Citrus Sinensis ID: 022180

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-
MKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPLTPGPGTPSNPLPANQEQSSPGGHAVGPAVAGRAPSKPSTASTQLISSRSSSLKVLPFLLLLRLLVSAS
ccccccccccccccEEEEcccccccHHHHHHHcccccccEEEEccccccEEEEEccccccccEEEEEEEcccccccEEEEEEEEEEccEEEcccccEEEEEcccccccccHHHHHHHHHHHHHHHcccccccccccccccEEccccccccccEEEEEEccccEEEEccccEEEEEcccccEEEEEEEcccccEEEEccccEEcEEEEEEccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcc
cccccccccccccccEEccccccccHHHHHHHccccccEEEEEEccccccEEEEcccccccccEcccccccccccEEEEEEEEEEEccEEEcccccEEEEEcccEEEcccHHHHHHHHHHHHHHHHHccccccccccccEEEccccccccccEEEEEEccccEEEcccccEEEEEccccEEEEEEEEcccccEEEEEEEEEcccEEEEEccccEEEEcccccHHcHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcc
mkqsggyldgvapdgliglglgeisvPSLLAKAGlirnsfsmcfdkddsgriffgdqgpatqqSTSFLASNGKYITYIIGVETccigssclkqtSFKAIvdsgssftflpkEVYETIAAEFDRQvndtitsfegypwkccyksssqrlpklpsvklmfpqnnsfvvnnpVFVIYGTQVVTGFClaiqpvdgdigtigqnfmtgyrvvfdrenlklgwshsncqdlndgtkspltpgpgtpsnplpanqeqsspgghavgpavagrapskpstastqlissrssslkvlPFLLLLRLLVSAS
mkqsggyldgVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPLTPGPGTPSNPLPANQEQSSPGGHAVGPAVAGRAPSKPSTastqlissrssslkvlpfLLLLRLLVSAS
MKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMfpqnnsfvvnnpvfvIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPLTPGPGTPSNPLPANQEQSSpgghavgpavagrapSKPstastqlissrssslkvlpfllllrllvsas
******YLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQG*****STSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSN***************************************************************LKVLPFLLLLRLLV***
****GGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVND*****EGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNC*********************************************************SRSSSLKVLPFLLLLRLLVSAS
MKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPLTPGPGTPS****************************************SSSLKVLPFLLLLRLLVSAS
****GGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLN****************************************************SSRSSSLKVLPFLLLLRLLVSAS
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MKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPLTPGPGTPSNPLPANQEQSSPGGHAVGPAVAGRAPSKPSTASTQLISSRSSSLKVLPFLLLLRLLVSAS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query301 2.2.26 [Sep-21-2011]
Q9LX20528 Aspartic proteinase-like yes no 0.857 0.488 0.593 3e-88
P32329569 Aspartic proteinase 3 OS= yes no 0.631 0.333 0.273 1e-07
Q9S9K4475 Aspartic proteinase-like no no 0.674 0.427 0.25 4e-06
Q9Y5Z0518 Beta-secretase 2 OS=Homo yes no 0.800 0.465 0.230 0.0001
Q9JL18514 Beta-secretase 2 OS=Mus m yes no 0.724 0.424 0.222 0.0002
Q6IE75514 Beta-secretase 2 OS=Rattu yes no 0.757 0.443 0.225 0.0002
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function desciption
 Score =  325 bits (832), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 158/266 (59%), Positives = 201/266 (75%), Gaps = 8/266 (3%)

Query: 2   KQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPAT 61
           KQSG YLDGVAPDGL+GLG  EISVPS L+KAGL+RNSFS+CFD++DSGRI+FGD GP+ 
Sbjct: 233 KQSGDYLDGVAPDGLMGLGPAEISVPSFLSKAGLMRNSFSLCFDEEDSGRIYFGDMGPSI 292

Query: 62  QQSTSFLA-SNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAE 120
           QQST FL   N KY  YI+GVE CCIG+SCLKQTSF   +DSG SFT+LP+E+Y  +A E
Sbjct: 293 QQSTPFLQLDNNKYSGYIVGVEACCIGNSCLKQTSFTTFIDSGQSFTYLPEEIYRKVALE 352

Query: 121 FDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVT 180
            DR +N T  +FEG  W+ CY+SS++  PK+P++KL F  NN+FV++ P+FV   +Q + 
Sbjct: 353 IDRHINATSKNFEGVSWEYCYESSAE--PKVPAIKLKFSHNNTFVIHKPLFVFQQSQGLV 410

Query: 181 GFCLAIQPVDGD-IGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSP-LTPGPG 238
            FCL I P   + IG+IGQN+M GYR+VFDREN+KLGWS S CQ+  D  + P  +PG  
Sbjct: 411 QFCLPISPSGQEGIGSIGQNYMRGYRMVFDRENMKLGWSPSKCQE--DKIEPPQASPGST 468

Query: 239 TPSNPLPANQEQSSPGGHAVGPAVAG 264
           +  NPLP +++QS  GGHAV PA+AG
Sbjct: 469 SSPNPLPTDEQQSR-GGHAVSPAIAG 493

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|P32329|YPS1_YEAST Aspartic proteinase 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPS1 PE=1 SV=2 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q9Y5Z0|BACE2_HUMAN Beta-secretase 2 OS=Homo sapiens GN=BACE2 PE=1 SV=1 Back     alignment and function description
>sp|Q9JL18|BACE2_MOUSE Beta-secretase 2 OS=Mus musculus GN=Bace2 PE=2 SV=1 Back     alignment and function description
>sp|Q6IE75|BACE2_RAT Beta-secretase 2 OS=Rattus norvegicus GN=Bace2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query301
255576176 542 Aspartic proteinase nepenthesin-1 precur 0.933 0.518 0.758 1e-125
296082464 530 unnamed protein product [Vitis vinifera] 0.933 0.530 0.730 1e-119
225438629 511 PREDICTED: aspartic proteinase-like prot 0.933 0.549 0.730 1e-119
224083757 492 predicted protein [Populus trichocarpa] 0.887 0.542 0.753 1e-116
449451627 532 PREDICTED: aspartic proteinase-like prot 0.970 0.548 0.680 1e-114
356567798 520 PREDICTED: aspartic proteinase-like prot 0.923 0.534 0.696 1e-108
356538031 521 PREDICTED: aspartic proteinase-like prot 0.923 0.533 0.696 1e-107
357463449 529 Aspartic proteinase-like protein [Medica 0.913 0.519 0.684 5e-99
302141912 521 unnamed protein product [Vitis vinifera] 0.906 0.523 0.607 3e-91
359492825 531 PREDICTED: aspartic proteinase-like prot 0.906 0.514 0.607 4e-91
>gi|255576176|ref|XP_002528982.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] gi|223531572|gb|EEF33401.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 213/281 (75%), Positives = 241/281 (85%)

Query: 1   MKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPA 60
           MKQSGGYLDGVAPDGL+GLGL EISVPS LAKAGLIRNSFSMCFD+DDSGRIFFGDQGP 
Sbjct: 241 MKQSGGYLDGVAPDGLMGLGLAEISVPSFLAKAGLIRNSFSMCFDEDDSGRIFFGDQGPT 300

Query: 61  TQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAE 120
           TQQST FL  +G Y TY++GVE  C+GSSCLKQTSF+A+VD+G+SFTFLP  VYE I  E
Sbjct: 301 TQQSTPFLTLDGNYTTYVVGVEGFCVGSSCLKQTSFRALVDTGTSFTFLPNGVYERITEE 360

Query: 121 FDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVT 180
           FDRQVN TI+SF GYPWK CYKSSS  L K+PSVKL+FP NNSFV++NPVF+IYG Q +T
Sbjct: 361 FDRQVNATISSFNGYPWKYCYKSSSNHLTKVPSVKLIFPLNNSFVIHNPVFMIYGIQGIT 420

Query: 181 GFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPLTPGPGTP 240
           GFCLAIQP +GDIGTIGQNFM GYRVVFDREN+KLGWSHS+C+D ++  + PLT   GT 
Sbjct: 421 GFCLAIQPTEGDIGTIGQNFMAGYRVVFDRENMKLGWSHSSCEDRSNDKRMPLTSPNGTL 480

Query: 241 SNPLPANQEQSSPGGHAVGPAVAGRAPSKPSTASTQLISSR 281
            NPLP N++QSSPGGHAV PAVAGRAPSKPS A+ QL+ SR
Sbjct: 481 VNPLPTNEQQSSPGGHAVSPAVAGRAPSKPSAAAVQLLPSR 521

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296082464|emb|CBI21469.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225438629|ref|XP_002281243.1| PREDICTED: aspartic proteinase-like protein 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224083757|ref|XP_002307112.1| predicted protein [Populus trichocarpa] gi|222856561|gb|EEE94108.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449451627|ref|XP_004143563.1| PREDICTED: aspartic proteinase-like protein 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356567798|ref|XP_003552102.1| PREDICTED: aspartic proteinase-like protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|356538031|ref|XP_003537508.1| PREDICTED: aspartic proteinase-like protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|357463449|ref|XP_003602006.1| Aspartic proteinase-like protein [Medicago truncatula] gi|355491054|gb|AES72257.1| Aspartic proteinase-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|302141912|emb|CBI19115.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359492825|ref|XP_002284255.2| PREDICTED: aspartic proteinase-like protein 1-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query301
TAIR|locus:2184138528 AT5G10080 [Arabidopsis thalian 0.817 0.465 0.557 4.1e-72
TAIR|locus:2125324524 AT4G35880 [Arabidopsis thalian 0.734 0.421 0.400 2.1e-36
TAIR|locus:2827921513 AT2G17760 [Arabidopsis thalian 0.717 0.421 0.421 1.2e-35
TAIR|locus:2080903529 AT3G51330 [Arabidopsis thalian 0.800 0.455 0.362 2.8e-31
TAIR|locus:2080973488 AT3G51360 [Arabidopsis thalian 0.794 0.489 0.34 4.3e-28
TAIR|locus:2080913528 AT3G51350 [Arabidopsis thalian 0.800 0.456 0.332 1.2e-26
TAIR|locus:2080908530 AT3G51340 [Arabidopsis thalian 0.800 0.454 0.337 2.6e-26
TAIR|locus:2083098 632 AT3G50050 [Arabidopsis thalian 0.790 0.376 0.273 1.8e-14
TAIR|locus:2017799484 AT1G79720 [Arabidopsis thalian 0.684 0.425 0.265 1.1e-10
TAIR|locus:2031225483 AT1G25510 [Arabidopsis thalian 0.684 0.426 0.266 1.5e-09
TAIR|locus:2184138 AT5G10080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
 Identities = 141/253 (55%), Positives = 179/253 (70%)

Query:     2 KQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPAT 61
             KQSG YLDGVAPDGL+GLG  EISVPS L+KAGL+RNSFS+CFD++DSGRI+FGD GP+ 
Sbjct:   233 KQSGDYLDGVAPDGLMGLGPAEISVPSFLSKAGLMRNSFSLCFDEEDSGRIYFGDMGPSI 292

Query:    62 QQSTSFLA-SNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAE 120
             QQST FL   N KY  YI+GVE CCIG+SCLKQTSF   +DSG SFT+LP+E+Y  +A E
Sbjct:   293 QQSTPFLQLDNNKYSGYIVGVEACCIGNSCLKQTSFTTFIDSGQSFTYLPEEIYRKVALE 352

Query:   121 FDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMXXXXXXXXXXXXXXXIYGTQVVT 180
              DR +N T  +FEG  W+ CY+SS++  PK+P++KL                   +Q + 
Sbjct:   353 IDRHINATSKNFEGVSWEYCYESSAE--PKVPAIKLKFSHNNTFVIHKPLFVFQQSQGLV 410

Query:   181 GFCLAIQPVDGD-IGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSP-LTPGPG 238
              FCL I P   + IG+IGQN+M GYR+VFDREN+KLGWS S CQ+  D  + P  +PG  
Sbjct:   411 QFCLPISPSGQEGIGSIGQNYMRGYRMVFDRENMKLGWSPSKCQE--DKIEPPQASPGST 468

Query:   239 TPSNPLPANQEQS 251
             +  NPLP +++QS
Sbjct:   469 SSPNPLPTDEQQS 481
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0031225 "anchored to membrane" evidence=TAS
GO:0046658 "anchored to plasma membrane" evidence=IDA
TAIR|locus:2125324 AT4G35880 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2827921 AT2G17760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080903 AT3G51330 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080973 AT3G51360 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080913 AT3G51350 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080908 AT3G51340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083098 AT3G50050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2017799 AT1G79720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031225 AT1G25510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.23LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query301
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 2e-17
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 1e-14
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 1e-13
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 3e-13
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 3e-10
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 1e-09
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 7e-09
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 8e-05
cd05473364 cd05473, beta_secretase_like, Beta-secretase, aspa 2e-04
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 2e-04
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information 
 Score = 79.6 bits (197), Expect = 2e-17
 Identities = 55/238 (23%), Positives = 79/238 (33%), Gaps = 62/238 (26%)

Query: 3   QSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCF----DKDDSGRIFFGD-- 56
             GG   G   DG++GLG G +S+ S L   G   N FS C     D   S  +  GD  
Sbjct: 72  NEGGSFGG--ADGILGLGRGPLSLVSQLGSTG---NKFSYCLVPHDDTGGSSPLILGDAA 126

Query: 57  -QGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKA----------IVDSGSS 105
             G +    T  + +      Y + +E   +G   L                 I+DSG++
Sbjct: 127 DLGGSGVVYTPLVKNPANPTYYYVNLEGISVGGKRLPIPPSVFAIDSDGSGGTIIDSGTT 186

Query: 106 FTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFV 165
            T+LP   Y  +   FD                                 L  P  N FV
Sbjct: 187 LTYLPDPAYPDLTLHFD-----------------------------GGADLELPPENYFV 217

Query: 166 VNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNF-MTGYRVVFDRENLKLGWSHSNC 222
                            CLAI        +I  N     + V +D EN +LG++ ++C
Sbjct: 218 DVGE----------GVVCLAILSSSSGGVSILGNIQQQNFLVEYDLENSRLGFAPADC 265

This family contains pepsin like aspartic proteases from plants including Chloroplast Nucleoids DNA-binding Protease and Nucellin. Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco and Nucellins are important regulators of nucellar cell's progressive degradation after ovule fertilization. Structurally, aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. The N- and C-terminal domains, although structurally related by a 2-fold axis, have only limited sequence homology except the vicinity of the active site. This suggests that the enzymes evolved by an ancient duplication event. The enzymes specifically cleave bonds in peptides which have at least six residues in length with hydrophobic residues in both the P1 and P1' positions. The active site is located at the groove formed by the two lobes, with an extended loop projecting over the cleft to form an 11-residue flap, which encloses substrates and inhibitors in the active site. Specificity is determined by nearest-neighbor hydrophobic residues surrounding the catalytic aspartates, and by three residues in the flap. The enzymes are mostly secreted from cells as inactive proenzymes that activate autocatalytically at acidic pH. Length = 265
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133140 cd05473, beta_secretase_like, Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 301
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
PLN03146431 aspartyl protease family protein; Provisional 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 99.98
KOG1339398 consensus Aspartyl protease [Posttranslational mod 99.98
PTZ00147453 plasmepsin-1; Provisional 99.97
PTZ00013450 plasmepsin 4 (PM4); Provisional 99.97
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 99.97
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 99.96
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 99.95
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.94
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 98.12
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 96.41
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 96.37
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 94.78
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 93.43
PF1365090 Asp_protease_2: Aspartyl protease 88.28
PF12384177 Peptidase_A2B: Ty3 transposon peptidase; InterPro: 86.65
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 86.07
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 85.76
PF09668124 Asp_protease: Aspartyl protease; InterPro: IPR0191 85.41
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 83.97
KOG0012380 consensus DNA damage inducible protein [Replicatio 80.03
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information 
Probab=100.00  E-value=2e-37  Score=283.78  Aligned_cols=208  Identities=25%  Similarity=0.416  Sum_probs=171.4

Q ss_pred             CCceEeecCCCCCCHHHHHHhcCCCCCcEEEeecCC---CCceEEECCCCCC--CCeEEeeeecCCCceeEEEEEeEEEE
Q 022180           12 APDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKD---DSGRIFFGDQGPA--TQQSTSFLASNGKYITYIIGVETCCI   86 (301)
Q Consensus        12 ~~dGIlGLg~~~~S~~~~L~~~g~i~~~FSl~l~~~---~~G~i~fGg~d~~--~~~~~p~v~~~~~~~~y~V~l~~i~v   86 (301)
                      .+|||||||+..+|++.||..+  .+++||+||.+.   ..|+|+|||+|+.  .+.++|++..+....+|.|+|++|.|
T Consensus        80 ~~~GilGLg~~~~s~~~ql~~~--~~~~FS~~L~~~~~~~~G~l~fGg~d~~~g~l~~~pv~~~~~~~~~y~v~l~~i~v  157 (299)
T cd05472          80 GAAGLLGLGRGKLSLPSQTASS--YGGVFSYCLPDRSSSSSGYLSFGAAASVPAGASFTPMLSNPRVPTFYYVGLTGISV  157 (299)
T ss_pred             CCCEEEECCCCcchHHHHhhHh--hcCceEEEccCCCCCCCceEEeCCccccCCCceECCCccCCCCCCeEEEeeEEEEE
Confidence            5799999999999999998764  468999999873   4799999999985  46699987665445789999999999


Q ss_pred             cCeEeec-----CcceEEEccCCcceecCHHHHHHHHHHHHHhcccccccCCCCCceecccccCCCCCCCCeEEEEeCCC
Q 022180           87 GSSCLKQ-----TSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQN  161 (301)
Q Consensus        87 ~~~~~~~-----~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~g~  161 (301)
                      |++.+..     ....++|||||++++||+++|++|.+++.++............+..||..++.....+|+|+|+|.++
T Consensus       158 g~~~~~~~~~~~~~~~~ivDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~~g  237 (299)
T cd05472         158 GGRRLPIPPASFGAGGVIIDSGTVITRLPPSAYAALRDAFRAAMAAYPRAPGFSILDTCYDLSGFRSVSVPTVSLHFQGG  237 (299)
T ss_pred             CCEECCCCccccCCCCeEEeCCCcceecCHHHHHHHHHHHHHHhccCCCCCCCCCCCccCcCCCCcCCccCCEEEEECCC
Confidence            9998763     24579999999999999999999999998765432211112234469988776677899999999768


Q ss_pred             ceeeecCCEEEEEeecccceEEEEEEecC--CCceEEcceeeecEEEEEeCCCCeEEEEeCCC
Q 022180          162 NSFVVNNPVFVIYGTQVVTGFCLAIQPVD--GDIGTIGQNFMTGYRVVFDRENLKLGWSHSNC  222 (301)
Q Consensus       162 ~~~~i~~~~y~~~~~~~~~~~Cl~i~~~~--~~~~ILG~~fl~~~yvvFD~en~riGfa~~~c  222 (301)
                      ..+.|++++|++.... .+.+|+++...+  .+.+|||+.|||++|+|||++++|||||+.+|
T Consensus       238 ~~~~l~~~~y~~~~~~-~~~~C~~~~~~~~~~~~~ilG~~fl~~~~vvfD~~~~~igfa~~~C  299 (299)
T cd05472         238 ADVELDASGVLYPVDD-SSQVCLAFAGTSDDGGLSIIGNVQQQTFRVVYDVAGGRIGFAPGGC  299 (299)
T ss_pred             CEEEeCcccEEEEecC-CCCEEEEEeCCCCCCCCEEEchHHccceEEEEECCCCEEeEecCCC
Confidence            9999999999984322 357899988763  46799999999999999999999999999999

Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco. Antisense tobacco with reduced amount of CND41 maintained green leaves and constant protein levels, especially Rubisco. CND41 has DNA-binding as well as aspartic protease activities. The pepsin-like aspartic protease domain is located at the C-terminus of the protein. The enzyme is characterized by having two aspartic protease catalytic site motifs, the Asp-Thr-Gly-Ser in the N-terminal and Asp-Ser-Gly-Ser in the C-terminal region. Aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe may be evolved from the other through ancient gene-duplication event. This fami
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>PF12384 Peptidase_A2B: Ty3 transposon peptidase; InterPro: IPR024650 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>PF09668 Asp_protease: Aspartyl protease; InterPro: IPR019103 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>KOG0012 consensus DNA damage inducible protein [Replication, recombination and repair] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query301
2ewy_A383 Crystal Structure Of Human Bace2 In Complex With A 1e-04
>pdb|2EWY|A Chain A, Crystal Structure Of Human Bace2 In Complex With A Hydroxyethylenamine Transition-State Inhibitor Length = 383 Back     alignment and structure 
Iteration: 1

 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 107/280 (38%), Gaps = 46/280 (16%)
Query: 7   YLDGVAPDGLIGLGLGEISVPS---------LLAKAGLIRNSFSMCF---------DKDD 48
           +L G+  +G++GL    ++ PS         L+ +A  I N FSM              +
Sbjct: 110 FLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQAN-IPNVFSMQMCGAGLPVAGSGTN 168
Query: 49  SGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSS-----CLKQTSFKAIVDSG 103
            G +  G   P+  +   +     +   Y I +    IG       C +  + KAIVDSG
Sbjct: 169 GGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSG 228
Query: 104 SSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWK----CCYKSSSQRLPKLP--SVKLM 157
           ++   LP++V++ +     R     I  F    W      C+ +S       P  S+ L 
Sbjct: 229 TTLLRLPQKVFDAVVEAVARA--SLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLR 286
Query: 158 XXXXXXXXXXXXXXXIYGTQVVTG-------FCLAIQPVDGDIGTIGQNFMTGYRVVFDR 210
                          +Y  Q + G       +   I P    +  IG   M G+ V+FDR
Sbjct: 287 DENSSRSFRITILPQLY-IQPMMGAGLNYECYRFGISPSTNAL-VIGATVMEGFYVIFDR 344
Query: 211 ENLKLGWSHSNCQDLNDGTKSPLTPGP----GTPSNPLPA 246
              ++G++ S C ++     S ++ GP       SN +PA
Sbjct: 345 AQKRVGFAASPCAEIAGAAVSEIS-GPFSTEDVASNCVPA 383

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query301
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 1e-33
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 8e-30
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 5e-27
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 5e-17
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 2e-16
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 5e-16
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 7e-15
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 1e-12
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 3e-12
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 6e-12
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 1e-11
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 1e-11
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 2e-11
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 4e-11
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 4e-11
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 5e-11
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 9e-11
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 2e-10
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 4e-10
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 6e-10
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 1e-09
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 2e-09
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 2e-09
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 2e-09
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 2e-09
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 3e-09
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 3e-09
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 4e-09
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 3e-08
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 4e-08
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 3e-07
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 6e-06
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 4e-04
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 1e-04
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  126 bits (316), Expect = 1e-33
 Identities = 48/245 (19%), Positives = 85/245 (34%), Gaps = 27/245 (11%)

Query: 3   QSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDS--GRIFFGDQGPA 60
                       G+ GLG   IS+P+ LA    ++  F+ C  +  +  G I FGD    
Sbjct: 145 FLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGDAPNN 204

Query: 61  TQQSTSFLASNGKYIT---------YIIGVETCCIG-----------SSCLKQTSFKAIV 100
            +Q  +    +    T         Y + V +  I            S+ +  TS   ++
Sbjct: 205 MRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMI 264

Query: 101 DSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQ 160
            + +    L + VY+     F +Q+          P+  C+ S+   +   PSV L+  +
Sbjct: 265 STSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNK--INAYPSVDLVMDK 322

Query: 161 NNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGT---IGQNFMTGYRVVFDRENLKLGW 217
            N  V       +         CL +            +G   +    VVFD    ++G+
Sbjct: 323 PNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGF 382

Query: 218 SHSNC 222
           S S+ 
Sbjct: 383 STSSL 387
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Length = 241 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query301
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 99.78
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.71
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 96.12
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 94.97
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=8.7e-39  Score=303.92  Aligned_cols=214  Identities=21%  Similarity=0.385  Sum_probs=176.2

Q ss_pred             CCCceEeecCCCCCCHHHHHHhcCCCCCcEEEeecCC--CCceEEECCCCCC---------C-CeEEeeeecCCC-----
Q 022180           11 VAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKD--DSGRIFFGDQGPA---------T-QQSTSFLASNGK-----   73 (301)
Q Consensus        11 ~~~dGIlGLg~~~~S~~~~L~~~g~i~~~FSl~l~~~--~~G~i~fGg~d~~---------~-~~~~p~v~~~~~-----   73 (301)
                      ..+|||||||++.+|++.||.++++++++||+||.++  ..|.|+||+.|..         . +.++|++..+..     
T Consensus       149 ~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~  228 (413)
T 3vla_A          149 SGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATS  228 (413)
T ss_dssp             TTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSC
T ss_pred             cccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccc
Confidence            4579999999999999999999988899999999883  4799999999852         3 779999876422     


Q ss_pred             -----ceeEEEEEeEEEEcCeEeecC----------cceEEEccCCcceecCHHHHHHHHHHHHHhccccc--ccCCCCC
Q 022180           74 -----YITYIIGVETCCIGSSCLKQT----------SFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTI--TSFEGYP  136 (301)
Q Consensus        74 -----~~~y~V~l~~i~v~~~~~~~~----------~~~aiiDSGTs~~~lP~~~~~~l~~~i~~~~~~~~--~~~~~~~  136 (301)
                           ..+|.|+|++|.||++.+...          ..++||||||++++||+++|++|+++|.+++...+  .......
T Consensus       229 ~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~  308 (413)
T 3vla_A          229 TQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAP  308 (413)
T ss_dssp             CTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTT
T ss_pred             cccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCC
Confidence                 268999999999999988632          36799999999999999999999999988764211  1112245


Q ss_pred             ceecccccCCC----CCCCCeEEEEeCC-CceeeecCCEEEEEeecccceEEEEEEecCC---CceEEcceeeecEEEEE
Q 022180          137 WKCCYKSSSQR----LPKLPSVKLMFPQ-NNSFVVNNPVFVIYGTQVVTGFCLAIQPVDG---DIGTIGQNFMTGYRVVF  208 (301)
Q Consensus       137 ~~~C~~~~~~~----~~~~P~i~~~f~g-~~~~~i~~~~y~~~~~~~~~~~Cl~i~~~~~---~~~ILG~~fl~~~yvvF  208 (301)
                      +..||..++..    +..+|+|+|+|+| ++.|+|++++|+++..+  +.+|++++..+.   +.||||+.|||++|+||
T Consensus       309 ~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvf  386 (413)
T 3vla_A          309 FGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQF  386 (413)
T ss_dssp             CSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEECEEEEESSCSSSEEECHHHHTTEEEEE
T ss_pred             CcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEEEEEecCCCcccceeEehhhhcCeEEEE
Confidence            78999887532    3579999999965 48999999999997654  678999987652   68999999999999999


Q ss_pred             eCCCCeEEEEeC------CCCCCC
Q 022180          209 DRENLKLGWSHS------NCQDLN  226 (301)
Q Consensus       209 D~en~riGfa~~------~c~~~~  226 (301)
                      |++|+|||||++      .|.+.+
T Consensus       387 D~~~~riGfa~~~~~~~~~c~~~~  410 (413)
T 3vla_A          387 DLATSRVGFSGTLLGSRTTCANFN  410 (413)
T ss_dssp             ETTTTEEEEEEEGGGGTCCGGGSB
T ss_pred             ECCCCEEEEEEecccCcccccCcC
Confidence            999999999986      566543
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 301
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 3e-22
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 2e-17
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 2e-16
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 1e-15
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 2e-15
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 2e-15
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 1e-14
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 2e-14
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 2e-14
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 5e-14
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 6e-14
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 7e-14
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 7e-14
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 6e-13
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 6e-13
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 8e-13
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 8e-13
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 2e-12
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 1e-11
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 3e-11
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 1e-10
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 4e-10
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score = 93.2 bits (230), Expect = 3e-22
 Identities = 38/255 (14%), Positives = 80/255 (31%), Gaps = 32/255 (12%)

Query: 3   QSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQ 62
                       G+ GL    +++P+ +A A  + N F +C      G   FG       
Sbjct: 127 SKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWP 186

Query: 63  QSTSFLA-----SNGKYITYIIGVETCCIGSSCLK-----QTSFKAIVDSGSSFTFLPKE 112
           Q T  +      + G    + I   +  +G + +        +   ++ +   +  L  +
Sbjct: 187 QFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLSTRLPYVLLRPD 246

Query: 113 VYETIAAEFDRQVNDTITSFEGYPWKC--------CYKSS----SQRLPKLPSVKLMFPQ 160
           VY  +   F + +     +                CY +     +     +P+V+L    
Sbjct: 247 VYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLDG 306

Query: 161 NNSFVVNNPVFVIYGTQVVTGFC------LAIQPVDGDIGTIGQNFMTGYRVVFDRENLK 214
            + + +     ++   Q            +A          +G   M  + + FD E  +
Sbjct: 307 GSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKR 366

Query: 215 LGWS----HSNCQDL 225
           LG+S     + C  L
Sbjct: 367 LGFSRLPHFTGCGGL 381
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1oewa_ b.50.1.2 (A:) Endothiapepsin {Chestnut blight fungus (Endothia parasitica) [TaxId: 5116]} Length = 330 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query301
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 99.97
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 99.97
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 99.97
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 99.97
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 99.97
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 99.97
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 99.97
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 99.97
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 99.97
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 99.97
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 99.96
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 99.96
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 99.96
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 99.96
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 99.95
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 99.95
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 99.95
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 99.94
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Acid protease
species: Bread mold (Rhizopus chinensis) [TaxId: 4843]

Probab=100.00  E-value=1.3e-33  Score=257.19  Aligned_cols=193  Identities=22%  Similarity=0.343  Sum_probs=158.6

Q ss_pred             CCCCceEeecCCCCC-------CHHHHHHhcCCC-CCcEEEeecCC---CCceEEECCCCCCCCe----EEeeeecCCCc
Q 022180           10 GVAPDGLIGLGLGEI-------SVPSLLAKAGLI-RNSFSMCFDKD---DSGRIFFGDQGPATQQ----STSFLASNGKY   74 (301)
Q Consensus        10 ~~~~dGIlGLg~~~~-------S~~~~L~~~g~i-~~~FSl~l~~~---~~G~i~fGg~d~~~~~----~~p~v~~~~~~   74 (301)
                      ....+||+|||+..+       +++.+|.++|+| +++||+||++.   ..|.|+|||+|..++.    ++|+.   ...
T Consensus       116 ~~~~~GilGlg~~~~~~~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~g~l~~Gg~d~~~~~~~~~~~~~~---~~~  192 (325)
T d2apra_         116 SGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPID---NSR  192 (325)
T ss_dssp             TSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECB---CTT
T ss_pred             ccccCcccccccccccccccCCcchhHHHhhccccceeEEEEeccCCCCCCeEEEecCCCchhhccceeeEeec---CCC
Confidence            345799999997643       478899999999 78999999763   3689999999998653    56653   234


Q ss_pred             eeEEEEEeEEEEcCeEeecCcceEEEccCCcceecCHHHHHHHHHHHHHhcccccccCCCCCceecccccCCCCCCCCeE
Q 022180           75 ITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSV  154 (301)
Q Consensus        75 ~~y~V~l~~i~v~~~~~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i  154 (301)
                      .+|.|.+++|.++++.+. ....++|||||++++||.+++++|.+.+.....     ..     .||.++|. ...+|+|
T Consensus       193 ~~~~v~l~~i~i~~~~~~-~~~~~iiDSGt~~~~lp~~~~~~l~~~~~~~~~-----~~-----~~~~~~C~-~~~~p~i  260 (325)
T d2apra_         193 GWWGITVDRATVGTSTVA-SSFDGILDTGTTLLILPNNIAASVARAYGASDN-----GD-----GTYTISCD-TSAFKPL  260 (325)
T ss_dssp             SSCEEEECEEEETTEEEE-CCEEEEECTTCSSEEEEHHHHHHHHHHHTCEEC-----SS-----SCEEECSC-GGGCCCE
T ss_pred             ceEEEEEeeEEECCEeec-ceeeeeccCCCccccCCHHHHHHHHHHhCCccc-----CC-----Cceeeccc-CCCCCcE
Confidence            689999999999999887 678899999999999999999999988753211     11     23444443 2368999


Q ss_pred             EEEeCCCceeeecCCEEEEEeecccceEEEEEEecCCCceEEcceeeecEEEEEeCCCCeEEEEeC
Q 022180          155 KLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHS  220 (301)
Q Consensus       155 ~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl~i~~~~~~~~ILG~~fl~~~yvvFD~en~riGfa~~  220 (301)
                      +|+| ++.+++|++++|+++..+  +.||++|+..+.+.+|||++|||++|+|||+|++||||||+
T Consensus       261 ~f~f-~g~~~~i~~~~y~~~~~~--~~C~~~i~~~~~~~~iLG~~flr~~y~vfD~~~~~IGfAp~  323 (325)
T d2apra_         261 VFSI-NGASFQVSPDSLVFEEFQ--GQCIAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPV  323 (325)
T ss_dssp             EEEE-TTEEEEECGGGGEEEEET--TEEEESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred             EEEE-CCEEEEEChHHeEEecCC--CEEEEEEccCCCCCEEECHHHhCcEEEEEECCCCEEeEEEc
Confidence            9999 789999999999987764  56778999888888999999999999999999999999996
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1oewa_ b.50.1.2 (A:) Endothiapepsin {Chestnut blight fungus (Endothia parasitica) [TaxId: 5116]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure