT + +F ++V+ + + G G+I+N+P + ++++ + +
Sbjct: 1 MYQNHKSEILLATPLIKDDVVFTKSVVYLCQNDRHGAMGLIINKPLVDKLRDVFEELHIP 60
Query: 176 AAGTFS---DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAA 232
TF + PL+ GGP+ ++ G + + EGL + +
Sbjct: 61 HNNTFEEILEYPLYMGGPISPHKIMILHTTNGRNYSSTIKLD---EGL------AITASM 111
Query: 233 EMVKR--NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
++++ N + PE F G W QL +EI++ W V
Sbjct: 112 DILEDIANNILPEYFLPVVGYSCWTANQLTDEIKSNDWIVT 152
>gi|156932612|ref|YP_001436528.1| hypothetical protein ESA_00394 [Cronobacter sakazakii ATCC BAA-894]
gi|417789847|ref|ZP_12437455.1| hypothetical protein CSE899_04313 [Cronobacter sakazakii E899]
gi|449306936|ref|YP_007439292.1| hypothetical protein CSSP291_02025 [Cronobacter sakazakii SP291]
gi|166229059|sp|A7MJR9.1|Y394_ENTS8 RecName: Full=UPF0301 protein ESA_00394
gi|156530866|gb|ABU75692.1| hypothetical protein ESA_00394 [Cronobacter sakazakii ATCC BAA-894]
gi|333956046|gb|EGL73741.1| hypothetical protein CSE899_04313 [Cronobacter sakazakii E899]
gi|449096969|gb|AGE85003.1| hypothetical protein CSSP291_02025 [Cronobacter sakazakii SP291]
Length = 187
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 69/172 (40%), Gaps = 27/172 (15%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F R+V+ I G G+I+N+P ++ ++ D A D+P+F GG
Sbjct: 18 LFRRSVVYICEYNNEGAMGLIINKPLENLQVEGVLQKLKITPEPRDPAIRL-DKPVFLGG 76
Query: 190 PLEE--GLFLVSPKGG---GDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPED 244
PL E G L +P + + V + L ET+G A + P+D
Sbjct: 77 PLAEDRGFILHTPPDAFSSSIRISDNTVITTSRDVL-----ETLGTAEQ--------PDD 123
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G WEK QL EEI W A +++ + W E L+G
Sbjct: 124 VLVALGYSSWEKGQLEEEILENAWLTAPADLNIL-FRTPIADRWREAAKLIG 174
>gi|127512077|ref|YP_001093274.1| hypothetical protein Shew_1144 [Shewanella loihica PV-4]
gi|166228893|sp|A3QC17.1|Y1144_SHELP RecName: Full=UPF0301 protein Shew_1144
gi|126637372|gb|ABO23015.1| protein of unknown function DUF179 [Shewanella loihica PV-4]
Length = 185
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 16/152 (10%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE-MRSTVLDAAGTF 180
+ LLIA L FER+VI + G G+++NRP + + E +R LD T
Sbjct: 5 QNHLLIAMPSLKDT-FFERSVIYLCEHNEQGAMGLMINRPIGVDVNELLRQMELDDFHTI 63
Query: 181 S--DRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
+ + GGP+ E+G L +P+ + +Q+ + L T V +
Sbjct: 64 ESINSKVLVGGPVGQEKGFVLHTPQ------PQWSNSQQISDDLMLTTSRDVLTSL---- 113
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYW 268
+ PE F G GW + QL +E+ W
Sbjct: 114 GSKEAPEQFIVALGYAGWGRHQLEQELADNTW 145
>gi|33519716|ref|NP_878548.1| hypothetical protein Bfl251 [Candidatus Blochmannia floridanus]
gi|46577401|sp|Q7VRG6.1|Y251_BLOFL RecName: Full=UPF0301 protein Bfl251
gi|33504061|emb|CAD83322.1| putative transcriptional regulator [Candidatus Blochmannia
floridanus]
Length = 193
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F+++V+ I G GI++N+P +++ ++ ST D + + P+F GG
Sbjct: 24 LFKKSVVYICEHNDTGAMGIVINKPVEKYTVETILKNLKITSTQRDPSVQL-NHPVFSGG 82
Query: 190 PL--EEGLFLVSPKGG-GDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFR 246
PL + G L +P+ G G + S Q M ET+G + P++
Sbjct: 83 PLLNDRGFILHTPQTGFGSSINIS---SQTMITTSKDILETLGTPNQ--------PKNIL 131
Query: 247 FFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G GW K QL +E+ W +A + I + W ++G
Sbjct: 132 VALGYSGWTKGQLEQELIESTW-IAVPADETILFHTPIFNRWNAAAKIIG 180
>gi|319951179|ref|ZP_08025022.1| hypothetical protein ES5_16099 [Dietzia cinnamea P4]
gi|319435156|gb|EFV90433.1| hypothetical protein ES5_16099 [Dietzia cinnamea P4]
Length = 210
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 17/178 (9%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
+P G LLIA + + F R +I ++ + G G+++ R S ++E +L A
Sbjct: 26 DPVAGSLLIAAPDMPDPN-FRRAIIYMIEHDHSGSLGVVITRRSETDVEE----ILPAWS 80
Query: 179 TFSDRPLFF--GGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
P F GGP+ + G+ LV G D SG+ Q +EG + ++
Sbjct: 81 ELCAPPSVFHIGGPVKPDTGIALVVLSAGVDGHRFSGL--QQIEGRVHVVD--LDSDPDL 136
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
++ + G R F G GW QL +E+ G W VA PS + L + +W +L
Sbjct: 137 LREHIDG---MRVFVGYTGWAPGQLQDELDRGDWYVAPSLPSDL-LAPARVDVWGAVL 190
>gi|440509826|ref|YP_007347262.1| UPF0301 protein yqgE [Candidatus Blochmannia chromaiodes str. 640]
gi|440454039|gb|AGC03531.1| UPF0301 protein yqgE [Candidatus Blochmannia chromaiodes str. 640]
Length = 194
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 26/154 (16%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS---------DRPLFF 187
+F+++V+ I G GI++N+ + + T+L+ S D P+F
Sbjct: 25 LFKQSVVYICEHNDAGAMGIVINK---LVTRCTVETILNNLKIVSPTRDPSVRLDNPVFS 81
Query: 188 GGPL--EEGLFLVSP-KGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPED 244
GGPL + G L +P KG G V S + M ET+G + P+D
Sbjct: 82 GGPLLDDRGFILHTPIKGFGSSVNIS---SKAMITTSKDILETLGTPNQ--------PKD 130
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW+K QL E+ W A + +++
Sbjct: 131 ILVALGYSGWDKGQLEHELMENTWLTAPANETIL 164
>gi|359725606|ref|ZP_09264302.1| transcriptional regulator [Leptospira weilii str. 2006001855]
gi|417779287|ref|ZP_12427079.1| hypothetical protein LEP1GSC036_0279 [Leptospira weilii str.
2006001853]
gi|410780622|gb|EKR65209.1| hypothetical protein LEP1GSC036_0279 [Leptospira weilii str.
2006001853]
Length = 182
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 76/176 (43%), Gaps = 14/176 (7%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ E G +LI+ + + F +TVIL++ + G G++LN+ + I ++ + D
Sbjct: 1 MEETYNGKILISNSSI-VMDYFNQTVILMVEHDNQGAFGLVLNKKQKVFIGDVIQGIPDH 59
Query: 177 AGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
P++ GGP++ +S +++ + G+ +V+ GLY + E++K
Sbjct: 60 VS--RTLPIYSGGPVDPT--FISVLHEDNKISQPGI--EVIPGLYLA--RSYDTLLELLK 111
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+ F + G GW QL E+ W + + + L W E L
Sbjct: 112 STS----KFHVYQGYSGWSAGQLETEMDRKSWVIHEATKDFV-LNQDPETTWREAL 162
>gi|389839668|ref|YP_006341752.1| alginate biosynthesis nucleoside diphosphate kinase regulator AlgH
[Cronobacter sakazakii ES15]
gi|424800982|ref|ZP_18226524.1| UPF0301 protein YqgE [Cronobacter sakazakii 696]
gi|429101682|ref|ZP_19163656.1| UPF0301 protein YqgE [Cronobacter turicensis 564]
gi|429106104|ref|ZP_19167973.1| UPF0301 protein YqgE [Cronobacter malonaticus 681]
gi|429114992|ref|ZP_19175910.1| UPF0301 protein YqgE [Cronobacter sakazakii 701]
gi|429119935|ref|ZP_19180633.1| UPF0301 protein YqgE [Cronobacter sakazakii 680]
gi|387850144|gb|AFJ98241.1| putative alginate biosynthesis nucleoside diphosphate kinase
regulator AlgH [Cronobacter sakazakii ES15]
gi|423236703|emb|CCK08394.1| UPF0301 protein YqgE [Cronobacter sakazakii 696]
gi|426288331|emb|CCJ89769.1| UPF0301 protein YqgE [Cronobacter turicensis 564]
gi|426292827|emb|CCJ94086.1| UPF0301 protein YqgE [Cronobacter malonaticus 681]
gi|426318121|emb|CCK02023.1| UPF0301 protein YqgE [Cronobacter sakazakii 701]
gi|426325621|emb|CCK11370.1| UPF0301 protein YqgE [Cronobacter sakazakii 680]
Length = 189
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 69/172 (40%), Gaps = 27/172 (15%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F R+V+ I G G+I+N+P ++ ++ D A D+P+F GG
Sbjct: 20 LFRRSVVYICEYNNEGAMGLIINKPLENLQVEGVLQKLKITPEPRDPAIRL-DKPVFLGG 78
Query: 190 PLEE--GLFLVSPKGG---GDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPED 244
PL E G L +P + + V + L ET+G A + P+D
Sbjct: 79 PLAEDRGFILHTPPDAFSSSIRISDNTVITTSRDVL-----ETLGTAEQ--------PDD 125
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G WEK QL EEI W A +++ + W E L+G
Sbjct: 126 VLVALGYSSWEKGQLEEEILENAWLTAPADLNIL-FRTPIADRWREAAKLIG 176
>gi|220936071|ref|YP_002514970.1| hypothetical protein Tgr7_2910 [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|254801583|sp|B8GP63.1|Y2910_THISH RecName: Full=UPF0301 protein Tgr7_2910
gi|219997381|gb|ACL73983.1| protein of unknown function DUF179 [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 186
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 65/151 (43%), Gaps = 22/151 (14%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR- 183
LIA L+ + F +V I G GI++N+P+ +++K TVL+ SD
Sbjct: 11 FLIAMPGLEDPNFF-HSVTYICEHNEQGAMGIVINQPTDLTLK----TVLEHMDIESDAK 65
Query: 184 ----PLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
P+F GGP++ G L SP G V EG+ T + E + R
Sbjct: 66 AAEIPVFHGGPVQTDRGFVLHSPAGAWSSSMP------VSEGVQVTTSRDI---LEAMAR 116
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYW 268
+ GP+D G GW QL +EI W
Sbjct: 117 HE-GPKDVLVALGYAGWGAGQLEQEIADNAW 146
>gi|410448038|ref|ZP_11302125.1| hypothetical protein LEP1GSC068_4039 [Leptospira sp. Fiocruz
LV3954]
gi|422005548|ref|ZP_16352727.1| transcriptional regulator [Leptospira santarosai serovar Shermani
str. LT 821]
gi|410018119|gb|EKO80164.1| hypothetical protein LEP1GSC068_4039 [Leptospira sp. Fiocruz
LV3954]
gi|417255769|gb|EKT85227.1| transcriptional regulator [Leptospira santarosai serovar Shermani
str. LT 821]
gi|456875249|gb|EMF90473.1| hypothetical protein LEP1GSC005_0485 [Leptospira santarosai str.
ST188]
Length = 182
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 76/176 (43%), Gaps = 14/176 (7%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA 176
+ E G +LI+ + + F +TVIL++ + G G++LN+ + I ++ + D
Sbjct: 1 MEETYNGKILISNSSI-VMDYFNQTVILMVEHDNQGAFGLVLNKKQEVPIGDVIQGIPDR 59
Query: 177 AGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
P++ GGP++ +S + + + G+ +V+ GLY + E++K
Sbjct: 60 VS--RTLPIYSGGPVDPT--FISVMHEDNRISQPGI--EVIPGLYLA--RSFDTLLELLK 111
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+ F + G GW QL E+ W + + + L W+E L
Sbjct: 112 STS----KFHVYQGYSGWGAGQLETEMNRRSWVIHEATKDFV-LNQDPETTWQEAL 162
>gi|374584096|ref|ZP_09657188.1| UPF0301 protein yqgE [Leptonema illini DSM 21528]
gi|373872957|gb|EHQ04951.1| UPF0301 protein yqgE [Leptonema illini DSM 21528]
Length = 204
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 20/167 (11%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
KG LI+ + + F +TV+L++ G G+++NR S +++ ++ G +
Sbjct: 15 KGRFLISEANMADPN-FRQTVVLMIEHNEEGAFGLVVNRRSSLTLADILPDFQTDLGRRT 73
Query: 182 DRPLFFGGPLEEGLFLV--------SPKGGGDEVGKSGVFEQVMEGL--YFGTKETVGCA 231
P++ GGP+++ +P V FE + YF G A
Sbjct: 74 --PIYVGGPVQQEFLFAMHSTPHDAAPSQTALSVVDDVFFEPGFRNIDRYFKEDYVSGLA 131
Query: 232 AEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ + R F G GW QL E++ G W + S ++
Sbjct: 132 PDDMPR-------LHLFLGYSGWGPGQLEREMKDGSWIIHPASSQIV 171
>gi|71892032|ref|YP_277762.1| hypothetical protein BPEN_258 [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|119391318|sp|Q493F3.1|Y258_BLOPB RecName: Full=UPF0301 protein BPEN_258
gi|71796138|gb|AAZ40889.1| putative transcriptional regulator [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 194
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 26/154 (16%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS---------DRPLFF 187
+F+++V+ I G GI++N+ + + T+L+ S D P+F
Sbjct: 25 LFKQSVVYICEHNDAGAMGIVINK---LVTRCTVETILNNLKIVSPTRDPSVRLDNPVFA 81
Query: 188 GGPL--EEGLFLVSP-KGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPED 244
GGPL + G L +P KG G V S + M ET+G + P+D
Sbjct: 82 GGPLLDDRGFILHTPIKGFGSSVNIS---SKAMITTSKDILETLGTPNQ--------PKD 130
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW+K QL E+ W A + +++
Sbjct: 131 VLVALGYSGWDKGQLEHELMENTWLTAPANETIL 164
>gi|330815718|ref|YP_004359423.1| hypothetical protein bgla_1g07790 [Burkholderia gladioli BSR3]
gi|327368111|gb|AEA59467.1| hypothetical protein bgla_1g07790 [Burkholderia gladioli BSR3]
Length = 192
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 59/153 (38%), Gaps = 28/153 (18%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPL--EE 193
F TV+ + G G+++NRP+ + ++ + R + P++FGGP+ E
Sbjct: 26 FSGTVVYLCDHSERGALGLVINRPTDIDLESLFNRIDLKLEIEPLLHIPVYFGGPVQTER 85
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV--------GPEDF 245
G L P +EG + + TV EM V GP+ F
Sbjct: 86 GFVLHEP----------------VEGSSYSSSMTVEGGLEMTTSKDVLEAVASGSGPKRF 129
Query: 246 RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW QL +EI W A P V+
Sbjct: 130 LLTLGHAGWGAGQLEDEISKNGWLTVAADPRVV 162
>gi|326779030|ref|ZP_08238295.1| protein of unknown function DUF179 [Streptomyces griseus XylebKG-1]
gi|326659363|gb|EGE44209.1| protein of unknown function DUF179 [Streptomyces griseus XylebKG-1]
Length = 186
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 19/157 (12%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+A L + F+R V+L+L + G G+ILNRP+ + + ++ ++ A T
Sbjct: 9 GRLLVAAPALTDPN-FDRAVVLLLDHDEEGSLGVILNRPTPVGVGDILASW--AGLTGEP 65
Query: 183 RPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
+F GGP L+ L + GG +G + +G +
Sbjct: 66 DVVFQGGPVSLDSALGVAVIPGGEGPLG------------WRRVHGAIGLVDLETPPELL 113
Query: 241 GPE--DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
GP R F G GW QL E+ G W V P
Sbjct: 114 GPALGSLRIFAGYAGWGPGQLEGELNEGAWYVVESEP 150
>gi|350560406|ref|ZP_08929246.1| protein of unknown function DUF179 [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349782674|gb|EGZ36957.1| protein of unknown function DUF179 [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 235
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 67/158 (42%), Gaps = 16/158 (10%)
Query: 125 LLIATEKL-DGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM-RSTVLDAAGTFSD 182
LIA L DG F TV + G G+++N+P +S+ ++ R L+ +
Sbjct: 60 FLIAMPSLQDGY--FAHTVTYLCEHNDEGAMGLVINQPLDLSLHQLLRQVDLEPVAGAPE 117
Query: 183 RPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
+P+F GGP+ E G L S E +G + GL T + A + K
Sbjct: 118 QPVFRGGPVHPEHGFVLHS-----SEQSWTGS-RPLGSGLTLTTSHDILEAMALGK---- 167
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GP G GW QL E+ W VA SP+++
Sbjct: 168 GPAQALVALGYAGWGPGQLEGELAENAWLVAPVSPAIV 205
>gi|262377005|ref|ZP_06070231.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
gi|262308043|gb|EEY89180.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
gi|407009672|gb|EKE24759.1| hypothetical protein ACD_6C00036G0012 [uncultured bacterium]
Length = 184
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 12/143 (8%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPL--EEGL 195
F +TVI + + G GII+NRP+ + IKE+ + + A + + GGPL E G
Sbjct: 22 FAQTVIYLARHDEDGAQGIIINRPAGIQIKELLNDLDIEADNVNPHEVLQGGPLRPEAGF 81
Query: 196 FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWE 255
L + G S + V E + T + + A + VG ++ G W
Sbjct: 82 VLHT----GQPTWHSSI--AVGENVCITTSKDILDA--IAHNEGVGR--YQIALGYASWG 131
Query: 256 KEQLNEEIRAGYWTVAACSPSVI 278
K QL +EI G W + +I
Sbjct: 132 KHQLEQEIARGDWLICDSDMDLI 154
>gi|408678433|ref|YP_006878260.1| putative transcriptional regulator [Streptomyces venezuelae ATCC
10712]
gi|328882762|emb|CCA56001.1| putative transcriptional regulator [Streptomyces venezuelae ATCC
10712]
Length = 189
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 15/155 (9%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ +++ ++ + AG
Sbjct: 12 GRLLVATPALADPN-FDRAVVLLLDHDDEGSLGVVLNRPTPVTVGDILAPWAGLAG--EP 68
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
+F GGP+ L GDE G G + +V + ET +GP
Sbjct: 69 DVVFQGGPVSLDAALGVAVIPGDE-GPLG-WRRVYGAIGLVDLET--------PPELLGP 118
Query: 243 E--DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
R F G GW QL E+ G W V P
Sbjct: 119 ALGSLRIFAGYAGWGPGQLESELGDGAWYVVESEP 153
>gi|389720935|ref|ZP_10187691.1| putative transcriptional regulator [Acinetobacter sp. HA]
gi|388609216|gb|EIM38408.1| putative transcriptional regulator [Acinetobacter sp. HA]
Length = 184
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 14/157 (8%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
CL+ E D F TVI + + G GII+NRP+ + IKE+ + + A +
Sbjct: 10 CLIAPPEMRDD--FFANTVIYLARHDEDGAQGIIINRPAGIQIKELLNDLEIEADNVNPH 67
Query: 184 PLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ GGPL E G L + G S + V E + T + + A + VG
Sbjct: 68 EVLQGGPLRPEAGFVLHT----GQPTWHSSI--AVGENVCITTSKDILDA--IAHNQGVG 119
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
++ G W K QL +EI G W + +I
Sbjct: 120 R--YQIALGYASWGKGQLEKEIAKGEWLICESDMDLI 154
>gi|359787570|ref|ZP_09290607.1| transcriptional regulator [Halomonas sp. GFAJ-1]
gi|359295189|gb|EHK59474.1| transcriptional regulator [Halomonas sp. GFAJ-1]
Length = 185
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 11/144 (7%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS---DRPLFFGGPLEEG 194
F ++I + + G G+I NRP +++ + L G S + P+++GGP+ +
Sbjct: 20 FAGSLIYLCDHDNNGCMGVIANRPLEITLDALFEQ-LSLGGDDSPHRNAPVYYGGPMHKD 78
Query: 195 LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGW 254
+ G E S QV + + T + A + GPE F GC GW
Sbjct: 79 RGFILHLGDSQEWDSS---VQVEDNIALTTSMDILQAL----ADGTGPEHFLVCLGCAGW 131
Query: 255 EKEQLNEEIRAGYWTVAACSPSVI 278
+ QL EE++ W SV+
Sbjct: 132 DVGQLEEELKENAWLTVEGEGSVL 155
>gi|383311094|ref|YP_005363904.1| YqgE like protein [Pasteurella multocida subsp. multocida str.
HN06]
gi|386835084|ref|YP_006240401.1| hypothetical protein [Pasteurella multocida subsp. multocida str.
3480]
gi|425066740|ref|ZP_18469860.1| protein YqgE [Pasteurella multocida subsp. gallicida P1059]
gi|46577542|sp|Q9CJX1.1|Y1869_PASMU RecName: Full=UPF0301 protein PM1869
gi|12722297|gb|AAK03953.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
gi|380872366|gb|AFF24733.1| YqgE like protein [Pasteurella multocida subsp. multocida str.
HN06]
gi|385201787|gb|AFI46642.1| hypothetical protein NT08PM_1526 [Pasteurella multocida subsp.
multocida str. 3480]
gi|404381045|gb|EJZ77532.1| protein YqgE [Pasteurella multocida subsp. gallicida P1059]
Length = 186
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 15/159 (9%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM---RSTVLDAAGTFS 181
LIA +++ + F +V+ I G G++LN+P+ +SI E+ + ++ T+
Sbjct: 8 FLIAMPQMEDDY-FAHSVVYICEHNDQGTMGLVLNQPTDLSIAELCAKMNFMMKTDRTYG 66
Query: 182 DRPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+ + GGP +E G F++ K V +Q+ +T G A
Sbjct: 67 NDLVLAGGPVNIERG-FILHTKTAQTFKHSYKVTDQLSLTTSADIIDTFGTAQ------- 118
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE + GC W QL EI W V + ++
Sbjct: 119 -APEKYLVALGCASWTVNQLESEIANNDWLVVPANNRIL 156
>gi|389682921|ref|ZP_10174255.1| AlgH family protein [Pseudomonas chlororaphis O6]
gi|399009430|ref|ZP_10711865.1| putative transcriptional regulator [Pseudomonas sp. GM17]
gi|425902110|ref|ZP_18878701.1| AlgH family protein [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|388553128|gb|EIM16387.1| AlgH family protein [Pseudomonas chlororaphis O6]
gi|397881662|gb|EJK98151.1| AlgH family protein [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|398112200|gb|EJM02065.1| putative transcriptional regulator [Pseudomonas sp. GM17]
Length = 189
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 55/137 (40%), Gaps = 18/137 (13%)
Query: 138 FERTVILILSMEPMGPSGIILNRP---SLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEG 194
F T+ I+ G G+++NRP +L I E +D P+F GGP++
Sbjct: 25 FAHTLTYIVEHNANGAMGLVVNRPQDLNLADILEQLRPEIDPPALCQHVPIFIGGPVQTD 84
Query: 195 L-FLVSPKGGGDEVGKSGVFEQVME--GLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGC 251
F++ P G F+ +E GL T + V A + VGP G
Sbjct: 85 RGFVLHPSGP--------TFQATVELDGLSLSTSQDVLFAIA----DGVGPAKSLIALGY 132
Query: 252 CGWEKEQLNEEIRAGYW 268
GWE QL E+ W
Sbjct: 133 AGWEAGQLEAELADNAW 149
>gi|395784747|ref|ZP_10464569.1| UPF0301 protein [Bartonella melophagi K-2C]
gi|395422007|gb|EJF88229.1| UPF0301 protein [Bartonella melophagi K-2C]
Length = 200
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 75/185 (40%), Gaps = 22/185 (11%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR------PSLM----SIKEMRS 171
G LLIA ++ F R+VI + + G GIILN+ P L+ I++ +
Sbjct: 15 NGKLLIAMPRMRDKR-FVRSVIYVCAHSNSGAMGIILNQLHSIDFPELLLQLGVIEQAKK 73
Query: 172 TVLDAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCA 231
+ L + P+ +GGP++ V G V +++ + + C
Sbjct: 74 SYLSE--SIKKFPVRYGGPVDPSRGFVLHSGDYTCEATISVTDKIYLTATIDILKAISCE 131
Query: 232 AEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEEL 291
GP+ G GW+ QL EI A W +++ SPS I ES ++E
Sbjct: 132 Q--------GPQHALIALGYAGWKAGQLETEISANGWLISSASPSFI-FESDLSNTYDES 182
Query: 292 LWLMG 296
MG
Sbjct: 183 FIRMG 187
>gi|332286752|ref|YP_004418663.1| hypothetical protein PT7_3499 [Pusillimonas sp. T7-7]
gi|330430705|gb|AEC22039.1| hypothetical protein PT7_3499 [Pusillimonas sp. T7-7]
Length = 197
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 61/151 (40%), Gaps = 31/151 (20%)
Query: 141 TVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAA---GTFSDRPLFFGGPLE--EG 194
TVI + G G+++NRP+ +++ + + LD + G D P++FGGP++ G
Sbjct: 35 TVIYVCEHTDQGALGLVINRPTDLTVGGLLQRIDLDLSLEIGPVQDAPVYFGGPVQTDRG 94
Query: 195 LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV-------GPEDFRF 247
L +P GG + + +G A R+ + GPE
Sbjct: 95 FVLHAPVGG------------------YSSSIQLGDVALTTSRDVLQDVAQGKGPEQLLI 136
Query: 248 FDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW QL E+ W + + ++
Sbjct: 137 TLGYAGWGAGQLESEMSQNAWLNVSATNDIL 167
>gi|433640167|ref|YP_007285926.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070008]
gi|432156715|emb|CCK53980.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070008]
Length = 202
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 77/197 (39%), Gaps = 27/197 (13%)
Query: 105 PQNSLGDKWAHTIHEPEKGCLLIA-TEKLDGVHIFERTVILILSMEPMGPSGIILNRPSL 163
P D A G LL+A T+ L+ F R+VI I+ G G++LNRPS
Sbjct: 4 PHEDPEDHVAPAAQRVRAGTLLLANTDLLEPT--FRRSVIYIVEHNDGGTLGVVLNRPSE 61
Query: 164 MSIKEMRSTVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEG 219
++ VL + +P +F GGP+ + L L + G D G G V
Sbjct: 62 TAVY----NVLPQWAKLAVKPKTMFIGGPVKRDAALCLAVLRVGVDPEGVPG-LRHVAGR 116
Query: 220 LYF----GTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
L E + A E V R + G GW QL EI W V + P
Sbjct: 117 LVMVDLDADPEVLAAAVEGV----------RIYAGYSGWTIGQLEGEIERDDWIVLSALP 166
Query: 276 SVIGLESGTLGLWEELL 292
S + L LW ++L
Sbjct: 167 SDV-LVGPRADLWGQVL 182
>gi|357416777|ref|YP_004929797.1| hypothetical protein DSC_05525 [Pseudoxanthomonas spadix BD-a59]
gi|355334355|gb|AER55756.1| hypothetical protein DSC_05525 [Pseudoxanthomonas spadix BD-a59]
Length = 188
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 67/158 (42%), Gaps = 15/158 (9%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE-MRSTVLDAAG-TFSD 182
LLIA LD F R+V LI + G G+++NR S ++ E + LD +
Sbjct: 12 LLIALPALDDPR-FSRSVALICQHDDDGAMGVVVNRASEYTLGEVLHQMQLDTDDEALRN 70
Query: 183 RPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
R + +GGP+ E G L G E + Q+ + LY T + E + R
Sbjct: 71 RVVLYGGPVHPERGFVL---HDGAREWDST---LQISDDLYLTTSRDI---LEAMARGQ- 120
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GP++ GC GW QL E+ W A ++
Sbjct: 121 GPDNALVALGCAGWGAGQLEFELGENSWLTAPADGELL 158
>gi|300718244|ref|YP_003743047.1| hypothetical protein EbC_36690 [Erwinia billingiae Eb661]
gi|299064080|emb|CAX61200.1| Conserved uncharacterized protein [Erwinia billingiae Eb661]
Length = 187
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 26/154 (16%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F+R+V+ I G G+I+N+P ++ ++ T +A D+P+F GG
Sbjct: 18 LFKRSVVYICEHNDDGAMGVIVNKPMDNLTVDGILKKLKISPTPREAEVKL-DKPVFSGG 76
Query: 190 PLEE--GLFLVSPK---GGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPED 244
PL E G L S + V + V + L ET+G + P+D
Sbjct: 77 PLAEDRGFILHSAQRTFASSIRVSDNTVITTSRDVL-----ETLGTPEQ--------PKD 123
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G C WEK+QL E+ W + +++
Sbjct: 124 VLVALGYCAWEKDQLESELLENAWLTTPANSNIL 157
>gi|161723304|ref|NP_246808.2| hypothetical protein PM1869 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|378775071|ref|YP_005177314.1| hypothetical protein Pmu_14650 [Pasteurella multocida 36950]
gi|356597619|gb|AET16345.1| hypothetical protein Pmu_14650 [Pasteurella multocida 36950]
Length = 185
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 15/159 (9%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM---RSTVLDAAGTFS 181
LIA +++ + F +V+ I G G++LN+P+ +SI E+ + ++ T+
Sbjct: 7 FLIAMPQMEDDY-FAHSVVYICEHNDQGTMGLVLNQPTDLSIAELCAKMNFMMKTDRTYG 65
Query: 182 DRPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+ + GGP +E G F++ K V +Q+ +T G A
Sbjct: 66 NDLVLAGGPVNIERG-FILHTKTAQTFKHSYKVTDQLSLTTSADIIDTFGTAQ------- 117
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE + GC W QL EI W V + ++
Sbjct: 118 -APEKYLVALGCASWTVNQLESEIANNDWLVVPANNRIL 155
>gi|161525693|ref|YP_001580705.1| hypothetical protein Bmul_2524 [Burkholderia multivorans ATCC
17616]
gi|189349585|ref|YP_001945213.1| hypothetical protein BMULJ_00714 [Burkholderia multivorans ATCC
17616]
gi|221201077|ref|ZP_03574117.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
gi|221206471|ref|ZP_03579484.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221213803|ref|ZP_03586777.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|421473319|ref|ZP_15921443.1| hypothetical protein BURMUCF1_0559 [Burkholderia multivorans ATCC
BAA-247]
gi|421477078|ref|ZP_15924930.1| hypothetical protein BURMUCF2_0573 [Burkholderia multivorans CF2]
gi|226708036|sp|A9AFI7.1|Y714_BURM1 RecName: Full=UPF0301 protein Bmul_2524/BMULJ_00714
gi|160343122|gb|ABX16208.1| protein of unknown function DUF179 [Burkholderia multivorans ATCC
17616]
gi|189333607|dbj|BAG42677.1| putative transcriptional regulator [Burkholderia multivorans ATCC
17616]
gi|221166592|gb|EED99064.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
gi|221173780|gb|EEE06214.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
gi|221178927|gb|EEE11334.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
gi|400221282|gb|EJO51754.1| hypothetical protein BURMUCF1_0559 [Burkholderia multivorans ATCC
BAA-247]
gi|400227191|gb|EJO57202.1| hypothetical protein BURMUCF2_0573 [Burkholderia multivorans CF2]
Length = 192
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 12/145 (8%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPL--EE 193
F TV+ + G G+++NRP+ + ++ + R + P++FGGP+ E
Sbjct: 26 FSGTVVYLCDHSERGALGLVINRPTDIDLESLFNRIDLKLEIEPLLHIPVYFGGPVQTER 85
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
G L P G + V GL T + V A GP+ F G G
Sbjct: 86 GFVLHEPVEGANYSSSM----SVEGGLEMTTSKDVLEAVA----TGTGPKRFLLTLGHAG 137
Query: 254 WEKEQLNEEIRAGYWTVAACSPSVI 278
W QL EEI W A P ++
Sbjct: 138 WGAGQLEEEISRNGWLTVAADPRIV 162
>gi|21232179|ref|NP_638096.1| hypothetical protein XCC2748 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66767692|ref|YP_242454.1| hypothetical protein XC_1365 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188990809|ref|YP_001902819.1| hypothetical protein xccb100_1413 [Xanthomonas campestris pv.
campestris str. B100]
gi|384428735|ref|YP_005638095.1| hypothetical protein XCR_3113 [Xanthomonas campestris pv. raphani
756C]
gi|46577506|sp|Q8P765.1|Y2748_XANCP RecName: Full=UPF0301 protein XCC2748
gi|81306328|sp|Q4UWY9.1|Y1365_XANC8 RecName: Full=UPF0301 protein XC_1365
gi|226734150|sp|B0RQM8.1|Y1413_XANCB RecName: Full=UPF0301 protein xcc-b100_1413
gi|21113934|gb|AAM42020.1| transcriptional regulator [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66573024|gb|AAY48434.1| transcriptional regulator [Xanthomonas campestris pv. campestris
str. 8004]
gi|167732569|emb|CAP50763.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris]
gi|341937838|gb|AEL07977.1| conserved hypothetical protein [Xanthomonas campestris pv. raphani
756C]
Length = 188
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAAG 178
P LLIA L F R+V LI + G G+++NRPS ++ E+ S + +D +
Sbjct: 7 PLANQLLIALPALSD-PTFSRSVALICQHDENGAMGVLVNRPSEYTLGEVLSQMGIDTSD 65
Query: 179 T-FSDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
++P+ GGP+ E F++ D+ +V +G+Y T + A M
Sbjct: 66 ERLREQPVLSGGPVHPERGFVIH-----DDARAWDSSLEVGQGVYLTTSRDILEA--MAA 118
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ GP + GC GW QL E+ W A +V+
Sbjct: 119 GD--GPRNALVALGCAGWGAGQLEFELGENSWLTAPSDANVL 158
>gi|17545394|ref|NP_518796.1| hypothetical protein RSc0675 [Ralstonia solanacearum GMI1000]
gi|46577518|sp|Q8Y1L5.1|Y675_RALSO RecName: Full=UPF0301 protein RSc0675
gi|17427686|emb|CAD14205.1| cog1678, putative transcriptional regulator protein [Ralstonia
solanacearum GMI1000]
Length = 190
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 22/149 (14%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT------FSDRPLFFGGPL 191
F TV+ + G G+++NRP + + +T+ D +++P+++GGP+
Sbjct: 26 FSGTVVYLCEHNERGALGLVINRPIDIDL----ATLFDKIDLKLEIHPLAEQPVYYGGPV 81
Query: 192 --EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFD 249
E G L D +G V GL T + V E V R GP+ F
Sbjct: 82 QTERGFVL------HDAMGSYSSSLTVPGGLEMTTSKDV---LEAVARGG-GPQRFILTL 131
Query: 250 GCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW QL EEI W P +I
Sbjct: 132 GYAGWSAGQLEEEIGRNGWLTVQADPEII 160
>gi|66805221|ref|XP_636343.1| hypothetical protein DDB_G0289217 [Dictyostelium discoideum AX4]
gi|60464716|gb|EAL62842.1| hypothetical protein DDB_G0289217 [Dictyostelium discoideum AX4]
Length = 493
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 214 EQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAAC 273
+++ +GLY G K + + ++ + F GC W QL +EI+ G W A C
Sbjct: 402 KKIRDGLYIGGK--LKEVGDKIRNKEIDKNKLLMFVGCSTWNPGQLEKEIKEGAWFRADC 459
Query: 274 SPSVIGLESGTLGLWEELLWLMG 296
S I + W E L MG
Sbjct: 460 SNETILKQLKPKNFWAEALESMG 482
>gi|109897478|ref|YP_660733.1| hypothetical protein Patl_1153 [Pseudoalteromonas atlantica T6c]
gi|109699759|gb|ABG39679.1| protein of unknown function DUF179 [Pseudoalteromonas atlantica
T6c]
Length = 198
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
+ LLIA ++ + F R+V I G G+++N+P+ MS+KE+ + D
Sbjct: 18 QNYLLIAMPSMEDPY-FSRSVTYICEHNEQGAMGLVINQPAGMSLKELINQT-DKEAIVD 75
Query: 182 DRP----LFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
D + GGP+ + G L + + G S E + +K+ +
Sbjct: 76 DEKAENIVLAGGPVSQDRGFILHTTQPGW-----SASLALTSEIMVTTSKDILSSLG--- 127
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYW 268
N+ PE G GW QL EEIRA W
Sbjct: 128 --NSEAPEKSIVTLGYAGWSAGQLEEEIRANSW 158
>gi|398800129|ref|ZP_10559405.1| putative transcriptional regulator [Pantoea sp. GM01]
gi|398096333|gb|EJL86658.1| putative transcriptional regulator [Pantoea sp. GM01]
Length = 187
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 26/154 (16%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F+R+V+ I G G+I+N+P ++ ++ ++ D A D+P+F GG
Sbjct: 18 LFKRSVVYICEHNEDGAMGLIVNKPMENLTVEGILKKLKISASERDPAIKL-DKPVFAGG 76
Query: 190 PLEE--GLFLVSPK---GGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPED 244
PL E G L S + + + V + L E +G A++ P++
Sbjct: 77 PLAEDRGFILHSAQRIYSSSIRISDTTVITTSRDVL-----EAIGTASQ--------PDN 123
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G C WEK QL +E+ W + + +++
Sbjct: 124 VLVALGYCAWEKGQLEDELLENAWLTSPANTNIL 157
>gi|375107512|ref|ZP_09753773.1| putative transcriptional regulator [Burkholderiales bacterium
JOSHI_001]
gi|374668243|gb|EHR73028.1| putative transcriptional regulator [Burkholderiales bacterium
JOSHI_001]
Length = 193
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGPLE-E 193
F RTV+ + G G+++NRP + +K + V LD +++P+++GGP++ E
Sbjct: 24 FARTVVYLCEHNEKGALGLVINRPIDIKLKNLFEKVELPLDRD-ELAEQPVYYGGPVQTE 82
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
F++ G S GL T + V A N VGP+ G G
Sbjct: 83 RGFVLHETQGDQPSPYSSTMPIPGGGLEMTTSKDVLEALS----NGVGPKRVLVTLGYSG 138
Query: 254 WEKEQLNEEI-RAGYWTVAA 272
W QL +EI R G+ TV A
Sbjct: 139 WGAGQLEDEIGRNGWLTVDA 158
>gi|300692310|ref|YP_003753305.1| hypothetical protein RPSI07_2676 [Ralstonia solanacearum PSI07]
gi|299079370|emb|CBJ52042.1| conserved protein of unknown function, hypothetical UPF0301
protein, DUF179 domain [Ralstonia solanacearum PSI07]
gi|344168727|emb|CCA81034.1| conserved hypothetical protein, hypothetical UPF0301 protein,
DUF179 domain [blood disease bacterium R229]
Length = 190
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 60/149 (40%), Gaps = 22/149 (14%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT------FSDRPLFFGGPL 191
F TV+ + G G+++NRP + + +T+ D +++P+++GGP+
Sbjct: 26 FSGTVVYLCEHNERGALGLVINRPIDIDL----ATLFDKIDLKLEIHPLAEQPVYYGGPV 81
Query: 192 --EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFD 249
E G L D VG V GL T + V E V GP+ F
Sbjct: 82 QTERGFVL------HDAVGSYSSSLAVPGGLEMTTSKDV---LEAVAHGG-GPQRFILTL 131
Query: 250 GCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW QL EEI W P +I
Sbjct: 132 GYAGWSAGQLEEEISRNGWLTVQADPEII 160
>gi|295698293|ref|YP_003602948.1| hypothetical protein RIEPE_0064 [Candidatus Riesia pediculicola
USDA]
gi|291157351|gb|ADD79796.1| conserved hypothetical protein [Candidatus Riesia pediculicola
USDA]
Length = 187
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 19/167 (11%)
Query: 138 FERTVILILSMEPMGPSGIILNRP-SLMSIKEMRSTV-LDAA----GTFSDRPLFFGGPL 191
F+R+V+ I G G+I+N+P +SI + + +D + +P+F GGP+
Sbjct: 19 FKRSVVYICEHNDKGAMGLIINKPIEQISINNILHNLNIDPSREEIKKKISQPIFSGGPI 78
Query: 192 EE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFD 249
E G L SPK + K + +++M E++G + PE
Sbjct: 79 AEAHGFILHSPKSQFNSTLK--LSDEIMITTSKDILESLGTDRQ--------PEKTLIAL 128
Query: 250 GCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G WEK QL E+ W A + ++I + W+E L+G
Sbjct: 129 GYSSWEKGQLEREMIKNNWLTAKANSNII-FHTPVAERWKEAAALIG 174
>gi|114319511|ref|YP_741194.1| hypothetical protein Mlg_0349 [Alkalilimnicola ehrlichii MLHE-1]
gi|114225905|gb|ABI55704.1| protein of unknown function DUF179 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 191
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 60/142 (42%), Gaps = 15/142 (10%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS--DRPLFFGGPL--EE 193
F VI I P G G+++N PS + ++++ + G + D P+F GGP+ E
Sbjct: 27 FAHAVIYICEHGPEGAMGLVINHPSDLKLRDLFEHMDIEPGPDAPVDTPVFLGGPVQRER 86
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
G L P D+ S QV + T + A + GP F G G
Sbjct: 87 GFVLHPPD---DQWEASA---QVSPQVSVTTSRDIITALAQNR----GPRRFLMALGYAG 136
Query: 254 WEKEQLNEEIRAGYW-TVAACS 274
W QL EE+ + W TV A S
Sbjct: 137 WGAGQLEEEMTSNAWLTVPATS 158
>gi|344173866|emb|CCA89052.1| conserved hypothetical protein, hypothetical UPF0301 protein,
DUF179 domain [Ralstonia syzygii R24]
Length = 190
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 60/149 (40%), Gaps = 22/149 (14%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT------FSDRPLFFGGPL 191
F TV+ + G G+++NRP + + +T+ D +++P+++GGP+
Sbjct: 26 FSGTVVYLCEHNERGALGLVINRPIDIDL----ATLFDKIDLKLEIHPLAEQPVYYGGPV 81
Query: 192 --EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFD 249
E G L D VG V GL T + V E V GP+ F
Sbjct: 82 QTERGFVL------HDAVGSYSSSLAVPGGLEMTTSKDV---LEAVAHGG-GPQRFILTL 131
Query: 250 GCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW QL EEI W P +I
Sbjct: 132 GYAGWSAGQLEEEISRNGWLTVQADPEII 160
>gi|421889153|ref|ZP_16320213.1| conserved hypothetical protein, hypothetical UPF0301 protein,
DUF179 domain [Ralstonia solanacearum K60-1]
gi|378965573|emb|CCF96961.1| conserved hypothetical protein, hypothetical UPF0301 protein,
DUF179 domain [Ralstonia solanacearum K60-1]
Length = 170
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 60/149 (40%), Gaps = 22/149 (14%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT------FSDRPLFFGGPL 191
F TV+ + G G+++NRP + + +T+ D +++P+++GGP+
Sbjct: 6 FSGTVVYLCEHNERGALGLVINRPIDIDL----ATLFDKIDLKLEIHPLAEQPVYYGGPV 61
Query: 192 --EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFD 249
E G L P VG V GL T + V E V GP+ F
Sbjct: 62 QTERGFVLHDP------VGSYSSSLAVPGGLEMTTSKDV---LEAVAHGG-GPQRFILTL 111
Query: 250 GCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW QL EEI W P +I
Sbjct: 112 GYAGWSAGQLEEEIGRNGWLTVQADPEII 140
>gi|416904718|ref|ZP_11930727.1| hypothetical protein B1M_02125 [Burkholderia sp. TJI49]
gi|325529366|gb|EGD06293.1| hypothetical protein B1M_02125 [Burkholderia sp. TJI49]
Length = 192
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 59/153 (38%), Gaps = 28/153 (18%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPL--EE 193
F TV+ + G G+++NRP+ + ++ + R + P++FGGP+ E
Sbjct: 26 FSGTVVYLCDHSERGALGLVINRPTDIDLESLFNRIDLKLEIEPLLHIPVYFGGPVQTER 85
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV--------GPEDF 245
G L P +EG + + +V EM V GP+ F
Sbjct: 86 GFVLHEP----------------VEGASYNSSMSVEGGLEMTTSKDVLEAVATGSGPKRF 129
Query: 246 RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW QL EEI W A P ++
Sbjct: 130 LLTLGHAGWGAGQLEEEISRNGWLTVAADPRIV 162
>gi|167586350|ref|ZP_02378738.1| hypothetical protein BuboB_13480 [Burkholderia ubonensis Bu]
Length = 192
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 59/153 (38%), Gaps = 28/153 (18%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPL--EE 193
F TV+ + G G+++NRP+ + ++ + R + P++FGGP+ E
Sbjct: 26 FSGTVVYLCDHSERGALGLVINRPTDIDLESLFNRIDLKLEIEPLLHIPVYFGGPVQTER 85
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV--------GPEDF 245
G L P +EG + + +V EM V GP+ F
Sbjct: 86 GFVLHEP----------------VEGANYNSSMSVEGGLEMTTSKDVLEAVATGTGPKRF 129
Query: 246 RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW QL EEI W A P ++
Sbjct: 130 LLTLGHAGWGAGQLEEEISRNGWLTVAADPRIV 162
>gi|326330837|ref|ZP_08197138.1| putative transcriptional regulator [Nocardioidaceae bacterium
Broad-1]
gi|325951367|gb|EGD43406.1| putative transcriptional regulator [Nocardioidaceae bacterium
Broad-1]
Length = 188
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 68/164 (41%), Gaps = 32/164 (19%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT +L + F TV+L++ + G G++LNRPS + + E VL T
Sbjct: 10 GRLLVATPELRDPN-FVDTVVLLIEVNDDGALGVVLNRPSPVPVAE----VLHPWATSVA 64
Query: 183 RP--LFFGGPLEE------GLFLVS---PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCA 231
P LF GGP+ + L + S P G VG+ G+ + +
Sbjct: 65 VPDVLFQGGPVSKDSAIAVALLVDSDDPPLGFRPVVGRLGLLD-------------LDTP 111
Query: 232 AEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
E+V R F G GW QL E+ G W V P
Sbjct: 112 VELVDGTL---SRLRIFAGYAGWGAAQLEGEVEEGSWYVVDSEP 152
>gi|237748806|ref|ZP_04579286.1| transcriptional regulator [Oxalobacter formigenes OXCC13]
gi|229380168|gb|EEO30259.1| transcriptional regulator [Oxalobacter formigenes OXCC13]
Length = 199
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 16/147 (10%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGPLEE 193
IF TV+ + G G+++NRP +++ + + + F ++P+ FGGP+++
Sbjct: 34 IFGGTVVYLCEHNDYGALGVVINRPMELTLDHLLEKLNLKPEIPAPF-EKPVMFGGPVQD 92
Query: 194 --GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGC 251
G L +P K + + F T + A + GPE G
Sbjct: 93 DRGFVLHTPDA------KFNSMLTISNDVAFTTSRDILEAI----ASGEGPEKMLVSIGY 142
Query: 252 CGWEKEQLNEEIRAGYWTVAACSPSVI 278
GW QL +EI W + PS+I
Sbjct: 143 AGWSAGQLEQEISHNGWLTVSADPSII 169
>gi|408479514|ref|ZP_11185733.1| hypothetical protein PsR81_03094 [Pseudomonas sp. R81]
Length = 189
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 14/135 (10%)
Query: 138 FERTVILILSMEPMGPSGIILNRP---SLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEG 194
F +T+ I+ G G+++NRP +L I E +D P++ GGP++
Sbjct: 25 FAQTLTYIVEHTANGAMGLVVNRPQELNLADILEQLRPEVDTPARCQGVPIYIGGPVQTD 84
Query: 195 L-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
F++ P G + ++G+ T + V A + VGPE G G
Sbjct: 85 RGFVLHPTGPKFQATVD------LDGVSLSTSQDVLFAIA----DGVGPEQSVITLGYAG 134
Query: 254 WEKEQLNEEIRAGYW 268
WE QL E+ + W
Sbjct: 135 WEAGQLEAELASNAW 149
>gi|71731737|gb|EAO33796.1| Protein of unknown function DUF179 [Xylella fastidiosa subsp.
sandyi Ann-1]
Length = 188
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 66/163 (40%), Gaps = 15/163 (9%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAA 177
P LLIA + H F R V LI + G G++LNRPS ++ E+ + + A+
Sbjct: 7 PLVNQLLIALPSMPDPH-FARGVALICQHDSNGAMGVVLNRPSEYTLGEVLFQMGIETAS 65
Query: 178 GTFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
T ++ + GGP+ + G + D G + +GLY T V A
Sbjct: 66 ETLREQVVLAGGPVHPDRGFVIY------DSEHVWGPSLLIGDGLYLTTSRDVLAA---- 115
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GP GC GW QL E+ W + S++
Sbjct: 116 MAEGSGPSRALVALGCAGWAAGQLELELVENNWLMVPADASLL 158
>gi|410625705|ref|ZP_11336480.1| hypothetical protein GMES_0950 [Glaciecola mesophila KMM 241]
gi|410154781|dbj|GAC23249.1| hypothetical protein GMES_0950 [Glaciecola mesophila KMM 241]
Length = 185
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
+ LLIA ++ + F R+V I G G+++N+P+ MS+KE+ + D
Sbjct: 5 QNYLLIAMPSMEDPY-FSRSVTYICEHNEQGAMGLVINQPAGMSLKELINQT-DKEAIVD 62
Query: 182 DRP----LFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
D + GGP+ + G L + + G S E + +K+ +
Sbjct: 63 DEKAKNIVLAGGPVSQDRGFILHTTQPGW-----SASLALTSEIMVTTSKDILSSLG--- 114
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYW 268
N+ PE G GW QL EEIRA W
Sbjct: 115 --NSEAPEKSIVTLGYAGWSAGQLEEEIRANSW 145
>gi|430759641|ref|YP_007215498.1| UPF0301 protein YqgE [Thioalkalivibrio nitratireducens DSM 14787]
gi|430009265|gb|AGA32017.1| UPF0301 protein YqgE [Thioalkalivibrio nitratireducens DSM 14787]
Length = 192
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 16/158 (10%)
Query: 125 LLIATEKL-DGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM-RSTVLDAAGTFSD 182
LIA L DG F TV + G G+++N+P +S+ ++ R L+ +
Sbjct: 17 FLIAMPSLQDGY--FAHTVTYLCEHNDEGAMGLVINQPIDLSLHQLLRQVDLEPVAGAPE 74
Query: 183 RPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
+P+F GGP+ E G L S E +G + GL T V A + K
Sbjct: 75 QPVFRGGPVHPEHGFVLHS-----SEQSWTGS-RTLGSGLTLTTSRDVLEAMALGK---- 124
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GP G GW QL E+ W VA SP+++
Sbjct: 125 GPAQALVALGYAGWGPGQLEGELAENAWLVAPVSPAIV 162
>gi|372275230|ref|ZP_09511266.1| hypothetical protein PSL1_09041 [Pantoea sp. SL1_M5]
gi|390435319|ref|ZP_10223857.1| hypothetical protein PaggI_10822 [Pantoea agglomerans IG1]
Length = 187
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 14/147 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRP--SLMS---IKEMRSTVLDAAGTFS-DRPLFFGGPL 191
F+R+V+ + G G+I+N+P +L +K+++ + D D+P+F GGPL
Sbjct: 19 FKRSVVYLCEHNEEGAMGLIINKPMENLTVEGILKKLKISADDRDPAIKLDKPVFTGGPL 78
Query: 192 EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGC 251
E + V + + E++G A++ P + G
Sbjct: 79 AEDRGFILHSAQRTFTSSIRVSDNTIITTSRDVLESIGTASQ--------PTNVLVALGY 130
Query: 252 CGWEKEQLNEEIRAGYWTVAACSPSVI 278
C WEK+QL E+ W + +++
Sbjct: 131 CAWEKDQLENELMENAWLTTPANSNIL 157
>gi|410642142|ref|ZP_11352660.1| hypothetical protein GCHA_2904 [Glaciecola chathamensis S18K6]
gi|410648597|ref|ZP_11359001.1| hypothetical protein GAGA_4575 [Glaciecola agarilytica NO2]
gi|410131794|dbj|GAC07400.1| hypothetical protein GAGA_4575 [Glaciecola agarilytica NO2]
gi|410138459|dbj|GAC10847.1| hypothetical protein GCHA_2904 [Glaciecola chathamensis S18K6]
Length = 185
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 16/152 (10%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
+ LLIA ++ + F R+V I G G+++N+P+ MS+KE+ + A +
Sbjct: 5 QNYLLIAMPSMEDPY-FSRSVTYICEHNEQGAMGLVINQPAGMSLKELINQTNKDALVDA 63
Query: 182 DRP---LFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
D+ + GGP+ + G L + + G S E + +K+ +
Sbjct: 64 DKAQEIVLAGGPVSQDRGFILHTTQPGW-----SASLALTSEIMVTTSKDILSSLG---- 114
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYW 268
N+ PE G GW QL EEIR W
Sbjct: 115 -NSEAPEKSIVTLGYAGWSAGQLEEEIRENSW 145
>gi|238897812|ref|YP_002923491.1| hypothetical protein HDEF_0602 [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|259647095|sp|C4K450.1|Y602_HAMD5 RecName: Full=UPF0301 protein HDEF_0602
gi|229465569|gb|ACQ67343.1| conserved hypothetical protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 185
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSL-----MSIKEMRSTVLDAAGT 179
LIA L + FER+VI + G G+++N+P +K++ + + AG
Sbjct: 7 FLIAMPLLQNTY-FERSVIYVCEHNENGAMGLMINQPVARFTLERLLKKLNISSVHDAGH 65
Query: 180 FSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
++P+ GGPL + G L SP+ G + V + M +T+G +
Sbjct: 66 L-NKPVMSGGPLSDDRGFILHSPQSGFNS--SIHVSDDTMITTSKDILKTLGTKKQ---- 118
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
P++ G GW+K QL +E+ W ++
Sbjct: 119 ----PKNIMVAVGYTGWQKGQLEQELIDNVWLTTKADTEIL 155
>gi|374374674|ref|ZP_09632332.1| UPF0301 protein yqgE [Niabella soli DSM 19437]
gi|373231514|gb|EHP51309.1| UPF0301 protein yqgE [Niabella soli DSM 19437]
Length = 182
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
EP G LIA L+ + F RTV+ + G G ++NR + +I ++ + + G
Sbjct: 2 EPANGTFLIANPHLNDPN-FVRTVVFLCEHGTEGSVGFVMNRKTDQTIGDL---IPELEG 57
Query: 179 TFSDRPLFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
P++ GGP+ + + + GK ++ +G+Y+G A ++
Sbjct: 58 QLF--PIYEGGPVGMDSIHFLHQYPNELPGGK-----EITDGIYWGGNFETLMA--LMSA 108
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
+ RFF G GW + QL+ E+ W VA + S LW+++L +G
Sbjct: 109 GQIDANKVRFFLGYSGWGEAQLDMEMEEKTWIVAKARRDFV-FCSNERELWKDILKHLG 166
>gi|291618770|ref|YP_003521512.1| hypothetical protein PANA_3217 [Pantoea ananatis LMG 20103]
gi|378765825|ref|YP_005194286.1| hypothetical protein PANA5342_0856 [Pantoea ananatis LMG 5342]
gi|386017023|ref|YP_005935321.1| hypothetical protein PAJ_2445 [Pantoea ananatis AJ13355]
gi|386078092|ref|YP_005991617.1| alginate biosynthesis nucleoside diphosphate kinase regulator AlgH
[Pantoea ananatis PA13]
gi|291153800|gb|ADD78384.1| YqgE [Pantoea ananatis LMG 20103]
gi|327395103|dbj|BAK12525.1| UPF0301 protein YqgE [Pantoea ananatis AJ13355]
gi|354987273|gb|AER31397.1| alginate biosynthesis nucleoside diphosphate kinase regulator AlgH
[Pantoea ananatis PA13]
gi|365185299|emb|CCF08249.1| hypothetical protein PANA5342_0856 [Pantoea ananatis LMG 5342]
Length = 210
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 64/166 (38%), Gaps = 17/166 (10%)
Query: 138 FERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGGP 190
F+R+V+ + G G+I+N+P ++ ++ D A D+P+F GGP
Sbjct: 42 FKRSVVYVCEHNEEGAMGLIINKPMENLTVEGILKKLKIAEDNRDPAINL-DKPVFSGGP 100
Query: 191 LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDG 250
L E + V + + E +G A++ P+ G
Sbjct: 101 LAEDRGFILHSAQRTFTSSIRVSDNTVITTSRDVLEAIGTASQ--------PDHVLVALG 152
Query: 251 CCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
C WEK+QL E+ W + +++ ++ W E MG
Sbjct: 153 YCAWEKDQLENELMENAWLTTPANSNIL-FQTPIAERWREAARSMG 197
>gi|358638827|dbj|BAL26124.1| putative transcriptional regulator [Azoarcus sp. KH32C]
Length = 188
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 60/146 (41%), Gaps = 11/146 (7%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPLEEGL 195
F RT+ I G GII+NRP M++ + R + FS++P++FGGP++
Sbjct: 24 FTRTLTYIAEHNDQGALGIIVNRPIDMTLGALFERVDLTMEVDGFSEQPVYFGGPVQTDR 83
Query: 196 FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWE 255
V + G+ V ++ + +G E P + G GW
Sbjct: 84 GFVLHRPAGEWHSTLNVMDEAGLTSSRDILQAIGSRGE--------PAEVLVSLGYSGWA 135
Query: 256 KEQLNEEIRAGYW-TVAACSPSVIGL 280
QL +E+ W TV A V GL
Sbjct: 136 AGQLEQELAENAWLTVPADLSIVFGL 161
>gi|325282516|ref|YP_004255057.1| hypothetical protein Deipr_0267 [Deinococcus proteolyticus MRP]
gi|324314325|gb|ADY25440.1| protein of unknown function DUF179 [Deinococcus proteolyticus MRP]
Length = 180
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 24/149 (16%)
Query: 124 CLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
L+A+ L G F +IL+L G +G+++N+P + ++ DA+GT
Sbjct: 11 TFLVASPHLRG-SFFGDALILLLDHTEEGAAGLVINQPMDTPVSDLLPDAPDASGTA--- 66
Query: 184 PLFFGGPLEEGLFLVSPKGG----GDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
GGP V P+ G VG G ++++GL T AE +
Sbjct: 67 --LLGGP-------VQPQVGWCLYQRPVGAEGEL-RLVQGLLATTH------AETFAQVR 110
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYW 268
+ +R G GW QL +E R G W
Sbjct: 111 ASGQPYRLLLGYAGWSAGQLEQETRDGAW 139
>gi|452959148|gb|EME64489.1| hypothetical protein G352_12939 [Rhodococcus ruber BKS 20-38]
Length = 202
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 78/191 (40%), Gaps = 17/191 (8%)
Query: 106 QNSLGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMS 165
Q+ D+ A G LL++ L F RTV+ I+ +G G++LNR S +
Sbjct: 5 QDEPEDRTAPATPAVRPGTLLVSATDLVE-PTFRRTVVYIVEHGDVGSLGVVLNRTSDTA 63
Query: 166 IKEM--RSTVLDAAGTFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLY 221
++ + + T L AA + L+ GGP+ + L L + + G G GV +
Sbjct: 64 VQAVLPQWTELSAA----PKALYVGGPVRRDSALCLGTLRVGVSVDGVPGVRRIDGRVVM 119
Query: 222 FGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLE 281
A +V E R F G GW QL+ E+ W V + P I L
Sbjct: 120 IDLDSDPAVIAPLV-------EGIRIFAGYAGWSAGQLDGELDNDDWMVISALPQDI-LG 171
Query: 282 SGTLGLWEELL 292
+ LW +L
Sbjct: 172 PPRVDLWARVL 182
>gi|441162457|ref|ZP_20968100.1| hypothetical protein SRIM_29076 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440616570|gb|ELQ79705.1| hypothetical protein SRIM_29076 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 196
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + + +L+ + +
Sbjct: 9 GRLLVATPALADPN-FDRAVVLLLDHDEEGSLGVVLNRPTPVGVGD----ILEPWASLAG 63
Query: 183 RP--LFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGC----AAEMV 235
P +F GGP+ + V+ GG E +S G + +G A +
Sbjct: 64 EPGVVFQGGPVSLDSALGVAVVPGGPEAPESAPGGDGPLG-WRRVHGAIGLVDLEAPPEL 122
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
+G R F G GW QL EE+ G W V P
Sbjct: 123 LSTVLG--SLRIFAGYAGWGPGQLEEELVEGAWYVVESEP 160
>gi|238918248|ref|YP_002931762.1| hypothetical protein NT01EI_0285 [Edwardsiella ictaluri 93-146]
gi|238867816|gb|ACR67527.1| hypothetical protein NT01EI_0285 [Edwardsiella ictaluri 93-146]
Length = 177
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 26/153 (16%)
Query: 138 FERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGGP 190
F+RTVI + G G+I+N+P SL+ ++ + DA D+P+ GGP
Sbjct: 9 FKRTVIYVCEHNEDGAMGMIINKPLEQLTLSSLLEKLDITPSPRDATIRL-DKPVLAGGP 67
Query: 191 LEE--GLFLVSPK---GGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDF 245
L E G L SP G ++G + + L ET+G + P++
Sbjct: 68 LAEDRGFVLHSPTDTFGSSADIGPGCMLTTSRDVL-----ETLGTDRQ--------PQEI 114
Query: 246 RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G C W K QL +E+ W ++
Sbjct: 115 LVTLGYCSWSKGQLEQELLDNTWLTVEADSQIL 147
>gi|255311011|ref|ZP_05353581.1| hypothetical protein Ctra62_01090 [Chlamydia trachomatis 6276]
gi|255317312|ref|ZP_05358558.1| hypothetical protein Ctra6_01085 [Chlamydia trachomatis 6276s]
gi|385240642|ref|YP_005808483.1| hypothetical protein G11222_01080 [Chlamydia trachomatis G/11222]
gi|296436650|gb|ADH18820.1| hypothetical protein G11222_01080 [Chlamydia trachomatis G/11222]
Length = 189
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 24/184 (13%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRS-TVLDAAGT 179
+KG LL+A+ ++G IF R+V+L+ P G G+ILN+ I E+ S + +
Sbjct: 10 DKGSLLVASPDVNG-GIFSRSVVLVCEHSPNGSFGLILNK-----ILEIDSPEEIFSLDH 63
Query: 180 FSDRPLFF--GGPLEEG---LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
F + + F GGPL+ L SP + ++ ++ G + E
Sbjct: 64 FDESKVRFCMGGPLQANQIMLLHTSPDSANSSI-------EICPSVFLGGDFSFAGEKEG 116
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWL 294
R+ + G GW+ QL +E G W +A S +I +W ++L
Sbjct: 117 RTRD----DKMLLCFGYSGWQGGQLEKEFLEGLWFLAPSSQEII-FTDAPERMWSDVLQH 171
Query: 295 MGRR 298
+G R
Sbjct: 172 LGGR 175
>gi|296141883|ref|YP_003649126.1| hypothetical protein [Tsukamurella paurometabola DSM 20162]
gi|296030017|gb|ADG80787.1| protein of unknown function DUF179 [Tsukamurella paurometabola DSM
20162]
Length = 209
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 16/176 (9%)
Query: 97 PDAAVNYPPQNSLGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGI 156
PD + P+++ + A + E G LL+++ +L F RTV+ ++ G G+
Sbjct: 3 PDRSNESAPRDASSGENAGSGFEVSAGTLLVSSPELY-EPTFRRTVVYLIEHNESGSLGV 61
Query: 157 ILNRPSLMSIKEMRSTVLDAAGTFSDRP--LFFGGPLEE--GLFLVSPKGGGDEVGKSGV 212
+LNRPS ++ VL + +P +F GGP+ + L L K G D G G+
Sbjct: 62 VLNRPSESAVH----GVLPQWHELAAKPKAVFVGGPVNQSAALCLGVVKAGQDVNGIRGL 117
Query: 213 FEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYW 268
+ V E++ + R F G GW QL++E+ W
Sbjct: 118 QPVAGRVVLVDLDSDVEMMDELL-------DGVRVFAGYSGWGMGQLDDELERDDW 166
>gi|149911575|ref|ZP_01900188.1| hypothetical protein PE36_05288 [Moritella sp. PE36]
gi|149805354|gb|EDM65366.1| hypothetical protein PE36_05288 [Moritella sp. PE36]
Length = 193
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 57/153 (37%), Gaps = 19/153 (12%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDA-----------AGTFSDRPL 185
IFER VI I G GII+N P +SI E+ S + A D P+
Sbjct: 19 IFERAVIYICEHNADGAMGIIINLPVNISIDELLSKTVIADLDDETAAPVEPKITIDEPV 78
Query: 186 FFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDF 245
F GGP+ E V + + +M T+G + P+++
Sbjct: 79 FKGGPVSEDRGFVLHTAYPGFSSSLQINDDLMITSSLDVLATLGTDKQ--------PDNY 130
Query: 246 RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW K QL +EI W +++
Sbjct: 131 IVALGYSGWTKGQLEQEIADNSWLTINADENIL 163
>gi|254253088|ref|ZP_04946406.1| hypothetical protein BDAG_02338 [Burkholderia dolosa AUO158]
gi|124895697|gb|EAY69577.1| hypothetical protein BDAG_02338 [Burkholderia dolosa AUO158]
Length = 210
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 12/145 (8%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPL--EE 193
F TV+ + G G+++NRP+ + ++ + R + P++FGGP+ E
Sbjct: 44 FSGTVVYLCDHSERGALGLVINRPTDIDLESLFNRIDLKLEIEPLLHIPVYFGGPVQTER 103
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
G L P G + V GL T + V A GP+ F G G
Sbjct: 104 GFVLHEPVEGANYNSSM----SVEGGLAMTTSKDVLEAVA----TGTGPKRFLLTLGHAG 155
Query: 254 WEKEQLNEEIRAGYWTVAACSPSVI 278
W QL EEI W A P ++
Sbjct: 156 WGAGQLEEEISRNGWLTVAADPRIV 180
>gi|257453529|ref|ZP_05618819.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
gi|257448987|gb|EEV23940.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
Length = 188
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMS--IKEMRSTVLDAAGTFSD 182
LIA+ +DG IF ++++ I + G G+++N+P S K +D T
Sbjct: 11 FLIASPNIDG-GIFYQSLVYICRQDQQGTLGLVVNKPIETSNVAKLFEELNIDVTITDLH 69
Query: 183 RPL-FFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
R L GGP+ + V G D V + E V +K+ + A N G
Sbjct: 70 RKLPLDGGPMNPEVGFVLHTGQPDWVSSFAITENV---CITTSKDILQSIA-----NGQG 121
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGL 280
E F G W K QL EEI G W V P+ +GL
Sbjct: 122 VEHFELCLGHASWGKGQLEEEINQGDWFVL---PASMGL 157
>gi|28199162|ref|NP_779476.1| hypothetical protein PD1276 [Xylella fastidiosa Temecula1]
gi|182681893|ref|YP_001830053.1| hypothetical protein XfasM23_1361 [Xylella fastidiosa M23]
gi|46577451|sp|Q87C20.1|Y1276_XYLFT RecName: Full=UPF0301 protein PD_1276
gi|226734117|sp|B2I5Z0.1|Y1361_XYLF2 RecName: Full=UPF0301 protein XfasM23_1361
gi|28057260|gb|AAO29125.1| transcriptional regulator [Xylella fastidiosa Temecula1]
gi|182632003|gb|ACB92779.1| protein of unknown function DUF179 [Xylella fastidiosa M23]
Length = 188
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 15/158 (9%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSD 182
LLIA + H F R V LI + G G++LNRPS ++ E+ + + A+ T +
Sbjct: 12 LLIALPSMPDPH-FARGVALICQHDSNGAMGVVLNRPSEYTLGEVLFQMGIETASETLRE 70
Query: 183 RPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
+ + GGP+ + G + D G + +GLY T V A
Sbjct: 71 QVVLAGGPVHPDRGFVIY------DSEHVWGPSLLIGDGLYLTTSRDVLAA----MAEGS 120
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GP GC GW QL E+ W + S++
Sbjct: 121 GPSRALVALGCAGWAAGQLELELVENNWLMVPADASLL 158
>gi|387873454|ref|YP_006303758.1| hypothetical protein W7S_00220 [Mycobacterium sp. MOTT36Y]
gi|443308361|ref|ZP_21038147.1| hypothetical protein W7U_21995 [Mycobacterium sp. H4Y]
gi|386786912|gb|AFJ33031.1| hypothetical protein W7S_00220 [Mycobacterium sp. MOTT36Y]
gi|442763477|gb|ELR81476.1| hypothetical protein W7U_21995 [Mycobacterium sp. H4Y]
Length = 201
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 73/180 (40%), Gaps = 22/180 (12%)
Query: 104 PPQNSLGDKWAHTIHEPEKGCLLIA-TEKLDGVHIFERTVILILSMEPMGPSGIILNRPS 162
PP D A G LL+A T+ L+ F R+VI I+ G G++LNR S
Sbjct: 2 PPPEDPEDYVAPAAQRVRAGTLLLANTDLLEPT--FRRSVIYIVEHNDGGTLGVVLNRAS 59
Query: 163 LMSIKEMRSTVLDAAGTFSDRP--LFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVME 218
++ VL + +P +F GGP+ + L L + + G D G+
Sbjct: 60 ETAVY----NVLPQWTNLAAKPKTMFIGGPVKRDAALCLATLRVGADPHDVPGLRH---- 111
Query: 219 GLYFGTKETVGCAAEMVKRNAVGP--EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPS 276
G V A+ +A+ P E R F G GW QL EI W V + PS
Sbjct: 112 --VDGRVVMVDLDAD---PDAIAPLVEGVRIFAGYSGWTIGQLEGEIERDDWIVLSALPS 166
>gi|238026384|ref|YP_002910615.1| hypothetical protein [Burkholderia glumae BGR1]
gi|237875578|gb|ACR27911.1| Hypothetical protein bglu_1g07190 [Burkholderia glumae BGR1]
Length = 192
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 59/153 (38%), Gaps = 28/153 (18%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPL--EE 193
F TV+ + G G+++NRP+ + ++ + R + P++FGGP+ E
Sbjct: 26 FAGTVVYLCDHSERGALGLVINRPTDIDLESLFNRIDLKLEIEPLLHIPVYFGGPVQTER 85
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV--------GPEDF 245
G L P +EG + + TV EM V GP+ F
Sbjct: 86 GFVLHEP----------------VEGSTYSSSMTVEGGLEMTTSKDVLEAVASGSGPKRF 129
Query: 246 RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW QL +EI W A P ++
Sbjct: 130 LLTLGHAGWGAGQLEDEISKNGWLTVAADPRIV 162
>gi|71274449|ref|ZP_00650737.1| Protein of unknown function DUF179 [Xylella fastidiosa Dixon]
gi|71164181|gb|EAO13895.1| Protein of unknown function DUF179 [Xylella fastidiosa Dixon]
gi|71729810|gb|EAO31909.1| Protein of unknown function DUF179 [Xylella fastidiosa Ann-1]
Length = 188
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 15/158 (9%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSD 182
LLIA + H F R V LI + G G++LNRPS ++ E+ + + A+ T +
Sbjct: 12 LLIALPSMPDPH-FARGVALICQHDSNGSMGVVLNRPSEYTLGEVLFQMGIETASETLRE 70
Query: 183 RPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
+ + GGP+ + G + D G + +GLY T V A
Sbjct: 71 QVVLAGGPVHPDRGFVIY------DSEHVWGPSLLIGDGLYLTTSRDVLAA----MAEGS 120
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GP GC GW QL E+ W + S++
Sbjct: 121 GPSRALVALGCAGWAAGQLELELVENNWLMVPADASLL 158
>gi|440286223|ref|YP_007338988.1| putative transcriptional regulator [Enterobacteriaceae bacterium
strain FGI 57]
gi|440045745|gb|AGB76803.1| putative transcriptional regulator [Enterobacteriaceae bacterium
strain FGI 57]
Length = 187
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 65/168 (38%), Gaps = 19/168 (11%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP----SLMSIKEMRSTVLDA--AGTFSDRPLFFGGP 190
IF R+V+ I G GII+N+P + I E D D+P+ GGP
Sbjct: 18 IFRRSVVYICEYNDDGAMGIIINKPLENLQVEGILEKLKITPDPRDPSIRLDKPVMLGGP 77
Query: 191 LEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFF 248
L E G L +P + + + + ET+G A + P D
Sbjct: 78 LAEDRGFILHTPPASFSSSIR--ISDNTIVTTSRDVLETLGTATQ--------PTDVLVA 127
Query: 249 DGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G WEK QL +EI W A +++ ++ W + L+G
Sbjct: 128 LGYASWEKGQLEQEILDNAWLTAPADLNIL-FKTPIADRWRDAAKLIG 174
>gi|308188041|ref|YP_003932172.1| hypothetical protein Pvag_2562 [Pantoea vagans C9-1]
gi|308058551|gb|ADO10723.1| UPF0301 protein [Pantoea vagans C9-1]
Length = 187
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 14/147 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRP--SLMS---IKEMRSTVLDAAGTFS-DRPLFFGGPL 191
F+R+V+ + G G+I+N+P +L +K+++ + D D+P+F GGPL
Sbjct: 19 FKRSVVYLCEHNEEGAMGLIINKPMENLTVEGILKKLKISADDRDPAIRLDKPVFTGGPL 78
Query: 192 EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGC 251
E + V + + E++G A++ P + G
Sbjct: 79 AEDRGFILHSAQRTFTSSIRVSDNTIITTSRDVLESIGTASQ--------PTNVLVALGY 130
Query: 252 CGWEKEQLNEEIRAGYWTVAACSPSVI 278
C WEK+QL E+ W + +++
Sbjct: 131 CAWEKDQLENELMENAWLTTPANSNIL 157
>gi|126463419|ref|YP_001044533.1| hypothetical protein Rsph17029_2659 [Rhodobacter sphaeroides ATCC
17029]
gi|332559472|ref|ZP_08413794.1| hypothetical protein RSWS8N_10455 [Rhodobacter sphaeroides WS8N]
gi|429207138|ref|ZP_19198397.1| UPF0301 protein YqgE [Rhodobacter sp. AKP1]
gi|166228420|sp|A3PN45.1|Y2659_RHOS1 RecName: Full=UPF0301 protein Rsph17029_2659
gi|126105083|gb|ABN77761.1| protein of unknown function DUF179 [Rhodobacter sphaeroides ATCC
17029]
gi|332277184|gb|EGJ22499.1| hypothetical protein RSWS8N_10455 [Rhodobacter sphaeroides WS8N]
gi|428189513|gb|EKX58066.1| UPF0301 protein YqgE [Rhodobacter sp. AKP1]
Length = 184
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 71/179 (39%), Gaps = 15/179 (8%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRP--SLMSIKEMRSTVLDAAGT 179
G LLIA + FER+++LI + P G G+++N+P L + + A
Sbjct: 4 SGSLLIAMPSMADPR-FERSLVLICAHSPDGAMGLVINKPVEDLSFAGMLEQLNIPRAPN 62
Query: 180 FSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
D + GGP+E G L SP V ++ FG TV + +
Sbjct: 63 GRDIRVHLGGPMERGRGFVLHSPD-------YMSVGATMLVSGKFGMTATVDILEALARG 115
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GP G GW QL E++ W + A +PS + G W +L MG
Sbjct: 116 Q--GPSSALMALGYSGWGPGQLEAEVQRNDW-LTAEAPSELVFSDDDPGKWTGMLRHMG 171
>gi|374703230|ref|ZP_09710100.1| hypothetical protein PseS9_07526 [Pseudomonas sp. S9]
Length = 189
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 27/167 (16%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPS---LMSIKEMRSTVLDAAG 178
K LLIA + H F +TV I+ G G+++NRP+ L + E S +
Sbjct: 10 KHQLLIAMPHMADEH-FAQTVTYIVDHNEQGAMGLVINRPNGLNLADVLEQLSEDSEPPA 68
Query: 179 TFSDRPLFFGGPLEEGL-FLVSPKGGGD----EVGKSGVF--EQVMEGLYFGTKETVGCA 231
P+F GGP++ F++ P G E+G+ G+ + V+ + GT
Sbjct: 69 ICESLPIFSGGPVQTDRGFVLHPAGDSYQATLELGELGLTTSQDVLFAIAAGT------- 121
Query: 232 AEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GP+ + G GW+ QL EI W + +++
Sbjct: 122 ---------GPDKYLITLGYAGWDAGQLEAEIADNAWLTCPATQNIL 159
>gi|74318597|ref|YP_316337.1| hypothetical protein Tbd_2579 [Thiobacillus denitrificans ATCC
25259]
gi|119391317|sp|Q3SFS4.1|Y2579_THIDA RecName: Full=UPF0301 protein Tbd_2579
gi|74058092|gb|AAZ98532.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
25259]
Length = 185
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 55/152 (36%), Gaps = 29/152 (19%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAAGTFSDRPLFFGGPL--EEG 194
F T+ I G G+++NRP + + + + L ++FGGP+ E G
Sbjct: 22 FNGTLTYICDHSDQGALGVVVNRPIDLDLSTLFEQIGLSLPEGLHGEIVYFGGPVQTERG 81
Query: 195 LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV--------GPEDFR 246
L +P L F + TV A + V GPE F
Sbjct: 82 FVLHTPP------------------LTFSSTLTVNDAVSLTTSKDVLEAVSQGAGPEKFI 123
Query: 247 FFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW QL +E++ W A P VI
Sbjct: 124 VSLGYAGWSAGQLEDELKQNAWLSVAADPQVI 155
>gi|386083200|ref|YP_005999482.1| hypothetical protein XFLM_00440 [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|417557893|ref|ZP_12208899.1| transcriptional regulator [Xylella fastidiosa EB92.1]
gi|307578147|gb|ADN62116.1| hypothetical protein XFLM_00440 [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|338179523|gb|EGO82463.1| transcriptional regulator [Xylella fastidiosa EB92.1]
Length = 183
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 15/158 (9%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSD 182
LLIA + H F R V LI + G G++LNRPS ++ E+ + + A+ T +
Sbjct: 7 LLIALPSMPDPH-FARGVALICQHDSNGAMGVVLNRPSEYTLGEVLFQMGIETASETLRE 65
Query: 183 RPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
+ + GGP+ + G + D G + +GLY T V A
Sbjct: 66 QVVLAGGPVHPDRGFVIY------DSEHVWGPSLLIGDGLYLTTSRDVLAA----MAEGS 115
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GP GC GW QL E+ W + S++
Sbjct: 116 GPSRALVALGCAGWAAGQLELELVENNWLMVPADASLL 153
>gi|302534741|ref|ZP_07287083.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302443636|gb|EFL15452.1| conserved hypothetical protein [Streptomyces sp. C]
Length = 188
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 15/155 (9%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + ++++ AG
Sbjct: 11 GRLLVATPALADPN-FDRAVVLLLDHDEQGSLGVVLNRPTPVDVRDILLPWAPLAGDPGV 69
Query: 183 RPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
+F GGP L+ L + G E G G + +V + E A + A+
Sbjct: 70 --VFQGGPVALDSALGVAVIPG---EEGPLG-WRRVHGAIGLVDLE----APPELLATAL 119
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
G R F G GW QL +E+ G W V P
Sbjct: 120 G--ALRIFAGYSGWGPGQLEDELGGGAWYVVDSEP 152
>gi|71909504|ref|YP_287091.1| hypothetical protein Daro_3893 [Dechloromonas aromatica RCB]
gi|119391985|sp|Q478W0.1|Y3893_DECAR RecName: Full=UPF0301 protein Daro_3893
gi|71849125|gb|AAZ48621.1| Protein of unknown function DUF179 [Dechloromonas aromatica RCB]
Length = 186
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 63/163 (38%), Gaps = 25/163 (15%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRP---SLMSIKEMRSTVLDAAGTFS 181
LIA L+ + F ++ I G GII+NRP +L S+ E L+A +
Sbjct: 10 FLIAMPTLEDPY-FSNALVYICEHNENGALGIIVNRPIDMNLASLLEKIDIKLEAE-NLA 67
Query: 182 DRPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
D P++FGGP L+ G L P G VG + ++
Sbjct: 68 DMPVYFGGPVQLDRGFVLHRPIGQWQST--------------LAINSDVGLTSSRDVLSS 113
Query: 240 VG----PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
VG P + G GW+ QL EE+ W S++
Sbjct: 114 VGSAGLPAEILVTLGYAGWDAGQLEEELAQNSWLTVPAKASIL 156
>gi|126640402|ref|YP_001083386.1| hypothetical protein A1S_0320 [Acinetobacter baumannii ATCC 17978]
gi|332854387|ref|ZP_08435339.1| Uncharacterized ACR [Acinetobacter baumannii 6013150]
gi|332867602|ref|ZP_08437750.1| Uncharacterized ACR [Acinetobacter baumannii 6013113]
gi|332873064|ref|ZP_08441021.1| Uncharacterized ACR [Acinetobacter baumannii 6014059]
gi|332728063|gb|EGJ59454.1| Uncharacterized ACR [Acinetobacter baumannii 6013150]
gi|332733876|gb|EGJ65022.1| Uncharacterized ACR [Acinetobacter baumannii 6013113]
gi|332738576|gb|EGJ69446.1| Uncharacterized ACR [Acinetobacter baumannii 6014059]
Length = 168
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 12/143 (8%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPL--EEGL 195
F TVI + + G GII+NRP+ + IKE+ + + A + + GGPL E G
Sbjct: 6 FANTVIYLARHDEEGAQGIIINRPAGIQIKELLNDLDIDADNVNPHEVLQGGPLRPEAGF 65
Query: 196 FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWE 255
L + G S + V E + T + + A + VG ++ G W
Sbjct: 66 VLHT----GQPTWHSSI--AVGENVCITTSKDILDA--IAHNEGVGR--YQIALGYASWG 115
Query: 256 KEQLNEEIRAGYWTVAACSPSVI 278
K QL +EI G W + +I
Sbjct: 116 KNQLEDEIARGDWLICDADMDLI 138
>gi|359408151|ref|ZP_09200623.1| putative transcriptional regulator [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356676908|gb|EHI49257.1| putative transcriptional regulator [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 196
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 80/191 (41%), Gaps = 22/191 (11%)
Query: 106 QNSLGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSL-M 164
QN D + + E G LL+AT ++ F R VI I + G+I+N+P+ +
Sbjct: 3 QNKSSDH--NMLSESLAGHLLVATPQMTDPR-FRRAVIFICQHDKEAAMGLIINQPNTDL 59
Query: 165 SIKEMRSTV-LDAAGTFSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLY 221
S +++ + L+ +D P++ GGP+E G L + + + E +
Sbjct: 60 SFQKLAEHLNLEQPSLDTDEPVYKGGPVEPQRGYILHTDD------------QMLPETIP 107
Query: 222 FGTKETVGCAAEMVKR--NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIG 279
+ +M+ +GP + G GW QL +E+R W + ++
Sbjct: 108 IANGICLSLHVDMITEITRGLGPSFAKVMLGYAGWSAGQLEDEMRENMWVHLPATTDIL- 166
Query: 280 LESGTLGLWEE 290
+ T LW++
Sbjct: 167 FRTDTEALWDK 177
>gi|83746229|ref|ZP_00943283.1| Transcriptional regulator, algH [Ralstonia solanacearum UW551]
gi|207744139|ref|YP_002260531.1| cog1678, transcriptional regulator protein [Ralstonia solanacearum
IPO1609]
gi|300704911|ref|YP_003746514.1| hypothetical protein RCFBP_20740 [Ralstonia solanacearum CFBP2957]
gi|386334353|ref|YP_006030524.1| transcriptional regulator [Ralstonia solanacearum Po82]
gi|421900165|ref|ZP_16330528.1| cog1678, putative transcriptional regulator protein [Ralstonia
solanacearum MolK2]
gi|83727195|gb|EAP74319.1| Transcriptional regulator, algH [Ralstonia solanacearum UW551]
gi|206591371|emb|CAQ56983.1| cog1678, putative transcriptional regulator protein [Ralstonia
solanacearum MolK2]
gi|206595543|emb|CAQ62470.1| cog1678, putative transcriptional regulator protein [Ralstonia
solanacearum IPO1609]
gi|299072575|emb|CBJ43925.1| conserved protein of unknown function, hypothetical UPF0301
protein, DUF179 domain [Ralstonia solanacearum CFBP2957]
gi|334196803|gb|AEG69988.1| putative transcriptional regulator protein [Ralstonia solanacearum
Po82]
Length = 190
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 60/149 (40%), Gaps = 22/149 (14%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT------FSDRPLFFGGPL 191
F TV+ + G G+++NRP + + +T+ D +++P+++GGP+
Sbjct: 26 FSGTVVYLCEHNERGALGLVINRPIDIDL----ATLFDKIDLKLEIHPLAEQPVYYGGPV 81
Query: 192 --EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFD 249
E G L P VG V GL T + V E V GP+ F
Sbjct: 82 QTERGFVLHDP------VGSYSSSLAVPGGLEMTTSKDV---LEAVAHGG-GPQRFILTL 131
Query: 250 GCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW QL EEI W P +I
Sbjct: 132 GYAGWSAGQLEEEIGRNGWLTVQADPEII 160
>gi|15838819|ref|NP_299507.1| hypothetical protein XF2228 [Xylella fastidiosa 9a5c]
gi|46577565|sp|Q9PBB6.1|Y2228_XYLFA RecName: Full=UPF0301 protein XF_2228
gi|9107377|gb|AAF85027.1|AE004035_6 transcriptional regulator [Xylella fastidiosa 9a5c]
Length = 188
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 15/158 (9%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSD 182
LLIA + H F R V LI + G G++LNRPS ++ E+ + + A+ T +
Sbjct: 12 LLIALPSMPDPH-FARGVALICQHDSNGSMGVVLNRPSEYTLGEVLFQMGIETASETLRE 70
Query: 183 RPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
+ + GGP+ + G + D G + +GLY T V A
Sbjct: 71 QVVLAGGPVHPDRGFVIY------DSEHVWGPSLLIGDGLYLTTSRDVLTA----MAEGS 120
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GP GC GW QL E+ W + S++
Sbjct: 121 GPSRALVALGCAGWAAGQLELELVENNWLMVPADASLL 158
>gi|114570773|ref|YP_757453.1| hypothetical protein Mmar10_2223 [Maricaulis maris MCS10]
gi|114341235|gb|ABI66515.1| protein of unknown function DUF179 [Maricaulis maris MCS10]
Length = 195
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 16/189 (8%)
Query: 114 AHTIHEPEK---GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSL-MSIKEM 169
A T H E G LLIAT + G F+R VIL+ G GII+N+P+ + + E+
Sbjct: 4 ASTTHVDETFLGGKLLIATPAI-GDPRFDRAVILVCDHTAEGAMGIIINKPAAGLRLPEL 62
Query: 170 RSTV-LDAAGTFSDRPLFFGGPLEEGL-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKET 227
+ +D++ D P+ GGP+++ F++ + ++ + +++ GL TK+
Sbjct: 63 FEQLEVDSSQPAPDGPVLVGGPVDKDRGFVLHTRDYANDEATLPINDRI--GLT-ATKDV 119
Query: 228 VGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGL 287
+ A + P+ G GW QL++E+ A W V ++ E+
Sbjct: 120 LEAMA-----SDSPPQRSLLALGYSGWAAGQLDDELVANAWLVCDMDEQLV-FETDDADK 173
Query: 288 WEELLWLMG 296
W L +G
Sbjct: 174 WPRALECLG 182
>gi|149191950|ref|ZP_01870181.1| hypothetical protein VSAK1_07834 [Vibrio shilonii AK1]
gi|148834217|gb|EDL51223.1| hypothetical protein VSAK1_07834 [Vibrio shilonii AK1]
Length = 194
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 24/153 (15%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-----LDAAGTFS---DRPLFFGG 189
F+R+VI + G GI++N P +++ M V + + T S D P+ GG
Sbjct: 24 FQRSVIYVCEHNEEGAMGIMINTPIDVTVANMLKQVQVELPIASQTTHSKSLDEPVLNGG 83
Query: 190 PLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM--VKRNAVGPEDF 245
P+ E G L PK ++ + K +V + ++ V P+++
Sbjct: 84 PVSEDRGFILHKPK------------DKYQSSIQITDKVSVTTSKDILAVLGTDAQPDNY 131
Query: 246 RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW QL E+ W PS+I
Sbjct: 132 LVALGYSGWSAGQLESELAENSWLTIEADPSII 164
>gi|365862623|ref|ZP_09402363.1| putative transcriptional regulator [Streptomyces sp. W007]
gi|364007878|gb|EHM28878.1| putative transcriptional regulator [Streptomyces sp. W007]
Length = 186
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 64/155 (41%), Gaps = 15/155 (9%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+A L IF+R V+L+L + G G++LNRP+ + + ++ ++ A T
Sbjct: 9 GRLLVAAPALTD-PIFDRAVVLLLDHDEEGSLGVVLNRPTPVGVGDILASW--AGLTGEP 65
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
+F GGP+ L GDE G G + +G +GP
Sbjct: 66 DVVFQGGPVSLDSALGVAVIPGDE-GPLG---------WRRVHGAIGLVDLETPPELLGP 115
Query: 243 E--DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
R F G GW QL E+ G W V P
Sbjct: 116 ALGSLRIFAGYAGWGPGQLEGELNEGAWYVVESEP 150
>gi|381402779|ref|ZP_09927463.1| hypothetical protein S7A_00950 [Pantoea sp. Sc1]
gi|380735978|gb|EIB97041.1| hypothetical protein S7A_00950 [Pantoea sp. Sc1]
Length = 187
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 14/147 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRP--SLMS---IKEMRSTVLDAAGTFS-DRPLFFGGPL 191
F+R+V+ + G G+I+N+P +L +K+++ + D D+P+F GGPL
Sbjct: 19 FKRSVVYLCEHNEEGAMGLIINKPMENLTVEGILKKLKISADDRDPAIRLDKPVFTGGPL 78
Query: 192 EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGC 251
E + V + + E++G A++ P + G
Sbjct: 79 AEDRGFILHSAQRTFTSSIRVSDNTVITTSRDVLESIGTASQ--------PTNVLVALGY 130
Query: 252 CGWEKEQLNEEIRAGYWTVAACSPSVI 278
C WEK+QL E+ W + +++
Sbjct: 131 CAWEKDQLENELMENAWLTTPANSNIL 157
>gi|77464579|ref|YP_354083.1| hypothetical protein RSP_0999 [Rhodobacter sphaeroides 2.4.1]
gi|119391321|sp|Q3IZ52.1|Y2614_RHOS4 RecName: Full=UPF0301 protein RHOS4_26140
gi|77388997|gb|ABA80182.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
Length = 184
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 71/179 (39%), Gaps = 15/179 (8%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRP--SLMSIKEMRSTVLDAAGT 179
G LLIA + FER+++LI + P G G+++N+P L + + A
Sbjct: 4 SGSLLIAMPSMADPR-FERSLVLICAHSPDGAMGLVVNKPVEDLSFAGMLEQLNIPRAPN 62
Query: 180 FSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
D + GGP+E G L SP V ++ FG TV + +
Sbjct: 63 GRDIRVHLGGPMERGRGFVLHSPD-------YMSVGATMLVSGKFGMTATVDILEALARG 115
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GP G GW QL E++ W + A +PS + G W +L MG
Sbjct: 116 Q--GPSSALMALGYSGWGPGQLEAEVQRNDW-LTAEAPSELVFSDDDPGKWTGMLRHMG 171
>gi|407792547|ref|ZP_11139584.1| transcriptional regulator [Idiomarina xiamenensis 10-D-4]
gi|407217660|gb|EKE87492.1| transcriptional regulator [Idiomarina xiamenensis 10-D-4]
Length = 185
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 16/162 (9%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRST---VLDAAG 178
+ +IAT +D F+RTV I G G+++N+P+ +++ + V
Sbjct: 5 QNHFIIATPDMDDP-AFKRTVTYICEHNEEGAMGLVINQPADVAVNHLLQQLEIVYPEQS 63
Query: 179 TFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
P++ GGP+ + G L P+ + + + +M E +G +A
Sbjct: 64 QLLQAPVYSGGPVARDRGFVLHPPQDNWRSSLR--MSDDIMVTTSRDILEALGSSA---- 117
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
P F G GWE QL +EI W A +++
Sbjct: 118 ----APHQFILTLGYAGWEAGQLEQEIADNAWLTIAADANIL 155
>gi|297184205|gb|ADI20323.1| putative transcriptional regulator [uncultured alpha
proteobacterium EB080_L27A02]
Length = 188
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 14/152 (9%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSL-MSIKEM-RSTVLDAAGTF 180
G LLIA + G F+++VI + S G GII+N+PS+ + + ++ + + G
Sbjct: 9 GKLLIAMPGI-GDQNFDKSVIYMCSHSEDGAMGIIVNKPSIDLKLSDLFKQLSIATVGLI 67
Query: 181 SDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK--RN 238
S + GGP+E G + D V K L + ++ + E+++
Sbjct: 68 SSETVHIGGPVEHGRGFILHS--SDYVAKD-------SSLNVTDRISMTASLEILEDISK 118
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270
GP ++ G GW QL EI+A W +
Sbjct: 119 GKGPSNYLLSLGYSGWGPGQLEAEIQANGWLI 150
>gi|167841113|ref|ZP_02467797.1| hypothetical protein Bpse38_30849 [Burkholderia thailandensis
MSMB43]
gi|424903122|ref|ZP_18326635.1| hypothetical protein A33K_14493 [Burkholderia thailandensis MSMB43]
gi|390930995|gb|EIP88396.1| hypothetical protein A33K_14493 [Burkholderia thailandensis MSMB43]
Length = 192
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 58/153 (37%), Gaps = 28/153 (18%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPL--EE 193
F TV+ + G G+++NRP+ + ++ + R + P++FGGP+ E
Sbjct: 26 FSGTVVYLCDHSERGALGLVINRPTDIDLESLFNRIDLKLEIEPLLHIPVYFGGPVQTER 85
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV--------GPEDF 245
G L P +EG + + V EM V GP+ F
Sbjct: 86 GFVLHEP----------------VEGSSYNSSMAVEGGLEMTTSKDVLEAVATGTGPKRF 129
Query: 246 RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW QL EEI W A P ++
Sbjct: 130 LLTLGHAGWGAGQLEEEISKNGWLTVAADPRIV 162
>gi|164685860|ref|ZP_01947455.2| conserved hypothetical protein [Coxiella burnetii 'MSU Goat Q177']
gi|164601377|gb|EAX31926.2| conserved hypothetical protein [Coxiella burnetii 'MSU Goat Q177']
Length = 181
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 28/179 (15%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRS--TVLDAAGTFSD 182
L+A +L+ F + VI + + G GII+NRP +++ ++ + A ++
Sbjct: 11 FLVAMPQLNDF-TFTKAVIYVSQHDAKGALGIIINRPLALTLGKVLEHLNIEIAQPQIAN 69
Query: 183 RPLFFGGPL-EEGLFLV----SPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
P+ GGP+ +E F+V SP+G E L +K+ + + + +
Sbjct: 70 HPVLMGGPIGQEHGFIVYEQESPQGA--------------EILLSASKDML----DDIAK 111
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
N GP+DF G G E QL EI W V + ++ E+ W++ L+G
Sbjct: 112 NK-GPDDFLITLGYAGGEAGQLENEIARNDWLVVPFNRKIL-FETPLKSRWQKAAALIG 168
>gi|445499213|ref|ZP_21466068.1| hypothetical protein DUF179/UPF0301 [Janthinobacterium sp. HH01]
gi|444789208|gb|ELX10756.1| hypothetical protein DUF179/UPF0301 [Janthinobacterium sp. HH01]
Length = 216
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 14/146 (9%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPLEE- 193
IF TV+ + G G+++N+P+ M+++ + R + AG D P+ FGGP+++
Sbjct: 51 IFGGTVVYVCEHNENGVLGVVINKPTDMTMEVLFERIDLKLEAGVDVDAPIMFGGPVQDD 110
Query: 194 -GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
G L +P G S V + + F T V E V GP+ G
Sbjct: 111 RGFVLHTP---GQRYSSS---LTVTKDVAFTTSIDV---LEAVAAGD-GPQRMLVSIGYS 160
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVI 278
GW QL +EI W P ++
Sbjct: 161 GWSPGQLEDEISRNGWLTVGADPDIL 186
>gi|88705484|ref|ZP_01103195.1| protein containing DUF179 [Congregibacter litoralis KT71]
gi|88700574|gb|EAQ97682.1| protein containing DUF179 [Congregibacter litoralis KT71]
Length = 173
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 16/147 (10%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAAGTFSDRPLFFGGPLE-EG 194
+F ++ I G GI++N+P +S+ E+ + +D A F D+ + GGP++ +
Sbjct: 8 LFSGSITYICEHGEAGAMGIVINQPLDLSLGEIFDHLEIDCAPRFQDQVVLAGGPVQIDH 67
Query: 195 LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKET-VGCAAEMVKRNAVG--PEDFRFFDGC 251
F++ P+G EQ + T E + + +++ A G P+D+ G
Sbjct: 68 GFVLHPRG-----------EQTWDSSLRVTPEVQLTTSRDVLSAIAAGEGPKDYAVALGY 116
Query: 252 CGWEKEQLNEEIRAGYWTVAACSPSVI 278
GW QL EEI W +I
Sbjct: 117 AGWSAGQLEEEIANNSWLTLPADKRII 143
>gi|212219591|ref|YP_002306378.1| transcriptional regulator [Coxiella burnetii CbuK_Q154]
gi|212013853|gb|ACJ21233.1| transcriptional regulator [Coxiella burnetii CbuK_Q154]
Length = 194
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 28/179 (15%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRS--TVLDAAGTFSD 182
L+A +L+ F + VI + + G GII+NRP +++ ++ + A ++
Sbjct: 24 FLVAMPQLNDF-TFTKAVIYVSQHDAKGALGIIINRPLALTLGKVLEHLNIEIAQPQIAN 82
Query: 183 RPLFFGGPL-EEGLFLV----SPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
P+ GGP+ +E F+V SP+G E L +K+ + + + +
Sbjct: 83 HPVLMGGPIGQEHGFIVYEQESPQGA--------------EILLSASKDML----DDIAK 124
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
N GP+DF G G E QL EI W V + ++ E+ W++ L+G
Sbjct: 125 NK-GPDDFLITLGYAGGEAGQLENEIARNDWLVVPFNRKIL-FETPLKSRWQKAAALIG 181
>gi|56476386|ref|YP_157975.1| transcriptional regulator [Aromatoleum aromaticum EbN1]
gi|81358144|sp|Q5P6I7.1|Y949_AZOSE RecName: Full=UPF0301 protein AZOSEA09490
gi|56312429|emb|CAI07074.1| putative transcriptional regulator [Aromatoleum aromaticum EbN1]
Length = 188
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 64/155 (41%), Gaps = 29/155 (18%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPLE--E 193
F R++ I G GII+NRP M++ + R V A + +P++FGGP++
Sbjct: 24 FVRSLTYIAEHNEQGALGIIVNRPIDMTLAALFERIDVPLEADGLAGQPVYFGGPVQTDR 83
Query: 194 GLFLVSPKGG-------GDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFR 246
G L P G DEVG + + + + VG + E P +
Sbjct: 84 GFVLHRPAGEWHSTLVVNDEVGLTSSRDIL---------QAVGSSGE--------PPEVL 126
Query: 247 FFDGCCGWEKEQLNEEIRAGYW-TVAACSPSVIGL 280
G GW QL +EI W TV A V GL
Sbjct: 127 VTLGYAGWTAGQLEQEIADNSWLTVPADLAIVFGL 161
>gi|411005012|ref|ZP_11381341.1| hypothetical protein SgloC_19546 [Streptomyces globisporus C-1027]
Length = 186
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 15/155 (9%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+A L + F+R V+L+L + G G++LNRP+ + + ++ ++ AA T
Sbjct: 9 GRLLVAAPALTDPN-FDRAVVLLLDHDEEGSLGVVLNRPTPVGVGDILASW--AALTGEP 65
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
+F GGP+ L GDE G G + +G +GP
Sbjct: 66 DVVFQGGPVSLDSALGVAVIPGDE-GPLG---------WRRVHGAIGLVDLETPPELLGP 115
Query: 243 E--DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
R F G GW QL E+ G W V P
Sbjct: 116 ALGSLRIFAGYAGWGPGQLEGELSEGAWYVVESEP 150
>gi|196228626|ref|ZP_03127492.1| protein of unknown function DUF179 [Chthoniobacter flavus Ellin428]
gi|196226907|gb|EDY21411.1| protein of unknown function DUF179 [Chthoniobacter flavus Ellin428]
Length = 186
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 71/180 (39%), Gaps = 26/180 (14%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPM-GPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
G LLIA L + F R+V+ I S + G G+I+NRP+ ++ E+ G S
Sbjct: 13 GSLLIAHPGLLDPN-FRRSVLFISSNDAQEGSFGLIINRPASRTVAELLPN--KDLGMLS 69
Query: 182 DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
P+F GGP+ + + +E E + + AAE+V
Sbjct: 70 RVPVFLGGPVATDQLVFAAFQWHEET----------ERMVCRPHLVIDEAAEIVHDETT- 118
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLE---------SGTLGLWEELL 292
R F G GW K QL E+ W V + + LE + T G W LL
Sbjct: 119 --IVRAFVGYAGWSKGQLEGELAQRTWLVRPAARDTLDLERCPTLWREITSTFGPWFRLL 176
>gi|399991525|ref|YP_006571765.1| hypothetical protein PGA1_c03130 [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
gi|398656080|gb|AFO90046.1| hypothetical protein PGA1_c03130 [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
Length = 185
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPS----LMSIKEMRSTVLDAAG 178
G LLIA + G FE ++IL+ S E G G+I+N+P+ L ++ E +A
Sbjct: 5 GELLIAMPGI-GDPRFEHSLILLCSHEDDGAMGLIVNKPAAGVDLSNLLEQLDITPRSAE 63
Query: 179 TFSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
+ P+ FGGP+E G L SP+ ++ + L ++ ++++
Sbjct: 64 EAA-LPVRFGGPVETQRGFVLHSPE-----------YKSNVSSLRVAEAFSMTATVDVLE 111
Query: 237 RNAVG--PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWL 294
A+G PE G GW QL EI W A +P ++ + + WE L
Sbjct: 112 DIAMGRGPEQVMVMLGYAGWGPGQLETEIANNGWLNAPATPELV-FDLDDITKWEAALRS 170
Query: 295 MG 296
+G
Sbjct: 171 LG 172
>gi|224002557|ref|XP_002290950.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972726|gb|EED91057.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 645
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 37/218 (16%)
Query: 103 YPPQNSLGDKWAHTIHEP-EKGCLLIATEKLD---GV--HIFERTVILILSM-EPMGPSG 155
+ P +S +WA+ + EKG +++ + D G+ F + VIL+L E G
Sbjct: 122 FTPLDS--SQWAYDSGKVIEKGAVILGGVEQDFGFGLRQQYFHKAVILVLEHDENTFTKG 179
Query: 156 IILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEGLFLVSPK-----GGGDEVGKS 210
IILNRPS + M V D ++FGG ++ GL + P E K
Sbjct: 180 IILNRPS---DQMMDDDVNDGV----KWRVWFGGDVQ-GLDSLLPDIVCLHSLKSEAAKD 231
Query: 211 GVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270
V++G+ + + A ++VKR EDF F G GW QL+ E+ W +
Sbjct: 232 ASV-TVVKGIQW---TSFSNAKQLVKRGVASVEDFWLFAGYAGWGPRQLSGELDRKSWYM 287
Query: 271 AACSPSVI---------GLESGTLGL--WEELLWLMGR 297
A + G++ GL WE L+ ++GR
Sbjct: 288 CATDSQTLLKELARQSYGIDPRDAGLETWELLMNMIGR 325
>gi|400753168|ref|YP_006561536.1| hypothetical protein PGA2_c02710 [Phaeobacter gallaeciensis 2.10]
gi|398652321|gb|AFO86291.1| hypothetical protein PGA2_c02710 [Phaeobacter gallaeciensis 2.10]
Length = 185
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 72/163 (44%), Gaps = 19/163 (11%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPS----LMSIKEMRSTVLDAAG 178
G LLIA + G FE ++IL+ S E G G+I+N+P+ L ++ E +A
Sbjct: 5 GELLIAMPGI-GDPRFEHSLILLCSHEDDGAMGLIVNKPAAGVDLSNLLEQLDITPRSAE 63
Query: 179 TFSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFE-QVMEGLYFGTKETVGCAAEMV 235
+ P+ FGGP+E G L SP+ KS V +V E F TV ++
Sbjct: 64 EAA-LPVRFGGPVETQRGFVLHSPEY------KSNVSSLRVAEA--FSMTATVDVLEDIA 114
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GPE G GW QL EI W A +P ++
Sbjct: 115 MGR--GPEQVMVMLGYAGWGPGQLETEIANNGWLNAPATPELV 155
>gi|339482060|ref|YP_004693846.1| hypothetical protein Nit79A3_0568 [Nitrosomonas sp. Is79A3]
gi|338804205|gb|AEJ00447.1| UPF0301 protein yqgE [Nitrosomonas sp. Is79A3]
Length = 187
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 22/150 (14%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSI----KEMRSTVLDAAGTFSDRPLFFGGP-- 190
+F +T+ + G GI++NRP+ +++ K++ + +D+ P+ FGGP
Sbjct: 21 LFSKTLTYVCEHNEQGALGIVINRPTDLTLCNLFKQLGISQMDSLA--ESTPVLFGGPVQ 78
Query: 191 LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR--NAVGPEDFRFF 248
L+ G L P G L + + + +++K NA GPE
Sbjct: 79 LDCGFVLHHPVGKWQST------------LVVNQEVGLTTSLDILKAIANAEGPEQVLIA 126
Query: 249 DGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW Q+ E+ W S VI
Sbjct: 127 MGYAGWAAGQIEHELAQNAWLTVPASADVI 156
>gi|255348569|ref|ZP_05380576.1| hypothetical protein Ctra70_01115 [Chlamydia trachomatis 70]
gi|255503109|ref|ZP_05381499.1| hypothetical protein Ctra7_01125 [Chlamydia trachomatis 70s]
Length = 189
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 24/184 (13%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRS-TVLDAAGT 179
+KG LL+A+ ++G IF R+V+L+ P G G+ILN+ I E+ S +
Sbjct: 10 DKGSLLVASPDVNG-GIFSRSVVLVCEHSPNGSFGLILNK-----ILEIDSPEEIFPLDH 63
Query: 180 FSDRPLFF--GGPLEEG---LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
F + + F GGPL+ L SP + ++ ++ G + E
Sbjct: 64 FDESKVRFCMGGPLQANQIMLLHTSPDSANSSI-------EICPSVFLGGDFSFAGEKEG 116
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWL 294
R+ + G GW+ QL +E G W +A S +I +W ++L
Sbjct: 117 RTRD----DKMLLCFGYSGWQGGQLEKEFLEGLWFLAPSSQEII-FTDAPERMWSDVLQH 171
Query: 295 MGRR 298
+G R
Sbjct: 172 LGGR 175
>gi|239817578|ref|YP_002946488.1| hypothetical protein Vapar_4617 [Variovorax paradoxus S110]
gi|259647055|sp|C5CL71.1|Y4617_VARPS RecName: Full=UPF0301 protein Vapar_4617
gi|239804155|gb|ACS21222.1| protein of unknown function DUF179 [Variovorax paradoxus S110]
Length = 199
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 60/148 (40%), Gaps = 11/148 (7%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPL--EE 193
F R+V+ + G G+++N+PS +++K + + + + D P+F GGP+ E
Sbjct: 26 FNRSVVYLCEHSERGALGLVINKPSDINLKVLFEKIELHLSRPELGDAPVFQGGPVQTER 85
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVME---GLYFGTKETVGCAAEMVKRNAVGPEDFRFFDG 250
G L P E + V+ M GL T + V A GP G
Sbjct: 86 GFVLHEPVFTHAEKPEESVYASTMTIPGGLEMTTSKDVLEAL----ATGAGPRKVLVSLG 141
Query: 251 CCGWEKEQLNEEIRAGYWTVAACSPSVI 278
W + QL E+ W P+VI
Sbjct: 142 YSAWGEGQLESELAENSWLTVGADPAVI 169
>gi|118573930|sp|Q21YP2.2|Y1377_RHOFD RecName: Full=UPF0301 protein Rfer_1377
Length = 199
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 63/161 (39%), Gaps = 12/161 (7%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSD 182
LIA L IF R+V+ + G G+++N+P + +K + + + S+
Sbjct: 14 FLIAMPGLQD-EIFSRSVVYVCEHSQRGALGLVINKPCDIDMKRLFEKVELPMCRADLSN 72
Query: 183 RPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVM---EGLYFGTKETVGCAAEMVKR 237
P+F GGP+ E G L + V+ M GL T + V A +
Sbjct: 73 TPVFLGGPVQTERGFVLHEATFADADKPAESVYASTMVIPGGLEMTTSKDVLEAISI--- 129
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GP G W + QL EI W A + SVI
Sbjct: 130 -GAGPRKVLVSLGYAAWGEGQLESEISENSWLTVAANNSVI 169
>gi|239988092|ref|ZP_04708756.1| hypothetical protein SrosN1_12362 [Streptomyces roseosporus NRRL
11379]
gi|291445072|ref|ZP_06584462.1| UPF0301 protein [Streptomyces roseosporus NRRL 15998]
gi|291348019|gb|EFE74923.1| UPF0301 protein [Streptomyces roseosporus NRRL 15998]
Length = 186
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 15/155 (9%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+A L + F+R V+L+L + G G++LNRP+ + + ++ ++ AA T
Sbjct: 9 GRLLVAAPALTDPN-FDRAVVLLLDHDEEGSLGVVLNRPTPVGVGDILASW--AALTGEP 65
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
+F GGP+ L GDE G G + +G +GP
Sbjct: 66 DVVFQGGPVSLDSALGVAVIPGDE-GPLG---------WRRVHGAIGLVDLETPPELLGP 115
Query: 243 E--DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
R F G GW QL E+ G W V P
Sbjct: 116 ALGSLRIFAGYAGWGPGQLEGELAEGAWYVVESEP 150
>gi|260429618|ref|ZP_05783595.1| conserved hypothetical protein [Citreicella sp. SE45]
gi|260420241|gb|EEX13494.1| conserved hypothetical protein [Citreicella sp. SE45]
Length = 191
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 78/181 (43%), Gaps = 21/181 (11%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPS----LMSIKEMRSTVLDAAG 178
G +LIA + G FE V+ + + G G+I+N+PS + ++ E S + A
Sbjct: 12 GKMLIAMPGM-GDPRFEHAVVYMCAHSDEGAMGLIVNKPSGDVTMAALLEQLS--ISPAP 68
Query: 179 TFSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFE-QVMEGLYFGTKETVGCAAEMV 235
R + FGGP+E G L SP KSG+ QV E F T+ +
Sbjct: 69 GLDLRHVHFGGPVEAGRGFVLHSPDY------KSGLTTLQVDED--FNMTGTLDVLETIA 120
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLM 295
+ N PE + G GW QL E+ W V SP+++ ++ WE L M
Sbjct: 121 RGNP--PERWMAMLGYAGWGPGQLEGELAQNAWLVCDASPALV-FDTADASKWEAALNSM 177
Query: 296 G 296
G
Sbjct: 178 G 178
>gi|256426020|ref|YP_003126673.1| hypothetical protein Cpin_7071 [Chitinophaga pinensis DSM 2588]
gi|256040928|gb|ACU64472.1| protein of unknown function DUF179 [Chitinophaga pinensis DSM 2588]
Length = 184
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 16/176 (9%)
Query: 123 GCLLIATEKLDGVHIFERTVILILS-MEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
G LLIA L + F RTV+L+ E G G +LN+ S+ E+ VL +
Sbjct: 7 GILLIADPFLKDQN-FARTVVLLCEHQESRGSFGFVLNKVFDQSLNELVPEVL-----IN 60
Query: 182 DRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
+ +++GGP++ + + + + E+ + G ++ +G+Y+G + ++ +
Sbjct: 61 NIRVYYGGPVQIDTIHFIHQQ---PELIRGGF--EIRDGVYWGGE--FDQVVSLINSGRL 113
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
+FF G GW QL E+ W ++ + +I E+ +W + L +G
Sbjct: 114 DLNKIKFFIGYSGWSSGQLENELNEKSWILSESNAPLI-FEAKEQNIWPQALKNLG 168
>gi|384418483|ref|YP_005627843.1| hypothetical protein XOC_1495 [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|353461397|gb|AEQ95676.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 185
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 75/184 (40%), Gaps = 22/184 (11%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT 179
P LLIA L F R+V LI + G G+++NRPS ++ E VL G
Sbjct: 4 PLANQLLIALPALSD-PTFSRSVALICQHDENGAMGVLVNRPSEYTLGE----VLSQMGI 58
Query: 180 FSDRPLFFGGPLEEGLFL----VSPKGG---GDEVGKSGVFEQVMEGLYFGTKETVGCAA 232
+D PL E + L V P+ G D+ + +V +G++ T + A
Sbjct: 59 DTDDE-----PLREQIVLSGGPVHPERGFVIHDDAREWDSSLEVGQGVFLTTSRDILEA- 112
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
M N GP + GC GW QL E+ W A +V+ + W+
Sbjct: 113 -MAAGN--GPRNALVALGCAGWGAGQLEFELGENSWLTAPSDANVL-FATALADRWQTAA 168
Query: 293 WLMG 296
W +G
Sbjct: 169 WRIG 172
>gi|331684575|ref|ZP_08385167.1| protein YqgE [Escherichia coli H299]
gi|450192373|ref|ZP_21891608.1| hypothetical protein A364_14942 [Escherichia coli SEPT362]
gi|331078190|gb|EGI49396.1| protein YqgE [Escherichia coli H299]
gi|449318689|gb|EMD08753.1| hypothetical protein A364_14942 [Escherichia coli SEPT362]
Length = 187
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 68/172 (39%), Gaps = 27/172 (15%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F R+V+ I P G G+I+N+P ++ ++ D A D+P+ GG
Sbjct: 18 LFRRSVVYICEHNPDGAMGLIINKPLENLQVEGILEKLKITPEPRDPAIRL-DKPVMLGG 76
Query: 190 PLEE--GLFLVSPK---GGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPED 244
PL E G L +P + + V + L ET+G + P D
Sbjct: 77 PLAEDRGFILHTPPSRFASSIRISDNTVVTTSRDVL-----ETIGTPKQ--------PAD 123
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G WEK QL +EI W A +++ ++ W E L+G
Sbjct: 124 VLVALGYSSWEKGQLEQEILDNAWLTAPADLNIL-FKTPIADRWREAAKLIG 174
>gi|237746672|ref|ZP_04577152.1| transcriptional regulator [Oxalobacter formigenes HOxBLS]
gi|229378023|gb|EEO28114.1| transcriptional regulator [Oxalobacter formigenes HOxBLS]
Length = 186
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 14/146 (9%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS--DRPLFFGGPLEE- 193
IF +V+ + G G+++N+P ++I + + + +P+ FGGP++E
Sbjct: 21 IFGGSVVYLCEHNERGALGVVINKPMDITIGHLLERLNLNLEIPAPVHKPVMFGGPVQED 80
Query: 194 -GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
G L SP+ + K + + + F T + A + GP+ G
Sbjct: 81 RGFVLHSPETEFTSMLK------ISDQVAFTTSRDILEAIA----SGTGPQRLLVSIGYA 130
Query: 253 GWEKEQLNEEIRAGYWTVAACSPSVI 278
GW QL +EI W A PS+I
Sbjct: 131 GWSAGQLEDEISHNGWLTVAADPSII 156
>gi|227549418|ref|ZP_03979467.1| protein of hypothetical function DUF179 [Corynebacterium
lipophiloflavum DSM 44291]
gi|227078495|gb|EEI16458.1| protein of hypothetical function DUF179 [Corynebacterium
lipophiloflavum DSM 44291]
Length = 202
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 70/175 (40%), Gaps = 11/175 (6%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
EP G LL+A + F RTV+LI+ G+ILN S +++ +D
Sbjct: 18 EPAPGMLLLAAPGMLSPE-FARTVVLIVDHGVNSTLGVILNSRSEIAVDNAMPAWVDLVA 76
Query: 179 TFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
+ ++ GGP+ + G V +SGV L R+
Sbjct: 77 --EPQAMYLGGPVGATSVV------GIGVTRSGVLIDDHPVLTRLANRLAQVDLRADPRD 128
Query: 239 AVGPED-FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
D R F G W QL+EEI G W +A PS + + ++ LW +++
Sbjct: 129 VAQVVDSLRLFLGYAEWAPGQLDEEIERGDWFIAPALPSDV-VAPASVDLWGDVM 182
>gi|254464071|ref|ZP_05077482.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
gi|206684979|gb|EDZ45461.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
Length = 185
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPS-LMSIKEMRSTVLDAAGTFS 181
G LLIA + G FE V+ + S G G+I+N+P+ +++ ++ LD G S
Sbjct: 5 GKLLIAMPGI-GDPRFEHAVVFLCSHGEEGAMGLIVNKPADGVALGDLLEQ-LDMGGEGS 62
Query: 182 DR---PLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
P+ FGGP+E G L +P +E + L ++ ++++
Sbjct: 63 AAAALPVRFGGPVETQRGFVLHTPD-----------YESDVSSLKVPGGFSMTATLDILE 111
Query: 237 --RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
N GP+D G GW QL EI W A SP ++
Sbjct: 112 DIANGHGPKDLLVLLGYAGWGPGQLESEIAMNGWLTAEASPELV 155
>gi|456062581|ref|YP_007501551.1| hypothetical protein D521_0246 [beta proteobacterium CB]
gi|455439878|gb|AGG32816.1| hypothetical protein D521_0246 [beta proteobacterium CB]
Length = 221
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 56/135 (41%), Gaps = 12/135 (8%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGP--LEE 193
F +VI + G G+++NRP+ + + + + V A S +P++FGGP +E
Sbjct: 51 FAGSVIYLFEHTERGAMGLVINRPTELDMGALFEKIEVKLEAEPVSVQPVYFGGPVQIER 110
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
G L P EV S V GL T + V A GP F G G
Sbjct: 111 GFVLHEPT---TEVAYSSSLA-VPGGLTMTTSKDVLEAV----AAGFGPSKFLMTLGYAG 162
Query: 254 WEKEQLNEEIRAGYW 268
W QL EEI W
Sbjct: 163 WSAGQLEEEITLNGW 177
>gi|89900171|ref|YP_522642.1| hypothetical protein Rfer_1377 [Rhodoferax ferrireducens T118]
gi|89344908|gb|ABD69111.1| protein of unknown function DUF179 [Rhodoferax ferrireducens T118]
Length = 182
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 59/150 (39%), Gaps = 11/150 (7%)
Query: 136 HIFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPL-- 191
IF R+V+ + G G+++N+P + +K + + + S+ P+F GGP+
Sbjct: 7 EIFSRSVVYVCEHSQRGALGLVINKPCDIDMKRLFEKVELPMCRADLSNTPVFLGGPVQT 66
Query: 192 EEGLFLVSPKGGGDEVGKSGVFEQVM---EGLYFGTKETVGCAAEMVKRNAVGPEDFRFF 248
E G L + V+ M GL T + V A + GP
Sbjct: 67 ERGFVLHEATFADADKPAESVYASTMVIPGGLEMTTSKDVLEAISI----GAGPRKVLVS 122
Query: 249 DGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G W + QL EI W A + SVI
Sbjct: 123 LGYAAWGEGQLESEISENSWLTVAANNSVI 152
>gi|406573612|ref|ZP_11049360.1| hypothetical protein B277_02306 [Janibacter hoylei PVAS-1]
gi|404556982|gb|EKA62436.1| hypothetical protein B277_02306 [Janibacter hoylei PVAS-1]
Length = 185
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 73/176 (41%), Gaps = 23/176 (13%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L +F R+V+L+L + G+ILN+P + + VL S
Sbjct: 7 GKLLVATPDLTD-DLFARSVVLVLQHDEDTAEGVILNKPLDTPVDD----VLPGWQQGSS 61
Query: 183 RP--LFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
RP +F GGP L+ + LV G +E GV FG V + +
Sbjct: 62 RPQRVFQGGPVQLDSAIGLVGLPGDAEE--PPGVRR------LFGAISLVDLDS---PQE 110
Query: 239 AVGPE--DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+ P+ R F G GW QL +E G W V + I + LW +L
Sbjct: 111 IIWPQVSALRIFAGYSGWSASQLADERARGGWYVVDVEVADI-FDEDPATLWRRVL 165
>gi|336310600|ref|ZP_08565572.1| UPF0301 protein YqgE [Shewanella sp. HN-41]
gi|335866330|gb|EGM71321.1| UPF0301 protein YqgE [Shewanella sp. HN-41]
Length = 187
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 65/160 (40%), Gaps = 24/160 (15%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAA 177
E + LIA LDG + FERTVI + + G G+++N+P + + + + L A
Sbjct: 2 ESLQNYFLIAMPSLDGTY-FERTVIYLCEHDAKGAMGLVINKPLGIKVNSLLEQMDLPAE 60
Query: 178 GTFSD----RPLFFGGPLEE--GLFLVSPK---GGGDEVGKSGVFEQVMEGLYFGTKETV 228
T D + GGP+ + G L S + ++G GL T V
Sbjct: 61 QTSVDLAQSSQVLMGGPVSQDRGFVLHSSQPYWANSTDLGS---------GLMLTTSRDV 111
Query: 229 GCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYW 268
A + P+ F G GW K QL +E+ W
Sbjct: 112 LTAIGSDR----SPKKFLVTLGYAGWSKNQLEQELADNSW 147
>gi|120556669|ref|YP_961020.1| hypothetical protein Maqu_3764 [Marinobacter aquaeolei VT8]
gi|120326518|gb|ABM20833.1| protein of unknown function DUF179 [Marinobacter aquaeolei VT8]
Length = 188
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 13/143 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPL--EEGL 195
F VI + G G+++N+P + + E+ LD G D P++ GGP+ E G
Sbjct: 27 FHGGVIYLCEHSEEGALGLMINQPLDIHLGEILEQ-LDMHGGELDLPVYTGGPVQPERGF 85
Query: 196 FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWE 255
L SP G + V ++V+ E++G GPE F G GW
Sbjct: 86 VLHSP--GRQWQNTARVTDEVLLTTSRDILESIG--------RDEGPESFLVALGYSGWG 135
Query: 256 KEQLNEEIRAGYWTVAACSPSVI 278
+ QL EE+ + W S ++
Sbjct: 136 EGQLEEELGSNAWLTCPASTDIL 158
>gi|83643444|ref|YP_431879.1| putative transcriptional regulator [Hahella chejuensis KCTC 2396]
gi|119369523|sp|Q2SPH0.1|Y550_HAHCH RecName: Full=UPF0301 protein HCH_00550
gi|83631487|gb|ABC27454.1| putative transcriptional regulator [Hahella chejuensis KCTC 2396]
Length = 185
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 13/143 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGP--LEEGL 195
FE T+ I G GI++NRP + + +M + L+ G P++ GGP +E G
Sbjct: 24 FEGTISYICDHNDEGAMGIVINRPLDIRLSDMLAQ-LELGGEGIAMPVYSGGPVQIERGF 82
Query: 196 FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWE 255
L SP G +S + ++ + T + + E + R VGP+ G GW
Sbjct: 83 VLHSPLGDW----QSSI--EIAPDICITTSKDI---LEAMAR-GVGPDRTLVALGYAGWG 132
Query: 256 KEQLNEEIRAGYWTVAACSPSVI 278
QL +EI +W ++I
Sbjct: 133 AGQLEKEISNNFWITCPADSAII 155
>gi|242237996|ref|YP_002986177.1| hypothetical protein Dd703_0544 [Dickeya dadantii Ech703]
gi|242130053|gb|ACS84355.1| protein of unknown function DUF179 [Dickeya dadantii Ech703]
Length = 197
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 20/151 (13%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F+RTVI I G G+++N+P +++ ++ T D A D+P+F GG
Sbjct: 28 VFKRTVIYICEHNEDGAMGLVINKPMEQFTVETILKKLKIEPTPRDPAIRL-DKPVFMGG 86
Query: 190 PL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRF 247
PL + G L +P G + ++ M ET+G + P++
Sbjct: 87 PLADDRGFILHTPCEGF--ASSISISDETMITTSKDVLETLGTPDQ--------PQNTLV 136
Query: 248 FDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G WE QL E+ W A ++
Sbjct: 137 TLGYSAWESGQLENELLENAWLTAPADSQIL 167
>gi|344206355|ref|YP_004791496.1| hypothetical protein [Stenotrophomonas maltophilia JV3]
gi|343777717|gb|AEM50270.1| UPF0301 protein yqgE [Stenotrophomonas maltophilia JV3]
Length = 188
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 14/135 (10%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPL--EE 193
F R+V LI + G G+++N+PS ++ E+ + + G R + GGP+ E
Sbjct: 24 FARSVALICQHDENGAMGVLVNQPSEYTLGEVLAQMDITTGDGDLQARMVLNGGPVHPER 83
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
G + D G EGLY T + E + R GP + GC G
Sbjct: 84 GFVIHDDARAWDSSLTVG------EGLYLTTSRDI---LEAMARGE-GPANAVVTLGCAG 133
Query: 254 WEKEQLNEEIRAGYW 268
W QL E+ W
Sbjct: 134 WGAGQLESELSENSW 148
>gi|332307598|ref|YP_004435449.1| hypothetical protein Glaag_3247 [Glaciecola sp. 4H-3-7+YE-5]
gi|332174927|gb|AEE24181.1| protein of unknown function DUF179 [Glaciecola sp. 4H-3-7+YE-5]
Length = 185
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 16/152 (10%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
+ LLIA ++ + F R+V I G G+++N+P+ MS+KE+ + A +
Sbjct: 5 QNYLLIAMPSMEDPY-FSRSVTYICEHNEQGAMGLVINQPAGMSLKELINQTNKDALVDA 63
Query: 182 DRP---LFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
D+ + GGP+ + G L + + G S E + +K+ +
Sbjct: 64 DKAQEIVLAGGPVSQDRGFILHTTQPGW-----SASLALTSEIMVTTSKDILSSLG---- 114
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYW 268
N+ P+ G GW QL EEIR W
Sbjct: 115 -NSEAPDKSIVTLGYAGWSAGQLEEEIRENSW 145
>gi|407893866|ref|ZP_11152896.1| hypothetical protein Dmas2_07490 [Diplorickettsia massiliensis 20B]
Length = 206
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 61/151 (40%), Gaps = 21/151 (13%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVL--------DAAGTFSDRPLFFGG 189
F R+V+ I G GI++N+P L S++ S +L D + D P+ GG
Sbjct: 37 FNRSVVYICEHSDRGAVGIVVNQP-LQSLRANLSEILKIFIEGMTDINELYDDYPVLCGG 95
Query: 190 PL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRF 247
P+ E G L P G + S F E + + + A GPE F F
Sbjct: 96 PVHPERGFVLHRP---GTKWQSS--FNLSNEVCITASNDILQAIARQE-----GPEKFIF 145
Query: 248 FDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G W Q+ +EI W +PS++
Sbjct: 146 SLGYASWVPGQIEKEIIENTWLTVPATPSIL 176
>gi|417703722|ref|ZP_12352826.1| hypothetical protein SFK218_3951 [Shigella flexneri K-218]
gi|417739807|ref|ZP_12388381.1| hypothetical protein SF434370_3169 [Shigella flexneri 4343-70]
gi|332752991|gb|EGJ83375.1| hypothetical protein SF434370_3169 [Shigella flexneri 4343-70]
gi|333000105|gb|EGK19688.1| hypothetical protein SFK218_3951 [Shigella flexneri K-218]
Length = 187
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 21/169 (12%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
IF R+V+ I G GII+N+P ++ ++ D + D+P+ GG
Sbjct: 18 IFRRSVVYICEHNTNGAMGIIVNKPLENLKIEGILEKLKITPEPRDESIRL-DKPVMLGG 76
Query: 190 PLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRF 247
PL E G L +P + + + + ET+G + P D
Sbjct: 77 PLAEDRGFILHTPPS--NFASSIRISDNTVMTTSRDVLETLGTDKQ--------PSDVLV 126
Query: 248 FDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G WEK QL +EI W A +++ ++ G W E L+G
Sbjct: 127 ALGYASWEKGQLEQEILDNAWLTAPADLNIL-FKTPIAGRWREAAKLIG 174
>gi|292487085|ref|YP_003529955.1| hypothetical protein EAMY_0597 [Erwinia amylovora CFBP1430]
gi|292900530|ref|YP_003539899.1| hypothetical protein EAM_2832 [Erwinia amylovora ATCC 49946]
gi|428784013|ref|ZP_19001506.1| UPF0301 protein [Erwinia amylovora ACW56400]
gi|291200378|emb|CBJ47506.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946]
gi|291552502|emb|CBA19547.1| UPF0301 protein ECA3925 [Erwinia amylovora CFBP1430]
gi|312171188|emb|CBX79447.1| UPF0301 protein ECA3925 [Erwinia amylovora ATCC BAA-2158]
gi|426277728|gb|EKV55453.1| UPF0301 protein [Erwinia amylovora ACW56400]
Length = 187
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 26/154 (16%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F+R+V+ I G G+I+N+P ++ ++ D A D+P+F GG
Sbjct: 18 LFKRSVVYICEHSADGAMGLIVNKPMENLTVEGILKKLKISPDARDPALRL-DKPVFAGG 76
Query: 190 PLEE--GLFLVSPKG---GGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPED 244
PL E G L S + V + V + L ET+G + P++
Sbjct: 77 PLAEDRGFILHSAQTLFTSSIRVSDNTVITTSRDVL-----ETLGTPEQ--------PDN 123
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G C WEK QL +E+ W A +++
Sbjct: 124 VLVALGYCAWEKGQLEQELLENAWLTTAADSNIL 157
>gi|114771325|ref|ZP_01448745.1| hypothetical protein OM2255_08210 [Rhodobacterales bacterium
HTCC2255]
gi|114548250|gb|EAU51137.1| hypothetical protein OM2255_08210 [Rhodobacterales bacterium
HTCC2255]
Length = 188
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 14/152 (9%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSL-MSIKEM-RSTVLDAAGTF 180
G LLIA + G F+++VI + S G GII+N+PS+ + + ++ + + G
Sbjct: 9 GKLLIAMPGI-GDQNFDKSVIYMCSHSEDGAMGIIVNKPSIDLKLSDLFKQLSIAPVGLI 67
Query: 181 SDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK--RN 238
S + GGP+E G + D V K L + ++ + E+++
Sbjct: 68 SSETVHIGGPVEHGRGFILHS--SDYVAKD-------SSLNVTDRISMTASLEILEDISK 118
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270
GP ++ G GW QL EI+A W +
Sbjct: 119 GKGPSNYLLSLGYSGWGPGQLEAEIQANGWLI 150
>gi|134294910|ref|YP_001118645.1| hypothetical protein Bcep1808_0798 [Burkholderia vietnamiensis G4]
gi|387901514|ref|YP_006331853.1| YqgE protein [Burkholderia sp. KJ006]
gi|166228870|sp|A4JC07.1|Y798_BURVG RecName: Full=UPF0301 protein Bcep1808_0798
gi|134138067|gb|ABO53810.1| protein of unknown function DUF179 [Burkholderia vietnamiensis G4]
gi|387576406|gb|AFJ85122.1| YqgE protein [Burkholderia sp. KJ006]
Length = 192
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 30/154 (19%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGPL--E 192
F TV+ + G G+++NRP+ + ++ + + + LD P++FGGP+ E
Sbjct: 26 FSGTVVYLCDHSERGALGLVINRPTDIDLESLFNRIDLKLDIEPLLH-IPVYFGGPVQTE 84
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV--------GPED 244
G L P +EG + + ++ EM V GP+
Sbjct: 85 RGFVLHEP----------------VEGANYNSSMSIEGGLEMTTSKDVLEAVATGTGPKR 128
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
F G GW QL EEI W P ++
Sbjct: 129 FLLTLGHAGWGAGQLEEEISRNGWLTVPADPRIV 162
>gi|429082820|ref|ZP_19145876.1| UPF0301 protein YqgE [Cronobacter condimenti 1330]
gi|426548346|emb|CCJ71917.1| UPF0301 protein YqgE [Cronobacter condimenti 1330]
Length = 189
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 68/170 (40%), Gaps = 23/170 (13%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F R+V+ I G GII+N+P ++ ++ D A D+P+F GG
Sbjct: 20 LFRRSVVYICEYNDEGAMGIIINKPLENLQVEGVLQKLKITPEPRDPAIRL-DKPVFLGG 78
Query: 190 PLEE--GLFLVSPKGGGDEVGKS-GVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFR 246
PL E G L +P D S + + + ET+G A + P +
Sbjct: 79 PLAEDRGFILHTPP---DSFSSSIRISDNTVITTSRDVLETLGTAEQ--------PPEVL 127
Query: 247 FFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G WEK QL EEI W A +++ + W E L+G
Sbjct: 128 VALGYSSWEKGQLEEEILENAWLTAPADLNIL-FRTPIADRWREAAKLIG 176
>gi|227115171|ref|ZP_03828827.1| hypothetical protein PcarbP_19528 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 187
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F+R+V+ I G G+I+N+P +++ ++ T D A D+P+F GG
Sbjct: 18 VFKRSVVYICEHNEDGAMGLIINKPMDQFSVENVLKKLKIDPTPRDPAIRL-DKPVFIGG 76
Query: 190 PL--EEGLFLVSP-KGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFR 246
PL + G L +P G G + S E M ET+G + P++
Sbjct: 77 PLADDRGFILHTPCPGFGSSISIS---EDTMITTSKDVLETLGTPNQ--------PKNTL 125
Query: 247 FFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G WE QL EE+ W ++
Sbjct: 126 VALGYSAWENGQLEEELLDNAWLTTPADKDIL 157
>gi|302339605|ref|YP_003804811.1| hypothetical protein Spirs_3119 [Spirochaeta smaragdinae DSM 11293]
gi|301636790|gb|ADK82217.1| protein of unknown function DUF179 [Spirochaeta smaragdinae DSM
11293]
Length = 206
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 22/164 (13%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVL-DAAGTFS 181
G LL+A + + F +T + +L+ + G G+++NRPS +TVL DA
Sbjct: 24 GHLLVAESSMTDPN-FSQTAVFLLNHDKDGAMGLVINRPS--------TTVLGDAVEELG 74
Query: 182 DRP-----LFFGGPLEEGLFLVSPKG--GGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
+ P +F GGP+++ V G GG KS + G+ F +V A
Sbjct: 75 ETPWREELIFVGGPVQQYFVFVLHTGLPGGK---KSPAAIEATPGVIFEPDFSVVKPA-- 129
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ R RF G GW QL E+ W V SP ++
Sbjct: 130 LNREGTINLKARFLVGYAGWAPGQLEVELARKDWIVIPGSPELV 173
>gi|254386637|ref|ZP_05001934.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194345479|gb|EDX26445.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 192
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 72/159 (45%), Gaps = 17/159 (10%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+AT L + F+R V+L+L + G G++LNRP+ + + ++ +L A D
Sbjct: 15 GRLLVATPALADPN-FDRAVVLLLDHDEQGSLGVVLNRPTPVGVGDV---LLPWAALAGD 70
Query: 183 RPLFF-GGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+ F GGP L+ L + G E G G + +V + E A + A
Sbjct: 71 PGVVFQGGPVALDSALGIAVIPG---EEGPLG-WRRVHGAIGLVDLE----APPELLAAA 122
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+G R F G GW QL +E+ G W V P I
Sbjct: 123 LG--SLRIFAGYSGWGPGQLEDELGDGAWYVVESEPGDI 159
>gi|399156525|ref|ZP_10756592.1| hypothetical protein SclubSA_06330 [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 183
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 14/146 (9%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRP 184
+L+A L + F ++VIL+ + G G+++N P+ +KE+ S + +D P
Sbjct: 9 ILVAMPTLKDTY-FNKSVILLCRYDEEGAFGLVMNHPTTTLVKEILSDEM-KENIAADIP 66
Query: 185 LFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP-- 242
L GGP++ F S F V E K + A +++ A G
Sbjct: 67 LLLGGPVQPESFWAV---------HSSDF-SVEETTILSPKINLSSAQDVLYSLANGQDV 116
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYW 268
+ + F G GW QL+ EI+ W
Sbjct: 117 QSYHFGSGYAGWGAGQLDREIQEESW 142
>gi|269128079|ref|YP_003301449.1| hypothetical protein Tcur_3882 [Thermomonospora curvata DSM 43183]
gi|268313037|gb|ACY99411.1| protein of unknown function DUF179 [Thermomonospora curvata DSM
43183]
Length = 191
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 67/156 (42%), Gaps = 17/156 (10%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSM-EPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS 181
G LL+AT L+ + F RTV+LI E G G++LNRP + + R A T S
Sbjct: 8 GRLLVATPHLEDPN-FRRTVVLIAEHDENEGTLGVVLNRP--LEVPVDRVLPPWAELTTS 64
Query: 182 DRPLFFGGPL--EEGLFLVSPKGGGDEVG---KSGVFEQVMEGLYFGTKETVGCAAEMVK 236
+F GGP+ + L L G + +G G E GL AAE+++
Sbjct: 65 PSVVFQGGPVAVDTPLALARVPGTEEPLGWRALDGDTEVGRVGLVDLDAPPALIAAEIIQ 124
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAA 272
R F G GW QL EI G W V A
Sbjct: 125 --------MRVFAGYAGWAPGQLRAEIAEGAWYVVA 152
>gi|383317534|ref|YP_005378376.1| putative transcriptional regulator [Frateuria aurantia DSM 6220]
gi|379044638|gb|AFC86694.1| putative transcriptional regulator [Frateuria aurantia DSM 6220]
Length = 208
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 64/160 (40%), Gaps = 15/160 (9%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTF 180
G LIA LD F R V L+ G G+++NR S S+ ++ + + A
Sbjct: 30 GQFLIAMPNLDDPS-FNRGVTLVCQHNEEGALGLLINRQSEYSLADILEQMQLEYQAPEL 88
Query: 181 SDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
+D P+ GGPL E G L +E G +V + T + A +
Sbjct: 89 ADVPVLIGGPLQQERGFVL------HEEPGYWEASYRVNQTWSVTTSRDILVAIAAGQ-- 140
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GP G GW+ QL +E++ W A S V+
Sbjct: 141 --GPAKALLVLGYAGWDAGQLEQELKDNAWLTAEASHQVV 178
>gi|170730548|ref|YP_001775981.1| hypothetical protein Xfasm12_1428 [Xylella fastidiosa M12]
gi|226734157|sp|B0U3C2.1|Y1428_XYLFM RecName: Full=UPF0301 protein Xfasm12_1428
gi|167965341|gb|ACA12351.1| transcriptional regulator [Xylella fastidiosa M12]
Length = 188
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 64/159 (40%), Gaps = 17/159 (10%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSD 182
LLIA + H F R V LI + G G++LNRPS ++ E+ + + A+ T +
Sbjct: 12 LLIALPSMPDPH-FARGVALICQHDSNGSMGVVLNRPSEYTLGEVLFQMGIETASETLRE 70
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVM---EGLYFGTKETVGCAAEMVKRNA 239
+ + GGP V P G V+ + +GLY T V A
Sbjct: 71 QVVLAGGP-------VHPDRGFVIYHSEHVWGPSLLIGDGLYLTTSRDVLAA----MAEG 119
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GP GC GW QL E+ W + S++
Sbjct: 120 SGPSRALVALGCAGWAAGQLELELVENNWLMVPADASLL 158
>gi|254523724|ref|ZP_05135779.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14]
gi|219721315|gb|EED39840.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14]
Length = 188
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 14/135 (10%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPL--EE 193
F R+V LI + G G+++N+PS ++ E+ + + G R + GGP+ E
Sbjct: 24 FARSVALICQHDENGAMGVLVNQPSEYTLGEVLAQMDITTGDGDLQARMVLNGGPVHPER 83
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
G + D G EGLY T + E + R GP + GC G
Sbjct: 84 GFVIHDDARAWDSSLTVG------EGLYLTTSRDI---LEAMARGE-GPANAVVTLGCAG 133
Query: 254 WEKEQLNEEIRAGYW 268
W QL E+ W
Sbjct: 134 WGAGQLESELAENSW 148
>gi|254508615|ref|ZP_05120731.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
gi|219548466|gb|EED25475.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
Length = 174
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 29/172 (16%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS-------DRPLFFGGP 190
FER+VI + G G+++N P +++ +M V D D+P+ GGP
Sbjct: 6 FERSVIYVCEHNDEGAMGLMINAPIDVTVGKMLKQV-DVQSVHPQLFTDSLDKPVLKGGP 64
Query: 191 L--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETV----GCAAEMVKRNAVGPED 244
+ + G L PK DE S Q+ + + T + G AE P +
Sbjct: 65 VSSDRGFILHQPK---DEYESSI---QMTDSISVTTSRDILTVLGTEAE--------PNE 110
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
+ G GWE QL E+ W P VI + W++ + ++G
Sbjct: 111 YLVALGYSGWEPGQLESELSDNSWLTIEADPDVI-FNTPIAERWQKAVQMLG 161
>gi|329296974|ref|ZP_08254310.1| hypothetical protein Pstas_11152 [Plautia stali symbiont]
Length = 187
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 70/174 (40%), Gaps = 33/174 (18%)
Query: 138 FERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGGP 190
F+R+V+ I G G+I+N+P ++ ++ + D A D+P+F GGP
Sbjct: 19 FKRSVVYICEYNEEGAMGLIVNKPLDNLTVEGILKKLKISPSERDPAIKL-DKPVFAGGP 77
Query: 191 LEE--GLFLVSPK---GGGDEVGKSGVF---EQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
L E G L S + + + V V+E + GT+E P
Sbjct: 78 LAEDRGFILHSAQRVFSSSIRISDNTVITTSRDVLEAI--GTREQ--------------P 121
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
E+ G C WEK+QL E+ W + ++ ++ W E MG
Sbjct: 122 ENVLVALGYCAWEKDQLENELLENAWLTTPANTQIL-FQTPIAERWREAARSMG 174
>gi|56461318|ref|YP_156599.1| transcriptional regulator [Idiomarina loihiensis L2TR]
gi|81362499|sp|Q5QVM4.1|Y2218_IDILO RecName: Full=UPF0301 protein IL2218
gi|56180328|gb|AAV83050.1| Transcription regulator [Idiomarina loihiensis L2TR]
Length = 185
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 16/162 (9%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRS---TVLDAAG 178
+ LLIAT L+ +F+RTV I G G+++N+P+ +S+ + V
Sbjct: 5 QNHLLIATPMLNDP-MFKRTVTYICEHNEEGAMGLVINQPADLSVTSLLDKLEIVYPENN 63
Query: 179 TFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
++ GGP+ E G + P+ K + + +M E +G +A
Sbjct: 64 QHLQGSVYQGGPVGRERGFVIHPPQDNWRASQK--MSDDIMVTTSRDILEALGSSA---- 117
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
P F G GWE QL EE+ W P ++
Sbjct: 118 ----APPQFLLTLGYAGWEAGQLEEELGENSWLAIPADPELL 155
>gi|338732974|ref|YP_004671447.1| hypothetical protein SNE_A10790 [Simkania negevensis Z]
gi|336482357|emb|CCB88956.1| UPF0301 protein pc1755 [Simkania negevensis Z]
Length = 189
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 79/182 (43%), Gaps = 16/182 (8%)
Query: 119 EPEKGCLLIATEKL-DGVHIFERTVILILSMEPMGPSGIILNRPSLMSI-KEMRSTVLDA 176
E +KG LIA+ ++ DG +F R+V+L+ P+G GII+N+ M + +EM + A
Sbjct: 8 ELKKGSFLIASPEVNDG--LFFRSVVLLCDQSPVGSFGIIINKSLDMDVPEEMLNLGELA 65
Query: 177 AGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVK 236
S R GGP + ++ D S ++ EG+Y G + C EM
Sbjct: 66 DANISIRA---GGPNQPNQIMLIHSHKQD----SDSNLKICEGVYLGGD--LECIHEMT- 115
Query: 237 RNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
P G GW L E +G W + S + E+ LW+ LL MG
Sbjct: 116 -TCPEPPSLLMCLGYSGWGAGLLEREFLSGAWYLHPASKKHV-FETPPTMLWQTLLREMG 173
Query: 297 RR 298
+
Sbjct: 174 GK 175
>gi|431931861|ref|YP_007244907.1| transcriptional regulator [Thioflavicoccus mobilis 8321]
gi|431830164|gb|AGA91277.1| putative transcriptional regulator [Thioflavicoccus mobilis 8321]
Length = 187
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 18/147 (12%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRST--VLDAAGTFSDRPLFFGGPLE--E 193
F RTV + G GI++NRP + + + S ++ T SDR +F GGP++
Sbjct: 23 FSRTVTYVCEHTEEGAMGIVINRPMDIRLGVVLSQLDIVSGDSTVSDRLVFLGGPVQPDR 82
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR--NAVGPEDFRFFDGC 251
G L S GDE F+ M + + + ++++ + GP G
Sbjct: 83 GFVLHS----GDEQ-----FDSTMS---IAPEINITTSRDILEAIADGRGPNRHLIALGY 130
Query: 252 CGWEKEQLNEEIRAGYWTVAACSPSVI 278
GW QL EE+ A W ++I
Sbjct: 131 AGWGGGQLEEEMSANTWLSGPADETII 157
>gi|166154421|ref|YP_001654539.1| hypothetical protein CTL0463 [Chlamydia trachomatis 434/Bu]
gi|166155296|ref|YP_001653551.1| hypothetical protein CTLon_0458 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301335680|ref|ZP_07223924.1| hypothetical protein CtraL_02600 [Chlamydia trachomatis L2tet1]
gi|339625867|ref|YP_004717346.1| hypothetical protein CTL2C_725 [Chlamydia trachomatis L2c]
gi|226706206|sp|B0BBJ1.1|Y458_CHLTB RecName: Full=UPF0301 protein CTLon_0458
gi|226706213|sp|B0B9W1.1|Y463_CHLT2 RecName: Full=UPF0301 protein CTL0463
gi|165930409|emb|CAP03902.1| conserved hypothetical protein [Chlamydia trachomatis 434/Bu]
gi|165931284|emb|CAP06856.1| conserved hypothetical protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|339461141|gb|AEJ77644.1| conserved hypothetical protein [Chlamydia trachomatis L2c]
gi|440526012|emb|CCP51496.1| hypothetical protein L2B8200_00214 [Chlamydia trachomatis
L2b/8200/07]
gi|440535837|emb|CCP61350.1| hypothetical protein L2B795_00215 [Chlamydia trachomatis L2b/795]
gi|440536728|emb|CCP62242.1| hypothetical protein L1440_00216 [Chlamydia trachomatis L1/440/LN]
gi|440537619|emb|CCP63133.1| hypothetical protein L11322_00215 [Chlamydia trachomatis
L1/1322/p2]
gi|440538508|emb|CCP64022.1| hypothetical protein L1115_00214 [Chlamydia trachomatis L1/115]
gi|440539397|emb|CCP64911.1| hypothetical protein L1224_00214 [Chlamydia trachomatis L1/224]
gi|440540288|emb|CCP65802.1| hypothetical protein L225667R_00215 [Chlamydia trachomatis
L2/25667R]
gi|440541177|emb|CCP66691.1| hypothetical protein L3404_00214 [Chlamydia trachomatis L3/404/LN]
gi|440542065|emb|CCP67579.1| hypothetical protein L2BUCH2_00214 [Chlamydia trachomatis
L2b/UCH-2]
gi|440542956|emb|CCP68470.1| hypothetical protein L2BCAN2_00215 [Chlamydia trachomatis
L2b/Canada2]
gi|440543847|emb|CCP69361.1| hypothetical protein L2BLST_00214 [Chlamydia trachomatis L2b/LST]
gi|440544737|emb|CCP70251.1| hypothetical protein L2BAMS1_00214 [Chlamydia trachomatis L2b/Ams1]
gi|440545627|emb|CCP71141.1| hypothetical protein L2BCV204_00214 [Chlamydia trachomatis
L2b/CV204]
gi|440913889|emb|CCP90306.1| hypothetical protein L2BAMS2_00214 [Chlamydia trachomatis L2b/Ams2]
gi|440914779|emb|CCP91196.1| hypothetical protein L2BAMS3_00214 [Chlamydia trachomatis L2b/Ams3]
gi|440915671|emb|CCP92088.1| hypothetical protein L2BCAN1_00216 [Chlamydia trachomatis
L2b/Canada1]
gi|440916565|emb|CCP92982.1| hypothetical protein L2BAMS4_00215 [Chlamydia trachomatis L2b/Ams4]
gi|440917455|emb|CCP93872.1| hypothetical protein L2BAMS5_00215 [Chlamydia trachomatis L2b/Ams5]
Length = 189
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 24/184 (13%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRS-TVLDAAGT 179
+KG LL+A+ ++G IF R+V+L+ P G G+ILN+ I E+ S +
Sbjct: 10 DKGSLLVASPDVNG-GIFSRSVVLLCEHSPNGSFGLILNK-----ILEIDSPEEIFPLDH 63
Query: 180 FSDRPLFF--GGPLEEG---LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
F + + F GGPL+ L SP + ++ ++ G + E
Sbjct: 64 FDESKVRFCMGGPLQANQIMLLHTSPDSANSSI-------EICPSVFLGGDFSFAGEKEG 116
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWL 294
R+ + G GW+ QL +E G W +A S +I +W ++L
Sbjct: 117 RTRD----DKMLLCFGYSGWQGGQLEKEFLEGLWFLAPSSQEII-FTDAPERMWSDVLQH 171
Query: 295 MGRR 298
+G R
Sbjct: 172 LGGR 175
>gi|221640490|ref|YP_002526752.1| hypothetical protein RSKD131_2391 [Rhodobacter sphaeroides KD131]
gi|254801315|sp|B9KNE5.1|Y2391_RHOSK RecName: Full=UPF0301 protein RSKD131_2391
gi|221161271|gb|ACM02251.1| Hypothetical Protein RSKD131_2391 [Rhodobacter sphaeroides KD131]
Length = 184
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 71/179 (39%), Gaps = 15/179 (8%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRP--SLMSIKEMRSTVLDAAGT 179
G LLIA + FER+++LI + P G G+++N+P L + + A
Sbjct: 4 SGSLLIAMPSMADPR-FERSLVLICAHSPDGAMGLVINKPVEDLSFAGMLEQLNIPRAPN 62
Query: 180 FSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
D + GGP+E G L SP V ++ FG TV + +
Sbjct: 63 GRDIRVHLGGPMERGRGFVLHSPD-------YMSVGATMLVSGKFGMTATVDILEALARG 115
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
GP G GW Q+ E++ W + A +PS + G W +L MG
Sbjct: 116 Q--GPSSALMALGYSGWGPGQVEAEVQRNDW-LTAEAPSELVFSDDDPGKWTGMLRHMG 171
>gi|384920289|ref|ZP_10020302.1| hypothetical protein C357_14162 [Citreicella sp. 357]
gi|384465827|gb|EIE50359.1| hypothetical protein C357_14162 [Citreicella sp. 357]
Length = 191
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 75/181 (41%), Gaps = 21/181 (11%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPS--LMSIKEMRSTVLDAAGTF 180
G +LIA + G FE VI + + G G+I+N+PS + + +DAA
Sbjct: 12 GRILIAMPGM-GDPRFEHAVIYMCAHSDEGAMGLIVNKPSEDVTMAGLLEQLSMDAAPGL 70
Query: 181 SDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYF--GTKETV-GCAAEMV 235
R + FGGP+E G L SP SG+ ++ + GT + + G A E
Sbjct: 71 ERRQVHFGGPVEMGRGFVLHSPDY------ASGLTTLKVDDAFHMTGTLDVLEGIAVE-- 122
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLM 295
GP + G GW QL E+ W V SP ++ + WE L M
Sbjct: 123 ----EGPAQWMAMLGYAGWGPGQLETELTQNAWLVCEASPELV-FGTADSSKWEAALNSM 177
Query: 296 G 296
G
Sbjct: 178 G 178
>gi|227326190|ref|ZP_03830214.1| hypothetical protein PcarcW_02263 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 187
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F+R+V+ I G G+I+N+P +++ ++ T D A D+P+F GG
Sbjct: 18 VFKRSVVYICEHNEDGAMGLIINKPMDQFSVENVLKKLKIDPTPRDPAIRL-DKPVFIGG 76
Query: 190 PL--EEGLFLVSP-KGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFR 246
PL + G L +P G G + S E M ET+G + P++
Sbjct: 77 PLADDRGFILHTPCPGFGSSISIS---EDTMITTSKDVLETLGTPNQ--------PKNTL 125
Query: 247 FFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G WE QL EE+ W ++
Sbjct: 126 VALGYSAWENGQLEEELLENAWLTTPADKEIL 157
>gi|378581211|ref|ZP_09829861.1| uncharacterized DUF179 family protein [Pantoea stewartii subsp.
stewartii DC283]
gi|377816290|gb|EHT99395.1| uncharacterized DUF179 family protein [Pantoea stewartii subsp.
stewartii DC283]
Length = 187
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 57/152 (37%), Gaps = 24/152 (15%)
Query: 138 FERTVILILSMEPMGPSGIILNRP-----------SLMSIKEMRSTVLDAAGTFSDRPLF 186
F+R+V+ I G G+I+N+P L +E R ++ D+P+F
Sbjct: 19 FKRSVVYICEHNEEGAMGLIINKPMENLTVEGILKKLKIAEENRDPAINL-----DKPVF 73
Query: 187 FGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFR 246
GGPL E + V + + E +G A + P+
Sbjct: 74 SGGPLAEDRGFILHSAQRTFTSSIRVSDNTVITTSRDVLEAIGTADQ--------PDHVL 125
Query: 247 FFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G C WEK+QL E+ W + +++
Sbjct: 126 VALGYCAWEKDQLENELMENAWLTTPANSNIL 157
>gi|182438379|ref|YP_001826098.1| hypothetical protein SGR_4586 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178466895|dbj|BAG21415.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 186
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 64/155 (41%), Gaps = 15/155 (9%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+A L + F+R V+L+L + G G+ILNRP+ + + ++ ++ A T
Sbjct: 9 GRLLVAAPALTDPN-FDRAVVLLLDHDEEGSLGVILNRPTPVGVGDILASW--AGLTGEP 65
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
+F GGP+ L GDE G G + +G +GP
Sbjct: 66 DVVFQGGPVSLDSALGVAVIPGDE-GPLG---------WRRVHGAIGLVDLETPPELLGP 115
Query: 243 E--DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSP 275
R F G GW QL E+ G W V P
Sbjct: 116 ALGSLRIFAGYAGWGPGQLEGELNEGAWYVVESEP 150
>gi|429094160|ref|ZP_19156713.1| UPF0301 protein YqgE [Cronobacter dublinensis 1210]
gi|429097867|ref|ZP_19159973.1| UPF0301 protein YqgE [Cronobacter dublinensis 582]
gi|426284207|emb|CCJ86086.1| UPF0301 protein YqgE [Cronobacter dublinensis 582]
gi|426740878|emb|CCJ82826.1| UPF0301 protein YqgE [Cronobacter dublinensis 1210]
Length = 189
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 68/172 (39%), Gaps = 27/172 (15%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F R+V+ I G G+I+N+P ++ ++ D A D+P+F GG
Sbjct: 20 LFRRSVVYICEYNDEGAMGLIINKPLENLQVEGVLQKLKITPEPRDPAIRL-DKPVFLGG 78
Query: 190 PLEE--GLFLVSPK---GGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPED 244
PL E G L +P + + V + L ET+G A + P D
Sbjct: 79 PLAEDRGFILHTPPDMFSSSIRISDNTVITTSRDVL-----ETLGTAEQ--------PAD 125
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G WEK QL EE+ W A +++ + W E L+G
Sbjct: 126 VLVALGYSSWEKGQLEEELLENAWLTAPADLNIL-FRTPIADRWREAAKLIG 176
>gi|343498047|ref|ZP_08736093.1| hypothetical protein VINI7043_12676 [Vibrio nigripulchritudo ATCC
27043]
gi|342815270|gb|EGU50193.1| hypothetical protein VINI7043_12676 [Vibrio nigripulchritudo ATCC
27043]
Length = 187
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 26/153 (16%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAA----GTFS-DRPLFFGGPL 191
F+RTV+ + G GI++N P +S+ M V +D T S ++P+ GGP+
Sbjct: 19 FKRTVVYLCEHSDDGAMGIVINAPIDISVGGMLKQVEVDPVHPQLNTDSLEKPVLNGGPV 78
Query: 192 EE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETV----GCAAEMVKRNAVGPEDF 245
E G L PK + +S + Q+ + L T + + G AE P+++
Sbjct: 79 AEDRGFILHEPK----DHYQSSI--QMTQSLAVTTSKDILSVLGTEAE--------PDNY 124
Query: 246 RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GWE QL E+ W P+VI
Sbjct: 125 VVALGYSGWEAGQLESELADNSWLTIEADPNVI 157
>gi|345300760|ref|YP_004830118.1| hypothetical protein Entas_3618 [Enterobacter asburiae LF7a]
gi|345094697|gb|AEN66333.1| UPF0301 protein yqgE [Enterobacter asburiae LF7a]
Length = 186
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 62/150 (41%), Gaps = 19/150 (12%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP----SLMSIKE-MRSTVLDAAGTFS-DRPLFFGGP 190
IF R+V+ I G GII+N+P + I E ++ T + D+P+ GGP
Sbjct: 18 IFRRSVVYICEYNEDGAMGIIINKPLENLQIEGILEKLKITTEERLPEIRLDKPVMLGGP 77
Query: 191 LEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFF 248
L E G L +P G + S + + ET+G A + P +
Sbjct: 78 LAEDRGFILHTPPGFSSSIRIS---DNTVVTTSRDVLETLGTAEQ--------PSEVLVA 126
Query: 249 DGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G WEK QL +EI W A +++
Sbjct: 127 LGYASWEKGQLEQEILDNAWLTAPADLNIL 156
>gi|398794316|ref|ZP_10554422.1| putative transcriptional regulator [Pantoea sp. YR343]
gi|398208851|gb|EJM95551.1| putative transcriptional regulator [Pantoea sp. YR343]
Length = 187
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 26/154 (16%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F+R+V+ I G G+I+N+P ++ ++ ++ D A D+P+F GG
Sbjct: 18 LFKRSVVYICEHNEDGAMGLIVNKPMDNLTVEGILKKLKISASERDPAIKL-DKPVFAGG 76
Query: 190 PLEE--GLFLVSPK---GGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPED 244
PL E G L S + + + V + L E +G ++ P++
Sbjct: 77 PLAEDRGFILHSAQRIYSSSIRISDTTVITTSRDVL-----EAIGTTSQ--------PDN 123
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G C WEK QL +E+ W + + +++
Sbjct: 124 VLVALGYCAWEKGQLEDELLENAWLTSPANTNIL 157
>gi|85711781|ref|ZP_01042837.1| Transcription regulator [Idiomarina baltica OS145]
gi|85694396|gb|EAQ32338.1| Transcription regulator [Idiomarina baltica OS145]
Length = 185
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 69/163 (42%), Gaps = 18/163 (11%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV----LDAA 177
+ LIAT ++ +F R+V I G G+I+N+P+ +++ + + D+A
Sbjct: 5 QNHFLIATPSMND-PLFRRSVTYICEHNEDGAMGLIINQPAELTVNSLLDKLEIVYPDSA 63
Query: 178 GTFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
+ P++ GGP+ E G + P+ K + +++M E +G +A
Sbjct: 64 DSLKG-PVYQGGPVGQERGFVIHPPQQNWRSSLK--LSDEIMVTTSRDILEALGSSA--- 117
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
P F G GWE QL +E+ W P ++
Sbjct: 118 -----APLQFLLTLGYAGWEAGQLEQELAENSWLAIPADPEIL 155
>gi|319795848|ref|YP_004157488.1| hypothetical protein Varpa_5221 [Variovorax paradoxus EPS]
gi|315598311|gb|ADU39377.1| protein of unknown function DUF179 [Variovorax paradoxus EPS]
Length = 199
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPL--EE 193
F R+V+ + G G+++N+PS +++K + + + + + P+F GGP+ E
Sbjct: 26 FNRSVVYLCEHSERGALGLVINKPSDINLKVLFEKIELHLSRPELGEAPVFQGGPVQTER 85
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVME---GLYFGTKETVGCAAEMVKRNAVGPEDFRFFDG 250
G L P E + V+ M GL T + V A GP G
Sbjct: 86 GFVLHEPVFAHAEKPEESVYASTMTIPGGLEMTTSKDVLEAL----ATGAGPRKVLVSLG 141
Query: 251 CCGWEKEQLNEEIRAGYWTVAACSPSVI 278
W + QL E+ W + P+VI
Sbjct: 142 YSAWGEGQLESELAENSWLTVSADPAVI 169
>gi|90409105|ref|ZP_01217227.1| hypothetical protein PCNPT3_05024 [Psychromonas sp. CNPT3]
gi|90309779|gb|EAS37942.1| hypothetical protein PCNPT3_05024 [Psychromonas sp. CNPT3]
Length = 207
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 67/172 (38%), Gaps = 24/172 (13%)
Query: 116 TIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLD 175
TI K LIA L + F+++V+ + + G G I+N P +SI+++ L
Sbjct: 21 TILSTLKDHFLIAMPTLTDPY-FKQSVVYLCEHDAQGAMGFIINFPVKLSIQDL----LK 75
Query: 176 AAGTFSDRP-------LFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKE 226
T +P ++ GGPLE G L SP + S Q+ + L
Sbjct: 76 NVDTIKHQPQPPLTQSVYLGGPLELERGFVLHSP------IADSSQSTQLNDDLLMSNSN 129
Query: 227 TVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
V + P+++ G W QL +E++ +W +I
Sbjct: 130 AVLS----ILGTDRAPDNYMVTLGYSSWSSGQLEQEMQDNHWLTIKSENDII 177
>gi|387887909|ref|YP_006318207.1| protein YqgE [Escherichia blattae DSM 4481]
gi|414594860|ref|ZP_11444493.1| hypothetical protein YqgE [Escherichia blattae NBRC 105725]
gi|386922742|gb|AFJ45696.1| protein YqgE [Escherichia blattae DSM 4481]
gi|403194165|dbj|GAB82145.1| hypothetical protein YqgE [Escherichia blattae NBRC 105725]
Length = 187
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 25/171 (14%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-SLMSIKEMRSTV-LDAA----GTFSDRPLFFGGP 190
+F RTV+ I G G+I+N+P ++++E+ + +D A D+P+F GGP
Sbjct: 18 LFRRTVVYICEYNEDGAMGLIINKPLEGLNVREVLDKLKIDPALRDPEARLDKPVFVGGP 77
Query: 191 LEE--GLFLVSPK---GGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDF 245
L E G L +P + + + + L ET+G + PE
Sbjct: 78 LAEDRGFILHTPPDIFSASIRISDNTIVTTSRDVL-----ETIGTDKQ--------PEHI 124
Query: 246 RFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G W++ QL +EI W A +++ ++ W E L+G
Sbjct: 125 LVALGYASWQRGQLEQEILDNAWLTAPADLNIL-FKTPIADRWREAAKLIG 174
>gi|167036034|ref|YP_001671265.1| hypothetical protein PputGB1_5045 [Pseudomonas putida GB-1]
gi|189040228|sp|B0KM20.1|Y5045_PSEPG RecName: Full=UPF0301 protein PputGB1_5045
gi|166862522|gb|ABZ00930.1| protein of unknown function DUF179 [Pseudomonas putida GB-1]
Length = 189
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 18/147 (12%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSI----KEMRSTVLDAAGTFSDRPLFFGGPLE- 192
F +T+ I+ G G+++NRP +S+ +++R + A T S P++ GGP++
Sbjct: 25 FAQTLTYIVEHNEHGAMGLVVNRPQELSLADILEQLRPDEMPPAST-SQVPIYQGGPVQT 83
Query: 193 -EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGC 251
G L S + S +EGL T + V A VGP+ G
Sbjct: 84 DRGFVLHSSEC-------SFQATVALEGLSLTTSQDVLLAIAA----GVGPKQSLITLGY 132
Query: 252 CGWEKEQLNEEIRAGYWTVAACSPSVI 278
GWE QL E+ W P +I
Sbjct: 133 AGWEAGQLEAELADNAWLNCPFDPEII 159
>gi|403510678|ref|YP_006642316.1| hypothetical protein B005_3239 [Nocardiopsis alba ATCC BAA-2165]
gi|402799429|gb|AFR06839.1| hypothetical protein B005_3239 [Nocardiopsis alba ATCC BAA-2165]
Length = 193
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 70/178 (39%), Gaps = 8/178 (4%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+A L F R+V+ I+ G G+ILNRP + + E+ D AG S
Sbjct: 8 GRLLVAAPLLQ-EDSFRRSVVFIVDDATDGALGVILNRPLELPVDEVMKGWGDHAG--SP 64
Query: 183 RPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
+F GGP+ + + DE V + G + VG +GP
Sbjct: 65 AVMFSGGPVGTDSGIALGRAAPDEAPPGWVPLEAPGGRS--VLDGVGVVDLDAPPEVLGP 122
Query: 243 --EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRR 298
R F G GW QL EI G W V + E+ GLW +L G R
Sbjct: 123 SLSGLRVFAGYAGWGPGQLAGEIEEGAWFVVDAHLGDLFGET-PEGLWPRVLRRQGGR 179
>gi|312141994|ref|YP_004009330.1| hypothetical protein REQ_47120 [Rhodococcus equi 103S]
gi|311891333|emb|CBH50654.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length = 185
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+++ +L F RTV+ +L G G++LNRPS S++E+ A
Sbjct: 5 GTLLLSSTEL-FEPTFRRTVVYMLEHNDAGSLGVVLNRPSETSVQEVLPQWAPLAAAPQA 63
Query: 183 RPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
+ GGP+ + L L + + G D G G+ G V A+ AV
Sbjct: 64 L--YIGGPVTRDAALCLATVRAGVDVSGVPGLRR------IDGRVVMVDLDADPEPIAAV 115
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTV-AACSPSVI 278
+ R F G GW QL+ EI W V +A + VI
Sbjct: 116 I-DGLRVFAGYAGWTIAQLDAEIDNDDWIVLSALASDVI 153
>gi|119775605|ref|YP_928345.1| putative transcriptional regulator [Shewanella amazonensis SB2B]
gi|119768105|gb|ABM00676.1| putative transcriptional regulator [Shewanella amazonensis SB2B]
Length = 189
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 69/167 (41%), Gaps = 24/167 (14%)
Query: 122 KGCLLIATEKL-DGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA--- 177
K LIA L DG F++TV+ + + G G+I+NRP MS++++ S LD
Sbjct: 7 KNHFLIAMPSLNDG--FFDKTVVYLCEHDAKGAMGLIINRPVGMSVRDLLSQ-LDLMPDE 63
Query: 178 ----GTFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCA 231
G +D+ L GGP+ E G L + + G + + + L T + A
Sbjct: 64 GILLGESADQVL-VGGPVNPERGFVLHTTQEGWANSSR------LTDELMLTTSRDILSA 116
Query: 232 AEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
K P F G GW QL EE+ W S ++
Sbjct: 117 IGTSK----APSHFMVALGYAGWSAGQLEEELAQNSWLTIPASDEIL 159
>gi|407693915|ref|YP_006818703.1| hypothetical protein B5T_00071 [Alcanivorax dieselolei B5]
gi|407251253|gb|AFT68360.1| UPF0301 protein [Alcanivorax dieselolei B5]
Length = 187
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 14/165 (8%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDA 176
H K LIA +LD + F+RTV ++ P G G+ LNRP+ +S+ ++ + + ++
Sbjct: 3 HNSLKHQFLIAMPQLDDPN-FDRTVTYVVEHNPEGAMGLTLNRPAGLSLHDILADMEIEV 61
Query: 177 AGTFSDR-PLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
S R + GGP+++ V + V L + + +++
Sbjct: 62 EVPPSSRHQVVAGGPIQQEAGFVLHR---------DVERHWQSTLMLADGLCMTTSRDIL 112
Query: 236 KRNAV--GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ AV GPE G GW + QL +E+ W +P ++
Sbjct: 113 EAIAVGEGPESTLVCLGYAGWSEGQLEQELADNVWLSTPSAPELV 157
>gi|149204615|ref|ZP_01881580.1| hypothetical protein RTM1035_09523 [Roseovarius sp. TM1035]
gi|149141874|gb|EDM29924.1| hypothetical protein RTM1035_09523 [Roseovarius sp. TM1035]
Length = 191
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 12/149 (8%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRP-SLMSIKEMRSTV-LDAAGTF 180
G LLIA + G F +V+L+ + P G G+I+N+P S + ++++ + + G
Sbjct: 12 GKLLIAMPGM-GDPRFAHSVVLLCAHSPDGAMGLIINKPTSDLRLRDLLEQLSIAPTGQT 70
Query: 181 SDRPLFFGGPLEEGL-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+ P+ FGGP+E G F++ +G + V E F T+ ++ +
Sbjct: 71 RNLPVHFGGPVEHGRGFVLHDRGYQSTLTSLEVNED------FAMTATLDILEDLAR--G 122
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYW 268
GP+ G GW QL E+ W
Sbjct: 123 TGPDRALLALGYAGWGPGQLESELAENGW 151
>gi|110680590|ref|YP_683597.1| hypothetical protein RD1_3419 [Roseobacter denitrificans OCh 114]
gi|118574349|sp|Q163D2.1|Y3419_ROSDO RecName: Full=UPF0301 protein RD1_3419
gi|109456706|gb|ABG32911.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 184
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 78/182 (42%), Gaps = 21/182 (11%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMR-STVLDAAGTF 180
+G LL+A + G F+ VILI + G G+I+N+P+ E+R S VLD
Sbjct: 4 EGKLLVAMPSM-GDPRFQNAVILICAHSAKGAMGLIINKPT----PEIRISDVLDQLDIL 58
Query: 181 SDRP-----LFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
S + + FGGP+E G V S + +++G FG T+ E+
Sbjct: 59 SSQKTREMVVHFGGPVETGRGFVLHS----TDYASSLNTLIVDG-AFGMTATLDILEEIA 113
Query: 236 KRNAVGPEDFRFFDGCCGWEKEQLNEEI-RAGYWTVAACSPSVIGLESGTLGLWEELLWL 294
+ GP G GW QL EI + G+ T A S V L + W E L
Sbjct: 114 --DGRGPAQALMMLGYAGWGGGQLENEIAQNGWLTTNATSDLVFDLPAAR--KWSEALHS 169
Query: 295 MG 296
+G
Sbjct: 170 LG 171
>gi|452127249|ref|ZP_21939832.1| hypothetical protein F783_17924 [Bordetella holmesii F627]
gi|452130623|ref|ZP_21943195.1| hypothetical protein H558_17758 [Bordetella holmesii H558]
gi|451920548|gb|EMD70694.1| hypothetical protein H558_17758 [Bordetella holmesii H558]
gi|451922344|gb|EMD72489.1| hypothetical protein F783_17924 [Bordetella holmesii F627]
Length = 199
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 56/142 (39%), Gaps = 15/142 (10%)
Query: 141 TVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPLE--EGLF 196
TVI I G G+++NRP+ +++ + R + G D +FFGGP++ G
Sbjct: 39 TVIYICEHSARGALGLVINRPTDLTLASLFERIELELEIGPVGDEKVFFGGPVQTDRGFV 98
Query: 197 LVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEK 256
L +P G K G L T V A + GP G GW
Sbjct: 99 LHAPVGDYSSSIKLGE-------LALTTSRDVLQAV----ADGNGPARMLITLGYAGWGA 147
Query: 257 EQLNEEIRAGYWTVAACSPSVI 278
QL E+ W A PSVI
Sbjct: 148 GQLESEMSQNAWLSVAADPSVI 169
>gi|312963614|ref|ZP_07778095.1| hypothetical protein PFWH6_5538 [Pseudomonas fluorescens WH6]
gi|311282123|gb|EFQ60723.1| hypothetical protein PFWH6_5538 [Pseudomonas fluorescens WH6]
Length = 189
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 14/135 (10%)
Query: 138 FERTVILILSMEPMGPSGIILNRP---SLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEG 194
F +T+ I+ G G+++NRP +L I E ++ P++ GGP++
Sbjct: 25 FAQTLTYIVEHTANGAMGLVVNRPQELNLADILEQLRPEVEPPARCQHVPIYIGGPVQTD 84
Query: 195 L-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
F++ P G + ++G+ T + V A + VGPE G G
Sbjct: 85 RGFVLHPTGPTFQATVD------LDGVSLSTSQDVLFAIA----DGVGPEQSVITLGYAG 134
Query: 254 WEKEQLNEEIRAGYW 268
WE QL E+ + W
Sbjct: 135 WEAGQLEAELASNAW 149
>gi|380513405|ref|ZP_09856812.1| hypothetical protein XsacN4_19376 [Xanthomonas sacchari NCPPB 4393]
Length = 188
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 68/165 (41%), Gaps = 19/165 (11%)
Query: 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKE----MRSTVLD 175
P LLIA L + F R+V LI + G G+++NR S ++ E M +D
Sbjct: 7 PLANQLLIALPALSDPN-FARSVALICQHDENGAMGVVVNRASEYTLGEVLEQMGIETID 65
Query: 176 AAGTFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
A T ++ + GGP+ E G + G D S F +GLY T V E
Sbjct: 66 A--TLREQVVLSGGPVHPERGFVIHDGAHGWD---SSLAF---ADGLYLTTSRDV---LE 114
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ R GP + GC GW QL E+ W A ++
Sbjct: 115 AMARGE-GPRNAVVALGCAGWGAGQLEYELGENSWLTAPADAELL 158
>gi|354596053|ref|ZP_09014070.1| UPF0301 protein yqgE [Brenneria sp. EniD312]
gi|353673988|gb|EHD20021.1| UPF0301 protein yqgE [Brenneria sp. EniD312]
Length = 187
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 59/150 (39%), Gaps = 18/150 (12%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS------DRPLFFGGP 190
+F R+V+ I G G+I+N+P E L A T D+P+F GGP
Sbjct: 18 VFRRSVVYICEHNEDGAMGLIVNKPMEQFTVENVLKKLKIAPTPRDPSIRLDKPVFAGGP 77
Query: 191 L--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFF 248
L + G L +P+ G G+ + M +T+G A + PE+
Sbjct: 78 LADDRGFILHTPRSGF--ASSIGISAETMITTSQDVLKTLGTAQQ--------PENTLVA 127
Query: 249 DGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G W++ QL E+ W ++
Sbjct: 128 LGYSAWDQGQLESELLDNAWLTTPADKEIL 157
>gi|302381926|ref|YP_003817749.1| hypothetical protein Bresu_0812 [Brevundimonas subvibrioides ATCC
15264]
gi|302192554|gb|ADL00126.1| protein of unknown function DUF179 [Brevundimonas subvibrioides
ATCC 15264]
Length = 189
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 68/163 (41%), Gaps = 19/163 (11%)
Query: 116 TIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLD 175
T EP G LL+A + G FE VIL+ + +P G+ ++RP+ + T LD
Sbjct: 2 TAFEPLTGRLLVAMPGI-GDPRFEHAVILVCAHDPDHAMGLRIDRPAPGVALKGVLTKLD 60
Query: 176 AAGTFSDR----PLFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYF-GTKETV 228
A DR P+ GGP+E G L + D+ V EGL T+E +
Sbjct: 61 VAA--PDRTAATPVLVGGPVERERGFVLHT-----DDWMVDDSSSPVSEGLALTATREAL 113
Query: 229 GCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271
+ + GP G GW + QL EE+ W A
Sbjct: 114 AAMTDPL----AGPRRAVLLLGYAGWGEGQLEEELAENVWLTA 152
>gi|407278514|ref|ZP_11106984.1| hypothetical protein RhP14_18528 [Rhodococcus sp. P14]
Length = 202
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 77/191 (40%), Gaps = 17/191 (8%)
Query: 106 QNSLGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMS 165
Q+ D+ A G LL++ L F RTV+ I+ +G G++LNR S +
Sbjct: 5 QDEPEDRTAPATPAVRPGTLLVSATDLVE-PTFRRTVVYIIEHGDVGSLGVVLNRTSDTA 63
Query: 166 IKEM--RSTVLDAAGTFSDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLY 221
++ + + T L AA + L+ GGP+ + L L + + G G GV +
Sbjct: 64 VQAVLPQWTELSAA----PKALYVGGPVRRDSALCLGTLRVGVSVEGVPGVRRIDGRVVM 119
Query: 222 FGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLE 281
+V E R F G GW QL+ E+ W V + P I L
Sbjct: 120 IDLDSDPAVIGPLV-------EGIRIFAGYAGWSAGQLDGELDNDDWMVISALPQDI-LG 171
Query: 282 SGTLGLWEELL 292
+ LW +L
Sbjct: 172 PPRVDLWARVL 182
>gi|218550195|ref|YP_002383986.1| hypothetical protein EFER_2887 [Escherichia fergusonii ATCC 35469]
gi|422804229|ref|ZP_16852661.1| yqgE [Escherichia fergusonii B253]
gi|226731699|sp|B7LPR5.1|YQGE_ESCF3 RecName: Full=UPF0301 protein YqgE
gi|218357736|emb|CAQ90380.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
gi|324115037|gb|EGC09002.1| yqgE [Escherichia fergusonii B253]
Length = 187
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 68/172 (39%), Gaps = 27/172 (15%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F R+V+ I P G G+I+N+P ++ ++ D A D+P+ GG
Sbjct: 18 LFRRSVVYICEHNPDGAMGLIINKPLENLQIEGILEKLKITPEPRDPAIRL-DKPVMLGG 76
Query: 190 PLEE--GLFLVSPK---GGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPED 244
PL E G L +P + + V + L ET+G + P D
Sbjct: 77 PLAEDRGFILHTPPSRFASSIRISDNTVVTTSRDVL-----ETIGTPKQ--------PAD 123
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G WEK QL +EI W A +++ ++ W + L+G
Sbjct: 124 VLVALGYASWEKGQLEQEILDNAWLTAPADLNIL-FKTPIADRWRDAAKLIG 174
>gi|398812432|ref|ZP_10571189.1| putative transcriptional regulator [Variovorax sp. CF313]
gi|398077949|gb|EJL68891.1| putative transcriptional regulator [Variovorax sp. CF313]
Length = 199
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 60/148 (40%), Gaps = 11/148 (7%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPL--EE 193
F R+V+ + G G+++N+PS +++K + + + A + P+F GGP+ E
Sbjct: 26 FNRSVVYLCEHSERGALGLVINKPSDINLKVLFEKIELHLARPELGEAPVFQGGPVQTER 85
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVME---GLYFGTKETVGCAAEMVKRNAVGPEDFRFFDG 250
G L P E + V+ M GL T + V A GP G
Sbjct: 86 GFVLHEPVFTQAEKPEESVYASTMTIPGGLEMTTSKDVLEAL----ATGAGPRKVLVSLG 141
Query: 251 CCGWEKEQLNEEIRAGYWTVAACSPSVI 278
W + QL E+ W P+VI
Sbjct: 142 YSAWGEGQLESELAENSWLTVGADPAVI 169
>gi|325677345|ref|ZP_08157010.1| hypothetical protein HMPREF0724_14793 [Rhodococcus equi ATCC 33707]
gi|325551808|gb|EGD21505.1| hypothetical protein HMPREF0724_14793 [Rhodococcus equi ATCC 33707]
Length = 201
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 13/172 (7%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSD 182
G LL+++ +L F RTV+ +L G G++LNRPS S++E+ A
Sbjct: 21 GTLLLSSTEL-FEPTFRRTVVYMLEHNDAGSLGVVLNRPSETSVQEVLPQWAPLAAAPQA 79
Query: 183 RPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV 240
+ GGP+ + L L + + G D G G+ G V A+ AV
Sbjct: 80 L--YIGGPVTRDAALCLATVRAGVDVSGVPGLRR------IDGRVVMVDLDADPEPIAAV 131
Query: 241 GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELL 292
+ R F G GW QL+ EI W V + S + + + +W ++L
Sbjct: 132 I-DGLRVFAGYAGWTIGQLDAEIDNDDWIVLSALASDV-ISPPRVDVWGQVL 181
>gi|329890621|ref|ZP_08268964.1| hypothetical protein BDIM_23250 [Brevundimonas diminuta ATCC 11568]
gi|328845922|gb|EGF95486.1| hypothetical protein BDIM_23250 [Brevundimonas diminuta ATCC 11568]
Length = 189
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 65/161 (40%), Gaps = 15/161 (9%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRP----SLMSIKEMRSTVLDAAG 178
G LL+A +D F VILI + + G+ L++P SL + E T +D A
Sbjct: 9 GRLLVAMPGIDDDR-FRHAVILICAHDDEHALGLRLDQPAPGVSLAEVLEKLDTPVDDAA 67
Query: 179 TFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYF-GTKETVGCAAEMVKR 237
DR + GGP+E V S F +GL GT++ + A+
Sbjct: 68 --RDRSVLIGGPVERERGFVLHTADWTSEDASLTFG---DGLALTGTRDALAAMADAED- 121
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GP G GW + QL EE+ W P++I
Sbjct: 122 ---GPSRAILLLGYAGWGEGQLEEELNENVWLTTDADPALI 159
>gi|262273736|ref|ZP_06051549.1| hypothetical protein VHA_000711 [Grimontia hollisae CIP 101886]
gi|262222151|gb|EEY73463.1| hypothetical protein VHA_000711 [Grimontia hollisae CIP 101886]
Length = 191
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 23/169 (13%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-----LDAAGTFS-DRPLFFGGPL 191
F+ +V+ + G G+++N+P +SI M + D S ++P+ FGGP+
Sbjct: 23 FQHSVVYMCEHNEDGAMGLVINQPINISIANMLEQIEVEREQDVTRPVSLNQPVLFGGPV 82
Query: 192 EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETV----GCAAEMVKRNAVGPEDFRF 247
E V K G Q+ E L T + + G E PE F
Sbjct: 83 SEDRGFVLHKN----TKLFGSSIQLSEELTVTTSKDILSILGTNEE--------PEQFIV 130
Query: 248 FDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G GW+ QL +E+ W P+VI ++ WE+ L +G
Sbjct: 131 ALGYAGWDAGQLEQELAENSWLTIEADPTVI-FDTPINERWEKALKQLG 178
>gi|397171844|ref|ZP_10495242.1| hypothetical protein AEST_30080 [Alishewanella aestuarii B11]
gi|396086562|gb|EJI84174.1| hypothetical protein AEST_30080 [Alishewanella aestuarii B11]
Length = 185
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFS 181
LIA LD +F+R+V + G GI++N P +S+ E+ + DA +
Sbjct: 8 FLIAMPSLDDP-MFKRSVTYLCEHNEEGAMGIVINHPMNVSLAELLEQLEISYDAKSPAA 66
Query: 182 DRPLFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+ GGP++ G L + K G Q+ GL T + + ++ A
Sbjct: 67 QAKVVAGGPVQHDRGFVLHTAKPGYHSS------LQLENGLMVTTSKDI--LQDLTTEQA 118
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE F G GW QL +EI W V +I
Sbjct: 119 --PEKFLLALGYAGWTAGQLEQEIADNSWLVIPADNRII 155
>gi|372268180|ref|ZP_09504228.1| ACR protein [Alteromonas sp. S89]
Length = 197
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 20/163 (12%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAAGTF 180
+G LL+A + F V I G G+++N PS ++ KE+ S + LD
Sbjct: 19 RGQLLLAMPGMQDPR-FVHAVAFICEHSADGTMGVVINAPSKVTWKEVFSQLALDDISLR 77
Query: 181 SDRPLFFGGPL--EEGLFLVSPKGGGDEVGKSG-VFEQVMEGLYFGTKETVGCAAEMVKR 237
D P+ GGP+ E+G L G G + + V E++ ++ + ++++
Sbjct: 78 GDEPVLVGGPVAQEQGFVL---HGRGMQFASTAEVSEEI----------SLTASKDIIES 124
Query: 238 NAVG--PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
A G P+D G GW QL +EI W S ++
Sbjct: 125 LAAGRGPDDVLLALGYAGWGPGQLEQEIAENAWLTLPASAEIL 167
>gi|254482750|ref|ZP_05095988.1| conserved hypothetical protein [marine gamma proteobacterium
HTCC2148]
gi|214037109|gb|EEB77778.1| conserved hypothetical protein [marine gamma proteobacterium
HTCC2148]
Length = 206
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAAGTFSDRPLFFGGP--LEE 193
IF ++ I G GI++N+P +S+ E+ + +++ FSD P+ GGP ++
Sbjct: 41 IFSHSITYICEHGESGAMGIVINQPLDLSVGEVFEHLEIESLNDFSDMPVMAGGPVQIDH 100
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
G L G DE ++ + QV + + T + A GP++ G G
Sbjct: 101 GFVL---HRGCDETWEANL--QVSDEITLTTSRDILRAI----AQGSGPKEHLIALGYAG 151
Query: 254 WEKEQLNEEIRAGYWTVAACSPSVI 278
W QL +E+ W + +I
Sbjct: 152 WSAGQLEQELAENSWLSLPATSDII 176
>gi|398992231|ref|ZP_10695253.1| putative transcriptional regulator [Pseudomonas sp. GM24]
gi|399013698|ref|ZP_10716001.1| putative transcriptional regulator [Pseudomonas sp. GM16]
gi|398112940|gb|EJM02792.1| putative transcriptional regulator [Pseudomonas sp. GM16]
gi|398133137|gb|EJM22369.1| putative transcriptional regulator [Pseudomonas sp. GM24]
Length = 190
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 53/135 (39%), Gaps = 13/135 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRP---SLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEG 194
F T+ I+ G GI++NRP +L I E +D P+F GGP++
Sbjct: 25 FAHTLTYIVEHTANGAMGIVVNRPQELNLADILEQLRPDIDPPALCQHVPIFIGGPVQTD 84
Query: 195 L-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
F++ P G + Q+ L T + V A + VGP G G
Sbjct: 85 RGFVLHPAGKTFQATA-----QLDGDLALSTSQDVLFAIA----DGVGPAKSLIALGYAG 135
Query: 254 WEKEQLNEEIRAGYW 268
WE QL E+ W
Sbjct: 136 WEAGQLEAELADNAW 150
>gi|423122084|ref|ZP_17109768.1| UPF0301 protein yqgE [Klebsiella oxytoca 10-5246]
gi|376392713|gb|EHT05375.1| UPF0301 protein yqgE [Klebsiella oxytoca 10-5246]
Length = 211
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 66/168 (39%), Gaps = 19/168 (11%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP----SLMSIKEMRSTVLDAAG--TFSDRPLFFGGP 190
IF R+V+ I G GII+N+P + I E + V + D+P+ GGP
Sbjct: 42 IFRRSVVYICEYNDDGAMGIIINKPLENLQIDGILEKLNIVAEPRNPEIRLDKPVMLGGP 101
Query: 191 LEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFF 248
L E G L SP D + + + ET+G + P +
Sbjct: 102 LAEDRGFILHSPP--SDFSSSIRISDNTVITTSRDVLETLGTDKQ--------PANVLVA 151
Query: 249 DGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G WEK QL +EI W A +++ ++ W E L+G
Sbjct: 152 LGYSSWEKGQLEQEILDNAWLTAPADQNIL-FKTPIADRWREAAKLIG 198
>gi|359782702|ref|ZP_09285922.1| hypothetical protein PPL19_16630 [Pseudomonas psychrotolerans L19]
gi|359369522|gb|EHK70093.1| hypothetical protein PPL19_16630 [Pseudomonas psychrotolerans L19]
Length = 189
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 17/159 (10%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVL-DAAGTFSDR 183
LLIA ++D + F TVI ++ P G G+++NRP+ + + ++ + D T D
Sbjct: 13 LLIAMPQMDDPN-FAETVIYLVDHGPDGAMGLVINRPNGLHLDDLLEQLRPDIPATPEDT 71
Query: 184 P--LFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQV--MEGLYFGTKETVGCAAEMVKRNA 239
L+ GGP++ V G VF+ +E L T V A +
Sbjct: 72 RVVLYAGGPVQTDRGFVLHDAG-------PVFQNTLELEELSLTTSPDVLFALS----DG 120
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GP G GW QL EE+ A W + +++
Sbjct: 121 TGPSRHLITLGYSGWGPGQLEEELAANLWLTTPATSALL 159
>gi|149376906|ref|ZP_01894661.1| putative transcriptional regulator [Marinobacter algicola DG893]
gi|149358798|gb|EDM47267.1| putative transcriptional regulator [Marinobacter algicola DG893]
Length = 188
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 55/143 (38%), Gaps = 13/143 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPL--EEGL 195
F VI + G G+ +N P + + E+ LD G D P++ GGP+ E G
Sbjct: 27 FHGAVIYLCEHSDEGALGLTVNHPLDIHLGEILEQ-LDMDGGELDVPVYGGGPVQPERGF 85
Query: 196 FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWE 255
L SP G QV + + T V + GP + G GW
Sbjct: 86 VLHSPDAGWQNTA------QVADDILLTTSRDVLSDIGAGR----GPRSYLVCLGYAGWS 135
Query: 256 KEQLNEEIRAGYWTVAACSPSVI 278
+ QL EE+ + W + V+
Sbjct: 136 EGQLEEELSSNAWLTCPATADVL 158
>gi|387816050|ref|YP_005431545.1| hypothetical protein MARHY3668 [Marinobacter hydrocarbonoclasticus
ATCC 49840]
gi|381341075|emb|CCG97122.1| conserved hypothetical protein [Marinobacter hydrocarbonoclasticus
ATCC 49840]
Length = 167
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 13/143 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFFGGPL--EEGL 195
F VI + G G+++N+P + + E+ LD G D P++ GGP+ E G
Sbjct: 6 FHGGVIYLCEHSEEGALGLMINQPLDIHLGEILEQ-LDMHGGELDLPVYTGGPVQPERGF 64
Query: 196 FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWE 255
L SP G + V ++V+ E++G GPE F G GW
Sbjct: 65 VLHSP--GRQWQNTARVTDEVLLTTSRDILESIG--------RDEGPESFLVALGYSGWG 114
Query: 256 KEQLNEEIRAGYWTVAACSPSVI 278
+ QL EE+ + W S ++
Sbjct: 115 EGQLEEELGSNAWLTCPASTDIL 137
>gi|392544493|ref|ZP_10291630.1| hypothetical protein PpisJ2_22098 [Pseudoalteromonas piscicida JCM
20779]
Length = 185
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 73/177 (41%), Gaps = 17/177 (9%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFS 181
L+A +D F TV + G G+++N P +++ E+ + D + +
Sbjct: 8 FLVAMPSMDDP-FFNHTVTYLCEHSEDGAMGLVVNHPIDITVGELLDQIDIDNDKSSQAA 66
Query: 182 DRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
++ GGP+ + G L +PK G + E E + +K+ + ++
Sbjct: 67 KVNIYAGGPVHTDRGFVLHTPK-----FGYASSQELSSEIMITTSKDVLASLT-----SS 116
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
PE F G GW QL +E++ W V P +I + WE+ + ++G
Sbjct: 117 HSPEGFIITLGYAGWVSGQLEKELKENTWLVVEADPEII-FNTPPEKRWEKAVQMLG 172
>gi|320540153|ref|ZP_08039808.1| putative conserved hypothetical protein [Serratia symbiotica str.
Tucson]
gi|320029819|gb|EFW11843.1| putative conserved hypothetical protein [Serratia symbiotica str.
Tucson]
Length = 206
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 64/155 (41%), Gaps = 25/155 (16%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRP--------SLMSIKEMRSTVLDA 176
LIA L F R+VI I G G+++N+P L +K M T A
Sbjct: 26 FLIAMPSLQA-SCFTRSVIYICEHNEEGAMGLVINKPLEQCTVAMVLNKLKIMPQTRDPA 84
Query: 177 AGTFSDRPLFFGGPLEE--GLFLVSP-KGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
++P+F GGPL + G L +P +G G + S EQ M ET+G +
Sbjct: 85 INL--EKPVFAGGPLADDCGFILHTPCQGFGYSMAIS---EQTMITTSKDVLETLGTPEQ 139
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYW 268
P++ G GWE QL +E+ W
Sbjct: 140 --------PDNVLVALGYAGWEPGQLEQEVLENVW 166
>gi|15835101|ref|NP_296860.1| hypothetical protein TC0483 [Chlamydia muridarum Nigg]
gi|270285271|ref|ZP_06194665.1| hypothetical protein CmurN_02453 [Chlamydia muridarum Nigg]
gi|270289287|ref|ZP_06195589.1| hypothetical protein CmurW_02518 [Chlamydia muridarum Weiss]
gi|301336667|ref|ZP_07224869.1| hypothetical protein CmurM_02505 [Chlamydia muridarum MopnTet14]
gi|46577567|sp|Q9PKI2.1|Y483_CHLMU RecName: Full=UPF0301 protein TC_0483
gi|7190524|gb|AAF39329.1| transcriptional regulator, putative [Chlamydia muridarum Nigg]
Length = 190
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 13/179 (7%)
Query: 121 EKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF 180
EKG LLIA+ ++G +F R+VIL+ P G G+ILN+ M E V
Sbjct: 10 EKGSLLIASPDVNG-GVFSRSVILVCEHSPNGSFGLILNKTLEMDSPE---EVFPLDHFD 65
Query: 181 SDRPLF-FGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
R F GGPL+ ++ + ++ ++ G + E +K N
Sbjct: 66 ESRVRFCMGGPLQANQIMLLHS---SSSEDANSSIEICPSVFLGGDFSFIQEGE-IKSND 121
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRR 298
E F G GW+ QL +E G W +A S ++ + LW ++L +G R
Sbjct: 122 ---EKMLFCFGYSGWQAGQLEKEFLEGLWFLAPASQEIV-FTARPDKLWSDVLQNLGGR 176
>gi|398995143|ref|ZP_10698032.1| putative transcriptional regulator [Pseudomonas sp. GM21]
gi|398130710|gb|EJM20044.1| putative transcriptional regulator [Pseudomonas sp. GM21]
Length = 190
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 15/136 (11%)
Query: 138 FERTVILILSMEPMGPSGIILNRP---SLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEG 194
F T+ I+ G G+++NRP SL I E ++ P+F GGP++
Sbjct: 25 FAHTLTYIVEHTANGAMGLVINRPQDLSLADILEQLRPDIEPPALCQHVPIFMGGPVQTD 84
Query: 195 L-FLVSPKGGGDEVGKSGVFEQVMEG-LYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCC 252
F++ P G + +EG L T + V A + VGP G
Sbjct: 85 RGFVLHPTGQTYQATAD------LEGELSLSTSQDVLFAIA----DGVGPAKSLIALGYA 134
Query: 253 GWEKEQLNEEIRAGYW 268
GWE QL+ E+ W
Sbjct: 135 GWEAGQLDAELAQNAW 150
>gi|389871258|ref|YP_006378677.1| hypothetical protein TKWG_06190 [Advenella kashmirensis WT001]
gi|388536507|gb|AFK61695.1| hypothetical protein TKWG_06190 [Advenella kashmirensis WT001]
Length = 193
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 62/152 (40%), Gaps = 28/152 (18%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT-FSDRPLFFGGPLE--E 193
IFE V+ + G G++LNRP+ +S++++ + + + +F+GGP++
Sbjct: 30 IFEGGVVYVCEHSEDGALGLLLNRPTDLSVEQLLERLELEVNADLAAQTVFYGGPVQTDR 89
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV-------GPEDFR 246
G L P G ++ + +G A R+ + GP+
Sbjct: 90 GFVLHHPAG------------------HYRSSVVLGDMALTTSRDVLEDLARGEGPQQIF 131
Query: 247 FFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW QL +EI A W + ++I
Sbjct: 132 ITLGYAGWSAGQLEQEIAANTWLNVSADRNII 163
>gi|424817485|ref|ZP_18242636.1| hypothetical protein ECD227_2602 [Escherichia fergusonii ECD227]
gi|325498505|gb|EGC96364.1| hypothetical protein ECD227_2602 [Escherichia fergusonii ECD227]
Length = 187
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 26/154 (16%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F R+V+ I P G G+I+N+P ++ ++ D A D+P+ GG
Sbjct: 18 LFRRSVVYICEHNPDGAMGLIINKPLENLQIEGILEKLKITPEPRDPAIRL-DKPVMLGG 76
Query: 190 PLEE--GLFLVSPK---GGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPED 244
PL E G L +P + + V + L ET+G + P D
Sbjct: 77 PLAEDRGFILHTPPSRFASSIRISDNTVVTTSRDVL-----ETIGTPKQ--------PAD 123
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G WEK QL +EI W A +++
Sbjct: 124 VLVALGYASWEKGQLEQEILDNAWLTAPADLNIL 157
>gi|194364718|ref|YP_002027328.1| hypothetical protein Smal_0940 [Stenotrophomonas maltophilia
R551-3]
gi|226696036|sp|B4SMG8.1|Y940_STRM5 RecName: Full=UPF0301 protein Smal_0940
gi|194347522|gb|ACF50645.1| protein of unknown function DUF179 [Stenotrophomonas maltophilia
R551-3]
Length = 188
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 14/135 (10%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPL--EE 193
F R+V LI + G G+++N+PS ++ E+ + + G R + GGP+ E
Sbjct: 24 FARSVALICQHDENGAMGVLVNQPSEYTLGEVLAQMDITTGDGDLQARMVLNGGPVHPER 83
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
G + D G EGLY T + E + R GP + GC G
Sbjct: 84 GFVIHDDARAWDSSLIVG------EGLYLTTSRDI---LEAMARGE-GPANAVVTLGCAG 133
Query: 254 WEKEQLNEEIRAGYW 268
W QL E+ W
Sbjct: 134 WGAGQLESELSENSW 148
>gi|375266699|ref|YP_005024142.1| hypothetical protein VEJY3_13435 [Vibrio sp. EJY3]
gi|369842019|gb|AEX23163.1| hypothetical protein VEJY3_13435 [Vibrio sp. EJY3]
Length = 187
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 32/156 (20%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---------LDAAGTFSDRPLFFG 188
F+ +VI + G G+I+N P +++ M V +A+ DRP++ G
Sbjct: 19 FQNSVIYVCEHNEEGAMGLIINAPVDITVGNMLKQVKVQPVHPRLFEAS---LDRPVYNG 75
Query: 189 GPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETV----GCAAEMVKRNAVGP 242
GP+ E G L PK + +S + Q+ + L T + G AE P
Sbjct: 76 GPISEDRGFILHKPK----DYYESSI--QMTDELAVTTSRDILTVLGTEAE--------P 121
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
D+ G GW QL E+ W +P +I
Sbjct: 122 SDYLVALGYAGWSAGQLENELVENSWLTIEATPEII 157
>gi|366159933|ref|ZP_09459795.1| hypothetical protein ETW09_13405 [Escherichia sp. TW09308]
Length = 187
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 67/169 (39%), Gaps = 21/169 (12%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
IF R+V+ I P G GII+N+P ++ ++ D + D+P+ GG
Sbjct: 18 IFRRSVVYICEHNPEGAMGIIINKPLENLKIEGILEKLKITPEPRDESIRL-DKPVMLGG 76
Query: 190 PLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRF 247
PL E G L +P + + + + ET+G + P D
Sbjct: 77 PLAEDRGFILHTPP--SNFTSSIRISDNTVMTTSRDVLETLGTDKQ--------PSDVMV 126
Query: 248 FDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G W+K QL +EI W A +++ ++ W + L+G
Sbjct: 127 ALGYSSWDKGQLEQEILDNAWLTAPADLNIL-FKTPIADRWRDAARLIG 174
>gi|259415114|ref|ZP_05739036.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
gi|259349024|gb|EEW60778.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
Length = 219
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 74/183 (40%), Gaps = 15/183 (8%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR--PSLMSIKEMRSTVLD 175
H G LLIA + G F+ +V+ + S G G+I+N+ P + M +D
Sbjct: 35 HMELTGKLLIAMPGI-GDPRFDNSVVFLCSHGDEGAMGLIINKLAPGVALQTLMDQLEID 93
Query: 176 AAGTFSDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
+ P++FGGP+E G L S DE + V G F T+ +
Sbjct: 94 IEPAIASAPVYFGGPVETQRGFVLHS-----DEYISTVNSLPVKPG--FSMTATLDVLED 146
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLW 293
+ + GPE + G GW QL +EI W P +I ++ WE L
Sbjct: 147 IAEGR--GPERYLVMLGYAGWGPGQLEDEIAQNGWLTTDAEPEMIFTDTADTK-WEAALA 203
Query: 294 LMG 296
+G
Sbjct: 204 SLG 206
>gi|410637882|ref|ZP_11348452.1| hypothetical protein GLIP_3036 [Glaciecola lipolytica E3]
gi|410142568|dbj|GAC15657.1| hypothetical protein GLIP_3036 [Glaciecola lipolytica E3]
Length = 185
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 16/159 (10%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF---S 181
LL+A LD + F R++ I G G+++N+P MS++E+ S A +
Sbjct: 8 LLVAMPSLDDPY-FARSLTYICEHNEKGAMGLVINQPIGMSLQELISQADKDAIVLKEKA 66
Query: 182 DRPLFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
D + GGP+ + G L + + G S + E + +K+ + N
Sbjct: 67 DDIVLAGGPVSQDRGFILHTTQSGW-----SSSLQLTSEIMITTSKDILSALG-----NE 116
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE G GW QL EE++ W + +++
Sbjct: 117 NAPEKALVTLGYAGWTAGQLEEEVQNNAWLIVEADEALL 155
>gi|294675960|ref|YP_003576575.1| hypothetical protein RCAP_rcc00403 [Rhodobacter capsulatus SB 1003]
gi|294474780|gb|ADE84168.1| protein of unknown function DUF179 [Rhodobacter capsulatus SB 1003]
Length = 183
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 71/189 (37%), Gaps = 36/189 (19%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG--- 178
G LLIA + G FE +V+ + S G GII+N+P K +LD G
Sbjct: 4 SGKLLIAMPGM-GDPRFEHSVVAMCSHSAEGAMGIIVNKPL---PKPPMGDLLDQLGIAV 59
Query: 179 TFSDR---PLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMV 235
T SDR PLFFGGP+E G V + +F VG M
Sbjct: 60 TASDRGAAPLFFGGPVETGRGFV-----------------LHSADWFAATMPVGEGLAMT 102
Query: 236 KRNAV--------GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGL 287
+ GP G GW Q+ +EI W VA + ++ L+
Sbjct: 103 ATRDILEEIAAGRGPSRAILALGYAGWGPGQIEQEILDNGWLVAEGNAALT-LDGDHATK 161
Query: 288 WEELLWLMG 296
W L MG
Sbjct: 162 WTRALGTMG 170
>gi|399928266|ref|ZP_10785624.1| hypothetical protein MinjM_14707 [Myroides injenensis M09-0166]
Length = 190
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 23/154 (14%)
Query: 121 EKGCLLIAT-----EKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLD 175
EKG +L++ E+L+ F R+V+LI G G I+N+ +++ ++ +
Sbjct: 9 EKGDILLSLPTASFEELE----FSRSVVLIADQHSEGTVGFIINKALDITLNQLMPNITT 64
Query: 176 AAGTFSDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
+ ++ GGP+E + LF + D V S + LY+G +
Sbjct: 65 SLTIYN------GGPVENDKLFCI--HSCPDLVMNS---HHIYNDLYWGGD--FDQILTL 111
Query: 235 VKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYW 268
+ + + ++ +FF G GW+ QLN E+ +W
Sbjct: 112 LNQGILNKDNTKFFLGYTGWDYGQLNIELSKHFW 145
>gi|377577180|ref|ZP_09806163.1| hypothetical protein YqgE [Escherichia hermannii NBRC 105704]
gi|377541708|dbj|GAB51328.1| hypothetical protein YqgE [Escherichia hermannii NBRC 105704]
Length = 187
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 67/174 (38%), Gaps = 31/174 (17%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-----------SLMSIKEMRSTVLDAAGTFSDRPL 185
+F R V+ I G G+I+N+P L E R L D+P+
Sbjct: 18 LFRRAVVYICEYNEDGAMGLIINKPLENLKVDGVLQKLKITPEPRDPALRL-----DKPV 72
Query: 186 FFGGPLEE--GLFLVSPKGGGDEVGKS-GVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
F GGPL E G L +P D+ S + + + ET+G A++ P
Sbjct: 73 FVGGPLAEDRGFILHTPP---DKFNSSIRISDNTIITTSRDVLETLGTASQ--------P 121
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
E+ G WEK QL EI W A +++ + W E L+G
Sbjct: 122 EEVIVALGYSSWEKGQLESEILENSWLTAPADMNIL-FRTPIAERWREAAKLIG 174
>gi|375108929|ref|ZP_09755183.1| hypothetical protein AJE_03176 [Alishewanella jeotgali KCTC 22429]
gi|393761440|ref|ZP_10350077.1| hypothetical protein AGRI_00595 [Alishewanella agri BL06]
gi|374571115|gb|EHR42244.1| hypothetical protein AJE_03176 [Alishewanella jeotgali KCTC 22429]
gi|392607450|gb|EIW90324.1| hypothetical protein AGRI_00595 [Alishewanella agri BL06]
Length = 185
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFS 181
LIA LD +F+R+V + G GI++N P +S+ E+ + DA +
Sbjct: 8 FLIAMPSLDDP-MFKRSVTYLCEHNEEGAMGIVVNHPMNVSLAELLEQLEISYDAKSPAA 66
Query: 182 DRPLFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+ GGP++ G L + K G Q+ GL T + + ++ A
Sbjct: 67 QAKVVAGGPVQHDRGFVLHTAKPGYHSS------LQLENGLMVTTSKDI--LQDLTTEQA 118
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE F G GW QL +EI W V +I
Sbjct: 119 --PEKFLLALGYAGWTAGQLEQEIADNSWLVIPADNRII 155
>gi|409203614|ref|ZP_11231817.1| hypothetical protein PflaJ_19916 [Pseudoalteromonas flavipulchra
JG1]
Length = 185
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 73/177 (41%), Gaps = 17/177 (9%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFS 181
L+A +D F TV + G G+++N P +++ E+ + D + +
Sbjct: 8 FLVAMPSMDDP-FFNHTVTYLCEHSEDGAMGLVVNHPIDITVGELLDQIDIDNDKSSQAA 66
Query: 182 DRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
++ GGP+ + G L +PK G + E E + +K+ + ++
Sbjct: 67 KVNIYAGGPVHTDRGFVLHTPK-----FGYASSQELSSEIMITTSKDVLASLT-----SS 116
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
PE F G GW QL +E++ W V P +I + WE+ + ++G
Sbjct: 117 HSPEGFIITLGYAGWVSGQLEKELKENTWLVVEADPEII-FNTPPEKRWEKAVQMLG 172
>gi|429218269|ref|YP_007179913.1| transcriptional regulator [Deinococcus peraridilitoris DSM 19664]
gi|429129132|gb|AFZ66147.1| putative transcriptional regulator [Deinococcus peraridilitoris DSM
19664]
Length = 174
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 64/155 (41%), Gaps = 22/155 (14%)
Query: 126 LIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPL 185
L+A+ + G +FER V+L+L G G+I+N + M I E+ L A +D
Sbjct: 8 LVASPHMVGT-MFERAVVLLLEHSANGAMGLIVNLQTEMPIGEL----LAIAEGRTDHA- 61
Query: 186 FFGGPLEEGL---FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
F GGP+E + +P G E+ + V GL E+++
Sbjct: 62 FLGGPVEPQVGWCLYETPTGKPGELRLAATL-HVTSGL------------EVLQEVLEQG 108
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSV 277
+F G GW QL E RAG W P +
Sbjct: 109 GEFMLLLGYAGWSAGQLELETRAGSWVFLEAGPEL 143
>gi|300780176|ref|ZP_07090032.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
gi|300534286|gb|EFK55345.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
Length = 202
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 67/166 (40%), Gaps = 24/166 (14%)
Query: 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG 178
EP G LL+A + F R+++L++ G +LNR S +++ + L
Sbjct: 18 EPGPGMLLVAAPGMLSDE-FVRSIVLVIEHTATHSFGAVLNRRSDVAVHNVLPEWLPEVA 76
Query: 179 TFSDRPLFFGGPLEEGLFLVSPKGG-GDEVGKSGV-------FEQVMEGLYFGTKETVGC 230
+ + L+ GGP V P+ G V KSG F ++ L T
Sbjct: 77 --NPQALYIGGP-------VGPQAAIGVGVTKSGTVIDDHPEFTRLANRLVHVDLRTEPE 127
Query: 231 AAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPS 276
E + E R F G WE QL+EEI G W VA PS
Sbjct: 128 TVEGLL------EGMRLFAGYAEWEPGQLDEEIERGDWYVAPALPS 167
>gi|395763918|ref|ZP_10444587.1| hypothetical protein JPAM2_19491 [Janthinobacterium lividum PAMC
25724]
Length = 200
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFS---DRPLFFGGPL 191
IF TV+ + G G+++N+P+ M+++ + R + AAG+ + P+ FGGP+
Sbjct: 32 IFGGTVVYVCEHNENGVLGVVINKPTDMTMEVLFDRIDLTLAAGSDTPSIKEPIMFGGPV 91
Query: 192 EE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFD 249
++ G L +P G S V + + F T V E V + GP+
Sbjct: 92 QDDRGFVLHTP---GAHYSSS---LTVTDEIAFTTSMDV---LEAVAKGD-GPQRMLVSI 141
Query: 250 GCCGWEKEQLNEEI-RAGYWTVAACS 274
G GW QL EEI R G+ TV A +
Sbjct: 142 GYSGWSPGQLEEEIGRNGWLTVGASA 167
>gi|409418356|ref|ZP_11258352.1| hypothetical protein PsHYS_04259 [Pseudomonas sp. HYS]
Length = 189
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 60/148 (40%), Gaps = 20/148 (13%)
Query: 138 FERTVILILSMEPMGPSGIILNRP---SLMSIKEMRSTVLDAAGTFSDRPLFFGGPLE-- 192
F +T+ I+ G G+++NRP +L I E +D + + P++ GGP++
Sbjct: 25 FAQTLTYIVEHNANGAMGLVVNRPQDLNLADILEQLRPEVDPPASCTHVPIYMGGPVQTD 84
Query: 193 EGLFLVSPKGGGDEVGKSGVFEQVME--GLYFGTKETVGCAAEMVKRNAVGPEDFRFFDG 250
G L S F+ +E GL T + V A + +GP+ G
Sbjct: 85 RGFVLHS---------SERTFQATVELDGLSLTTSQDVLFAIA----DGLGPKRSLIALG 131
Query: 251 CCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GWE QL E+ W P +I
Sbjct: 132 YAGWEAGQLEAELADNAWLNCPFDPEII 159
>gi|319408225|emb|CBI81878.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 194
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 22/185 (11%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNR------PSLM----SIKEMRS 171
G LLIA + F R+VI + + G GI+LN+ P L+ I++ +
Sbjct: 9 NGKLLIAMPGMSDKR-FVRSVIYVCAHSNSGAMGIVLNQLHSIDFPELLLQLGVIEQAKK 67
Query: 172 TVLDAAGTFSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCA 231
+ L + P+ +GGP++ V G V +++ + + C
Sbjct: 68 SYLSE--SIKKFPVRYGGPVDPSRGFVLHSGDYTCEATISVTDKIYLTATIDILKAISCE 125
Query: 232 AEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEEL 291
GP+ G GW+ QL EI A W +++ SPS I ES ++E
Sbjct: 126 Q--------GPQHALVALGYAGWKAGQLETEISANGWLISSASPSFI-FESDLSNTYDES 176
Query: 292 LWLMG 296
MG
Sbjct: 177 FTRMG 181
>gi|429111532|ref|ZP_19173302.1| UPF0301 protein YqgE [Cronobacter malonaticus 507]
gi|426312689|emb|CCJ99415.1| UPF0301 protein YqgE [Cronobacter malonaticus 507]
Length = 189
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 68/170 (40%), Gaps = 23/170 (13%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F R+V+ I G G+I+N+P ++ ++ D A D+P+F GG
Sbjct: 20 LFRRSVVYICEYNNEGAMGLIINKPLENLQVEGVLQKLKITPEPRDPAIRL-DKPVFLGG 78
Query: 190 PLEE--GLFLVS-PKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFR 246
PL E G L + P + S + + ET+G A + P+D
Sbjct: 79 PLAEDRGFILHTLPDAFSSSIRIS---DNTVITTSRDVLETLGTAEQ--------PDDVL 127
Query: 247 FFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G WEK QL EEI W A +++ + W E L+G
Sbjct: 128 VALGYSSWEKGQLEEEILENAWLTAPADLNIL-FHTPIADRWREAAKLIG 176
>gi|387769131|ref|ZP_10125397.1| hypothetical protein HMPREF1052_1086 [Pasteurella bettyae CCUG
2042]
gi|386907087|gb|EIJ71802.1| hypothetical protein HMPREF1052_1086 [Pasteurella bettyae CCUG
2042]
Length = 185
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 65/159 (40%), Gaps = 15/159 (9%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAG-TFS 181
LIA L + F +VI I G G+++N+P+ +S+ E+ + + A G +
Sbjct: 7 FLIAMPNLQDSY-FAYSVIYICEHNDQGTMGLVVNQPTDLSVAELVAKLNFMMADGRQYP 65
Query: 182 DRPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
D + GGP +E G L + E +V + L T E V +K
Sbjct: 66 DMFVLAGGPVNIERGFILHTTTEQDFEHSY-----KVTDNLQLTTSEDVITTFGTLK--- 117
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
P + GC W+ QL EEI W V + V+
Sbjct: 118 -APTKYLVALGCASWKPGQLEEEISENAWLVVPANERVL 155
>gi|407786767|ref|ZP_11133911.1| hypothetical protein B30_12007 [Celeribacter baekdonensis B30]
gi|407200718|gb|EKE70723.1| hypothetical protein B30_12007 [Celeribacter baekdonensis B30]
Length = 182
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSL-MSIKEMRSTV-LDAAGTF 180
G LLIA + G FE V+ + + G G+I+N+ S +++ ++ + + A
Sbjct: 3 GKLLIAMPGI-GDPRFENAVVFLCAHSSDGAMGLIINKTSTEIAVSDVFEQLDIRATPEM 61
Query: 181 SDRPLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
P++FGGP+E G L S D ++ G + ++ + E+++
Sbjct: 62 QPIPVYFGGPVELGRGFVLHSTDYAADHAS-----------MHVGEQFSMTASREILRDM 110
Query: 239 A--VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
A GP++ G GW QL EEI W +P ++
Sbjct: 111 ARGAGPDERLLCLGYAGWGPGQLEEEIVKNGWLACDANPEIV 152
>gi|190573125|ref|YP_001970970.1| hypothetical protein Smlt1098 [Stenotrophomonas maltophilia K279a]
gi|424667395|ref|ZP_18104420.1| UPF0301 protein [Stenotrophomonas maltophilia Ab55555]
gi|226696207|sp|B2FRV1.1|Y1098_STRMK RecName: Full=UPF0301 protein Smlt1098
gi|190011047|emb|CAQ44656.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
gi|291419522|gb|ADE05278.1| putative ABC transporter [uncultured bacterium]
gi|401069009|gb|EJP77532.1| UPF0301 protein [Stenotrophomonas maltophilia Ab55555]
gi|456735378|gb|EMF60129.1| protein YqgE [Stenotrophomonas maltophilia EPM1]
Length = 188
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 14/135 (10%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPL--EE 193
F R+V LI + G G+++N+PS ++ E+ + + G R + GGP+ E
Sbjct: 24 FARSVALICQHDENGAMGVLVNQPSEYTLGEVLAQMDITTGDGDLQARMVLNGGPVHPER 83
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
G + D G +GLY T + E + R GP + GC G
Sbjct: 84 GFVIHDDARAWDSSLTVG------DGLYLTTSRDI---LEAMARGE-GPANAVVTLGCAG 133
Query: 254 WEKEQLNEEIRAGYW 268
W QL E+ W
Sbjct: 134 WGAGQLESELSENSW 148
>gi|399908184|ref|ZP_10776736.1| transcriptional regulator [Halomonas sp. KM-1]
Length = 190
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 69/159 (43%), Gaps = 10/159 (6%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAAGT- 179
+G L+A L+ + F ++ + + G G+I+NRP +++ + + LD +
Sbjct: 10 RGHFLLAMPHLEDPN-FAGSLSYLCDHDENGTMGVIVNRPLEITLDALFEQLELDGEESP 68
Query: 180 FSDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+ P+++GGP + + +G S QV + + T + A +
Sbjct: 69 HRNAPVYYGGPTHKDRGFILHRGSSTPWDSS---IQVEDDIALTTSMDILLALAAGR--- 122
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GPE+F GC GWE QL +E++ W ++
Sbjct: 123 -GPEEFLVCLGCAGWEAGQLEQELKDNAWLTVEAEGDIL 160
>gi|398849792|ref|ZP_10606519.1| putative transcriptional regulator [Pseudomonas sp. GM80]
gi|398250394|gb|EJN35719.1| putative transcriptional regulator [Pseudomonas sp. GM80]
Length = 190
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 53/135 (39%), Gaps = 13/135 (9%)
Query: 138 FERTVILILSMEPMGPSGIILNRP---SLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEG 194
F T+ I+ G GI++NRP +L I E +D P+F GGP++
Sbjct: 25 FAHTLTYIVEHTANGAMGIVVNRPQELNLADILEQLRPDIDPPALCQHVPIFIGGPVQTD 84
Query: 195 L-FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
F++ P G + Q+ L T + V A + VGP G G
Sbjct: 85 RGFVLHPAGKTFQATA-----QLDGDLALSTSQDVLFAIA----DGVGPAKSLIALGYAG 135
Query: 254 WEKEQLNEEIRAGYW 268
WE QL E+ W
Sbjct: 136 WEAGQLEAEMADNAW 150
>gi|330446903|ref|ZP_08310554.1| UPF0301 protein SO_3346 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491094|dbj|GAA05051.1| UPF0301 protein SO_3346 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 187
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 22/151 (14%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAAGTFSD-----RPLFFGGPL 191
F+++VI + G GII+N P +SI M + +D +D P+ GGP+
Sbjct: 19 FKQSVIYLCEHNDEGAMGIIINHPIDISIANMLEQIEVDRTLPIADPVSLESPVLNGGPV 78
Query: 192 EE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR--NAVGPEDFRF 247
E G L + KG Q L ++ V + +++ + PE F
Sbjct: 79 SEDRGFVLHTTKG------------QYSSSLPVNSELAVTTSLDILSELGTTLAPEQFIV 126
Query: 248 FDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
G GW+ QL +E+ W ++I
Sbjct: 127 ALGYAGWDAGQLEQELVDNNWLTIEADDNII 157
>gi|323456136|gb|EGB12003.1| hypothetical protein AURANDRAFT_61295 [Aureococcus anophagefferens]
Length = 754
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 219 GLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSV- 277
G+Y G AA+ V+ + P DFRFF G W +L +IR G + AACS V
Sbjct: 661 GIYKGGSAE---AAQRVQDESNDPYDFRFFIGKHEWAPGELERDIREGLYRPAACSRGVA 717
Query: 278 ----IGLESGTLGLWEELLWLMG 296
+GL LW E++ ++G
Sbjct: 718 LKQCLGLPK---PLWHEVMEMLG 737
>gi|320333566|ref|YP_004170277.1| hypothetical protein [Deinococcus maricopensis DSM 21211]
gi|319754855|gb|ADV66612.1| UPF0301 protein yqgE [Deinococcus maricopensis DSM 21211]
Length = 173
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 26/149 (17%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRP 184
L+A+ L+G +FER+VIL+L + G G+++N P+ ++I E+ L A +R
Sbjct: 6 FLVASPHLNG-GMFERSVILLLEHDHTGAMGLVINAPTELAIGEL----LPLAQGRQERA 60
Query: 185 LFFGGPLEEGL---FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
+ GGP+E + P G E+ ++ LY + V + V
Sbjct: 61 -WVGGPVEPQVGWCIYEKPTGRAGEM-------RLGPNLYATSSLDV--------LDGVL 104
Query: 242 PEDFRF--FDGCCGWEKEQLNEEIRAGYW 268
+D RF G GW+ QL+ E+R G W
Sbjct: 105 CDDCRFMLLLGYAGWQPGQLDAELRNGTW 133
>gi|398835986|ref|ZP_10593336.1| putative transcriptional regulator [Herbaspirillum sp. YR522]
gi|398214308|gb|EJN00890.1| putative transcriptional regulator [Herbaspirillum sp. YR522]
Length = 253
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 60/154 (38%), Gaps = 22/154 (14%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIK----------EMRSTVLDAAGTFSDRPLF 186
IF TV+ + G G+++N+ + M++ E+R +A RP+
Sbjct: 80 IFGGTVVYLCEHNHNGALGVVINKATDMTMDVLLERINLTLEIRPDTPEAMPGVYRRPVM 139
Query: 187 FGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPED 244
FGGP+ E G L S S + E +K+ + A+ GPE
Sbjct: 140 FGGPVQVERGFVLHSTANS-----FSSTLQVTDEIALTTSKDVLEAVAQ-----GDGPER 189
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GC GW QL +E+ W P++I
Sbjct: 190 VLVTLGCSGWSPGQLEQELGRNGWLTVKADPAII 223
>gi|146312991|ref|YP_001178065.1| hypothetical protein Ent638_3352 [Enterobacter sp. 638]
gi|145319867|gb|ABP62014.1| protein of unknown function DUF179 [Enterobacter sp. 638]
Length = 212
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 20/168 (11%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP----SLMSIKE-MRSTVLDAAGTFS-DRPLFFGGP 190
IF R+V+ I G GII+N+P + I E ++ T + A D+P+ GGP
Sbjct: 44 IFRRSVVYICEYSEDGAMGIIINKPLENLQIEGILEKLKITSEERAPEIRLDKPVMLGGP 103
Query: 191 LEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFF 248
L E G L +P G + V + + ET+G + P +
Sbjct: 104 LAEDRGFILHTPPGFSSSI---RVSDNTVITTSRDVLETLGTHNQ--------PSEVLVA 152
Query: 249 DGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G WEK QL +EI W A +++ ++ W + L+G
Sbjct: 153 LGYSSWEKGQLEQEILDNAWLTAPADLNIL-FKTPIADRWRDAAKLIG 199
>gi|160872047|ref|ZP_02062179.1| conserved hypothetical protein [Rickettsiella grylli]
gi|159120846|gb|EDP46184.1| conserved hypothetical protein [Rickettsiella grylli]
Length = 195
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 31/157 (19%)
Query: 138 FERTVILILSMEPMGPSGIILNRP------SLMSIKE------MRSTVLDAAGTFSDRPL 185
F R+V+ I G GI++N+P +L I + ++ST A F P+
Sbjct: 24 FSRSVVYICEHTEKGAVGIVINQPLQSLHVNLAEIVQEITESNLKSTKTTAGANF---PI 80
Query: 186 FFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA--VG 241
GGP+ E G + +P G L ++ +V + +++ A G
Sbjct: 81 LCGGPIHPERGFVIHAPSGAWQS------------SLKMNSEISVTTSKDILLAIAKQQG 128
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
PE F F G W Q+ +EI +W +P+++
Sbjct: 129 PEKFIFSLGYANWIAGQMEQEIINNFWLTLPANPNLL 165
>gi|297170742|gb|ADI21764.1| putative transcriptional regulator [uncultured gamma
proteobacterium HF0130_22O14]
Length = 184
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 75/187 (40%), Gaps = 15/187 (8%)
Query: 116 TIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLD 175
+I+ G LIA+ L + FE+TV L+ G G+I+N+P ++E+ S +
Sbjct: 2 SINNSLVGQFLIASPSLKDPN-FEKTVTLVCEQNESGSLGLIINKPLHQDLEEVISQMDL 60
Query: 176 AAGTFSDRPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
+ GGP L+ G + SG+++ E + T T
Sbjct: 61 NEIDTKEISFLQGGPVGLDRGFV----------IHNSGLWKNTTE-VNENTFITSSRDII 109
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLW 293
+ GP F G GW QL E+ W A P+++ + T WE+ +
Sbjct: 110 DDIIDGQGPNHSLFIVGYSGWGPGQLESELMTNSWISAPYDPAIV-FDIDTDSRWEKSID 168
Query: 294 LMGRRKV 300
+G + V
Sbjct: 169 SLGIKSV 175
>gi|408823369|ref|ZP_11208259.1| hypothetical protein PgenN_09595 [Pseudomonas geniculata N1]
Length = 188
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 14/135 (10%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPL--EE 193
F R+V LI + G G+++N+PS ++ E+ + + G R + GGP+ E
Sbjct: 24 FARSVALICQHDENGAMGVLVNQPSEYTLGEVLAQMDITTGDGDLQARMVLNGGPVHPER 83
Query: 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG 253
G + D G +GLY T + E + R GP + GC G
Sbjct: 84 GFVIHDDARAWDSSLTVG------DGLYLTTSRDI---LEAMARGE-GPANAVVTLGCAG 133
Query: 254 WEKEQLNEEIRAGYW 268
W QL E+ W
Sbjct: 134 WGAGQLESELSENSW 148
>gi|387220225|gb|AFJ69821.1| hypothetical protein NGATSA_3051600 [Nannochloropsis gaditana
CCMP526]
Length = 328
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 15/130 (11%)
Query: 174 LDAAGTFSDRPLFFGGPLE-EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAA 232
+D++G F +P+ GG E +G+F++ E+ ++ + +GL+FG T A
Sbjct: 181 VDSSG-FKIQPVHLGGTGESDGIFMIHTY---PELERA--TQVTNDGLFFGGNYT--AAQ 232
Query: 233 EMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLG------ 286
E+V+ F+FF W +L EI W A S VI G G
Sbjct: 233 ELVREQGASSSRFKFFIQQTLWAPGELKREIEDKVWYPAQVSKDVILKNRGREGPKMAKP 292
Query: 287 LWEELLWLMG 296
LW E+L LMG
Sbjct: 293 LWTEVLELMG 302
>gi|451972136|ref|ZP_21925348.1| hypothetical protein C408_1960 [Vibrio alginolyticus E0666]
gi|451931974|gb|EMD79656.1| hypothetical protein C408_1960 [Vibrio alginolyticus E0666]
Length = 187
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 32/156 (20%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---------LDAAGTFSDRPLFFG 188
F+ +VI + G G+++N P +++ M V +A+ DRP++ G
Sbjct: 19 FQNSVIYVCEHNEDGAMGLMINAPVDITVGNMLKQVEVQPVHPRLFEAS---LDRPVYNG 75
Query: 189 GPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETV----GCAAEMVKRNAVGP 242
GP+ E G L PK + +S V Q+ + L T + G AE P
Sbjct: 76 GPISEDRGFILHKPK----DYYESSV--QMTDDLAVTTSRDILSVLGTEAE--------P 121
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
D+ G GW QL E+ W +P +I
Sbjct: 122 SDYLVALGYSGWSAGQLENELVENSWLTIEATPEII 157
>gi|365847862|ref|ZP_09388344.1| putative ACR [Yokenella regensburgei ATCC 43003]
gi|364571718|gb|EHM49295.1| putative ACR [Yokenella regensburgei ATCC 43003]
Length = 187
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 65/173 (37%), Gaps = 29/173 (16%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-----------SLMSIKEMRSTVLDAAGTFSDRPL 185
IF R V+ I G GII+N+P L + E R + D+P+
Sbjct: 18 IFRRAVVYICEYNEDGAMGIIINKPLENLKVEGILEKLKIVPEPRDPAIRL-----DKPV 72
Query: 186 FFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPE 243
GGPL E G L +P D + + + ET+G A + P
Sbjct: 73 MLGGPLAEDRGFILHTPP--SDFSSSIRISDNTVVTTSRDVLETLGTAQQ--------PS 122
Query: 244 DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
+ G WEK QL +EI W + +++ ++ W E L+G
Sbjct: 123 EVLVALGYASWEKGQLEQEILDNAWLTSPADMNIL-FKTPIADRWREAARLIG 174
>gi|452825362|gb|EME32359.1| putative transcriptional regulator [Galdieria sulphuraria]
Length = 436
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 43/182 (23%)
Query: 117 IHEPEKGCLLIATEKLDGVHIFERTVILILSMEPM-GPSGIILN-------RPSLM---S 165
I E +KG LL++ L G F R++ILI P G G LN PS++
Sbjct: 187 IDEIQKGALLVSHPLLPGA--FARSLILIHEYYPQTGAKGFCLNGSKVGVFEPSVLLSSG 244
Query: 166 IKEMRS--TVLDAAGTF-------------SDRPLFFGGPLEEG-LFLVSP---KGGGDE 206
+ ++R V A T S +P+++GGP+ LF++ P G
Sbjct: 245 VSKLRGELNVELADNTLGRKDDENEQVYPLSPQPVYWGGPVATNTLFVLHPFPEMEGAVA 304
Query: 207 VGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAG 266
VG G+Y G + + + +++ EDF GC W +QL E++
Sbjct: 305 VG---------HGIYMGGRSS--AIIDSIRKGKAHFEDFLLLAGCSSWSSDQLEGELKQH 353
Query: 267 YW 268
W
Sbjct: 354 SW 355
>gi|163745660|ref|ZP_02153020.1| hypothetical protein OIHEL45_08715 [Oceanibulbus indolifex HEL-45]
gi|161382478|gb|EDQ06887.1| hypothetical protein OIHEL45_08715 [Oceanibulbus indolifex HEL-45]
Length = 184
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 68/166 (40%), Gaps = 26/166 (15%)
Query: 123 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMR-STVLDAAGTFS 181
G LL+A + G F +VI + + G G+++N+P+ E+R S VLD
Sbjct: 5 GKLLVAMPGM-GDPRFAHSVIYLSAHSEQGAMGLMVNKPA----PELRLSDVLDQ--LVE 57
Query: 182 DRP-------LFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEM 234
D P + FGGP+E G V S + +E L G + ++
Sbjct: 58 DTPPQAKSLVVHFGGPVETGRGFVL---------HSDEYRSAIETLRVGDGIALTATRDI 108
Query: 235 VKRNAVG--PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
++ A+G P + G GW QL EI W SP VI
Sbjct: 109 LEDIAIGKGPARAQLMLGYAGWGPGQLEGEIAQNGWLTCEASPEVI 154
>gi|397164156|ref|ZP_10487614.1| hypothetical protein Y71_3946 [Enterobacter radicincitans DSM
16656]
gi|396094711|gb|EJI92263.1| hypothetical protein Y71_3946 [Enterobacter radicincitans DSM
16656]
Length = 187
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 27/172 (15%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
+F R+V+ I G G+I+N+P ++ +++ D A D+P+ GG
Sbjct: 18 LFRRSVVYICEYNDEGAMGLIINKPLENLKVDGVLEKLKIQPEARDPAIRL-DKPVLLGG 76
Query: 190 PLEE--GLFLVSPKG---GGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPED 244
PL E G L +P V + V + L ET+G A + P +
Sbjct: 77 PLAEDRGFILHTPPATFASSIRVSDNTVVTTSRDVL-----ETLGTAEQ--------PSE 123
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G WEK QL +EI W A +++ ++ W E L+G
Sbjct: 124 VLVALGYASWEKGQLEQEIMDNAWLTAPADLNIL-FKTPIADRWREAAKLIG 174
>gi|34499364|ref|NP_903579.1| hypothetical protein CV_3909 [Chromobacterium violaceum ATCC 12472]
gi|34105214|gb|AAQ61570.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 192
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 16/147 (10%)
Query: 137 IFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---LDAAGTFSDRPLFFGGPLE- 192
+F ++++ + G G+I+N+PS +++ ++ + LD T + ++FGGP++
Sbjct: 27 LFAKSLVYLCEHGEHGAMGLIINKPSGIAMAQLFDQIDLPLDDEDTRTGL-VYFGGPVQP 85
Query: 193 -EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGC 251
G L P G +S + V + + T + V A K+ PE G
Sbjct: 86 DRGFVLHQPAGNW----QSSLM--VTDDIALTTSKDVLVAVSEGKK----PEQLLISLGY 135
Query: 252 CGWEKEQLNEEIRAGYWTVAACSPSVI 278
GW QL +EI W PS++
Sbjct: 136 AGWSAGQLEKEIADNGWLTVPAEPSIV 162
>gi|262393234|ref|YP_003285088.1| hypothetical protein VEA_002461 [Vibrio sp. Ex25]
gi|262336828|gb|ACY50623.1| hypothetical protein VEA_002461 [Vibrio sp. Ex25]
Length = 174
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 32/156 (20%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---------LDAAGTFSDRPLFFG 188
F+ +VI + G G+++N P +++ M V +A+ DRP++ G
Sbjct: 6 FQNSVIYVCEHNEDGAMGLMINAPVDITVGNMLKQVEVQPVHPRLFEAS---LDRPVYNG 62
Query: 189 GPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETV----GCAAEMVKRNAVGP 242
GP+ E G L PK + +S V Q+ + L T + G AE P
Sbjct: 63 GPISEDRGFILHKPK----DYYESSV--QMTDDLAVTTSRDILSVLGTEAE--------P 108
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
D+ G GW QL E+ W +P +I
Sbjct: 109 SDYLVALGYSGWSAGQLENELVENSWLTIEATPEII 144
>gi|425064573|ref|ZP_18467698.1| protein YqgE [Pasteurella multocida subsp. gallicida X73]
gi|404380759|gb|EJZ77248.1| protein YqgE [Pasteurella multocida subsp. gallicida X73]
Length = 185
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 125 LLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEM---RSTVLDAAGTFS 181
LIA +++ + F +V+ I G G++LN+P+ +SI E+ + ++ T+
Sbjct: 7 FLIAMPQMEDDY-FAHSVVYICEHNDQGTMGLVLNQPTDLSIAELCAKMNFMMKTDRTYG 65
Query: 182 DRPLFFGGP--LEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTK-ETVGCAAEMVKR- 237
+ + GGP +E G L + Q + Y T ++ +A+++
Sbjct: 66 NDLVLAGGPVNIERGFILHTKTA------------QTFKHSYKVTDLLSLTTSADIIDTF 113
Query: 238 -NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
A PE + GC W QL EI W V + ++
Sbjct: 114 GTAQAPEKYLVALGCASWTVNQLESEIANNDWLVVPANNRIL 155
>gi|421498267|ref|ZP_15945392.1| hypothetical protein B224_001462 [Aeromonas media WS]
gi|407182725|gb|EKE56657.1| hypothetical protein B224_001462 [Aeromonas media WS]
Length = 184
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 15/161 (9%)
Query: 122 KGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAAGTF 180
+ L+A L V+ FER+++ + G G+++N P MS+ M + + L+ T
Sbjct: 5 QNHFLLAMPSLTDVY-FERSLVYLCEHSSEGAMGLVVNIPVDMSLDAMLTKLKLNPPATA 63
Query: 181 S-DRPLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKR 237
+P+ GGP+ + G L S + G + + V +++M ET+G
Sbjct: 64 EMKQPVLQGGPVHADRGFVLHSFRPGFNSTLQ--VSDEMMVTTSKDILETLGTDE----- 116
Query: 238 NAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
P+ + G GW QL +E+ G W V +P ++
Sbjct: 117 ---APDHWLVALGYAGWSAGQLEQELVDGAWLVIPPNPRLV 154
>gi|186477078|ref|YP_001858548.1| hypothetical protein Bphy_2327 [Burkholderia phymatum STM815]
gi|226701253|sp|B2JFD4.1|Y2327_BURP8 RecName: Full=UPF0301 protein Bphy_2327
gi|184193537|gb|ACC71502.1| protein of unknown function DUF179 [Burkholderia phymatum STM815]
Length = 191
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 9/143 (6%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEM--RSTVLDAAGTFSDRPLFFGGPLEEGL 195
F TV+ + G G+++NRP+ + ++ + R + P++FGGP++
Sbjct: 26 FSGTVVYLCDHSERGALGLVINRPTDIDLQALFNRIDLKLEIEPLLHVPVYFGGPVQTER 85
Query: 196 FLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWE 255
V + S QV GL T + V A K GPE F G GW
Sbjct: 86 GFVLHDASENTYTSS---MQVPGGLEMTTSKDVLEAVASGK----GPERFLLTLGHAGWG 138
Query: 256 KEQLNEEIRAGYWTVAACSPSVI 278
QL +EI W P ++
Sbjct: 139 AGQLEDEISKNGWLTVEADPKIV 161
>gi|308126684|ref|ZP_05911772.2| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
gi|308107482|gb|EFO45022.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
Length = 198
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 28/154 (18%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS-------DRPLFFGGP 190
F+ +VI + G G+++N P +++ M V D DRP++ GGP
Sbjct: 30 FQNSVIYVCEHNEEGAMGLMINAPVDITVGNMLKQV-DVQPVHPRLFEASLDRPVYNGGP 88
Query: 191 LEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETV----GCAAEMVKRNAVGPED 244
+ E G L PK + +S + Q+ + L T + G AE P D
Sbjct: 89 ISEDRGFILHKPK----DYYESSI--QMTDDLAVTTSRDILSVLGTEAE--------PSD 134
Query: 245 FRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ G GW QL E+ W +P +I
Sbjct: 135 YLVALGYSGWSAGQLENELVENSWLTIEATPEII 168
>gi|269960440|ref|ZP_06174813.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834867|gb|EEZ88953.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 187
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 33/174 (18%)
Query: 138 FERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTV---------LDAAGTFSDRPLFFG 188
F+ +VI + G G+++N P +++ M V +A+ DRP++ G
Sbjct: 19 FQNSVIYVCEHNEEGAMGLMINAPVDITVGNMLKQVEVQPVHPRLFEAS---LDRPVYNG 75
Query: 189 GPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETV----GCAAEMVKRNAVGP 242
GP+ E G L PK + +S + Q+ + L T + + G AE P
Sbjct: 76 GPVSEDRGFILHKPK----DYYESSI--QMTDELTVTTSKDILSVLGTEAE--------P 121
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
D+ G GW QL E+ W +P +I E+ + W++ + +G
Sbjct: 122 SDYLVALGYSGWSAGQLEAELVENSWLTIEATPEII-FETPIIDRWKKAVEKLG 174
>gi|424925417|ref|ZP_18348778.1| transcriptional regulator [Pseudomonas fluorescens R124]
gi|404306577|gb|EJZ60539.1| transcriptional regulator [Pseudomonas fluorescens R124]
Length = 190
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 19/138 (13%)
Query: 138 FERTVILILSMEPMGPSGIILNRP---SLMSIKEMRSTVLDAAGTFSDRPLFFGGPLEEG 194
F T+ I+ G G+++NRP +L I E +D P+F GGP++
Sbjct: 25 FAHTLTYIVEHTANGAMGLVVNRPQELNLADILEQLRPDIDPPALCQHVPIFIGGPVQTD 84
Query: 195 L-FLVSPKGGGDEVGKSGVFEQVME---GLYFGTKETVGCAAEMVKRNAVGPEDFRFFDG 250
F++ P GKS F+ +E L T + V A + VGP G
Sbjct: 85 RGFVLHP------AGKS--FQATVELDGDLALSTSQDVLFAIA----DGVGPSKSLIALG 132
Query: 251 CCGWEKEQLNEEIRAGYW 268
GWE QL E+ W
Sbjct: 133 YAGWEAGQLEAELADNAW 150
>gi|432373515|ref|ZP_19616550.1| transcriptional regulator [Escherichia coli KTE11]
gi|430894556|gb|ELC16844.1| transcriptional regulator [Escherichia coli KTE11]
Length = 211
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 67/169 (39%), Gaps = 21/169 (12%)
Query: 137 IFERTVILILSMEPMGPSGIILNRP-------SLMSIKEMRSTVLDAAGTFSDRPLFFGG 189
IF R+V+ I P G GII+N+P ++ ++ D + D+P+ GG
Sbjct: 42 IFRRSVVYICEHNPEGAMGIIINKPLENLKIEGILEKLKITPEPRDESIRL-DKPVMLGG 100
Query: 190 PLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRF 247
PL E G L +P + + + + ET+G + P D
Sbjct: 101 PLAEDRGFILHTPP--SNFTSSIRISDNTVMTTSRDVLETLGTDKQ--------PSDVMV 150
Query: 248 FDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMG 296
G W+K QL +EI W A +++ ++ W + L+G
Sbjct: 151 ALGYSSWDKGQLEQEILDNAWLTAPADLNIL-FKTPIADRWRDAARLIG 198
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.137 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,078,200,809
Number of Sequences: 23463169
Number of extensions: 220264159
Number of successful extensions: 397574
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 1247
Number of HSP's that attempted gapping in prelim test: 395767
Number of HSP's gapped (non-prelim): 1449
length of query: 301
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 160
effective length of database: 9,050,888,538
effective search space: 1448142166080
effective search space used: 1448142166080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)