Query 022181
Match_columns 301
No_of_seqs 141 out of 389
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 15:16:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022181.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022181hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fau_A Vacuolar protein sortin 100.0 8.3E-89 2.9E-93 642.9 39.9 297 1-300 3-302 (341)
2 2r51_A Vacuolar protein sortin 100.0 1.7E-85 5.8E-90 620.6 41.2 290 9-299 11-301 (340)
3 1g4m_A Beta-arrestin1; sensory 99.9 1.1E-20 3.7E-25 182.0 27.6 266 9-300 13-357 (393)
4 1suj_A CONE arrestin; sensory 99.8 2.5E-17 8.6E-22 157.8 33.9 266 9-300 12-354 (392)
5 3ugu_A S-arrestin; arrestin fo 99.6 1.8E-11 6.2E-16 115.8 35.3 247 45-300 48-371 (380)
6 2r51_A Vacuolar protein sortin 97.4 0.0041 1.4E-07 58.4 15.9 108 41-155 186-300 (340)
7 1g4m_A Beta-arrestin1; sensory 97.4 0.0045 1.5E-07 59.3 16.3 109 41-154 207-354 (393)
8 2fau_A Vacuolar protein sortin 97.4 0.0081 2.8E-07 56.4 17.5 110 41-155 186-300 (341)
9 1suj_A CONE arrestin; sensory 97.3 0.0099 3.4E-07 56.8 16.4 108 41-155 204-352 (392)
10 3hrz_A Cobra venom factor; ser 94.4 3.4 0.00012 41.5 19.8 113 12-154 82-197 (627)
11 3ugu_A S-arrestin; arrestin fo 93.5 3.5 0.00012 38.9 16.6 110 41-155 223-369 (380)
12 2p9r_A Alpha-2-M, alpha-2-macr 92.1 2.4 8.3E-05 31.7 11.2 90 39-154 10-99 (102)
13 2hr0_A Complement C3 beta chai 90.7 14 0.00048 36.7 23.3 118 13-154 85-205 (645)
14 4fxk_A Complement C4 beta chai 85.7 11 0.00036 37.3 13.5 126 38-199 127-265 (656)
15 3prx_B Cobra venom factor; imm 84.9 12 0.0004 41.9 14.5 148 12-199 104-265 (1642)
16 3cu7_A Complement C5; Mg domai 84.8 20 0.00069 39.9 16.4 116 13-154 103-222 (1676)
17 2pn5_A TEP1R, thioester-contai 74.6 1E+02 0.0034 33.4 28.0 91 38-154 107-198 (1325)
18 2b39_A C3; thioester, immune d 67.4 24 0.00083 39.3 10.7 118 13-154 106-226 (1661)
19 4acq_A Alpha-2-macroglobulin; 53.0 2.6E+02 0.009 30.7 18.1 141 23-199 93-245 (1451)
20 2djm_A Glucoamylase A; beta sa 51.1 65 0.0022 24.6 7.6 29 21-58 3-31 (106)
21 1vjj_A Protein-glutamine gluta 40.8 2.5E+02 0.0085 28.5 11.9 101 44-154 494-594 (692)
22 1nep_A EPV20, BNPC2, epididyma 37.1 99 0.0034 24.0 6.9 48 238-294 80-128 (130)
23 2le2_A P56; UDG inhibition, DN 28.8 34 0.0012 22.5 2.2 27 265-291 3-29 (56)
24 3hqx_A UPF0345 protein aciad03 25.9 1.6E+02 0.0054 22.7 6.0 30 15-46 19-48 (111)
25 2q3z_A Transglutaminase 2; tra 25.3 3.2E+02 0.011 27.6 9.7 102 44-154 485-587 (687)
26 2ftc_K 39S ribosomal protein L 22.6 98 0.0033 23.4 4.1 35 39-73 1-35 (98)
27 3njn_A Peptidase; structural g 22.2 39 0.0013 26.4 1.8 34 9-57 11-46 (119)
28 2y72_A Collagenase, collagenas 21.9 1.6E+02 0.0053 20.8 5.1 25 270-294 59-83 (85)
29 1ex0_A Coagulation factor XIII 20.8 6.7E+02 0.023 25.5 13.6 122 44-174 529-656 (731)
No 1
>2fau_A Vacuolar protein sorting 26; arrestin, retromer, protein transport; HET: CAF; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.3e-89 Score=642.89 Aligned_cols=297 Identities=57% Similarity=0.955 Sum_probs=279.2
Q ss_pred CCcccC-CCCCceEEEEEecCCCCceeEEeecCCCceEEeeeecCCCcEEEEEEEEeC-CCcEEEEeEEEEEEEEEEEEE
Q 022181 1 MNYLIG-AFKPACNISITFADGKNRKQVPLKKENGQTIMVPLFQSQENISGKISIEPV-LGKKVEHNGVKIELLGQIEMY 78 (301)
Q Consensus 1 ~~~~~~-~~~~~~~i~i~l~~~~~~~~~~~~~~~~~~~~~~iY~~Ge~VsG~V~i~~~-~~k~~~h~gI~i~~~G~~e~~ 78 (301)
||| || |||++|+|+|.||++++|++++++.++|+++++|+|++||+|+|+|+|+++ +||+++|+||+|++.|+++++
T Consensus 3 ~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~vY~~GE~VsG~V~I~~~~~gk~l~h~GIki~~~G~~e~~ 81 (341)
T 2fau_A 3 MSF-LGGFFGPIXEIDIVLNDGETRKMAEMKTEDGKVEKHYLFYDGESVSGKVNLAFKQPGKRLEHQGIRIEFVGQIELF 81 (341)
T ss_dssp ------CTTTTTEEEEEEETTGGGSCEEEEECTTSCEEEEEEECTTCCEEEEEEEEESSSSCCEEESCEEEEEEEEEEEC
T ss_pred cch-hhhhcCCCceEEEEECCCCccceEEeecCCCceeccCcCCCCCEEEEEEEEEECCCCCeeeEEEEEEEEEEEEEEE
Confidence 555 46 468999999999999999999999999999999999999999999999997 689999999999999999999
Q ss_pred EcCCCeEEEEEeEEEecCCcccCCCce-EEEEEeCCCCCCCeeEEeeeEEEEEEEEEEEecCCCCceEEEEEEEEeCCCC
Q 022181 79 FDRGNFYDFTSLVRELDVPGEIYERKT-YPFEFSTVEMPYETYNGVNVRLRYVLKVTVSRGYGGSVVEYQDFVVRNYTPP 157 (301)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~G~L~~g~~-~pF~F~l~~~~~eSy~G~~~~irY~vkv~i~R~~~~~~~~~~eF~V~~~~~~ 157 (301)
|+++++++|++.+.+|+++|+|++| | |||+|++|+++||||+|+||+|||+|||+|+|||+ |++++++|||++.++.
T Consensus 82 ~~~~~~~~fls~~~eL~~~G~L~~g-~~fpF~F~~~~~~~eSy~G~~~~IrY~vrv~i~R~~~-di~~~~eF~V~~~~~~ 159 (341)
T 2fau_A 82 NDKSNTHEFVNLVKELALPGELTQS-RSYDFEFMQVEKPYESYIGANVRLRYFLKVTIVRRLT-DLVKEYDLIVHQLATY 159 (341)
T ss_dssp STTCCEEEEEEEEEEEECSEEECSC-EEEEEEECSCCCCSCCEECSSEEEEEEEEEEECCSSS-CEEEEEEEEECCCBCC
T ss_pred ecCCCcEEEEEEEEEEcCCCccCCC-cEEeeEeCCCCCCCcceEeeEEEEEEEEEEEEEecCc-ceeEEEEEEEEeCCCC
Confidence 9999999999999999999999999 7 99999999999999999999999999999999998 9999999999999888
Q ss_pred CCCCCCceeeecccceeEEEEEEeeeeEEcCCcEEEEEEEEEeeeeeeEEEEEEEEEEEecCCCceeEEeeEEEEEEEEe
Q 022181 158 PSINNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIIGKIYFLLVRIKIKNMDLEIRRRESTGSGANTHVETETLAKFELMD 237 (301)
Q Consensus 158 p~~~~pi~~ev~i~~~L~i~f~~~k~~y~l~d~i~G~i~f~~s~~~Ik~iel~LiR~Et~~~~~~~~~e~~~i~~~qi~d 237 (301)
|+.+.|++||++++|||||+|++++++|+++|+|+|+|+|++|+++|++||++|+|+|+|++++++.+|+++|+++||||
T Consensus 160 p~~~~pi~~evgied~L~ieF~~~ks~y~l~d~I~G~I~f~~s~i~Ik~iel~LiR~Et~~~~~~~~~e~~~i~k~eImD 239 (341)
T 2fau_A 160 PDVNNSIKMEVGIEDXLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEITGIGPSTTTETETIAKYEIMD 239 (341)
T ss_dssp CCCCCCEEEEEEETTTEEEEEEESCSEEETTCEEEEEEEEEEECSCEEEEEEEEEEEEEESCGGGCEEEEEEEEEEECCC
T ss_pred CCCCCCeEEEEeccccEEEEEEEccccccCCCeEEEEEEEEEeccceEEEEEEEEEEEEEcCCCCeeeEEEEEEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceeeEEEeeCCCcCCCccccccceEEEEEEEEEEEEECCCcEEEEeeEEEEEEecCC
Q 022181 238 GAPVRGESIPIRLFLSPYELTPTHRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITIYRLQEN 300 (301)
Q Consensus 238 G~~~rg~~IPirl~l~~~~ltPt~~~~~~~fsV~y~lnlvli~~~~~~y~k~~~I~L~R~~~~ 300 (301)
|+|+||++|||||+|+++.+|||+.++|++|||+|+|||+++|++|||||||+||+|||+.+.
T Consensus 240 G~p~rge~IPirl~Lp~~~l~PT~~~~~~~fsV~Y~Lnlvlvde~~rryfk~~EI~L~R~~~~ 302 (341)
T 2fau_A 240 GAPVKGESIPIRLFLAGYDPTPTMRDVNKKFSVRYFLNLVLVDEEDRRYFKQQEIILWRKAPE 302 (341)
T ss_dssp C------CEEEEEESTTTCCCCCEEEEETTEEEEEEEEEEEEETTCCEEEEEEEEEEECBCC-
T ss_pred CCccCCCEEEEEEEcCCCCCCCcchhcCCeEEEEEEEEEEEEeCCCCeeeeeeEEEEEECCCc
Confidence 999999999999999999999999999999999999999999999999999999999999864
No 2
>2r51_A Vacuolar protein sorting-associated protein 26B; retromer, fibronectin III, arrestin domain, membrane, phosphorylation, protein transport; 2.10A {Mus musculus} PDB: 3lh9_A 3lh8_A 3lha_A
Probab=100.00 E-value=1.7e-85 Score=620.59 Aligned_cols=290 Identities=58% Similarity=0.986 Sum_probs=283.2
Q ss_pred CCceEEEEEecCCCCceeEEeecCCCceEEeeeecCCCcEEEEEEEEeC-CCcEEEEeEEEEEEEEEEEEEEcCCCeEEE
Q 022181 9 KPACNISITFADGKNRKQVPLKKENGQTIMVPLFQSQENISGKISIEPV-LGKKVEHNGVKIELLGQIEMYFDRGNFYDF 87 (301)
Q Consensus 9 ~~~~~i~i~l~~~~~~~~~~~~~~~~~~~~~~iY~~Ge~VsG~V~i~~~-~~k~~~h~gI~i~~~G~~e~~~~~~~~~~~ 87 (301)
|.+|+|+|.||++++|+++++++++|+++++|+|++||+|+|+|+|+++ +||+++|+||+|++.|+++++|+++++++|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvY~~GE~VsG~V~I~~~~~~k~l~h~GIki~~~G~~e~~~~~~~~~~f 90 (340)
T 2r51_A 11 GQSVEVEILLNDAESRKRAEHKTEDGKKEKYFLFYDGETVSGKVSLSLKNPNKRLEHQGIKIEFIGQIELYYDRGNHHEF 90 (340)
T ss_dssp --CEEEEEEETTTTTSCEEEEECTTSCEEEEEEEETBCCEEEEEEEEESSTTSCEEESCEEEEEEEEEEEGGGTTCCEEE
T ss_pred CCCceEEEEECCCCccceEEeecCCCcEeecCcCCCCCEEEEEEEEEECCCCCeeEEEEEEEEEEEEEEEEecCCCcEEE
Confidence 6999999999999999999999999999999999999999999999998 788999999999999999999999999999
Q ss_pred EEeEEEecCCcccCCCceEEEEEeCCCCCCCeeEEeeeEEEEEEEEEEEecCCCCceEEEEEEEEeCCCCCCCCCCceee
Q 022181 88 TSLVRELDVPGEIYERKTYPFEFSTVEMPYETYNGVNVRLRYVLKVTVSRGYGGSVVEYQDFVVRNYTPPPSINNSIKME 167 (301)
Q Consensus 88 ~~~~~~l~~~G~L~~g~~~pF~F~l~~~~~eSy~G~~~~irY~vkv~i~R~~~~~~~~~~eF~V~~~~~~p~~~~pi~~e 167 (301)
++.+.+|+++|+|++|+||||+|+||+++||||+|+||+|||+|||+|+|||+ |++++++|||++.+..|+++.|++||
T Consensus 91 ~~~~~eL~~pG~L~~G~~fpF~F~lp~~l~eSy~G~~g~IrY~vkv~i~Rp~~-di~~~~eF~V~~~~~~p~~~~pIk~E 169 (340)
T 2r51_A 91 VSLVKDLARPGEITQSQAFDFEFTHVEKPYESYTGQNVKLRYFLRATISRRLN-DVVKEMDIVVHTLSTYPELNSSIKME 169 (340)
T ss_dssp EEEEEEEECSEEECSCEEEEEEECSBCCCSCCEECSSEEEEEEEEEEECCSSC-CEEEEEEEEEECCCCCCCCCCCEEEE
T ss_pred EEEEEEecCCCccCCCcEEeeEeCCCCCCCcCeEeeeEEEEEEEEEEEEecCC-CceEEEEEEEEeCCCCCccCCCEecc
Confidence 99999999999999999999999999999999999999999999999999998 99999999999998899999999999
Q ss_pred ecccceeEEEEEEeeeeEEcCCcEEEEEEEEEeeeeeeEEEEEEEEEEEecCCCceeEEeeEEEEEEEEeCCCCCCceee
Q 022181 168 VGIEDCLHIEFEYNKSKYHLKDVIIGKIYFLLVRIKIKNMDLEIRRRESTGSGANTHVETETLAKFELMDGAPVRGESIP 247 (301)
Q Consensus 168 v~i~~~L~i~f~~~k~~y~l~d~i~G~i~f~~s~~~Ik~iel~LiR~Et~~~~~~~~~e~~~i~~~qi~dG~~~rg~~IP 247 (301)
+++++||||+|++++++|+++|+|.|+|+|++|+++|++||++|+|+|+|++++++.+++++|+++|||||+|+||++||
T Consensus 170 vgi~~cl~Ie~~~~ks~y~lgd~I~G~I~f~~s~i~Ik~iel~LiR~Et~~~~~~~~~e~~~i~k~eImdG~p~rge~IP 249 (340)
T 2r51_A 170 VGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTGPNVYHENDTIAKYEIMDGAPVRGESIP 249 (340)
T ss_dssp EEETTTEEEEEEESCSEEETTCEEEEEEEEEEECSCEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEESCCCTTCEEE
T ss_pred ccCCceEEEEEEECcccccCCCeEEEEEEEEEeeceeEEEEEEEEEEEEEecCCCeeEEEEEEEEEEEecCCccCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeCCCcCCCccccccceEEEEEEEEEEEEECCCcEEEEeeEEEEEEecC
Q 022181 248 IRLFLSPYELTPTHRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITIYRLQE 299 (301)
Q Consensus 248 irl~l~~~~ltPt~~~~~~~fsV~y~lnlvli~~~~~~y~k~~~I~L~R~~~ 299 (301)
|||+|+++++|||+.++|++|||+|+|||+|+|++|++||||+||+|||+.+
T Consensus 250 irl~Lp~~~l~PT~~~~~~~fsV~Y~Lnlvl~~e~~~~~~kq~pI~L~R~~~ 301 (340)
T 2r51_A 250 IRLFLAGYELTPTMRDINKKFSVRYYLNLVLIDEEERRYFKQQEVVLWRKGD 301 (340)
T ss_dssp EEEEGGGSCCCCCEEEETTTEEEEEEEEEEEEETTCCEEEEEEEEEEECCC-
T ss_pred EEEECCCCCCCCCccccCCeEEEEEEEEEEEEeCCCcEEEEEeeEEEEECCC
Confidence 9999999999999999999999999999999999999999999999999987
No 3
>1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A
Probab=99.88 E-value=1.1e-20 Score=182.03 Aligned_cols=266 Identities=15% Similarity=0.137 Sum_probs=184.8
Q ss_pred CCceEEEEEecCCCCceeEEeecCCCceEEeeeecCCCcEEEEEEEEeCCCcEEEEeEEEEEEEEEEEEEEcCCC-----
Q 022181 9 KPACNISITFADGKNRKQVPLKKENGQTIMVPLFQSQENISGKISIEPVLGKKVEHNGVKIELLGQIEMYFDRGN----- 83 (301)
Q Consensus 9 ~~~~~i~i~l~~~~~~~~~~~~~~~~~~~~~~iY~~Ge~VsG~V~i~~~~~k~~~h~gI~i~~~G~~e~~~~~~~----- 83 (301)
+|...|.|.|. +|..+ -.+..+|.|+|.|.|... .++.+.|.+++.+.. .|.++.
T Consensus 13 s~n~~i~~yl~---krdfv------------d~~~~~d~V~GvV~id~~---~lk~r~v~v~l~~~f--rygr~~~~v~g 72 (393)
T 1g4m_A 13 SPNGKLTVYLG---KRDFV------------DHIDLVEPVDGVVLVDPE---YLKERRVYVTLTCAF--RYGREDLDVLG 72 (393)
T ss_dssp CTTSSCEEEES---CSEEE------------ECSSCBCCEEEEEECCHH---HHTTCEEEEEEEEEE--EESCTTCCCTT
T ss_pred CCCCeEEEEeC---CceEE------------EecCCCCEEEEEEEEehh---HhcccEEEEEEEEEE--EecCCcceecc
Confidence 45555666664 34443 246789999999999876 677888877777533 122221
Q ss_pred ---eEEEEEeEEEe-cCCc--ccC-----------CCce-EEEEEeCCCCCCCeeE--------EeeeEEEEEEEEEEEe
Q 022181 84 ---FYDFTSLVREL-DVPG--EIY-----------ERKT-YPFEFSTVEMPYETYN--------GVNVRLRYVLKVTVSR 137 (301)
Q Consensus 84 ---~~~~~~~~~~l-~~~G--~L~-----------~g~~-~pF~F~l~~~~~eSy~--------G~~~~irY~vkv~i~R 137 (301)
..+++..+..+ .+++ +.+ +|.| |||+|+||..+|+||+ |.+++|||.|+|.++|
T Consensus 73 ~~f~ke~~~~~~~v~p~~~~~~~~lt~lqe~l~~~~G~h~fPF~f~LP~~lPsSfelq~~~~d~G~~g~IrY~Vka~i~~ 152 (393)
T 1g4m_A 73 LTFRKDLFVANVQSFPPAPEDKKPLTRLQERLIKKLGEHAYPFTFEIPPNLPCSVTLQPGPEDTGKACGVDYEVKAFCAE 152 (393)
T ss_dssp TCEEEEEEEEEEEEESCSTTSCCCCCHHHHHHHHHSCTTEEEEEECCCTTSCCCEEEECCGGGGGGCEEEEEEEEEEEES
T ss_pred cccceeEEEEEEEEeCCCCcccCccchhhhhhhccCCceEEEEEeeCCCCCCceEEEccccccCCCcEEEEEEEEEEEcC
Confidence 34454454444 2333 233 8999 9999999999999999 9999999999999999
Q ss_pred cCCCCceEEEEEEEE---eCCCCCC-CCCCceeeecc-----cceeEEEEEEeeeeEEcCCcEEEEEEE-EEeeeeeeEE
Q 022181 138 GYGGSVVEYQDFVVR---NYTPPPS-INNSIKMEVGI-----EDCLHIEFEYNKSKYHLKDVIIGKIYF-LLVRIKIKNM 207 (301)
Q Consensus 138 ~~~~~~~~~~eF~V~---~~~~~p~-~~~pi~~ev~i-----~~~L~i~f~~~k~~y~l~d~i~G~i~f-~~s~~~Ik~i 207 (301)
++ .+...+..+++. ..+..|. ...+...+... ++++++++.+++++|.+||.|.-.+.+ |.|+..|+.|
T Consensus 153 ~~-~~k~~K~~~v~l~i~~l~~~p~~~~~~~~~e~~k~fc~~sG~l~l~~sldk~~Y~pGE~I~v~v~I~N~S~k~Vk~I 231 (393)
T 1g4m_A 153 NL-EEKIHKRNSVRLVIRKVQYAPERPGPQPTAETTRQFLMSDKPLHLEASLDKEIYYHGEPISVNVHVTNNTNKTVKKI 231 (393)
T ss_dssp ST-TSCCCGGGEEEEEEEEEECCCCCCSSCCCCEEEEECBSSSSCEEEEEEESCSEEETTCCEEEEEEEEECSSCCEEEE
T ss_pred Cc-ccccceEEEEEEeccccccCchhhcCCCceEEEEEEEEcCCCEEEEEEECCceEcCCCEEEEEEEEEcCCCCEEeEE
Confidence 85 344333333322 2233332 22343444432 467899999999999999999988888 5778999999
Q ss_pred EEEEEEEEEe--cCCCceeEEeeEEEEEEEEeCCCCCCceeeEEEeeCCCcCCC-----------------ccccccceE
Q 022181 208 DLEIRRREST--GSGANTHVETETLAKFELMDGAPVRGESIPIRLFLSPYELTP-----------------THRNINNKF 268 (301)
Q Consensus 208 el~LiR~Et~--~~~~~~~~e~~~i~~~qi~dG~~~rg~~IPirl~l~~~~ltP-----------------t~~~~~~~f 268 (301)
++.|+|..++ .+.. .. ..+|+..+-.+ .+.+|.+.-..+.| ++.++| |....|.++
T Consensus 232 kv~L~Q~~~~~~~s~~-~~--k~~Va~~e~~~-~V~~gs~~~~~~~L-~P~l~p~~~~~~~aldg~lk~~dt~l~ss~ii 306 (393)
T 1g4m_A 232 KISVRQYADICLFNTA-QY--KCPVAMEEADD-TVAPSSTFCKVYTL-TPFLANNREKRGLALDGKLKHEDTNLASSTLL 306 (393)
T ss_dssp EEEEEEEEEECSSBCE-EE--EEEEEEEEECC-CBCTTEEEEEEEEE-CCCGGGTTTCSSEEESSCTTSTTCCBCCCCCC
T ss_pred EEEEEEEEEEEEecCC-ce--EEEEEEEecCC-cCCCCCEEeeEEEE-cCCCCCcccccceeeccccccCCcccccceee
Confidence 9999998854 2222 11 25677655444 45667776666677 666776 665678888
Q ss_pred E-----------EEEEEEEEEEECCCc--------EEEEeeEEEEEEecCC
Q 022181 269 S-----------VKYYLNLVLVDEEDR--------RYFKQQEITIYRLQEN 300 (301)
Q Consensus 269 s-----------V~y~lnlvli~~~~~--------~y~k~~~I~L~R~~~~ 300 (301)
+ |+|+|.+.+.-..|- -.--+.||+|-.-.|.
T Consensus 307 ~~~~~~~~~gi~VsY~vkV~l~v~~gg~~~~~~~~~l~~~lPi~i~~p~p~ 357 (393)
T 1g4m_A 307 REGANREILGIIVSYKVKVKLVVSRGGLLGDLASSDVAVELPFTLMHPKPK 357 (393)
T ss_dssp CTTCCSGGGSEEEEEEEEEEEEECCC--------CEEEEEEEEEEECCCCC
T ss_pred cCCCCccccceEEEEEEEEEEEecCCCcccccccccEEEEeCEEEecCCCC
Confidence 8 999999998776543 6777889998876553
No 4
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=99.83 E-value=2.5e-17 Score=157.76 Aligned_cols=266 Identities=15% Similarity=0.162 Sum_probs=181.0
Q ss_pred CCceEEEEEecCCCCceeEEeecCCCceEEeeeecCCCcEEEEEEEEeCCCcEEEEeEEEEEEEEEEEEEEcCC------
Q 022181 9 KPACNISITFADGKNRKQVPLKKENGQTIMVPLFQSQENISGKISIEPVLGKKVEHNGVKIELLGQIEMYFDRG------ 82 (301)
Q Consensus 9 ~~~~~i~i~l~~~~~~~~~~~~~~~~~~~~~~iY~~Ge~VsG~V~i~~~~~k~~~h~gI~i~~~G~~e~~~~~~------ 82 (301)
+|...|.+-|- +|+.+... ...|.|.|.|.|... .++.|-|.+.|.+.- .|.+.
T Consensus 12 s~n~~~t~yl~---krd~vd~~------------~~vd~vdGvV~vd~~---~lk~rkv~~~l~~~f--ryGred~~v~G 71 (392)
T 1suj_A 12 CPNAKLSIYLG---KRDFVDHV------------EHVEPVDGVVLIDPE---YLKDRKVFVTLTCAF--RYGRDDLDLIG 71 (392)
T ss_dssp CTTSSEEEEES---CSEEEECS------------SCBCCEEEEEEECTT---TSSSCEEEEEEEEEE--EEECCSSCCSS
T ss_pred CCCCeEEEEEC---CceEEeec------------CccCceeeEEEEcHH---HhccceEEEEEEEee--ccCCCchhcCc
Confidence 56666777764 56666442 356999999999876 368899999999533 23211
Q ss_pred --CeEEEEEeEEEecCC--c-cc---------CCCce-EEEEEeCCCCCCCee--------EEeeeEEEEEEEEEEEecC
Q 022181 83 --NFYDFTSLVRELDVP--G-EI---------YERKT-YPFEFSTVEMPYETY--------NGVNVRLRYVLKVTVSRGY 139 (301)
Q Consensus 83 --~~~~~~~~~~~l~~~--G-~L---------~~g~~-~pF~F~l~~~~~eSy--------~G~~~~irY~vkv~i~R~~ 139 (301)
-..+++..+..+-++ + .+ +.|.| |||+|+||..+|+|| +|+++.|||.|||.++|+|
T Consensus 72 l~f~kel~~~~~qv~p~~~~~~~t~lQe~Ll~~~G~h~fPFsFqLP~~lPsSf~lqp~~~~eGk~g~VrY~VKa~i~~~~ 151 (392)
T 1suj_A 72 MSFRKDLYSLATQVYPPETKEPLTPLQEKLMKKLGAHAYPFCFKMGTNLPCSVTLQPGPDDTGKSCGVDFEVKAFCAENL 151 (392)
T ss_dssp CEEEEEEEEEEEEEESCCSCCCCCHHHHHHHHHHCSSEEEEEECCCSSCCCCEEECCCTTCCSCCEEEEEEEEEEEESCT
T ss_pred ceEEEEEEEEEEEEeCCCCCccccHHHHHhhhcccCeeEeEEeeCCCCCCCeEEeccCCccCCCceeEEEEEEEEEcCCh
Confidence 134655555555332 1 22 78999 999999999999998 6999999999999999998
Q ss_pred CCC----ceEEEEEEEEeCCCCCCC-CCCceeeecc-----cceeEEEEEEeeeeEEcCCcEEEEEEE-EEeeeeeeEEE
Q 022181 140 GGS----VVEYQDFVVRNYTPPPSI-NNSIKMEVGI-----EDCLHIEFEYNKSKYHLKDVIIGKIYF-LLVRIKIKNMD 208 (301)
Q Consensus 140 ~~~----~~~~~eF~V~~~~~~p~~-~~pi~~ev~i-----~~~L~i~f~~~k~~y~l~d~i~G~i~f-~~s~~~Ik~ie 208 (301)
... .+....+...+. .|.. ..+...++.. .++|++++.+|+.+|.+||.|.-.+.+ |.|+..|+.|.
T Consensus 152 ~dk~~Kr~tv~l~ir~l~~--~P~~~~~~p~~e~~k~f~~ssGpl~l~vsLdK~~Y~pGE~I~V~v~I~N~Ssk~Vk~Ik 229 (392)
T 1suj_A 152 EEKIHKRNSVQLVIRKVQF--APANLGVAPKTEITRQFMLSDRPLHLEASLDKEIYYHGEPINVNVKINNTTGKIVKKIK 229 (392)
T ss_dssp TSCCCGGGEEEEEEEEEEC--CCSSCCCCCCCEEEEEEEETTEEEEEEEEESCSEEETTCCEEEEEEEEECSSSEEEEEE
T ss_pred hhccceEEEEEEeeecccc--CccccCCCCeeEEEEEeEecCCCEEEEEEeCCccccCCCEEEEEEEEECCCCCcEeEEE
Confidence 321 122222333332 2321 1122333322 467999999999999999999988888 57888999999
Q ss_pred EEEEEEEEecC-CCceeEEeeEEEEEEEEeCCCCCCceeeEEEeeCCCcCC-----------------Cccccccce---
Q 022181 209 LEIRRRESTGS-GANTHVETETLAKFELMDGAPVRGESIPIRLFLSPYELT-----------------PTHRNINNK--- 267 (301)
Q Consensus 209 l~LiR~Et~~~-~~~~~~e~~~i~~~qi~dG~~~rg~~IPirl~l~~~~lt-----------------Pt~~~~~~~--- 267 (301)
+.|++.-++-. ..++. ...++..+- ++.+.+|.+.-..+.|. +.++ ||....+..
T Consensus 230 v~L~Q~~~v~l~s~~~~--k~~Va~~e~-~e~V~pgst~~k~~~L~-P~l~~n~~k~glaldg~lk~~dTnLassti~~~ 305 (392)
T 1suj_A 230 IIVEQVTDVVLFSLDKY--VKTVCAEET-NDTVAANSTLSKTFSVT-PMLANNREKRGLALDGKLKHEDTNLASTTVIRP 305 (392)
T ss_dssp EEEEEEEEECSSSCCEE--EEEEEEEEC-CCCBCTTEEEEEEEEEC-CCGGGCSCCTTCCBSSCTTBSSCCBCCCCCCCT
T ss_pred EEEEEEEEEEEecCCcE--EEEEEEEec-CCCcCCCCEEEEEEEEe-ccccCCCccceeeecccccCCCccccccccccC
Confidence 99999999742 11111 345555442 33666777755555664 3344 454322332
Q ss_pred --------EEEEEEEEEEEEECCC--------cEEEEeeEEEEEEecCC
Q 022181 268 --------FSVKYYLNLVLVDEED--------RRYFKQQEITIYRLQEN 300 (301)
Q Consensus 268 --------fsV~y~lnlvli~~~~--------~~y~k~~~I~L~R~~~~ 300 (301)
+.|+|+|.|.+...-| .-..-..||+|-+-+|.
T Consensus 306 ~~~~~~~gI~VsY~vkVkl~v~~gg~~~~~~s~d~~velPf~L~~p~P~ 354 (392)
T 1suj_A 306 GMDKEVLGILVSYKVKVHLVVARGGILGDLTSSDVAVELPLTLMHPKPS 354 (392)
T ss_dssp TSCGGGGSEEEEEEEEEEEEEETTSSTTCCCCEEEEEEEEEEEECCCCC
T ss_pred CCCccccceEEEEEEEEEEEEcCCcccccccccCeeEEECeEEeCCCCC
Confidence 6999999999988764 37888899999887775
No 5
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A
Probab=99.58 E-value=1.8e-11 Score=115.84 Aligned_cols=247 Identities=13% Similarity=0.126 Sum_probs=158.9
Q ss_pred CCcEEEEEEEEeCCCcEEEEeEEEEEEEEEEEEEEcCCC--------eEEEEEeEEEecCCc-------ccCC------C
Q 022181 45 QENISGKISIEPVLGKKVEHNGVKIELLGQIEMYFDRGN--------FYDFTSLVRELDVPG-------EIYE------R 103 (301)
Q Consensus 45 Ge~VsG~V~i~~~~~k~~~h~gI~i~~~G~~e~~~~~~~--------~~~~~~~~~~l~~~G-------~L~~------g 103 (301)
=|.|.|.|.|... -++-+-|.+++.... .|.+.. ..|++-...++-|+. .|.+ |
T Consensus 48 vdpvdGvv~vd~~---~~~~rkvf~~l~~~f--RYGred~dV~Gl~F~kdl~~~~~qvyP~~~~~~~lT~lQe~L~kKlG 122 (380)
T 3ugu_A 48 VEPVDGVVLVDPE---LVKGKRVYVSLTCAF--RYGQEDIDVMGLSFRRDLYFSQVQVFPPVGASGATTRLQESLIKKLG 122 (380)
T ss_dssp BCCEEEEEEECHH---HHTTCEEEEEEEEEE--EECC------CCCEEEEEEEEEEEEESCCSCCCCCCHHHHHHHHHHC
T ss_pred ccccceEEEECHH---HhCCCEEEEEEEEEE--ecCCCccccccchhhhhhhheeEEecCCCCCCCCCCHHHHHHHHHhC
Confidence 3889999999864 233455666665322 343322 456665666664442 1222 8
Q ss_pred ce-EEEEEeCCCCCCCeeE--------EeeeEEEEEEEEEEEecCC--CC-----ceEEEEEEEEeCCCCCCCCCCceee
Q 022181 104 KT-YPFEFSTVEMPYETYN--------GVNVRLRYVLKVTVSRGYG--GS-----VVEYQDFVVRNYTPPPSINNSIKME 167 (301)
Q Consensus 104 ~~-~pF~F~l~~~~~eSy~--------G~~~~irY~vkv~i~R~~~--~~-----~~~~~eF~V~~~~~~p~~~~pi~~e 167 (301)
.| |||.|.+|..+|+|+. |+.+.|+|.|||.+.++|. .+ -+....+...++++. ....+-..|
T Consensus 123 ~nayPF~f~LP~~lPsSv~LQp~p~d~Gk~cgV~YeVKafia~~~~~~~dk~~Kr~sV~L~Irklq~aP~-~~~~~P~~e 201 (380)
T 3ugu_A 123 ANTYPFLLTFPDYLPCSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIRKVQHAPR-DMGPQPRAE 201 (380)
T ss_dssp TTEEEEEECCCSSCCCSEEECCCTTCCSCCEEEEEEEEEEEEBCCSSSSSBCCGGGEEEEEEEEEEBCCS-CCCCCCEEE
T ss_pred cCceeEEEeCCCCCCCEEEeccCCccCCCccceEEEEEEEEccCcccccccccccceEEEeeeecccCCc-ccCCCCcce
Confidence 88 9999999999999996 7888999999999999982 22 233344444444322 223333556
Q ss_pred ecc-----cceeEEEEEEeeeeEEcCCcEEEEEEE-EEeeeeeeEEEEEEEEEEEecCC-CceeEEeeEEEEEEEEeCCC
Q 022181 168 VGI-----EDCLHIEFEYNKSKYHLKDVIIGKIYF-LLVRIKIKNMDLEIRRRESTGSG-ANTHVETETLAKFELMDGAP 240 (301)
Q Consensus 168 v~i-----~~~L~i~f~~~k~~y~l~d~i~G~i~f-~~s~~~Ik~iel~LiR~Et~~~~-~~~~~e~~~i~~~qi~dG~~ 240 (301)
+.. +++|++++.+++.+|.+||.|.-.+.+ |.|+..|+.|.++|++..++-.- .++ -..+++..|..| .+
T Consensus 202 ~~K~F~~ssGpl~L~vsLdK~~Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~~v~l~s~~~--y~~~Va~~E~~e-pV 278 (380)
T 3ugu_A 202 ASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDY--YIKTVAAEEAQE-KV 278 (380)
T ss_dssp EEEECTTCCCEEEEEEEESCSEEETTCCEEEEEEEEECSSSCEEEEEEEEEEEEEECSSSCCE--EEEEEEEEECSC-CB
T ss_pred EEEEeEecCCCEEEEEEeCCccCcCCCEEEEEEEEEcCCCCeEeEEEEEEEEEEEEEEecCCe--EEEEEEEeccCC-cC
Confidence 553 478999999999999999999988998 58888999999999999987532 222 223456555332 44
Q ss_pred CCCceeeEEEeeCCC---------------------cCCCccc------cccceEEEEEEEEEEEEECC--C----cEEE
Q 022181 241 VRGESIPIRLFLSPY---------------------ELTPTHR------NINNKFSVKYYLNLVLVDEE--D----RRYF 287 (301)
Q Consensus 241 ~rg~~IPirl~l~~~---------------------~ltPt~~------~~~~~fsV~y~lnlvli~~~--~----~~y~ 287 (301)
.+|.+.-=.+.|.|+ .|+.|.. ...=.+-|+|.++|-++-.- | --..
T Consensus 279 ~pgst~~k~~~l~P~l~~n~~krglALdG~lk~edtnLASsT~~~~~~~ke~~GI~VsY~VkVkl~v~~lgg~~~~sdv~ 358 (380)
T 3ugu_A 279 PPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVA 358 (380)
T ss_dssp CTTEEEEEEEEECCCGGGCSCCTTSCBSSCTTCTTCCBCCCCCCCTTCCGGGGSEEEEEEEEEEEEECCCTTCSSCEEEE
T ss_pred CCCCeEEeeEEEEEecccCCceeeEEecceeccCCCcccceeEecCCCCCcceEEEEEEEEEEEEEEecccCCccccceE
Confidence 455442111223322 2333321 12234679999999998763 4 3666
Q ss_pred EeeEEEEEEecCC
Q 022181 288 KQQEITIYRLQEN 300 (301)
Q Consensus 288 k~~~I~L~R~~~~ 300 (301)
-..|.+|-+-+|.
T Consensus 359 ~elPf~Lmhp~P~ 371 (380)
T 3ugu_A 359 TEVPFRLMHPQPE 371 (380)
T ss_dssp EEEEEEEEBCCC-
T ss_pred EEecccccCCCCC
Confidence 6788888877664
No 6
>2r51_A Vacuolar protein sorting-associated protein 26B; retromer, fibronectin III, arrestin domain, membrane, phosphorylation, protein transport; 2.10A {Mus musculus} PDB: 3lh9_A 3lh8_A 3lha_A
Probab=97.44 E-value=0.0041 Score=58.40 Aligned_cols=108 Identities=15% Similarity=0.162 Sum_probs=78.2
Q ss_pred eecCCCcEEEEEEEEeCCCcEEEEeEEEEEEEEEEEEEEcCCCeEEEEEeEEEec----CCcccCCCceEEEEEeCCC-C
Q 022181 41 LFQSQENISGKISIEPVLGKKVEHNGVKIELLGQIEMYFDRGNFYDFTSLVRELD----VPGEIYERKTYPFEFSTVE-M 115 (301)
Q Consensus 41 iY~~Ge~VsG~V~i~~~~~k~~~h~gI~i~~~G~~e~~~~~~~~~~~~~~~~~l~----~~G~L~~g~~~pF~F~l~~-~ 115 (301)
.|.+||.|.|+|.+.+. .++.+.|.+.+.- .|+.....+ ....+.+++ .+|.--.|.++||.+.+|. .
T Consensus 186 ~y~lgd~I~G~I~f~~s---~i~Ik~iel~LiR-~Et~~~~~~---~~~e~~~i~k~eImdG~p~rge~IPirl~Lp~~~ 258 (340)
T 2r51_A 186 KYHLKDVIVGKIYFLLV---RIKIKHMEIDIIK-RETTGTGPN---VYHENDTIAKYEIMDGAPVRGESIPIRLFLAGYE 258 (340)
T ss_dssp EEETTCEEEEEEEEEEE---CSCEEEEEEEEEE-EEEEEETTE---EEEEEEEEEEEEEEESCCCTTCEEEEEEEGGGSC
T ss_pred cccCCCeEEEEEEEEEe---eceeEEEEEEEEE-EEEEecCCC---eeEEEEEEEEEEEecCCccCCCEEEEEEECCCCC
Confidence 79999999999999865 3467777777763 343322111 111111121 2455566778999999985 7
Q ss_pred CCCeeE--EeeeEEEEEEEEEEEecCCCCceEEEEEEEEeCC
Q 022181 116 PYETYN--GVNVRLRYVLKVTVSRGYGGSVVEYQDFVVRNYT 155 (301)
Q Consensus 116 ~~eSy~--G~~~~irY~vkv~i~R~~~~~~~~~~eF~V~~~~ 155 (301)
+++||. ....+|+|+|.+++.=.-..++.++.++++.+..
T Consensus 259 l~PT~~~~~~~fsV~Y~Lnlvl~~e~~~~~~kq~pI~L~R~~ 300 (340)
T 2r51_A 259 LTPTMRDINKKFSVRYYLNLVLIDEEERRYFKQQEVVLWRKG 300 (340)
T ss_dssp CCCCEEEETTTEEEEEEEEEEEEETTCCEEEEEEEEEEECCC
T ss_pred CCCCccccCCeEEEEEEEEEEEEeCCCcEEEEEeeEEEEECC
Confidence 999999 7889999999999988776689999999998754
No 7
>1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A
Probab=97.43 E-value=0.0045 Score=59.26 Aligned_cols=109 Identities=16% Similarity=0.222 Sum_probs=75.9
Q ss_pred eecCCCcEEEEEEEEeCCCcEEEEeEEEEEEEEEEEEE-EcCCCeEEEEEeEEEecCCcccCCCceEEEEEeCCCCCCC-
Q 022181 41 LFQSQENISGKISIEPVLGKKVEHNGVKIELLGQIEMY-FDRGNFYDFTSLVRELDVPGEIYERKTYPFEFSTVEMPYE- 118 (301)
Q Consensus 41 iY~~Ge~VsG~V~i~~~~~k~~~h~gI~i~~~G~~e~~-~~~~~~~~~~~~~~~l~~~G~L~~g~~~pF~F~l~~~~~e- 118 (301)
.|.+||+|.-.|.|++...| ..++|++.+...++.. +..++.. .....+.....+++|.++...|.|++.+++
T Consensus 207 ~Y~pGE~I~v~v~I~N~S~k--~Vk~Ikv~L~Q~~~~~~~s~~~~k---~~Va~~e~~~~V~~gs~~~~~~~L~P~l~p~ 281 (393)
T 1g4m_A 207 IYYHGEPISVNVHVTNNTNK--TVKKIKISVRQYADICLFNTAQYK---CPVAMEEADDTVAPSSTFCKVYTLTPFLANN 281 (393)
T ss_dssp EEETTCCEEEEEEEEECSSC--CEEEEEEEEEEEEEECSSBCEEEE---EEEEEEEECCCBCTTEEEEEEEEECCCGGGT
T ss_pred eEcCCCEEEEEEEEEcCCCC--EEeEEEEEEEEEEEEEEecCCceE---EEEEEEecCCcCCCCCEEeeEEEEcCCCCCc
Confidence 89999999999999988644 7899999999888643 3333221 111222212247777777778888655443
Q ss_pred -----------------eeEE-eeeE-----------EEEEEEEEEEecCCC--------CceEEEEEEEEeC
Q 022181 119 -----------------TYNG-VNVR-----------LRYVLKVTVSRGYGG--------SVVEYQDFVVRNY 154 (301)
Q Consensus 119 -----------------Sy~G-~~~~-----------irY~vkv~i~R~~~~--------~~~~~~eF~V~~~ 154 (301)
+... .-.+ |.|.|+|.+.-++.. ++..+.+|++..+
T Consensus 282 ~~~~~~aldg~lk~~dt~l~ss~ii~~~~~~~~~gi~VsY~vkV~l~v~~gg~~~~~~~~~l~~~lPi~i~~p 354 (393)
T 1g4m_A 282 REKRGLALDGKLKHEDTNLASSTLLREGANREILGIIVSYKVKVKLVVSRGGLLGDLASSDVAVELPFTLMHP 354 (393)
T ss_dssp TTCSSEEESSCTTSTTCCBCCCCCCCTTCCSGGGSEEEEEEEEEEEEECCC--------CEEEEEEEEEEECC
T ss_pred ccccceeeccccccCCcccccceeecCCCCccccceEEEEEEEEEEEecCCCcccccccccEEEEeCEEEecC
Confidence 2222 2345 999999999999843 8999999999864
No 8
>2fau_A Vacuolar protein sorting 26; arrestin, retromer, protein transport; HET: CAF; 2.10A {Homo sapiens}
Probab=97.40 E-value=0.0081 Score=56.37 Aligned_cols=110 Identities=15% Similarity=0.257 Sum_probs=70.7
Q ss_pred eecCCCcEEEEEEEEeCCCcEEEEeEEEEEEEEEEEEE-EcCCCeEEEEEeE-EEecCCcccCCCceEEEEEeCCC-CCC
Q 022181 41 LFQSQENISGKISIEPVLGKKVEHNGVKIELLGQIEMY-FDRGNFYDFTSLV-RELDVPGEIYERKTYPFEFSTVE-MPY 117 (301)
Q Consensus 41 iY~~Ge~VsG~V~i~~~~~k~~~h~gI~i~~~G~~e~~-~~~~~~~~~~~~~-~~l~~~G~L~~g~~~pF~F~l~~-~~~ 117 (301)
.|..||.|.|++.+.+. .++.+.|.+.+.- .|+. ...+...+--... .++ .+|.--.|.++||.+.+|. .++
T Consensus 186 ~y~l~d~I~G~I~f~~s---~i~Ik~iel~LiR-~Et~~~~~~~~~e~~~i~k~eI-mDG~p~rge~IPirl~Lp~~~l~ 260 (341)
T 2fau_A 186 KYHLKDVIVGKIYFLLV---RIKIQHMELQLIK-KEITGIGPSTTTETETIAKYEI-MDGAPVKGESIPIRLFLAGYDPT 260 (341)
T ss_dssp EEETTCEEEEEEEEEEE---CSCEEEEEEEEEE-EEEESCGGGCEEEEEEEEEEEC-CCC------CEEEEEESTTTCCC
T ss_pred cccCCCeEEEEEEEEEe---ccceEEEEEEEEE-EEEEcCCCCeeeEEEEEEEEEE-eCCCccCCCEEEEEEEcCCCCCC
Confidence 89999999999999865 3468888888874 3433 1222111111111 222 3466677778999999996 799
Q ss_pred CeeE--EeeeEEEEEEEEEEEecCCCCceEEEEEEEEeCC
Q 022181 118 ETYN--GVNVRLRYVLKVTVSRGYGGSVVEYQDFVVRNYT 155 (301)
Q Consensus 118 eSy~--G~~~~irY~vkv~i~R~~~~~~~~~~eF~V~~~~ 155 (301)
+||. ....+++|+|.+++.=.-....-+..|++..+..
T Consensus 261 PT~~~~~~~fsV~Y~Lnlvlvde~~rryfk~~EI~L~R~~ 300 (341)
T 2fau_A 261 PTMRDVNKKFSVRYFLNLVLVDEEDRRYFKQQEIILWRKA 300 (341)
T ss_dssp CCEEEEETTEEEEEEEEEEEEETTCCEEEEEEEEEEECBC
T ss_pred CcchhcCCeEEEEEEEEEEEEeCCCCeeeeeeEEEEEECC
Confidence 9999 8889999999999943322235666777777654
No 9
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=97.25 E-value=0.0099 Score=56.78 Aligned_cols=108 Identities=19% Similarity=0.247 Sum_probs=76.7
Q ss_pred eecCCCcEEEEEEEEeCCCcEEEEeEEEEEEEEEEEEE-EcCCCeEEEEEeEEEecCCcccCCCceEEEEEeCCCCCC--
Q 022181 41 LFQSQENISGKISIEPVLGKKVEHNGVKIELLGQIEMY-FDRGNFYDFTSLVRELDVPGEIYERKTYPFEFSTVEMPY-- 117 (301)
Q Consensus 41 iY~~Ge~VsG~V~i~~~~~k~~~h~gI~i~~~G~~e~~-~~~~~~~~~~~~~~~l~~~G~L~~g~~~pF~F~l~~~~~-- 117 (301)
.|++||+|.=.|.|++...| .++.|++.+.=.+... |+.++. -.....+...+.+++|.++.+.+.|.+.++
T Consensus 204 ~Y~pGE~I~V~v~I~N~Ssk--~Vk~Ikv~L~Q~~~v~l~s~~~~---k~~Va~~e~~e~V~pgst~~k~~~L~P~l~~n 278 (392)
T 1suj_A 204 IYYHGEPINVNVKINNTTGK--IVKKIKIIVEQVTDVVLFSLDKY---VKTVCAEETNDTVAANSTLSKTFSVTPMLANN 278 (392)
T ss_dssp EEETTCCEEEEEEEEECSSS--EEEEEEEEEEEEEEECSSSCCEE---EEEEEEEECCCCBCTTEEEEEEEEECCCGGGC
T ss_pred cccCCCEEEEEEEEECCCCC--cEeEEEEEEEEEEEEEEecCCcE---EEEEEEEecCCCcCCCCEEEEEEEEeccccCC
Confidence 89999999999999998755 7899999999777653 443322 122223333336777877777777664333
Q ss_pred ---------------C------e---------eEEeeeEEEEEEEEEEEecCCC--------CceEEEEEEEEeCC
Q 022181 118 ---------------E------T---------YNGVNVRLRYVLKVTVSRGYGG--------SVVEYQDFVVRNYT 155 (301)
Q Consensus 118 ---------------e------S---------y~G~~~~irY~vkv~i~R~~~~--------~~~~~~eF~V~~~~ 155 (301)
+ | ..| +.|.|.|+|.+.-++.. ++..+.+|++..+.
T Consensus 279 ~~k~glaldg~lk~~dTnLassti~~~~~~~~~~g--I~VsY~vkVkl~v~~gg~~~~~~s~d~~velPf~L~~p~ 352 (392)
T 1suj_A 279 REKRGLALDGKLKHEDTNLASTTVIRPGMDKEVLG--ILVSYKVKVHLVVARGGILGDLTSSDVAVELPLTLMHPK 352 (392)
T ss_dssp SCCTTCCBSSCTTBSSCCBCCCCCCCTTSCGGGGS--EEEEEEEEEEEEEETTSSTTCCCCEEEEEEEEEEEECCC
T ss_pred CccceeeecccccCCCccccccccccCCCCccccc--eEEEEEEEEEEEEcCCcccccccccCeeEEECeEEeCCC
Confidence 1 2 122 69999999999998743 99999999987643
No 10
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=94.43 E-value=3.4 Score=41.45 Aligned_cols=113 Identities=13% Similarity=0.131 Sum_probs=64.5
Q ss_pred eEEEEEecCCCCceeEEeecCCCce---EEeeeecCCCcEEEEEEEEeCCCcEEEEeEEEEEEEEEEEEEEcCCCeEEEE
Q 022181 12 CNISITFADGKNRKQVPLKKENGQT---IMVPLFQSQENISGKISIEPVLGKKVEHNGVKIELLGQIEMYFDRGNFYDFT 88 (301)
Q Consensus 12 ~~i~i~l~~~~~~~~~~~~~~~~~~---~~~~iY~~Ge~VsG~V~i~~~~~k~~~h~gI~i~~~G~~e~~~~~~~~~~~~ 88 (301)
+.+....++...++++.++...+.. ..-|+|+|||+|.-++.+...+.++.. +-+.++ +.-.+++...
T Consensus 82 v~v~~~~~~~~~~~~v~v~~~~~~~fi~TDr~iYrPGqtV~~r~i~~d~~~~p~~-~~~~v~------i~dP~g~~i~-- 152 (627)
T 3hrz_A 82 VVVQVTGPQVRLEKVVLLSYQSSFLFIQTDKGIYTPGSPVLYRVFSMDHNTSKMN-KTVIVE------FQTPEGILVS-- 152 (627)
T ss_dssp EEEEEEETTEEEEEEEEEECCCSCEEEEESCSEECTTCEECEEEEESCC--------CEEEE------EECTTCCEEE--
T ss_pred EEEEEEcCCceEEEEEEEEcCCCcEEEECCCCccCCCCEEEEEEEEECCCCcccC-ccEEEE------EECCCCCEEE--
Confidence 4455555444456667777666644 467899999999999988766555542 223322 2223443333
Q ss_pred EeEEEecCCcccCCCceEEEEEeCCCCCCCeeEEeeeEEEEEEEEEEEecCCCCceEEEEEEEEeC
Q 022181 89 SLVRELDVPGEIYERKTYPFEFSTVEMPYETYNGVNVRLRYVLKVTVSRGYGGSVVEYQDFVVRNY 154 (301)
Q Consensus 89 ~~~~~l~~~G~L~~g~~~pF~F~l~~~~~eSy~G~~~~irY~vkv~i~R~~~~~~~~~~eF~V~~~ 154 (301)
. ..+.. + |.++|+||+.... | .|.|+|..... . ......|.|..+
T Consensus 153 ~--~~~~~------~--~~~~f~Lp~~~~~---G-----~w~i~v~~~~~--~-~~~~~~F~Veey 197 (627)
T 3hrz_A 153 S--NSVDL------N--FFWPYNLPDLVSL---G-----TWRIVAKYEHS--P-ENYTAYFDVRKY 197 (627)
T ss_dssp E--EEEBT------T--BCCCEECCSSCCC---E-----EEEEEEEETTC--S-CCEEEEEEECCC
T ss_pred E--EEecc------c--eEEEEECCCCCCC---e-----eEEEEEEECCC--c-eEEEEEEEEeEE
Confidence 1 12221 1 7789999876553 4 46777665311 1 467789999865
No 11
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A
Probab=93.54 E-value=3.5 Score=38.94 Aligned_cols=110 Identities=10% Similarity=0.123 Sum_probs=68.3
Q ss_pred eecCCCcEEEEEEEEeCCCcEEEEeEEEEEEEEEEEEE-EcCCCeEEEEEeEEEecCCcccCCCceEEEEEeCCC-----
Q 022181 41 LFQSQENISGKISIEPVLGKKVEHNGVKIELLGQIEMY-FDRGNFYDFTSLVRELDVPGEIYERKTYPFEFSTVE----- 114 (301)
Q Consensus 41 iY~~Ge~VsG~V~i~~~~~k~~~h~gI~i~~~G~~e~~-~~~~~~~~~~~~~~~l~~~G~L~~g~~~pF~F~l~~----- 114 (301)
.|++||+|.=.|.|++..+| .++.|++.+.=.++.. ++.+ +|-.....+.....+++|.++.=.|.|.+
T Consensus 223 ~Y~pGE~I~V~v~I~N~Ssk--~Vk~Ikv~L~Q~~~v~l~s~~---~y~~~Va~~E~~epV~pgst~~k~~~l~P~l~~n 297 (380)
T 3ugu_A 223 IYYHGEPIPVTVAVTNSTEK--TVKKIKVLVEQVTNVVLYSSD---YYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANN 297 (380)
T ss_dssp EEETTCCEEEEEEEEECSSS--CEEEEEEEEEEEEEECSSSCC---EEEEEEEEEECSCCBCTTEEEEEEEEECCCGGGC
T ss_pred cCcCCCEEEEEEEEEcCCCC--eEeEEEEEEEEEEEEEEecCC---eEEEEEEEeccCCcCCCCCeEEeeEEEEEecccC
Confidence 89999999999999998755 8899999999777665 3333 22222222222224566655444443220
Q ss_pred -----------------CCCCee--------EEeeeEEEEEEEEEEEecC------CCCceEEEEEEEEeCC
Q 022181 115 -----------------MPYETY--------NGVNVRLRYVLKVTVSRGY------GGSVVEYQDFVVRNYT 155 (301)
Q Consensus 115 -----------------~~~eSy--------~G~~~~irY~vkv~i~R~~------~~~~~~~~eF~V~~~~ 155 (301)
.+-+|= +..-+-|.|.|||-+.-+. ..++..+.+|+...+.
T Consensus 298 ~~krglALdG~lk~edtnLASsT~~~~~~~ke~~GI~VsY~VkVkl~v~~lgg~~~~sdv~~elPf~Lmhp~ 369 (380)
T 3ugu_A 298 RERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQ 369 (380)
T ss_dssp SCCTTSCBSSCTTCTTCCBCCCCCCCTTCCGGGGSEEEEEEEEEEEEECCCTTCSSCEEEEEEEEEEEEBCC
T ss_pred CceeeEEecceeccCCCcccceeEecCCCCCcceEEEEEEEEEEEEEEecccCCccccceEEEecccccCCC
Confidence 122221 1112457888888777652 1399999999987653
No 12
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=92.09 E-value=2.4 Score=31.73 Aligned_cols=90 Identities=12% Similarity=0.131 Sum_probs=50.8
Q ss_pred eeeecCCCcEEEEEEEEeCCCcEEEEeEEEEEEEEEEEEEEcCCCeEEEEEeEEEecCCcccCCCceEEEEEeCCCCCCC
Q 022181 39 VPLFQSQENISGKISIEPVLGKKVEHNGVKIELLGQIEMYFDRGNFYDFTSLVRELDVPGEIYERKTYPFEFSTVEMPYE 118 (301)
Q Consensus 39 ~~iY~~Ge~VsG~V~i~~~~~k~~~h~gI~i~~~G~~e~~~~~~~~~~~~~~~~~l~~~G~L~~g~~~pF~F~l~~~~~e 118 (301)
-|+|+|||+|.-++.+...+.++....-+.|++. ..+++.. .+..... ...-.+.++|+||+..+.
T Consensus 10 r~iYrPGetV~~~~~~~~~~~~p~~~~~~~v~l~------dp~g~~v--~~~~~~~------~~~G~~~~~f~Lp~~~~~ 75 (102)
T 2p9r_A 10 KSIYKPGQTVKFRVVSMDENFHPLNELIPLVYIQ------DPKGNRI--AQWQSFQ------LEGGLKQFSFPLSSEPFQ 75 (102)
T ss_dssp CSEECTTCEEEEEEEEECGGGCBCCCEEEEEEEE------CTTSCEE--EEEEEEE------CBTTEEEEEEECCSSCCC
T ss_pred CcccCCCCEEEEEEEEECCCCcCCCCCceEEEEE------CCCCCEE--EEEEeec------CCCCEEEEEEECCCCCCC
Confidence 3599999999999988765444444332333332 2233321 1111111 112246789999876553
Q ss_pred eeEEeeeEEEEEEEEEEEecCCCCceEEEEEEEEeC
Q 022181 119 TYNGVNVRLRYVLKVTVSRGYGGSVVEYQDFVVRNY 154 (301)
Q Consensus 119 Sy~G~~~~irY~vkv~i~R~~~~~~~~~~eF~V~~~ 154 (301)
| .|.|+|.... ....+..|.|..+
T Consensus 76 ---G-----~y~i~~~~~~----~~~~~~~F~Veey 99 (102)
T 2p9r_A 76 ---G-----SYKVVVQKKS----GGRTEHPFTVEEF 99 (102)
T ss_dssp ---E-----EEEEEEECTT----SCEEEEEEEECCC
T ss_pred ---e-----eEEEEEEECC----CCeEEEEEEEEEE
Confidence 4 4666665431 2357788888754
No 13
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=90.75 E-value=14 Score=36.68 Aligned_cols=118 Identities=14% Similarity=0.136 Sum_probs=66.5
Q ss_pred EEEEEecCCCCceeEEeecCCCce---EEeeeecCCCcEEEEEEEEeCCCcEEEEeEEEEEEEEEEEEEEcCCCeEEEEE
Q 022181 13 NISITFADGKNRKQVPLKKENGQT---IMVPLFQSQENISGKISIEPVLGKKVEHNGVKIELLGQIEMYFDRGNFYDFTS 89 (301)
Q Consensus 13 ~i~i~l~~~~~~~~~~~~~~~~~~---~~~~iY~~Ge~VsG~V~i~~~~~k~~~h~gI~i~~~G~~e~~~~~~~~~~~~~ 89 (301)
.+.++..+...++.+.+....+.. ..-|+|+|||+|.=++.+...+.++.. +-+.|++ .-.+++.. .+
T Consensus 85 ~l~~~~~~~~~~~~v~~~~~~~~~fi~TDR~iYrPGqtV~~r~i~~d~~~~p~~-~~v~v~l------~dP~g~~i--~~ 155 (645)
T 2hr0_A 85 TVQATFGTQVVEKVVLVSLQSGYLFIQTDKTIYTPGSTVLYRIFTVNHKLLPVG-RTVMVNI------ENPEGIPV--KQ 155 (645)
T ss_dssp EEEEEETTEEEEEEEEEECCCCEEEEEESCSBCCTTSEEEEEEEEECTTSCBCC-CEEEEEE------ECTTSCEE--EE
T ss_pred EEEEEeCCeEEEEEEEEecCCccEEEEcCCccCCCCCEEEEEEEEECCCCcccC-ceEEEEE------ECCCCCEE--EE
Confidence 455555444345556666555544 356899999999999988766555544 2333333 32333322 11
Q ss_pred eEEEecCCcccCCCceEEEEEeCCCCCCCeeEEeeeEEEEEEEEEEEecCCCCceEEEEEEEEeC
Q 022181 90 LVRELDVPGEIYERKTYPFEFSTVEMPYETYNGVNVRLRYVLKVTVSRGYGGSVVEYQDFVVRNY 154 (301)
Q Consensus 90 ~~~~l~~~G~L~~g~~~pF~F~l~~~~~eSy~G~~~~irY~vkv~i~R~~~~~~~~~~eF~V~~~ 154 (301)
..+..+ -..| .|.++|+||+.... | .|.|+|... ........+.|.|..+
T Consensus 156 --~~~~~~--~~~G-~~~~~f~Lp~~~~~---G-----~w~I~v~~~--~~~~~~~~~~F~VeeY 205 (645)
T 2hr0_A 156 --DSLSSQ--NQLG-VLPLSWDIPELVNM---G-----QWKIRAYYE--NSPQQVFSTEFEVKEY 205 (645)
T ss_dssp --EEEECT--TTTT-EEEEEEECCSSCCC---S-----EEEEEEEET--TCTTSEEEEEEECCCS
T ss_pred --EEeecc--ccCC-eEEEEEECCCcccc---c-----cEEEEEEEC--CCCCceEEEEEEEeec
Confidence 121110 0122 36799999876553 4 466766542 1124567889999865
No 14
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=85.70 E-value=11 Score=37.30 Aligned_cols=126 Identities=14% Similarity=0.267 Sum_probs=70.4
Q ss_pred EeeeecCCCcEEEEEEEEeCCCcEEEEeEEEEEEEEEEEEEEcCCCeEEEEEeEEEecCCcccCCCceEEEEEeCCCCCC
Q 022181 38 MVPLFQSQENISGKISIEPVLGKKVEHNGVKIELLGQIEMYFDRGNFYDFTSLVRELDVPGEIYERKTYPFEFSTVEMPY 117 (301)
Q Consensus 38 ~~~iY~~Ge~VsG~V~i~~~~~k~~~h~gI~i~~~G~~e~~~~~~~~~~~~~~~~~l~~~G~L~~g~~~pF~F~l~~~~~ 117 (301)
.-|+|+|||+|.=++.+...+.++... -+.+. +.-.+++... + ..+. ...| .|.++|+||+...
T Consensus 127 Dr~iYrPGqtV~~r~i~~d~~~~p~~~-~~~v~------i~dp~g~~v~--~--~~~~----~~~G-~~~~~f~Lp~~~~ 190 (656)
T 4fxk_A 127 DQPIYNPGQRVRYRVFALDQKMRPSTD-TITVM------VENSHGLRVR--K--KEVY----MPSS-IFQDDFVIPDISE 190 (656)
T ss_dssp SCSEECTTCEEEEEEEEECSSSSBCCC-CEEEE------EECTTCCEEE--E--EEEC----CTTS-EEEEEEECCTTCC
T ss_pred CCCCcCCCCEEEEEEEEECCccCcCcc-cceEE------EECCCCcEEe--e--eEEe----cCCc-eEEEEecCCCCCC
Confidence 468999999999999887665555433 23332 2223443321 1 1221 2233 3788999997665
Q ss_pred CeeEEeeeEEEEEEEEEEEecCCCCceEEEEEEEEeCCCCCCCCCCceeeeccc-------------ceeEEEEEEeeee
Q 022181 118 ETYNGVNVRLRYVLKVTVSRGYGGSVVEYQDFVVRNYTPPPSINNSIKMEVGIE-------------DCLHIEFEYNKSK 184 (301)
Q Consensus 118 eSy~G~~~~irY~vkv~i~R~~~~~~~~~~eF~V~~~~~~p~~~~pi~~ev~i~-------------~~L~i~f~~~k~~ 184 (301)
. | .|.|+|...-. .....+..|.|..+-.+ ++||.++ +.+.+++ .+.
T Consensus 191 ~---G-----~w~i~v~~~~~--~~~~~s~~F~VeeyvlP-------~feV~i~~~~~~~~~~~~~~~~~~v~v---~a~ 250 (656)
T 4fxk_A 191 P---G-----TWKISARFSDG--LESNSSTQFEVKKYVLP-------NFEVKITPGKPYILTVPGHLDEMQLDI---QAR 250 (656)
T ss_dssp S---E-----EEEEEEEESSC--TTCCCCEEEEECCCCCC-------SEEEEEEESSSSCCEETTEECCCEEEE---EEE
T ss_pred C---c-----CEEEEEEEcCC--CceeEEEEEEEEEEecC-------cEEEEEecCcceeeeccCCCCeEEEEE---EEE
Confidence 4 5 57777765432 12345678999865211 1222211 1122222 456
Q ss_pred EEcCCcEEEEEEEEE
Q 022181 185 YHLKDVIIGKIYFLL 199 (301)
Q Consensus 185 y~l~d~i~G~i~f~~ 199 (301)
|.-|.++.|.+++..
T Consensus 251 Y~~G~PV~G~~~v~~ 265 (656)
T 4fxk_A 251 YIYGKPVQGVAYVRF 265 (656)
T ss_dssp ETTCCCCCSEEEEEE
T ss_pred EccCccEeeEEEEEE
Confidence 777888888777653
No 15
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=84.92 E-value=12 Score=41.91 Aligned_cols=148 Identities=15% Similarity=0.215 Sum_probs=82.8
Q ss_pred eEEEEEecCCCCceeEEeecCCCce---EEeeeecCCCcEEEEEEEEeCCCcEEEEeEEEEEEEEEEEEEEcCCCeEEEE
Q 022181 12 CNISITFADGKNRKQVPLKKENGQT---IMVPLFQSQENISGKISIEPVLGKKVEHNGVKIELLGQIEMYFDRGNFYDFT 88 (301)
Q Consensus 12 ~~i~i~l~~~~~~~~~~~~~~~~~~---~~~~iY~~Ge~VsG~V~i~~~~~k~~~h~gI~i~~~G~~e~~~~~~~~~~~~ 88 (301)
+.+.+...+...++++.+...+|.. ..-|+|.|||+|.-+|.....+.++. .+-+.+.+ ...+++...
T Consensus 104 v~v~~~~~~~~~~k~V~v~~~~~~~FiqTDk~iYrPGqtV~~rvi~~~~~~~p~-~~~~~v~i------~dP~g~~i~-- 174 (1642)
T 3prx_B 104 VVVQVTGPQVRLEKVVLLSYQSSFLFIQTDKGIYTPGSPVLYRVFSMDHNTSKM-NKTVIVEF------QTPEGILVS-- 174 (1642)
T ss_dssp EEEEEEETTEEEEEEEEEECCCCCEEEEESCSEECTTCEEEEEEEECCC------CCCEEEEE------ECSSCCEEE--
T ss_pred EEEEEEeCCceEEEEEEEEcCCCeEEEEcCCCcCCCCCEEEEEEEEEcCCCccc-CceEEEEE------ECCCCCEEE--
Confidence 5566666555556667777777654 46789999999999998876655554 22233222 222333222
Q ss_pred EeEEEecCCcccCCCceEEEEEeCCCCCCCeeEEeeeEEEEEEEEEEEecCCCCceEEEEEEEEeCCCCCCCCCCceeee
Q 022181 89 SLVRELDVPGEIYERKTYPFEFSTVEMPYETYNGVNVRLRYVLKVTVSRGYGGSVVEYQDFVVRNYTPPPSINNSIKMEV 168 (301)
Q Consensus 89 ~~~~~l~~~G~L~~g~~~pF~F~l~~~~~eSy~G~~~~irY~vkv~i~R~~~~~~~~~~eF~V~~~~~~p~~~~pi~~ev 168 (301)
+ ..+. .. +.++|+||+.... | .|.|+|..+.. . ...+..|.|..+-. | ++||
T Consensus 175 ~--~~~~------~~--~~~~f~L~~~~~~---G-----~w~I~v~~~~~--~-~~~~~~F~VeeYvl-P------~FeV 226 (1642)
T 3prx_B 175 S--NSVD------LN--FFWPYNLPDLVSL---G-----TWRIVAKYEHS--P-ENYTAYFDVRKYVL-P------SFEV 226 (1642)
T ss_dssp E--EEEC------TT--CCCEEECCSSCCC---E-----EEEEEEEETTE--E-EEEEEEEEECSCCC-C------SEEE
T ss_pred E--EEec------cc--ceEEEEcCCCCCc---e-----eEEEEEEeCCC--C-cEEEEEEEEEEEec-C------cEEE
Confidence 1 1121 11 6788999866553 4 46776665311 1 46678999986531 1 1222
Q ss_pred cc-----------cceeEEEEEEeeeeEEcCCcEEEEEEEEE
Q 022181 169 GI-----------EDCLHIEFEYNKSKYHLKDVIIGKIYFLL 199 (301)
Q Consensus 169 ~i-----------~~~L~i~f~~~k~~y~l~d~i~G~i~f~~ 199 (301)
.+ .+.+.+++ .+.|.-|.++.|.+.+..
T Consensus 227 ~v~~~~~~~~~~~~~~~~v~V---~ArY~yGkPV~G~v~v~f 265 (1642)
T 3prx_B 227 RLQPSEKFFYIDGNENFHVSI---TARYLYGEEVEGVAFVLF 265 (1642)
T ss_dssp EEEESSSEEETTSCCCEEEEE---EEEETTSCBCCEEEEEEE
T ss_pred EEeccceeEEecCCCeEEEEE---EEEeCCCCceeeeEEEEE
Confidence 21 12222222 467888999999888753
No 16
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=84.80 E-value=20 Score=39.94 Aligned_cols=116 Identities=14% Similarity=0.125 Sum_probs=66.8
Q ss_pred EEEEEecCCCCceeEEeecCCCce---EEeeeecCCCcEEEEEEEEeCCCcEEEEeEEEEEEEEEEEEEEcCCCeEEEEE
Q 022181 13 NISITFADGKNRKQVPLKKENGQT---IMVPLFQSQENISGKISIEPVLGKKVEHNGVKIELLGQIEMYFDRGNFYDFTS 89 (301)
Q Consensus 13 ~i~i~l~~~~~~~~~~~~~~~~~~---~~~~iY~~Ge~VsG~V~i~~~~~k~~~h~gI~i~~~G~~e~~~~~~~~~~~~~ 89 (301)
.+.++...-..++++.++...+.. ..-|+|+|||+|.-++.+...+.++.. +-+.|++. -.+++. +.+
T Consensus 103 ~l~~~~~~f~~~~~v~~~~~~~~~fiqTDR~iYrPGqtV~~r~i~~d~~~~p~~-~~v~v~l~------dP~G~~--i~~ 173 (1676)
T 3cu7_A 103 YLEVVSKHFSKSKRMPITYDNGFLFIHTDKPVYTPDQSVKVRVYSLNDDLKPAK-RETVLTFI------DPEGSE--VDM 173 (1676)
T ss_dssp EEEEEESSCEEEEEECEECCCSEEEEEESCSEECTTCEECEEEEEECTTCSCCC-CCEEEEEE------ETTTEE--CCC
T ss_pred EEEEEecCeeEEEEEEEEcCCCcEEEECCCCccCCCCEEEEEEEEECCCCcccc-cceEEEEE------CCCCCE--EEE
Confidence 455554444456667776666554 467899999999988887765555544 23444332 223321 111
Q ss_pred eEEEecCCcccCCCceEE-EEEeCCCCCCCeeEEeeeEEEEEEEEEEEecCCCCceEEEEEEEEeC
Q 022181 90 LVRELDVPGEIYERKTYP-FEFSTVEMPYETYNGVNVRLRYVLKVTVSRGYGGSVVEYQDFVVRNY 154 (301)
Q Consensus 90 ~~~~l~~~G~L~~g~~~p-F~F~l~~~~~eSy~G~~~~irY~vkv~i~R~~~~~~~~~~eF~V~~~ 154 (301)
. .+. ...| .|. ++|+||+..+. | .|.|+|... +| .+......|.|..+
T Consensus 174 ~--~~~----~~~G-~~~~~~f~Lp~~~~~---G-----~w~I~v~~~-~~-~~~~~s~~F~VeEY 222 (1676)
T 3cu7_A 174 V--EEI----DHIG-IISFPDFKIPSNPRY---G-----MWTIKAKYK-ED-FSTTGTAYFEVKEY 222 (1676)
T ss_dssp E--EEC----CSSS-EEECCCEECCSSCCC---E-----EEEEEEEBS-SS-CCCEEEEEEEECEE
T ss_pred E--eee----cCCC-ceecceeeCCCCccc---c-----ceEEEEEec-CC-CCceEEEEEEEccc
Confidence 0 010 1122 367 79999976553 4 466766543 23 23567889999875
No 17
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=74.60 E-value=1e+02 Score=33.40 Aligned_cols=91 Identities=15% Similarity=0.280 Sum_probs=52.2
Q ss_pred EeeeecCCCcEEEEEEEEeCCCcEEEE-eEEEEEEEEEEEEEEcCCCeEEEEEeEEEecCCcccCCCceEEEEEeCCCCC
Q 022181 38 MVPLFQSQENISGKISIEPVLGKKVEH-NGVKIELLGQIEMYFDRGNFYDFTSLVRELDVPGEIYERKTYPFEFSTVEMP 116 (301)
Q Consensus 38 ~~~iY~~Ge~VsG~V~i~~~~~k~~~h-~gI~i~~~G~~e~~~~~~~~~~~~~~~~~l~~~G~L~~g~~~pF~F~l~~~~ 116 (301)
.-|+|+|||+|.=++.+...+.++..- .-+.|++. -..++.. .+.... ....| .+.++|+||+..
T Consensus 107 Dr~iYrPGqtV~~r~~~~~~~~~p~~~~~~v~v~l~------dp~g~~i--~~~~~~-----~~~~G-~~~~~f~Lp~~~ 172 (1325)
T 2pn5_A 107 DKPVFKPGDTVNFRVIVLDTELKPPARVKSVYVTIR------DPQRNVI--RKWSTA-----KLYAG-VFESDLQIAPTP 172 (1325)
T ss_dssp SCSEECTTCEEEEEEEEEETTSSCCSSCCEEEEEEE------CTTCCEE--EEEEEE-----ECBTT-EEEEEEECCSSC
T ss_pred CCCccCCCCEEEEEEEEecCCccccccCccEEEEEE------CCCCCEE--EEEecc-----cCCCC-eEecceECCCCc
Confidence 457999999999999888765554332 23555543 2233222 111110 01122 367899998665
Q ss_pred CCeeEEeeeEEEEEEEEEEEecCCCCceEEEEEEEEeC
Q 022181 117 YETYNGVNVRLRYVLKVTVSRGYGGSVVEYQDFVVRNY 154 (301)
Q Consensus 117 ~eSy~G~~~~irY~vkv~i~R~~~~~~~~~~eF~V~~~ 154 (301)
.. | .|.|+|... .+......|.|..+
T Consensus 173 ~~---G-----~y~I~~~~~----~~~~~~~~F~VeeY 198 (1325)
T 2pn5_A 173 ML---G-----VWNISVEVE----GEELVSKTFEVKEY 198 (1325)
T ss_dssp CC---E-----EEEEEEEET----TEEEEEEEEEECCS
T ss_pred cc---c-----ceEEEEEeC----CCcEEEEEEEEEec
Confidence 43 4 466766643 12346788999765
No 18
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=67.39 E-value=24 Score=39.28 Aligned_cols=118 Identities=14% Similarity=0.110 Sum_probs=63.1
Q ss_pred EEEEEecCCCCceeEEeecCCCce---EEeeeecCCCcEEEEEEEEeCCCcEEEEeEEEEEEEEEEEEEEcCCCeEEEEE
Q 022181 13 NISITFADGKNRKQVPLKKENGQT---IMVPLFQSQENISGKISIEPVLGKKVEHNGVKIELLGQIEMYFDRGNFYDFTS 89 (301)
Q Consensus 13 ~i~i~l~~~~~~~~~~~~~~~~~~---~~~~iY~~Ge~VsG~V~i~~~~~k~~~h~gI~i~~~G~~e~~~~~~~~~~~~~ 89 (301)
.+.++..+...++.+.+...++.. ..-|+|+|||+|.-++.+...+.++.. +-+.|++. -.+++ .+.+
T Consensus 106 ~l~~~g~~~~~~~~v~~~~~~~~~fiqTDR~iYrPGqtV~~r~i~~d~~~~p~~-~~v~v~l~------dP~g~--~i~~ 176 (1661)
T 2b39_A 106 TVVATFGNVQVEKVVLISLQSGYLFIQTDKTIYTPGSTVLYRVFTVDHKLLPVG-QTVFITIE------TPDGI--PVKR 176 (1661)
T ss_dssp EEEEEETTEEEEEEEEECCCCCEEEEEESCSEECTTSEEEEEEEEECTTSCCCC-CCEEEEEE------ETTEE--EEEE
T ss_pred EEEEEeCCeEEEEEEEEecCCCcEEEecCCCccCCCCEEEEEEEEECCCCcccC-ceEEEEEE------CCCCC--EEee
Confidence 444444333334445555444443 356799999999999888765555543 23444432 22322 2221
Q ss_pred eEEEecCCcccCCCceEEEEEeCCCCCCCeeEEeeeEEEEEEEEEEEecCCCCceEEEEEEEEeC
Q 022181 90 LVRELDVPGEIYERKTYPFEFSTVEMPYETYNGVNVRLRYVLKVTVSRGYGGSVVEYQDFVVRNY 154 (301)
Q Consensus 90 ~~~~l~~~G~L~~g~~~pF~F~l~~~~~eSy~G~~~~irY~vkv~i~R~~~~~~~~~~eF~V~~~ 154 (301)
..+...+ ..| .|.++|+||+..+. | .|.|+|.... ..+......|.|..+
T Consensus 177 --~~~~~t~--~~G-~~~~~f~Lp~~~~~---G-----~w~I~v~~~~--~~~~~~~~~F~VeEY 226 (1661)
T 2b39_A 177 --DSKSSQN--QFG-ILTLSWNIPELVNM---G-----VWKIKAYYED--SPQQVFSAEFEVKEY 226 (1661)
T ss_dssp --EEECTTT--TTS-CCEEEEECCSSCCC---E-----EEEEEEEETT--EEEEEEEEEEEECCC
T ss_pred --eeecccc--cCC-eEeeeeeCCCCccc---c-----ceEEEEEeec--CCCceEEEEEEEEEc
Confidence 2222100 122 26789999876554 4 4666665431 013456788999875
No 19
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=53.05 E-value=2.6e+02 Score=30.68 Aligned_cols=141 Identities=15% Similarity=0.216 Sum_probs=80.6
Q ss_pred CceeEEeecCCCce---EEeeeecCCCcEEEEEEEEeCCCcEEEEeEEEEEEEEEEEEEEcCCCeEEEEEeEEEecCCcc
Q 022181 23 NRKQVPLKKENGQT---IMVPLFQSQENISGKISIEPVLGKKVEHNGVKIELLGQIEMYFDRGNFYDFTSLVRELDVPGE 99 (301)
Q Consensus 23 ~~~~~~~~~~~~~~---~~~~iY~~Ge~VsG~V~i~~~~~k~~~h~gI~i~~~G~~e~~~~~~~~~~~~~~~~~l~~~G~ 99 (301)
.++++.+...++.. ..-|+|.|||+|.=+|..-..+.++....-..|.+ ...+++...=.. .+ .
T Consensus 93 ~~~~v~v~~~~~~~fiqTDK~iY~Pgq~V~~rv~~~~~~~~p~~~~~~~v~i------~dp~g~~i~~~~---~~----~ 159 (1451)
T 4acq_A 93 KRTTVMVKNEDSLVFVQTDKSIYKPGQTVKFRVVSMDENFHPLNELIPLVYI------QDPKGNRIAQWQ---SF----Q 159 (1451)
T ss_dssp EEEEEEEECCCCEEEEEESCSEECTTCEEEEEEEEECTTCCBCCCEEEEEEE------ECTTSCEEEEEE---EE----E
T ss_pred EEEEEEEEccCccEEEECCCCcCCCCCEEEEEEEEECCCCcCccCceeEEEE------ECCCCCEEEEee---ec----c
Confidence 35567777666654 36789999999999987776655665432222333 333444332111 11 1
Q ss_pred cCCCceEEEEEeCCCCCCCeeEEeeeEEEEEEEEEEEecCCCCceEEEEEEEEeCCCCCCCCCCceeeecc---------
Q 022181 100 IYERKTYPFEFSTVEMPYETYNGVNVRLRYVLKVTVSRGYGGSVVEYQDFVVRNYTPPPSINNSIKMEVGI--------- 170 (301)
Q Consensus 100 L~~g~~~pF~F~l~~~~~eSy~G~~~~irY~vkv~i~R~~~~~~~~~~eF~V~~~~~~p~~~~pi~~ev~i--------- 170 (301)
...| .+.-+|+||+.... | .|.|+|... .+...+..|.|..+-. | ++||.+
T Consensus 160 ~~~G-~~~~~f~L~~~~~~---G-----~w~I~~~~~----~~~~~~~~F~V~eYvl-P------~FeV~v~~~~~~~~~ 219 (1451)
T 4acq_A 160 LEGG-LKQFSFPLSSEPFQ---G-----SYKVVVQKK----SGGRTEHPFTVEEFVL-P------KFEVQVTVPKIITIL 219 (1451)
T ss_dssp CBTT-EEEEEEECCSSCCC---E-----EEEEEEECT----TCCEEEEEEEECCCCC-C------SCEEEEECCSEEESS
T ss_pred CCCC-eEEEEeECCCCCCc---e-----eEEEEEEec----CCceEEEEEEEeeeeC-C------cEEEEEeCCceEeec
Confidence 1223 35678888865543 4 467766542 2347789999986521 1 122222
Q ss_pred cceeEEEEEEeeeeEEcCCcEEEEEEEEE
Q 022181 171 EDCLHIEFEYNKSKYHLKDVIIGKIYFLL 199 (301)
Q Consensus 171 ~~~L~i~f~~~k~~y~l~d~i~G~i~f~~ 199 (301)
.+.+.+++ .+.|.-|.++.|++++..
T Consensus 220 ~~~~~~~i---~a~Y~~G~pV~G~~~v~~ 245 (1451)
T 4acq_A 220 EEEMNVSV---CGLYTYGKPVPGHVTVSI 245 (1451)
T ss_dssp CSCCEEEE---EEECSSSCBCCCEEEECC
T ss_pred CCEEEEEE---EEEEcCCCEEcceEEEEE
Confidence 12233322 467888999999888754
No 20
>2djm_A Glucoamylase A; beta sandwich, anti-parallel, strach binding, carbohydrate binding, sugar binding protein; NMR {Rhizopus oryzae} PDB: 2v8l_A* 2v8m_A* 2vq4_A
Probab=51.15 E-value=65 Score=24.58 Aligned_cols=29 Identities=21% Similarity=0.220 Sum_probs=20.4
Q ss_pred CCCceeEEeecCCCceEEeeeecCCCcEEEEEEEEeCC
Q 022181 21 GKNRKQVPLKKENGQTIMVPLFQSQENISGKISIEPVL 58 (301)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~iY~~Ge~VsG~V~i~~~~ 58 (301)
.++++.|.|+. +...+-.+.|+|.|.+-.
T Consensus 3 ~~~~~~V~LE~---------~~~~~~~l~GtV~V~Nla 31 (106)
T 2djm_A 3 IPSSASVQLDS---------YNYDGSTFSGKIYVKNIA 31 (106)
T ss_dssp CCSSSSEEEEE---------EEESSSCEEEEEEECCSS
T ss_pred CCcCCcEEEEE---------EEECCCEEEEEEEEeecC
Confidence 34566666653 344788999999998753
No 21
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=40.77 E-value=2.5e+02 Score=28.45 Aligned_cols=101 Identities=10% Similarity=0.090 Sum_probs=59.8
Q ss_pred CCCcEEEEEEEEeCCCcEEEEeEEEEEEEEEEEEEEcCCCeEEEEEeEEEecCCcccCCCceEEEEEeCCCCCCCeeEEe
Q 022181 44 SQENISGKISIEPVLGKKVEHNGVKIELLGQIEMYFDRGNFYDFTSLVRELDVPGEIYERKTYPFEFSTVEMPYETYNGV 123 (301)
Q Consensus 44 ~Ge~VsG~V~i~~~~~k~~~h~gI~i~~~G~~e~~~~~~~~~~~~~~~~~l~~~G~L~~g~~~pF~F~l~~~~~eSy~G~ 123 (301)
-|+.+.=.|.+++..+ +.+-+++.+.+++. .|+.....++......+ +|.++..=.....++-..|..+-..
T Consensus 494 ~G~df~v~l~~~N~s~---~~~~v~~~l~a~~v-~YtG~~~~~~~~~~~~v----~L~p~~~~~i~~~i~y~~Y~~~L~d 565 (692)
T 1vjj_A 494 VGKEVNLVLLLKNLSR---DTKTVTVNMTAWTI-IYNGTLVHEVWKDSATM----SLDPEEEAEHPIKISYAQYERYLKS 565 (692)
T ss_dssp TTSCEEEEEEEEECSS---SCEEEEEEEEEEEE-CTTCCEEEEEEEEEEEE----EECTTCEEEEEEEECHHHHHTTCCT
T ss_pred CCCCEEEEEEEEECCC---CCEEEEEEEEEEEE-eeCCccccceEEeeEEE----EECCCceEEEEEEECHHHHhhhccc
Confidence 4999999999988753 34678888876664 35655445554443332 2334433223333433344444445
Q ss_pred eeEEEEEEEEEEEecCCCCceEEEEEEEEeC
Q 022181 124 NVRLRYVLKVTVSRGYGGSVVEYQDFVVRNY 154 (301)
Q Consensus 124 ~~~irY~vkv~i~R~~~~~~~~~~eF~V~~~ 154 (301)
+..||-++-|++.-.-. +..+++|.+..+
T Consensus 566 ~~~i~~~a~~~v~et~~--~~~~~di~l~~P 594 (692)
T 1vjj_A 566 DNMIRITAVCKVPDESE--VVVERDIILDNP 594 (692)
T ss_dssp TCEEEEEEEEECTTSCC--EEEEEEEECBCC
T ss_pred CCeEEEEEEEEECCCce--EEEEEEEEEcCC
Confidence 66777777777765442 777788877653
No 22
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=37.11 E-value=99 Score=23.96 Aligned_cols=48 Identities=19% Similarity=0.254 Sum_probs=34.6
Q ss_pred CCCCCCceeeEEEeeCCCcCCCccccccceEEEEEEEEEEEEECCCcEEEE-eeEEEE
Q 022181 238 GAPVRGESIPIRLFLSPYELTPTHRNINNKFSVKYYLNLVLVDEEDRRYFK-QQEITI 294 (301)
Q Consensus 238 G~~~rg~~IPirl~l~~~~ltPt~~~~~~~fsV~y~lnlvli~~~~~~y~k-~~~I~L 294 (301)
+...+|+..-+..-+......|. ++|.+++.|.|++|+..+. ++++++
T Consensus 80 CPl~~G~~~~y~~~lpV~~~~P~---------~~~~v~~~L~d~~~~~l~C~~~~~~I 128 (130)
T 1nep_A 80 CPIEKDKTYNYVNKLPVKNEYPS---------IKVVVEWELTDDKNQRFFCWQIPIEV 128 (130)
T ss_dssp SSBCTTCEEEEEEEEECCTTSCS---------SEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred CcccCCcEEEEEEEeEecccCCC---------ccEEEEEEEEcCCCCEEEEEEEeEEE
Confidence 44445778877777766777887 6789999999999987654 445443
No 23
>2le2_A P56; UDG inhibition, DNA mimicry, hydrolas inhibitor; NMR {Bacillus phage PHI29}
Probab=28.81 E-value=34 Score=22.53 Aligned_cols=27 Identities=22% Similarity=0.640 Sum_probs=22.0
Q ss_pred cceEEEEEEEEEEEEECCCcEEEEeeE
Q 022181 265 NNKFSVKYYLNLVLVDEEDRRYFKQQE 291 (301)
Q Consensus 265 ~~~fsV~y~lnlvli~~~~~~y~k~~~ 291 (301)
.|.|-=+|.+...+-|.||+.|++-++
T Consensus 3 qndf~dsy~~t~ll~dddg~q~~e~h~ 29 (56)
T 2le2_A 3 QNDFVDSYDVTMLLQDDDGKQYYEYHK 29 (56)
T ss_dssp CSSSCSSEEEEEEEECTTSCEEEEEEE
T ss_pred ccccccceeEEEEEEcCCCceeeeeec
Confidence 455666799999999999999998654
No 24
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=25.93 E-value=1.6e+02 Score=22.74 Aligned_cols=30 Identities=13% Similarity=0.179 Sum_probs=15.4
Q ss_pred EEEecCCCCceeEEeecCCCceEEeeeecCCC
Q 022181 15 SITFADGKNRKQVPLKKENGQTIMVPLFQSQE 46 (301)
Q Consensus 15 ~i~l~~~~~~~~~~~~~~~~~~~~~~iY~~Ge 46 (301)
++-||+ +..-..+..+||.+-.+.+-.|||
T Consensus 19 NvYFdG--kV~S~~~~~~dG~~kTlGVm~PGe 48 (111)
T 3hqx_A 19 NVYFGG--LCISHTVQFEDGTKKTLGVILPTE 48 (111)
T ss_dssp EEETTT--TEEEEEEECTTSCEEEEEEECCCS
T ss_pred EEEeCC--eEEEEEEEeCCCCEEEEEEEeccc
Confidence 344444 333344444555555566666666
No 25
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=25.30 E-value=3.2e+02 Score=27.65 Aligned_cols=102 Identities=8% Similarity=-0.041 Sum_probs=61.0
Q ss_pred CCCcEEEEEEEEeCCCcEEEEeEEEEEEEEEEEEEEcCCCeEEE-EEeEEEecCCcccCCCceEEEEEeCCCCCCCeeEE
Q 022181 44 SQENISGKISIEPVLGKKVEHNGVKIELLGQIEMYFDRGNFYDF-TSLVRELDVPGEIYERKTYPFEFSTVEMPYETYNG 122 (301)
Q Consensus 44 ~Ge~VsG~V~i~~~~~k~~~h~gI~i~~~G~~e~~~~~~~~~~~-~~~~~~l~~~G~L~~g~~~pF~F~l~~~~~eSy~G 122 (301)
-|+.+.=.|.+++..+ +.+-+++.+.+++. .|+.....++ ......+ +|+++..=...+.++-..|..+-.
T Consensus 485 ~G~df~v~v~~~N~s~---~~~~v~~~l~a~~v-~YtG~~~~~~~~~~~~~~----~l~p~~~~~v~~~i~y~~Y~~~L~ 556 (687)
T 2q3z_A 485 MGSDFDVFAHITNNTA---EEYVCRLLLCARTV-SYNGILGPECGTKYLLNL----TLEPFSEKSVPLCILYEKYRDCLT 556 (687)
T ss_dssp TTCCEEEEEEEEECSS---SCEEEEEEEEEEEE-CTTCCEEEEEEEEEEEEE----EECTTEEEEEEEEECHHHHTTTCC
T ss_pred CCCCEEEEEEEEECCC---CCEEEEEEEEEEEE-eeCCcccceEeeeeeeEE----EECCCceEEEEEEECHHHHhhhcc
Confidence 4999999999988753 34778888877664 3565555566 4433322 233333322333444344544555
Q ss_pred eeeEEEEEEEEEEEecCCCCceEEEEEEEEeC
Q 022181 123 VNVRLRYVLKVTVSRGYGGSVVEYQDFVVRNY 154 (301)
Q Consensus 123 ~~~~irY~vkv~i~R~~~~~~~~~~eF~V~~~ 154 (301)
.+..||-++-|++.-.- ..+..+++|.+..+
T Consensus 557 d~~~i~~~a~~~v~et~-~~~~~~~di~l~~P 587 (687)
T 2q3z_A 557 ESNLIKVRALLVEPVIN-SYLLAERDLYLENP 587 (687)
T ss_dssp TTCEEEEEEEEEETTTT-EEEEEEEEEECBCC
T ss_pred CCCEEEEEEEEEECCCC-eEEEEEEEEEEeCC
Confidence 56678888877776433 24566777777653
No 26
>2ftc_K 39S ribosomal protein L19, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus}
Probab=22.63 E-value=98 Score=23.37 Aligned_cols=35 Identities=20% Similarity=0.186 Sum_probs=22.0
Q ss_pred eeeecCCCcEEEEEEEEeCCCcEEEEeEEEEEEEE
Q 022181 39 VPLFQSQENISGKISIEPVLGKKVEHNGVKIELLG 73 (301)
Q Consensus 39 ~~iY~~Ge~VsG~V~i~~~~~k~~~h~gI~i~~~G 73 (301)
+|-|.+||+|.-.+.+.-...+--...|+.|...|
T Consensus 1 iP~f~~GDtv~V~~~i~g~k~R~q~F~GvvI~~~~ 35 (98)
T 2ftc_K 1 IPEFYVGSILRVTTADPYASGKISQFLGICIQRSG 35 (98)
T ss_pred CCccCCCCEEEEEEEECCCceEeeeEEEEEEEEEC
Confidence 36799999999888877221112235666665553
No 27
>3njn_A Peptidase; structural genomics, autocatalysis, PSI- protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 1.25A {Shewanella oneidensis} PDB: 3n55_A 2ai4_A 3njm_A 3nji_A 3njf_A 3njg_A 3njk_A 3njl_A 3njj_A 3njh_A
Probab=22.22 E-value=39 Score=26.42 Aligned_cols=34 Identities=12% Similarity=0.377 Sum_probs=25.2
Q ss_pred CCceEEEEEecCCCCceeEEeecCCCceEEeeeec--CCCcEEEEEEEEeC
Q 022181 9 KPACNISITFADGKNRKQVPLKKENGQTIMVPLFQ--SQENISGKISIEPV 57 (301)
Q Consensus 9 ~~~~~i~i~l~~~~~~~~~~~~~~~~~~~~~~iY~--~Ge~VsG~V~i~~~ 57 (301)
.+...+.|.|++++ +.. .|. +|+.++|.|+|+..
T Consensus 11 ~~~f~v~VtL~n~e--p~F-------------~Yt~~~G~~~tG~v~Vt~~ 46 (119)
T 3njn_A 11 AQFIKVNVTLENGE--PVF-------------IYTDANGQVCQGDITVTQA 46 (119)
T ss_dssp EEEEEEEEEEETTE--EEE-------------EEECTTSCEECCCEEESSS
T ss_pred cceEEEEEEEeCCC--cEE-------------EEEccCCCCcCCCEEEeec
Confidence 46778888997654 443 454 79999999999753
No 28
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=21.87 E-value=1.6e+02 Score=20.76 Aligned_cols=25 Identities=20% Similarity=0.264 Sum_probs=22.0
Q ss_pred EEEEEEEEEEECCCcEEEEeeEEEE
Q 022181 270 VKYYLNLVLVDEEDRRYFKQQEITI 294 (301)
Q Consensus 270 V~y~lnlvli~~~~~~y~k~~~I~L 294 (301)
=.|.+.|.+.|.+|.....+..|+.
T Consensus 59 G~Y~v~LtVtd~~G~~~t~~~~V~V 83 (85)
T 2y72_A 59 GTYNVTLKVTDDKGATATESFTIEI 83 (85)
T ss_dssp EEEEEEEEEEETTSCEEEEEEEEEE
T ss_pred eEEEEEEEEEECCCCEEEEEEEEEE
Confidence 3689999999999999998888875
No 29
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=20.85 E-value=6.7e+02 Score=25.48 Aligned_cols=122 Identities=7% Similarity=0.032 Sum_probs=73.1
Q ss_pred CCCcEEEEEEEEeCCCcEEEEeEEEEEEEEEEEEEEcCCCeEEEEEeEEEecCCcccCCCceEEEEEeCCCCCCCeeEEe
Q 022181 44 SQENISGKISIEPVLGKKVEHNGVKIELLGQIEMYFDRGNFYDFTSLVRELDVPGEIYERKTYPFEFSTVEMPYETYNGV 123 (301)
Q Consensus 44 ~Ge~VsG~V~i~~~~~k~~~h~gI~i~~~G~~e~~~~~~~~~~~~~~~~~l~~~G~L~~g~~~pF~F~l~~~~~eSy~G~ 123 (301)
-|+.+.=.|.+++..+ +.+-+++.+.+++. .|+.....++......+ +|.++..=.....++-..|...-..
T Consensus 529 iG~df~v~l~~~N~s~---~~~~v~~~l~a~~v-~YtG~~~~~~~~~~~~~----~L~p~~~~~i~~~i~y~~Y~~~L~d 600 (731)
T 1ex0_A 529 LGKDFKLSITFRNNSH---NRYTITAYLSANIT-FYTGVPKAEFKKETFDV----TLEPLSFKKEAVLIQAGEYMGQLLE 600 (731)
T ss_dssp TTCCEEEEEEEEECSS---SCEEEEEEEEEEEE-CTTSCEEEEEEEEEEEE----EECTTEEEEEEEEECHHHHTTTCCT
T ss_pred CCCCEEEEEEEEECCC---CCEEEEEEEEEEEE-eeCCccccceeEeeEEE----EECCCceEEEEEEECHHHHhhhccC
Confidence 4999999999988753 34678888876664 35655455554443332 2334433223333443344444445
Q ss_pred eeEEEEEEEEEEEecCCCCceEEEEEEEEeCC------CCCCCCCCceeeeccccee
Q 022181 124 NVRLRYVLKVTVSRGYGGSVVEYQDFVVRNYT------PPPSINNSIKMEVGIEDCL 174 (301)
Q Consensus 124 ~~~irY~vkv~i~R~~~~~~~~~~eF~V~~~~------~~p~~~~pi~~ev~i~~~L 174 (301)
+..||-++-|++.-.- ..+..+++|.+..+. ..|....+...++..++||
T Consensus 601 ~~~i~~~a~~~v~et~-~~~~~~~di~l~~P~l~I~v~g~~~v~~~l~v~vsf~NPL 656 (731)
T 1ex0_A 601 QASLHFFVTARINETR-DVLAKQKSTVLTIPEIIIKVRGTQVVGSDMTVTVQFTNPL 656 (731)
T ss_dssp TCEEEEEEEEEETTTC-CEEEEEEEEECBCCCCEEEEEECCBTTSCEEEEEEEECCS
T ss_pred CCEEEEEEEEEECCCC-eEEEEEEEEEEeCCCEEEEeCCCcccCCeEEEEEEEECCC
Confidence 6678888888876543 356778888887653 2344566666666665555
Done!