Query 022174
Match_columns 301
No_of_seqs 125 out of 1210
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 15:08:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022174.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022174hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p8k_A Hydrolase, carbon-nitro 100.0 5.6E-56 1.9E-60 390.3 25.8 261 5-289 17-281 (281)
2 3hkx_A Amidase; alpha-beta-BET 100.0 3.4E-56 1.2E-60 392.1 19.4 265 4-292 16-283 (283)
3 3ivz_A Nitrilase; alpha-beta s 100.0 2.3E-55 7.9E-60 382.9 24.4 257 9-289 2-261 (262)
4 1f89_A 32.5 kDa protein YLR351 100.0 1E-53 3.6E-58 378.0 26.5 271 2-291 4-288 (291)
5 2w1v_A Nitrilase-2, nitrilase 100.0 1.7E-53 5.7E-58 373.9 26.4 263 8-290 3-271 (276)
6 2vhh_A CG3027-PA; hydrolase; 2 100.0 2.1E-53 7.3E-58 390.7 26.1 283 5-293 69-371 (405)
7 1uf5_A N-carbamyl-D-amino acid 100.0 5.8E-53 2E-57 375.3 25.9 279 7-293 2-302 (303)
8 2e11_A Hydrolase; dimethylarse 100.0 2E-53 6.7E-58 371.6 20.1 256 8-289 3-265 (266)
9 1ems_A Nitfhit, NIT-fragIle hi 100.0 4.7E-50 1.6E-54 373.8 18.5 271 4-293 9-290 (440)
10 2uxy_A Aliphatic amidase; nitr 100.0 1.2E-48 4.3E-53 352.0 26.3 255 7-289 11-278 (341)
11 2dyu_A Formamidase; AMIF, CEK, 100.0 1.6E-48 5.4E-53 350.6 25.9 253 7-282 12-275 (334)
12 4f4h_A Glutamine dependent NAD 100.0 3E-47 1E-51 362.4 25.6 241 6-269 4-267 (565)
13 3n05_A NH(3)-dependent NAD(+) 100.0 1.5E-47 5.2E-52 367.7 22.9 244 5-271 1-264 (590)
14 3ilv_A Glutamine-dependent NAD 100.0 1.7E-46 5.7E-51 362.3 23.3 264 8-291 5-290 (634)
15 3sdb_A Glutamine-dependent NAD 100.0 2.1E-45 7.2E-50 356.3 21.9 260 7-285 11-295 (680)
16 3hkx_A Amidase; alpha-beta-BET 85.1 2.2 7.4E-05 36.2 7.0 69 32-117 173-243 (283)
17 3ivz_A Nitrilase; alpha-beta s 80.4 3.8 0.00013 34.2 6.7 65 33-117 155-221 (262)
18 3p8k_A Hydrolase, carbon-nitro 78.9 5.1 0.00017 33.8 7.0 67 35-118 177-245 (281)
19 3obe_A Sugar phosphate isomera 78.9 8 0.00027 33.0 8.4 73 9-92 90-168 (305)
20 2dyu_A Formamidase; AMIF, CEK, 73.9 9.2 0.00032 33.2 7.4 69 32-117 174-244 (334)
21 2uxy_A Aliphatic amidase; nitr 73.4 9 0.00031 33.4 7.3 69 32-117 174-244 (341)
22 1f89_A 32.5 kDa protein YLR351 73.1 5.3 0.00018 33.8 5.6 68 34-117 179-249 (291)
23 3ngf_A AP endonuclease, family 72.8 21 0.0007 29.5 9.2 64 21-93 87-150 (269)
24 2w1v_A Nitrilase-2, nitrilase 68.1 8 0.00027 32.4 5.6 68 34-117 163-233 (276)
25 4f4h_A Glutamine dependent NAD 68.1 8 0.00027 36.4 6.0 71 33-118 178-250 (565)
26 2e11_A Hydrolase; dimethylarse 67.5 13 0.00043 30.9 6.7 61 40-117 165-228 (266)
27 3cqj_A L-ribulose-5-phosphate 66.6 19 0.00065 30.1 7.7 63 23-93 104-166 (295)
28 3kws_A Putative sugar isomeras 66.2 18 0.00061 30.1 7.5 80 8-93 77-165 (287)
29 3n05_A NH(3)-dependent NAD(+) 64.9 21 0.00073 33.6 8.3 70 34-118 174-245 (590)
30 3tva_A Xylose isomerase domain 64.8 17 0.00057 30.3 7.0 62 21-92 96-157 (290)
31 2j6v_A UV endonuclease, UVDE; 61.8 25 0.00086 30.0 7.6 81 8-93 22-122 (301)
32 3l23_A Sugar phosphate isomera 60.4 48 0.0016 27.9 9.2 60 22-92 103-164 (303)
33 2hk0_A D-psicose 3-epimerase; 59.1 35 0.0012 28.6 8.1 67 22-93 102-170 (309)
34 1k77_A EC1530, hypothetical pr 59.0 60 0.002 26.2 9.3 63 21-92 79-142 (260)
35 3ayv_A Putative uncharacterize 58.1 24 0.00082 28.7 6.7 62 22-92 71-135 (254)
36 3dx5_A Uncharacterized protein 57.9 49 0.0017 27.2 8.7 76 9-93 62-142 (286)
37 1i60_A IOLI protein; beta barr 57.8 24 0.00082 28.9 6.7 76 9-93 60-142 (278)
38 1uf5_A N-carbamyl-D-amino acid 56.4 37 0.0013 28.5 7.7 42 76-117 216-259 (303)
39 3qc0_A Sugar isomerase; TIM ba 56.4 25 0.00084 28.8 6.5 65 22-93 78-142 (275)
40 1ems_A Nitfhit, NIT-fragIle hi 55.6 15 0.0005 33.2 5.2 69 34-118 179-250 (440)
41 4h41_A Putative alpha-L-fucosi 55.6 35 0.0012 29.7 7.4 68 27-95 54-121 (340)
42 2vhh_A CG3027-PA; hydrolase; 2 55.1 15 0.00051 32.9 5.1 65 36-116 246-328 (405)
43 4fva_A 5'-tyrosyl-DNA phosphod 54.9 9 0.00031 30.8 3.4 39 8-49 13-53 (256)
44 3cny_A Inositol catabolism pro 54.1 46 0.0016 27.6 7.9 66 22-92 85-159 (301)
45 3rjt_A Lipolytic protein G-D-S 49.2 45 0.0015 25.7 6.7 61 22-91 112-172 (216)
46 3bdk_A D-mannonate dehydratase 48.8 45 0.0015 29.6 7.1 40 9-48 78-125 (386)
47 1nmo_A Hypothetical protein YB 48.6 36 0.0012 28.1 6.1 57 154-216 37-95 (247)
48 2q02_A Putative cytoplasmic pr 48.3 77 0.0026 25.6 8.3 72 9-92 65-138 (272)
49 4f1h_A Tyrosyl-DNA phosphodies 48.2 35 0.0012 26.6 6.0 40 7-49 2-43 (250)
50 2qw5_A Xylose isomerase-like T 47.9 64 0.0022 27.4 8.0 65 23-92 105-182 (335)
51 3tc3_A UV damage endonuclease; 46.5 77 0.0026 27.2 7.9 66 22-92 55-120 (310)
52 4hf7_A Putative acylhydrolase; 46.5 62 0.0021 25.2 7.2 66 21-91 99-164 (209)
53 3u0h_A Xylose isomerase domain 45.7 40 0.0014 27.6 6.1 76 9-93 61-141 (281)
54 2qul_A D-tagatose 3-epimerase; 44.1 35 0.0012 28.2 5.5 67 22-93 83-152 (290)
55 3tif_A Uncharacterized ABC tra 43.5 47 0.0016 26.9 6.1 70 33-117 156-225 (235)
56 1tz9_A Mannonate dehydratase; 42.8 1.6E+02 0.0056 25.3 10.1 38 9-46 69-114 (367)
57 3teb_A Endonuclease/exonucleas 41.9 45 0.0015 26.8 5.8 41 7-50 2-44 (266)
58 1vli_A Spore coat polysacchari 41.9 68 0.0023 28.4 7.1 72 21-94 38-121 (385)
59 3qxb_A Putative xylose isomera 39.4 37 0.0012 28.7 5.0 64 23-91 110-176 (316)
60 1g6h_A High-affinity branched- 39.1 1.1E+02 0.0039 24.9 7.9 69 32-116 163-232 (257)
61 2zds_A Putative DNA-binding pr 38.8 56 0.0019 27.6 6.1 65 23-92 107-178 (340)
62 3vni_A Xylose isomerase domain 38.6 93 0.0032 25.6 7.4 64 23-93 84-151 (294)
63 3hp4_A GDSL-esterase; psychrot 38.2 61 0.0021 24.4 5.7 69 10-91 68-141 (185)
64 4gz1_A Tyrosyl-DNA phosphodies 38.2 24 0.00082 28.1 3.5 40 7-49 8-49 (256)
65 2ihy_A ABC transporter, ATP-bi 36.9 1.3E+02 0.0043 25.1 7.9 71 32-117 171-243 (279)
66 4eo3_A Bacterioferritin comigr 35.9 32 0.0011 29.6 4.0 23 102-124 101-123 (322)
67 1iuq_A Glycerol-3-phosphate ac 34.5 31 0.001 30.4 3.6 64 21-89 204-267 (367)
68 3ilv_A Glutamine-dependent NAD 34.2 37 0.0013 32.3 4.5 70 34-118 176-247 (634)
69 2fyw_A Conserved hypothetical 33.7 1.3E+02 0.0044 25.0 7.3 58 154-216 40-99 (267)
70 2yz2_A Putative ABC transporte 33.3 1.6E+02 0.0053 24.3 7.8 69 32-116 148-217 (266)
71 3p6l_A Sugar phosphate isomera 32.8 83 0.0028 25.4 6.0 57 9-92 77-133 (262)
72 1xla_A D-xylose isomerase; iso 31.8 1.4E+02 0.0047 26.2 7.6 64 23-92 112-179 (394)
73 2pcj_A ABC transporter, lipopr 31.1 78 0.0027 25.3 5.4 41 74-116 178-218 (224)
74 3gfo_A Cobalt import ATP-bindi 31.0 1.8E+02 0.0062 24.1 7.9 71 32-117 153-224 (275)
75 3ixr_A Bacterioferritin comigr 30.6 1.7E+02 0.0059 22.0 8.0 26 22-47 67-92 (179)
76 3nxk_A Cytoplasmic L-asparagin 30.6 1.4E+02 0.0049 25.8 7.2 65 150-222 220-285 (334)
77 2gx8_A NIF3-related protein; s 30.4 1.2E+02 0.004 27.0 6.8 59 154-217 66-126 (397)
78 1ivn_A Thioesterase I; hydrola 30.1 1.7E+02 0.0059 21.9 7.6 69 10-91 64-137 (190)
79 3lmz_A Putative sugar isomeras 29.4 87 0.003 25.3 5.6 45 25-92 87-131 (257)
80 3drn_A Peroxiredoxin, bacterio 29.4 1.5E+02 0.005 21.7 6.5 25 22-46 45-69 (161)
81 2yyb_A Hypothetical protein TT 29.1 1.4E+02 0.0049 24.3 6.7 56 154-216 38-95 (242)
82 2wqp_A Polysialic acid capsule 29.0 76 0.0026 27.7 5.2 71 23-95 31-112 (349)
83 3gkn_A Bacterioferritin comigr 28.5 1.7E+02 0.0058 21.3 7.5 26 22-47 51-76 (163)
84 1o7j_A L-asparaginase; atomic 28.4 1.6E+02 0.0054 25.3 7.2 65 150-222 217-281 (327)
85 2wlt_A L-asparaginase; hydrola 28.3 1.6E+02 0.0055 25.4 7.2 65 150-222 218-282 (332)
86 3nvt_A 3-deoxy-D-arabino-heptu 28.1 1.6E+02 0.0055 26.0 7.2 62 25-96 154-215 (385)
87 2gs3_A PHGPX, GPX-4, phospholi 28.0 1.4E+02 0.0048 22.6 6.3 27 21-47 63-89 (185)
88 2vup_A Glutathione peroxidase- 28.0 1.5E+02 0.005 22.6 6.4 27 21-47 62-88 (190)
89 1vpl_A ABC transporter, ATP-bi 27.9 1.3E+02 0.0046 24.6 6.4 68 33-116 157-225 (256)
90 1wsa_A Asparaginase, asparagin 27.8 1.6E+02 0.0054 25.4 7.1 65 150-222 215-279 (330)
91 1vyb_A ORF2 contains A reverse 27.5 69 0.0024 25.1 4.5 42 6-51 5-46 (238)
92 2yxo_A Histidinol phosphatase; 27.5 1.6E+02 0.0053 23.8 6.9 59 28-94 17-79 (267)
93 3me7_A Putative uncharacterize 27.5 39 0.0013 25.6 2.9 43 77-122 104-146 (170)
94 3mpr_A Putative endonuclease/e 27.1 1.2E+02 0.0041 25.0 6.2 42 6-50 4-53 (298)
95 3tui_C Methionine import ATP-b 26.6 1.1E+02 0.0036 26.9 5.8 71 32-117 173-244 (366)
96 1nns_A L-asparaginase II; amid 26.3 1.7E+02 0.0059 25.1 7.0 65 150-222 211-275 (326)
97 3d31_A Sulfate/molybdate ABC t 24.9 1.5E+02 0.0053 25.6 6.5 70 33-117 138-208 (348)
98 3ewb_X 2-isopropylmalate synth 24.7 1.4E+02 0.0048 25.2 6.1 30 20-49 114-143 (293)
99 2nyd_A UPF0135 protein SA1388; 24.7 1.8E+02 0.0063 25.5 6.9 58 154-217 42-101 (370)
100 1ji0_A ABC transporter; ATP bi 24.4 1.2E+02 0.0041 24.5 5.5 68 33-116 150-218 (240)
101 4g1u_C Hemin import ATP-bindin 24.1 1.1E+02 0.0037 25.3 5.2 63 40-117 165-228 (266)
102 4h08_A Putative hydrolase; GDS 24.0 2.3E+02 0.008 21.3 7.7 18 74-91 140-157 (200)
103 1k7c_A Rhamnogalacturonan acet 24.0 2.6E+02 0.009 22.0 7.5 19 73-91 149-167 (233)
104 3hmu_A Aminotransferase, class 23.4 1.6E+02 0.0056 26.3 6.7 21 73-93 243-263 (472)
105 1z47_A CYSA, putative ABC-tran 23.3 1.5E+02 0.005 25.8 6.1 70 33-117 156-226 (355)
106 2obi_A PHGPX, GPX-4, phospholi 22.9 1.7E+02 0.0058 22.0 5.9 27 21-47 61-87 (183)
107 3p94_A GDSL-like lipase; serin 22.8 2.4E+02 0.0083 21.1 8.9 77 9-91 75-159 (204)
108 1b0u_A Histidine permease; ABC 22.7 1.3E+02 0.0045 24.6 5.5 68 33-116 164-232 (262)
109 1wdu_A TRAS1 ORF2P; four-layer 22.5 77 0.0026 25.3 3.9 37 11-51 20-56 (245)
110 3k28_A Glutamate-1-semialdehyd 22.2 1.5E+02 0.005 26.0 6.0 54 26-93 187-240 (429)
111 1oxx_K GLCV, glucose, ABC tran 22.1 1.5E+02 0.0053 25.6 6.0 70 33-117 151-221 (353)
112 2yv1_A Succinyl-COA ligase [AD 21.9 1.6E+02 0.0054 24.8 5.9 46 27-93 81-127 (294)
113 2x7v_A Probable endonuclease 4 21.9 1.9E+02 0.0064 23.4 6.3 26 22-47 84-109 (287)
114 2olj_A Amino acid ABC transpor 21.9 1.4E+02 0.0047 24.7 5.4 68 33-116 170-238 (263)
115 3tvk_A DGC, diguanylate cyclas 21.6 2.1E+02 0.0073 21.8 6.2 39 8-46 123-161 (179)
116 3can_A Pyruvate-formate lyase- 21.6 1.8E+02 0.0061 21.9 5.8 20 74-93 160-181 (182)
117 1ohv_A 4-aminobutyrate aminotr 21.5 2.5E+02 0.0086 25.0 7.5 55 25-93 241-298 (472)
118 3icl_A EAL/ggdef domain protei 21.4 1.8E+02 0.0061 21.3 5.7 41 8-48 120-162 (171)
119 2pjz_A Hypothetical protein ST 21.1 3.1E+02 0.011 22.4 7.5 103 32-158 138-242 (263)
120 3fq8_A Glutamate-1-semialdehyd 20.9 1.3E+02 0.0045 26.2 5.4 21 73-93 219-239 (427)
121 3g12_A Putative lactoylglutath 20.3 1.3E+02 0.0044 21.2 4.4 42 76-120 77-119 (128)
122 1g29_1 MALK, maltose transport 20.3 1.9E+02 0.0065 25.3 6.2 70 33-117 150-220 (372)
123 2yyz_A Sugar ABC transporter, 20.3 1.9E+02 0.0065 25.2 6.1 71 32-117 143-214 (359)
124 3tue_A Tryparedoxin peroxidase 20.1 1.1E+02 0.0038 24.6 4.3 32 80-117 130-161 (219)
125 2it1_A 362AA long hypothetical 20.0 1.7E+02 0.0059 25.5 5.8 70 33-117 144-214 (362)
No 1
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5.6e-56 Score=390.30 Aligned_cols=261 Identities=20% Similarity=0.357 Sum_probs=234.4
Q ss_pred CCcceEEEEEeccc-CCCHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHH
Q 022174 5 KRREVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELA 83 (301)
Q Consensus 5 ~~~~~kia~~Q~~~-~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a 83 (301)
+..+||||++|+++ .+|++.|++++.+++++|+++|+|||||||++++||...+ ..+.++... +++++.|+++|
T Consensus 17 ~~~~~kva~~Q~~~~~~d~~~Nl~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~~----~~~~a~~~~-~~~~~~l~~la 91 (281)
T 3p8k_A 17 RGSHMKVQIYQLPIVFGDSSKNETQITQWFEKNMNAEVDVVVLPEMWNNGYDLEH----LNEKADNNL-GQSFSFIKHLA 91 (281)
T ss_dssp TTSEEEEEEEECCCCTTCHHHHHHHHHHHHHHHCCTTCCEEECCSSTTTTTCGGG----HHHHSEETT-HHHHHHHHHHH
T ss_pred cCCCcEEEEEeccCCcCCHHHHHHHHHHHHHHHHhCCCcEEEcCCCccCCCChhH----HHHhhhccC-cHHHHHHHHHH
Confidence 34679999999999 7999999999999999999999999999999999997543 334444332 47899999999
Q ss_pred HHhCcEEeeeee-ecCCCeeeEEEEEEcCCCCeecccccccCCCCCCCCcceeecCCCCCc-eeEEe-CCceEEEEEecc
Q 022174 84 KELGVVMPVSFF-EEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGF-KVFQT-KFAKIGVAICWD 160 (301)
Q Consensus 84 ~~~~i~iv~G~~-~~~~~~~yN~~~~i~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~~~-~~~~~-~~~~ig~~IC~D 160 (301)
++++++|++|++ ++.++++||++++|+++|+++..|+|+||+++ |.|..+|.+|+. . .+|++ +++|+|++||||
T Consensus 92 ~~~~i~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~--f~E~~~f~~G~~-~~~v~~~~~~~~ig~~IC~D 168 (281)
T 3p8k_A 92 EKYKVDIVAGSVSNIRNNQIFNTAFSVNKSGQLINEYDKVHLVPM--LREHEFLTAGEY-VAEPFQLSDGTYVTQLICYD 168 (281)
T ss_dssp HHHTCEEEEEEEEEEETTEEEEEEEEECTTSCEEEEEECSCCCTT--TTGGGTCCCCSS-CCCCEECTTCCEEEEEEGGG
T ss_pred hhCCeEEEEeeeEEccCCcEEEEEEEEcCCCeEEEEEeeEECCCC--cCccccCcCCCC-CceeEEeCCCcEEEEEEecC
Confidence 999999999975 56688999999999999999999999999873 468999999986 6 89999 999999999999
Q ss_pred CCcHHHHHHHHHCCCcEEEeecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEEecCccccccccccCCcceeeecce
Q 022174 161 QWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKSQITFYGNS 240 (301)
Q Consensus 161 ~~~pe~~~~~~~~gadlil~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~~n~~G~~~~~~~~g~~~~~~~G~S 240 (301)
++||++++.++.+|||+|++|++|+. ....+|..+.++||+||++||++||++|... +..|.|.|
T Consensus 169 ~~fpe~~r~~~~~Gadli~~psa~~~-------~~~~~~~~~~~arA~en~~~vv~~n~~G~~~--------~~~~~G~S 233 (281)
T 3p8k_A 169 LRFPELLRYPARSGAKIAFYVAQWPM-------SRLQHWHSLLKARAIENNMFVIGTNSTGFDG--------NTEYAGHS 233 (281)
T ss_dssp GGCTHHHHHHHHTTCCEEEEEECCBG-------GGHHHHHHHHHHHHHHHTSEEEEEECEEECS--------SCEEECCC
T ss_pred CCCcHHHHHHHHCCCCEEEECCCCCC-------ccHHHHHHHHHHHHHHcCCEEEEEccCcCCC--------CcEEeeeE
Confidence 99999999999999999999999753 2368999999999999999999999999643 47899999
Q ss_pred EEECCCCccccccCCCCCcEEEEEechhhHHhhhhccCcccccChhhHH
Q 022174 241 FIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYK 289 (301)
Q Consensus 241 ~i~~p~G~~l~~~~~~~~~~~~~~ld~~~~~~~r~~~~~~~~~~~~~y~ 289 (301)
+|++|+|+++++ +.+++++++++||++.++..|..+|+++|+||++|+
T Consensus 234 ~ii~p~G~vl~~-~~~~e~~l~~~id~~~~~~~R~~~p~~~~rr~~lY~ 281 (281)
T 3p8k_A 234 IVINPNGDLVGE-LNESADILTVDLNLNEVEQQRENIPVFKSIKLDLYK 281 (281)
T ss_dssp EEECTTSCEEEE-CCSSCEEEEEEEETHHHHHHHHHSCGGGTCCTTTCC
T ss_pred EEECCCCCEEEe-cCCCCeEEEEEEcHHHHHHHHHhCcchhhcChhhcC
Confidence 999999999999 778899999999999999999999999999999984
No 2
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=100.00 E-value=3.4e-56 Score=392.08 Aligned_cols=265 Identities=23% Similarity=0.326 Sum_probs=224.7
Q ss_pred CCCcceEEEEEeccc-CCCHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHH-hhcCCCCCChhHHHHHH
Q 022174 4 GKRREVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFF-QRAKPYKDHPTILKMQE 81 (301)
Q Consensus 4 ~~~~~~kia~~Q~~~-~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 81 (301)
.+.++||||++|+++ .+|++.|++++.+++++|+++|+|||||||++++||...+ +. +.+++. .+++++.|++
T Consensus 16 ~~~~~~rva~~Q~~~~~~d~~~N~~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~d----~~~~~a~~~-~~~~~~~l~~ 90 (283)
T 3hkx_A 16 IRGSHMRIALMQHTARPLDPQHNLDLIDDAAARASEQGAQLLLTPELFGFGYVPSQ----ICAQVSAEQ-VDAARSRLRG 90 (283)
T ss_dssp CTTEEEEEEEEEBCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTGGGCSCHHH----HHHHCCHHH-HHHHHHHHHH
T ss_pred ecCCccEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCChHH----HHHHhcccc-CCHHHHHHHH
Confidence 345679999999999 6799999999999999999999999999999999997542 11 222211 1368899999
Q ss_pred HHHHhCcEEeeeeeecCC-CeeeEEEEEEcCCCCeecccccccCCCCCCCCcceeecCCCCCceeEEeCCceEEEEEecc
Q 022174 82 LAKELGVVMPVSFFEEAN-NAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWD 160 (301)
Q Consensus 82 ~a~~~~i~iv~G~~~~~~-~~~yN~~~~i~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~~~~~~~~~~~~ig~~IC~D 160 (301)
+|++++++|++|++++.+ +++||++++|+++|+++..|+|+||++. .|..+|.+|+..+.+|+++++|||++||||
T Consensus 91 ~a~~~~i~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~---~E~~~f~~G~~~~~v~~~~~~~ig~~IC~D 167 (283)
T 3hkx_A 91 IARDRGIALVWSLPGPEGPEQRGITAELADEHGEVLASYQKVQLYGP---EEKAAFVPGEQPPPVLSWGGRQLSLLVCYD 167 (283)
T ss_dssp HHHHTTSEEEECCBCSSCTTTCCBEEEEECTTSCEEEEEECSSCCHH---HHHHHSCCCCSCCCEEEETTEEEEECCGGG
T ss_pred HHHHhCCEEEEEEEEEcCCCCEEEEEEEEcCCCcEEEEEccccCCCc---CchhhccCCCCCceEEEECCEEEEEEEecC
Confidence 999999999999998775 7899999999999999999999999652 488899999865679999999999999999
Q ss_pred CCcHHHHHHHHHCCCcEEEeecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEEecCccccccccccCCcceeeecce
Q 022174 161 QWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKSQITFYGNS 240 (301)
Q Consensus 161 ~~~pe~~~~~~~~gadlil~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~~n~~G~~~~~~~~g~~~~~~~G~S 240 (301)
++||++++.++.+|||+|++|++|+.. ...+|..+.++||+||++||++||++|... +..+.|.|
T Consensus 168 ~~fpe~~r~l~~~Ga~li~~ps~~~~~-------~~~~~~~~~~~rA~en~~~vv~~n~~G~~~--------~~~~~G~S 232 (283)
T 3hkx_A 168 VEFPEMVRAAAARGAQLVLVPTALAGD-------ETSVPGILLPARAVENGITLAYANHCGPEG--------GLVFDGGS 232 (283)
T ss_dssp GGSHHHHHHHHHTTCSEEEEECCCBSC-------CTHHHHTHHHHHHHHHTCEEEEECBEEEET--------TEEEECCC
T ss_pred cCCHHHHHHHHHCCCCEEEECCCCCCc-------ccHHHHHHHHHHHHHhCCEEEEEccccCCC--------CeEEeeEE
Confidence 999999999999999999999997531 236899999999999999999999999643 47899999
Q ss_pred EEECCCCccccccCCCCCcEEEEEechhhHHhhhhccCcccccChhhHHHHH
Q 022174 241 FIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYKVLL 292 (301)
Q Consensus 241 ~i~~p~G~~l~~~~~~~~~~~~~~ld~~~~~~~r~~~~~~~~~~~~~y~~~~ 292 (301)
+|++|+|+++++++ +++++++++||++.++..|..+|+++|+||++|+.++
T Consensus 233 ~ii~p~G~vl~~~~-~~e~~l~a~id~~~~~~~R~~~~~~~~rr~~ly~~l~ 283 (283)
T 3hkx_A 233 VVVGPAGQPLGELG-VEPGLLVVDLPDQSQDAGSDSADYLQDRRAELHRNWL 283 (283)
T ss_dssp EEECTTSCEEEECC-SSCEEEEEEEEC----------CHHHHSCHHHHHHHC
T ss_pred EEECCCCCEEEecC-CCCeEEEEEECHHHHHHHHHhCChhHhcCHhhhhhcC
Confidence 99999999999998 7899999999999999999999999999999998763
No 3
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=100.00 E-value=2.3e-55 Score=382.89 Aligned_cols=257 Identities=35% Similarity=0.597 Sum_probs=233.2
Q ss_pred eEEEEEeccc-CCCHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhC
Q 022174 9 VVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELG 87 (301)
Q Consensus 9 ~kia~~Q~~~-~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~ 87 (301)
||||++|+++ .+|++.|++++.+++++|+++|+|||||||++++||...+. .++.+.+++...+++++.|+++|++++
T Consensus 2 ~rva~~Q~~~~~~d~~~N~~~~~~~i~~A~~~gadlvvfPE~~~~gy~~~~~-~~~~~~a~~~~~~~~~~~l~~~a~~~~ 80 (262)
T 3ivz_A 2 VKVAYVQMNPQILEPDKNYSKAEKLIKEASKQGAQLVVLPELFDTGYNFETR-EEVFEIAQKIPEGETTTFLMDVARDTG 80 (262)
T ss_dssp CEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCSCH-HHHHHHCBCTTTSHHHHHHHHHHHHHC
T ss_pred eEEEEEeccCCCCCHHHHHHHHHHHHHHHHHCCCCEEEeCCCcccCCCCCCH-HHHHHhcCccCCCHHHHHHHHHHHHcC
Confidence 8999999999 69999999999999999999999999999999999976542 234555665445689999999999999
Q ss_pred cEEeeeeeecCCCeeeEEEEEEcCCCCeecccccccCCCCCCCCcceeecCCCCCceeEEeCCceEEEEEeccCCcHHHH
Q 022174 88 VVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAA 167 (301)
Q Consensus 88 i~iv~G~~~~~~~~~yN~~~~i~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~~~~~~~~~~~~ig~~IC~D~~~pe~~ 167 (301)
++|++|++++.++++||++++++++| ++..|+|+||+. .|..+|++|+..+.+|+++++|+|++||||++||+++
T Consensus 81 ~~iv~G~~~~~~~~~yNs~~~i~~~G-~~~~y~K~hL~~----~E~~~f~~G~~~~~v~~~~~~~ig~~IC~D~~fpe~~ 155 (262)
T 3ivz_A 81 VYIVAGTAEKDGDVLYNSAVVVGPRG-FIGKYRKIHLFY----REKFFFEPGDLGFRVFDLGFMKVGVMICFDWFFPESA 155 (262)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEETTE-EEEEEECSSCCG----GGGGTCBCCCSCSCEEECSSCEEEECCGGGGGSHHHH
T ss_pred cEEEEeEEEeeCCcEEEEEEEEcCCe-eEEEEeecccCC----chhceEeCCCCCceEEEECCEEEEEEEecCCCchHHH
Confidence 99999999988899999999999999 999999999953 6889999998448899999999999999999999999
Q ss_pred HHHHHCCCcEEEeecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEEecCccccccccccCCcceeeecceEEECCCC
Q 022174 168 RAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKSQITFYGNSFIAGPTG 247 (301)
Q Consensus 168 ~~~~~~gadlil~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~~n~~G~~~~~~~~g~~~~~~~G~S~i~~p~G 247 (301)
+.++.+|||+|++|++|+. . +|..+.++||+||++||++||++|... +..+.|.|+|++|+|
T Consensus 156 r~~~~~ga~li~~ps~~~~--------~--~~~~~~~~rA~en~~~vv~~n~~G~~~--------~~~~~G~S~ii~p~G 217 (262)
T 3ivz_A 156 RTLALKGADVIAHPANLVM--------P--YAPRAMPIRALENKVYTVTADRVGEER--------GLKFIGKSLIASPKA 217 (262)
T ss_dssp HHHHHTTCSEEEEEECCCS--------S--CHHHHHHHHHHHHTCEEEEEECCSEET--------TEECCCCCEEECTTS
T ss_pred HHHHHCCCCEEEEcCCCCc--------h--HHHHHHHHHHHhcCcEEEEECCCCcCC--------CceEeeeEEEECCCC
Confidence 9999999999999999753 1 588899999999999999999999653 478999999999999
Q ss_pred ccccccCCCCCcEEEEEechhhHHhhhhc--cCcccccChhhHH
Q 022174 248 EIVAAADDKEEAVLVAQFDLDKLKSKRSS--WGVFRDRRPELYK 289 (301)
Q Consensus 248 ~~l~~~~~~~~~~~~~~ld~~~~~~~r~~--~~~~~~~~~~~y~ 289 (301)
+++++++.+++++++++||++.++..|.. +|+++|+||++|.
T Consensus 218 ~il~~~~~~~~~~~~~~id~~~~~~~R~~~~~p~l~~rr~~lY~ 261 (262)
T 3ivz_A 218 EVLSMASETEEEVGVAEIDLSLVRNKRINDLNDIFKDRREEYYF 261 (262)
T ss_dssp CEEEECCSSCCEEEEEECCHHHHHCCEEETTEEHHHHCCGGGSC
T ss_pred CEeecCCCCCceEEEEEEcHHHHHHHhhcccCchhhhcCHhhhC
Confidence 99999998888899999999999999987 8999999999995
No 4
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=100.00 E-value=1e-53 Score=378.00 Aligned_cols=271 Identities=25% Similarity=0.420 Sum_probs=229.1
Q ss_pred CCCCCcceEEEEEecc-cCCCHHHHHHHHHHHHHHH--HhCCCcEEEecccccCcccCCccchHHHhhcCCC-CC--Chh
Q 022174 2 EKGKRREVVVSALQFA-CTDDVSTNLATAERLVRAA--HGKGANIILIQELFEGYYFCQAQREDFFQRAKPY-KD--HPT 75 (301)
Q Consensus 2 ~~~~~~~~kia~~Q~~-~~~~~~~n~~~~~~~i~~A--~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~-~~--~~~ 75 (301)
++.|.++||||++|++ ..++++.|++++.+++++| .++++|||||||++++||... ++.+.++.. .. +++
T Consensus 4 ~~~m~~~~~va~vQ~~~~~~d~~~n~~~~~~~i~~a~~~~~gadlvv~PE~~~~g~~~~----~~~~~~~~~~~~~~~~~ 79 (291)
T 1f89_A 4 SKILSQKIKVALVQLSGSSPDKMANLQRAATFIERAMKEQPDTKLVVLPECFNSPYSTD----QFRKYSEVINPKEPSTS 79 (291)
T ss_dssp SSSBSSCEEEEEEECCCCCSCHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTSCSCHH----HHHHHTTBCCSSSCCHH
T ss_pred cccccccceEEEEeccCCcCCHHHHHHHHHHHHHHHhhccCCCeEEEcCCCcccCCChH----HHHHHhhhhccCCCChH
Confidence 4567778999999999 4899999999999999999 889999999999999998532 233444443 22 578
Q ss_pred HHHHHHHHHHhCcEEeeee-eecCC--CeeeEEEEEEcCCCCeecccccccCCC-----CCCCCcceeecCCCCCceeEE
Q 022174 76 ILKMQELAKELGVVMPVSF-FEEAN--NAHYNSIAIIDADGSDLGLYRKSHIPD-----GPGYQEKFYFNPGDTGFKVFQ 147 (301)
Q Consensus 76 ~~~l~~~a~~~~i~iv~G~-~~~~~--~~~yN~~~~i~~~G~i~~~~~K~~l~~-----~~~~~e~~~~~~G~~~~~~~~ 147 (301)
++.|+++|++++++|++|. .++.+ +++||++++|+++|+++..|+|+||+. ...+.|..+|.+|+. +.+|+
T Consensus 80 ~~~l~~~a~~~~~~iv~G~~~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hLf~e~~P~~~~~~E~~~f~~G~~-~~v~~ 158 (291)
T 1f89_A 80 VQFLSNLANKFKIILVGGTIPELDPKTDKIYNTSIIFNEDGKLIDKHRKVHLFDVDIPNGISFHESETLSPGEK-STTID 158 (291)
T ss_dssp HHHHHHHHHHSSCEEECCCEEEECTTTCCEEEEEEEECTTSCEEEEEECCCCC----------HHHHSCCCCCC-CEEEE
T ss_pred HHHHHHHHHHcCcEEEeceeecccCCCCceEEEEEEECCCCcEEeEEeeeccCCCccCccccccccccccCCCC-CceEe
Confidence 9999999999999999995 56555 789999999999999999999999943 223468889999985 78999
Q ss_pred eCCceEEEEEeccCCcHHHHHHHHHCCCcEEEeecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEEecCcccccccc
Q 022174 148 TKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIET 227 (301)
Q Consensus 148 ~~~~~ig~~IC~D~~~pe~~~~~~~~gadlil~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~~n~~G~~~~~~ 227 (301)
++++|+|++||||++||++++.++++|||+|++|++|+. .....+|..+.++||+||++||+.||++|...
T Consensus 159 ~~~~~ig~~ICyD~~fpe~~r~l~~~Ga~ll~~ps~~~~------~~~~~~~~~~~~~rA~en~~~vv~~n~~G~~~--- 229 (291)
T 1f89_A 159 TKYGKFGVGICYDMRFPELAMLSARKGAFAMIYPSAFNT------VTGPLHWHLLARSRAVDNQVYVMLCSPARNLQ--- 229 (291)
T ss_dssp ETTEEEEECCGGGGGCHHHHHHHHHTTEEEEEEECCCBT------THHHHHHHHHHHHHHHHHTSEEEEECCCCCTT---
T ss_pred cCCeeEEEEEecccCchHHHHHHHhhCCCEEEECCcCCC------CCcHHHHHHHHHHHHHHcCCEEEEecCccCCC---
Confidence 999999999999999999999999999999999998653 12357899999999999999999999999532
Q ss_pred ccCCcceeeecceEEECCCCccccccCCCCCcEEEEEechhhHHhhhhccCcccccChhhHHHH
Q 022174 228 EHGKSQITFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYKVL 291 (301)
Q Consensus 228 ~~g~~~~~~~G~S~i~~p~G~~l~~~~~~~~~~~~~~ld~~~~~~~r~~~~~~~~~~~~~y~~~ 291 (301)
+...|.|.|+|++|+|+++++++. ++++++++||++.++..|..+|+++|+|+++|+.+
T Consensus 230 ----~~~~~~G~S~ii~p~G~vl~~~~~-~e~~l~~~id~~~~~~~R~~~~~~~~~r~~~y~~~ 288 (291)
T 1f89_A 230 ----SSYHAYGHSIVVDPRGKIVAEAGE-GEEIIYAELDPEVIESFRQAVPLTKQRRFDVYSDV 288 (291)
T ss_dssp ----SSSCBCCCCEEECTTSCEEEECCS-SSEEEEEEECHHHHHHHHHHSCCCCCCCC------
T ss_pred ----CCCeeeeEEEEECCCCCEEEecCC-CCeEEEEEECHHHHHHHHHhCChhHhCChhhhhhh
Confidence 247899999999999999999876 79999999999999999999999999999999865
No 5
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=100.00 E-value=1.7e-53 Score=373.94 Aligned_cols=263 Identities=30% Similarity=0.469 Sum_probs=231.5
Q ss_pred ceEEEEEecccCCCHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhC
Q 022174 8 EVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELG 87 (301)
Q Consensus 8 ~~kia~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~ 87 (301)
+||||++|+++.++.+.|++++.+++++|.++++|||||||++++||...+ ....+++.. +++++.|+++|++++
T Consensus 3 ~~~va~vQ~~~~~d~~~n~~~~~~~i~~a~~~gadlvv~PE~~~~gy~~~~----~~~~~~~~~-~~~~~~l~~~a~~~~ 77 (276)
T 2w1v_A 3 TFRLALIQLQVSSIKSDNLTRACSLVREAAKQGANIVSLPECFNSPYGTTY----FPDYAEKIP-GESTQKLSEVAKESS 77 (276)
T ss_dssp EEEEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCCSTTT----HHHHCBCSS-SHHHHHHHHHHHHHT
T ss_pred ccEEEEEeccccCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCCHHH----HHHHhccCC-CHHHHHHHHHHHHcC
Confidence 699999999998999999999999999999999999999999999986543 233344433 488999999999999
Q ss_pred cEEeeee-eecCCCeeeEEEEEEcCCCCeecccccccCC----CCC-CCCcceeecCCCCCceeEEeCCceEEEEEeccC
Q 022174 88 VVMPVSF-FEEANNAHYNSIAIIDADGSDLGLYRKSHIP----DGP-GYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQ 161 (301)
Q Consensus 88 i~iv~G~-~~~~~~~~yN~~~~i~~~G~i~~~~~K~~l~----~~~-~~~e~~~~~~G~~~~~~~~~~~~~ig~~IC~D~ 161 (301)
++|++|. .++.++++||++++++++|+++..|+|+||+ |++ .+.|..+|.+|+. +.+|+++++|+|++||||+
T Consensus 78 ~~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~~vP~~e~~~E~~~f~~G~~-~~v~~~~~~~ig~~ICyD~ 156 (276)
T 2w1v_A 78 IYLIGGSIPEEDAGKLYNTCSVFGPDGSLLVKHRKIHLFDIDVPGKITFQESKTLSPGDS-FSTFDTPYCKVGLGICYDM 156 (276)
T ss_dssp SEEECCCEEEEETTEEEEEEEEECTTSCEEEEEECSSCCEEEETTTEEEEGGGTCCCCCC-CCEEECSSCEEEECCGGGG
T ss_pred eEEEecceeecCCCcEEEEEEEECCCCcEEEEEecccccCcccCccccccccccccCCCC-ceeEEeCCceEEEEEEecc
Confidence 9999995 4555789999999999999999999999993 332 3468889999985 7899999999999999999
Q ss_pred CcHHHHHHHHHCCCcEEEeecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEEecCccccccccccCCcceeeecceE
Q 022174 162 WFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKSQITFYGNSF 241 (301)
Q Consensus 162 ~~pe~~~~~~~~gadlil~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~~n~~G~~~~~~~~g~~~~~~~G~S~ 241 (301)
+||++++.++++|||+|++|++|+. .....+|..+.++||+||++||+.||++|... ++..+.|.|+
T Consensus 157 ~fpe~~r~~~~~ga~ll~~ps~~~~------~~~~~~~~~~~~~rA~en~~~vv~~n~~G~~~-------~~~~~~G~S~ 223 (276)
T 2w1v_A 157 RFAELAQIYAQRGCQLLVYPGAFNL------TTGPAHWELLQRARAVDNQVYVATASPARDDK-------ASYVAWGHST 223 (276)
T ss_dssp GCHHHHHHHHHTTEEEEEEECCCCT------THHHHHHHHHHHHHHHHHTCEEEEECCCCCTT-------SSSCCCCCCE
T ss_pred ccHHHHHHHHHcCCCEEEECCcCCC------cCCHHHHHHHHHHHHHHcCcEEEEecccccCC-------CCceeeeEeE
Confidence 9999999999999999999998753 12357899999999999999999999999643 1368899999
Q ss_pred EECCCCccccccCCCCCcEEEEEechhhHHhhhhccCcccccChhhHHH
Q 022174 242 IAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYKV 290 (301)
Q Consensus 242 i~~p~G~~l~~~~~~~~~~~~~~ld~~~~~~~r~~~~~~~~~~~~~y~~ 290 (301)
|++|+|+++++++. ++++++++||++.++..|..+|+++|+|+++|++
T Consensus 224 ii~p~G~v~~~~~~-~e~~l~~~id~~~~~~~R~~~~~~~~~r~~~y~~ 271 (276)
T 2w1v_A 224 VVDPWGQVLTKAGT-EETILYSDIDLKKLAEIRQQIPILKQKRADLYTV 271 (276)
T ss_dssp EECTTSCEEEECCS-SSEEEEEEEEHHHHHHHHHHSCGGGSCCTTTEEE
T ss_pred EECCCCCEeEEcCC-CCeEEEEEEcHHHHHHHHHhCChhHhCCHHHhhc
Confidence 99999999999987 8999999999999999999999999999999863
No 6
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=100.00 E-value=2.1e-53 Score=390.68 Aligned_cols=283 Identities=29% Similarity=0.456 Sum_probs=228.9
Q ss_pred CCcceEEEEEecccC--------CCHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCc-cchHHHhhcCCCCCChh
Q 022174 5 KRREVVVSALQFACT--------DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQA-QREDFFQRAKPYKDHPT 75 (301)
Q Consensus 5 ~~~~~kia~~Q~~~~--------~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~-~~~~~~~~~~~~~~~~~ 75 (301)
+.++||||++|+++. ++.+.|++++.+++++|.++|+|||||||++++||.... ....+.+.+++...+++
T Consensus 69 ~~~~~rVAlvQ~~i~~~~~~~~~~d~~~nl~~~~~li~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~ae~~~~~~~ 148 (405)
T 2vhh_A 69 KRRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWTMPFAFCTREKFPWCEFAEEAENGPT 148 (405)
T ss_dssp CCCEEEEEEEECCCCSCSSSCHHHHHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCSCC---------CCCBCTTTSHH
T ss_pred CCCCCEEEEEeccccccccccccccHHHHHHHHHHHHHHHHHCCCCEEEcCCcccccccccccchhhHHHHHhhccCCHH
Confidence 445799999999972 468999999999999999999999999999999985321 11123344444434588
Q ss_pred HHHHHHHHHHhCcEEeeeeeecC---CCeeeEEEEEEcCCCCeecccccccCCCCCCCCcceeecCCCCCceeEEeCCce
Q 022174 76 ILKMQELAKELGVVMPVSFFEEA---NNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAK 152 (301)
Q Consensus 76 ~~~l~~~a~~~~i~iv~G~~~~~---~~~~yN~~~~i~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~~~~~~~~~~~~ 152 (301)
++.|+++|++++++|++|++++. ++++||++++|+++|++++.|+|+||++++.|.|..+|.+|+..+.+|+++++|
T Consensus 149 ~~~l~~lA~~~~i~Iv~G~~e~~~~~~~~~yNsa~vi~p~G~i~~~YrK~hL~~~g~f~E~~~f~~G~~~~~vf~~~~~r 228 (405)
T 2vhh_A 149 TKMLAELAKAYNMVIIHSILERDMEHGETIWNTAVVISNSGRYLGKHRKNHIPRVGDFNESTYYMEGNTGHPVFETEFGK 228 (405)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEETTTTTEEEEEEEEECTTSCEEEEEECSCCCC----------CCCCSCCCEEEETTEE
T ss_pred HHHHHHHHHHCCEEEEEeceecccCCCCcEEEEEEEECCCCeEEEEEecccCCCCCCcCcccceeCCCCCCeeEEECCEE
Confidence 99999999999999999998865 578999999999999999999999999988888999999998557899999999
Q ss_pred EEEEEeccCCcHHHHHHHHHCCCcEEEeecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEEecCccccccc----cc
Q 022174 153 IGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIE----TE 228 (301)
Q Consensus 153 ig~~IC~D~~~pe~~~~~~~~gadlil~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~~n~~G~~~~~----~~ 228 (301)
||++||||++||+.++.++++|||+|++|++|.. .....+|..++++||+||++||++||++|..... ..
T Consensus 229 iG~~ICyD~~fPe~~r~la~~GAdill~psa~~~------~~~~~~w~~l~raRAiEn~~~Vv~aN~vG~~~~~~~~~~~ 302 (405)
T 2vhh_A 229 LAVNICYGRHHPQNWMMFGLNGAEIVFNPSATIG------RLSEPLWSIEARNAAIANSYFTVPINRVGTEQFPNEYTSG 302 (405)
T ss_dssp EEECCGGGGGCHHHHHHHHHTTCSEEEEEECCBC------TTTHHHHHHHHHHHHHHHTSEEEEEECEECCCCC------
T ss_pred EEEEEeccccChHHHHHHHHcCCCEEEEcccCCC------CCCHHHHHHHHHHHHHHcCceEEEeccccccccccccccc
Confidence 9999999999999999999999999999999743 1246789999999999999999999999965210 00
Q ss_pred cCC----cceeeecceEEECCCCccccccCCCCCcEEEEEechhhHHhhhhccCcccccChhhHHHHHh
Q 022174 229 HGK----SQITFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYKVLLT 293 (301)
Q Consensus 229 ~g~----~~~~~~G~S~i~~p~G~~l~~~~~~~~~~~~~~ld~~~~~~~r~~~~~~~~~~~~~y~~~~~ 293 (301)
+|. +...|+|.|+|++|+|+++++++.+++++++++||++.++..|..+++++++|+++|..++.
T Consensus 303 ~g~~~~~~~~~f~G~S~IidP~G~vla~~~~~~e~il~aeiDl~~~~~~R~~~p~~~~rR~~lY~~~~~ 371 (405)
T 2vhh_A 303 DGNKAHKEFGPFYGSSYVAAPDGSRTPSLSRDKDGLLVVELDLNLCRQVKDFWGFRMTQRVPLYAESFK 371 (405)
T ss_dssp -----------EECCCCCBCTTSCBCCCCCSSSCEEEEEEEETTHHHHHHHHHCTTTTCCHHHHHHHHH
T ss_pred cCccccccCceeccccceECCCCCEeeccCCCCCeEEEEEECHHHHHHHHHhCCchhhcCHHHHHHHHH
Confidence 010 12578999999999999999998788999999999999999999999999999999998877
No 7
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=100.00 E-value=5.8e-53 Score=375.27 Aligned_cols=279 Identities=28% Similarity=0.395 Sum_probs=233.6
Q ss_pred cceEEEEEeccc-C--CCHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCcc--c-hHHHhhcCCCCCChhHHHHH
Q 022174 7 REVVVSALQFAC-T--DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ--R-EDFFQRAKPYKDHPTILKMQ 80 (301)
Q Consensus 7 ~~~kia~~Q~~~-~--~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~--~-~~~~~~~~~~~~~~~~~~l~ 80 (301)
++||||++|+++ . ++++.|++++.+++++|+++++|||||||++++||...+. . .+.....+....+++++.|+
T Consensus 2 ~~~~va~~Q~~~~~~~~d~~~n~~~~~~~i~~a~~~gadlvv~PE~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 81 (303)
T 1uf5_A 2 RQMILAVGQQGPIARAETREQVVVRLLDMLTKAASRGANFIVFPELALTTFFPRWHFTDEAELDSFYETEMPGPVVRPLF 81 (303)
T ss_dssp CEEEEEEEEBCCCCTTCCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCCGGGSCCCCHHHHHTTSBSSSSCTTTHHHH
T ss_pred ccEEEEEEEecCcccccCHHHHHHHHHHHHHHHHhcCCCEEEeccccccCCCccccccchhhhHHHHhhcCCCHHHHHHH
Confidence 579999999998 5 7999999999999999999999999999999999865431 1 11111111111347889999
Q ss_pred HHHHHhCcEEeeeeeecC-CC---eeeEEEEEEcCCCCeecccccccCCCCCC------C--CcceeecCCCCCceeEEe
Q 022174 81 ELAKELGVVMPVSFFEEA-NN---AHYNSIAIIDADGSDLGLYRKSHIPDGPG------Y--QEKFYFNPGDTGFKVFQT 148 (301)
Q Consensus 81 ~~a~~~~i~iv~G~~~~~-~~---~~yN~~~~i~~~G~i~~~~~K~~l~~~~~------~--~e~~~~~~G~~~~~~~~~ 148 (301)
++|++++++|++|++++. ++ ++||++++++++|+++..|+|+||+.+++ | .|..+|.+|+..+.+|++
T Consensus 82 ~~a~~~~~~iv~G~~~~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~~e~~p~~~~~~~E~~~f~~G~~~~~v~~~ 161 (303)
T 1uf5_A 82 EKAAELGIGFNLGYAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRYFEPGDLGFPVYDV 161 (303)
T ss_dssp HHHHHHTCEEEEEEEEEEEETTEEEEEEEEEEECTTSCEEEEEECCCCCSCSSCCTTCSSCCCHHHHCCCCSSCSCEEEE
T ss_pred HHHHHhCeEEEEeeeEecCCCCCcceeeEEEEECCCCCEeeeEeeeecCCcccccccccccccchhhccCCCCCCceEec
Confidence 999999999999998764 44 79999999999999999999999963332 3 588899999834789999
Q ss_pred CCceEEEEEeccCCcHHHHHHHHHCCCcEEEeecccCCCCCCCC--C-CcHHHHHHHhhhhHhcCcceEEEecCcccccc
Q 022174 149 KFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDG--L-DSRDHWRRVMQGHAGANVVPLVASNRIGKEII 225 (301)
Q Consensus 149 ~~~~ig~~IC~D~~~pe~~~~~~~~gadlil~p~~~~~~~~~~~--~-~~~~~~~~~~~~~A~e~~~~vv~~n~~G~~~~ 225 (301)
+++|+|++||||++||++++.++++|||+|++|++++..+.... . ....+|..+.++||+||++||++||++|...
T Consensus 162 ~~~~ig~~ICyD~~fpe~~r~l~~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~G~~~- 240 (303)
T 1uf5_A 162 DAAKMGMFIANDRRWPEAWRVMGLRGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNGAWSAAAGKAGMEE- 240 (303)
T ss_dssp TTEEEEECCGGGGGCHHHHHHHHHTTCSEEEEEECCBSCCTTCGGGGGGHHHHHHHHHHHHHHHHTCEEEEEEBCEEET-
T ss_pred CCceEEEEEecCccCHHHHHHHHHCCCCEEEEecCCccccccccCCccccHHHHHHHHHhhhhcCCcEEEEECcccccC-
Confidence 99999999999999999999999999999988777544322110 0 0457899999999999999999999999653
Q ss_pred ccccCCcceeeecceEEECCCCccccccCCCCCcEEEEEechhhHHhhhhc-cCcccccChhhHHHHHh
Q 022174 226 ETEHGKSQITFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSS-WGVFRDRRPELYKVLLT 293 (301)
Q Consensus 226 ~~~~g~~~~~~~G~S~i~~p~G~~l~~~~~~~~~~~~~~ld~~~~~~~r~~-~~~~~~~~~~~y~~~~~ 293 (301)
...+.|.|+|++|+|+++++++.+++++++++||++.++..|.. +++++|+|+++|..+++
T Consensus 241 -------~~~~~G~S~ii~p~G~vl~~~~~~~~~~l~~~id~~~~~~~R~~~~~~~~~rr~~~y~~~~~ 302 (303)
T 1uf5_A 241 -------NCMLLGHSCIVAPTGEIVALTTTLEDEVITAAVDLDRCRELREHIFNFKQHRQPQHYGLIAE 302 (303)
T ss_dssp -------TEEECCCCEEECTTSCEEEECCSSSSEEEEEEEEGGGGHHHHTTTTCHHHHCCGGGCGGGGC
T ss_pred -------CccccceeEEECCCCCEeccCCCCCCcEEEEEEcHHHHHHHHhhcccchhccCHHHHHHhhc
Confidence 36899999999999999999988788999999999999999999 99999999999987654
No 8
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=100.00 E-value=2e-53 Score=371.56 Aligned_cols=256 Identities=19% Similarity=0.274 Sum_probs=227.1
Q ss_pred ceEEEEEeccc-CCCHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHh
Q 022174 8 EVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKEL 86 (301)
Q Consensus 8 ~~kia~~Q~~~-~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~ 86 (301)
+||||++|+++ .++++.|++++.+++++| ++|+|||||||++++||.... ...+++. .+++++.|+++|+++
T Consensus 3 ~~kva~~Q~~~~~~d~~~n~~~~~~~i~~a-~~gadlvv~PE~~~~gy~~~~-----~~~a~~~-~~~~~~~l~~~a~~~ 75 (266)
T 2e11_A 3 DLRISLVQGSTRWHDPAGNRDYYGALLEPL-AGQSDLVILPETFTSGFSNEA-----IDKAEDM-DGPTVAWIRTQAARL 75 (266)
T ss_dssp CEEEEEEECCCCTTCHHHHHHHHHHHHGGG-TTTCSEEECCTTTTTCSCSGG-----GGGCEET-TSHHHHHHHHHHHHH
T ss_pred ccEEEEEeCCCCcCCHHHHHHHHHHHHHHh-cCCCCEEECCCCccccCChhH-----HHhhccC-CCHHHHHHHHHHHHh
Confidence 59999999998 699999999999999999 889999999999999985321 1223333 347899999999999
Q ss_pred CcEEeeeeeecCCCeeeEEEEEEcCCCCeecccccccCCCCCCCCcceeecCCCCCceeEEeCCceEEEEEeccCCcHHH
Q 022174 87 GVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEA 166 (301)
Q Consensus 87 ~i~iv~G~~~~~~~~~yN~~~~i~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~~~~~~~~~~~~ig~~IC~D~~~pe~ 166 (301)
+++|++|++++.++++||++++++++|+++ .|+|+||+++ +.|..+|.+|+. ..+|+++++|+|++||||++||++
T Consensus 76 ~~~iv~G~~~~~~~~~yNs~~~i~~~G~i~-~y~K~hL~~~--~~E~~~f~~G~~-~~v~~~~~~~ig~~ICyD~~fpe~ 151 (266)
T 2e11_A 76 GAAITGSVQLRTEHGVFNRLLWATPDGALQ-YYDKRHLFRF--GNEHLRYAAGRE-RLCVEWKGWRINPQVCYDLRFPVF 151 (266)
T ss_dssp TSEEEEEEEEEETTEEEEEEEEECTTSCEE-EEECSSCCGG--GTTTTTSBCCCS-CCCEEETTEEEEEEEGGGGGCTTT
T ss_pred CCEEEEeeeEccCCcEEEEEEEECCCCCEE-EEeeeccCCC--cChhhhccCCCC-ceEEEECCEEEEEEEEeccCCHHH
Confidence 999999999888889999999999999999 9999999875 358889999985 789999999999999999999999
Q ss_pred HHHHH---HC---CCcEEEeecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEEecCccccccccccCCcceeeecce
Q 022174 167 ARAMV---LQ---GAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKSQITFYGNS 240 (301)
Q Consensus 167 ~~~~~---~~---gadlil~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~~n~~G~~~~~~~~g~~~~~~~G~S 240 (301)
.+.+. ++ |||+|++|++|+. ....+|..+.++||+||++||++||++|... +++.+.|.|
T Consensus 152 ~r~~~~~~~~~~~ga~~i~~~s~w~~-------~~~~~~~~~~~~rA~en~~~vv~an~~G~~~-------~~~~~~G~S 217 (266)
T 2e11_A 152 CRNRFDVERPGQLDFDLQLFVANWPS-------ARAYAWKTLLRARAIENLCFVAAVNRVGVDG-------NQLHYAGDS 217 (266)
T ss_dssp TCCCBSSSSTTSBSCSEEEEEECCCG-------GGHHHHHHHHHHHHHHTTSEEEEEECEEECT-------TSCEEEEEE
T ss_pred HHHHHhhhhccCCCCcEEEEeCCCCC-------CchHHHHHHHHHHHHhcCcEEEEEcCCcCCC-------CCceEeeeE
Confidence 98864 44 9999999999753 2456899999999999999999999999643 136899999
Q ss_pred EEECCCCccccccCCCCCcEEEEEechhhHHhhhhccCcccccChhhHH
Q 022174 241 FIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYK 289 (301)
Q Consensus 241 ~i~~p~G~~l~~~~~~~~~~~~~~ld~~~~~~~r~~~~~~~~~~~~~y~ 289 (301)
+|++|+|+++++++ ++++++++++|++.++..|..+|+++|+||++|+
T Consensus 218 ~ii~p~G~v~~~~~-~~e~~l~~~id~~~~~~~R~~~~~~~~rr~~~y~ 265 (266)
T 2e11_A 218 AVIDFLGQPQVEIR-EQEQVVTTTISAAALAEHRARFPAMLDGDSFVLG 265 (266)
T ss_dssp EEECTTSCEEEEEE-SSCEEEEEEECHHHHHHHHHHSCGGGGCCCEEEC
T ss_pred EEECCCCceeeecC-CCCeEEEEEEcHHHHHHHHHhCChhhhcChhhhc
Confidence 99999999999998 7899999999999999999999999999999884
No 9
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=100.00 E-value=4.7e-50 Score=373.80 Aligned_cols=271 Identities=23% Similarity=0.381 Sum_probs=230.2
Q ss_pred CCC-cceEEEEEecccCCCHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHH
Q 022174 4 GKR-REVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQEL 82 (301)
Q Consensus 4 ~~~-~~~kia~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 82 (301)
.|. ++||||++|+++..+.+.|++++.+++++|+++|+|||||||++++||...+ +....+.+. .+++++.|+++
T Consensus 9 ~m~~~~~kVa~vQ~~~~~d~~~nl~~~~~li~~A~~~gadlvv~PE~~~~~~~~~~---~~~~~a~~~-~~~~~~~l~~~ 84 (440)
T 1ems_A 9 TMATGRHFIAVCQMTSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKN---EQIDLAMAT-DCEYMEKYREL 84 (440)
T ss_dssp -CCCSEEEEEEECBCCCSCHHHHHHHHHHHHHHHHHTTCSEEEECTTCSCCCSSHH---HHHHHHHHH-HHHHHHHHHHH
T ss_pred hcccCCceEEEEecCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCcccccCcchh---HHHHhhccC-CCHHHHHHHHH
Confidence 344 3799999999998899999999999999999999999999999998875422 111111111 13688999999
Q ss_pred HHHhCcEEeeeeee---c-CCCeeeEEEEEEcCCCCeecccccccCCC-----CCCCCcceeecCCCCCcee-EEeCCce
Q 022174 83 AKELGVVMPVSFFE---E-ANNAHYNSIAIIDADGSDLGLYRKSHIPD-----GPGYQEKFYFNPGDTGFKV-FQTKFAK 152 (301)
Q Consensus 83 a~~~~i~iv~G~~~---~-~~~~~yN~~~~i~~~G~i~~~~~K~~l~~-----~~~~~e~~~~~~G~~~~~~-~~~~~~~ 152 (301)
|++++++|++|++. + .++++||++++|+++|++++.|+|+||++ ...|.|..+|.+|+. ..+ |+++++|
T Consensus 85 A~~~~i~iv~G~~~~~e~~~~~~~yNs~~~i~~~G~i~~~yrK~hL~~~~~P~~~~~~E~~~f~~G~~-~~~~~~~~~~~ 163 (440)
T 1ems_A 85 ARKHNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIPGKVRLMESEFSKAGTE-MIPPVDTPIGR 163 (440)
T ss_dssp HHHTTCEEEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEECCCCCEEEETTTEEEEGGGTCCCCCS-CCCCEEETTEE
T ss_pred HHHcCeEEEeccccccccCCCCcEEEEEEEECCCCcEEEEEeeeeecCccCCCCCcccccccccCCCC-CceeEECCCee
Confidence 99999999999654 4 34689999999999999999999999953 223468889999986 566 9999999
Q ss_pred EEEEEeccCCcHHHHHHHHHCCCcEEEeecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEEecCccccccccccCCc
Q 022174 153 IGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKS 232 (301)
Q Consensus 153 ig~~IC~D~~~pe~~~~~~~~gadlil~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~~n~~G~~~~~~~~g~~ 232 (301)
+|++||||++||++++.++.+|||++++|++|+. .....+|..+.++||+||++||++||++|... +
T Consensus 164 iG~~ICyD~~fpe~~r~l~~~Ga~il~~psa~~~------~~~~~~~~~~~~arA~En~~~vv~an~~G~~~-------~ 230 (440)
T 1ems_A 164 LGLSICYDVRFPELSLWNRKRGAQLLSFPSAFTL------NTGLAHWETLLRARAIENQCYVVAAAQTGAHN-------P 230 (440)
T ss_dssp ECCCCGGGGGCHHHHHHHHHTTCSEEECCBCCCH------HHHHHHHHHHHHHHHHHHTCEEEECBBEEEEE-------T
T ss_pred EEEEEeccccChHHHHHHHHcCCcEEEECCcCCC------CCcHHHHHHHHHHHHHhcCcEEEEecccccCC-------C
Confidence 9999999999999999999999999999999643 11346899999999999999999999999643 1
Q ss_pred ceeeecceEEECCCCccccccCCCCCcEEEEEechhhHHhhhhccCcccccChhhHHHHHh
Q 022174 233 QITFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYKVLLT 293 (301)
Q Consensus 233 ~~~~~G~S~i~~p~G~~l~~~~~~~~~~~~~~ld~~~~~~~r~~~~~~~~~~~~~y~~~~~ 293 (301)
...+.|.|+|++|+|+++++++ .++++++++||++.++..|..+++++|+|+++|++++.
T Consensus 231 ~~~~~G~S~ii~P~G~vla~~~-~~e~il~a~idl~~~~~~R~~~~~~~~rr~~~y~~~~~ 290 (440)
T 1ems_A 231 KRQSYGHSMVVDPWGAVVAQCS-ERVDMCFAEIDLSYVDTLREMQPVFSHRRSDLYTLHIN 290 (440)
T ss_dssp TEEEECCCEEECTTSCEEEECC-SSSCEEEEEEEHHHHHHHHHHSCGGGSCCTTTCCCCCC
T ss_pred CceeeeeeEEECCCCCeeccCC-CCCcEEEEEeCHHHHHHHHHhCChhhhcChhhhhcccc
Confidence 3789999999999999999987 47999999999999999999999999999999976554
No 10
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=100.00 E-value=1.2e-48 Score=352.04 Aligned_cols=255 Identities=20% Similarity=0.241 Sum_probs=219.7
Q ss_pred cceEEEEEeccc-----CCCHHHHHHHHHHHHHHHHh--CCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHH
Q 022174 7 REVVVSALQFAC-----TDDVSTNLATAERLVRAAHG--KGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKM 79 (301)
Q Consensus 7 ~~~kia~~Q~~~-----~~~~~~n~~~~~~~i~~A~~--~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (301)
++||||++|+++ .++++.|++++.+++++|++ +++|||||||++++||.... .++.+.+++.+ +++++.|
T Consensus 11 ~~~kValvQ~~i~~~~~~~d~~~Nl~~i~~~i~~A~~~~~gadLVVfPE~~l~G~~~~~--~~~~~~a~~~~-~~~~~~l 87 (341)
T 2uxy_A 11 DTVGVAVVNYKMPRLHTAAEVLDNARKIAEMIVGMKQGLPGMDLVVFPEYSLQGIMYDP--AEMMETAVAIP-GEETEIF 87 (341)
T ss_dssp TEEEEEEECCBCCBCCSHHHHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTTBCCCSH--HHHHHHCBCSS-SHHHHHH
T ss_pred CccEEEEEECCcccCCCccCHHHHHHHHHHHHHHHHhcCCCCcEEEeCCCcccccCCCH--HHHHHHhccCC-CHHHHHH
Confidence 579999999994 36899999999999999987 79999999999999975432 23444555443 4889999
Q ss_pred HHHHHHhCcEEeeeee-ecCC----CeeeEEEEEEcCCCCeecccccccCCCCCCCCcceeecCCCCCceeEEe-CCceE
Q 022174 80 QELAKELGVVMPVSFF-EEAN----NAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQT-KFAKI 153 (301)
Q Consensus 80 ~~~a~~~~i~iv~G~~-~~~~----~~~yN~~~~i~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~~~~~~~~-~~~~i 153 (301)
+++|+++++++++|++ ++.+ +++||++++|+++|+++..|+|+||+. |..+|.+|+. ..+|++ .+.||
T Consensus 88 ~~~a~~~~i~iv~G~~ge~~~~~~~~~~yNsa~vi~p~G~i~~~Y~K~hlf~-----e~~~f~pG~~-~~v~~~~~G~ri 161 (341)
T 2uxy_A 88 SRACRKANVWGVFSLTGERHEEHPRKAPYNTLVLIDNNGEIVQKYRKIIPWC-----PIEGWYPGGQ-TYVSEGPKGMKI 161 (341)
T ss_dssp HHHHHHHTCEEEEEEEEECCTTTTSSCCEEEEEEECTTSCEEEEEECSSCCT-----TTCCCBCCCC-CCCEECGGGCEE
T ss_pred HHHHHHhCcEEEEEeeeeEcCCCCCCceEEEEEEECCCCcEEEEEEeeccCC-----CccceeCCCC-ceEEECCCCCEE
Confidence 9999999999999998 7653 349999999999999999999999743 5567899986 679999 46699
Q ss_pred EEEEeccCCcHHHHHHHHHCCCcEEEeecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEEecCccccccccccCCcc
Q 022174 154 GVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKSQ 233 (301)
Q Consensus 154 g~~IC~D~~~pe~~~~~~~~gadlil~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~~n~~G~~~~~~~~g~~~ 233 (301)
|++||||++|||+++.++.+|||+|++|++|+. ....+|..+.++||+||++||++||++|... .
T Consensus 162 G~~ICyD~~fpe~~r~l~~~Gadlll~psa~~~-------~~~~~~~~l~~arA~En~~~vv~an~~G~~~--------~ 226 (341)
T 2uxy_A 162 SLIIXDDGNYPEIWRDCAMKGAELIVRCQGYMY-------PAKDQQVMMAKAMAWANNCYVAVANAAGFDG--------V 226 (341)
T ss_dssp EEEEGGGGGSHHHHHHHHHTTCSEEEEEECCBT-------TCHHHHHHHHHHHHHHHTCEEEEEECEEECS--------S
T ss_pred EEEEccCCcCcHHHHHHHHcCCCEEEEcCCCCC-------CcHHHHHHHHHHHHHhCCcEEEEECCCCCCC--------C
Confidence 999999999999999999999999999999753 2467899999999999999999999999543 4
Q ss_pred eeeecceEEECCCCccccccCCCCCcEEEEEechhhHHhhhhccCcccccChhhHH
Q 022174 234 ITFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYK 289 (301)
Q Consensus 234 ~~~~G~S~i~~p~G~~l~~~~~~~~~~~~~~ld~~~~~~~r~~~~~~~~~~~~~y~ 289 (301)
+.|.|.|+|++|+|+++++++.+++++++++||++.++..|..++.. .++|+
T Consensus 227 ~~~~G~S~Iidp~G~vla~~~~~~e~il~a~id~~~~~~~R~~~~~~----~~~~~ 278 (341)
T 2uxy_A 227 YSYFGHSAIIGFDGRTLGECGEEEMGIQYAQLSLSQIRDARANDQSQ----NHLFK 278 (341)
T ss_dssp CEEECCCEEECTTSCEEEECCSCTTCEEEEEEEHHHHHHHHHHCCTT----CHHHH
T ss_pred ceeeeEEEEECCCCCEEEECCCCCCEEEEEEEcHHHHHHHHhhcchh----hhHHh
Confidence 78999999999999999999888899999999999999999888763 44665
No 11
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=100.00 E-value=1.6e-48 Score=350.60 Aligned_cols=253 Identities=21% Similarity=0.281 Sum_probs=216.0
Q ss_pred cceEEEEEeccc-----CCCHHHHHHHHHHHHHHHHh--CCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHH
Q 022174 7 REVVVSALQFAC-----TDDVSTNLATAERLVRAAHG--KGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKM 79 (301)
Q Consensus 7 ~~~kia~~Q~~~-----~~~~~~n~~~~~~~i~~A~~--~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (301)
++||||++|+++ .++++.|++++.+++++|++ .++|||||||++++||..... +..+.+++. .+++++.|
T Consensus 12 ~~~~Va~vQ~~i~~~~~~~d~~~nl~~~~~li~~A~~~~~gadLVVfPE~~l~G~~~~~~--~~~~~a~~~-~~~~~~~l 88 (334)
T 2dyu_A 12 EGFLVAAIQFPVPIVNSRKDIDHNIESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAKW--LSEEFLLDV-PGKETELY 88 (334)
T ss_dssp -CEEEEEECCBCCCCCSHHHHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTTCCCTTTT--TSGGGCBCS-SSHHHHHH
T ss_pred CccEEEEEecCCccCCchhhHHHHHHHHHHHHHHHHhcCCCCcEEEcCCCccccCCCChh--HHHHhhccC-CCHHHHHH
Confidence 369999999985 36899999999999999987 799999999999999754321 122333333 24789999
Q ss_pred HHHHHHhCcEEeeeeeecCC-Ce--eeEEEEEEcCCCCeecccccccCCCCCCCCcceeecCCCCCceeEEe-CCceEEE
Q 022174 80 QELAKELGVVMPVSFFEEAN-NA--HYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQT-KFAKIGV 155 (301)
Q Consensus 80 ~~~a~~~~i~iv~G~~~~~~-~~--~yN~~~~i~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~~~~~~~~-~~~~ig~ 155 (301)
+++|+++++++++|++++.+ ++ +||++++|+++|+++..|+|+||+. |..+|.+|+...++|++ .+.|+|+
T Consensus 89 ~~~a~~~~i~iv~G~~e~~~~~~~~~yNsa~vi~p~G~i~~~YrK~hlf~-----e~~~f~~G~~~~~v~~~~~g~~iG~ 163 (334)
T 2dyu_A 89 AKACKEAKVYGVFSIMERNPDSNKNPYNTAIIIDPQGEIILKYRKLFPWN-----PIEPWYPGDLGMPVCEGPGGSKLAV 163 (334)
T ss_dssp HHHHHHHTCEEEEEEEECCSSTTSCCEEEEEEECTTSCEEEEEECSSCCT-----TTCCCCCCCSCCCCEECGGGCEEEE
T ss_pred HHHHHHhCeEEEEeeEEECCCCCceeEEEEEEECCCCCEEEEEeeccCCC-----CcccCcCCCCCceeEECCCCCEEEE
Confidence 99999999999999998753 44 9999999999999999999999743 44578999864458998 4669999
Q ss_pred EEeccCCcHHHHHHHHHCCCcEEEeecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEEecCccccccccccCCccee
Q 022174 156 AICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKSQIT 235 (301)
Q Consensus 156 ~IC~D~~~pe~~~~~~~~gadlil~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~~n~~G~~~~~~~~g~~~~~ 235 (301)
+||||++|||+++.++.+|||+|++|++|+. ....+|..+.++||+||++||++||++|... ...
T Consensus 164 ~ICyD~~fpe~~r~~~~~Gadlil~psaw~~-------~~~~~~~~~~~arA~En~~~vv~an~~G~~~--------~~~ 228 (334)
T 2dyu_A 164 CICHDGMIPELAREAAYKGCNVYIRISGYST-------QVNDQWILTNRSNAWHNLMYTVSVNLAGYDN--------VFY 228 (334)
T ss_dssp EEGGGGGCHHHHHHHHHTTCSEEEEEESSCT-------TSHHHHHHHHHHHHHHHTCEEEEEECSBSSS--------SCC
T ss_pred EEECCCCchHHHHHHHHcCCCEEEEeCCCCC-------CcHHHHHHHHHHHHHhCCCEEEEECCCcCCC--------Cee
Confidence 9999999999999999999999999999753 2357899999999999999999999999643 478
Q ss_pred eecceEEECCCCccccccCCCCCcEEEEEechhhHHhhhhccCcccc
Q 022174 236 FYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRD 282 (301)
Q Consensus 236 ~~G~S~i~~p~G~~l~~~~~~~~~~~~~~ld~~~~~~~r~~~~~~~~ 282 (301)
|.|.|+|++|+|+++++++.+++++++++||++.++..|..+++..+
T Consensus 229 ~~G~S~Iidp~G~vla~~~~~~e~il~a~idl~~~~~~R~~~~~~~~ 275 (334)
T 2dyu_A 229 YFGEGQICNFDGTTLVQGHRNPWEIVTGEIYPKMADNARLSWGLENN 275 (334)
T ss_dssp CCCEEEEECTTSCEEEECCCCTTCEEEEEECHHHHHHHHHHCSTTCH
T ss_pred eeeEEEEECCCCCEeeecCCCCCeEEEEEEcHHHHHHHHhhCchhhh
Confidence 99999999999999999987789999999999999999998886543
No 12
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=100.00 E-value=3e-47 Score=362.38 Aligned_cols=241 Identities=27% Similarity=0.405 Sum_probs=208.4
Q ss_pred CcceEEEEEeccc-CCCHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCcc--chHHHhhcCCCCCChhHHHHHHH
Q 022174 6 RREVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ--REDFFQRAKPYKDHPTILKMQEL 82 (301)
Q Consensus 6 ~~~~kia~~Q~~~-~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~ 82 (301)
.++||||++|+++ .+|++.|++++.+++++|+++|||||||||+++|||++.+. .+.+.+. ..+.+.++
T Consensus 4 sMkmKIAlaQln~~vGD~~~N~~~i~~~i~~Aa~~GAdLvvfPEL~ltGY~~~Dl~~~~~~~~~--------~~~~l~~l 75 (565)
T 4f4h_A 4 SMKTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHFLIAPELALSGYPPEDLLLRPAFYAA--------SDAALAEL 75 (565)
T ss_dssp --CEEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCGGGGGCHHHHHH--------HHHHHHHH
T ss_pred CcceEEEEEECCCCcccHHHHHHHHHHHHHHHHHCCCcEEECCCCcccCCChHHhhhCHHHHHH--------HHHHHHHH
Confidence 4579999999998 69999999999999999999999999999999999988764 2233332 22344444
Q ss_pred HHH----hCcEEeeeeeecCC----------------CeeeEEEEEEcCCCCeecccccccCCCCCCCCcceeecCCCCC
Q 022174 83 AKE----LGVVMPVSFFEEAN----------------NAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTG 142 (301)
Q Consensus 83 a~~----~~i~iv~G~~~~~~----------------~~~yN~~~~i~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~~ 142 (301)
+++ .+++|++|.+.+.. +++||+++++. +|++++.|+|+|||+++.|.|.++|.+|+.
T Consensus 76 a~~~~~~~~i~ivvG~p~~~~~~~~~~~~~~~~~~~~~~lyNsa~vi~-~G~i~~~y~K~hLp~~~~f~E~r~f~~G~~- 153 (565)
T 4f4h_A 76 AAQLKPFAGLAVLVGHPLRAPSADGNANRAIERGVPPVDTYNAASLIV-GGEVAGTYRKQDLPNTEVFDEKRYFATDAA- 153 (565)
T ss_dssp HHHHTTSTTCEEEEEEEEECC-----CCCCCCTTSCCCSEEEEEEEEE-TTEEEEEEECCSCCCSTTCCGGGTCCCCCC-
T ss_pred HHHhhhcCCcEEEEeeeeeecccccccccceecccCCCceEEEEEEEE-CCEEEEEEeeeecCCCcccceeccccCCCc-
Confidence 443 48999999876432 35999999995 799999999999999999999999999986
Q ss_pred ceeEEeCCceEEEEEeccCCcHHHHHHHHHCCCcEEEeecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEEecCccc
Q 022174 143 FKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGK 222 (301)
Q Consensus 143 ~~~~~~~~~~ig~~IC~D~~~pe~~~~~~~~gadlil~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~~n~~G~ 222 (301)
+.+|+++++|||+.||||+|||++.+.++.+||++|++|++|+. ...+..+|..+.++||.||++|+++||++|.
T Consensus 154 ~~v~~~~g~~iGv~IC~Dlwfpe~~r~la~~GA~ii~~psAs~~-----~~gk~~~r~~ll~arA~e~~~~vvy~N~vG~ 228 (565)
T 4f4h_A 154 PYVFELNGVKFGVVICEDVWHASAAQLAKAAGAQVLIVPNGSPY-----HMNKDAVRIDILRARIRETGLPMVYVNLVGG 228 (565)
T ss_dssp CCEEEETTEEEEECCGGGGGSSHHHHHHHHTTCSEEEEEECCBC-----CTTHHHHHHHHHHHHHHHHCCCEEEEECEEE
T ss_pred ceeEEecCcEEEEEEeehhcccchhHHHHhCCCeeeeccccccc-----ccCcHHHHHHHHHHHHHHhCCcEEEeeeecC
Confidence 78999999999999999999999999999999999999999754 1234689999999999999999999999994
Q ss_pred cccccccCCcceeeecceEEECCCCccccccCCCCCcEEEEEechhh
Q 022174 223 EIIETEHGKSQITFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDK 269 (301)
Q Consensus 223 ~~~~~~~g~~~~~~~G~S~i~~p~G~~l~~~~~~~~~~~~~~ld~~~ 269 (301)
.++..|+|+|+|++|+|+++++++.++++++++++|...
T Consensus 229 --------~~~~~f~G~S~iidp~G~vla~~~~f~e~~~~~d~d~~~ 267 (565)
T 4f4h_A 229 --------QDELVFDGGSFVLDGAGELVAKMPQFEEGNAIVEFDGAR 267 (565)
T ss_dssp --------ETTEEEEBCCEEECTTSCEEEECCBSCCEEEEEEEETTE
T ss_pred --------CCCeEEECCcceecCCCcEEEEccccccceEEEEecccc
Confidence 446999999999999999999999999999999998653
No 13
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=100.00 E-value=1.5e-47 Score=367.74 Aligned_cols=244 Identities=24% Similarity=0.337 Sum_probs=216.6
Q ss_pred CCcceEEEEEeccc-CCCHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccc--hHHHhhcCCCCCChhHHHHHH
Q 022174 5 KRREVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQR--EDFFQRAKPYKDHPTILKMQE 81 (301)
Q Consensus 5 ~~~~~kia~~Q~~~-~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~--~~~~~~~~~~~~~~~~~~l~~ 81 (301)
|..+||||++|+++ .+|++.|++++.+++++|+++|+|||||||++++||.+.+.. .++. ....+.|++
T Consensus 1 M~~~~rvA~~Q~~~~~~d~~~N~~~i~~~i~~A~~~gadLvvfPEl~ltGy~~~dl~~~~~~~--------~~~~~~l~~ 72 (590)
T 3n05_A 1 MSLQLRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSSFV--------EASRTALRE 72 (590)
T ss_dssp -CEEEEEEEEECCCCTTCHHHHHHHHHHHHHHHHTTTCSEEECCTTTTTCSCCGGGGGCHHHH--------HHHHHHHHH
T ss_pred CCCccEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCcccccCCChHHHhhCHHHH--------HHHHHHHHH
Confidence 56789999999998 699999999999999999999999999999999999876532 1111 256788999
Q ss_pred HHHHh--C----cEEeeeeeecCC----------CeeeEEEEEEcCCCCeecccccccCCCCCCCCcceeecCCCCCcee
Q 022174 82 LAKEL--G----VVMPVSFFEEAN----------NAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKV 145 (301)
Q Consensus 82 ~a~~~--~----i~iv~G~~~~~~----------~~~yN~~~~i~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~~~~~ 145 (301)
+|+++ + ++|++|++++.+ +++||++++|+ +|++++.|+|+||++++.|.|.++|.||+. +.+
T Consensus 73 la~~~~~~~~~~i~ivvG~~~~~~~~~~~~~~~~~~lyNsa~vi~-~G~i~~~y~K~~L~~~~~f~E~r~f~~G~~-~~v 150 (590)
T 3n05_A 73 LAARLAEEGFGELPVLVGYLDRSESAQPKYGQPAGAPRNAAAVLH-RGRVALTFAKHHLPNYGVFDEFRYFVPGDT-MPI 150 (590)
T ss_dssp HHHHHHHTTCTTSCEEEEEEEECSSCBTTTTBCTTCEEEEEEEEE-TTEEEEEEECCCCCSSSSCCHHHHCCCCCE-EEE
T ss_pred HHHhhhhccCCceEEEEeeEEEEcCcccccccccCCeeEEEEEEe-CCEEEEEEeCccCCCCCccCccccccCCCc-ceE
Confidence 99998 6 999999987653 36999999997 999999999999999999999999999985 889
Q ss_pred EEeCCceEEEEEeccCCc-HHHHHHHHHCCCcEEEeecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEEecCccccc
Q 022174 146 FQTKFAKIGVAICWDQWF-PEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEI 224 (301)
Q Consensus 146 ~~~~~~~ig~~IC~D~~~-pe~~~~~~~~gadlil~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~~n~~G~~~ 224 (301)
|+++++|||++||||+|| |++++.++.+|||+|++|++|+.. .....+|..+.++||+||++|+++||++|..
T Consensus 151 ~~~~g~~iG~~IC~D~~f~pe~~~~la~~Ga~ii~~psa~p~~-----~gk~~~~~~l~~~rA~e~~~~vv~an~~G~~- 224 (590)
T 3n05_A 151 VRLHGVDIALAICEDLWQDGGRVPAARSAGAGLLLSVNASPYE-----RDKDDTRLELVRKRAQEAGCTTAYLAMIGGQ- 224 (590)
T ss_dssp EEETTEEEEEEEGGGGGSTTSHHHHHHHTTCSEEEEEECCBCC-----CCSSCHHHHHHHHHHHHHTSEEEEEECEEEE-
T ss_pred EEECCEEEEEEeehhhccCChHHHHHHHcCCCEEEEecCCccc-----cCcHHHHHHHHHHHHHHhCCEEEEEecccCC-
Confidence 999999999999999999 999999999999999999997642 1235789999999999999999999999943
Q ss_pred cccccCCcceeeecceEEECCCCccccccCCCCCcEEEEEechhhHH
Q 022174 225 IETEHGKSQITFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLK 271 (301)
Q Consensus 225 ~~~~~g~~~~~~~G~S~i~~p~G~~l~~~~~~~~~~~~~~ld~~~~~ 271 (301)
+++.|+|.|+|++|+|+++++++.++++++++++|++.++
T Consensus 225 -------~~~~f~G~S~iidp~G~vla~~~~~~e~~~~~didl~~~~ 264 (590)
T 3n05_A 225 -------DELVFDGDSIVVDRDGEVVARAPQFSEGCVVLDLDLPAAE 264 (590)
T ss_dssp -------TTEEEEBCCEEECTTSCEEEECCBTSCEEEEEEEEECCCC
T ss_pred -------CCeEEeCcEEEECCCCcEEEEcCCCCCcEEEEEEcccccc
Confidence 3689999999999999999999988999999999988763
No 14
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=1.7e-46 Score=362.28 Aligned_cols=264 Identities=16% Similarity=0.227 Sum_probs=206.6
Q ss_pred ceEEEEEeccc-CCCHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHh
Q 022174 8 EVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKEL 86 (301)
Q Consensus 8 ~~kia~~Q~~~-~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~ 86 (301)
+||||++|+++ .+|++.|++++.+++++|+++|+|||||||++++||.+.+.... +. + .++..+.|+++|+++
T Consensus 5 ~~rVA~~Q~~~~~~d~~~N~~~i~~~i~~A~~~gadLvVfPEl~ltGY~~~dl~~~--~~---~-~~~~~~~l~~la~~~ 78 (634)
T 3ilv_A 5 TIRIGGAAVNQTPIDWENNVKNILDAIEEAKNANVEILCLPELCITGYGCEDLFLT--DW---V-AETAIEYCFEIAASC 78 (634)
T ss_dssp EEEEEEEEECCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCGGGGGS--HH---H-HHHHHHHHHHHHTTC
T ss_pred CeEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEcCCCccccCChHHHhhC--hh---h-hHHHHHHHHHHHHhC
Confidence 69999999998 68999999999999999999999999999999999987653110 00 0 125678999999996
Q ss_pred -CcEEeeeeeecCCCeeeEEEEEEcCCCCeecccccccCCCCCCCCcceeecCCCCC---------------ceeEEeCC
Q 022174 87 -GVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTG---------------FKVFQTKF 150 (301)
Q Consensus 87 -~i~iv~G~~~~~~~~~yN~~~~i~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~~---------------~~~~~~~~ 150 (301)
+++|++|.+++.++++||+++++ ++|++++.|+|+||+++++|.|.++|.||... ..+|++++
T Consensus 79 ~~i~ivvG~p~~~~~~lyNsa~vi-~~G~il~~y~K~hL~~~~~f~E~r~f~pG~~~~~~~~~~~g~~~p~g~~vf~~~g 157 (634)
T 3ilv_A 79 TDITVSLGLPMRIAGITYNCVCLV-ENGIVKGFSAKQFLANEGVHYETRWFTAWPRNHTTTFLYNDVKYPFGDVLYNVKD 157 (634)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEEE-ETTEEEEEEECSSCCCSTTCCGGGTCCCCCTTCEEEEEETTEEEEEESCCEEETT
T ss_pred CCCEEEEeeeEeeCCCccEEEEEE-ECCeEEEEEcCEeCCCCCCcChhhhcCCCCccccceecccCcccccCCeEEEECC
Confidence 99999999998889999999999 89999999999999999999999999999852 15899999
Q ss_pred ceEEEEEeccCCcHH-HHHHHHHCCCcEEEeecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEEecCcccccccccc
Q 022174 151 AKIGVAICWDQWFPE-AARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEH 229 (301)
Q Consensus 151 ~~ig~~IC~D~~~pe-~~~~~~~~gadlil~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~~n~~G~~~~~~~~ 229 (301)
+|||+.||||+|||+ +++.++.+|||+|++|++|+.. ..+..+|..+.++||+||++|+++||++|..+
T Consensus 158 ~~iG~~IC~D~~fPe~~~r~la~~GAdii~~psas~~~-----~gk~~~~~~l~~~rA~e~~~~vv~aN~~G~~~----- 227 (634)
T 3ilv_A 158 ARIGFEICEDAWRTDRVGIRHYEKGATLVLNPSASHFA-----FGKSAIRYDLVIGGSERFDCTYVYANLLGNEA----- 227 (634)
T ss_dssp EEEEECCTTC----------CGGGTCSEEEEEECCBCC-----TTHHHHHHHHHHHHHHHTTSEEEEEECEEESS-----
T ss_pred EEEEEEEeccccCChHHHHHHHHCCCcEEEEecCCccc-----cCcHHHHHHHHHHHHHHhCCEEEEEcCccCCC-----
Confidence 999999999999998 9999999999999999997541 23457999999999999999999999999652
Q ss_pred CCcceeeecceEEECCCCccccccCCCC---CcEEEEEechhhHHhhhhccCcccc-cChhhHHHH
Q 022174 230 GKSQITFYGNSFIAGPTGEIVAAADDKE---EAVLVAQFDLDKLKSKRSSWGVFRD-RRPELYKVL 291 (301)
Q Consensus 230 g~~~~~~~G~S~i~~p~G~~l~~~~~~~---~~~~~~~ld~~~~~~~r~~~~~~~~-~~~~~y~~~ 291 (301)
++..|+|.|+|. |+|+++++++.++ +++++++||++.++..|..++.... .-.++|+.+
T Consensus 228 --~~~~f~G~S~I~-p~G~vla~~~~f~~~~~~vi~a~iDl~~~~~~R~~~~~~~~~~~~~~~~~~ 290 (634)
T 3ilv_A 228 --GRMIYDGEVLIA-HKGKLIQRNDRLSFKNVNLIYADIATDSAETPETVLTQDDLEKEFEFWEAT 290 (634)
T ss_dssp --SSCEEECCEEEE-ETTEEEEECCSSCSSSEEEEEEEEEC--------------CCHHHHHHHHH
T ss_pred --CceEEcceEEEE-cCCeEEEECCCCCCCCceEEEEEEEhHHhHHHHhcCCCCCCCcHHHHHHHH
Confidence 258999999888 9999999998653 5899999999999988877643221 123566554
No 15
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=100.00 E-value=2.1e-45 Score=356.25 Aligned_cols=260 Identities=22% Similarity=0.286 Sum_probs=220.6
Q ss_pred cceEEEEEeccc-CCCHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccc--hHHHhhcCCCCCChhHHHHHHHH
Q 022174 7 REVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQR--EDFFQRAKPYKDHPTILKMQELA 83 (301)
Q Consensus 7 ~~~kia~~Q~~~-~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~a 83 (301)
+.||||++|+++ .+|++.|++++.+++++|+++|+|||||||++++||.+.+.. ..+.+.+ .+.++.|.++|
T Consensus 11 g~~rVAl~Q~~~~~~D~~~N~~~i~~~i~~A~~~gadLvVfPEl~ltGY~~~dl~~~~~~~~~~-----~~~l~~l~~~a 85 (680)
T 3sdb_A 11 GFVRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLDAV-----EDALLDLVTES 85 (680)
T ss_dssp TEEEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCGGGGGGGGCHHHHHHH-----HHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCChHHHhhCHHHHHhh-----HHHHHHHHHHh
Confidence 579999999999 699999999999999999999999999999999999876532 2232222 26789999999
Q ss_pred HHhCcEEeeeeeecCCCeeeEEEEEEcCCCCeecccccccCCCCCCCCcceeecCCCCCc---------------eeE--
Q 022174 84 KELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGF---------------KVF-- 146 (301)
Q Consensus 84 ~~~~i~iv~G~~~~~~~~~yN~~~~i~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~~~---------------~~~-- 146 (301)
++++++|++|++++.++++||++++++ +|++++.|+|+||+++++|.|.++|.+|.... .+|
T Consensus 86 ~~~~i~ivvG~p~~~~~~lyNsa~vi~-~G~il~~y~K~hL~~~~~f~E~r~F~~G~~~~~~i~~~g~~vpfg~~~vf~~ 164 (680)
T 3sdb_A 86 ADLLPVLVVGAPLRHRHRIYNTAVVIH-RGAVLGVVPKSYLPTYREFYERRQMAPGDGERGTIRIGGADVAFGTDLLFAA 164 (680)
T ss_dssp TTCSSEEEEEEEEEETTEEEEEEEEEE-TTEEEEEEECSCCCEETTEEGGGTEECCTTCCSEEEETTEEEEBSSCEEEEE
T ss_pred hcCCcEEEEeceEEeCCCceEEEEEEe-CCCEEEEEeeecCCCCCccChhhhcCCCCCCCceeeecCcccccCCceeEee
Confidence 999999999999988899999999998 99999999999999999999999999998521 145
Q ss_pred -EeCCceEEEEEeccCCcHHHH-HHHHHCCCcEEEeecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEEecC-cccc
Q 022174 147 -QTKFAKIGVAICWDQWFPEAA-RAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNR-IGKE 223 (301)
Q Consensus 147 -~~~~~~ig~~IC~D~~~pe~~-~~~~~~gadlil~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~~n~-~G~~ 223 (301)
+++++|||+.||||+|||++. +.++++|||+|++|++|+. +....++|..+.+.+|.+++++++++|+ .|..
T Consensus 165 ~~~~g~riGv~IC~Dl~fPe~~~r~la~~GAdiil~pSasp~-----~~gk~~~r~~l~~~~aar~~~~yV~a~~~~G~~ 239 (680)
T 3sdb_A 165 SDLPGFVLHVEIAEDMFVPMPPSAEAALAGATVLANLSGSPI-----TIGRAEDRRLLARSASARCLAAYVYAAAGEGES 239 (680)
T ss_dssp TTCTTCEEEEEEGGGGGSSSCHHHHHHHHTCCEEEEECCCCC-----CTTHHHHHHHHHHHHHHHTTSEEEEECCCTTSC
T ss_pred eccCCeEEEEEEeccccccccHHHHHHhcCCeEEEEecCCcc-----ccCcHHHHHHHHHHHHHHhCCcEEEEECCcccC
Confidence 688999999999999999985 8999999999999999754 1223456777888787776655555554 6643
Q ss_pred ccccccCCcceeeecceEEECCCCccccccCCC--CCcEEEEEechhhHHhhhhccCcccccCh
Q 022174 224 IIETEHGKSQITFYGNSFIAGPTGEIVAAADDK--EEAVLVAQFDLDKLKSKRSSWGVFRDRRP 285 (301)
Q Consensus 224 ~~~~~~g~~~~~~~G~S~i~~p~G~~l~~~~~~--~~~~~~~~ld~~~~~~~r~~~~~~~~~~~ 285 (301)
. +++.|+|.|+|+ |+|+++++++.+ ++++++++||++.++..|..++++++++.
T Consensus 240 ~-------~~l~f~G~S~I~-p~G~vla~~~~f~~~e~ll~adiDl~~l~~~R~~~~~~~~~~~ 295 (680)
T 3sdb_A 240 T-------TDLAWDGQTMIW-ENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNRR 295 (680)
T ss_dssp C-------SSCCCCCCEEEE-ETTEEEEECCSSCSSCEEEEEEEEHHHHHHHHHHCHHHHHHHH
T ss_pred C-------CCeEEeccEEEE-cCCEEEEECCCCCCCCcEEEEEEcHHHHHHHHHhCCchhhhhh
Confidence 2 358999999999 999999999887 89999999999999999999988877653
No 16
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=85.08 E-value=2.2 Score=36.25 Aligned_cols=69 Identities=20% Similarity=0.336 Sum_probs=43.0
Q ss_pred HHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeee-ecCCCeee-EEEEEE
Q 022174 32 LVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF-EEANNAHY-NSIAII 109 (301)
Q Consensus 32 ~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~-~~~~~~~y-N~~~~i 109 (301)
..+....+|+|+|+.|-.+...+. ..+...++..|.+++++++.... -.+++..| =.+.++
T Consensus 173 ~~r~l~~~Ga~li~~ps~~~~~~~-----------------~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~G~S~ii 235 (283)
T 3hkx_A 173 MVRAAAARGAQLVLVPTALAGDET-----------------SVPGILLPARAVENGITLAYANHCGPEGGLVFDGGSVVV 235 (283)
T ss_dssp HHHHHHHTTCSEEEEECCCBSCCT-----------------HHHHTHHHHHHHHHTCEEEEECBEEEETTEEEECCCEEE
T ss_pred HHHHHHHCCCCEEEECCCCCCccc-----------------HHHHHHHHHHHHHhCCEEEEEccccCCCCeEEeeEEEEE
Confidence 334445679999999976532210 13345567778899999986532 12223222 236888
Q ss_pred cCCCCeec
Q 022174 110 DADGSDLG 117 (301)
Q Consensus 110 ~~~G~i~~ 117 (301)
+|+|+++.
T Consensus 236 ~p~G~vl~ 243 (283)
T 3hkx_A 236 GPAGQPLG 243 (283)
T ss_dssp CTTSCEEE
T ss_pred CCCCCEEE
Confidence 99999874
No 17
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=80.39 E-value=3.8 Score=34.17 Aligned_cols=65 Identities=18% Similarity=-0.015 Sum_probs=41.2
Q ss_pred HHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeeee-cCCCe-eeEEEEEEc
Q 022174 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE-EANNA-HYNSIAIID 110 (301)
Q Consensus 33 i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~~-~~~~~-~yN~~~~i~ 110 (301)
.+....+|+|+|+.|=.+... .+...++..|.+++++++..... .+++. .+=.+.+++
T Consensus 155 ~r~~~~~ga~li~~ps~~~~~--------------------~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~G~S~ii~ 214 (262)
T 3ivz_A 155 ARTLALKGADVIAHPANLVMP--------------------YAPRAMPIRALENKVYTVTADRVGEERGLKFIGKSLIAS 214 (262)
T ss_dssp HHHHHHTTCSEEEEEECCCSS--------------------CHHHHHHHHHHHHTCEEEEEECCSEETTEECCCCCEEEC
T ss_pred HHHHHHCCCCEEEEcCCCCch--------------------HHHHHHHHHHHhcCcEEEEECCCCcCCCceEeeeEEEEC
Confidence 344456799999999764221 23345677788999999865421 11221 223367889
Q ss_pred CCCCeec
Q 022174 111 ADGSDLG 117 (301)
Q Consensus 111 ~~G~i~~ 117 (301)
|+|+++.
T Consensus 215 p~G~il~ 221 (262)
T 3ivz_A 215 PKAEVLS 221 (262)
T ss_dssp TTSCEEE
T ss_pred CCCCEee
Confidence 9999874
No 18
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=78.91 E-value=5.1 Score=33.85 Aligned_cols=67 Identities=15% Similarity=0.036 Sum_probs=41.8
Q ss_pred HHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeee-ecCCC-eeeEEEEEEcCC
Q 022174 35 AAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF-EEANN-AHYNSIAIIDAD 112 (301)
Q Consensus 35 ~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~-~~~~~-~~yN~~~~i~~~ 112 (301)
.+..+|+|+|+.|-.+... .. ..+...++..|.+++++++.... -.+++ .++=.+.+++|+
T Consensus 177 ~~~~~Gadli~~psa~~~~------~~-----------~~~~~~~~arA~en~~~vv~~n~~G~~~~~~~~G~S~ii~p~ 239 (281)
T 3p8k_A 177 YPARSGAKIAFYVAQWPMS------RL-----------QHWHSLLKARAIENNMFVIGTNSTGFDGNTEYAGHSIVINPN 239 (281)
T ss_dssp HHHHTTCCEEEEEECCBGG------GH-----------HHHHHHHHHHHHHHTSEEEEEECEEECSSCEEECCCEEECTT
T ss_pred HHHHCCCCEEEECCCCCCc------cH-----------HHHHHHHHHHHHHcCCEEEEEccCcCCCCcEEeeeEEEECCC
Confidence 3446799999999643211 00 13445567788899999985432 12233 333446788999
Q ss_pred CCeecc
Q 022174 113 GSDLGL 118 (301)
Q Consensus 113 G~i~~~ 118 (301)
|+++..
T Consensus 240 G~vl~~ 245 (281)
T 3p8k_A 240 GDLVGE 245 (281)
T ss_dssp SCEEEE
T ss_pred CCEEEe
Confidence 998753
No 19
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=78.86 E-value=8 Score=32.95 Aligned_cols=73 Identities=10% Similarity=0.112 Sum_probs=48.5
Q ss_pred eEEEEEeccc-C-----CCHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHH
Q 022174 9 VVVSALQFAC-T-----DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQEL 82 (301)
Q Consensus 9 ~kia~~Q~~~-~-----~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 82 (301)
+++..++... . ...+...+.+.+.++.|++-|+..|++|-. +. ......+ +... +.+..+.+.
T Consensus 90 L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~--~~---~~~~~~~-~~~~-----~~l~~l~~~ 158 (305)
T 3obe_A 90 LRISSSHLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQPSL--PR---IENEDDA-KVVS-----EIFNRAGEI 158 (305)
T ss_dssp CEEEEEBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEECCC--CC---CSSHHHH-HHHH-----HHHHHHHHH
T ss_pred CeEEEeeccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEeCCC--CC---CCCHHHH-HHHH-----HHHHHHHHH
Confidence 6676666554 1 234677889999999999999999999831 11 1111222 2221 567788888
Q ss_pred HHHhCcEEee
Q 022174 83 AKELGVVMPV 92 (301)
Q Consensus 83 a~~~~i~iv~ 92 (301)
|+++|+.+.+
T Consensus 159 a~~~Gv~l~l 168 (305)
T 3obe_A 159 TKKAGILWGY 168 (305)
T ss_dssp HHTTTCEEEE
T ss_pred HHHcCCEEEE
Confidence 8899998775
No 20
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=73.85 E-value=9.2 Score=33.19 Aligned_cols=69 Identities=20% Similarity=0.101 Sum_probs=43.1
Q ss_pred HHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeeee-cCCC-eeeEEEEEE
Q 022174 32 LVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE-EANN-AHYNSIAII 109 (301)
Q Consensus 32 ~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~~-~~~~-~~yN~~~~i 109 (301)
..+.+..+|+|+|+.|-.+... . . ..+...++..|.+++++++..... .+++ ..+=.+.++
T Consensus 174 ~~r~~~~~Gadlil~psaw~~~----~--~-----------~~~~~~~~arA~En~~~vv~an~~G~~~~~~~~G~S~Ii 236 (334)
T 2dyu_A 174 LAREAAYKGCNVYIRISGYSTQ----V--N-----------DQWILTNRSNAWHNLMYTVSVNLAGYDNVFYYFGEGQIC 236 (334)
T ss_dssp HHHHHHHTTCSEEEEEESSCTT----S--H-----------HHHHHHHHHHHHHHTCEEEEEECSBSSSSCCCCCEEEEE
T ss_pred HHHHHHHcCCCEEEEeCCCCCC----c--H-----------HHHHHHHHHHHHhCCCEEEEECCCcCCCCeeeeeEEEEE
Confidence 3344455799999999754211 0 0 134556777888999999865321 1222 334457788
Q ss_pred cCCCCeec
Q 022174 110 DADGSDLG 117 (301)
Q Consensus 110 ~~~G~i~~ 117 (301)
+|+|+++.
T Consensus 237 dp~G~vla 244 (334)
T 2dyu_A 237 NFDGTTLV 244 (334)
T ss_dssp CTTSCEEE
T ss_pred CCCCCEee
Confidence 99999874
No 21
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=73.42 E-value=9 Score=33.38 Aligned_cols=69 Identities=20% Similarity=0.209 Sum_probs=43.3
Q ss_pred HHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeeee-cCCC-eeeEEEEEE
Q 022174 32 LVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE-EANN-AHYNSIAII 109 (301)
Q Consensus 32 ~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~~-~~~~-~~yN~~~~i 109 (301)
..+.+..+|+|+|+.|-.+..+ . . ..+...++..|.+++++++..... .+++ .++=.+.++
T Consensus 174 ~~r~l~~~Gadlll~psa~~~~-----~-~-----------~~~~~l~~arA~En~~~vv~an~~G~~~~~~~~G~S~Ii 236 (341)
T 2uxy_A 174 IWRDCAMKGAELIVRCQGYMYP-----A-K-----------DQQVMMAKAMAWANNCYVAVANAAGFDGVYSYFGHSAII 236 (341)
T ss_dssp HHHHHHHTTCSEEEEEECCBTT-----C-H-----------HHHHHHHHHHHHHHTCEEEEEECEEECSSCEEECCCEEE
T ss_pred HHHHHHHcCCCEEEEcCCCCCC-----c-H-----------HHHHHHHHHHHHhCCcEEEEECCCCCCCCceeeeEEEEE
Confidence 3344455799999999654211 0 0 145566778889999999865321 1222 233356888
Q ss_pred cCCCCeec
Q 022174 110 DADGSDLG 117 (301)
Q Consensus 110 ~~~G~i~~ 117 (301)
+|+|+++.
T Consensus 237 dp~G~vla 244 (341)
T 2uxy_A 237 GFDGRTLG 244 (341)
T ss_dssp CTTSCEEE
T ss_pred CCCCCEEE
Confidence 99999874
No 22
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=73.14 E-value=5.3 Score=33.79 Aligned_cols=68 Identities=15% Similarity=0.104 Sum_probs=41.1
Q ss_pred HHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeeeec--C-CCeeeEEEEEEc
Q 022174 34 RAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEE--A-NNAHYNSIAIID 110 (301)
Q Consensus 34 ~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~~~--~-~~~~yN~~~~i~ 110 (301)
+....+|+|+|+.|-.+... . .. ..+...++..|.+++++++.....- . +...+=.+.+++
T Consensus 179 r~l~~~Ga~ll~~ps~~~~~----~-~~-----------~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~G~S~ii~ 242 (291)
T 1f89_A 179 MLSARKGAFAMIYPSAFNTV----T-GP-----------LHWHLLARSRAVDNQVYVMLCSPARNLQSSYHAYGHSIVVD 242 (291)
T ss_dssp HHHHHTTEEEEEEECCCBTT----H-HH-----------HHHHHHHHHHHHHHTSEEEEECCCCCTTSSSCBCCCCEEEC
T ss_pred HHHHhhCCCEEEECCcCCCC----C-cH-----------HHHHHHHHHHHHHcCCEEEEecCccCCCCCCeeeeEEEEEC
Confidence 33445799999999532110 0 00 1344566777889999998654221 1 113333568899
Q ss_pred CCCCeec
Q 022174 111 ADGSDLG 117 (301)
Q Consensus 111 ~~G~i~~ 117 (301)
|+|+++.
T Consensus 243 p~G~vl~ 249 (291)
T 1f89_A 243 PRGKIVA 249 (291)
T ss_dssp TTSCEEE
T ss_pred CCCCEEE
Confidence 9999874
No 23
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=72.81 E-value=21 Score=29.45 Aligned_cols=64 Identities=6% Similarity=-0.088 Sum_probs=40.7
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeee
Q 022174 21 DVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (301)
Q Consensus 21 ~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G 93 (301)
..+..++.+.+.++.|++-|++.|++.= |........+.++... +.+..+.+.|+++|+.+.+=
T Consensus 87 ~r~~~~~~~~~~i~~A~~lGa~~v~~~~----g~~~~~~~~~~~~~~~-----~~l~~l~~~a~~~Gv~l~lE 150 (269)
T 3ngf_A 87 REQEFRDNVDIALHYALALDCRTLHAMS----GITEGLDRKACEETFI-----ENFRYAADKLAPHGITVLVE 150 (269)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEECCB----CBCTTSCHHHHHHHHH-----HHHHHHHHHHGGGTCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEcc----CCCCCCCHHHHHHHHH-----HHHHHHHHHHHHcCCEEEEe
Confidence 3567888999999999999999888732 2111111111222221 45677788888888886653
No 24
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=68.13 E-value=8 Score=32.37 Aligned_cols=68 Identities=12% Similarity=0.098 Sum_probs=40.9
Q ss_pred HHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeeee-cCC--CeeeEEEEEEc
Q 022174 34 RAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE-EAN--NAHYNSIAIID 110 (301)
Q Consensus 34 ~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~~-~~~--~~~yN~~~~i~ 110 (301)
+....+|+|+|+.|-.+... . .. ..+...++..|.+++++++..... .++ ...+=.+.+++
T Consensus 163 r~~~~~ga~ll~~ps~~~~~----~-~~-----------~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~G~S~ii~ 226 (276)
T 2w1v_A 163 QIYAQRGCQLLVYPGAFNLT----T-GP-----------AHWELLQRARAVDNQVYVATASPARDDKASYVAWGHSTVVD 226 (276)
T ss_dssp HHHHHTTEEEEEEECCCCTT----H-HH-----------HHHHHHHHHHHHHHTCEEEEECCCCCTTSSSCCCCCCEEEC
T ss_pred HHHHHcCCCEEEECCcCCCc----C-CH-----------HHHHHHHHHHHHHcCcEEEEecccccCCCCceeeeEeEEEC
Confidence 33455799999999643111 0 00 134455677788999999865422 111 12333567889
Q ss_pred CCCCeec
Q 022174 111 ADGSDLG 117 (301)
Q Consensus 111 ~~G~i~~ 117 (301)
|+|+++.
T Consensus 227 p~G~v~~ 233 (276)
T 2w1v_A 227 PWGQVLT 233 (276)
T ss_dssp TTSCEEE
T ss_pred CCCCEeE
Confidence 9999874
No 25
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=68.07 E-value=8 Score=36.39 Aligned_cols=71 Identities=13% Similarity=0.149 Sum_probs=45.6
Q ss_pred HHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeee-eecCCC-eeeEEEEEEc
Q 022174 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSF-FEEANN-AHYNSIAIID 110 (301)
Q Consensus 33 i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~-~~~~~~-~~yN~~~~i~ 110 (301)
.+.+...|+++|+-|=.+... .. .. ..+...++..|.+++++++... .-.+++ .++-.+++++
T Consensus 178 ~r~la~~GA~ii~~psAs~~~--~g--k~-----------~~r~~ll~arA~e~~~~vvy~N~vG~~~~~~f~G~S~iid 242 (565)
T 4f4h_A 178 AQLAKAAGAQVLIVPNGSPYH--MN--KD-----------AVRIDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVLD 242 (565)
T ss_dssp HHHHHHTTCSEEEEEECCBCC--TT--HH-----------HHHHHHHHHHHHHHCCCEEEEECEEEETTEEEEBCCEEEC
T ss_pred hHHHHhCCCeeeecccccccc--cC--cH-----------HHHHHHHHHHHHHhCCcEEEeeeecCCCCeEEECCcceec
Confidence 334456799999999644211 00 00 1345667888999999988543 222233 4566789999
Q ss_pred CCCCeecc
Q 022174 111 ADGSDLGL 118 (301)
Q Consensus 111 ~~G~i~~~ 118 (301)
|+|+++..
T Consensus 243 p~G~vla~ 250 (565)
T 4f4h_A 243 GAGELVAK 250 (565)
T ss_dssp TTSCEEEE
T ss_pred CCCcEEEE
Confidence 99998753
No 26
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=67.53 E-value=13 Score=30.91 Aligned_cols=61 Identities=15% Similarity=-0.030 Sum_probs=39.2
Q ss_pred CCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeee-ecCCC--eeeEEEEEEcCCCCee
Q 022174 40 GANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF-EEANN--AHYNSIAIIDADGSDL 116 (301)
Q Consensus 40 ~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~-~~~~~--~~yN~~~~i~~~G~i~ 116 (301)
|+|+|+.|-.+... .. ..+...++..|.+++++++.... -.+++ ..+=.+.+++|+|+++
T Consensus 165 ga~~i~~~s~w~~~------~~-----------~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~G~S~ii~p~G~v~ 227 (266)
T 2e11_A 165 DFDLQLFVANWPSA------RA-----------YAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQPQ 227 (266)
T ss_dssp SCSEEEEEECCCGG------GH-----------HHHHHHHHHHHHHTTSEEEEEECEEECTTSCEEEEEEEEECTTSCEE
T ss_pred CCcEEEEeCCCCCC------ch-----------HHHHHHHHHHHHhcCcEEEEEcCCcCCCCCceEeeeEEEECCCCcee
Confidence 89999998764221 00 13445667788999999986532 22222 3334578899999987
Q ss_pred c
Q 022174 117 G 117 (301)
Q Consensus 117 ~ 117 (301)
.
T Consensus 228 ~ 228 (266)
T 2e11_A 228 V 228 (266)
T ss_dssp E
T ss_pred e
Confidence 4
No 27
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=66.60 E-value=19 Score=30.08 Aligned_cols=63 Identities=16% Similarity=0.297 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeee
Q 022174 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (301)
Q Consensus 23 ~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G 93 (301)
+..++.+.+.++.|++-|++.|+++=. ..+. .....+.++... +.+..+.+.|+++++.+.+=
T Consensus 104 ~~~~~~~~~~i~~A~~lG~~~v~~~~~--~~~~-~~~~~~~~~~~~-----~~l~~l~~~a~~~Gv~l~lE 166 (295)
T 3cqj_A 104 AQGLEIMRKAIQFAQDVGIRVIQLAGY--DVYY-QEANNETRRRFR-----DGLKESVEMASRAQVTLAME 166 (295)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECCC--SCSS-SCCCHHHHHHHH-----HHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECCC--CCCc-CcCHHHHHHHHH-----HHHHHHHHHHHHhCCEEEEe
Confidence 466788999999999999999998711 1111 111122222221 45677888888899887653
No 28
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=66.23 E-value=18 Score=30.09 Aligned_cols=80 Identities=16% Similarity=0.147 Sum_probs=47.0
Q ss_pred ceEEEEEeccc-----CCC---HHHHHHHHHHHHHHHHhCCCcEEEecccccCccc-CCccchHHHhhcCCCCCChhHHH
Q 022174 8 EVVVSALQFAC-----TDD---VSTNLATAERLVRAAHGKGANIILIQELFEGYYF-CQAQREDFFQRAKPYKDHPTILK 78 (301)
Q Consensus 8 ~~kia~~Q~~~-----~~~---~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~-~~~~~~~~~~~~~~~~~~~~~~~ 78 (301)
.++|..+.... ..+ .+..++.+.+.++.|++-|++.|+++=.+. .+. ......+.++... +.+..
T Consensus 77 gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~-~~~~~~p~~~~~~~~~~-----~~l~~ 150 (287)
T 3kws_A 77 NIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAFN-GQVPALPHTMETRDFLC-----EQFNE 150 (287)
T ss_dssp SCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSCCT-TCCSBCCSSHHHHHHHH-----HHHHH
T ss_pred CCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcC-CcCCCCCCHHHHHHHHH-----HHHHH
Confidence 36666555432 122 356788899999999999999888752111 111 0001222222222 56777
Q ss_pred HHHHHHHhCcEEeee
Q 022174 79 MQELAKELGVVMPVS 93 (301)
Q Consensus 79 l~~~a~~~~i~iv~G 93 (301)
+.+.|+++|+.+.+=
T Consensus 151 l~~~a~~~Gv~l~lE 165 (287)
T 3kws_A 151 MGTFAAQHGTSVIFE 165 (287)
T ss_dssp HHHHHHHTTCCEEEC
T ss_pred HHHHHHHcCCEEEEE
Confidence 888888988876553
No 29
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=64.86 E-value=21 Score=33.58 Aligned_cols=70 Identities=20% Similarity=0.280 Sum_probs=43.8
Q ss_pred HHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeee-ecCCCeeeE-EEEEEcC
Q 022174 34 RAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF-EEANNAHYN-SIAIIDA 111 (301)
Q Consensus 34 ~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~-~~~~~~~yN-~~~~i~~ 111 (301)
+.+..+|+|+|+.|=.+. +... ....+...++..|.+++++++.... -..++..|. .+++++|
T Consensus 174 ~~la~~Ga~ii~~psa~p--~~~g-------------k~~~~~~l~~~rA~e~~~~vv~an~~G~~~~~~f~G~S~iidp 238 (590)
T 3n05_A 174 PAARSAGAGLLLSVNASP--YERD-------------KDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDR 238 (590)
T ss_dssp HHHHHTTCSEEEEEECCB--CCCC-------------SSCHHHHHHHHHHHHHTSEEEEEECEEEETTEEEEBCCEEECT
T ss_pred HHHHHcCCCEEEEecCCc--cccC-------------cHHHHHHHHHHHHHHhCCEEEEEecccCCCCeEEeCcEEEECC
Confidence 344567999999986542 1110 0124566788889999999985432 122333343 4678899
Q ss_pred CCCeecc
Q 022174 112 DGSDLGL 118 (301)
Q Consensus 112 ~G~i~~~ 118 (301)
+|+++..
T Consensus 239 ~G~vla~ 245 (590)
T 3n05_A 239 DGEVVAR 245 (590)
T ss_dssp TSCEEEE
T ss_pred CCcEEEE
Confidence 9998753
No 30
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=64.83 E-value=17 Score=30.30 Aligned_cols=62 Identities=10% Similarity=0.054 Sum_probs=41.2
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEee
Q 022174 21 DVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (301)
Q Consensus 21 ~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~ 92 (301)
..+..++.+.+.++.|++-|++.|++. +|+.+.. ..+.++... ..+..+.+.|+++|+.+.+
T Consensus 96 ~r~~~~~~~~~~i~~a~~lG~~~v~~~----~G~~~~~-~~~~~~~~~-----~~l~~l~~~a~~~Gv~l~l 157 (290)
T 3tva_A 96 TRASRVAEMKEISDFASWVGCPAIGLH----IGFVPES-SSPDYSELV-----RVTQDLLTHAANHGQAVHL 157 (290)
T ss_dssp THHHHHHHHHHHHHHHHHHTCSEEEEC----CCCCCCT-TSHHHHHHH-----HHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEc----CCCCccc-chHHHHHHH-----HHHHHHHHHHHHcCCEEEE
Confidence 356788999999999999999998874 2322221 111222221 4577788888888988765
No 31
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=61.82 E-value=25 Score=29.97 Aligned_cols=81 Identities=15% Similarity=0.133 Sum_probs=51.6
Q ss_pred ceEEEEEecccCCCH--------------------HHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhc
Q 022174 8 EVVVSALQFACTDDV--------------------STNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRA 67 (301)
Q Consensus 8 ~~kia~~Q~~~~~~~--------------------~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~ 67 (301)
.||++.+-++...+. ..|++.+.+.++.+.+.|.+++=+.=-.++-|......-.+.+..
T Consensus 22 ~~rlG~~~~~~~~~~~~~~t~~~~~~~~~~l~~~~~~nl~~l~~~l~~~~~~gi~~~ri~s~~f~~ft~~~~~w~~~~~~ 101 (301)
T 2j6v_A 22 MIRLGYPCENLTLGATTNRTLRLAHLTEERVREKAAENLRDLERILRFNADHGFALFRIGQHLIPFASHPLFPYDWEGAY 101 (301)
T ss_dssp SEEEEEESEETTTTEESCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEECCGGGSTTTTSTTCCSCHHHHH
T ss_pred eeEEEEEEEeccCCCCCccceeHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeccCcccccCCCcccCCcCCCC
Confidence 578888866652222 789999999999999999888777433333332211100111111
Q ss_pred CCCCCChhHHHHHHHHHHhCcEEeee
Q 022174 68 KPYKDHPTILKMQELAKELGVVMPVS 93 (301)
Q Consensus 68 ~~~~~~~~~~~l~~~a~~~~i~iv~G 93 (301)
...++.++++++++++.+++.
T Consensus 102 -----~~~~~~~~~~~~~~gi~i~~H 122 (301)
T 2j6v_A 102 -----EEELARLGALARAFGQRLSMH 122 (301)
T ss_dssp -----HHHHHHHHHHHHHTTCEEEEC
T ss_pred -----HHHHHHHHHHHHHcCCeEEEe
Confidence 145678899999999876654
No 32
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=60.35 E-value=48 Score=27.88 Aligned_cols=60 Identities=5% Similarity=0.037 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcE--Eee
Q 022174 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVV--MPV 92 (301)
Q Consensus 22 ~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~--iv~ 92 (301)
.++.++.+.+.++.|++-|+..|+.|-. +. ......+ +... +.+..+.+.|+++|+. +.+
T Consensus 103 ~~~~~~~~~~~i~~A~~lG~~~v~~~~~--~~---~~~~~~~-~~~~-----~~l~~l~~~a~~~Gv~~~l~~ 164 (303)
T 3l23_A 103 TPKIMEYWKATAADHAKLGCKYLIQPMM--PT---ITTHDEA-KLVC-----DIFNQASDVIKAEGIATGFGY 164 (303)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEECSC--CC---CCSHHHH-HHHH-----HHHHHHHHHHHHTTCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCC--CC---CCCHHHH-HHHH-----HHHHHHHHHHHHCCCcceEEE
Confidence 3677889999999999999999999732 11 1111122 2221 5678888889999988 654
No 33
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=59.10 E-value=35 Score=28.65 Aligned_cols=67 Identities=13% Similarity=0.029 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCc--cchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeee
Q 022174 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQA--QREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (301)
Q Consensus 22 ~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G 93 (301)
.++.++.+.+.++.|++-|+..|+.|=++..|..... ...+.++.+. +.+..+.+.|+++++.+.+=
T Consensus 102 r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~-----~~l~~l~~~a~~~gv~l~lE 170 (309)
T 2hk0_A 102 RAAGKAFFERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGV-----EGINGIADFANDLGINLCIE 170 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHH-----HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeeccccccccCCCcCChHHHHHHHH-----HHHHHHHHHHHHcCCEEEEe
Confidence 3567889999999999999999886532111321111 1122222221 56677788888888876553
No 34
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=59.04 E-value=60 Score=26.16 Aligned_cols=63 Identities=10% Similarity=-0.044 Sum_probs=40.5
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCcc-chHHHhhcCCCCCChhHHHHHHHHHHhCcEEee
Q 022174 21 DVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ-REDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (301)
Q Consensus 21 ~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~ 92 (301)
..++.++.+.+.++.|++-|+..|++. +|...... ..+.++... +.+..+.+.|+++++.+.+
T Consensus 79 ~~~~~~~~~~~~i~~a~~lG~~~v~~~----~g~~~~~~~~~~~~~~~~-----~~l~~l~~~a~~~gv~l~~ 142 (260)
T 1k77_A 79 REHEAHADIDLALEYALALNCEQVHVM----AGVVPAGEDAERYRAVFI-----DNIRYAADRFAPHGKRILV 142 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEECC----CCBCCTTSCHHHHHHHHH-----HHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEC----cCCCCCCCCHHHHHHHHH-----HHHHHHHHHHHHcCCEEEE
Confidence 346788999999999999999998873 23221111 112222221 4567777788888887655
No 35
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=58.11 E-value=24 Score=28.66 Aligned_cols=62 Identities=13% Similarity=-0.033 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCcc---chHHHhhcCCCCCChhHHHHHHHHHHhCcEEee
Q 022174 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ---REDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (301)
Q Consensus 22 ~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~ 92 (301)
.+..++.+.+.++.|++-|+..|++.= |+..... ..+.++... +.+..+.+.|+++++.+.+
T Consensus 71 r~~~~~~~~~~i~~A~~lGa~~v~~~~----g~~~~~~~~~~~~~~~~~~-----~~l~~l~~~a~~~gv~l~l 135 (254)
T 3ayv_A 71 RGLTLRRLLFGLDRAAELGADRAVFHS----GIPHGRTPEEALERALPLA-----EALGLVVRRARTLGVRLLL 135 (254)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEC----CCCTTCCHHHHHHTHHHHH-----HHTHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEECC----CCCcccccccHHHHHHHHH-----HHHHHHHHHHhhcCCEEEE
Confidence 356678899999999999999887642 2221111 111112111 4456777778888887654
No 36
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=57.86 E-value=49 Score=27.19 Aligned_cols=76 Identities=13% Similarity=0.013 Sum_probs=47.1
Q ss_pred eEEEEEeccc----CCCHHHHHHHHHHHHHHHHhCCCcEEEe-cccccCcccCCccchHHHhhcCCCCCChhHHHHHHHH
Q 022174 9 VVVSALQFAC----TDDVSTNLATAERLVRAAHGKGANIILI-QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELA 83 (301)
Q Consensus 9 ~kia~~Q~~~----~~~~~~n~~~~~~~i~~A~~~~~dlvvf-PE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a 83 (301)
+++..+.... ....++.++.+.+.++.|++-|+..|++ |-....+ ....+.++... ..+..+.+.|
T Consensus 62 l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~----~~~~~~~~~~~-----~~l~~l~~~a 132 (286)
T 3dx5_A 62 LEITMISDYLDISLSADFEKTIEKCEQLAILANWFKTNKIRTFAGQKGSA----DFSQQERQEYV-----NRIRMICELF 132 (286)
T ss_dssp CCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTCCEEEECSCSSCGG----GSCHHHHHHHH-----HHHHHHHHHH
T ss_pred CeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhCCCEEEEcCCCCCcc----cCcHHHHHHHH-----HHHHHHHHHH
Confidence 5666664332 3456788899999999999999998855 4321111 11111222221 5667788888
Q ss_pred HHhCcEEeee
Q 022174 84 KELGVVMPVS 93 (301)
Q Consensus 84 ~~~~i~iv~G 93 (301)
+++|+.+.+=
T Consensus 133 ~~~Gv~l~lE 142 (286)
T 3dx5_A 133 AQHNMYVLLE 142 (286)
T ss_dssp HHTTCEEEEE
T ss_pred HHhCCEEEEe
Confidence 8989876553
No 37
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=57.76 E-value=24 Score=28.89 Aligned_cols=76 Identities=12% Similarity=0.188 Sum_probs=44.9
Q ss_pred eEEEEEeccc--C-CC---HHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCcc-chHHHhhcCCCCCChhHHHHHH
Q 022174 9 VVVSALQFAC--T-DD---VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ-REDFFQRAKPYKDHPTILKMQE 81 (301)
Q Consensus 9 ~kia~~Q~~~--~-~~---~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~~l~~ 81 (301)
+++..++... . .+ .+..++.+.+.++.|++-|++.|++. +|+..... ..+.++... +.+..+.+
T Consensus 60 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~----~g~~~~~~~~~~~~~~~~-----~~l~~l~~ 130 (278)
T 1i60_A 60 IKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLGVKYVVAV----PLVTEQKIVKEEIKKSSV-----DVLTELSD 130 (278)
T ss_dssp CEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTCCEEEEE----CCBCSSCCCHHHHHHHHH-----HHHHHHHH
T ss_pred CCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEe----cCCCCCCCCHHHHHHHHH-----HHHHHHHH
Confidence 5665555432 1 23 34567889999999999999988872 23221111 112222221 45677777
Q ss_pred HHHHhCcEEeee
Q 022174 82 LAKELGVVMPVS 93 (301)
Q Consensus 82 ~a~~~~i~iv~G 93 (301)
.|+++|+.+.+=
T Consensus 131 ~a~~~gv~l~lE 142 (278)
T 1i60_A 131 IAEPYGVKIALE 142 (278)
T ss_dssp HHGGGTCEEEEE
T ss_pred HHHhcCCEEEEE
Confidence 888888876553
No 38
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=56.39 E-value=37 Score=28.54 Aligned_cols=42 Identities=17% Similarity=0.109 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhCcEEeeeee-ecCCC-eeeEEEEEEcCCCCeec
Q 022174 76 ILKMQELAKELGVVMPVSFF-EEANN-AHYNSIAIIDADGSDLG 117 (301)
Q Consensus 76 ~~~l~~~a~~~~i~iv~G~~-~~~~~-~~yN~~~~i~~~G~i~~ 117 (301)
...++..|.+++++++.... -.+++ ..+=.+.+++|+|+++.
T Consensus 216 ~~~~~~rA~en~~~vv~~n~~G~~~~~~~~G~S~ii~p~G~vl~ 259 (303)
T 1uf5_A 216 LLSMQAGSYQNGAWSAAAGKAGMEENCMLLGHSCIVAPTGEIVA 259 (303)
T ss_dssp HHHHHHHHHHHTCEEEEEEBCEEETTEEECCCCEEECTTSCEEE
T ss_pred HHHHHhhhhcCCcEEEEECcccccCCccccceeEEECCCCCEec
Confidence 34567788899999986532 11222 33334678899999874
No 39
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=56.37 E-value=25 Score=28.81 Aligned_cols=65 Identities=14% Similarity=0.058 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeee
Q 022174 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (301)
Q Consensus 22 ~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G 93 (301)
.+..++.+.+.++.|++-|++.|+++=...+.. ..+ ..+.++... +.+..+.+.|+++++.+.+=
T Consensus 78 r~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~-~~~-~~~~~~~~~-----~~l~~l~~~a~~~gv~l~lE 142 (275)
T 3qc0_A 78 REKAIDDNRRAVDEAAELGADCLVLVAGGLPGG-SKN-IDAARRMVV-----EGIAAVLPHARAAGVPLAIE 142 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSCEEEECBCCCTT-CCC-HHHHHHHHH-----HHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEeeCCCCCC-CcC-HHHHHHHHH-----HHHHHHHHHHHHcCCEEEEe
Confidence 456778899999999999999888762221110 011 111222221 56778888888888876653
No 40
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=55.59 E-value=15 Score=33.17 Aligned_cols=69 Identities=12% Similarity=0.037 Sum_probs=41.6
Q ss_pred HHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeeee-cC-CCe-eeEEEEEEc
Q 022174 34 RAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE-EA-NNA-HYNSIAIID 110 (301)
Q Consensus 34 ~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~~-~~-~~~-~yN~~~~i~ 110 (301)
+....+|+|+++.|-.+... ... ..+...++..|.+++++++..... .+ ++. .+=.+.+++
T Consensus 179 r~l~~~Ga~il~~psa~~~~-----~~~-----------~~~~~~~~arA~En~~~vv~an~~G~~~~~~~~~G~S~ii~ 242 (440)
T 1ems_A 179 LWNRKRGAQLLSFPSAFTLN-----TGL-----------AHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVD 242 (440)
T ss_dssp HHHHHTTCSEEECCBCCCHH-----HHH-----------HHHHHHHHHHHHHHTCEEEECBBEEEEETTEEEECCCEEEC
T ss_pred HHHHHcCCcEEEECCcCCCC-----CcH-----------HHHHHHHHHHHHhcCcEEEEecccccCCCCceeeeeeEEEC
Confidence 33445799999998643110 000 134455677789999999865321 11 212 232568899
Q ss_pred CCCCeecc
Q 022174 111 ADGSDLGL 118 (301)
Q Consensus 111 ~~G~i~~~ 118 (301)
|+|+++..
T Consensus 243 P~G~vla~ 250 (440)
T 1ems_A 243 PWGAVVAQ 250 (440)
T ss_dssp TTSCEEEE
T ss_pred CCCCeecc
Confidence 99998764
No 41
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}
Probab=55.58 E-value=35 Score=29.73 Aligned_cols=68 Identities=4% Similarity=-0.030 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeee
Q 022174 27 ATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF 95 (301)
Q Consensus 27 ~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~ 95 (301)
++..+.++.+++.|++-||+---...|+...+....+..... .+..+.++.+.+.|+++|+.+.+|..
T Consensus 54 ~eW~~~~~~mK~~GikyvIl~~~~~~gf~~~pS~~~~~~~~~-~p~~Dlv~~~l~aa~k~Gmkv~~Gly 121 (340)
T 4h41_A 54 KEWDLDFQHMKRIGIDTVIMIRSGYRKFMTYPSPYLLKKGCY-MPSVDLVDMYLRLAEKYNMKFYFGLY 121 (340)
T ss_dssp HHHHHHHHHHHHTTCCEEEESCSEETTEESSCCHHHHHTTCC-CCSBCHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEEEEeeCCeeccCcccccccCcc-CCcccHHHHHHHHHHHhCCeEEEecC
Confidence 444566677778899999987655555544332211222121 12346799999999999999988863
No 42
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=55.08 E-value=15 Score=32.89 Aligned_cols=65 Identities=17% Similarity=0.059 Sum_probs=38.4
Q ss_pred HHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeeee-cCC---------------
Q 022174 36 AHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE-EAN--------------- 99 (301)
Q Consensus 36 A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~~-~~~--------------- 99 (301)
...+|+|+|+.|=.+.... .. ..+...++..|.+++++++..... .+.
T Consensus 246 la~~GAdill~psa~~~~~-----~~-----------~~w~~l~raRAiEn~~~Vv~aN~vG~~~~~~~~~~~~g~~~~~ 309 (405)
T 2vhh_A 246 FGLNGAEIVFNPSATIGRL-----SE-----------PLWSIEARNAAIANSYFTVPINRVGTEQFPNEYTSGDGNKAHK 309 (405)
T ss_dssp HHHTTCSEEEEEECCBCTT-----TH-----------HHHHHHHHHHHHHHTSEEEEEECEECCCCC-------------
T ss_pred HHHcCCCEEEEcccCCCCC-----CH-----------HHHHHHHHHHHHHcCceEEEeccccccccccccccccCccccc
Confidence 3456999999998553210 00 134445677788999999854321 110
Q ss_pred --CeeeEEEEEEcCCCCee
Q 022174 100 --NAHYNSIAIIDADGSDL 116 (301)
Q Consensus 100 --~~~yN~~~~i~~~G~i~ 116 (301)
..++=.+.+++|+|+++
T Consensus 310 ~~~~f~G~S~IidP~G~vl 328 (405)
T 2vhh_A 310 EFGPFYGSSYVAAPDGSRT 328 (405)
T ss_dssp ----EECCCCCBCTTSCBC
T ss_pred cCceeccccceECCCCCEe
Confidence 11233467788888875
No 43
>4fva_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; HET: EDO; 2.07A {Caenorhabditis elegans}
Probab=54.86 E-value=9 Score=30.81 Aligned_cols=39 Identities=21% Similarity=0.371 Sum_probs=24.3
Q ss_pred ceEEEEEeccc--CCCHHHHHHHHHHHHHHHHhCCCcEEEeccc
Q 022174 8 EVVVSALQFAC--TDDVSTNLATAERLVRAAHGKGANIILIQEL 49 (301)
Q Consensus 8 ~~kia~~Q~~~--~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~ 49 (301)
+|||.....+- ..+.....+.+.+.|+ +.++|+|+|-|.
T Consensus 13 ~l~v~s~Ni~g~~~~~~~~r~~~i~~~i~---~~~pDIi~LQEv 53 (256)
T 4fva_A 13 EVSVMSWNIDGLDGRSLLTRMKAVAHIVK---NVNPDILFLQEV 53 (256)
T ss_dssp EEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEE
T ss_pred EEEEEEEecCCCCCcCHHHHHHHHHHHHH---HcCCCEEEEEec
Confidence 45555555542 2345555556666664 458999999995
No 44
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=54.07 E-value=46 Score=27.58 Aligned_cols=66 Identities=9% Similarity=0.062 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEeccc--ccCcccCC------cc-chHHHhhcCCCCCChhHHHHHHHHHHhCcEEee
Q 022174 22 VSTNLATAERLVRAAHGKGANIILIQEL--FEGYYFCQ------AQ-REDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (301)
Q Consensus 22 ~~~n~~~~~~~i~~A~~~~~dlvvfPE~--~l~g~~~~------~~-~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~ 92 (301)
.+..++.+.+.++.|++-|++.|+++.. +..|.... .. ..+.++.+. +.+..+.+.|+++++.+.+
T Consensus 85 ~~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~-----~~l~~l~~~a~~~gv~l~l 159 (301)
T 3cny_A 85 IEKASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVC-----KGLNHYGEIAAKYGLKVAY 159 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHH-----HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHH-----HHHHHHHHHHHHcCCEEEE
Confidence 4556788899999999999999887642 11122111 00 112222221 5667788888889987665
No 45
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=49.18 E-value=45 Score=25.68 Aligned_cols=61 Identities=13% Similarity=0.172 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEe
Q 022174 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMP 91 (301)
Q Consensus 22 ~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv 91 (301)
.++..+.+.++++.+++.++.+|++--...+. .....+.+.. ..+.+.++++|+++++.++
T Consensus 112 ~~~~~~~l~~~i~~~~~~~~~vil~~p~~~~~----~~~~~~~~~~-----~~~n~~~~~~a~~~~~~~v 172 (216)
T 3rjt_A 112 IDEYRDTLRHLVATTKPRVREMFLLSPFYLEP----NRSDPMRKTV-----DAYIEAMRDVAASEHVPFV 172 (216)
T ss_dssp HHHHHHHHHHHHHHHGGGSSEEEEECCCCCCC----CTTSHHHHHH-----HHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHHHhcCCeEEEECCCcCCC----CcchHHHHHH-----HHHHHHHHHHHHHcCCeEE
Confidence 56677778888888887799998882111111 0010111111 1566788899999887654
No 46
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=48.85 E-value=45 Score=29.59 Aligned_cols=40 Identities=5% Similarity=0.103 Sum_probs=30.8
Q ss_pred eEEEEEeccc--------CCCHHHHHHHHHHHHHHHHhCCCcEEEecc
Q 022174 9 VVVSALQFAC--------TDDVSTNLATAERLVRAAHGKGANIILIQE 48 (301)
Q Consensus 9 ~kia~~Q~~~--------~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE 48 (301)
++|++++... ..+.++.++.+.+.|+.|++.|+.+|+...
T Consensus 78 L~i~~i~s~~~~~~i~~~~~~r~~~ie~~k~~i~~aa~lGi~~v~~nf 125 (386)
T 3bdk_A 78 LEITVIESIPVHEDIKQGKPNRDALIENYKTSIRNVGAAGIPVVCYNF 125 (386)
T ss_dssp CEEEEEECCCCCHHHHTTCTTHHHHHHHHHHHHHHHHTTTCCEEEECC
T ss_pred CEEEEEeccccccccccCcHHHHHHHHHHHHHHHHHHHcCCCEEEEcC
Confidence 6777765321 245788999999999999999999999643
No 47
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=48.59 E-value=36 Score=28.10 Aligned_cols=57 Identities=12% Similarity=-0.029 Sum_probs=35.6
Q ss_pred EEEEeccCCcHHHHHHHHHCCCcEEE--eecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEE
Q 022174 154 GVAICWDQWFPEAARAMVLQGAEILF--YPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVA 216 (301)
Q Consensus 154 g~~IC~D~~~pe~~~~~~~~gadlil--~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~ 216 (301)
.+++|-|. .++...++.++|+|+|+ +|..|.. +- ..... +..-....++++++.+..
T Consensus 37 ~I~~~lD~-t~~vi~eAi~~~adlIitHHP~~f~~-~~-~~i~~---~~~~~i~~li~~~I~ly~ 95 (247)
T 1nmo_A 37 KIVTGVTA-SQALLDEAVRLGADAVIVHHGYFWKG-ES-PVIRG---MKRNRLKTLLANDINLYG 95 (247)
T ss_dssp EEEEEEEC-CHHHHHHHHHTTCSEEEEEECSCCTT-SC-CCCCT---HHHHHHHHHHHTTCEEEE
T ss_pred EEEEEEcC-CHHHHHHHHhCCCCEEEECCchhccC-CC-ccccc---hHHHHHHHHHHCCCEEEE
Confidence 57778888 46678889999999999 5655411 11 11111 122334467888888754
No 48
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=48.32 E-value=77 Score=25.63 Aligned_cols=72 Identities=14% Similarity=0.114 Sum_probs=42.0
Q ss_pred eEEEEEeccc--CCCHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHh
Q 022174 9 VVVSALQFAC--TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKEL 86 (301)
Q Consensus 9 ~kia~~Q~~~--~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~ 86 (301)
+++..++... ....++..+.+.+.++.|++-|++.|++ .+|+.... .+..... +.+..+.+.|+++
T Consensus 65 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~----~~g~~~~~---~~~~~~~-----~~l~~l~~~a~~~ 132 (272)
T 2q02_A 65 LEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARALVL----CPLNDGTI---VPPEVTV-----EAIKRLSDLFARY 132 (272)
T ss_dssp CEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSEEEE----CCCCSSBC---CCHHHHH-----HHHHHHHHHHHTT
T ss_pred CeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCCEEEE----ccCCCchh---HHHHHHH-----HHHHHHHHHHHHc
Confidence 6675555422 1112456688899999999999998875 12221111 1111101 4567777788888
Q ss_pred CcEEee
Q 022174 87 GVVMPV 92 (301)
Q Consensus 87 ~i~iv~ 92 (301)
++.+.+
T Consensus 133 gv~l~~ 138 (272)
T 2q02_A 133 DIQGLV 138 (272)
T ss_dssp TCEEEE
T ss_pred CCEEEE
Confidence 887654
No 49
>4f1h_A Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA complex; HET: DNA; 1.66A {Danio rerio} PDB: 4fpv_A* 4f1h_B*
Probab=48.20 E-value=35 Score=26.63 Aligned_cols=40 Identities=10% Similarity=0.135 Sum_probs=27.2
Q ss_pred cceEEEEEeccc--CCCHHHHHHHHHHHHHHHHhCCCcEEEeccc
Q 022174 7 REVVVSALQFAC--TDDVSTNLATAERLVRAAHGKGANIILIQEL 49 (301)
Q Consensus 7 ~~~kia~~Q~~~--~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~ 49 (301)
.+|||.....+- ..+....++.+.+.|+ +.++|+|+|-|.
T Consensus 2 ~~l~v~t~Ni~g~~~~~~~~r~~~i~~~i~---~~~pDIi~LQEv 43 (250)
T 4f1h_A 2 SKLSIISWNVDGLDTLNLADRARGLCSYLA---LYTPDVVFLQEL 43 (250)
T ss_dssp CCEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEE
T ss_pred CeEEEEEEEeCCCCCcCHHHHHHHHHHHHH---HcCCCEEEEEeC
Confidence 467887777653 2345555666666665 448999999994
No 50
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=47.87 E-value=64 Score=27.39 Aligned_cols=65 Identities=17% Similarity=0.140 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCc-c------------chHHHhhcCCCCCChhHHHHHHHHHHhCcE
Q 022174 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQA-Q------------REDFFQRAKPYKDHPTILKMQELAKELGVV 89 (301)
Q Consensus 23 ~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~-~------------~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~ 89 (301)
+..++.+.+.++.|++-|++.|+-|=.+..|..... . ..+.++... +.+..+.+.|+++|+.
T Consensus 105 ~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~l~~~a~~~Gv~ 179 (335)
T 2qw5_A 105 QEALEYLKSRVDITAALGGEIMMGPIVIPYGVFPTTDFNEPIWSDELQEHLKVRYANAQ-----PILDKLGEYAEIKKVK 179 (335)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECCSSCTTCCCBCTTCCBCCHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEeccccCccccccCCcccccccccchhhhHHHHHHHHH-----HHHHHHHHHHHHcCCE
Confidence 456788999999999999999976532211211110 0 111122221 4567777888888887
Q ss_pred Eee
Q 022174 90 MPV 92 (301)
Q Consensus 90 iv~ 92 (301)
+.+
T Consensus 180 l~l 182 (335)
T 2qw5_A 180 LAI 182 (335)
T ss_dssp EEE
T ss_pred EEE
Confidence 655
No 51
>3tc3_A UV damage endonuclease; TIM-barrel, hydrolase; 1.50A {Sulfolobus acidocaldarius}
Probab=46.49 E-value=77 Score=27.16 Aligned_cols=66 Identities=9% Similarity=0.025 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEee
Q 022174 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (301)
Q Consensus 22 ~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~ 92 (301)
..+|++.+.++++.-.+++..+.=+.---+|.+........+.+.+. +.++.+.++|+++++-+.+
T Consensus 55 ~~~Nl~~l~~il~~n~~~~I~~yRiSS~l~P~~thp~~~~~~~~~~~-----~~l~~iG~~a~~~~iRLS~ 120 (310)
T 3tc3_A 55 SSSNLLCLKNILEWNLKHEILFFRISSNTIPLASHPKFHVNWKDKLS-----HILGDIGDFIKENSIRISM 120 (310)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEECCTTSSTTTTSTTCCCCHHHHTH-----HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEeCcccCCCccccccccchHHHHH-----HHHHHHHHHHHHcCcEEEe
Confidence 57899999999999999999887655544444333322222333332 5688899999999998865
No 52
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=46.46 E-value=62 Score=25.23 Aligned_cols=66 Identities=12% Similarity=0.124 Sum_probs=35.1
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEe
Q 022174 21 DVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMP 91 (301)
Q Consensus 21 ~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv 91 (301)
..+...+.+.++++.+++.++.+++..=.-...+..........+.. ..+-+.++++|+++++.++
T Consensus 99 ~~~~~~~~l~~ii~~~~~~~~~iil~~~~P~~~~~~~~~~~~~~~~i-----~~~n~~i~~~a~~~~v~~i 164 (209)
T 4hf7_A 99 NEDYTFGNIASMAELAKANKIKVILTSVLPAAEFPWRREIKDAPQKI-----QSLNARIEAYAKANKIPFV 164 (209)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEECCCCCSCCTTCTTCCCHHHHH-----HHHHHHHHHHHHHTTCCEE
T ss_pred cHHHHHHHHHHhhHHHhccCceEEEEeeeccCcccccccccchhHHH-----HHHHHHHHHHHHhcCCeEe
Confidence 45666777788888888888888764211111010000000001111 1345678888998887654
No 53
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=45.70 E-value=40 Score=27.58 Aligned_cols=76 Identities=13% Similarity=0.082 Sum_probs=45.3
Q ss_pred eEEEEEeccc-C-C---CHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHH
Q 022174 9 VVVSALQFAC-T-D---DVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELA 83 (301)
Q Consensus 9 ~kia~~Q~~~-~-~---~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a 83 (301)
+++..+.... . . +.++.++.+.+.++.|++-|+..|+++ ..++.. ....+.++.+. +.+..+.+.|
T Consensus 61 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~--~~p~~~--~~~~~~~~~~~-----~~l~~l~~~a 131 (281)
T 3u0h_A 61 LVLANLGLPLNLYDSEPVFLRELSLLPDRARLCARLGARSVTAF--LWPSMD--EEPVRYISQLA-----RRIRQVAVEL 131 (281)
T ss_dssp CEECCEECCSCTTSCHHHHHHHHHTHHHHHHHHHHTTCCEEEEE--CCSEES--SCHHHHHHHHH-----HHHHHHHHHH
T ss_pred CceEEecccccccCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEe--ecCCCC--CcchhhHHHHH-----HHHHHHHHHH
Confidence 5665555443 1 1 245667788899999999999999854 112111 10111222221 4567777888
Q ss_pred HHhCcEEeee
Q 022174 84 KELGVVMPVS 93 (301)
Q Consensus 84 ~~~~i~iv~G 93 (301)
+++|+.+.+=
T Consensus 132 ~~~Gv~l~lE 141 (281)
T 3u0h_A 132 LPLGMRVGLE 141 (281)
T ss_dssp GGGTCEEEEE
T ss_pred HHcCCEEEEE
Confidence 8889887653
No 54
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=44.08 E-value=35 Score=28.16 Aligned_cols=67 Identities=13% Similarity=0.197 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEecccccCcc--c-CCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeee
Q 022174 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYY--F-CQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (301)
Q Consensus 22 ~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~--~-~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G 93 (301)
.++.++.+.+.++.|++-|+..|+.|=....|. . ......+.++... +.+..+.+.|+++|+.+.+=
T Consensus 83 r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~-----~~l~~l~~~a~~~gv~l~lE 152 (290)
T 2qul_A 83 RDAGTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAI-----ESVRRVIKVAEDYGIIYALE 152 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHH-----HHHHTTHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHHH-----HHHHHHHHHHHHcCCEEEEE
Confidence 356678899999999999999988542111122 1 1111122222221 45677778888888876553
No 55
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=43.53 E-value=47 Score=26.93 Aligned_cols=70 Identities=17% Similarity=0.096 Sum_probs=38.2
Q ss_pred HHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeeeecCCCeeeEEEEEEcCC
Q 022174 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDAD 112 (301)
Q Consensus 33 i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~~~~~~~~yN~~~~i~~~ 112 (301)
|.+|...+++++++=|=. ....+... ....+.|++++++.+.+|++-+-..+--.+.+..+++ .+
T Consensus 156 iAral~~~p~llllDEPt------s~LD~~~~--------~~i~~~l~~l~~~~g~tvi~vtHd~~~~~~~d~i~~l-~~ 220 (235)
T 3tif_A 156 IARALANNPPIILADQPT------WALDSKTG--------EKIMQLLKKLNEEDGKTVVVVTHDINVARFGERIIYL-KD 220 (235)
T ss_dssp HHHHHTTCCSEEEEESTT------TTSCHHHH--------HHHHHHHHHHHHHHCCEEEEECSCHHHHTTSSEEEEE-ET
T ss_pred HHHHHHcCCCEEEEeCCc------ccCCHHHH--------HHHHHHHHHHHHHcCCEEEEEcCCHHHHHhCCEEEEE-EC
Confidence 444555677777777722 11111111 1456778888777666666543211111345677788 58
Q ss_pred CCeec
Q 022174 113 GSDLG 117 (301)
Q Consensus 113 G~i~~ 117 (301)
|+++.
T Consensus 221 G~i~~ 225 (235)
T 3tif_A 221 GEVER 225 (235)
T ss_dssp TEEEE
T ss_pred CEEEE
Confidence 98764
No 56
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=42.77 E-value=1.6e+02 Score=25.31 Aligned_cols=38 Identities=8% Similarity=0.160 Sum_probs=28.9
Q ss_pred eEEEEEeccc-C-------CCHHHHHHHHHHHHHHHHhCCCcEEEe
Q 022174 9 VVVSALQFAC-T-------DDVSTNLATAERLVRAAHGKGANIILI 46 (301)
Q Consensus 9 ~kia~~Q~~~-~-------~~~~~n~~~~~~~i~~A~~~~~dlvvf 46 (301)
+++.++.... . ...++.++.+.+.++.|++.|+.+|++
T Consensus 69 L~i~~~~~~~~~~~~~~~~~~r~~~i~~~~~~i~~a~~lG~~~v~~ 114 (367)
T 1tz9_A 69 LALLGIESVAIHDAIKAGTDQRDHYIDNYRQTLRNLGKCGISLVCY 114 (367)
T ss_dssp CEEEEECSCCCCHHHHHTCSTHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEEecCCCcHHHhcCCcCHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 5666655332 1 346778889999999999999999998
No 57
>3teb_A Endonuclease/exonuclease/phosphatase; PSI-biology, MCSG, midwest center for structural genomics; 2.99A {Leptotrichia buccalis c-1013-b}
Probab=41.87 E-value=45 Score=26.81 Aligned_cols=41 Identities=12% Similarity=0.237 Sum_probs=28.3
Q ss_pred cceEEEEEeccc--CCCHHHHHHHHHHHHHHHHhCCCcEEEecccc
Q 022174 7 REVVVSALQFAC--TDDVSTNLATAERLVRAAHGKGANIILIQELF 50 (301)
Q Consensus 7 ~~~kia~~Q~~~--~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~ 50 (301)
++|||+...... ..+....++++.+.|++ .++|+|+|-|..
T Consensus 2 ~~l~v~t~Ni~~~~~~~~~~~~~~i~~~i~~---~~~DIi~LQEv~ 44 (266)
T 3teb_A 2 NAMKILTVNVHAWLEENQMEKIDILARTIAE---KQYDVIAMQEVN 44 (266)
T ss_dssp -CEEEEEEECCTTCSTTHHHHHHHHHHHHHH---HTCSEEEEEEEE
T ss_pred CceEEEEEecccccCcchhHHHHHHHHHHHh---cCCCEEEEEEcc
Confidence 467887777754 23555666666666654 489999999975
No 58
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=41.85 E-value=68 Score=28.43 Aligned_cols=72 Identities=17% Similarity=0.133 Sum_probs=47.1
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEe----cccccCccc--CC-----c-cchHHHhhcCCCCCChhHHHHHHHHHHhCc
Q 022174 21 DVSTNLATAERLVRAAHGKGANIILI----QELFEGYYF--CQ-----A-QREDFFQRAKPYKDHPTILKMQELAKELGV 88 (301)
Q Consensus 21 ~~~~n~~~~~~~i~~A~~~~~dlvvf----PE~~l~g~~--~~-----~-~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i 88 (301)
+-...++...++++.|++.|||.|=| |+..++.+. .. . ...+.++.++ .+.+++..|.+.|++.|+
T Consensus 38 NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~--l~~e~~~~L~~~~~~~Gi 115 (385)
T 1vli_A 38 NHDGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSME--MPAEWILPLLDYCREKQV 115 (385)
T ss_dssp TTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBS--SCGGGHHHHHHHHHHTTC
T ss_pred cccccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcC--CCHHHHHHHHHHHHHcCC
Confidence 34456788889999999999999887 555444432 10 0 0112222222 134789999999999999
Q ss_pred EEeeee
Q 022174 89 VMPVSF 94 (301)
Q Consensus 89 ~iv~G~ 94 (301)
.++...
T Consensus 116 ~~~stp 121 (385)
T 1vli_A 116 IFLSTV 121 (385)
T ss_dssp EEECBC
T ss_pred cEEEcc
Confidence 998664
No 59
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=39.43 E-value=37 Score=28.69 Aligned_cols=64 Identities=13% Similarity=0.081 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecccccC-cccCCc-cchHHHhhcCCCCCChhHHHHHHHHHHhCcE-Ee
Q 022174 23 STNLATAERLVRAAHGKGANIILIQELFEG-YYFCQA-QREDFFQRAKPYKDHPTILKMQELAKELGVV-MP 91 (301)
Q Consensus 23 ~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~-g~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~-iv 91 (301)
+..++.+.+.++.|++-|+..|+.|=.+.+ +..... ...+.++... +.+..+.+.|+++|+. +.
T Consensus 110 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~l~~l~~~a~~~Gv~~l~ 176 (316)
T 3qxb_A 110 SLGYQHLKRAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIAR-----DMWIELAAYAKRQGLSMLY 176 (316)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHHH-----HHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHHH-----HHHHHHHHHHHhcCCeEEE
Confidence 466788899999999999999987643311 111111 1111122221 4567778888888887 54
No 60
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=39.08 E-value=1.1e+02 Score=24.91 Aligned_cols=69 Identities=10% Similarity=0.120 Sum_probs=39.3
Q ss_pred HHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeeeecC-CCeeeEEEEEEc
Q 022174 32 LVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEA-NNAHYNSIAIID 110 (301)
Q Consensus 32 ~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~~~~-~~~~yN~~~~i~ 110 (301)
.|..|...+++++++=|=. ....+...+ ...+.|++++++ +..|++-+-..+ -..+-+..+++
T Consensus 163 ~iAraL~~~p~lllLDEPt------s~LD~~~~~--------~l~~~l~~l~~~-g~tvi~vtHd~~~~~~~~d~v~~l- 226 (257)
T 1g6h_A 163 EIGRALMTNPKMIVMDEPI------AGVAPGLAH--------DIFNHVLELKAK-GITFLIIEHRLDIVLNYIDHLYVM- 226 (257)
T ss_dssp HHHHHHHTCCSEEEEESTT------TTCCHHHHH--------HHHHHHHHHHHT-TCEEEEECSCCSTTGGGCSEEEEE-
T ss_pred HHHHHHHcCCCEEEEeCCc------cCCCHHHHH--------HHHHHHHHHHHC-CCEEEEEecCHHHHHHhCCEEEEE-
Confidence 4455666788999999922 222222211 456677777665 666655432211 12456677788
Q ss_pred CCCCee
Q 022174 111 ADGSDL 116 (301)
Q Consensus 111 ~~G~i~ 116 (301)
.+|+++
T Consensus 227 ~~G~i~ 232 (257)
T 1g6h_A 227 FNGQII 232 (257)
T ss_dssp ETTEEE
T ss_pred ECCEEE
Confidence 488875
No 61
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=38.78 E-value=56 Score=27.65 Aligned_cols=65 Identities=14% Similarity=0.032 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecccccCc-----ccCC--ccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEee
Q 022174 23 STNLATAERLVRAAHGKGANIILIQELFEGY-----YFCQ--AQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (301)
Q Consensus 23 ~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g-----~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~ 92 (301)
++.++.+.+.++.|++-|++.|+++=....+ +... ....+.++.+. +.+..+.+.|+++|+.+.+
T Consensus 107 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~l~~~a~~~Gv~l~l 178 (340)
T 2zds_A 107 QRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFA-----DRWNPILDVFDAEGVRFAH 178 (340)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHH-----HHHHHHHHHHHHcCCEEEE
Confidence 4567888999999999999998874211110 0000 00111122111 4567778888888887655
No 62
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=38.60 E-value=93 Score=25.57 Aligned_cols=64 Identities=13% Similarity=0.132 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecccccCccc---C-CccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeee
Q 022174 23 STNLATAERLVRAAHGKGANIILIQELFEGYYF---C-QAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (301)
Q Consensus 23 ~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~---~-~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G 93 (301)
+..++.+.+.++.|++-|++.|+.+= .+|+. . .....+.++... +.+..+.+.|+++|+.+.+=
T Consensus 84 ~~~~~~~~~~i~~a~~lG~~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~-----~~l~~l~~~a~~~Gv~l~lE 151 (294)
T 3vni_A 84 KNAKAFYTDLLKRLYKLDVHLIGGAL--YSYWPIDYTKTIDKKGDWERSV-----ESVREVAKVAEACGVDFCLE 151 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEST--TSCSSCCTTSCCCHHHHHHHHH-----HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCeeeccc--cCCCCCcCCCCCCHHHHHHHHH-----HHHHHHHHHHHHcCCEEEEE
Confidence 46778889999999999999996421 11221 1 111122222222 56777888888888876543
No 63
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=38.16 E-value=61 Score=24.36 Aligned_cols=69 Identities=7% Similarity=0.083 Sum_probs=41.3
Q ss_pred EEEEEeccc-----CCCHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHH
Q 022174 10 VVSALQFAC-----TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAK 84 (301)
Q Consensus 10 kia~~Q~~~-----~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~ 84 (301)
.+.++++.. ..+.++..+.+.++++.+++.++.+++.-= .++... ..+.. ..+.+.++++|+
T Consensus 68 d~vvi~~G~ND~~~~~~~~~~~~~~~~~i~~~~~~~~~vvl~~~-~~p~~~----~~~~~--------~~~~~~~~~~a~ 134 (185)
T 3hp4_A 68 THVLIELGANDGLRGFPVKKMQTNLTALVKKSQAANAMTALMEI-YIPPNY----GPRYS--------KMFTSSFTQISE 134 (185)
T ss_dssp SEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHHTTCEEEEECC-CCCSTT----CHHHH--------HHHHHHHHHHHH
T ss_pred CEEEEEeecccCCCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeC-CCCCcc----cHHHH--------HHHHHHHHHHHH
Confidence 456666554 134566677777778777778888876521 111110 11111 156678899999
Q ss_pred HhCcEEe
Q 022174 85 ELGVVMP 91 (301)
Q Consensus 85 ~~~i~iv 91 (301)
++++.++
T Consensus 135 ~~~~~~v 141 (185)
T 3hp4_A 135 DTNAHLM 141 (185)
T ss_dssp HHCCEEE
T ss_pred HcCCEEE
Confidence 9887765
No 64
>4gz1_A Tyrosyl-DNA phosphodiesterase 2; protein-DNA complex, DNA repair, 5'-DNA END processing, endonuclease/exonuclease/phosphatase domain; HET: DNA EPE; 1.50A {Mus musculus} PDB: 4gyz_A* 4gz0_A* 4gz2_A*
Probab=38.16 E-value=24 Score=28.09 Aligned_cols=40 Identities=5% Similarity=0.076 Sum_probs=25.7
Q ss_pred cceEEEEEeccc--CCCHHHHHHHHHHHHHHHHhCCCcEEEeccc
Q 022174 7 REVVVSALQFAC--TDDVSTNLATAERLVRAAHGKGANIILIQEL 49 (301)
Q Consensus 7 ~~~kia~~Q~~~--~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~ 49 (301)
.+|||.....+- ..+.....+.+.+.|+ +.++|+|+|-|.
T Consensus 8 ~~l~v~swNi~g~~~~~~~~r~~~i~~~i~---~~~pDIi~LQEv 49 (256)
T 4gz1_A 8 STISFITWNIDGLDGCNLPERARGVCSCLA---LYSPDVVFLQEV 49 (256)
T ss_dssp GEEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEE
T ss_pred CcEEEEEEEcCCCcCcCHHHHHHHHHHHHH---HcCCCEEEEEcC
Confidence 356666666653 2345555566666665 448999999994
No 65
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=36.92 E-value=1.3e+02 Score=25.13 Aligned_cols=71 Identities=14% Similarity=0.226 Sum_probs=38.1
Q ss_pred HHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcE--EeeeeeecCCCeeeEEEEEE
Q 022174 32 LVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVV--MPVSFFEEANNAHYNSIAII 109 (301)
Q Consensus 32 ~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~--iv~G~~~~~~~~~yN~~~~i 109 (301)
.|.+|...+++++++=|=. ..+.....+ ...+.|++++++..+. |++..-...-..+.+..+++
T Consensus 171 ~lAraL~~~p~lLlLDEPt------s~LD~~~~~--------~l~~~l~~l~~~g~tv~~iivtHd~~~~~~~~d~v~~l 236 (279)
T 2ihy_A 171 MIARALMGQPQVLILDEPA------AGLDFIARE--------SLLSILDSLSDSYPTLAMIYVTHFIEEITANFSKILLL 236 (279)
T ss_dssp HHHHHHHTCCSEEEEESTT------TTCCHHHHH--------HHHHHHHHHHHHCTTCEEEEEESCGGGCCTTCCEEEEE
T ss_pred HHHHHHhCCCCEEEEeCCc------cccCHHHHH--------HHHHHHHHHHHCCCEEEEEEEecCHHHHHHhCCEEEEE
Confidence 3445556788888888822 222222211 4456777776662233 44443222222456677788
Q ss_pred cCCCCeec
Q 022174 110 DADGSDLG 117 (301)
Q Consensus 110 ~~~G~i~~ 117 (301)
.+|+++.
T Consensus 237 -~~G~i~~ 243 (279)
T 2ihy_A 237 -KDGQSIQ 243 (279)
T ss_dssp -ETTEEEE
T ss_pred -ECCEEEE
Confidence 5888763
No 66
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=35.86 E-value=32 Score=29.59 Aligned_cols=23 Identities=22% Similarity=0.189 Sum_probs=19.0
Q ss_pred eeEEEEEEcCCCCeecccccccC
Q 022174 102 HYNSIAIIDADGSDLGLYRKSHI 124 (301)
Q Consensus 102 ~yN~~~~i~~~G~i~~~~~K~~l 124 (301)
.+-+.++||++|.|...|++...
T Consensus 101 ~~r~tfiId~~G~i~~~~~~v~~ 123 (322)
T 4eo3_A 101 TVRSTFLIDRWGFVRKEWRRVKV 123 (322)
T ss_dssp ECCEEEEECTTSBEEEEEESCCS
T ss_pred CccEEEEECCCCEEEEEEeCCCc
Confidence 44578999999999988998764
No 67
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A
Probab=34.48 E-value=31 Score=30.38 Aligned_cols=64 Identities=11% Similarity=0.089 Sum_probs=38.8
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcE
Q 022174 21 DVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVV 89 (301)
Q Consensus 21 ~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~ 89 (301)
+..+|++.+.+.++..++.|..++||||..=+--...+ ..+ ...++. ....+-+..+|.+.++.
T Consensus 204 ~~r~n~ksl~~~~~~Lk~GG~sI~IFPEGTRsR~~~~~--g~l--~~~~Fk-~gs~~~~~~LA~ksg~P 267 (367)
T 1iuq_A 204 KRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPST--GEW--YPAPFD-ASSVDNMRRLIQHSDVP 267 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTT--CCB--CCCCCC-HHHHHHHHHHHHTSSSC
T ss_pred hhHHHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCCCC--Ccc--cccccc-chhhhHHHHHHHHcCCC
Confidence 45578888888888888778999999995321100000 000 011122 24667788999987766
No 68
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=34.19 E-value=37 Score=32.30 Aligned_cols=70 Identities=10% Similarity=0.003 Sum_probs=40.3
Q ss_pred HHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeee-ecC-CCeeeEEEEEEcC
Q 022174 34 RAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF-EEA-NNAHYNSIAIIDA 111 (301)
Q Consensus 34 ~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~-~~~-~~~~yN~~~~i~~ 111 (301)
+.+..+|||+|+-|=.+.-. ... . ..+...++..|.+++++++.... -.+ +...|....+|.|
T Consensus 176 r~la~~GAdii~~psas~~~--~gk--~-----------~~~~~l~~~rA~e~~~~vv~aN~~G~~~~~~~f~G~S~I~p 240 (634)
T 3ilv_A 176 IRHYEKGATLVLNPSASHFA--FGK--S-----------AIRYDLVIGGSERFDCTYVYANLLGNEAGRMIYDGEVLIAH 240 (634)
T ss_dssp --CGGGTCSEEEEEECCBCC--TTH--H-----------HHHHHHHHHHHHHTTSEEEEEECEEESSSSCEEECCEEEEE
T ss_pred HHHHHCCCcEEEEecCCccc--cCc--H-----------HHHHHHHHHHHHHhCCEEEEEcCccCCCCceEEcceEEEEc
Confidence 34456799999999754211 000 0 13445677788999999985432 122 2344544334459
Q ss_pred CCCeecc
Q 022174 112 DGSDLGL 118 (301)
Q Consensus 112 ~G~i~~~ 118 (301)
+|+++..
T Consensus 241 ~G~vla~ 247 (634)
T 3ilv_A 241 KGKLIQR 247 (634)
T ss_dssp TTEEEEE
T ss_pred CCeEEEE
Confidence 9998753
No 69
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=33.68 E-value=1.3e+02 Score=24.96 Aligned_cols=58 Identities=10% Similarity=0.096 Sum_probs=35.9
Q ss_pred EEEEeccCCcHHHHHHHHHCCCcEEEe--ecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEE
Q 022174 154 GVAICWDQWFPEAARAMVLQGAEILFY--PTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVA 216 (301)
Q Consensus 154 g~~IC~D~~~pe~~~~~~~~gadlil~--p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~ 216 (301)
.+++|-|. .++...++..+|||+|+. |..|. +...- ....+..-....++++++.+..
T Consensus 40 ~I~~alD~-t~~vi~eAi~~gadlIitHHP~~f~--~~~~~--~~~~~~~~~i~~li~~~I~lya 99 (267)
T 2fyw_A 40 RVMVALDI-REETVAEAIEKGVDLIIVKHAPIFR--PIKDL--LASRPQNQIYIDLIKHDIAVYV 99 (267)
T ss_dssp EEEEESCC-CHHHHHHHHHTTCSEEEESSCSCCS--CCCCC--CTTSHHHHHHHHHHHTTCEEEE
T ss_pred EEEEEEcC-CHHHHHHHHHCCCCEEEECCccccC--Ccccc--ccCchHHHHHHHHHHCCCeEEE
Confidence 57789998 467778899999999994 55441 11111 0122223334467788888754
No 70
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=33.26 E-value=1.6e+02 Score=24.26 Aligned_cols=69 Identities=7% Similarity=0.128 Sum_probs=39.0
Q ss_pred HHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeeeecC-CCeeeEEEEEEc
Q 022174 32 LVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEA-NNAHYNSIAIID 110 (301)
Q Consensus 32 ~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~~~~-~~~~yN~~~~i~ 110 (301)
.+..|...+++++++=|=. ........+ ...+.|++++++ +..|++-+-..+ -..+.+..+++
T Consensus 148 ~lAraL~~~p~lllLDEPt------s~LD~~~~~--------~l~~~l~~l~~~-g~tii~vtHd~~~~~~~~d~v~~l- 211 (266)
T 2yz2_A 148 AIASVIVHEPDILILDEPL------VGLDREGKT--------DLLRIVEKWKTL-GKTVILISHDIETVINHVDRVVVL- 211 (266)
T ss_dssp HHHHHHTTCCSEEEEESTT------TTCCHHHHH--------HHHHHHHHHHHT-TCEEEEECSCCTTTGGGCSEEEEE-
T ss_pred HHHHHHHcCCCEEEEcCcc------ccCCHHHHH--------HHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEE-
Confidence 4555666788999998822 222222221 455677777666 655554432211 12356677777
Q ss_pred CCCCee
Q 022174 111 ADGSDL 116 (301)
Q Consensus 111 ~~G~i~ 116 (301)
.+|+++
T Consensus 212 ~~G~i~ 217 (266)
T 2yz2_A 212 EKGKKV 217 (266)
T ss_dssp ETTEEE
T ss_pred ECCEEE
Confidence 488875
No 71
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=32.77 E-value=83 Score=25.43 Aligned_cols=57 Identities=11% Similarity=0.151 Sum_probs=37.8
Q ss_pred eEEEEEecccCCCHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCc
Q 022174 9 VVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGV 88 (301)
Q Consensus 9 ~kia~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i 88 (301)
+++..+...... ..+.+.+.++.|++-|++.|+++- | .+.++.+.+.|+++++
T Consensus 77 l~i~~~~~~~~~----~~~~~~~~i~~A~~lGa~~v~~~~----~-------------------~~~~~~l~~~a~~~gv 129 (262)
T 3p6l_A 77 IKIVGTGVYVAE----KSSDWEKMFKFAKAMDLEFITCEP----A-------------------LSDWDLVEKLSKQYNI 129 (262)
T ss_dssp CEEEEEEEECCS----STTHHHHHHHHHHHTTCSEEEECC----C-------------------GGGHHHHHHHHHHHTC
T ss_pred CeEEEEeccCCc----cHHHHHHHHHHHHHcCCCEEEecC----C-------------------HHHHHHHHHHHHHhCC
Confidence 555555544321 234577788888888998888762 2 0334678889999998
Q ss_pred EEee
Q 022174 89 VMPV 92 (301)
Q Consensus 89 ~iv~ 92 (301)
.+.+
T Consensus 130 ~l~~ 133 (262)
T 3p6l_A 130 KISV 133 (262)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
No 72
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=31.81 E-value=1.4e+02 Score=26.16 Aligned_cols=64 Identities=13% Similarity=0.041 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEecccccCcccC--CccchHHHhhcCCCCCChhHHHHHHHHHHhC--cEEee
Q 022174 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFC--QAQREDFFQRAKPYKDHPTILKMQELAKELG--VVMPV 92 (301)
Q Consensus 23 ~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~--i~iv~ 92 (301)
++.++.+.+.++.|++-|++.|++.=.. .|+.. .....+.++.+. +.+..+.+.|++++ +.+.+
T Consensus 112 ~~~i~~~~~~i~~A~~LGa~~vvv~~G~-~g~~~~~~~~~~~~~~~~~-----e~L~~l~~~A~~~G~~v~l~l 179 (394)
T 1xla_A 112 RFALAKVLHNIDLAAEMGAETFVMWGGR-EGSEYDGSKDLAAALDRMR-----EGVDTAAGYIKDKGYNLRIAL 179 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECCTT-CEESSGGGCCHHHHHHHHH-----HHHHHHHHHHHHHTCCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEECCCC-CccccccccCHHHHHHHHH-----HHHHHHHHHHHhcCCCeEEEE
Confidence 5678889999999999999988763111 11100 011111222221 46677788888888 77665
No 73
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=31.13 E-value=78 Score=25.34 Aligned_cols=41 Identities=10% Similarity=0.084 Sum_probs=22.5
Q ss_pred hhHHHHHHHHHHhCcEEeeeeeecCCCeeeEEEEEEcCCCCee
Q 022174 74 PTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDL 116 (301)
Q Consensus 74 ~~~~~l~~~a~~~~i~iv~G~~~~~~~~~yN~~~~i~~~G~i~ 116 (301)
...+.|.+++++ +..|++-+-..+.-.+.+..+++ .+|+++
T Consensus 178 ~~~~~l~~l~~~-g~tvi~vtHd~~~~~~~d~v~~l-~~G~i~ 218 (224)
T 2pcj_A 178 RVMDIFLKINEG-GTSIVMVTHERELAELTHRTLEM-KDGKVV 218 (224)
T ss_dssp HHHHHHHHHHHT-TCEEEEECSCHHHHTTSSEEEEE-ETTEEE
T ss_pred HHHHHHHHHHHC-CCEEEEEcCCHHHHHhCCEEEEE-ECCEEE
Confidence 345677777666 55555443211111345667777 578765
No 74
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=30.98 E-value=1.8e+02 Score=24.10 Aligned_cols=71 Identities=10% Similarity=0.145 Sum_probs=38.9
Q ss_pred HHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeeeecC-CCeeeEEEEEEc
Q 022174 32 LVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEA-NNAHYNSIAIID 110 (301)
Q Consensus 32 ~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~~~~-~~~~yN~~~~i~ 110 (301)
.|..|...+++++++=|=. ..+.+.... ...+.|++++++.+.+|++-+-..+ -..+-+..+++
T Consensus 153 ~iAraL~~~P~lLlLDEPt------s~LD~~~~~--------~i~~~l~~l~~~~g~tvi~vtHdl~~~~~~~drv~~l- 217 (275)
T 3gfo_A 153 AIAGVLVMEPKVLILDEPT------AGLDPMGVS--------EIMKLLVEMQKELGITIIIATHDIDIVPLYCDNVFVM- 217 (275)
T ss_dssp HHHHHHTTCCSEEEEECTT------TTCCHHHHH--------HHHHHHHHHHHHHCCEEEEEESCCSSGGGGCSEEEEE-
T ss_pred HHHHHHHcCCCEEEEECcc------ccCCHHHHH--------HHHHHHHHHHhhCCCEEEEEecCHHHHHHhCCEEEEE-
Confidence 3444555678888888822 111121111 4567778877444666665432211 12355677788
Q ss_pred CCCCeec
Q 022174 111 ADGSDLG 117 (301)
Q Consensus 111 ~~G~i~~ 117 (301)
.+|+++.
T Consensus 218 ~~G~i~~ 224 (275)
T 3gfo_A 218 KEGRVIL 224 (275)
T ss_dssp ETTEEEE
T ss_pred ECCEEEE
Confidence 5888763
No 75
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=30.58 E-value=1.7e+02 Score=21.97 Aligned_cols=26 Identities=15% Similarity=0.042 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEec
Q 022174 22 VSTNLATAERLVRAAHGKGANIILIQ 47 (301)
Q Consensus 22 ~~~n~~~~~~~i~~A~~~~~dlvvfP 47 (301)
....+..+.++.++-+++++.+|...
T Consensus 67 C~~el~~l~~l~~~~~~~~~~vv~Vs 92 (179)
T 3ixr_A 67 SSTEGLEFNLLLPQFEQINATVLGVS 92 (179)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred hHHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 45556677777777777788887664
No 76
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=30.55 E-value=1.4e+02 Score=25.75 Aligned_cols=65 Identities=15% Similarity=0.188 Sum_probs=46.9
Q ss_pred CceEEEEEeccC-CcHHHHHHHHHCCCcEEEeecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEEecCccc
Q 022174 150 FAKIGVAICWDQ-WFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGK 222 (301)
Q Consensus 150 ~~~ig~~IC~D~-~~pe~~~~~~~~gadlil~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~~n~~G~ 222 (301)
.-++.++-+|-- ..+++.+.+...|++=|+.-+. +. ...+ ..|.. .-.+|.+.|++|+.+.+++.
T Consensus 220 ~~~V~il~~~pG~~~~~~l~a~~~~g~~GiVle~~-G~-----Gn~p-~~~~~-~l~~a~~~Gi~VV~~Src~~ 285 (334)
T 3nxk_A 220 LPKVDILYSYSNDGSGVAAKALFEHGTKGIVVAGS-GA-----GSIH-KNQKD-VLKELLKKGLKVVVSSRVVA 285 (334)
T ss_dssp CCCEEEEECCTTCCHHHHHHHHHHTTCCEEEEEEB-TT-----TBCC-HHHHH-HHHHHHTTTCEEEEEESSSB
T ss_pred CCcEEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeE-CC-----CCCc-HHHHH-HHHHHHHCCCEEEEeCCCCC
Confidence 347999999998 8999999888899998887654 11 1112 23333 33367889999999999873
No 77
>2gx8_A NIF3-related protein; structural genomics, unknown function, protein structure initiative, midwest center for structural genomics, MCSG; HET: EPE; 2.20A {Bacillus cereus} SCOP: c.135.1.1
Probab=30.37 E-value=1.2e+02 Score=27.03 Aligned_cols=59 Identities=19% Similarity=0.194 Sum_probs=38.8
Q ss_pred EEEEeccCCcHHHHHHHHHCCCcEEE--eecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEEe
Q 022174 154 GVAICWDQWFPEAARAMVLQGAEILF--YPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVAS 217 (301)
Q Consensus 154 g~~IC~D~~~pe~~~~~~~~gadlil--~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~~ 217 (301)
.+++|-|. .++...++..+|||+|+ +|.-|. |... .....|..-...++++|++.+..+
T Consensus 66 ~Vl~alD~-t~~Vv~eAi~~gadlIItHHPlif~--~lk~--i~~~~~~~r~i~~li~~~Iavya~ 126 (397)
T 2gx8_A 66 HVLIALDV-TEEVVDEAIQLGANVIIAHHPLIFN--PLKA--IHTDKAYGKIIEKCIKNDIAIYAA 126 (397)
T ss_dssp EEEEESSC-CHHHHHHHHHHTCCEEEESSCSCCS--CCSC--CCTTSHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcC-CHHHHHHHHHCCCCEEEECCccccC--Cccc--cCcCcHHHHHHHHHHHCCCeEEEe
Confidence 67889998 57788999999999999 455431 1111 112233444455788999988543
No 78
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=30.14 E-value=1.7e+02 Score=21.86 Aligned_cols=69 Identities=13% Similarity=0.056 Sum_probs=41.3
Q ss_pred EEEEEecccC-----CCHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHH
Q 022174 10 VVSALQFACT-----DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAK 84 (301)
Q Consensus 10 kia~~Q~~~~-----~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~ 84 (301)
.+.++++... .+.++..+.+.++++.+++.++.+++.--. .+.. ....+. ..+.+.++++|+
T Consensus 64 d~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~~~-~p~~----~~~~~~--------~~~n~~~~~~a~ 130 (190)
T 1ivn_A 64 RWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQIR-LPAN----YGRRYN--------EAFSAIYPKLAK 130 (190)
T ss_dssp SEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECCC-CCGG----GCHHHH--------HHHHHHHHHHHH
T ss_pred CEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEecc-CCcc----hhHHHH--------HHHHHHHHHHHH
Confidence 5667776651 256667777777777777778888776211 1110 011111 145677888999
Q ss_pred HhCcEEe
Q 022174 85 ELGVVMP 91 (301)
Q Consensus 85 ~~~i~iv 91 (301)
++++.++
T Consensus 131 ~~~v~~i 137 (190)
T 1ivn_A 131 EFDVPLL 137 (190)
T ss_dssp HTTCCEE
T ss_pred HcCCeEE
Confidence 8877654
No 79
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=29.42 E-value=87 Score=25.26 Aligned_cols=45 Identities=13% Similarity=0.096 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEee
Q 022174 25 NLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (301)
Q Consensus 25 n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~ 92 (301)
..+.+.+.++.|++-|+..|+++ ++ .+.+..+.+.|+++++.+.+
T Consensus 87 ~~~~~~~~i~~A~~lGa~~v~~~----p~-------------------~~~l~~l~~~a~~~gv~l~l 131 (257)
T 3lmz_A 87 SEEEIDRAFDYAKRVGVKLIVGV----PN-------------------YELLPYVDKKVKEYDFHYAI 131 (257)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEE----EC-------------------GGGHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEec----CC-------------------HHHHHHHHHHHHHcCCEEEE
Confidence 35666777777777788777763 11 14567888999999988664
No 80
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=29.41 E-value=1.5e+02 Score=21.74 Aligned_cols=25 Identities=4% Similarity=-0.082 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEe
Q 022174 22 VSTNLATAERLVRAAHGKGANIILI 46 (301)
Q Consensus 22 ~~~n~~~~~~~i~~A~~~~~dlvvf 46 (301)
....+..+.++.++-.+.++.+|..
T Consensus 45 C~~~~~~l~~~~~~~~~~~v~vv~v 69 (161)
T 3drn_A 45 STREASAFRDNWDLLKDYDVVVIGV 69 (161)
T ss_dssp HHHHHHHHHHTHHHHHTTCEEEEEE
T ss_pred hHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 3445555666666656666766655
No 81
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=29.08 E-value=1.4e+02 Score=24.28 Aligned_cols=56 Identities=13% Similarity=-0.081 Sum_probs=35.4
Q ss_pred EEEEeccCCcHHHHHHHHHCCCcEEE--eecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEE
Q 022174 154 GVAICWDQWFPEAARAMVLQGAEILF--YPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVA 216 (301)
Q Consensus 154 g~~IC~D~~~pe~~~~~~~~gadlil--~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~ 216 (301)
.+++|-|. .++..+++..+|||+|+ +|..|+. ..- ...+..-....++++++.+..
T Consensus 38 ~I~~alD~-t~~vi~eAi~~~adlIitHHp~~f~~---~~~---~~~~~~~~i~~li~~~I~ly~ 95 (242)
T 2yyb_A 38 KVGAAVDA-GEAIFRKALEEEVDFLIVHHGLFWGK---PFP---IVGHHKRRLETLFQGGINLYA 95 (242)
T ss_dssp CEEEEEEC-SHHHHHHHHHTTCSEEEEEECSCSSC---CCC---SCHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEEEcC-CHHHHHHHHHCCCCEEEECCCcCcCc---ccc---cccHHHHHHHHHHHCCCeEEE
Confidence 46678887 46777889999999999 5655511 111 122333334467788887754
No 82
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=29.03 E-value=76 Score=27.69 Aligned_cols=71 Identities=20% Similarity=0.216 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEe----cccccCccc--CC-----ccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEe
Q 022174 23 STNLATAERLVRAAHGKGANIILI----QELFEGYYF--CQ-----AQREDFFQRAKPYKDHPTILKMQELAKELGVVMP 91 (301)
Q Consensus 23 ~~n~~~~~~~i~~A~~~~~dlvvf----PE~~l~g~~--~~-----~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv 91 (301)
...++...++++.|++.|+|.|=| |+..++.+. .. ....+.++.++ .+.+++..|.+.|++.|+.++
T Consensus 31 ~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~--l~~e~~~~L~~~~~~~Gi~~~ 108 (349)
T 2wqp_A 31 EGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCA--LNEEDEIKLKEYVESKGMIFI 108 (349)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHC--CCHHHHHHHHHHHHHTTCEEE
T ss_pred cCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhC--CCHHHHHHHHHHHHHhCCeEE
Confidence 456788889999999999999877 333323322 00 00112233332 124789999999999999988
Q ss_pred eeee
Q 022174 92 VSFF 95 (301)
Q Consensus 92 ~G~~ 95 (301)
....
T Consensus 109 st~~ 112 (349)
T 2wqp_A 109 STLF 112 (349)
T ss_dssp EEEC
T ss_pred EeeC
Confidence 7643
No 83
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=28.50 E-value=1.7e+02 Score=21.26 Aligned_cols=26 Identities=19% Similarity=0.187 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEec
Q 022174 22 VSTNLATAERLVRAAHGKGANIILIQ 47 (301)
Q Consensus 22 ~~~n~~~~~~~i~~A~~~~~dlvvfP 47 (301)
....+..+.++.++-+++++.+|...
T Consensus 51 C~~~~~~l~~~~~~~~~~~~~vv~vs 76 (163)
T 3gkn_A 51 ATTEGLDFNALLPEFDKAGAKILGVS 76 (163)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 45566677777777677788887664
No 84
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=28.40 E-value=1.6e+02 Score=25.29 Aligned_cols=65 Identities=18% Similarity=0.137 Sum_probs=46.9
Q ss_pred CceEEEEEeccCCcHHHHHHHHHCCCcEEEeecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEEecCccc
Q 022174 150 FAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGK 222 (301)
Q Consensus 150 ~~~ig~~IC~D~~~pe~~~~~~~~gadlil~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~~n~~G~ 222 (301)
.-++.++-+|=-..+++.+.+...|++=|+.-.. +. ...+ ..|.. .-.+|.+.|++|+.+.+++.
T Consensus 217 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~-G~-----Gn~p-~~~~~-~l~~a~~~Gi~VV~~Sr~~~ 281 (327)
T 1o7j_A 217 LPKVDILYGYQDDPEYLYDAAIQHGVKGIVYAGM-GA-----GSVS-VRGIA-GMRKALEKGVVVMRSTRTGN 281 (327)
T ss_dssp CCCEEEEECCTTCCTHHHHHHHHTTCSEEEEEEB-TT-----TBCC-HHHHH-HHHHHHHTTCEEEEEESSSB
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeE-CC-----CCCC-HHHHH-HHHHHHHCCceEEEECCCCC
Confidence 3589999999999999999888889998887554 11 1112 33333 23357889999999999863
No 85
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=28.31 E-value=1.6e+02 Score=25.35 Aligned_cols=65 Identities=20% Similarity=0.228 Sum_probs=47.1
Q ss_pred CceEEEEEeccCCcHHHHHHHHHCCCcEEEeecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEEecCccc
Q 022174 150 FAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGK 222 (301)
Q Consensus 150 ~~~ig~~IC~D~~~pe~~~~~~~~gadlil~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~~n~~G~ 222 (301)
.-++.++-+|=-..+++.+.+...|++=|+.-.. +. ...+ +.|... -.+|.+.|++|+.+.+++.
T Consensus 218 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~-G~-----Gn~p-~~~~~~-l~~a~~~Gi~VV~~Sr~~~ 282 (332)
T 2wlt_A 218 LPKVDIIYTHAGMTPDLFQASLNSHAKGVVIAGV-GN-----GNVS-AGFLKA-MQEASQMGVVIVRSSRVGS 282 (332)
T ss_dssp CCCEEEEECCTTCCTHHHHHHHHTTCSEEEEEEB-TT-----TBCC-HHHHHH-HHHHHHTTCEEEEEESSSS
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeE-CC-----CCCC-HHHHHH-HHHHHHCCCEEEEECCCCC
Confidence 4689999999999999999888889998887554 21 1112 333332 3357889999999999863
No 86
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=28.07 E-value=1.6e+02 Score=26.00 Aligned_cols=62 Identities=13% Similarity=0.106 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeeee
Q 022174 25 NLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE 96 (301)
Q Consensus 25 n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~~ 96 (301)
..+...++++.+++.|+|+|.|-=+- +-..+ ..| + . .+.+.+..|.+.+++.|+.++.-...
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q~fk-prts~----~~f-~---g-l~~egl~~L~~~~~~~Gl~~~te~~d 215 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGGAFK-PRTSP----YDF-Q---G-LGLEGLKILKRVSDEYGLGVISEIVT 215 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSC-CCSST----TSC-C---C-CTHHHHHHHHHHHHHHTCEEEEECCS
T ss_pred CHHHHHHHHHHHHHcCCCeEEccccc-CCCCh----Hhh-c---C-CCHHHHHHHHHHHHHcCCEEEEecCC
Confidence 46677888888888999998875432 10000 001 0 0 12367889999999999999876543
No 87
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=28.03 E-value=1.4e+02 Score=22.58 Aligned_cols=27 Identities=15% Similarity=0.101 Sum_probs=17.6
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEec
Q 022174 21 DVSTNLATAERLVRAAHGKGANIILIQ 47 (301)
Q Consensus 21 ~~~~n~~~~~~~i~~A~~~~~dlvvfP 47 (301)
.....+..+.++.++-+.+++.+|.++
T Consensus 63 ~C~~~~~~l~~l~~~~~~~~v~vv~is 89 (185)
T 2gs3_A 63 KTEVNYTQLVDLHARYAECGLRILAFP 89 (185)
T ss_dssp THHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred chHHHHHHHHHHHHHhhcCCeEEEEEE
Confidence 455566667776666666677777664
No 88
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=27.98 E-value=1.5e+02 Score=22.59 Aligned_cols=27 Identities=15% Similarity=0.182 Sum_probs=17.0
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEec
Q 022174 21 DVSTNLATAERLVRAAHGKGANIILIQ 47 (301)
Q Consensus 21 ~~~~n~~~~~~~i~~A~~~~~dlvvfP 47 (301)
.....+..+.++.++-..+++.+|.+.
T Consensus 62 ~C~~~~~~l~~l~~~~~~~~v~vv~vs 88 (190)
T 2vup_A 62 YTKGGYETATTLYNKYKSQGFTVLAFP 88 (190)
T ss_dssp THHHHHHHHHHHHHHHGGGTCEEEEEE
T ss_pred ccHHHHHHHHHHHHHHhcCCeEEEEEE
Confidence 445556666666666666677777663
No 89
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=27.89 E-value=1.3e+02 Score=24.61 Aligned_cols=68 Identities=15% Similarity=0.124 Sum_probs=34.6
Q ss_pred HHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeeee-cCCCeeeEEEEEEcC
Q 022174 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE-EANNAHYNSIAIIDA 111 (301)
Q Consensus 33 i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~~-~~~~~~yN~~~~i~~ 111 (301)
+..|...+++++++=|=. ....+.... ...+.|.+++++ +..|++-+-. ..-..+.+..+++ .
T Consensus 157 lAraL~~~p~lllLDEPt------s~LD~~~~~--------~l~~~l~~l~~~-g~tiiivtHd~~~~~~~~d~v~~l-~ 220 (256)
T 1vpl_A 157 IARALMVNPRLAILDEPT------SGLDVLNAR--------EVRKILKQASQE-GLTILVSSHNMLEVEFLCDRIALI-H 220 (256)
T ss_dssp HHHHHTTCCSEEEEESTT------TTCCHHHHH--------HHHHHHHHHHHT-TCEEEEEECCHHHHTTTCSEEEEE-E
T ss_pred HHHHHHcCCCEEEEeCCc------cccCHHHHH--------HHHHHHHHHHhC-CCEEEEEcCCHHHHHHHCCEEEEE-E
Confidence 334445677788887722 111221111 445667777654 5555544321 1112345566777 5
Q ss_pred CCCee
Q 022174 112 DGSDL 116 (301)
Q Consensus 112 ~G~i~ 116 (301)
+|+++
T Consensus 221 ~G~i~ 225 (256)
T 1vpl_A 221 NGTIV 225 (256)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 88875
No 90
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=27.85 E-value=1.6e+02 Score=25.35 Aligned_cols=65 Identities=15% Similarity=0.147 Sum_probs=46.9
Q ss_pred CceEEEEEeccCCcHHHHHHHHHCCCcEEEeecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEEecCccc
Q 022174 150 FAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGK 222 (301)
Q Consensus 150 ~~~ig~~IC~D~~~pe~~~~~~~~gadlil~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~~n~~G~ 222 (301)
.-++.++-+|=-..+++.+.+...|++=|+.-+. +. ...+ +.|... -.+|.+.|++|+.+.+++.
T Consensus 215 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~-G~-----Gn~p-~~~~~~-l~~a~~~gi~VV~~Sr~~~ 279 (330)
T 1wsa_A 215 LPRVDILYAHPDDTDVLVNAALQAGAKGIIHAGM-GN-----GNPF-PLTQNA-LEKAAKSGVVVARSSRVGS 279 (330)
T ss_dssp CCCEEEEECCSSCCSHHHHHHHHTTCSEEEEEEB-TT-----TBCC-HHHHHH-HHHHHHTTCEEEEEESSSS
T ss_pred CCceEEEEeCCCCCHHHHHHHHhCCCCEEEEeeE-CC-----CCCC-HHHHHH-HHHHHHCCCEEEEECCCCC
Confidence 3589999999999999999888889998887554 21 1112 333332 3357889999999999863
No 91
>1vyb_A ORF2 contains A reverse transcriptase domain; endonuclease, APE-1 type, retrotransposition, retrotransposon, transferase; 1.8A {Homo sapiens} SCOP: d.151.1.1 PDB: 2v0s_A 2v0r_A
Probab=27.55 E-value=69 Score=25.07 Aligned_cols=42 Identities=10% Similarity=0.173 Sum_probs=25.0
Q ss_pred CcceEEEEEecccCCCHHHHHHHHHHHHHHHHhCCCcEEEeccccc
Q 022174 6 RREVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFE 51 (301)
Q Consensus 6 ~~~~kia~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l 51 (301)
.++|||.....+-... ....+.+.+.|+ +.++|+|++-|.-.
T Consensus 5 ~~~lri~t~Nv~g~~~-~~~~~~~~~~i~---~~~~DIv~LQE~~~ 46 (238)
T 1vyb_A 5 NSHITILTLNINGLNS-AIKRHRLASWIK---SQDPSVCCIQETHL 46 (238)
T ss_dssp CCCEEEEEEECSCCCS-HHHHHHHHHHHH---HHCCSEEEEECCCC
T ss_pred CCcceEEEEecccCCc-hhhHHHHHHHHH---HcCCCEEEEecccC
Confidence 3467776666654322 222244555554 45899999999753
No 92
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=27.50 E-value=1.6e+02 Score=23.83 Aligned_cols=59 Identities=10% Similarity=0.085 Sum_probs=36.3
Q ss_pred HHHHHHHHHHhCCCcEEEecccccCc---ccCCccchHHHhhcCCCCCChhHHHHHHHHHHh-CcEEeeee
Q 022174 28 TAERLVRAAHGKGANIILIQELFEGY---YFCQAQREDFFQRAKPYKDHPTILKMQELAKEL-GVVMPVSF 94 (301)
Q Consensus 28 ~~~~~i~~A~~~~~dlvvfPE~~l~g---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~-~i~iv~G~ 94 (301)
.+.++++.|++.|.+.|++=+..... +.......+ .. ..+++.++++.+++ ++.|+.|.
T Consensus 17 ~~ee~v~~A~~~Gl~~iaiTDH~~~~~~~~~~~~~~~~---~~-----~~y~~~~~~~~~~~~~i~i~~G~ 79 (267)
T 2yxo_A 17 HPEAYLEEARAKGLKGVVFTDHSPMPPWYDPESRMRLE---AL-----PFYLLALERVRERAQDLYVGIGL 79 (267)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEECCCCTTSSGGGSCCGG---GH-----HHHHHHHHHHHHHCTTSEEEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEcCCCCCCcccCccccccHH---HH-----HHHHHHHHHHHHHhcCCcEEEEE
Confidence 44588999999999998887766443 110000000 00 13456667777766 89999886
No 93
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=27.46 E-value=39 Score=25.56 Aligned_cols=43 Identities=7% Similarity=0.038 Sum_probs=25.1
Q ss_pred HHHHHHHHHhCcEEeeeeeecCCCeeeEEEEEEcCCCCeecccccc
Q 022174 77 LKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKS 122 (301)
Q Consensus 77 ~~l~~~a~~~~i~iv~G~~~~~~~~~yN~~~~i~~~G~i~~~~~K~ 122 (301)
+.+.++++.+++.+... ..+-....+.++||++|+|+..|...
T Consensus 104 ~~~~~~~~~~g~~~~~~---~~~~~~~~~~~lID~~G~i~~~~~g~ 146 (170)
T 3me7_A 104 EDLFKLLDAIDFRFMTA---GNDFIHPNVVVVLSPELQIKDYIYGV 146 (170)
T ss_dssp HHHHHHHHHTTCCCEEE---TTEEECCCEEEEECTTSBEEEEEESS
T ss_pred HHHHHHHHHCCeEEecC---CCccccCceEEEECCCCeEEEEEeCC
Confidence 56677777766554331 00011223578999999988665433
No 94
>3mpr_A Putative endonuclease/exonuclease/phosphatase FAM protein; structural genomics, PSI-2, protein structure initiative; HET: MSE PEG; 1.90A {Bacteroides thetaiotaomicron}
Probab=27.13 E-value=1.2e+02 Score=25.02 Aligned_cols=42 Identities=14% Similarity=0.197 Sum_probs=24.4
Q ss_pred CcceEEEEEecccCC--------CHHHHHHHHHHHHHHHHhCCCcEEEecccc
Q 022174 6 RREVVVSALQFACTD--------DVSTNLATAERLVRAAHGKGANIILIQELF 50 (301)
Q Consensus 6 ~~~~kia~~Q~~~~~--------~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~ 50 (301)
..++||+...+.... ......+.+.+.| .+.++|+|+|-|..
T Consensus 4 ~~~lrV~t~Ni~~~~~~~~~~~~~w~~r~~~i~~~i---~~~~~DIv~LQEv~ 53 (298)
T 3mpr_A 4 PTSLTVASYNLRNANGSDSARGDGWGQRYPVIAQMV---QYHDFDIFGTQECF 53 (298)
T ss_dssp CEEEEEEEEECCCCCHHHHHHTCCHHHHHHHHHHHH---HHTTCSEEEEESBC
T ss_pred CCcEEEEEEEeccCCCCCcccccCHHHHHHHHHHHH---HHcCCCEEEEeCCC
Confidence 345666666654421 1233344444444 45689999999953
No 95
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=26.60 E-value=1.1e+02 Score=26.92 Aligned_cols=71 Identities=13% Similarity=0.225 Sum_probs=41.6
Q ss_pred HHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeeeecC-CCeeeEEEEEEc
Q 022174 32 LVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEA-NNAHYNSIAIID 110 (301)
Q Consensus 32 ~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~~~~-~~~~yN~~~~i~ 110 (301)
.|.+|...+++++++=|-. ..+.+... ...++.|+++.++.+++|++-+-.-+ -..+-+..+++
T Consensus 173 aIArAL~~~P~lLLlDEPT------s~LD~~~~--------~~i~~lL~~l~~~~g~Tii~vTHdl~~~~~~aDrv~vl- 237 (366)
T 3tui_C 173 AIARALASNPKVLLCDQAT------SALDPATT--------RSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVI- 237 (366)
T ss_dssp HHHHHTTTCCSEEEEESTT------TTSCHHHH--------HHHHHHHHHHHHHSCCEEEEEESCHHHHHHHCSEEEEE-
T ss_pred HHHHHHhcCCCEEEEECCC------ccCCHHHH--------HHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEE-
Confidence 3444555678888888822 11111111 14667888888887888776542111 11355677788
Q ss_pred CCCCeec
Q 022174 111 ADGSDLG 117 (301)
Q Consensus 111 ~~G~i~~ 117 (301)
.+|+++.
T Consensus 238 ~~G~iv~ 244 (366)
T 3tui_C 238 SNGELIE 244 (366)
T ss_dssp ETTEEEE
T ss_pred ECCEEEE
Confidence 5888764
No 96
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=26.33 E-value=1.7e+02 Score=25.05 Aligned_cols=65 Identities=18% Similarity=0.179 Sum_probs=46.7
Q ss_pred CceEEEEEeccCCcHHHHHHHHHCCCcEEEeecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEEecCccc
Q 022174 150 FAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGK 222 (301)
Q Consensus 150 ~~~ig~~IC~D~~~pe~~~~~~~~gadlil~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~~n~~G~ 222 (301)
.-++.++-+|=-..+++.+.+...|++=|+.-.. +. ...+ ..|.. .-.+|.+.|++|+.+.+++.
T Consensus 211 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVl~~~-G~-----Gn~p-~~~~~-~l~~a~~~gi~VV~~Sr~~~ 275 (326)
T 1nns_A 211 LPKVGIVYNYANASDLPAKALVDAGYDGIVSAGV-GN-----GNLY-KSVFD-TLATAAKTGTAVVRSSRVPT 275 (326)
T ss_dssp CCCEEEEECCTTCCSHHHHHHHHTTCSEEEEEEB-TT-----TBCC-HHHHH-HHHHHHHTTCEEEEEESSSS
T ss_pred CCceEEEEeCCCCCHHHHHHHHhCCCCEEEEeeE-CC-----CCCC-HHHHH-HHHHHHHCCCEEEEECCCCC
Confidence 3589999999999999999888889998887554 11 1112 33333 23367889999999999863
No 97
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=24.91 E-value=1.5e+02 Score=25.60 Aligned_cols=70 Identities=16% Similarity=0.131 Sum_probs=39.4
Q ss_pred HHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeeeecC-CCeeeEEEEEEcC
Q 022174 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEA-NNAHYNSIAIIDA 111 (301)
Q Consensus 33 i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~~~~-~~~~yN~~~~i~~ 111 (301)
+.+|...+++++++=|= ...+.....+ ...+.|+++.++.++++++-+-..+ -..+-+..+++ .
T Consensus 138 lAraL~~~P~lLLLDEP------~s~LD~~~~~--------~l~~~l~~l~~~~g~tii~vTHd~~~~~~~adri~vl-~ 202 (348)
T 3d31_A 138 LARALVTNPKILLLDEP------LSALDPRTQE--------NAREMLSVLHKKNKLTVLHITHDQTEARIMADRIAVV-M 202 (348)
T ss_dssp HHHHTTSCCSEEEEESS------STTSCHHHHH--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHCSEEEEE-S
T ss_pred HHHHHHcCCCEEEEECc------cccCCHHHHH--------HHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEE-E
Confidence 34444557778888772 1222222221 4567788888777777665542211 11345677788 5
Q ss_pred CCCeec
Q 022174 112 DGSDLG 117 (301)
Q Consensus 112 ~G~i~~ 117 (301)
+|+++.
T Consensus 203 ~G~i~~ 208 (348)
T 3d31_A 203 DGKLIQ 208 (348)
T ss_dssp SSCEEE
T ss_pred CCEEEE
Confidence 898864
No 98
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=24.73 E-value=1.4e+02 Score=25.15 Aligned_cols=30 Identities=17% Similarity=0.006 Sum_probs=26.3
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCcEEEeccc
Q 022174 20 DDVSTNLATAERLVRAAHGKGANIILIQEL 49 (301)
Q Consensus 20 ~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~ 49 (301)
.+.+++++.+.+.++.|++.+..+.+.||.
T Consensus 114 ~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d 143 (293)
T 3ewb_X 114 MSRAEVLASIKHHISYARQKFDVVQFSPED 143 (293)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSCEEEEEET
T ss_pred CCHHHHHHHHHHHHHHHHhCCCEEEEEecc
Confidence 468899999999999999999998887874
No 99
>2nyd_A UPF0135 protein SA1388; hypothetical protein SA1388, selenomethionine SAD, unknown F; 2.00A {Staphylococcus aureus subsp} PDB: 3lnl_A*
Probab=24.66 E-value=1.8e+02 Score=25.46 Aligned_cols=58 Identities=14% Similarity=0.139 Sum_probs=37.6
Q ss_pred EEEEeccCCcHHHHHHHHHCCCcEEE--eecccCCCCCCCCCCcHHHHHHHhhhhHhcCcceEEEe
Q 022174 154 GVAICWDQWFPEAARAMVLQGAEILF--YPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVAS 217 (301)
Q Consensus 154 g~~IC~D~~~pe~~~~~~~~gadlil--~p~~~~~~~~~~~~~~~~~~~~~~~~~A~e~~~~vv~~ 217 (301)
++++|-|. .++...++..+|||+|+ +|.-|. |...- ....| .-...++++|++.+..+
T Consensus 42 ~Vl~alD~-t~~Vv~eAi~~~adlIItHHPlif~--~~k~i--~~~~~-~r~i~~li~~~Ialya~ 101 (370)
T 2nyd_A 42 GVLTALDC-TLEVVNEAIEKGYNTIISHHPLIFK--GVTSL--KANGY-GLIIRKLIQHDINLIAM 101 (370)
T ss_dssp CEEEESSC-CHHHHHHHHHHTCCEEEESSCSSCS--CCSCC--CSSTH-HHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcC-CHHHHHHHHHCCCCEEEECCCcccC--Ccccc--CcCCH-HHHHHHHHHCCCeEEEe
Confidence 57789998 57788889999999999 455431 21111 11223 33445688999988543
No 100
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=24.45 E-value=1.2e+02 Score=24.46 Aligned_cols=68 Identities=10% Similarity=0.059 Sum_probs=35.8
Q ss_pred HHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEe-eeeeecCCCeeeEEEEEEcC
Q 022174 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMP-VSFFEEANNAHYNSIAIIDA 111 (301)
Q Consensus 33 i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv-~G~~~~~~~~~yN~~~~i~~ 111 (301)
+.+|...+++++++=|=. ....+...+ ...+.|++++++ +..|+ +.+-...-..+.+..+++ .
T Consensus 150 lAraL~~~p~lllLDEPt------s~LD~~~~~--------~l~~~l~~~~~~-g~tvi~vtHd~~~~~~~~d~v~~l-~ 213 (240)
T 1ji0_A 150 IGRALMSRPKLLMMDEPS------LGLAPILVS--------EVFEVIQKINQE-GTTILLVEQNALGALKVAHYGYVL-E 213 (240)
T ss_dssp HHHHHTTCCSEEEEECTT------TTCCHHHHH--------HHHHHHHHHHHT-TCCEEEEESCHHHHHHHCSEEEEE-E
T ss_pred HHHHHHcCCCEEEEcCCc------ccCCHHHHH--------HHHHHHHHHHHC-CCEEEEEecCHHHHHHhCCEEEEE-E
Confidence 445556788888888822 222222221 455667777653 44444 443211111345667777 4
Q ss_pred CCCee
Q 022174 112 DGSDL 116 (301)
Q Consensus 112 ~G~i~ 116 (301)
+|+++
T Consensus 214 ~G~i~ 218 (240)
T 1ji0_A 214 TGQIV 218 (240)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 88875
No 101
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=24.11 E-value=1.1e+02 Score=25.32 Aligned_cols=63 Identities=11% Similarity=0.088 Sum_probs=35.3
Q ss_pred CCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeee-eecCCCeeeEEEEEEcCCCCeec
Q 022174 40 GANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSF-FEEANNAHYNSIAIIDADGSDLG 117 (301)
Q Consensus 40 ~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~-~~~~~~~~yN~~~~i~~~G~i~~ 117 (301)
+++++++=|=. ..+.+... ....+.|++++++.++.|++-+ -...-..+-+..+++ .+|+++.
T Consensus 165 ~p~lLllDEPt------s~LD~~~~--------~~i~~~l~~l~~~~~~tvi~vtHdl~~~~~~~d~v~vl-~~G~i~~ 228 (266)
T 4g1u_C 165 TPRWLFLDEPT------SALDLYHQ--------QHTLRLLRQLTRQEPLAVCCVLHDLNLAALYADRIMLL-AQGKLVA 228 (266)
T ss_dssp CCEEEEECCCC------SSCCHHHH--------HHHHHHHHHHHHHSSEEEEEECSCHHHHHHHCSEEEEE-ETTEEEE
T ss_pred CCCEEEEeCcc------ccCCHHHH--------HHHHHHHHHHHHcCCCEEEEEEcCHHHHHHhCCEEEEE-ECCEEEE
Confidence 78888888822 11111111 1456778888877775655443 111111345677788 5888864
No 102
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=23.97 E-value=2.3e+02 Score=21.33 Aligned_cols=18 Identities=0% Similarity=-0.182 Sum_probs=13.4
Q ss_pred hhHHHHHHHHHHhCcEEe
Q 022174 74 PTILKMQELAKELGVVMP 91 (301)
Q Consensus 74 ~~~~~l~~~a~~~~i~iv 91 (301)
.+-+.++++|+++++.++
T Consensus 140 ~~n~~~~~~a~~~~v~~i 157 (200)
T 4h08_A 140 VRNQIALKHINRASIEVN 157 (200)
T ss_dssp HHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHhhhcceEEE
Confidence 345678888999887765
No 103
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=23.96 E-value=2.6e+02 Score=21.97 Aligned_cols=19 Identities=16% Similarity=-0.025 Sum_probs=16.3
Q ss_pred ChhHHHHHHHHHHhCcEEe
Q 022174 73 HPTILKMQELAKELGVVMP 91 (301)
Q Consensus 73 ~~~~~~l~~~a~~~~i~iv 91 (301)
..+.+.++++|+++++.++
T Consensus 149 ~~y~~~~~~vA~~~~v~~i 167 (233)
T 1k7c_A 149 TRFVEYAELAAEVAGVEYV 167 (233)
T ss_dssp CHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHhCCeEE
Confidence 3678899999999998876
No 104
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=23.41 E-value=1.6e+02 Score=26.32 Aligned_cols=21 Identities=5% Similarity=0.199 Sum_probs=18.3
Q ss_pred ChhHHHHHHHHHHhCcEEeee
Q 022174 73 HPTILKMQELAKELGVVMPVS 93 (301)
Q Consensus 73 ~~~~~~l~~~a~~~~i~iv~G 93 (301)
..+++.|.++|+++++.+++=
T Consensus 243 ~~~l~~l~~l~~~~gillI~D 263 (472)
T 3hmu_A 243 DSYWPEIQRICDKYDILLIAD 263 (472)
T ss_dssp TTHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEE
Confidence 378999999999999988865
No 105
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=23.32 E-value=1.5e+02 Score=25.85 Aligned_cols=70 Identities=11% Similarity=0.146 Sum_probs=39.5
Q ss_pred HHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeeeecC-CCeeeEEEEEEcC
Q 022174 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEA-NNAHYNSIAIIDA 111 (301)
Q Consensus 33 i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~~~~-~~~~yN~~~~i~~ 111 (301)
+.+|...+++++++=|= ...+.....+ ...+.|+++.++.++++++-+-..+ -..+-+..+++ .
T Consensus 156 lArAL~~~P~lLLLDEP------~s~LD~~~r~--------~l~~~l~~l~~~~g~tvi~vTHd~~~a~~~adri~vl-~ 220 (355)
T 1z47_A 156 LARALAPRPQVLLFDEP------FAAIDTQIRR--------ELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVL-H 220 (355)
T ss_dssp HHHHHTTCCSEEEEEST------TCCSSHHHHH--------HHHHHHHHHHHHHTCEEEEECSCHHHHHHHCSEEEEE-E
T ss_pred HHHHHHcCCCEEEEeCC------cccCCHHHHH--------HHHHHHHHHHHhcCCEEEEECCCHHHHHHhCCEEEEE-E
Confidence 44455567788888882 1222222221 4567788888777777765542111 11345667777 5
Q ss_pred CCCeec
Q 022174 112 DGSDLG 117 (301)
Q Consensus 112 ~G~i~~ 117 (301)
+|+++.
T Consensus 221 ~G~i~~ 226 (355)
T 1z47_A 221 EGNVEQ 226 (355)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 888763
No 106
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=22.87 E-value=1.7e+02 Score=21.96 Aligned_cols=27 Identities=15% Similarity=0.101 Sum_probs=16.7
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEec
Q 022174 21 DVSTNLATAERLVRAAHGKGANIILIQ 47 (301)
Q Consensus 21 ~~~~n~~~~~~~i~~A~~~~~dlvvfP 47 (301)
.....+..+.++.++-.++++.+|.+.
T Consensus 61 ~C~~~~~~l~~l~~~~~~~~v~vv~vs 87 (183)
T 2obi_A 61 KTEVNYTQLVDLHARYAECGLRILAFP 87 (183)
T ss_dssp THHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred CcHHHHHHHHHHHHHHhcCCeEEEEEE
Confidence 455556666666666655667776653
No 107
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=22.84 E-value=2.4e+02 Score=21.08 Aligned_cols=77 Identities=8% Similarity=-0.016 Sum_probs=44.2
Q ss_pred eEEEEEeccc---C-----CCHHHHHHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHH
Q 022174 9 VVVSALQFAC---T-----DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQ 80 (301)
Q Consensus 9 ~kia~~Q~~~---~-----~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (301)
-.+.++++.. . .+.++..+.+.++++.+++.++.+++.--........... ....+.. ..+-+.++
T Consensus 75 pd~vvi~~G~ND~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~vil~~~~p~~~~~~~~~-~~~~~~~-----~~~n~~l~ 148 (204)
T 3p94_A 75 PKAVVILAGINDIAHNNGVIALENVFGNLVSMAELAKANHIKVIFCSVLPAYDFPWRPG-MQPADKV-----IQLNKWIK 148 (204)
T ss_dssp EEEEEEECCHHHHTTTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCSCBTTBTT-CCCHHHH-----HHHHHHHH
T ss_pred CCEEEEEeecCccccccCCCCHHHHHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCcc-ccHHHHH-----HHHHHHHH
Confidence 4677777765 1 2567777778888888877899888773221111100000 0000001 14567788
Q ss_pred HHHHHhCcEEe
Q 022174 81 ELAKELGVVMP 91 (301)
Q Consensus 81 ~~a~~~~i~iv 91 (301)
++|+++++.++
T Consensus 149 ~~a~~~~v~~i 159 (204)
T 3p94_A 149 EYADKNGLTYV 159 (204)
T ss_dssp HHHHHTTCEEE
T ss_pred HHHHHcCCcEE
Confidence 88998887765
No 108
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=22.72 E-value=1.3e+02 Score=24.65 Aligned_cols=68 Identities=19% Similarity=0.193 Sum_probs=35.2
Q ss_pred HHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeee-eeecCCCeeeEEEEEEcC
Q 022174 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS-FFEEANNAHYNSIAIIDA 111 (301)
Q Consensus 33 i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G-~~~~~~~~~yN~~~~i~~ 111 (301)
+..|...+++++++=|=. ....+...+ ...+.|++++++ +..|++- .-...-..+-+..+++ .
T Consensus 164 lAraL~~~p~lllLDEPt------s~LD~~~~~--------~~~~~l~~l~~~-g~tvi~vtHd~~~~~~~~d~v~~l-~ 227 (262)
T 1b0u_A 164 IARALAMEPDVLLFDEPT------SALDPELVG--------EVLRIMQQLAEE-GKTMVVVTHEMGFARHVSSHVIFL-H 227 (262)
T ss_dssp HHHHHHTCCSEEEEESTT------TTSCHHHHH--------HHHHHHHHHHHT-TCCEEEECSCHHHHHHHCSEEEEE-E
T ss_pred HHHHHhcCCCEEEEeCCC------ccCCHHHHH--------HHHHHHHHHHhC-CCEEEEEeCCHHHHHHhCCEEEEE-E
Confidence 344555677888888822 111221111 455677777665 5555443 3111111344566777 4
Q ss_pred CCCee
Q 022174 112 DGSDL 116 (301)
Q Consensus 112 ~G~i~ 116 (301)
+|+++
T Consensus 228 ~G~i~ 232 (262)
T 1b0u_A 228 QGKIE 232 (262)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 88875
No 109
>1wdu_A TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA binding protein; 2.40A {Bombyx mori} SCOP: d.151.1.1
Probab=22.53 E-value=77 Score=25.27 Aligned_cols=37 Identities=24% Similarity=0.137 Sum_probs=21.4
Q ss_pred EEEEecccCCCHHHHHHHHHHHHHHHHhCCCcEEEeccccc
Q 022174 11 VSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFE 51 (301)
Q Consensus 11 ia~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~dlvvfPE~~l 51 (301)
+-+++.|+.+. ....+.+.+.+ ++.++|+|++-|.-.
T Consensus 20 lri~s~Nv~~~-~~~~~~l~~~i---~~~~~DIv~lQE~~~ 56 (245)
T 1wdu_A 20 YRVLQANLQRK-KLATAELAIEA---ATRKAAIALIQEPYV 56 (245)
T ss_dssp EEEEEEECTTC-HHHHHHHHHHH---HHHTCSEEEEESCCC
T ss_pred eeeeeeecccc-HHHHHHHHHHH---hhcCCCEEEEEcccc
Confidence 44555665332 12233444444 456899999999654
No 110
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=22.20 E-value=1.5e+02 Score=25.96 Aligned_cols=54 Identities=9% Similarity=-0.010 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeee
Q 022174 26 LATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (301)
Q Consensus 26 ~~~~~~~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G 93 (301)
++.+++.+++...+-+=+++-|=...+|... +...+++.|.++|+++++.+++=
T Consensus 187 ~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~--------------~~~~~l~~l~~l~~~~~~~li~D 240 (429)
T 3k28_A 187 LESVKYAFEQFGDDIACVIVEPVAGNMGVVP--------------PQPGFLEGLREVTEQNGALLIFD 240 (429)
T ss_dssp HHHHHHHHHHHGGGEEEEEECSSBCTTSCBC--------------CCTTHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEEcCCCCCCCccc--------------CCHHHHHHHHHHHHHcCCEEEEe
Confidence 4555555554322223355555444444321 12367899999999999988764
No 111
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=22.08 E-value=1.5e+02 Score=25.61 Aligned_cols=70 Identities=19% Similarity=0.244 Sum_probs=39.7
Q ss_pred HHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeeeecC-CCeeeEEEEEEcC
Q 022174 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEA-NNAHYNSIAIIDA 111 (301)
Q Consensus 33 i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~~~~-~~~~yN~~~~i~~ 111 (301)
+.+|...+++++++=|=. ..+..... ....+.|+++.++.++.+++-+-..+ -..+-+..+++ .
T Consensus 151 lAraL~~~P~lLLLDEP~------s~LD~~~r--------~~l~~~l~~l~~~~g~tvi~vTHd~~~~~~~adri~vl-~ 215 (353)
T 1oxx_K 151 LARALVKDPSLLLLDEPF------SNLDARMR--------DSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVL-V 215 (353)
T ss_dssp HHHHHTTCCSEEEEESTT------TTSCGGGH--------HHHHHHHHHHHHHHCCEEEEEESCHHHHHHHCSEEEEE-E
T ss_pred HHHHHHhCCCEEEEECCc------ccCCHHHH--------HHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEE-E
Confidence 444555678888888822 11111111 14567788888777777665442111 11345667777 5
Q ss_pred CCCeec
Q 022174 112 DGSDLG 117 (301)
Q Consensus 112 ~G~i~~ 117 (301)
+|+++.
T Consensus 216 ~G~i~~ 221 (353)
T 1oxx_K 216 KGKLVQ 221 (353)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 888763
No 112
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=21.95 E-value=1.6e+02 Score=24.79 Aligned_cols=46 Identities=22% Similarity=0.230 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhCCCc-EEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeee
Q 022174 27 ATAERLVRAAHGKGAN-IILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (301)
Q Consensus 27 ~~~~~~i~~A~~~~~d-lvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G 93 (301)
+...+.+++|.+.|+. +|++++ |+. ....+.+.+.|+++++.++.+
T Consensus 81 ~~~~~~v~ea~~~Gi~~vVi~t~----G~~-----------------~~~~~~l~~~A~~~gi~viGP 127 (294)
T 2yv1_A 81 PFAKDAVFEAIDAGIELIVVITE----HIP-----------------VHDTMEFVNYAEDVGVKIIGP 127 (294)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCS----CCC-----------------HHHHHHHHHHHHHHTCEEECS
T ss_pred HHHHHHHHHHHHCCCCEEEEECC----CCC-----------------HHHHHHHHHHHHHcCCEEEcC
Confidence 3556777888888888 565665 331 022478899999999976643
No 113
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=21.93 E-value=1.9e+02 Score=23.44 Aligned_cols=26 Identities=12% Similarity=0.134 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEec
Q 022174 22 VSTNLATAERLVRAAHGKGANIILIQ 47 (301)
Q Consensus 22 ~~~n~~~~~~~i~~A~~~~~dlvvfP 47 (301)
.+..++.+.+.++.|++-|+..|++.
T Consensus 84 r~~~~~~~~~~i~~A~~lG~~~v~~~ 109 (287)
T 2x7v_A 84 WQKSVELLKKEVEICRKLGIRYLNIH 109 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 35678888999999999999988763
No 114
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=21.90 E-value=1.4e+02 Score=24.66 Aligned_cols=68 Identities=21% Similarity=0.254 Sum_probs=35.8
Q ss_pred HHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeeeecC-CCeeeEEEEEEcC
Q 022174 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEA-NNAHYNSIAIIDA 111 (301)
Q Consensus 33 i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~~~~-~~~~yN~~~~i~~ 111 (301)
+..|...+++++++=|=. ..+.+...+ ...+.|++++++ +..|++-+-..+ -..+.+..+++ .
T Consensus 170 lAraL~~~p~lllLDEPt------s~LD~~~~~--------~~~~~l~~l~~~-g~tvi~vtHd~~~~~~~~d~v~~l-~ 233 (263)
T 2olj_A 170 IARALAMEPKIMLFDEPT------SALDPEMVG--------EVLSVMKQLANE-GMTMVVVTHEMGFAREVGDRVLFM-D 233 (263)
T ss_dssp HHHHHTTCCSEEEEESTT------TTSCHHHHH--------HHHHHHHHHHHT-TCEEEEECSCHHHHHHHCSEEEEE-E
T ss_pred HHHHHHCCCCEEEEeCCc------ccCCHHHHH--------HHHHHHHHHHhC-CCEEEEEcCCHHHHHHhCCEEEEE-E
Confidence 344445677788877722 111121111 456677777666 666665432111 11345667777 4
Q ss_pred CCCee
Q 022174 112 DGSDL 116 (301)
Q Consensus 112 ~G~i~ 116 (301)
+|+++
T Consensus 234 ~G~i~ 238 (263)
T 2olj_A 234 GGYII 238 (263)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 88875
No 115
>3tvk_A DGC, diguanylate cyclase YDEH; putative zinc sensor, C-DI-GMP, transfe; HET: C2E; 1.80A {Escherichia coli}
Probab=21.63 E-value=2.1e+02 Score=21.83 Aligned_cols=39 Identities=13% Similarity=0.168 Sum_probs=29.1
Q ss_pred ceEEEEEecccCCCHHHHHHHHHHHHHHHHhCCCcEEEe
Q 022174 8 EVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILI 46 (301)
Q Consensus 8 ~~kia~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~dlvvf 46 (301)
++.+|++......+.+..+++....+.+||+.|-+-++|
T Consensus 123 t~SiGia~~~~~~~~~~ll~~Ad~Aly~AK~~Grn~~~~ 161 (179)
T 3tvk_A 123 TVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMF 161 (179)
T ss_dssp CEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred EEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 456777766555678888999999999999987664443
No 116
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=21.58 E-value=1.8e+02 Score=21.93 Aligned_cols=20 Identities=5% Similarity=0.189 Sum_probs=15.8
Q ss_pred hh--HHHHHHHHHHhCcEEeee
Q 022174 74 PT--ILKMQELAKELGVVMPVS 93 (301)
Q Consensus 74 ~~--~~~l~~~a~~~~i~iv~G 93 (301)
+. ++.+.+.++++++.+.++
T Consensus 160 e~~~l~~~~~~~~~~g~~~~i~ 181 (182)
T 3can_A 160 SEEVQQQCIQILTDYGLKATIG 181 (182)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHHHcCCceEeC
Confidence 45 788999999998877653
No 117
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=21.45 E-value=2.5e+02 Score=25.04 Aligned_cols=55 Identities=18% Similarity=0.177 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHhC--CCcEEEe-cccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeee
Q 022174 25 NLATAERLVRAAHGK--GANIILI-QELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (301)
Q Consensus 25 n~~~~~~~i~~A~~~--~~dlvvf-PE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G 93 (301)
.++.+++.++..... +..+|++ |=...+|... +...+++.|.++|+++++.+++=
T Consensus 241 d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~--------------~~~~~l~~l~~l~~~~g~lli~D 298 (472)
T 1ohv_A 241 CLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNH--------------ASDDFFRKLRDISRKHGCAFLVD 298 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBC--------------CCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCC--------------CCHHHHHHHHHHHHHhCCEEEEe
Confidence 356666666543221 3445544 5334455321 11368899999999999998865
No 118
>3icl_A EAL/ggdef domain protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics, consortium, NESG; HET: MSE; 2.00A {Methylococcus capsulatus}
Probab=21.41 E-value=1.8e+02 Score=21.28 Aligned_cols=41 Identities=15% Similarity=0.178 Sum_probs=31.3
Q ss_pred ceEEEEEeccc-CCCHHHHHHHHHHHHHHHHhCCCcE-EEecc
Q 022174 8 EVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANI-ILIQE 48 (301)
Q Consensus 8 ~~kia~~Q~~~-~~~~~~n~~~~~~~i~~A~~~~~dl-vvfPE 48 (301)
++.++++.... ..+.++.+++....+.+|++.|-+- .+|.+
T Consensus 120 ~~siGia~~~~~~~~~~~ll~~A~~Al~~ak~~g~~~~~~~~~ 162 (171)
T 3icl_A 120 SVSIGIAVSPADGETMEQLLRNADTAMYHAKSRGKNNYQFFSP 162 (171)
T ss_dssp CEEEEEEETTTTCSSHHHHHHHHHHHHHHHHHHCSSEEEECCC
T ss_pred EEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHhCCCcEEEEcC
Confidence 47788887765 5688999999999999998876554 44444
No 119
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii}
Probab=21.10 E-value=3.1e+02 Score=22.43 Aligned_cols=103 Identities=12% Similarity=0.040 Sum_probs=47.1
Q ss_pred HHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHh-CcEEeeeeeecCCCeeeE-EEEEE
Q 022174 32 LVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKEL-GVVMPVSFFEEANNAHYN-SIAII 109 (301)
Q Consensus 32 ~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~-~i~iv~G~~~~~~~~~yN-~~~~i 109 (301)
.+..|...+++++++=|=. ..... ...+.+.++-++. ++.|++.+-...-..+.+ ..+++
T Consensus 138 ~lAraL~~~p~lllLDEPt------s~LD~------------~~~~~l~~~L~~~~~tviivtHd~~~~~~~~d~~i~~l 199 (263)
T 2pjz_A 138 RTSLALASQPEIVGLDEPF------ENVDA------------ARRHVISRYIKEYGKEGILVTHELDMLNLYKEYKAYFL 199 (263)
T ss_dssp HHHHHHHTCCSEEEEECTT------TTCCH------------HHHHHHHHHHHHSCSEEEEEESCGGGGGGCTTSEEEEE
T ss_pred HHHHHHHhCCCEEEEECCc------cccCH------------HHHHHHHHHHHHhcCcEEEEEcCHHHHHHhcCceEEEE
Confidence 4555666788888888822 11111 2233333333333 233444432111123556 67777
Q ss_pred cCCCCeecccccccCCCCCCCCcceeecCCCCCceeEEeCCceEEEEEe
Q 022174 110 DADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAIC 158 (301)
Q Consensus 110 ~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~~~~~~~~~~~~ig~~IC 158 (301)
.+|+++..-....+.. +............++...+.++...-+
T Consensus 200 -~~G~i~~~g~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (263)
T 2pjz_A 200 -VGNRLQGPISVSELLE-----SSIVEGERNDALLVLDIMDKKVSIVKG 242 (263)
T ss_dssp -ETTEEEEEEEHHHHHT-----EEEEESCCTTCSEEEEETTEEEEEEES
T ss_pred -ECCEEEEecCHHHHHh-----hhcccccCCCceEEEEeCCcceeeecc
Confidence 5888753221111100 111111111224567777777776666
No 120
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=20.90 E-value=1.3e+02 Score=26.21 Aligned_cols=21 Identities=10% Similarity=0.142 Sum_probs=18.0
Q ss_pred ChhHHHHHHHHHHhCcEEeee
Q 022174 73 HPTILKMQELAKELGVVMPVS 93 (301)
Q Consensus 73 ~~~~~~l~~~a~~~~i~iv~G 93 (301)
.++++.|.++|+++++.++.=
T Consensus 219 ~~~l~~l~~l~~~~~~~li~D 239 (427)
T 3fq8_A 219 AGFLEGLREITLEHDALLVFD 239 (427)
T ss_dssp TTHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEe
Confidence 367899999999999988864
No 121
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=20.35 E-value=1.3e+02 Score=21.15 Aligned_cols=42 Identities=12% Similarity=0.145 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhCcE-EeeeeeecCCCeeeEEEEEEcCCCCeecccc
Q 022174 76 ILKMQELAKELGVV-MPVSFFEEANNAHYNSIAIIDADGSDLGLYR 120 (301)
Q Consensus 76 ~~~l~~~a~~~~i~-iv~G~~~~~~~~~yN~~~~i~~~G~i~~~~~ 120 (301)
++.+.+.+++.|+. ++.+-.....+ .+ +++.||+|..+..+.
T Consensus 77 vd~~~~~l~~~G~~~~~~~p~~~~~G-~~--~~~~DPdGn~iel~~ 119 (128)
T 3g12_A 77 LEKTVQELVKIPGAMCILDPTDMPDG-KK--AIVLDPDGHSIELCE 119 (128)
T ss_dssp HHHHHHHHTTSTTCEEEEEEEECC-C-EE--EEEECTTCCEEEEEC
T ss_pred HHHHHHHHHHCCCceeccCceeCCCc-cE--EEEECCCCCEEEEEE
Confidence 56666667777888 55443222223 33 789999998875433
No 122
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=20.34 E-value=1.9e+02 Score=25.27 Aligned_cols=70 Identities=14% Similarity=0.158 Sum_probs=39.2
Q ss_pred HHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeeeecC-CCeeeEEEEEEcC
Q 022174 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEA-NNAHYNSIAIIDA 111 (301)
Q Consensus 33 i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~~~~-~~~~yN~~~~i~~ 111 (301)
+.+|...+++++++=|= ...+...... ...+.|+++.++.++++++-+-..+ -..+-+..+++ .
T Consensus 150 lArAL~~~P~lLLLDEP------~s~LD~~~r~--------~l~~~l~~l~~~~g~tvi~vTHd~~~a~~~adri~vl-~ 214 (372)
T 1g29_1 150 LGRAIVRKPQVFLMDEP------LSNLDAKLRV--------RMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVM-N 214 (372)
T ss_dssp HHHHHHTCCSEEEEECT------TTTSCHHHHH--------HHHHHHHHHHHHHTCEEEEEESCHHHHHHHCSEEEEE-E
T ss_pred HHHHHhcCCCEEEECCC------CccCCHHHHH--------HHHHHHHHHHHhcCCEEEEECCCHHHHHHhCCEEEEE-e
Confidence 44445567788888882 2222222221 4567788887777777665542111 11345667777 5
Q ss_pred CCCeec
Q 022174 112 DGSDLG 117 (301)
Q Consensus 112 ~G~i~~ 117 (301)
+|+++.
T Consensus 215 ~G~i~~ 220 (372)
T 1g29_1 215 RGVLQQ 220 (372)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 888763
No 123
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=20.29 E-value=1.9e+02 Score=25.17 Aligned_cols=71 Identities=17% Similarity=0.195 Sum_probs=41.1
Q ss_pred HHHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeeeecCC-CeeeEEEEEEc
Q 022174 32 LVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEAN-NAHYNSIAIID 110 (301)
Q Consensus 32 ~i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~~~~~-~~~yN~~~~i~ 110 (301)
.+.+|...+++++++=|= ...+.....+ ...+.|+++.++.++++++-+-..+. -.+-+..+++
T Consensus 143 alArAL~~~P~lLLLDEP------~s~LD~~~r~--------~l~~~l~~l~~~~g~tvi~vTHd~~~~~~~adri~vl- 207 (359)
T 2yyz_A 143 ALARALVKQPKVLLFDEP------LSNLDANLRM--------IMRAEIKHLQQELGITSVYVTHDQAEAMTMASRIAVF- 207 (359)
T ss_dssp HHHHHHTTCCSEEEEEST------TTTSCHHHHH--------HHHHHHHHHHHHHCCEEEEEESCHHHHHHHCSEEEEE-
T ss_pred HHHHHHHcCCCEEEEECC------cccCCHHHHH--------HHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEE-
Confidence 355556678888888882 2222222222 45677888877777776655421111 1345667777
Q ss_pred CCCCeec
Q 022174 111 ADGSDLG 117 (301)
Q Consensus 111 ~~G~i~~ 117 (301)
.+|+++.
T Consensus 208 ~~G~i~~ 214 (359)
T 2yyz_A 208 NQGKLVQ 214 (359)
T ss_dssp ETTEEEE
T ss_pred ECCEEEE
Confidence 5888763
No 124
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=20.14 E-value=1.1e+02 Score=24.60 Aligned_cols=32 Identities=28% Similarity=0.478 Sum_probs=22.5
Q ss_pred HHHHHHhCcEEeeeeeecCCCeeeEEEEEEcCCCCeec
Q 022174 80 QELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLG 117 (301)
Q Consensus 80 ~~~a~~~~i~iv~G~~~~~~~~~yN~~~~i~~~G~i~~ 117 (301)
.++++.|+++. ...+..+-+.++||++|.|..
T Consensus 130 ~~va~~yGv~~------~~~g~~~R~tFiIDp~g~Ir~ 161 (219)
T 3tue_A 130 KNIARSYGVLE------ESQGVAYRGLFIIDPHGMLRQ 161 (219)
T ss_dssp SHHHHHTTCEE------TTTTEECEEEEEECTTSBEEE
T ss_pred cHHHHHcCCcc------cCCCeeEEEEEEECCCCeEEE
Confidence 56778887752 233456678899999998753
No 125
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=20.04 E-value=1.7e+02 Score=25.47 Aligned_cols=70 Identities=23% Similarity=0.252 Sum_probs=39.1
Q ss_pred HHHHHhCCCcEEEecccccCcccCCccchHHHhhcCCCCCChhHHHHHHHHHHhCcEEeeeeeecC-CCeeeEEEEEEcC
Q 022174 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEA-NNAHYNSIAIIDA 111 (301)
Q Consensus 33 i~~A~~~~~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G~~~~~-~~~~yN~~~~i~~ 111 (301)
+.+|...+++++++=|= ...+...... ...+.|+++.++.++.+++-+-..+ --.+-+..+++ .
T Consensus 144 lArAL~~~P~lLLLDEP------~s~LD~~~r~--------~l~~~l~~l~~~~g~tvi~vTHd~~~a~~~adri~vl-~ 208 (362)
T 2it1_A 144 IARALVKEPEVLLLDEP------LSNLDALLRL--------EVRAELKRLQKELGITTVYVTHDQAEALAMADRIAVI-R 208 (362)
T ss_dssp HHHHHTTCCSEEEEESG------GGGSCHHHHH--------HHHHHHHHHHHHHTCEEEEEESCHHHHHHHCSEEEEE-E
T ss_pred HHHHHHcCCCEEEEECc------cccCCHHHHH--------HHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEE-E
Confidence 44445567778888772 1112222211 4567788887777777665542211 11345667777 5
Q ss_pred CCCeec
Q 022174 112 DGSDLG 117 (301)
Q Consensus 112 ~G~i~~ 117 (301)
+|+++.
T Consensus 209 ~G~i~~ 214 (362)
T 2it1_A 209 EGEILQ 214 (362)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 888763
Done!