Query 022172
Match_columns 301
No_of_seqs 199 out of 874
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 15:06:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022172.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022172hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ew0_A Hypothetical protein ac 100.0 1.9E-51 6.4E-56 366.0 15.0 168 118-298 3-173 (192)
2 2gzo_A UPF0301 protein SO3346; 100.0 1.6E-51 5.3E-56 367.3 12.9 167 119-298 2-176 (195)
3 2haf_A Putative translation re 100.0 1.8E-51 6.3E-56 370.7 11.5 174 110-298 9-191 (211)
4 2do8_A UPF0301 protein HD_1794 100.0 6.2E-51 2.1E-55 361.5 9.5 166 120-298 4-177 (188)
5 2gs5_A Conserved hypothetical 100.0 1.8E-50 6.1E-55 361.2 10.6 174 110-298 3-184 (198)
6 1jli_A Interleukin 3, multi-CS 31.4 18 0.00062 28.9 1.5 13 69-81 88-100 (112)
7 2l3o_A Interleukin 3; cytokine 17.5 72 0.0025 25.9 2.5 31 49-81 74-104 (127)
8 3edo_A Flavoprotein, putative 9.0 4.6E+02 0.016 20.4 5.0 24 242-265 106-129 (151)
9 2do5_A Splicing factor 3B subu 8.1 1.7E+02 0.0058 20.3 1.7 16 250-265 7-22 (58)
10 3ndd_B Alpha-1-antitrypsin; se 7.2 4E+02 0.014 16.3 3.0 24 138-162 8-34 (36)
No 1
>2ew0_A Hypothetical protein aciad0353; Q5FF54, ASR1, NESG, structural genomics, PSI, protein struct initiative; 1.40A {Acinetobacter SP} SCOP: d.310.1.1
Probab=100.00 E-value=1.9e-51 Score=365.98 Aligned_cols=168 Identities=24% Similarity=0.402 Sum_probs=146.1
Q ss_pred CCCCCCcEEEecCCCCCCCCccceEEEEEEeCCCCcEEEEecCCCCccHHHHHHhhhcccC-CCCCCCeEecCcccc--C
Q 022172 118 HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG-TFSDRPLFFGGPLEE--G 194 (301)
Q Consensus 118 ~~p~~G~lLIA~P~L~d~~~F~RSVVLL~eH~e~Ga~GlILNRP~~~~l~~ll~~~~d~~~-~~~~~pv~~GGPV~~--~ 194 (301)
..+++|+||||||.|.|+ +|+|||||||+|+++||||||||||++++++++++++ ++.. .+.+.|||+||||++ +
T Consensus 3 ~~~l~G~lLIA~P~l~d~-~F~rSVIli~eH~~~Ga~GlIlNrP~~~~l~~ll~~l-~~~~~~~~~~~v~~GGPV~~~rg 80 (192)
T 2ew0_A 3 KQYLTHRCLIAPPEMADD-FFANTVIYLARHDEEGAQGIIINRPAGIQIKELLNDL-DIDADNVNPHEVLQGGPLRPEAG 80 (192)
T ss_dssp --CCTTEEEECCTTCCCT-TTTTCEEEEEEEETTEEEEEECSCEEEEEHHHHHHHT-TCCCTTCCCCEEEECCSEEEEEE
T ss_pred cccCCCeEEEeCCCCCCC-CccceEEEEEEeCCCceeEEEecCCCCCCHHHHHHhh-CcccccCCCCeeEECCCcCCCcE
Confidence 467999999999999975 9999999999999999999999999999999998876 3321 123789999999996 7
Q ss_pred eEEEccCCCCCccCCCcceeeeecceeeccchhhhhhHHHHHhcCCCCCcEEEEEeecCCChhHHHHHHHcCCeEEccCC
Q 022172 195 LFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACS 274 (301)
Q Consensus 195 ~vLh~~~~~~~~~~~~~~~~eI~~Gl~~g~~~~i~~a~elv~~g~~~p~d~rfflGYaGW~~GQLE~EI~~g~W~va~as 274 (301)
|+||......+ .+.+|.+|||++++.++ .+.+.+| .+|.+||||+|||||++||||+||++|+|++++|+
T Consensus 81 fvLH~~~~~~~------~s~~v~~gv~lt~s~d~---l~~i~~~-~~p~~~~~flGYaGW~~GQLe~Ei~~n~Wl~~~a~ 150 (192)
T 2ew0_A 81 FVLHTGQPTWH------SSIAVGENVCITTSKDI---LDAIAHN-EGVGRYQIALGYASWGKNQLEDEIARGDWLICDAD 150 (192)
T ss_dssp EEEEESCCCSS------SEEEEETTEEEECSSHH---HHHHHTT-CSCCSEEEEEEEEEECTTHHHHHHHTTCCEEEECC
T ss_pred EEEEeCCCCCC------CceEecCCeeeeCCHHH---HHHHhcC-CCCccEEEEEeecCCCHHHHHHHHHcCCEEEecCC
Confidence 89988643221 25899999999999885 4556666 67899999999999999999999999999999999
Q ss_pred CCeeecCCCchhHHHHHHHhcCCC
Q 022172 275 PSVIGLESGTLGLWEELLWLMGRR 298 (301)
Q Consensus 275 ~~~i~f~~~~~~LW~evL~~~Gg~ 298 (301)
+++| |+++++++|+++|++||++
T Consensus 151 ~~~l-f~~~~~~~W~~al~~lG~~ 173 (192)
T 2ew0_A 151 MDLI-FNLPYDDRWDAAYKKIGVD 173 (192)
T ss_dssp HHHH-TTSCGGGHHHHHHHHGGGS
T ss_pred HHHh-hCCCHHHHHHHHHHHhCCC
Confidence 9999 9999999999999999987
No 2
>2gzo_A UPF0301 protein SO3346; GFT-protein structure, nesgc, alpha-beta, structural genomics, PSI, protein structure initiative; NMR {Shewanella oneidensis} SCOP: d.310.1.1
Probab=100.00 E-value=1.6e-51 Score=367.27 Aligned_cols=167 Identities=23% Similarity=0.440 Sum_probs=146.9
Q ss_pred CCCCCcEEEecCCCCCCCCccceEEEEEEeCCCCcEEEEecCCCCccHHHHHHhhhcccC----C--CCCCCeEecCccc
Q 022172 119 EPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG----T--FSDRPLFFGGPLE 192 (301)
Q Consensus 119 ~p~~G~lLIA~P~L~d~~~F~RSVVLL~eH~e~Ga~GlILNRP~~~~l~~ll~~~~d~~~----~--~~~~pv~~GGPV~ 192 (301)
++++|+||||||.|.|+ +|+|||||||+||++||||||||||++++++++++++ ++.. . +.+.|||+||||+
T Consensus 2 ~~l~G~lLIA~P~l~d~-~F~rSVVli~eH~~~Ga~GlIiNrP~~~~l~~ll~~l-~~~~~~~~~~~~~~~~v~~GGPV~ 79 (195)
T 2gzo_A 2 ESLQNHFLIAMPSLDDT-FFERTVIYLCEHDEKGAMGLVINKPLGIEVNSLLEQM-DLPTEQVSADLAMGSQVLMGGPVS 79 (195)
T ss_dssp CCCSSEEEEECTTSCSC-SSSSEEEEECCCBTTBCCEEECSSCCCBCHHHHHHHH-TSCSSCCCCCCCCCSCBEESCSBT
T ss_pred CCCCCeEEEeCCCCCCC-CccccEEEEEEeCCCceeEEEecCCCCCcHHHHHHhh-CcccccccccccCCCeEEECCCcC
Confidence 58999999999999975 9999999999999999999999999999999999876 3211 1 4578999999999
Q ss_pred c--CeEEEccCCCCCccCCCcceeeeecceeeccchhhhhhHHHHHhcCCCCCcEEEEEeecCCChhHHHHHHHcCCeEE
Q 022172 193 E--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270 (301)
Q Consensus 193 ~--~~vLh~~~~~~~~~~~~~~~~eI~~Gl~~g~~~~i~~a~elv~~g~~~p~d~rfflGYaGW~~GQLE~EI~~g~W~v 270 (301)
+ +|+||......+ .+.+|.+|||++++.++ .+.+.+| .+|+++|||+|||||++||||+||++|+|++
T Consensus 80 ~~rgfvLH~~~~~~~------~s~~v~~gv~lt~s~di---l~~i~~~-~~p~~~~~flGYaGW~~GQLE~Ei~~n~Wl~ 149 (195)
T 2gzo_A 80 QDRGFVLHTSQPYWA------NSTELGSGLMLTTSRDV---LTAIGSK-RSPDKFLVALGYAGWSKNQLEQELADNSWLT 149 (195)
T ss_dssp TTSCCEEEECCSCSS------SCCCSSSSEEEECTTHH---HHHHTSC-CCSSCEECEECBCTHHHHCCHHHHHHHTCEE
T ss_pred CCcEEEEEeCCCCCC------CceEecCCeeeeCCHHH---HHHHhcC-CCCccEEEEEeecCCCHHHHHHHHHcCCEEE
Confidence 6 799998643221 25789999999999885 4556666 6789999999999999999999999999999
Q ss_pred ccCCCCeeecCCCchhHHHHHHHhcCCC
Q 022172 271 AACSPSVIGLESGTLGLWEELLWLMGRR 298 (301)
Q Consensus 271 a~as~~~i~f~~~~~~LW~evL~~~Gg~ 298 (301)
++|++++| |+++++++|+++|++||++
T Consensus 150 ~~a~~~~l-f~~~~~~~W~~al~~lG~~ 176 (195)
T 2gzo_A 150 IPADHALL-FDINHEDRWQQASRSLGFE 176 (195)
T ss_dssp EECCHHHH-TTSCSSHHHHHHHHCCCCC
T ss_pred ecCCHHHh-cCCCHHHHHHHHHHHhCCC
Confidence 99999999 9999999999999999987
No 3
>2haf_A Putative translation repressor; alpha/beta, X-RAY crystallography, structural genomics, PSI, protein structure initiative; 2.88A {Vibrio cholerae} SCOP: d.310.1.1 PDB: 2aj2_A
Probab=100.00 E-value=1.8e-51 Score=370.74 Aligned_cols=174 Identities=22% Similarity=0.433 Sum_probs=150.5
Q ss_pred CCccccccCCCCCCcEEEecCCCCCCCCccceEEEEEEeCCCCcEEEEecCCCCccHHHHHHhhhcccCC-------CCC
Q 022172 110 GDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT-------FSD 182 (301)
Q Consensus 110 ~~~WAh~~~~p~~G~lLIA~P~L~d~~~F~RSVVLL~eH~e~Ga~GlILNRP~~~~l~~ll~~~~d~~~~-------~~~ 182 (301)
.-.|.|.+ +++|+||||||.|.|+ +|+|||||||+|+++||||||||||++++++++++++ ++... +.+
T Consensus 9 ~~~~~hs~--~l~G~lLIA~P~L~D~-~F~rSVVliceH~~~GamGlIiNrP~~~~l~~ll~~l-~~~~~~~~~~~~~~~ 84 (211)
T 2haf_A 9 DIEVGHSM--NLTNHFLVAMPSMKDP-YFKRSVIYICEHNQDGAMGLMINAPIDITVGGMLKQV-DIEPAYPQSHQENLK 84 (211)
T ss_dssp CCCCCCCC--CCTTEEEEECSSCCSG-GGTTCEEEEEEEETTEEEEEESSCEEEEEHHHHHHHT-TCCCSSCCCCCSGGG
T ss_pred CCCCcCCC--CCCCeEEEeCCCCCCC-CcCccEEEEEEeCCCCeeEEEecCCCCCcHHHHHHhh-ccccccccccccccC
Confidence 44588888 4999999999999975 9999999999999999999999999999999999876 33111 346
Q ss_pred CCeEecCcccc--CeEEEccCCCCCccCCCcceeeeecceeeccchhhhhhHHHHHhcCCCCCcEEEEEeecCCChhHHH
Q 022172 183 RPLFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLN 260 (301)
Q Consensus 183 ~pv~~GGPV~~--~~vLh~~~~~~~~~~~~~~~~eI~~Gl~~g~~~~i~~a~elv~~g~~~p~d~rfflGYaGW~~GQLE 260 (301)
.|||+||||++ +|+||......+ .+.+|.+|||++++.++ ++.+.+| .+|+++|||+|||||++||||
T Consensus 85 ~~v~~GGPV~~~rgfvLH~~~~~~~------~s~~v~~gv~lt~s~di---l~~i~~~-~~p~~~~~flGYaGW~~GQLE 154 (211)
T 2haf_A 85 KPVFNGGPVSEDRGFILHRPRDHYE------SSMKMTDDIAVTTSKDI---LTVLGTE-AEPEGYIVALGYSGWSAGQLE 154 (211)
T ss_dssp SEEEECCSEEEEEEEEEECCCSCCS------SEEECSSSCEEECSGGG---GGGTTST-TSCSSEEEEEEEEEEETTHHH
T ss_pred CeEEECCCccCCcEEEEEecCCCCC------CceEecCCeeecCCHHH---HHHHhcC-CCCccEEEEeeecCCCHHHHH
Confidence 79999999996 788987643221 25899999999999885 3445555 578999999999999999999
Q ss_pred HHHHcCCeEEccCCCCeeecCCCchhHHHHHHHhcCCC
Q 022172 261 EEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRR 298 (301)
Q Consensus 261 ~EI~~g~W~va~as~~~i~f~~~~~~LW~evL~~~Gg~ 298 (301)
+||++|+|++++|++++| |+++++++|+++|++||++
T Consensus 155 ~Ei~~n~Wl~~~a~~~~l-F~~~~~~~W~~al~~lG~d 191 (211)
T 2haf_A 155 VELTENSWLTIEADPELI-FNTPVHEKWQKAIQKLGIS 191 (211)
T ss_dssp HHHHTTSEEEEECCHHHH-HSSCGGGHHHHHHHHTSCC
T ss_pred HHHHcCCEEEecCCHHHh-cCCCHHHHHHHHHHHhCCC
Confidence 999999999999999999 9999999999999999987
No 4
>2do8_A UPF0301 protein HD_1794; NESG, GFT structral genomics, HDR14, structural genomics, PSI, protein structure initiative; NMR {Haemophilus ducreyi} SCOP: d.310.1.1
Probab=100.00 E-value=6.2e-51 Score=361.55 Aligned_cols=166 Identities=27% Similarity=0.478 Sum_probs=144.9
Q ss_pred CCCCcEEEecCCCCCCCCccceEEEEEEeCCCCcEEEEecCCCCccHHHHHHhhhcccCC-----CCCCCeEecCcccc-
Q 022172 120 PEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT-----FSDRPLFFGGPLEE- 193 (301)
Q Consensus 120 p~~G~lLIA~P~L~d~~~F~RSVVLL~eH~e~Ga~GlILNRP~~~~l~~ll~~~~d~~~~-----~~~~pv~~GGPV~~- 193 (301)
+++|+||||||.|.|+ +|+|||||||+|+++||||||||||++++++++++++ ++... +.+.|||+||||++
T Consensus 4 ~l~G~lLIA~P~l~d~-~F~rSVVli~eH~~~Ga~GlIlNrp~~~~l~~ll~~~-~~~~~~~~~~~~~~~v~~GGPV~~~ 81 (188)
T 2do8_A 4 NLQGKFIIATPEMDDE-YFDRTVIYICEHNDNGTIGVIINTPTDLSVLELLTRM-DFQMAKPRIYTQDQMVLNGGPVNQD 81 (188)
T ss_dssp CCTTEEEECCCSCTTC-CSSCCCCEEEEEETTEEEEECSCCEEEEEHHHHHHHT-TCCCCCCGGGCCCCEEEECCSEEEE
T ss_pred CCCCeEEEeCCCCCCC-CcCccEEEEEEeCCCCceEEEEeCCCCCCHHHHHHhh-cccccccccccCCCeEEECCCccCC
Confidence 4899999999999975 9999999999999999999999999999999999876 32111 35789999999996
Q ss_pred -CeEEEcc-CCCCCccCCCcceeeeecceeeccchhhhhhHHHHHhcCCCCCcEEEEEeecCCChhHHHHHHHcCCeEEc
Q 022172 194 -GLFLVSP-KGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271 (301)
Q Consensus 194 -~~vLh~~-~~~~~~~~~~~~~~eI~~Gl~~g~~~~i~~a~elv~~g~~~p~d~rfflGYaGW~~GQLE~EI~~g~W~va 271 (301)
+|+||.. ....+ .+.+|.+|||++++.++ .+.+.++ .+|+++|||+|||||++||||+||++|+|+++
T Consensus 82 rgfvLH~~~~~~~~------~s~~v~~gv~lt~s~di---l~~i~~~-~~p~~~~~~lGYaGW~~GQLe~Ei~~n~Wl~~ 151 (188)
T 2do8_A 82 RGFIVHSKTDHEFT------HSYKVTDDITLTTSGDV---LDSFGTQ-TAPEKFIVCLGCSTWKPHQLEQEIAQNYWLLS 151 (188)
T ss_dssp EEEEEECCCTTCCS------SEEESSSSCEEECSSHH---HHHTTST-TCCSCEEEEEEEEEECTTHHHHHHHTTSSEEE
T ss_pred cEEEEEeCCCCCCC------CcEEecCCeeecCCHHH---HHHHhcC-CCCccEEEEEeecCCCHHHHHHHHHcCCEEEe
Confidence 7889873 33211 25899999999999885 4556665 67899999999999999999999999999999
Q ss_pred cCCCCeeecCCCchhHHHHHHHhcCCC
Q 022172 272 ACSPSVIGLESGTLGLWEELLWLMGRR 298 (301)
Q Consensus 272 ~as~~~i~f~~~~~~LW~evL~~~Gg~ 298 (301)
+|++++| |+++++++|+++|++||++
T Consensus 152 ~a~~~~l-f~~~~~~~W~~al~~lG~~ 177 (188)
T 2do8_A 152 EANNQTL-FETSYLDRWVEANEMLGIS 177 (188)
T ss_dssp ECCTHHH-HTTTSSCCSSHHHHTTTSC
T ss_pred cCCHHHh-hCCCHHHHHHHHHHHcCCC
Confidence 9999999 9999999999999999986
No 5
>2gs5_A Conserved hypothetical protein; corvnebacterium diphtheria, structural genomics, PSI; 1.50A {Corynebacterium diphtheriae nctc 13129ORGANISM_TAXID} SCOP: d.310.1.1 PDB: 2hrx_A
Probab=100.00 E-value=1.8e-50 Score=361.19 Aligned_cols=174 Identities=22% Similarity=0.397 Sum_probs=147.7
Q ss_pred CCcccccc--CCCCCCcEEEecCCCCCCCCccceEEEEEEeCCCCcEEEEecCCCCccHHHHHHhhhcccCCCCCCCeEe
Q 022172 110 GDKWAHTI--HEPEKGCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFF 187 (301)
Q Consensus 110 ~~~WAh~~--~~p~~G~lLIA~P~L~d~~~F~RSVVLL~eH~e~Ga~GlILNRP~~~~l~~ll~~~~d~~~~~~~~pv~~ 187 (301)
.++|+|.. ..+++|+||||||.|.|+ +|+|||||||+|+++||||||||||++++++++++++... .+.+.|||+
T Consensus 3 ~~~~~~~~~~~~~l~G~lLIA~P~L~d~-~F~rSVVli~eH~~~Ga~GlIlNrp~~~~l~~ll~~~~~~--~~~~~~v~~ 79 (198)
T 2gs5_A 3 ADRLFNAMERNEPAPGMVLVAAPSMESE-DFARSVILIIEHSEYATFGVNLASRSDVAVFNVIPEWVPC--VTKPQALYI 79 (198)
T ss_dssp CGGGGSSSCCCCCCTTEEEEECTTCCCT-TTTTCEEEEEEECSSCEEEEESSCEEEEEGGGTCGGGGGG--CCSSCEEEE
T ss_pred cchhcccccccCCCCCeEEEeCCCCCCC-CccccEEEEEEeCCCCeeEEEecCCCCCCHHHHHHhhccc--ccCCCeEEE
Confidence 56899995 568999999999999975 9999999999999999999999999999999998876322 235789999
Q ss_pred cCcccc--CeEEEccCCCCCccCCCcceeeeecc----eeeccchhhhhhHHHHHhcCCCCCcEEEEEeecCCChhHHHH
Q 022172 188 GGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEG----LYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNE 261 (301)
Q Consensus 188 GGPV~~--~~vLh~~~~~~~~~~~~~~~~eI~~G----l~~g~~~~i~~a~elv~~g~~~p~d~rfflGYaGW~~GQLE~ 261 (301)
||||++ +|+||......+.... .+.+|.+| +|++++.++ ++.+ .+++|||+|||||++||||+
T Consensus 80 GGPV~~~~gfvLH~~~~~~~~~~~--~s~~v~~g~~~~v~l~~s~d~---l~~~------~~~~~~flGYaGW~~GQLe~ 148 (198)
T 2gs5_A 80 GGPLNQQSVVGVGVTAQGVDAARV--DNLTRLANRLVMVNLGADPEE---IKPL------VSGMRLFAGHAEWAPGQLAQ 148 (198)
T ss_dssp CCSEEEEEEEEEEEECTTCCGGGC--TTEEEEETTEEEECTTSCHHH---HGGG------EEEEEEEEEEEEECTTHHHH
T ss_pred CCCccCCeEEEEEecCccccccCC--CceEecCCCceeEEEcCCHHH---HHHH------hhccEEEeeEcCCChHHHHH
Confidence 999996 7899986432210001 24799999 999998664 2222 17899999999999999999
Q ss_pred HHHcCCeEEccCCCCeeecCCCchhHHHHHHHhcCCC
Q 022172 262 EIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRR 298 (301)
Q Consensus 262 EI~~g~W~va~as~~~i~f~~~~~~LW~evL~~~Gg~ 298 (301)
||++|+|++++|++++| |+++++++|+++|++||++
T Consensus 149 Ei~~n~Wl~~~a~~~~l-f~~~~~~~W~~al~~lG~~ 184 (198)
T 2gs5_A 149 EIENGDWFVAPALPSDV-TAPGSVDVWGDVMRRQPMP 184 (198)
T ss_dssp HHHTTSEEEEECCHHHH-HCCTTCCHHHHHHHTSSTT
T ss_pred HHHcCCEEEecCCHHHh-cCCCHHHHHHHHHHHcCCC
Confidence 99999999999999999 9999999999999999987
No 6
>1jli_A Interleukin 3, multi-CSF; hematopoietic growth factor, colony-stimulating factor, cytokine; NMR {Homo sapiens} SCOP: a.26.1.2
Probab=31.39 E-value=18 Score=28.95 Aligned_cols=13 Identities=46% Similarity=1.027 Sum_probs=11.2
Q ss_pred CchhHHHHHHHhh
Q 022172 69 DADWRSFRARLVA 81 (301)
Q Consensus 69 ~~dWR~FRA~Lv~ 81 (301)
++||-+||++|-.
T Consensus 88 ~~dl~DFr~KL~f 100 (112)
T 1jli_A 88 DGDWNEFRRKLTF 100 (112)
T ss_dssp SSCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHH
Confidence 4899999999964
No 7
>2l3o_A Interleukin 3; cytokine; NMR {Mus musculus}
Probab=17.46 E-value=72 Score=25.91 Aligned_cols=31 Identities=23% Similarity=0.343 Sum_probs=19.7
Q ss_pred cceecCCCCCCCCCCCCCCCCchhHHHHHHHhh
Q 022172 49 ITCCHLESSLPSDDHHKPLIDADWRSFRARLVA 81 (301)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~dWR~FRA~Lv~ 81 (301)
+-||---+- .|.-..|-..+||-+||+||-.
T Consensus 74 l~pcLPTat--p~~~~~pI~I~dl~DFrkKL~f 104 (127)
T 2l3o_A 74 LNACLPTSA--NDSALPGVFIRDLDDFRKKLRF 104 (127)
T ss_dssp HHHHSCCCC--CSSCCCCCCCSCHHHHHHHHHH
T ss_pred ccccCCCCC--CcccCCCeeeCcHHHHHHHHHH
Confidence 557742222 2333455556999999999976
No 8
>3edo_A Flavoprotein, putative Trp repressor binding protein; YP_193882.1, flavoprotein in complex with FMN, structural genomics; HET: MSE FMN; 1.20A {Lactobacillus acidophilus ncfm}
Probab=8.95 E-value=4.6e+02 Score=20.35 Aligned_cols=24 Identities=8% Similarity=0.072 Sum_probs=16.9
Q ss_pred CCcEEEEEeecCCChhHHHHHHHc
Q 022172 242 PEDFRFFDGCCGWEKEQLNEEIRA 265 (301)
Q Consensus 242 p~d~rfflGYaGW~~GQLE~EI~~ 265 (301)
....-.|.++.||+.|.=..+|++
T Consensus 106 ~~k~~~~~t~gg~~~g~~~~~l~~ 129 (151)
T 3edo_A 106 RGEVASFFTSAGTNHKAYVSHFNE 129 (151)
T ss_dssp CSEEEEEEECSSCCHHHHHHHHHH
T ss_pred CCEEEEEEEeCCCCCCcHHHHHHH
Confidence 356778889999997655555544
No 9
>2do5_A Splicing factor 3B subunit 2; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=8.14 E-value=1.7e+02 Score=20.28 Aligned_cols=16 Identities=19% Similarity=0.624 Sum_probs=14.4
Q ss_pred eecCCChhHHHHHHHc
Q 022172 250 GCCGWEKEQLNEEIRA 265 (301)
Q Consensus 250 GYaGW~~GQLE~EI~~ 265 (301)
||-.|....|+.-+++
T Consensus 7 ~ygaW~~~ELQaKLaE 22 (58)
T 2do5_A 7 GYGAWAAQELQAKLAE 22 (58)
T ss_dssp CSCSSCHHHHHHHHHH
T ss_pred CcccccCHHHHHHHHH
Confidence 8999999999988876
No 10
>3ndd_B Alpha-1-antitrypsin; serpin, hydrolase inhibitor; 1.50A {Homo sapiens} PDB: 1ezx_B 3ndf_B 7api_B* 8api_B* 9api_B* 2d26_B
Probab=7.19 E-value=4e+02 Score=16.32 Aligned_cols=24 Identities=17% Similarity=0.530 Sum_probs=17.9
Q ss_pred ccceEEEEEEeCCCCc---EEEEecCCC
Q 022172 138 FERTVILILSMEPMGP---SGIILNRPS 162 (301)
Q Consensus 138 F~RSVVLL~eH~e~Ga---~GlILNRP~ 162 (301)
+.|.-++++.|+..++ +|-|.| |+
T Consensus 8 ~drPFlf~I~~~~t~~iLF~G~v~~-P~ 34 (36)
T 3ndd_B 8 FNKPFVFLMIEQNTKSPLFMGKVVN-PT 34 (36)
T ss_dssp CCSCEEEEEEETTTCCEEEEEEESS-CC
T ss_pred eeCCEEEEEEECCCCcEEEEEEecC-CC
Confidence 5677788888888776 588877 54
Done!