Query 022178
Match_columns 301
No_of_seqs 148 out of 873
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 15:12:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022178.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022178hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ew0_A Hypothetical protein ac 100.0 2.4E-49 8.2E-54 352.7 14.4 169 117-298 2-173 (192)
2 2gzo_A UPF0301 protein SO3346; 100.0 2.7E-49 9.3E-54 353.0 13.3 167 119-298 2-176 (195)
3 2haf_A Putative translation re 100.0 3.5E-49 1.2E-53 356.1 11.2 174 110-298 9-191 (211)
4 2do8_A UPF0301 protein HD_1794 100.0 8.6E-49 2.9E-53 348.0 8.9 166 120-298 4-177 (188)
5 2gs5_A Conserved hypothetical 100.0 1.7E-48 5.7E-53 348.7 9.7 174 110-298 3-184 (198)
6 1jli_A Interleukin 3, multi-CS 28.8 42 0.0014 26.9 3.2 13 69-81 88-100 (112)
7 2l3o_A Interleukin 3; cytokine 23.5 51 0.0018 26.9 2.8 19 63-81 86-104 (127)
8 3edo_A Flavoprotein, putative 8.8 4.6E+02 0.016 20.4 5.0 24 242-265 106-129 (151)
9 1i8x_A Granulin-1; two beta-ha 8.4 1.5E+02 0.005 18.3 1.3 11 45-55 10-20 (30)
10 3gxh_A Putative phosphatase (D 7.8 7.1E+02 0.024 19.5 5.7 56 213-274 15-76 (157)
No 1
>2ew0_A Hypothetical protein aciad0353; Q5FF54, ASR1, NESG, structural genomics, PSI, protein struct initiative; 1.40A {Acinetobacter SP} SCOP: d.310.1.1
Probab=100.00 E-value=2.4e-49 Score=352.66 Aligned_cols=169 Identities=25% Similarity=0.397 Sum_probs=144.8
Q ss_pred cCCCCCCcEEEecCCCCCCCCcCceEEEEEEeCCCCcEEEEecCCCCccHHHHHHhhhcccC-CCCCCCeEecCCccC--
Q 022178 117 IHEPEKGCLLIATEKLDGVHIFERTVILLLSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG-TFSDRPLFFGGPLEE-- 193 (301)
Q Consensus 117 ~~~pe~G~LLIAtP~L~d~~~F~RSVILLleH~e~Ga~GLILNRP~~~~l~~l~~~~~dl~~-~~~~~pvy~GGPV~~-- 193 (301)
+.++++|+||||+|.|.|+ +|+|||||||+|+++||||||||||++++++++++++ ++.. .+.+.|||+||||++
T Consensus 2 t~~~l~G~lLIA~P~l~d~-~F~rSVIli~eH~~~Ga~GlIlNrP~~~~l~~ll~~l-~~~~~~~~~~~v~~GGPV~~~r 79 (192)
T 2ew0_A 2 TKQYLTHRCLIAPPEMADD-FFANTVIYLARHDEEGAQGIIINRPAGIQIKELLNDL-DIDADNVNPHEVLQGGPLRPEA 79 (192)
T ss_dssp ---CCTTEEEECCTTCCCT-TTTTCEEEEEEEETTEEEEEECSCEEEEEHHHHHHHT-TCCCTTCCCCEEEECCSEEEEE
T ss_pred CcccCCCeEEEeCCCCCCC-CccceEEEEEEeCCCceeEEEecCCCCCCHHHHHHhh-CcccccCCCCeeEECCCcCCCc
Confidence 3567999999999999975 9999999999999999999999999999999998876 3321 233789999999996
Q ss_pred CeEEEccCCCCCccCCCcceeeeecceeeccchhhhhhHHHHHhccCCCCceEEEeeccCCChhHHHHHHHcCCeEEccC
Q 022178 194 GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAAC 273 (301)
Q Consensus 194 ~~~L~~~~~~~~~~~~~~~~~eV~~Gly~g~~~~v~~a~elv~~g~~~~~dfrfF~GYsGW~pGQLE~EI~~G~W~va~a 273 (301)
+|+||...... ..+.+|.+|||++++.++ .+.+.+| .+|++||||+|||||++||||+||++|+|++++|
T Consensus 80 gfvLH~~~~~~------~~s~~v~~gv~lt~s~d~---l~~i~~~-~~p~~~~~flGYaGW~~GQLe~Ei~~n~Wl~~~a 149 (192)
T 2ew0_A 80 GFVLHTGQPTW------HSSIAVGENVCITTSKDI---LDAIAHN-EGVGRYQIALGYASWGKNQLEDEIARGDWLICDA 149 (192)
T ss_dssp EEEEEESCCCS------SSEEEEETTEEEECSSHH---HHHHHTT-CSCCSEEEEEEEEEECTTHHHHHHHTTCCEEEEC
T ss_pred EEEEEeCCCCC------CCceEecCCeeeeCCHHH---HHHHhcC-CCCccEEEEEeecCCCHHHHHHHHHcCCEEEecC
Confidence 67888753211 125899999999998875 4556666 5789999999999999999999999999999999
Q ss_pred CCCeeecCCCchhHHHHHHHhcCCC
Q 022178 274 SPSVIGLESGTLGLWEELLWLMGRR 298 (301)
Q Consensus 274 s~~li~f~~~~~~lW~e~L~~~Gg~ 298 (301)
++++| |+.+++++|+++|++||++
T Consensus 150 ~~~~l-f~~~~~~~W~~al~~lG~~ 173 (192)
T 2ew0_A 150 DMDLI-FNLPYDDRWDAAYKKIGVD 173 (192)
T ss_dssp CHHHH-TTSCGGGHHHHHHHHGGGS
T ss_pred CHHHh-hCCCHHHHHHHHHHHhCCC
Confidence 99999 9999999999999999987
No 2
>2gzo_A UPF0301 protein SO3346; GFT-protein structure, nesgc, alpha-beta, structural genomics, PSI, protein structure initiative; NMR {Shewanella oneidensis} SCOP: d.310.1.1
Probab=100.00 E-value=2.7e-49 Score=353.03 Aligned_cols=167 Identities=23% Similarity=0.447 Sum_probs=145.6
Q ss_pred CCCCCcEEEecCCCCCCCCcCceEEEEEEeCCCCcEEEEecCCCCccHHHHHHhhhccc----CC--CCCCCeEecCCcc
Q 022178 119 EPEKGCLLIATEKLDGVHIFERTVILLLSMEPMGPSGIILNRPSLMSIKEMRSTVLDAA----GT--FSDRPLFFGGPLE 192 (301)
Q Consensus 119 ~pe~G~LLIAtP~L~d~~~F~RSVILLleH~e~Ga~GLILNRP~~~~l~~l~~~~~dl~----~~--~~~~pvy~GGPV~ 192 (301)
.+++|+||||+|.|.|+ +|+|||||||+|+++||||||||||++++++++++++ ++. .. +.+.|||+||||+
T Consensus 2 ~~l~G~lLIA~P~l~d~-~F~rSVVli~eH~~~Ga~GlIiNrP~~~~l~~ll~~l-~~~~~~~~~~~~~~~~v~~GGPV~ 79 (195)
T 2gzo_A 2 ESLQNHFLIAMPSLDDT-FFERTVIYLCEHDEKGAMGLVINKPLGIEVNSLLEQM-DLPTEQVSADLAMGSQVLMGGPVS 79 (195)
T ss_dssp CCCSSEEEEECTTSCSC-SSSSEEEEECCCBTTBCCEEECSSCCCBCHHHHHHHH-TSCSSCCCCCCCCCSCBEESCSBT
T ss_pred CCCCCeEEEeCCCCCCC-CccccEEEEEEeCCCceeEEEecCCCCCcHHHHHHhh-CcccccccccccCCCeEEECCCcC
Confidence 58999999999999975 9999999999999999999999999999999998876 321 11 4678999999999
Q ss_pred C--CeEEEccCCCCCccCCCcceeeeecceeeccchhhhhhHHHHHhccCCCCceEEEeeccCCChhHHHHHHHcCCeEE
Q 022178 193 E--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTV 270 (301)
Q Consensus 193 ~--~~~L~~~~~~~~~~~~~~~~~eV~~Gly~g~~~~v~~a~elv~~g~~~~~dfrfF~GYsGW~pGQLE~EI~~G~W~v 270 (301)
+ +|+||...... ..+.+|.+|||++++.++ .+.+.+| .+|++||||+|||||++||||+||++|+|++
T Consensus 80 ~~rgfvLH~~~~~~------~~s~~v~~gv~lt~s~di---l~~i~~~-~~p~~~~~flGYaGW~~GQLE~Ei~~n~Wl~ 149 (195)
T 2gzo_A 80 QDRGFVLHTSQPYW------ANSTELGSGLMLTTSRDV---LTAIGSK-RSPDKFLVALGYAGWSKNQLEQELADNSWLT 149 (195)
T ss_dssp TTSCCEEEECCSCS------SSCCCSSSSEEEECTTHH---HHHHTSC-CCSSCEECEECBCTHHHHCCHHHHHHHTCEE
T ss_pred CCcEEEEEeCCCCC------CCceEecCCeeeeCCHHH---HHHHhcC-CCCccEEEEEeecCCCHHHHHHHHHcCCEEE
Confidence 6 68888753211 125789999999998875 4556666 5789999999999999999999999999999
Q ss_pred ccCCCCeeecCCCchhHHHHHHHhcCCC
Q 022178 271 AACSPSVIGLESGTLGLWEELLWLMGRR 298 (301)
Q Consensus 271 a~as~~li~f~~~~~~lW~e~L~~~Gg~ 298 (301)
++|++++| |+.+++++|+++|++||++
T Consensus 150 ~~a~~~~l-f~~~~~~~W~~al~~lG~~ 176 (195)
T 2gzo_A 150 IPADHALL-FDINHEDRWQQASRSLGFE 176 (195)
T ss_dssp EECCHHHH-TTSCSSHHHHHHHHCCCCC
T ss_pred ecCCHHHh-cCCCHHHHHHHHHHHhCCC
Confidence 99999999 9999999999999999987
No 3
>2haf_A Putative translation repressor; alpha/beta, X-RAY crystallography, structural genomics, PSI, protein structure initiative; 2.88A {Vibrio cholerae} SCOP: d.310.1.1 PDB: 2aj2_A
Probab=100.00 E-value=3.5e-49 Score=356.11 Aligned_cols=174 Identities=21% Similarity=0.423 Sum_probs=149.3
Q ss_pred CCCcccccCCCCCCcEEEecCCCCCCCCcCceEEEEEEeCCCCcEEEEecCCCCccHHHHHHhhhcccC---C----CCC
Q 022178 110 GDKWAHTIHEPEKGCLLIATEKLDGVHIFERTVILLLSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAG---T----FSD 182 (301)
Q Consensus 110 ~~~WAh~~~~pe~G~LLIAtP~L~d~~~F~RSVILLleH~e~Ga~GLILNRP~~~~l~~l~~~~~dl~~---~----~~~ 182 (301)
.-.|.|.+ +++|+||||+|.|.|+ +|+|||||||+|+++||||||||||++++++++++++ ++.. + +.+
T Consensus 9 ~~~~~hs~--~l~G~lLIA~P~L~D~-~F~rSVVliceH~~~GamGlIiNrP~~~~l~~ll~~l-~~~~~~~~~~~~~~~ 84 (211)
T 2haf_A 9 DIEVGHSM--NLTNHFLVAMPSMKDP-YFKRSVIYICEHNQDGAMGLMINAPIDITVGGMLKQV-DIEPAYPQSHQENLK 84 (211)
T ss_dssp CCCCCCCC--CCTTEEEEECSSCCSG-GGTTCEEEEEEEETTEEEEEESSCEEEEEHHHHHHHT-TCCCSSCCCCCSGGG
T ss_pred CCCCcCCC--CCCCeEEEeCCCCCCC-CcCccEEEEEEeCCCCeeEEEecCCCCCcHHHHHHhh-ccccccccccccccC
Confidence 44589998 4999999999999975 9999999999999999999999999999999998876 3311 1 357
Q ss_pred CCeEecCCccC--CeEEEccCCCCCccCCCcceeeeecceeeccchhhhhhHHHHHhccCCCCceEEEeeccCCChhHHH
Q 022178 183 RPLFFGGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLN 260 (301)
Q Consensus 183 ~pvy~GGPV~~--~~~L~~~~~~~~~~~~~~~~~eV~~Gly~g~~~~v~~a~elv~~g~~~~~dfrfF~GYsGW~pGQLE 260 (301)
.|||+||||++ +|+||...... ..+.+|.+|||++++.++ .+.+.++ .++++||||+|||||++||||
T Consensus 85 ~~v~~GGPV~~~rgfvLH~~~~~~------~~s~~v~~gv~lt~s~di---l~~i~~~-~~p~~~~~flGYaGW~~GQLE 154 (211)
T 2haf_A 85 KPVFNGGPVSEDRGFILHRPRDHY------ESSMKMTDDIAVTTSKDI---LTVLGTE-AEPEGYIVALGYSGWSAGQLE 154 (211)
T ss_dssp SEEEECCSEEEEEEEEEECCCSCC------SSEEECSSSCEEECSGGG---GGGTTST-TSCSSEEEEEEEEEEETTHHH
T ss_pred CeEEECCCccCCcEEEEEecCCCC------CCceEecCCeeecCCHHH---HHHHhcC-CCCccEEEEeeecCCCHHHHH
Confidence 79999999996 67887753211 125899999999998875 3445555 578999999999999999999
Q ss_pred HHHHcCCeEEccCCCCeeecCCCchhHHHHHHHhcCCC
Q 022178 261 EEIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRR 298 (301)
Q Consensus 261 ~EI~~G~W~va~as~~li~f~~~~~~lW~e~L~~~Gg~ 298 (301)
+||++|+|++++|++++| |+.+++++|+++|++||++
T Consensus 155 ~Ei~~n~Wl~~~a~~~~l-F~~~~~~~W~~al~~lG~d 191 (211)
T 2haf_A 155 VELTENSWLTIEADPELI-FNTPVHEKWQKAIQKLGIS 191 (211)
T ss_dssp HHHHTTSEEEEECCHHHH-HSSCGGGHHHHHHHHTSCC
T ss_pred HHHHcCCEEEecCCHHHh-cCCCHHHHHHHHHHHhCCC
Confidence 999999999999999999 9999999999999999987
No 4
>2do8_A UPF0301 protein HD_1794; NESG, GFT structral genomics, HDR14, structural genomics, PSI, protein structure initiative; NMR {Haemophilus ducreyi} SCOP: d.310.1.1
Probab=100.00 E-value=8.6e-49 Score=347.97 Aligned_cols=166 Identities=27% Similarity=0.474 Sum_probs=143.6
Q ss_pred CCCCcEEEecCCCCCCCCcCceEEEEEEeCCCCcEEEEecCCCCccHHHHHHhhhcccCC-----CCCCCeEecCCccC-
Q 022178 120 PEKGCLLIATEKLDGVHIFERTVILLLSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGT-----FSDRPLFFGGPLEE- 193 (301)
Q Consensus 120 pe~G~LLIAtP~L~d~~~F~RSVILLleH~e~Ga~GLILNRP~~~~l~~l~~~~~dl~~~-----~~~~pvy~GGPV~~- 193 (301)
.++|+||||+|.|.|+ +|+|||||||+|+++||||||||||++++++++++++ ++... +.+.|||+||||++
T Consensus 4 ~l~G~lLIA~P~l~d~-~F~rSVVli~eH~~~Ga~GlIlNrp~~~~l~~ll~~~-~~~~~~~~~~~~~~~v~~GGPV~~~ 81 (188)
T 2do8_A 4 NLQGKFIIATPEMDDE-YFDRTVIYICEHNDNGTIGVIINTPTDLSVLELLTRM-DFQMAKPRIYTQDQMVLNGGPVNQD 81 (188)
T ss_dssp CCTTEEEECCCSCTTC-CSSCCCCEEEEEETTEEEEECSCCEEEEEHHHHHHHT-TCCCCCCGGGCCCCEEEECCSEEEE
T ss_pred CCCCeEEEeCCCCCCC-CcCccEEEEEEeCCCCceEEEEeCCCCCCHHHHHHhh-cccccccccccCCCeEEECCCccCC
Confidence 4899999999999975 9999999999999999999999999999999998876 32111 35789999999996
Q ss_pred -CeEEEcc-CCCCCccCCCcceeeeecceeeccchhhhhhHHHHHhccCCCCceEEEeeccCCChhHHHHHHHcCCeEEc
Q 022178 194 -GLFLVSP-KGGGDEVGKSGVFEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVA 271 (301)
Q Consensus 194 -~~~L~~~-~~~~~~~~~~~~~~eV~~Gly~g~~~~v~~a~elv~~g~~~~~dfrfF~GYsGW~pGQLE~EI~~G~W~va 271 (301)
+|+||.. .... ..+.+|.+|||++++.++ .+.+.++ .+|++||||+|||||++||||+||++|+|+++
T Consensus 82 rgfvLH~~~~~~~------~~s~~v~~gv~lt~s~di---l~~i~~~-~~p~~~~~~lGYaGW~~GQLe~Ei~~n~Wl~~ 151 (188)
T 2do8_A 82 RGFIVHSKTDHEF------THSYKVTDDITLTTSGDV---LDSFGTQ-TAPEKFIVCLGCSTWKPHQLEQEIAQNYWLLS 151 (188)
T ss_dssp EEEEEECCCTTCC------SSEEESSSSCEEECSSHH---HHHTTST-TCCSCEEEEEEEEEECTTHHHHHHHTTSSEEE
T ss_pred cEEEEEeCCCCCC------CCcEEecCCeeecCCHHH---HHHHhcC-CCCccEEEEEeecCCCHHHHHHHHHcCCEEEe
Confidence 6778773 2211 125799999999998874 4556565 57899999999999999999999999999999
Q ss_pred cCCCCeeecCCCchhHHHHHHHhcCCC
Q 022178 272 ACSPSVIGLESGTLGLWEELLWLMGRR 298 (301)
Q Consensus 272 ~as~~li~f~~~~~~lW~e~L~~~Gg~ 298 (301)
+|++++| |+.+++++|+++|++||++
T Consensus 152 ~a~~~~l-f~~~~~~~W~~al~~lG~~ 177 (188)
T 2do8_A 152 EANNQTL-FETSYLDRWVEANEMLGIS 177 (188)
T ss_dssp ECCTHHH-HTTTSSCCSSHHHHTTTSC
T ss_pred cCCHHHh-hCCCHHHHHHHHHHHcCCC
Confidence 9999999 9999999999999999986
No 5
>2gs5_A Conserved hypothetical protein; corvnebacterium diphtheria, structural genomics, PSI; 1.50A {Corynebacterium diphtheriae nctc 13129ORGANISM_TAXID} SCOP: d.310.1.1 PDB: 2hrx_A
Probab=100.00 E-value=1.7e-48 Score=348.68 Aligned_cols=174 Identities=22% Similarity=0.395 Sum_probs=146.6
Q ss_pred CCCccccc--CCCCCCcEEEecCCCCCCCCcCceEEEEEEeCCCCcEEEEecCCCCccHHHHHHhhhcccCCCCCCCeEe
Q 022178 110 GDKWAHTI--HEPEKGCLLIATEKLDGVHIFERTVILLLSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFSDRPLFF 187 (301)
Q Consensus 110 ~~~WAh~~--~~pe~G~LLIAtP~L~d~~~F~RSVILLleH~e~Ga~GLILNRP~~~~l~~l~~~~~dl~~~~~~~pvy~ 187 (301)
.++|+|.. ..+++|+||||+|.|.|+ +|+|||||||+|+++||||||||||++++++++++++... .+.+.|||+
T Consensus 3 ~~~~~~~~~~~~~l~G~lLIA~P~L~d~-~F~rSVVli~eH~~~Ga~GlIlNrp~~~~l~~ll~~~~~~--~~~~~~v~~ 79 (198)
T 2gs5_A 3 ADRLFNAMERNEPAPGMVLVAAPSMESE-DFARSVILIIEHSEYATFGVNLASRSDVAVFNVIPEWVPC--VTKPQALYI 79 (198)
T ss_dssp CGGGGSSSCCCCCCTTEEEEECTTCCCT-TTTTCEEEEEEECSSCEEEEESSCEEEEEGGGTCGGGGGG--CCSSCEEEE
T ss_pred cchhcccccccCCCCCeEEEeCCCCCCC-CccccEEEEEEeCCCCeeEEEecCCCCCCHHHHHHhhccc--ccCCCeEEE
Confidence 46899996 568999999999999975 9999999999999999999999999999999998876322 236789999
Q ss_pred cCCccC--CeEEEccCCCCCccCCCcceeeeecc----eeeccchhhhhhHHHHHhccCCCCceEEEeeccCCChhHHHH
Q 022178 188 GGPLEE--GLFLVSPKGGGDEVGKSGVFEQVMEG----LYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNE 261 (301)
Q Consensus 188 GGPV~~--~~~L~~~~~~~~~~~~~~~~~eV~~G----ly~g~~~~v~~a~elv~~g~~~~~dfrfF~GYsGW~pGQLE~ 261 (301)
||||++ +|+||......+.... .+.+|.+| ||++++.++ ++.+ .+++|||+|||||++||||+
T Consensus 80 GGPV~~~~gfvLH~~~~~~~~~~~--~s~~v~~g~~~~v~l~~s~d~---l~~~------~~~~~~flGYaGW~~GQLe~ 148 (198)
T 2gs5_A 80 GGPLNQQSVVGVGVTAQGVDAARV--DNLTRLANRLVMVNLGADPEE---IKPL------VSGMRLFAGHAEWAPGQLAQ 148 (198)
T ss_dssp CCSEEEEEEEEEEEECTTCCGGGC--TTEEEEETTEEEECTTSCHHH---HGGG------EEEEEEEEEEEEECTTHHHH
T ss_pred CCCccCCeEEEEEecCccccccCC--CceEecCCCceeEEEcCCHHH---HHHH------hhccEEEeeEcCCChHHHHH
Confidence 999996 6788876422110001 24799999 999997663 2222 17899999999999999999
Q ss_pred HHHcCCeEEccCCCCeeecCCCchhHHHHHHHhcCCC
Q 022178 262 EIRAGYWTVAACSPSVIGLESGTLGLWEELLWLMGRR 298 (301)
Q Consensus 262 EI~~G~W~va~as~~li~f~~~~~~lW~e~L~~~Gg~ 298 (301)
||++|+|++++|++++| |+.+++++|+++|++||++
T Consensus 149 Ei~~n~Wl~~~a~~~~l-f~~~~~~~W~~al~~lG~~ 184 (198)
T 2gs5_A 149 EIENGDWFVAPALPSDV-TAPGSVDVWGDVMRRQPMP 184 (198)
T ss_dssp HHHTTSEEEEECCHHHH-HCCTTCCHHHHHHHTSSTT
T ss_pred HHHcCCEEEecCCHHHh-cCCCHHHHHHHHHHHcCCC
Confidence 99999999999999999 9999999999999999987
No 6
>1jli_A Interleukin 3, multi-CSF; hematopoietic growth factor, colony-stimulating factor, cytokine; NMR {Homo sapiens} SCOP: a.26.1.2
Probab=28.82 E-value=42 Score=26.91 Aligned_cols=13 Identities=46% Similarity=1.027 Sum_probs=11.1
Q ss_pred CchhHHHHHHHHH
Q 022178 69 DADWRSFRARLVA 81 (301)
Q Consensus 69 ~~dWR~FRA~Lv~ 81 (301)
++||-+||.||-.
T Consensus 88 ~~dl~DFr~KL~f 100 (112)
T 1jli_A 88 DGDWNEFRRKLTF 100 (112)
T ss_dssp SSCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHH
Confidence 4899999999854
No 7
>2l3o_A Interleukin 3; cytokine; NMR {Mus musculus}
Probab=23.52 E-value=51 Score=26.87 Aligned_cols=19 Identities=21% Similarity=0.202 Sum_probs=14.7
Q ss_pred CCCCCCCchhHHHHHHHHH
Q 022178 63 HHKPLIDADWRSFRARLVA 81 (301)
Q Consensus 63 ~~~~~~~~dWR~FRA~Lv~ 81 (301)
-..|-..+||-+||+||..
T Consensus 86 ~~~pI~I~dl~DFrkKL~f 104 (127)
T 2l3o_A 86 ALPGVFIRDLDDFRKKLRF 104 (127)
T ss_dssp CCCCCCCSCHHHHHHHHHH
T ss_pred cCCCeeeCcHHHHHHHHHH
Confidence 3455555999999999966
No 8
>3edo_A Flavoprotein, putative Trp repressor binding protein; YP_193882.1, flavoprotein in complex with FMN, structural genomics; HET: MSE FMN; 1.20A {Lactobacillus acidophilus ncfm}
Probab=8.84 E-value=4.6e+02 Score=20.41 Aligned_cols=24 Identities=8% Similarity=0.072 Sum_probs=16.9
Q ss_pred CCceEEEeeccCCChhHHHHHHHc
Q 022178 242 PEDFRFFDGCCGWEKEQLNEEIRA 265 (301)
Q Consensus 242 ~~dfrfF~GYsGW~pGQLE~EI~~ 265 (301)
....-.|.++.||+.|.=..+|++
T Consensus 106 ~~k~~~~~t~gg~~~g~~~~~l~~ 129 (151)
T 3edo_A 106 RGEVASFFTSAGTNHKAYVSHFNE 129 (151)
T ss_dssp CSEEEEEEECSSCCHHHHHHHHHH
T ss_pred CCEEEEEEEeCCCCCCcHHHHHHH
Confidence 346778889999997655555544
No 9
>1i8x_A Granulin-1; two beta-hairpin stack, cytokine; NMR {Synthetic} SCOP: g.3.16.1 PDB: 1qgm_A 1i8y_A
Probab=8.44 E-value=1.5e+02 Score=18.31 Aligned_cols=11 Identities=18% Similarity=0.289 Sum_probs=8.7
Q ss_pred CccceeeeecC
Q 022178 45 FSSSITCCHLE 55 (301)
Q Consensus 45 ~~~~~~~~~~~ 55 (301)
=|.+-|||.+.
T Consensus 10 CP~~~TCC~~~ 20 (30)
T 1i8x_A 10 CPDGTTCSLSP 20 (30)
T ss_dssp CCTTEEEEECT
T ss_pred CCCCCeeeccC
Confidence 47889999864
No 10
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=7.78 E-value=7.1e+02 Score=19.51 Aligned_cols=56 Identities=7% Similarity=-0.021 Sum_probs=31.4
Q ss_pred eeeeecceeeccchhhhhhHHHHHhccCCCCceEEEeeccC-CChh---HHHHHHHc-C-CeEEccCC
Q 022178 213 FEQVMEGLYFGTKETVGCAAEMVKRNAVGPEDFRFFDGCCG-WEKE---QLNEEIRA-G-YWTVAACS 274 (301)
Q Consensus 213 ~~eV~~Gly~g~~~~v~~a~elv~~g~~~~~dfrfF~GYsG-W~pG---QLE~EI~~-G-~W~va~as 274 (301)
+.+|.++||.++....+.+..+.+.| +++.+-|.. -... .+.+++++ | .++..+++
T Consensus 15 ~~~V~~~l~~s~~p~~a~a~~La~~G------a~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~D 76 (157)
T 3gxh_A 15 LQQQAPQLLSSGLPNEQQFSLLKQAG------VDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVD 76 (157)
T ss_dssp CEEEETTEEEEBCCCHHHHHHHHHTT------CCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCC
T ss_pred hheecCceeEcCCCCHHHHHHHHHcC------CCEEEECCCcccccccccHHHHHHHcCCeEEEecCC
Confidence 67899999999864433344455444 455544432 1111 24566654 4 46666664
Done!