Your job contains 1 sequence.
>022178
MEACCLTSNSFNKTTELVPVSKARVVSYTKRNHNLNHFHCKRVGFSSSITCCHLESSLPS
DDHHKPLIDADWRSFRARLVAAEQAIRPQVQEPSVDPDAAVNYPPQSSLGDKWAHTIHEP
EKGCLLIATEKLDGVHIFERTVILLLSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTF
SDRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAV
GPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRRKV
W
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022178
(301 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2094817 - symbol:AT3G29240 "AT3G29240" species... 879 5.3e-88 1
TAIR|locus:2012628 - symbol:AT1G33780 species:3702 "Arabi... 446 4.0e-42 1
TAIR|locus:2092241 - symbol:AT3G19780 species:3702 "Arabi... 154 6.9e-08 1
UNIPROTKB|Q605E8 - symbol:MCA2336 "UPF0301 protein MCA233... 134 8.6e-08 1
UNIPROTKB|Q5LX84 - symbol:SPO0296 "UPF0301 protein SPO029... 126 1.5e-06 1
TIGR_CMR|SPO_0296 - symbol:SPO_0296 "conserved hypothetic... 126 1.5e-06 1
UNIPROTKB|Q60BQ2 - symbol:MCA0413 "UPF0301 protein MCA041... 119 1.3e-05 1
UNIPROTKB|P67757 - symbol:MT0043 "UPF0301 protein Rv0038/... 113 0.00015 1
UNIPROTKB|Q83A18 - symbol:CBU_2093 "UPF0301 protein CBU_2... 109 0.00039 1
TIGR_CMR|CBU_2093 - symbol:CBU_2093 "conserved hypothetic... 109 0.00039 1
>TAIR|locus:2094817 [details] [associations]
symbol:AT3G29240 "AT3G29240" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009543 "chloroplast
thylakoid lumen" evidence=ISS] [GO:0009507 "chloroplast"
evidence=IDA] GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AB026657 InterPro:IPR003774 Pfam:PF02622 HOGENOM:HOG000238547
EMBL:AY079021 EMBL:AY084920 EMBL:AY139756 EMBL:BT004545
IPI:IPI00538535 RefSeq:NP_566847.1 RefSeq:NP_850648.1
UniGene:At.21226 ProteinModelPortal:Q9LS71 SMR:Q9LS71 PaxDb:Q9LS71
PRIDE:Q9LS71 EnsemblPlants:AT3G29240.1 EnsemblPlants:AT3G29240.2
GeneID:822579 KEGG:ath:AT3G29240 TAIR:At3g29240 eggNOG:NOG327451
InParanoid:Q9LS71 OMA:GYCGWEK PhylomeDB:Q9LS71
ProtClustDB:CLSN2688902 Genevestigator:Q9LS71 Uniprot:Q9LS71
Length = 317
Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
Identities = 182/292 (62%), Positives = 211/292 (72%)
Query: 1 MEACCLTSNSFNKTTELVPVSKARVVSYTKRNHNLNHFHCKRVGFSSSITCCHLESSLPS 60
M+AC LTS S + ELVP KAR+ + KRN F ++V S+ C +S P
Sbjct: 1 MDACFLTSRSISGVKELVPFIKARIFTCPKRNSG--QFVTRKVASPISVNCSLSDSWKPL 58
Query: 61 DDH---HKPLI-----DADWRSFRARLVAAEQAIRPQVQEPS-VDPDAAVNYPPQSS--- 108
+D K + DADWR FRARLVA EQA + +PS +PD V+Y P SS
Sbjct: 59 EDDADLFKDCVNNSTSDADWREFRARLVAGEQAATSEKDQPSWSNPDMVVDYQPSSSSLI 118
Query: 109 -LGDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILLLSMEPMGPSGIILNRPSLMSIK 167
+G KWAH IHEPE GCLLIATEKLDGVHIFE+TVILLLS+ P GP G+ILNRPSLMSIK
Sbjct: 119 TIGSKWAHKIHEPETGCLLIATEKLDGVHIFEKTVILLLSVGPSGPIGVILNRPSLMSIK 178
Query: 168 EMRSTVLDAAGTFSDRPLFFGGPLEEGLFLVSPKGGGD-EVGKSGVFEQVMEGLYFGTKE 226
E +ST+LD AGTFSD+ LFFGGPLEEGLFLVSP+ GGD EVGKSGVF QVM+GLY+GT+E
Sbjct: 179 ETKSTILDMAGTFSDKRLFFGGPLEEGLFLVSPRSGGDNEVGKSGVFRQVMKGLYYGTRE 238
Query: 227 TVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+VG AAEMVKRN VG + RFFDG CGWEKEQL EI GYWTVAACS +V+
Sbjct: 239 SVGLAAEMVKRNLVGRSELRFFDGYCGWEKEQLKAEILGGYWTVAACSSTVV 290
>TAIR|locus:2012628 [details] [associations]
symbol:AT1G33780 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009543
"chloroplast thylakoid lumen" evidence=ISS] [GO:0019243
"methylglyoxal catabolic process to D-lactate" evidence=RCA]
EMBL:CP002684 GO:GO:0009507 eggNOG:COG1678 InterPro:IPR003774
Pfam:PF02622 EMBL:AY062812 EMBL:AY081586 IPI:IPI00530544
RefSeq:NP_174638.2 UniGene:At.15837 ProteinModelPortal:Q8W467
SMR:Q8W467 PaxDb:Q8W467 PRIDE:Q8W467 DNASU:840269
EnsemblPlants:AT1G33780.1 GeneID:840269 KEGG:ath:AT1G33780
TAIR:At1g33780 HOGENOM:HOG000238547 InParanoid:Q8W467 OMA:ASSENLW
PhylomeDB:Q8W467 ProtClustDB:CLSN2690437 ArrayExpress:Q8W467
Genevestigator:Q8W467 Uniprot:Q8W467
Length = 325
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 97/215 (45%), Positives = 132/215 (61%)
Query: 68 IDADWRSFRARLVAAEQAIRPQVQEPSVDPDAAVNYPPQSSLGDKWAHTIHEPEKGCLLI 127
++ DWR FRA L EQ + + + +P +G KWAH I PE GC+L+
Sbjct: 95 LNTDWREFRANLFMKEQEEKAEAEGHESEP-----------IGLKWAHPIPFPETGCVLV 143
Query: 128 ATEKLDGVHIFERTVILLL---SMEPM-GPSGIILNRPSLMSIKEMRSTVLDAAGTFSDR 183
ATEKLDG F RTV+LLL + P GP G+++NRP +IK M+ST + A TFS+
Sbjct: 144 ATEKLDGYRTFARTVVLLLRAGTRHPQEGPFGVVINRPLHKNIKHMKSTKTELATTFSEC 203
Query: 184 PLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPE 243
L+FGGPLE +FL+ GD+ G FE+VM GL FGT+ ++ AA +VK+ + P+
Sbjct: 204 SLYFGGPLEASMFLLKT---GDKTKIPG-FEEVMPGLNFGTRNSLDEAAVLVKKGVLKPQ 259
Query: 244 DFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+FRFF G GW+ +QL EEI + YW VAACS +I
Sbjct: 260 EFRFFVGYAGWQLDQLREEIESDYWHVAACSSDLI 294
>TAIR|locus:2092241 [details] [associations]
symbol:AT3G19780 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] EMBL:CP002686
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833
InterPro:IPR003774 Pfam:PF02622 IPI:IPI00527787 RefSeq:NP_566646.5
UniGene:At.50205 UniGene:At.66501 ProteinModelPortal:F4JCD3
SMR:F4JCD3 PRIDE:F4JCD3 EnsemblPlants:AT3G19780.1 GeneID:821515
KEGG:ath:AT3G19780 OMA:FHGLIIN Uniprot:F4JCD3
Length = 1059
Score = 154 (59.3 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 46/151 (30%), Positives = 74/151 (49%)
Query: 123 GCLLIATEKLDGVHIFERTVILLLSMEP-MGPSGIILN-RPSLMSIKEMRSTVLDAAGTF 180
G +L+ATEKL F ++ IL++ P +G G+I N R S ++ T A
Sbjct: 904 GTVLVATEKLAASLTFAKSKILIIKAGPEIGFLGLIFNKRIRWKSFPDLGET----AELL 959
Query: 181 SDRPLFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNA 239
+ PL FGGP+ + G+ L++ D + ++ G+YF ++V + +K
Sbjct: 960 KETPLSFGGPVVDPGIPLLALTRERDS-STNHDHPEISPGVYFLDHQSVARRIQELKSRE 1018
Query: 240 VGPEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270
+ P ++ FF G W EQL +EI G W V
Sbjct: 1019 LNPSEYWFFLGYSSWSYEQLFDEIGLGVWDV 1049
>UNIPROTKB|Q605E8 [details] [associations]
symbol:MCA2336 "UPF0301 protein MCA2336 2" species:243233
"Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE017282 GenomeReviews:AE017282_GR eggNOG:COG1678 KO:K07735
HAMAP:MF_00758 InterPro:IPR003774 Pfam:PF02622 HSSP:Q8EBZ9
HOGENOM:HOG000281193 OMA:VETGRGF RefSeq:YP_114752.1
ProteinModelPortal:Q605E8 GeneID:3102526 KEGG:mca:MCA2336
PATRIC:22608530 Uniprot:Q605E8
Length = 188
Score = 134 (52.2 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 53/157 (33%), Positives = 66/157 (42%)
Query: 126 LIATEKLDGVHIFERTVILLLSMEPMGPSGIILNRPSLMSIKE-MRSTVLDA-AGTFSDR 183
LIA L H F +TV L+ G GII+NRPS + + + MR +D D
Sbjct: 13 LIAMPGLTDPH-FAKTVTLVCQHNADGALGIIINRPSELKLSDIMRQMEIDLKVAELGDL 71
Query: 184 PLFFGGPL--EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVG 241
P+FFGGP+ E G L P V S + V E L T + E V R G
Sbjct: 72 PVFFGGPVHPERGFILHEPA----TVWASTLV--VSERLALTTSRDI---LEAVGRGE-G 121
Query: 242 PEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
P G GW + QL EI W A +VI
Sbjct: 122 PRRMLLALGYAGWGQGQLEREIIDNSWLNAPSDNAVI 158
>UNIPROTKB|Q5LX84 [details] [associations]
symbol:SPO0296 "UPF0301 protein SPO0296" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:CP000031
GenomeReviews:CP000031_GR eggNOG:COG1678 KO:K07735 HAMAP:MF_00758
InterPro:IPR003774 Pfam:PF02622 HSSP:Q8EBZ9 HOGENOM:HOG000281193
OMA:VETGRGF RefSeq:YP_165559.1 ProteinModelPortal:Q5LX84
GeneID:3195560 KEGG:sil:SPO0296 PATRIC:23373845 Uniprot:Q5LX84
Length = 184
Score = 126 (49.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 48/160 (30%), Positives = 73/160 (45%)
Query: 123 GCLLIATEKLDGVHIFERTVILLLSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAAGTFS 181
G LLIA + G FER+VI L S G G+I+N+P+ +++ + + + ++ +
Sbjct: 5 GKLLIAMPGM-GDPRFERSVIFLCSHGEDGAMGLIVNKPADLNVSTLLEQLEIPSSSAAA 63
Query: 182 DR-PLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
R P+ GGP+E G L SP D GK + V +G F T+ ++ + N
Sbjct: 64 ARAPVRLGGPVEMARGFVLHSP----DYAGKLQSLK-VSDG--FVMTATLDILEDIARDN 116
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GP G GW QL EI W A P ++
Sbjct: 117 --GPARAALMLGYSGWGPGQLEAEIGDNGWLTADADPDIV 154
>TIGR_CMR|SPO_0296 [details] [associations]
symbol:SPO_0296 "conserved hypothetical protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000031 GenomeReviews:CP000031_GR eggNOG:COG1678 KO:K07735
HAMAP:MF_00758 InterPro:IPR003774 Pfam:PF02622 HSSP:Q8EBZ9
HOGENOM:HOG000281193 OMA:VETGRGF RefSeq:YP_165559.1
ProteinModelPortal:Q5LX84 GeneID:3195560 KEGG:sil:SPO0296
PATRIC:23373845 Uniprot:Q5LX84
Length = 184
Score = 126 (49.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 48/160 (30%), Positives = 73/160 (45%)
Query: 123 GCLLIATEKLDGVHIFERTVILLLSMEPMGPSGIILNRPSLMSIKEMRSTV-LDAAGTFS 181
G LLIA + G FER+VI L S G G+I+N+P+ +++ + + + ++ +
Sbjct: 5 GKLLIAMPGM-GDPRFERSVIFLCSHGEDGAMGLIVNKPADLNVSTLLEQLEIPSSSAAA 63
Query: 182 DR-PLFFGGPLE--EGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRN 238
R P+ GGP+E G L SP D GK + V +G F T+ ++ + N
Sbjct: 64 ARAPVRLGGPVEMARGFVLHSP----DYAGKLQSLK-VSDG--FVMTATLDILEDIARDN 116
Query: 239 AVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
GP G GW QL EI W A P ++
Sbjct: 117 --GPARAALMLGYSGWGPGQLEAEIGDNGWLTADADPDIV 154
>UNIPROTKB|Q60BQ2 [details] [associations]
symbol:MCA0413 "UPF0301 protein MCA0413 1" species:243233
"Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE017282 GenomeReviews:AE017282_GR eggNOG:COG1678
HAMAP:MF_00758 InterPro:IPR003774 Pfam:PF02622 HOGENOM:HOG000281193
RefSeq:YP_112944.1 HSSP:Q6FF54 ProteinModelPortal:Q60BQ2
GeneID:3103494 KEGG:mca:MCA0413 PATRIC:22604575 OMA:GDKIFHN
Uniprot:Q60BQ2
Length = 182
Score = 119 (46.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 50/165 (30%), Positives = 70/165 (42%)
Query: 118 HEPEKGCLLIATEKLDGVHIFERTVILLLSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA 177
H G L+A K+ +IF +VI ++S G G+I+NR L + +L+A
Sbjct: 10 HADTSGQFLVAHPKMPA-NIFAHSVIYVVSHNADGAMGLIVNR--LAGAGPL-GKLLEAF 65
Query: 178 GTFS----DRPLFFGGPLEEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAE 233
G S + L+ GGP+ G V D G S + +GL T V E
Sbjct: 66 GLASKAQREIKLYLGGPVGIGQGFVLHSD--DYAGAST--RALKKGLSLSTGLDV---LE 118
Query: 234 MVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+ R GP R G GW QL+ EI G W +A S+I
Sbjct: 119 AIARGR-GPRQVRMLFGYAGWSPGQLDGEIARGDWLLAPADTSLI 162
>UNIPROTKB|P67757 [details] [associations]
symbol:MT0043 "UPF0301 protein Rv0038/MT0043" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] GO:GO:0005886 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842572 PIR:D70702
RefSeq:NP_214552.1 RefSeq:NP_334452.1 RefSeq:YP_006513352.1
ProteinModelPortal:P67757 SMR:P67757 PRIDE:P67757
EnsemblBacteria:EBMYCT00000001659 EnsemblBacteria:EBMYCT00000071342
GeneID:13316016 GeneID:887045 GeneID:922630 KEGG:mtc:MT0043
KEGG:mtu:Rv0038 KEGG:mtv:RVBD_0038 PATRIC:18121821
TubercuList:Rv0038 eggNOG:COG1678 HOGENOM:HOG000281194 KO:K07735
OMA:LRIFAGY ProtClustDB:PRK00228 HAMAP:MF_00758 InterPro:IPR003774
Pfam:PF02622 Uniprot:P67757
Length = 202
Score = 113 (44.8 bits), Expect = 0.00015, P = 0.00015
Identities = 48/175 (27%), Positives = 70/175 (40%)
Query: 105 PQSSLGDKWAHTIHEPEKGCLLIA-TEKLDGVHIFERTVILLLSMEPMGPSGIILNRPSL 163
P D A G LL+A T+ L+ F R+VI ++ G G++LNRPS
Sbjct: 4 PHEDPEDHVAPAAQRVRAGTLLLANTDLLEPT--FRRSVIYIVEHNDGGTLGVVLNRPSE 61
Query: 164 MSIKEMRSTVLDAAGTFSDRPLFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLY 221
++ + A + +F GGP++ L L + G D G G+ V L
Sbjct: 62 TAVYNVLPQWAKLAA--KPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGL-RHVAGRLV 118
Query: 222 FGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPS 276
+ E++ A E R + G GW QL EI W V + PS
Sbjct: 119 M---VDLDADPEVL---AAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPS 167
>UNIPROTKB|Q83A18 [details] [associations]
symbol:CBU_2093 "UPF0301 protein CBU_2093" species:227377
"Coxiella burnetii RSA 493" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE016828
GenomeReviews:AE016828_GR eggNOG:COG1678 KO:K07735 HAMAP:MF_00758
InterPro:IPR003774 Pfam:PF02622 HOGENOM:HOG000281193
RefSeq:NP_821063.2 ProteinModelPortal:Q83A18 PRIDE:Q83A18
GeneID:1210006 KEGG:cbu:CBU_2093 PATRIC:17932935 OMA:VETGRGF
ProtClustDB:CLSK915240 BioCyc:CBUR227377:GJ7S-2059-MONOMER
Uniprot:Q83A18
Length = 194
Score = 109 (43.4 bits), Expect = 0.00039, P = 0.00039
Identities = 41/156 (26%), Positives = 72/156 (46%)
Query: 126 LIATEKLDGVHIFERTVILLLSMEPMGPSGIILNRPSLMSI-KEMRSTVLDAAGT-FSDR 183
L+A +L+ F + VI + + G GII+NRP +++ K + ++ A ++
Sbjct: 25 LVAMPQLNDF-TFTKAVIYVSQHDAKGALGIIINRPLALTLGKVLEHLNIEIAQPQIANH 83
Query: 184 PLFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
P+ GGP+ +E F+V ++ G E L +K+ + + + +N GP
Sbjct: 84 PVLMGGPIGQEHGFIVY-----EQESPQGA-----EILLSASKDML----DDIAKNK-GP 128
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+DF G GWE QL EI W V + ++
Sbjct: 129 DDFLITLGYAGWEAGQLENEIARNDWLVVPFNRKIL 164
>TIGR_CMR|CBU_2093 [details] [associations]
symbol:CBU_2093 "conserved hypothetical protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
EMBL:AE016828 GenomeReviews:AE016828_GR eggNOG:COG1678 KO:K07735
HAMAP:MF_00758 InterPro:IPR003774 Pfam:PF02622 HOGENOM:HOG000281193
RefSeq:NP_821063.2 ProteinModelPortal:Q83A18 PRIDE:Q83A18
GeneID:1210006 KEGG:cbu:CBU_2093 PATRIC:17932935 OMA:VETGRGF
ProtClustDB:CLSK915240 BioCyc:CBUR227377:GJ7S-2059-MONOMER
Uniprot:Q83A18
Length = 194
Score = 109 (43.4 bits), Expect = 0.00039, P = 0.00039
Identities = 41/156 (26%), Positives = 72/156 (46%)
Query: 126 LIATEKLDGVHIFERTVILLLSMEPMGPSGIILNRPSLMSI-KEMRSTVLDAAGT-FSDR 183
L+A +L+ F + VI + + G GII+NRP +++ K + ++ A ++
Sbjct: 25 LVAMPQLNDF-TFTKAVIYVSQHDAKGALGIIINRPLALTLGKVLEHLNIEIAQPQIANH 83
Query: 184 PLFFGGPL-EEGLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGP 242
P+ GGP+ +E F+V ++ G E L +K+ + + + +N GP
Sbjct: 84 PVLMGGPIGQEHGFIVY-----EQESPQGA-----EILLSASKDML----DDIAKNK-GP 128
Query: 243 EDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPSVI 278
+DF G GWE QL EI W V + ++
Sbjct: 129 DDFLITLGYAGWEAGQLENEIARNDWLVVPFNRKIL 164
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 301 285 0.00085 115 3 11 22 0.37 34
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 617 (66 KB)
Total size of DFA: 224 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.20u 0.09s 22.29t Elapsed: 00:00:01
Total cpu time: 22.20u 0.09s 22.29t Elapsed: 00:00:01
Start: Sat May 11 09:08:29 2013 End: Sat May 11 09:08:30 2013