Query 022183
Match_columns 301
No_of_seqs 243 out of 2003
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 15:17:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022183.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022183hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dmp_A Uracil phosphoribosyltr 100.0 2.5E-66 8.4E-71 462.0 21.9 210 89-301 7-217 (217)
2 1bd3_D Uprtase, uracil phospho 100.0 2.3E-64 7.9E-69 456.1 24.3 217 84-300 26-243 (243)
3 1xtt_A Probable uracil phospho 100.0 1.9E-63 6.5E-68 443.4 23.6 203 92-298 2-216 (216)
4 2ehj_A Uracil phosphoribosyltr 100.0 1.6E-62 5.6E-67 435.2 22.8 206 91-300 1-208 (208)
5 1v9s_A Uracil phosphoribosyltr 100.0 2E-62 6.7E-67 434.7 22.6 205 92-300 2-208 (208)
6 1o5o_A Uracil phosphoribosyltr 100.0 2.3E-61 7.9E-66 431.1 24.7 208 89-300 12-221 (221)
7 2e55_A Uracil phosphoribosyltr 100.0 2E-59 7E-64 415.4 25.5 204 93-301 2-207 (208)
8 1i5e_A Uracil phosphoribosyltr 100.0 6.1E-57 2.1E-61 400.5 23.2 207 90-300 1-209 (209)
9 3ohp_A Hypoxanthine phosphorib 99.3 7.4E-11 2.5E-15 101.4 13.7 119 115-257 10-133 (177)
10 2ywu_A Hypoxanthine-guanine ph 99.3 7.1E-11 2.4E-15 101.9 13.3 120 113-257 13-137 (181)
11 3o7m_A Hypoxanthine phosphorib 99.2 1E-10 3.4E-15 101.4 11.9 119 115-258 14-137 (186)
12 3hvu_A Hypoxanthine phosphorib 99.2 1.5E-10 5.1E-15 101.8 12.9 120 114-258 35-159 (204)
13 3asz_A Uridine kinase; cytidin 99.2 3.1E-11 1E-15 104.6 7.5 84 1-84 125-208 (211)
14 2geb_A Hypoxanthine-guanine ph 99.2 2.6E-10 8.8E-15 98.4 12.2 120 114-258 17-141 (185)
15 1wd5_A Hypothetical protein TT 99.2 2.8E-10 9.7E-15 99.8 12.4 111 162-278 25-180 (208)
16 3ozf_A Hypoxanthine-guanine-xa 99.1 2.3E-10 7.9E-15 103.4 11.2 120 114-258 64-199 (250)
17 1z7g_A HGPRT, HGPRTASE, hypoxa 99.1 2.4E-10 8.2E-15 101.2 10.9 136 111-275 33-182 (217)
18 1yfz_A Hypoxanthine-guanine ph 99.1 8.7E-10 3E-14 96.5 11.1 110 161-276 61-175 (205)
19 1tc1_A Protein (hypoxanthine p 99.0 8.3E-10 2.8E-14 98.0 10.8 124 115-257 13-145 (220)
20 2jbh_A Phosphoribosyltransfera 99.0 3.7E-10 1.3E-14 100.5 8.3 120 113-257 43-176 (225)
21 1hgx_A HGXPRTASE, hypoxanthine 99.0 7.4E-10 2.5E-14 95.2 9.9 135 114-276 15-153 (183)
22 2jeo_A Uridine-cytidine kinase 99.0 3.4E-10 1.1E-14 101.0 8.0 82 1-83 154-235 (245)
23 1vdm_A Purine phosphoribosyltr 99.0 1.5E-09 5.2E-14 90.2 10.7 94 162-257 28-125 (153)
24 1dku_A Protein (phosphoribosyl 99.0 5E-10 1.7E-14 104.6 8.3 134 160-298 167-308 (317)
25 1pzm_A HGPRT, hypoxanthine-gua 99.0 9.4E-10 3.2E-14 97.0 9.2 139 114-276 28-175 (211)
26 1fsg_A HGPRTASE, hypoxanthine- 99.0 1.6E-09 5.4E-14 96.9 9.0 119 114-257 50-184 (233)
27 1w30_A PYRR bifunctional prote 98.9 3.7E-09 1.3E-13 92.4 10.2 124 115-255 18-153 (201)
28 1a7j_A Phosphoribulokinase; tr 98.9 4.5E-10 1.5E-14 103.4 4.3 63 1-64 148-216 (290)
29 1u9y_A RPPK;, ribose-phosphate 98.9 3.3E-09 1.1E-13 97.6 9.7 100 160-265 155-257 (284)
30 3acd_A Hypoxanthine-guanine ph 98.9 6.1E-09 2.1E-13 89.8 10.5 117 115-256 15-136 (181)
31 2aee_A OPRT, oprtase, orotate 98.9 1.2E-09 4.1E-14 96.0 5.9 119 162-287 70-193 (211)
32 3s5j_B Ribose-phosphate pyroph 98.9 5.1E-09 1.7E-13 98.0 10.3 113 160-277 163-277 (326)
33 1ufr_A TT1027, PYR mRNA-bindin 98.9 7.9E-09 2.7E-13 88.5 9.8 114 161-281 33-158 (181)
34 1a3c_A PYRR, pyrimidine operon 98.9 5.2E-09 1.8E-13 89.5 8.4 93 161-255 33-139 (181)
35 3dah_A Ribose-phosphate pyroph 98.9 7.2E-09 2.5E-13 96.8 9.8 113 160-277 166-280 (319)
36 3tqc_A Pantothenate kinase; bi 98.8 1.2E-09 4.2E-14 102.2 4.3 68 1-68 227-313 (321)
37 1sq5_A Pantothenate kinase; P- 98.8 3.4E-09 1.2E-13 98.1 4.6 67 1-67 215-300 (308)
38 2ji4_A Phosphoribosyl pyrophos 98.7 2.9E-08 1E-12 94.8 10.0 114 160-276 191-335 (379)
39 3aez_A Pantothenate kinase; tr 98.7 1.4E-08 4.7E-13 94.5 6.3 68 1-68 218-304 (312)
40 1uj2_A Uridine-cytidine kinase 98.7 1.9E-08 6.5E-13 89.9 6.9 83 1-83 151-233 (252)
41 2xbu_A Hypoxanthine-guanine ph 98.7 7E-08 2.4E-12 85.6 10.1 96 161-256 30-161 (221)
42 3lrt_A Ribose-phosphate pyroph 98.7 2E-07 6.8E-12 85.8 12.5 111 160-276 153-265 (286)
43 3c8u_A Fructokinase; YP_612366 98.6 2.9E-08 1E-12 86.1 4.8 60 1-62 148-207 (208)
44 1y0b_A Xanthine phosphoribosyl 98.5 8.9E-07 3E-11 76.5 12.0 96 163-264 56-171 (197)
45 1zn8_A APRT, adenine phosphori 98.5 8.2E-07 2.8E-11 75.7 11.3 95 162-262 59-169 (180)
46 2dy0_A APRT, adenine phosphori 98.4 8.6E-07 3E-11 76.3 10.1 103 163-273 66-184 (190)
47 2p1z_A Phosphoribosyltransfera 98.4 1.1E-06 3.8E-11 75.2 9.5 104 162-273 65-171 (180)
48 1l1q_A Adenine phosphoribosylt 98.4 1.9E-06 6.3E-11 74.1 11.0 96 163-263 56-169 (186)
49 2yzk_A OPRT, oprtase, orotate 98.4 1.6E-06 5.6E-11 73.9 10.4 101 162-273 60-163 (178)
50 1qb7_A APRT, adenine phosphori 98.4 1.9E-06 6.4E-11 77.0 11.2 114 163-281 74-210 (236)
51 1g2q_A Adenine phosphoribosylt 98.4 1.8E-06 6.3E-11 74.1 10.7 95 162-261 61-170 (187)
52 1dqn_A Guanine phosphoribosylt 98.4 1.1E-07 3.8E-12 84.9 2.4 106 161-273 62-171 (230)
53 1vch_A Phosphoribosyltransfera 98.3 1.4E-06 4.9E-11 73.7 6.9 90 163-257 55-162 (175)
54 2wns_A Orotate phosphoribosylt 98.2 4.8E-06 1.6E-10 72.7 10.0 101 163-273 65-168 (205)
55 3dez_A OPRT, oprtase, orotate 98.2 8.5E-06 2.9E-10 73.2 11.6 94 163-264 103-200 (243)
56 2ga8_A Hypothetical 39.9 kDa p 98.2 4E-07 1.4E-11 86.2 2.9 58 3-62 291-350 (359)
57 2ps1_A Orotate phosphoribosylt 98.2 5E-06 1.7E-10 73.6 9.7 88 163-255 70-165 (226)
58 1odf_A YGR205W, hypothetical 3 98.2 3.6E-07 1.2E-11 84.1 2.1 64 2-66 204-279 (290)
59 1nul_A XPRT, xanthine-guanine 98.2 1.9E-06 6.4E-11 71.7 6.0 86 163-257 31-118 (152)
60 3m3h_A OPRT, oprtase, orotate 98.2 8.5E-06 2.9E-10 72.8 10.3 101 163-273 91-195 (234)
61 3mjd_A Orotate phosphoribosylt 98.1 5.4E-06 1.8E-10 74.0 7.8 86 163-255 84-176 (232)
62 3n2l_A OPRT, oprtase, orotate 98.1 1.5E-05 5.1E-10 71.4 10.6 102 163-273 91-206 (238)
63 1lh0_A OMP synthase; loop clos 98.0 1.2E-05 4.1E-10 70.6 6.7 84 163-256 66-158 (213)
64 1q3t_A Cytidylate kinase; nucl 97.9 1.8E-05 6.1E-10 69.7 6.5 63 1-64 153-218 (236)
65 1o57_A PUR operon repressor; p 97.9 2.6E-05 9E-10 71.7 7.5 89 163-257 133-238 (291)
66 1ecf_A Glutamine phosphoribosy 97.7 5E-05 1.7E-09 74.9 7.9 86 162-251 296-395 (504)
67 1ao0_A Glutamine phosphoribosy 97.6 3.8E-05 1.3E-09 74.9 5.1 84 163-250 276-373 (459)
68 1cke_A CK, MSSA, protein (cyti 97.6 7.9E-05 2.7E-09 64.4 5.7 62 1-63 141-205 (227)
69 4e22_A Cytidylate kinase; P-lo 97.5 0.0001 3.5E-09 65.7 6.1 80 2-81 164-246 (252)
70 3r20_A Cytidylate kinase; stru 97.5 0.00019 6.6E-09 63.8 6.8 77 2-81 147-225 (233)
71 1jjv_A Dephospho-COA kinase; P 97.4 0.00017 5.7E-09 61.6 6.1 71 1-81 124-194 (206)
72 2h92_A Cytidylate kinase; ross 97.4 0.00025 8.6E-09 61.0 6.8 63 1-64 136-201 (219)
73 3qw4_B UMP synthase; N-termina 97.3 0.00053 1.8E-08 66.7 8.8 101 162-272 318-421 (453)
74 2f6r_A COA synthase, bifunctio 97.3 0.00037 1.3E-08 63.2 6.9 54 1-64 200-253 (281)
75 3lw7_A Adenylate kinase relate 97.2 0.00034 1.2E-08 57.0 5.4 73 2-78 103-175 (179)
76 4i1u_A Dephospho-COA kinase; s 97.1 0.00099 3.4E-08 58.3 7.2 53 1-63 132-184 (210)
77 2qt1_A Nicotinamide riboside k 97.0 0.00025 8.7E-09 60.6 2.5 71 1-80 130-202 (207)
78 3ake_A Cytidylate kinase; CMP 96.9 0.0015 5.1E-08 55.2 6.6 56 1-64 136-192 (208)
79 1vht_A Dephospho-COA kinase; s 96.6 0.0049 1.7E-07 52.8 7.5 70 1-80 126-195 (218)
80 2if2_A Dephospho-COA kinase; a 96.6 0.0034 1.2E-07 53.2 6.3 67 1-82 124-190 (204)
81 2jaq_A Deoxyguanosine kinase; 96.6 0.0024 8.1E-08 53.6 5.1 71 1-80 125-197 (205)
82 2vp4_A Deoxynucleoside kinase; 96.5 0.0013 4.5E-08 57.4 3.2 60 1-65 147-210 (230)
83 1uf9_A TT1252 protein; P-loop, 96.4 0.0038 1.3E-07 52.5 5.5 54 1-64 125-178 (203)
84 2grj_A Dephospho-COA kinase; T 96.3 0.0041 1.4E-07 53.3 5.3 43 1-65 130-172 (192)
85 2ocp_A DGK, deoxyguanosine kin 95.6 0.011 3.9E-07 51.5 4.7 76 1-81 150-238 (241)
86 2pt5_A Shikimate kinase, SK; a 95.3 0.0096 3.3E-07 48.5 3.3 71 2-87 94-167 (168)
87 1ukz_A Uridylate kinase; trans 95.1 0.032 1.1E-06 46.9 5.9 57 1-63 121-185 (203)
88 2pbr_A DTMP kinase, thymidylat 95.1 0.028 9.5E-07 46.5 5.4 53 1-63 123-175 (195)
89 3t61_A Gluconokinase; PSI-biol 94.6 0.085 2.9E-06 44.4 7.2 70 2-85 112-181 (202)
90 1tev_A UMP-CMP kinase; ploop, 94.5 0.07 2.4E-06 43.9 6.3 71 2-80 115-191 (196)
91 1p5z_B DCK, deoxycytidine kina 94.4 0.094 3.2E-06 46.2 7.5 74 2-79 176-258 (263)
92 2plr_A DTMP kinase, probable t 94.2 0.12 4.2E-06 43.1 7.5 73 2-78 123-206 (213)
93 3a00_A Guanylate kinase, GMP k 94.2 0.032 1.1E-06 46.7 3.7 68 3-78 116-183 (186)
94 3fdi_A Uncharacterized protein 94.1 0.053 1.8E-06 46.4 4.9 73 2-78 118-197 (201)
95 3kb2_A SPBC2 prophage-derived 94.1 0.06 2.1E-06 43.5 5.0 70 2-79 96-166 (173)
96 2qor_A Guanylate kinase; phosp 94.0 0.099 3.4E-06 44.2 6.5 70 3-81 128-198 (204)
97 1qf9_A UMP/CMP kinase, protein 93.6 0.12 4.2E-06 42.3 6.2 57 2-63 112-175 (194)
98 2z0h_A DTMP kinase, thymidylat 93.5 0.055 1.9E-06 44.9 3.9 68 2-78 123-190 (197)
99 3d3q_A TRNA delta(2)-isopenten 93.5 0.024 8.1E-07 53.1 1.7 46 5-54 118-166 (340)
100 3vaa_A Shikimate kinase, SK; s 93.5 0.26 8.8E-06 41.4 8.1 72 2-81 119-197 (199)
101 1zuh_A Shikimate kinase; alpha 93.4 0.058 2E-06 43.9 3.7 66 2-79 98-165 (168)
102 3hdt_A Putative kinase; struct 93.3 0.13 4.4E-06 44.9 6.1 72 3-78 139-217 (223)
103 2bwj_A Adenylate kinase 5; pho 93.2 0.079 2.7E-06 44.0 4.3 23 1-23 116-138 (199)
104 2cdn_A Adenylate kinase; phosp 93.1 0.12 4.2E-06 43.3 5.4 68 2-81 128-199 (201)
105 1via_A Shikimate kinase; struc 92.8 0.12 4.1E-06 42.4 4.9 70 2-82 94-165 (175)
106 2rhm_A Putative kinase; P-loop 92.7 0.08 2.7E-06 43.7 3.6 78 2-83 106-188 (193)
107 2iyv_A Shikimate kinase, SK; t 92.5 0.12 4.3E-06 42.5 4.6 71 2-82 95-167 (184)
108 1kgd_A CASK, peripheral plasma 92.3 0.094 3.2E-06 43.5 3.6 60 3-79 119-178 (180)
109 3ld9_A DTMP kinase, thymidylat 92.3 0.084 2.9E-06 46.3 3.4 73 1-82 146-218 (223)
110 3lv8_A DTMP kinase, thymidylat 92.2 0.085 2.9E-06 46.6 3.4 77 1-82 155-231 (236)
111 3trf_A Shikimate kinase, SK; a 92.1 0.11 3.7E-06 42.8 3.7 69 3-80 100-175 (185)
112 4tmk_A Protein (thymidylate ki 92.0 0.13 4.4E-06 44.6 4.3 75 2-81 134-208 (213)
113 2wwf_A Thymidilate kinase, put 91.9 0.19 6.6E-06 42.1 5.2 68 1-82 131-198 (212)
114 1nks_A Adenylate kinase; therm 91.7 0.26 8.8E-06 40.3 5.7 71 2-79 117-191 (194)
115 1kht_A Adenylate kinase; phosp 91.4 0.28 9.6E-06 40.1 5.6 26 2-29 116-141 (192)
116 3hjn_A DTMP kinase, thymidylat 91.1 0.13 4.3E-06 43.9 3.1 70 2-80 123-192 (197)
117 1zak_A Adenylate kinase; ATP:A 91.1 0.26 9E-06 42.0 5.2 21 2-22 110-130 (222)
118 2c95_A Adenylate kinase 1; tra 91.0 0.2 7E-06 41.3 4.3 22 2-23 114-135 (196)
119 4eun_A Thermoresistant glucoki 90.8 0.3 1E-05 41.0 5.3 66 3-82 127-192 (200)
120 3nwj_A ATSK2; P loop, shikimat 90.7 0.34 1.2E-05 43.0 5.7 73 2-83 143-240 (250)
121 1knq_A Gluconate kinase; ALFA/ 90.6 0.64 2.2E-05 37.7 7.0 65 3-81 106-171 (175)
122 1nn5_A Similar to deoxythymidy 90.5 0.41 1.4E-05 40.0 5.8 72 2-81 131-202 (215)
123 3a4m_A L-seryl-tRNA(SEC) kinas 90.5 0.59 2E-05 41.1 7.1 68 2-82 101-172 (260)
124 4hlc_A DTMP kinase, thymidylat 90.3 0.5 1.7E-05 40.4 6.3 78 2-82 126-203 (205)
125 4eaq_A DTMP kinase, thymidylat 90.0 0.49 1.7E-05 41.1 6.0 77 2-81 150-226 (229)
126 1e6c_A Shikimate kinase; phosp 90.0 0.37 1.3E-05 38.9 4.9 71 2-81 95-168 (173)
127 3iij_A Coilin-interacting nucl 90.0 0.54 1.9E-05 38.4 6.0 72 2-80 98-174 (180)
128 3tr0_A Guanylate kinase, GMP k 89.5 0.37 1.3E-05 40.0 4.7 66 3-78 120-185 (205)
129 1kag_A SKI, shikimate kinase I 89.5 0.19 6.4E-06 40.8 2.7 68 2-80 98-169 (173)
130 1rz3_A Hypothetical protein rb 88.8 0.08 2.7E-06 44.8 0.0 33 31-63 166-200 (201)
131 3v9p_A DTMP kinase, thymidylat 88.8 0.27 9.1E-06 43.1 3.4 59 2-64 153-211 (227)
132 3dl0_A Adenylate kinase; phosp 88.7 0.72 2.4E-05 38.8 6.0 21 1-21 107-127 (216)
133 4edh_A DTMP kinase, thymidylat 88.6 0.25 8.7E-06 42.6 3.1 76 2-81 133-208 (213)
134 1y63_A LMAJ004144AAA protein; 86.9 1.2 4.2E-05 36.6 6.3 21 1-21 101-121 (184)
135 1zd8_A GTP:AMP phosphotransfer 86.8 0.62 2.1E-05 39.8 4.5 22 1-22 108-129 (227)
136 3tmk_A Thymidylate kinase; pho 85.8 0.5 1.7E-05 41.0 3.3 74 2-82 127-205 (216)
137 3cm0_A Adenylate kinase; ATP-b 85.5 0.75 2.6E-05 37.5 4.2 72 2-80 107-183 (186)
138 3fb4_A Adenylate kinase; psych 85.2 0.8 2.7E-05 38.5 4.3 21 1-21 107-127 (216)
139 2v54_A DTMP kinase, thymidylat 82.7 1.2 4E-05 36.8 4.3 71 1-81 122-192 (204)
140 1gtv_A TMK, thymidylate kinase 82.0 0.24 8.1E-06 41.6 -0.4 73 1-78 133-208 (214)
141 1ak2_A Adenylate kinase isoenz 81.3 3 0.0001 35.6 6.5 21 2-22 124-144 (233)
142 2vli_A Antibiotic resistance p 79.6 3.9 0.00013 32.9 6.3 18 5-22 109-126 (183)
143 1e4v_A Adenylate kinase; trans 78.2 3 0.0001 35.0 5.4 23 1-23 103-125 (214)
144 3lnc_A Guanylate kinase, GMP k 77.6 1.8 6.3E-05 36.8 3.9 52 3-63 142-193 (231)
145 1m7g_A Adenylylsulfate kinase; 77.4 1.5 5E-05 37.0 3.1 72 2-85 133-204 (211)
146 2pez_A Bifunctional 3'-phospho 75.8 2.9 0.0001 33.9 4.5 18 2-19 106-123 (179)
147 1aky_A Adenylate kinase; ATP:A 74.6 6.1 0.00021 33.1 6.4 22 1-22 112-133 (220)
148 2yvu_A Probable adenylyl-sulfa 72.7 6.1 0.00021 32.1 5.8 68 2-80 114-184 (186)
149 3tlx_A Adenylate kinase 2; str 67.9 6 0.00021 34.1 4.9 23 1-23 136-158 (243)
150 1z6g_A Guanylate kinase; struc 67.7 11 0.00036 31.9 6.4 69 3-79 139-207 (218)
151 2xb4_A Adenylate kinase; ATP-b 66.5 6.3 0.00022 33.4 4.7 22 1-22 106-127 (223)
152 3umf_A Adenylate kinase; rossm 64.1 6.2 0.00021 34.0 4.1 78 1-86 133-216 (217)
153 2j41_A Guanylate kinase; GMP, 62.9 7.9 0.00027 31.6 4.5 65 3-82 120-185 (207)
154 1p6x_A Thymidine kinase; P-loo 60.9 2.5 8.5E-05 39.2 1.0 47 2-53 159-205 (334)
155 1ex7_A Guanylate kinase; subst 60.7 17 0.00057 30.4 6.1 67 3-77 116-182 (186)
156 1ltq_A Polynucleotide kinase; 57.0 11 0.00036 33.2 4.5 39 3-43 108-146 (301)
157 3uie_A Adenylyl-sulfate kinase 56.4 15 0.00052 30.2 5.2 16 3-18 125-140 (200)
158 3tau_A Guanylate kinase, GMP k 52.4 9.5 0.00032 31.9 3.2 65 3-78 122-187 (208)
159 3be4_A Adenylate kinase; malar 48.8 32 0.0011 28.6 6.1 22 2-23 113-134 (217)
160 1ly1_A Polynucleotide kinase; 46.6 15 0.00051 29.0 3.4 37 3-41 108-144 (181)
161 1x6v_B Bifunctional 3'-phospho 43.8 5.5 0.00019 40.1 0.4 68 2-79 153-222 (630)
162 2jfz_A Glutamate racemase; cel 43.3 32 0.0011 29.9 5.4 81 170-272 11-91 (255)
163 2gks_A Bifunctional SAT/APS ki 42.3 12 0.00041 36.8 2.6 68 3-82 472-539 (546)
164 1osn_A Thymidine kinase, VZV-T 41.9 7.3 0.00025 36.1 0.9 44 2-50 168-211 (341)
165 1qhx_A CPT, protein (chloramph 41.7 24 0.00081 28.0 3.9 19 3-21 115-133 (178)
166 3dah_A Ribose-phosphate pyroph 39.8 1.3E+02 0.0046 27.2 9.1 84 162-252 8-95 (319)
167 3sr0_A Adenylate kinase; phosp 38.2 36 0.0012 28.6 4.7 23 1-23 104-126 (206)
168 3cr8_A Sulfate adenylyltranfer 37.5 29 0.001 34.1 4.5 67 3-78 471-538 (552)
169 3ch4_B Pmkase, phosphomevalona 35.6 47 0.0016 28.2 5.0 63 4-82 130-195 (202)
170 1m8p_A Sulfate adenylyltransfe 34.7 45 0.0016 32.8 5.4 16 3-18 498-513 (573)
171 1dek_A Deoxynucleoside monopho 34.1 57 0.0019 28.3 5.4 22 2-23 169-190 (241)
172 1u9y_A RPPK;, ribose-phosphate 33.6 2.4E+02 0.0082 24.8 9.7 78 169-252 7-87 (284)
173 1sby_A Alcohol dehydrogenase; 33.2 1.7E+02 0.0058 24.4 8.3 56 211-271 3-58 (254)
174 3tvt_A Disks large 1 tumor sup 32.6 72 0.0025 28.5 6.0 66 3-80 212-277 (292)
175 4gud_A Imidazole glycerol phos 32.4 74 0.0025 26.2 5.7 52 214-294 3-54 (211)
176 3hix_A ALR3790 protein; rhodan 32.3 1.1E+02 0.0037 22.3 6.1 46 212-267 51-96 (106)
177 3hnn_A Putative diflavin flavo 31.6 81 0.0028 26.9 6.0 56 215-275 52-113 (262)
178 3ix9_A Dihydrofolate reductase 31.4 1.2E+02 0.0042 25.2 6.9 53 227-299 101-153 (190)
179 1s96_A Guanylate kinase, GMP k 31.0 98 0.0034 26.0 6.3 65 3-78 131-196 (219)
180 3s5j_B Ribose-phosphate pyroph 30.8 2.8E+02 0.0094 25.2 9.7 79 168-252 9-91 (326)
181 4dey_A Voltage-dependent L-typ 30.6 46 0.0016 30.7 4.4 72 3-83 253-324 (337)
182 3gmt_A Adenylate kinase; ssgci 28.8 33 0.0011 29.8 2.9 23 1-23 111-133 (230)
183 2jtq_A Phage shock protein E; 28.7 92 0.0031 21.5 4.9 32 212-248 40-71 (85)
184 2gcu_A Putative hydroxyacylglu 27.8 1.6E+02 0.0055 24.9 7.2 56 213-276 27-88 (245)
185 2bbw_A Adenylate kinase 4, AK4 27.7 83 0.0028 26.5 5.3 22 1-22 128-149 (246)
186 1gmx_A GLPE protein; transfera 27.5 86 0.0029 22.8 4.8 45 212-266 57-101 (108)
187 1qh5_A Glyoxalase II, protein 27.4 1.3E+02 0.0043 26.0 6.5 52 213-274 22-79 (260)
188 3t4e_A Quinate/shikimate dehyd 26.3 87 0.003 28.2 5.4 35 210-250 145-179 (312)
189 1vp8_A Hypothetical protein AF 25.5 1.9E+02 0.0066 24.5 6.9 47 224-274 27-73 (201)
190 3tum_A Shikimate dehydrogenase 24.8 1.1E+02 0.0039 26.8 5.7 55 210-270 122-178 (269)
191 1h7n_A 5-aminolaevulinic acid 24.2 1.8E+02 0.0061 26.8 6.9 51 226-278 68-137 (342)
192 3t7y_A YOP proteins translocat 23.5 79 0.0027 23.7 3.8 67 54-127 7-91 (97)
193 3eod_A Protein HNR; response r 23.5 1.3E+02 0.0044 21.6 5.2 17 211-227 5-21 (130)
194 1kjw_A Postsynaptic density pr 23.3 1.2E+02 0.0043 26.8 5.8 66 3-80 217-282 (295)
195 1e2k_A Thymidine kinase; trans 22.9 27 0.00094 32.0 1.3 46 2-52 156-201 (331)
196 2gzm_A Glutamate racemase; enz 22.3 68 0.0023 28.0 3.7 82 169-272 13-94 (267)
197 3ilm_A ALR3790 protein; rhodan 22.0 1.2E+02 0.0041 23.5 4.9 43 212-264 55-97 (141)
198 3jyo_A Quinate/shikimate dehyd 21.6 1.1E+02 0.0038 27.0 5.1 35 210-250 124-158 (283)
199 3m95_A Autophagy related prote 21.5 91 0.0031 24.5 3.9 32 257-288 25-61 (125)
200 4gmk_A Ribose-5-phosphate isom 21.2 88 0.003 27.2 4.1 69 222-292 26-103 (228)
201 1boo_A Protein (N-4 cytosine-s 20.1 45 0.0015 30.0 2.1 38 216-262 254-291 (323)
202 2jlj_A YSCU, YOP proteins tran 20.1 88 0.003 25.2 3.6 68 54-128 45-130 (144)
203 1eg2_A Modification methylase 20.1 48 0.0016 29.9 2.3 68 216-298 244-314 (319)
204 3rqi_A Response regulator prot 20.0 1.5E+02 0.0052 23.2 5.2 15 211-225 5-19 (184)
205 2qed_A Hydroxyacylglutathione 20.0 2.7E+02 0.0093 23.6 7.2 54 213-276 28-87 (258)
No 1
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=100.00 E-value=2.5e-66 Score=462.03 Aligned_cols=210 Identities=32% Similarity=0.542 Sum_probs=200.8
Q ss_pred CCCceeeccchHHHHHHhhhhhcCCCChhhhHhhHHHHHHHHHHHHhCCCCCeeeEeeCCCCceeeeeeec-cceeEEEe
Q 022183 89 IYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSI 167 (301)
Q Consensus 89 ~~~~v~vl~~~~~~~~~lt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~V~tp~g~~~~g~~~~-~~i~~V~I 167 (301)
.++|||+++|| +++|++|+|||++|++.+||++++||++||+|||++++|+++++|+||+| .+.|..+. +++|+|||
T Consensus 7 ~~~~v~v~~hp-~i~~~lt~lRd~~t~~~~Fr~~~~rl~~lL~yEa~~~lp~~~~~V~TP~g-~~~g~~~~~~~i~~V~I 84 (217)
T 3dmp_A 7 RFPNLFILDHP-LIQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRNLPITTKRVETPLV-EIDAPVIAGKKLAIVPV 84 (217)
T ss_dssp TCTTEEEECCH-HHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEECSSC-EEEEEEECGGGEEEEEE
T ss_pred CCCCeEecCCH-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhcCCceeEEEECCCe-EEEEEEecCCcEEEEEe
Confidence 46899999995 79999999999999999999999999999999999999999999999999 58899886 89999999
Q ss_pred cccchHHHHHHHHhccCCeeeeEEEEecCCCCceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEE
Q 022183 168 VRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHII 247 (301)
Q Consensus 168 lRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~ 247 (301)
+|+|++|++++.+++|++++|+|+++||+.|.+..||.++| ++++++|||+|||+|||+|+.+|++.|+++|+|+++|+
T Consensus 85 lRaG~~m~~~l~~~ip~a~vg~i~~~Rd~~t~p~~~~~~lP-~i~~~~VilvD~~laTG~T~~~ai~~L~~~G~pe~~I~ 163 (217)
T 3dmp_A 85 LRAGVGMSDGLLELIPSARVGHIGVYRADDHRPVEYLVRLP-DLEDRIFILCDPMVATGYSAAHAIDVLKRRGVPGERLM 163 (217)
T ss_dssp ETTTHHHHHHHHHHCTTSEECEEECSCCCSSSCCCSEEECC-CCTTCEEEEECSEESSSHHHHHHHHHHHTTTCCGGGEE
T ss_pred cccchHHHHHHHHhCcCCceeEEEEEECCCCCcEEEeecCC-CCCCCEEEEEcCcccccHHHHHHHHHHHHcCCCcCeEE
Confidence 99999999999999999999999999999887778899999 99999999999999999999999999999999889999
Q ss_pred EEEEEeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchhhhccCCCC
Q 022183 248 FLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD 301 (301)
Q Consensus 248 ~~~~vas~~gl~~l~~~~p~v~i~t~~iD~~l~~~~~ivPGlGd~GdR~fgt~~ 301 (301)
++|++++++|++++.++||+|+||||+||++||++|||+|||||||||||||+.
T Consensus 164 ~~~~vaa~egl~~l~~~~P~v~i~ta~iD~~Lne~~yIvPGlGDaGDR~fgt~~ 217 (217)
T 3dmp_A 164 FLALVAAPEGVQVFQDAHPDVKLYVASLDSHLDDHAYIVPGLGDAGDRLFGTKN 217 (217)
T ss_dssp EECSEECHHHHHHHHHHCTTCEEEESEECCEECTTSCEESSCSCHHHHHHC---
T ss_pred EEEEEeCHHHHHHHHHHCCCCEEEEEEecCCcCCCCCccCCCCCHHHhhcCCCC
Confidence 999999999999999999999999999999999999999999999999999973
No 2
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=100.00 E-value=2.3e-64 Score=456.07 Aligned_cols=217 Identities=53% Similarity=0.966 Sum_probs=207.9
Q ss_pred cccccCCCceeeccchHHHHHHhhhhhcCCCChhhhHhhHHHHHHHHHHHHhCCCCCeeeEeeCCCCceeeeeeecccee
Q 022183 84 HDLCKIYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLC 163 (301)
Q Consensus 84 ~~l~~~~~~v~vl~~~~~~~~~lt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~V~tp~g~~~~g~~~~~~i~ 163 (301)
+.+|+.++||+++.++|+++|++|+|||++|++.+||++++||++||+|||++++|+++++|+||+|.++.|..+.+++|
T Consensus 26 ~~~~~~~~~v~~~~~hp~i~~~lt~lRd~~t~~~~Fr~~~~rl~~ll~yEa~~~lp~~~~~v~TP~g~~~~g~~~~~~l~ 105 (243)
T 1bd3_D 26 QDIITRFPNVVLMKQTAQLRAMMTIIRDKETPKEEFVFYADRLIRLLIEEALNELPFQKKEVTTPLDVSYHGVSFYSKIC 105 (243)
T ss_dssp HHHHHHCTTEEECCCCHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTSCEEEEEEECTTSCEEEEEEECCCEE
T ss_pred cccccCCCcEEEecCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCceeEEEECCCcceEeeeeccCcEE
Confidence 34566788999995556899999999999999999999999999999999999999999999999998888988888999
Q ss_pred EEEecccchHHHHHHHHhccCCeeeeEEEEecCCCC-ceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCC
Q 022183 164 GVSIVRSGESMENALRACCKGIKIGKILIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVP 242 (301)
Q Consensus 164 ~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~~-~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~ 242 (301)
+|||||+|++|++++.+++|++++|||+++||++|+ +.+||.++|.++++++|||+|||+|||+|+.+|++.|+++|++
T Consensus 106 ~V~ILRaG~~m~~~l~~~ip~a~vg~I~~~Rd~~t~~~~~~~~~lp~di~~r~VilvDdmlaTG~T~~~ai~~L~~~G~~ 185 (243)
T 1bd3_D 106 GVSIVRAGESMESGLRAVCRGVRIGKILIQRDETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVK 185 (243)
T ss_dssp EEEEETTTHHHHHHHHHHSTTCCEEEEEEEECSSSCCEEEEEEECCTTGGGSEEEEECSEESSCHHHHHHHHHHHHHTCC
T ss_pred EEEEEcchHHHHHHHHHhCCcCeeeeEEEEEcCCCCCeEEEeccCCcccCCCEEEEECCccccHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999988 7889999999999999999999999999999999999999997
Q ss_pred CccEEEEEEEeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchhhhccCCC
Q 022183 243 ESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 300 (301)
Q Consensus 243 ~~~I~~~~~vas~~gl~~l~~~~p~v~i~t~~iD~~l~~~~~ivPGlGd~GdR~fgt~ 300 (301)
+++|+++|++++++|++++.++||+++|||++||++||++|||+|||||||||||||+
T Consensus 186 p~~I~~~~lvaap~g~~~l~~~~p~v~I~ta~ID~~Lne~~yIvPGlGDaGDR~fGt~ 243 (243)
T 1bd3_D 186 EERIIFVNILAAPQGIERVFKEYPKVRMVTAAVDICLNSRYYIVPGIGDFGDRYFGTM 243 (243)
T ss_dssp GGGEEEEEEEECHHHHHHHHHHCTTSEEEEEEECSEECTTCCEESCCSCHHHHHHTCC
T ss_pred cceEEEEEEEeCHHHHHHHHHHCCCCEEEEEEecCCcCCCceecCCCCcHHHhhcCCC
Confidence 7999999999999999999999999999999999999999999999999999999985
No 3
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=100.00 E-value=1.9e-63 Score=443.35 Aligned_cols=203 Identities=27% Similarity=0.423 Sum_probs=194.6
Q ss_pred ceeeccchHHHHHHhhhhhcCCCChhhhHhhHHHHHHHHHHHHhCCCCCeeeEeeCCCCceeeeeee-c-cceeEEEecc
Q 022183 92 NVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDF-C-KKLCGVSIVR 169 (301)
Q Consensus 92 ~v~vl~~~~~~~~~lt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~V~tp~g~~~~g~~~-~-~~i~~V~IlR 169 (301)
|+|+++|| +++|++|+|||++|++.+||++++||++||+|||++++|+++++|+||+|.++.|..+ . +++|+|||+|
T Consensus 2 ~v~v~~hp-~~~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~yEa~~~l~~~~~~v~TP~g~~~~~~~~~~~~~i~iV~IlR 80 (216)
T 1xtt_A 2 PLYVIDKP-ITLHILTQLRDKYTDQINFRKNLVRLGRILGYEISNTLDYEIVEVETPLGVKTKGVDITDLNNIVIINILR 80 (216)
T ss_dssp CEEECCCH-HHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTSCCEEEEEECTTSCEEEEEECGGGGSEEEEEEET
T ss_pred ceEEcCCH-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhhCCceeEEEECCCccEecceEecCCCcEEEEeecC
Confidence 79999986 7999999999999999999999999999999999999999999999999987777544 4 7999999999
Q ss_pred cchHHHHHHHHhccCCeeeeEEEEecCCC-------C-ceeEeecCCCCCCCc--EEEEEcccccchHHHHHHHHHHHHc
Q 022183 170 SGESMENALRACCKGIKIGKILIHRDGDN-------G-KQLIYEKLPNDISER--HVLLLDPVLATGNSANQAIQLLIEK 239 (301)
Q Consensus 170 aG~~m~~~l~~~~p~a~~G~i~i~Rd~~~-------~-~~~~y~~lP~~i~~~--~Vil~Dp~laTG~t~~~ai~~L~~~ 239 (301)
||++|++++++++|++++|+|+++||+.+ . +..||.++| +++++ +|||+|||+|||+|+.+|++.|++
T Consensus 81 aG~~m~~gl~~~lp~a~vg~I~~~Rd~~t~~~~~~~~~p~~~y~klP-~i~~~~~~VilvDp~laTG~T~~~ai~~L~~- 158 (216)
T 1xtt_A 81 AAVPLVEGLLKAFPKARQGVIGASRVEVDGKEVPKDMDVYIYYKKIP-DIRAKVDNVIIADPMIATASTMLKVLEEVVK- 158 (216)
T ss_dssp TTHHHHHHHHHHCTTCEEEEEEEEECCCCCSSCCSCCCEEEEEEECC-CCCTTTCEEEEECSEESSSHHHHHHHHHHGG-
T ss_pred CcHHHHHHHHHHcccCccceEEEEECCCcccccccccCceEeeccCC-CccCCcceEEEEcCCccchHHHHHHHHHHHh-
Confidence 99999999999999999999999999987 4 678999999 99999 999999999999999999999999
Q ss_pred CCCCccEEEEEEEeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchhhhccC
Q 022183 240 GVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFG 298 (301)
Q Consensus 240 g~~~~~I~~~~~vas~~gl~~l~~~~p~v~i~t~~iD~~l~~~~~ivPGlGd~GdR~fg 298 (301)
|+| ++|+++|++|+++|++++.++||+|+|||++||++||++|||+||||||||||||
T Consensus 159 G~p-~~I~~~~~vaa~~gl~~l~~~~P~v~I~ta~iD~~Lne~~yIvPGlGDaGDR~fg 216 (216)
T 1xtt_A 159 ANP-KRIYIVSIISSEYGVNKILSKYPFIYLFTVAIDPELNNKGYILPGLGDAGDRAFG 216 (216)
T ss_dssp GCC-SEEEEECSEEEHHHHHHHHHHCTTSEEEESEEESEECTTSCEESSCSCHHHHHHC
T ss_pred CCC-CeEEEEEEecCHHHHHHHHHHCCCcEEEEEEecCCcCCCCCccCCCCChHhhccC
Confidence 987 8999999999999999999999999999999999999999999999999999998
No 4
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=100.00 E-value=1.6e-62 Score=435.20 Aligned_cols=206 Identities=30% Similarity=0.430 Sum_probs=198.9
Q ss_pred CceeeccchHHHHHHhhhhhcCCCChhhhHhhHHHHHHHHHHHHhCCCCCeeeEeeCCCCceeeeeeec-cceeEEEecc
Q 022183 91 PNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSIVR 169 (301)
Q Consensus 91 ~~v~vl~~~~~~~~~lt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~V~tp~g~~~~g~~~~-~~i~~V~IlR 169 (301)
+|+|+++|| +++|++|+|||++|++.+||++++||++||+|||++++|+++++|+||+| .+.|..+. +++|+|||||
T Consensus 1 ~~v~v~~hp-~i~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~~ea~~~l~~~~~~v~TP~~-~~~g~~~~g~~l~~V~ILr 78 (208)
T 2ehj_A 1 KKIVEVKHP-LVKHKLGLMREQDISTKRFRELASEVGSLLTYEATADLETEKVTIEGWNG-PVEIDQIKGKKITVVPILR 78 (208)
T ss_dssp CEEEECCCH-HHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEEETTE-EEEEEEECSSCCEEEEBTT
T ss_pred CCeEEcCCH-HHHHHHHHHHCCCCChHHHHHHHHHHHHHHHHHHHhcCCceEEEEECCCc-cEEEEEecCCceEEEEeec
Confidence 368999985 79999999999999999999999999999999999999999999999999 47888886 7999999999
Q ss_pred cchHHHHHHHHhccCCeeeeEEEEecCCCC-ceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEE
Q 022183 170 SGESMENALRACCKGIKIGKILIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIF 248 (301)
Q Consensus 170 aG~~m~~~l~~~~p~a~~G~i~i~Rd~~~~-~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~ 248 (301)
+|++|++++.+++|++++|+|+++||++++ +..||.++|.++++++|||+|||+|||+|+.+|++.|+++|+ ++|.+
T Consensus 79 aG~~~~~~l~~~ip~~~vg~i~~~rd~~t~~~~~~~~~lp~di~~r~VilvDd~laTG~T~~~ai~~L~~~G~--~~I~~ 156 (208)
T 2ehj_A 79 AGLGMMDGVLENVPSARISVVGMYRNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGC--SSIKV 156 (208)
T ss_dssp GGGGGHHHHHHHCTTCEECEEEEEECTTTCCEEEEEEECCSCGGGCEEEEEEEEESSCHHHHHHHHHHHHTTC--CEEEE
T ss_pred CHHHHHHHHHHhCCcCceeEEEEEEcCCCCceEEEecCCCCccCCCEEEEECCccccHHHHHHHHHHHHHcCC--CEEEE
Confidence 999999999999999999999999999888 778899999999999999999999999999999999999997 79999
Q ss_pred EEEEeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchhhhccCCC
Q 022183 249 LNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 300 (301)
Q Consensus 249 ~~~vas~~gl~~l~~~~p~v~i~t~~iD~~l~~~~~ivPGlGd~GdR~fgt~ 300 (301)
+|++++++|++++.++||+++|||++||++||++|||+|||||||||||||+
T Consensus 157 ~~lv~~p~g~~~l~~~~p~v~I~t~~iD~~lne~~yIvPGlGDaGDR~fgt~ 208 (208)
T 2ehj_A 157 LVLVAAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK 208 (208)
T ss_dssp EEEEECHHHHHHHHHHCTTSEEEESCBCSEECTTSCEESCCSCHHHHHHTCC
T ss_pred EEEEeCHHHHHHHHHHCCCcEEEEEecCCCCCCCceecCCCCcHHHhhcCCC
Confidence 9999999999999999999999999999999999999999999999999985
No 5
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=100.00 E-value=2e-62 Score=434.68 Aligned_cols=205 Identities=32% Similarity=0.521 Sum_probs=191.4
Q ss_pred ceeeccchHHHHHHhhhhhcCCCChhhhHhhHHHHHHHHHHHHhCCCCCeeeEeeCCCCceeeeeeec-cceeEEEeccc
Q 022183 92 NVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSIVRS 170 (301)
Q Consensus 92 ~v~vl~~~~~~~~~lt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~V~tp~g~~~~g~~~~-~~i~~V~IlRa 170 (301)
++|+++|| +++|++|+|||++|++.+||++++||++||+|||++++|+++++|+||+|. +.|..+. +++|+|||||+
T Consensus 2 ~v~v~~~p-~i~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~~ea~~~l~~~~~~v~TP~g~-~~g~~~~g~~l~~V~ILra 79 (208)
T 1v9s_A 2 RITLVDHP-LVQHKLAHLRDKRTGPKDFRELAEEVAMLMAYEAMRDLELEETTVETPIAP-ARVKVLSGKKLALVAILRA 79 (208)
T ss_dssp CEEECCCH-HHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEECSSSE-EEEEEECSSCCEEEEETTT
T ss_pred ceEEcCCH-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHccCCCeEEEEECCCce-EEEEEecCCceEEEEeccc
Confidence 68999986 799999999999999999999999999999999999999999999999994 7888886 79999999999
Q ss_pred chHHHHHHHHhccCCeeeeEEEEecCCCC-ceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEE
Q 022183 171 GESMENALRACCKGIKIGKILIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFL 249 (301)
Q Consensus 171 G~~m~~~l~~~~p~a~~G~i~i~Rd~~~~-~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~ 249 (301)
|++|++++.+++|++++|+|+++||++|+ +..||.++|.++++++|||+|||+|||+|+.+|++.|+++|+ ++|+++
T Consensus 80 G~~~~~~l~~~ip~~~vg~I~~~rd~~t~~~~~~~~~lp~di~~r~vilvDd~laTG~T~~~ai~~L~~~G~--~~I~~~ 157 (208)
T 1v9s_A 80 GLVMVEGILKLVPHARVGHIGLYRDPESLNPVQYYIKLPPDIAERRAFLLDPMLATGGSASLALSLLKERGA--TGVKLM 157 (208)
T ss_dssp HHHHHHHHHTTCTTCEEEEEEEC---------CEEEECCSCGGGSCEEEECSEESSSHHHHHHHHHHHHTTC--CSCEEE
T ss_pred hHHHHHHHHHhCCCCeeeEEEEEEcCCCCCceEEeccCCCccCCCEEEEECCccccHHHHHHHHHHHHHcCC--CEEEEE
Confidence 99999999999999999999999999888 778999999999999999999999999999999999999997 799999
Q ss_pred EEEeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchhhhccCCC
Q 022183 250 NLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 300 (301)
Q Consensus 250 ~~vas~~gl~~l~~~~p~v~i~t~~iD~~l~~~~~ivPGlGd~GdR~fgt~ 300 (301)
|++++++|++++.++||++.|||++||++||++|||+|||||||||||||+
T Consensus 158 ~lv~~~~g~~~l~~~~p~v~I~t~~iD~~lne~~yIvPGlGDaGDR~fgt~ 208 (208)
T 1v9s_A 158 AILAAPEGLERIAKDHPDTEVVVAAIDERLNDHGYIVPGLGDAGDRIYGTK 208 (208)
T ss_dssp EEEECHHHHHHHHHHCTTCEEEEEEECSEECTTSCEESSCSCHHHHHHTCC
T ss_pred EEEeCHHHHHHHHHHCCCcEEEEEeecCCCCCCceecCCCCcHHHhccCCC
Confidence 999999999999999999999999999999999999999999999999995
No 6
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=100.00 E-value=2.3e-61 Score=431.08 Aligned_cols=208 Identities=33% Similarity=0.498 Sum_probs=200.0
Q ss_pred CCCceeeccchHHHHHHhhhhhcCCCChhhhHhhHHHHHHHHHHHHhCCCCCeeeEeeCCCCceeeeeeec-cceeEEEe
Q 022183 89 IYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSI 167 (301)
Q Consensus 89 ~~~~v~vl~~~~~~~~~lt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~V~tp~g~~~~g~~~~-~~i~~V~I 167 (301)
.++++++.+|| ++++++|+|||++|++.+||++++||++||+|||++++|+++++|+||+|. +.|..+. +++|+|||
T Consensus 12 ~~~~~~~~~~p-~i~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~yEa~~~lp~~~~~v~TP~g~-~~g~~~~g~~lviV~I 89 (221)
T 1o5o_A 12 HMKNLVVVDHP-LIKHKLTIMRDKNTGPKEFRELLREITLLLAYEATRHLKCEEVEVETPITK-TIGYRINDKDIVVVPI 89 (221)
T ss_dssp CCTTEEECCCH-HHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEECSSCE-EEEEECCSTTEEEEEE
T ss_pred ccceEEecCCH-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhcCCceEEEEECCCce-EEEEEecCCeEEEEEE
Confidence 56788888886 799999999999999999999999999999999999999999999999994 7888887 79999999
Q ss_pred cccchHHHHHHHHhccCCeeeeEEEEecCCCC-ceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccE
Q 022183 168 VRSGESMENALRACCKGIKIGKILIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHI 246 (301)
Q Consensus 168 lRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~~-~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I 246 (301)
+|+|++|++++.+++|++++|+|+++|+++++ +..||.++|.++++++|||+|||+|||+|+.+|++.|+++|+ ++|
T Consensus 90 lrgG~~~~~~l~~~lp~a~vg~I~~~Rd~~t~~~~~~~~~lp~di~gr~VilvDd~laTG~Tl~~ai~~L~~~G~--~~I 167 (221)
T 1o5o_A 90 LRAGLVMADGILELLPNASVGHIGIYRDPETLQAVEYYAKLPPLNDDKEVFLLDPMLATGVSSIKAIEILKENGA--KKI 167 (221)
T ss_dssp ETTHHHHHHHHHHHSTTCEECEEEEEECTTTCCEEEEEEECCCCCTTCEEEEECSEESSSHHHHHHHHHHHHTTC--CEE
T ss_pred ecchHHHHHHHHHhCCCCcEEEEEEEEcCCCCceeEEEecCCCccCCCEEEEECCccccHHHHHHHHHHHHHcCC--CEE
Confidence 99999999999999999999999999999887 678899999999999999999999999999999999999998 799
Q ss_pred EEEEEEeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchhhhccCCC
Q 022183 247 IFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 300 (301)
Q Consensus 247 ~~~~~vas~~gl~~l~~~~p~v~i~t~~iD~~l~~~~~ivPGlGd~GdR~fgt~ 300 (301)
+++|++++++|++++.++||++.|||++||++||++|||+|||||||||||||+
T Consensus 168 ~~~~lv~~~~g~~~l~~~~p~v~I~t~~ID~~Lne~~yIvPGlGDaGDR~fGt~ 221 (221)
T 1o5o_A 168 TLVALIAAPEGVEAVEKKYEDVKIYVAALDERLNDHGYIIPGLGDAGDRLFRTK 221 (221)
T ss_dssp EEECSEECHHHHHHHHHHCTTCEEEESEECSEECTTSCEESSCSCHHHHHHTCC
T ss_pred EEEEEEeCHHHHHHHHHHCCCcEEEEEeccCCCCCCceecCCCCcHHHhccCCC
Confidence 999999999999999999999999999999999999999999999999999985
No 7
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=100.00 E-value=2e-59 Score=415.35 Aligned_cols=204 Identities=25% Similarity=0.386 Sum_probs=196.7
Q ss_pred eeeccchHHHHHHhhhhhcCCCChhhhHhhHHHHHHHHHHHHhCCCCCeeeEeeCCCCceeeeeeec-cceeEEEecccc
Q 022183 93 VYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSIVRSG 171 (301)
Q Consensus 93 v~vl~~~~~~~~~lt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~V~tp~g~~~~g~~~~-~~i~~V~IlRaG 171 (301)
+|+++|| +++|++|+|||++|++.+||++++||++||+|||++++|+++++|+||+|. +.|..+. +++|+|||||+|
T Consensus 2 v~~~~hp-~i~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~~ea~~~l~~~~~~v~TP~~~-~~~~~~~g~~~~~V~ILraG 79 (208)
T 2e55_A 2 IVELSHP-LIKHKVNTARIQDTSAEKLRKTLKELGFMLVYEALKDILLEEKEVRTWIGN-KRFNYLNEEEIVFVPILRAG 79 (208)
T ss_dssp EEECCCH-HHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEEETTEE-EEEEECCGGGEEEEEEETTT
T ss_pred EEecCCH-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCceeEEeCCCCc-eEeeeecCCcEEEEEEecch
Confidence 6888885 799999999999999999999999999999999999999999999999995 7888886 799999999999
Q ss_pred hHHHHHHHHhccCCeeeeEEEEecCCCC-ceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEE
Q 022183 172 ESMENALRACCKGIKIGKILIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLN 250 (301)
Q Consensus 172 ~~m~~~l~~~~p~a~~G~i~i~Rd~~~~-~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~ 250 (301)
++|++++.+++|++++|||+++||++++ +..||.++| +++|++|||+|||+|||+|+.+|++.|+++|+ ++|.++|
T Consensus 80 ~~~~~~l~~~lp~~~vg~i~~~rd~~t~~~~~~~~~lp-di~~r~vilvDd~laTG~T~~~ai~~L~~~G~--~~I~~~~ 156 (208)
T 2e55_A 80 LSFLEGALQVVPNAKVGFLGIKRNEETLESHIYYSRLP-ELKGKIVVILDPMLATGGTLEVALREILKHSP--LKVKSVH 156 (208)
T ss_dssp HHHHHHHHHHSTTCEECEEEEEECTTTCCEEEEEEECC-CCBTSEEEEECSEESSSHHHHHHHHHHHTTCB--SEEEEEE
T ss_pred HHHHHHHHHhCCCCcEEEEEEEEecCCCceEEEecCCC-CCCCCEEEEECCccccHHHHHHHHHHHHHcCC--CEEEEEE
Confidence 9999999999999999999999999888 788899999 99999999999999999999999999999997 8999999
Q ss_pred EEeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchhhhccCCCC
Q 022183 251 LISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD 301 (301)
Q Consensus 251 ~vas~~gl~~l~~~~p~v~i~t~~iD~~l~~~~~ivPGlGd~GdR~fgt~~ 301 (301)
++++++|++++.++||++.|||++||++||+++||+|||||||||+|||++
T Consensus 157 lv~~~~g~~~l~~~~p~v~I~t~~iD~~l~e~~~I~PglgdagdR~fgt~~ 207 (208)
T 2e55_A 157 AIAAPEGLKRIEEKFKEVEIFVGNVDERLNDKGYIIPGLGDIGDRLYAVSV 207 (208)
T ss_dssp EEECHHHHHHHHHHCTTSEEEEEEECSEECTTSCEESSCSSHHHHHHSCCC
T ss_pred EEECHHHHHHHHHHCCCcEEEEEeecCCCCCCceeccCccHHHHHhcCCCC
Confidence 999999999999999999999999999999999999999999999999974
No 8
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=100.00 E-value=6.1e-57 Score=400.46 Aligned_cols=207 Identities=34% Similarity=0.529 Sum_probs=198.1
Q ss_pred CCceeeccchHHHHHHhhhhhcCCCChhhhHhhHHHHHHHHHHHHhCCCCCeeeEeeCCCCceeeeeeec-cceeEEEec
Q 022183 90 YPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSIV 168 (301)
Q Consensus 90 ~~~v~vl~~~~~~~~~lt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~V~tp~g~~~~g~~~~-~~i~~V~Il 168 (301)
+.|+|+++|| +++|++|+|||++|++.+||++++||++||+|||++++|+++.+|+||+|. +.|..++ +++|+||||
T Consensus 1 ~~~v~~~~~p-~~~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~~ea~~~l~~~~~~V~tPl~~-~~~~~~~~~~~~vV~Il 78 (209)
T 1i5e_A 1 MGKVYVFDHP-LIQHKLTYIRDKNTGTKEFRELVDEVATLMAFEITRDLPLEEVEIETPVSK-ARAKVIAGKKLGVIPIL 78 (209)
T ss_dssp -CCEEECCCH-HHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHGGGCCEEEEEEECSSCE-EEEEEECCCCEEEEEBT
T ss_pred CCCeEEcCCH-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcceEEecCCce-eeeeEecCCceEEEEEe
Confidence 4689999996 799999999999999999999999999999999999999999999999995 6788886 799999999
Q ss_pred ccchHHHHHHHHhccCCeeeeEEEEecCCCC-ceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEE
Q 022183 169 RSGESMENALRACCKGIKIGKILIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHII 247 (301)
Q Consensus 169 RaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~~-~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~ 247 (301)
|+|++|++++.+.+|++++|+++.+|++.++ +..||.++|.++++++|+|+|||++||+|+.+|++.|+++|+ ++|.
T Consensus 79 r~G~~~~~~L~~~l~~~~~~~i~~~r~~~t~~~~~~~~~lp~~i~~~~VllvDd~l~TG~T~~~a~~~L~~~G~--~~I~ 156 (209)
T 1i5e_A 79 RAGIGMVDGILKLIPAAKVGHIGLYRDPQTLKPVEYYVKLPSDVEERDFIIVDPMLATGGSAVAAIDALKKRGA--KSIK 156 (209)
T ss_dssp TGGGGGHHHHHHHCTTSEECEEEEECCTTCSSCEEEEEECCTTTTTSEEEEECSEESSSHHHHHHHHHHHHTTC--CCEE
T ss_pred cCChHHHHHHHHhCCCCeEEEEEEEEcCCCCceEEEEEcCCCccCCCEEEEEcCCCcCHHHHHHHHHHHHHcCC--CEEE
Confidence 9999999999999999999999999998887 678899999999999999999999999999999999999998 7999
Q ss_pred EEEEEeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchhhhccCCC
Q 022183 248 FLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 300 (301)
Q Consensus 248 ~~~~vas~~gl~~l~~~~p~v~i~t~~iD~~l~~~~~ivPGlGd~GdR~fgt~ 300 (301)
++|++++++|++++.++||++.|||++||++||+++||+|||||||||||||+
T Consensus 157 ~~~lv~~~~g~~~l~~~~p~~~I~t~~id~~l~~~~~i~Pglgdagdr~fgt~ 209 (209)
T 1i5e_A 157 FMCLIAAPEGVKAVETAHPDVDIYIAALDERLNDHGYIVPGLGDAGDRLFGTK 209 (209)
T ss_dssp EECSEECHHHHHHHHHHCTTCEEEESEECCEECTTCCEESSCSCHHHHHHSCC
T ss_pred EEEEEECHHHHHHHHHhCcCcEEEEEEeCCCCCCCceEccCCchHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999985
No 9
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=99.26 E-value=7.4e-11 Score=101.44 Aligned_cols=119 Identities=20% Similarity=0.262 Sum_probs=91.4
Q ss_pred ChhhhHhhHHHHHHHHHHHHhCCCCCeeeEeeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhccC-CeeeeEEEE
Q 022183 115 SKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCKG-IKIGKILIH 193 (301)
Q Consensus 115 ~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~V~tp~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p~-a~~G~i~i~ 193 (301)
+..+|+..+++|+..+.+.. + +. .+.++|+++++|.+++..+.+.+.. ..++++.+.
T Consensus 10 s~~~i~~~i~~La~~I~~~~----~---------------~~---~~~vvVgi~~gG~~~a~~la~~L~~~~~~~~i~~~ 67 (177)
T 3ohp_A 10 SEQEVAQRIRELGQQITEHY----Q---------------GS---SDLVLVGLLRGSFVFMADLARQIHLTHQVDFMTAS 67 (177)
T ss_dssp CHHHHHHHHHHHHHHHHHHT----T---------------TC---SCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHc----C---------------CC---CCeEEEEECcchHHHHHHHHHHcCCCceEEEEEEE
Confidence 45677778888877766541 1 00 1278999999999999999999873 567888764
Q ss_pred --ecCC--CCceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHH
Q 022183 194 --RDGD--NGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEG 257 (301)
Q Consensus 194 --Rd~~--~~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~g 257 (301)
|++. ++.......++.+++|++|+|+||+++||+|+.++++.|++.|+ ++|.+++++..+.+
T Consensus 68 ~y~~~~~~~~~v~i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~--~~v~~~~l~~~~~~ 133 (177)
T 3ohp_A 68 SYGNSMQSSRDVRILKDLDDDIKGKDVLLVEDIIDTGNTLNKVKEILALREP--KSIRICTLLDKPTR 133 (177)
T ss_dssp C--------CCCCEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCC--SEEEEEEEEECGGG
T ss_pred EEcCCCccCCcEEEecCCCcccCCCEEEEEeeEeCcHHHHHHHHHHHHhcCC--cEEEEEEEEECCcc
Confidence 3432 23322346788889999999999999999999999999999998 78999999999876
No 10
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=99.25 E-value=7.1e-11 Score=101.88 Aligned_cols=120 Identities=16% Similarity=0.180 Sum_probs=92.6
Q ss_pred CCChhhhHhhHHHHHHHHHHHHhCCCCCeeeEeeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhcc-CCeeeeEE
Q 022183 113 GISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCK-GIKIGKIL 191 (301)
Q Consensus 113 ~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~V~tp~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p-~a~~G~i~ 191 (301)
--+..+++..+++|+..+.+.. + + ++.++|+++++|.+++..+.+.+. ...++++.
T Consensus 13 li~~~~i~~~i~~La~~I~~~~----~---------------~----~~~vvVgi~~gg~~~a~~la~~L~~p~~~~~i~ 69 (181)
T 2ywu_A 13 QISAEAIKKRVEELGGEIARDY----Q---------------G----KTPHLICVLNGAFIFMADLVRAIPLPLTMDFIA 69 (181)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHT----T---------------T----CCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHHHHc----C---------------C----CCCEEEEECchhHHHHHHHHHHcCCCceEEEEE
Confidence 3466778888888888776541 0 1 257899999999999999999987 45678877
Q ss_pred EEe--cCC--CCceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHH
Q 022183 192 IHR--DGD--NGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEG 257 (301)
Q Consensus 192 i~R--d~~--~~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~g 257 (301)
..+ ++. ++.......++.+++|++|+|+||+++||+|+.++++.|++.|+ ++|.+++++..+++
T Consensus 70 ~~~y~~~~~~~~~v~i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~--~~v~~~~l~~k~~~ 137 (181)
T 2ywu_A 70 ISSYGNAFKSSGEVELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKP--ASVRVAALLSKPSR 137 (181)
T ss_dssp EC------------CEEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCC--SEEEEEEEEECGGG
T ss_pred EEEecCCccccCcEEEEecCCCCCCCCEEEEECCeeCChHHHHHHHHHHHhcCC--cEEEEEEEEECCCC
Confidence 643 332 22222345678889999999999999999999999999999997 78999999999886
No 11
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=99.21 E-value=1e-10 Score=101.40 Aligned_cols=119 Identities=14% Similarity=0.229 Sum_probs=94.9
Q ss_pred ChhhhHhhHHHHHHHHHHHHhCCCCCeeeEeeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhccC-CeeeeEEEE
Q 022183 115 SKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCKG-IKIGKILIH 193 (301)
Q Consensus 115 ~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~V~tp~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p~-a~~G~i~i~ 193 (301)
+..+|+..+++|+..+.+.. + + ++.++|+++++|.+++..+.+.+.- .+++++.+.
T Consensus 14 ~~~~i~~~i~~La~~I~~~~----~---------------~----~~~vvVgi~~gG~~~a~~la~~L~~p~~i~~i~~~ 70 (186)
T 3o7m_A 14 SEEQLQEKVKELALQIERDF----E---------------G----EEIVVIAVLKGSFVFAADLIRHIKNDVTIDFISAS 70 (186)
T ss_dssp CHHHHHHHHHHHHHHHHHHT----T---------------T----SCEEEEEETTTTHHHHHHHHTTCCSCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHc----C---------------C----CCCEEEEECcchHHHHHHHHHHhCCCCceEEEEEE
Confidence 56688888888888776541 1 1 2578999999999999999999873 578888875
Q ss_pred ecC----CCCceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHH
Q 022183 194 RDG----DNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGI 258 (301)
Q Consensus 194 Rd~----~~~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~gl 258 (301)
+.. .++.......++.+++|++|+|+||+++||+|+.++++.|++.|+ ++|.+++++..+++-
T Consensus 71 ~Y~~~~~~~~~v~i~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~--~~v~~~~l~~k~~~~ 137 (186)
T 3o7m_A 71 SYGNQTETTGKVKLLKDIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKP--KALKFCTLLDKPERR 137 (186)
T ss_dssp ECC-------CEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCC--SEEEEEEEEECGGGC
T ss_pred EecCCCcccCcEEEEecCCCCCCcCEEEEEcCeeCCcHHHHHHHHHHHhcCC--cEEEEEEEEECCCCC
Confidence 532 123333346788889999999999999999999999999999997 789999999999874
No 12
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=99.20 E-value=1.5e-10 Score=101.75 Aligned_cols=120 Identities=13% Similarity=0.240 Sum_probs=96.5
Q ss_pred CChhhhHhhHHHHHHHHHHHHhCCCCCeeeEeeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhccC-CeeeeEEE
Q 022183 114 ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCKG-IKIGKILI 192 (301)
Q Consensus 114 T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~V~tp~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p~-a~~G~i~i 192 (301)
-+..+|+..+++|+..+.+.. .+ ++.++|+++++|.+++..+.+.+.- .+++++..
T Consensus 35 ~s~~~i~~~i~~LA~~I~~~~-------------------~~----~~~vVVgi~~GG~~~a~~La~~L~~p~~~~~i~~ 91 (204)
T 3hvu_A 35 ISEEQIQEKVLELGAIIAEDY-------------------KN----TVPLAIGVLKGAMPFMADLLKRTDTYLEMDFMAV 91 (204)
T ss_dssp ECHHHHHHHHHHHHHHHHHHT-------------------SS----SCCEEEEETTTTHHHHHHHHHTCCSCCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHc-------------------CC----CCCEEEEeCcchHHHHHHHHHHhCCCcceEEEEE
Confidence 356789999999888776541 01 2468999999999999999999874 56888887
Q ss_pred Eec--C--CCCceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHH
Q 022183 193 HRD--G--DNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGI 258 (301)
Q Consensus 193 ~Rd--~--~~~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~gl 258 (301)
.+. + .++.......++.+++|++|+|+||+++||+|+.++++.|++.|+ ++|.+++++..+++-
T Consensus 92 ~~Y~~~~~~~~~v~i~~~l~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~--~~v~~~~l~~k~~~~ 159 (204)
T 3hvu_A 92 SSYGHSTVSTGEVKILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKA--KSVKIVTLLDKPTGR 159 (204)
T ss_dssp EECSGGGTTSCCEEEEECCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTC--SEEEEEEEEECGGGC
T ss_pred EEecCCCccCCcEEEEcCCCccCCCCEEEEEeceeCchHHHHHHHHHHHHcCC--CEEEEEEEEECCCCC
Confidence 653 2 223333346788889999999999999999999999999999997 789999999998873
No 13
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=99.18 E-value=3.1e-11 Score=104.63 Aligned_cols=84 Identities=48% Similarity=0.876 Sum_probs=78.7
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhh
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (301)
+|.+||+|++.+.++.|++.||..++|+++..+.++|.+.++|.|.+|++|.+++||+||++++++..+++.+.++|++.
T Consensus 125 ~d~~i~ld~~~~~~~~r~l~r~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~~~aD~ii~~~~~~~~~~~~~~~~i~~~ 204 (211)
T 3asz_A 125 MDLKVFVDADADERFIRRLKRDVLERGRSLEGVVAQYLEQVKPMHLHFVEPTKRYADVIVPRGGQNPVALEMLAAKALAR 204 (211)
T ss_dssp CSEEEEEECCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHTHHHHHHHTTGGGGGGCSEEEESTTSCHHHHHHHHHHHTHH
T ss_pred cCEEEEEeCCHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhhhhhHHHhcccchhcCeEEEeCCCcchHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999988899999999999988
Q ss_pred cccc
Q 022183 81 LGQH 84 (301)
Q Consensus 81 l~~~ 84 (301)
+.+.
T Consensus 205 ~~~~ 208 (211)
T 3asz_A 205 LARM 208 (211)
T ss_dssp HHC-
T ss_pred HHhh
Confidence 7654
No 14
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=99.16 E-value=2.6e-10 Score=98.35 Aligned_cols=120 Identities=15% Similarity=0.256 Sum_probs=90.5
Q ss_pred CChhhhHhhHHHHHHHHHHHHhCCCCCeeeEeeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhccC-CeeeeEEE
Q 022183 114 ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCKG-IKIGKILI 192 (301)
Q Consensus 114 T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~V~tp~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p~-a~~G~i~i 192 (301)
.+..++.....+|+..+... ++ + +..++|++.++|.++...+.+.+.- ...+.+..
T Consensus 17 ~~~~~i~~~~~~La~~i~~~----~~---------------~----~~~vvv~i~~gG~~~a~~la~~l~~p~~~~~i~~ 73 (185)
T 2geb_A 17 ITEEQLKAKVKELGEMITRD----YE---------------G----KDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAV 73 (185)
T ss_dssp ECHHHHHHHHHHHHHHHHHH----TT---------------T----SCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEE
T ss_pred eCHHHHHHHHHHHHHHHHHH----cC---------------C----CCCEEEEECcCcHHHHHHHHHHcCCCceeEEEEE
Confidence 34556777777776666532 10 0 2468999999999999999999863 35576665
Q ss_pred EecCC----CCceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHH
Q 022183 193 HRDGD----NGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGI 258 (301)
Q Consensus 193 ~Rd~~----~~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~gl 258 (301)
.+... ++.......++.+++|++|+|+||+++||+|+.++++.|+++|+ ++|.+++++..+++.
T Consensus 74 ~~y~~~~~~~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga--~~V~~~~l~~~~~~~ 141 (185)
T 2geb_A 74 SSYGSSTKSSGIVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKP--RSLKICTILDKPERR 141 (185)
T ss_dssp EECSTTHHHHCCEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCC--SEEEEEEEEECGGGC
T ss_pred EecCCCCccCccEEEeccCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCC--CEEEEEEEEECCCcc
Confidence 44321 12222245677789999999999999999999999999999998 789999999999884
No 15
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.15 E-value=2.8e-10 Score=99.79 Aligned_cols=111 Identities=19% Similarity=0.358 Sum_probs=84.2
Q ss_pred eeEEEecccchHHHHHHHHhccCCeeeeEEEEecCC-------------CCceeE-------------------------
Q 022183 162 LCGVSIVRSGESMENALRACCKGIKIGKILIHRDGD-------------NGKQLI------------------------- 203 (301)
Q Consensus 162 i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~-------------~~~~~~------------------------- 203 (301)
.+++++.|+|.++...+.+.+ ++++..+.+++... ++....
T Consensus 25 ~vVv~v~rGg~~~A~~la~~l-~~p~~~~~~rk~~~~~~~e~~~ga~s~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 103 (208)
T 1wd5_A 25 PVVLGLPRGGVVVADEVARRL-GGELDVVLVRKVGAPGNPEFALGAVGEGGELVLMPYALRYADQSYLEREAARQRDVLR 103 (208)
T ss_dssp CEEEECTTHHHHHHHHHHHHH-TCEEEECCEEEEEETTEEEEEEEEEETTCCEEECTTHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHh-CCCeEEEEEEEecCCCCchhhcceecCCCcEEechhhhcccCHHHHHHHHHHHHHHHH
Confidence 478889999999999988876 34444333433211 221110
Q ss_pred -----e--ecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCCcEEEEEeec
Q 022183 204 -----Y--EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEID 276 (301)
Q Consensus 204 -----y--~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~gl~~l~~~~p~v~i~t~~iD 276 (301)
| ...+.+++|++|+|+||+++||+|+.++++.|++.|+ ++|.+++++.++++.+++.... ++++..+.
T Consensus 104 ~r~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga--~~V~v~~~v~~~~~~~~l~~~~---~~v~~~~~ 178 (208)
T 1wd5_A 104 KRAERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVVFQEGP--RRVVVAVPVASPEAVERLKARA---EVVALSVP 178 (208)
T ss_dssp HHHHHHHHHSCCCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCC--SEEEEEEEEBCHHHHHHHHTTS---EEEEEECC
T ss_pred HHHHHhhccCCCCCCCCCEEEEECCCccHHHHHHHHHHHHHHcCC--CEEEEEEEEcCHHHHHHhcccC---cEEEEecC
Confidence 1 2455678999999999999999999999999999998 7899999999999999987653 88887765
Q ss_pred CC
Q 022183 277 VA 278 (301)
Q Consensus 277 ~~ 278 (301)
+.
T Consensus 179 ~~ 180 (208)
T 1wd5_A 179 QD 180 (208)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 16
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=99.14 E-value=2.3e-10 Score=103.43 Aligned_cols=120 Identities=10% Similarity=0.106 Sum_probs=95.7
Q ss_pred CChhhhHhhHHHHHHHHHHHHhCCCCCeeeEeeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhcc----------
Q 022183 114 ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCK---------- 183 (301)
Q Consensus 114 T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~V~tp~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p---------- 183 (301)
-+..+|+..+++|++.+.++.- + ++.++|+|+++|..|...+.+.+.
T Consensus 64 i~~~~I~~~i~~LA~~I~~~~~-------------------~----~~~vVVgIl~gG~~fa~~La~~L~~~~v~~~rk~ 120 (250)
T 3ozf_A 64 VPNGVIKNRIEKLAYDIKKVYN-------------------N----EEFHILCLLKGSRGFFTALLKHLSRIHNYSAVET 120 (250)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHT-------------------T----CCEEEEEEETTTHHHHHHHHHHHHHHHHHHCCTT
T ss_pred ECHHHHHHHHHHHHHHHHHHcC-------------------C----CCCEEEEECcchHHHHHHHHHHhccccccccccc
Confidence 5677899999999888876531 1 247899999999999988887764
Q ss_pred ---CCeeeeEEEEe--cCCC-CceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHH
Q 022183 184 ---GIKIGKILIHR--DGDN-GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEG 257 (301)
Q Consensus 184 ---~a~~G~i~i~R--d~~~-~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~g 257 (301)
..+++++.+++ ++.+ +.......++.+++|++|+|+||+++||+|+.++++.|++.|+ ++|.+++++..+++
T Consensus 121 gklP~~v~fI~~ssY~~~~s~g~v~i~~~~~~~~~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~--~~v~va~l~~k~~~ 198 (250)
T 3ozf_A 121 SKPLFGEHYVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEI--KTVAIACLFIKRTP 198 (250)
T ss_dssp CCCCEEEEEEEEEEEETTEEEEEEEEECCCGGGGTTCEEEEEEEEESSSHHHHHHHHHHGGGCC--SEEEEEEEEEECCT
T ss_pred cCCCceEEEEEEEEecCCcccCcEEEEcCCccccCCCEEEEEeceeCchHHHHHHHHHHHhcCC--CEEEEEEEEECCcc
Confidence 46688887644 3332 2222346777788999999999999999999999999999998 78999999998877
Q ss_pred H
Q 022183 258 I 258 (301)
Q Consensus 258 l 258 (301)
.
T Consensus 199 r 199 (250)
T 3ozf_A 199 L 199 (250)
T ss_dssp T
T ss_pred c
Confidence 3
No 17
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=99.13 E-value=2.4e-10 Score=101.20 Aligned_cols=136 Identities=14% Similarity=0.165 Sum_probs=92.1
Q ss_pred cCCCChhhhHhhHHHHHHHHHHHHhCCCCCeeeEeeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhcc-------
Q 022183 111 DRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCK------- 183 (301)
Q Consensus 111 d~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~V~tp~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p------- 183 (301)
..-.+..+|+...++|+..|..+. . .+..++|++.|+|.+++..+.+.+.
T Consensus 33 ~il~~~~~~~~~~~~La~~i~~~~-------------------~----~~~~vVvgi~~GG~~~a~~la~~L~~~~~i~~ 89 (217)
T 1z7g_A 33 RVFIPHGLIMDRTERLARDVMKEM-------------------G----GHHIVALCVLKGGYKFFADLLDYIKALNRNSD 89 (217)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHH-------------------T----TSCEEEEEECSSCCHHHHHHHHHHHHHHTTCS
T ss_pred eEEECHHHHHHHHHHHHHHHHHHc-------------------C----CCCCEEEEECCCCHHHHHHHHHHhCCccccCC
Confidence 334677889999999888876431 0 1246899999999999988887775
Q ss_pred ---CCeeeeEEE--EecCCCCceeEee--cCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHH
Q 022183 184 ---GIKIGKILI--HRDGDNGKQLIYE--KLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPE 256 (301)
Q Consensus 184 ---~a~~G~i~i--~Rd~~~~~~~~y~--~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~ 256 (301)
....+++.+ ++++.+..+..+. ..+.+++|++|+|+||+++||+|+.++++.|+++|+ ++|.+++++..++
T Consensus 90 g~~~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~g~--~~v~~~~l~~k~~ 167 (217)
T 1z7g_A 90 RSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNP--KMVKVASLLVKRT 167 (217)
T ss_dssp SCCCEEEEEECBC----------CCBCCSSCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCC--SEEEEEEEEEECC
T ss_pred CceEeeeeeEEEEEecccccccceEEecCCCccccCCCEEEEEeceeCcHHHHHHHHHHHHhcCC--CEEEEEEEEECcc
Confidence 334555543 2332221112222 234578999999999999999999999999999998 7899999999888
Q ss_pred HHHHHHHhCCCcEEEEEee
Q 022183 257 GIHCVCKRFPSLKIVTSEI 275 (301)
Q Consensus 257 gl~~l~~~~p~v~i~t~~i 275 (301)
+ +.....|+ .++-.+
T Consensus 168 ~--~~~~~~~d--yvg~~~ 182 (217)
T 1z7g_A 168 P--RSVGYKPD--FVGFEI 182 (217)
T ss_dssp -------CCCS--EEEEEE
T ss_pred c--ccCCCCCc--EEEEEc
Confidence 6 55555665 444444
No 18
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=99.06 E-value=8.7e-10 Score=96.51 Aligned_cols=110 Identities=14% Similarity=0.203 Sum_probs=82.9
Q ss_pred ceeEEEecccchHHHHHHHHhccC-CeeeeEEEEecCC----CCceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHH
Q 022183 161 KLCGVSIVRSGESMENALRACCKG-IKIGKILIHRDGD----NGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQL 235 (301)
Q Consensus 161 ~i~~V~IlRaG~~m~~~l~~~~p~-a~~G~i~i~Rd~~----~~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~ 235 (301)
..++|++.++|.++...+.+.+.- ...+.+...+... ++.......++.+++|++|+|+||+++||+|+.++++.
T Consensus 61 ~~viv~v~~gG~~~a~~la~~l~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~ 140 (205)
T 1yfz_A 61 DLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYGSSTKSSGIVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRET 140 (205)
T ss_dssp CEEEEEETTTHHHHHHHHHHTCCSCCEEEEEEEEECSHHHHHHCCEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHH
T ss_pred CCEEEEECcCCHHHHHHHHHHhCCCceeEEEEEEeccCCccccceEEEeccCCCCCCcCEEEEECCccCcHHHHHHHHHH
Confidence 468999999999999999999863 3456665544321 12212235677789999999999999999999999999
Q ss_pred HHHcCCCCccEEEEEEEeCHHHHHHHHHhCCCcEEEEEeec
Q 022183 236 LIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEID 276 (301)
Q Consensus 236 L~~~g~~~~~I~~~~~vas~~gl~~l~~~~p~v~i~t~~iD 276 (301)
|++.|+ ++|.+++++..+++.+ + ...| ..++-.++
T Consensus 141 L~~~Ga--~~V~~~~l~~~~~~~~-~-~~~~--d~~g~~~p 175 (205)
T 1yfz_A 141 LLGRKP--RSLKICTILDKPERRE-A-DVKV--DYCGFKIP 175 (205)
T ss_dssp HHTTCC--SEEEEEEEEECGGGCC-S-CCCC--SEEEEECC
T ss_pred HHhcCC--CEEEEEEEEecCcccc-C-CCCC--CEEEEEcC
Confidence 999998 7899999999998842 2 2234 45555554
No 19
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=99.05 E-value=8.3e-10 Score=98.04 Aligned_cols=124 Identities=13% Similarity=0.201 Sum_probs=89.2
Q ss_pred ChhhhHhhHHHHHHHHHHHHhCCCCCeeeEeeCCCCceeeeeeeccc-eeEEEecccchHHHHHHHHhc---c-CCeeee
Q 022183 115 SKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKK-LCGVSIVRSGESMENALRACC---K-GIKIGK 189 (301)
Q Consensus 115 ~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~V~tp~g~~~~g~~~~~~-i~~V~IlRaG~~m~~~l~~~~---p-~a~~G~ 189 (301)
+..++.....+|+..+..+.-..- + .. .++ .++|+++++|.++...+.+.+ . ....++
T Consensus 13 ~~~~i~~~~~~La~~I~~~~~~~~---------~--~~------~~p~~vVv~v~~gG~~~a~~La~~L~~~~~p~~~~~ 75 (220)
T 1tc1_A 13 TEEEIRTRIKEVAKRIADDYKGKG---------L--RP------YVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEF 75 (220)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTSC---------C--BT------TTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHccCcc---------c--cc------CCCCeEEEEeccCCHHHHHHHHHHHHhcCCCccccE
Confidence 456777778888777764321100 0 00 123 689999999999999988888 4 234666
Q ss_pred EEEEecC----CCCceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHH
Q 022183 190 ILIHRDG----DNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEG 257 (301)
Q Consensus 190 i~i~Rd~----~~~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~g 257 (301)
+...+.. .++.......++.+++|++|||+||+++||+|+.++++.|++.|+ ++|.+++++..+++
T Consensus 76 l~~~~y~~~~~~~~~v~~~~~~~~~v~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga--~~V~v~~l~~k~~~ 145 (220)
T 1tc1_A 76 ICVSSYGEGLTSSGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRP--ASLKTVVLLDKREG 145 (220)
T ss_dssp EEEECC---------CEEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCC--SEEEEEEEEECTTC
T ss_pred EEEeecCCCcccCCcEEEecCCCccCCCCEEEEEeCccCcHHHHHHHHHHHHhcCC--CEEEEEEEEECCcc
Confidence 6654432 122111235677789999999999999999999999999999998 78999999999887
No 20
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=99.04 E-value=3.7e-10 Score=100.50 Aligned_cols=120 Identities=16% Similarity=0.199 Sum_probs=85.9
Q ss_pred CCChhhhHhhHHHHHHHHHHHHhCCCCCeeeEeeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhcc---------
Q 022183 113 GISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCK--------- 183 (301)
Q Consensus 113 ~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~V~tp~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p--------- 183 (301)
-.+..++.....+|+..+..+. + .++.++|+++++|.+++..+.+.+.
T Consensus 43 l~~~~~i~~~~~~La~~i~~~~----~-------------------~~~~vvv~i~~gG~~~a~~la~~L~~~~~~~~~~ 99 (225)
T 2jbh_A 43 LIPHGIIVDRIERLAKDIMKDI----G-------------------YSDIMVLCVLKGGYKFXADLVEHLKNISRNSDRF 99 (225)
T ss_dssp EECHHHHHHHHHHHHHHHHHHH----T-------------------TSCEEEEEEETTTHHHHHHHHHHHHHHHHHSSCC
T ss_pred EECHHHHHHHHHHHHHHHHHHc----C-------------------CCCCEEEEEcCCCEehhHHHHHHhhhhccccccC
Confidence 3456677777777777665431 0 0246899999999999988888775
Q ss_pred -CCeeeeEEEEec--CC-CCc-eeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHH
Q 022183 184 -GIKIGKILIHRD--GD-NGK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEG 257 (301)
Q Consensus 184 -~a~~G~i~i~Rd--~~-~~~-~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~g 257 (301)
...++++...+. +. ++. ++.....+.+++|++|||+||+++||+|+.++++.|+++|+ ++|.+++++..+++
T Consensus 100 ~p~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~v~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga--~~V~va~l~~k~~~ 176 (225)
T 2jbh_A 100 VSMKVDFIRLKSYRNDQSMGEMQIIGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKP--NMIKVASLLVKRTS 176 (225)
T ss_dssp CCEEEEEEEEC----------CCEESSSCGGGGTTSEEEEEEEEESSSHHHHHHHHHHHTTCC--SEEEEEEEEEECC-
T ss_pred CCceEEEEEEEeccCccccccEEEecCCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCC--CEEEEEEEEECCcc
Confidence 455777765432 22 221 22222334578999999999999999999999999999998 78999999988876
No 21
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=99.04 E-value=7.4e-10 Score=95.18 Aligned_cols=135 Identities=15% Similarity=0.113 Sum_probs=93.8
Q ss_pred CChhhhHhhHHHHHHHHHHHHhCCCCCeeeEeeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhccC-CeeeeEEE
Q 022183 114 ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCKG-IKIGKILI 192 (301)
Q Consensus 114 T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~V~tp~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p~-a~~G~i~i 192 (301)
.+..++.....+|+..+.... + + ++.++|++.++|.++...+.+.+.- ..++++.+
T Consensus 15 ~~~~~i~~~~~~la~~i~~~~----~---------------~----~~~vvv~i~~gg~~~a~~la~~l~~p~~~~~~~~ 71 (183)
T 1hgx_A 15 YNQDDIQKRIRELAAELTEFY----E---------------D----KNPVMICVLTGAVFFYTDLLKHLDFQLEPDYIIC 71 (183)
T ss_dssp ECHHHHHHHHHHHHHHHHHHH----T---------------T----TCCEEEEETTTTHHHHHHHHTTCCSCCEEEEEEE
T ss_pred cCHHHHHHHHHHHHHHHHHHc----C---------------C----CCcEEEEeCcChHHHHHHHHHHcCCCcceeEEEE
Confidence 445567777777776664321 0 0 2468999999999999999998863 44555555
Q ss_pred Eec--CC-CCceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCCcE
Q 022183 193 HRD--GD-NGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLK 269 (301)
Q Consensus 193 ~Rd--~~-~~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~gl~~l~~~~p~v~ 269 (301)
.+. +. ++.......++.+++|++|+|+||+++||+|+.++++.|+++|+ ++|.+++++..++|.+++. ..| .
T Consensus 72 ~~y~~~~~~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga--~~v~~~~l~~~~~g~~~~~-~~~--d 146 (183)
T 1hgx_A 72 SSYSGTKSTGNLTISKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKP--ASLKVCTLCDKDIGKKAYD-VPI--D 146 (183)
T ss_dssp EC---------CEEEECCSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCC--SEEEEEEEEEECCSSCSSC-CCC--S
T ss_pred EecCCcccccceEEeecCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCC--CEEEEEEEEecCcccccCC-CCC--C
Confidence 322 11 12222234567789999999999999999999999999999998 7899999988887655442 234 4
Q ss_pred EEEEeec
Q 022183 270 IVTSEID 276 (301)
Q Consensus 270 i~t~~iD 276 (301)
.++-.++
T Consensus 147 ~~g~~~p 153 (183)
T 1hgx_A 147 YCGFVVE 153 (183)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 5555554
No 22
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=99.04 E-value=3.4e-10 Score=101.04 Aligned_cols=82 Identities=63% Similarity=1.081 Sum_probs=73.4
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhh
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (301)
+|.+|||.++.++++.|++.||+ ++|++.++++++|.+..+|.+++|++|.++.||+||+++.+|...++.+.+.+.+.
T Consensus 154 ~~~~i~v~th~~~~~~r~~~r~~-~~G~~~e~~~~~~~~~~~~~~~~~i~p~~~~aD~vi~~~~dn~~~~~~l~~~i~~~ 232 (245)
T 2jeo_A 154 FHLRLFVDTDSDVRLSRRVLRDV-RRGRDLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDI 232 (245)
T ss_dssp CSEEEEEECCHHHHHHHHHHHHT-C---CHHHHHHHHHHTHHHHHHHHTGGGGGGCSEEEESSTTCHHHHHHHHHHHHHH
T ss_pred cCeEEEEECCHHHHHHHHHHHHH-HcCCCHHHHHHHHHHhhhHhHHHhCCcchhcceEEEcCCCCccHHHHHHHHHHHHH
Confidence 37899999999999999999999 89999999999999999999999999999999999998878888899999999887
Q ss_pred ccc
Q 022183 81 LGQ 83 (301)
Q Consensus 81 l~~ 83 (301)
+++
T Consensus 233 ~~~ 235 (245)
T 2jeo_A 233 LNG 235 (245)
T ss_dssp HHT
T ss_pred Hhc
Confidence 754
No 23
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=99.02 E-value=1.5e-09 Score=90.19 Aligned_cols=94 Identities=19% Similarity=0.219 Sum_probs=73.0
Q ss_pred eeEEEecccchHHHHHHHHhccCCeeeeEEEEecCC--C-Cc-eeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHH
Q 022183 162 LCGVSIVRSGESMENALRACCKGIKIGKILIHRDGD--N-GK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLI 237 (301)
Q Consensus 162 i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~--~-~~-~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~ 237 (301)
.++|++.|+|.++...+.+.+.-..++.+...+... + .. ..+....+.+++|++|+|+||+++||+|+.++++.|+
T Consensus 28 d~iv~v~~gg~~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~ 107 (153)
T 1vdm_A 28 DVIIGVARGGLIPAVRLSHILGDIPLKVIDVKFYKGIDERGEKPVITIPIHGDLKDKRVVIVDDVSDTGKTLEVVIEEVK 107 (153)
T ss_dssp SEEEEETTTTHHHHHHHHHHTTSCCEEEEEEECCCC--CCCSSCEEEECCCSCCBTCEEEEEEEEESSCHHHHHHHHHHH
T ss_pred CEEEEECCcCHHHHHHHHHHhCCCceEEEEEEEecCCcccccceeEeccCCcCCCCCEEEEEecccCChHHHHHHHHHHH
Confidence 478889999999999999988754455444432211 1 11 2234556677899999999999999999999999999
Q ss_pred HcCCCCccEEEEEEEeCHHH
Q 022183 238 EKGVPESHIIFLNLISAPEG 257 (301)
Q Consensus 238 ~~g~~~~~I~~~~~vas~~g 257 (301)
+.|+ ++|.++++...+.+
T Consensus 108 ~~ga--~~v~~~~l~~~~~~ 125 (153)
T 1vdm_A 108 KLGA--KEIKIACLAMKPWT 125 (153)
T ss_dssp TTTB--SEEEEEEEEECTTC
T ss_pred HcCC--CEEEEEEEEeCCCC
Confidence 9998 78999999888876
No 24
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=99.01 E-value=5e-10 Score=104.64 Aligned_cols=134 Identities=19% Similarity=0.151 Sum_probs=93.7
Q ss_pred cceeEEEecccchHHHHHHHHhccCCeeeeEEEEecCCCCceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHc
Q 022183 160 KKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEK 239 (301)
Q Consensus 160 ~~i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~ 239 (301)
++.++|++.++|..++..+.+.+. ++++.+.-.|...+.. ....++.+++|++|+|+|||++||+|+.+|++.|+++
T Consensus 167 ~~~vVv~pd~Gg~~~A~~la~~L~-~p~~~l~k~r~~~~~~--~~~~l~~~v~gk~VlLVDDiitTG~Tl~~aa~~Lk~~ 243 (317)
T 1dku_A 167 EDIVIVSPDHGGVTRARKLADRLK-APIAIIDKRRPRPNVA--EVMNIVGNIEGKTAILIDDIIDTAGTITLAANALVEN 243 (317)
T ss_dssp CSEEEEESSGGGHHHHHHHHHHTT-CCEEEEECC-----------CEEESCCTTCEEEEECSEESSCHHHHHHHHHHHHT
T ss_pred CCcEEEEeCcchHHHHHHHHHHhC-CCEEEEEEEeccccce--eEEEecccCCCCEEEEEecccCCCHHHHHHHHHHHHc
Confidence 478999999999999999999885 5555432222211111 1234456899999999999999999999999999999
Q ss_pred CCCCccEEEEE--EEeCHHHHHHHHHhCCCcEEEEEeecCCCC--CCC----eeecCCCchhhhccC
Q 022183 240 GVPESHIIFLN--LISAPEGIHCVCKRFPSLKIVTSEIDVALN--EEF----RVIPGLGEFGDRYFG 298 (301)
Q Consensus 240 g~~~~~I~~~~--~vas~~gl~~l~~~~p~v~i~t~~iD~~l~--~~~----~ivPGlGd~GdR~fg 298 (301)
|+ ++|.+++ .+.+..+++++.+...+--++|..+...-. .++ -+-|-++++-.|.++
T Consensus 244 Ga--~~V~~~~tH~v~~~~a~~~l~~~~i~~vv~t~tip~~~~~~~~k~~~~~va~~~a~ai~~~~~ 308 (317)
T 1dku_A 244 GA--KEVYACCTHPVLSGPAVERINNSTIKELVVTNSIKLPEEKKIERFKQLSVGPLLAEAIIRVHE 308 (317)
T ss_dssp TC--SEEEEECSEECCCTTHHHHHHTSSEEEEEEETTSCC----CCSSEEEECCHHHHHHHHHHHHH
T ss_pred CC--cEEEEEEECcccChHHHHHHhhCCCCEEEEeCCcCcchhhcCCCeEEEEhHHHHHHHHHHHhc
Confidence 98 6898888 455667999998767777788877743211 111 234555666666554
No 25
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=99.00 E-value=9.4e-10 Score=96.95 Aligned_cols=139 Identities=12% Similarity=0.205 Sum_probs=95.8
Q ss_pred CChhhhHhhHHHHHHHHHHHHhCCCCCeeeEeeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhc---c-CCeeee
Q 022183 114 ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACC---K-GIKIGK 189 (301)
Q Consensus 114 T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~V~tp~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~---p-~a~~G~ 189 (301)
.+..++.....+|+..+....-... +. + .++.++|++.++|.++...+.+.+ . ....++
T Consensus 28 ~~~~~i~~~~~~La~~i~~~~~~~~---------~~-----~---~~~~vvvgi~~gG~~~a~~la~~L~~~~~p~~~~~ 90 (211)
T 1pzm_A 28 VTQEQVWAATAKCAKKIAADYKDFH---------LT-----A---DNPLYLLCVLKGSFIFTADLARFLADEGVPVKVEF 90 (211)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHGGGT---------CB-----T---TBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eCHHHHHHHHHHHHHHHHHhccccc---------cc-----C---CCCCEEEEEccchHHHHHHHHHHHhhcCCCceeee
Confidence 5677888888888887765431111 00 0 124689999999999999998888 4 234665
Q ss_pred EEEE--ecC--CCC-ceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHh
Q 022183 190 ILIH--RDG--DNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKR 264 (301)
Q Consensus 190 i~i~--Rd~--~~~-~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~gl~~l~~~ 264 (301)
+... ++. .++ .+. ...++.+++|++|+|+||+++||+|+.++++.|+++|+ ++|.+++++..+++ .++ ..
T Consensus 91 i~~~~y~~~~~~~~~~~~-~~~~~~~v~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga--~~V~v~~l~~k~~~-~~~-~~ 165 (211)
T 1pzm_A 91 ICASSYGSGVETSGQVRM-LLDVRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKP--ASLKTVVLLDKPSG-RKV-DV 165 (211)
T ss_dssp EBCC-------------C-CBCCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCC--SEEEEEEEEECGGG-CSS-CC
T ss_pred EEeeeccCccccCCceEE-eccCCCCCCCCEEEEECCccccHHHHHHHHHHHHhcCC--CEEEEEEEEecCcc-CcC-CC
Confidence 5532 221 122 222 34567788999999999999999999999999999998 78999999999987 232 23
Q ss_pred CCCcEEEEEeec
Q 022183 265 FPSLKIVTSEID 276 (301)
Q Consensus 265 ~p~v~i~t~~iD 276 (301)
.| ..++-.++
T Consensus 166 ~~--d~~g~~ip 175 (211)
T 1pzm_A 166 LV--DYPVITIP 175 (211)
T ss_dssp CC--SEEEEECC
T ss_pred CC--CEEEEECC
Confidence 44 45555553
No 26
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=98.96 E-value=1.6e-09 Score=96.93 Aligned_cols=119 Identities=13% Similarity=0.092 Sum_probs=88.2
Q ss_pred CChhhhHhhHHHHHHHHHHHHhCCCCCeeeEeeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhcc----------
Q 022183 114 ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCK---------- 183 (301)
Q Consensus 114 T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~V~tp~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p---------- 183 (301)
.+..++.....+|+..+..+. + .+..++|+++++|.++...+.+.+.
T Consensus 50 ~~~~~i~~~~~~La~~i~~~~----~-------------------~~~~vVvgi~~gG~~~a~~la~~L~~~~~~~~~k~ 106 (233)
T 1fsg_A 50 LPGGLVKDRVEKLAYDIHRTY----F-------------------GEELHIICILKGSRGFFNLLIDYLATIQKYSGRES 106 (233)
T ss_dssp ECHHHHHHHHHHHHHHHHHHH----T-------------------TSCEEEEEEETTTHHHHHHHHHHHHHHHHHCSSCC
T ss_pred eCHHHHHHHHHHHHHHHHHHc----C-------------------CCCCEEEEEccCCHHHHHHHHHHhCCccccccccc
Confidence 456678888888887776442 0 0246899999999999888877664
Q ss_pred ---CCeeeeEEEEec--CCCCcee-EeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHH
Q 022183 184 ---GIKIGKILIHRD--GDNGKQL-IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEG 257 (301)
Q Consensus 184 ---~a~~G~i~i~Rd--~~~~~~~-~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~g 257 (301)
...++++...+. +.+..+. .....+.+++|++|||+||+++||+|+.++++.|+++|+ ++|.+++++..+++
T Consensus 107 ~~~P~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga--~~V~vavl~~k~~~ 184 (233)
T 1fsg_A 107 SVPPFFEHYVRLKSYQNDNSTGQLTVLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGP--KSMRIATLVEKRTD 184 (233)
T ss_dssp SSCSCEEEEEEEEEEETTEEEEEEEEECSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCC--SEEEEEEEEEECCT
T ss_pred CCCCcEEEEEEEEeccCccccccEEEecCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCC--CEEEEEEEEECCcc
Confidence 244777766443 2111122 223335678999999999999999999999999999998 78999999988877
No 27
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=98.93 E-value=3.7e-09 Score=92.44 Aligned_cols=124 Identities=22% Similarity=0.270 Sum_probs=86.4
Q ss_pred ChhhhHhhHHHHHHHHHHHHhCCCCCeeeEeeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhcc-----CCeeee
Q 022183 115 SKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCK-----GIKIGK 189 (301)
Q Consensus 115 ~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~V~tp~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p-----~a~~G~ 189 (301)
+..+|...+++|+..+.+..-...|. +. + .++.++|++.++|..+...+.+.+. ..+.+.
T Consensus 18 ~~~~i~~~i~~La~~i~~~~~~~~~~---------~~---~---~~~~vvvgi~~gG~~~a~~La~~L~~~~g~p~~~~~ 82 (201)
T 1w30_A 18 SAANVGRTISRIAHQIIEKTALDDPV---------GP---D---APRVVLLGIPTRGVTLANRLAGNITEYSGIHVGHGA 82 (201)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTTTSCC---------BT---T---BCCEEEEECTTHHHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHccccccc---------cc---c---CCCcEEEEEcccHHHHHHHHHHHHhHHHCCCcccce
Confidence 46678888888888777553211111 10 0 1357999999999999998888774 234555
Q ss_pred EEE--EecCCCC--c-eeEeecCCC-CCCCcEEEEEcccccchHHHHHHHHHHHHcC-CCCccEEEEEEEeCH
Q 022183 190 ILI--HRDGDNG--K-QLIYEKLPN-DISERHVLLLDPVLATGNSANQAIQLLIEKG-VPESHIIFLNLISAP 255 (301)
Q Consensus 190 i~i--~Rd~~~~--~-~~~y~~lP~-~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g-~~~~~I~~~~~vas~ 255 (301)
+.. +|++.+. . ...+..+|. +++|++|+|+||+++||+|+.++++.|++.| + ++|.+++++..+
T Consensus 83 l~~~~y~~~~~~~~~~~~~~~~~~~~~~~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a--~~V~vavlv~k~ 153 (201)
T 1w30_A 83 LDITLYRDDLMIKPPRPLASTSIPAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRP--RAVQLAVLVDRG 153 (201)
T ss_dssp CCCGGGCC--------CCCCCBCCTTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCC--SEEEEEEEEECC
T ss_pred EEEEEecCCccccccceeecccCCCccCCCCEEEEECCccchHHHHHHHHHHHHhCCCC--cEEEEEEEEecC
Confidence 443 2332211 1 223445664 4899999999999999999999999999999 6 789999888764
No 28
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=98.93 E-value=4.5e-10 Score=103.45 Aligned_cols=63 Identities=19% Similarity=0.331 Sum_probs=59.2
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccE------eecCCC
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADV------IIPRGG 64 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADi------ii~~~~ 64 (301)
+|++|||++|.++|+.||+.||..+||++.++++++|.+. .|.|++||+|+++.||+ ||++++
T Consensus 148 ~D~~IfV~a~~~~rl~Rrl~Rd~~~RG~s~e~v~~~i~~r-~~~~~r~i~p~~~~AD~~~~~~~vIDns~ 216 (290)
T 1a7j_A 148 ADLKIGVVPVINLEWIQKIHRDRATRGYTTEAVTDVILRR-MHAYVHCIVPQFSQTDINFQRVPVVDTSN 216 (290)
T ss_dssp CSEEEEEEECHHHHHHHHHHHTSSSCCSCCCCHHHHHHHH-HHHHHHHTGGGGGTCSEEEEEEESSCCSC
T ss_pred CCEEEEEECCHHHHHHHHhhhhhhhcCCChHHHHHHHHHh-CccHHHhhhhhhccCCEeeccCceecCCC
Confidence 5899999999999999999999999999999999999986 99999999999999999 777643
No 29
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=98.92 E-value=3.3e-09 Score=97.59 Aligned_cols=100 Identities=15% Similarity=0.180 Sum_probs=75.7
Q ss_pred cceeEEEecccchHHHHHHHHhccCCeeeeEEEEecCCCCceeEeecCCC-CCCCcEEEEEcccccchHHHHHHHHHHHH
Q 022183 160 KKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPN-DISERHVLLLDPVLATGNSANQAIQLLIE 238 (301)
Q Consensus 160 ~~i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~~~~~~y~~lP~-~i~~~~Vil~Dp~laTG~t~~~ai~~L~~ 238 (301)
++.++|++.++|..+...+.+.+ +++...+.-+|...+ ....+++. +++|++|+|+|||++||+|+.++++.|++
T Consensus 155 ~~~vVv~pd~Gg~~~a~~la~~l-~~p~~~i~k~r~~~~---~~~~~l~g~~v~Gk~VlIVDDii~TG~Tl~~aa~~Lk~ 230 (284)
T 1u9y_A 155 NDPIVLAPDKGALEFAKTASKIL-NAEYDYLEKTRLSPT---EIQIAPKTLDAKDRDVFIVDDIISTGGTMATAVKLLKE 230 (284)
T ss_dssp SSCEEEESSGGGHHHHHHHHHHH-TCCEEEBC-------------CCBSSCCCTTCCEEEEEEECSSSHHHHHHHHHHHH
T ss_pred CCcEEEEEcCChHHHHHHHHHHh-CCCEEEEEEEEcCCC---eEEEEecCccCCCCEEEEEecccCchHHHHHHHHHHHH
Confidence 35689999999999999988776 345544332332211 12344564 89999999999999999999999999999
Q ss_pred cCCCCccEEEEEE--EeCHHHHHHHHHhC
Q 022183 239 KGVPESHIIFLNL--ISAPEGIHCVCKRF 265 (301)
Q Consensus 239 ~g~~~~~I~~~~~--vas~~gl~~l~~~~ 265 (301)
+|+ ++|.+++. +.+.+|.++|.+..
T Consensus 231 ~Ga--~~V~~~~~h~v~s~~a~~~l~~~~ 257 (284)
T 1u9y_A 231 QGA--KKIIAACVHPVLIGDALNKLYSAG 257 (284)
T ss_dssp TTC--CSEEEEEEECCCCTTHHHHHHHHT
T ss_pred CCC--cEEEEEEEeEecCcHHHHHHHhCC
Confidence 998 68888886 78999999998863
No 30
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=98.91 E-value=6.1e-09 Score=89.76 Aligned_cols=117 Identities=16% Similarity=0.198 Sum_probs=87.9
Q ss_pred ChhhhHhhHHHHHHHHHHHHhCCCCCeeeEeeCCCCceeeeeeeccceeEEEecccchHHHHHHHHhcc-CCeeeeEEEE
Q 022183 115 SKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCK-GIKIGKILIH 193 (301)
Q Consensus 115 ~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~V~tp~g~~~~g~~~~~~i~~V~IlRaG~~m~~~l~~~~p-~a~~G~i~i~ 193 (301)
+..+.++.+.||++-+.+.- .| +++++|.|+++|..|+.-+.+.+. ...+.++.++
T Consensus 15 s~~~I~~~i~rlA~eI~e~~-------------------~~----~~~vlvgIl~Gg~~fa~~L~~~l~~~~~~~~i~~s 71 (181)
T 3acd_A 15 SAEAIKKRVEELGGEIARDY-------------------QG----KTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAIS 71 (181)
T ss_dssp CHHHHHHHHHHHHHHHHHHT-------------------TT----CCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHh-------------------CC----CCcEEEEEecCcHHHHHHHHHhcCCCccccceEEE
Confidence 44566677777776665421 12 257899999999999988888776 5678888887
Q ss_pred ecCCC----CceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHH
Q 022183 194 RDGDN----GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPE 256 (301)
Q Consensus 194 Rd~~~----~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~ 256 (301)
+.... +.......++.+++||+|+|+|+++.||.|+.++++.|+++|+ ++|.+++++--+.
T Consensus 72 sy~~~~~~~g~~~~~~~~~~~i~gk~VllVDDIldTG~Tl~~~~~~l~~~~p--~sv~~avLl~K~~ 136 (181)
T 3acd_A 72 SYGNAFKSSGEVELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKP--ASVRVAALLSKPS 136 (181)
T ss_dssp ------------CEEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCC--SEEEEEEEEECGG
T ss_pred EecCCcCCCCceEeccCCCcccCCCeeEEEEEEEcCchhHHHHHHHHhcCCC--CEEEEEEEEEcCc
Confidence 66431 2334456788899999999999999999999999999999998 7899999987654
No 31
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=98.90 E-value=1.2e-09 Score=96.01 Aligned_cols=119 Identities=9% Similarity=0.115 Sum_probs=85.8
Q ss_pred eeEEEecccchHHHHHHHHhccCCeeeeEEEEecCC-CCceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcC
Q 022183 162 LCGVSIVRSGESMENALRACCKGIKIGKILIHRDGD-NGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKG 240 (301)
Q Consensus 162 i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~-~~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g 240 (301)
-++|++..+|.++...+.+.+. .+. ..+.+... .+..-... ...++|++|+|+||+++||+|+.++++.|++.|
T Consensus 70 d~vv~v~~~g~~~a~~la~~l~-~p~--~~~rk~~~~~g~~~~i~--g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~G 144 (211)
T 2aee_A 70 EVIAGTATAGIPHGAIIADKMT-LPF--AYIRSKPKDHGAGNQIE--GRVLKGQKMVIIEDLISTGGSVLDAAAAASREG 144 (211)
T ss_dssp CEEEEETTTTHHHHHHHHHHHT-CCE--EEECSSCC----CCSEE--SCCCTTCEEEEEEEEESSCHHHHHHHHHHHHTT
T ss_pred CEEEEeccCcHHHHHHHHHHhC-CCE--EEEEeecCCcCCcceec--CCCCCcCEEEEEeecccchHHHHHHHHHHHHCC
Confidence 3677888899999888877653 333 22322211 11110111 135789999999999999999999999999999
Q ss_pred CCCccEEEEEEEe--CHHHHHHHHHh-CCCcEEEEE-eecCCCCCCCeeec
Q 022183 241 VPESHIIFLNLIS--APEGIHCVCKR-FPSLKIVTS-EIDVALNEEFRVIP 287 (301)
Q Consensus 241 ~~~~~I~~~~~va--s~~gl~~l~~~-~p~v~i~t~-~iD~~l~~~~~ivP 287 (301)
+ +.|.+++++. +++|.+++.+. +|.+.+++. .+++.+++++||.+
T Consensus 145 a--~~v~v~~l~~~~~~~~~~~l~~~~~~~~~l~~~~~i~~~l~~~~~i~~ 193 (211)
T 2aee_A 145 A--DVLGVVAIFTYELPKASQNFKEAGIKLITLSNYTELIAVAKLQGYITN 193 (211)
T ss_dssp C--EEEEEEEEEECCCHHHHHHHHHHTCCEEESCCHHHHHHHHHHHTSSCH
T ss_pred C--cEEEEEEEEecccccHHHHHHhCCCCEEEEeeHHHHHHHHHHcCCCCH
Confidence 8 6777777776 68999999765 776777776 68888888888754
No 32
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=98.90 E-value=5.1e-09 Score=98.02 Aligned_cols=113 Identities=18% Similarity=0.168 Sum_probs=86.4
Q ss_pred cceeEEEecccchHHHHHHHHhccCCeeeeEEEEecCCCCceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHc
Q 022183 160 KKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEK 239 (301)
Q Consensus 160 ~~i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~ 239 (301)
++.++|+...+|..+...+.+.+. ++++.+.-+|+.....+. ..+..+++||+|+|+|||++||+|+.++++.|++.
T Consensus 163 ~~~vVVspd~Ggv~~A~~lA~~L~-~~~~~i~K~r~~~~~v~~--~~l~g~v~gk~viIVDDii~TG~Tl~~a~~~L~~~ 239 (326)
T 3s5j_B 163 RNCTIVSPDAGGAKRVTSIADRLN-VDFALIHKERKKANEVDR--MVLVGDVKDRVAILVDDMADTCGTICHAADKLLSA 239 (326)
T ss_dssp GGCEEEESSGGGHHHHHHHHHHHT-CEEEEEEEC-------CC--EEEESCCTTSEEEEEEEEESSCHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCchHHHHHHHHHcC-CCEEEEEEEecCCCeeeE--EeccccCCCCEEEEEccccCCcHHHHHHHHHHHHc
Confidence 468999999999999998888763 555544433322111111 23567899999999999999999999999999999
Q ss_pred CCCCccEEEEEE--EeCHHHHHHHHHhCCCcEEEEEeecC
Q 022183 240 GVPESHIIFLNL--ISAPEGIHCVCKRFPSLKIVTSEIDV 277 (301)
Q Consensus 240 g~~~~~I~~~~~--vas~~gl~~l~~~~p~v~i~t~~iD~ 277 (301)
|+ ++|.+++. +.+++|+++|.+...+--++|..|..
T Consensus 240 Ga--~~v~~~~tH~v~~~~a~e~l~~~~i~~vv~t~tip~ 277 (326)
T 3s5j_B 240 GA--TRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQ 277 (326)
T ss_dssp TC--SEEEEEEEEECCCTTHHHHHHHSCCSEEEEETTSCC
T ss_pred CC--CEEEEEEEecccCchHHHHHhhCCCCEEEEecCCCC
Confidence 99 68888884 77999999999876676777877754
No 33
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=98.87 E-value=7.9e-09 Score=88.46 Aligned_cols=114 Identities=24% Similarity=0.334 Sum_probs=77.4
Q ss_pred ceeEEEecccchHHHHHHHHhcc-----CCeeeeEEEE--ecCCC--C--ceeEeecCCCCCCCcEEEEEcccccchHHH
Q 022183 161 KLCGVSIVRSGESMENALRACCK-----GIKIGKILIH--RDGDN--G--KQLIYEKLPNDISERHVLLLDPVLATGNSA 229 (301)
Q Consensus 161 ~i~~V~IlRaG~~m~~~l~~~~p-----~a~~G~i~i~--Rd~~~--~--~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~ 229 (301)
+.++||+.++|..+...+.+.+. ....+.+... +++.+ + .......++.+++|++|+|+||+++||+|+
T Consensus 33 ~~~iv~v~~rG~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~Tl 112 (181)
T 1ufr_A 33 GLALVGIHTRGIPLAHRIARFIAEFEGKEVPVGVLDITLYRDDLTEIGYRPQVRETRIPFDLTGKAIVLVDDVLYTGRTA 112 (181)
T ss_dssp TEEEEEETTTHHHHHHHHHHHHHHHHCSCCCEEEEEEEC-----------CEEEEEEECSCCTTCEEEEEEEEESSSHHH
T ss_pred CeEEEEECCCChHHHHHHHHHHhHHhCCCcccCeEEEEEecCccccccccceecccccCcCCCCCEEEEEecCCCcHHHH
Confidence 46889999999999988877664 3445555442 22211 1 122234566788999999999999999999
Q ss_pred HHHHHHHHHcC-CCCccEEEEEEEeCHHHHHHHHHhCCCcEEEEEeecCCCCC
Q 022183 230 NQAIQLLIEKG-VPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 281 (301)
Q Consensus 230 ~~ai~~L~~~g-~~~~~I~~~~~vas~~gl~~l~~~~p~v~i~t~~iD~~l~~ 281 (301)
.++++.|++.| + ++|.+++++..+. +-....|+ .++..++...++
T Consensus 113 ~~a~~~L~~~G~a--~~V~~~~l~~~~~---~~~~~~~d--~~g~~i~~~~~~ 158 (181)
T 1ufr_A 113 RAALDALIDLGRP--RRIYLAVLVDRGH---RELPIRAD--FVGKNVPTSRSE 158 (181)
T ss_dssp HHHHHHHHHHCCC--SEEEEEEEEECCC---CSSSBCCS--EEEEECCCCTTC
T ss_pred HHHHHHHHhcCCC--cEEEEEEEEcCCC---CcCCccCc--EEEEeCCCCccC
Confidence 99999999999 6 6899888887761 11112343 555555555443
No 34
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=98.86 E-value=5.2e-09 Score=89.47 Aligned_cols=93 Identities=24% Similarity=0.315 Sum_probs=70.3
Q ss_pred ceeEEEecccchHHHHHHHHhcc-----CCeeeeEEEEec--CCC----C--ceeEeecCCCCCCCcEEEEEcccccchH
Q 022183 161 KLCGVSIVRSGESMENALRACCK-----GIKIGKILIHRD--GDN----G--KQLIYEKLPNDISERHVLLLDPVLATGN 227 (301)
Q Consensus 161 ~i~~V~IlRaG~~m~~~l~~~~p-----~a~~G~i~i~Rd--~~~----~--~~~~y~~lP~~i~~~~Vil~Dp~laTG~ 227 (301)
..++|++.++|..+...+.+.+. ...++++...+. +.+ . .......++.+++|++|+|+||+++||+
T Consensus 33 ~~~iv~i~~~G~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~ 112 (181)
T 1a3c_A 33 NCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTSNDEPLVKGADIPVDITDQKVILVDDVLYTGR 112 (181)
T ss_dssp -CEEEEESHHHHHHHHHHHHHHHHHHSSCCEEEEEEEECCC--------CCCCEEEEEECSSCCTTSEEEEEEEEESSSH
T ss_pred CeEEEEEcCCCHHHHHHHHHHHhHHhCCCcccCeEEEEEecCcccccCccceeeecccccCcCCCCCEEEEEeCccCcHH
Confidence 45789999999999988887765 245666655332 211 1 1223345677889999999999999999
Q ss_pred HHHHHHHHHHHcC-CCCccEEEEEEEeCH
Q 022183 228 SANQAIQLLIEKG-VPESHIIFLNLISAP 255 (301)
Q Consensus 228 t~~~ai~~L~~~g-~~~~~I~~~~~vas~ 255 (301)
|+.++++.|++.| + ++|.+++++..+
T Consensus 113 Tl~~a~~~L~~~G~a--~~V~~~~l~~k~ 139 (181)
T 1a3c_A 113 TVRAGMDALVDVGRP--SSIQLAVLVDRG 139 (181)
T ss_dssp HHHHHHHHHHHHCCC--SEEEEEEEEECC
T ss_pred HHHHHHHHHHhcCCC--cEEEEEEEEccC
Confidence 9999999999997 7 689888888665
No 35
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=98.86 E-value=7.2e-09 Score=96.78 Aligned_cols=113 Identities=17% Similarity=0.158 Sum_probs=79.8
Q ss_pred cceeEEEecccchHHHHHHHHhccCCeeeeEEEEecCCCCceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHc
Q 022183 160 KKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEK 239 (301)
Q Consensus 160 ~~i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~ 239 (301)
++.++|+...+|..+...+.+.+ ++++..+.-+|... + ......++.+++|++|+|+|||++||+|+.++++.|+++
T Consensus 166 ~~~vVVspd~Ggv~~A~~lA~~L-~~p~~~i~K~r~~~-~-~v~~~~i~g~v~gk~viiVDDii~TG~Tl~~a~~~L~~~ 242 (319)
T 3dah_A 166 PDLLVVSPDVGGVVRARALAKQL-NCDLAIIDKRRPKA-N-VAEVMNIIGEVEGRTCVIMDDMVDTAGTLCKAAQVLKER 242 (319)
T ss_dssp TTEEEECCSSTTHHHHHHHHHHT-TCEEEC----------------------CCSEEEEEEEEESSCHHHHHHHHHHHHT
T ss_pred CCcEEEEeCCCccHHHHHHHHHh-CCCEEEEEEEeccC-C-ceEEEEccccCCCCEEEEEecccCchHHHHHHHHHHHHc
Confidence 47899999999999999988887 45565543333221 1 111245677899999999999999999999999999999
Q ss_pred CCCCccEEEEEE--EeCHHHHHHHHHhCCCcEEEEEeecC
Q 022183 240 GVPESHIIFLNL--ISAPEGIHCVCKRFPSLKIVTSEIDV 277 (301)
Q Consensus 240 g~~~~~I~~~~~--vas~~gl~~l~~~~p~v~i~t~~iD~ 277 (301)
|+ ++|.+++. +.+++|+++|.+...+--++|..|..
T Consensus 243 Ga--~~v~~~~tH~v~s~~a~~~l~~~~i~~vv~t~tip~ 280 (319)
T 3dah_A 243 GA--KQVFAYATHPVLSGGAADRIAASALDELVVTDTIPL 280 (319)
T ss_dssp TC--SCEEEEEEEECCCTTHHHHHHTSSCSEEEEESSSCC
T ss_pred CC--CEEEEEEEeecCChHHHHHHHhCCCCEEEEeccccC
Confidence 99 68888884 67899999998766666677777754
No 36
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=98.85 E-value=1.2e-09 Score=102.15 Aligned_cols=68 Identities=22% Similarity=0.293 Sum_probs=58.6
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCC---CH----------------HHHHHHHHhhccchhHhhcccccccccEeec
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGR---DV----------------DSVLEQYAKFVKPAFDDFVLPSKKYADVIIP 61 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~---~~----------------~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~ 61 (301)
+|++||||+|.|+|+.|++.||..+||. ++ +...++|.+..+|.+++||.|+++.||+|++
T Consensus 227 ~D~~I~Vda~~d~~~~R~i~Rd~~~r~~a~~~~~s~~~~y~~~s~~ea~~~a~~~w~~~~~pn~~~~I~ptr~~Adlil~ 306 (321)
T 3tqc_A 227 FDFSLFVDAQAQVIQKWYIDRVLSFWRTTFKDPHSYFHYLTQMSETEVAAFAKHVWNEINKVNLMENILPYKNRAQLILE 306 (321)
T ss_dssp CSEEEEEECCHHHHHHHHHHHHHHHHHTGGGSTTSTTGGGGGSCHHHHHHHHHHHHHHTHHHHHHHHTGGGGGGCSEEEE
T ss_pred cCeEEEEECCHHHHHHHHHHhcchhhhhhccChHHHHHHHhcCCHHHHHHHHHHHHHhccccCHHHhCccCccCceEEEe
Confidence 6999999999999999999999998872 22 2345667777789999999999999999999
Q ss_pred CCCCCch
Q 022183 62 RGGDNHV 68 (301)
Q Consensus 62 ~~~~~~~ 68 (301)
.+.++.+
T Consensus 307 ~g~~~~v 313 (321)
T 3tqc_A 307 KAADHSI 313 (321)
T ss_dssp ECTTSCE
T ss_pred cCCCCcE
Confidence 9998864
No 37
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=98.78 E-value=3.4e-09 Score=98.08 Aligned_cols=67 Identities=15% Similarity=0.263 Sum_probs=58.5
Q ss_pred CCeEEEEeCCchhHHHHHhhhcccc---------------CCCCHHH----HHHHHHhhccchhHhhcccccccccEeec
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVE---------------RGRDVDS----VLEQYAKFVKPAFDDFVLPSKKYADVIIP 61 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~e---------------rg~~~~~----v~~~~~~~~~p~~~~~i~P~~~~ADiii~ 61 (301)
+|++|||++|.++++.|+++||... +|.+.++ +.+||.+.++|++++||+|+++.||+||+
T Consensus 215 ~D~~i~V~~~~~~~~~R~~~R~~~~r~~~~r~~~~~~~~~~g~s~e~a~~~i~~q~~~~~~~~~~~~i~~~~~~AD~vI~ 294 (308)
T 1sq5_A 215 VDFSIYVDAPEDLLQTWYINRFLKFREGAFTDPDSYFHNYAKLTKEEAIKTAMTLWKEINWLNLKQNILPTRERASLILT 294 (308)
T ss_dssp CSEEEEEECCHHHHHHHHHHHHHHHHHTTTTCTTSTTHHHHTSCHHHHHHHHHHHHHHTHHHHHHHTTGGGGGGCSEEEE
T ss_pred CCEEEEEECCHHHHHHHHHHHHHHHHHhhccCCchhhhcccCCCHHHHHHHHHHHHHhccHHHHHHHcccccccCcEEEE
Confidence 6899999999999999999998542 3777775 66788888999999999999999999999
Q ss_pred CCCCCc
Q 022183 62 RGGDNH 67 (301)
Q Consensus 62 ~~~~~~ 67 (301)
+++++.
T Consensus 295 n~~~~~ 300 (308)
T 1sq5_A 295 KSANHA 300 (308)
T ss_dssp ECGGGC
T ss_pred eCCCCc
Confidence 877664
No 38
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=98.74 E-value=2.9e-08 Score=94.78 Aligned_cols=114 Identities=14% Similarity=0.154 Sum_probs=83.6
Q ss_pred cceeEEEecccchHHHHHHHHhccCCeeeeEEEEecCC-----CC----cee--------------------EeecCCCC
Q 022183 160 KKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGD-----NG----KQL--------------------IYEKLPND 210 (301)
Q Consensus 160 ~~i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~-----~~----~~~--------------------~y~~lP~~ 210 (301)
++.++|++.++|.+++..+.+.+. ++.+.+..+|... ++ +.. .-..++.+
T Consensus 191 ~~~vVV~pd~GGv~~A~~lA~~L~-~pl~ii~k~r~~~~~e~~~gr~~~~~v~~~~~~~~g~~i~~~~~~~~~~~~l~g~ 269 (379)
T 2ji4_A 191 RNAVIVAKSPASAKRAQSFAERLR-LGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKPPITVVGD 269 (379)
T ss_dssp GGEEEEESSGGGHHHHHHHHHHTT-CEEEEEC-----------------------------------------CCCEESC
T ss_pred CCcEEEEEccchHHHHHHHHHHhC-CCEEEEEEEeecccccccccccCCcccccccccccccchhhhhhhcccccccccC
Confidence 368999999999999999988874 5565554444320 00 100 01235568
Q ss_pred CCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEE--EEeCHHHHHHHHHhCCCcEEEEEeec
Q 022183 211 ISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLN--LISAPEGIHCVCKRFPSLKIVTSEID 276 (301)
Q Consensus 211 i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~--~vas~~gl~~l~~~~p~v~i~t~~iD 276 (301)
++|++|||+|||++||+|+.+|++.|+++|+ ++|.+++ .+.++++.++|.+...+--++|-.+.
T Consensus 270 v~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga--~~v~~~~tH~v~s~~a~~~l~~s~id~vvvTntip 335 (379)
T 2ji4_A 270 VGGRIAIIVDDIIDDVDSFLAAAETLKERGA--YKIFVMATHGLLSSDAPRRIEESAIDEVVVTNTIP 335 (379)
T ss_dssp CTTSEEEEEEEEECSCHHHHHHHHHHHHTTC--CEEEEEEEEECCCTTHHHHHHHSSCCEEEEESSSC
T ss_pred CCCCEEEEEecCCCchHHHHHHHHHHHhcCC--CEEEEEEEeecCCcHHHHHHHhCCCCEEEEecCCC
Confidence 9999999999999999999999999999999 6888777 47799999999876556667776663
No 39
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=98.70 E-value=1.4e-08 Score=94.51 Aligned_cols=68 Identities=13% Similarity=0.293 Sum_probs=58.9
Q ss_pred CCeEEEEeCCchhHHHHHhhhcccc-----C----------CCCHHHHH----HHHHhhccchhHhhcccccccccEeec
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVE-----R----------GRDVDSVL----EQYAKFVKPAFDDFVLPSKKYADVIIP 61 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~e-----r----------g~~~~~v~----~~~~~~~~p~~~~~i~P~~~~ADiii~ 61 (301)
+|++|||++|.++++.|++.|++.. | |.+.++++ +||.+.++|++++||+|+++.||+||+
T Consensus 218 ~D~~I~V~a~~~~~~~R~i~R~~~~rd~~~r~~~~~~~~~~g~s~e~a~~~v~~~~~~~~~p~~~~~i~p~~~~ADlii~ 297 (312)
T 3aez_A 218 FDFSLYVDARIEDIEQWYVSRFLAMRTTAFADPESHFHHYAAFSDSQAVVAAREIWRTINRPNLVENILPTRPRATLVLR 297 (312)
T ss_dssp CSEEEEEEECHHHHHHHHHHHHHHHTTTGGGSTTSTTGGGTTCCHHHHHHHHHHHHHHTHHHHHHHTTGGGGGGCSEEEE
T ss_pred cCcEEEEECCHHHHHHHHHHHHHHHHhccccCcchhhhcccCCCHHHHHHHHHHHHHhccHHHHHHhccCCCCCCeEEEe
Confidence 6899999999999999999986543 2 67777766 788899999999999999999999999
Q ss_pred CCCCCch
Q 022183 62 RGGDNHV 68 (301)
Q Consensus 62 ~~~~~~~ 68 (301)
++.++.+
T Consensus 298 ~~~~~~v 304 (312)
T 3aez_A 298 KDADHSI 304 (312)
T ss_dssp ECTTSCE
T ss_pred cCCCCce
Confidence 9877753
No 40
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=98.70 E-value=1.9e-08 Score=89.95 Aligned_cols=83 Identities=66% Similarity=1.081 Sum_probs=73.3
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhh
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (301)
+|++||+++|.++++.|+..||..+||++.+++.++|....++.|.+|++|.++.||+||++.-+|...++.+.+.|.+.
T Consensus 151 ~d~vi~l~~~~e~~~~R~~~R~~~~rg~~~e~i~~~~~~~~~~~~~~~i~~~~~~ad~vI~~~id~~~s~e~v~~~I~~~ 230 (252)
T 1uj2_A 151 FQMKLFVDTDADTRLSRRVLRDISERGRDLEQILSQYITFVKPAFEEFCLPTKKYADVIIPRGADNLVAINLIVQHIQDI 230 (252)
T ss_dssp CSEEEEEECCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHTHHHHHHHHTGGGGGGCSEEEETGGGCHHHHHHHHHHHHHH
T ss_pred cCeeEEEeCCHHHHHHHHHHHHHhhhCCCHHHHHHHHHHhccHHHHHHhhhhhhcCcEEEecCCCChhHHHHHHHHHHHH
Confidence 58999999999999999999998889999999999999989999999999999999999965555566778888888777
Q ss_pred ccc
Q 022183 81 LGQ 83 (301)
Q Consensus 81 l~~ 83 (301)
+.+
T Consensus 231 l~~ 233 (252)
T 1uj2_A 231 LNG 233 (252)
T ss_dssp HHC
T ss_pred Hcc
Confidence 654
No 41
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*
Probab=98.69 E-value=7e-08 Score=85.59 Aligned_cols=96 Identities=21% Similarity=0.199 Sum_probs=71.7
Q ss_pred ceeEEEecccchHHHHHHHHhcc-----CCeeeeEEEEecC--C--------CCce-e--Eeec---CCCCCCCcEEEEE
Q 022183 161 KLCGVSIVRSGESMENALRACCK-----GIKIGKILIHRDG--D--------NGKQ-L--IYEK---LPNDISERHVLLL 219 (301)
Q Consensus 161 ~i~~V~IlRaG~~m~~~l~~~~p-----~a~~G~i~i~Rd~--~--------~~~~-~--~y~~---lP~~i~~~~Vil~ 219 (301)
+.++|+|+++|.++...+.+.+. ..+++++.+.... . .+.. . .+.. ++.+++|++|||+
T Consensus 30 ~~vIVgI~~GG~~~A~~La~~L~~~~~~~lpi~~i~~s~y~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~Gk~VLIV 109 (221)
T 2xbu_A 30 PDLIIAIGGGGFIPARILRTFLKEPGVPTIRIFAIILSLYEDLNSVGSEVEEVGVKVSRTQWIDYEQCKLDLVGKNVLIV 109 (221)
T ss_dssp CSEEEEEHHHHHHHHHHHHHHHCCTTSCCCEEEEEEEEEEC-------------CEEEEEECCCHHHHTCCCTTCEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHhCCCCCCCccEEEEEEEEecCCccccccccccCceeeeeeeeecccccccCCCCEEEEE
Confidence 35799999999999999888773 4578887654332 1 1111 1 1122 4678999999999
Q ss_pred cccccchHHHHHHHHHHHH--------cCCC-------CccEEEEEEEeCHH
Q 022183 220 DPVLATGNSANQAIQLLIE--------KGVP-------ESHIIFLNLISAPE 256 (301)
Q Consensus 220 Dp~laTG~t~~~ai~~L~~--------~g~~-------~~~I~~~~~vas~~ 256 (301)
||+++||+|+.++++.|++ +|+. +++|.+++++--+.
T Consensus 110 DDIidTG~Tl~aa~~~L~~~ga~~~~~~g~~~~~~~~~~~~v~iavL~~K~~ 161 (221)
T 2xbu_A 110 DEVDDTRTTLHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGIFVLHDKQK 161 (221)
T ss_dssp EEEESSSHHHHHHHHHHHHHHHHHHHHTTCCTTTCGGGSCEEEEEEEEEECS
T ss_pred eccCCcHHHHHHHHHHHHhhcchhhhhcCccccccccCcceEEEEEEEeccc
Confidence 9999999999999999997 7873 36899999987553
No 42
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=98.66 E-value=2e-07 Score=85.80 Aligned_cols=111 Identities=20% Similarity=0.147 Sum_probs=80.2
Q ss_pred cceeEEEecccchHHHHHHHHhccCCeeeeEEEEecCCCCceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHc
Q 022183 160 KKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEK 239 (301)
Q Consensus 160 ~~i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~ 239 (301)
++.++|++..+|..+...+.+.+. .+...+.=+|. .++ ......+..+++|++|+|+||+++||+|+.++++.|++.
T Consensus 153 ~~~vVV~pd~Gg~~~A~~lA~~L~-~p~~~i~K~r~-~~g-~v~i~~~~~dv~gk~vliVDDii~TG~Tl~~a~~~L~~~ 229 (286)
T 3lrt_A 153 DVDYVVSPDDGGLARVADISAKLG-KKHFFIEKKRI-DDR-TVEMKVPNVDVNGKKLLIVDDIISTGGTIAKSSGLLREK 229 (286)
T ss_dssp CCSEEEESSSSSHHHHHHHHHHHT-CEEEEEEEEEE-TTE-EEEEEESCCCCTTCEEEEEEEEESSCHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCccHHHHHHHHHhC-CCeEEEeeeec-CCC-cEEEeeccccCCcCEEEEEeccccccHHHHHHHHHHHhC
Confidence 467899999999999998888763 44544443442 222 122233456789999999999999999999999999999
Q ss_pred CCCCccEEEEEE--EeCHHHHHHHHHhCCCcEEEEEeec
Q 022183 240 GVPESHIIFLNL--ISAPEGIHCVCKRFPSLKIVTSEID 276 (301)
Q Consensus 240 g~~~~~I~~~~~--vas~~gl~~l~~~~p~v~i~t~~iD 276 (301)
|+ +.|.+++. +.+..|.++| +..-+--++|-.|.
T Consensus 230 Ga--~~v~~~~th~v~s~~a~~~l-~s~i~~vv~Tntip 265 (286)
T 3lrt_A 230 GA--SKIYVSAVHGLFVNGSENKI-LQNADEIHVTDTVE 265 (286)
T ss_dssp TC--SEEEEEEEEECCCTTHHHHH-TTTCSEEEEESSSC
T ss_pred CC--CEEEEEEEEeecCchHHHHH-HcCCCEEEEecCCC
Confidence 99 67888885 4588999999 43222234444443
No 43
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=98.60 E-value=2.9e-08 Score=86.11 Aligned_cols=60 Identities=15% Similarity=0.123 Sum_probs=55.0
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecC
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPR 62 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~ 62 (301)
+|++||||+|.++|+.|.+.|+. +||++.+++.++|.+...|++ +|++|++++||+||+.
T Consensus 148 ~d~~i~vd~~~~~~~~R~~~R~~-~~g~t~~~~~~~~~~~~~~~~-~~i~~~~~~aD~vi~~ 207 (208)
T 3c8u_A 148 WDVSIRLEVPMADLEARLVQRWL-DHGLNHDAAVARAQGNDLANA-RAIEAARLPADLTWPQ 207 (208)
T ss_dssp CSEEEEECCCHHHHHHHHHHHHH-HTTCCHHHHHHHHHTHHHHHH-HHHHTTBCCCSEEEC-
T ss_pred cCEEEEEeCCHHHHHHHHHHHHH-hcCCCHHHHHHHHHhccHHHH-HHHHhCCCCCCEEeeC
Confidence 58999999999999999999974 799999999999998889977 8999999999999975
No 44
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=98.52 E-value=8.9e-07 Score=76.52 Aligned_cols=96 Identities=20% Similarity=0.167 Sum_probs=67.2
Q ss_pred eEEEecccchHHHHHHHHhccCCeeeeEEEEecCCCC----c--------------eeEeecCCCCCCCcEEEEEccccc
Q 022183 163 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNG----K--------------QLIYEKLPNDISERHVLLLDPVLA 224 (301)
Q Consensus 163 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~~----~--------------~~~y~~lP~~i~~~~Vil~Dp~la 224 (301)
++||+.++|..+...+.+.+. .+. +.+ |...+. . ......-+...+|++|+|+||+++
T Consensus 56 ~Iv~v~~rG~~~a~~la~~l~-~p~--~~~-rk~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VllVDDvit 131 (197)
T 1y0b_A 56 KIVTIESSGIAPAVMTGLKLG-VPV--VFA-RKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDFLA 131 (197)
T ss_dssp EEEEETTTTHHHHHHHHHHHT-CCE--EEE-BSSCCSSCCSSEEEEEEEETTTTEEEEEEEEGGGCCTTCEEEEEEEEES
T ss_pred EEEEEcccCHHHHHHHHHHhC-CCE--EEE-EecCCCCCCCceEEEeeeccccCceEEEEEeccccCCcCEEEEEEcccc
Confidence 677788999999888877653 222 222 222211 1 011111112357999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCccEEEEEEEeCH--HHHHHHHHh
Q 022183 225 TGNSANQAIQLLIEKGVPESHIIFLNLISAP--EGIHCVCKR 264 (301)
Q Consensus 225 TG~t~~~ai~~L~~~g~~~~~I~~~~~vas~--~gl~~l~~~ 264 (301)
||+|+.++++.|++.|+ +.|.+++++..+ .|.++|.+.
T Consensus 132 TG~Tl~~a~~~L~~~Ga--~~V~~~~l~~~~~~~~~~~l~~~ 171 (197)
T 1y0b_A 132 NGQAAHGLVSIVKQAGA--SIAGIGIVIEKSFQPGRDELVKL 171 (197)
T ss_dssp SCHHHHHHHHHHHHTTC--EEEEEEEEEEETTSTHHHHHHHT
T ss_pred cCHHHHHHHHHHHHCCC--EEEEEEEEEEecccchhhhHHhc
Confidence 99999999999999998 678888887765 788888764
No 45
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=98.50 E-value=8.2e-07 Score=75.67 Aligned_cols=95 Identities=18% Similarity=0.150 Sum_probs=66.8
Q ss_pred eeEEEecccchHHHHHHHHhccCCeeeeEEEEecCCCC--------------ceeEeecCCCCCCCcEEEEEcccccchH
Q 022183 162 LCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNG--------------KQLIYEKLPNDISERHVLLLDPVLATGN 227 (301)
Q Consensus 162 i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~~--------------~~~~y~~lP~~i~~~~Vil~Dp~laTG~ 227 (301)
-++|++.++|.++...+.+.+. .+. +.+++ ..+. ...+...-+..++|++|+|+||+++||+
T Consensus 59 d~vv~v~~~G~~~a~~la~~l~-~p~--~~~r~-~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~ 134 (180)
T 1zn8_A 59 DYIAGLDSRGFLFGPSLAQELG-LGC--VLIRK-RGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGG 134 (180)
T ss_dssp CEEEEETTTHHHHHHHHHHHHT-CEE--EEEEE-TTCCCSSEEEEEEEETTEEEEEEEETTSSCTTCEEEEEEEEESSSH
T ss_pred CEEEEECCCchHHHHHHHHHhC-CCE--EEEEe-cCCCCcccccHHHHHhcCccEEEEeccccCCCCEEEEEcCCcccHH
Confidence 3677778899998888877663 333 22332 2221 1111222233368999999999999999
Q ss_pred HHHHHHHHHHHcCCCCccEEEEEEEeCH--HHHHHHH
Q 022183 228 SANQAIQLLIEKGVPESHIIFLNLISAP--EGIHCVC 262 (301)
Q Consensus 228 t~~~ai~~L~~~g~~~~~I~~~~~vas~--~gl~~l~ 262 (301)
|+.++++.|++.|+ +.|.+++++..+ +|.+++.
T Consensus 135 Tl~~~~~~L~~~Ga--~~v~~~~l~~~~~~~~~~~l~ 169 (180)
T 1zn8_A 135 TMNAACELLGRLQA--EVLECVSLVELTSLKGREKLA 169 (180)
T ss_dssp HHHHHHHHHHHTTC--EEEEEEEEEEEGGGCHHHHHT
T ss_pred HHHHHHHHHHHcCC--EEEEEEEEEEccCcchhhhhc
Confidence 99999999999998 678888887665 5788774
No 46
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=98.45 E-value=8.6e-07 Score=76.34 Aligned_cols=103 Identities=15% Similarity=0.102 Sum_probs=68.5
Q ss_pred eEEEecccchHHHHHHHHhccCCeeeeEEEEecCCCC--------------ceeEeecCCCCCCCcEEEEEcccccchHH
Q 022183 163 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNG--------------KQLIYEKLPNDISERHVLLLDPVLATGNS 228 (301)
Q Consensus 163 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~~--------------~~~~y~~lP~~i~~~~Vil~Dp~laTG~t 228 (301)
++|++.+.|..+...+.+.+. .+. +.+ |...+. ...+..+-....+|++|+|+||+++||+|
T Consensus 66 ~Iv~v~~rG~~~a~~la~~l~-~p~--~~~-rk~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLlVDDvitTG~T 141 (190)
T 2dy0_A 66 KVVGTEARGFLFGAPVALGLG-VGF--VPV-RKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGT 141 (190)
T ss_dssp EEEEETTHHHHHHHHHHHHHT-CEE--EEE-BSTTCCCSCEEEEEEEETTEEEEEEEEGGGCCTTCEEEEEEEEESSCHH
T ss_pred EEEEECcccHHHHHHHHHHHC-CCE--EEE-EecCCCCcccccceehhhcCceEEEEeccccCCcCEEEEEEccccchHH
Confidence 567777888888877776652 222 222 322221 11111111223579999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEEEEEEeCH--HHHHHHHHhCCCcEEEEE
Q 022183 229 ANQAIQLLIEKGVPESHIIFLNLISAP--EGIHCVCKRFPSLKIVTS 273 (301)
Q Consensus 229 ~~~ai~~L~~~g~~~~~I~~~~~vas~--~gl~~l~~~~p~v~i~t~ 273 (301)
+.++++.|++.|+ +.|.+++++..+ .|.++|.+. .+.+++.
T Consensus 142 l~~a~~~L~~~Ga--~~V~~~~l~~~~~~~~~~~l~~~--g~~v~sl 184 (190)
T 2dy0_A 142 IEATVKLIRRLGG--EVADAAFIINLFDLGGEQRLEKQ--GITSYSL 184 (190)
T ss_dssp HHHHHHHHHHTTC--EEEEEEEEEEEGGGCHHHHHHTT--TCEEEEE
T ss_pred HHHHHHHHHHcCC--EEEEEEEEEEccCcchHHHHhhC--CCcEEEE
Confidence 9999999999998 678888877665 488888542 3555543
No 47
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=98.40 E-value=1.1e-06 Score=75.19 Aligned_cols=104 Identities=16% Similarity=0.211 Sum_probs=68.9
Q ss_pred eeEEEecccchHHHHHHHHhccCCeeeeEEEEecCCC--CceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHc
Q 022183 162 LCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDN--GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEK 239 (301)
Q Consensus 162 i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~--~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~ 239 (301)
-++|++..+|.++...+.+.+. .++..+.+ |...+ +...... ...++|++|+|+||+++||+|+.++++.|++.
T Consensus 65 d~vv~v~~gG~~~a~~la~~l~-~~~~~~~~-rk~~~~~g~~~~~~--g~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ 140 (180)
T 2p1z_A 65 VAVGGLTLGADPVATSVMHADG-REIHAFVV-RKEAKKHGMQRRIE--GPDVVGKKVLVVEDTTTTGNSPLTAVKALREA 140 (180)
T ss_dssp SEEEEETTTHHHHHHHHHHSSS-SCCEEEEE-CSCCC-CC-CCSEE--SSCCTTCEEEEEEEECSSSHHHHHHHHHHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHHC-CCCCeEEE-Eeccccccchhhcc--CCCCCcCEEEEEEeccCCcHHHHHHHHHHHHc
Confidence 3688888899999998888663 22333333 33321 1110011 12368999999999999999999999999999
Q ss_pred CCCCccEEEEEEEeCH-HHHHHHHHhCCCcEEEEE
Q 022183 240 GVPESHIIFLNLISAP-EGIHCVCKRFPSLKIVTS 273 (301)
Q Consensus 240 g~~~~~I~~~~~vas~-~gl~~l~~~~p~v~i~t~ 273 (301)
|+ +.|.+++++.-+ .|.+++.+ + ++.+++.
T Consensus 141 Ga--~~v~~~~l~~~~~~g~~~l~~-~-g~~~~sl 171 (180)
T 2p1z_A 141 GA--EVVGVATVVDRATGAADVIAA-E-GLEYRYI 171 (180)
T ss_dssp TC--EEEEEEEEEC-CCCHHHHHHT-T-TCCEEEE
T ss_pred CC--eEEEEEEEEEcCcchHHHHHh-c-CCeEEEE
Confidence 98 678888877554 44555542 2 3444443
No 48
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=98.40 E-value=1.9e-06 Score=74.05 Aligned_cols=96 Identities=24% Similarity=0.197 Sum_probs=66.4
Q ss_pred eEEEecccchHHHHHHHHhccCCeeeeEEEEecCC-------------CC-ceeEeecCCCCCCCcEEEEEcccccchHH
Q 022183 163 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGD-------------NG-KQLIYEKLPNDISERHVLLLDPVLATGNS 228 (301)
Q Consensus 163 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~-------------~~-~~~~y~~lP~~i~~~~Vil~Dp~laTG~t 228 (301)
++||+.++|.+++..+.+.+. .+. +.+++... .+ ...+...-+..++|++|+|+||+++||+|
T Consensus 56 ~Iv~vp~rG~~~A~~la~~l~-~p~--~~~rk~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLLVDDVitTG~T 132 (186)
T 1l1q_A 56 KVVGIESRGFILGGIVANSLG-VGF--VALRKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGT 132 (186)
T ss_dssp EEEEESGGGHHHHHHHHHHHT-CEE--EEEEETTSSCSSEEEEEEEETTEEEEEEEEEGGGCCTTCCEEEEEEEESSSHH
T ss_pred EEEEcCcccHHHHHHHHHHhC-CCE--EEEEecCCCCCceechhhhhhcCcceEEEEecccCCCcCEEEEEecccccHHH
Confidence 677778999999988877653 222 22221111 01 10112111223589999999999999999
Q ss_pred HHHHHHHHHHcCCCCc--cEEEEEEEeCH--HHHHHHHH
Q 022183 229 ANQAIQLLIEKGVPES--HIIFLNLISAP--EGIHCVCK 263 (301)
Q Consensus 229 ~~~ai~~L~~~g~~~~--~I~~~~~vas~--~gl~~l~~ 263 (301)
+.++++.|++.|+ + .|.+++++.-+ .|-+++..
T Consensus 133 l~aa~~~L~~~Ga--~~~~V~~~~l~~k~~~~g~~~l~~ 169 (186)
T 1l1q_A 133 LLAAIELCETAGV--KPENIYINVLYEIEALKGREKVGQ 169 (186)
T ss_dssp HHHHHHHHHHTTC--CGGGEEEEEEEECGGGCHHHHHTT
T ss_pred HHHHHHHHHHcCC--CcceEEEEEEEEccCccHHHHHhh
Confidence 9999999999998 6 78888888776 47788743
No 49
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=98.39 E-value=1.6e-06 Score=73.92 Aligned_cols=101 Identities=17% Similarity=0.206 Sum_probs=70.4
Q ss_pred eeEEEecccchHHHHHHHHhccCCeeeeEEEEecCCC--CceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHc
Q 022183 162 LCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDN--GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEK 239 (301)
Q Consensus 162 i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~--~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~ 239 (301)
.++|++.++|.++...+.+.+. .+. .+.|.+.+ +... .+..+++|++|+|+||+++||+|+.++++.|++.
T Consensus 60 ~~iv~v~~~G~~~a~~la~~l~-~p~---~~~r~~~~~~g~~~---~i~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ 132 (178)
T 2yzk_A 60 SAVIGVATGGLPWAAMLALRLS-KPL---GYVRPERKGHGTLS---QVEGDPPKGRVVVVDDVATTGTSIAKSIEVLRSN 132 (178)
T ss_dssp SEEEEETTTTHHHHHHHHHHHT-CCE---EEECCCCTTSCCCC---CCBTCCCSSEEEEEEEEESSSHHHHHHHHHHHHT
T ss_pred CEEEEecccchHHHHHHHHHHC-CCE---EEEEccccccCccc---eecccCCCCEEEEEEeccCCcHHHHHHHHHHHHc
Confidence 4677888999999988877653 333 23343321 1110 1224678999999999999999999999999999
Q ss_pred CCCCccEEEEEEEeCH-HHHHHHHHhCCCcEEEEE
Q 022183 240 GVPESHIIFLNLISAP-EGIHCVCKRFPSLKIVTS 273 (301)
Q Consensus 240 g~~~~~I~~~~~vas~-~gl~~l~~~~p~v~i~t~ 273 (301)
|+ +.+.+++++.-+ .|.+++.+. .+.+++.
T Consensus 133 Ga--~~v~~~~l~~r~~~~~~~l~~~--g~~~~sl 163 (178)
T 2yzk_A 133 GY--TVGTALVLVDRGEGAGELLARM--GVRLVSV 163 (178)
T ss_dssp TC--EEEEEEEEEECCSSHHHHHHTT--TCEEEEE
T ss_pred CC--eEEEEEEEEEcCcCHHHHHHHc--CCcEEEE
Confidence 98 677777777643 567777532 3555553
No 50
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=98.39 E-value=1.9e-06 Score=76.99 Aligned_cols=114 Identities=19% Similarity=0.276 Sum_probs=73.5
Q ss_pred eEEEecccchHHHHHHHHhccCCeeeeEEEEecCC-C----------------CceeEeecCCCCCCCcEEEEEcccccc
Q 022183 163 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGD-N----------------GKQLIYEKLPNDISERHVLLLDPVLAT 225 (301)
Q Consensus 163 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~-~----------------~~~~~y~~lP~~i~~~~Vil~Dp~laT 225 (301)
++|++..+|.++...+.+.+. .+. +.+.+... . +......+-....+|++|+|+||+++|
T Consensus 74 ~Ivgv~~gG~~~a~~lA~~L~-~p~--~~~rk~~k~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~~~Gk~VLIVDDvitT 150 (236)
T 1qb7_A 74 HILGFDARGFLFGPMIAVELE-IPF--VLMRKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLAT 150 (236)
T ss_dssp EEEEETTGGGGTHHHHHHHHT-CCE--EEEBCGGGCCSSEEECCCCCCCTTSCCCCCCEEETTSSCTTCEEEEEEEEESS
T ss_pred EEEEECcCcHHHHHHHHHHhC-CCE--EEEEEecCCCCcceeceeccchhhhcCcceEEEecCCCCCcCEEEEEeccccc
Confidence 567778888888887777653 222 22322111 0 100111111223479999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCccEEEEEEEeCH--HHHHHHHH----hCCCcEEEEEeecCCCCC
Q 022183 226 GNSANQAIQLLIEKGVPESHIIFLNLISAP--EGIHCVCK----RFPSLKIVTSEIDVALNE 281 (301)
Q Consensus 226 G~t~~~ai~~L~~~g~~~~~I~~~~~vas~--~gl~~l~~----~~p~v~i~t~~iD~~l~~ 281 (301)
|+|+.++++.|++.|+ +.|.+++++.-. .|.+++.+ .+.++.+++...-..+.+
T Consensus 151 G~Tl~~a~~~L~~~Ga--~~v~v~~l~~~~~~~g~~~l~~~~~~~~~g~~v~sl~~~~~~~~ 210 (236)
T 1qb7_A 151 GGTALSGLQLVEASDA--VVVEMVSILSIPFLKAAEKIHSTANSRYKDIKFISLLSDDALTE 210 (236)
T ss_dssp CHHHHHHHHHHHHTTC--EEEEEEEEEECGGGCHHHHHHHHHHHTTTTCCEEEEEEGGGCCG
T ss_pred HHHHHHHHHHHHHcCC--eEEEEEEEEEcccccHHHHHhhhcccccCCCcEEEEEEcccccH
Confidence 9999999999999998 678888888665 58888875 233455555443333443
No 51
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=98.39 E-value=1.8e-06 Score=74.08 Aligned_cols=95 Identities=17% Similarity=0.169 Sum_probs=66.4
Q ss_pred eeEEEecccchHHHHHHHHhccCCeeeeEEEEecCCC-------------CceeEeecCCCCCCCcEEEEEcccccchHH
Q 022183 162 LCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDN-------------GKQLIYEKLPNDISERHVLLLDPVLATGNS 228 (301)
Q Consensus 162 i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~-------------~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t 228 (301)
-++|++.++|..+...+.+.+. .+.- .+.+.... +...+...-+..++|++|+|+||+++||+|
T Consensus 61 d~Iv~v~~~G~~~a~~la~~l~-~p~~--~~rk~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~T 137 (187)
T 1g2q_A 61 DYIVGLESRGFLFGPTLALALG-VGFV--PVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGS 137 (187)
T ss_dssp CEEEEETTTHHHHHHHHHHHHT-CEEE--EEEETTCSCSSEEEEEEECSSCEEEEEEETTSSCTTCEEEEEEEEESSCHH
T ss_pred CEEEEEccCcHHHHHHHHHHHC-CCEE--EEEEeCCCCcceecHHHHHHhCCCcEEEecccCCCcCEEEEECCCcccHHH
Confidence 4678889999999888877663 2332 23332211 111112222345789999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEEEEEEeCH--HHHHHH
Q 022183 229 ANQAIQLLIEKGVPESHIIFLNLISAP--EGIHCV 261 (301)
Q Consensus 229 ~~~ai~~L~~~g~~~~~I~~~~~vas~--~gl~~l 261 (301)
+.++++.|++.|+ +.|.+++++..+ .|-+++
T Consensus 138 l~~~~~~L~~~Ga--~~v~~~~l~~~~~~~g~~~l 170 (187)
T 1g2q_A 138 AAAAGELVEQLEA--NLLEYNFVMELDFLKGRSKL 170 (187)
T ss_dssp HHHHHHHHHHTTC--EEEEEEEEEECCCSSCCCCC
T ss_pred HHHHHHHHHHcCC--eEEEEEEEEEccCcCchhhc
Confidence 9999999999998 688888888766 355554
No 52
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=98.36 E-value=1.1e-07 Score=84.87 Aligned_cols=106 Identities=9% Similarity=0.038 Sum_probs=75.2
Q ss_pred ceeEEEecccchHHHHHHHHhcc-CCeeeeEEEEec--CCC-CceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHH
Q 022183 161 KLCGVSIVRSGESMENALRACCK-GIKIGKILIHRD--GDN-GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLL 236 (301)
Q Consensus 161 ~i~~V~IlRaG~~m~~~l~~~~p-~a~~G~i~i~Rd--~~~-~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L 236 (301)
+.++|+++++|..++..+.+.+. +..++++.+.+. ..+ +...+...++.+++||+|||+||+++||.|+.++++.|
T Consensus 62 ~~vvVgi~~Gg~~~a~~La~~L~~p~~v~~i~vs~y~~~~s~~v~i~~~~l~~~v~Gk~VLIVDDIidTG~Tl~~a~~~L 141 (230)
T 1dqn_A 62 PVTLVALLTGAYLYASLLTVHLTFPYTLHFVKVSSYKGTRQESVVFDEEDLKQLKEKREVVLIDEYVDSGHTIFSIQEQI 141 (230)
T ss_dssp CEEEEEETTTHHHHHHHHHTTCCSCEEEEEECCEEEECSSCEEEECCHHHHHHHHHCSSEEEEEEEESSSHHHHHHHHHS
T ss_pred CcEEEEECCCCHHHHHHHHHHhCCCceEEEEEEEEeCCCccCceEEEeccCccCCCCCEEEEEeeEcChHHHHHHHHHHh
Confidence 57999999999999999998886 334555554433 222 21111234556789999999999999999999999999
Q ss_pred HHcCCCCccEEEEEEEeCHHHHHHHHHhCCCcEEEEE
Q 022183 237 IEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTS 273 (301)
Q Consensus 237 ~~~g~~~~~I~~~~~vas~~gl~~l~~~~p~v~i~t~ 273 (301)
++ |.+++++..+..+.+-....||.+-|++
T Consensus 142 ~~-------V~vavLl~k~~~~~r~~~i~~D~~~yvg 171 (230)
T 1dqn_A 142 KH-------AKICSCFVKDVDAIKKHSALADTKMFYG 171 (230)
T ss_dssp TT-------CEEEEEEESCHHHHHTSTTTTTCCEEEE
T ss_pred hc-------CEEEEEEECCccccccCCcCCCCceEEE
Confidence 76 7888899888744433334455433444
No 53
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=98.26 E-value=1.4e-06 Score=73.68 Aligned_cols=90 Identities=12% Similarity=0.155 Sum_probs=62.5
Q ss_pred eEEEecccchHHHHHHHHhccCCeeeeEEEEecCC---CCcee-----------EeecCCCC----CCCcEEEEEccccc
Q 022183 163 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGD---NGKQL-----------IYEKLPND----ISERHVLLLDPVLA 224 (301)
Q Consensus 163 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~---~~~~~-----------~y~~lP~~----i~~~~Vil~Dp~la 224 (301)
++|++.++|.++...+.+.+. .+. +.+.+... +.... ....+..+ ++|++|+|+||+++
T Consensus 55 ~Iv~v~~gg~~~a~~la~~l~-~p~--~~~rk~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~gk~VllVDDvit 131 (175)
T 1vch_A 55 ILFTTETSPIPLTHVLAEALG-LPY--VVARRRRRPYMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLVSDVVA 131 (175)
T ss_dssp EEEEESSTHHHHHHHHHHHHT-CCE--EEEBSSCCTTCCSCEEEECCC------CEEEECHHHHHHHTTCEEEEEEEEES
T ss_pred EEEEeCCcChHHHHHHHHHhC-CCE--EEEEecCCCCCCcceeeeeeccccCCceEEEEecccccccCCCEEEEEecccc
Confidence 677888999999988877664 233 22222111 11110 01112222 48999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCccEEEEEEEeCHHH
Q 022183 225 TGNSANQAIQLLIEKGVPESHIIFLNLISAPEG 257 (301)
Q Consensus 225 TG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~g 257 (301)
||+|+.++++.|++.|+ +.|.+++++..+.+
T Consensus 132 TG~Tl~~~~~~L~~~Ga--~~V~~~~l~~~~~~ 162 (175)
T 1vch_A 132 SGETMRAMEKMVLRAGG--HVVARLAVFRQGTP 162 (175)
T ss_dssp SSHHHHHHHHHHHHTTC--EEEEEEEEEECSCC
T ss_pred chHHHHHHHHHHHHcCC--eEEEEEEEEecCCC
Confidence 99999999999999998 78888888876655
No 54
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=98.24 E-value=4.8e-06 Score=72.67 Aligned_cols=101 Identities=12% Similarity=0.239 Sum_probs=68.9
Q ss_pred eEEEecccchHHHHHHHHhccCCeeeeEEEEecCCC--CceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcC
Q 022183 163 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGDN--GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKG 240 (301)
Q Consensus 163 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~--~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g 240 (301)
++|++-.+|.++...+.+.+. .+. +.. |.+.+ +..-.... ...+|++|+|+||+++||+|+.++++.|++.|
T Consensus 65 ~Iv~v~~~g~~~a~~la~~l~-~p~--~~~-rk~~k~~g~~~~~~g--~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~G 138 (205)
T 2wns_A 65 TVCGVPYTALPLATVICSTNQ-IPM--LIR-RKETKDYGTKRLVEG--TINPGETCLIIEDVVTSGSSVLETVEVLQKEG 138 (205)
T ss_dssp EEEECTTTTHHHHHHHHHHHT-CCE--EEE-CCTTTTSSSCCSEES--CCCTTCBEEEEEEEESSSHHHHHHHHHHHHTT
T ss_pred EEEEcCCchHHHHHHHHHHHC-cCE--EEE-ecCcCccCccccccC--CCCCCCEEEEEEEeccccHHHHHHHHHHHHCC
Confidence 677888889999888877653 333 222 33221 11101111 12378999999999999999999999999999
Q ss_pred CCCccEEEEEEEeCH-HHHHHHHHhCCCcEEEEE
Q 022183 241 VPESHIIFLNLISAP-EGIHCVCKRFPSLKIVTS 273 (301)
Q Consensus 241 ~~~~~I~~~~~vas~-~gl~~l~~~~p~v~i~t~ 273 (301)
+ +.+.+++++... .|.+++.+. .+.+++.
T Consensus 139 a--~~v~~~~l~~~~~~~~~~l~~~--g~~v~sl 168 (205)
T 2wns_A 139 L--KVTDAIVLLDREQGGKDKLQAH--GIRLHSV 168 (205)
T ss_dssp C--BCCEEEEEEECCSSHHHHHHTT--TCEEEEE
T ss_pred C--EEEEEEEEEEcCcchHHHHHHc--CCeEEEE
Confidence 8 678888888776 566777432 4555553
No 55
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=98.23 E-value=8.5e-06 Score=73.18 Aligned_cols=94 Identities=12% Similarity=0.145 Sum_probs=66.5
Q ss_pred eEEEecccchHHHHHHHHhccCCeeeeEEEEecCCCC--ceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcC
Q 022183 163 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNG--KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKG 240 (301)
Q Consensus 163 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~~--~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g 240 (301)
+++++..+|.++...+.+.+. .+ .+.+ |.+.+. ...... ...++|++|+|+||+++||+|+.++++.|++.|
T Consensus 103 vIvg~~~gGi~~A~~lA~~L~-~p--~~~v-rk~~k~~G~~~~ie--g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~G 176 (243)
T 3dez_A 103 VIAGTATAGIPHGAIIADKMN-LP--LAYI-RSKPKDHGAGNQIE--GRVTKGQKMVIIEDLISTGGSVLDAVAAAQREG 176 (243)
T ss_dssp EEEEETTTTHHHHHHHHHHTT-CC--EEEE-CSSCC-----CCEE--SCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTT
T ss_pred EEEEecCchHHHHHHHHHHcC-CC--EEEE-EEeeccCCceeEEE--eccCCCCEEEEEEeeccccHHHHHHHHHHHHCC
Confidence 677888899999888777653 22 2333 433221 111111 124679999999999999999999999999999
Q ss_pred CCCccEEEEEEEeC--HHHHHHHHHh
Q 022183 241 VPESHIIFLNLISA--PEGIHCVCKR 264 (301)
Q Consensus 241 ~~~~~I~~~~~vas--~~gl~~l~~~ 264 (301)
+ +.+.+++++.- ..|.+++.+.
T Consensus 177 a--~vv~v~~l~d~~~~~a~e~l~~~ 200 (243)
T 3dez_A 177 A--DVLGVVAIFTYELPKATANFEKA 200 (243)
T ss_dssp C--EEEEEEEEEECCCHHHHHHHHHH
T ss_pred C--EEEEEEEEEECCCchHHHHHHhc
Confidence 8 56777777764 6788888654
No 56
>2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A*
Probab=98.23 E-value=4e-07 Score=86.16 Aligned_cols=58 Identities=14% Similarity=0.033 Sum_probs=54.9
Q ss_pred eEEEEeCCchhHHHHHhhhccccCCC--CHHHHHHHHHhhccchhHhhcccccccccEeecC
Q 022183 3 MKIFVDTDADVRLARRIRRDTVERGR--DVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPR 62 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rri~RD~~erg~--~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~ 62 (301)
++||||+|.++++.|.+.||+ ++|+ +.++++++|....+|.. +||+|++.+||+|+.-
T Consensus 291 ~~i~Vdad~ev~~~Rli~R~~-~~Gl~~s~eea~~r~~~~d~pN~-~~I~~~~~~ad~i~~~ 350 (359)
T 2ga8_A 291 LVYKIDIDYEATEERVAKRHL-QSGLVTTIAEGREKFRSNDLLNG-RDIDNHLIKVDNIVHI 350 (359)
T ss_dssp EEEEEECCHHHHHHHHHHHHH-HTTSCSSHHHHHHHHHHCTTTSS-HHHHHTBCCCTTEEEE
T ss_pred EEEEEECCHHHHHHHHHHhhh-ccCCCCCHHHHHHHHHhcCchhh-HhHhhcCCCCCEEEEe
Confidence 899999999999999999998 5899 99999999999999977 8999999999999854
No 57
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=98.22 E-value=5e-06 Score=73.64 Aligned_cols=88 Identities=11% Similarity=0.149 Sum_probs=60.1
Q ss_pred eEEEecccchHHHHHHHHhc--------cCCeeeeEEEEecCCCCceeEeecCCCCCCCcEEEEEcccccchHHHHHHHH
Q 022183 163 CGVSIVRSGESMENALRACC--------KGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQ 234 (301)
Q Consensus 163 ~~V~IlRaG~~m~~~l~~~~--------p~a~~G~i~i~Rd~~~~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~ 234 (301)
+++.+..+|.++...+.+.+ .+.+..++--.|.. .+...... ...++|++|+|+||+++||+|+.++++
T Consensus 70 ~Vvg~~~~G~~~a~~lA~~L~~~~~~~~~~~p~~~~rk~~k~-~g~~~~~~--~~~i~Gk~VlIVDDvitTG~Tl~~a~~ 146 (226)
T 2ps1_A 70 VIFGPAYKGIPLAAIVCVKLAEIGGSKFQNIQYAFNRKEAKD-HGEGGIIV--GSALENKRILIIDDVMTAGTAINEAFE 146 (226)
T ss_dssp EEEECTTTHHHHHHHHHHHHHHHSTTTTTTCEEEEEEEEEES-STTCEEEE--ESCCTTCEEEEEEEEESSSHHHHHHHH
T ss_pred EEEEeccCCHHHHHHHHHHHHhhhccccCCCCEEEEechhhh-cCCCceEe--cCCCCcCEEEEEEecccChHHHHHHHH
Confidence 44667777888887776666 24444332222211 11111122 235789999999999999999999999
Q ss_pred HHHHcCCCCccEEEEEEEeCH
Q 022183 235 LLIEKGVPESHIIFLNLISAP 255 (301)
Q Consensus 235 ~L~~~g~~~~~I~~~~~vas~ 255 (301)
.|++.|+ +.+.+++++.-+
T Consensus 147 ~L~~~Ga--~~v~v~~l~dr~ 165 (226)
T 2ps1_A 147 IISNAKG--QVVGSIIALDRQ 165 (226)
T ss_dssp HHHHTTC--EEEEEEEEEECC
T ss_pred HHHHcCC--eEEEEEEEEEcc
Confidence 9999998 677778877554
No 58
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=98.21 E-value=3.6e-07 Score=84.08 Aligned_cols=64 Identities=13% Similarity=0.222 Sum_probs=52.0
Q ss_pred CeEEEEeCCchhHHHH-Hhhh--c-cccC--CCCHHHHHHHHHhhccchhHhhcccccc------cccEeecCCCCC
Q 022183 2 NMKIFVDTDADVRLAR-RIRR--D-TVER--GRDVDSVLEQYAKFVKPAFDDFVLPSKK------YADVIIPRGGDN 66 (301)
Q Consensus 2 d~~ifvd~~~d~rl~R-ri~R--D-~~er--g~~~~~v~~~~~~~~~p~~~~~i~P~~~------~ADiii~~~~~~ 66 (301)
|++||||+|.+.++.| |++| | ..+| |++.+++ .+|.+.++|+|+.|++|.++ .||+|+.-+.+.
T Consensus 204 d~~I~vd~~~~~~i~rWRi~re~~l~~~r~~g~s~e~v-~~~~~~~~p~y~~~~~~~~~~~~~~~~adlvl~~~~~~ 279 (290)
T 1odf_A 204 SLGIVFTTDNINNVYGWRLQQEHELISKVGKGMTDEQV-HAFVDRYMPSYKLYLNDFVRSESLGSIATLTLGIDSNR 279 (290)
T ss_dssp EEEEEEEESCTTHHHHHHHHHHHHHHHHHSCSCCHHHH-HHHHHTTHHHHHHHHHHHHHHTCSSSSEEEEEEECTTS
T ss_pred cceEEEECCCHHHHHHHHHHHHHHHHHhccCCCCHHHH-HHHHHHhcchHHHHhHHHHHhccCCCCCCEEEEECCCC
Confidence 4459999999999998 9999 7 4557 9999997 77888899999999888654 589998765443
No 59
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=98.19 E-value=1.9e-06 Score=71.73 Aligned_cols=86 Identities=15% Similarity=0.195 Sum_probs=60.0
Q ss_pred eEEEecccchHHHHHHHHhccCCeeeeEEEEecC--CCCceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcC
Q 022183 163 CGVSIVRSGESMENALRACCKGIKIGKILIHRDG--DNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKG 240 (301)
Q Consensus 163 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~--~~~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g 240 (301)
++|++.++|..+...+.+.+.--++.++...+.. .++. ....+-+ +++|++|+|+||+++||+|+.++++.|++
T Consensus 31 ~vvgi~~Gg~~~a~~la~~l~~~~~~~i~~~~y~~~~~~~-~~~~~~~-~~~gk~VliVDDii~TG~Tl~~a~~~l~~-- 106 (152)
T 1nul_A 31 GIIAVSRGGLVPGALLARELGIRHVDTVCISSYDHDNQRE-LKVLKRA-EGDGEGFIVIDDLVDTGGTAVAIREMYPK-- 106 (152)
T ss_dssp EEEEEETTTHHHHHHHHHHHTCCCEEEEEEEC---------CEEEECC-SSCCTTEEEEEEEECTTSSHHHHHHHCTT--
T ss_pred EEEEEcCCCHHHHHHHHHHcCCCcceEEEEEEecCcccce-EEEecCC-CCCcCEEEEEEeecCchHHHHHHHHHHhh--
Confidence 6899999999999999888752235555443321 1221 1112222 47899999999999999999999999864
Q ss_pred CCCccEEEEEEEeCHHH
Q 022183 241 VPESHIIFLNLISAPEG 257 (301)
Q Consensus 241 ~~~~~I~~~~~vas~~g 257 (301)
+.+++++--+.+
T Consensus 107 -----v~~a~L~~k~~~ 118 (152)
T 1nul_A 107 -----AHFVTIFAKPAG 118 (152)
T ss_dssp -----SEEEEEEECGGG
T ss_pred -----CCEEEEEECCCC
Confidence 677888876643
No 60
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=98.17 E-value=8.5e-06 Score=72.78 Aligned_cols=101 Identities=14% Similarity=0.185 Sum_probs=64.9
Q ss_pred eEEEecccchHHHHHHHHhccCCeeeeEEEEecCCC--CceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcC
Q 022183 163 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGDN--GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKG 240 (301)
Q Consensus 163 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~--~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g 240 (301)
+++++..+|.++...+.+.+. .+. +.+ |.+.+ +...... ...++|++|+|+||+++||+|+.++++.|++.|
T Consensus 91 ~Ivg~~~gGi~~a~~lA~~L~-~p~--~~v-rk~~k~~G~~~~i~--g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~G 164 (234)
T 3m3h_A 91 VIAGTATAGIAHAAWVSDRMD-LPM--CYV-RSKAKGHGKGNQIE--GKAEKGQKVVVVEDLISTGGSAITCVEALREAG 164 (234)
T ss_dssp EEEEC---CHHHHHHHHHHHT-CCE--EEE-C---------CCEE--SCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTT
T ss_pred EEEEeccchHHHHHHHHHHcC-CCE--EEE-EEeeccCCcceEEe--cccCCCCEEEEEecccchhHHHHHHHHHHHHCC
Confidence 667777899999888776653 232 333 33221 1110011 123579999999999999999999999999999
Q ss_pred CCCccEEEEEEEeC--HHHHHHHHHhCCCcEEEEE
Q 022183 241 VPESHIIFLNLISA--PEGIHCVCKRFPSLKIVTS 273 (301)
Q Consensus 241 ~~~~~I~~~~~vas--~~gl~~l~~~~p~v~i~t~ 273 (301)
+ +.+.+++++.- +.|.+++.+. .+.+++.
T Consensus 165 a--~vv~v~~l~~~~~~~~~e~l~~~--gi~v~sL 195 (234)
T 3m3h_A 165 C--EVLGIVSIFTYELEAGKEKLEAA--NVASYSL 195 (234)
T ss_dssp C--EEEEEEEEEECCCHHHHHHHHHT--TCCEEES
T ss_pred C--EEEEEEEEEECcCchHHHHHHhc--CCCEEEE
Confidence 8 56777777764 6777888653 4555543
No 61
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=98.12 E-value=5.4e-06 Score=73.99 Aligned_cols=86 Identities=15% Similarity=0.173 Sum_probs=59.8
Q ss_pred eEEEecccchHHHHHHHHhcc-----CCeeeeEEEEecCCC--CceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHH
Q 022183 163 CGVSIVRSGESMENALRACCK-----GIKIGKILIHRDGDN--GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQL 235 (301)
Q Consensus 163 ~~V~IlRaG~~m~~~l~~~~p-----~a~~G~i~i~Rd~~~--~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~ 235 (301)
+++++..+|.++...+...+- +.+. +.+ |.+.+ +..-... ...++|++|+|+||+++||+|+.++++.
T Consensus 84 ~Ivg~~~gGi~~A~~lA~~L~~~~g~~~p~--~~~-RK~~k~~g~~~~i~--g~~~~Gk~VLIVDDVitTG~Tl~~a~~~ 158 (232)
T 3mjd_A 84 ILFGPAYKGIPLVAAISTVLALKYNIDMPY--AFD-RKEAKDHGEGGVFV--GADMTNKKVLLIDDVMTAGTAFYESYNK 158 (232)
T ss_dssp EEEECTTTHHHHHHHHHHHHHHHHCCCCBE--EEE-CCC-------CCEE--ESCCTTCEEEEECSCCSSSHHHHHHHHH
T ss_pred EEEEecCCcHHHHHHHHHHHhhhcCCCCcE--EEE-EeecccCCCCceEe--ccCCCCCEEEEEEeeccccHHHHHHHHH
Confidence 678888999999888877752 3443 333 33321 1110011 1256899999999999999999999999
Q ss_pred HHHcCCCCccEEEEEEEeCH
Q 022183 236 LIEKGVPESHIIFLNLISAP 255 (301)
Q Consensus 236 L~~~g~~~~~I~~~~~vas~ 255 (301)
|++.|+ +-+-+++++--+
T Consensus 159 L~~~Ga--~vv~v~vlvdr~ 176 (232)
T 3mjd_A 159 LKIINA--KIAGVVLSIDRQ 176 (232)
T ss_dssp HHTTTC--EEEEEEEEEECC
T ss_pred HHHCCC--EEEEEEEEEECC
Confidence 999998 567777777644
No 62
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=98.11 E-value=1.5e-05 Score=71.38 Aligned_cols=102 Identities=14% Similarity=0.218 Sum_probs=68.2
Q ss_pred eEEEecccchHHHHHHHHhcc---CCeeeeEEEEecCCCC----ceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHH
Q 022183 163 CGVSIVRSGESMENALRACCK---GIKIGKILIHRDGDNG----KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQL 235 (301)
Q Consensus 163 ~~V~IlRaG~~m~~~l~~~~p---~a~~G~i~i~Rd~~~~----~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~ 235 (301)
+++++-.+|.++...+...+- ...+..+.+ |.+.+. ..+. ...++| +|+|+||+++||+|+.++++.
T Consensus 91 ~Vvg~~~gGi~~A~~lA~~L~~~~g~~vp~~~~-RK~~k~~g~~~~i~----G~~~~G-~VliVDDvitTG~T~~~a~~~ 164 (238)
T 3n2l_A 91 VLFGPAYKGIPIATTTAVALADHHDVDTPYCFN-RKEAKNHGEGGNLV----GSKLEG-RVMLVDDVITAGTAIRESMEL 164 (238)
T ss_dssp EEEECTTTHHHHHHHHHHHHHHHSCCCCBEEEE-CCC--------CEE----ESCCCS-EEEEECSCCSSSHHHHHHHHH
T ss_pred EEEecccChHHHHHHHHHHHhHhhCCCccEEEE-eeccCCCCCCceEe----ccccCC-cEEEEeeeecccHHHHHHHHH
Confidence 677888899999888776651 222333333 433221 1111 135679 999999999999999999999
Q ss_pred HHHcCCCCccEEEEEEEeCH-------HHHHHHHHhCCCcEEEEE
Q 022183 236 LIEKGVPESHIIFLNLISAP-------EGIHCVCKRFPSLKIVTS 273 (301)
Q Consensus 236 L~~~g~~~~~I~~~~~vas~-------~gl~~l~~~~p~v~i~t~ 273 (301)
|++.|+ +-+-+++++.-+ .|++++.+.+ .+.+++.
T Consensus 165 l~~~Ga--~vv~v~vlvdr~egG~~~l~a~~~~~~~~-Gv~v~SL 206 (238)
T 3n2l_A 165 IQANKA--DLAGVLVAIDRQEKGKGELSAIQEVERDF-GCAVISI 206 (238)
T ss_dssp HHHTTC--EEEEEEEEEECCCBCSSSSBHHHHHHHHH-CCEEEEE
T ss_pred HHHcCC--EEEEEEEEEEcccCccchhhHHHHHHHHc-CCCEEEE
Confidence 999998 456666677633 3677775544 5666654
No 63
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=97.95 E-value=1.2e-05 Score=70.58 Aligned_cols=84 Identities=14% Similarity=0.254 Sum_probs=59.9
Q ss_pred eEEEecccchHHHHHHHHhcc-----CCeeeeEEEEecCCC--C--ceeEeecCCCCCCCcEEEEEcccccchHHHHHHH
Q 022183 163 CGVSIVRSGESMENALRACCK-----GIKIGKILIHRDGDN--G--KQLIYEKLPNDISERHVLLLDPVLATGNSANQAI 233 (301)
Q Consensus 163 ~~V~IlRaG~~m~~~l~~~~p-----~a~~G~i~i~Rd~~~--~--~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai 233 (301)
++|++..+|.++...+.+.+. +.+. +.+ |.+.+ + ..+. . ..++| +|+|+||+++||+|+.+++
T Consensus 66 ~Ivgv~~~G~~~a~~lA~~L~~~~~~~~~~--~~~-rk~~~~~~~~~~~~--g--~~~~g-~VliVDDvitTG~Tl~~a~ 137 (213)
T 1lh0_A 66 LLFGPAYKGIPIATTTAVALAEHHDKDLPY--CFN-RKEAKDHGEGGSLV--G--SALQG-RVMLVDDVITAGTAIRESM 137 (213)
T ss_dssp EEECCTTTHHHHHHHHHHHHHHHHCCCCBE--EEE-CSSCCSSTTCSSEE--E--SCCCS-EEEEECSCCSSSCHHHHHH
T ss_pred EEEEcCCCcHHHHHHHHHHHHHhhCCCCCE--EEE-EeccCccCCCCcee--C--CCCCC-CEEEEEecccchHHHHHHH
Confidence 677888889998887777662 3333 333 33322 1 1111 1 24679 9999999999999999999
Q ss_pred HHHHHcCCCCccEEEEEEEeCHH
Q 022183 234 QLLIEKGVPESHIIFLNLISAPE 256 (301)
Q Consensus 234 ~~L~~~g~~~~~I~~~~~vas~~ 256 (301)
+.|++.|+ +.+.+++++--++
T Consensus 138 ~~l~~~Ga--~~v~v~~l~dr~~ 158 (213)
T 1lh0_A 138 EIIQAHGA--TLAGVLISLDRQE 158 (213)
T ss_dssp HHHHHTTC--EEEEEEEEEECCB
T ss_pred HHHHHCCC--eEEEEEEEEEccc
Confidence 99999998 6777888875553
No 64
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1
Probab=97.88 E-value=1.8e-05 Score=69.67 Aligned_cols=63 Identities=24% Similarity=0.357 Sum_probs=52.9
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCC--CHHHHHHHHHhhccchhHhhccccccccc-EeecCCC
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGR--DVDSVLEQYAKFVKPAFDDFVLPSKKYAD-VIIPRGG 64 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~--~~~~v~~~~~~~~~p~~~~~i~P~~~~AD-iii~~~~ 64 (301)
+|++||+++|.++++.|++.|+ .+||+ +.+++.+++.+...+.++.+++|....+| ++|++++
T Consensus 153 ~d~vi~L~a~~e~~~~R~~~~~-~~R~~~~~~e~~~~~i~~R~~~~~~~~~~p~~~~~d~~vId~~~ 218 (236)
T 1q3t_A 153 AELKIFLVASVDERAERRYKEN-IAKGIETDLETLKKEIAARDYKDSHRETSPLKQAEDAVYLDTTG 218 (236)
T ss_dssp CSEEEEEECCHHHHHHHHHHHH-HHTTCCCCHHHHHHHHHHHHHHHTTCSSSCCSCCTTCEEEECSS
T ss_pred CCEEEEEECCHHHHHHHHHHHH-HhcCCCCCHHHHHHHHHHHhhhhhhcccccccccCCEEEEcCCC
Confidence 3789999999999999987775 35765 88999999987778888888999988887 9998754
No 65
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=97.86 E-value=2.6e-05 Score=71.72 Aligned_cols=89 Identities=18% Similarity=0.258 Sum_probs=59.8
Q ss_pred eEEEecccchHHHHHHHHhccCCeeeeEEEEecCCC--C--------------c-eeEeecCCCCCCCcEEEEEcccccc
Q 022183 163 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGDN--G--------------K-QLIYEKLPNDISERHVLLLDPVLAT 225 (301)
Q Consensus 163 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~--~--------------~-~~~y~~lP~~i~~~~Vil~Dp~laT 225 (301)
++|++-.+|.++...+.+.+. .++ +.+.+.... + . .+...+ ....+|++|+|+||+++|
T Consensus 133 ~Iv~V~~rG~~~A~~lA~~L~-vp~--v~~rk~~~~t~~~~~~~~~~~g~~~~~~~~~l~~-~~l~~Gk~VLIVDDViTT 208 (291)
T 1o57_A 133 VVMTVATKGIPLAYAAASYLN-VPV--VIVRKDNKVTEGSTVSINYVSGSSNRIQTMSLAK-RSMKTGSNVLIIDDFMKA 208 (291)
T ss_dssp EEEEETTTTHHHHHHHHHHHT-CCE--EEEBCC-----CCEEEEEEECSSCCSEEEEEEEG-GGSCTTCEEEEEEEEESS
T ss_pred EEEEECCCCHHHHHHHHHHhC-CCE--EEEEEeccCCCCceeeeeeecccccceeeEEEec-ccCCCcCEEEEEEEEcCc
Confidence 566677888888877776652 222 222222110 0 0 111111 223579999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCccEEEEEEEeCHHH
Q 022183 226 GNSANQAIQLLIEKGVPESHIIFLNLISAPEG 257 (301)
Q Consensus 226 G~t~~~ai~~L~~~g~~~~~I~~~~~vas~~g 257 (301)
|+|+.++++.|++.|+ +.+.+++++..+.+
T Consensus 209 G~Tl~~a~~~L~~aGA--~vV~v~vlvdr~~~ 238 (291)
T 1o57_A 209 GGTINGMINLLDEFNA--NVAGIGVLVEAEGV 238 (291)
T ss_dssp SHHHHHHHHHTGGGTC--EEEEEEEEEEESSC
T ss_pred HHHHHHHHHHHHHCCC--EEEEEEEEEEcCcc
Confidence 9999999999999998 67778888877666
No 66
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=97.75 E-value=5e-05 Score=74.90 Aligned_cols=86 Identities=14% Similarity=0.168 Sum_probs=59.9
Q ss_pred eeEEEecccchHHHHHHHHhccCCee--eeEEEEecC-CCC--c-------e--eEeecCCCCCCCcEEEEEcccccchH
Q 022183 162 LCGVSIVRSGESMENALRACCKGIKI--GKILIHRDG-DNG--K-------Q--LIYEKLPNDISERHVLLLDPVLATGN 227 (301)
Q Consensus 162 i~~V~IlRaG~~m~~~l~~~~p~a~~--G~i~i~Rd~-~~~--~-------~--~~y~~lP~~i~~~~Vil~Dp~laTG~ 227 (301)
-++|++..+|.+++.++.+.+. .+. +.+. .|.. .+. + . ..+..++.+++||+|+|+||+++||+
T Consensus 296 dvVv~vP~~g~~~A~~la~~lg-~p~~~~~~k-~r~~~~t~i~~~~~~R~~~v~~~~~~~~~~v~Gk~VllVDDii~TG~ 373 (504)
T 1ecf_A 296 DVVIPIPETSCDIALEIARILG-KPYRQGFVK-NRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGT 373 (504)
T ss_dssp CEEEECTTTTHHHHHHHHHHHT-CCBCCCEEE-CSCCCCCCCCSSSCCCCCCSTTTEEECGGGTTTCCEEEEESCCSSSH
T ss_pred eEEEEECCcHHHHHHHHHHHhC-CCceeeEEE-ecccCCceeCccHHHHHHHHHhhhccccccCCCCeEEEEeccccccH
Confidence 4788888899999988887763 222 2222 1211 110 0 0 11222356789999999999999999
Q ss_pred HHHHHHHHHHHcCCCCccEEEEEE
Q 022183 228 SANQAIQLLIEKGVPESHIIFLNL 251 (301)
Q Consensus 228 t~~~ai~~L~~~g~~~~~I~~~~~ 251 (301)
|+.++++.|++.|+ +.|.++++
T Consensus 374 Tl~~~~~~L~~~Ga--~~V~~~~l 395 (504)
T 1ecf_A 374 TSEQIIEMAREAGA--KKVYLASA 395 (504)
T ss_dssp HHHHHHHHHHHTTC--SSEEEEES
T ss_pred HHHHHHHHHHhcCC--cEEEEEEE
Confidence 99999999999998 67877764
No 67
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=97.64 E-value=3.8e-05 Score=74.85 Aligned_cols=84 Identities=12% Similarity=0.173 Sum_probs=56.9
Q ss_pred eEEEecccchHHHHHHHHhccCCeeeeEEEEecCCCC--------------ceeEeecCCCCCCCcEEEEEcccccchHH
Q 022183 163 CGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNG--------------KQLIYEKLPNDISERHVLLLDPVLATGNS 228 (301)
Q Consensus 163 ~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~~--------------~~~~y~~lP~~i~~~~Vil~Dp~laTG~t 228 (301)
++||+..+|..++.++.+.+. .+.... +.|...+. ....+.....+++||+|+|+||+++||+|
T Consensus 276 vVV~VP~~g~~~A~~la~~lg-~p~~~~-l~k~r~~~~~~~~~~~~~R~~~~~~~~~~~~~~v~gk~VlLVDDvitTG~T 353 (459)
T 1ao0_A 276 VVTGVPDSSISAAIGYAEATG-IPYELG-LIKNRYVGRTFIQPSQALREQGVRMKLSAVRGVVEGKRVVMVDDSIVRGTT 353 (459)
T ss_dssp EEECCTTTTHHHHHHHHHHHC-CCBCCC-EEECTTCCTTSCCCCHHHHHHTCCSSEEECHHHHTTCEEEEEESCCSSSHH
T ss_pred EEEEECCcHHHHHHHHHHHhC-CCCcee-EEEecCCCccccCCCHHHHHhhhhhhcccccccCCCCeEEEEeeeecCHHH
Confidence 577888888888888776653 233222 22322110 01111112346789999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEEEE
Q 022183 229 ANQAIQLLIEKGVPESHIIFLN 250 (301)
Q Consensus 229 ~~~ai~~L~~~g~~~~~I~~~~ 250 (301)
+.++++.|++.|+ ++|.+++
T Consensus 354 l~~a~~~L~~~Ga--~~V~~~~ 373 (459)
T 1ao0_A 354 SRRIVTMLREAGA--TEVHVKI 373 (459)
T ss_dssp HHHHHHHHHHTTC--SEEEEEE
T ss_pred HHHHHHHHHHcCC--CEEEEEE
Confidence 9999999999998 6777666
No 68
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A*
Probab=97.57 E-value=7.9e-05 Score=64.35 Aligned_cols=62 Identities=18% Similarity=0.267 Sum_probs=40.0
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCC--CHHHHHHHHHhhccchhHhhccccccc-ccEeecCC
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGR--DVDSVLEQYAKFVKPAFDDFVLPSKKY-ADVIIPRG 63 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~--~~~~v~~~~~~~~~p~~~~~i~P~~~~-ADiii~~~ 63 (301)
.|++||++++.++++.|+..+ ..+||+ +.+++.+++.+..++.|.++.+|.+.+ ++++|+++
T Consensus 141 ~d~~i~l~~~~e~~~~R~~~~-l~~rg~~~~~~~~~~~i~~R~~~~~~~~~~pl~~~~~~~~Id~~ 205 (227)
T 1cke_A 141 APVKIFLDASSEERAHRRMLQ-LQVKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDST 205 (227)
T ss_dssp CSEEEEEECCHHHHHHHHHHH-HHHHTCCCCHHHHHHHHC-------------CCCCTTCEEEETT
T ss_pred CCEEEEEeCCHHHHHHHHHHH-HHhCCccCCHHHHHHHHHHHHHhhhhhcccCccCCCCEEEEeCC
Confidence 478999999999999997654 446787 889999998887788898898998876 45889875
No 69
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=97.54 E-value=0.0001 Score=65.75 Aligned_cols=80 Identities=18% Similarity=0.199 Sum_probs=51.2
Q ss_pred CeEEEEeCCchhHHHHHhhhcccc-CCCCHHHHHHHHHhhccchhHhhccccccccc-EeecCCCCC-chhHHHHHHHHh
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVE-RGRDVDSVLEQYAKFVKPAFDDFVLPSKKYAD-VIIPRGGDN-HVAIDLIVQHIH 78 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~e-rg~~~~~v~~~~~~~~~p~~~~~i~P~~~~AD-iii~~~~~~-~~~~~~i~~~i~ 78 (301)
|++||++++.++|..||..+.... .+.+.+++.+++.+.-+....+++.|.+++|| ++|++++.+ ...++.|.+.++
T Consensus 164 ~~~ifl~A~~e~r~~R~~~~l~~~~~~~~~~~~~~~i~~rd~~~~~r~~~pl~~~~d~~~Idts~~~~eev~~~I~~~i~ 243 (252)
T 4e22_A 164 PVKIFLDASSQERAHRRMLQLQERGFNVNFERLLAEIQERDNRDRNRSVAPLVPAADALVLDSTSMSIEQVIEQALAYAQ 243 (252)
T ss_dssp SEEEEEECCHHHHHHHHHHHHHHHTCCCCHHHHHHHHC------------CCCCCTTEEEEECSSSCHHHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhhhccccchhccCCeEEEECcCCCHHHHHHHHHHHHH
Confidence 789999999999999998743322 25688999999888788888899999999999 899886543 334456666665
Q ss_pred hhc
Q 022183 79 TKL 81 (301)
Q Consensus 79 ~~l 81 (301)
..+
T Consensus 244 ~~~ 246 (252)
T 4e22_A 244 RIL 246 (252)
T ss_dssp HHC
T ss_pred HHh
Confidence 543
No 70
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A*
Probab=97.45 E-value=0.00019 Score=63.84 Aligned_cols=77 Identities=18% Similarity=0.261 Sum_probs=61.0
Q ss_pred CeEEEEeCCchhHHHHHhhhcccc-CCCCHHHHHHHHHhhccchhHhhccccccccc-EeecCCCCCchhHHHHHHHHhh
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVE-RGRDVDSVLEQYAKFVKPAFDDFVLPSKKYAD-VIIPRGGDNHVAIDLIVQHIHT 79 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~e-rg~~~~~v~~~~~~~~~p~~~~~i~P~~~~AD-iii~~~~~~~~~~~~i~~~i~~ 79 (301)
++|||+++|.++|..||..+-... .+.+.+++..+..+.-+....+|+.|.+.++| ++|+.+.-. ++.+++.|.+
T Consensus 147 ~lkifl~A~~e~Ra~Rr~~~l~~~~~~~~~~~~~~~i~~rD~~d~~r~~~pl~~~~dal~IDTs~l~---iee~v~~I~~ 223 (233)
T 3r20_A 147 DVKIFLTASAEERARRRNAQNVANGLPDDYATVLADVQRRDHLDSTRPVSPLRAADDALVVDTSDMD---QAQVIAHLLD 223 (233)
T ss_dssp SEEEEEECCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHSCSSCCSCCTTSEEEECTTSC---HHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhhhccccccccccCcEEEECCCCC---HHHHHHHHHH
Confidence 699999999999999999765433 46799999999999888889999999999998 999875433 4444444444
Q ss_pred hc
Q 022183 80 KL 81 (301)
Q Consensus 80 ~l 81 (301)
.+
T Consensus 224 ~i 225 (233)
T 3r20_A 224 LV 225 (233)
T ss_dssp HC
T ss_pred HH
Confidence 43
No 71
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=97.45 E-value=0.00017 Score=61.60 Aligned_cols=71 Identities=17% Similarity=0.224 Sum_probs=49.1
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhh
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (301)
+|..||+++|.++++.|...|| |++.+++.+.+.. ..|.. |..+.||++|+++++..++++.+.+.|.+.
T Consensus 124 ~d~vi~l~~~~e~~~~Rl~~R~----~~~~e~~~~r~~~-q~~~~-----~~~~~ad~vIdn~~~~~~~~~~~~~~i~~~ 193 (206)
T 1jjv_A 124 CDRILVVDVSPQTQLARSAQRD----NNNFEQIQRIMNS-QVSQQ-----ERLKWADDVINNDAELAQNLPHLQQKVLEL 193 (206)
T ss_dssp CSEEEEEECCHHHHHHHHC---------CHHHHHHHHHH-SCCHH-----HHHHHCSEEEECCSCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHcC----CCCHHHHHHHHHh-cCChH-----HHHHhCCEEEECCCCccccHHHHHHHHHHH
Confidence 4889999999999999999986 7888888888776 33433 334589999998765554555666666554
Q ss_pred c
Q 022183 81 L 81 (301)
Q Consensus 81 l 81 (301)
+
T Consensus 194 ~ 194 (206)
T 1jjv_A 194 H 194 (206)
T ss_dssp H
T ss_pred H
Confidence 4
No 72
>2h92_A Cytidylate kinase; rossmann fold, transferase; HET: C5P PG4; 2.30A {Staphylococcus aureus}
Probab=97.41 E-value=0.00025 Score=60.97 Aligned_cols=63 Identities=17% Similarity=0.312 Sum_probs=50.7
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCC--CHHHHHHHHHhhccchhHhhccccccccc-EeecCCC
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGR--DVDSVLEQYAKFVKPAFDDFVLPSKKYAD-VIIPRGG 64 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~--~~~~v~~~~~~~~~p~~~~~i~P~~~~AD-iii~~~~ 64 (301)
.|+.||+++|.++++.|++.|+ ..||+ +.+++.+.+.+...++..+.+.|....|| ++|++++
T Consensus 136 ~~~vi~l~a~~e~~~~R~~~~~-~~r~~~~~~e~~~~~~~~r~~~d~~r~~~~~~~~~d~~~Id~~~ 201 (219)
T 2h92_A 136 ADLKVYMIASVEERAERRYKDN-QLRGIESNFEDLKRDIEARDQYDMNREISPLRKADDAVTLDTTG 201 (219)
T ss_dssp CSEEEEEECCHHHHHHHHHHHH-HHTTCCCCHHHHHHHHHHHHHHHHHCSSSCSCCCTTCEEEECTT
T ss_pred CCEEEEEECCHHHHHHHHHHHH-HhcCcccCHHHHHHHHHHHHHhhhhhhccccccCCCeEEEECCC
Confidence 3789999999999999988763 35777 88899888876556778888888877788 9998754
No 73
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=97.34 E-value=0.00053 Score=66.74 Aligned_cols=101 Identities=15% Similarity=0.185 Sum_probs=66.2
Q ss_pred eeEEEecccchHHHHHHHHhccCCeeeeEEEEecCCC--CceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHc
Q 022183 162 LCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDN--GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEK 239 (301)
Q Consensus 162 i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~--~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~ 239 (301)
-+++++..+|.++...+.+.+. .+ .+.+ |.+.+ +..-.... ...+|++|+|+||+++||+|+..+++.|++.
T Consensus 318 D~Ivg~~~gGi~~A~~lA~~L~-~p--~~~~-rk~~k~~g~~~~i~g--~~~~G~~VliVDDvitTG~T~~~~~~~l~~~ 391 (453)
T 3qw4_B 318 DRIAGLPYAALPIASAISNEMN-VP--LIYP-RREAKIYGTKAAIEG--EYKKGDRVVIIDDLVSTGETKVEAIEKLRSA 391 (453)
T ss_dssp SEEEECTTTTHHHHHHHHHHHC-CC--EEEE-SSCC-------CEES--CCCTTCEEEEEEEEECC-CCHHHHHHHHHTT
T ss_pred CEEEeccCCcHHHHHHHHHHhC-CC--EEEE-EeeccccCcCceEec--ccCCCCEEEEEeeeechhHHHHHHHHHHHHc
Confidence 3788999999999988877653 22 2333 33321 11111111 1247999999999999999999999999999
Q ss_pred CCCCccEEEEEEEeCHH-HHHHHHHhCCCcEEEE
Q 022183 240 GVPESHIIFLNLISAPE-GIHCVCKRFPSLKIVT 272 (301)
Q Consensus 240 g~~~~~I~~~~~vas~~-gl~~l~~~~p~v~i~t 272 (301)
|+ +.+.+++++.-.+ |-+++.+ + .+.+++
T Consensus 392 g~--~vv~v~~lvdr~~~g~~~l~~-~-g~~v~s 421 (453)
T 3qw4_B 392 GL--EVVSIVVLVDRDMGAKAFLNK-L-GYDFEA 421 (453)
T ss_dssp TC--EEEEEEEEEECSSSHHHHHHH-T-TCCEEE
T ss_pred CC--EEEEEEEEEECCcchHHHHHh-c-CCCEEE
Confidence 98 5677777776544 5556644 2 344444
No 74
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=97.31 E-value=0.00037 Score=63.24 Aligned_cols=54 Identities=13% Similarity=0.091 Sum_probs=43.9
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCC
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGG 64 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~ 64 (301)
+|+.|||++|.++++.|...|| |++.+++.+.|.+. .+ ...|+ ..||++|++..
T Consensus 200 ~d~vI~l~a~~ev~~~Rl~~R~----g~s~e~~~~ri~~q-~~-~~~~~----~~AD~vIdn~~ 253 (281)
T 2f6r_A 200 VHEVWTVVIPETEAVRRIVERD----GLSEAAAQSRLQSQ-MS-GQQLV----EQSNVVLSTLW 253 (281)
T ss_dssp CSEEEEEECCHHHHHHHHHHHH----CCCHHHHHHHHHTS-CC-HHHHH----HTCSEEEECSS
T ss_pred CCEEEEEcCCHHHHHHHHHHcC----CCCHHHHHHHHHHc-CC-hHhhH----hhCCEEEECCC
Confidence 4899999999999999999996 78999999988874 44 33343 47999998864
No 75
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=97.24 E-value=0.00034 Score=56.95 Aligned_cols=73 Identities=14% Similarity=0.139 Sum_probs=49.3
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHh
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIH 78 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~ 78 (301)
++.||+++|.++++.|...|+..+++.+.+++.+.+.+..+.. ..+....||++|++.++.....+.+.+.+.
T Consensus 103 ~~~i~l~~~~~~~~~R~~~R~~~~~~~~~~~~~~r~~~~~~~~----~~~~~~~ad~vId~~~~~~~~~~~i~~~l~ 175 (179)
T 3lw7_A 103 VYIVAVHSPPKIRYKRMIERLRSDDSKEISELIRRDREELKLG----IGEVIAMADYIITNDSNYEEFKRRCEEVTD 175 (179)
T ss_dssp EEEEEEECCHHHHHHHHHTCC----CCCHHHHHHHHHHHHHHT----HHHHHHTCSEEEECCSCHHHHHHHHHHHHH
T ss_pred cEEEEEECCHHHHHHHHHhccCCCCcchHHHHHHHHHhhhccC----hHhHHHhCCEEEECCCCHHHHHHHHHHHHH
Confidence 4789999999999999999987777889999998875433221 345567899999975533333344444443
No 76
>4i1u_A Dephospho-COA kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.05A {Burkholderia vietnamiensis} PDB: 4i1v_A*
Probab=97.10 E-value=0.00099 Score=58.33 Aligned_cols=53 Identities=23% Similarity=0.248 Sum_probs=45.2
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCC
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRG 63 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~ 63 (301)
+|..|||++|.++|+.|-+.|| |.+.+++.+.+.+ ..|.. +.++.||+||+|+
T Consensus 132 ~D~vi~V~ap~e~r~~Rl~~Rd----g~s~eea~~ri~~-Q~~~e-----ek~~~AD~VIdN~ 184 (210)
T 4i1u_A 132 CDRVLVVDCPVDTQIARVMQRN----GFTREQVEAIIAR-QATRE-----ARLAAADDVIVND 184 (210)
T ss_dssp CSEEEEEECCHHHHHHHHHHHH----CCCHHHHHHHHHH-SCCHH-----HHHHTCSEEEECS
T ss_pred CCeEEEEECCHHHHHHHHHhcC----CCCHHHHHHHHHH-cCChH-----HHHHhCCEEEECC
Confidence 6899999999999999999998 8999999998876 44543 3458999999986
No 77
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=97.01 E-value=0.00025 Score=60.57 Aligned_cols=71 Identities=10% Similarity=0.054 Sum_probs=50.6
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEe--ecCCCCCchhHHHHHHHHh
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVI--IPRGGDNHVAIDLIVQHIH 78 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADii--i~~~~~~~~~~~~i~~~i~ 78 (301)
+|+.||+++|.++++.|+..|. ++.+...+.|.++++|.|..+.+-.++.||.+ |+++.+ ++.+.+.|.
T Consensus 130 ~d~~i~l~~~~~~~~~R~~~R~-----~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Id~~~~----~eev~~~I~ 200 (207)
T 2qt1_A 130 WNRSYFLTIPYEECKRRRSTRV-----YQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKS----EEDLFLQVY 200 (207)
T ss_dssp CSEEEEEECCHHHHHHHHHHSC-----CSSCCCTTHHHHTHHHHHHHHHHHGGGCSSCCEEEETTSC----HHHHHHHHH
T ss_pred cCeeEEEECCHHHHHHHHHHcC-----CCccchHHHHHHHHhHHHHHHHHHHHhcCCeEEEecCCCC----HHHHHHHHH
Confidence 4889999999999999887663 44444555677678889888887777888877 877543 444444444
Q ss_pred hh
Q 022183 79 TK 80 (301)
Q Consensus 79 ~~ 80 (301)
+.
T Consensus 201 ~~ 202 (207)
T 2qt1_A 201 ED 202 (207)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 78
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=96.93 E-value=0.0015 Score=55.23 Aligned_cols=56 Identities=20% Similarity=0.324 Sum_probs=41.1
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhccccccccc-EeecCCC
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYAD-VIIPRGG 64 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~AD-iii~~~~ 64 (301)
.|++|||++|.++++.|+..|+. .+.+++.+.+.+ +.+.|..+. +..|| ++|++++
T Consensus 136 ~d~~i~l~a~~e~~~~R~~~r~~----~~~~~~~~~~~~-R~~~~~~~~---~~~ad~~~Id~~~ 192 (208)
T 3ake_A 136 AAHKFYLTASPEVRAWRRARERP----QAYEEVLRDLLR-RDERDKAQS---APAPDALVLDTGG 192 (208)
T ss_dssp CSEEEEEECCHHHHHHHHHHTSS----SCHHHHHHHHHH-HHHTC--CC---CCCTTCEEEETTT
T ss_pred CcEEEEEECCHHHHHHHHHhhcc----cCHHHHHHHHHH-HHHHHhhcc---cCCCCEEEEECCC
Confidence 47899999999999999988853 567777777765 444444433 56788 9998754
No 79
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=96.60 E-value=0.0049 Score=52.84 Aligned_cols=70 Identities=19% Similarity=0.180 Sum_probs=49.3
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhh
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (301)
+|+.||+++|.++++.|...|+ |.+.+++.+.+.+ ..+.+. ..+.||++|+++.+.....+.|.+.+...
T Consensus 126 ~d~vi~l~~~~e~~~~Rl~~R~----~~~~~~~~~~~~~-~~~~~~-----~~~~ad~vId~~~~~~~~~~~I~~~l~~~ 195 (218)
T 1vht_A 126 ANRVLVVDVSPETQLKRTMQRD----DVTREHVEQILAA-QATREA-----RLAVADDVIDNNGAPDAIASDVARLHAHY 195 (218)
T ss_dssp CSEEEEEECCHHHHHHHHHHHH----TCCHHHHHHHHHH-SCCHHH-----HHHHCSEEEECSSCTTSHHHHHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHcC----CCCHHHHHHHHHh-cCChHH-----HHHhCCEEEECCCCHHHHHHHHHHHHHHH
Confidence 4789999999999999988875 5677777777665 455433 23578999998764444445555555443
No 80
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=96.59 E-value=0.0034 Score=53.15 Aligned_cols=67 Identities=24% Similarity=0.340 Sum_probs=46.7
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhh
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (301)
+|..||+++|.++++.|...| |.+.+++.+.+.+ ..|. .+.++.||++|++.. .++.+.+.|.+.
T Consensus 124 ~~~~i~l~~~~e~~~~Rl~~R-----~~~~~~~~~~~~~-~~~~-----~~~~~~ad~vId~~~----~~~~~~~~i~~~ 188 (204)
T 2if2_A 124 YDKLIVVYAPYEVCKERAIKR-----GMSEEDFERRWKK-QMPI-----EEKVKYADYVIDNSG----SIEETYKQVKKV 188 (204)
T ss_dssp SSEEEEECCCHHHHHHHHHHT-----CCCHHHHHHHHTT-SCCH-----HHHGGGCSEECCCSS----CHHHHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHc-----CCCHHHHHHHHHh-CCCh-----hHHHhcCCEEEECCC----CHHHHHHHHHHH
Confidence 478999999999999998876 6788887777665 3442 234567999998753 244455555544
Q ss_pred cc
Q 022183 81 LG 82 (301)
Q Consensus 81 l~ 82 (301)
+.
T Consensus 189 l~ 190 (204)
T 2if2_A 189 YE 190 (204)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 81
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=96.56 E-value=0.0024 Score=53.62 Aligned_cols=71 Identities=14% Similarity=0.362 Sum_probs=49.0
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCCCHHHHH-HHHHhhccchhHhhccccc-ccccEeecCCCCCchhHHHHHHHHh
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVL-EQYAKFVKPAFDDFVLPSK-KYADVIIPRGGDNHVAIDLIVQHIH 78 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~-~~~~~~~~p~~~~~i~P~~-~~ADiii~~~~~~~~~~~~i~~~i~ 78 (301)
.|+.||+++|.++++.|-.. |||+.+... .+|.+.++..|..+.++.+ ..||++|+++. .++.+.+.|.
T Consensus 125 ~d~vi~L~~~~e~~~~Rl~~-----R~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Id~~~----~~~~v~~~I~ 195 (205)
T 2jaq_A 125 FDIVIYLRVSTKTAISRIKK-----RGRSEELLIGEEYWETLNKNYEEFYKQNVYDFPFFVVDAEL----DVKTQIELIM 195 (205)
T ss_dssp CSEEEEEECCHHHHHHHHHH-----HTCHHHHHSCHHHHHHHHHHHHHHHHHHTTTSCEEEEETTS----CHHHHHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHH-----cCChhhhcCcHHHHHHHHHHHHHHHHHccccCcEEEEECCC----CHHHHHHHHH
Confidence 37899999999999887543 577766532 2555667778888777776 78999999755 2344444444
Q ss_pred hh
Q 022183 79 TK 80 (301)
Q Consensus 79 ~~ 80 (301)
+.
T Consensus 196 ~~ 197 (205)
T 2jaq_A 196 NK 197 (205)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 82
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A*
Probab=96.49 E-value=0.0013 Score=57.40 Aligned_cols=60 Identities=15% Similarity=0.339 Sum_probs=41.1
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCCCHHHHH-HHHHhhccchhHhhcccc--ccccc-EeecCCCC
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVL-EQYAKFVKPAFDDFVLPS--KKYAD-VIIPRGGD 65 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~-~~~~~~~~p~~~~~i~P~--~~~AD-iii~~~~~ 65 (301)
.|+.||+|+|.++++.|-..| ||+.+... .+|.+.++..|.++.+.. +..++ ++|+++.+
T Consensus 147 pD~vi~Ld~~~e~~~~Ri~~R-----~r~~e~~~~~~~~~rv~~~~~~~~~~~~~~~~~~~~vId~~~~ 210 (230)
T 2vp4_A 147 ADLIIYLRTSPEVAYERIRQR-----ARSEESCVPLKYLQELHELHEDWLIHQRRPQSCKVLVLDADLN 210 (230)
T ss_dssp CSEEEEEECCHHHHHHHHHHH-----CCGGGTTCCHHHHHHHHHHHHHHHTSCCSSCCCEEEEEECCC-
T ss_pred CCEEEEEeCCHHHHHHHHHHc-----CCcccccCcHHHHHHHHHHHHHHHHHhcccCCCCEEEEECCCC
Confidence 489999999999999996665 44433311 256677888898887433 34454 88887543
No 83
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=96.42 E-value=0.0038 Score=52.46 Aligned_cols=54 Identities=20% Similarity=0.311 Sum_probs=39.7
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCC
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGG 64 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~ 64 (301)
.|+.||+++|.++++.|...|+ |.+.+++...+.+ ..+.+ +....||++|+++.
T Consensus 125 ~d~~i~l~~~~e~~~~R~~~R~----~~~~~~~~~~i~~-~~~~~-----~~~~~ad~vId~~~ 178 (203)
T 1uf9_A 125 LHGTLLVAAPLEERVRRVMARS----GLSREEVLARERA-QMPEE-----EKRKRATWVLENTG 178 (203)
T ss_dssp SSEEEEECCCHHHHHHHHHTTT----CCTTHHHHHHHTT-SCCHH-----HHHHHCSEEECCSS
T ss_pred CCEEEEEECCHHHHHHHHHHcC----CCCHHHHHHHHHH-CCChh-----HHHHhCCEEEECCC
Confidence 3789999999999999998875 5666666666554 44433 22467999998754
No 84
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=96.35 E-value=0.0041 Score=53.34 Aligned_cols=43 Identities=9% Similarity=-0.020 Sum_probs=32.9
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCC
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGD 65 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~ 65 (301)
+|..|||++|.++|+.|.+ -.| +..|.++.+++||+||+|+++
T Consensus 130 ~d~vi~v~a~~e~r~~Rli--------------~~q--------~~~~~~~~~~~AD~vI~n~~~ 172 (192)
T 2grj_A 130 CDHVITVVASRETILKRNR--------------EAD--------RRLKFQEDIVPQGIVVANNST 172 (192)
T ss_dssp CSEEEEEECCHHHHHHHCS--------------SHH--------HHHTTCTTCCCCSEEEECSSC
T ss_pred CCEEEEEECCHHHHHHHHH--------------Hhc--------CCchhhhHHhcCCEEEECCCC
Confidence 5889999999999999981 122 233567778999999998643
No 85
>2ocp_A DGK, deoxyguanosine kinase; protein-nucleotide complex, transferase; HET: DTP; 2.80A {Homo sapiens} SCOP: c.37.1.1
Probab=95.56 E-value=0.011 Score=51.51 Aligned_cols=76 Identities=12% Similarity=0.231 Sum_probs=50.8
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCCCHHHH-HHHHHhhccchhHhhcccc---------cccccEeecCCCC---Cc
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSV-LEQYAKFVKPAFDDFVLPS---------KKYADVIIPRGGD---NH 67 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v-~~~~~~~~~p~~~~~i~P~---------~~~ADiii~~~~~---~~ 67 (301)
.|+.||+++|.++++.|-..| |+..+.. -.+|.+.++..|+.|.++. .....++|+++.+ +.
T Consensus 150 pd~~i~l~~~~~~~~~R~~~R-----~r~~e~~~~~~~~~~v~~~y~~~~~~~~~p~~~~~~~~~~~~~Id~~~~~~~v~ 224 (241)
T 2ocp_A 150 LHGFIYLQASPQVCLKRLYQR-----AREEEKGIELAYLEQLHGQHEAWLIHKTTKLHFEALMNIPVLVLDVNDDFSEEV 224 (241)
T ss_dssp CCEEEEEECCHHHHHHHHHHS-----CCTTTTTCCHHHHHHHHHHHHHHHTSCCSCCCCTTGGGCCEEEEECCSCTTTCH
T ss_pred CCEEEEEECCHHHHHHHHHhc-----CCcccccCCHHHHHHHHHHHHHHHhhccccccccccCCCCEEEEECCCChhhCH
Confidence 388999999999999886544 4443332 2356667889999988762 2345567776553 22
Q ss_pred hhHHHHHHHHhhhc
Q 022183 68 VAIDLIVQHIHTKL 81 (301)
Q Consensus 68 ~~~~~i~~~i~~~l 81 (301)
..+..+++.|.+.+
T Consensus 225 ~~i~~i~~~i~~~l 238 (241)
T 2ocp_A 225 TKQEDLMREVNTFV 238 (241)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 35677777776654
No 86
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=95.33 E-value=0.0096 Score=48.48 Aligned_cols=71 Identities=23% Similarity=0.329 Sum_probs=42.4
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCC---CHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHh
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGR---DVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIH 78 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~---~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~ 78 (301)
|+.||+++|.++++.|-..|+ .|.. ..+.+.+.|.. ..| ..++ ||++| ++.. .++.+.+.|.
T Consensus 94 ~~~i~l~~~~e~~~~R~~~r~--~r~~~~~~~~~i~~~~~~-~~~-------~~~~-~~~~i-~~~~---~~~~~~~~i~ 158 (168)
T 2pt5_A 94 GTTVFIDIPFEVFLERCKDSK--ERPLLKRPLDEIKNLFEE-RRK-------IYSK-ADIKV-KGEK---PPEEVVKEIL 158 (168)
T ss_dssp SEEEEEECCHHHHHHHCBCTT--CCBGGGSCGGGTHHHHHH-HHH-------HHTT-SSEEE-ECSS---CHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHhCCC--CCCCCcchHHHHHHHHHH-HHH-------HHHh-CCEEE-CCCC---CHHHHHHHHH
Confidence 789999999999999877764 2211 13334444443 222 2234 99999 5422 3556666666
Q ss_pred hhccccccc
Q 022183 79 TKLGQHDLC 87 (301)
Q Consensus 79 ~~l~~~~l~ 87 (301)
+.+.+..+|
T Consensus 159 ~~l~~~~~~ 167 (168)
T 2pt5_A 159 LSLEGNALG 167 (168)
T ss_dssp HHHHTSCC-
T ss_pred HHHHhccCC
Confidence 666655544
No 87
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=95.08 E-value=0.032 Score=46.88 Aligned_cols=57 Identities=19% Similarity=0.440 Sum_probs=38.1
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCC---CHHHH---HHHHHhhccchhHhhcccccccccEe--ecCC
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGR---DVDSV---LEQYAKFVKPAFDDFVLPSKKYADVI--IPRG 63 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~---~~~~v---~~~~~~~~~p~~~~~i~P~~~~ADii--i~~~ 63 (301)
.|+.||+++|.++++.|...|+.. +|+ +.+.+ +..|.+...|.++.|- .+|.+ |+++
T Consensus 121 ~~~~i~l~~~~e~~~~Rl~~R~~~-~~~~~~~~e~~~~r~~~~~~~~~~~~~~~~-----~~~~vi~id~~ 185 (203)
T 1ukz_A 121 SKFILFFDCPEDIMLERLLERGKT-SGRSDDNIESIKKRFNTFKETSMPVIEYFE-----TKSKVVRVRCD 185 (203)
T ss_dssp CSEEEEEECCHHHHHHHHHHHHHH-HCCTTCSHHHHHHHHHHHHHTTHHHHHHHH-----TTTCEEEEECS
T ss_pred CCEEEEEECCHHHHHHHHHhcccc-CCCCCCCHHHHHHHHHHHHHhhHHHHHHHH-----hcCcEEEEECC
Confidence 378999999999999999888642 233 35555 4445555667666652 45643 5664
No 88
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=95.06 E-value=0.028 Score=46.49 Aligned_cols=53 Identities=17% Similarity=0.311 Sum_probs=32.8
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCC
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRG 63 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~ 63 (301)
.|+.||+++|.++++.|...||..+ .+ ++.+.++..|+.+..-. .++++|++.
T Consensus 123 ~d~vi~l~~~~e~~~~Rl~~r~~~~----~~----~~~~~~~~~~~~~~~~~--~~~~~Id~~ 175 (195)
T 2pbr_A 123 PDITLLLDIPVDIALRRLKEKNRFE----NK----EFLEKVRKGFLELAKEE--ENVVVIDAS 175 (195)
T ss_dssp CSEEEEEECCHHHHHHHHHTTTCCC----CH----HHHHHHHHHHHHHHHHS--TTEEEEETT
T ss_pred CCEEEEEeCCHHHHHHHhhccCccc----hH----HHHHHHHHHHHHHHhhC--CCEEEEECC
Confidence 4789999999999999877654322 22 23333444555543211 245999874
No 89
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=94.55 E-value=0.085 Score=44.35 Aligned_cols=70 Identities=16% Similarity=0.112 Sum_probs=44.2
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhhc
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKL 81 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l 81 (301)
++.||+++|.++++.|-..|+.. ..+ +++++.+.+... .|....+|++|+++.. ++.+.+.|.+.+
T Consensus 112 ~~vi~l~~~~e~~~~Rl~~R~~~--~~~-~~~~~~~~~~~~-------~~~~~~~~~~Id~~~~----~~e~~~~I~~~l 177 (202)
T 3t61_A 112 LAFVFLHGSESVLAERMHHRTGH--FMP-SSLLQTQLETLE-------DPRGEVRTVAVDVAQP----LAEIVREALAGL 177 (202)
T ss_dssp CEEEEEECCHHHHHHHHHHHHSS--CCC-HHHHHHHHHHCC-------CCTTSTTEEEEESSSC----HHHHHHHHHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHhhcc--CCC-HHHHHHHHHhcC-------CCCCCCCeEEEeCCCC----HHHHHHHHHHHH
Confidence 47899999999999998888642 223 444444333233 4556779999998633 344444444444
Q ss_pred cccc
Q 022183 82 GQHD 85 (301)
Q Consensus 82 ~~~~ 85 (301)
.+.+
T Consensus 178 ~~~~ 181 (202)
T 3t61_A 178 ARLA 181 (202)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 4444
No 90
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=94.46 E-value=0.07 Score=43.95 Aligned_cols=71 Identities=17% Similarity=0.362 Sum_probs=44.9
Q ss_pred CeEEEEeCCchhHHHHHhhhccc-cCCC-CH---HHHHHHHHhhccchhHhhcccccccccE-eecCCCCCchhHHHHHH
Q 022183 2 NMKIFVDTDADVRLARRIRRDTV-ERGR-DV---DSVLEQYAKFVKPAFDDFVLPSKKYADV-IIPRGGDNHVAIDLIVQ 75 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~-erg~-~~---~~v~~~~~~~~~p~~~~~i~P~~~~ADi-ii~~~~~~~~~~~~i~~ 75 (301)
|+.||+++|.++++.|...|+.. .|-. +. +..+++|.+...|..+.|- +.+++ +|+++.. ++.+.+
T Consensus 115 ~~~i~l~~~~e~~~~R~~~R~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~y~----~~~~~~~id~~~~----~~~v~~ 186 (196)
T 1tev_A 115 SFVLFFDCNNEICIERCLERGKSSGRSDDNRESLEKRIQTYLQSTKPIIDLYE----EMGKVKKIDASKS----VDEVFD 186 (196)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHTSSCCSCCHHHHHHHHHHHHHHHHHHHHHHH----HTTCEEEEETTSC----HHHHHH
T ss_pred CEEEEEECCHHHHHHHHHcccccCCCCCCCHHHHHHHHHHHHHhHHHHHHHHH----hcCCEEEEECCCC----HHHHHH
Confidence 57899999999999999999753 2322 22 3456677776777555553 34675 7877422 344444
Q ss_pred HHhhh
Q 022183 76 HIHTK 80 (301)
Q Consensus 76 ~i~~~ 80 (301)
.|.+.
T Consensus 187 ~i~~~ 191 (196)
T 1tev_A 187 EVVQI 191 (196)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 91
>1p5z_B DCK, deoxycytidine kinase; nucleoside kinase, P-loop, ARAC, cytarabine, transferase; HET: AR3 ADP; 1.60A {Homo sapiens} SCOP: c.37.1.1 PDB: 1p60_A* 1p61_B* 1p62_B* 2a7q_A* 2qrn_A* 2qro_A* 3exk_A* 3hp1_A* 2no7_A* 2no1_A* 2no6_A* 2no0_A* 2no9_A* 2noa_A* 2zi5_A* 2zi4_A* 2zi6_A* 2zi7_B* 2zia_A* 3kfx_A* ...
Probab=94.42 E-value=0.094 Score=46.24 Aligned_cols=74 Identities=15% Similarity=0.232 Sum_probs=41.4
Q ss_pred CeEEEEeCCchhHHHHHhhhcc-ccCCCC---HHHHHHHHHhh-----ccchhHhhcccccccccEeecCCCCCchhHHH
Q 022183 2 NMKIFVDTDADVRLARRIRRDT-VERGRD---VDSVLEQYAKF-----VKPAFDDFVLPSKKYADVIIPRGGDNHVAIDL 72 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~-~erg~~---~~~v~~~~~~~-----~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~ 72 (301)
|+.||+++|.++++.|...|.- .+++.+ .+.+.+.|..+ +++.|..|- +...++|+.+.......+.
T Consensus 176 d~vi~L~~~~e~~~~Ri~~R~r~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~~~~----~~~~~~Id~~~~~eev~~~ 251 (263)
T 1p5z_B 176 DGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQ----EVPILTLDVNEDFKDKYES 251 (263)
T ss_dssp SEEEEEECCHHHHHHHHHHHCCGGGTTCCHHHHHHHHHHHHHHHTTCCCCCSCGGGG----GSCEEEEECCSCHHHHHHH
T ss_pred CeEEEEECCHHHHHHHHHhcCCccccCccHHHHHHHHHHHHHHHhhccchhhhhhhc----cCCEEEEECCCCHHHHHHH
Confidence 7899999999999998776632 133333 22333334333 445554442 2347888875532233344
Q ss_pred HHHHHhh
Q 022183 73 IVQHIHT 79 (301)
Q Consensus 73 i~~~i~~ 79 (301)
|.+.|..
T Consensus 252 I~~~l~~ 258 (263)
T 1p5z_B 252 LVEKVKE 258 (263)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 92
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=94.22 E-value=0.12 Score=43.08 Aligned_cols=73 Identities=14% Similarity=0.276 Sum_probs=44.3
Q ss_pred CeEEEEeCCchhHHHHHh-hhccccC---CCC-------HHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhH
Q 022183 2 NMKIFVDTDADVRLARRI-RRDTVER---GRD-------VDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAI 70 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri-~RD~~er---g~~-------~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~ 70 (301)
|+.||+++|.++++.|-. .|+...| |.+ .+.. ..|.+.+++.|.++... +++++|+++..-....
T Consensus 123 ~~vi~l~~~~e~~~~Rl~~~R~~~~~~~~g~~~~~~~d~~e~~-~~~~~r~~~~~~~~~~~---~~~~~Id~~~~~e~v~ 198 (213)
T 2plr_A 123 DITFYIRVSPDIALERIKKSKRKIKPQEAGADIFPGLSPEEGF-LKYQGLITEVYDKLVKD---ENFIVIDGTKTPKEIQ 198 (213)
T ss_dssp SEEEEEECCHHHHHHHHHHTTCCCCTTTTTTTTCTTSCHHHHH-HHHHHHHHHHHHHHTTT---TTCEEEETTSCHHHHH
T ss_pred CEEEEEeCCHHHHHHHHhcccccccccccccccccccchhhhH-HHHHHHHHHHHHHHHhh---CCEEEEECCCCHHHHH
Confidence 789999999999988877 6753222 221 3333 45666677777777533 3789998753322233
Q ss_pred HHHHHHHh
Q 022183 71 DLIVQHIH 78 (301)
Q Consensus 71 ~~i~~~i~ 78 (301)
+.|.+.+.
T Consensus 199 ~~I~~~l~ 206 (213)
T 2plr_A 199 IQIRKFVG 206 (213)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 34444443
No 93
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=94.20 E-value=0.032 Score=46.66 Aligned_cols=68 Identities=15% Similarity=0.239 Sum_probs=24.4
Q ss_pred eEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHh
Q 022183 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIH 78 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~ 78 (301)
..|||.+|+...|.+|+. +||++.++.+++.....+... .+.. +..+|+||.|. +...+.+.+.+.|.
T Consensus 116 ~~i~i~~p~~~~l~~Rl~----~Rg~~~~~~i~~rl~~~~~~~-~~~~--~~~~d~vi~nd-~~~~a~~~l~~~i~ 183 (186)
T 3a00_A 116 RFLFIAPPSVEDLKKRLE----GRGTETEESINKRLSAAQAEL-AYAE--TGAHDKVIVND-DLDKAYKELKDFIF 183 (186)
T ss_dssp EEEEEECSCC----------------------------------------CCCCSEEEECS-SHHHHHHHHHHHHT
T ss_pred EEEEEECcCHHHHHHHHH----hcCCCCHHHHHHHHHHHHHHH-Hhhc--ccCCcEEEECc-CHHHHHHHHHHHHH
Confidence 469999999777777765 688888888877666565432 2222 56899999874 44455555555443
No 94
>3fdi_A Uncharacterized protein; cytidylate kinase like protein, PSI, MCSG, PRK04182 class ME structural genomics, protein structure initiative; 2.20A {Eubacterium ventriosum}
Probab=94.06 E-value=0.053 Score=46.43 Aligned_cols=73 Identities=23% Similarity=0.309 Sum_probs=45.9
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHH---HhhccchhHhh--ccccc-ccccEeecCCCCC-chhHHHHH
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQY---AKFVKPAFDDF--VLPSK-KYADVIIPRGGDN-HVAIDLIV 74 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~---~~~~~p~~~~~--i~P~~-~~ADiii~~~~~~-~~~~~~i~ 74 (301)
.++||+++|.+.|..|+..| .|.+.+++.+.. .+.+++-|..| +.|.. ..+|++|+.+.-. ..+++.|+
T Consensus 118 ~~~V~L~A~~e~r~~R~~~~----~~~~~~~~~~~i~~~d~~R~~~y~~~~~~~~~~~~~~dl~Idt~~l~~eevv~~I~ 193 (201)
T 3fdi_A 118 MISAFILGDKDTKTKRVMER----EGVDEKTALNMMKKMDKMRKVYHNFYCESKWGDSRTYDICIKIGKVDVDTATDMII 193 (201)
T ss_dssp EEEEEEEECHHHHHHHHHHH----HTCCHHHHHHHHHHHHHHHHHHHHHHCSSCTTBGGGCSEEEEESSSCHHHHHHHHH
T ss_pred eEEEEEECCHHHHHHHHHHH----hCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCEEEECCCCCHHHHHHHHH
Confidence 37999999999999998876 355655544332 34455656655 33433 3589999986543 23344555
Q ss_pred HHHh
Q 022183 75 QHIH 78 (301)
Q Consensus 75 ~~i~ 78 (301)
+.++
T Consensus 194 ~~i~ 197 (201)
T 3fdi_A 194 KYID 197 (201)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 95
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=94.06 E-value=0.06 Score=43.50 Aligned_cols=70 Identities=9% Similarity=0.024 Sum_probs=40.5
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCC-CCchhHHHHHHHHhh
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGG-DNHVAIDLIVQHIHT 79 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~-~~~~~~~~i~~~i~~ 79 (301)
|+.||+++|.++.+.|-..|. |...-.+ +.+.++..|+...... ..++++|++++ .-....+.|.+.++.
T Consensus 96 ~~~i~l~~~~e~~~~R~~~r~---r~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~id~~~~~~~ev~~~I~~~~~~ 166 (173)
T 3kb2_A 96 AKVVYLHADPSVIKKRLRVRG---DEYIEGK----DIDSILELYREVMSNA-GLHTYSWDTGQWSSDEIAKDIIFLVEL 166 (173)
T ss_dssp EEEEEEECCHHHHHHHHHHHS---CSCCCHH----HHHHHHHHHHHHHHTC-SSCEEEEETTTSCHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHhcC---Ccchhhh----HHHHHHHHHHHHHhhc-CCCEEEEECCCCCHHHHHHHHHHHHhC
Confidence 688999999999988877661 2222122 2223444555543333 36999999754 223334455554444
No 96
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=94.02 E-value=0.099 Score=44.18 Aligned_cols=70 Identities=13% Similarity=0.143 Sum_probs=39.5
Q ss_pred eEEEEeCCchhHHHHHhhhccccCCCC-HHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhhc
Q 022183 3 MKIFVDTDADVRLARRIRRDTVERGRD-VDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKL 81 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rri~RD~~erg~~-~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l 81 (301)
+.||+++++...+.+|+. +||++ .+.+.+.+.+..++.... ....||++|.+. +...+.+.+.+.|+..+
T Consensus 128 ~~i~l~~~s~e~l~~Rl~----~R~~~~~~~i~~rl~~~~~~~~~~----~~~~~d~vi~n~-~~e~~~~~i~~~i~~~~ 198 (204)
T 2qor_A 128 IYIFVKPPSIDILLGRLK----NRNTEKPEEINKRMQELTREMDEA----DKVGFNYFIVND-DLARTYAELREYLLGSY 198 (204)
T ss_dssp EEEEEECSCHHHHHHHHH----TCTTSCHHHHHHHHHHHHHHHHHH----HHHTCSEEEECS-SHHHHHHHHHHHHHHHC
T ss_pred EEEEEcCCCHHHHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHh----hhccCcEEEECc-CHHHHHHHHHHHHHHHh
Confidence 689999555555556653 36654 444444444323332211 456799999875 44455566666665543
No 97
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=93.59 E-value=0.12 Score=42.32 Aligned_cols=57 Identities=23% Similarity=0.448 Sum_probs=36.7
Q ss_pred CeEEEEeCCchhHHHHHhhhccc-cCCC-CHHHH---HHHHHhhccchhHhhccccccccc--EeecCC
Q 022183 2 NMKIFVDTDADVRLARRIRRDTV-ERGR-DVDSV---LEQYAKFVKPAFDDFVLPSKKYAD--VIIPRG 63 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~-erg~-~~~~v---~~~~~~~~~p~~~~~i~P~~~~AD--iii~~~ 63 (301)
|+.||+++|.++++.|-..|+.. .|.. +.+.+ ++.|.....|.++.| +.+| ++|+++
T Consensus 112 ~~vi~l~~~~e~~~~R~~~R~~~~~r~~~~~~~~~~ri~~~~~~~~~~~~~~-----~~~~~~~~id~~ 175 (194)
T 1qf9_A 112 KFVLFFDCPEEVMTQRLLKRGESSGRSDDNIESIKKRFNTFNVQTKLVIDHY-----NKFDKVKIIPAN 175 (194)
T ss_dssp EEEEEEECCHHHHHHHHHHHHTTSCCTTCSHHHHHHHHHHHHHTHHHHHHHH-----HHTTCEEEEECS
T ss_pred CEEEEEECCHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHhHHHHHHHH-----HhCCCEEEEECC
Confidence 67899999999999998888642 2322 23443 333444455655555 3467 778875
No 98
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=93.51 E-value=0.055 Score=44.91 Aligned_cols=68 Identities=12% Similarity=0.220 Sum_probs=37.4
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHh
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIH 78 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~ 78 (301)
|+.||+++|.++++.|...||..+. + ++.+.++..|....... ....++|+++.+-....+.+.+.+.
T Consensus 123 d~vi~l~~~~e~~~~Rl~~R~~~~~----~----~~~~~~~~~~~~~~~~~-~~~~~~Id~~~~~e~~~~~i~~~l~ 190 (197)
T 2z0h_A 123 DLTFYIDVDVETALKRKGELNRFEK----R----EFLERVREGYLVLAREH-PERIVVLDGKRSIEEIHRDVVREVK 190 (197)
T ss_dssp SEEEEEECCHHHHHHHC---CCCCC----H----HHHHHHHHHHHHHHHHC-TTTEEEEETTSCHHHHHHHHHHHTT
T ss_pred CEEEEEeCCHHHHHHHHhccCcccH----H----HHHHHHHHHHHHHHHhC-CCCEEEEeCCCCHHHHHHHHHHHHH
Confidence 7899999999999999988843322 2 33334555555543322 2345778864433333344444443
No 99
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=93.48 E-value=0.024 Score=53.08 Aligned_cols=46 Identities=9% Similarity=0.144 Sum_probs=39.3
Q ss_pred EEEe-CCch--hHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccc
Q 022183 5 IFVD-TDAD--VRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKK 54 (301)
Q Consensus 5 ifvd-~~~d--~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~ 54 (301)
+|++ +|.+ +|+.||+.| ..++|+ +++.+|++.+.|.|.++|.|.-.
T Consensus 118 ~~~~~~d~~~~~Rlrrrl~r-~~~~G~---~~l~~~L~~vdP~~a~~I~p~d~ 166 (340)
T 3d3q_A 118 FEDESISEDKMKQVKLKLKE-LEHLNN---NKLHEYLASFDKESAKDIHPNNR 166 (340)
T ss_dssp CC---CCHHHHHHHHHHHHT-TSSSCH---HHHHHHHHHHCHHHHHHSCTTCH
T ss_pred ccCCCCChHHHHHHHHHHHH-HHhcCH---HHHHHHHHhhCcHHHhhcCccCc
Confidence 6888 8888 899999999 999997 48999999999999999988754
No 100
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=93.46 E-value=0.26 Score=41.39 Aligned_cols=72 Identities=19% Similarity=0.321 Sum_probs=42.4
Q ss_pred CeEEEEeCCchhHHHHHh-hhcccc--CCCCHHHH---HHHHHhhccchhHhhcccccccccEeecCCC-CCchhHHHHH
Q 022183 2 NMKIFVDTDADVRLARRI-RRDTVE--RGRDVDSV---LEQYAKFVKPAFDDFVLPSKKYADVIIPRGG-DNHVAIDLIV 74 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri-~RD~~e--rg~~~~~v---~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~-~~~~~~~~i~ 74 (301)
++.||+++|.++++.|-. .|.... .+.+.+++ +.++...+.|.| .+ ||++|++.+ .-....+.|.
T Consensus 119 ~~vi~L~~~~e~l~~Rl~~~~~~Rp~~~~~~~~~~~~~i~~~~~~r~~~y-------~~-ad~~Idt~~~s~ee~~~~I~ 190 (199)
T 3vaa_A 119 GKTVFLNVHPDVLFRRLRIAKQQRPILQGKEDDELMDFIIQALEKRAPFY-------TQ-AQYIFNADELEDRWQIESSV 190 (199)
T ss_dssp SEEEEEECCHHHHHHHHHHTGGGCGGGTTCCHHHHHHHHHHHHHHHHHHH-------TT-SSEEEECCCCSSHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHhcCCCCCCCcCCCChhhHHHHHHHHHHHHHHHH-------hh-CCEEEECCCCCHHHHHHHHH
Confidence 578999999999866654 221111 24444332 333333344433 22 899999866 3445566777
Q ss_pred HHHhhhc
Q 022183 75 QHIHTKL 81 (301)
Q Consensus 75 ~~i~~~l 81 (301)
+.+...|
T Consensus 191 ~~l~~~l 197 (199)
T 3vaa_A 191 QRLQELL 197 (199)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 7776654
No 101
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=93.36 E-value=0.058 Score=43.92 Aligned_cols=66 Identities=15% Similarity=0.307 Sum_probs=38.5
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCC--CHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhh
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGR--DVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHT 79 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~--~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~ 79 (301)
|+.||+++|.++++.|...|....|+. +.+.+...|.+ +.|.| +++||++|++++ .++.+.+.|.+
T Consensus 98 ~~vi~l~~~~e~~~~Rl~~r~~~~r~~~~~~~~~~~~~~~-r~~~~-------~~~a~~~Id~~~----~~e~~~~~I~~ 165 (168)
T 1zuh_A 98 GTTFYLKMDFETLIKRLNQKEREKRPLLNNLTQAKELFEK-RQALY-------EKNASFIIDARG----GLNNSLKQVLQ 165 (168)
T ss_dssp EEEEEEECCHHHHHHHHCC--------CCTTHHHHHHHHH-HHHHH-------HHTCSEEEEGGG----CHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHhccCCCCCCCccCHHHHHHHHHH-HHHHH-------HHHCCEEEECCC----CHHHHHHHHHH
Confidence 689999999999999877662112221 14555555544 44433 345899998754 34455555543
No 102
>3hdt_A Putative kinase; structura genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.79A {Clostridium symbiosum atcc 14940}
Probab=93.34 E-value=0.13 Score=44.95 Aligned_cols=72 Identities=22% Similarity=0.187 Sum_probs=45.3
Q ss_pred eEEEEeCCchhHHHHHhhhccccCCCCHHHH---HHHHHhhccchhHhhc--cccc-ccccEeecCCCCCc-hhHHHHHH
Q 022183 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSV---LEQYAKFVKPAFDDFV--LPSK-KYADVIIPRGGDNH-VAIDLIVQ 75 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v---~~~~~~~~~p~~~~~i--~P~~-~~ADiii~~~~~~~-~~~~~i~~ 75 (301)
++||+++|.+.|..|...| .|++.++. +.+..+.++|-|..|- .|.. ..+|++|+.+.-.. .+++.|++
T Consensus 139 ~~VfL~A~~e~r~~Ri~~~----~~~~~~~a~~~I~~~d~~R~~~Y~~ytg~~~~~~~~~dl~IdT~~l~~eevv~~I~~ 214 (223)
T 3hdt_A 139 IRIFVYTDKVKKVQRVMEV----DCIDEERAKRRIKKIEKERKEYYKYFTGSEWHSMKNYDLPINTTKLTLEETAELIKA 214 (223)
T ss_dssp EEEEEECCHHHHHHHHHHH----HTCCHHHHHHHHHHHHHHHHHHHHHHHSSCTTCGGGCSEEEECTTCCHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcccCeEEEECCCCCHHHHHHHHHH
Confidence 7999999999999998766 35565444 3344444666666552 2222 46999999754332 33445555
Q ss_pred HHh
Q 022183 76 HIH 78 (301)
Q Consensus 76 ~i~ 78 (301)
.++
T Consensus 215 ~i~ 217 (223)
T 3hdt_A 215 YIR 217 (223)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 103
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=93.16 E-value=0.079 Score=43.98 Aligned_cols=23 Identities=22% Similarity=0.264 Sum_probs=19.8
Q ss_pred CCeEEEEeCCchhHHHHHhhhcc
Q 022183 1 MNMKIFVDTDADVRLARRIRRDT 23 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~ 23 (301)
.|+.||+++|.++++.|...|+.
T Consensus 116 ~~~~i~l~~~~~~~~~R~~~R~~ 138 (199)
T 2bwj_A 116 PQLVICMDCSADTMTNRLLQMSR 138 (199)
T ss_dssp CSEEEEEECCHHHHHHHHHHTCC
T ss_pred CCEEEEEECCHHHHHHHHHcCCC
Confidence 37899999999999888888864
No 104
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=93.06 E-value=0.12 Score=43.29 Aligned_cols=68 Identities=16% Similarity=0.207 Sum_probs=43.2
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCC-CCHHH---HHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHH
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERG-RDVDS---VLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHI 77 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg-~~~~~---v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i 77 (301)
|+.||+++|.++++.|-..|. |. .+.+. .++.|.....|.++.| ..++++|+++. .++.+.+.|
T Consensus 128 ~~vi~l~~~~e~~~~Rl~~R~---r~~~~~e~~~~r~~~~~~~~~~~~~~~-----~~~~~~Id~~~----~~eev~~~I 195 (201)
T 2cdn_A 128 DAVLEFRVSEEVLLERLKGRG---RADDTDDVILNRMKVYRDETAPLLEYY-----RDQLKTVDAVG----TMDEVFARA 195 (201)
T ss_dssp CEEEEEECCHHHHHHHHHHHC---CTTCSHHHHHHHHHHHHHHTTTHHHHT-----TTTEEEEECCS----CHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHcCC---CCCCCHHHHHHHHHHHHHhhHHHHHHh-----cCcEEEEeCCC----CHHHHHHHH
Confidence 689999999999988877773 21 13333 3445555556666666 46889998732 244555555
Q ss_pred hhhc
Q 022183 78 HTKL 81 (301)
Q Consensus 78 ~~~l 81 (301)
.+.+
T Consensus 196 ~~~l 199 (201)
T 2cdn_A 196 LRAL 199 (201)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 5443
No 105
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=92.83 E-value=0.12 Score=42.35 Aligned_cols=70 Identities=16% Similarity=0.202 Sum_probs=44.0
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCCC--HHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhh
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGRD--VDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHT 79 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~~--~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~ 79 (301)
++.||+++|.++++.|...|....|... .+.+.+.|.. +.|.|. +.+|++|+.+... ++.+.+.|.+
T Consensus 94 ~~~i~l~~~~e~~~~R~~~r~~~~r~~~~~~~~i~~~~~~-r~~~y~-------~~~~~~Idt~~~~---~eev~~~I~~ 162 (175)
T 1via_A 94 GFCIYLKADFEYLKKRLDKDEISKRPLFYDEIKAKKLYNE-RLSKYE-------QKANFILNIENKN---IDELLSEIKK 162 (175)
T ss_dssp CEEEEEECCHHHHTTCCCGGGTTTSCTTCCHHHHHHHHHH-HHHHHH-------HHCSEEEECTTCC---HHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHhcccCCCCCCcccHHHHHHHHHH-HHHHHH-------hcCCEEEECCCCC---HHHHHHHHHH
Confidence 5789999999999888776632233322 5556555554 444442 4589999875332 4555556655
Q ss_pred hcc
Q 022183 80 KLG 82 (301)
Q Consensus 80 ~l~ 82 (301)
.+.
T Consensus 163 ~l~ 165 (175)
T 1via_A 163 VIK 165 (175)
T ss_dssp HHC
T ss_pred HHH
Confidence 554
No 106
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=92.69 E-value=0.08 Score=43.74 Aligned_cols=78 Identities=17% Similarity=0.152 Sum_probs=45.7
Q ss_pred CeEEEEeCCchhHHHHHhhhccc-cC--CCCHHHHHH--HHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHH
Q 022183 2 NMKIFVDTDADVRLARRIRRDTV-ER--GRDVDSVLE--QYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQH 76 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~-er--g~~~~~v~~--~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~ 76 (301)
++.||+++|.++++.|-..|... +| +....+... ++.+ .|+.|..+....++++|+.+.......+.+++.
T Consensus 106 ~~~v~l~~~~e~~~~R~~~R~~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Idt~~~~~~~~~~i~~~ 181 (193)
T 2rhm_A 106 PIQIRCVASGDVLVERILSRIAQGARHPGHCDDRSPADLELVR----SRGDIPPLPLGGPLLTVDTTFPEQIDMNAIVQW 181 (193)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHTTCC--------CHHHHHHHH----HSCCCCCCCCCSCEEEEECSSGGGCCHHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHHHhcCccccCcccccCccCcchhhHH----HHhcCCCccCCCCEEEEeCCCCcccCHHHHHHH
Confidence 47899999999998887777532 23 111111122 2222 233443333347999999876655566778888
Q ss_pred Hhhhccc
Q 022183 77 IHTKLGQ 83 (301)
Q Consensus 77 i~~~l~~ 83 (301)
|.+.+..
T Consensus 182 i~~~l~~ 188 (193)
T 2rhm_A 182 VRQHLQS 188 (193)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8776543
No 107
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=92.47 E-value=0.12 Score=42.46 Aligned_cols=71 Identities=14% Similarity=0.218 Sum_probs=43.8
Q ss_pred CeEEEEeCCchhHHHHHhhhcccc--CCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhh
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVE--RGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHT 79 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~e--rg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~ 79 (301)
+..||+++|.++++.|-..|+... ...+.++.++.+...+.|.| ++.+|++|+++.. .++.+.+.|.+
T Consensus 95 ~~vV~L~~~~e~~~~Rl~~r~~r~~~~~~~~~~~i~~~~~~r~~~~-------~~~~~~~Idt~~~---s~ee~~~~I~~ 164 (184)
T 2iyv_A 95 HTVVYLEISAAEGVRRTGGNTVRPLLAGPDRAEKYRALMAKRAPLY-------RRVATMRVDTNRR---NPGAVVRHILS 164 (184)
T ss_dssp SCEEEEECCHHHHHHHTTCCCCCSSTTSCCHHHHHHHHHHHHHHHH-------HHHCSEEEECSSS---CHHHHHHHHHT
T ss_pred CeEEEEeCCHHHHHHHHhCCCCCCCccCCCHHHHHHHHHHHHHHHH-------hccCCEEEECCCC---CHHHHHHHHHH
Confidence 578999999999998876665321 12234444554443344433 3678999987533 24556666666
Q ss_pred hcc
Q 022183 80 KLG 82 (301)
Q Consensus 80 ~l~ 82 (301)
.+.
T Consensus 165 ~l~ 167 (184)
T 2iyv_A 165 RLQ 167 (184)
T ss_dssp TSC
T ss_pred HHh
Confidence 554
No 108
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=92.29 E-value=0.094 Score=43.54 Aligned_cols=60 Identities=13% Similarity=0.170 Sum_probs=42.0
Q ss_pred eEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhh
Q 022183 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHT 79 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~ 79 (301)
..|||++|+..+|.|| ++.++++.+..++.+..| ..++|++|.|. +...+.+.+.+.|.+
T Consensus 119 ~~ifi~~p~~~~l~~R------------~~~i~r~~~~~~~~~~~~----~~~~d~~i~n~-~~~~~~~~l~~~i~~ 178 (180)
T 1kgd_A 119 FVVFIAAPTITPGLNE------------DESLQRLQKESDILQRTY----AHYFDLTIINN-EIDETIRHLEEAVEL 178 (180)
T ss_dssp EEEEEECCSCCTTSCC------------SHHHHHHHHHHHHHHHHH----GGGCSEEEECS-SHHHHHHHHHHHHHH
T ss_pred EEEEEECCCHHHHHhh------------HHHHHHHHHHHHHHHHhh----hCCCcEEEECc-CHHHHHHHHHHHHHH
Confidence 6799999988888876 345577777666654443 36899999875 455666666666653
No 109
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=92.28 E-value=0.084 Score=46.30 Aligned_cols=73 Identities=15% Similarity=0.106 Sum_probs=38.0
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhh
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (301)
.|+.||+|+|.++.+.|. .||..|+ .-..|.+.++-.|..+.+-. ....++|+++.+-... +.|.+.|.+.
T Consensus 146 PDl~I~Ldv~~e~~~~Ri-~rdr~E~------~~~e~~~rv~~~y~~la~~~-~~~~~vIDa~~sieeV-~~I~~~l~~~ 216 (223)
T 3ld9_A 146 PDITFIIDVDINESLSRS-CKNGYEF------ADMEFYYRVRDGFYDIAKKN-PHRCHVITDKSETYDI-DDINFVHLEV 216 (223)
T ss_dssp CSEEEEEECC-----------------------CHHHHHHHHHHHHHHHHHC-TTTEEEEESSCSSSCC-CHHHHHHHHH
T ss_pred CCeEEEEeCCHHHHHHHh-ccCcccc------chHHHHHHHHHHHHHHHHHC-CCCEEEEcCCCCHHHH-HHHHHHHHHH
Confidence 389999999999999987 5554332 12345555666776665432 2367899987665544 7777777665
Q ss_pred cc
Q 022183 81 LG 82 (301)
Q Consensus 81 l~ 82 (301)
+.
T Consensus 217 lg 218 (223)
T 3ld9_A 217 IK 218 (223)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 110
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=92.21 E-value=0.085 Score=46.60 Aligned_cols=77 Identities=13% Similarity=0.226 Sum_probs=43.7
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhh
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (301)
.|+.||+|+|.++.+.|...|.-.+| .|.--..|.+.++..|..+.+-.. . .++|+++..-....+.|.+.|.+.
T Consensus 155 PDlvi~Ldv~~e~~~~Ri~~R~~~dr---~E~~~~~~~~rv~~~y~~la~~~~-~-~~vIDa~~sieeV~~~I~~~l~~~ 229 (236)
T 3lv8_A 155 PDLTLYLDIDPKLGLERARGRGELDR---IEKMDISFFERARERYLELANSDD-S-VVMIDAAQSIEQVTADIRRALQDW 229 (236)
T ss_dssp CSEEEEEECCHHHHHHC-----CCCT---TTTSCHHHHHHHHHHHHHHHHHCT-T-EEEEETTSCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHhcCCcch---hhhhHHHHHHHHHHHHHHHHHHCC-C-EEEEeCCCCHHHHHHHHHHHHHHH
Confidence 38999999999999999877742222 111112455556667776654222 2 788887554444445566666655
Q ss_pred cc
Q 022183 81 LG 82 (301)
Q Consensus 81 l~ 82 (301)
+.
T Consensus 230 l~ 231 (236)
T 3lv8_A 230 LS 231 (236)
T ss_dssp HT
T ss_pred HH
Confidence 54
No 111
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=92.08 E-value=0.11 Score=42.82 Aligned_cols=69 Identities=22% Similarity=0.365 Sum_probs=37.2
Q ss_pred eEEEEeCCchhHHHHHh--hhccccCCCC----HHHHHHHHHhhccchhHhhcccccccccEeecCCCCC-chhHHHHHH
Q 022183 3 MKIFVDTDADVRLARRI--RRDTVERGRD----VDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDN-HVAIDLIVQ 75 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rri--~RD~~erg~~----~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~-~~~~~~i~~ 75 (301)
+.||+++|.+++ .+|+ .++ ..|+-. ....+.+....+.|.|. ++||++|++++.+ ....+.|.+
T Consensus 100 ~vi~L~~~~e~l-~~Rl~~~~~-~~rp~~~~~~~~~~l~~~~~~r~~~y~-------~~ad~~Idt~~~~~~e~~~~I~~ 170 (185)
T 3trf_A 100 VVIYLTASIDTQ-LKRIGQKGE-MRRPLFIKNNSKEKLQQLNEIRKPLYQ-------AMADLVYPTDDLNPRQLATQILV 170 (185)
T ss_dssp EEEEEECCHHHH-HHHHHCCTT-CSSCCCCCHHHHHHHHHHHHHHHHHHH-------HHCSEEEECTTCCHHHHHHHHHH
T ss_pred cEEEEECCHHHH-HHHHhhcCC-CCCCCCCCCCHHHHHHHHHHHHHHHHh-------hcCCEEEECCCCCHHHHHHHHHH
Confidence 679999999985 4555 333 223321 12333333333555553 4599999986533 334455555
Q ss_pred HHhhh
Q 022183 76 HIHTK 80 (301)
Q Consensus 76 ~i~~~ 80 (301)
.+...
T Consensus 171 ~l~~~ 175 (185)
T 3trf_A 171 DIKQT 175 (185)
T ss_dssp HSCC-
T ss_pred HHHHH
Confidence 54443
No 112
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=92.03 E-value=0.13 Score=44.62 Aligned_cols=75 Identities=12% Similarity=0.219 Sum_probs=45.5
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhhc
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKL 81 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l 81 (301)
|+.||+|+|.++.+.|...|.-.+| .|.--..|++.++..|..+.+-. .--++|+.+..-....+.|.+.|.+.|
T Consensus 134 Dl~i~Ldv~~e~~~~Ri~~R~~~dr---~E~~~~~f~~rv~~~y~~la~~~--~~~~vIDa~~s~eeV~~~I~~~l~~~l 208 (213)
T 4tmk_A 134 DLTLYLDVTPEVGLKRARARGELDR---IEQESFDFFNRTRARYLELAAQD--KSIHTIDATQPLEAVMDAIRTTVTHWV 208 (213)
T ss_dssp SEEEEEECCHHHHHHHHHHHSSCCT---TTTSCHHHHHHHHHHHHHHHHTC--TTEEEEETTSCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHhcCCccc---hhhhHHHHHHHHHHHHHHHHHHC--CcEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 8999999999999999888842222 12112335556777787776421 335677764433333445555555444
No 113
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=91.93 E-value=0.19 Score=42.07 Aligned_cols=68 Identities=12% Similarity=0.078 Sum_probs=38.9
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhh
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (301)
.|+.||+++|.++++.|-..| .+| .+-+ +|.+.++..|..... ..++++|+++.. ++.+.+.|.+.
T Consensus 131 ~d~vi~l~~~~e~~~~Rl~~r--~~r-~~~~----~~~~~~~~~~~~~~~---~~~~~~Id~~~~----~~~~~~~i~~~ 196 (212)
T 2wwf_A 131 PDVVFYLNVPPNYAQNRSDYG--EEI-YEKV----ETQKKIYETYKHFAH---EDYWINIDATRK----IEDIHNDIVKE 196 (212)
T ss_dssp CSEEEEEECCTTGGGGSTTTT--SST-TCSH----HHHHHHHHHGGGGTT---CTTEEEEECSSC----HHHHHHHHHHH
T ss_pred CCEEEEEeCCHHHHHHhhccC--ccc-ccHH----HHHHHHHHHHHHHhc---cCCEEEEECCCC----HHHHHHHHHHH
Confidence 378999999999988764333 122 1212 334434445554433 678999987532 44444444444
Q ss_pred cc
Q 022183 81 LG 82 (301)
Q Consensus 81 l~ 82 (301)
+.
T Consensus 197 l~ 198 (212)
T 2wwf_A 197 VT 198 (212)
T ss_dssp HT
T ss_pred HH
Confidence 43
No 114
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=91.73 E-value=0.26 Score=40.34 Aligned_cols=71 Identities=17% Similarity=0.173 Sum_probs=38.3
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCC-CH--HHHHHHHHhhccchhHhhcccccccccEee-cCCCCCchhHHHHHHHH
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGR-DV--DSVLEQYAKFVKPAFDDFVLPSKKYADVII-PRGGDNHVAIDLIVQHI 77 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~-~~--~~v~~~~~~~~~p~~~~~i~P~~~~ADiii-~~~~~~~~~~~~i~~~i 77 (301)
|+.||+++|.++++.||+..+ .||+ +. ++.+..+. .++..|............++| ++.. .++.+.+.|
T Consensus 117 ~~vi~l~~~~~~~~~rr~~~~--~R~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~I~d~~~----~~e~v~~~I 189 (194)
T 1nks_A 117 SVIFLLEADPKIILSRQKRDT--TRNRNDYSDESVILETI-NFARYAATASAVLAGSTVKVIVNVEG----DPSIAANEI 189 (194)
T ss_dssp SEEEEEECCHHHHHHHHHHCT--TTCCCCCCSHHHHHHHH-HHHHHHHHHHHHHHTCEEEEEECCSS----CHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHhhc--ccCCCCccCHHHHHHHH-HHHHHHHHHHHHhcCCcEEEEeCCCC----CHHHHHHHH
Confidence 688999999999999987531 2454 21 22233222 244555555433222223677 5432 244555555
Q ss_pred hh
Q 022183 78 HT 79 (301)
Q Consensus 78 ~~ 79 (301)
.+
T Consensus 190 ~~ 191 (194)
T 1nks_A 190 IR 191 (194)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 115
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=91.43 E-value=0.28 Score=40.11 Aligned_cols=26 Identities=42% Similarity=0.606 Sum_probs=20.7
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCCC
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGRD 29 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~~ 29 (301)
|+.||+++|.++++.||+..+. ||++
T Consensus 116 ~~~i~l~~~~~~~~~rRl~~~~--R~r~ 141 (192)
T 1kht_A 116 DLIIVVETTGDEILMRRMSDET--RVRD 141 (192)
T ss_dssp SEEEEEECCHHHHHHHHHTSSS--CSSS
T ss_pred CEEEEEeCCHHHHHHHHhhhcc--cCCC
Confidence 7899999999999988887643 4443
No 116
>3hjn_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynth nucleotide-binding, transferase, structural genomics; HET: ADP TYD; 2.10A {Thermotoga maritima}
Probab=91.09 E-value=0.13 Score=43.91 Aligned_cols=70 Identities=11% Similarity=0.231 Sum_probs=39.5
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhh
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (301)
|+.+|+|.|.++.+.|+-.||-.|. . .|++.++-.|.+..+..... =++|+++.+-....+.|.+.|++.
T Consensus 123 Dl~i~Ld~~~e~~~~R~~~~dr~e~---~-----ef~~rv~~~y~~la~~~~~~-~~~IDa~~~~eeV~~~I~~~i~~r 192 (197)
T 3hjn_A 123 DLTFYIDVDVETALKRKGELNRFEK---R-----EFLERVREGYLVLAREHPER-IVVLDGKRSIEEIHRDVVREVKRR 192 (197)
T ss_dssp SEEEEEECCHHHHHHHC---CTTCC---H-----HHHHHHHHHHHHHHHHCTTT-EEEEETTSCHHHHHHHHHHHHSCC
T ss_pred CceeecCcChHHHHHhCcCcCcccc---H-----HHHHHHHHHHHHHHHhCCCC-EEEEcCCCCHHHHHHHHHHHHHHH
Confidence 8999999999999999877764432 1 45666777777665432221 145665433222233444444443
No 117
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=91.07 E-value=0.26 Score=41.96 Aligned_cols=21 Identities=19% Similarity=0.368 Sum_probs=18.5
Q ss_pred CeEEEEeCCchhHHHHHhhhc
Q 022183 2 NMKIFVDTDADVRLARRIRRD 22 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD 22 (301)
|+.||+|+|.++.+.|...|.
T Consensus 110 ~~vi~L~~~~~~~~~R~~~r~ 130 (222)
T 1zak_A 110 DTFILLDVPDELLVERVVGRR 130 (222)
T ss_dssp SEEEEEECCHHHHHHHHTTEE
T ss_pred CEEEEEECCHHHHHHHHHcCC
Confidence 789999999999999877664
No 118
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=90.96 E-value=0.2 Score=41.28 Aligned_cols=22 Identities=18% Similarity=0.462 Sum_probs=19.3
Q ss_pred CeEEEEeCCchhHHHHHhhhcc
Q 022183 2 NMKIFVDTDADVRLARRIRRDT 23 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~ 23 (301)
|+.||+++|.++++.|...|+.
T Consensus 114 ~~vi~l~~~~e~~~~R~~~R~~ 135 (196)
T 2c95_A 114 TLLLYVDAGPETMTQRLLKRGE 135 (196)
T ss_dssp SEEEEEECCHHHHHHHHHHHHT
T ss_pred CEEEEEECCHHHHHHHHHccCC
Confidence 7899999999999998877763
No 119
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=90.82 E-value=0.3 Score=40.98 Aligned_cols=66 Identities=12% Similarity=0.074 Sum_probs=40.9
Q ss_pred eEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhhcc
Q 022183 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKLG 82 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l~ 82 (301)
..||+++|.++++.|-..|+.. ..+.+.+..+| ..+..++...||++|+++. .++.+.+.|.+.+.
T Consensus 127 ~vv~l~~~~e~l~~Rl~~R~~~--~~~~~~l~~~~--------~~~~~~~~~~~~~~Id~~~----~~~e~~~~I~~~l~ 192 (200)
T 4eun_A 127 DFLHLDGPAEVIKGRMSKREGH--FMPASLLQSQL--------ATLEALEPDESGIVLDLRQ----PPEQLIERALTWLD 192 (200)
T ss_dssp EEEEEECCHHHHHHHHTTCSCC--SSCGGGHHHHH--------HHCCCCCTTSCEEEEETTS----CHHHHHHHHHHHHC
T ss_pred EEEEEeCCHHHHHHHHHhcccC--CCCHHHHHHHH--------HHhCCCCCCCCeEEEECCC----CHHHHHHHHHHHHH
Confidence 4689999999988887666542 22333333333 3344456667999999743 34455555555544
No 120
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana}
Probab=90.70 E-value=0.34 Score=43.01 Aligned_cols=73 Identities=11% Similarity=0.093 Sum_probs=39.3
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCC-----C-------HHHHHHHHHhhccchhHhhcccccccccEee---------
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGR-----D-------VDSVLEQYAKFVKPAFDDFVLPSKKYADVII--------- 60 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~-----~-------~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii--------- 60 (301)
+++||+++|.++++.|...|....|+- . .+.+...|. .+.|.|.+ ||++|
T Consensus 143 ~~vV~L~a~~e~l~~Rl~~~~~~~Rpl~~~~~~~d~~~~~~~~l~~l~~-eR~~lY~~--------ad~vi~~~~~~~~~ 213 (250)
T 3nwj_A 143 GISIWLDVPLEALAHRIAAVGTGSRPLLHDDESGDTYTAALNRLSTIWD-ARGEAYTK--------ASARVSLENITLKL 213 (250)
T ss_dssp SEEEEEECCHHHHHHHHHC----------------CHHHHHHHHHHHHH-HHHHHHTT--------SSEEEEHHHHHHHH
T ss_pred CcEEEEECCHHHHHHHHhhcCCCCCCcccCCCcccchhhHHHHHHHHHH-HHHHHHhh--------CCEEEEeccccccc
Confidence 579999999999887766533223321 1 233333333 36665543 99999
Q ss_pred ---cCCCCC-chhHHHHHHHHhhhccc
Q 022183 61 ---PRGGDN-HVAIDLIVQHIHTKLGQ 83 (301)
Q Consensus 61 ---~~~~~~-~~~~~~i~~~i~~~l~~ 83 (301)
+.+... ....+.|++.+...+..
T Consensus 214 ~~iDTs~~s~eev~~~I~~~i~~~~~~ 240 (250)
T 3nwj_A 214 GYRSVSDLTPAEIAIEAFEQVQSYLEK 240 (250)
T ss_dssp TCSSGGGCCHHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCCCHHHHHHHHHHHHHHHhhc
Confidence 433322 23455666666665543
No 121
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=90.56 E-value=0.64 Score=37.69 Aligned_cols=65 Identities=15% Similarity=0.166 Sum_probs=38.0
Q ss_pred eEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhccc-ccccccEeecCCCCCchhHHHHHHHHhhhc
Q 022183 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLP-SKKYADVIIPRGGDNHVAIDLIVQHIHTKL 81 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P-~~~~ADiii~~~~~~~~~~~~i~~~i~~~l 81 (301)
..||+++|.++++.|-..|+-... + ..++... +..|-.| ..+.||++|+++. .++.+.+.|.+.+
T Consensus 106 ~vv~l~~~~e~~~~R~~~R~~~~~--~-~~~~~~~-------~~~~~~~~~~~~~~~~Id~~~----~~~~~~~~i~~~l 171 (175)
T 1knq_A 106 SFIYLKGDFDVIESRLKARKGHFF--K-TQMLVTQ-------FETLQEPGADETDVLVVDIDQ----PLEGVVASTIEVI 171 (175)
T ss_dssp EEEEEECCHHHHHHHHHTSTTCCC--C-HHHHHHH-------HHHCCCCCTTCTTEEEEECSS----CHHHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHhccCCCC--c-hHHHHHH-------HHhhhCcccCCCCeEEEeCCC----CHHHHHHHHHHHH
Confidence 689999999999988777752211 2 3333321 2223234 4567999999753 2444444444443
No 122
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=90.53 E-value=0.41 Score=40.04 Aligned_cols=72 Identities=8% Similarity=0.071 Sum_probs=37.9
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhhc
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKL 81 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l 81 (301)
|+.||+++|.++++.|- .|+ .+| .+. .+|.+.++..|..+.... ....++|+++.+-....+.|.+.+...+
T Consensus 131 d~vi~l~~~~e~~~~Rl-~r~-~~~-~~~----~~~~~~~~~~~~~~~~~~-~~~~~~Id~~~~~e~~~~~i~~~l~~~l 202 (215)
T 1nn5_A 131 DLVLFLQLQLADAAKRG-AFG-HER-YEN----GAFQERALRCFHQLMKDT-TLNWKMVDASKSIEAVHEDIRVLSEDAI 202 (215)
T ss_dssp SEEEEEECCHHHHHHC-------CT-TCS----HHHHHHHHHHHHHHTTCT-TSCEEEEETTSCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHh-ccC-ccc-cch----HHHHHHHHHHHHHHHHhC-CCCEEEEECCCCHHHHHHHHHHHHHHHH
Confidence 78999999999988774 343 122 111 234444555666665433 2344788764332333445555554443
No 123
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=90.45 E-value=0.59 Score=41.11 Aligned_cols=68 Identities=22% Similarity=0.303 Sum_probs=41.5
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhccccc----ccccEeecCCCCCchhHHHHHHHH
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSK----KYADVIIPRGGDNHVAIDLIVQHI 77 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~----~~ADiii~~~~~~~~~~~~i~~~i 77 (301)
++.||+++|.++++.|-..|. +..+. +.+.+ .+..|.+|.. ..++++|+.+... .++.+.+.|
T Consensus 101 ~~vi~l~~~~e~~~~R~~~R~---~~~~~-~~l~~-------~~~~~e~~~~~~~~~~~~~~Id~~~~~--~~~ei~~~I 167 (260)
T 3a4m_A 101 YAIIYLKASLDVLIRRNIERG---EKIPN-EVIKK-------MYEKFDEPGKKYKWDEPFLIIDTTKDI--DFNEIAKKL 167 (260)
T ss_dssp EEEEEEECCHHHHHHHHHHTT---CSSCH-HHHHH-------HHHHCCCTTSSCGGGCCSEEEETTSCC--CHHHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHHhCC---CCCCH-HHHHH-------HHHHhcCccccCCCCCCEEEEeCCCCC--CHHHHHHHH
Confidence 578999999999998876653 22232 22222 2445666654 3489999876522 245555555
Q ss_pred hhhcc
Q 022183 78 HTKLG 82 (301)
Q Consensus 78 ~~~l~ 82 (301)
.+.+.
T Consensus 168 ~~~l~ 172 (260)
T 3a4m_A 168 IEKSK 172 (260)
T ss_dssp HHHHT
T ss_pred Hhccc
Confidence 55443
No 124
>4hlc_A DTMP kinase, thymidylate kinase; TMK, MRSA, pipiridine, transfera transferase inhibitor complex; HET: T05; 1.55A {Staphylococcus aureus subsp} PDB: 2cck_A 4gfd_A* 4gsy_A* 4hdc_A* 4hej_A* 2ccj_A* 4hld_A* 2ccg_A*
Probab=90.29 E-value=0.5 Score=40.45 Aligned_cols=78 Identities=14% Similarity=0.187 Sum_probs=42.4
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhhc
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKL 81 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l 81 (301)
|+.||+|+|.++.+.|...|.-.+ .| .|.--..|++.++-.|.++.+-.... =++|+.+.+-....+.|.+.|.+.|
T Consensus 126 Dl~i~Ld~~~e~~~~Ri~~r~~~~-dr-~e~~~~~f~~~v~~~Y~~l~~~~~~~-~~~IDa~~~~e~V~~~i~~~i~~~L 202 (205)
T 4hlc_A 126 DLTIYLNVSAEVGRERIIKNSRDQ-NR-LDQEDLKFHEKVIEGYQEIIHNESQR-FKSVNADQPLENVVEDTYQTIIKYL 202 (205)
T ss_dssp SEEEEEECCHHHHHHHHHC---------CCHHHHHHHHHHHHHHHHHHHSCCTT-EEEEETTSCHHHHHHHHHHHHHHHH
T ss_pred CEEeeeCCCHHHHHHHHHhcCCcc-cc-hhccCHHHHHHHHHHHHHHHHhCCCC-EEEEECCCCHHHHHHHHHHHHHHHH
Confidence 899999999999998876653211 11 12222345666877887775432211 1456654333333345555555554
Q ss_pred c
Q 022183 82 G 82 (301)
Q Consensus 82 ~ 82 (301)
+
T Consensus 203 ~ 203 (205)
T 4hlc_A 203 E 203 (205)
T ss_dssp C
T ss_pred h
Confidence 3
No 125
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=90.02 E-value=0.49 Score=41.08 Aligned_cols=77 Identities=14% Similarity=0.158 Sum_probs=45.2
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhhc
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKL 81 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l 81 (301)
|+.||+++|.++.+.|...|... .++- +.--..|.+.++..|....... ...-++|+++..-....+.|.+.|.+.+
T Consensus 150 d~vi~L~~~~e~~~~R~~~R~~~-~dr~-e~~~~~~~~rv~~~y~~l~~~~-~~~~~vIDa~~s~eev~~~I~~~l~~~l 226 (229)
T 4eaq_A 150 DLTIYLNVSAEVGRERIIKNSRD-QNRL-DQEDLKFHEKVIEGYQEIIHNE-SQRFKSVNADQPLENVVEDTYQTIIKYL 226 (229)
T ss_dssp SEEEEEECCHHHHHHHHHHC------CC-CHHHHHHHHHHHHHHHHHTTTC-TTTEEEEETTSCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHhcCCC-ccch-hhhhHHHHHHHHHHHHHHHHhC-CCCEEEEeCCCCHHHHHHHHHHHHHHHh
Confidence 78999999999998887776321 1221 1123345555666777665432 2345778875544444556666665554
No 126
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=89.98 E-value=0.37 Score=38.90 Aligned_cols=71 Identities=8% Similarity=0.022 Sum_probs=37.0
Q ss_pred CeEEEEeCCchhHHHHHh--hhccccCCCC-HHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHh
Q 022183 2 NMKIFVDTDADVRLARRI--RRDTVERGRD-VDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIH 78 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri--~RD~~erg~~-~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~ 78 (301)
|+.||+++|.++++.|-. .|. ..|... .++..+.+.+ .|.......+. ||++|+++.. .++.+.+.|.
T Consensus 95 ~~~i~l~~~~e~~~~R~~~~~r~-~~r~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~Id~~~~---~~~~~~~~i~ 165 (173)
T 1e6c_A 95 GTVVYLFAPAEELALRLQASLQA-HQRPTLTGRPIAEEMEA----VLREREALYQD-VAHYVVDATQ---PPAAIVCELM 165 (173)
T ss_dssp SEEEEEECCHHHHHHHHHHHHCS-CCCCCTTHHHHHHHHHH----HHHHHHHHHHH-HCSEEEETTS---CHHHHHHHHH
T ss_pred CeEEEEECCHHHHHHHHhhccCC-CCCCcCCCCCHHHHHHH----HHHHHHHHHHh-CcEEEECCCC---CHHHHHHHHH
Confidence 689999999999997776 552 122211 1222222111 22222111233 8999987532 2344555555
Q ss_pred hhc
Q 022183 79 TKL 81 (301)
Q Consensus 79 ~~l 81 (301)
+.+
T Consensus 166 ~~l 168 (173)
T 1e6c_A 166 QTM 168 (173)
T ss_dssp HHT
T ss_pred HHh
Confidence 444
No 127
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=89.96 E-value=0.54 Score=38.39 Aligned_cols=72 Identities=14% Similarity=0.260 Sum_probs=39.4
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHH-HhhccchhHhhcccccccccEeecCCCCCchh----HHHHHHH
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQY-AKFVKPAFDDFVLPSKKYADVIIPRGGDNHVA----IDLIVQH 76 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~-~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~----~~~i~~~ 76 (301)
|+.||+++|.++++.|-..| |++-....+.. ....+-.|......+. +|++|+..+.+... ++.++++
T Consensus 98 ~~vi~L~~~~e~l~~R~~~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~y~--~~~~i~~~~~~~~ev~~~v~~i~~~ 170 (180)
T 3iij_A 98 HIVFVLRTDTNVLYERLETR-----GYNEKKLTDNIQCEIFQVLYEEATASYK--EEIVHQLPSNKPEELENNVDQILKW 170 (180)
T ss_dssp SEEEEEECCHHHHHHHHHHT-----TCCHHHHHHHHHHHHTTHHHHHHHHHSC--GGGEEEEECSSHHHHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEcCCCCHHHHHHHHHHHHHH
Confidence 68999999999999887666 33333222211 1222333333322222 58888876655433 3455555
Q ss_pred Hhhh
Q 022183 77 IHTK 80 (301)
Q Consensus 77 i~~~ 80 (301)
|++.
T Consensus 171 l~~~ 174 (180)
T 3iij_A 171 IEQW 174 (180)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 128
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=89.51 E-value=0.37 Score=40.02 Aligned_cols=66 Identities=18% Similarity=0.277 Sum_probs=34.8
Q ss_pred eEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHh
Q 022183 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIH 78 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~ 78 (301)
..||+.+++...+.+|+. +||++-++.+.+......+..+. .+.||+||.+. +...+.+.+.+.|+
T Consensus 120 ~~v~~~~~~~e~l~~Rl~----~R~~~~~~~i~~rl~~~~~~~~~-----~~~~d~vi~n~-~~~~~~~~l~~~i~ 185 (205)
T 3tr0_A 120 LSIFILPPSIEALRERLI----KRRQDDTAIIEQRLALAREEMAH-----YKEFDYLVVND-NFDQAVQNLIHIIS 185 (205)
T ss_dssp EEEEEECSCHHHHHHHHH----TCTTSCSSTHHHHHHHHHHHHTT-----GGGCSEEEECS-SHHHHHHHHHHHHH
T ss_pred EEEEEECcCHHHHHHHHH----HhCCCCHHHHHHHHHHHHHHHhc-----ccCCCEEEECC-CHHHHHHHHHHHHH
Confidence 468998876555555654 34433333333334434443322 26899999864 33333444444443
No 129
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=89.45 E-value=0.19 Score=40.77 Aligned_cols=68 Identities=16% Similarity=0.275 Sum_probs=34.9
Q ss_pred CeEEEEeCCchhHHHHHhhhcccc--CCCC--HHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHH
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVE--RGRD--VDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHI 77 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~e--rg~~--~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i 77 (301)
++.+|++++.+++..|...|.... ++.+ .+.+..+|.. +.|.| ++.||++|+++..+ ++.+.+.|
T Consensus 98 ~~~i~l~~~~~~l~~R~~~r~~r~~~~~~~~~~~~~~~~~~~-r~~~~-------~~~a~~~id~~~~~---~~~~~~~i 166 (173)
T 1kag_A 98 GVVVYLETTIEKQLARTQRDKKRPLLHVETPPREVLEALANE-RNPLY-------EEIADVTIRTDDQS---AKVVANQI 166 (173)
T ss_dssp SEEEECCCCHHHHHSCC------CCSSSSCCCHHHHHHHHHH-HHHHH-------HHHCSEEC-----C---HHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHHHH-HHHHH-------HhhCCEEEECCCCC---HHHHHHHH
Confidence 678999999999888777663211 2222 4555555543 44544 35689999875332 33444444
Q ss_pred hhh
Q 022183 78 HTK 80 (301)
Q Consensus 78 ~~~ 80 (301)
...
T Consensus 167 ~~~ 169 (173)
T 1kag_A 167 IHM 169 (173)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 130
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=88.82 E-value=0.08 Score=44.80 Aligned_cols=33 Identities=18% Similarity=0.168 Sum_probs=26.4
Q ss_pred HHHHHHHHhhccchhHhhcccc--cccccEeecCC
Q 022183 31 DSVLEQYAKFVKPAFDDFVLPS--KKYADVIIPRG 63 (301)
Q Consensus 31 ~~v~~~~~~~~~p~~~~~i~P~--~~~ADiii~~~ 63 (301)
+++.++|.+...|+++.|++|. +++||+||+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~y~~~~~~~~~AD~vI~N~ 200 (201)
T 1rz3_A 166 KQNIQKFINRYWKAEDYYLETEEPIKRADVVFDMT 200 (201)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHCHHHHCSEEEC--
T ss_pred HHHHHHHHhheeHHHHHHhCCCCcHhhCcEEecCC
Confidence 7888888777899999999888 78999999874
No 131
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=88.80 E-value=0.27 Score=43.11 Aligned_cols=59 Identities=12% Similarity=0.125 Sum_probs=37.9
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCC
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGG 64 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~ 64 (301)
|+.||+|+|.++.+.|...|.-. ...|.--..|.+.++..|..+.+-. ...-++|+.+.
T Consensus 153 Dl~I~Ldv~~e~~~~Ri~~R~~~---dr~E~~~~ef~~rv~~~Y~~la~~~-~~~~~vIDa~~ 211 (227)
T 3v9p_A 153 DLTVLFDVPPQIASARRGAVRMP---DKFESESDAFFARTRAEYLRRAQEA-PHRFVIVDSSE 211 (227)
T ss_dssp SEEEEEECCSSCGGGTTTCCCCC------CCHHHHHHHHHHHHHHHHHHHC-TTTEEEEETTS
T ss_pred CEEEEEeCCHHHHHHHHHhccCc---cchhhhhHHHHHHHHHHHHHHHHHh-cCCEEEEeCCC
Confidence 89999999999999998777421 1222222456666888888776422 12357788643
No 132
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=88.66 E-value=0.72 Score=38.85 Aligned_cols=21 Identities=29% Similarity=0.419 Sum_probs=19.1
Q ss_pred CCeEEEEeCCchhHHHHHhhh
Q 022183 1 MNMKIFVDTDADVRLARRIRR 21 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~R 21 (301)
+|+.||+++|.++++.|-..|
T Consensus 107 ~d~vi~l~~~~e~~~~Rl~~R 127 (216)
T 3dl0_A 107 IDYVINIQVDKDVLMERLTGR 127 (216)
T ss_dssp CSEEEEEECCGGGHHHHHHTE
T ss_pred CCEEEEEECCHHHHHHHHHCC
Confidence 378999999999999999888
No 133
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=88.64 E-value=0.25 Score=42.63 Aligned_cols=76 Identities=12% Similarity=0.150 Sum_probs=43.7
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhhc
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKL 81 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l 81 (301)
|+.||+|+|.++.+.|...|.-.+| .|.--..|++.++..|..+.+-. ...-++|+.+..-....+.|.+.|.+.+
T Consensus 133 Dlvi~Ld~~~e~~~~Ri~~R~~~dr---~E~~~~~~~~rv~~~y~~l~~~~-~~~~~vIDa~~s~eeV~~~I~~~l~~~l 208 (213)
T 4edh_A 133 DLTLVFDLPVEIGLARAAARGRLDR---FEQEDRRFFEAVRQTYLQRAAQA-PERYQVLDAGLPLAEVQAGLDRLLPNLL 208 (213)
T ss_dssp SEEEEEECCHHHHHHHHCCCSSCCT---TTTSCHHHHHHHHHHHHHHHHHC-TTTEEEEETTSCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHhcCCcCc---ccccHHHHHHHHHHHHHHHHHHC-CCcEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 8999999999999999877732111 11101234444666666654322 1346788875443333445555555443
No 134
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=86.90 E-value=1.2 Score=36.64 Aligned_cols=21 Identities=24% Similarity=0.471 Sum_probs=17.3
Q ss_pred CCeEEEEeCCchhHHHHHhhh
Q 022183 1 MNMKIFVDTDADVRLARRIRR 21 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~R 21 (301)
.|..||+++|.++++.|-..|
T Consensus 101 ~~~vi~l~~~~e~~~~Rl~~R 121 (184)
T 1y63_A 101 FHMVVVLHTSTEVLFERLTKR 121 (184)
T ss_dssp CSEEEEEECCHHHHHHHHHHT
T ss_pred CCEEEEEECCHHHHHHHHHhC
Confidence 367899999999998876665
No 135
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=86.82 E-value=0.62 Score=39.79 Aligned_cols=22 Identities=18% Similarity=0.101 Sum_probs=19.0
Q ss_pred CCeEEEEeCCchhHHHHHhhhc
Q 022183 1 MNMKIFVDTDADVRLARRIRRD 22 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD 22 (301)
.|+.||+|+|.++++.|...|.
T Consensus 108 ~~~vi~L~~~~~~~~~R~~~R~ 129 (227)
T 1zd8_A 108 IDTVINLNVPFEVIKQRLTARW 129 (227)
T ss_dssp CCEEEEEECCHHHHHHHHTCEE
T ss_pred CCEEEEEECCHHHHHHHHHcCc
Confidence 3789999999999999887774
No 136
>3tmk_A Thymidylate kinase; phosphotransferase; HET: T5A; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 2tmk_A* 1tmk_A*
Probab=85.77 E-value=0.5 Score=41.00 Aligned_cols=74 Identities=15% Similarity=0.177 Sum_probs=45.4
Q ss_pred CeEEEE-eCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhccc---ccccccEeec-CCCCCchhHHHHHHH
Q 022183 2 NMKIFV-DTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLP---SKKYADVIIP-RGGDNHVAIDLIVQH 76 (301)
Q Consensus 2 d~~ifv-d~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P---~~~~ADiii~-~~~~~~~~~~~i~~~ 76 (301)
|+.||+ |.|.++.+.|.-. |+...|. ..|++.++-.|.++.+- ....--++|+ .+.+-....+.|.+.
T Consensus 127 Dlti~L~dv~pe~~~~R~~~-----~~dr~E~--~~f~~rvr~~Y~~la~~~~~~~~~~~~vID~a~~s~eeV~~~I~~~ 199 (216)
T 3tmk_A 127 DLTLFLSTQDVDNNAEKSGF-----GDERYET--VKFQEKVKQTFMKLLDKEIRKGDESITIVDVTNKGIQEVEALIWQI 199 (216)
T ss_dssp SEEEEEECSCCSCGGGCCSS-----SCCTTCC--HHHHHHHHHHHHHHHHHHHHTTCCSEEEEECTTCCHHHHHHHHHHH
T ss_pred CEEEEEeCCCHHHHHHHhcc-----CcccccH--HHHHHHHHHHHHHHHHhccccCCCCEEEEeCCCCCHHHHHHHHHHH
Confidence 899999 9999998877422 2222333 46777799999988753 1122346787 433333334455555
Q ss_pred Hhhhcc
Q 022183 77 IHTKLG 82 (301)
Q Consensus 77 i~~~l~ 82 (301)
|.+.+.
T Consensus 200 i~~~l~ 205 (216)
T 3tmk_A 200 VEPVLS 205 (216)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 555543
No 137
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=85.51 E-value=0.75 Score=37.52 Aligned_cols=72 Identities=17% Similarity=0.202 Sum_probs=40.4
Q ss_pred CeEEEEeCCchhHHHHHhhhccc-cCC-CCHHHHH---HHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHH
Q 022183 2 NMKIFVDTDADVRLARRIRRDTV-ERG-RDVDSVL---EQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQH 76 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~-erg-~~~~~v~---~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~ 76 (301)
|+.||+++|.++++.|-..|+.. .|. .+.+.+. +.|.....|.++.|-+ ...+++|+++. .++.+.+.
T Consensus 107 ~~vi~l~~~~e~~~~R~~~R~~~~~r~~~~~~~~~~r~~~~~~~~~~l~~~~~~---~~~~~~id~~~----~~~~v~~~ 179 (186)
T 3cm0_A 107 LGVVLVEVPEEELVRRILRRAELEGRSDDNEETVRRRLEVYREKTEPLVGYYEA---RGVLKRVDGLG----TPDEVYAR 179 (186)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHH---TTCEEEEECCS----CHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHh---cCcEEEEECCC----CHHHHHHH
Confidence 67899999999998887777521 122 2344443 3444444454544411 11267887632 24455555
Q ss_pred Hhhh
Q 022183 77 IHTK 80 (301)
Q Consensus 77 i~~~ 80 (301)
|.+.
T Consensus 180 i~~~ 183 (186)
T 3cm0_A 180 IRAA 183 (186)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 138
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=85.22 E-value=0.8 Score=38.49 Aligned_cols=21 Identities=10% Similarity=0.248 Sum_probs=18.9
Q ss_pred CCeEEEEeCCchhHHHHHhhh
Q 022183 1 MNMKIFVDTDADVRLARRIRR 21 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~R 21 (301)
+|+.||+++|.++++.|-..|
T Consensus 107 ~d~vi~l~~~~e~~~~Rl~~R 127 (216)
T 3fb4_A 107 LDYVLNIKVEQEELMKRLTGR 127 (216)
T ss_dssp CSEEEEEECCHHHHHHHHHSE
T ss_pred CCEEEEEECCHHHHHHHHHcC
Confidence 378999999999999998888
No 139
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=82.65 E-value=1.2 Score=36.83 Aligned_cols=71 Identities=13% Similarity=0.160 Sum_probs=37.7
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhh
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (301)
.|+.||+++|.++++. .|+- ++ .+. .+|.+.++..|..+..-. ....++|+++..-....+.|.+.+...
T Consensus 122 ~d~vi~l~~~~e~~~~---~R~~-d~---~e~--~~~~~rl~~~y~~~~~~~-~~~~~~Id~~~~~~~v~~~i~~~l~~~ 191 (204)
T 2v54_A 122 PDLVIFLESGSKEINR---NVGE-EI---YED--VTFQQKVLQEYKKMIEEG-DIHWQIISSEFEEDVKKELIKNIVIEA 191 (204)
T ss_dssp CSEEEEECCCHHHHTT---CCSS-ST---TCC--SHHHHHHHHHHHHHHTTC-SSCEEEECTTSCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCHHHHHh---hcCc-cc---ccH--HHHHHHHHHHHHHHHHhC-CCcEEEEECCCCHHHHHHHHHHHHHHH
Confidence 3789999999998876 3421 11 110 134444555666554321 234578876433333344555555444
Q ss_pred c
Q 022183 81 L 81 (301)
Q Consensus 81 l 81 (301)
+
T Consensus 192 l 192 (204)
T 2v54_A 192 I 192 (204)
T ss_dssp H
T ss_pred H
Confidence 3
No 140
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=81.96 E-value=0.24 Score=41.57 Aligned_cols=73 Identities=10% Similarity=0.139 Sum_probs=43.1
Q ss_pred CCeEEEEeCCchhHHHHHhhhccccCCC--C-HHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHH
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTVERGR--D-VDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHI 77 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~erg~--~-~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i 77 (301)
.|+.||+++|.++++.|-..|+...+|+ + .+. -.+|.+.+++.|..+.+.......++|++. -.++.+.+.|
T Consensus 133 ~d~~i~l~~~~~~~~~R~~~R~~~~~~~~~d~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~vId~~----~~~~~v~~~i 207 (214)
T 1gtv_A 133 PDWQVLLAVSAELAGERSRGRAQRDPGRARDNYER-DAELQQRTGAVYAELAAQGWGGRWLVVGAD----VDPGRLAATL 207 (214)
T ss_dssp CEEEEEEEEEHHHHHHHHHHHHHEBBEEEEEEEEE-EHHHHHHHHHHHHHHHHEEEEEEEEEEEEE----EBHHHHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHcccccccccccccccc-cHHHHHHHHHHHHHHHHhCCCCCEEEEeCC----CCHHHHHHHh
Confidence 3678999999999999998887542222 1 111 135555566677666432211223677763 2355555555
Q ss_pred h
Q 022183 78 H 78 (301)
Q Consensus 78 ~ 78 (301)
.
T Consensus 208 ~ 208 (214)
T 1gtv_A 208 A 208 (214)
T ss_dssp C
T ss_pred c
Confidence 4
No 141
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A*
Probab=81.29 E-value=3 Score=35.60 Aligned_cols=21 Identities=14% Similarity=0.033 Sum_probs=18.5
Q ss_pred CeEEEEeCCchhHHHHHhhhc
Q 022183 2 NMKIFVDTDADVRLARRIRRD 22 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD 22 (301)
|+.||+++|.++.+.|-..|.
T Consensus 124 d~vi~L~~~~e~~~~Rl~~R~ 144 (233)
T 1ak2_A 124 DSVIEFSIPDSLLIRRITGRL 144 (233)
T ss_dssp CEEEEEECCHHHHHHHHHTCE
T ss_pred CEEEEEECCHHHHHHHHHcCC
Confidence 789999999999998887774
No 142
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=79.56 E-value=3.9 Score=32.94 Aligned_cols=18 Identities=22% Similarity=0.145 Sum_probs=15.3
Q ss_pred EEEeCCchhHHHHHhhhc
Q 022183 5 IFVDTDADVRLARRIRRD 22 (301)
Q Consensus 5 ifvd~~~d~rl~Rri~RD 22 (301)
||+++|.++++.|-..|.
T Consensus 109 i~l~~~~e~~~~R~~~R~ 126 (183)
T 2vli_A 109 FTLIAPLNVVLERLRRDG 126 (183)
T ss_dssp EEEECCHHHHHHHHHTC-
T ss_pred EEEeCCHHHHHHHHHhcc
Confidence 999999999998877774
No 143
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A*
Probab=78.18 E-value=3 Score=34.99 Aligned_cols=23 Identities=13% Similarity=0.248 Sum_probs=19.9
Q ss_pred CCeEEEEeCCchhHHHHHhhhcc
Q 022183 1 MNMKIFVDTDADVRLARRIRRDT 23 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~ 23 (301)
.|+.||+++|.++++.|...|..
T Consensus 103 ~d~vi~l~~~~e~~~~R~~~R~~ 125 (214)
T 1e4v_A 103 VDYVLEFDVPDELIVDRIVGRRV 125 (214)
T ss_dssp CSEEEEEECCHHHHHHHHHTEEE
T ss_pred CCEEEEEECCHHHHHHHHHCCcc
Confidence 37899999999999999887764
No 144
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=77.63 E-value=1.8 Score=36.81 Aligned_cols=52 Identities=23% Similarity=0.195 Sum_probs=25.5
Q ss_pred eEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCC
Q 022183 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRG 63 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~ 63 (301)
..||+.+++...+.+|+. .||..-++.+.+..+...|..+ ....||+||.+.
T Consensus 142 ~~v~v~~~~~~~l~~Rl~----~R~~~~~~~i~~rl~~~~~~~~-----~~~~~d~vI~n~ 193 (231)
T 3lnc_A 142 VSIFIMPPSMEELRRRLC----GRRADDSEVVEARLKGAAFEIS-----HCEAYDYVIVNE 193 (231)
T ss_dssp EEEEEECSCHHHHHHC------------------CHHHHHHHHT-----TGGGSSEEEECS
T ss_pred EEEEEECCcHHHHHHHHH----HcCCCCHHHHHHHHHHHHHHHh-----hhcCCeEEEECc
Confidence 468888877777766653 3444334444444444555433 357899999874
No 145
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=77.40 E-value=1.5 Score=36.97 Aligned_cols=72 Identities=15% Similarity=0.146 Sum_probs=36.2
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhhc
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKL 81 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l 81 (301)
|+.||+|+|.++++.|. .|+..+ ...+.|..........|-.| ..+|++|+++.. .++.+.+.|.+.+
T Consensus 133 ~~vi~Ld~~~e~~~~R~-~r~~~~------~~r~~~~~~~~~~~~~y~~~--~~~~~~IDt~~~---s~eev~~~I~~~l 200 (211)
T 1m7g_A 133 FVEVYVDVPVEVAEQRD-PKGLYK------KAREGVIKEFTGISAPYEAP--ANPEVHVKNYEL---PVQDAVKQIIDYL 200 (211)
T ss_dssp EEEEEEECCHHHHHTSC-TTCHHH------HHHHTSSSSCBTTTBCCCCC--SSCSEEEECSSS---CHHHHHHHHHHHH
T ss_pred eEEEEEeCCHHHHHHhh-hHHHHH------HHHhcchhhhhhhhhhccCC--CCCeEEEECCCC---CHHHHHHHHHHHH
Confidence 67899999999998773 222111 11122221111111123222 467899987542 2444555555544
Q ss_pred cccc
Q 022183 82 GQHD 85 (301)
Q Consensus 82 ~~~~ 85 (301)
...+
T Consensus 201 ~~~~ 204 (211)
T 1m7g_A 201 DTKG 204 (211)
T ss_dssp HHTT
T ss_pred HHcC
Confidence 4433
No 146
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=75.82 E-value=2.9 Score=33.86 Aligned_cols=18 Identities=28% Similarity=0.422 Sum_probs=15.2
Q ss_pred CeEEEEeCCchhHHHHHh
Q 022183 2 NMKIFVDTDADVRLARRI 19 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri 19 (301)
|+.||+++|.++++.|-.
T Consensus 106 ~~~i~l~~~~e~~~~R~~ 123 (179)
T 2pez_A 106 FFEVFVDAPLHVCEQRDV 123 (179)
T ss_dssp EEEEEEECCHHHHHHHCT
T ss_pred eEEEEEeCCHHHHHHHHh
Confidence 578999999999988843
No 147
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A*
Probab=74.56 E-value=6.1 Score=33.13 Aligned_cols=22 Identities=23% Similarity=0.253 Sum_probs=19.1
Q ss_pred CCeEEEEeCCchhHHHHHhhhc
Q 022183 1 MNMKIFVDTDADVRLARRIRRD 22 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD 22 (301)
+|+.||+++|.++.+.|-..|.
T Consensus 112 ~d~vi~L~~~~e~~~~R~~~r~ 133 (220)
T 1aky_A 112 LEKAIELKVDDELLVARITGRL 133 (220)
T ss_dssp CCEEEEEECCHHHHHHHHHTEE
T ss_pred CCEEEEEECCHHHHHHHHhCCC
Confidence 3789999999999999887775
No 148
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=72.75 E-value=6.1 Score=32.12 Aligned_cols=68 Identities=9% Similarity=0.315 Sum_probs=34.9
Q ss_pred CeEEEEeCCchhHHHHHhhhccccC--CCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCC-chhHHHHHHHHh
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVER--GRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDN-HVAIDLIVQHIH 78 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~er--g~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~-~~~~~~i~~~i~ 78 (301)
++.||+++|.++++.|- .++...+ ...+ ..+.. ++ ..|-.| ..+|++|+..+.. ....+.|.+.+.
T Consensus 114 ~~~v~L~~~~e~~~~R~-~~~~~~~~~~~~~----~~~~~-~~---~~y~~~--~~~~~~Id~~~~~~~ev~~~I~~~l~ 182 (186)
T 2yvu_A 114 FLEIYVKASLEEVIRRD-PKGLYKKALKGEL----ENFTG-IT---DPYEPP--ENPQLVLDTESNTIEHNVSYLYSLVK 182 (186)
T ss_dssp EEEEEEECCHHHHHHHC-HHHHHHHHHTTCC----SSCHH-HH---SCCCCC--SSCSEEEETTTSCHHHHHHHHHHHHH
T ss_pred eEEEEEeCCHHHHHHhh-hhhhhhHHhhcch----hhhhh-hh---hcccCC--CCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 57899999999998763 2221110 0000 01111 11 123334 4689999975333 334455555555
Q ss_pred hh
Q 022183 79 TK 80 (301)
Q Consensus 79 ~~ 80 (301)
..
T Consensus 183 ~~ 184 (186)
T 2yvu_A 183 AV 184 (186)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 149
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=67.89 E-value=6 Score=34.14 Aligned_cols=23 Identities=13% Similarity=0.179 Sum_probs=19.8
Q ss_pred CCeEEEEeCCchhHHHHHhhhcc
Q 022183 1 MNMKIFVDTDADVRLARRIRRDT 23 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~ 23 (301)
.|..||+++|.++++.|-..|..
T Consensus 136 ~d~vi~l~~p~e~~~~Rl~~R~~ 158 (243)
T 3tlx_A 136 LDGVFYFNVPDEVLVNRISGRLI 158 (243)
T ss_dssp CCEEEEEECCHHHHHHHHHTEEE
T ss_pred CceEEEEeCCHHHHHHHHHcCCC
Confidence 37889999999999999888863
No 150
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=67.68 E-value=11 Score=31.93 Aligned_cols=69 Identities=10% Similarity=0.103 Sum_probs=48.5
Q ss_pred eEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhh
Q 022183 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHT 79 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~ 79 (301)
.++|+.++.-..|-+++. .++++-+..+.++....++... +.+ ...||.|+.+. +...|+..+.+.|..
T Consensus 139 ~~~ll~~~~~~~Lde~~~----~~d~~~~~~i~~~l~~~~~~~~-~~h--~~~~d~iiv~~-~~~ea~~~~~~ii~~ 207 (218)
T 1z6g_A 139 LYIFIKPPSTDVLLSRLL----TRNTENQEQIQKRMEQLNIELH-EAN--LLNFNLSIIND-DLTLTYQQLKNYLLN 207 (218)
T ss_dssp EEEEEECSCHHHHHHHHH----HTCCCCHHHHHHHHHHHHHHHH-HHT--TSCCSEEEECS-SHHHHHHHHHHHHHH
T ss_pred EEEEEeCcCHHHHHHHHH----hcCCCCHHHHHHHHHHHHHHHH-hhc--ccCCCEEEECC-CHHHHHHHHHHHHHH
Confidence 679999888888888765 5677767777776766666655 433 37899998763 455677766666654
No 151
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A*
Probab=66.46 E-value=6.3 Score=33.36 Aligned_cols=22 Identities=23% Similarity=0.215 Sum_probs=19.1
Q ss_pred CCeEEEEeCCchhHHHHHhhhc
Q 022183 1 MNMKIFVDTDADVRLARRIRRD 22 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD 22 (301)
.|+.||+++|.++++.|-..|.
T Consensus 106 ~d~vi~l~~~~e~~~~Rl~~R~ 127 (223)
T 2xb4_A 106 INFVIEILLPREVAKNRIMGRR 127 (223)
T ss_dssp CCEEEEEECCHHHHHHHHHTBC
T ss_pred CCEEEEEECCHHHHHHHHHccc
Confidence 3689999999999998888775
No 152
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni}
Probab=64.10 E-value=6.2 Score=33.98 Aligned_cols=78 Identities=19% Similarity=0.395 Sum_probs=40.8
Q ss_pred CCeEEEEeCCchhHHHHHhhhccc-cCCCCHHHHH----HHHHhhccchhHhhccccccccc-EeecCCCCCchhHHHHH
Q 022183 1 MNMKIFVDTDADVRLARRIRRDTV-ERGRDVDSVL----EQYAKFVKPAFDDFVLPSKKYAD-VIIPRGGDNHVAIDLIV 74 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~~-erg~~~~~v~----~~~~~~~~p~~~~~i~P~~~~AD-iii~~~~~~~~~~~~i~ 74 (301)
.|+.||+++|.++.+.|-..|-.. .|-.|-++++ +.|.+...|--+-| ++.-- +.|++.. .++.|.
T Consensus 133 ~~~vi~l~v~~e~~~~Rl~~R~~~~~R~DD~~e~i~~Rl~~Y~~~t~pl~~~Y----~~~~~l~~Idg~~----~~eeV~ 204 (217)
T 3umf_A 133 CLCVINFDVSEEVMRKRLLKRAETSNRVDDNEETIVKRFRTFNELTKPVIEHY----KQQNKVITIDASG----TVDAIF 204 (217)
T ss_dssp CSEEEEEECCHHHHHHHHSCC------CHHHHHHHHHHHHHHHHHTHHHHHHH----HTTTCEEEEETTS----CHHHHH
T ss_pred cCEEEeccCCHHHHHHHHhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHH----HhcCCEEEEECCC----CHHHHH
Confidence 478899999999988777666322 1332333332 23444444433333 11111 3455432 356777
Q ss_pred HHHhhhcccccc
Q 022183 75 QHIHTKLGQHDL 86 (301)
Q Consensus 75 ~~i~~~l~~~~l 86 (301)
+.|.+.|++.++
T Consensus 205 ~~I~~~l~k~G~ 216 (217)
T 3umf_A 205 DKVNHELQKFGV 216 (217)
T ss_dssp HHHHHHHHTTTC
T ss_pred HHHHHHHHHcCC
Confidence 777777666554
No 153
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=62.88 E-value=7.9 Score=31.65 Aligned_cols=65 Identities=11% Similarity=0.209 Sum_probs=21.2
Q ss_pred eEEEEeCC-chhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhhc
Q 022183 3 MKIFVDTD-ADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKL 81 (301)
Q Consensus 3 ~~ifvd~~-~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l 81 (301)
+.+|+.++ .++++.|-..|+ +.+.+.+.+.+.. ..+..+ ....||++|.++ .++.+.+.|.+.+
T Consensus 120 ~~i~~~~~~~~~~~~Rl~~R~----~~~~~~~~~rl~~-~~~~~~-----~~~~~d~vI~n~-----~~e~~~~~i~~~l 184 (207)
T 2j41_A 120 LFIFLAPPSLEHLRERLVGRG----TESDEKIQSRINE-ARKEVE-----MMNLYDYVVVND-----EVELAKNRIQCIV 184 (207)
T ss_dssp EEEEEECCC--------------------------------CGGG-----GGGGCSEEEECS-----SHHHHHHHHHHHH
T ss_pred EEEEEECCCHHHHHHHHHhcC----CCCHHHHHHHHHH-HHHHHh-----ccccCCEEEECC-----CHHHHHHHHHHHH
Confidence 45566543 455555544443 1233333333332 333322 246799999874 2555555555544
Q ss_pred c
Q 022183 82 G 82 (301)
Q Consensus 82 ~ 82 (301)
.
T Consensus 185 ~ 185 (207)
T 2j41_A 185 E 185 (207)
T ss_dssp H
T ss_pred H
Confidence 3
No 154
>1p6x_A Thymidine kinase; P-loop, LID, transferase; HET: THM; 2.00A {Equid herpesvirus 4} SCOP: c.37.1.1 PDB: 1p72_A* 1p73_A* 1p75_A*
Probab=60.88 E-value=2.5 Score=39.15 Aligned_cols=47 Identities=9% Similarity=0.052 Sum_probs=32.2
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhccccc
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSK 53 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~ 53 (301)
|+.||+|+|.++.+.|--.| ||+.|.+-..|++.++-.|.++..-.+
T Consensus 159 DLtIyLd~~pe~~l~RI~~R-----gR~~Eri~~eyl~~vr~~Y~~l~~~~~ 205 (334)
T 1p6x_A 159 GNIVVTTLNVEEHIRRLRTR-----ARIGEQIDITLIATLRNVYFMLVNTCH 205 (334)
T ss_dssp EEEEEEECCHHHHHHHHHHH-----SCTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHhc-----CCCcccCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999984444 333222223677778888888764333
No 155
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=60.67 E-value=17 Score=30.42 Aligned_cols=67 Identities=15% Similarity=0.257 Sum_probs=39.8
Q ss_pred eEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHH
Q 022183 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHI 77 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i 77 (301)
+.||+.+|+.-.|.+|+.. ||++-++.+++-+...+-... +- .....|.||-| .+-..|.+.+.+.|
T Consensus 116 ~~Ifi~pps~e~L~~RL~~----Rg~e~~e~i~~Rl~~a~~e~~-~~--~~~~fD~vIvN-ddle~a~~~l~~iI 182 (186)
T 1ex7_A 116 RFLFIAPPSVEDLKKRLEG----RGTETEESINKRLSAAQAELA-YA--ETGAHDKVIVN-DDLDKAYKELKDFI 182 (186)
T ss_dssp EEEEEECSCHHHHHHHHHH----HCCSCHHHHHHHHHHHHHHHH-HH--TTTCSSEEEEC-SSHHHHHHHHHHHH
T ss_pred eEEEEeCCCHHHHHHHHHh----cCCCCHHHHHHHHHHHHHHHh-hc--cccCCcEEEEC-cCHHHHHHHHHHHH
Confidence 4699999999999999864 787766666554443332221 11 12346877765 23334555544444
No 156
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=57.01 E-value=11 Score=33.18 Aligned_cols=39 Identities=15% Similarity=0.164 Sum_probs=28.7
Q ss_pred eEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccc
Q 022183 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKP 43 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p 43 (301)
+.||+++|.++++.|-..|.. +..+.+.+.++|.++..|
T Consensus 108 ~~i~l~~~~e~~~~R~~~R~~--~~~~~e~i~~~~~~~~~~ 146 (301)
T 1ltq_A 108 EHKVFDVPWTELVKRNSKRGT--KAVPIDVLRSMYKSMREY 146 (301)
T ss_dssp EEEECCCCHHHHHHHHHHCGG--GCCCHHHHHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHhccC--CCCCHHHHHHHHHHHhcc
Confidence 679999999999999888864 344566666666664444
No 157
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=56.36 E-value=15 Score=30.16 Aligned_cols=16 Identities=31% Similarity=0.480 Sum_probs=14.2
Q ss_pred eEEEEeCCchhHHHHH
Q 022183 3 MKIFVDTDADVRLARR 18 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rr 18 (301)
+.||+++|.+++..|+
T Consensus 125 ~~v~L~a~~e~~~~R~ 140 (200)
T 3uie_A 125 VEVFMDVPLSVCEARD 140 (200)
T ss_dssp EEEEECCCHHHHHHHC
T ss_pred EEEEEeCCHHHHHHhc
Confidence 4699999999999886
No 158
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=52.36 E-value=9.5 Score=31.85 Aligned_cols=65 Identities=20% Similarity=0.184 Sum_probs=30.7
Q ss_pred eEEEEeCCchhHHHHHhhhccccCCC-CHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHh
Q 022183 3 MKIFVDTDADVRLARRIRRDTVERGR-DVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIH 78 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rri~RD~~erg~-~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~ 78 (301)
..||+.+++...+.+|+. .||+ +.+.+.....+ .+... +....+|++|.|. +...+.+.+.+.|.
T Consensus 122 ~~i~i~~ps~~~l~~Rl~----~R~~~~~e~i~~Rl~~-~~~e~-----~~~~~~d~vivN~-~~~~~~~~l~~~i~ 187 (208)
T 3tau_A 122 IFIFLTPPDLSELKNRII----GRGTESMEVVEERMET-AKKEI-----EMMASYDYAVVND-VVANAVQKIKGIVE 187 (208)
T ss_dssp EEEEEECTTTTTSSCC-----------CCHHHHHHHHH-HHHHH-----HHGGGSSEEEECS-SHHHHHHHHHHHHH
T ss_pred EEEEEeCCCHHHHHHHHH----hcCCCCHHHHHHHHHH-HHHHH-----HhhccCCEEEECc-CHHHHHHHHHHHHH
Confidence 568999885555555543 3553 33444444332 33221 3345789998763 22233344444443
No 159
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II}
Probab=48.84 E-value=32 Score=28.57 Aligned_cols=22 Identities=23% Similarity=0.238 Sum_probs=19.1
Q ss_pred CeEEEEeCCchhHHHHHhhhcc
Q 022183 2 NMKIFVDTDADVRLARRIRRDT 23 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~ 23 (301)
|+.||+++|.++.+.|-..|..
T Consensus 113 d~vi~L~~~~e~~~~Rl~~R~~ 134 (217)
T 3be4_A 113 TSVIYFEIDDSEIIERISGRCT 134 (217)
T ss_dssp CEEEEEECCHHHHHHHHHTEEE
T ss_pred CEEEEEECCHHHHHHHHHcCCC
Confidence 7899999999999998877753
No 160
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=46.56 E-value=15 Score=29.04 Aligned_cols=37 Identities=16% Similarity=0.150 Sum_probs=25.6
Q ss_pred eEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhc
Q 022183 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFV 41 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~ 41 (301)
..||+++|.++++.|...|... ..+.+.+..+|..+.
T Consensus 108 ~~i~l~~~~~~~~~R~~~R~~~--~~~~~~i~~~~~~~~ 144 (181)
T 1ly1_A 108 EHKVFDVPWTELVKRNSKRGTK--AVPIDVLRSMYKSMR 144 (181)
T ss_dssp EEEECCCCHHHHHHHHTTCGGG--CCCHHHHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHhccccC--CCCHHHHHHHHHHhh
Confidence 5799999999999998887642 344555555555433
No 161
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=43.83 E-value=5.5 Score=40.07 Aligned_cols=68 Identities=12% Similarity=0.329 Sum_probs=36.6
Q ss_pred CeEEEEeCCchhHHHHHhhhccc-cCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCC-chhHHHHHHHHhh
Q 022183 2 NMKIFVDTDADVRLARRIRRDTV-ERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDN-HVAIDLIVQHIHT 79 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~-erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~-~~~~~~i~~~i~~ 79 (301)
++.||+|+|.++++.|..++... .|... +..|. .+++.|+. | ..+|++|+.+... ....+.|++.+..
T Consensus 153 ~~vV~Ldap~Evl~~Rl~r~ly~~aR~~~----~~~~~-~~~~~Ye~---p--~~~dlvIDts~~s~eevv~~Il~~L~~ 222 (630)
T 1x6v_B 153 FFEVFVDAPLHVCEQRDVKGLYKKARAGE----IKGFT-GIDSEYEK---P--EAPELVLKTDSCDVNDCVQQVVELLQE 222 (630)
T ss_dssp EEEEEEECCHHHHHHHCTTSHHHHHTTC--------CB-TTTBCCCC---C--SSCSEEEETTSSCHHHHHHHHHHHHHH
T ss_pred eEEEEEECCHHHHHHHhccccchhhhhhh----HHHHH-Hhhhhhcc---c--CCCcEEEECCCCCHHHHHHHHHHHHHh
Confidence 46899999999998875432211 12111 12232 24444442 3 5789999875433 2334555555543
No 162
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=43.28 E-value=32 Score=29.85 Aligned_cols=81 Identities=14% Similarity=0.105 Sum_probs=47.1
Q ss_pred cchHHHHHHHHhccCCeeeeEEEEecCCCCceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEE
Q 022183 170 SGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFL 249 (301)
Q Consensus 170 aG~~m~~~l~~~~p~a~~G~i~i~Rd~~~~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~ 249 (301)
+|+..+..+++.+|+..+ +.+..+ ...|-.-+... . -..-+..+++.|.+.|+ +-|+++
T Consensus 11 GGltv~~~l~~~lP~~~~--iy~~D~---------~~~Pyg~~s~~------~--i~~~~~~~~~~L~~~g~--d~ivia 69 (255)
T 2jfz_A 11 GGFSVLKSLLKARLFDEI--IYYGDS---------ARVPYGTKDPT------T--IKQFGLEALDFFKPHEI--ELLIVA 69 (255)
T ss_dssp TTHHHHHHHHHTTCCSEE--EEEECT---------TTCCCTTSCHH------H--HHHHHHHHHHHHGGGCC--SCEEEC
T ss_pred cHHHHHHHHHHHCCCCCE--EEEeCC---------CCCCCCCCCHH------H--HHHHHHHHHHHHHHCCC--CEEEEe
Confidence 577789999999998766 111110 23342111111 1 13455667778888888 455555
Q ss_pred EEEeCHHHHHHHHHhCCCcEEEE
Q 022183 250 NLISAPEGIHCVCKRFPSLKIVT 272 (301)
Q Consensus 250 ~~vas~~gl~~l~~~~p~v~i~t 272 (301)
|=-++.-+++.+.+.+ ++.|+.
T Consensus 70 CNTa~~~~~~~lr~~~-~iPvig 91 (255)
T 2jfz_A 70 CNTASALALEEMQKYS-KIPIVG 91 (255)
T ss_dssp CHHHHHHTHHHHHHHC-SSCEEC
T ss_pred CchhhHHHHHHHHHhC-CCCEEe
Confidence 5444434788888887 455554
No 163
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=42.33 E-value=12 Score=36.76 Aligned_cols=68 Identities=16% Similarity=0.244 Sum_probs=33.2
Q ss_pred eEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhhcc
Q 022183 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKLG 82 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l~ 82 (301)
+.||+++|.++++.|- .|....+ +....+.++.. ++ ..|-+| +.||++|++++.. ++.+.+.|.+.+.
T Consensus 472 ~vV~L~~~~e~~~~Rl-~r~~~~~--~~~~~i~~~~~-vr---~~~e~~--~~adivIDts~~s---~eev~~~I~~~L~ 539 (546)
T 2gks_A 472 IEVFVDAPVEVCEERD-VKGLYKK--AKEGLIKGFTG-VD---DPYEPP--VAPEVRVDTTKLT---PEESALKILEFLK 539 (546)
T ss_dssp EEEEEECCGGGHHHHC-CSSHHHH--C------CCBT-TT---BCCCCC--SSCSEEEETTTSC---HHHHHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHh-hcccccc--ccHHHHHHHHh-hh---hccccc--cCCcEEEECCCCC---HHHHHHHHHHHHH
Confidence 7899999999998763 2321100 11122222222 11 123334 5799999875332 3444444444443
No 164
>1osn_A Thymidine kinase, VZV-TK; chickenpox, BVDU-MP, transferase; HET: BVP ADP; 3.20A {Human herpesvirus 3} SCOP: c.37.1.1
Probab=41.88 E-value=7.3 Score=36.08 Aligned_cols=44 Identities=11% Similarity=0.167 Sum_probs=28.2
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcc
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVL 50 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~ 50 (301)
|+.||+|.|.++.+.|--.| ||+.|.+=..|++.++-.|.++..
T Consensus 168 DltI~Ld~~pe~~l~RI~~R-----gR~~Erie~~yl~rvr~~Y~~l~~ 211 (341)
T 1osn_A 168 TNLVVCTVSLPSHLSRVSKR-----ARPGETVNLPFVMVLRNVYIMLIN 211 (341)
T ss_dssp CEEEEEECCHHHHHHHCC-----------CCCCHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCHHHHHHHHHhh-----CCCcccCCHHHHHHHHHHHHHHHH
Confidence 89999999999998885333 322111113677778888888764
No 165
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=41.73 E-value=24 Score=27.97 Aligned_cols=19 Identities=26% Similarity=0.244 Sum_probs=14.3
Q ss_pred eEEEEeCCchhHHHHHhhh
Q 022183 3 MKIFVDTDADVRLARRIRR 21 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rri~R 21 (301)
..||+++|.+++..|-..|
T Consensus 115 ~~v~l~~~~e~l~~R~~~r 133 (178)
T 1qhx_A 115 LWVGVRCDGAVAEGRETAR 133 (178)
T ss_dssp EEEEEECCHHHHHHHHHHT
T ss_pred EEEEEECCHHHHHHHHHhh
Confidence 4678999988887776555
No 166
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=39.79 E-value=1.3e+02 Score=27.21 Aligned_cols=84 Identities=18% Similarity=0.242 Sum_probs=58.5
Q ss_pred eeEEEecccchHHHHHHHHhccCCeeeeEEEEecCCCCceeEeecCCCCCCCcEEEEEcccccchH----HHHHHHHHHH
Q 022183 162 LCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGN----SANQAIQLLI 237 (301)
Q Consensus 162 i~~V~IlRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~~~~~~y~~lP~~i~~~~Vil~Dp~laTG~----t~~~ai~~L~ 237 (301)
+.+++ ..+...|++.+.+.+ +.+.|.+.+.|=.. | ..+.++++++.|++|+|+=+....-+ -+.-.++.++
T Consensus 8 ~~i~~-g~~~~~La~~ia~~l-g~~l~~~~~~~F~d-G--E~~v~i~esvrg~dV~iiqs~~~p~nd~lmeLl~~idA~k 82 (319)
T 3dah_A 8 LMVFT-GNANPALAQEVVKIL-GIPLGKAMVSRFSD-G--EIQVEIQENVRGKDVFVLQSTCAPTNDNLMELMIMVDALK 82 (319)
T ss_dssp EEEEE-CSSCHHHHHHHHHHH-TSCCCCEEEEECTT-S--CEEEEECSCCBTCEEEEECCCCSSHHHHHHHHHHHHHHHH
T ss_pred eEEEE-CCCCHHHHHHHHHHh-CCceeeeEEEECCC-C--CEEEEECCCcCCCeEEEEccCCCCCcHHHHHHHHHHHHHH
Confidence 44443 466677887777665 56777777765432 2 35777888999999999977665433 3566778888
Q ss_pred HcCCCCccEEEEEEE
Q 022183 238 EKGVPESHIIFLNLI 252 (301)
Q Consensus 238 ~~g~~~~~I~~~~~v 252 (301)
+.|+ ++|.++.+.
T Consensus 83 ~asA--~rIt~ViPY 95 (319)
T 3dah_A 83 RASA--GRITAAIPY 95 (319)
T ss_dssp HTTB--SEEEEEESS
T ss_pred HcCC--cEEEEEccC
Confidence 9888 789887754
No 167
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=38.24 E-value=36 Score=28.60 Aligned_cols=23 Identities=13% Similarity=0.260 Sum_probs=19.2
Q ss_pred CCeEEEEeCCchhHHHHHhhhcc
Q 022183 1 MNMKIFVDTDADVRLARRIRRDT 23 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~ 23 (301)
+|..|++++|.++.+.|-..|-+
T Consensus 104 ~~~vi~l~v~~e~l~~Rl~~R~~ 126 (206)
T 3sr0_A 104 VDHVLLFEVPDEVVIERLSGRRI 126 (206)
T ss_dssp CCEEEEEECCHHHHHHHHHTEEE
T ss_pred cceeeecCCCHHHHHHHHhCCcc
Confidence 47789999999999998887743
No 168
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=37.52 E-value=29 Score=34.07 Aligned_cols=67 Identities=16% Similarity=0.317 Sum_probs=22.9
Q ss_pred eEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCc-hhHHHHHHHHh
Q 022183 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNH-VAIDLIVQHIH 78 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~-~~~~~i~~~i~ 78 (301)
+.||+++|.+++..| ..|....+. ....+.++.....| |..| +.||++|+...... ..++.|++.++
T Consensus 471 ~~V~L~~~~e~~~~R-~~r~l~~~~--~~~~i~~l~~~r~~----~e~P--~~adl~Idt~~~s~~e~v~~Il~~L~ 538 (552)
T 3cr8_A 471 VEIHVATPIETCESR-DRKGLYAKA--RAGLIPEFTGVSDP----YEVP--ETPELAIDTTGLAIDEAVQQILLKLE 538 (552)
T ss_dssp EEEEECC--------------------------------CC----CCCC--SSCSEEECCSSCCHHHHHHHHHHHHH
T ss_pred EEEEEcCCHHHHHHh-ccccccccc--cHhHHHHHHhcccc----ccCC--CCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 679999999988877 333322111 11123333322333 3345 46899998654332 33445555544
No 169
>3ch4_B Pmkase, phosphomevalonate kinase; parallel beta-sheet with the strand order 23145, walker A motif, cholesterol biosynthesis, lipid synthesis; 1.76A {Homo sapiens}
Probab=35.60 E-value=47 Score=28.25 Aligned_cols=63 Identities=16% Similarity=0.106 Sum_probs=36.3
Q ss_pred EEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCc---hhHHHHHHHHhhh
Q 022183 4 KIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNH---VAIDLIVQHIHTK 80 (301)
Q Consensus 4 ~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~---~~~~~i~~~i~~~ 80 (301)
.|+|+++.++|+.|-. ...+|++-.+ -+-=+.+. ..||++|.|.+... ..++.++..++..
T Consensus 130 iirI~as~~~R~~Rg~---~~~~~~Dd~e------------sE~gL~~~-~~~D~vI~Ndgt~eel~~~v~~ll~~~~~~ 193 (202)
T 3ch4_B 130 TVRVVALEQSRQQRGW---VFTPGVDDAE------------SECGLDNF-GDFDWVIENHGVEQRLEEQLENLIEFIRSR 193 (202)
T ss_dssp EEEEEECHHHHHHTTC---CCCTTTTTSH------------HHHTTTTC-CCCSEEEEECSCHHHHHHHHHHHHHHHHTT
T ss_pred EEEEECCHHHHHHHhh---hccccccccc------------cccCCCCC-CcCCEEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 5899999999999931 1122333111 12223444 68999999866433 1334555555555
Q ss_pred cc
Q 022183 81 LG 82 (301)
Q Consensus 81 l~ 82 (301)
|.
T Consensus 194 ~~ 195 (202)
T 3ch4_B 194 LK 195 (202)
T ss_dssp CC
T ss_pred Hh
Confidence 44
No 170
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=34.68 E-value=45 Score=32.79 Aligned_cols=16 Identities=13% Similarity=0.027 Sum_probs=14.6
Q ss_pred eEEEEeCCchhHHHHH
Q 022183 3 MKIFVDTDADVRLARR 18 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rr 18 (301)
+.||+++|.+++..|+
T Consensus 498 ~~V~Lda~~ev~~~R~ 513 (573)
T 1m8p_A 498 FLVHVATPLEHCEQSD 513 (573)
T ss_dssp EEEEECCCHHHHHHHC
T ss_pred EEEEEeCCHHHHHHHh
Confidence 7899999999999884
No 171
>1dek_A Deoxynucleoside monophosphate kinase; transferase, phosphotransferase; HET: DGP; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1 PDB: 1del_A*
Probab=34.13 E-value=57 Score=28.29 Aligned_cols=22 Identities=18% Similarity=0.143 Sum_probs=19.4
Q ss_pred CeEEEEeCCchhHHHHHhhhcc
Q 022183 2 NMKIFVDTDADVRLARRIRRDT 23 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~ 23 (301)
|..|.+|++.+.++.|=..|+.
T Consensus 169 d~VvVvdv~~~~qieRl~~rg~ 190 (241)
T 1dek_A 169 DYYIVPDTRQDHEMDAARAMGA 190 (241)
T ss_dssp SEEEECCCCSHHHHHHHHHTTC
T ss_pred CEEEEEcCCcHHHHHHHHHCCC
Confidence 6778999999999999988874
No 172
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=33.60 E-value=2.4e+02 Score=24.78 Aligned_cols=78 Identities=13% Similarity=0.236 Sum_probs=53.3
Q ss_pred ccchHHHHHHHHhccCCeeeeEEEEecCCCCceeEeecCCCCCCCcEEEEEcccccc-hH--HHHHHHHHHHHcCCCCcc
Q 022183 169 RSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLAT-GN--SANQAIQLLIEKGVPESH 245 (301)
Q Consensus 169 RaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~~~~~~y~~lP~~i~~~~Vil~Dp~laT-G~--t~~~ai~~L~~~g~~~~~ 245 (301)
.+...+.+.+.+.+ +.+.|.+.+.|=.. ...|.++++++.|++|+++-+.... .. -+...++.+++.|+ ++
T Consensus 7 ~~~~~la~~ia~~l-~~~l~~~~~~~F~d---GE~~v~i~~~vrg~dv~iiqs~~~pn~~lmell~~~~a~~~~~a--~~ 80 (284)
T 1u9y_A 7 SQSQNLAFKVAKLL-NTKLTRVEYKRFPD---NEIYVRIVDEINDDEAVIINTQKNQNDAIVETILLCDALRDEGV--KK 80 (284)
T ss_dssp TTCHHHHHHHHHHT-TCCEECEEEEECTT---CCEEEEECSCCCSSEEEEECCCSSHHHHHHHHHHHHHHHHTTTC--CE
T ss_pred CCCHHHHHHHHHHh-CCeeeeeEEEECCC---CCEEEEeCCCCCCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC--ce
Confidence 44556666666553 57777777765322 2357788889999999999887653 12 44556778888888 78
Q ss_pred EEEEEEE
Q 022183 246 IIFLNLI 252 (301)
Q Consensus 246 I~~~~~v 252 (301)
|.++.+.
T Consensus 81 i~~v~Py 87 (284)
T 1u9y_A 81 ITLVAPY 87 (284)
T ss_dssp EEEECSS
T ss_pred EEEEecc
Confidence 8777643
No 173
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=33.20 E-value=1.7e+02 Score=24.38 Aligned_cols=56 Identities=14% Similarity=0.365 Sum_probs=35.9
Q ss_pred CCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCCcEEE
Q 022183 211 ISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIV 271 (301)
Q Consensus 211 i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~gl~~l~~~~p~v~i~ 271 (301)
+++++|+|. -+||+-=.+..+.|.+.|. ++|+++.--..++.++++.+.++..++.
T Consensus 3 l~~k~vlVt---Gas~gIG~~~a~~l~~~G~--~~v~~~~r~~~~~~~~~l~~~~~~~~~~ 58 (254)
T 1sby_A 3 LTNKNVIFV---AALGGIGLDTSRELVKRNL--KNFVILDRVENPTALAELKAINPKVNIT 58 (254)
T ss_dssp CTTCEEEEE---TTTSHHHHHHHHHHHHTCC--SEEEEEESSCCHHHHHHHHHHCTTSEEE
T ss_pred CCCcEEEEE---CCCChHHHHHHHHHHHCCC--cEEEEEecCchHHHHHHHHHhCCCceEE
Confidence 567888876 4567777778888888887 3354443222236677887776643433
No 174
>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*
Probab=32.61 E-value=72 Score=28.50 Aligned_cols=66 Identities=12% Similarity=0.214 Sum_probs=36.1
Q ss_pred eEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhh
Q 022183 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (301)
+.|||.+|+--.|.+|+.| ||.+- .-..+.+..+ ....| ..+.|.||.| .+...|.+.+.+.|...
T Consensus 212 i~IFI~PpS~e~L~~r~~~----r~~e~--~~~~~~r~~k-~e~e~----~~~fD~vIvN-ddle~a~~~l~~iI~~e 277 (292)
T 3tvt_A 212 VAVFIKPKSVDSVMEMNRR----MTEEQ--AKKTYERAIK-MEQEF----GEYFTGVVQG-DTIEEIYSKVKSMIWSQ 277 (292)
T ss_dssp EEEEECCSCHHHHHHTCTT----SCTTH--HHHHHHHHHH-HHHHH----TTTCSEEECC-SSHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCHHHHHHHHhC----CCchh--HHHHHHHHHH-HHHhh----hhhCCEEEEC-cCHHHHHHHHHHHHHHh
Confidence 5799999998888877654 33332 2222232221 22233 3468999975 23344555555555443
No 175
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=32.40 E-value=74 Score=26.22 Aligned_cols=52 Identities=19% Similarity=0.348 Sum_probs=30.2
Q ss_pred cEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchh
Q 022183 214 RHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFG 293 (301)
Q Consensus 214 ~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~gl~~l~~~~p~v~i~t~~iD~~l~~~~~ivPGlGd~G 293 (301)
++|+|+|=-...=.|+..| |++.|+. +. ++..++-++. -++-|+||-|+++
T Consensus 3 ~~I~iiD~g~~n~~si~~a---l~~~G~~---~~---v~~~~~~l~~--------------------~D~lilPG~g~~~ 53 (211)
T 4gud_A 3 QNVVIIDTGCANISSVKFA---IERLGYA---VT---ISRDPQVVLA--------------------ADKLFLPGVGTAS 53 (211)
T ss_dssp CCEEEECCCCTTHHHHHHH---HHHTTCC---EE---EECCHHHHHH--------------------CSEEEECCCSCHH
T ss_pred CEEEEEECCCChHHHHHHH---HHHCCCE---EE---EECCHHHHhC--------------------CCEEEECCCCCHH
Confidence 4688898543222455544 5567984 22 3445543321 2367999999887
Q ss_pred h
Q 022183 294 D 294 (301)
Q Consensus 294 d 294 (301)
+
T Consensus 54 ~ 54 (211)
T 4gud_A 54 E 54 (211)
T ss_dssp H
T ss_pred H
Confidence 5
No 176
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=32.30 E-value=1.1e+02 Score=22.26 Aligned_cols=46 Identities=20% Similarity=0.226 Sum_probs=33.9
Q ss_pred CCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCC
Q 022183 212 SERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPS 267 (301)
Q Consensus 212 ~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~gl~~l~~~~p~ 267 (301)
+++.|++++ .+|.....|...|++.|. ++|.. -..|+....++...
T Consensus 51 ~~~~ivvyc---~~g~rs~~a~~~L~~~G~--~~v~~-----l~GG~~~W~~~g~~ 96 (106)
T 3hix_A 51 KSRDIYVYG---AGDEQTSQAVNLLRSAGF--EHVSE-----LKGGLAAWKAIGGP 96 (106)
T ss_dssp TTSCEEEEC---SSHHHHHHHHHHHHHTTC--SCEEE-----CTTHHHHHHHTTCC
T ss_pred CCCeEEEEE---CCCChHHHHHHHHHHcCC--cCEEE-----ecCCHHHHHHCCCC
Confidence 356677775 578888999999999998 46543 25688888776654
No 177
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=31.58 E-value=81 Score=26.91 Aligned_cols=56 Identities=14% Similarity=0.202 Sum_probs=35.1
Q ss_pred EEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeC------HHHHHHHHHhCCCcEEEEEee
Q 022183 215 HVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISA------PEGIHCVCKRFPSLKIVTSEI 275 (301)
Q Consensus 215 ~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas------~~gl~~l~~~~p~v~i~t~~i 275 (301)
.++|+||... ......++.|++. ...++|.. ++.+ -.|+..+.+++|+++||+..-
T Consensus 52 ~~iLID~G~~--~~~~~~~~~l~~~-~~~~~i~~--IilTH~H~DH~gg~~~l~~~~~~~~v~~~~~ 113 (262)
T 3hnn_A 52 KTAIIDPPVE--SFMKIYLEALQQT-VNLKKLDY--VILGHFSPNRIPTFKALLELAPQITFVCSLP 113 (262)
T ss_dssp SEEEECCCCH--HHHHHHHHHHHHH-SCGGGEEE--EECSSCCGGGHHHHHHHHHHCTTCEEEECHH
T ss_pred CEEEEECCCc--chHHHHHHHHHHh-CChhhCCE--EEECCCCcchhchHHHHHHHCCCCEEEECHH
Confidence 5899998654 2333444555554 22245533 3323 458889999999999998643
No 178
>3ix9_A Dihydrofolate reductase; central beta sheet surrounded by 4 alpha helices, oxidoreductase; HET: NDP MTX; 1.95A {Streptococcus pneumoniae}
Probab=31.35 E-value=1.2e+02 Score=25.18 Aligned_cols=53 Identities=11% Similarity=0.275 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchhhhccCC
Q 022183 227 NSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 299 (301)
Q Consensus 227 ~t~~~ai~~L~~~g~~~~~I~~~~~vas~~gl~~l~~~~p~v~i~t~~iD~~l~~~~~ivPGlGd~GdR~fgt 299 (301)
+++..+++.|++.| ++|. ++.+.+=.+.+....+ +++.. ++|..|+ ||++|..
T Consensus 101 ~~~~eal~~lk~~~---~~i~---ViGG~~ly~~~l~liD--el~lt-----------~ip~~g~-Gd~lFp~ 153 (190)
T 3ix9_A 101 HDVQSVLDWYSAQE---KNLY---IVGGKQIFQAFEPYLD--EVIVT-----------HIHARVE-GDTYFPA 153 (190)
T ss_dssp SSHHHHHHHHHTSC---SCEE---EEECHHHHHHHGGGCS--EEEEE-----------EESSCCC-CSEECCC
T ss_pred CCHHHHHHHHHhCC---CCEE---EECCHHHHHHHHhhCC--EEEEE-----------EeCcccc-cCCcCCC
Confidence 46888999998763 4554 4556665666654444 44443 4455543 6777753
No 179
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=31.04 E-value=98 Score=26.03 Aligned_cols=65 Identities=20% Similarity=0.290 Sum_probs=39.4
Q ss_pred eEEEEeCCchhHHHHHhhhccccCCC-CHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHh
Q 022183 3 MKIFVDTDADVRLARRIRRDTVERGR-DVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIH 78 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rri~RD~~erg~-~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~ 78 (301)
..||+-++.--.+.+|+ ..||. +.+++...+.+ .+... +.....|.+|.| .+...+.+.+.+.|.
T Consensus 131 ~tI~i~th~~~~l~~Rl----~~rG~~~~e~i~~rl~~-a~~e~-----~~~~~~d~~i~N-d~l~~a~~~l~~ii~ 196 (219)
T 1s96_A 131 RSIFILPPSKIELDRRL----RGRGQDSEEVIAKRMAQ-AVAEM-----SHYAEYDYLIVN-DDFDTALTDLKTIIR 196 (219)
T ss_dssp EEEEEECSSHHHHHHHH----HTTSCSCHHHHHHHHHH-HHHHH-----TTGGGSSEEEEC-SSHHHHHHHHHHHHH
T ss_pred EEEEEECCCHHHHHHHH----HHcCCCCHHHHHHHHHH-HHHHH-----hhccCCCEEEEC-cCHHHHHHHHHHHHH
Confidence 57899888766777776 46775 56666666554 22221 233567888877 333445555555554
No 180
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=30.81 E-value=2.8e+02 Score=25.18 Aligned_cols=79 Identities=10% Similarity=0.101 Sum_probs=55.3
Q ss_pred cccchHHHHHHHHhccCCeeeeEEEEecCCCCceeEeecCCCCCCCcEEEEEcccccchH----HHHHHHHHHHHcCCCC
Q 022183 168 VRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGN----SANQAIQLLIEKGVPE 243 (301)
Q Consensus 168 lRaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~~~~~~y~~lP~~i~~~~Vil~Dp~laTG~----t~~~ai~~L~~~g~~~ 243 (301)
..+...+++.+.+.+ +.+.|.+.+.|=.. | ..|.++++++.|+.|+++=++...=+ -+.-.++.+++.|+
T Consensus 9 g~~~~~La~~ia~~l-g~~l~~~~~~~F~d-G--E~~v~i~esvrg~dV~iiqs~~~p~nd~lmeLl~~idA~k~asA-- 82 (326)
T 3s5j_B 9 GSSHQDLSQKIADRL-GLELGKVVTKKFSN-Q--ETCVEIGESVRGEDVYIVQSGCGEINDNLMELLIMINACKIASA-- 82 (326)
T ss_dssp CSSCCHHHHHHHHHT-TCCCCCEEEEECTT-S--CEEEEECSCCTTCEEEEECCCCSCHHHHHHHHHHHHHHHHHTTC--
T ss_pred CCCCHHHHHHHHHHh-CCceeeeEEeECCC-C--CEEEEECCCcCCCcEEEEecCCCCccHHHHHHHHHHHHHHhcCC--
Confidence 356667777777665 56677777765322 1 35778889999999999987765422 34566778888888
Q ss_pred ccEEEEEEE
Q 022183 244 SHIIFLNLI 252 (301)
Q Consensus 244 ~~I~~~~~v 252 (301)
++|.++.+.
T Consensus 83 ~rIt~ViPY 91 (326)
T 3s5j_B 83 SRVTAVIPC 91 (326)
T ss_dssp SEEEEEESS
T ss_pred cEEEEeccC
Confidence 789887754
No 181
>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A
Probab=30.62 E-value=46 Score=30.67 Aligned_cols=72 Identities=15% Similarity=0.175 Sum_probs=43.8
Q ss_pred eEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhhcc
Q 022183 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKLG 82 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l~ 82 (301)
+.|||-+|+--.|.+|+. .||.+.+..++.-.....-.+. -.....|+||-| .+...|.+.+.+.|...+.
T Consensus 253 i~IFI~PPS~eeLe~RL~----~RGt~~~~rl~~al~~ae~E~~----~~~~~FDyvIVN-DdLe~A~~~L~~iI~~~~~ 323 (337)
T 4dey_A 253 IVVYVKISSPKVLQRLIK----SRGKSQAKHLNVQMVAADKLAQ----CPPELFDVILDE-NQLEDACEHLADYLEAYWK 323 (337)
T ss_dssp EEEEECCSCHHHHHHHHH----TTCHHHHTTHHHHHHHHHHHHH----SCGGGCSEEECC-SSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECcCHHHHHHHHH----hCCchHHHHHHHHHHHHHHHHh----hCcccCCEEEEC-CCHHHHHHHHHHHHHHHHh
Confidence 579999999999999976 4676555444443221211111 123577888876 3344566666666666544
Q ss_pred c
Q 022183 83 Q 83 (301)
Q Consensus 83 ~ 83 (301)
.
T Consensus 324 ~ 324 (337)
T 4dey_A 324 A 324 (337)
T ss_dssp H
T ss_pred c
Confidence 3
No 182
>3gmt_A Adenylate kinase; ssgcid, ATP-BIN cytoplasm, nucleotide biosynthesis, nucleotide-BIND transferase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=28.78 E-value=33 Score=29.77 Aligned_cols=23 Identities=17% Similarity=0.185 Sum_probs=20.3
Q ss_pred CCeEEEEeCCchhHHHHHhhhcc
Q 022183 1 MNMKIFVDTDADVRLARRIRRDT 23 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD~ 23 (301)
.|+.||+++|.++.+.|-..|.+
T Consensus 111 ~d~VI~Ldvp~e~l~~Rl~~R~~ 133 (230)
T 3gmt_A 111 IDYVLEIDVPFSEIIERMSGRRT 133 (230)
T ss_dssp CSEEEEECCCHHHHHHHHHTEEE
T ss_pred ccEEEEEeCCHHHHHHHHHcCCc
Confidence 47899999999999999888864
No 183
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=28.68 E-value=92 Score=21.47 Aligned_cols=32 Identities=25% Similarity=0.328 Sum_probs=24.2
Q ss_pred CCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEE
Q 022183 212 SERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIF 248 (301)
Q Consensus 212 ~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~ 248 (301)
+++.|+++. .+|.....|...|++.|. +++..
T Consensus 40 ~~~~ivv~C---~~g~rs~~aa~~L~~~G~--~~v~~ 71 (85)
T 2jtq_A 40 KNDTVKVYC---NAGRQSGQAKEILSEMGY--THVEN 71 (85)
T ss_dssp TTSEEEEEE---SSSHHHHHHHHHHHHTTC--SSEEE
T ss_pred CCCcEEEEc---CCCchHHHHHHHHHHcCC--CCEEe
Confidence 456777765 478888889999999998 46654
No 184
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=27.77 E-value=1.6e+02 Score=24.91 Aligned_cols=56 Identities=25% Similarity=0.453 Sum_probs=37.4
Q ss_pred CcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeC------HHHHHHHHHhCCCcEEEEEeec
Q 022183 213 ERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISA------PEGIHCVCKRFPSLKIVTSEID 276 (301)
Q Consensus 213 ~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas------~~gl~~l~~~~p~v~i~t~~iD 276 (301)
++.++|+||...++. ..++.|++.|. +| -.++.+ -.|+..+.+++|+++||+..-+
T Consensus 27 ~~~~ilID~g~~~~~---~~~~~l~~~g~---~i--~~Il~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~ 88 (245)
T 2gcu_A 27 DKPALLIDPVDKTVD---RDLKLIDELGL---KL--IYAMNTHVHADHVTGTGLLKTKLPGVKSVISKAS 88 (245)
T ss_dssp TCEEEEESCBGGGHH---HHHHHHHHHTC---EE--EEEECSSCCSSSCBSHHHHHHHSTTCEEEEEGGG
T ss_pred CCcEEEEeCCCchHH---HHHHHHHHCCC---ee--eEEEeCCCChhhhhhHHHHHHhCCCCeEEecccc
Confidence 467999999886544 34556666676 23 334333 2477788877899999987543
No 185
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=27.68 E-value=83 Score=26.45 Aligned_cols=22 Identities=18% Similarity=0.146 Sum_probs=18.0
Q ss_pred CCeEEEEeCCchhHHHHHhhhc
Q 022183 1 MNMKIFVDTDADVRLARRIRRD 22 (301)
Q Consensus 1 ~d~~ifvd~~~d~rl~Rri~RD 22 (301)
+|+.||+++|.++.+.|...|.
T Consensus 128 ~~~vi~L~~~~~~~l~r~~~r~ 149 (246)
T 2bbw_A 128 VDLVISLNIPFETLKDRLSRRW 149 (246)
T ss_dssp CCEEEEEECCHHHHHHHHHTEE
T ss_pred CCEEEEEECCHHHHHHHHHcCC
Confidence 3678999999999988766664
No 186
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=27.53 E-value=86 Score=22.77 Aligned_cols=45 Identities=24% Similarity=0.436 Sum_probs=32.1
Q ss_pred CCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCC
Q 022183 212 SERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFP 266 (301)
Q Consensus 212 ~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~gl~~l~~~~p 266 (301)
+++.|+++. .+|.....|...|++.|. +++..+ ..|+....+++|
T Consensus 57 ~~~~ivvyc---~~g~rs~~a~~~L~~~G~--~~v~~l-----~GG~~~W~~~~p 101 (108)
T 1gmx_A 57 FDTPVMVMC---YHGNSSKGAAQYLLQQGY--DVVYSI-----DGGFEAWQRQFP 101 (108)
T ss_dssp TTSCEEEEC---SSSSHHHHHHHHHHHHTC--SSEEEE-----TTHHHHHHHHCG
T ss_pred CCCCEEEEc---CCCchHHHHHHHHHHcCC--ceEEEe-----cCCHHHHHHhCC
Confidence 356777775 478888889999999998 466432 467777666665
No 187
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=27.43 E-value=1.3e+02 Score=25.95 Aligned_cols=52 Identities=17% Similarity=0.354 Sum_probs=35.7
Q ss_pred CcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeC------HHHHHHHHHhCCCcEEEEEe
Q 022183 213 ERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISA------PEGIHCVCKRFPSLKIVTSE 274 (301)
Q Consensus 213 ~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas------~~gl~~l~~~~p~v~i~t~~ 274 (301)
++..+|+||. .+. ..++.|++.|. +| -.++.+ -.|+..+.+++|+++||+..
T Consensus 22 ~~~~vlID~G--~~~---~i~~~l~~~g~---~i--~~IllTH~H~DH~gg~~~l~~~~~~~~v~~~~ 79 (260)
T 1qh5_A 22 TKEAAIVDPV--QPQ---KVVDAARKHGV---KL--TTVLTTHHHWDHAGGNEKLVKLESGLKVYGGD 79 (260)
T ss_dssp TTEEEEESCS--SHH---HHHHHHHHHTC---EE--EEEECCCSSHHHHTTHHHHHHHSTTCEEEESC
T ss_pred CCEEEEEcCC--CHH---HHHHHHHHcCC---Cc--cEEEeCCCCccccCCHHHHHHHCCCCEEEECc
Confidence 4678999986 333 34566677776 23 344443 34788899999999999874
No 188
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=26.30 E-value=87 Score=28.24 Aligned_cols=35 Identities=23% Similarity=0.394 Sum_probs=28.6
Q ss_pred CCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEE
Q 022183 210 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLN 250 (301)
Q Consensus 210 ~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~ 250 (301)
++++++++|+ .+|++..+++..|.+.|+ ++|.+++
T Consensus 145 ~l~gk~~lVl----GAGGaaraia~~L~~~G~--~~v~v~n 179 (312)
T 3t4e_A 145 DMRGKTMVLL----GAGGAATAIGAQAAIEGI--KEIKLFN 179 (312)
T ss_dssp CCTTCEEEEE----CCSHHHHHHHHHHHHTTC--SEEEEEE
T ss_pred CcCCCEEEEE----CcCHHHHHHHHHHHHcCC--CEEEEEE
Confidence 4678999876 469999999999999998 5776655
No 189
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=25.49 E-value=1.9e+02 Score=24.50 Aligned_cols=47 Identities=17% Similarity=0.196 Sum_probs=29.9
Q ss_pred cchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCCcEEEEEe
Q 022183 224 ATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSE 274 (301)
Q Consensus 224 aTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~gl~~l~~~~p~v~i~t~~ 274 (301)
.|..++..|++..++.|. ++|++++ ++.+.-.++.+.+.+++|++..
T Consensus 27 NT~~tl~la~era~e~~I--k~iVVAS--~sG~TA~k~~e~~~~i~lVvVT 73 (201)
T 1vp8_A 27 NTEETLRLAVERAKELGI--KHLVVAS--SYGDTAMKALEMAEGLEVVVVT 73 (201)
T ss_dssp GHHHHHHHHHHHHHHHTC--CEEEEEC--SSSHHHHHHHHHCTTCEEEEEE
T ss_pred cHHHHHHHHHHHHHHcCC--CEEEEEe--CCChHHHHHHHHhcCCeEEEEe
Confidence 478888888888888887 5563332 3333444555566667766654
No 190
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=24.78 E-value=1.1e+02 Score=26.82 Aligned_cols=55 Identities=16% Similarity=0.292 Sum_probs=36.9
Q ss_pred CCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEE--eCHHHHHHHHHhCCCcEE
Q 022183 210 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLI--SAPEGIHCVCKRFPSLKI 270 (301)
Q Consensus 210 ~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~v--as~~gl~~l~~~~p~v~i 270 (301)
+.++++++| +.+||+..+++-.|.+.|+ ++|.+++-= -+.+-.+.+...+|.+.+
T Consensus 122 ~~~~~~~li----lGaGGaarai~~aL~~~g~--~~i~i~nRt~~ra~~la~~~~~~~~~~~~ 178 (269)
T 3tum_A 122 EPAGKRALV----IGCGGVGSAIAYALAEAGI--ASITLCDPSTARMGAVCELLGNGFPGLTV 178 (269)
T ss_dssp CCTTCEEEE----ECCSHHHHHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHHCTTCEE
T ss_pred CcccCeEEE----EecHHHHHHHHHHHHHhCC--CeEEEeCCCHHHHHHHHHHHhccCCccee
Confidence 456788876 4689999999999999998 567666521 112223445556776554
No 191
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=24.24 E-value=1.8e+02 Score=26.78 Aligned_cols=51 Identities=22% Similarity=0.346 Sum_probs=39.8
Q ss_pred hHHHHHHHHHHHHcCCCCccEEEEEEEeC------------------HHHHHHHHHhCCCcEEEEE-eecCC
Q 022183 226 GNSANQAIQLLIEKGVPESHIIFLNLISA------------------PEGIHCVCKRFPSLKIVTS-EIDVA 278 (301)
Q Consensus 226 G~t~~~ai~~L~~~g~~~~~I~~~~~vas------------------~~gl~~l~~~~p~v~i~t~-~iD~~ 278 (301)
=..+...++.+.+.|+ ..|.+..+... +.+++.|.++||++-|+|- |+|+-
T Consensus 68 id~l~~~~~~~~~lGi--~~v~LFgv~~~~~~KD~~gs~A~~~~g~v~rair~iK~~~pdl~VitDvcLc~Y 137 (342)
T 1h7n_A 68 VNRLKDYLKPLVAKGL--RSVILFGVPLIPGTKDPVGTAADDPAGPVIQGIKFIREYFPELYIICDVCLCEY 137 (342)
T ss_dssp HHHHHHHHHHHHHTTC--CEEEEEEECCSTTCCBTTCGGGGCTTSHHHHHHHHHHHHCTTSEEEEEECSTTT
T ss_pred HHHHHHHHHHHHHCCC--CEEEEecccCccCCCCccccccCCCCChHHHHHHHHHHHCCCeEEEEeeecccc
Confidence 3578899999999999 57888887532 4678899999999887773 56654
No 192
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=23.51 E-value=79 Score=23.69 Aligned_cols=67 Identities=16% Similarity=0.140 Sum_probs=42.1
Q ss_pred ccccEeecCCCCCchhH-----------------HHHHHHHhhhccccccccCCCceeeccchHHHHHHh-hhhhcCCCC
Q 022183 54 KYADVIIPRGGDNHVAI-----------------DLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMH-TLIRDRGIS 115 (301)
Q Consensus 54 ~~ADiii~~~~~~~~~~-----------------~~i~~~i~~~l~~~~l~~~~~~v~vl~~~~~~~~~l-t~LRd~~T~ 115 (301)
..||+||-|.....+|+ +.+...|++.-++++ |-+++++++++.|. +.=.+...|
T Consensus 7 ~~A~vvitNPth~AVAL~Yd~~~~~aP~VvAKG~~~~A~~I~~~A~e~g-------VPi~e~~~LAr~L~~~~~ig~~IP 79 (97)
T 3t7y_A 7 KHASAVVSAPKDIAVAIGYMPEKYKAPWIIAMGVNLRAKRIIAEAEKYG-------VPIMRNVPLAHQLLDEGKELKFIP 79 (97)
T ss_dssp GGCSEEEEETTTEEEEEECCTTTCSSCEEEEEEEHHHHHHHHHHHHHHT-------CCEEECHHHHHHHHHHCCBTSBCC
T ss_pred CCCCEEEECCCcEEEEEEecCCCCCCCEEEEEeCcHHHHHHHHHHHHcC-------CeEEECHHHHHHHHHcCCCCCccC
Confidence 57888887655543333 445556665554444 66778888888888 444477787
Q ss_pred hhhhHhhHHHHH
Q 022183 116 KHDFVFYSDRLI 127 (301)
Q Consensus 116 ~~~Fr~~~~rl~ 127 (301)
...|..-++-|.
T Consensus 80 ~ely~aVAeiLa 91 (97)
T 3t7y_A 80 ETTYEAVGEILL 91 (97)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777665554443
No 193
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=23.45 E-value=1.3e+02 Score=21.61 Aligned_cols=17 Identities=6% Similarity=0.255 Sum_probs=10.2
Q ss_pred CCCcEEEEEcccccchH
Q 022183 211 ISERHVLLLDPVLATGN 227 (301)
Q Consensus 211 i~~~~Vil~Dp~laTG~ 227 (301)
..+++|+++|+--....
T Consensus 5 ~~~~~ilivdd~~~~~~ 21 (130)
T 3eod_A 5 LVGKQILIVEDEQVFRS 21 (130)
T ss_dssp TTTCEEEEECSCHHHHH
T ss_pred CCCCeEEEEeCCHHHHH
Confidence 44567788776544433
No 194
>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A
Probab=23.30 E-value=1.2e+02 Score=26.80 Aligned_cols=66 Identities=12% Similarity=0.175 Sum_probs=36.8
Q ss_pred eEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccccccccEeecCCCCCchhHHHHHHHHhhh
Q 022183 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (301)
Q Consensus 3 ~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (301)
+.|||.+|+--.|.+ + ..||.+ +++...+.+..+ ....| ....|.+|.|. +-..|.+.+.+.|...
T Consensus 217 i~IfI~pps~~~L~~-L----~~R~t~-~~i~~rl~~a~~-~e~~~----~~~fd~vivNd-~le~a~~~l~~ii~~~ 282 (295)
T 1kjw_A 217 IAIFIRPRSLENVLE-I----NKRITE-EQARKAFDRATK-LEQEF----TECFSAIVEGD-SFEEIYHKVKRVIEDL 282 (295)
T ss_dssp EEEEECCSSHHHHHH-H----CTTSCH-HHHHHHHHHHHH-HHHHH----GGGCSEEECCS-SHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCHHHHHH-H----HhcCCH-HHHHHHHHHHHH-HHHhc----cccCeEEEECc-CHHHHHHHHHHHHHhc
Confidence 579999887666666 3 347754 445444444222 11122 24678888763 4445556665555543
No 195
>1e2k_A Thymidine kinase; transferase, antiviral drug, enzyme-prodrug gene therapy, sugar ring pucker; HET: TMC; 1.7A {Herpes simplex virus} SCOP: c.37.1.1 PDB: 1e2i_A* 1e2h_A* 1e2m_A* 1e2n_A* 1e2p_A* 1ki2_A* 1ki3_A* 1ki4_A* 1ki6_B* 1ki7_A* 1ki8_A* 3rdp_A* 2ki5_A* 1kim_A* 1qhi_A* 1p7c_A* 1vtk_A* 2vtk_A* 3vtk_A* 3f0t_A* ...
Probab=22.89 E-value=27 Score=31.98 Aligned_cols=46 Identities=9% Similarity=0.060 Sum_probs=29.3
Q ss_pred CeEEEEeCCchhHHHHHhhhccccCCCCHHHHHHHHHhhccchhHhhcccc
Q 022183 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPS 52 (301)
Q Consensus 2 d~~ifvd~~~d~rl~Rri~RD~~erg~~~~~v~~~~~~~~~p~~~~~i~P~ 52 (301)
|+.++.|.|.++.+.|--.| ||+.|.+-..|++.++-.|..+.+-.
T Consensus 156 dlt~lldl~pe~~l~RI~~R-----gr~~Eri~~~yl~rvr~~Y~~l~~t~ 201 (331)
T 1e2k_A 156 TNIVLGALPEDRHIDRLAKR-----QRPGERLDLAMLAAIRRVYGLLANTV 201 (331)
T ss_dssp CEEEEEECCHHHHHHHHHHS-----CCTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHhc-----CCCcccCCHHHHHHHHHHHHHHHHHH
Confidence 56777788999998885444 44322223456666777777765433
No 196
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=22.32 E-value=68 Score=27.99 Aligned_cols=82 Identities=11% Similarity=0.129 Sum_probs=46.4
Q ss_pred ccchHHHHHHHHhccCCeeeeEEEEecCCCCceeEeecCCCCCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEE
Q 022183 169 RSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIF 248 (301)
Q Consensus 169 RaG~~m~~~l~~~~p~a~~G~i~i~Rd~~~~~~~~y~~lP~~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~ 248 (301)
=+|+.++..+++.+|...+= .+ .|. ..+|-..++.. .+ -.-+..+++.|.++|+ +-|++
T Consensus 13 vGGltv~~~i~~~lP~~~~i--y~-~D~--------~~~Pyg~~s~~------~i--~~~~~~~~~~L~~~g~--d~ivi 71 (267)
T 2gzm_A 13 VGGLTVAKELIRQLPKERII--YL-GDT--------ARCPYGPRSRE------EV--RQFTWEMTEHLLDLNI--KMLVI 71 (267)
T ss_dssp STTHHHHHHHHHHCTTSCEE--EE-ECT--------TTCCCTTSCHH------HH--HHHHHHHHHHHHTTTC--SEEEE
T ss_pred ccHHHHHHHHHHHCCCCCEE--Ee-cCC--------CCCCCCCCCHH------HH--HHHHHHHHHHHHHCCC--CEEEE
Confidence 45788899999999988762 11 111 12332112111 11 1235667788888887 34444
Q ss_pred EEEEeCHHHHHHHHHhCCCcEEEE
Q 022183 249 LNLISAPEGIHCVCKRFPSLKIVT 272 (301)
Q Consensus 249 ~~~vas~~gl~~l~~~~p~v~i~t 272 (301)
+|=-++.-+++.+.+++ ++.|+.
T Consensus 72 aCNTas~~~l~~lr~~~-~iPvig 94 (267)
T 2gzm_A 72 ACNTATAVVLEEMQKQL-PIPVVG 94 (267)
T ss_dssp CCHHHHHHHHHHHHHHC-SSCEEE
T ss_pred eCchhhHHHHHHHHHhC-CCCEEe
Confidence 44334444788888877 455554
No 197
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=21.99 E-value=1.2e+02 Score=23.49 Aligned_cols=43 Identities=21% Similarity=0.291 Sum_probs=31.9
Q ss_pred CCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHh
Q 022183 212 SERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKR 264 (301)
Q Consensus 212 ~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~gl~~l~~~ 264 (301)
+++.|++++ .+|.....|...|++.|. +++.. -..|+....++
T Consensus 55 ~~~~ivvyC---~~g~rs~~aa~~L~~~G~--~~v~~-----l~GG~~~W~~~ 97 (141)
T 3ilm_A 55 KSRDIYVYG---AGDEQTSQAVNLLRSAGF--EHVSE-----LKGGLAAWKAI 97 (141)
T ss_dssp TTSEEEEEC---SSHHHHHHHHHHHHHTTC--CSEEE-----CTTHHHHHHHT
T ss_pred CCCeEEEEE---CCChHHHHHHHHHHHcCC--CCEEE-----ecCHHHHHHHC
Confidence 356777775 488888899999999998 46643 25678877664
No 198
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=21.57 E-value=1.1e+02 Score=26.96 Aligned_cols=35 Identities=17% Similarity=0.299 Sum_probs=27.6
Q ss_pred CCCCcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEE
Q 022183 210 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLN 250 (301)
Q Consensus 210 ~i~~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~ 250 (301)
++++++|+|+= +|+...+++..|.+.|+ ++|.+++
T Consensus 124 ~l~~k~vlVlG----aGG~g~aia~~L~~~G~--~~v~i~~ 158 (283)
T 3jyo_A 124 NAKLDSVVQVG----AGGVGNAVAYALVTHGV--QKLQVAD 158 (283)
T ss_dssp TCCCSEEEEEC----CSHHHHHHHHHHHHTTC--SEEEEEC
T ss_pred CcCCCEEEEEC----CcHHHHHHHHHHHHCCC--CEEEEEE
Confidence 46789998764 68999999999999998 5676553
No 199
>3m95_A Autophagy related protein ATG8; alpha slash beta, receptor, transport protein; 2.40A {Bombyx mori} SCOP: d.15.1.3
Probab=21.45 E-value=91 Score=24.45 Aligned_cols=32 Identities=9% Similarity=0.334 Sum_probs=24.3
Q ss_pred HHHHHHHhCCC-cEEEEEeec----CCCCCCCeeecC
Q 022183 257 GIHCVCKRFPS-LKIVTSEID----VALNEEFRVIPG 288 (301)
Q Consensus 257 gl~~l~~~~p~-v~i~t~~iD----~~l~~~~~ivPG 288 (301)
-.+++.++||+ |.|++=... |.|+.+.|+||.
T Consensus 25 e~~~ir~kyP~rIPVIvEr~~~s~lP~LdK~KflVp~ 61 (125)
T 3m95_A 25 EGEKIRRKYPDRVPVIVEKAPKARLGDLDKKKYLVPS 61 (125)
T ss_dssp HHHHHHHHCTTEEEEEEEECTTCSSCCCSCCEEEEET
T ss_pred HHHHHHHHCCCeEEEEEEecCCCCCccccCCEEEcCC
Confidence 46788889998 666665443 578888999996
No 200
>4gmk_A Ribose-5-phosphate isomerase A; D-ribose-5-phosphate isomerase family, ribose 5-phosphate isomerisation; 1.72A {Lactobacillus salivarius}
Probab=21.24 E-value=88 Score=27.16 Aligned_cols=69 Identities=13% Similarity=0.176 Sum_probs=39.5
Q ss_pred cccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHH---------hCCCcEEEEEeecCCCCCCCeeecCCCch
Q 022183 222 VLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCK---------RFPSLKIVTSEIDVALNEEFRVIPGLGEF 292 (301)
Q Consensus 222 ~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~gl~~l~~---------~~p~v~i~t~~iD~~l~~~~~ivPGlGd~ 292 (301)
.+.||+|+..+++.|-++-.. +...+.++-+|...-+...+ ..|.+.++.-.-|+ +|.+...+-|-|-+
T Consensus 26 GlGTGSTv~~~i~~L~~~~~~-~~l~i~~V~tS~~t~~~a~~~Gi~l~~l~~~~~iD~~iDGADE-vd~~l~lIKGGGga 103 (228)
T 4gmk_A 26 GLGTGSTVKYMVDALGKRVNE-EGLDIVGVTTSIRTAEQAKSLGIVIKDIDEVDHIDLTIDGADE-ISSDFQGIKGGGAA 103 (228)
T ss_dssp EECCSHHHHHHHHHHHHHHHH-HCCCCEEEESSHHHHHHHHHTTCCBCCGGGSSCEEEEEECCSE-ECTTSCEECCTTSC
T ss_pred EECchHHHHHHHHHHHHHHhh-cCCcEEEEeCcHHHHHHHHHcCCceeChHHCCccceEeccHHH-hhhchhhhhcchHH
Confidence 678999999999998553211 12223344444443333332 23445666554443 46666788887754
No 201
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=20.15 E-value=45 Score=30.00 Aligned_cols=38 Identities=13% Similarity=0.107 Sum_probs=25.6
Q ss_pred EEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHH
Q 022183 216 VLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVC 262 (301)
Q Consensus 216 Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~~gl~~l~ 262 (301)
=+++||...||.|+.+|.+. |. .++++=..+..++-..
T Consensus 254 ~~VlDpF~GsGtt~~aa~~~----gr-----~~ig~e~~~~~~~~~~ 291 (323)
T 1boo_A 254 DLVVDIFGGSNTTGLVAERE----SR-----KWISFEMKPEYVAASA 291 (323)
T ss_dssp CEEEETTCTTCHHHHHHHHT----TC-----EEEEEESCHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHc----CC-----CEEEEeCCHHHHHHHH
Confidence 36899999999999988764 43 3455545555444333
No 202
>2jlj_A YSCU, YOP proteins translocation protein U; cell membrane, transmembrane, yersinia pesits, protein trans type III secretion system, membrane; 1.3A {Yersinia pestis} PDB: 2jlh_A* 2v5g_A 2w0r_A
Probab=20.07 E-value=88 Score=25.18 Aligned_cols=68 Identities=18% Similarity=0.180 Sum_probs=44.1
Q ss_pred ccccEeecCCCCCchhH-----------------HHHHHHHhhhccccccccCCCceeeccchHHHHHHh-hhhhcCCCC
Q 022183 54 KYADVIIPRGGDNHVAI-----------------DLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMH-TLIRDRGIS 115 (301)
Q Consensus 54 ~~ADiii~~~~~~~~~~-----------------~~i~~~i~~~l~~~~l~~~~~~v~vl~~~~~~~~~l-t~LRd~~T~ 115 (301)
..||+||-|.....+|+ +.+...|++.-.++ +|-+++++++++.|. +.=.+...|
T Consensus 45 ~~A~vvi~NPth~AVAL~Yd~~~~~AP~VvAKG~g~~A~~I~e~A~e~-------gVPi~e~~~LAr~Ly~~~~ig~~IP 117 (144)
T 2jlj_A 45 KRSSVVVAAATHIAIGILYKRGETPLPLVTFKYTDAQVQTVRKIAEEE-------GVPILQRIPLARALYWDALVDHYIP 117 (144)
T ss_dssp HTCSEEEEETTTEEEEEECCTTTCSSCEEEEEEETHHHHHHHHHHHHH-------TCCEEECHHHHHHHHHHCCTTSBCC
T ss_pred CCCCEEEECCCcEEEEEEeCCCCCCCCEEEEEeCCHHHHHHHHHHHHc-------CCCEEeCHHHHHHHHHhCCCCCccC
Confidence 68999998876655543 34445555544444 466788888888888 444577788
Q ss_pred hhhhHhhHHHHHH
Q 022183 116 KHDFVFYSDRLIR 128 (301)
Q Consensus 116 ~~~Fr~~~~rl~~ 128 (301)
...|+.-+.-|.+
T Consensus 118 ~ely~aVAeiLa~ 130 (144)
T 2jlj_A 118 AEQIEATAEVLRW 130 (144)
T ss_dssp GGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8777765554443
No 203
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=20.06 E-value=48 Score=29.95 Aligned_cols=68 Identities=25% Similarity=0.261 Sum_probs=38.1
Q ss_pred EEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeCH---HHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCch
Q 022183 216 VLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAP---EGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEF 292 (301)
Q Consensus 216 Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas~---~gl~~l~~~~p~v~i~t~~iD~~l~~~~~ivPGlGd~ 292 (301)
=+|+||...+|.|+.+|.+. |. .++++=..+ +-++-..++.-+ ++.+|.. .+-.++...-++
T Consensus 244 ~~vlDpF~GsGtt~~aa~~~----~r-----~~ig~e~~~~~~~~~~~~~~Rl~~----~~~~~~~--~~~~~~~~~~~~ 308 (319)
T 1eg2_A 244 STVLDFFAGSGVTARVAIQE----GR-----NSICTDAAPVFKEYYQKQLTFLQD----DGLIDKA--RSYEIVEGAANF 308 (319)
T ss_dssp CEEEETTCTTCHHHHHHHHH----TC-----EEEEEESSTHHHHHHHHHHHHC---------------CCEEEEECGGGT
T ss_pred CEEEecCCCCCHHHHHHHHc----CC-----cEEEEECCccHHHHHHHHHHHHHH----ccCCccc--ceeeecchHHHH
Confidence 37899999999999998875 42 344554555 444433333322 1233322 224566667777
Q ss_pred hhhccC
Q 022183 293 GDRYFG 298 (301)
Q Consensus 293 GdR~fg 298 (301)
.|+++-
T Consensus 309 ~~~~~~ 314 (319)
T 1eg2_A 309 GAALQR 314 (319)
T ss_dssp HHHHCC
T ss_pred HHHHhc
Confidence 777763
No 204
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=20.03 E-value=1.5e+02 Score=23.22 Aligned_cols=15 Identities=20% Similarity=0.377 Sum_probs=7.7
Q ss_pred CCCcEEEEEcccccc
Q 022183 211 ISERHVLLLDPVLAT 225 (301)
Q Consensus 211 i~~~~Vil~Dp~laT 225 (301)
....+|+|+|+--..
T Consensus 5 m~~~~iLivdd~~~~ 19 (184)
T 3rqi_A 5 MSDKNFLVIDDNEVF 19 (184)
T ss_dssp --CCEEEEECSCHHH
T ss_pred CCCCeEEEEcCCHHH
Confidence 344567777765443
No 205
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=20.00 E-value=2.7e+02 Score=23.63 Aligned_cols=54 Identities=13% Similarity=0.250 Sum_probs=36.3
Q ss_pred CcEEEEEcccccchHHHHHHHHHHHHcCCCCccEEEEEEEeC------HHHHHHHHHhCCCcEEEEEeec
Q 022183 213 ERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISA------PEGIHCVCKRFPSLKIVTSEID 276 (301)
Q Consensus 213 ~~~Vil~Dp~laTG~t~~~ai~~L~~~g~~~~~I~~~~~vas------~~gl~~l~~~~p~v~i~t~~iD 276 (301)
++..+|+||.- +. ..++.|++.|. +| -.++.+ -.|+..+.+++|+++||+..-+
T Consensus 28 ~~~~vlID~G~--~~---~i~~~l~~~g~---~i--~~Il~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~ 87 (258)
T 2qed_A 28 EGRCVIVDPGE--AA---PVLKAIAEHKW---MP--EAIFLTHHHHDHVGGVKELLQHFPQMTVYGPAET 87 (258)
T ss_dssp TSEEEEECCSC--HH---HHHHHHHHHTC---EE--EEEECCSCCHHHHTTHHHHHHHCTTCEEEECGGG
T ss_pred CCcEEEEeCCC--cH---HHHHHHHHcCC---CC--CEEEeCCCCccccCCHHHHHHHCCCCEEEecccc
Confidence 46789999873 23 34566666675 23 334433 3478889999999999987543
Done!