Your job contains 1 sequence.
>022175
MVRAFKMKGQKRKKKRDEKYDREEEEEEKEEVEEEELNDSGKRAKLEKTSQNDNKKGEED
GQEEKDVVVHEMEGIPIAPSDQNTKRPGVIFVLEKASLEVAKVGKSYQILNSDDHSNFLR
RNNKNPADYRPDIVHQALLSILDSRLTKAGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRF
AGIMLQLLQKLSITAVGKREKLLRVIKNPVTQYLPVNSRKIGFSYSSEKLVKMRNYVASI
SDDDNLVFVVCSEVISAYIYGDLFFHIYILSDINLYFSCLSFHVRLVQWHMGKSIVIIQM
I
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022175
(301 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2080645 - symbol:AT3G57000 species:3702 "Arabi... 690 5.6e-68 1
ASPGD|ASPL0000035794 - symbol:AN2759 species:162425 "Emer... 424 8.7e-40 1
POMBASE|SPAC18G6.07c - symbol:mra1 "rRNA (pseudouridine) ... 421 1.8e-39 1
WB|WBGene00012652 - symbol:Y39A1A.14 species:6239 "Caenor... 418 3.7e-39 1
UNIPROTKB|Q9XX15 - symbol:Y39A1A.14 "Ribosomal RNA small ... 418 3.7e-39 1
SGD|S000004176 - symbol:EMG1 "Methyltransferase for rRNA"... 412 1.6e-38 1
RGD|1307665 - symbol:Emg1 "EMG1 nucleolar protein homolog... 409 3.4e-38 1
MGI|MGI:1315195 - symbol:Emg1 "EMG1 nucleolar protein hom... 408 4.3e-38 1
UNIPROTKB|E2RKH8 - symbol:EMG1 "Uncharacterized protein" ... 401 2.4e-37 1
UNIPROTKB|I3LPQ4 - symbol:EMG1 "Uncharacterized protein" ... 401 2.4e-37 1
UNIPROTKB|Q92979 - symbol:EMG1 "Ribosomal RNA small subun... 400 3.0e-37 1
CGD|CAL0001059 - symbol:NEP1 species:5476 "Candida albica... 399 3.9e-37 1
UNIPROTKB|Q59W59 - symbol:NEP1 "Putative uncharacterized ... 399 3.9e-37 1
UNIPROTKB|F1N532 - symbol:EMG1 "Uncharacterized protein" ... 398 4.9e-37 1
UNIPROTKB|F1N832 - symbol:EMG1 "Uncharacterized protein" ... 383 1.9e-35 1
DICTYBASE|DDB_G0272732 - symbol:emg1 "putative ribosome b... 377 8.3e-35 1
FB|FBgn0029714 - symbol:CG3527 species:7227 "Drosophila m... 376 1.1e-34 1
ZFIN|ZDB-GENE-060421-2909 - symbol:zgc:136360 "zgc:136360... 358 8.5e-33 1
UNIPROTKB|Q96UP2 - symbol:NEP1 "Ribosomal RNA small subun... 347 1.3e-31 1
GENEDB_PFALCIPARUM|PF08_0041 - symbol:PF08_0041 "ribosome... 297 2.5e-26 1
UNIPROTKB|Q8IB49 - symbol:PF08_0041 "Ribosome biogenesis ... 297 2.5e-26 1
UNIPROTKB|Q57977 - symbol:nep1 "Ribosomal RNA small subun... 160 1.1e-11 1
>TAIR|locus:2080645 [details] [associations]
symbol:AT3G57000 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0006626 "protein targeting to
mitochondrion" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0034968 "histone lysine methylation" evidence=RCA]
InterPro:IPR005304 Pfam:PF03587 EMBL:CP002686 GO:GO:0008168
EMBL:AL138655 KO:K14568 PANTHER:PTHR12636 EMBL:BT004815
EMBL:AK227852 IPI:IPI00538779 PIR:T47760 RefSeq:NP_191259.1
UniGene:At.43946 ProteinModelPortal:Q9M1J8 SMR:Q9M1J8 STRING:Q9M1J8
PRIDE:Q9M1J8 EnsemblPlants:AT3G57000.1 GeneID:824867
KEGG:ath:AT3G57000 TAIR:At3g57000 InParanoid:Q9M1J8 OMA:CISRICE
PhylomeDB:Q9M1J8 ProtClustDB:CLSN2684529 Genevestigator:Q9M1J8
Uniprot:Q9M1J8
Length = 298
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 137/215 (63%), Positives = 171/215 (79%)
Query: 39 DSGKRAKLEKTSQNDNXXXXXXXXXXXXXXXHEMEG-IPIAPSDQNTKRPGVIFVLEKAS 97
+S K+AK E TS+ + ++ G IPI + N ++ G++FVLEKAS
Sbjct: 40 ESSKKAKKESTSRAEEDNDEEEVTVEATAAAEDIVGGIPIVLNAPNKEKSGIVFVLEKAS 99
Query: 98 LEVAKVGKSYQILNSDDHSNFLRRNNKNPADYRPDIVHQALLSILDSRLTKAGRLQAVYV 157
LEVAKVGK+YQ+LNSDDH+NFL++NN+NPADYRPDI HQALL ILDS + KAGRL+AVYV
Sbjct: 100 LEVAKVGKTYQLLNSDDHANFLKKNNRNPADYRPDITHQALLMILDSPVNKAGRLKAVYV 159
Query: 158 RTDKGVLFEVKPHVRLPRTYKRFAGIMLQLLQKLSITAVGKREKLLRVIKNPVTQY-LPV 216
RT+KGVLFEVKPHVR+PRT+KRFAGIMLQLLQKLSITAV REKLLR +KNP+ ++ LPV
Sbjct: 160 RTEKGVLFEVKPHVRIPRTFKRFAGIMLQLLQKLSITAVNSREKLLRCVKNPIEEHHLPV 219
Query: 217 NSRKIGFSYSSEKLVKMRNYVASISDDD-NLVFVV 250
NS +IGFS+SSEKLV M+ ++A++ DDD + VFVV
Sbjct: 220 NSHRIGFSHSSEKLVNMQKHLATVCDDDRDTVFVV 254
>ASPGD|ASPL0000035794 [details] [associations]
symbol:AN2759 species:162425 "Emericella nidulans"
[GO:0000747 "conjugation with cellular fusion" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0070475 "rRNA
base methylation" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005880
"nuclear microtubule" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0070037 "rRNA (pseudouridine) methyltransferase activity"
evidence=IEA] InterPro:IPR005304 Pfam:PF03587 GO:GO:0005737
GO:GO:0005730 EMBL:BN001306 GO:GO:0003723 GO:GO:0008168
GO:GO:0032259 GO:GO:0005880 GO:GO:0030686 EMBL:AACD01000049
GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
eggNOG:COG1756 HOGENOM:HOG000193819 KO:K14568 OrthoDB:EOG41K2N7
PANTHER:PTHR12636 OMA:THQSLLM RefSeq:XP_660363.1
ProteinModelPortal:Q5B9M1 SMR:Q5B9M1 STRING:Q5B9M1
EnsemblFungi:CADANIAT00010350 GeneID:2874369 KEGG:ani:AN2759.2
Uniprot:Q5B9M1
Length = 260
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 88/186 (47%), Positives = 132/186 (70%)
Query: 75 IPIAPSDQNTKRPGVIFVLEKASLEVAKV---GKS-------YQILNSDDHSNFLRRNNK 124
+PIAP+D+ T+R +I VL ASLE K G++ Y +LNSD+H +R+ N+
Sbjct: 33 VPIAPNDKETQR--LIVVLSHASLETFKASHGGRNGTARDEKYSLLNSDEHIGVMRKMNR 90
Query: 125 NPADYRPDIVHQALLSILDSRLTKAGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRFAGIM 184
+ ++ RPDI HQ LL++LDS + KAG+LQ +Y+ T KGVL EV P VR+PRT+KRFAG+M
Sbjct: 91 DISEARPDITHQCLLTLLDSPVNKAGKLQ-IYIHTAKGVLIEVNPSVRIPRTFKRFAGLM 149
Query: 185 LQLLQKLSITAVGKREKLLRVIKNPVTQYLPVNSRKIGFSYSSEKLVKMRNYVASISDDD 244
+QLL +LSI + +EKLL+VIKNP+T +LP N RK+ SY + +V++++Y+ S+ +
Sbjct: 150 VQLLHRLSIRSTNSQEKLLKVIKNPITDHLPPNCRKVTLSYEAP-VVRVKDYIESLGPKE 208
Query: 245 NL-VFV 249
++ +FV
Sbjct: 209 SICIFV 214
>POMBASE|SPAC18G6.07c [details] [associations]
symbol:mra1 "rRNA (pseudouridine) methyltransferase
Mra1" species:4896 "Schizosaccharomyces pombe" [GO:0000747
"conjugation with cellular fusion" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0019236 "response to
pheromone" evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=ISO] [GO:0042274
"ribosomal small subunit biogenesis" evidence=ISO] [GO:0070037
"rRNA (pseudouridine) methyltransferase activity" evidence=ISO;ISS]
[GO:0070475 "rRNA base methylation" evidence=ISO]
InterPro:IPR005304 Pfam:PF03587 PomBase:SPAC18G6.07c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0019843 GO:GO:0000747 GO:GO:0019236 GO:GO:0032040
GO:GO:0042274 EMBL:D78582 PIR:T37921 RefSeq:NP_593671.1
ProteinModelPortal:Q10107 SMR:Q10107 STRING:Q10107 PRIDE:Q10107
EnsemblFungi:SPAC18G6.07c.1 GeneID:2542139 KEGG:spo:SPAC18G6.07c
eggNOG:COG1756 HOGENOM:HOG000193819 KO:K14568 OrthoDB:EOG41K2N7
NextBio:20803211 GO:GO:0070037 GO:GO:0070475 PANTHER:PTHR12636
Uniprot:Q10107
Length = 359
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 91/178 (51%), Positives = 120/178 (67%)
Query: 77 IAPSDQNTKRPGVIFVLEKASLEVAKVGKS----YQILNSDDHSNFLRRNNKNPADYRPD 132
I D T+R +I VL++A LE+ KVGK+ YQ+LN DDH L++ N+N A RPD
Sbjct: 140 IGSHDTTTQR--LIVVLDQACLEIYKVGKAKDAKYQLLNCDDHQGILKKLNRNIAQARPD 197
Query: 133 IVHQALLSILDSRLTKAGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRFAGIMLQLLQKLS 192
I HQ LL++LDS L KAGRLQ VY+ T K VL EV P VR+PRT+KRF+G+M+QLL KLS
Sbjct: 198 ITHQCLLTLLDSPLNKAGRLQ-VYIHTAKKVLIEVNPSVRIPRTFKRFSGLMVQLLHKLS 256
Query: 193 ITAVGKREKLLRVIKNPVTQYLPVNSRKIGFSYSSEKLVKMRNYVASISDDDNLVFVV 250
I +V EKLL+VIKNPVT YLP N RK S+ + V R Y+ ++ + ++ +
Sbjct: 257 IRSVNGNEKLLKVIKNPVTDYLPPNCRKATLSFDAPT-VPPRKYLETLQPNQSVCIAI 313
>WB|WBGene00012652 [details] [associations]
symbol:Y39A1A.14 species:6239 "Caenorhabditis elegans"
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR005304 Pfam:PF03587 GO:GO:0009792
GO:GO:0040007 GO:GO:0005730 GO:GO:0002119 GO:GO:0000003
GO:GO:0019843 eggNOG:COG1756 HOGENOM:HOG000193819 KO:K14568
GO:GO:0070037 PANTHER:PTHR12636 EMBL:AL031633 PIR:T26736
RefSeq:NP_499349.1 ProteinModelPortal:Q9XX15 SMR:Q9XX15
STRING:Q9XX15 PaxDb:Q9XX15 EnsemblMetazoa:Y39A1A.14.1
EnsemblMetazoa:Y39A1A.14.2 GeneID:176488 KEGG:cel:CELE_Y39A1A.14
UCSC:Y39A1A.14 CTD:176488 WormBase:Y39A1A.14
GeneTree:ENSGT00390000000305 InParanoid:Q9XX15 OMA:THQSLLM
NextBio:892792 Uniprot:Q9XX15
Length = 231
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 85/172 (49%), Positives = 120/172 (69%)
Query: 80 SDQNTKRPGVIFV-LEKASLEVAKVGKSYQILNSDDHSNFLRRNNKNPADYRPDIVHQAL 138
+D + +++V LE SLE AKVG Y IL+SD H+NFLR+ K+PADYRPDI+HQ L
Sbjct: 18 TDNQLEDKKILYVVLEGCSLETAKVGGEYAILSSDKHANFLRKQKKDPADYRPDILHQCL 77
Query: 139 LSILDSRLTKAGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRFAGIMLQLLQKLSITAVGK 198
L++LDS L +AG+L+ V+ RT K VL +V P R+PRT+ RF G+M+QLL KLSI A
Sbjct: 78 LNLLDSPLNRAGKLR-VFFRTSKNVLVDVSPQCRIPRTFDRFCGLMVQLLHKLSIRAAET 136
Query: 199 REKLLRVIKNPVTQYLPVNSRKIGFSYSSEKLVKMRNYVASISDDDNLVFVV 250
+KL+ V+KNPV+ +LPV SRK+ S++ +L M N + + D+ LV ++
Sbjct: 137 TQKLMSVVKNPVSNHLPVGSRKMLMSFNVPELT-MANKLVAPETDEPLVLII 187
>UNIPROTKB|Q9XX15 [details] [associations]
symbol:Y39A1A.14 "Ribosomal RNA small subunit
methyltransferase nep-1" species:6239 "Caenorhabditis elegans"
[GO:0070037 "rRNA (pseudouridine) methyltransferase activity"
evidence=ISS] InterPro:IPR005304 Pfam:PF03587 GO:GO:0009792
GO:GO:0040007 GO:GO:0005730 GO:GO:0002119 GO:GO:0000003
GO:GO:0019843 eggNOG:COG1756 HOGENOM:HOG000193819 KO:K14568
GO:GO:0070037 PANTHER:PTHR12636 EMBL:AL031633 PIR:T26736
RefSeq:NP_499349.1 ProteinModelPortal:Q9XX15 SMR:Q9XX15
STRING:Q9XX15 PaxDb:Q9XX15 EnsemblMetazoa:Y39A1A.14.1
EnsemblMetazoa:Y39A1A.14.2 GeneID:176488 KEGG:cel:CELE_Y39A1A.14
UCSC:Y39A1A.14 CTD:176488 WormBase:Y39A1A.14
GeneTree:ENSGT00390000000305 InParanoid:Q9XX15 OMA:THQSLLM
NextBio:892792 Uniprot:Q9XX15
Length = 231
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 85/172 (49%), Positives = 120/172 (69%)
Query: 80 SDQNTKRPGVIFV-LEKASLEVAKVGKSYQILNSDDHSNFLRRNNKNPADYRPDIVHQAL 138
+D + +++V LE SLE AKVG Y IL+SD H+NFLR+ K+PADYRPDI+HQ L
Sbjct: 18 TDNQLEDKKILYVVLEGCSLETAKVGGEYAILSSDKHANFLRKQKKDPADYRPDILHQCL 77
Query: 139 LSILDSRLTKAGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRFAGIMLQLLQKLSITAVGK 198
L++LDS L +AG+L+ V+ RT K VL +V P R+PRT+ RF G+M+QLL KLSI A
Sbjct: 78 LNLLDSPLNRAGKLR-VFFRTSKNVLVDVSPQCRIPRTFDRFCGLMVQLLHKLSIRAAET 136
Query: 199 REKLLRVIKNPVTQYLPVNSRKIGFSYSSEKLVKMRNYVASISDDDNLVFVV 250
+KL+ V+KNPV+ +LPV SRK+ S++ +L M N + + D+ LV ++
Sbjct: 137 TQKLMSVVKNPVSNHLPVGSRKMLMSFNVPELT-MANKLVAPETDEPLVLII 187
>SGD|S000004176 [details] [associations]
symbol:EMG1 "Methyltransferase for rRNA" species:4932
"Saccharomyces cerevisiae" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0030686
"90S preribosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IGI;IMP] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0005880 "nuclear microtubule" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] [GO:0032040 "small-subunit
processome" evidence=IDA] [GO:0070475 "rRNA base methylation"
evidence=ISO;IMP] [GO:0070037 "rRNA (pseudouridine)
methyltransferase activity" evidence=ISO;IMP] InterPro:IPR005304
Pfam:PF03587 SGD:S000004176 GO:GO:0005737 GO:GO:0005730
EMBL:BK006945 GO:GO:0019843 EMBL:U17246 GO:GO:0005880 GO:GO:0030686
GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
eggNOG:COG1756 KO:K14568 OrthoDB:EOG41K2N7 GO:GO:0070037
GO:GO:0070475 PANTHER:PTHR12636 GeneTree:ENSGT00390000000305
OMA:THQSLLM EMBL:AY557941 PIR:S51431 RefSeq:NP_013287.1 PDB:2V3J
PDB:2V3K PDB:3OII PDB:3OIJ PDB:3OIN PDBsum:2V3J PDBsum:2V3K
PDBsum:3OII PDBsum:3OIJ PDBsum:3OIN ProteinModelPortal:Q06287
SMR:Q06287 DIP:DIP-6504N IntAct:Q06287 MINT:MINT-658100
STRING:Q06287 PaxDb:Q06287 PeptideAtlas:Q06287 EnsemblFungi:YLR186W
GeneID:850883 KEGG:sce:YLR186W CYGD:YLR186w
EvolutionaryTrace:Q06287 NextBio:967239 Genevestigator:Q06287
GermOnline:YLR186W Uniprot:Q06287
Length = 252
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 85/182 (46%), Positives = 127/182 (69%)
Query: 76 PIAPS-DQNTKRPGVIFVLEKASLEVAKV------GKSYQILNSDDHSNFLRRNNKNPAD 128
P+ S D+ TKR +I VL ASLE K+ G Y +LN DDH L++ ++ ++
Sbjct: 29 PVLTSKDKITKR--MIVVLAMASLETHKISSNGPGGDKYVLLNCDDHQGLLKKMGRDISE 86
Query: 129 YRPDIVHQALLSILDSRLTKAGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRFAGIMLQLL 188
RPDI HQ LL++LDS + KAG+LQ VY++T +G+L EV P VR+PRT+KRF+G+M+QLL
Sbjct: 87 ARPDITHQCLLTLLDSPINKAGKLQ-VYIQTSRGILIEVNPTVRIPRTFKRFSGLMVQLL 145
Query: 189 QKLSITAVGKREKLLRVIKNPVTQYLPVNSRKIGFSYSSEKLVKMRNYVASISDDDNL-V 247
KLSI +V EKLL+VIKNP+T +LP RK+ S+ + ++++++Y+ + DD+++ V
Sbjct: 146 HKLSIRSVNSEEKLLKVIKNPITDHLPTKCRKVTLSFDAP-VIRVQDYIEKLDDDESICV 204
Query: 248 FV 249
FV
Sbjct: 205 FV 206
>RGD|1307665 [details] [associations]
symbol:Emg1 "EMG1 nucleolar protein homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0070037 "rRNA (pseudouridine)
methyltransferase activity" evidence=ISO] InterPro:IPR005304
Pfam:PF03587 RGD:1307665 GO:GO:0008168 GO:GO:0032259 EMBL:CH473964
KO:K14568 PANTHER:PTHR12636 GeneTree:ENSGT00390000000305
OMA:THQSLLM CTD:10436 OrthoDB:EOG43N7DH IPI:IPI00192021
RefSeq:NP_001101358.2 UniGene:Rn.162786 Ensembl:ENSRNOT00000017334
GeneID:312706 KEGG:rno:312706 UCSC:RGD:1307665 Uniprot:D3ZDS4
Length = 244
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 84/162 (51%), Positives = 111/162 (68%)
Query: 89 VIFVLEKASLEVAKVGKSYQILNSDDHSNFLRRNNKNPADYRPDIVHQALLSILDSRLTK 148
+I VLE ASLE KVGK+Y++LN D H + L +N ++P + RPDI HQ+LL ++DS L +
Sbjct: 43 LIVVLEGASLETVKVGKTYELLNCDKHKSMLLKNGRDPGEVRPDITHQSLLMLMDSPLNR 102
Query: 149 AGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRFAGIMLQLLQKLSITAVGKREKLLRVIKN 208
AG LQ VY+ T K VL EV P R+PRT+ RF G+M+QLL KLS+ A +KLL+VIKN
Sbjct: 103 AGLLQ-VYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKN 161
Query: 209 PVTQYLPVNSRKIGFSYSSEKLVKMRNYVASISDDDNLVFVV 250
PV+ + PV KIG S+S E + +R V S D +VFVV
Sbjct: 162 PVSDHFPVGCMKIGTSFSVEDISDIRELVPS---SDPVVFVV 200
>MGI|MGI:1315195 [details] [associations]
symbol:Emg1 "EMG1 nucleolar protein homolog (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0032259 "methylation"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0070037 "rRNA (pseudouridine) methyltransferase activity"
evidence=ISO] InterPro:IPR005304 Pfam:PF03587 MGI:MGI:1315195
GO:GO:0005730 GO:GO:0019843 EMBL:AC002397 eggNOG:COG1756
HOGENOM:HOG000193819 KO:K14568 GO:GO:0070037 PANTHER:PTHR12636
OMA:THQSLLM CTD:10436 HOVERGEN:HBG029983 ChiTaRS:EMG1 EMBL:BC002004
IPI:IPI00127554 RefSeq:NP_038564.1 UniGene:Mm.6390
ProteinModelPortal:O35130 SMR:O35130 STRING:O35130
PhosphoSite:O35130 PaxDb:O35130 PRIDE:O35130 DNASU:14791
Ensembl:ENSMUST00000004379 GeneID:14791 KEGG:mmu:14791
InParanoid:O35130 OrthoDB:EOG43N7DH NextBio:286931 Bgee:O35130
CleanEx:MM_EMG1 Genevestigator:O35130 GermOnline:ENSMUSG00000004268
Uniprot:O35130
Length = 244
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 84/162 (51%), Positives = 111/162 (68%)
Query: 89 VIFVLEKASLEVAKVGKSYQILNSDDHSNFLRRNNKNPADYRPDIVHQALLSILDSRLTK 148
+I VLE ASLE KVGK+Y++LN D H + L +N ++P + RPDI HQ+LL ++DS L +
Sbjct: 43 LIVVLEGASLETVKVGKTYELLNCDRHKSMLLKNGRDPGEVRPDITHQSLLMLMDSPLNR 102
Query: 149 AGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRFAGIMLQLLQKLSITAVGKREKLLRVIKN 208
AG LQ VY+ T K VL EV P R+PRT+ RF G+M+QLL KLS+ A +KLL+VIKN
Sbjct: 103 AGLLQ-VYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKN 161
Query: 209 PVTQYLPVNSRKIGFSYSSEKLVKMRNYVASISDDDNLVFVV 250
PV+ + PV KIG S+S E + +R V S D +VFVV
Sbjct: 162 PVSDHFPVGCMKIGTSFSVEDISDIRELVPS---SDPVVFVV 200
>UNIPROTKB|E2RKH8 [details] [associations]
symbol:EMG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] InterPro:IPR005304 Pfam:PF03587 GO:GO:0008168
GO:GO:0032259 KO:K14568 PANTHER:PTHR12636
GeneTree:ENSGT00390000000305 OMA:THQSLLM CTD:10436
EMBL:AAEX03015269 RefSeq:XP_853373.1 Ensembl:ENSCAFT00000022923
GeneID:477708 KEGG:cfa:477708 NextBio:20853136 Uniprot:E2RKH8
Length = 244
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 83/162 (51%), Positives = 110/162 (67%)
Query: 89 VIFVLEKASLEVAKVGKSYQILNSDDHSNFLRRNNKNPADYRPDIVHQALLSILDSRLTK 148
+I VLE ASLE KVGK+Y++LN D H + L +N ++P + RPDI HQ+LL ++DS L +
Sbjct: 43 LIVVLEGASLETVKVGKTYELLNCDKHKSVLLKNGRDPGEVRPDIAHQSLLMLMDSPLNR 102
Query: 149 AGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRFAGIMLQLLQKLSITAVGKREKLLRVIKN 208
AG LQ VY+ T K VL EV P R+PRT+ RF G+M+QLL KLS+ A +KLL+VIKN
Sbjct: 103 AGLLQ-VYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKN 161
Query: 209 PVTQYLPVNSRKIGFSYSSEKLVKMRNYVASISDDDNLVFVV 250
PV+ + PV KIG S+S + +R V S D +VFVV
Sbjct: 162 PVSDHFPVGCMKIGTSFSIPVVSDVRELVPS---SDPIVFVV 200
>UNIPROTKB|I3LPQ4 [details] [associations]
symbol:EMG1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008168 "methyltransferase activity" evidence=IEA]
InterPro:IPR005304 Pfam:PF03587 GO:GO:0008168 GO:GO:0032259
PANTHER:PTHR12636 GeneTree:ENSGT00390000000305 OMA:THQSLLM
EMBL:FP325257 Ensembl:ENSSSCT00000025035 Uniprot:I3LPQ4
Length = 244
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 83/162 (51%), Positives = 110/162 (67%)
Query: 89 VIFVLEKASLEVAKVGKSYQILNSDDHSNFLRRNNKNPADYRPDIVHQALLSILDSRLTK 148
+I VLE ASLE KVGK+Y++LN D H + L +N ++P + RPDI HQ+LL ++DS L +
Sbjct: 43 LIVVLEGASLETVKVGKTYELLNCDKHKSMLLKNGRDPGEVRPDIAHQSLLMLMDSPLNR 102
Query: 149 AGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRFAGIMLQLLQKLSITAVGKREKLLRVIKN 208
AG LQ VY+ T K VL EV P R+PRT+ RF G+M+QLL KLS+ A +KLL+VIKN
Sbjct: 103 AGLLQ-VYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKN 161
Query: 209 PVTQYLPVNSRKIGFSYSSEKLVKMRNYVASISDDDNLVFVV 250
PV+ + PV KIG S+S + +R V S D +VFVV
Sbjct: 162 PVSDHFPVGCMKIGTSFSIPVVSDVRELVPS---SDPVVFVV 200
>UNIPROTKB|Q92979 [details] [associations]
symbol:EMG1 "Ribosomal RNA small subunit methyltransferase
NEP1" species:9606 "Homo sapiens" [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0070037
"rRNA (pseudouridine) methyltransferase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=ISS] InterPro:IPR005304 Pfam:PF03587
GO:GO:0005737 GO:GO:0005730 GO:GO:0003723 GO:GO:0019843 EMBL:U47924
GO:GO:0042274 eggNOG:COG1756 HOGENOM:HOG000193819 KO:K14568
GO:GO:0070037 PANTHER:PTHR12636 EMBL:U72514 EMBL:BC055314
IPI:IPI00025347 RefSeq:NP_006322.4 UniGene:Hs.731673
ProteinModelPortal:Q92979 SMR:Q92979 IntAct:Q92979
MINT:MINT-1367632 STRING:Q92979 PhosphoSite:Q92979 DMDM:20532172
PaxDb:Q92979 PRIDE:Q92979 DNASU:10436 GeneID:10436 KEGG:hsa:10436
UCSC:uc001qsh.4 CTD:10436 GeneCards:GC12P007079 HGNC:HGNC:16912
MIM:211180 MIM:611531 neXtProt:NX_Q92979 Orphanet:1270
PharmGKB:PA142671909 HOVERGEN:HBG029983 InParanoid:Q92979
ChiTaRS:EMG1 GenomeRNAi:10436 NextBio:39554 CleanEx:HS_EMG1
Genevestigator:Q92979 GermOnline:ENSG00000126749 Uniprot:Q92979
Length = 244
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 82/162 (50%), Positives = 110/162 (67%)
Query: 89 VIFVLEKASLEVAKVGKSYQILNSDDHSNFLRRNNKNPADYRPDIVHQALLSILDSRLTK 148
+I VLE ASLE KVGK+Y++LN D H + L +N ++P + RPDI HQ+LL ++DS L +
Sbjct: 43 LIVVLEGASLETVKVGKTYELLNCDKHKSILLKNGRDPGEARPDITHQSLLMLMDSPLNR 102
Query: 149 AGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRFAGIMLQLLQKLSITAVGKREKLLRVIKN 208
AG LQ VY+ T K VL EV P R+PRT+ RF G+M+QLL KLS+ A +KLL+VIKN
Sbjct: 103 AGLLQ-VYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKN 161
Query: 209 PVTQYLPVNSRKIGFSYSSEKLVKMRNYVASISDDDNLVFVV 250
PV+ + PV K+G S+S + +R V S D +VFVV
Sbjct: 162 PVSDHFPVGCMKVGTSFSIPVVSDVRELVPS---SDPIVFVV 200
>CGD|CAL0001059 [details] [associations]
symbol:NEP1 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IGI;ISS] [GO:0030686 "90S preribosome" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005880
"nuclear microtubule" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0000747
"conjugation with cellular fusion" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR005304 Pfam:PF03587
CGD:CAL0001059 GO:GO:0005730 GO:GO:0042254 GO:GO:0008168
GO:GO:0032259 EMBL:AACQ01000117 EMBL:AACQ01000116 KO:K14568
PANTHER:PTHR12636 RefSeq:XP_713798.1 RefSeq:XP_713838.1
ProteinModelPortal:Q59W59 SMR:Q59W59 STRING:Q59W59 GeneID:3644526
GeneID:3644545 KEGG:cal:CaO19.665 KEGG:cal:CaO19.8282
Uniprot:Q59W59
Length = 267
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 85/187 (45%), Positives = 129/187 (68%)
Query: 75 IPIAPS-----DQNTKRPGVIFVLEKASLEVAKV------GKSYQILNSDDHSNFLRRNN 123
+P+ P+ D+ T+R +I VL +A LE K+ G + +LN DDH LR+
Sbjct: 39 VPVQPTALTSRDKTTQR--LIVVLSQACLETYKMNSGGPGGDRFALLNCDDHQGLLRKMG 96
Query: 124 KNPADYRPDIVHQALLSILDSRLTKAGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRFAGI 183
++ A+ RPDI HQ LL++LDS + KAGRLQ VY++T +GVL EV P VR+PRT+KRF+G+
Sbjct: 97 RDIAEARPDITHQCLLTLLDSPINKAGRLQ-VYIQTARGVLIEVNPSVRIPRTFKRFSGL 155
Query: 184 MLQLLQKLSITAVGKREKLLRVIKNPVTQYLPVNSRKIGFSYSSEKLVKMRNYVASISDD 243
M+QLL KLSI + +E LL+VIKNP+T +LP RK+ S+ +E L ++++YV ++ ++
Sbjct: 156 MVQLLHKLSIRSENSKEVLLKVIKNPITDHLPTKCRKVTLSFDAE-LKRVQDYVTTLDEN 214
Query: 244 DNL-VFV 249
+++ VFV
Sbjct: 215 ESICVFV 221
>UNIPROTKB|Q59W59 [details] [associations]
symbol:NEP1 "Putative uncharacterized protein NEP1"
species:237561 "Candida albicans SC5314" [GO:0005730 "nucleolus"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IGI]
InterPro:IPR005304 Pfam:PF03587 CGD:CAL0001059 GO:GO:0005730
GO:GO:0042254 GO:GO:0008168 GO:GO:0032259 EMBL:AACQ01000117
EMBL:AACQ01000116 KO:K14568 PANTHER:PTHR12636 RefSeq:XP_713798.1
RefSeq:XP_713838.1 ProteinModelPortal:Q59W59 SMR:Q59W59
STRING:Q59W59 GeneID:3644526 GeneID:3644545 KEGG:cal:CaO19.665
KEGG:cal:CaO19.8282 Uniprot:Q59W59
Length = 267
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 85/187 (45%), Positives = 129/187 (68%)
Query: 75 IPIAPS-----DQNTKRPGVIFVLEKASLEVAKV------GKSYQILNSDDHSNFLRRNN 123
+P+ P+ D+ T+R +I VL +A LE K+ G + +LN DDH LR+
Sbjct: 39 VPVQPTALTSRDKTTQR--LIVVLSQACLETYKMNSGGPGGDRFALLNCDDHQGLLRKMG 96
Query: 124 KNPADYRPDIVHQALLSILDSRLTKAGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRFAGI 183
++ A+ RPDI HQ LL++LDS + KAGRLQ VY++T +GVL EV P VR+PRT+KRF+G+
Sbjct: 97 RDIAEARPDITHQCLLTLLDSPINKAGRLQ-VYIQTARGVLIEVNPSVRIPRTFKRFSGL 155
Query: 184 MLQLLQKLSITAVGKREKLLRVIKNPVTQYLPVNSRKIGFSYSSEKLVKMRNYVASISDD 243
M+QLL KLSI + +E LL+VIKNP+T +LP RK+ S+ +E L ++++YV ++ ++
Sbjct: 156 MVQLLHKLSIRSENSKEVLLKVIKNPITDHLPTKCRKVTLSFDAE-LKRVQDYVTTLDEN 214
Query: 244 DNL-VFV 249
+++ VFV
Sbjct: 215 ESICVFV 221
>UNIPROTKB|F1N532 [details] [associations]
symbol:EMG1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008168 "methyltransferase activity" evidence=IEA]
InterPro:IPR005304 Pfam:PF03587 GO:GO:0008168 GO:GO:0032259
KO:K14568 PANTHER:PTHR12636 GeneTree:ENSGT00390000000305
OMA:THQSLLM CTD:10436 EMBL:DAAA02014453 IPI:IPI00716727
RefSeq:NP_001039662.2 UniGene:Bt.111383 Ensembl:ENSBTAT00000017445
GeneID:515362 KEGG:bta:515362 NextBio:20871789 Uniprot:F1N532
Length = 244
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 82/162 (50%), Positives = 109/162 (67%)
Query: 89 VIFVLEKASLEVAKVGKSYQILNSDDHSNFLRRNNKNPADYRPDIVHQALLSILDSRLTK 148
+I VLE ASLE KVGK+Y++LN D H + L +N ++P + RPDI HQ+LL ++DS L +
Sbjct: 43 LIVVLEGASLETVKVGKTYELLNCDKHKSMLLKNGRDPGEVRPDIAHQSLLMLMDSPLNR 102
Query: 149 AGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRFAGIMLQLLQKLSITAVGKREKLLRVIKN 208
AG LQ VY+ T K VL EV P R+PRT+ RF G+M+QLL KLS+ A +KLL+VIKN
Sbjct: 103 AGLLQ-VYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKN 161
Query: 209 PVTQYLPVNSRKIGFSYSSEKLVKMRNYVASISDDDNLVFVV 250
PV+ + PV KIG S+S + +R S D +VFVV
Sbjct: 162 PVSDHFPVGCMKIGTSFSVPVVSDVRELAPS---SDPIVFVV 200
>UNIPROTKB|F1N832 [details] [associations]
symbol:EMG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008168 "methyltransferase activity" evidence=IEA]
InterPro:IPR005304 Pfam:PF03587 GO:GO:0008168 GO:GO:0032259
PANTHER:PTHR12636 GeneTree:ENSGT00390000000305 OMA:THQSLLM
EMBL:AADN02061112 IPI:IPI00574378 Ensembl:ENSGALT00000023493
Uniprot:F1N832
Length = 238
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 75/149 (50%), Positives = 103/149 (69%)
Query: 89 VIFVLEKASLEVAKVGKSYQILNSDDHSNFLRRNNKNPADYRPDIVHQALLSILDSRLTK 148
++ VLE ASLE KVGK++++LN D H L R+ ++P + RPDI HQ+LL ++DS L +
Sbjct: 37 LLVVLEGASLETVKVGKTFELLNCDKHKALLLRSGRDPGEVRPDITHQSLLMLMDSPLNR 96
Query: 149 AGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRFAGIMLQLLQKLSITAVGKREKLLRVIKN 208
AG LQ VY+ T K VL EV P R+PRT+ RF G+M+QLL KLS+ A +KLL+VIKN
Sbjct: 97 AGLLQ-VYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKN 155
Query: 209 PVTQYLPVNSRKIGFSYSSEKLVKMRNYV 237
PV+ +LPV KIG S++ + +R V
Sbjct: 156 PVSDHLPVGCMKIGTSFAVPNVTDLRELV 184
>DICTYBASE|DDB_G0272732 [details] [associations]
symbol:emg1 "putative ribosome biogenesis protein"
species:44689 "Dictyostelium discoideum" [GO:0032259 "methylation"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=ISS] [GO:0030515 "snoRNA binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] InterPro:IPR005304 Pfam:PF03587
dictyBase:DDB_G0272732 GO:GO:0005737 GO:GO:0005730 GO:GO:0030515
GenomeReviews:CM000151_GR EMBL:AAFI02000008 GO:GO:0008168
GO:GO:0032259 GO:GO:0042274 eggNOG:COG1756 KO:K14568
PANTHER:PTHR12636 RefSeq:XP_644981.1 ProteinModelPortal:Q7KWM6
SMR:Q7KWM6 STRING:Q7KWM6 EnsemblProtists:DDB0238378 GeneID:8618658
KEGG:ddi:DDB_G0272732 OMA:VIGAMST Uniprot:Q7KWM6
Length = 338
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 78/171 (45%), Positives = 116/171 (67%)
Query: 82 QNTKRPGVIFVLEKASLEVAKVGKSYQILNSDDHSNFLRRNNKNPADYRPDIVHQALLSI 141
++TK+ +I VLE A+L+ KV +S+Q+LN DDH++ L+++ K ++ RPDI+HQ LL++
Sbjct: 11 KDTKK--LIIVLEHATLDTVKVKESFQLLNCDDHADILKKHGKEASEARPDILHQCLLAL 68
Query: 142 LDSRLTKAGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRFAGIMLQLLQKLSITAVGKREK 201
DS L KAG LQ V+++T K VL EV P R+PRT+ RFAG+M+QLL+KLSI A +K
Sbjct: 69 FDSPLNKAGLLQ-VFIKTTKNVLIEVHPQTRIPRTFNRFAGLMVQLLKKLSIRATNGPDK 127
Query: 202 LLRVIKNPVTQYLPVNSRKIGFSYSSEKLVKMRNYVASISDDDNLVFVVCS 252
L +VIKNP+T +L ++ S+S+ K V + +V I D L + S
Sbjct: 128 LFKVIKNPITDHLAPGTKIYATSFSAPKCVDLFEFVPEIFGYDPLPVIPVS 178
>FB|FBgn0029714 [details] [associations]
symbol:CG3527 species:7227 "Drosophila melanogaster"
[GO:0006364 "rRNA processing" evidence=NAS] [GO:0042274 "ribosomal
small subunit biogenesis" evidence=NAS] [GO:0005730 "nucleolus"
evidence=NAS] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR005304 Pfam:PF03587 GO:GO:0005730 GO:GO:0022008
EMBL:AE014298 GO:GO:0042742 GO:GO:0019843 eggNOG:COG1756 KO:K14568
GO:GO:0070037 PANTHER:PTHR12636 GeneTree:ENSGT00390000000305
OMA:THQSLLM RefSeq:NP_572170.1 UniGene:Dm.17712
ProteinModelPortal:Q9W4J5 SMR:Q9W4J5 DIP:DIP-23557N
MINT:MINT-760426 STRING:Q9W4J5 PaxDb:Q9W4J5
EnsemblMetazoa:FBtr0070678 GeneID:31387 KEGG:dme:Dmel_CG3527
UCSC:CG3527-RA FlyBase:FBgn0029714 InParanoid:Q9W4J5
OrthoDB:EOG43J9MR PhylomeDB:Q9W4J5 GenomeRNAi:31387 NextBio:773388
Bgee:Q9W4J5 GermOnline:CG3527 Uniprot:Q9W4J5
Length = 252
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 77/173 (44%), Positives = 108/173 (62%)
Query: 83 NTKRPGVIFVLEKASLEVAKVGKSYQILNSDDHSNFLRRNNKNPADYRPDIVHQALLSIL 142
N +I VLE A LE KV ++++LN DDH+ +R+N ++P RPDI HQ LL +
Sbjct: 37 NATEKRLIIVLEGAQLETVKVHNTFELLNCDDHAGIMRKNQRDPGSCRPDITHQCLLMLF 96
Query: 143 DSRLTKAGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRFAGIMLQLLQKLSITAVGKREKL 202
DS L +AG LQ V+VRT+ VL E+ P R+PRT+KRFAG+M+QLL K I A +L
Sbjct: 97 DSPLNRAGLLQ-VFVRTEHNVLIEINPQTRIPRTFKRFAGLMVQLLHKFQIRANDSSRRL 155
Query: 203 LRVIKNPVTQYLPVNSRKIGFSYSSEKLVKMRNYV-----ASISDDDNLVFVV 250
+ VIKNP+T ++PV +K S+S + L R+ V S S D+ +V V+
Sbjct: 156 MSVIKNPITDHVPVGCKKYAMSFSGKLLPNCRDLVPHGDETSASYDEPVVIVI 208
>ZFIN|ZDB-GENE-060421-2909 [details] [associations]
symbol:zgc:136360 "zgc:136360" species:7955 "Danio
rerio" [GO:0008168 "methyltransferase activity" evidence=IEA]
InterPro:IPR005304 Pfam:PF03587 ZFIN:ZDB-GENE-060421-2909
GO:GO:0008168 GO:GO:0032259 eggNOG:COG1756 HOGENOM:HOG000193819
KO:K14568 PANTHER:PTHR12636 HOVERGEN:HBG029983 OrthoDB:EOG43N7DH
EMBL:BC115095 IPI:IPI00759094 RefSeq:NP_001035427.1
UniGene:Dr.41525 ProteinModelPortal:Q1RM81 STRING:Q1RM81
PRIDE:Q1RM81 GeneID:678588 KEGG:dre:678588 InParanoid:Q1RM81
NextBio:20902413 Bgee:Q1RM81 Uniprot:Q1RM81
Length = 238
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 75/170 (44%), Positives = 108/170 (63%)
Query: 81 DQNTKRPGVIFVLEKASLEVAKVGKSYQILNSDDHSNFLRRNNKNPADYRPDIVHQALLS 140
DQ T++ V+ VLE A+LE KVGK++++LN D H + + ++ ++P RPDI HQ LL
Sbjct: 30 DQMTEKRLVV-VLEGATLETVKVGKTFELLNCDQHKSMIIKSGRDPGKIRPDIAHQCLLM 88
Query: 141 ILDSRLTKAGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRFAGIMLQLLQKLSITAVGKRE 200
+LDS L +AG LQ VY+ T+K VL E+ P R+PRT+ RF G+M+QLL KLS+ A +
Sbjct: 89 LLDSPLNRAGLLQ-VYIHTEKNVLIEINPQTRIPRTFARFCGLMVQLLHKLSVRAADGPQ 147
Query: 201 KLLRVIKNPVTQYLPVNSRKIGFSYSSEKLVKMRNYVASISDDDNLVFVV 250
+LLR+IKNPV+ +LP + S+ + V R V DD V+
Sbjct: 148 RLLRLIKNPVSDHLPPGCPRFSTSFKAGDAVCPRTIVP---DDGPAAIVI 194
>UNIPROTKB|Q96UP2 [details] [associations]
symbol:NEP1 "Ribosomal RNA small subunit methyltransferase
NEP1" species:284593 "Candida glabrata CBS 138" [GO:0070037 "rRNA
(pseudouridine) methyltransferase activity" evidence=ISS]
InterPro:IPR005304 Pfam:PF03587 GO:GO:0005730 GO:GO:0019843
HOGENOM:HOG000193819 KO:K14568 OrthoDB:EOG41K2N7 GO:GO:0070037
PANTHER:PTHR12636 OMA:THQSLLM EMBL:AY034788 EMBL:AY181247
EMBL:CR380948 RefSeq:XP_445023.1 ProteinModelPortal:Q96UP2
SMR:Q96UP2 GeneID:2886681 GenomeReviews:CR380948_GR
KEGG:cgr:CAGL0B01232g Uniprot:Q96UP2
Length = 229
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 77/166 (46%), Positives = 107/166 (64%)
Query: 74 GIPIAPSDQNTKRPGVIFVLEKASLEV-AKVGKSYQILNSDDHSNFLRRNNKNPADYRPD 132
G P S + P + VL +ASLE +LN DDH LR+ ++ A+ RPD
Sbjct: 10 GGPNNSSVTKKQEPRLYVVLCEASLETYTSNDHRTSLLNCDDHQGILRKMGRDIAEARPD 69
Query: 133 IVHQALLSILDSRLTKAGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRFAGIMLQLLQKLS 192
I HQ LL++LDS + KAG LQ VY+ T K VL EV P VR+PRT+KRF+G+M+QLL KLS
Sbjct: 70 ITHQCLLTLLDSPINKAGLLQ-VYILTKKNVLIEVNPSVRIPRTFKRFSGLMVQLLHKLS 128
Query: 193 ITAV-GKREKLLRVIKNPVTQYLPVNSRKIGFSYSSEKLVKMRNYV 237
I ++ LLRV+KNPVT+YLP + RK+ S+ +E +++ + Y+
Sbjct: 129 IRSMESSNTHLLRVVKNPVTKYLPADCRKVTLSFDAE-VMRPQEYL 173
>GENEDB_PFALCIPARUM|PF08_0041 [details] [associations]
symbol:PF08_0041 "ribosome biogenesis protein
nep1 homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR005304
Pfam:PF03587 GO:GO:0042254 GO:GO:0008168 GO:GO:0032259
EMBL:AL844507 HOGENOM:HOG000193819 KO:K14568 PANTHER:PTHR12636
OMA:THQSLLM RefSeq:XP_001349310.1 ProteinModelPortal:Q8IB49
IntAct:Q8IB49 MINT:MINT-1568361 EnsemblProtists:PF08_0041:mRNA
GeneID:2655492 KEGG:pfa:PF08_0041 EuPathDB:PlasmoDB:PF3D7_0821500
ProtClustDB:CLSZ2433261 Uniprot:Q8IB49
Length = 279
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 71/205 (34%), Positives = 117/205 (57%)
Query: 81 DQNTKRPGVIFVLEKASLEVAKVGKS-YQILNSDDHSNFLRRNN---KNPADYRPDIVHQ 136
D+ K+ VI +LE A L++ +V + Y++ NS H N L++N +N ++RPDI+HQ
Sbjct: 61 DEQRKKKKVIIILEGACLQLIEVKRFIYELANSRKHKNILKKNKVDEENIKNFRPDILHQ 120
Query: 137 ALLSILDSRLTKAGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRFAGIMLQLLQKLSITAV 196
L+ +L+S L K G LQ +Y++T LF V ++++P+T+++F +M+ L+K I A
Sbjct: 121 CLIHLLESPLNKFGYLQ-IYIKTHDNQLFYVSSNLKIPKTFQQFESLMVTFLRKYKIKAN 179
Query: 197 GKREKLLRVIKNPVTQYLPVNSRKIGFSYSSEKLVKMRNYVASISDDDNLVFVVCSEVIS 256
K LL++IKN + LP+N KIG S +K V++ NY+ + + V + I
Sbjct: 180 EKNIYLLKIIKNDLQNILPINGHKIGLSLKGKK-VELNNYIKVYKNTNQPV----TFFIG 234
Query: 257 AYIYGDLFFHIYILSDINLYFSCLS 281
A Y + + IL D N+ S S
Sbjct: 235 AVAYSNPTMKLQILDD-NISISDFS 258
>UNIPROTKB|Q8IB49 [details] [associations]
symbol:PF08_0041 "Ribosome biogenesis protein nep1
homologue, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR005304
Pfam:PF03587 GO:GO:0042254 GO:GO:0008168 GO:GO:0032259
EMBL:AL844507 HOGENOM:HOG000193819 KO:K14568 PANTHER:PTHR12636
OMA:THQSLLM RefSeq:XP_001349310.1 ProteinModelPortal:Q8IB49
IntAct:Q8IB49 MINT:MINT-1568361 EnsemblProtists:PF08_0041:mRNA
GeneID:2655492 KEGG:pfa:PF08_0041 EuPathDB:PlasmoDB:PF3D7_0821500
ProtClustDB:CLSZ2433261 Uniprot:Q8IB49
Length = 279
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 71/205 (34%), Positives = 117/205 (57%)
Query: 81 DQNTKRPGVIFVLEKASLEVAKVGKS-YQILNSDDHSNFLRRNN---KNPADYRPDIVHQ 136
D+ K+ VI +LE A L++ +V + Y++ NS H N L++N +N ++RPDI+HQ
Sbjct: 61 DEQRKKKKVIIILEGACLQLIEVKRFIYELANSRKHKNILKKNKVDEENIKNFRPDILHQ 120
Query: 137 ALLSILDSRLTKAGRLQAVYVRTDKGVLFEVKPHVRLPRTYKRFAGIMLQLLQKLSITAV 196
L+ +L+S L K G LQ +Y++T LF V ++++P+T+++F +M+ L+K I A
Sbjct: 121 CLIHLLESPLNKFGYLQ-IYIKTHDNQLFYVSSNLKIPKTFQQFESLMVTFLRKYKIKAN 179
Query: 197 GKREKLLRVIKNPVTQYLPVNSRKIGFSYSSEKLVKMRNYVASISDDDNLVFVVCSEVIS 256
K LL++IKN + LP+N KIG S +K V++ NY+ + + V + I
Sbjct: 180 EKNIYLLKIIKNDLQNILPINGHKIGLSLKGKK-VELNNYIKVYKNTNQPV----TFFIG 234
Query: 257 AYIYGDLFFHIYILSDINLYFSCLS 281
A Y + + IL D N+ S S
Sbjct: 235 AVAYSNPTMKLQILDD-NISISDFS 258
>UNIPROTKB|Q57977 [details] [associations]
symbol:nep1 "Ribosomal RNA small subunit methyltransferase
Nep1" species:243232 "Methanocaldococcus jannaschii DSM 2661"
[GO:0019843 "rRNA binding" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0070037 "rRNA
(pseudouridine) methyltransferase activity" evidence=IDA]
HAMAP:MF_00554 InterPro:IPR005304 InterPro:IPR023503 Pfam:PF03587
GO:GO:0042803 GO:GO:0019843 EMBL:L77117 GenomeReviews:L77117_GR
eggNOG:COG1756 KO:K14568 GO:GO:0070037 PANTHER:PTHR12636 PIR:E64369
RefSeq:NP_247536.1 PDB:3BBD PDB:3BBE PDB:3BBH PDBsum:3BBD
PDBsum:3BBE PDBsum:3BBH ProteinModelPortal:Q57977 SMR:Q57977
GeneID:1451422 KEGG:mja:MJ_0557 OMA:SPINHEK ProtClustDB:PRK04171
EvolutionaryTrace:Q57977 Uniprot:Q57977
Length = 205
Score = 160 (61.4 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 42/137 (30%), Positives = 73/137 (53%)
Query: 95 KASLEVAKVGKSYQILNSDDHSNFLRRNNKNPADYRPDIVHQALLSILDSRLTKAGRLQA 154
K + ++V K Y IL+S+ H + + RPDI+H +LL+ILDS + +L
Sbjct: 20 KNKIRKSRVYK-YDILDSNYHYKAMEKLKDKEMRGRPDIIHISLLNILDSPINHEKKLN- 77
Query: 155 VYVRTDKGVLFEVKPHVRLPRTYKRFAGIMLQLLQKLSITAVGKREKLLRVIKNPVTQYL 214
+Y+ T + ++ P RLPR Y RF G+M ++L+ G+R L+++ + + L
Sbjct: 78 IYIHTYDDKVLKINPETRLPRNYFRFLGVMEKVLK-------GERNHLIKMEEKTLEDLL 130
Query: 215 -PVNSRKIGFSYSSEKL 230
+N++KI + KL
Sbjct: 131 NEINAKKIAIMTKTGKL 147
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 301 260 0.00089 114 3 11 22 0.42 33
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 597 (63 KB)
Total size of DFA: 177 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.56u 0.10s 21.66t Elapsed: 00:00:01
Total cpu time: 21.57u 0.10s 21.67t Elapsed: 00:00:01
Start: Sat May 11 09:05:53 2013 End: Sat May 11 09:05:54 2013